-- dump date 20140619_015046 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_106626.1 53717640 3094483 complement(1..1116) 1 NC_006350.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase 1116 3094483 BPSL0001 Burkholderia pseudomallei K96243 carboxylate-amine ligase YP_106626.1 1 R 272560 CDS YP_106627.1 53717641 3094484 complement(1161..2375) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein RSC3299 or RS02528 SWALL:Q8XU94 (EMBL:AL646074) (407 aa) fasta scores: E(): 2.8e-63, 43.31% id in 404 aa. N-terminus is weakly similar to the N-terminal region of Escherichia coli glutathione-regulated potassium-efflux system protein KefB or TrkB SWALL:KEFB_ECOLI (SWALL:P45522) (601 aa) fasta scores: E(): 0.0018, 26.94% id in 360 aa; hypothetical protein 2375 3094484 BPSL0002 Burkholderia pseudomallei K96243 hypothetical protein YP_106627.1 1161 R 272560 CDS YP_106628.2 161723216 3092684 complement(3114..5096) 1 NC_006350.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 5096 mnmC 3092684 mnmC Burkholderia pseudomallei K96243 5-methylaminomethyl-2-thiouridine methyltransferase YP_106628.2 3114 R 272560 CDS YP_106629.1 53717643 3091972 5488..5766 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei DNA-binding protein HU-alpha HupA or DbhA SWALL:DBHA_BURPS (SWALL:Q9ZF89) (92 aa) fasta scores: E(): 4.2e-29, 100% id in 92 aa. Similar to Ralstonia solanacearum probable DNA-binding protein HU-beta HupB2 or RSC2521 or RS01061 SWALL:Q8XWF3 (EMBL:AL646070) (94 aa) fasta scores: E(): 6.5e-17, 62.36% id in 93 aa; DNA-binding protein HU-alpha 5766 hupA 3091972 hupA Burkholderia pseudomallei K96243 DNA-binding protein HU-alpha YP_106629.1 5488 D 272560 CDS YP_106630.1 53717644 3092685 complement(5869..7209) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei hypothetical 49.5 kDa protein SWALL:Q9ZF88 (EMBL:AF110185) (447 aa) fasta scores: E(): 1.7e-175, 96.42% id in 447 aa. Similar to Ralstonia solanacearum hypothetical protein RSC0045 or RS01868 SWALL:Q8Y3D5 (EMBL:AL646057) (424 aa) fasta scores: E(): 1.2e-52, 57.84% id in 446 aa; cobalamin synthesis protein/P47K 7209 3092685 BPSL0005 Burkholderia pseudomallei K96243 cobalamin synthesis protein/P47K YP_106630.1 5869 R 272560 CDS YP_106631.1 53717645 3092172 complement(7528..8013) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei hypothetical 18.2 kDa protein SWALL:Q9ZF87 (EMBL:AF110185) (161 aa) fasta scores: E(): 3.1e-65, 99.37% id in 161 aa. Similar to Shigella flexneri IpgF protein precursor SWALL:IPGF_SHIFL (SWALL:Q07568) (152 aa) fasta scores: E(): 1.4e-12, 37.58% id in 141 aa; hypothetical protein 8013 3092172 BPSL0006 Burkholderia pseudomallei K96243 hypothetical protein YP_106631.1 7528 R 272560 CDS YP_106632.1 53717646 3091427 8395..10668 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei general secretory pathway protein D GspD SWALL:Q9ZF86 (EMBL:AF110185) (750 aa) fasta scores: E(): 0, 99.86% id in 750 aa. CDS is extended at the N-terminus in comparison to the previously sequenced protein. Similar to Erwinia chrysanthemi general secretion pathway protein D precursor OutD SWALL:GSPD_ERWCH (SWALL:P31700) (712 aa) fasta scores: E(): 2.5e-21, 33.23% id in 680 aa; general secretory pathway protein D 10668 gspD 3091427 gspD Burkholderia pseudomallei K96243 general secretory pathway protein D YP_106632.1 8395 D 272560 CDS YP_106633.1 53717647 3091428 10665..12158 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei general secretory pathway protein E GspE SWALL:Q9ZF85 (EMBL:AF110185) (497 aa) fasta scores: E(): 4.9e-168, 99.19% id in 497 aa. Similar to Erwinia carotovora general secretion pathway protein E OutE SWALL:GSPE_ERWCA (SWALL:P31703) (498 aa) fasta scores: E(): 2.9e-74, 53.09% id in 484 aa; general secretory pathway protein E 12158 gspE 3091428 gspE Burkholderia pseudomallei K96243 general secretory pathway protein E YP_106633.1 10665 D 272560 CDS YP_106634.1 53717648 3092853 12163..13380 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei general secretory pathway protein F GspF SWALL:Q9ZF84 (EMBL:AF110185) (405 aa) fasta scores: E(): 2.3e-145, 99.25% id in 405 aa. Similar to Erwinia carotovora general secretion pathway protein F OutF SWALL:GSPF_ERWCA (SWALL:P31705) (408 aa) fasta scores: E(): 9.6e-60, 43.1% id in 406 aa; general secretory pathway protein F 13380 gspF 3092853 gspF Burkholderia pseudomallei K96243 general secretory pathway protein F YP_106634.1 12163 D 272560 CDS YP_106635.1 53717649 3092040 complement(13452..13862) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei protein essential for the secretion of exoproducts GspC SWALL:Q9ZF83 (EMBL:AF110185) (136 aa) fasta scores: E(): 8.2e-48, 100% id in 136 aa. Similar to the N-terminal region of Ralstonia solanacearum general secretion pathway related transmembrane protein GspC or RSC3105 or RS00558 SWALL:Q8XUT0 (EMBL:AL646073) (228 aa) fasta scores: E(): 8.9e-12, 42.33% id in 137 aa; general secretory pathway protein 13862 gspC 3092040 gspC Burkholderia pseudomallei K96243 general secretory pathway protein YP_106635.1 13452 R 272560 CDS YP_106636.1 53717650 3092989 14010..14462 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei general secretory pathway protein G GspG SWALL:Q9ZF82 (EMBL:AF110185) (150 aa) fasta scores: E(): 2.1e-58, 100% id in 150 aa. Similar to Erwinia carotovora general secretion pathway protein G precursor OutG SWALL:GSPG_ERWCA (SWALL:P31586) (156 aa) fasta scores: E(): 2.5e-27, 53.57% id in 140 aa; general secretory pathway protein G 14462 gspG 3092989 gspG Burkholderia pseudomallei K96243 general secretory pathway protein G YP_106636.1 14010 D 272560 CDS YP_106637.1 53717651 3092990 14617..15096 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei general secretory pathway protein H GspH SWALL:Q9ZF81 (EMBL:AF110185) (159 aa) fasta scores: E(): 4.1e-60, 100% id in 159 aa. Similar to Erwinia carotovora general secretion pathway protein G precursor OutG SWALL:GSPG_ERWCA (SWALL:P31586) (156 aa) fasta scores: E(): 0.38, 29.73% id in 111 aa; general secretory pathway protein H 15096 gspH 3092990 gspH Burkholderia pseudomallei K96243 general secretory pathway protein H YP_106637.1 14617 D 272560 CDS YP_106638.1 53717652 3092326 15099..15503 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei general secretory pathway protein I GspI SWALL:Q9ZF80 (EMBL:AF110185) (134 aa) fasta scores: E(): 1.1e-49, 100% id in 134 aa. Similar to Pseudomonas aeruginosa general secretion pathway protein I precursor XcpV or PddC SWALL:GSPI_PSEAE (SWALL:Q00516) (129 aa) fasta scores: E(): 0.00019, 37% id in 100 aa; general secretory pathway protein I 15503 gspI 3092326 gspI Burkholderia pseudomallei K96243 general secretory pathway protein I YP_106638.1 15099 D 272560 CDS YP_106639.1 53717653 3092327 15481..16209 1 NC_006350.1 N-terminal region is identical to the previously sequenced Burkholderia pseudomallei general secretory pathway protein J GspJ SWALL:Q9ZF79 (EMBL:AF110185) (217 aa) fasta scores: E(): 3.3e-70, 100% id in 192 aa. CDS differs from the previously sequenced protein in the C-terminal region. C-terminal region is similar to Burkholderia cepacia general secretory pathway protein GspJ SWALL:Q9F1P4 (EMBL:AB050004) (222 aa) fasta scores: E(): 3e-60, 75.67% id in 222 aa; general secretory pathway protein J 16209 gspJ 3092327 gspJ Burkholderia pseudomallei K96243 general secretory pathway protein J YP_106639.1 15481 D 272560 CDS YP_106640.1 53717654 3094007 16391..17461 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei general secretory pathway protein K GspK SWALL:Q9ZF78 (EMBL:AF110185) (356 aa) fasta scores: E(): 9.2e-126, 99.15% id in 356 aa. Similar to Erwinia carotovora general secretion pathway protein K OutK SWALL:GSPK_ERWCA (SWALL:P31706) (328 aa) fasta scores: E(): 0.59, 24.63% id in 345 aa; general secretory pathway protein K 17461 gspK 3094007 gspK Burkholderia pseudomallei K96243 general secretory pathway protein K YP_106640.1 16391 D 272560 CDS YP_106641.1 53717655 3093877 17486..18916 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei general secretory pathway protein L GspL SWALL:Q9ZF77 (EMBL:AF110185) (444 aa) fasta scores: E(): 3.1e-79, 95.67% id in 462 aa. CDS is extended at the N-terminus in comparison to the previously sequenced protein. CDS also contains extra internal amino acid residues (229 to 246) relative to the previously sequenced protein. C-terminal region is similar to Pseudomonas aeruginosa general secretion pathway protein L XcpY SWALL:GSPL_PSEAE (SWALL:P25060) (382 aa) fasta scores: E(): 0.75, 24.33% id in 378 aa; general secretory pathway protein L 18916 gspL 3093877 gspL Burkholderia pseudomallei K96243 general secretory pathway protein L YP_106641.1 17486 D 272560 CDS YP_106642.1 53717656 3093878 18913..19419 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei general secretory pathway protein M GspM SWALL:Q9ZF76 (EMBL:AF110185) (168 aa) fasta scores: E(): 3.3e-58, 100% id in 168 aa. Similar to Erwinia carotovora general secretion pathway protein M OutM SWALL:GSPM_ERWCA (SWALL:P31709) (164 aa) fasta scores: E(): 0.00098, 26.58% id in 158 aa; general secretory pathway protein M 19419 gspM 3093878 gspM Burkholderia pseudomallei K96243 general secretory pathway protein M YP_106642.1 18913 D 272560 CDS YP_106643.1 53717657 3093630 19458..20249 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei general secretory pathway protein N GspN SWALL:Q9ZF75 (EMBL:AF110185) (263 aa) fasta scores: E(): 1e-102, 100% id in 263 aa. Similar to Aeromonas hydrophila general secretion pathway protein N ExeN SWALL:GSPN_AERHY (SWALL:P41852) (252 aa) fasta scores: E(): 1.1, 24.8% id in 250 aa; general secretory pathway protein N 20249 gspN 3093630 gspN Burkholderia pseudomallei K96243 general secretory pathway protein N YP_106643.1 19458 D 272560 CDS YP_106644.1 53717658 3092173 complement(20480..22135) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei hypothetical 56.3 kDa protein SWALL:Q9ZF74 (EMBL:AF110185) (541 aa) fasta scores: E(): 5e-157, 98% id in 551 aa. CDS contains extra internal amino acid residues (514 to 524) relative to the previously sequenced protein. Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 3.8e-33, 34.73% id in 501 aa; outer membrane efflux lipoprotein 22135 3092173 BPSL0019 Burkholderia pseudomallei K96243 outer membrane efflux lipoprotein YP_106644.1 20480 R 272560 CDS YP_106645.1 53717659 3091507 complement(22357..22629) 1 NC_006350.1 No significant database matches. Possible alternative upstream translational start site; hypothetical protein 22629 3091507 BPSL0020 Burkholderia pseudomallei K96243 hypothetical protein YP_106645.1 22357 R 272560 CDS YP_106646.1 53717660 3091508 22828..23319 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei hypothetical 18.0 kDa protein SWALL:Q9ZF73 (EMBL:AF110185) (163 aa) fasta scores: E(): 3.8e-58, 99.38% id in 163 aa. Similar to Escherichia coli multiple antibiotic resistance protein MarR or SoxQ or CfxB or InaR SWALL:MARR_ECOLI (SWALL:P27245) (144 aa) fasta scores: E(): 9.1e-08, 35.38% id in 130 aa; MarR family transcriptional regulator 23319 3091508 BPSL0021 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_106646.1 22828 D 272560 CDS YP_106647.1 53717661 3091830 23466..25028 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei hypothetical 55.5 kDa protein SWALL:Q9ZF72 (EMBL:AF110185) (520 aa) fasta scores: E(): 3e-195, 99.8% id in 520 aa. Similar to Escherichia coli multidrug resistance protein B EmrB SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 2.3e-105, 53.17% id in 504 aa. Similar to BPSS0538, 56.736% identity (57.834% ungapped) in 527 aa overlap ; BPSS1350, 56.546% identity (57.640% ungapped) in 527 aa overlap and to BPSL1915, 51.303% identity (51.303% ungapped) in 499 aa overlap; transporter protein 25028 3091830 BPSL0022 Burkholderia pseudomallei K96243 transporter protein YP_106647.1 23466 D 272560 CDS YP_106648.1 53717662 3091831 complement(25088..26011) 1 NC_006350.1 Similar to Bacillus subtilis transcriptional regulatory protein GltC SWALL:GLTC_BACSU (SWALL:P20668) (300 aa) fasta scores: E(): 9.8e-21, 31.13% id in 273 aa, and to Salmonella typhimurium LysR family transcriptional regulator STM4270 SWALL:Q8ZKG0 (EMBL:AE008900) (295 aa) fasta scores: E(): 2.4e-47, 47.55% id in 286 aa; LysR family transcriptional regulator 26011 3091831 BPSL0023 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_106648.1 25088 R 272560 CDS YP_106649.1 53717663 3093775 26223..26621 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein PA3432 SWALL:Q9HYH3 (EMBL:AE004764) (129 aa) fasta scores: E(): 5e-16, 46.78% id in 109 aa, and to Vibrio cholerae hypothetical protein VC2101 SWALL:Q9KQ99 (EMBL:AE004284) (146 aa) fasta scores: E(): 9.1e-13, 41.32% id in 121 aa; LrgA family protein 26621 3093775 BPSL0024 Burkholderia pseudomallei K96243 LrgA family protein YP_106649.1 26223 D 272560 CDS YP_106650.1 53717664 3093776 26690..27412 1 NC_006350.1 Similar to Vibrio cholerae hypothetical protein VC2100 SWALL:Q9KQA0 (EMBL:AE004284) (229 aa) fasta scores: E(): 1.1e-42, 52.48% id in 221 aa, and to Salmonella typhi membrane protein STY4470 SWALL:Q8Z1R3 (EMBL:AL627282) (229 aa) fasta scores: E(): 4e-39, 48.87% id in 223 aa; hypothetical protein 27412 3093776 BPSL0025 Burkholderia pseudomallei K96243 hypothetical protein YP_106650.1 26690 D 272560 CDS YP_106651.2 161723215 3091889 28205..28747 1 NC_006350.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body protein FliL 28747 fliL 3091889 fliL Burkholderia pseudomallei K96243 flagellar basal body protein FliL YP_106651.2 28205 D 272560 CDS YP_106652.1 53717666 3092027 28770..29768 1 NC_006350.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 29768 fliM 3092027 fliM Burkholderia pseudomallei K96243 flagellar motor switch protein FliM YP_106652.1 28770 D 272560 CDS YP_106653.1 53717667 3092028 29761..30258 1 NC_006350.1 Similar to Ralstonia solanacearum probable flagellar motor switch protein RSP0377 or RS00805 SWALL:Q8XSU0 (EMBL:AL646078) (156 aa) fasta scores: E(): 4.9e-26, 61.07% id in 167 aa> C-terminal region is similar to Erwinia carotovora flagellar motor switch protein FliN or MopA SWALL:FLIN_ERWCA (SWALL:P35539) (106 aa) fasta scores: E(): 1.4e-21, 67.3% id in 104 aa. Possible alternative translational start site; flagellar motor switch protein 30258 fliN 3092028 fliN Burkholderia pseudomallei K96243 flagellar motor switch protein YP_106653.1 29761 D 272560 CDS YP_106654.1 53717668 3093248 30426..30920 1 NC_006350.1 Similar to Escherichia coli flagellar protein FliO or FlbD or FlaP SWALL:FLIO_ECOLI (SWALL:P22586) (121 aa) fasta scores: E(): 1.1e-05, 43% id in 100 aa, and to Erwinia carotovora MopB protein SWALL:MOPB_ERWCA (SWALL:P34199) (140 aa) fasta scores: E(): 3.6e-05, 38.31% id in 107 aa; flagellar protein 30920 fliO 3093248 fliO Burkholderia pseudomallei K96243 flagellar protein YP_106654.1 30426 D 272560 CDS YP_106655.1 53717669 3092828 30991..31752 1 NC_006350.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 31752 fliP 3092828 fliP Burkholderia pseudomallei K96243 flagellar biosynthesis protein FliP YP_106655.1 30991 D 272560 CDS YP_106656.1 53717670 3092829 31778..32050 1 NC_006350.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 32050 fliQ 3092829 fliQ Burkholderia pseudomallei K96243 flagellar biosynthesis protein FliQ YP_106656.1 31778 D 272560 CDS YP_106657.1 53717671 3091494 32169..32951 1 NC_006350.1 Similar to Escherichia coli flagellar biosynthetic protein FliR or FlaP SWALL:FLIR_ECOLI (SWALL:P33135) (261 aa) fasta scores: E(): 4.8e-40, 47.75% id in 245 aa, and to Erwinia carotovora flagellar biosynthetic protein FliR or MopE SWALL:FLIR_ERWCA (SWALL:P34202) (261 aa) fasta scores: E(): 7.2e-42, 47.45% id in 255 aa; flagellar biosynthetic protein 32951 fliR 3091494 fliR Burkholderia pseudomallei K96243 flagellar biosynthetic protein YP_106657.1 32169 D 272560 CDS YP_106658.1 53717672 3091890 complement(33271..33699) 1 NC_006350.1 Similar to Rhizobium leguminosarum transcriptional regulator HmrR SWALL:HMMR_RHILV (SWALL:Q9X5V4) (129 aa) fasta scores: E(): 1.2e-06, 33.33% id in 132 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA5116 SWALL:Q9HU68 (EMBL:AE004924) (141 aa) fasta scores: E(): 3.3e-33, 72.66% id in 139 aa; MerR family transcriptional regulator 33699 3091890 BPSL0033 Burkholderia pseudomallei K96243 MerR family transcriptional regulator YP_106658.1 33271 R 272560 CDS YP_106659.1 53717673 3092235 33781..34656 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein MLR5379 SWALL:Q98BY2 (EMBL:AP003006) (281 aa) fasta scores: E(): 3.2e-50, 51.29% id in 271 aa, and to Caulobacter crescentus methlytransferase, UbiE-Coq5 family CC3495 SWALL:Q9A2R1 (EMBL:AE006008) (276 aa) fasta scores: E(): 2.6e-42, 46.46% id in 269 aa; hypothetical protein 34656 3092235 BPSL0034 Burkholderia pseudomallei K96243 hypothetical protein YP_106659.1 33781 D 272560 CDS YP_106660.1 53717674 3092236 34649..35170 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein MLL7507 SWALL:Q985V9 (EMBL:AP003012) (167 aa) fasta scores: E(): 3.4e-18, 42.46% id in 146 aa, and to Agrobacterium tumefaciens hypothetical protein ATU2174 or AGR_C_3945 SWALL:Q8UDF3 (EMBL:AE009168) (169 aa) fasta scores: E(): 1.8e-16, 37.5% id in 144 aa; hypothetical protein 35170 3092236 BPSL0035 Burkholderia pseudomallei K96243 hypothetical protein YP_106660.1 34649 D 272560 CDS YP_106661.1 53717675 3094577 35328..36341 1 NC_006350.1 Similar to Rhizobium loti ABC transporter substrate-binding protein MLR7949 SWALL:Q984L7 (EMBL:AP003013) (337 aa) fasta scores: E(): 4e-65, 60.85% id in 327 aa, and to Ralstonia solanacearum hypothetical signal peptide protein rsc3391 or rs05672 SWALL:Q8XU03 (EMBL:AL646075) (328 aa) fasta scores: E(): 8.4e-68, 60.63% id in 315 aa; transport protein 36341 3094577 BPSL0036 Burkholderia pseudomallei K96243 transport protein YP_106661.1 35328 D 272560 CDS YP_106662.1 53717676 3094578 36425..37222 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1199 or rs02665 SWALL:Q8Y045 (EMBL:AL646063) (270 aa) fasta scores: E(): 1.5e-46, 54.44% id in 259 aa, and to the C-terminal region of Rhizobium loti ABC transporter ATP-binding protein mlr7950 SWALL:Q984L6 (EMBL:AP003013) (300 aa) fasta scores: E(): 9.9e-67, 72.97% id in 259 aa; ATP-binding ABC transporter protein 37222 3094578 BPSL0037 Burkholderia pseudomallei K96243 ATP-binding ABC transporter protein YP_106662.1 36425 D 272560 CDS YP_106663.1 53717677 3094681 37241..38098 1 NC_006350.1 Similar to Rhizobium loti ABC transporter permease mlr7951 SWALL:Q984L5 (EMBL:AP003013) (292 aa) fasta scores: E(): 7.7e-64, 60.96% id in 269 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu4260 or agr_l_1202 SWALL:Q8U839 (EMBL:AE009355) (265 aa) fasta scores: E(): 7.8e-39, 45.93% id in 246 aa; binding-protein-dependent transport systems inner membrane component 38098 3094681 BPSL0038 Burkholderia pseudomallei K96243 binding-protein-dependent transport systems inner membrane component YP_106663.1 37241 D 272560 CDS YP_106664.1 53717678 3094682 38176..39555 1 NC_006350.1 Two-component regulatory system family, sensor kinase. Similar to Escherichia coli sensor protein QseC SWALL:QSEC_ECOLI (SWALL:P40719) (449 aa) fasta scores: E(): 7.1e-23, 28.06% id in 449 aa, and to Rhizobium loti two-component system, sensor protein mll7952 SWALL:Q984L4 (EMBL:AP003013) (452 aa) fasta scores: E(): 3.7e-56, 41.75% id in 455 aa; sensor kinase 39555 3094682 BPSL0039 Burkholderia pseudomallei K96243 sensor kinase YP_106664.1 38176 D 272560 CDS YP_106665.1 53717679 3093986 39566..40243 1 NC_006350.1 Two-component regulatory system family, response regulator protein. Similar to Salmonella typhimurium transcriptional regulatory protein TctD SWALL:TCTD_SALTY (SWALL:P22104) (224 aa) fasta scores: E(): 2.9e-35, 48.43% id in 223 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc3392 or rs05673 SWALL:Q8XU02 (EMBL:AL646075) (224 aa) fasta scores: E(): 1.5e-47, 58.44% id in 219 aa; response regulator protein 40243 3093986 BPSL0040 Burkholderia pseudomallei K96243 response regulator protein YP_106665.1 39566 D 272560 CDS YP_106666.1 53717680 3093987 40566..41693 1 NC_006350.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.8e-13, 28.26% id in 414 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsc3390 or rs05671 SWALL:Q8XU04 (EMBL:AL646075) (376 aa) fasta scores: E(): 6.2e-77, 54.33% id in 381 aa; outer membrane porin lipoprotein 41693 3093987 BPSL0041 Burkholderia pseudomallei K96243 outer membrane porin lipoprotein YP_106666.1 40566 D 272560 CDS YP_106667.1 53717681 3092538 42169..44181 1 NC_006350.1 Similar to Escherichia coli type III restriction-modification system EcoP15I enzyme Mod SWALL:T3MO_ECOLI (SWALL:P12364) (645 aa) fasta scores: E(): 3.5e-39, 30.38% id in 655 aa, and to Chlorobium tepidum TLS type III restriction system methylase Mod SWALL:AAM72143 (EMBL:AE012856) (669 aa) fasta scores: E(): 1.7e-190, 67.66% id in 671 aa; type III restriction-modification system methylase 44181 3092538 BPSL0042 Burkholderia pseudomallei K96243 type III restriction-modification system methylase YP_106667.1 42169 D 272560 CDS YP_106668.1 53717682 3092539 44222..47251 1 NC_006350.1 Similar to Chlorobium tepidum TLS type III restriction system endonuclease Res SWALL:AAM72146 (EMBL:AE012856) (991 aa) fasta scores: E(): 0, 66.83% id in 998 aa, and to Fusobacterium nucleatum type III restriction-modification system restriction subunit FN0417 SWALL:Q8RG91 (EMBL:AE010553) (997 aa) fasta scores: E(): 1.1e-151, 43.51% id in 1002 aa; type III restriction system endonuclease 47251 3092539 BPSL0043 Burkholderia pseudomallei K96243 type III restriction system endonuclease YP_106668.1 44222 D 272560 CDS YP_106669.1 53717683 3093858 47789..48889 1 NC_006350.1 Similar to Burkholderia cepacia major porin protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 1.4e-22, 38.08% id in 386 aa, and to Ralstonia solanacearum probable porin precursor transmembrane protein rsp0337 or rs00714 SWALL:Q8XSY0 (EMBL:AL646078) (351 aa) fasta scores: E(): 1.2e-18, 34.13% id in 331 aa; outer membrane porin 48889 3093858 BPSL0044 Burkholderia pseudomallei K96243 outer membrane porin YP_106669.1 47789 D 272560 CDS YP_106670.1 53717684 3093859 49289..50248 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa4070 SWALL:Q9HWV8 (EMBL:AE004823) (316 aa) fasta scores: E(): 1.1e-17, 30.39% id in 306 aa. C-terminus is similar to the C-terminal region of Escherichia coli transcriptional activator FeaR or MaoR or MaoB SWALL:FEAR_ECOLI (SWALL:Q47129) (301 aa) fasta scores: E(): 9.5e-14, 30.61% id in 245 aa; AraC family transcriptional regulator 50248 3093859 BPSL0045 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_106670.1 49289 D 272560 CDS YP_106671.1 53717685 3092441 complement(50371..51102) 1 NC_006350.1 Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 6.3e-22, 39.35% id in 216 aa, and to Brucella melitensis high-affinity branched-chain amino acid transport ATP-binding protein bmeii0119 SWALL:Q8YDQ6 (EMBL:AE009650) (234 aa) fasta scores: E(): 2.3e-24, 39.73% id in 229 aa; ABC transport system ATP-binding protein 51102 3092441 BPSL0046 Burkholderia pseudomallei K96243 ABC transport system ATP-binding protein YP_106671.1 50371 R 272560 CDS YP_106672.1 53717686 3092442 complement(51475..52197) 1 NC_006350.1 Similar to Rhizobium meliloti high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein R02584 or smc02357 SWALL:Q92MM9 (EMBL:AL591791) (244 aa) fasta scores: E(): 2.1e-18, 37.44% id in 235 aa, and to Rhizobium loti branched-chain amino acid ABC transporter ATP-binding protein mll4886 SWALL:Q98D29 (EMBL:AP003005) (241 aa) fasta scores: E(): 2.6e-17, 37.23% id in 239 aa; ABC transport system ATP-binding protein 52197 3092442 BPSL0047 Burkholderia pseudomallei K96243 ABC transport system ATP-binding protein YP_106672.1 51475 R 272560 CDS YP_106673.1 53717687 3092017 complement(52194..53243) 1 NC_006350.1 Similar to Aeropyrum pernix hypothetical high-affinity branched-chain amino acid transport permease APE1304 SWALL:Q9YCF3 (EMBL:AP000061) (349 aa) fasta scores: E(): 1.8e-10, 26.99% id in 326 aa. C-terminal region is similar to the N-terminal region of Brucella melitensis high-affinity branched-chain amino acid transport system permease LivM / high-affinity branched-chain amino acid transport ATP-binding protein LivG bmeii0120 SWALL:Q8YDQ5 (EMBL:AE009650) (515 aa) fasta scores: E(): 2.8e-13, 34.29% id in 277 aa; hypothetical protein 53243 3092017 BPSL0048 Burkholderia pseudomallei K96243 hypothetical protein YP_106673.1 52194 R 272560 CDS YP_106674.1 53717688 3092018 complement(53240..54118) 1 NC_006350.1 Similar to Brucella melitensis high-affinity branched-chain amino acid transport system permease bmeii0121 SWALL:Q8YDQ4 (EMBL:AE009650) (292 aa) fasta scores: E(): 1.3e-19, 30.99% id in 271 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu5524 or agr_pat_780 SWALL:Q8UJF3 (EMBL:AE008972) (298 aa) fasta scores: E(): 6.4e-16, 28.36% id in 282 aa; branched-chain amino acid transport system permease 54118 3092018 BPSL0049 Burkholderia pseudomallei K96243 branched-chain amino acid transport system permease YP_106674.1 53240 R 272560 CDS YP_106675.1 53717689 3094741 complement(54123..55382) 1 NC_006350.1 N-terminus is weakly similar to N-terminal regions of Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 0.0088, 22.61% id in 367 aa, and to Ralstonia solanacearum probable leu/ile/val-binding signal peptide protein rsc2864 or rs00241 SWALL:Q8XVG7 (EMBL:AL646072) (385 aa) fasta scores: E(): 2.9e-05, 25% id in 360 aa. CDS is a possible lipoprotein, but has a poor N-terminal signal sequence; hypothetical protein 55382 3094741 BPSL0050 Burkholderia pseudomallei K96243 hypothetical protein YP_106675.1 54123 R 272560 CDS YP_106676.1 53717690 3094742 complement(55599..57104) 1 NC_006350.1 Similar to Escherichia coli phenylacetaldehyde dehydrogenase FeaB or PadA or MaoB SWALL:FEAB_ECOLI (SWALL:P80668) (499 aa) fasta scores: E(): 2.5e-88, 49.79% id in 498 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa4073 SWALL:Q9HWV5 (EMBL:AE004823) (495 aa) fasta scores: E(): 1.1e-114, 62.29% id in 488 aa. Similar to BPSS0868, 59.714% identity (60.707% ungapped) in 489 aa overlap. Similar to BPSS0868, 59.714% identity (60.707% ungapped) in 489 aa overlap; phenylacetaldehyde dehydrogenase 57104 3094742 BPSL0051 Burkholderia pseudomallei K96243 phenylacetaldehyde dehydrogenase YP_106676.1 55599 R 272560 CDS YP_106677.1 53717691 3093596 complement(57160..57552) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1817 SWALL:Q9I2S8 (EMBL:AE004608) (129 aa) fasta scores: E(): 5e-26, 56.69% id in 127 aa, and to Agrobacterium tumefaciens hypothetical protein atu4878 or agr_l_27 SWALL:Q8U6C9 (EMBL:AE009416) (137 aa) fasta scores: E(): 0.002, 23.84% id in 130 aa; hypothetical protein 57552 3093596 BPSL0052 Burkholderia pseudomallei K96243 hypothetical protein YP_106677.1 57160 R 272560 CDS YP_106678.1 53717692 3093597 complement(57563..58372) 1 NC_006350.1 Similar to Klebsiella aerogenes MoaF protein precursor SWALL:MOAF_KLEAE (SWALL:P54796) (262 aa) fasta scores: E(): 1.3e-16, 31.81% id in 242 aa, and to Pseudomonas aeruginosa hypothetical protein pa4087 SWALL:Q9HWU1 (EMBL:AE004825) (274 aa) fasta scores: E(): 1.2e-16, 31.95% id in 266 aa; hypothetical protein 58372 3093597 BPSL0053 Burkholderia pseudomallei K96243 hypothetical protein YP_106678.1 57563 R 272560 CDS YP_106679.1 53717693 3093902 complement(58418..59215) 1 NC_006350.1 Similar to Klebsiella aerogenes MoaE protein SWALL:MOAE_KLEAE (SWALL:P54795) (257 aa) fasta scores: E(): 8.1e-33, 46.18% id in 262 aa, and to Escherichia coli oxidoreductase UcpA SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) fasta scores: E(): 3.2e-22, 36.68% id in 259 aa; short chain dehydrogenase 59215 3093902 BPSL0054 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_106679.1 58418 R 272560 CDS YP_106680.1 53717694 3093903 complement(59300..60970) 1 NC_006350.1 Similar to Pseudomonas oleovorans alcohol dehydrogenase [acceptor] AlkJ or AlcO SWALL:ALKJ_PSEOL (SWALL:Q00593) (558 aa) fasta scores: E(): 6.6e-88, 45.17% id in 549 aa, and to Rhizobium loti probable dehydrogenase mll1008 SWALL:Q98LI5 (EMBL:AP002996) (537 aa) fasta scores: E(): 2.7e-92, 46.45% id in 536 aa; glucose-methanol-choline (GMC) oxidoreductase 60970 3093903 BPSL0055 Burkholderia pseudomallei K96243 glucose-methanol-choline (GMC) oxidoreductase YP_106680.1 59300 R 272560 CDS YP_106681.1 53717695 3093581 61697..62038 1 NC_006350.1 Similar to Clostridium acetobutylicum predicted transcriptional regulator cac0571 SWALL:Q97LI9 (EMBL:AE007572) (107 aa) fasta scores: E(): 1.3e-20, 57% id in 100 aa, and to Caulobacter crescentus hypothetical protein CC3408 SWALL:Q9A2Z8 (EMBL:AE006001) (108 aa) fasta scores: E(): 2.1e-20, 57% id in 100 aa; PadR-like family transcriptional regulator 62038 3093581 BPSL0056 Burkholderia pseudomallei K96243 PadR-like family transcriptional regulator YP_106681.1 61697 D 272560 CDS YP_106682.1 53717696 3093582 62035..63222 1 NC_006350.1 No significant database matches to the full length CDS. N-terminus is similar to the N-terminal regions of Caulobacter crescentus hypothetical protein CC3409 SWALL:Q9A2Z7 (EMBL:AE006001) (187 aa) fasta scores: E(): 1.9e-11, 37.93% id in 145 aa, and Listeria innocua hypothetical protein lin0609 SWALL:Q92E52 (EMBL:AL596165) (196 aa) fasta scores: E(): 0.057, 27.27% id in 176 aa; hypothetical protein 63222 3093582 BPSL0057 Burkholderia pseudomallei K96243 hypothetical protein YP_106682.1 62035 D 272560 CDS YP_106683.1 53717697 3091707 complement(63895..64881) 1 NC_006350.1 Similar to Synechocystis sp. fatty acid desaturase DesA SWALL:DESA_SYNY3 (SWALL:P20388) (351 aa) fasta scores: E(): 3.3e-05, 23.58% id in 335 aa, and to Caulobacter crescentus hypothetical protein CC3422 SWALL:Q9A2Y4 (EMBL:AE006002) (329 aa) fasta scores: E(): 1.5e-20, 40% id in 330 aa; fatty acid desaturase 64881 3091707 BPSL0058 Burkholderia pseudomallei K96243 fatty acid desaturase YP_106683.1 63895 R 272560 CDS YP_106684.1 53717698 3091708 complement(64911..65747) 1 NC_006350.1 Poor database matches. Weakly similar to Sulfolobus solfataricus ring oxydation complex/ phenylacetic acid degradation related protein SSO2022 SWALL:Q97WU2 (EMBL:AE006809) (266 aa) fasta scores: E(): 0.0008, 23% id in 226 aa; hypothetical protein 65747 3091708 BPSL0059 Burkholderia pseudomallei K96243 hypothetical protein YP_106684.1 64911 R 272560 CDS YP_106685.1 53717699 3094177 complement(66187..67281) 1 NC_006350.1 Similar to Streptomyces coelicolor transcriptional regulator sco6746 or SC5f2A.29 SWALL:Q9X7Q2 (EMBL:AL049587) (325 aa) fasta scores: E(): 1.5e-15, 31.15% id in 337 aa, and to Xanthomonas axonopodis pv. citri str. 306 transcriptional regulator AraC family AdpA SWALL:AAM38899 (EMBL:AE012054) (336 aa) fasta scores: E(): 2.8e-14, 29.73% id in 333 aa; AraC family transcriptional regulator 67281 3094177 BPSL0060 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_106685.1 66187 R 272560 CDS YP_106686.1 53717700 3094178 67394..68530 1 NC_006350.1 Similar to the C-terminal region of Homo sapiens acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor ACADL SWALL:ACDL_HUMAN (SWALL:P28330) (430 aa) fasta scores: E(): 3.3e-80, 54.64% id in 377 aa, and to the full length Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa4435 SWALL:Q9HVY0 (EMBL:AE004858) (381 aa) fasta scores: E(): 1.2e-108, 69.84% id in 378 aa; acyl-CoA dehydrogenase 68530 3094178 BPSL0061 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_106686.1 67394 D 272560 CDS YP_106687.1 53717701 3093660 69196..70401 1 NC_006350.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 70401 3093660 BPSL0062 Burkholderia pseudomallei K96243 acetyl-CoA acetyltransferase YP_106687.1 69196 D 272560 CDS YP_106688.1 53717702 3093661 70414..72537 1 NC_006350.1 Similar to Pseudomonas fragi fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3- hydroxybutyryl-CoA epimerase] FaoA SWALL:FAOB_PSEFR (SWALL:P28793) (715 aa) fasta scores: E(): 5e-65, 36.06% id in 721 aa, and to Caulobacter crescentus fatty oxidation complex, alpha subunit CC0076 SWALL:Q9ABZ4 (EMBL:AE005681) (709 aa) fasta scores: E(): 8.9e-130, 55.26% id in 684 aa; fatty oxidation complex subunit alpha 72537 3093661 BPSL0063 Burkholderia pseudomallei K96243 fatty oxidation complex subunit alpha YP_106688.1 70414 D 272560 CDS YP_106689.1 53717703 3094272 72925..74058 1 NC_006350.1 Similar to Homo sapiens alpha-methylacyl-CoA racemase AMACR SWALL:AMAC_HUMAN (SWALL:Q9UHK6) (382 aa) fasta scores: E(): 1.9e-50, 41.17% id in 374 aa, and to Rhizobium loti probable fatty acid CoA racemase mlr2316 SWALL:Q98IP3 (EMBL:AP002999) (389 aa) fasta scores: E(): 1e-77, 57.89% id in 380 aa; alpha-methylacyl-CoA racemase 74058 3094272 BPSL0064 Burkholderia pseudomallei K96243 alpha-methylacyl-CoA racemase YP_106689.1 72925 D 272560 CDS YP_106690.1 53717704 3094273 complement(74135..74701) 1 NC_006350.1 Poor database matches. Similar to an internal region of Thermotoga maritima chaperonin TM1394 SWALL:HSLO_THEMA (SWALL:Q9X1B4) (290 aa) fasta scores: E(): 6.9, 26.94% id in 167 aa; lipoprotein 74701 3094273 BPSL0065 Burkholderia pseudomallei K96243 lipoprotein YP_106690.1 74135 R 272560 CDS YP_106691.1 53717705 3091815 complement(75037..75501) 1 NC_006350.1 Poor database matches. Similar to Ralstonia solanacearum probable lipoprotein rsc2710 or rs00012 SWALL:Q8XVW7 (EMBL:AL646071) (146 aa) fasta scores: E(): 4.9e-15, 44.37% id in 151 aa; hypothetical protein 75501 3091815 BPSL0066 Burkholderia pseudomallei K96243 hypothetical protein YP_106691.1 75037 R 272560 CDS YP_106692.1 53717706 3091816 76057..76497 1 NC_006350.1 Poor database matches. C-terminal region is similar to Salmonella typhi hypothetical protein STY0300 SWALL:Q8Z969 (EMBL:AL627266) (133 aa) fasta scores: E(): 0.0034, 33.91% id in 115 aa; hypothetical protein 76497 3091816 BPSL0067 Burkholderia pseudomallei K96243 hypothetical protein YP_106692.1 76057 D 272560 CDS YP_106693.1 53717707 3093713 76484..76852 1 NC_006350.1 Poor database matches. Similar to the N-terminus of Streptomyces coelicolor membrane protein sco0399 or SCF62.25 SWALL:Q9RJI9 (EMBL:AL121855) (407 aa) fasta scores: E(): 6, 34.95% id in 103 aa; lipoprotein 76852 3093713 BPSL0068 Burkholderia pseudomallei K96243 lipoprotein YP_106693.1 76484 D 272560 CDS YP_106694.1 53717708 3093714 complement(77520..78278) 1 NC_006350.1 Similar to Pseudomonas fluorescens transmembrane regulator PrtR SWALL:Q9KIN0 (EMBL:AF228766) (242 aa) fasta scores: E(): 2.2e-34, 47.45% id in 236 aa, and to Xanthomonas axonopodis pv. citri str. 306 transmembrane regulator protein PrtR SWALL:AAM38824 (EMBL:AE012047) (250 aa) fasta scores: E(): 2.5e-26, 40.63% id in 251 aa; transmembrane regulator 78278 3093714 BPSL0069 Burkholderia pseudomallei K96243 transmembrane regulator YP_106694.1 77520 R 272560 CDS YP_106695.1 53717709 3092412 complement(78275..78790) 1 NC_006350.1 Similar to Pseudomonas fluorescens RNA polymerase sigma factor PrtI SWALL:Q9KIM9 (EMBL:AF228767) (165 aa) fasta scores: E(): 1.5e-36, 61.67% id in 167 aa, and to Xanthomonas axonopodis pv. citri str. 306 ecf sigma factor PrtI SWALL:AAM38825 (EMBL:AE012047) (171 aa) fasta scores: E(): 3.9e-32, 56.97% id in 172 aa; RNA polymerase sigma factor 78790 3092412 BPSL0070 Burkholderia pseudomallei K96243 RNA polymerase sigma factor YP_106695.1 78275 R 272560 CDS YP_106696.1 53717710 3092413 78951..80036 1 NC_006350.1 Similar to the N-terminal region of Nicotiana tabacum catalase isozyme 1 CAT-1 SWALL:CAT1_TOBAC (SWALL:P49319) (492 aa) fasta scores: E(): 1.1e-06, 26.54% id in 324 aa, and to the full length Xanthomonas campestris pv. campestris str. ATCC 33913 catalase SrpA SWALL:AAM43127 (EMBL:AE012511) (363 aa) fasta scores: E(): 5.7e-59, 49.09% id in 330 aa. Possible alternative translational start site; catalase 80036 3092413 BPSL0071 Burkholderia pseudomallei K96243 catalase YP_106696.1 78951 D 272560 CDS YP_106697.1 53717711 3091482 80033..80560 1 NC_006350.1 Similar to Escherichia coli cytochrome b561 CybB SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 1.5e-07, 31.66% id in 180 aa, and to Xanthomonas axonopodis pv. citri str. 306 cytochrome b561 YodB SWALL:AAM38827 (EMBL:AE012047) (180 aa) fasta scores: E(): 7.9e-37, 60% id in 170 aa; type-b cytochrome 80560 3091482 BPSL0072 Burkholderia pseudomallei K96243 type-b cytochrome YP_106697.1 80033 D 272560 CDS YP_106698.1 53717712 3091483 complement(81428..83896) 1 NC_006350.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 83896 gyrB 3091483 gyrB Burkholderia pseudomallei K96243 DNA gyrase subunit B YP_106698.1 81428 R 272560 CDS YP_106699.1 53717713 3092204 complement(84085..85188) 1 NC_006350.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 85188 dnaN 3092204 dnaN Burkholderia pseudomallei K96243 DNA polymerase III subunit beta YP_106699.1 84085 R 272560 CDS YP_106700.1 53717714 3093573 complement(85351..86952) 1 NC_006350.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 86952 dnaA 3093573 dnaA Burkholderia pseudomallei K96243 chromosomal replication initiation protein YP_106700.1 85351 R 272560 CDS YP_106701.1 53717715 3094113 87398..87532 1 NC_006350.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 87532 rpmH 3094113 rpmH Burkholderia pseudomallei K96243 50S ribosomal protein L34 YP_106701.1 87398 D 272560 CDS YP_106702.1 53717716 3092170 87606..88016 1 NC_006350.1 Similar to Escherichia coli ribonuclease P protein component RnpA SWALL:RNPA_ECOLI (SWALL:P06277) (119 aa) fasta scores: E(): 2.3e-05, 36.63% id in 101 aa, and to Ralstonia solanacearum probable ribonuclease P protein component rsc0002 or rs01824 SWALL:Q8Y3H8 (EMBL:AL646057) (131 aa) fasta scores: E(): 1.3e-17, 52.25% id in 111 aa; ribonuclease P protein component 88016 rnpA 3092170 rnpA Burkholderia pseudomallei K96243 ribonuclease P protein component YP_106702.1 87606 D 272560 CDS YP_106703.1 53717717 3094114 88096..88365 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0003 or rs01825 SWALL:Q8Y3H7 (EMBL:AL646057) (104 aa) fasta scores: E(): 1.4e-17, 62.66% id in 75 aa, and to Pseudomonas aeruginosa hypothetical protein pa2045 SWALL:YK45_PSEAE (SWALL:Q9I270) (86 aa) fasta scores: E(): 6.6e-16, 65.21% id in 69 aa; hypothetical protein 88365 3094114 BPSL0077 Burkholderia pseudomallei K96243 hypothetical protein YP_106703.1 88096 D 272560 CDS YP_106704.1 53717718 3093552 88374..90050 1 NC_006350.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 90050 3093552 BPSL0078 Burkholderia pseudomallei K96243 inner membrane protein translocase component YidC YP_106704.1 88374 D 272560 CDS YP_106705.1 53717719 3093553 complement(90207..90668) 1 NC_006350.1 No significant database matches. Doubtful CDS. Similar to BPSS2172, 81.818% identity (82.500% ungapped) in 121 aa overlap. Possible alternative translational start sites; hypothetical protein 90668 3093553 BPSL0079 Burkholderia pseudomallei K96243 hypothetical protein YP_106705.1 90207 R 272560 CDS YP_106706.1 53717720 3093677 90964..92367 1 NC_006350.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 92367 trmE 3093677 trmE Burkholderia pseudomallei K96243 tRNA modification GTPase TrmE YP_106706.1 90964 D 272560 CDS YP_106707.1 53717721 3093479 92536..93765 1 NC_006350.1 Similar to Escherichia coli prophage cp4-57 integrase IntA or SlpA or IntX SWALL:INTA_ECOLI (SWALL:P32053) (413 aa) fasta scores: E(): 3.9e-38, 33.57% id in 408 aa, and to Ralstonia solanacearum integrase rsc2489 or rs01107 SWALL:Q8XWI5 (EMBL:AL646070) (417 aa) fasta scores: E(): 1.7e-45, 38.15% id in 401 aa; phage integrase 93765 intA 3093479 intA Burkholderia pseudomallei K96243 phage integrase YP_106707.1 92536 D 272560 CDS YP_106708.1 53717722 3092581 complement(94413..97280) 1 NC_006350.1 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Salmonella typhimurium inner membrane protein STM2745 SWALL:Q8ZMQ9 (EMBL:AE008824) (689 aa) fasta scores: E(): 2.4e-63, 35.3% id in 609 aa. Internal region is similar to the internal region of Escherichia coli DNA primase TraC SWALL:TRC4_ECOLI (SWALL:P27189) (1061 aa) fasta scores: E(): 3.1e-22, 39.32% id in 267 aa. Similar to BPSS0382 (956 aa) fasta scores: E(): 0, 91.832% identity in 955 aa overlap; hypothetical protein 97280 3092581 BPSL0082 Burkholderia pseudomallei K96243 hypothetical protein YP_106708.1 94413 R 272560 CDS YP_106709.1 53717723 3092582 complement(97405..97746) 1 NC_006350.1 hypothetical protein 97746 3092582 BPSL0083 Burkholderia pseudomallei K96243 hypothetical protein YP_106709.1 97405 R 272560 CDS YP_106710.1 53717724 3094005 complement(97743..98000) 1 NC_006350.1 hypothetical protein 98000 3094005 BPSL0084 Burkholderia pseudomallei K96243 hypothetical protein YP_106710.1 97743 R 272560 CDS YP_106711.1 53717725 3094006 complement(97993..98169) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0965 or rs04404 SWALL:Q8Y0S8 (EMBL:AL646062) (58 aa) fasta scores: E(): 7.2e-05, 51.11% id in 45 aa, and to N-terminal region of Streptomyces coelicolor acetyltransferase sco0630 or SCF56.14c SWALL:Q9RD52 (EMBL:AL133424) (173 aa) fasta scores: E(): 6.8, 39.58% id in 48 aa; hypothetical protein 98169 3094006 BPSL0085 Burkholderia pseudomallei K96243 hypothetical protein YP_106711.1 97993 R 272560 CDS YP_106712.1 53717726 3091698 complement(98537..99016) 1 NC_006350.1 Poor database matches. Weakly similar to N-terminal regions of Neisseria meningitidis DNA repair protein NMA0992 SWALL:Q9JV51 (EMBL:AL162754) (459 aa) fasta scores: E(): 7.2, 25.67% id in 148 aa, and Ralstonia solanacearum hypothetical protein rsc3362 or rs02637 SWALL:Q8XU32 (EMBL:AL646074) (276 aa) fasta scores: E(): 4, 29.93% id in 147 aa; hypothetical protein 99016 3091698 BPSL0086 Burkholderia pseudomallei K96243 hypothetical protein YP_106712.1 98537 R 272560 CDS YP_106713.1 53717727 3091699 complement(99409..99930) 1 NC_006350.1 DNA-binding protein 99930 3091699 BPSL0087 Burkholderia pseudomallei K96243 DNA-binding protein YP_106713.1 99409 R 272560 CDS YP_106714.1 53717728 3093680 complement(100338..101255) 1 NC_006350.1 Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsp0267 or rs03699 SWALL:Q8XT48 (EMBL:AL646077) (287 aa) fasta scores: E(): 3e-27, 34.94% id in 289 aa, and to Mycobacterium tuberculosis hypothetical protein RV0836c or MT0857 or MTV043.29c SWALL:O53848 (EMBL:AL022004) (248 aa) fasta scores: E(): 3.4e-08, 29.96% id in 247 aa; hypothetical protein 101255 3093680 BPSL0088 Burkholderia pseudomallei K96243 hypothetical protein YP_106714.1 100338 R 272560 CDS YP_106715.1 53717729 3093681 complement(101248..102249) 1 NC_006350.1 No significant database matches to the full length CDS. C-terminus is similar to C-terminal regions of Ralstonia solanacearum hypothetical protein rsp0266 or rs03700 SWALL:Q8XT49 (EMBL:AL646077) (370 aa) fasta scores: E(): 1.3e-24, 35.66% id in 272 aa, and Corynebacterium glutamicum ATCC 13032 hypothetical protein CGl2790 SWALL:BAC00184 (EMBL:AP005282) (375 aa) fasta scores: E(): 3.6e-07, 26.04% id in 311 aa; hypothetical protein 102249 3093681 BPSL0089 Burkholderia pseudomallei K96243 hypothetical protein YP_106715.1 101248 R 272560 CDS YP_106716.1 53717730 3093912 complement(102609..103439) 1 NC_006350.1 Similar to Ralstonia solanacearum ISRso14-transposase OrfB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 7.1e-98, 86.86% id in 274 aa, and to Pseudomonas aeruginosa hypothetical protein pa0987 SWALL:Q9I4Y2 (EMBL:AE004531) (280 aa) fasta scores: E(): 4.2e-77, 70.49% id in 261 aa; transposase 103439 3093912 BPSL0090 Burkholderia pseudomallei K96243 transposase YP_106716.1 102609 R 272560 CDS YP_106717.1 53717731 3093913 complement(103466..103729) 1 NC_006350.1 Identical to Burkholderia cepacia insertion element IS407 hypothetical 10.0 kDa protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 3.7e-32, 100% id in 87 aa. Similar to Ralstonia solanacearum ISRso14-transposase OrfA protein SWALL:Q8XGL4 (EMBL:AL646083) (87 aa) fasta scores: E(): 2.1e-29, 93.1% id in 87 aa; transposase 103729 3093913 BPSL0091 Burkholderia pseudomallei K96243 transposase YP_106717.1 103466 R 272560 CDS YP_106718.1 53717732 3094375 complement(104028..104915) 1 NC_006350.1 Poor database matches. Weakly similar to internal region of Synechocystis sp. lipoprotein NlpD or SLR0993 SWALL:P74517 (EMBL:D90915) (715 aa) fasta scores: E(): 3.7, 22.95% id in 257 aa; lipoprotein 104915 3094375 BPSL0092 Burkholderia pseudomallei K96243 lipoprotein YP_106718.1 104028 R 272560 CDS YP_106719.1 53717733 3094376 105283..106440 1 NC_006350.1 Poor database matches. Similar to Ralstonia solanacearum probable lipoprotein rsc2263 or rs01296 SWALL:Q8XX53 (EMBL:AL646069) (391 aa) fasta scores: E(): 4.8e-89, 67.09% id in 392 aa; lipoprotein 106440 3094376 BPSL0093 Burkholderia pseudomallei K96243 lipoprotein YP_106719.1 105283 D 272560 CDS YP_106720.1 53717734 3093277 106503..106658 1 NC_006350.1 Poor database matches. Similar to Ralstonia solanacearum probable lipoprotein rsc2264 or rs01295 SWALL:Q8XX52 (EMBL:AL646069) (50 aa) fasta scores: E(): 1.6e-12, 74.51% id in 51 aa, and to the N-terminal region of Deinococcus radiodurans hypothetical protein DR1795 SWALL:Q9RTG9 (EMBL:AE002020) (264 aa) fasta scores: E(): 6.5, 40.38% id in 52 aa; lipoprotein 106658 3093277 BPSL0094 Burkholderia pseudomallei K96243 lipoprotein YP_106720.1 106503 D 272560 CDS YP_106721.1 53717735 3093278 107005..107316 1 NC_006350.1 Poor database matches. Similar to Mus musculus cryptdin-related protein 4C-2 precursor DEFCR-RS7 SWALL:DEFW_MOUSE (SWALL:P50715) (91 aa) fasta scores: E(): 0.73, 28.57% id in 84 aa; hypothetical protein 107316 3093278 BPSL0095 Burkholderia pseudomallei K96243 hypothetical protein YP_106721.1 107005 D 272560 CDS YP_106722.1 53717736 3094564 107334..107894 1 NC_006350.1 Similar to Escherichia coli spermidine n(1)-acetyltransferase SpeG SWALL:ATDA_ECOLI (SWALL:P37354) (185 aa) fasta scores: E(): 9e-46, 63.84% id in 177 aa, and to Listeria monocytogenes spermidine acetyltransferase SpeG SWALL:AAM48485 (EMBL:AF084042) (172 aa) fasta scores: E(): 6.2e-46, 68.9% id in 164 aa; spermidine n(1)-acetyltransferase 107894 speG 3094564 speG Burkholderia pseudomallei K96243 spermidine n(1)-acetyltransferase YP_106722.1 107334 D 272560 CDS YP_106723.1 53717737 3093576 108383..108727 1 NC_006350.1 hypothetical protein 108727 3093576 BPSL0097 Burkholderia pseudomallei K96243 hypothetical protein YP_106723.1 108383 D 272560 CDS YP_106724.1 53717738 3093577 108943..109497 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0785 or rs05053 SWALL:Q8Y1A5 (EMBL:AL646061) (182 aa) fasta scores: E(): 4.7e-39, 57.77% id in 180 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc2289 SWALL:AAM41568 (EMBL:AE012336) (182 aa) fasta scores: E(): 2.1e-34, 55.21% id in 163 aa; hypothetical protein 109497 3093577 BPSL0098 Burkholderia pseudomallei K96243 hypothetical protein YP_106724.1 108943 D 272560 CDS YP_106725.1 53717739 3092506 complement(109682..110098) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable ring-cleaving dioxygenase pa2546 SWALL:Q9I0T8 (EMBL:AE004682) (143 aa) fasta scores: E(): 1.8e-22, 53.03% id in 132 aa, and to the N-terminal region of Rhodococcus globerulus biphenyl-2,3-diol 1,2-dioxygenase II BphC2 SWALL:BHC2_RHOGO (SWALL:P47232) (189 aa) fasta scores: E(): 0.011, 29.85% id in 134 aa; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 110098 3092506 BPSL0099 Burkholderia pseudomallei K96243 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_106725.1 109682 R 272560 CDS YP_106726.1 53717740 3092507 110500..111594 1 NC_006350.1 Similar to Escherichia coli ada regulatory protein Ada SWALL:ADA_ECOLI (SWALL:P06134) (354 aa) fasta scores: E(): 3.3e-58, 48.71% id in 351 aa, and to Pseudomonas aeruginosa O6-methylguanine-DNA methyltransferase pa2118 SWALL:Q9I1Z7 (EMBL:AE004639) (358 aa) fasta scores: E(): 3.4e-57, 48.32% id in 358 aa; O6-methylguanine-DNA methyltransferase 111594 3092507 BPSL0100 Burkholderia pseudomallei K96243 O6-methylguanine-DNA methyltransferase YP_106726.1 110500 D 272560 CDS YP_106727.1 53717741 3094154 111591..112532 1 NC_006350.1 Similar to Escherichia coli DNA-3-methyladenine glycosylase II AlkA or AidA SWALL:3MG2_ECOLI (SWALL:P04395) (282 aa) fasta scores: E(): 1.3e-24, 37.24% id in 290 aa, and to Pseudomonas aeruginosa DNA-3-methyladenine glycosidase II pa1686 SWALL:Q9I339 (EMBL:AE004596) (297 aa) fasta scores: E(): 7.8e-43, 48.13% id in 295 aa; DNA-3-methyladenine glycosylase II 112532 3094154 BPSL0101 Burkholderia pseudomallei K96243 DNA-3-methyladenine glycosylase II YP_106727.1 111591 D 272560 CDS YP_106728.1 53717742 3094155 112703..114304 1 NC_006350.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 114304 3094155 BPSL0102 Burkholderia pseudomallei K96243 glutamate--cysteine ligase YP_106728.1 112703 D 272560 CDS YP_106729.1 53717743 3093184 complement(114323..115771) 1 NC_006350.1 Poor database matches. Similar to the C-terminal regions of Pseudomonas aeruginosa RNA polymerase sigma factor RpoD or RpoDA SWALL:RPSD_PSEAE (SWALL:P26480) (617 aa) fasta scores: E(): 4.3e-35, 33.48% id in 445 aa, and to Bordetella pertussis RNA polymerase sigma factor RpoD SWALL:P77833 (EMBL:U73858) (733 aa) fasta scores: E(): 3.7e-39, 39.14% id in 350 aa; RNA polymerase sigma factor 115771 3093184 BPSL0103 Burkholderia pseudomallei K96243 RNA polymerase sigma factor YP_106729.1 114323 R 272560 CDS YP_106730.1 53717744 3093185 complement(116034..116582) 1 NC_006350.1 hypothetical protein 116582 3093185 BPSL0104 Burkholderia pseudomallei K96243 hypothetical protein YP_106730.1 116034 R 272560 CDS YP_106731.1 53717745 3094117 116974..117090 1 NC_006350.1 hypothetical protein 117090 3094117 BPSL0105 Burkholderia pseudomallei K96243 hypothetical protein YP_106731.1 116974 D 272560 CDS YP_106732.1 53717746 3094118 complement(117179..117748) 1 NC_006350.1 hypothetical protein 117748 3094118 BPSL0106 Burkholderia pseudomallei K96243 hypothetical protein YP_106732.1 117179 R 272560 CDS YP_106733.1 53717747 3092142 complement(117851..118819) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2447 SWALL:Q9I135 (EMBL:AE004672) (307 aa) fasta scores: E(): 3.8e-43, 44.14% id in 299 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0910 or rs01682 SWALL:Q8XRE4 (EMBL:AL646081) (309 aa) fasta scores: E(): 8.5e-36, 39.72% id in 287 aa; LysR family transcriptional regulator 118819 3092142 BPSL0107 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_106733.1 117851 R 272560 CDS YP_106734.1 53717748 3092143 118962..120056 1 NC_006350.1 Similar to Escherichia coli putrescine-binding periplasmic protein precursor PotF SWALL:POTF_ECOLI (SWALL:P31133) (370 aa) fasta scores: E(): 3.7e-63, 47.23% id in 362 aa, and to Pseudomonas aeruginosa polyamine transport protein pa0301 SWALL:Q9I6J0 (EMBL:AE004468) (365 aa) fasta scores: E(): 1.4e-67, 50.14% id in 357 aa; extracellular solute-binding lipoprotein 120056 3092143 BPSL0108 Burkholderia pseudomallei K96243 extracellular solute-binding lipoprotein YP_106734.1 118962 D 272560 CDS YP_106735.1 53717749 3092519 120085..121197 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable acetylpolyamine aminohydrolase pa3774 SWALL:Q9HXM1 (EMBL:AE004796) (380 aa) fasta scores: E(): 5.1e-47, 41.71% id in 374 aa, and to an internal region of Homo sapiens histone deacetylase 6 HDAC6 SWALL:HDA6_HUMAN (SWALL:Q9UBN7) (1215 aa) fasta scores: E(): 3.1e-33, 37.6% id in 367 aa; histone deacetylase 121197 3092519 BPSL0109 Burkholderia pseudomallei K96243 histone deacetylase YP_106735.1 120085 D 272560 CDS YP_106736.1 53717750 3092520 121208..122083 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable hydratase pa0293 SWALL:Q9I6J8 (EMBL:AE004467) (292 aa) fasta scores: E(): 2.1e-77, 65.48% id in 281 aa, and to the C-terminal region of Homo sapiens beta-ureidopropionase BUP1 SWALL:BUP1_HUMAN (SWALL:Q9UBR1) (384 aa) fasta scores: E(): 3e-14, 29.61% id in 287 aa; carbon-nitrogen hydrolase 122083 3092520 BPSL0110 Burkholderia pseudomallei K96243 carbon-nitrogen hydrolase YP_106736.1 121208 D 272560 CDS YP_106737.1 53717751 3094170 123313..124425 1 NC_006350.1 Similar to bacteriophage HP1 probable portal protein SWALL:VPQ_BPHP1 (SWALL:P51717) (345 aa) fasta scores: E(): 1.4e-33, 34.16% id in 319 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1941 or rs03510 SWALL:Q8XY22 (EMBL:AL646067) (361 aa) fasta scores: E(): 3.4e-91, 62.42% id in 354 aa. C-terminal region is similar to BPSL0173, 99.390% identity (99.390% ungapped) in 328 aa overlap and to BPSS1062, 99.085% identity (99.085% ungapped) in 328 aa overlap; portal protein 124425 3094170 BPSL0111 Burkholderia pseudomallei K96243 portal protein YP_106737.1 123313 D 272560 CDS YP_106738.1 53717752 3092174 complement(124499..124783) 1 NC_006350.1 hypothetical protein 124783 3092174 BPSL0112 Burkholderia pseudomallei K96243 hypothetical protein YP_106738.1 124499 R 272560 CDS YP_106739.1 53717753 3092175 complement(124780..125262) 1 NC_006350.1 Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc2888 or rs00212 SWALL:Q8XVE3 (EMBL:AL646072) (152 aa) fasta scores: E(): 1.1e-20, 44.58% id in 157 aa. C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc2388 or rs02761 SWALL:Q8XWT2 (EMBL:AL646069) (84 aa) fasta scores: E(): 2.7e-11, 48.14% id in 81 aa. C-terminal region is similar to BPSL1373, 55.224% identity (55.224% ungapped) in 134 aa overlap; hypothetical protein 125262 3092175 BPSL0113 Burkholderia pseudomallei K96243 hypothetical protein YP_106739.1 124780 R 272560 CDS YP_106740.1 53717754 3091908 complement(125800..126804) 1 NC_006350.1 hypothetical protein 126804 3091908 BPSL0113A Burkholderia pseudomallei K96243 hypothetical protein YP_106740.1 125800 R 272560 CDS YP_106741.1 53717755 3091909 127678..128082 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0957 SWALL:Q9I501 (EMBL:AE004529) (135 aa) fasta scores: E(): 1.3e-08, 31.34% id in 134 aa, and to Brucella melitensis hypothetical cytosolic protein bmei0304 SWALL:Q8YIY5 (EMBL:AE009472) (135 aa) fasta scores: E(): 2.1e-08, 33.85% id in 127 aa; hypothetical protein 128082 3091909 BPSL0114 Burkholderia pseudomallei K96243 hypothetical protein YP_106741.1 127678 D 272560 CDS YP_106742.1 53717756 3092422 128120..128989 1 NC_006350.1 Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc0013 or rs01835 SWALL:Q8Y3G7 (EMBL:AL646057) (297 aa) fasta scores: E(): 1.2e-82, 70.77% id in 284 aa, and to the C-terminal region of Caulobacter crescentus hypothetical protein CC3383 SWALL:Q9A323 (EMBL:AE005999) (353 aa) fasta scores: E(): 0.6, 24.21% id in 256 aa; patatin-like phospholipase 128989 3092422 BPSL0115 Burkholderia pseudomallei K96243 patatin-like phospholipase YP_106742.1 128120 D 272560 CDS YP_106743.1 53717757 3092423 complement(129110..130126) 1 NC_006350.1 Similar to Escherichia coli 2-ketogluconate reductase TkrA SWALL:TKRA_ECOLI (SWALL:P37666) (324 aa) fasta scores: E(): 8.3e-17, 28% id in 325 aa, and to Ralstonia solanacearum D-3-phosphoglycerate dehydrogenase oxidoreductase rsc0016 or rs01838 SWALL:Q8Y3G4 (EMBL:AL646057) (353 aa) fasta scores: E(): 8.8e-100, 72.72% id in 341 aa; D-isomer specific 2-hydroxyacid dehydrogenase 130126 3092423 BPSL0116 Burkholderia pseudomallei K96243 D-isomer specific 2-hydroxyacid dehydrogenase YP_106743.1 129110 R 272560 CDS YP_106744.1 53717758 3092350 130565..131620 1 NC_006350.1 No significant database matches to the full length CDS. CDS is extended at the C-terminus in comparison to orthologues. Similar to Xanthomonas campestris pv. campestris str. ATCC 33913 transcriptional regulator xcc3667 SWALL:AAM42937 (EMBL:AE012487) (311 aa) fasta scores: E(): 3.1e-45, 50% id in 292 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0065 or rs02244 SWALL:Q8Y3B5 (EMBL:AL646057) (312 aa) fasta scores: E(): 3e-47, 47.44% id in 293 aa; LysR family transcriptional regulator 131620 3092350 BPSL0117 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_106744.1 130565 D 272560 CDS YP_106745.1 53717759 3092351 complement(131843..134452) 1 NC_006350.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 134452 3092351 BPSL0118 Burkholderia pseudomallei K96243 DNA topoisomerase III YP_106745.1 131843 R 272560 CDS YP_106746.1 53717760 3093728 complement(134663..135034) 1 NC_006350.1 Similar to Emericella nidulans thioredoxin SWALL:THIO_EMENI (SWALL:P29429) (109 aa) fasta scores: E(): 0.0055, 31.25% id in 80 aa, and to Ralstonia solanacearum thioredoxin-like protein rsc0067 or rs02246 SWALL:Q8Y3B3 (EMBL:AL646057) (129 aa) fasta scores: E(): 2.2e-24, 57.72% id in 123 aa; thioredoxin 135034 3093728 BPSL0119 Burkholderia pseudomallei K96243 thioredoxin YP_106746.1 134663 R 272560 CDS YP_106747.1 53717761 3093729 complement(135094..136284) 1 NC_006350.1 C-terminus is similar to the C-terminal region of Haemophilus influenzae DNA processing chain A protein Smf or DprA SWALL:SMF_HAEIN (SWALL:P43862) (373 aa) fasta scores: E(): 2.1e-30, 41.92% id in 322 aa. Full length CDS is similar to the C-terminal region of Ralstonia solanacearum probable Smf protein rsc0068 or rs02247 SWALL:Q8Y3B2 (EMBL:AL646057) (401 aa) fasta scores: E(): 8.4e-58, 53.33% id in 360 aa. Possible alternative translational start site after codon 21; SMF family protein 136284 3093729 BPSL0120 Burkholderia pseudomallei K96243 SMF family protein YP_106747.1 135094 R 272560 CDS YP_106748.1 53717762 3093438 136513..137016 1 NC_006350.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 137016 def 3093438 def Burkholderia pseudomallei K96243 peptide deformylase YP_106748.1 136513 D 272560 CDS YP_106749.1 53717763 3094560 137048..138031 1 NC_006350.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 138031 fmt 3094560 fmt Burkholderia pseudomallei K96243 methionyl-tRNA formyltransferase YP_106749.1 137048 D 272560 CDS YP_106750.1 53717764 3093926 138152..138787 1 NC_006350.1 Similar to Ralstonia solanacearum probable transporter transmembrane protein rsc0073 or rs02251 SWALL:Q8Y3A7 (EMBL:AL646057) (215 aa) fasta scores: E(): 1.1e-55, 68.69% id in 214 aa, and to Ralstonia solanacearum probable transport transmembrane protein rsc0418 or rs03386 SWALL:Q8Y2B8 (EMBL:AL646059) (206 aa) fasta scores: E(): 5.9e-26, 40.29% id in 201 aa; LysE type translocator protein 138787 3093926 BPSL0123 Burkholderia pseudomallei K96243 LysE type translocator protein YP_106750.1 138152 D 272560 CDS YP_106751.1 53717765 3093927 138897..139754 1 NC_006350.1 Similar to Streptococcus gordonii Challis probable protease HtpX homolog SWALL:HTPX_STRGC (SWALL:O30795) (297 aa) fasta scores: E(): 3.2e-25, 39.79% id in 294 aa, and to Ralstonia solanacearum probable metalloprotease zinc transmembrane protein rsc0074 or rs02252 SWALL:Q8Y3A6 (EMBL:AL646057) (286 aa) fasta scores: E(): 4.1e-92, 86.97% id in 284 aa; M48 family peptidase 139754 3093927 BPSL0124 Burkholderia pseudomallei K96243 M48 family peptidase YP_106751.1 138897 D 272560 CDS YP_106752.1 53717766 3092372 140228..141637 1 NC_006350.1 C-terminal region is similar to Escherichia coli sun protein Sun or Fmu or Fmv or RsmB SWALL:SUN_ECOLI (SWALL:P36929) (429 aa) fasta scores: E(): 3.6e-46, 37.86% id in 441 aa, and to Ralstonia solanacearum RNA methyltransferase rsc0075 or rs02273 SWALL:Q8Y3A5 (EMBL:AL646057) (441 aa) fasta scores: E(): 1.4e-89, 59.11% id in 450 aa. CDS appear to be extended at the N-terminus in comparison to orthologues; NOL1/NOP2/Sun family protein 141637 sun 3092372 sun Burkholderia pseudomallei K96243 NOL1/NOP2/Sun family protein YP_106752.1 140228 D 272560 CDS YP_106753.1 53717767 3093321 141634..142224 1 NC_006350.1 Similar to Neisseria meningitidis hypothetical protein nma0161 SWALL:Q9JWZ1 (EMBL:AL162752) (199 aa) fasta scores: E(): 1.2e-17, 36.87% id in 179 aa, and to the N-terminal region of Ralstonia solanacearum probable proline rich signal peptide protein rsc0076 or rs02253 SWALL:Q8Y3A4 (EMBL:AL646057) (256 aa) fasta scores: E(): 3.4e-38, 56.14% id in 171 aa; hypothetical protein 142224 3093321 BPSL0126 Burkholderia pseudomallei K96243 hypothetical protein YP_106753.1 141634 D 272560 CDS YP_106754.1 53717768 3093322 142226..144634 1 NC_006350.1 Two-component regulatory system family, sensor kinase. Similar to Azorhizobium caulinodans nitrogen regulation protein NtrY SWALL:NTRY_AZOCA (SWALL:Q04850) (771 aa) fasta scores: E(): 2.7e-25, 26.65% id in 814 aa, and to Ralstonia solanacearum probable two component sensor histidine kinase transcription regulator protein rsc0077 or rs02275 SWALL:Q8Y3A3 (EMBL:AL646057) (811 aa) fasta scores: E(): 6.7e-118, 58.61% id in 824 aa; sensor kinase 144634 3093322 BPSL0127 Burkholderia pseudomallei K96243 sensor kinase YP_106754.1 142226 D 272560 CDS YP_106755.1 53717769 3093384 144635..145318 1 NC_006350.1 Two-component regulatory system family, response regulator protein. Similar to Bradyrhizobium japonicum transcriptional regulatory protein FixJ SWALL:FIXJ_BRAJA (SWALL:P23221) (205 aa) fasta scores: E(): 1.1e-09, 31.15% id in 199 aa, and to Ralstonia solanacearum probable two component response regulator transcription regulator protein rsc0078 or rs02276 SWALL:Q8Y3A2 (EMBL:AL646057) (239 aa) fasta scores: E(): 5.9e-33, 72.19% id in 241 aa; response regulator protein 145318 3093384 BPSL0128 Burkholderia pseudomallei K96243 response regulator protein YP_106755.1 144635 D 272560 CDS YP_106756.1 53717770 3093478 complement(145390..146520) 1 NC_006350.1 Similar to the N-terminal regions of Escherichia coli prophage dlp12 integrase IntD or Int SWALL:INTD_ECOLI (SWALL:P24218) (387 aa) fasta scores: E(): 5.1e-19, 36.06% id in 366 aa, and Bacteriophage Sfx integrase Int SWALL:Q9ZXG4 (EMBL:U82084) (386 aa) fasta scores: E(): 4.7e-21, 38.21% id in 369 aa. Note - terminates within tRNA gene that is attachment site for phage; prophage integrase 146520 int 3093478 int Burkholderia pseudomallei K96243 prophage integrase YP_106756.1 145390 R 272560 CDS YP_106757.1 53717771 3093385 complement(147388..150180) 1 NC_006350.1 Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc0967 or rs04399 SWALL:Q8Y0S6 (EMBL:AL646062) (933 aa) fasta scores: E(): 6.5e-153, 50.53% id in 930 aa. N-terminus is similar to the N-termial region of Anabaena sp. DNA primase ALL323 SWALL:Q8YX92 (EMBL:AP003585) (640 aa) fasta scores: E(): 0.21, 23.27% id in 391 aa; hypothetical protein 150180 3093385 BPSL0130 Burkholderia pseudomallei K96243 hypothetical protein YP_106757.1 147388 R 272560 CDS YP_106758.1 53717772 3094417 complement(150192..150446) 1 NC_006350.1 hypothetical protein 150446 3094417 BPSL0130a Burkholderia pseudomallei K96243 hypothetical protein YP_106758.1 150192 R 272560 CDS YP_106759.1 53717773 3094418 complement(150443..150811) 1 NC_006350.1 hypothetical protein 150811 3094418 BPSL0131 Burkholderia pseudomallei K96243 hypothetical protein YP_106759.1 150443 R 272560 CDS YP_106760.1 53717774 3093807 complement(150805..151011) 1 NC_006350.1 hypothetical protein 151011 3093807 BPSL0132 Burkholderia pseudomallei K96243 hypothetical protein YP_106760.1 150805 R 272560 CDS YP_106761.1 53717775 3093808 complement(151180..151419) 1 NC_006350.1 hypothetical protein 151419 3093808 BPSL0133 Burkholderia pseudomallei K96243 hypothetical protein YP_106761.1 151180 R 272560 CDS YP_106762.1 53717776 3093600 complement(151423..151632) 1 NC_006350.1 phage-encoded membrane protein 151632 3093600 BPSL0134 Burkholderia pseudomallei K96243 phage-encoded membrane protein YP_106762.1 151423 R 272560 CDS YP_106763.1 53717777 3093601 complement(151661..151858) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1899 or rs03466 SWALL:Q8XY64 (EMBL:AL646067) (68 aa) fasta scores: E(): 2.2, 28.78% id in 66 aa; hypothetical protein 151858 3093601 BPSL0135 Burkholderia pseudomallei K96243 hypothetical protein YP_106763.1 151661 R 272560 CDS YP_106764.1 53717778 3093950 complement(151864..152082) 1 NC_006350.1 hypothetical protein 152082 3093950 BPSL0136 Burkholderia pseudomallei K96243 hypothetical protein YP_106764.1 151864 R 272560 CDS YP_106765.1 53717779 3093951 complement(152098..152643) 1 NC_006350.1 No significant database matches to the full length CDS. N-terminus is similar to the N-terminal regions of bacteriophage APSE-1 hypothetical protein P43 SWALL:Q9T1Q5 (EMBL:AF157835) (256 aa) fasta scores: E(): 3.6e-10, 35.33% id in 133 aa, and to Yersinia pestis phage protein YPO2093 SWALL:Q8ZER2 (EMBL:AJ414151) (187 aa) fasta scores: E(): 1.1e-13, 42.42% id in 132 aa; hypothetical protein 152643 3093951 BPSL0137 Burkholderia pseudomallei K96243 hypothetical protein YP_106765.1 152098 R 272560 CDS YP_106766.1 53717780 3091758 complement(152729..152977) 1 NC_006350.1 Similar to bacteriophage K139 hypothetical proteinOrf13 SWALL:Q8W755 (EMBL:AF125163) (83 aa) fasta scores: E(): 1.9e-07, 35.71% id in 84 aa, and to Ralstonia solanacearum bacteriophage transcriptional activator-related transcription regulator protein rsc0964 or rs04403 SWALL:Q8Y0S9 (EMBL:AL646062) (73 aa) fasta scores: E(): 7.6e-08, 47.36% id in 76 aa; hypothetical protein 152977 3091758 BPSL0138 Burkholderia pseudomallei K96243 hypothetical protein YP_106766.1 152729 R 272560 CDS YP_106767.1 53717781 3091759 complement(152965..153261) 1 NC_006350.1 Poor database matches. Similar to an internal region of Salmonella typhimurium and Salmonella typhi hypothetical protein STM2627 or STM1013 or STY1021 SWALL:O84891 (EMBL:AF001386) (124 aa) fasta scores: E(): 5.3, 31.76% id in 85 aa; phage DNA-binding protein 153261 3091759 BPSL0139 Burkholderia pseudomallei K96243 phage DNA-binding protein YP_106767.1 152965 R 272560 CDS YP_106768.1 53717782 3093701 complement(153265..153459) 1 NC_006350.1 Poor database matches. Similar to Methanobacterium thermoautotrophicum hypothetical protein MTH467 SWALL:O26567 (EMBL:AE000831) (53 aa) fasta scores: E(): 6.3, 41.17% id in 51 aa; hypothetical protein 153459 3093701 BPSL0140 Burkholderia pseudomallei K96243 hypothetical protein YP_106768.1 153265 R 272560 CDS YP_106769.1 53717783 3093702 153540..154043 1 NC_006350.1 Similar to Ralstonia solanacearum DNA-binding repressor transcription regulator protein rsc1907 or rs03481 SWALL:Q8XY56 (EMBL:AL646067) (173 aa) fasta scores: E(): 2.2e-19, 43.45% id in 168 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related protein Z2969 SWALL:AAM42269 (EMBL:AE012413) (142 aa) fasta scores: E(): 3.2e-11, 43.13% id in 153 aa; phage DNA-binding protein 154043 3093702 BPSL0141 Burkholderia pseudomallei K96243 phage DNA-binding protein YP_106769.1 153540 D 272560 CDS YP_106770.1 53717784 3094095 154096..154845 1 NC_006350.1 Poor database matches. C-terminus is similar to the N-terminal region of Neisseria meningitidis phage transposase NMA1284 SWALL:Q9JUJ5 (EMBL:AL162755) (657 aa) fasta scores: E(): 1, 25.98% id in 177 aa; phage-encoded membrane protein 154845 3094095 BPSL0142 Burkholderia pseudomallei K96243 phage-encoded membrane protein YP_106770.1 154096 D 272560 CDS YP_106771.1 53717785 3094096 154888..155388 1 NC_006350.1 hypothetical protein 155388 3094096 BPSL0143 Burkholderia pseudomallei K96243 hypothetical protein YP_106771.1 154888 D 272560 CDS YP_106772.1 53717786 3091931 complement(155396..156493) 1 NC_006350.1 Similar to bacteriophage 186 late control gene D protein SWALL:VPD_BP186 (SWALL:P21679) (389 aa) fasta scores: E(): 4.9e-35, 41.59% id in 363 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein D SWALL:AAM42266 (EMBL:AE012413) (328 aa) fasta scores: E(): 8e-63, 49.69% id in 328 aa. Similar to BPSS1089, 97.253% identity (97.253% ungapped) in 364 aa overlap; hypothetical protein 156493 3091931 BPSL0144 Burkholderia pseudomallei K96243 hypothetical protein YP_106772.1 155396 R 272560 CDS YP_106773.1 53717787 3091932 complement(156493..156918) 1 NC_006350.1 Similar to bacteriophage phi CTX Orf26 protein SWALL:Q9ZXJ9 (EMBL:AB008550) (146 aa) fasta scores: E(): 2.6e-21, 51.2% id in 125 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein U SWALL:AAM42265 (EMBL:AE012413) (133 aa) fasta scores: E(): 3.7e-21, 53.6% id in 125 aa. Similar to BPSS1088, 98.582% identity (98.582% ungapped) in 141 aa overlap; hypothetical protein 156918 3091932 BPSL0145 Burkholderia pseudomallei K96243 hypothetical protein YP_106773.1 156493 R 272560 CDS YP_106774.1 53717788 3093721 complement(156936..159902) 1 NC_006350.1 Similar to bacteriophage phi CTX Orf25 protein SWALL:Q9ZXK0 (EMBL:AB008550) (904 aa) fasta scores: E(): 2.4e-15, 27.65% id in 1045 aa, and to Ralstonia solanacearum probable phage-related tail transmembrane protein rsc1914 or rs03483 SWALL:Q8XY49 (EMBL:AL646067) (887 aa) fasta scores: E(): 1.5e-86, 39.43% id in 989 aa. Similar to BPSS1087, 84.514% identity (84.514% ungapped) in 988 aa overlap; phage-encoded membrane protein 159902 3093721 BPSL0146 Burkholderia pseudomallei K96243 phage-encoded membrane protein YP_106774.1 156936 R 272560 CDS YP_106775.1 53717789 3093722 complement(159899..160012) 1 NC_006350.1 Similar to bacteriophage phi CTX Orf24.5 protein SWALL:Q9ZXK1 (EMBL:AB008550) (39 aa) fasta scores: E(): 1.9e-07, 56.75% id in 37 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related protein orf52 SWALL:AAM42263 (EMBL:AE012413) (37 aa) fasta scores: E(): 4.4e-08, 62.16% id in 37 aa; hypothetical protein 160012 3093722 BPSL0147 Burkholderia pseudomallei K96243 hypothetical protein YP_106775.1 159899 R 272560 CDS YP_106776.1 53717790 3092322 complement(160021..160365) 1 NC_006350.1 Similar to bacteriophage phi CTX Orf24 protein SWALL:Q9ZXK2 (EMBL:AB008550) (108 aa) fasta scores: E(): 6.9e-14, 54.83% id in 93 aa, and to Ralstonia solanacearum probable phage-related protein rsc1916 or rs03484 SWALL:Q8XY47 (EMBL:AL646067) (118 aa) fasta scores: E(): 4.6e-13, 55.31% id in 94 aa. Identical to BPSS1086, 100.000% identity (100.000% ungapped) in 114 aa overlap; hypothetical protein 160365 3092322 BPSL0148 Burkholderia pseudomallei K96243 hypothetical protein YP_106776.1 160021 R 272560 CDS YP_106777.1 53717791 3092323 complement(160423..160932) 1 NC_006350.1 Similar to bacteriophage P2 major tail tube protein FII SWALL:VPF2_BPP2 (SWALL:P22502) (171 aa) fasta scores: E(): 1.8e-26, 44.7% id in 170 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein FII SWALL:AAM42261 (EMBL:AE012413) (169 aa) fasta scores: E(): 8.2e-37, 54.16% id in 168 aa. Similar to BPSS1085, 99.408% identity (99.408% ungapped) in 169 aa overlap; phage major tail tube protein 160932 3092323 BPSL0149 Burkholderia pseudomallei K96243 phage major tail tube protein YP_106777.1 160423 R 272560 CDS YP_106778.1 53717792 3093626 complement(160948..162120) 1 NC_006350.1 Similar to bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 2.1e-90, 61.63% id in 391 aa, and to Ralstonia solanacearum probable phage-related protein rsc1918 or rs03487 SWALL:Q8XY45 (EMBL:AL646067) (391 aa) fasta scores: E(): 3.1e-100, 67.26% id in 388 aa. Identical to BPSS1084, 100.000% identity (100.000% ungapped) in 390 aa overlap; phage major tail sheath protein 162120 3093626 BPSL0150 Burkholderia pseudomallei K96243 phage major tail sheath protein YP_106778.1 160948 R 272560 CDS YP_106779.1 53717793 3093627 complement(162176..162847) 1 NC_006350.1 N-terminus is similar to bacteriophage lambda tail fiber assembly protein Tfa SWALL:TFA_LAMBD (SWALL:P03740) (194 aa) fasta scores: E(): 0.011, 27.89% id in 190 aa, and to the N-terminal region of Ralstonia solanacearum tail fiber assembly-like protein rsc1920 or rs03489 SWALL:Q8XY43 (EMBL:AL646067) (250 aa) fasta scores: E(): 3.5e-09, 41.73% id in 115 aa. Similar to BPSS1083, 97.758% identity (97.758% ungapped) in 223 aa overlap; phage tail fiber assembly protein 162847 3093627 BPSL0151 Burkholderia pseudomallei K96243 phage tail fiber assembly protein YP_106779.1 162176 R 272560 CDS YP_106780.1 53717794 3092297 complement(162864..165236) 1 NC_006350.1 No significant database matches to the full length CDS. N-terminal region is similar to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail fiber protein Orf8 SWALL:AAM42256 (EMBL:AE012412) (401 aa) fasta scores: E(): 9e-20, 31.07% id in 399 aa. C-terminus is similar to the C-terminal region of Escherichia coli side tail fiber protein homolog from lambdoid prophage RAC StfR SWALL:STFR_ECOLI (SWALL:P76072) (1120 aa) fasta scores: E(): 0.02, 25.6% id in 578 aa. Similar to BPSS1082, 98.348% identity (98.348% ungapped) in 787 aa overlap; phage-related tail fiber protein 165236 3092297 BPSL0152 Burkholderia pseudomallei K96243 phage-related tail fiber protein YP_106780.1 162864 R 272560 CDS YP_106781.1 53717795 3092298 complement(165238..165792) 1 NC_006350.1 Similar to bacteriophage phi CTX Orf19 protein SWALL:Q9ZXK7 (EMBL:AB008550) (178 aa) fasta scores: E(): 4.7e-15, 37.83% id in 148 aa, and to Xanthomonas axonopodis pv. citri str. 306 phage-related tail protein I SWALL:AAM37503 (EMBL:AE011905) (180 aa) fasta scores: E(): 3.5e-30, 50.29% id in 171 aa. Similar to BPSS1081, 99.457% identity (99.457% ungapped) in 184 aa overlap; hypothetical protein 165792 3092298 BPSL0153 Burkholderia pseudomallei K96243 hypothetical protein YP_106781.1 165238 R 272560 CDS YP_106782.1 53717796 3093444 complement(165785..166690) 1 NC_006350.1 Similar to bacteriophage P2 baseplate assembly protein J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 2.4e-45, 45.6% id in 296 aa, and to Salmonella typhi phage baseplate assembly protein STY3689 SWALL:Q8Z344 (EMBL:AL627279) (302 aa) fasta scores: E(): 2.3e-48, 49.66% id in 296 aa. Similar to BPSS1080, 95.017% identity (95.017% ungapped) in 301 aa overlap; phage baseplate assembly protein 166690 3093444 BPSL0154 Burkholderia pseudomallei K96243 phage baseplate assembly protein YP_106782.1 165785 R 272560 CDS YP_106783.1 53717797 3093445 complement(166687..167049) 1 NC_006350.1 Similar to bacteriophage P2 baseplate assembly protein W SWALL:VPW_BPP2 (SWALL:P51768) (115 aa) fasta scores: E(): 9.9e-12, 36.28% id in 113 aa, and to bacteriophage phi CTX Orf17 protein SWALL:Q9ZXK9 (EMBL:AB008550) (114 aa) fasta scores: E(): 1.1e-15, 43.59% id in 117 aa. Similar to BPSS1079, 99.167% identity (99.167% ungapped) in 120 aa overlap; phage baseplate assembly protein 167049 3093445 BPSL0155 Burkholderia pseudomallei K96243 phage baseplate assembly protein YP_106783.1 166687 R 272560 CDS YP_106784.1 53717798 3093916 complement(167046..167726) 1 NC_006350.1 Similar to bacteriophage P2 baseplate assembly protein V SWALL:VPV_BPP2 (SWALL:P31340) (211 aa) fasta scores: E(): 4.3e-14, 34.93% id in 229 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related baseplate protein V SWALL:AAM42258 (EMBL:AE012413) (187 aa) fasta scores: E(): 2.8e-16, 36.46% id in 181 aa. Similar to BPSS1078, 96.903% identity (96.903% ungapped) in 226 aa overlap; phage baseplate assembly protein 167726 3093916 BPSL0156 Burkholderia pseudomallei K96243 phage baseplate assembly protein YP_106784.1 167046 R 272560 CDS YP_106785.1 53717799 3093917 167900..168658 1 NC_006350.1 Similar to Brucella abortus modification methylase CcrM SWALL:MTB1_BRUAB (SWALL:O30570) (377 aa) fasta scores: E(): 4.1e-06, 31.66% id in 259 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 site-specific DNA-methyltransferase xcc2967 SWALL:AAM42239 (EMBL:AE012411) (234 aa) fasta scores: E(): 1.3e-37, 47.21% id in 233 aa. Similar to BPSS1077, 95.926% identity (95.926% ungapped) in 270 aa overlap; phage-encoded modification methylase 168658 3093917 BPSL0157 Burkholderia pseudomallei K96243 phage-encoded modification methylase YP_106785.1 167900 D 272560 CDS YP_106786.1 53717800 3092546 complement(168655..168801) 1 NC_006350.1 hypothetical protein 168801 3092546 BPSL0158 Burkholderia pseudomallei K96243 hypothetical protein YP_106786.1 168655 R 272560 CDS YP_106787.1 53717801 3092547 complement(169058..169525) 1 NC_006350.1 Similar to bacteriophage P2 tail completion protein S SWALL:VPS_BPP2 (SWALL:P36934) (150 aa) fasta scores: E(): 9.2e-13, 36.84% id in 152 aa, and to Xanthomonas axonopodis pv. citri str. 306 phage-related tail protein S SWALL:AAM37500 (EMBL:AE011905) (148 aa) fasta scores: E(): 4e-25, 50.99% id in 151 aa. Similar to BPSS1075, 94.194% identity (94.194% ungapped) in 155 aa overlap; phage tail completion protein 169525 3092547 BPSL0159 Burkholderia pseudomallei K96243 phage tail completion protein YP_106787.1 169058 R 272560 CDS YP_106788.1 53717802 3092102 complement(169522..169938) 1 NC_006350.1 Similar to bacteriophage P2 tail completion protein R SWALL:VPR_BPP2 (SWALL:P36933) (155 aa) fasta scores: E(): 9.4e-13, 37.87% id in 132 aa, and to Ralstonia solanacearum probable tail completion-like protein rsc1929 or rs03499 SWALL:Q8XY34 (EMBL:AL646067) (144 aa) fasta scores: E(): 2.2e-19, 44.92% id in 138 aa. Similar to BPSS1074, 97.101% identity (97.101% ungapped) in 138 aa overlap; phage tail completion protein 169938 3092102 BPSL0160 Burkholderia pseudomallei K96243 phage tail completion protein YP_106788.1 169522 R 272560 CDS YP_106789.1 53717803 3092103 complement(169931..170206) 1 NC_006350.1 Similar to bacteriophage phi CTX Orf12.5 protein SWALL:Q9ZXL4 (EMBL:AB008550) (89 aa) fasta scores: E(): 9.3e-09, 41.97% id in 81 aa, and to Salmonella typhimurium Fels-2 prophage: similar to protein from phage CTX STM2713 SWALL:Q8ZMT9 (EMBL:AE008823) (94 aa) fasta scores: E(): 6.2e-09, 43.59% id in 78 aa. Possible alternative translational start site; hypothetical protein 170206 3092103 BPSL0161 Burkholderia pseudomallei K96243 hypothetical protein YP_106789.1 169931 R 272560 CDS YP_106790.1 53717804 3094467 complement(170043..170483) 1 NC_006350.1 Similar to bacteriophage P2 LysB protein SWALL:LYSB_BPP2 (SWALL:P51770) (141 aa) fasta scores: E(): 0.00013, 35.41% id in 144 aa, and to bacteriophage phi CTX Orf12 protein SWALL:Q9ZXL5 (EMBL:AB008550) (153 aa) fasta scores: E(): 0.0051, 31.65% id in 139 aa. Similar to BPSS1073, 98.571% identity (98.571% ungapped) in 140 aa overlap; phage-encoded lipoprotein 170483 3094467 BPSL0162 Burkholderia pseudomallei K96243 phage-encoded lipoprotein YP_106790.1 170043 R 272560 CDS YP_106791.1 53717805 3094468 complement(170480..171292) 1 NC_006350.1 Similar to bacteriophage phi CTX Orf11 protein SWALL:Q9ZXL6 (EMBL:AB008550) (268 aa) fasta scores: E(): 2.2e-45, 51.3% id in 269 aa, and to Ralstonia solanacearum phage-related protein rsc1931 or rs03500 SWALL:Q8XY32 (EMBL:AL646067) (268 aa) fasta scores: E(): 3.3e-50, 56.77% id in 273 aa. Similar to BPSS1072, 98.148% identity (98.148% ungapped) in 270 aa overlap; phage-encoded peptidoglycan binding protein 171292 3094468 BPSL0163 Burkholderia pseudomallei K96243 phage-encoded peptidoglycan binding protein YP_106791.1 170480 R 272560 CDS YP_106792.1 53717806 3093235 complement(171289..171561) 1 NC_006350.1 Similar to bacteriophage phi CTX Orf10 protein SWALL:Q9ZXL7 (EMBL:AB008550) (90 aa) fasta scores: E(): 2.9e-06, 37.5% id in 80 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related protein Orf90 SWALL:AAM42249 (EMBL:AE012412) (91 aa) fasta scores: E(): 4.7e-10, 41.75% id in 91 aa. Identical to BPSS1071, 100.000% identity (100.000% ungapped) in 90 aa overlap; phage-encoded membrane protein 171561 3093235 BPSL0164 Burkholderia pseudomallei K96243 phage-encoded membrane protein YP_106792.1 171289 R 272560 CDS YP_106793.1 53717807 3093236 complement(171563..171907) 1 NC_006350.1 Similar to bacteriophage phi CTX protein SWALL:Q9ZXL8 (EMBL:AB008550) (117 aa) fasta scores: E(): 0.00085, 31.85% id in 113 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related protein Orf89 SWALL:AAM42248 (EMBL:AE012412) (118 aa) fasta scores: E(): 1.6e-15, 51.75% id in 114 aa. Identical to BPSS1070, 100.000% identity (100.000% ungapped) in 114 aa overlap; phage-encoded membrane protein 171907 3093236 BPSL0165 Burkholderia pseudomallei K96243 phage-encoded membrane protein YP_106793.1 171563 R 272560 CDS YP_106794.1 53717808 3092738 complement(171922..172128) 1 NC_006350.1 Similar to bacteriophage P2 tail protein X SWALL:VPX_BPP2 (SWALL:P51772) (67 aa) fasta scores: E(): 2.4e-11, 69.81% id in 53 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein X SWALL:AAM42247 (EMBL:AE012412) (69 aa) fasta scores: E(): 3.6e-13, 59.42% id in 69 aa. Identical to BPSS1069, 100.000% identity (100.000% ungapped) in 68 aa overlap; phage tail protein 172128 3092738 BPSL0166 Burkholderia pseudomallei K96243 phage tail protein YP_106794.1 171922 R 272560 CDS YP_106795.1 53717809 3092739 complement(172125..172376) 1 NC_006350.1 No significant database matches. Similar to BPSS1068, 97.590% identity (97.590% ungapped) in 83 aa overlap; hypothetical protein 172376 3092739 BPSL0167 Burkholderia pseudomallei K96243 hypothetical protein YP_106795.1 172125 R 272560 CDS YP_106796.1 53717810 3093621 complement(172376..172855) 1 NC_006350.1 Similar to bacteriophage P2 head completion/stabilization protein L SWALL:VPL_BPP2 (SWALL:P25475) (169 aa) fasta scores: E(): 2.8e-15, 42.25% id in 142 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1935 or rs03504 SWALL:Q8XY28 (EMBL:AL646067) (159 aa) fasta scores: E(): 2.8e-26, 55.34% id in 159 aa. Similar to BPSS1067, 98.113% identity (98.113% ungapped) in 159 aa overlap; phage head completion/stabilization protein 172855 3093621 BPSL0168 Burkholderia pseudomallei K96243 phage head completion/stabilization protein YP_106796.1 172376 R 272560 CDS YP_106797.1 53717811 3093622 complement(172955..173644) 1 NC_006350.1 Similar to bacteriophage P2 terminase, endonuclease subunit M SWALL:VPM_BPP2 (SWALL:P25476) (247 aa) fasta scores: E(): 2.7e-27, 46.29% id in 216 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1936 or rs03505 SWALL:Q8XY27 (EMBL:AL646067) (240 aa) fasta scores: E(): 8.6e-30, 48.73% id in 238 aa. Similar to BPSS1066, 99.561% identity (99.561% ungapped) in 228 aa overlap; phage terminase, endonuclease subunit 173644 3093622 BPSL0169 Burkholderia pseudomallei K96243 phage terminase, endonuclease subunit YP_106797.1 172955 R 272560 CDS YP_106798.1 53717812 3092723 complement(173641..174651) 1 NC_006350.1 Similar to bacteriophage P2 major capsid protein precursor N SWALL:VPN_BPP2 (SWALL:P25477) (357 aa) fasta scores: E(): 5.7e-70, 55.84% id in 342 aa, and to bacteriophage phi CTX protein SWALL:Q9ZXM3 (EMBL:AB008550) (338 aa) fasta scores: E(): 1.6e-83, 64.39% id in 337 aa. Similar to BPSS1065, 97.626% identity (97.917% ungapped) in 337 aa overlap; phage major capsid protein 174651 3092723 BPSL0170 Burkholderia pseudomallei K96243 phage major capsid protein YP_106798.1 173641 R 272560 CDS YP_106799.1 53717813 3092724 complement(174685..175494) 1 NC_006350.1 Similar to bacteriophage P2 presumed capsid scaffolding protein O SWALL:VPO_BPP2 (SWALL:P25478) (284 aa) fasta scores: E(): 3e-24, 43.44% id in 290 aa, and to bacteriophage phi CTX protein SWALL:Q9ZXM4 (EMBL:AB008550) (273 aa) fasta scores: E(): 9e-31, 44.71% id in 284 aa. Similar to BPSS1064, 98.885% identity (98.885% ungapped) in 269 aa overlap; phage capsid scaffolding protein 175494 3092724 BPSL0171 Burkholderia pseudomallei K96243 phage capsid scaffolding protein YP_106799.1 174685 R 272560 CDS YP_106800.1 53717814 3092332 175638..177407 1 NC_006350.1 Similar to bacteriophage P2 terminase, ATPase subunit P SWALL:VPP_BPP2 (SWALL:P25479) (590 aa) fasta scores: E(): 4.2e-136, 56.15% id in 593 aa, and to bacteriophage phi CTX protein SWALL:Q9ZXM5 (EMBL:AB008550) (594 aa) fasta scores: E(): 5.3e-160, 67.19% id in 564 aa. Simlar to BPSS1063, 98.980% identity (98.980% ungapped) in 588 aa overlap; phage terminase, ATPase subunit 177407 3092332 BPSL0172 Burkholderia pseudomallei K96243 phage terminase, ATPase subunit YP_106800.1 175638 D 272560 CDS YP_106801.1 53717815 3092333 177404..178459 1 NC_006350.1 Similar to bacteriophage P2 presumed portal vertex protein Q SWALL:VPQ_BPP2 (SWALL:P25480) (344 aa) fasta scores: E(): 5.5e-78, 54.65% id in 344 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1941 or rs03510 SWALL:Q8XY22 (EMBL:AL646067) (361 aa) fasta scores: E(): 1.1e-90, 61.69% id in 355 aa. Similar to BPSS1062, 99.430% identity (99.430% ungapped) in 351 aa overlap and to the C-terminal region of BPSL0111, 99.390% identity (99.390% ungapped) in 328 aa overlap; phage portal vertex protein 178459 3092333 BPSL0173 Burkholderia pseudomallei K96243 phage portal vertex protein YP_106801.1 177404 D 272560 CDS YP_106802.1 53717816 3094173 complement(178503..178859) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0076 or rs05545 SWALL:Q8XTN0 (EMBL:AL646076) (99 aa) fasta scores: E(): 5.5e-10, 50% id in 88 aa, and to Xylella fastidiosa hypothetical protein XF2763 SWALL:Q9P9V8 (EMBL:AE004082) (102 aa) fasta scores: E(): 3e-11, 44.68% id in 94 aa. CDS is extended at the C-terminus in comparison to orthologues. Similar to BPSS1061, 99.153% identity (99.153% ungapped) in 118 aa overlap; phage DNA-binding protein 178859 3094173 BPSL0174 Burkholderia pseudomallei K96243 phage DNA-binding protein YP_106802.1 178503 R 272560 CDS YP_106803.1 53717817 3094174 complement(178862..179185) 1 NC_006350.1 Similar to Xylella fastidiosa hypothetical protein XF1703 SWALL:Q9PCS5 (EMBL:AE003994) (102 aa) fasta scores: E(): 2e-15, 45.91% id in 98 aa, and to Haemophilus influenzae hypothetical protein HI1419 SWALL:YE19_HAEIN (SWALL:P44190) (99 aa) fasta scores: E(): 3.7e-14, 48.93% id in 94 aa. Simlar to BPSS1060, 95.690% identity (95.690% ungapped) in 116 aa overlap; hypothetical protein 179185 3094174 BPSL0175 Burkholderia pseudomallei K96243 hypothetical protein YP_106803.1 178862 R 272560 CDS YP_106804.1 53717818 3093809 complement(179988..180728) 1 NC_006350.1 phage-encoded membrane protein 180728 3093809 BPSL0176 Burkholderia pseudomallei K96243 phage-encoded membrane protein YP_106804.1 179988 R 272560 CDS YP_106805.1 53717819 3093810 182072..182806 1 NC_006350.1 Similar to Caulobacter crescentus ExsB protein CC3160 SWALL:Q9A3P2 (EMBL:AE005980) (242 aa) fasta scores: E(): 4.4e-62, 63.39% id in 224 aa, and to Rhizobium loti hypothetical protein MLL5936 SWALL:Q98AM3 (EMBL:AP003007) (245 aa) fasta scores: E(): 4.8e-57, 58.97% id in 234 aa; hypothetical protein 182806 3093810 BPSL0177 Burkholderia pseudomallei K96243 hypothetical protein YP_106805.1 182072 D 272560 CDS YP_106806.1 53717820 3093742 182900..183532 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1449 or rs03858 SWALL:Q8XZF2 (EMBL:AL646064) (212 aa) fasta scores: E(): 1.4e-57, 67.29% id in 211 aa, and to Caulobacter crescentus hypothetical protein CC3159 SWALL:Q9A3P3 (EMBL:AE005980) (210 aa) fasta scores: E(): 1.8e-55, 64.28% id in 210 aa; hypothetical protein 183532 3093742 BPSL0178 Burkholderia pseudomallei K96243 hypothetical protein YP_106806.1 182900 D 272560 CDS YP_106807.1 53717821 3093743 183552..184004 1 NC_006350.1 Similar to Ralstonia solanacearum 6-pyruvoyl tetrahydrobiopterin synthase rsc1450 or rs03857 SWALL:Q8XZF1 (EMBL:AL646064) (158 aa) fasta scores: E(): 1.1e-34, 65.27% id in 144 aa, and to Neisseria meningitidis hypothetical protein NMA0704 SWALL:Q9JVT6 (EMBL:AL162754) (140 aa) fasta scores: E(): 3e-13, 39.18% id in 148 aa; 6-pyruvoyl tetrahydrobiopterin synthase 184004 3093743 BPSL0179 Burkholderia pseudomallei K96243 6-pyruvoyl tetrahydrobiopterin synthase YP_106807.1 183552 D 272560 CDS YP_106808.1 53717822 3094620 184424..185209 1 NC_006350.1 Similar to Escherichia coli 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpcH or HpaI SWALL:HPAI_ECOLI (SWALL:Q47098) (262 aa) fasta scores: E(): 1.6e-31, 44.57% id in 249 aa, and to Escherichia coli 2-dehydro-3-deoxyglucarate aldolase GarL SWALL:GARL_ECOLI (SWALL:P23522) (256 aa) fasta scores: E(): 6e-32, 46.21% id in 238 aa; HpcH/HpaI aldolase 185209 3094620 BPSL0180 Burkholderia pseudomallei K96243 HpcH/HpaI aldolase YP_106808.1 184424 D 272560 CDS YP_106809.1 53717823 3094621 185206..185982 1 NC_006350.1 Similar to Ralstonia solanacearum signal peptide protein rsc0024 or rs01846 SWALL:Q8Y3F6 (EMBL:AL646057) (252 aa) fasta scores: E(): 2e-31, 43.7% id in 254 aa. C-terminus is similar to the C-terminal region of Neisseria meningitidis hypothetical protein NMB0419 SWALL:Q9K0Y5 (EMBL:AE002398) (198 aa) fasta scores: E(): 2.2e-11, 36.18% id in 152 aa; hypothetical protein 185982 3094621 BPSL0181 Burkholderia pseudomallei K96243 hypothetical protein YP_106809.1 185206 D 272560 CDS YP_106810.1 53717824 3092171 complement(186311..187459) 1 NC_006350.1 Similar to Escherichia coli rod shape-determining protein roda MrdB or RodA SWALL:RODA_ECOLI (SWALL:P15035) (370 aa) fasta scores: E(): 1.1e-38, 49.6% id in 379 aa, and to Ralstonia solanacearum probable rod shape-determining rsc0063 or rs05768 SWALL:Q8Y3B7 (EMBL:AL646057) (380 aa) fasta scores: E(): 5.3e-111, 70.18% id in 379 aa; rod shape-determining protein 187459 rodA 3092171 rodA Burkholderia pseudomallei K96243 rod shape-determining protein YP_106810.1 186311 R 272560 CDS YP_106811.1 53717825 3091495 complement(187471..189927) 1 NC_006350.1 Similar to Escherichia coli penicillin-binding protein 2 MrdA or PbpA SWALL:PBP2_ECOLI (SWALL:P08150) (633 aa) fasta scores: E(): 2.2e-44, 40% id in 645 aa, and to Ralstonia solanacearum probable substrate-binding transmembrane protein rsc0062 or rs05767 SWALL:Q8Y3B8 (EMBL:AL646057) (801 aa) fasta scores: E(): 7.3e-132, 61.75% id in 808 aa. CDS is extended at the C-terminus in comparison to all orthologues except the Ralstonia solanacearum protein; penicillin-binding protein 189927 mrdA 3091495 mrdA Burkholderia pseudomallei K96243 penicillin-binding protein YP_106811.1 187471 R 272560 CDS YP_106812.1 53717826 3094616 complement(190111..190623) 1 NC_006350.1 Similar to Escherichia coli rod shape-determining protein MreD SWALL:MRED_ECOLI (SWALL:P16927) (162 aa) fasta scores: E(): 1.4e-06, 29.41% id in 153 aa, and to Ralstonia solanacearum probable rod shape-determining mred transmembrane protein rsc0061 or rs01884 SWALL:Q8Y3B9 (EMBL:AL646057) (170 aa) fasta scores: E(): 2.7e-43, 65.29% id in 170 aa; rod shape-determining protein 190623 3094616 BPSL0184 Burkholderia pseudomallei K96243 rod shape-determining protein YP_106812.1 190111 R 272560 CDS YP_106813.1 53717827 3094617 complement(190620..191693) 1 NC_006350.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 191693 3094617 BPSL0185 Burkholderia pseudomallei K96243 rod shape-determining protein MreC YP_106813.1 190620 R 272560 CDS YP_106814.1 53717828 3091496 complement(191813..192856) 1 NC_006350.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 192856 mreB 3091496 mreB Burkholderia pseudomallei K96243 rod shape-determining protein MreB YP_106814.1 191813 R 272560 CDS YP_106815.1 53717829 3092492 193227..193520 1 NC_006350.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 193520 gatC 3092492 gatC Burkholderia pseudomallei K96243 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_106815.1 193227 D 272560 CDS YP_106816.1 53717830 3094691 193633..195123 1 NC_006350.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 195123 gatA 3094691 gatA Burkholderia pseudomallei K96243 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_106816.1 193633 D 272560 CDS YP_106817.1 53717831 3092491 195126..196598 1 NC_006350.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 196598 gatB 3092491 gatB Burkholderia pseudomallei K96243 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_106817.1 195126 D 272560 CDS YP_106818.1 53717832 3092222 196725..197564 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0138 or rs01008 SWALL:Q8Y343 (EMBL:AL646057) (275 aa) fasta scores: E(): 1.4e-64, 58.84% id in 277 aa, and to Deinococcus radiodurans hypothetical protein DR0132 SWALL:Q9RY20 (EMBL:AE001875) (266 aa) fasta scores: E(): 1.1e-41, 45.21% id in 261 aa; hypothetical protein 197564 3092222 BPSL0190 Burkholderia pseudomallei K96243 hypothetical protein YP_106818.1 196725 D 272560 CDS YP_106819.1 53717833 3092223 197596..198366 1 NC_006350.1 Similar to the C-terminal region of Homo sapiens DNA repair major apurinic/ apyrimidinic endonuclease APEX or APE or HAP1 or REF1 or APX SWALL:APE1_HUMAN (SWALL:P27695) (317 aa) fasta scores: E(): 1.2e-32, 37.94% id in 253 aa, and to the full length Ralstonia solanacearum exodeoxyribonuclease III protein rsc0140 or rs01010 SWALL:Q8Y341 (EMBL:AL646057) (261 aa) fasta scores: E(): 5.7e-90, 79.45% id in 258 aa; hypothetical protein 198366 3092223 BPSL0191 Burkholderia pseudomallei K96243 hypothetical protein YP_106819.1 197596 D 272560 CDS YP_106820.1 53717834 3094049 complement(198655..199719) 1 NC_006350.1 Similar to Mycobacterium tuberculosis, and Mycobacterium bovis NADP-dependent alcohol dehydrogenase AdhC or Adh SWALL:ADH_MYCTU (SWALL:P31975) (346 aa) fasta scores: E(): 3.3e-68, 56% id in 350 aa, and to Xylella fastidiosa NADP-alcohol dehydrogenase XF1136 SWALL:Q9PE92 (EMBL:AE003949) (352 aa) fasta scores: E(): 3.9e-72, 58.48% id in 342 aa; NADP-dependent alcohol dehydrogenase 199719 adhC 3094049 adhC Burkholderia pseudomallei K96243 NADP-dependent alcohol dehydrogenase YP_106820.1 198655 R 272560 CDS YP_106821.1 53717835 3093871 199931..200875 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1380 SWALL:Q9I3W4 (EMBL:AE004567) (321 aa) fasta scores: E(): 2.2e-59, 56.08% id in 296 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2276 SWALL:Q9I1J8 (EMBL:AE004653) (296 aa) fasta scores: E(): 9.1e-50, 49.11% id in 283 aa; AraC family transcriptional regulator 200875 3093871 BPSL0193 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_106821.1 199931 D 272560 CDS YP_106822.1 53717836 3093872 complement(201249..202193) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc0153 or rs01023 SWALL:Q8Y328 (EMBL:AL646057) (314 aa) fasta scores: E(): 1e-30, 38.64% id in 295 aa. C-terminal region is similar to Pasteurella multocida hypothetical protein PM1190 SWALL:Q9CLN0 (EMBL:AE006159) (257 aa) fasta scores: E(): 4.5e-17, 29.21% id in 243 aa; hypothetical protein 202193 3093872 BPSL0194 Burkholderia pseudomallei K96243 hypothetical protein YP_106822.1 201249 R 272560 CDS YP_106823.1 53717837 3092393 complement(202291..203604) 1 NC_006350.1 Similar to Neisseria meningitidis AmpG-related protein NMB0360 SWALL:Q9K133 (EMBL:AE002392) (427 aa) fasta scores: E(): 4.9e-90, 54.76% id in 420 aa, and to Neisseria gonorrhoeae glutamine synthetase SWALL:P95363 (EMBL:U82701) (427 aa) fasta scores: E(): 4.2e-88, 53.57% id in 420 aa. Possible alternative translational start site; hypothetical protein 203604 3092393 BPSL0195 Burkholderia pseudomallei K96243 hypothetical protein YP_106823.1 202291 R 272560 CDS YP_106824.1 53717838 3092394 complement(203616..204230) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0026 or rs01849 SWALL:Q8Y3F4 (EMBL:AL646057) (215 aa) fasta scores: E(): 1.1e-59, 75.25% id in 194 aa, and to Neisseria meningitidis hypothetical protein NMB0939 SWALL:Q9JZQ6 (EMBL:AE002445) (193 aa) fasta scores: E(): 9.1e-32, 46.87% id in 192 aa; hypothetical protein 204230 3092394 BPSL0196 Burkholderia pseudomallei K96243 hypothetical protein YP_106824.1 203616 R 272560 CDS YP_106825.1 53717839 3094355 complement(204227..205372) 1 NC_006350.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 205372 metX 3094355 metX Burkholderia pseudomallei K96243 homoserine O-acetyltransferase YP_106825.1 204227 R 272560 CDS YP_106826.1 53717840 3094356 complement(205721..206410) 1 NC_006350.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 206410 slmA 3094356 slmA Burkholderia pseudomallei K96243 nucleoid occlusion protein YP_106826.1 205721 R 272560 CDS YP_106827.1 53717841 3092249 complement(206377..207180) 1 NC_006350.1 Poor database matches. C-terminus is similar to the C-terminal region of Ralstonia solanacearum hypothetical protein rsc0032 or rs01855 SWALL:Q8Y3E8 (EMBL:AL646057) (287 aa) fasta scores: E(): 4.3e-40, 55% id in 240 aa. Internal region is similar to the N-terminus of Neisseria meningitidis hydrolase NMB0040 SWALL:Q9K1P1 (EMBL:AE002362) (237 aa) fasta scores: E(): 1.9e-14, 36.5% id in 189 aa; haloacid dehalogenase 207180 3092249 BPSL0199 Burkholderia pseudomallei K96243 haloacid dehalogenase YP_106827.1 206377 R 272560 CDS YP_106828.1 53717842 3092545 complement(207177..208076) 1 NC_006350.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 208076 argB 3092545 argB Burkholderia pseudomallei K96243 acetylglutamate kinase YP_106828.1 207177 R 272560 CDS YP_106829.1 53717843 3092250 208670..209950 1 NC_006350.1 Two-component regulatory system family, sensor kinase. Similar to Rhodobacter sphaeroides sensor histidine kinase RegB or PrrB SWALL:REGB_RHOSH (SWALL:Q53068) (462 aa) fasta scores: E(): 4.6e-22, 30.26% id in 423 aa, and to Ralstonia solanacearum probable transmembrane sensor histidine kinase transcription regulator protein rsc0039 or rs01862 SWALL:Q8Y3E1 (EMBL:AL646057) (448 aa) fasta scores: E(): 2.1e-49, 46.62% id in 429 aa; sensor kinase 209950 3092250 BPSL0201 Burkholderia pseudomallei K96243 sensor kinase YP_106829.1 208670 D 272560 CDS YP_106830.1 53717844 3093396 209961..210512 1 NC_006350.1 Two-component regulatory system family, response regulator protein. Similar to Rhodovulum sulfidophilum photosynthetic apparature regulatory protein RegA SWALL:REGA_RHOSU (SWALL:O82868) (183 aa) fasta scores: E(): 4.4e-24, 46.32% id in 177 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa4493 SWALL:Q9HVS8 (EMBL:AE004863) (186 aa) fasta scores: E(): 7.5e-29, 52.27% id in 176 aa; response regulator protein 210512 3093396 BPSL0202 Burkholderia pseudomallei K96243 response regulator protein YP_106830.1 209961 D 272560 CDS YP_106831.1 53717845 3092996 complement(210930..212273) 1 NC_006350.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 212273 hslU 3092996 hslU Burkholderia pseudomallei K96243 ATP-dependent protease ATP-binding subunit HslU YP_106831.1 210930 R 272560 CDS YP_106832.1 53717846 3091995 complement(212283..212819) 1 NC_006350.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 212819 hslV 3091995 hslV Burkholderia pseudomallei K96243 ATP-dependent protease peptidase subunit YP_106832.1 212283 R 272560 CDS YP_106833.1 53717847 3093397 complement(213074..213490) 1 NC_006350.1 Similar to Ralstonia solanacearum dnaK suppressor protein rsc0046 or rs01869 SWALL:Q8Y3D4 (EMBL:AL646057) (139 aa) fasta scores: E(): 3.6e-41, 86.13% id in 137 aa, and to the C-terminal region of Escherichia coli dnaK suppressor protein DksA SWALL:DKSA_ECOLI (SWALL:P18274) (151 aa) fasta scores: E(): 3.7e-15, 46.21% id in 119 aa; dksA/traR C4-type zinc finger family protein 213490 3093397 BPSL0205 Burkholderia pseudomallei K96243 dksA/traR C4-type zinc finger family protein YP_106833.1 213074 R 272560 CDS YP_106834.1 53717848 3091841 complement(214040..215152) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0047 or rs01870 SWALL:Q8Y3D3 (EMBL:AL646057) (362 aa) fasta scores: E(): 1.2e-96, 72.57% id in 361 aa. Weakly similar to the N-terminal region of Pseudomonas chlororaphis protein required for the expression of the nitrile hydratase genes SWALL:P47K_PSECL (SWALL:P31521) (419 aa) fasta scores: E(): 9.5e-18, 29.94% id in 354 aa; hypothetical protein 215152 3091841 BPSL0206 Burkholderia pseudomallei K96243 hypothetical protein YP_106834.1 214040 R 272560 CDS YP_106835.1 53717849 3091842 complement(215294..216571) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0051 or rs01874 SWALL:Q8Y3C9 (EMBL:AL646057) (397 aa) fasta scores: E(): 2.2e-80, 71.46% id in 424 aa, and to Yersinia pestis hypothetical protein YPO1445 SWALL:Q8ZG67 (EMBL:AJ414148) (396 aa) fasta scores: E(): 3.7e-45, 41.33% id in 421 aa; hypothetical protein 216571 3091842 BPSL0207 Burkholderia pseudomallei K96243 hypothetical protein YP_106835.1 215294 R 272560 CDS YP_106836.1 53717850 3092658 complement(216660..217592) 1 NC_006350.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 217592 xerC 3092658 xerC Burkholderia pseudomallei K96243 site-specific tyrosine recombinase XerC YP_106836.1 216660 R 272560 CDS YP_106837.1 53717851 3092659 complement(217630..218367) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0053 or rs01876 SWALL:Q8Y3C7 (EMBL:AL646057) (237 aa) fasta scores: E(): 1.2e-43, 53.3% id in 242 aa, and to Pseudomonas fluorescens hypothetical protein SWALL:O05323 (EMBL:Y12268) (240 aa) fasta scores: E(): 2.9e-06, 29.15% id in 247 aa; hypothetical protein 218367 3092659 BPSL0209 Burkholderia pseudomallei K96243 hypothetical protein YP_106837.1 217630 R 272560 CDS YP_106838.1 53717852 3094400 complement(218391..219260) 1 NC_006350.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 219260 dapF 3094400 dapF Burkholderia pseudomallei K96243 diaminopimelate epimerase YP_106838.1 218391 R 272560 CDS YP_106839.1 53717853 3093529 complement(219301..220185) 1 NC_006350.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 220185 3093529 BPSL0211 Burkholderia pseudomallei K96243 lipid A biosynthesis lauroyl acyltransferase YP_106839.1 219301 R 272560 CDS YP_106840.1 53717854 3091760 220451..221638 1 NC_006350.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 221638 metK 3091760 metK Burkholderia pseudomallei K96243 S-adenosylmethionine synthetase YP_106840.1 220451 D 272560 CDS YP_106841.1 53717855 3093530 complement(221805..222158) 1 NC_006350.1 No significant database matches. Doubtful CDS; hypothetical protein 222158 3093530 BPSL0212A Burkholderia pseudomallei K96243 hypothetical protein YP_106841.1 221805 R 272560 CDS YP_106842.1 53717856 3094753 222402..223295 1 NC_006350.1 Weakly similar to Homo sapiens phytanoyl-CoA dioxygenase, peroxisomal precursor PHYH or PAHX SWALL:PAHX_HUMAN (SWALL:O14832) (338 aa) fasta scores: E(): 3.7e-09, 26.08% id in 253 aa. C-terminal region is similar to Ralstonia solanacearum probable hydroxylase rsp0209 or rs06150 SWALL:Q8XTA5 (EMBL:AL646077) (263 aa) fasta scores: E(): 3.9e-44, 47.84% id in 255 aa. Possible alternative translational start site; hypothetical protein 223295 3094753 BPSL0213 Burkholderia pseudomallei K96243 hypothetical protein YP_106842.1 222402 D 272560 CDS YP_106843.1 53717857 3094754 223564..223818 1 NC_006350.1 hypothetical protein 223818 3094754 BPSL0214 Burkholderia pseudomallei K96243 hypothetical protein YP_106843.1 223564 D 272560 CDS YP_106844.1 53717858 3093767 223950..224993 1 NC_006350.1 Similar to Xanthomonas axonopodis oxidoreductase XAC3199 SWALL:AAM38043 (EMBL:AE011965) (346 aa) fasta scores: E(): 7.6e-104, 77.03% id in 344 aa, and to Mus musculus voltage-gated potassium channel beta-2 subunit KCNAB2 or KCNB3 or CKbeta2 SWALL:KVB2_MOUSE (SWALL:Q64284) (367 aa) fasta scores: E(): 1.2e-30, 35.93% id in 320 aa; aldo/keto reductase 224993 3093767 BPSL0215 Burkholderia pseudomallei K96243 aldo/keto reductase YP_106844.1 223950 D 272560 CDS YP_106845.1 53717859 3093768 complement(225080..225265) 1 NC_006350.1 Poor database matches. Similar to the N-terminal region of Mus musculus 4833420e20rik protein SWALL:Q9CPT9 (EMBL:AK014734) (261 aa) fasta scores: E(): 5.8, 36.92% id in 65 aa, and to C-terminal region of Chlamydia pneumoniae hypothetical protein CPN0211 or CP0554 SWALL:Q9Z8X3 (EMBL:AE001607) (98 aa) fasta scores: E(): 1.4, 35.18% id in 54 aa; hypothetical protein 225265 3093768 BPSL0216 Burkholderia pseudomallei K96243 hypothetical protein YP_106845.1 225080 R 272560 CDS YP_106846.1 53717860 3092144 complement(225533..226396) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein PA2712 SWALL:Q9I0D0 (EMBL:AE004699) (287 aa) fasta scores: E(): 2.5e-45, 51.94% id in 283 aa, and to Pseudomonas aeruginosa hypothetical protein PA3358 SWALL:Q9HYN8 (EMBL:AE004758) (292 aa) fasta scores: E(): 1.2e-21, 40.2% id in 291 aa; hypothetical protein 226396 3092144 BPSL0217 Burkholderia pseudomallei K96243 hypothetical protein YP_106846.1 225533 R 272560 CDS YP_106847.1 53717861 3092145 complement(226751..228040) 1 NC_006350.1 Similar to Ralstonia solanacearum transporter transmembrane protein rsc3069 or rs00513 SWALL:Q8XUW4 (EMBL:AL646073) (428 aa) fasta scores: E(): 1.5e-80, 57.51% id in 426 aa, and to Pseudomonas aeruginosa probable MFS transporter PA5030 SWALL:Q9HUD9 (EMBL:AE004916) (438 aa) fasta scores: E(): 1.4e-67, 48.79% id in 416 aa; transporter protein 228040 3092145 BPSL0218 Burkholderia pseudomallei K96243 transporter protein YP_106847.1 226751 R 272560 CDS YP_106848.1 53717862 3092801 228394..228606 1 NC_006350.1 hypothetical protein 228606 3092801 BPSL0219 Burkholderia pseudomallei K96243 hypothetical protein YP_106848.1 228394 D 272560 CDS YP_106849.1 53717863 3092802 228647..229678 1 NC_006350.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 229678 3092802 BPSL0220 Burkholderia pseudomallei K96243 serine/threonine protein kinase YP_106849.1 228647 D 272560 CDS YP_106850.1 53717864 3091832 complement(230375..231793) 1 NC_006350.1 Similar to Pseudomonas sp. coniferyl aldehyde dehydrogenase CalB SWALL:CALB_PSESP (SWALL:O86447) (480 aa) fasta scores: E(): 4.8e-77, 47.36% id in 475 aa, and to Pseudomonas aeruginosa probable coniferyl aldehyde dehydrogenase PA0366 SWALL:CALB_PSEAE (SWALL:Q9I6C8) (476 aa) fasta scores: E(): 9.8e-91, 53.03% id in 462 aa; coniferyl aldehyde dehydrogenase 231793 calB 3091832 calB Burkholderia pseudomallei K96243 coniferyl aldehyde dehydrogenase YP_106850.1 230375 R 272560 CDS YP_106851.1 53717865 3092197 complement(231828..233507) 1 NC_006350.1 Similar to Escherichia coli aidB protein SWALL:AIDB_ECOLI (SWALL:P33224) (541 aa) fasta scores: E(): 4.5e-89, 47.49% id in 518 aa. Previously sequenced as Burkholderia pseudomallei acyl-CoA dehydrogenase AidB SWALL:Q9ANZ8 (EMBL:AF317886) (554 aa) fasta scores: E(): 0, 99.81% id in 554 aa. Similar to BPSL3386, 60.759% identity (61.993% ungapped) in 553 aa overlap; acyl-CoA dehydrogenase 233507 aidB 3092197 aidB Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_106851.1 231828 R 272560 CDS YP_106852.1 53717866 3092388 233741..235384 1 NC_006350.1 Similar to Pseudomonas oleovorans alcohol dehydrogenase [acceptor] AlkJ or AlcO SWALL:ALKJ_PSEOL (SWALL:Q00593) (558 aa) fasta scores: E(): 3.4e-98, 48.26% id in 547 aa, and to Rhizobium loti dehydrogenase, polyethylene glycol dehydrogenase, alcohol dehydrogenase, L-sorbose dehydrogenase MLL3225 SWALL:Q98GQ1 (EMBL:AP003001) (535 aa) fasta scores: E(): 3.8e-117, 56.05% id in 537 aa; GMC oxidoreductase 235384 3092388 BPSL0224 Burkholderia pseudomallei K96243 GMC oxidoreductase YP_106852.1 233741 D 272560 CDS YP_106853.1 53717867 3094003 complement(235424..236833) 1 NC_006350.1 C-terminal region is similar to Salmonella typhimurium flagellar hook-length control protein FliK or FlaE or FlaR SWALL:FLIK_SALTY (SWALL:P26416) (405 aa) fasta scores: E(): 2.5e-13, 32.43% id in 410 aa. Full length CDS is similar to Ralstonia solanacearum probable flagellar hook-length control protein rsp0395 or rs00823 SWALL:Q8XSS2 (EMBL:AL646078) (516 aa) fasta scores: E(): 1.6e-14, 32.62% id in 515 aa; flagellar hook-length control protein 236833 3094003 BPSL0225 Burkholderia pseudomallei K96243 flagellar hook-length control protein YP_106853.1 235424 R 272560 CDS YP_106854.1 53717868 3093543 complement(236866..237318) 1 NC_006350.1 Similar to Salmonella typhimurium, and Salmonella typhi flagellar fliJ protein FliJ or FlaO or FlaS SWALL:FLIJ_SALTY (SWALL:P26463) (147 aa) fasta scores: E(): 1.9e-09, 32.85% id in 140 aa, and to Burkholderia cepacia flagellar chaperone FliJ SWALL:Q8VQP3 (EMBL:AF453480) (152 aa) fasta scores: E(): 1.2e-41, 80% id in 150 aa; flagellar fliJ protein 237318 fliJ 3093543 fliJ Burkholderia pseudomallei K96243 flagellar fliJ protein YP_106854.1 236866 R 272560 CDS YP_106855.1 53717869 3094213 complement(237324..238895) 1 NC_006350.1 Similar to Salmonella typhimurium flagellum-specific ATP synthase FliI or FlaC SWALL:FLII_SALTY (SWALL:P26465) (456 aa) fasta scores: E(): 9.9e-107, 69.53% id in 453 aa, and to Burkholderia cepacia flagellar ATPase FliI SWALL:Q8VQP4 (EMBL:AF453480) (501 aa) fasta scores: E(): 2.4e-158, 88.8% id in 509 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translation start site; flagellum-specific ATP synthase 238895 fliI 3094213 fliI Burkholderia pseudomallei K96243 flagellum-specific ATP synthase YP_106855.1 237324 R 272560 CDS YP_106856.1 53717870 3094212 complement(238889..239569) 1 NC_006350.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 239569 fliH 3094212 fliH Burkholderia pseudomallei K96243 flagellar assembly protein H YP_106856.1 238889 R 272560 CDS YP_106857.1 53717871 3094420 complement(239562..240557) 1 NC_006350.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 240557 fliG 3094420 fliG Burkholderia pseudomallei K96243 flagellar motor switch protein G YP_106857.1 239562 R 272560 CDS YP_106858.1 53717872 3094419 complement(240547..242343) 1 NC_006350.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 242343 fliF 3094419 fliF Burkholderia pseudomallei K96243 flagellar MS-ring protein YP_106858.1 240547 R 272560 CDS YP_106859.1 53717873 3092006 242591..242932 1 NC_006350.1 Similar to Salmonella typhimurium flagellar hook-basal body complex protein FliE or FlaN SWALL:FLIE_SALTY (SWALL:P26462) (103 aa) fasta scores: E(): 8.5e-10, 43.24% id in 111 aa, and to Burkholderia cepacia flagellar hook-basal body protein FliE SWALL:Q8VQP8 (EMBL:AF453480) (114 aa) fasta scores: E(): 1.4e-27, 82.45% id in 114 aa; flagellar hook-basal body complex protein 242932 fliE 3092006 fliE Burkholderia pseudomallei K96243 flagellar hook-basal body complex protein YP_106859.1 242591 D 272560 CDS YP_106860.1 53717874 3094559 243065..243499 1 NC_006350.1 Similar to Salmonella typhimurium flagellar protein FliS SWALL:FLIS_SALTY (SWALL:P26609) (135 aa) fasta scores: E(): 2e-19, 50% id in 132 aa, and to Ralstonia solanacearum probable flagellar protein rsp0384 or rs00812 SWALL:Q8XST3 (EMBL:AL646078) (140 aa) fasta scores: E(): 1.3e-17, 50% id in 136 aa; flagellar protein 243499 fliS 3094559 fliS Burkholderia pseudomallei K96243 flagellar protein YP_106860.1 243065 D 272560 CDS YP_106861.1 53717875 3094004 243496..243822 1 NC_006350.1 Similar to Ralstonia solanacearum probable flagellar protein rsp0385 or rs00813 SWALL:Q8XST2 (EMBL:AL646078) (118 aa) fasta scores: E(): 0.0005, 34.44% id in 90 aa, and to Yersinia pestis fliT protein ypo1839 SWALL:Q8ZF79 (EMBL:AJ414150) (120 aa) fasta scores: E(): 5.6, 24.24% id in 99 aa; hypothetical protein 243822 3094004 BPSL0233 Burkholderia pseudomallei K96243 hypothetical protein YP_106861.1 243496 D 272560 CDS YP_106862.1 53717876 3093455 243932..245443 1 NC_006350.1 Poor database matches. Weakly similar to Rhizobium meliloti chemotaxis protein MotD SWALL:MOTD_RHIME (SWALL:Q52964) (475 aa) fasta scores: E(): 0.13, 25.46% id in 483 aa. N-terminal region is weakly similar to Xanthomonas axonopodis hypothetical protein XAC0071 SWALL:AAM34963 (EMBL:AE011630) (346 aa) fasta scores: E(): 0.018, 29.73% id in 333 aa; hypothetical protein 245443 3093455 BPSL0234 Burkholderia pseudomallei K96243 hypothetical protein YP_106862.1 243932 D 272560 CDS YP_106863.1 53717877 3093456 245440..245757 1 NC_006350.1 Similar to Helicobacter pylori member of ABC transporter family AbcB or JHP1483 SWALL:O30551 (EMBL:AF010307) (90 aa) fasta scores: E(): 1.3e-08, 41.46% id in 82 aa, and to the C-terminal region of Escherichia coli flagellar biosynthetic protein FlhB SWALL:FLHB_ECOLI (SWALL:P76299) (382 aa) fasta scores: E(): 9.2e-07, 39.8% id in 103 aa; export system protein 245757 3093456 BPSL0235 Burkholderia pseudomallei K96243 export system protein YP_106863.1 245440 D 272560 CDS YP_106864.1 53717878 3094778 245950..246696 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc3067 or rs00511 SWALL:Q8XUW6 (EMBL:AL646073) (247 aa) fasta scores: E(): 6.5e-14, 45.7% id in 221 aa, and to Vibrio cholerae hypothetical protein VC0283 SWALL:Q9KV73 (EMBL:AE004116) (225 aa) fasta scores: E(): 1.5e-12, 30.69% id in 215 aa. Lack of similarity at the N-terminus in comparison to other proteins; hypothetical protein 246696 3094778 BPSL0236 Burkholderia pseudomallei K96243 hypothetical protein YP_106864.1 245950 D 272560 CDS YP_106865.1 53717879 3094779 complement(246793..247818) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1463 rsc1463 or rs03844 SWALL:Q8XZD8 (EMBL:AL646064) (343 aa) fasta scores: E(): 9.1e-102, 78.59% id in 341 aa, and to Pseudomonas aeruginosa hypothetical protein PA4618 SWALL:Q9HVH3 (EMBL:AE004876) (323 aa) fasta scores: E(): 7.4e-37, 38% id in 321 aa; hypothetical protein 247818 3094779 BPSL0237 Burkholderia pseudomallei K96243 hypothetical protein YP_106865.1 246793 R 272560 CDS YP_106866.1 53717880 3092628 complement(248017..249420) 1 NC_006350.1 Similar to Ralstonia solanacearum probable amino-acid transporter transmembrane protein rsc1588 or rs03950 SWALL:Q8XZ18 (EMBL:AL646065) (476 aa) fasta scores: E(): 1.1e-128, 74.83% id in 461 aa, and to Bacillus subtilis hypothetical protein YhdG SWALL:O07576 (EMBL:Y14082) (465 aa) fasta scores: E(): 3.3e-112, 65.43% id in 460 aa; amino-acid transporter transmembrane protein 249420 3092628 BPSL0238 Burkholderia pseudomallei K96243 amino-acid transporter transmembrane protein YP_106866.1 248017 R 272560 CDS YP_106867.1 53717881 3092629 complement(249662..250318) 1 NC_006350.1 Two-component regulatory system family, response regulator protein. Similar to Pseudomonas aeruginosa response regulator GacA SWALL:GACA_PSEAE (SWALL:Q51373) (214 aa) fasta scores: E(): 1.1e-24, 38.38% id in 211 aa, and to Ralstonia solanacearum response regulator transcription regulator protein rsc0292 or rs03259 SWALL:Q8Y2P3 (EMBL:AL646058) (210 aa) fasta scores: E(): 4.7e-30, 45.23% id in 210 aa; response regulator protein 250318 3092629 BPSL0239 Burkholderia pseudomallei K96243 response regulator protein YP_106867.1 249662 R 272560 CDS YP_106868.1 53717882 3092154 complement(251607..252377) 1 NC_006350.1 Similar to Azotobacter vinelandii ferredoxin--NADP reductase Fpr SWALL:FENR_AZOVI (SWALL:Q44532) (257 aa) fasta scores: E(): 4.6e-66, 63.67% id in 256 aa, and to Neisseria meningitidis ferredoxin--NADP reductase nma1442 or nmb1044 SWALL:Q9JRE3 (EMBL:AL162756) (258 aa) fasta scores: E(): 1.2e-68, 66.92% id in 257 aa. Similar to BPSL2208, 61.328% identity (61.328% ungapped) in 256 aa overlap; ferredoxin-NADP reductase 252377 fpr 3092154 fpr Burkholderia pseudomallei K96243 ferredoxin-NADP reductase YP_106868.1 251607 R 272560 CDS YP_106869.1 53717883 3093993 complement(252590..253243) 1 NC_006350.1 Similar to Escherichia coli threonine efflux protein RhtC SWALL:RHTC_ECOLI (SWALL:P27846) (206 aa) fasta scores: E(): 4.7e-10, 31.5% id in 219 aa, and to Pseudomonas aeruginosa hypothetical protein PA1620 SWALL:Q9I3A2 (EMBL:AE004589) (213 aa) fasta scores: E(): 5.4e-15, 34.41% id in 215 aa; LysE type translocator 253243 3093993 BPSL0242 Burkholderia pseudomallei K96243 LysE type translocator YP_106869.1 252590 R 272560 CDS YP_106870.1 53717884 3093815 complement(253309..254121) 1 NC_006350.1 Similar to Salmonella typhimurium cytoplasmic protein STM0813 SWALL:Q8ZQP3 (EMBL:AE008733) (252 aa) fasta scores: E(): 2e-15, 32.53% id in 249 aa, and to Pseudomonas aeruginosa hypothetical protein PA2156 SWALL:Q9I1V9 (EMBL:AE004642) (245 aa) fasta scores: E(): 2.3e-15, 33.99% id in 253 aa; hypothetical protein 254121 3093815 BPSL0243 Burkholderia pseudomallei K96243 hypothetical protein YP_106870.1 253309 R 272560 CDS YP_106871.1 53717885 3093816 complement(254128..254691) 1 NC_006350.1 No significant database matches. Possible alternative translational start site; hypothetical protein 254691 3093816 BPSL0244 Burkholderia pseudomallei K96243 hypothetical protein YP_106871.1 254128 R 272560 CDS YP_106872.1 53717886 3092515 255025..256032 1 NC_006350.1 ATPase 256032 3092515 BPSL0245 Burkholderia pseudomallei K96243 ATPase YP_106872.1 255025 D 272560 CDS YP_106873.1 53717887 3092516 256104..257225 1 NC_006350.1 Similar to Agrobacterium tumefaciens dehydrogenase atu2734 or AGR_C_4955 SWALL:Q8UBW6 (EMBL:AE009221) (367 aa) fasta scores: E(): 3.7e-76, 58.51% id in 364 aa, and to Rhizobium loti hypothetical protein MLL4765 SWALL:Q98DC4 (EMBL:AP003004) (370 aa) fasta scores: E(): 5.5e-76, 59.29% id in 366 aa; FAD dependent oxidoreductase 257225 3092516 BPSL0246 Burkholderia pseudomallei K96243 FAD dependent oxidoreductase YP_106873.1 256104 D 272560 CDS YP_106874.1 53717888 3093330 257360..257674 1 NC_006350.1 Similar to Ralstonia solanacearum high potential iron-sulfur protein precursor rsc3086 or rs00538 SWALL:HPIS_RALSO (SWALL:Q8XUU7) (103 aa) fasta scores: E(): 1.3e-14, 50.96% id in 104 aa. -terminal region is similar to Rhodocyclus gelatinosus high potential iron-sulfur protein Hip SWALL:HPIS_RHOGE (SWALL:P00265) (74 aa) fasta scores: E(): 1.3e-11, 54.16% id in 72 aa; iron-sulfur protein 257674 3093330 BPSL0247 Burkholderia pseudomallei K96243 iron-sulfur protein YP_106874.1 257360 D 272560 CDS YP_106875.1 53717889 3093331 257907..259199 1 NC_006350.1 Similar to Salmonella typhimurium, and Salmonella typhi citrate-proton symporter CitA SWALL:CIT1_SALTY (SWALL:P24115) (434 aa) fasta scores: E(): 3.4e-53, 38.55% id in 428 aa, and to Pseudomonas aeruginosa probable MFS transporter pa4343 SWALL:Q9HW58 (EMBL:AE004850) (439 aa) fasta scores: E(): 9.4e-83, 53.69% id in 406 aa; transporter protein 259199 3093331 BPSL0248 Burkholderia pseudomallei K96243 transporter protein YP_106875.1 257907 D 272560 CDS YP_106876.1 53717890 3091878 259630..261258 1 NC_006350.1 Similar to Escherichia coli periplasmic dipeptide transport protein precursor DppA SWALL:DPPA_ECOLI (SWALL:P23847) (535 aa) fasta scores: E(): 8.8e-120, 55.29% id in 519 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa4496 SWALL:Q9HVS5 (EMBL:AE004863) (537 aa) fasta scores: E(): 4.6e-148, 66.17% id in 541 aa; periplasmic dipeptide transport protein 261258 dppA 3091878 dppA Burkholderia pseudomallei K96243 periplasmic dipeptide transport protein YP_106876.1 259630 D 272560 CDS YP_106877.1 53717891 3091879 261370..262380 1 NC_006350.1 Similar to Escherichia coli dipeptide transport system permease DppB SWALL:DPPB_ECOLI (SWALL:P37316) (339 aa) fasta scores: E(): 2.7e-85, 65.48% id in 339 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa4503 SWALL:Q9HVR8 (EMBL:AE004864) (336 aa) fasta scores: E(): 5.2e-92, 74.7% id in 336 aa; dipeptide transport system permease 262380 dppB 3091879 dppB Burkholderia pseudomallei K96243 dipeptide transport system permease YP_106877.1 261370 D 272560 CDS YP_106878.1 53717892 3092224 262479..263396 1 NC_006350.1 Similar to Escherichia coli dipeptide transport system permease DppC SWALL:DPPC_ECOLI (SWALL:P37315) (300 aa) fasta scores: E(): 2.3e-63, 56.33% id in 300 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa4504 SWALL:Q9HVR7 (EMBL:AE004864) (303 aa) fasta scores: E(): 1.2e-73, 66.77% id in 304 aa; dipeptide transport system permease 263396 dppC 3092224 dppC Burkholderia pseudomallei K96243 dipeptide transport system permease YP_106878.1 262479 D 272560 CDS YP_106879.1 53717893 3093136 263398..264390 1 NC_006350.1 Similar to Escherichia coli dipeptide transport ATP-binding protein DppD SWALL:DPPD_ECOLI (SWALL:P37314) (327 aa) fasta scores: E(): 1.7e-59, 56.87% id in 320 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa4505 SWALL:Q9HVR6 (EMBL:AE004864) (324 aa) fasta scores: E(): 5e-67, 64.37% id in 320 aa; dipeptide transport system ATP-binding protein 264390 dppD 3093136 dppD Burkholderia pseudomallei K96243 dipeptide transport system ATP-binding protein YP_106879.1 263398 D 272560 CDS YP_106880.1 53717894 3093137 264387..265403 1 NC_006350.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 265403 dppF 3093137 dppF Burkholderia pseudomallei K96243 dipeptide transporter ATP-binding subunit YP_106880.1 264387 D 272560 CDS YP_106881.1 53717895 3094107 265516..266544 1 NC_006350.1 Weakly similar to Xanthomonas campestris hypothetical protein XCC2296 SWALL:AAM41575 (EMBL:AE012337) (321 aa) fasta scores: E(): 4.6e-12, 29.73% id in 296 aa, and to Brucella melitensis hypothetical exported protein BMEI0146 SWALL:Q8YJE0 (EMBL:AE009457) (286 aa) fasta scores: E(): 2.3e-07, 29.63% id in 270 aa; hypothetical protein 266544 3094107 BPSL0254 Burkholderia pseudomallei K96243 hypothetical protein YP_106881.1 265516 D 272560 CDS YP_106882.1 53717896 3094108 complement(267022..267978) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2167 or rs01432 SWALL:Q8XXE7 (EMBL:AL646068) (318 aa) fasta scores: E(): 3e-78, 65.2% id in 319 aa, and to Yersinia pestis membrane protein ypo2702 SWALL:Q8ZD87 (EMBL:AJ414153) (339 aa) fasta scores: E(): 3.5e-52, 54.14% id in 338 aa; hypothetical protein 267978 3094108 BPSL0255 Burkholderia pseudomallei K96243 hypothetical protein YP_106882.1 267022 R 272560 CDS YP_106883.1 53717897 3092328 complement(267975..268727) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2168 or rs01431 SWALL:Q8XXE6 (EMBL:AL646068) (239 aa) fasta scores: E(): 5.1e-62, 69.45% id in 239 aa, and to Yersinia pestis membrane protein ypo2701 SWALL:Q8ZD88 (EMBL:AJ414153) (243 aa) fasta scores: E(): 8.1e-60, 65.41% id in 240 aa; hypothetical protein 268727 3092328 BPSL0256 Burkholderia pseudomallei K96243 hypothetical protein YP_106883.1 267975 R 272560 CDS YP_106884.1 53717898 3092329 complement(269350..270114) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2169 or rs01430 SWALL:Q8XXE5 (EMBL:AL646068) (247 aa) fasta scores: E(): 7.6e-61, 67.34% id in 245 aa, and to Escherichia coli hypothetical protein YbgL SWALL:YBGL_ECOLI (SWALL:P75746) (244 aa) fasta scores: E(): 2.8e-57, 62.29% id in 244 aa; LamB/YcsF family protein 270114 3092329 BPSL0257 Burkholderia pseudomallei K96243 LamB/YcsF family protein YP_106884.1 269350 R 272560 CDS YP_106885.1 53717899 3093400 complement(270173..271252) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2170 or rs01429 SWALL:Q8XXE4 (EMBL:AL646068) (353 aa) fasta scores: E(): 3.2e-32, 54.44% id in 360 aa, and to an internal region of Saccharomyces cerevisiae urea amidolyase [includes: urea carboxylase; allophanate hydrolase] DUR1,2 SWALL:DUR1_YEAST (SWALL:P32528) (1835 aa) fasta scores: E(): 2.4e-15, 32.19% id in 351 aa; hypothetical protein 271252 3093400 BPSL0258 Burkholderia pseudomallei K96243 hypothetical protein YP_106885.1 270173 R 272560 CDS YP_106886.1 53717900 3093401 complement(271249..271905) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2171 or rs01428 SWALL:Q8XXE3 (EMBL:AL646068) (215 aa) fasta scores: E(): 1.5e-50, 63.67% id in 212 aa, and to Salmonella typhimurium carboxylase stm0712 SWALL:Q8ZQV8 (EMBL:AE008729) (218 aa) fasta scores: E(): 6.4e-42, 55.18% id in 212 aa; hypothetical protein 271905 3093401 BPSL0259 Burkholderia pseudomallei K96243 hypothetical protein YP_106886.1 271249 R 272560 CDS YP_106887.1 53717901 3092063 272055..272567 1 NC_006350.1 Similar to the Ralstonia solanacearum hypothetical protein rsc1721 or rs02911 SWALL:Q8XYN7 (EMBL:AL646066) (188 aa) fasta scores: E(): 2.1e-33, 55.21% id in 163 aa, and Brucella melitensis hypothetical protein BMEII0603 SWALL:Q8YCC9 (EMBL:AE009696) (199 aa) fasta scores: E(): 4.6e-27, 46.62% id in 163 aa. CDS is truncated at the N-terminus is comparison to other orthologues; hypothetical protein 272567 3092063 BPSL0260 Burkholderia pseudomallei K96243 hypothetical protein YP_106887.1 272055 D 272560 CDS YP_106888.1 53717902 3092064 complement(272839..273435) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0089 or rs02262 SWALL:Q8Y391 (EMBL:AL646057) (201 aa) fasta scores: E(): 5.6e-24, 45.55% id in 180 aa, and to Rhizobium loti hypothetical protein mll0364 SWALL:Q98N02 (EMBL:AP002994) (197 aa) fasta scores: E(): 2.6e-16, 35.91% id in 181 aa; 5-formyltetrahydrofolate cyclo-ligase 273435 3092064 BPSL0261 Burkholderia pseudomallei K96243 5-formyltetrahydrofolate cyclo-ligase YP_106888.1 272839 R 272560 CDS YP_106889.1 53717903 3093789 273457..275412 1 NC_006350.1 Similar to Escherichia coli soluble lytic murein transglycosylase precursor Slt or SltY SWALL:SLT_ECOLI (SWALL:P03810) (645 aa) fasta scores: E(): 5.8e-31, 27.49% id in 662 aa, and to Ralstonia solanacearum probable soluble lytic murein transglycosylase precursor transmembrane protein rsc0088 or rs02278 SWALL:Q8Y392 (EMBL:AL646057) (650 aa) fasta scores: E(): 9.4e-96, 57.01% id in 656 aa; transglycosylase 275412 3093789 BPSL0262 Burkholderia pseudomallei K96243 transglycosylase YP_106889.1 273457 D 272560 CDS YP_106890.1 53717904 3093790 275534..276493 1 NC_006350.1 Similar to the C-terminal region of Bos taurus NADH-ubiquinone oxidoreductase 39 kDa subunit, mitochondrial precursor NDUFA9 SWALL:NUEM_BOVIN (SWALL:P34943) (380 aa) fasta scores: E(): 7.2e-17, 31.14% id in 305 aa, and to the full length Ralstonia solanacearum NADH-ubiquinone oxidoreductase oxidoreductase rsc0087 or rs02261 SWALL:Q8Y393 (EMBL:AL646057) (334 aa) fasta scores: E(): 3.6e-40, 47.18% id in 337 aa; hypothetical protein 276493 3093790 BPSL0263 Burkholderia pseudomallei K96243 hypothetical protein YP_106890.1 275534 D 272560 CDS YP_106891.1 53717905 3091442 276548..277204 1 NC_006350.1 Similar to Pseudomonas pseudoalcaligenes glutathione S-transferase BphX0 SWALL:Q52037 (EMBL:D85853) (203 aa) fasta scores: E(): 7.5e-05, 30.8% id in 198 aa, and to Ralstonia solanacearum hypothetical protein rsc0086 or rs02260 SWALL:Q8Y394 (EMBL:AL646057) (229 aa) fasta scores: E(): 7.5e-42, 57% id in 207 aa; hypothetical protein 277204 3091442 BPSL0264 Burkholderia pseudomallei K96243 hypothetical protein YP_106891.1 276548 D 272560 CDS YP_106892.1 53717906 3094540 277201..278442 1 NC_006350.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 278442 cca 3094540 cca Burkholderia pseudomallei K96243 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_106892.1 277201 D 272560 CDS YP_106893.1 53717907 3091443 complement(279104..279325) 1 NC_006350.1 Similar to the N-terminal regions of Xanthomonas axonopodis RebB protein rebB SWALL:AAM37859 (EMBL:AE011943) (97 aa) fasta scores: E(): 1.5e-19, 86.95% id in 69 aa, and to Caedibacter taeniospiralis RebB protein SWALL:Q46365 (EMBL:U04524) (105 aa) fasta scores: E(): 3.2e-06, 46.03% id in 63 aa. C-terminal region of the CDS appears to be either truncated, or divergent in comparison to other proteins; hypothetical protein 279325 3091443 BPSL0266 Burkholderia pseudomallei K96243 hypothetical protein YP_106893.1 279104 R 272560 CDS YP_106894.1 53717908 3094413 complement(279820..280260) 1 NC_006350.1 Similar to Proteus mirabilis flagella synthesis protein FlgN SWALL:FLGN_PROMI (SWALL:P96975) (146 aa) fasta scores: E(): 0.078, 24.82% id in 141 aa, and to Yersinia pestis flagella synthesis protein ypo1796 SWALL:Q8ZFC1 (EMBL:AJ414150) (146 aa) fasta scores: E(): 0.00017, 28.67% id in 143 aa; flagella synthesis protein 280260 3094413 BPSL0267 Burkholderia pseudomallei K96243 flagella synthesis protein YP_106894.1 279820 R 272560 CDS YP_106895.1 53717909 3094414 complement(280340..280684) 1 NC_006350.1 Similar to Salmonella typhimurium negative regulator of flagellin synthesis FlgM or FlgR or MviS SWALL:FLGM_SALTY (SWALL:P26477) (97 aa) fasta scores: E(): 0.59, 29.09% id in 110 aa, and to Ralstonia solanacearum probable negative regulator of flagellin synthesis rsp0340 or rs00833 SWALL:Q8XSX7 (EMBL:AL646078) (106 aa) fasta scores: E(): 0.0033, 36.03% id in 111 aa; negative regulator of flagellin synthesis 280684 3094414 BPSL0268 Burkholderia pseudomallei K96243 negative regulator of flagellin synthesis YP_106895.1 280340 R 272560 CDS YP_106896.2 161723214 3094150 complement(280788..281552) 1 NC_006350.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 281552 flgA 3094150 flgA Burkholderia pseudomallei K96243 flagellar basal body P-ring biosynthesis protein FlgA YP_106896.2 280788 R 272560 CDS YP_106897.1 53717911 3094151 282577..283068 1 NC_006350.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal-body rod protein FlgB 283068 flgB 3094151 flgB Burkholderia pseudomallei K96243 flagellar basal-body rod protein FlgB YP_106897.1 282577 D 272560 CDS YP_106898.1 53717912 3094664 283152..283577 1 NC_006350.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 283577 flgC 3094664 flgC Burkholderia pseudomallei K96243 flagellar basal body rod protein FlgC YP_106898.1 283152 D 272560 CDS YP_106899.2 161723213 3093785 283631..284482 1 NC_006350.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 284482 flgD 3093785 flgD Burkholderia pseudomallei K96243 flagellar basal body rod modification protein YP_106899.2 283631 D 272560 CDS YP_106900.1 53717914 3093786 284510..285751 1 NC_006350.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 285751 flgE 3093786 flgE Burkholderia pseudomallei K96243 flagellar hook protein FlgE YP_106900.1 284510 D 272560 CDS YP_106901.1 53717915 3094777 285778..286539 1 NC_006350.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 286539 flgF 3094777 flgF Burkholderia pseudomallei K96243 flagellar basal body rod protein FlgF YP_106901.1 285778 D 272560 CDS YP_106902.1 53717916 3092598 286573..287361 1 NC_006350.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 287361 flgG 3092598 flgG Burkholderia pseudomallei K96243 flagellar basal body rod protein FlgG YP_106902.1 286573 D 272560 CDS YP_106903.1 53717917 3092241 287382..288104 1 NC_006350.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Burkholderia thailandensis has 2 copies of this and other flagella genes; flagellar basal body L-ring protein 288104 flgH 3092241 flgH Burkholderia pseudomallei K96243 flagellar basal body L-ring protein YP_106903.1 287382 D 272560 CDS YP_106904.2 161723212 3092242 288110..289303 1 NC_006350.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 289303 flgI 3092242 flgI Burkholderia pseudomallei K96243 flagellar basal body P-ring protein YP_106904.2 288110 D 272560 CDS YP_106905.1 53717919 3094382 289304..290239 1 NC_006350.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 290239 flgJ 3094382 flgJ Burkholderia pseudomallei K96243 flagellar rod assembly protein/muramidase FlgJ YP_106905.1 289304 D 272560 CDS YP_106906.1 53717920 3094383 290455..291213 1 NC_006350.1 Similar to Escherichia coli hypothetical protein YcgR SWALL:YCGR_ECOLI (SWALL:P76010) (244 aa) fasta scores: E(): 9.3e-24, 33.61% id in 241 aa, and to Yersinia pestis hypothetical protein YPO3220 SWALL:Q8ZC10 (EMBL:AJ414156) (252 aa) fasta scores: E(): 1.8e-23, 32.5% id in 240 aa; hypothetical protein 291213 3094383 BPSL0279 Burkholderia pseudomallei K96243 hypothetical protein YP_106906.1 290455 D 272560 CDS YP_106907.1 53717921 3093210 291419..293422 1 NC_006350.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 293422 flgK 3093210 flgK Burkholderia pseudomallei K96243 flagellar hook-associated protein FlgK YP_106907.1 291419 D 272560 CDS YP_106908.1 53717922 3093211 293438..294670 1 NC_006350.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL 294670 flgL 3093211 flgL Burkholderia pseudomallei K96243 flagellar hook-associated protein FlgL YP_106908.1 293438 D 272560 CDS YP_106909.1 53717923 3093674 295038..296345 1 NC_006350.1 Similar to Bacillus caldolyticus uracil permease PyrP SWALL:PYRP_BACCL (SWALL:P41006) (432 aa) fasta scores: E(): 1.2e-48, 40.99% id in 422 aa, and to Escherichia coli purine permease YcdG SWALL:YCDG_ECOLI (SWALL:P75892) (442 aa) fasta scores: E(): 1.3e-106, 70.25% id in 437 aa; permease 296345 3093674 BPSL0282 Burkholderia pseudomallei K96243 permease YP_106909.1 295038 D 272560 CDS YP_106910.1 53717924 3093675 complement(296548..297429) 1 NC_006350.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 297429 3093675 BPSL0283 Burkholderia pseudomallei K96243 DNA-binding transcriptional activator GcvA YP_106910.1 296548 R 272560 CDS YP_106911.1 53717925 3093131 297527..298126 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0979 or rs04313 SWALL:Q8Y0R4 (EMBL:AL646062) (193 aa) fasta scores: E(): 9.4e-22, 43.25% id in 178 aa, and to the N-terminal region of Pseudomonas aeruginosa chromate transport protein ChrA SWALL:CHRA_PSEAE (SWALL:P14285) (416 aa) fasta scores: E(): 5e-07, 30.86% id in 162 aa; chromate transport protein 298126 3093131 BPSL0284 Burkholderia pseudomallei K96243 chromate transport protein YP_106911.1 297527 D 272560 CDS YP_106912.1 53717926 3093132 298123..298653 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0980 or rs04384 SWALL:Q8Y0R3 (EMBL:AL646062) (181 aa) fasta scores: E(): 8.1e-20, 36.87% id in 179 aa, and to Bacillus subtilis hypothetical protein YwrA SWALL:O05215 (EMBL:Z93767) (178 aa) fasta scores: E(): 1.7e-10, 29.94% id in 167 aa; chromate transporter 298653 3093132 BPSL0285 Burkholderia pseudomallei K96243 chromate transporter YP_106912.1 298123 D 272560 CDS YP_106913.1 53717927 3094537 complement(298984..299322) 1 NC_006350.1 Poor database matches. Weakly similar to Rhizobium meliloti hypothetical protein SWALL:Q91UP1 (EMBL:AJ304453) (111 aa) fasta scores: E(): 0.085, 25% id in 84 aa; hypothetical protein 299322 3094537 BPSL0286 Burkholderia pseudomallei K96243 hypothetical protein YP_106913.1 298984 R 272560 CDS YP_106914.1 53717928 3094538 299436..299780 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0128 SWALL:Q9I704 (EMBL:AE004450) (113 aa) fasta scores: E(): 1.3e-21, 56.52% id in 115 aa, and to Yersinia pestis hypothetical protein ypo2730 SWALL:Q8ZD62 (EMBL:AJ414153) (113 aa) fasta scores: E(): 2.6e-21, 57.89% id in 114 aa; hypothetical protein 299780 3094538 BPSL0287 Burkholderia pseudomallei K96243 hypothetical protein YP_106914.1 299436 D 272560 CDS YP_106915.1 53717929 3094423 299798..300538 1 NC_006350.1 Similar to Listeria monocytogenes hypothetical protein lmo0450 SWALL:Q8Y9S3 (EMBL:AL591975) (221 aa) fasta scores: E(): 5.1e-15, 31.73% id in 208 aa, and to Methanosarcina mazei hypothetical protein MM2287 SWALL:AAM31983 (EMBL:AE013470) (277 aa) fasta scores: E(): 3.5e-20, 37.43% id in 195 aa; hypothetical protein 300538 3094423 BPSL0288 Burkholderia pseudomallei K96243 hypothetical protein YP_106915.1 299798 D 272560 CDS YP_106916.1 53717930 3094401 301079..302212 1 NC_006350.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 8.1e-14, 29% id in 400 aa, and to Ralstonia solanacearum probable outer membrane porin signal peptide protein rsc3091 or rs00544 SWALL:Q8XUU4 (EMBL:AL646073) (376 aa) fasta scores: E(): 2.7e-40, 42.05% id in 390 aa; outer membrane porin 302212 3094401 BPSL0289 Burkholderia pseudomallei K96243 outer membrane porin YP_106916.1 301079 D 272560 CDS YP_106917.1 53717931 3094402 complement(302370..303203) 1 NC_006350.1 hypothetical protein 303203 3094402 BPSL0290 Burkholderia pseudomallei K96243 hypothetical protein YP_106917.1 302370 R 272560 CDS YP_106918.1 53717932 3092426 complement(303251..303814) 1 NC_006350.1 hypothetical protein 303814 3092426 BPSL0291 Burkholderia pseudomallei K96243 hypothetical protein YP_106918.1 303251 R 272560 CDS YP_106919.1 53717933 3092427 complement(304182..305252) 1 NC_006350.1 Weakly similar to Chlorobium tepidum hypothetical protein CT1155 SWALL:AAM72388 (EMBL:AE012876) (354 aa) fasta scores: E(): 0.00043, 23.89% id in 318 aa, and Methanopyrus kandleri predicted integral membrane protein MK1387 SWALL:Q8TVK2 (EMBL:AE010432) (327 aa) fasta scores: E(): 0.0039, 23.88% id in 314 aa. CDS is extended athe N-terminus in comparison to other proteins. Possible alternative translational start site; hypothetical protein 305252 3092427 BPSL0292 Burkholderia pseudomallei K96243 hypothetical protein YP_106919.1 304182 R 272560 CDS YP_106920.1 53717934 3094737 complement(305245..306513) 1 NC_006350.1 No significant database matches to the full length CDS. Internal region is weakly similar to the N-terminal region of Homo sapiens ceramide glucosyltransferase UGCG SWALL:CEGT_HUMAN (SWALL:Q16739) (394 aa) fasta scores: E(): 1.3e-14, 27.58% id in 319 aa. C-terminal region is similar to Synechocystis sp. ceramide glucosyltransferase slr0813 SWALL:P74046 (EMBL:D90911) (389 aa) fasta scores: E(): 3.1e-32, 29.7% id in 377 aa. Possible alternative translational start site; glucosyltransferase 306513 3094737 BPSL0293 Burkholderia pseudomallei K96243 glucosyltransferase YP_106920.1 305245 R 272560 CDS YP_106921.1 53717935 3094738 complement(306895..308424) 1 NC_006350.1 C-terminal region is similar to Pseudomonas aeruginosa porin B precursor OprB SWALL:PORB_PSEAE (SWALL:Q51485) (454 aa) fasta scores: E(): 3.1e-09, 27.09% id in 465 aa, and to Ralstonia solanacearum porin B precursor rsp1632 or rs02190 SWALL:Q8XPK8 (EMBL:AL646086) (456 aa) fasta scores: E(): 4.4e-08, 29.29% id in 471 aa. Possible alternative translational start site; hypothetical protein 308424 3094738 BPSL0294 Burkholderia pseudomallei K96243 hypothetical protein YP_106921.1 306895 R 272560 CDS YP_106922.1 53717936 3093215 310066..311724 1 NC_006350.1 N-terminal region is similar to Pseudomonas aeruginosa manganese transport protein MntH2 SWALL:MNT2_PSEAE (SWALL:Q9RPF2) (438 aa) fasta scores: E(): 7.4e-14, 26.54% id in 437 aa. Similar to Burkholderia cepacia genomovar III natural resistance-associated macrophage protein NRAMP SWALL:Q8VP26 (EMBL:AY028431) (548 aa) fasta scores: E(): 4.1e-176, 82.24% id in 552 aa; natural resistance-associated macrophage protein 311724 3093215 BPSL0295 Burkholderia pseudomallei K96243 natural resistance-associated macrophage protein YP_106922.1 310066 D 272560 CDS YP_106923.1 53717937 3093216 312294..312518 1 NC_006350.1 Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc0126 or rs00996 SWALL:Q8Y355 (EMBL:AL646057) (73 aa) fasta scores: E(): 3.5e-11, 60.81% id in 74 aa; hypothetical protein 312518 3093216 BPSL0296 Burkholderia pseudomallei K96243 hypothetical protein YP_106923.1 312294 D 272560 CDS YP_106924.1 53717938 3092896 312715..314076 1 NC_006350.1 Similar to Pseudomonas aeruginosa glutathione reductase Gor SWALL:GSHR_PSEAE (SWALL:P23189) (451 aa) fasta scores: E(): 3.5e-83, 53.91% id in 447 aa, and to Burkholderia cepacia glutathione reductase Gor SWALL:GSHR_BURCE (SWALL:P48639) (449 aa) fasta scores: E(): 7.2e-91, 56.6% id in 447 aa; glutathione reductase 314076 gor 3092896 gor Burkholderia pseudomallei K96243 glutathione reductase YP_106924.1 312715 D 272560 CDS YP_106925.1 53717939 3091609 314669..316009 1 NC_006350.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 316009 argG 3091609 argG Burkholderia pseudomallei K96243 argininosuccinate synthase YP_106925.1 314669 D 272560 CDS YP_106926.1 53717940 3091772 316171..316806 1 NC_006350.1 hypothetical protein 316806 3091772 BPSL0299 Burkholderia pseudomallei K96243 hypothetical protein YP_106926.1 316171 D 272560 CDS YP_106927.1 53717941 3091773 316896..317621 1 NC_006350.1 Poor database matches. Similar to Xanthomonas axonopodis hypothetical protein xac4135 SWALL:AAM38970 (EMBL:AE012063) (233 aa) fasta scores: E(): 1.3e-20, 37.33% id in 233 aa; hypothetical protein 317621 3091773 BPSL0300 Burkholderia pseudomallei K96243 hypothetical protein YP_106927.1 316896 D 272560 CDS YP_106928.1 53717942 3093380 317943..318191 1 NC_006350.1 Similar to Salmonella typhimurium copper chaperone stm0355 SWALL:Q8ZRG5 (EMBL:AE008711) (64 aa) fasta scores: E(): 5.8e-06, 40.98% id in 61 aa, and to Brucella melitensis heavy metal binding protein bmei1032 SWALL:Q8YGX3 (EMBL:AE009543) (65 aa) fasta scores: E(): 0.00018, 43.07% id in 65 aa; cheavy metal binding protein 318191 3093380 BPSL0301 Burkholderia pseudomallei K96243 cheavy metal binding protein YP_106928.1 317943 D 272560 CDS YP_106929.1 53717943 3094207 complement(318749..321172) 1 NC_006350.1 Similar to Salmonella typhimurium cation transporting P-type ATPase SilP SWALL:SILP_SALTY (SWALL:Q9ZHC7) (824 aa) fasta scores: E(): 4.4e-125, 51.5% id in 833 aa, and to Rhizobium loti cation transporting P-type ATPase mlr5325 SWALL:Q98C24 (EMBL:AP003006) (839 aa) fasta scores: E(): 4.9e-128, 57.19% id in 778 aa; cation transporting P-type ATPase 321172 silP 3094207 silP Burkholderia pseudomallei K96243 cation transporting P-type ATPase YP_106929.1 318749 R 272560 CDS YP_106930.1 53717944 3093381 321837..322511 1 NC_006350.1 Similar to Xanthomonas axonopodis hypothetical protein XAC0838 SWALL:AAM35726 (EMBL:AE011715) (212 aa) fasta scores: E(): 1.8e-45, 67.82% id in 202 aa, and to Rhizobium loti hypothetical protein MLL4130 SWALL:Q98EQ7 (EMBL:AP003003) (212 aa) fasta scores: E(): 4.8e-34, 54.63% id in 205 aa; lipoprotein 322511 3093381 BPSL0303 Burkholderia pseudomallei K96243 lipoprotein YP_106930.1 321837 D 272560 CDS YP_106931.1 53717945 3094247 322508..323356 1 NC_006350.1 Similar to Ralstonia solanacearum glycine rich transmembrane protein rsc0663 or rs01568 SWALL:Q8Y1M7 (EMBL:AL646060) (279 aa) fasta scores: E(): 1.5e-32, 51.31% id in 267 aa, and to Xanthomonas axonopodis glycine rich protein xac0839 SWALL:AAM35727 (EMBL:AE011716) (286 aa) fasta scores: E(): 7.8e-32, 47.4% id in 270 aa; hypothetical protein 323356 3094247 BPSL0304 Burkholderia pseudomallei K96243 hypothetical protein YP_106931.1 322508 D 272560 CDS YP_106932.1 53717946 3094248 323353..323853 1 NC_006350.1 Similar to Xanthomonas campestris hypothetical protein xcc0785 SWALL:AAM40100 (EMBL:AE012178) (164 aa) fasta scores: E(): 1.4e-23, 49.32% id in 148 aa, and to Ralstonia solanacearum hypothetical protein rsc0662 or rs01567 SWALL:Q8Y1M8 (EMBL:AL646060) (173 aa) fasta scores: E(): 2.6e-17, 37.03% id in 162 aa; hypothetical protein 323853 3094248 BPSL0305 Burkholderia pseudomallei K96243 hypothetical protein YP_106932.1 323353 D 272560 CDS YP_106933.1 53717947 3093883 323887..324354 1 NC_006350.1 hypothetical protein 324354 3093883 BPSL0306 Burkholderia pseudomallei K96243 hypothetical protein YP_106933.1 323887 D 272560 CDS YP_106934.1 53717948 3093884 324453..325754 1 NC_006350.1 Similar to Alcaligenes eutrophus nickel and cobalt resistance protein CnrC SWALL:CNRC_ALCEU (SWALL:P37974) (418 aa) fasta scores: E(): 1.2e-10, 27.8% id in 410 aa, and to Ralstonia solanacearum outer membrane cation efflux protein rsp0926 or rs05407 SWALL:Q8XRD2 (EMBL:AL646081) (434 aa) fasta scores: E(): 2.4e-35, 35.96% id in 431 aa; outer membrane efflux protein 325754 3093884 BPSL0307 Burkholderia pseudomallei K96243 outer membrane efflux protein YP_106934.1 324453 D 272560 CDS YP_106935.1 53717949 3092245 325765..327336 1 NC_006350.1 N-terminal region is similar to Salmonella typhimurium membrane fusion protein SilB precursor silB SWALL:SILB_SALTY (SWALL:Q9ZHD0) (430 aa) fasta scores: E(): 1.8e-37, 31.41% id in 417 aa. Full length CDS is similar to Ralstonia solanacearum cation efflux system transmembrane protein rsp0927 or rs05406 SWALL:Q8XRD1 (EMBL:AL646081) (513 aa) fasta scores: E(): 3.2e-51, 38.89% id in 527 aa; hypothetical protein 327336 3092245 BPSL0308 Burkholderia pseudomallei K96243 hypothetical protein YP_106935.1 325765 D 272560 CDS YP_106936.1 53717950 3094206 327333..330545 1 NC_006350.1 Similar to Salmonella typhimurium cation efflux system protein SilA SWALL:SILA_SALTY (SWALL:Q9ZHC9) (1048 aa) fasta scores: E(): 0, 61.03% id in 1047 aa, and to Ralstonia solanacearum probable cation efflux system transmembrane protein rsp0928 or rs05405 SWALL:Q8XRD0 (EMBL:AL646081) (1047 aa) fasta scores: E(): 0, 72.76% id in 1039 aa; cation efflux system protein 330545 silA 3094206 silA Burkholderia pseudomallei K96243 cation efflux system protein YP_106936.1 327333 D 272560 CDS YP_106937.1 53717951 3092246 330542..330883 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsp0929 or rs05404 SWALL:Q8XRC9 (EMBL:AL646081) (114 aa) fasta scores: E(): 1.2e-07, 44.24% id in 113 aa. C-terminus is similar to the C-terminal region of Rhizobium meliloti hypothetical signal peptide protein smc02284 r00588 or smc02284 SWALL:Q92S41 (EMBL:AL591784) (94 aa) fasta scores: E(): 0.006, 36.98% id in 73 aa; hypothetical protein 330883 3092246 BPSL0310 Burkholderia pseudomallei K96243 hypothetical protein YP_106937.1 330542 D 272560 CDS YP_106938.1 53717952 3092301 331093..331539 1 NC_006350.1 Poor database matches. C-terminus is weakly similar to the C-terminal region of Gallus gallus avidin-related protein 4/5 precursor SWALL:AVR4_CHICK (SWALL:P56734) (150 aa) fasta scores: E(): 0.0092, 27.82% id in 115 aa; avidin family protein 331539 3092301 BPSL0311 Burkholderia pseudomallei K96243 avidin family protein YP_106938.1 331093 D 272560 CDS YP_106939.1 53717953 3091987 complement(331614..333446) 1 NC_006350.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 333446 glmS1 3091987 glmS1 Burkholderia pseudomallei K96243 glucosamine--fructose-6-phosphate aminotransferase YP_106939.1 331614 R 272560 CDS YP_106940.1 53717954 3093120 complement(333510..334871) 1 NC_006350.1 [includes: UDP-N-acetylglucosamine pyrophosphorylase; glucosamine-1-phosphate N-acetyltransferase]; Similar to Escherichia coli, and Escherichia coli O157:H7 bifunctional glmU protein [includes: UDP-N-acetylglucosamine pyrophosphorylase; glucosamine-1-phosphate N-acetyltransferase] GlmU SWALL:GLMU_ECO57 (SWALL:P17114) (456 aa) fasta scores: E(): 1.1e-85, 54.42% id in 452 aa, and to Ralstonia solanacearum probable UDP-N-acetylglucosamine pyrophosphorylase rsc0177 or rs01048 SWALL:Q8Y304 (EMBL:AL646057) (455 aa) fasta scores: E(): 1.3e-111, 68.36% id in 452 aa; bifunctional glmU protein 334871 glmU 3093120 glmU Burkholderia pseudomallei K96243 bifunctional glmU protein YP_106940.1 333510 R 272560 CDS YP_106941.1 53717955 3092302 complement(335475..336470) 1 NC_006350.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 336470 3092302 BPSL0314 Burkholderia pseudomallei K96243 C32 tRNA thiolase YP_106941.1 335475 R 272560 CDS YP_106942.1 53717956 3092799 complement(336467..336871) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0157 or rs01027 SWALL:Q8Y324 (EMBL:AL646057) (130 aa) fasta scores: E(): 1.2e-34, 69.04% id in 126 aa, and to Escherichia coli dihydroneopterin aldolase FolB SWALL:FOLB_ECOLI (SWALL:P31055) (122 aa) fasta scores: E(): 1.8, 23.21% id in 112 aa; hypothetical protein 336871 3092799 BPSL0315 Burkholderia pseudomallei K96243 hypothetical protein YP_106942.1 336467 R 272560 CDS YP_106943.1 53717957 3092800 complement(336953..337834) 1 NC_006350.1 Poor database matches. C-terminal region is similar to Ralstonia solanacearum oxidoreductase rsc0156 or rs01026 SWALL:Q8Y325 (EMBL:AL646057) (267 aa) fasta scores: E(): 4.1e-14, 44.96% id in 258 aa. Possible alternative translational start site; hypothetical protein 337834 3092800 BPSL0316 Burkholderia pseudomallei K96243 hypothetical protein YP_106943.1 336953 R 272560 CDS YP_106944.1 53717958 3092448 337902..339092 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0155 or rs01025 SWALL:Q8Y326 (EMBL:AL646057) (397 aa) fasta scores: E(): 1.5e-78, 56.52% id in 391 aa, and to Neisseria meningitidis hypothetical protein nma2076 SWALL:Q9JSY7 (EMBL:AL162758) (405 aa) fasta scores: E(): 4.7e-58, 47.69% id in 390 aa; hypothetical protein 339092 3092448 BPSL0317 Burkholderia pseudomallei K96243 hypothetical protein YP_106944.1 337902 D 272560 CDS YP_106945.1 53717959 3092449 339110..339304 1 NC_006350.1 Similar to Thermoanaerobacter tengcongensis hypothetical protein TTE1181 SWALL:Q8RAN1 (EMBL:AE013080) (70 aa) fasta scores: E(): 0.027, 31.25% id in 64 aa, and to Bacillus halodurans hypothetical protein bh1226 SWALL:Q9KDI7 (EMBL:AP001511) (71 aa) fasta scores: E(): 0.3, 26.31% id in 57 aa; hypothetical protein 339304 3092449 BPSL0318 Burkholderia pseudomallei K96243 hypothetical protein YP_106945.1 339110 D 272560 CDS YP_106946.1 53717960 3092414 complement(339593..340132) 1 NC_006350.1 hypothetical protein 340132 3092414 BPSL0319 Burkholderia pseudomallei K96243 hypothetical protein YP_106946.1 339593 R 272560 CDS YP_106947.1 53717961 3092415 complement(340129..341037) 1 NC_006350.1 Similar to Escherichia coli fructokinase CscK SWALL:SCRK_ECOLI (SWALL:P40713) (307 aa) fasta scores: E(): 9.5e-18, 32.53% id in 292 aa, and to Deinococcus radiodurans fructokinase dr0728 SWALL:Q9RWE1 (EMBL:AE001928) (303 aa) fasta scores: E(): 6.8e-56, 54.05% id in 296 aa; PfkB family carbohydrate kinase 341037 3092415 BPSL0320 Burkholderia pseudomallei K96243 PfkB family carbohydrate kinase YP_106947.1 340129 R 272560 CDS YP_106948.1 53717962 3091776 complement(341034..342491) 1 NC_006350.1 Similar to Xanthomonas campestris hypothetical protein xcc1510 SWALL:Q8PAH3 (EMBL:AE012251) (401 aa) fasta scores: E(): 1.8e-88, 59.11% id in 406 aa, and to Xylella fastidiosa hypothetical protein xf1611 SWALL:Q9PCZ3 (EMBL:AE003988) (401 aa) fasta scores: E(): 4.8e-86, 57.88% id in 406 aa. CDS is extended at the C-terminus in comparison to orthologues; hypothetical protein 342491 3091776 BPSL0321 Burkholderia pseudomallei K96243 hypothetical protein YP_106948.1 341034 R 272560 CDS YP_106949.1 53717963 3091777 complement(342488..343507) 1 NC_006350.1 Similar to Bacillus subtilis degradation activator DegA SWALL:DEGA_BACSU (SWALL:P37947) (337 aa) fasta scores: E(): 5.3e-19, 30.29% id in 340 aa, and to Xanthomonas campestris transcriptional regulator xcc3356 SWALL:Q8P5I5 (EMBL:AE012454) (343 aa) fasta scores: E(): 2.8e-24, 37.72% id in 334 aa; LacI family regulatory protein 343507 3091777 BPSL0322 Burkholderia pseudomallei K96243 LacI family regulatory protein YP_106949.1 342488 R 272560 CDS YP_106950.1 53717964 3093691 complement(343678..345237) 1 NC_006350.1 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 5.7e-40, 34.86% id in 522 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis transmembrane protein rsp0303 or rs05471 SWALL:Q8XT14 (EMBL:AL646077) (515 aa) fasta scores: E(): 6.1e-47, 37.4% id in 516 aa; methyl-accepting chemotaxis protein 345237 3093691 BPSL0323 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_106950.1 343678 R 272560 CDS YP_106951.1 53717965 3093692 complement(345813..346853) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2026 SWALL:YK26_PSEAE (SWALL:P39879) (333 aa) fasta scores: E(): 3.5e-85, 66.66% id in 333 aa, and to Xanthomonas campestris hypothetical protein xcc3822 SWALL:Q8P489 (EMBL:AE012503) (330 aa) fasta scores: E(): 2.8e-72, 60.12% id in 326 aa; sodium bile acid symporter family protein 346853 3093692 BPSL0324 Burkholderia pseudomallei K96243 sodium bile acid symporter family protein YP_106951.1 345813 R 272560 CDS YP_106952.1 53717966 3093037 347284..347712 1 NC_006350.1 hypothetical protein 347712 3093037 BPSL0325 Burkholderia pseudomallei K96243 hypothetical protein YP_106952.1 347284 D 272560 CDS YP_106953.1 53717967 3093038 348120..349196 1 NC_006350.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.1e-10, 31.45% id in 391 aa, and to Ralstonia solanacearum probable porin precursor transmembrane protein rsp0337 or rs00714 SWALL:Q8XSY0 (EMBL:AL646078) (351 aa) fasta scores: E(): 1.6e-71, 55.84% id in 351 aa; outer membrane porin 349196 3093038 BPSL0326 Burkholderia pseudomallei K96243 outer membrane porin YP_106953.1 348120 D 272560 CDS YP_106954.1 53717968 3094187 349356..350318 1 NC_006350.1 Similar to Rhizobium loti transcriptional regulator mll4082 SWALL:Q98EU3 (EMBL:AP003003) (301 aa) fasta scores: E(): 3.6e-32, 39.24% id in 293 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0910 or rs01682 SWALL:Q8XRE4 (EMBL:AL646081) (309 aa) fasta scores: E(): 2.2e-31, 38.53% id in 314 aa; LysR family transcriptional regulator 350318 3094187 BPSL0327 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_106954.1 349356 D 272560 CDS YP_106955.1 53717969 3094188 complement(350794..351753) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0255 or rs00690 SWALL:Q8Y2T0 (EMBL:AL646058) (327 aa) fasta scores: E(): 4.6e-91, 78.23% id in 317 aa, and to Caulobacter crescentus hypothetical protein cc2372 SWALL:Q9A5S5 (EMBL:AE005906) (335 aa) fasta scores: E(): 6.2e-73, 63.77% id in 323 aa; 2-nitropropane dioxygenase 351753 3094188 BPSL0328 Burkholderia pseudomallei K96243 2-nitropropane dioxygenase YP_106955.1 350794 R 272560 CDS YP_106956.1 53717970 3091476 351992..352942 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical haloacetate dehalogenase H-1 protein rsc0256 or rs00691 SWALL:Q8Y2S9 (EMBL:AL646058) (308 aa) fasta scores: E(): 2.3e-80, 64.66% id in 300 aa, and to Anabaena sp. hypothetical protein ALR0039 SWALL:Q8Z0Q1 (EMBL:AP003581) (291 aa) fasta scores: E(): 1.6e-62, 52.94% id in 289 aa. CDS contains extra residues at the N-terminus in comparison to some orthologues. Possible alternative translational start site; hydrolase 352942 3091476 BPSL0329 Burkholderia pseudomallei K96243 hydrolase YP_106956.1 351992 D 272560 CDS YP_106957.1 53717971 3091477 complement(353024..353512) 1 NC_006350.1 Similar to Bacillus subtilis transcriptional regulator LrpC SWALL:LRPC_BACSU (SWALL:P96582) (144 aa) fasta scores: E(): 1.1e-09, 29.32% id in 133 aa, and to Rhizobium loti transcriptional regulator mll3910 SWALL:Q98F66 (EMBL:AP003003) (152 aa) fasta scores: E(): 3.1e-32, 63.63% id in 143 aa. CDS is extended at the N-terminus in comparison to orthologues; transcription regulator AsnC 353512 3091477 BPSL0330 Burkholderia pseudomallei K96243 transcription regulator AsnC YP_106957.1 353024 R 272560 CDS YP_106958.1 53717972 3091849 353624..354538 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein mlr3911 SWALL:Q98F65 (EMBL:AP003003) (301 aa) fasta scores: E(): 8.9e-60, 58.3% id in 295 aa, and to Rhizobium meliloti hypothetical transmembrane protein r00343 or smc00424 SWALL:Q92SM8 (EMBL:AL591783) (304 aa) fasta scores: E(): 1.6e-57, 56.61% id in 295 aa; hypothetical protein 354538 3091849 BPSL0331 Burkholderia pseudomallei K96243 hypothetical protein YP_106958.1 353624 D 272560 CDS YP_106959.1 53717973 3091850 complement(355165..355671) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0260 or rs00695 SWALL:Q8Y2S5 (EMBL:AL646058) (170 aa) fasta scores: E(): 6.2e-42, 70.73% id in 164 aa, and to Aeropyrum pernix hypothetical protein ape2540 SWALL:Q9Y8U3 (EMBL:AP000064) (152 aa) fasta scores: E(): 4.5e-09, 33.33% id in 150 aa; hypothetical protein 355671 3091850 BPSL0332 Burkholderia pseudomallei K96243 hypothetical protein YP_106959.1 355165 R 272560 CDS YP_106960.1 53717974 3091860 complement(355727..356662) 1 NC_006350.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase 356662 3091860 BPSL0333 Burkholderia pseudomallei K96243 hydroxymethylglutaryl-CoA lyase YP_106960.1 355727 R 272560 CDS YP_106961.1 53717975 3091861 complement(356748..357689) 1 NC_006350.1 Similar to Ralstonia solanacearum 2-hydroxyacid dehydrogenase oxidoreductase rsc0262 or rs00697 SWALL:Q8Y2S3 (EMBL:AL646058) (313 aa) fasta scores: E(): 5.5e-65, 57.5% id in 313 aa, and to Salmonella typhi 2-hydroxyacid dehydrogenase in phoH-csgG intergenic region sty1172 SWALL:Q8Z7M6 (EMBL:AL627269) (312 aa) fasta scores: E(): 1.6e-54, 50.16% id in 313 aa; hypothetical protein 357689 3091861 BPSL0334 Burkholderia pseudomallei K96243 hypothetical protein YP_106961.1 356748 R 272560 CDS YP_106962.1 53717976 3094865 complement(357694..358107) 1 NC_006350.1 Similar to Bordetella pertussis hypothetical protein SWALL:O30442 (EMBL:AF006000) (143 aa) fasta scores: E(): 7.7e-40, 71.85% id in 135 aa, and to Pseudomonas aeruginosa probable ring-cleaving dioxygenase pa0817 SWALL:Q9I5C2 (EMBL:AE004517) (141 aa) fasta scores: E(): 2.1e-38, 68.34% id in 139 aa; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 358107 3094865 BPSL0335 Burkholderia pseudomallei K96243 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_106962.1 357694 R 272560 CDS YP_106963.1 53717977 3094866 358260..358910 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1344 or rs02866 SWALL:Q8XZQ1 (EMBL:AL646064) (222 aa) fasta scores: E(): 1.4e-23, 44.04% id in 193 aa, and to Caulobacter crescentus hypothetical protein cc2185 SWALL:Q9A6A9 (EMBL:AE005890) (207 aa) fasta scores: E(): 3.8e-20, 37.56% id in 205 aa; hypothetical protein 358910 3094866 BPSL0336 Burkholderia pseudomallei K96243 hypothetical protein YP_106963.1 358260 D 272560 CDS YP_106964.1 53717978 3092090 complement(358939..359349) 1 NC_006350.1 Similar to Xanthomonas campestris MutT/NUDIX family protein xcc0078 SWALL:Q8PEA3 (EMBL:AE012101) (144 aa) fasta scores: E(): 5.4e-24, 54.88% id in 133 aa, and to the C-terminal region of Methanococcus jannaschii ADP-ribose pyrophosphatase NudF SWALL:ADPP_METJA (SWALL:Q58549) (169 aa) fasta scores: E(): 1.2e-08, 39.47% id in 114 aa; MutT/NUDIX family protein 359349 3092090 BPSL0337 Burkholderia pseudomallei K96243 MutT/NUDIX family protein YP_106964.1 358939 R 272560 CDS YP_106965.1 53717979 3092755 complement(359487..361604) 1 NC_006350.1 Similar to Pseudomonas aeruginosa non-hemolytic phospholipase C precursor PlcN SWALL:PHLN_PSEAE (SWALL:P15713) (692 aa) fasta scores: E(): 2.5e-77, 48.87% id in 708 aa, and to Burkholderia pseudomallei non-hemolytic phospholipase C precursor PlcN SWALL:PHLN_BURPS (SWALL:Q9RGS8) (700 aa) fasta scores: E(): 2.2e-128, 52.84% id in 721 aa. Similar to BPSL2403, 52.705% identity (56.632% ungapped) in 721 aa overlap; non-hemolytic phospholipase C 361604 plcN2 3092755 plcN2 Burkholderia pseudomallei K96243 non-hemolytic phospholipase C YP_106965.1 359487 R 272560 CDS YP_106966.1 53717980 3092091 complement(361650..361946) 1 NC_006350.1 lipoprotein 361946 3092091 BPSL0339 Burkholderia pseudomallei K96243 lipoprotein YP_106966.1 361650 R 272560 CDS YP_106967.1 53717981 3093275 complement(362184..362642) 1 NC_006350.1 Similar to Escherichia coli, and Enterobacter aerogenes leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI SWALL:LRP_ENTAE (SWALL:P19494) (163 aa) fasta scores: E(): 1.5e-21, 44% id in 150 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1377 or rs02081 SWALL:Q8XQA9 (EMBL:AL646084) (152 aa) fasta scores: E(): 2.2e-48, 80.92% id in 152 aa; transcription regulator AsnC 362642 3093275 BPSL0340 Burkholderia pseudomallei K96243 transcription regulator AsnC YP_106967.1 362184 R 272560 CDS YP_106968.1 53717982 3093276 362767..363495 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1376 or rs02082 SWALL:Q8XQB0 (EMBL:AL646084) (250 aa) fasta scores: E(): 4.5e-70, 78.47% id in 223 aa. Weakly similar to Bacillus subtilis branched-chain amino acid transport protein AzlC SWALL:AZLC_BACSU (SWALL:O07942) (254 aa) fasta scores: E(): 8.2e-10, 21.25% id in 240 aa; transport protein 363495 3093276 BPSL0341 Burkholderia pseudomallei K96243 transport protein YP_106968.1 362767 D 272560 CDS YP_106969.1 53717983 3091845 363492..363794 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1375 or rs02083 SWALL:Q8XQB1 (EMBL:AL646084) (100 aa) fasta scores: E(): 1.8e-24, 73.46% id in 98 aa, and to Rhizobium loti hypothetical protein msl2426 SWALL:Q98IF5 (EMBL:AP002999) (99 aa) fasta scores: E(): 7.8e-23, 69.69% id in 99 aa; hypothetical protein 363794 3091845 BPSL0342 Burkholderia pseudomallei K96243 hypothetical protein YP_106969.1 363492 D 272560 CDS YP_106970.1 53717984 3091846 363791..364624 1 NC_006350.1 Similar to Deinococcus radiodurans hydrolase-related protein dr1403 SWALL:Q9RUI3 (EMBL:AE001985) (277 aa) fasta scores: E(): 2.8e-32, 38.62% id in 277 aa. C-terminus is similar to the C-terminal region of Ralstonia solanacearum hydrolase-related protein rsc3406 or rs01715 SWALL:Q8XTY9 (EMBL:AL646075) (266 aa) fasta scores: E(): 1.3e-29, 38.96% id in 231 aa; hydrolase 364624 3091846 BPSL0343 Burkholderia pseudomallei K96243 hydrolase YP_106970.1 363791 D 272560 CDS YP_106971.1 53717985 3092382 complement(364988..365581) 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein rsc0373 or rs03341 SWALL:Q8Y2G3 (EMBL:AL646058) (200 aa) fasta scores: E(): 1.9e-23, 39.17% id in 194 aa, and to Xanthomonas campestris hypothetical protein xcc2038 SWALL:Q8P928 (EMBL:AE012309) (184 aa) fasta scores: E(): 8.4e-18, 36.75% id in 185 aa; hypothetical protein 365581 3092382 BPSL0344 Burkholderia pseudomallei K96243 hypothetical protein YP_106971.1 364988 R 272560 CDS YP_106972.1 53717986 3092383 complement(365609..368338) 1 NC_006350.1 No significant database matches to the full length CDS. Internal region is weakly similar to the C-terminal region of Dactylium dendroides galactose oxidase precursor GaoA SWALL:GAOA_DACDE (SWALL:Q01745) (680 aa) fasta scores: E(): 2.5e-17, 24.01% id in 658 aa; hypothetical protein 368338 3092383 BPSL0345 Burkholderia pseudomallei K96243 hypothetical protein YP_106972.1 365609 R 272560 CDS YP_106973.1 53717987 3091480 complement(369407..370309) 1 NC_006350.1 Similar to Escherichia coli dihydrodipicolinate synthase DapA SWALL:DAPA_ECOLI (SWALL:P05640) (292 aa) fasta scores: E(): 7.7e-22, 33.45% id in 278 aa, and to Ralstonia solanacearum probable dihydrodipicolinate synthase-related transmembrane protein rsc0665 or rs01570 SWALL:Q8Y1M5 (EMBL:AL646060) (304 aa) fasta scores: E(): 2.1e-40, 44.8% id in 279 aa; dihydrodipicolinate synthetase 370309 3091480 BPSL0346 Burkholderia pseudomallei K96243 dihydrodipicolinate synthetase YP_106973.1 369407 R 272560 CDS YP_106974.1 53717988 3091481 complement(370573..371082) 1 NC_006350.1 No significant database matches to the full length CDS. C-terminal region is similar to Burkholderia cepacia insertion element IS402 hypothetical protein SWALL:YI22_BURCE (SWALL:P24537) (147 aa) fasta scores: E(): 2.1e-17, 53.53% id in 99 aa, and Ralstonia solanacearum probable tis1421-transposase orfa protein SWALL:Q8XGS3 (EMBL:AL646082) (134 aa) fasta scores: E(): 1.5e-14, 51.04% id in 96 aa; insertion element protein 371082 3091481 BPSL0347 Burkholderia pseudomallei K96243 insertion element protein YP_106974.1 370573 R 272560 CDS YP_106975.1 53717989 3092575 complement(371477..372250) 1 NC_006350.1 Poor database matches. C-terminal region is weakly similar to Ralstonia solanacearum hypothetical protein rsc0613 or rs01514 SWALL:Q8Y1S6 (EMBL:AL646060) (190 aa) fasta scores: E(): 0.024, 25% id in 188 aa; hypothetical protein 372250 3092575 BPSL0348 Burkholderia pseudomallei K96243 hypothetical protein YP_106975.1 371477 R 272560 CDS YP_106976.1 53717990 3092576 372396..372953 1 NC_006350.1 Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc0613 or rs01514 SWALL:Q8Y1S6 (EMBL:AL646060) (190 aa) fasta scores: E(): 1.3e-15, 34.97% id in 183 aa; hypothetical protein 372953 3092576 BPSL0349 Burkholderia pseudomallei K96243 hypothetical protein YP_106976.1 372396 D 272560 CDS YP_106977.1 53717991 3092731 373423..374079 1 NC_006350.1 Similar to the C-terminal regions of Brucella melitensis nitrogen assimilation regulatory protein bmei0868 SWALL:Q8YHD3 (EMBL:AE009527) (453 aa) fasta scores: E(): 1.6e-11, 33.88% id in 183 aa, and to Salmonella typhimurium transcriptional regulator of two-component regulator protein YfhA SWALL:Q8ZN32 (EMBL:AE008816) (445 aa) fasta scores: E(): 1.3e-10, 34.83% id in 178 aa; Fis family transcriptional regulator 374079 3092731 BPSL0350 Burkholderia pseudomallei K96243 Fis family transcriptional regulator YP_106977.1 373423 D 272560 CDS YP_106978.1 53717992 3092931 374548..375561 1 NC_006350.1 Similar to Salmonella typhimurium sulfate-binding protein precursor Sbp SWALL:SUBI_SALTY (SWALL:P02906) (329 aa) fasta scores: E(): 3.4e-65, 55.52% id in 326 aa, and to Ralstonia solanacearum probable sulfate-binding precursor signal peptide protein rsc1336 or rs02858 SWALL:Q8XZQ9 (EMBL:AL646064) (336 aa) fasta scores: E(): 1.3e-68, 59.13% id in 323 aa. BPSL1839, 58.480% identity (60.606% ungapped) in 342 aa overlap; sulfate-binding protein 375561 sbp 3092931 sbp Burkholderia pseudomallei K96243 sulfate-binding protein YP_106978.1 374548 D 272560 CDS YP_106979.1 53717993 3092732 376064..377755 1 NC_006350.1 Similar to Ralstonia solanacearum probable carboxypeptidase rsc1003 or rs04289 SWALL:Q8Y0P0 (EMBL:AL646062) (543 aa) fasta scores: E(): 1e-43, 39.22% id in 543 aa, and to Deinococcus radiodurans carboxypeptidase-related protein dr0964 SWALL:Q9RVQ8 (EMBL:AE001948) (500 aa) fasta scores: E(): 2.7e-31, 33.75% id in 480 aa. CDS contains an extended N-terminal region is comparison to orthologues; hypothetical protein 377755 3092732 BPSL0353 Burkholderia pseudomallei K96243 hypothetical protein YP_106979.1 376064 D 272560 CDS YP_106980.1 53717994 3094087 377828..378232 1 NC_006350.1 Poor database matches. C-terminus is similar to the C-terminal region of Ralstonia solanacearum calcium binding signal peptide protein rsc3104 or rs00557 SWALL:Q8XUT1 (EMBL:AL646073) (194 aa) fasta scores: E(): 0.077, 39.47% id in 76 aa; hypothetical protein 378232 3094087 BPSL0354 Burkholderia pseudomallei K96243 hypothetical protein YP_106980.1 377828 D 272560 CDS YP_106981.1 53717995 3094088 378316..379317 1 NC_006350.1 Similar to Ralstonia solanacearum ATP-sensitive inward rectifier potassium channel related transmembrane protein rsc0450 or rs04452 SWALL:Q8Y286 (EMBL:AL646059) (307 aa) fasta scores: E(): 1.6e-79, 71.08% id in 294 aa, and to Anabaena sp. hypothetical protein all0954 SWALL:Q8YY97 (EMBL:AP003584) (303 aa) fasta scores: E(): 1e-45, 43% id in 293 aa; inward rectifier potassium channel protein 379317 3094088 BPSL0355 Burkholderia pseudomallei K96243 inward rectifier potassium channel protein YP_106981.1 378316 D 272560 CDS YP_106982.1 53717996 3094641 379534..383109 1 NC_006350.1 catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoacid ferredoxin oxidoreductase 383109 3094641 BPSL0356 Burkholderia pseudomallei K96243 2-oxoacid ferredoxin oxidoreductase YP_106982.1 379534 D 272560 CDS YP_106983.1 53717997 3094642 complement(383345..385012) 1 NC_006350.1 Similar to Yersinia pestis na(+)/h(+) exchanger protein ypo3630 SWALL:Q8ZAZ9 (EMBL:AJ414158) (549 aa) fasta scores: E(): 4e-91, 50.18% id in 556 aa, and to Escherichia coli na(+)/h(+) exchanger protein YjcE SWALL:YJCE_ECOLI (SWALL:P32703) (549 aa) fasta scores: E(): 2.3e-90, 49.27% id in 550 aa; sodium/hydrogen exchanger family protein 385012 3094642 BPSL0357 Burkholderia pseudomallei K96243 sodium/hydrogen exchanger family protein YP_106983.1 383345 R 272560 CDS YP_106984.1 53717998 3093114 385324..386613 1 NC_006350.1 Weakly similar to Clostridium acetobutylicum sensory protein, containing EAL-domain cac0322 SWALL:Q97M76 (EMBL:AE007546) (412 aa) fasta scores: E(): 1.3e-16, 23.65% id in 389 aa. C-terminal region is similar to and to Rhizobium loti hypothetical protein mll2537 SWALL:Q98I70 (EMBL:AP002999) (282 aa) fasta scores: E(): 7.1e-18, 37.22% id in 231 aa; hypothetical protein 386613 3093114 BPSL0358 Burkholderia pseudomallei K96243 hypothetical protein YP_106984.1 385324 D 272560 CDS YP_106985.1 53717999 3093115 387068..387448 1 NC_006350.1 Similar to the C-terminal region of Xanthomonas axonopodis hypothetical protein xac2194 SWALL:Q8PKH9 (EMBL:AE011856) (160 aa) fasta scores: E(): 3.3e-10, 38.65% id in 119 aa, and to the full length Brucella melitensis hypothetical membrane spanning protein bmei1195 SWALL:Q8YGG4 (EMBL:AE009558) (142 aa) fasta scores: E(): 5.7, 29.2% id in 113 aa; hypothetical protein 387448 3093115 BPSL0359 Burkholderia pseudomallei K96243 hypothetical protein YP_106985.1 387068 D 272560 CDS YP_106986.1 53718000 3092645 387744..389183 1 NC_006350.1 Similar to an internal region of Homo sapiens alkaline phosphatase, placental type 1 precursor ALPP or PLAP SWALL:PPB1_HUMAN (SWALL:P05187) (535 aa) fasta scores: E(): 2e-16, 37.23% id in 470 aa, and to the full length Ralstonia solanacearum alkaline phosphatase lipoprotein transmembrane rsc0097 or rs02267 SWALL:Q8Y383 (EMBL:AL646057) (483 aa) fasta scores: E(): 2e-99, 63.03% id in 487 aa. Similar to BPSL0361, 56.639% identity (61.625% ungapped) in 482 aa overlap; alkaline phosphatase 389183 3092645 BPSL0360 Burkholderia pseudomallei K96243 alkaline phosphatase YP_106986.1 387744 D 272560 CDS YP_106987.1 53718001 3092646 389216..390619 1 NC_006350.1 Similar to an internal region of Homo sapiens alkaline phosphatase, placental type 1 precursor ALPP or PLAP SWALL:PPB1_HUMAN (SWALL:P05187) (535 aa) fasta scores: E(): 2.7e-32, 35.45% id in 471 aa, and to the full length Ralstonia solanacearum alkaline phosphatase signal peptide protein rsc0098 or rs02280 SWALL:Q8Y382 (EMBL:AL646057) (467 aa) fasta scores: E(): 1.6e-98, 62.92% id in 472 aa. Similar to BPSL0360, 56.432% identity (61.400% ungapped) in 482 aa overlap; alkaline phosphatase 390619 3092646 BPSL0361 Burkholderia pseudomallei K96243 alkaline phosphatase YP_106987.1 389216 D 272560 CDS YP_106988.1 53718002 3092474 390649..391455 1 NC_006350.1 Poor database matches. Similar to Ralstonia solanacearum signal peptide protein rsc0099 or rs02268 SWALL:Q8Y381 (EMBL:AL646057) (232 aa) fasta scores: E(): 0.0083, 35.54% id in 256 aa; hypothetical protein 391455 3092474 BPSL0362 Burkholderia pseudomallei K96243 hypothetical protein YP_106988.1 390649 D 272560 CDS YP_106989.1 53718003 3092475 391828..392541 1 NC_006350.1 Similar to Escherichia coli copper homeostasis protein CutC SWALL:CUTC_ECOLI (SWALL:P46719) (248 aa) fasta scores: E(): 3.3e-17, 36.17% id in 235 aa, and to Caulobacter crescentus hypothetical protein CC2360 SWALL:Q9A5T7 (EMBL:AE005905) (245 aa) fasta scores: E(): 2e-21, 41.23% id in 211 aa; CutC family protein 392541 3092475 BPSL0363 Burkholderia pseudomallei K96243 CutC family protein YP_106989.1 391828 D 272560 CDS YP_106990.1 53718004 3094556 complement(392668..393687) 1 NC_006350.1 Similar to Escherichia coli biotin synthase BioB SWALL:BIOB_ECOLI (SWALL:P12996) (346 aa) fasta scores: E(): 5.2e-80, 61.58% id in 315 aa, and to Ralstonia solanacearum probable biotin synthase rsc0266 or rs03233 SWALL:Q8Y2R9 (EMBL:AL646058) (360 aa) fasta scores: E(): 1e-98, 74.37% id in 320 aa; biotin synthase 393687 bioB 3094556 bioB Burkholderia pseudomallei K96243 biotin synthase YP_106990.1 392668 R 272560 CDS YP_106991.1 53718005 3093350 complement(393751..394473) 1 NC_006350.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 394473 bioD 3093350 bioD Burkholderia pseudomallei K96243 dithiobiotin synthetase YP_106991.1 393751 R 272560 CDS YP_106992.1 53718006 3093351 complement(394470..395654) 1 NC_006350.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 395654 bioF 3093351 bioF Burkholderia pseudomallei K96243 8-amino-7-oxononanoate synthase YP_106992.1 394470 R 272560 CDS YP_106993.1 53718007 3092139 complement(395651..396997) 1 NC_006350.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 396997 bioA 3092139 bioA Burkholderia pseudomallei K96243 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_106993.1 395651 R 272560 CDS YP_106994.1 53718008 3091532 complement(397561..398844) 1 NC_006350.1 Internal region is similar to Ralstonia solanacearum hypothetical signal peptide protein rsc0268 or rs03235 SWALL:Q8Y2R7 (EMBL:AL646058) (308 aa) fasta scores: E(): 6.1e-43, 48.32% id in 269 aa, and weakly similar to Caulobacter crescentus hypothetical protein cc0087 SWALL:Q9ABY3 (EMBL:AE005683) (252 aa) fasta scores: E(): 0.00019, 30.08% id in 236 aa; peptidase 398844 3091532 BPSL0368 Burkholderia pseudomallei K96243 peptidase YP_106994.1 397561 R 272560 CDS YP_106995.1 53718009 3091533 complement(399073..399525) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0270 or rs03237 SWALL:Q8Y2R5 (EMBL:AL646058) (144 aa) fasta scores: E(): 3.7e-25, 56.37% id in 149 aa, and to Xanthomonas campestris hypothetical protein xcc4159 SWALL:AAM43375 (EMBL:AE012541) (129 aa) fasta scores: E(): 3.1e-14, 48.57% id in 140 aa; hypothetical protein 399525 3091533 BPSL0369 Burkholderia pseudomallei K96243 hypothetical protein YP_106995.1 399073 R 272560 CDS YP_106996.1 53718010 3092742 complement(399557..400234) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical oxidoreductase rsc0275 or rs03242 SWALL:Q8Y2R0 (EMBL:AL646058) (236 aa) fasta scores: E(): 3.1e-41, 57.75% id in 232 aa. C-terminal region is similar to Myxococcus xanthus C-factor cell-cell signaling protein CsgA or SpoC SWALL:CSGA_MYXXA (SWALL:P21158) (166 aa) fasta scores: E(): 5.8e-11, 37.86% id in 169 aa; short chain dehydrogenase 400234 3092742 BPSL0370 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_106996.1 399557 R 272560 CDS YP_106997.1 53718011 3092743 complement(400265..401458) 1 NC_006350.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 401458 3092743 BPSL0371 Burkholderia pseudomallei K96243 acetyl-CoA acetyltransferase YP_106997.1 400265 R 272560 CDS YP_106998.1 53718012 3092418 complement(401445..402215) 1 NC_006350.1 Similar to Ralstonia solanacearum probable carbonic anhydrase rsc0277 or rs03244 SWALL:Q8Y2Q8 (EMBL:AL646058) (226 aa) fasta scores: E(): 3.5e-55, 68.15% id in 201 aa, and to Xanthomonas axonopodis carbonic anhydrase xac1604 SWALL:AAM36472 (EMBL:AE011793) (220 aa) fasta scores: E(): 9.4e-54, 63.67% id in 212 aa. CDS is extended at the C-terminus in comparison to orthologues; carbonic anhydrase 402215 3092418 BPSL0372 Burkholderia pseudomallei K96243 carbonic anhydrase YP_106998.1 401445 R 272560 CDS YP_106999.1 53718013 3092419 complement(402273..404084) 1 NC_006350.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase 404084 aceK 3092419 aceK Burkholderia pseudomallei K96243 bifunctional isocitrate dehydrogenase kinase/phosphatase YP_106999.1 402273 R 272560 CDS YP_107000.1 53718014 3093229 404374..405453 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0281 or rs03248 SWALL:Q8Y2Q4 (EMBL:AL646058) (359 aa) fasta scores: E(): 4.5e-99, 65.45% id in 359 aa, and to Caulobacter crescentus metallo-beta-lactamase cc0395 SWALL:Q9AB39 (EMBL:AE005712) (317 aa) fasta scores: E(): 1.2e-40, 42.54% id in 322 aa. CDS is extended at the N-terminus in comparison to the C. crescentus protein; metallo-beta-lactamase superfamily protein 405453 3093229 BPSL0374 Burkholderia pseudomallei K96243 metallo-beta-lactamase superfamily protein YP_107000.1 404374 D 272560 CDS YP_107001.1 53718015 3093230 complement(405732..407378) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa1425 SWALL:Q9I3R9 (EMBL:AE004572) (538 aa) fasta scores: E(): 4.1e-65, 45.23% id in 535 aa. Weakly similar to Staphylococcus epidermidis erythromycin resistance ATP-binding protein MsrA SWALL:MSRA_STAEP (SWALL:P23212) (488 aa) fasta scores: E(): 5e-11, 25.83% id in 542 aa; ABC transport system ATP-binding protein 407378 3093230 BPSL0375 Burkholderia pseudomallei K96243 ABC transport system ATP-binding protein YP_107001.1 405732 R 272560 CDS YP_107002.1 53718016 3092891 complement(407612..409198) 1 NC_006350.1 Similar to Escherichia coli periplasmic dipeptide transport protein precursor DppA SWALL:DPPA_ECOLI (SWALL:P23847) (535 aa) fasta scores: E(): 2.1e-90, 43.59% id in 523 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC dipeptide transporter pa5317 SWALL:Q9HTN7 (EMBL:AE004944) (526 aa) fasta scores: E(): 8.9e-134, 63.51% id in 529 aa; ABC transporter substrate-binding protein 409198 3092891 BPSL0376 Burkholderia pseudomallei K96243 ABC transporter substrate-binding protein YP_107002.1 407612 R 272560 CDS YP_107003.1 53718017 3092892 complement(409296..409979) 1 NC_006350.1 Similar to the N-terminal regions of Ralstonia solanacearum probable acetyl-CoA acetyltransferase rsc0276 or rs03243 SWALL:Q8Y2Q9 (EMBL:AL646058) (393 aa) fasta scores: E(): 4.5e-14, 39.81% id in 211 aa, and Pseudomonas aeruginosa probable acyl-CoA thiolase pa2553 SWALL:Q9I0T1 (EMBL:AE004683) (396 aa) fasta scores: E(): 2e-12, 37.93% id in 203 aa; hypothetical protein 409979 3092892 BPSL0377 Burkholderia pseudomallei K96243 hypothetical protein YP_107003.1 409296 R 272560 CDS YP_107004.1 53718018 3093026 complement(410175..410642) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1285 SWALL:Q9I459 (EMBL:AE004558) (149 aa) fasta scores: E(): 8.6e-12, 34.89% id in 149 aa, and to Agrobacterium tumefaciens transcriptional regulator, MarR family atu0852 or agr_c_1559 SWALL:Q8UH33 (EMBL:AE009052) (148 aa) fasta scores: E(): 5e-08, 33.33% id in 141 aa. Possible alternative translational start site; MarR family transcriptional regulator 410642 3093026 BPSL0378 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_107004.1 410175 R 272560 CDS YP_107005.1 53718019 3093027 410881..411594 1 NC_006350.1 Similar to Streptomyces exfoliatus 20-beta-hydroxysteroid dehydrogenase SWALL:2BHD_STREX (SWALL:P19992) (255 aa) fasta scores: E(): 2.2e-09, 28.86% id in 246 aa, and to Streptomyces albus oxidoreductase homologue SitS SWALL:Q9RPT7 (EMBL:AF145724) (223 aa) fasta scores: E(): 6.8e-34, 49.33% id in 225 aa; short chain dehydrogenase 411594 3093027 BPSL0379 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_107005.1 410881 D 272560 CDS YP_107006.1 53718020 3092047 complement(411739..412518) 1 NC_006350.1 Similar to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase rsc0284 or rs03251 SWALL:Q8Y2Q1 (EMBL:AL646058) (266 aa) fasta scores: E(): 6e-36, 62.64% id in 257 aa, and to Mycobacterium tuberculosis oxidoreductase rv0945 or mt0971 or MTCY10D7.29c SWALL:Y945_MYCTU (SWALL:P71564) (253 aa) fasta scores: E(): 4.9e-18, 34.28% id in 245 aa; short chain dehydrogenase 412518 3092047 BPSL0380 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_107006.1 411739 R 272560 CDS YP_107007.1 53718021 3093149 complement(412535..413173) 1 NC_006350.1 Similar to Burkholderia cepacia thiol:disulfide interchange protein DsbA SWALL:DSBA_BURCE (SWALL:Q9RHV8) (212 aa) fasta scores: E(): 5.7e-73, 87.73% id in 212 aa, and to Ralstonia solanacearum probable thiol:disulfide interchange signal peptide protein rsc0285 or rs03252 SWALL:Q8Y2Q0 (EMBL:AL646058) (218 aa) fasta scores: E(): 8e-39, 50.22% id in 221 aa; thiol:disulfide interchange protein 413173 dsbA 3093149 dsbA Burkholderia pseudomallei K96243 thiol:disulfide interchange protein YP_107007.1 412535 R 272560 CDS YP_107008.1 53718022 3092048 complement(413225..414073) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0286 or rs03253 SWALL:Q8Y2P9 (EMBL:AL646058) (238 aa) fasta scores: E(): 3.5e-09, 40.9% id in 286 aa, and to Xanthomonas campestris hypothetical protein xcc3862 SWALL:AAM43093 (EMBL:AE012507) (286 aa) fasta scores: E(): 1.5e-06, 30.61% id in 294 aa; hypothetical protein 414073 3092048 BPSL0382 Burkholderia pseudomallei K96243 hypothetical protein YP_107008.1 413225 R 272560 CDS YP_107009.1 53718023 3093875 complement(414152..415936) 1 NC_006350.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 415936 argS 3093875 argS Burkholderia pseudomallei K96243 arginyl-tRNA synthetase YP_107009.1 414152 R 272560 CDS YP_107010.1 53718024 3092817 416139..416462 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0288 or rs03255 SWALL:Q8Y2P7 (EMBL:AL646058) (105 aa) fasta scores: E(): 3.5e-11, 42.72% id in 110 aa; hypothetical protein 416462 3092817 BPSL0384 Burkholderia pseudomallei K96243 hypothetical protein YP_107010.1 416139 D 272560 CDS YP_107011.1 53718025 3091951 complement(416706..419408) 1 NC_006350.1 Similar to Ralstonia solanacearum probable 5-methyltetrahydrofolate--homocysteine methyltransferase rsc0294 or rs03261 SWALL:Q8Y2P1 (EMBL:AL646058) (905 aa) fasta scores: E(): 0, 83.75% id in 905 aa, and to the C-terminal region of Escherichia coli 5-methyltetrahydrofolate--homocysteine methyltransferase MetH SWALL:METH_ECOLI (SWALL:P13009) (1226 aa) fasta scores: E(): 1.7e-129, 62.72% id in 904 aa. BPSL0385 and BPSL03856 are similar to the N- and C-terminal regions of many 5-methyltetrahydrofolate--homocysteine methyltransferases. In some organisms these two domains are also found as separate coding sequences. Effect on the function of CDSs is not known; 5-methyltetrahydrofolate--homocysteine methyltransferase 419408 metH1 3091951 metH1 Burkholderia pseudomallei K96243 5-methyltetrahydrofolate--homocysteine methyltransferase YP_107011.1 416706 R 272560 CDS YP_107012.1 53718026 3093220 complement(419469..420548) 1 NC_006350.1 Similar to Ralstonia solanacearum probable 5-methyltetrahydrofolate--homocysteine methyltransferase rsc0295 or rs03262 SWALL:Q8Y2P0 (EMBL:AL646058) (346 aa) fasta scores: E(): 2.9e-107, 80.29% id in 345 aa, and to the N-terminal region Escherichia coli 5-methyltetrahydrofolate--homocysteine methyltransferase MetH SWALL:METH_ECOLI (SWALL:P13009) (1226 aa) fasta scores: E(): 3.2e-72, 59.07% id in 325 aa. BPSL0385 and BPSL03856 are similar to the N- and C-terminal regions of many 5-methyltetrahydrofolate--homocysteine methyltransferases. In some organisms these two domains are also found as separate coding sequences. Effect on the function of CDSs is not known; 5-methyltetrahydrofolate--homocysteine methyltransferase 420548 metH2 3093220 metH2 Burkholderia pseudomallei K96243 5-methyltetrahydrofolate--homocysteine methyltransferase YP_107012.1 419469 R 272560 CDS YP_107013.1 53718027 3092818 complement(420737..420994) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0297 or rs03264 SWALL:Q8Y2N8 (EMBL:AL646058) (85 aa) fasta scores: E(): 7.8e-19, 68.6% id in 86 aa. Possible alternative translational start sites; hypothetical protein 420994 3092818 BPSL0387 Burkholderia pseudomallei K96243 hypothetical protein YP_107013.1 420737 R 272560 CDS YP_107014.1 53718028 3093932 complement(421177..422445) 1 NC_006350.1 Similar to Ralstonia solanacearum prolin-rich signal peptide protein rsc0299 or rs03266 SWALL:Q8Y2N6 (EMBL:AL646058) (355 aa) fasta scores: E(): 3e-17, 42.35% id in 366 aa; hypothetical protein 422445 3093932 BPSL0388 Burkholderia pseudomallei K96243 hypothetical protein YP_107014.1 421177 R 272560 CDS YP_107015.1 53718029 3093933 complement(422575..423438) 1 NC_006350.1 Similar to Streptomyces coelicolor glycerol operon regulatory protein GylR SWALL:GYLR_STRCO (SWALL:P15360) (254 aa) fasta scores: E(): 8e-11, 32.04% id in 259 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0300 or rs03267 SWALL:Q8Y2N5 (EMBL:AL646058) (290 aa) fasta scores: E(): 1.6e-52, 55% id in 280 aa. CDS is extended at the N-terminus in comparison to S coelicolor protein; IclR family transcriptional regulator 423438 3093933 BPSL0389 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_107015.1 422575 R 272560 CDS YP_107016.1 53718030 3092780 423548..424540 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0301 or rs03268 SWALL:Q8Y2N4 (EMBL:AL646058) (330 aa) fasta scores: E(): 5.7e-101, 76.22% id in 328 aa, and to Xanthomonas campestris dioxygenase xcc0591 SWALL:AAM39907 (EMBL:AF204145) (329 aa) fasta scores: E(): 6e-75, 60.99% id in 323 aa; fumarylacetoacetate (FAA) hydrolase 424540 3092780 BPSL0390 Burkholderia pseudomallei K96243 fumarylacetoacetate (FAA) hydrolase YP_107016.1 423548 D 272560 CDS YP_107017.1 53718031 3092781 424759..425586 1 NC_006350.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 425586 3092781 BPSL0391 Burkholderia pseudomallei K96243 enoyl-CoA hydratase YP_107017.1 424759 D 272560 CDS YP_107018.1 53718032 3091454 425676..426467 1 NC_006350.1 Poor database matches. similar to Ralstonia solanacearum hypothetical protein rsc0305 or rs03272 SWALL:Q8Y2N0 (EMBL:AL646058) (294 aa) fasta scores: E(): 3.2e-07, 37.15% id in 288 aa. C-terminus is similar to the C-terminal region of Pseudomonas aeruginosa polyhydroxyalkanoate synthesis protein pa5060 SWALL:Q9HUC3 (EMBL:AE004919) (309 aa) fasta scores: E(): 0.011, 33.95% id in 215 aa; hypothetical protein 426467 3091454 BPSL0392 Burkholderia pseudomallei K96243 hypothetical protein YP_107018.1 425676 D 272560 CDS YP_107019.1 53718033 3091455 426504..427748 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0306 or rs03273 SWALL:Q8Y2M9 (EMBL:AL646058) (391 aa) fasta scores: E(): 2.6e-77, 53.66% id in 382 aa, and to Pseudomonas aeruginosa hypothetical protein pa3241 SWALL:Q9HYZ9 (EMBL:AE004747) (389 aa) fasta scores: E(): 9.9e-52, 42.33% id in 385 aa; patatin-like phospholipase 427748 3091455 BPSL0393 Burkholderia pseudomallei K96243 patatin-like phospholipase YP_107019.1 426504 D 272560 CDS YP_107020.1 53718034 3093845 428396..429271 1 NC_006350.1 Similar to Burkholderia cepacia hypothetical protein SWALL:Q9ZGQ4 (EMBL:AF076477) (283 aa) fasta scores: E(): 7e-108, 92.72% id in 275 aa, and to Ralstonia solanacearum hypothetical protein rsc0308 or rs03275 SWALL:Q8Y2M7 (EMBL:AL646058) (289 aa) fasta scores: E(): 1.1e-102, 84.08% id in 289 aa; hypothetical protein 429271 3093845 BPSL0394 Burkholderia pseudomallei K96243 hypothetical protein YP_107020.1 428396 D 272560 CDS YP_107021.1 53718035 3093846 429412..429897 1 NC_006350.1 Similar to Alcaligenes eutrophus protein required for both lithoautotrophic (hydrogen plus carbon dioxide) and organoautotrophic (formate) growth Aut SWALL:Q43999 (EMBL:U07639) (164 aa) fasta scores: E(): 5.4e-39, 69.32% id in 163 aa, and to Ralstonia solanacearum transferase rsc0309 or rs03276 SWALL:Q8Y2M6 (EMBL:AL646058) (166 aa) fasta scores: E(): 8.9e-40, 70.18% id in 161 aa; cytidylyltransferase 429897 3093846 BPSL0395 Burkholderia pseudomallei K96243 cytidylyltransferase YP_107021.1 429412 D 272560 CDS YP_107022.1 53718036 3092275 complement(429943..430365) 1 NC_006350.1 hypothetical protein 430365 3092275 BPSL0396 Burkholderia pseudomallei K96243 hypothetical protein YP_107022.1 429943 R 272560 CDS YP_107023.1 53718037 3092276 complement(430475..431254) 1 NC_006350.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 431254 3092276 BPSL0397 Burkholderia pseudomallei K96243 pantothenate kinase YP_107023.1 430475 R 272560 CDS YP_107024.1 53718038 3093583 complement(431251..432210) 1 NC_006350.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 432210 3093583 BPSL0398 Burkholderia pseudomallei K96243 biotin--protein ligase YP_107024.1 431251 R 272560 CDS YP_107025.1 53718039 3093584 complement(432591..433478) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc3362 or rs02637 SWALL:Q8XU32 (EMBL:AL646074) (276 aa) fasta scores: E(): 2.6e-50, 63.32% id in 259 aa; hypothetical protein 433478 3093584 BPSL0399 Burkholderia pseudomallei K96243 hypothetical protein YP_107025.1 432591 R 272560 CDS YP_107026.1 53718040 3091766 complement(433552..435612) 1 NC_006350.1 Similar to Escherichia coli 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor CpdB SWALL:CN16_ECOLI (SWALL:P08331) (647 aa) fasta scores: E(): 3.5e-61, 43.32% id in 674 aa, and to Ralstonia solanacearum probable 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor transmembrane protein rsc3363 or rs02638 SWALL:Q8XU31 (EMBL:AL646074) (681 aa) fasta scores: E(): 5.9e-215, 81.63% id in 675 aa; 2',3'-cyclic-nucleotide 2'-phosphodiesterase 435612 cpdB 3091766 cpdB Burkholderia pseudomallei K96243 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_107026.1 433552 R 272560 CDS YP_107027.1 53718041 3094331 435878..437002 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0313 or rs03280 SWALL:Q8Y2M2 (EMBL:AL646058) (374 aa) fasta scores: E(): 5.2e-80, 60.81% id in 370 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa3211 SWALL:Q9HZ29 (EMBL:AE004744) (381 aa) fasta scores: E(): 2.4e-33, 35.67% id in 384 aa; hypothetical protein 437002 3094331 BPSL0401 Burkholderia pseudomallei K96243 hypothetical protein YP_107027.1 435878 D 272560 CDS YP_107028.1 53718042 3094332 436999..437841 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc0314 or rs03281 SWALL:Q8Y2M1 (EMBL:AL646058) (298 aa) fasta scores: E(): 5.7e-54, 61.97% id in 263 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa3212 SWALL:Q9HZ28 (EMBL:AE004744) (264 aa) fasta scores: E(): 8.9e-44, 52.29% id in 262 aa. CDS is truncated at the N-terminus in comparison to some orthologue; ABC transporter ATP-binding protein 437841 3094332 BPSL0402 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_107028.1 436999 D 272560 CDS YP_107029.1 53718043 3092402 437865..438794 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsc0315 or rs03282 SWALL:Q8Y2M0 (EMBL:AL646058) (330 aa) fasta scores: E(): 3.9e-31, 44.86% id in 321 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3213 pa3213 SWALL:Q9HZ27 (EMBL:AE004744) (312 aa) fasta scores: E(): 5.7e-10, 25.9% id in 305 aa; mce-like protein 438794 3092402 BPSL0403 Burkholderia pseudomallei K96243 mce-like protein YP_107029.1 437865 D 272560 CDS YP_107030.1 53718044 3092403 438828..439451 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein rsc0316 or rs03283 SWALL:Q8Y2L9 (EMBL:AL646058) (211 aa) fasta scores: E(): 1.2e-17, 38.3% id in 201 aa, and to Pseudomonas aeruginosa hypothetical protein pa3214 SWALL:Q9HZ26 (EMBL:AE004744) (214 aa) fasta scores: E(): 2.2e-05, 28.15% id in 206 aa; lipoprotein 439451 3092403 BPSL0404 Burkholderia pseudomallei K96243 lipoprotein YP_107030.1 438828 D 272560 CDS YP_107031.1 53718045 3092793 439483..440694 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0317 or rs03284 SWALL:Q8Y2L8 (EMBL:AL646058) (408 aa) fasta scores: E(): 2.6e-53, 44.02% id in 393 aa; hypothetical protein 440694 3092793 BPSL0405 Burkholderia pseudomallei K96243 hypothetical protein YP_107031.1 439483 D 272560 CDS YP_107032.1 53718046 3092794 440800..441129 1 NC_006350.1 Similar to Clostridium pasteurianum ferredoxin, 2Fe-2S SWALL:FER2_CLOPA (SWALL:P07324) (102 aa) fasta scores: E(): 7.4e-13, 42% id in 100 aa, and to Ralstonia solanacearum ferredoxin 2Fe-2S protein rsc0329 or rs03296 SWALL:Q8Y2K6 (EMBL:AL646058) (108 aa) fasta scores: E(): 3.7e-27, 65.71% id in 105 aa; ferredoxin 441129 3092794 BPSL0406 Burkholderia pseudomallei K96243 ferredoxin YP_107032.1 440800 D 272560 CDS YP_107033.1 53718047 3091692 441177..441821 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0328 or rs03295 SWALL:Q8Y2K7 (EMBL:AL646058) (215 aa) fasta scores: E(): 7.7e-54, 66.35% id in 217 aa, and to Neisseria meningitidis hypothetical protein nma1086 SWALL:Q9JUY1 (EMBL:AL162755) (213 aa) fasta scores: E(): 9.5e-22, 39.23% id in 209 aa; hypothetical protein 441821 3091692 BPSL0407 Burkholderia pseudomallei K96243 hypothetical protein YP_107033.1 441177 D 272560 CDS YP_107034.1 53718048 3091693 442663..443874 1 NC_006350.1 Similar to Escherichia coli penicillin-binding protein 6 precursor DacC SWALL:DACC_ECOLI (SWALL:P08506) (400 aa) fasta scores: E(): 5.8e-48, 42.21% id in 379 aa, and to Ralstonia solanacearum probable penicillin-binding rsc0327 or rs03294 SWALL:Q8Y2K8 (EMBL:AL646058) (397 aa) fasta scores: E(): 1.8e-79, 58.8% id in 403 aa; penicillin-binding protein 6 443874 3091693 BPSL0408 Burkholderia pseudomallei K96243 penicillin-binding protein 6 YP_107034.1 442663 D 272560 CDS YP_107035.1 53718049 3091605 443964..444911 1 NC_006350.1 Similar to Bacillus licheniformis D-alanine aminotransferase Dat SWALL:DAAA_BACLI (SWALL:P54692) (283 aa) fasta scores: E(): 8.7e-28, 40.42% id in 282 aa, and to Listeria innocua D-alanine aminotransferase lin1660 SWALL:DAAA_LISIN (SWALL:Q92B90) (289 aa) fasta scores: E(): 1.8e-27, 36.74% id in 283 aa; D-amino acid aminotransferase 444911 3091605 BPSL0409 Burkholderia pseudomallei K96243 D-amino acid aminotransferase YP_107035.1 443964 D 272560 CDS YP_107036.1 53718050 3091606 444908..445216 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0326 or rs03293 SWALL:Q8Y2K9 (EMBL:AL646058) (97 aa) fasta scores: E(): 4.2e-17, 53.92% id in 102 aa, and to Neisseria meningitidis hypothetical protein nma1380 or nmb1218 SWALL:Q9JRI4 (EMBL:AL162755) (91 aa) fasta scores: E(): 3.9e-15, 54.11% id in 85 aa; hypothetical protein 445216 3091606 BPSL0410 Burkholderia pseudomallei K96243 hypothetical protein YP_107036.1 444908 D 272560 CDS YP_107037.1 53718051 3092092 complement(445227..446192) 1 NC_006350.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 446192 3092092 BPSL0411 Burkholderia pseudomallei K96243 DNA-binding transcriptional activator GcvA YP_107037.1 445227 R 272560 CDS YP_107038.1 53718052 3092093 446293..446619 1 NC_006350.1 Poor database matches. Weakly similar to Ralstonia solanacearum hypothetical protein rsc0324 or rs03291 SWALL:Q8Y2L1 (EMBL:AL646058) (119 aa) fasta scores: E(): 0.0043, 29.35% id in 109 aa; hypothetical protein 446619 3092093 BPSL0412 Burkholderia pseudomallei K96243 hypothetical protein YP_107038.1 446293 D 272560 CDS YP_107039.2 161723211 3091586 446688..447452 1 NC_006350.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 447452 lipB 3091586 lipB Burkholderia pseudomallei K96243 lipoate-protein ligase B YP_107039.2 446688 D 272560 CDS YP_107040.1 53718054 3091431 447445..448434 1 NC_006350.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 448434 lipA 3091431 lipA Burkholderia pseudomallei K96243 lipoyl synthase YP_107040.1 447445 D 272560 CDS YP_107041.1 53718055 3091829 complement(449010..450893) 1 NC_006350.1 Similar to Bacillus subtilis gamma-glutamyltranspeptidase precursor Ggt SWALL:GGT_BACSU (SWALL:P54422) (587 aa) fasta scores: E(): 9.3e-32, 34.66% id in 600 aa, and to Ralstonia solanacearum probable gamma-glutamyltranspeptidase precursor protein rsc2921 or rs00172 SWALL:Q8XVB0 (EMBL:AL646072) (623 aa) fasta scores: E(): 8.5e-98, 54.25% id in 599 aa; hypothetical protein 450893 3091829 BPSL0416 Burkholderia pseudomallei K96243 hypothetical protein YP_107041.1 449010 R 272560 CDS YP_107042.1 53718056 3093255 451783..452124 1 NC_006350.1 Poor database matches. Similar to the C-terminal region of Caulobacter crescentus hypothetical protein cc1436 SWALL:Q9A8B8 (EMBL:AE005818) (314 aa) fasta scores: E(): 1.9, 31.57% id in 114 aa; hypothetical protein 452124 3093255 BPSL0417 Burkholderia pseudomallei K96243 hypothetical protein YP_107042.1 451783 D 272560 CDS YP_107043.1 53718057 3093256 complement(452345..453247) 1 NC_006350.1 Similar to Rhizobium loti transcriptional regulator mlr2977 SWALL:Q98H90 (EMBL:AP003000) (299 aa) fasta scores: E(): 3.2e-24, 32.88% id in 298 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0910 or rs01682 SWALL:Q8XRE4 (EMBL:AL646081) (309 aa) fasta scores: E(): 9e-24, 29.83% id in 295 aa; LysR family transcriptional regulator 453247 3093256 BPSL0418 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107043.1 452345 R 272560 CDS YP_107044.1 53718058 3093098 453402..455528 1 NC_006350.1 Similar to Cavia porcellus peroxisomal bifunctional enzyme [includes: enoyl-CoA hydratase; 3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase] EHHADH SWALL:ECHP_CAVPO (SWALL:P55100) (725 aa) fasta scores: E(): 2.1e-66, 40.82% id in 703 aa, and to Rhizobium loti enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase mll4199 SWALL:Q98EK7 (EMBL:AP003003) (689 aa) fasta scores: E(): 1.1e-111, 50.14% id in 698 aa; trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase 455528 3093098 BPSL0419 Burkholderia pseudomallei K96243 trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase YP_107044.1 453402 D 272560 CDS YP_107045.1 53718059 3093099 455583..456791 1 NC_006350.1 Similar to Ralstonia solanacearum acyl-CoA dehydrogenase oxidoreductase rsc2045 or rs03610 SWALL:Q8XXR8 (EMBL:AL646068) (398 aa) fasta scores: E(): 3.9e-95, 59.2% id in 402 aa, and to Caulobacter crescentus acyl-CoA dehydrogenase cc1310 SWALL:Q9A8P3 (EMBL:AE005806) (404 aa) fasta scores: E(): 9.4e-81, 49.87% id in 407 aa. Similar to BPSL1228, 58.209% identity (58.794% ungapped) in 402 aa overlap; hypothetical protein 456791 3093099 BPSL0420 Burkholderia pseudomallei K96243 hypothetical protein YP_107045.1 455583 D 272560 CDS YP_107046.1 53718060 3091731 456801..457931 1 NC_006350.1 Similar to Ralstonia solanacearum acyl-CoA dehydrogenase oxidoreductase rsc2044 or rs03609 SWALL:Q8XXR9 (EMBL:AL646068) (376 aa) fasta scores: E(): 9e-59, 49.06% id in 373 aa, and to Caulobacter crescentus acyl-CoA dehydrogenase cc1807 SWALL:Q9A7B7 (EMBL:AE005855) (382 aa) fasta scores: E(): 1.7e-42, 38.68% id in 380 aa; hypothetical protein 457931 3091731 BPSL0421 Burkholderia pseudomallei K96243 hypothetical protein YP_107046.1 456801 D 272560 CDS YP_107047.1 53718061 3091732 457957..459162 1 NC_006350.1 Similar to Rhizobium meliloti conserved membrane-anchored protein rb0848 or smb21182 SWALL:Q92V66 (EMBL:AL603645) (394 aa) fasta scores: E(): 1.7e-62, 44.33% id in 388 aa, and to Sphingomonas aromaticivorans hypothetical protein ORF1338 SWALL:O86014 (EMBL:AF079317) (388 aa) fasta scores: E(): 1.9e-57, 44.74% id in 371 aa; CAIB/BAIF family protein 459162 3091732 BPSL0422 Burkholderia pseudomallei K96243 CAIB/BAIF family protein YP_107047.1 457957 D 272560 CDS YP_107048.1 53718062 3091996 459603..459908 1 NC_006350.1 Similar to Salmonella typhi membrane protein sty4472 SWALL:Q8Z1R1 (EMBL:AL627282) (104 aa) fasta scores: E(): 5.9e-10, 36.36% id in 99 aa, and to Salmonella typhimurium inner membrane protein stm4274 SWALL:Q8ZKF7 (EMBL:AE008900) (104 aa) fasta scores: E(): 5.9e-10, 36.36% id in 99 aa; hypothetical protein 459908 3091996 BPSL0423 Burkholderia pseudomallei K96243 hypothetical protein YP_107048.1 459603 D 272560 CDS YP_107049.1 53718063 3091997 459920..461635 1 NC_006350.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 461635 actP 3091997 actP Burkholderia pseudomallei K96243 acetate permease YP_107049.1 459920 D 272560 CDS YP_107050.1 53718064 3094703 462003..463289 1 NC_006350.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 463289 dctA 3094703 dctA Burkholderia pseudomallei K96243 C4-dicarboxylate transporter DctA YP_107050.1 462003 D 272560 CDS YP_107051.1 53718065 3094345 463292..465325 1 NC_006350.1 Possible alternative translational start site. Similar to Rhizobium leguminosarum C4-dicarboxylate transport sensor protein DctB SWALL:DCTB_RHILE (SWALL:P10047) (622 aa) fasta scores: E(): 8.5e-47, 37.99% id in 629 aa, and to Ralstonia solanacearum probable C4-dicarboxylate transport sensor kinase transcription regulator protein rsc0331 or rs03298 SWALL:Q8Y2K4 (EMBL:AL646058) (665 aa) fasta scores: E(): 5.9e-57, 55.17% id in 667 aa; C4-dicarboxylate transport sensor protein 465325 dctB 3094345 dctB Burkholderia pseudomallei K96243 C4-dicarboxylate transport sensor protein YP_107051.1 463292 D 272560 CDS YP_107052.1 53718066 3091579 465374..466729 1 NC_006350.1 Similar to Rhizobium meliloti C4-dicarboxylate transport transcriptional regulatory protein DctD SWALL:DCTD_RHIME (SWALL:P13632) (460 aa) fasta scores: E(): 7.2e-76, 49.23% id in 455 aa, and to Ralstonia solanacearum probable C4-dicarboxylate transport response regulator transcription regulator protein rsc0332 or rs03299 SWALL:Q8Y2K3 (EMBL:AL646058) (438 aa) fasta scores: E(): 4.8e-109, 69.81% id in 444 aa. Similar to BPSS0063, 52.715% identity (54.312% ungapped) in 442 aa overlap; C4-dicarboxylate transport transcriptional regulatory protein 466729 dctD 3091579 dctD Burkholderia pseudomallei K96243 C4-dicarboxylate transport transcriptional regulatory protein YP_107052.1 465374 D 272560 CDS YP_107053.1 53718067 3093439 complement(466845..467381) 1 NC_006350.1 Similar to Neisseria meningitidis periplasmic protein nma0493 SWALL:Q9JW89 (EMBL:AL162753) (162 aa) fasta scores: E(): 2.8e-17, 41.4% id in 157 aa, and to the C-terminal region of Ralstonia solanacearum transmembrane protein rsc0333 or rs03300 SWALL:Q8Y2K2 (EMBL:AL646058) (213 aa) fasta scores: E(): 5.4e-38, 60.77% id in 181 aa; hypothetical protein 467381 3093439 BPSL0428 Burkholderia pseudomallei K96243 hypothetical protein YP_107053.1 466845 R 272560 CDS YP_107054.1 53718068 3093440 467674..468264 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc0335 or rs03302 SWALL:Q8Y2K0 (EMBL:AL646058) (189 aa) fasta scores: E(): 1.2e-11, 36.86% id in 198 aa; hypothetical protein 468264 3093440 BPSL0429 Burkholderia pseudomallei K96243 hypothetical protein YP_107054.1 467674 D 272560 CDS YP_107055.1 53718069 3092430 complement(468950..469729) 1 NC_006350.1 Similar to Anabaena sp. hypothetical protein ALR2045 SWALL:Q8YVD3 (EMBL:AP003588) (253 aa) fasta scores: E(): 3.7e-19, 33.64% id in 214 aa, and to Pseudomonas fluorescens thioesterase PltG SWALL:Q9X3R5 (EMBL:AF081920) (260 aa) fasta scores: E(): 4.6e-18, 31.07% id in 251 aa; thioesterase 469729 3092430 BPSL0430 Burkholderia pseudomallei K96243 thioesterase YP_107055.1 468950 R 272560 CDS YP_107056.1 53718070 3092431 470210..470674 1 NC_006350.1 Similar to Vibrio cholerae hypothetical protein vca0382 SWALL:Q9KMH2 (EMBL:AE004374) (141 aa) fasta scores: E(): 4.6e-16, 42.06% id in 126 aa, and to Methanobacterium thermoautotrophicum N-terminal acetyltransferase complex, subunit Ard1 MTH999 SWALL:O27080 (EMBL:AE000872) (156 aa) fasta scores: E(): 0.0022, 31.46% id in 143 aa; acetyltransferase (GNAT) family protein 470674 3092431 BPSL0431 Burkholderia pseudomallei K96243 acetyltransferase (GNAT) family protein YP_107056.1 470210 D 272560 CDS YP_107057.1 53718071 3092499 complement(471119..472705) 1 NC_006350.1 Similar to Haemophilus influenzae competence protein ComM SWALL:COMM_HAEIN (SWALL:P45049) (509 aa) fasta scores: E(): 2.5e-43, 47.03% id in 523 aa, and to Ralstonia solanacearum probable mg(2+) chelatase rsc0338 or rs03305 SWALL:Q8Y2J7 (EMBL:AL646058) (510 aa) fasta scores: E(): 3.2e-67, 63.55% id in 524 aa; magnesium chelatase subunit 472705 3092499 BPSL0432 Burkholderia pseudomallei K96243 magnesium chelatase subunit YP_107057.1 471119 R 272560 CDS YP_107058.1 53718072 3092500 complement(472843..473094) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0340 or rs03307 SWALL:Q8Y2J5 (EMBL:AL646058) (87 aa) fasta scores: E(): 1.8e-15, 69.73% id in 76 aa, and to Pseudomonas aeruginosa hypothetical protein pa5289 SWALL:Q9HTR5 (EMBL:AE004941) (86 aa) fasta scores: E(): 1.5e-07, 50.61% id in 81 aa; hypothetical protein 473094 3092500 BPSL0433 Burkholderia pseudomallei K96243 hypothetical protein YP_107058.1 472843 R 272560 CDS YP_107059.1 53718073 3093665 473463..473801 1 NC_006350.1 Similar to Klebsiella pneumoniae nitrogen regulatory protein P-II GlnB SWALL:GLNB_KLEPN (SWALL:P11671) (112 aa) fasta scores: E(): 2.2e-26, 70.53% id in 112 aa, and to Ralstonia solanacearum probable nitrogen regulatory P-II transcription regulator protein rsc0342 or rs06099 SWALL:Q8Y2J3 (EMBL:AL646058) (112 aa) fasta scores: E(): 1.1e-32, 84.82% id in 112 aa. Similar to BPSL1027, 75.000% identity (75.000% ungapped) in 112 aa overlap; nitrogen regulatory protein P-II 1 473801 glnB1 3093665 glnB1 Burkholderia pseudomallei K96243 nitrogen regulatory protein P-II 1 YP_107059.1 473463 D 272560 CDS YP_107060.1 53718074 3094448 473849..475336 1 NC_006350.1 C-terminal region is similar to Bacillus subtilis probable ammonium transporter NrgA SWALL:NRGA_BACSU (SWALL:Q07429) (404 aa) fasta scores: E(): 7.4e-39, 50.61% id in 407 aa. Similar to Xanthomonas axonopodis ammonium transporter xac0206 SWALL:Q9RBJ9 (EMBL:AE011645) (491 aa) fasta scores: E(): 2.1e-60, 52.12% id in 470 aa. CDS is extended at the N-terminus in comparison to orthologues. N-terminus of the CDS contains an alanine rich region. Possible alternative translational start site; ammonium transporter family protein 475336 3094448 BPSL0435 Burkholderia pseudomallei K96243 ammonium transporter family protein YP_107060.1 473849 D 272560 CDS YP_107061.1 53718075 3093803 475712..477040 1 NC_006350.1 Similar to Thiobacillus ferrooxidans glutamate--cysteine ligase GshA SWALL:Q56277 (EMBL:U81808) (436 aa) fasta scores: E(): 3.8e-78, 50.59% id in 419 aa, and to Ralstonia solanacearum hypothetical protein rsc0344 or rs03311 SWALL:Q8Y2J1 (EMBL:AL646058) (431 aa) fasta scores: E(): 2e-125, 71.86% id in 430 aa; glutamate--cysteine ligase 477040 gshA 3093803 gshA Burkholderia pseudomallei K96243 glutamate--cysteine ligase YP_107061.1 475712 D 272560 CDS YP_107062.1 53718076 3093804 477068..478024 1 NC_006350.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 478024 gshB 3093804 gshB Burkholderia pseudomallei K96243 glutathione synthetase YP_107062.1 477068 D 272560 CDS YP_107063.1 53718077 3094449 478197..478670 1 NC_006350.1 Similar to the N-terminal region of Escherichia coli PTS system, mannose-specific IIab component ManX or PtsL or GptB SWALL:PTNA_ECOLI (SWALL:P08186) (322 aa) fasta scores: E(): 0.00046, 32.46% id in 154 aa, and to the full length Ralstonia solanacearum hypothetical protein rsc0346 or rs03313 SWALL:Q8Y2J0 (EMBL:AL646058) (169 aa) fasta scores: E(): 1.2e-23, 63.28% id in 128 aa. CDS is truncated at the N-terminus in comparison to the R. solanacearum protein, but is a similar length to other orthologues; sugar transport PTS system IIA component 478670 3094449 BPSL0438 Burkholderia pseudomallei K96243 sugar transport PTS system IIA component YP_107063.1 478197 D 272560 CDS YP_107064.1 53718078 3094543 478747..479016 1 NC_006350.1 Similar to Escherichia coli Salmonella typhimurium, and Salmonella typhi phosphocarrier protein HPr or PtsH SWALL:PTHP_ECOLI (SWALL:P07006) (85 aa) fasta scores: E(): 3.2e-08, 40.96% id in 83 aa, and to Alcaligenes eutrophus phosphocarrier protein hpr phbH SWALL:PTHP_ALCEU (SWALL:P23537) (89 aa) fasta scores: E(): 2.8e-26, 79.77% id in 89 aa; phosphocarrier protein HPr 479016 ptsH 3094543 ptsH Burkholderia pseudomallei K96243 phosphocarrier protein HPr YP_107064.1 478747 D 272560 CDS YP_107065.1 53718079 3091621 479212..480984 1 NC_006350.1 Similar to Escherichia coli phosphoenolpyruvate-protein phosphotransferase PtsI SWALL:PT1_ECOLI (SWALL:P08839) (575 aa) fasta scores: E(): 1.3e-68, 38.17% id in 571 aa, and to Ralstonia solanacearum probable phosphoenolpyruvate-protein phosphotransferase transmembrane rsc0348 or rs03315 SWALL:Q8Y2I8 (EMBL:AL646058) (586 aa) fasta scores: E(): 1.5e-149, 69.62% id in 586 aa; phosphoenolpyruvate-protein phosphotransferase 480984 3091621 BPSL0440 Burkholderia pseudomallei K96243 phosphoenolpyruvate-protein phosphotransferase YP_107065.1 479212 D 272560 CDS YP_107066.1 53718080 3091622 complement(481272..482030) 1 NC_006350.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 482030 3091622 BPSL0441 Burkholderia pseudomallei K96243 molybdopterin biosynthesis protein MoeB YP_107066.1 481272 R 272560 CDS YP_107067.1 53718081 3092719 complement(482135..483709) 1 NC_006350.1 Similar to Ralstonia solanacearum carboxy-terminal processing protease transmembrane protein rsc0352 or rs03319 SWALL:Q8Y2I4 (EMBL:AL646058) (549 aa) fasta scores: E(): 6.1e-118, 66.91% id in 535 aa. C-terminus is similar to the C-terminal region of Bartonella bacilliformis carboxy-terminal processing protease precursor CtpA SWALL:CTPA_BARBA (SWALL:Q44879) (434 aa) fasta scores: E(): 6.4e-30, 45.18% id in 374 aa; C-terminal processing protease-3 483709 3092719 BPSL0442 Burkholderia pseudomallei K96243 C-terminal processing protease-3 YP_107067.1 482135 R 272560 CDS YP_107068.1 53718082 3093540 complement(483930..484679) 1 NC_006350.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 484679 gpmA 3093540 gpmA Burkholderia pseudomallei K96243 phosphoglyceromutase YP_107068.1 483930 R 272560 CDS YP_107069.1 53718083 3092720 484813..485220 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0354 or rs03321 SWALL:Q8Y2I2 (EMBL:AL646058) (151 aa) fasta scores: E(): 8.6e-30, 60.14% id in 138 aa, and to Xanthomonas axonopodis hypothetical protein xac0220 SWALL:AAM35112 (EMBL:AE011647) (144 aa) fasta scores: E(): 3.2e-14, 40.94% id in 127 aa; hypothetical protein 485220 3092720 BPSL0444 Burkholderia pseudomallei K96243 hypothetical protein YP_107069.1 484813 D 272560 CDS YP_107070.1 53718084 3094582 485232..485492 1 NC_006350.1 Similar to Escherichia coli glutaredoxin 3 GrxC SWALL:GLR3_ECOLI (SWALL:P37687) (82 aa) fasta scores: E(): 1.6e-11, 48.14% id in 81 aa, and to Ralstonia solanacearum probable glutaredoxin 3 rsc0355 or rs03322 SWALL:Q8Y2I1 (EMBL:AL646058) (85 aa) fasta scores: E(): 1.3e-23, 75.29% id in 85 aa; glutaredoxin 3 485492 grxC 3094582 grxC Burkholderia pseudomallei K96243 glutaredoxin 3 YP_107070.1 485232 D 272560 CDS YP_107071.1 53718085 3091642 485609..486088 1 NC_006350.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 486088 secB 3091642 secB Burkholderia pseudomallei K96243 preprotein translocase subunit SecB YP_107071.1 485609 D 272560 CDS YP_107072.1 53718086 3094482 486114..487112 1 NC_006350.1 [NAD(P)+]; catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 487112 gpsA 3094482 gpsA Burkholderia pseudomallei K96243 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_107072.1 486114 D 272560 CDS YP_107073.1 53718087 3092510 487265..487798 1 NC_006350.1 Similar to Chlorobium tepidum histone macro-H2A1-related protein ct2219 SWALL:AAM73435 (EMBL:AE012967) (172 aa) fasta scores: E(): 1.9e-36, 63.25% id in 166 aa, and to Pseudomonas aeruginosa hypothetical protein pa3693 SWALL:Y0J3_PSEAE (SWALL:Q9HXU7) (173 aa) fasta scores: E(): 5.6e-34, 63.75% id in 160 aa; Appr-1-p processing enzyme family protein 487798 3092510 BPSL0448 Burkholderia pseudomallei K96243 Appr-1-p processing enzyme family protein YP_107073.1 487265 D 272560 CDS YP_107074.1 53718088 3092511 complement(488218..488688) 1 NC_006350.1 Similar to Ralstonia solanacearum tRNA/rRNA methyltransferase rsc0358 or rs03326 SWALL:Q8Y2H8 (EMBL:AL646058) (156 aa) fasta scores: E(): 1.2e-49, 78.84% id in 156 aa, and to Neisseria meningitidis RNA methyltransferase, TrmH family nmb0268 SWALL:Q9K199 (EMBL:AE002383) (154 aa) fasta scores: E(): 2.4e-37, 60% id in 155 aa; SpoU rRNA methylase 488688 3092511 BPSL0449 Burkholderia pseudomallei K96243 SpoU rRNA methylase YP_107074.1 488218 R 272560 CDS YP_107075.1 53718089 3093817 complement(488744..489472) 1 NC_006350.1 Similar to Haemophilus influenzae competence protein F Comf SWALL:COMF_HAEIN (SWALL:P31773) (229 aa) fasta scores: E(): 5e-10, 30.31% id in 221 aa, and to Ralstonia solanacearum competence protein F-related protein rsc0359 or rs03327 SWALL:Q8Y2H7 (EMBL:AL646058) (240 aa) fasta scores: E(): 4.8e-28, 47.52% id in 242 aa; hypothetical protein 489472 3093817 BPSL0450 Burkholderia pseudomallei K96243 hypothetical protein YP_107075.1 488744 R 272560 CDS YP_107076.1 53718090 3093818 489595..490560 1 NC_006350.1 Similar to the C-terminal region of Ralstonia solanacearum biotin synthesis protein rsc0360 or rs03328 SWALL:Q8Y2H6 (EMBL:AL646058) (367 aa) fasta scores: E(): 4.4e-51, 50.31% id in 320 aa, and to the full length Xanthomonas campestris biotin synthesis protein xcc0383 SWALL:AAM39702 (EMBL:AE012134) (294 aa) fasta scores: E(): 4.6e-16, 37.84% id in 288 aa. Weakly similar to Escherichia coli biotin synthesis protein BioC SWALL:BIOC_ECOLI (SWALL:P12999) (251 aa) fasta scores: E(): 0.0089, 26.56% id in 271 aa; hypothetical protein 490560 3093818 BPSL0451 Burkholderia pseudomallei K96243 hypothetical protein YP_107076.1 489595 D 272560 CDS YP_107077.1 53718091 3092265 490758..491273 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0361 or rs03329 SWALL:Q8Y2H5 (EMBL:AL646058) (171 aa) fasta scores: E(): 3.2e-21, 45.39% id in 163 aa, and to Brucella melitensis hypothetical membrane spanning protein bmei1783 SWALL:Q8YEU4 (EMBL:AE009611) (179 aa) fasta scores: E(): 0.00072, 25.56% id in 176 aa; hypothetical protein 491273 3092265 BPSL0452 Burkholderia pseudomallei K96243 hypothetical protein YP_107077.1 490758 D 272560 CDS YP_107078.1 53718092 3092266 491323..492900 1 NC_006350.1 No significant database matches to the full length CDS. N-terminal region is similar to Paracoccus denitrificans cytochrome c oxidase polypeptide II precursor CtaC or CtaB or CoiI SWALL:COX2_PARDE (SWALL:P08306) (298 aa) fasta scores: E(): 1.2e-27, 34.84% id in 287 aa, and Pseudomonas aeruginosa cytochrome c oxidase, subunit II pa0105 SWALL:Q9I727 (EMBL:AE004449) (374 aa) fasta scores: E(): 9.4e-60, 48.54% id in 344 aa; cytochrome c oxidase 492900 3092266 BPSL0453 Burkholderia pseudomallei K96243 cytochrome c oxidase YP_107078.1 491323 D 272560 CDS YP_107079.1 53718093 3091625 492944..494551 1 NC_006350.1 Similar to Bradyrhizobium japonicum cytochrome c oxidase polypeptide I CtaD or CoxA SWALL:COX1_BRAJA (SWALL:P31833) (541 aa) fasta scores: E(): 2.6e-121, 55.88% id in 544 aa, and to Ralstonia solanacearum probable cytochrome c oxidase polypeptide I rsc0363 or rs03331 SWALL:Q8Y2H3 (EMBL:AL646058) (534 aa) fasta scores: E(): 3e-186, 84.86% id in 535 aa. Similar to BPSS0086, 78.719% identity (79.317% ungapped) in 531 aa overlap; cytochrome c oxidase polypeptide I 494551 ctaD 3091625 ctaD Burkholderia pseudomallei K96243 cytochrome c oxidase polypeptide I YP_107079.1 492944 D 272560 CDS YP_107080.1 53718094 3092603 494620..494760 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0364 or rs03332 SWALL:Q8Y2H2 (EMBL:AL646058) (43 aa) fasta scores: E(): 0.86, 39.39% id in 33 aa; hypothetical protein 494760 3092603 BPSL0455 Burkholderia pseudomallei K96243 hypothetical protein YP_107080.1 494620 D 272560 CDS YP_107081.1 53718095 3092604 494782..495387 1 NC_006350.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 495387 3092604 BPSL0456 Burkholderia pseudomallei K96243 cytochrome C oxidase assembly protein YP_107081.1 494782 D 272560 CDS YP_107082.1 53718096 3093867 495407..495607 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0366 or rs03334 SWALL:Q8Y2H0 (EMBL:AL646058) (70 aa) fasta scores: E(): 4.5e-12, 58.73% id in 63 aa; hypothetical protein 495607 3093867 BPSL0457 Burkholderia pseudomallei K96243 hypothetical protein YP_107082.1 495407 D 272560 CDS YP_107083.1 53718097 3093868 495742..496599 1 NC_006350.1 Similar to Salmo salar cytochrome c oxidase polypeptide III CoxIII SWALL:COX3_SALSA (SWALL:Q36860) (261 aa) fasta scores: E(): 2.4e-28, 42.02% id in 276 aa, and to Ralstonia solanacearum probable cytochrome c oxidase subunit III transmembrane protein rsc0367 or rs03335 SWALL:Q8Y2G9 (EMBL:AL646058) (286 aa) fasta scores: E(): 1.4e-87, 72.04% id in 279 aa; cytochrome c oxidase subunit III 496599 3093868 BPSL0458 Burkholderia pseudomallei K96243 cytochrome c oxidase subunit III YP_107083.1 495742 D 272560 CDS YP_107084.1 53718098 3092337 complement(496759..496968) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0368 or rs03336 SWALL:Q8Y2G8 (EMBL:AL646058) (69 aa) fasta scores: E(): 9.7e-14, 63.76% id in 69 aa, and to Xanthomonas campestris hypothetical protein Xcc3828 SWALL:Q8P483 (EMBL:AE012503) (72 aa) fasta scores: E(): 2.5e-05, 35.71% id in 70 aa; hypothetical protein 496968 3092337 BPSL0458a Burkholderia pseudomallei K96243 hypothetical protein YP_107084.1 496759 R 272560 CDS YP_107085.1 53718099 3092338 497056..497769 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane cytochrome oxidase complex biogenesis factor transmembrane protein rsc0369 or rs03337 SWALL:Q8Y2G7 (EMBL:AL646058) (256 aa) fasta scores: E(): 6.5e-33, 43.62% id in 243 aa, and to Rhizobium loti hypothetical protein mlr7500 SWALL:Q985W4 (EMBL:AP003011) (251 aa) fasta scores: E(): 6.8e-11, 29.67% id in 246 aa. Possible alternative translational start site; hypothetical protein 497769 3092338 BPSL0459 Burkholderia pseudomallei K96243 hypothetical protein YP_107085.1 497056 D 272560 CDS YP_107086.1 53718100 3093165 497831..498475 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0370 or rs03338 SWALL:Q8Y2G6 (EMBL:AL646058) (215 aa) fasta scores: E(): 6.2e-38, 52.7% id in 203 aa, and to Xanthomonas axonopodis hypothetical protein xac3881 SWALL:AAM38723 (EMBL:AE012037) (191 aa) fasta scores: E(): 6.1e-06, 26.56% id in 192 aa; hypothetical protein 498475 3093165 BPSL0460 Burkholderia pseudomallei K96243 hypothetical protein YP_107086.1 497831 D 272560 CDS YP_107087.1 53718101 3093166 498579..499628 1 NC_006350.1 Similar to Ralstonia solanacearum heme O oxygenase CtaA SWALL:Q8Y2G5 (EMBL:AL646058) (363 aa) fasta scores: E(): 4.5e-83, 63.63% id in 330 aa, and to Pseudomonas aeruginosa hypothetical protein pa0112 SWALL:Q9I720 (EMBL:AE004449) (357 aa) fasta scores: E(): 1.1e-50, 45.59% id in 329 aa; cytochrome oxidase assembly protein 499628 3093166 BPSL0461 Burkholderia pseudomallei K96243 cytochrome oxidase assembly protein YP_107087.1 498579 D 272560 CDS YP_107088.1 53718102 3092906 499641..500543 1 NC_006350.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 500543 3092906 BPSL0462 Burkholderia pseudomallei K96243 protoheme IX farnesyltransferase YP_107088.1 499641 D 272560 CDS YP_107089.1 53718103 3092907 500563..501180 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein rsc0373 or rs03341 SWALL:Q8Y2G3 (EMBL:AL646058) (200 aa) fasta scores: E(): 5.3e-49, 64.76% id in 193 aa> Internal region is similar to Homo sapiens mitochondrial, cytochrome c oxidase subunit II processing protein SCO2 SWALL:SCO2_HUMAN (SWALL:O43819) (266 aa) fasta scores: E(): 8e-17, 35.67% id in 171 aa; lipoprotein 501180 3092907 BPSL0463 Burkholderia pseudomallei K96243 lipoprotein YP_107089.1 500563 D 272560 CDS YP_107090.1 53718104 3094571 complement(501260..501553) 1 NC_006350.1 Similar to Streptomyces coelicolor hypothetical protein sco6725 or SC5f2A.08c SWALL:Q9X7N1 (EMBL:AL049587) (98 aa) fasta scores: E(): 2.1e-13, 50% id in 90 aa, and to Rhizobium loti hypothetical protein mlr3009 SWALL:Q98H68 (EMBL:AP003000) (101 aa) fasta scores: E(): 1.8e-10, 42.9% id in 91 aa; hypothetical protein 501553 3094571 BPSL0464 Burkholderia pseudomallei K96243 hypothetical protein YP_107090.1 501260 R 272560 CDS YP_107091.1 53718105 3094572 501740..503380 1 NC_006350.1 Similar to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc2799 or rs05622 SWALL:Q8XVN1 (EMBL:AL646071) (515 aa) fasta scores: E(): 1.7e-104, 64.32% id in 513 aa. C-terminus is similar to the C-terminal region of Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 3.9e-56, 61.65% id in 326 aa. Simlar to BPSS1218, 54.386% identity (54.492% ungapped) in 513 aa overlap; methyl-accepting chemotaxis protein 503380 3094572 BPSL0465 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_107091.1 501740 D 272560 CDS YP_107092.1 53718106 3091607 503530..504348 1 NC_006350.1 Similar to Pasteurella haemolytica outer membrane lipoprotein 3 precursor PlpC SWALL:PLPC_PASHA (SWALL:Q08870) (263 aa) fasta scores: E(): 5.1e-41, 49.41% id in 257 aa, and to the C-terminal region of Ralstonia solanacearum outermembrane signal peptide protein rsc3386 or rs06100 SWALL:Q8XU08 (EMBL:AL646075) (529 aa) fasta scores: E(): 5.9e-63, 66.79% id in 268 aa. Similar to BPSS0266, 63.806% identity (64.528% ungapped) in 268 aa overlap and to BPSL2501, 60.294% identity (62.121% ungapped) in 272 aa overlapNote, although CDS is similar to characterized and predicted lipoproteins, it does not contain residues required for lipoprotein processing; hypothetical protein 504348 3091607 BPSL0466 Burkholderia pseudomallei K96243 hypothetical protein YP_107092.1 503530 D 272560 CDS YP_107093.1 53718107 3091608 504599..505570 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc1740 or rs02928 SWALL:Q8XYL8 (EMBL:AL646066) (329 aa) fasta scores: E(): 1.2e-77, 74.77% id in 329 aa, and to Pseudomonas aeruginosa hypothetical protein pa3836 SWALL:Q9HXG8 (EMBL:AE004801) (325 aa) fasta scores: E(): 2.9e-70, 67.83% id in 314 aa; hypothetical protein 505570 3091608 BPSL0467 Burkholderia pseudomallei K96243 hypothetical protein YP_107093.1 504599 D 272560 CDS YP_107094.1 53718108 3093750 505879..506775 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane ABC transporter protein rsc1739 or rs02927 SWALL:Q8XYL9 (EMBL:AL646066) (303 aa) fasta scores: E(): 3.9e-90, 83.83% id in 297 aa. Weakly similar to the C-terminal region of Escherichia coli ribose transport system permease RbsC SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 5.1e-08, 23.81% id in 294 aa; branched-chain amino acid transport system permease 506775 3093750 BPSL0468 Burkholderia pseudomallei K96243 branched-chain amino acid transport system permease YP_107094.1 505879 D 272560 CDS YP_107095.1 53718109 3093751 506776..507570 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1738 or rs02926 SWALL:Q8XYM0 (EMBL:AL646066) (264 aa) fasta scores: E(): 1.3e-71, 84.47% id in 264 aa, and to the N-terminal region Escherichia coli sulfate transport ATP-binding protein CysA SWALL:CYSA_ECOLI (SWALL:P16676) (365 aa) fasta scores: E(): 2.8e-12, 33.79% id in 219 aa; ABC transport system ATP-binding protein 507570 3093751 BPSL0469 Burkholderia pseudomallei K96243 ABC transport system ATP-binding protein YP_107095.1 506776 D 272560 CDS YP_107096.1 53718110 3092796 508420..509895 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0799 or rs01908 SWALL:Q8XRN2 (EMBL:AL646080) (523 aa) fasta scores: E(): 3e-53, 46.44% id in 521 aa, and to Xanthomonas axonopodis hypothetical protein xac1198 SWALL:Q8PN75 (EMBL:AE011749) (472 aa) fasta scores: E(): 9.2e-33, 36.67% id in 499 aa; hypothetical protein 509895 3092796 BPSL0471 Burkholderia pseudomallei K96243 hypothetical protein YP_107096.1 508420 D 272560 CDS YP_107097.1 53718111 3092552 509901..513119 1 NC_006350.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 513119 dnaE2 3092552 dnaE2 Burkholderia pseudomallei K96243 error-prone DNA polymerase YP_107097.1 509901 D 272560 CDS YP_107098.1 53718112 3092553 complement(513457..514278) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5220 SWALL:Q9HTX0 (EMBL:AE004935) (273 aa) fasta scores: E(): 8.4e-70, 65.68% id in 271 aa; hypothetical protein 514278 3092553 BPSL0473 Burkholderia pseudomallei K96243 hypothetical protein YP_107098.1 513457 R 272560 CDS YP_107099.1 53718113 3093352 complement(514322..515515) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5219 SWALL:Q9HTX1 (EMBL:AE004935) (397 aa) fasta scores: E(): 2.9e-62, 48.59% id in 391 aa. Weakly similar to Streptomyces lividans chloramphenicol resistance protein CmlR SWALL:CMLR_STRLI (SWALL:P31141) (392 aa) fasta scores: E(): 1.6e-09, 26.79% id in 377 aa; transporter protein 515515 3093352 BPSL0474 Burkholderia pseudomallei K96243 transporter protein YP_107099.1 514322 R 272560 CDS YP_107100.1 53718114 3093353 complement(515717..516748) 1 NC_006350.1 Similar to Pseudomonas syringae hypothetical protein SWALL:Q52580 (EMBL:U27310) (327 aa) fasta scores: E(): 6.8e-20, 32.71% id in 321 aa. C-terminus is weakly similar to the C-terminal region of Synechocystis sp. fatty acid desaturase DesA SWALL:DESA_SYNY3 (SWALL:P20388) (351 aa) fasta scores: E(): 8.7e-07, 28.91% id in 249 aa; fatty acid desaturase 516748 3093353 BPSL0475 Burkholderia pseudomallei K96243 fatty acid desaturase YP_107100.1 515717 R 272560 CDS YP_107101.1 53718115 3093251 complement(516794..518146) 1 NC_006350.1 Similar to Haemophilus influenzae diaminobutyrate--2-oxoglutarate aminotransferase Dat SWALL:DAT_HAEIN (SWALL:P44951) (454 aa) fasta scores: E(): 2.2e-76, 49.51% id in 412 aa, and to Rhizobium meliloti diaminobutyrate--2-oxoglutarate aminotransferase RhbA SWALL:RHBA_RHIME (SWALL:Q9Z3R2) (470 aa) fasta scores: E(): 4.9e-91, 54.4% id in 443 aa. Similar to BPSS1635, 56.019% identity (56.674% ungapped) in 432 aa overlap; diaminobutyrate--2-oxoglutarate aminotransferase 518146 3093251 BPSL0476 Burkholderia pseudomallei K96243 diaminobutyrate--2-oxoglutarate aminotransferase YP_107101.1 516794 R 272560 CDS YP_107102.1 53718116 3093252 complement(518191..518724) 1 NC_006350.1 hypothetical protein 518724 3093252 BPSL0477 Burkholderia pseudomallei K96243 hypothetical protein YP_107102.1 518191 R 272560 CDS YP_107103.1 53718117 3091811 complement(518799..519890) 1 NC_006350.1 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Rhizobium meliloti ABC transporter permease rb0870 or smb21204 SWALL:Q92V47 (EMBL:AL603645) (370 aa) fasta scores: E(): 7.5e-09, 28.5% id in 228 aa, and Brucella melitensis daunorubicin resistance transmembrane protein bmeii0801 SWALL:Q8YBT5 (EMBL:AE009714) (379 aa) fasta scores: E(): 2.9e-07, 24.59% id in 305 aa; hypothetical protein 519890 3091811 BPSL0478 Burkholderia pseudomallei K96243 hypothetical protein YP_107103.1 518799 R 272560 CDS YP_107104.1 53718118 3091812 complement(519883..520839) 1 NC_006350.1 Similar to Streptomyces coelicolor ABC transporter ATP-binding subunit sco2305 or scc30.13 SWALL:Q9L008 (EMBL:AL352972) (308 aa) fasta scores: E(): 5.7e-09, 30.59% id in 317 aa, and to the N-terminal region of Rhodobacter capsulatus molybdenum transport ATP-binding protein ModC or MolD SWALL:MODC_RHOCA (SWALL:Q08381) (363 aa) fasta scores: E(): 1.8e-08, 28.98% id in 314 aa; ABC transport system ATP-binding protein 520839 3091812 BPSL0479 Burkholderia pseudomallei K96243 ABC transport system ATP-binding protein YP_107104.1 519883 R 272560 CDS YP_107105.1 53718119 3092736 complement(520932..521999) 1 NC_006350.1 Similar to Pseudomonas syringae syringomycin biosynthesis regulatory protein SyrP SWALL:P97053 (EMBL:U88574) (353 aa) fasta scores: E(): 1.9e-25, 35.54% id in 332 aa, and to Streptomyces verticillus SyrP-like protein SWALL:Q9FB16 (EMBL:AF210249) (339 aa) fasta scores: E(): 3.1e-32, 37.5% id in 320 aa; hypothetical protein 521999 3092736 BPSL0480 Burkholderia pseudomallei K96243 hypothetical protein YP_107105.1 520932 R 272560 CDS YP_107106.1 53718120 3092737 complement(521996..522661) 1 NC_006350.1 Similar to the N-terminal regions of Deinococcus radiodurans methyltransferase dr0026 SWALL:Q9RYC4 (EMBL:AE001866) (269 aa) fasta scores: E(): 1.1e-08, 36.36% id in 209 aa, and Amycolatopsis mediterranei methyltransferase SWALL:O52570 (EMBL:AF040570) (272 aa) fasta scores: E(): 1.5e-05, 30.8% id in 224 aa; hypothetical protein 522661 3092737 BPSL0481 Burkholderia pseudomallei K96243 hypothetical protein YP_107106.1 521996 R 272560 CDS YP_107107.1 53718121 3092808 complement(522701..523852) 1 NC_006350.1 Similar to Corynebacterium glutamicum 2-methylcitrate synthase 2 PrpC2 or cgl0659 SWALL:BAB98052 (EMBL:AF434799) (383 aa) fasta scores: E(): 6.2e-07, 26.81% id in 358 aa, and to Antarctic bacterium DS2-3R citrate synthase GltA or CisY SWALL:CISY_ABDS2 (SWALL:O34002) (379 aa) fasta scores: E(): 0.004, 23.59% id in 356 aa; hypothetical protein 523852 3092808 BPSL0482 Burkholderia pseudomallei K96243 hypothetical protein YP_107107.1 522701 R 272560 CDS YP_107108.1 53718122 3092809 complement(523854..525725) 1 NC_006350.1 Similar to Mycobacterium tuberculosis acyl-CoA dehydrogenase rv0244c or mtv034.10c or mt0258 SWALL:O53666 (EMBL:AL021929) (611 aa) fasta scores: E(): 2.2e-44, 32.47% id in 622 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa1284 SWALL:Q9I460 (EMBL:AE004558) (606 aa) fasta scores: E(): 2.3e-43, 33.49% id in 612 aa; hypothetical protein 525725 3092809 BPSL0483 Burkholderia pseudomallei K96243 hypothetical protein YP_107108.1 523854 R 272560 CDS YP_107109.1 53718123 3093491 complement(525722..526762) 1 NC_006350.1 Weakly similar to Escherichia coli 3-oxoacyl-[acyl-carrier-protein] synthase III FabH SWALL:FABH_ECOLI (SWALL:P24249) (317 aa) fasta scores: E(): 1.2, 24.28% id in 313 aa, and to Streptomyces coelicolor acyl carrier protein synthase sco3246 or SCE29.15c SWALL:Q9Z4Y5 (EMBL:AL035707) (330 aa) fasta scores: E(): 2.4e-06, 28.42% id in 299 aa; hypothetical protein 526762 3093491 BPSL0484 Burkholderia pseudomallei K96243 hypothetical protein YP_107109.1 525722 R 272560 CDS YP_107110.1 53718124 3093492 complement(526780..528348) 1 NC_006350.1 Similar to Agrobacterium tumefaciens long-chain fatty acid-CoA ligase fadd or atu1672 or AGR_C_3078 SWALL:Q8UET3 (EMBL:AE009124) (510 aa) fasta scores: E(): 5e-60, 39.18% id in 513 aa, and to the N-terminal region of Pseudomonas syringae syringomycin biosynthesis enzyme 1 SyrB1 SWALL:Q52400 (EMBL:U25130) (614 aa) fasta scores: E(): 9.5e-30, 30.71% id in 521 aa. Simlar to the C-terminal region of BPSS1568, 50.958% identity (53.737% ungapped) in 522 aa overlap; AMP-binding enzyme 528348 3093492 BPSL0485 Burkholderia pseudomallei K96243 AMP-binding enzyme YP_107110.1 526780 R 272560 CDS YP_107111.1 53718125 3092487 complement(528356..529552) 1 NC_006350.1 Similar to Pseudomonas aeruginosa diaminopimelate decarboxylase LysA SWALL:DCDA_PSEAE (SWALL:P19572) (415 aa) fasta scores: E(): 5e-06, 27.2% id in 386 aa, and to Xanthomonas axonopodis diaminopimelate decarboxylase xac3181 SWALL:Q8PHR8 (EMBL:AE011963) (398 aa) fasta scores: E(): 1.7e-09, 27.34% id in 395 aa; pyridoxal-dependent decarboxylase 529552 3092487 BPSL0486 Burkholderia pseudomallei K96243 pyridoxal-dependent decarboxylase YP_107111.1 528356 R 272560 CDS YP_107112.1 53718126 3092488 complement(529542..530540) 1 NC_006350.1 Poor database matches. Similar to Erwinia chrysanthemi hypothetical protein VfmA SWALL:Q8RKD3 (EMBL:AJ438188) (275 aa) fasta scores: E(): 0.00013, 22.61% id in 252 aa; hypothetical protein 530540 3092488 BPSL0487 Burkholderia pseudomallei K96243 hypothetical protein YP_107112.1 529542 R 272560 CDS YP_107113.1 53718127 3093167 complement(530545..531486) 1 NC_006350.1 Weakly similar to Streptomyces coelicolor membrane protein sco5299 or SC6G9.34 SWALL:Q9XAE8 (EMBL:AL079356) (312 aa) fasta scores: E(): 7e-07, 24.83% id in 302 aa, and to Synechocystis sp. hypothetical protein SLL0265 SWALL:P74402 (EMBL:D90914) (301 aa) fasta scores: E(): 0.29, 22.55% id in 266 aa; hypothetical protein 531486 3093167 BPSL0488 Burkholderia pseudomallei K96243 hypothetical protein YP_107113.1 530545 R 272560 CDS YP_107114.1 53718128 3093168 complement(531547..532113) 1 NC_006350.1 hypothetical protein 532113 3093168 BPSL0489 Burkholderia pseudomallei K96243 hypothetical protein YP_107114.1 531547 R 272560 CDS YP_107115.1 53718129 3092641 complement(532110..532997) 1 NC_006350.1 hypothetical protein 532997 3092641 BPSL0490 Burkholderia pseudomallei K96243 hypothetical protein YP_107115.1 532110 R 272560 CDS YP_107116.1 53718130 3092642 complement(533030..533278) 1 NC_006350.1 Similar to Cylindrotheca sp. acyl carrier protein AcpP or Acl1 or Acp SWALL:ACP_CYLSN (SWALL:P27060) (80 aa) fasta scores: E(): 4.5, 36.36% id in 66 aa; acyl carrier protein 533278 3092642 BPSL0491 Burkholderia pseudomallei K96243 acyl carrier protein YP_107116.1 533030 R 272560 CDS YP_107117.1 53718131 3093091 complement(533334..534527) 1 NC_006350.1 Poor database matches. N-terminus is weakly similar to the C-terminal region of Streptomyces coelicolor lipase sco3219 or SCE8.12c SWALL:Q9Z360 (EMBL:AL035654) (391 aa) fasta scores: E(): 1.7, 27.92% id in 265 aa; hypothetical protein 534527 3093091 BPSL0492 Burkholderia pseudomallei K96243 hypothetical protein YP_107117.1 533334 R 272560 CDS YP_107118.1 53718132 3093092 complement(534524..536290) 1 NC_006350.1 Similar to Burkholderia cepacia amino acid activating protein required for lipopeptide antibiotic production AfcA SWALL:Q9ZGQ2 (EMBL:AF076477) (587 aa) fasta scores: E(): 6.1e-106, 50.68% id in 586 aa, and to the N-terminal region of Myxococcus xanthus saframycin Mx1 synthetase B SafB SWALL:Q50857 (EMBL:U24657) (1770 aa) fasta scores: E(): 2.4e-41, 32.09% id in 567 aa; AMP-binding enzyme 536290 3093092 BPSL0493 Burkholderia pseudomallei K96243 AMP-binding enzyme YP_107118.1 534524 R 272560 CDS YP_107119.1 53718133 3094239 536724..537647 1 NC_006350.1 Similar to Bacillus subtilis als operon regulatory protein AlsR SWALL:ALSR_BACSU (SWALL:Q04778) (302 aa) fasta scores: E(): 1.3e-26, 33.33% id in 288 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5218 SWALL:Q9HTX2 (EMBL:AE004934) (304 aa) fasta scores: E(): 7.6e-45, 48.09% id in 289 aa; LysR family transcriptional regulator 537647 3094239 BPSL0494 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107119.1 536724 D 272560 CDS YP_107120.1 53718134 3094240 538360..539124 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3757 SWALL:Q9HXN8 (EMBL:AE004794) (247 aa) fasta scores: E(): 3.5e-49, 58.65% id in 237 aa, and to Xanthomonas axonopodis GnrR family transcriptional regulator xac0711 SWALL:AAM35600 (EMBL:AE011701) (255 aa) fasta scores: E(): 1e-41, 50.6% id in 247 aa. Similar to BPSL0891, 62.500% identity (62.500% ungapped) in 240 aa overlap; GntR family transcriptional regulator 539124 3094240 BPSL0495 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_107120.1 538360 D 272560 CDS YP_107121.1 53718135 3093684 539223..540326 1 NC_006350.1 Similar to Escherichia coli N-acetylglucosamine-6-phosphate deacetylase NagA SWALL:NAGA_ECOLI (SWALL:P15300) (382 aa) fasta scores: E(): 5.2e-23, 34.12% id in 337 aa, and to Pseudomonas aeruginosa probable N-acetylglucosamine-6-phosphate deacetylase pa3758 SWALL:Q9HXN7 (EMBL:AE004794) (363 aa) fasta scores: E(): 6.3e-93, 68.14% id in 361 aa; N-acetylglucosamine-6-phosphate deacetylase 540326 3093684 BPSL0496 Burkholderia pseudomallei K96243 N-acetylglucosamine-6-phosphate deacetylase YP_107121.1 539223 D 272560 CDS YP_107122.1 53718136 3093685 540310..541326 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable aminotransferase pa3759 SWALL:Q9HXN6 (EMBL:AE004794) (340 aa) fasta scores: E(): 1e-70, 65.08% id in 338 aa, and to the C-terminal regions of many glucosamine--fructose-6-phosphate aminotransferases , including of Escherichia coli glucosamine--fructose-6-phosphate aminotransferase [isomerizing] GlmS SWALL:GLMS_ECOLI (SWALL:P17169) (608 aa) fasta scores: E(): 1.8e-09, 28.9% id in 339 aa; phosphosugar-binding protein 541326 3093685 BPSL0497 Burkholderia pseudomallei K96243 phosphosugar-binding protein YP_107122.1 540310 D 272560 CDS YP_107123.1 53718137 3093340 541360..543978 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable phosphotransferase pa3760 SWALL:Q9HXN5 (EMBL:AE004794) (842 aa) fasta scores: E(): 8e-102, 49.53% id in 860 aa. C-terminus is similar to the C-terminal region of Rhodobacter capsulatus multiphosphoryl transfer protein frub(hi) SWALL:PTF1_RHOCA (SWALL:P23388) (827 aa) fasta scores: E(): 2.7e-78, 40.73% id in 739 aa; multiphosphoryl transfer protein 543978 3093340 BPSL0498 Burkholderia pseudomallei K96243 multiphosphoryl transfer protein YP_107123.1 541360 D 272560 CDS YP_107124.1 53718138 3093341 544079..545851 1 NC_006350.1 N-terminus is similar to the N-terminal region of Escherichia coli PTS system, N-acetylglucosamine-specific IIabc component NagE or PstN SWALL:PTAA_ECOLI (SWALL:P09323) (648 aa) fasta scores: E(): 1.2e-88, 52.51% id in 516 aa. Full length CDS is similar to Pseudomonas aeruginosa probable phosphotransferase system protein pa3761 SWALL:Q9HXN4 (EMBL:AE004794) (570 aa) fasta scores: E(): 1.2e-85, 56.15% id in 577 aa; phosphotransferase system, IIBC component 545851 3093341 BPSL0499 Burkholderia pseudomallei K96243 phosphotransferase system, IIBC component YP_107124.1 544079 D 272560 CDS YP_107125.1 53718139 3094367 complement(546569..549070) 1 NC_006350.1 Similar to Serratia marcescens chitobiase precursor Chb SWALL:CHB_SERMA (SWALL:Q54468) (885 aa) fasta scores: E(): 2e-118, 46.94% id in 801 aa, and to Burkholderia cepacia chitinase Bcc1 SWALL:Q9F1K5 (EMBL:AB053088) (826 aa) fasta scores: E(): 0, 85.8% id in 831 aa. CDS is truncated at the C-terminus in comparison to orthologues; chitobiase 549070 3094367 BPSL0500 Burkholderia pseudomallei K96243 chitobiase YP_107125.1 546569 R 272560 CDS YP_107126.1 53718140 3094368 complement(550382..550480) 1 NC_006350.1 Similar to Bordetella pertussis exported protein SWALL:Q7W092 (EMBL:BX640411) (41 aa) fasta scores: E(): 1.1e-07, 71.42% id in 28 aa, and to Shewanella oneidensis conserved hypothetical protein SWALL:Q8EC60 (EMBL:AE015765) (38 aa) fasta scores: E(): 2.4e-07, 61.29% id in 31 aa; hypothetical protein 550480 3094368 BPSL0500A Burkholderia pseudomallei K96243 hypothetical protein YP_107126.1 550382 R 272560 CDS YP_107127.1 53718141 3093122 complement(550571..551707) 1 NC_006350.1 Similar to Escherichia coli cytochrome d ubiquinol oxidase subunit II CydB or Cyd-2 SWALL:CYDB_ECOLI (SWALL:P11027) (379 aa) fasta scores: E(): 1.6e-77, 52.91% id in 378 aa, and to Caulobacter crescentus cytochrome d ubiquinol oxidase subunit II cc0763 SWALL:Q9AA43 (EMBL:AE005752) (383 aa) fasta scores: E(): 1.1e-84, 59.57% id in 376 aa; cytochrome d ubiquinol oxidase subunit II 551707 cydB 3093122 cydB Burkholderia pseudomallei K96243 cytochrome d ubiquinol oxidase subunit II YP_107127.1 550571 R 272560 CDS YP_107128.1 53718142 3091672 complement(551745..553340) 1 NC_006350.1 Similar to Escherichia coli cytochrome d ubiquinol oxidase subunit I CydA or Cyd-1 SWALL:CYDA_ECOLI (SWALL:P11026) (522 aa) fasta scores: E(): 6e-137, 64.87% id in 521 aa, and to Azotobacter vinelandii cytochrome d ubiquinol oxidase subunit I CydA SWALL:CYDA_AZOVI (SWALL:Q09049) (537 aa) fasta scores: E(): 6.2e-143, 68.66% id in 517 aa; cytochrome d ubiquinol oxidase subunit I 553340 cydA 3091672 cydA Burkholderia pseudomallei K96243 cytochrome d ubiquinol oxidase subunit I YP_107128.1 551745 R 272560 CDS YP_107129.1 53718143 3092140 complement(553330..553614) 1 NC_006350.1 hypothetical protein 553614 3092140 BPSL0503 Burkholderia pseudomallei K96243 hypothetical protein YP_107129.1 553330 R 272560 CDS YP_107130.1 53718144 3094670 complement(554070..555005) 1 NC_006350.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 555005 rpoH 3094670 rpoH Burkholderia pseudomallei K96243 RNA polymerase factor sigma-32 YP_107130.1 554070 R 272560 CDS YP_107131.1 53718145 3092141 555370..555939 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsp1201 or rs03145 SWALL:Q8XQM1 (EMBL:AL646083) (187 aa) fasta scores: E(): 1.3e-20, 38.25% id in 183 aa; hypothetical protein 555939 3092141 BPSL0505 Burkholderia pseudomallei K96243 hypothetical protein YP_107131.1 555370 D 272560 CDS YP_107132.1 53718146 3092727 555960..556367 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc3100 or rs00553 SWALL:Q8XUT5 (EMBL:AL646073) (131 aa) fasta scores: E(): 0.88, 29.82% id in 114 aa; hypothetical protein 556367 3092727 BPSL0506 Burkholderia pseudomallei K96243 hypothetical protein YP_107132.1 555960 D 272560 CDS YP_107133.1 53718147 3092728 complement(556694..558334) 1 NC_006350.1 N-terminus is similar to the N-terminal region of Saccharomyces cerevisiae 2-isopropylmalate synthase LEU4 SWALL:LEU1_YEAST (SWALL:P06208) (619 aa) fasta scores: E(): 1.8e-95, 56.1% id in 442 aa. Similar to Ralstonia solanacearum 2-isopropylmalate synthase 2 rsp0322 or rs05445 SWALL:Q8XSZ5 (EMBL:AL646078) (576 aa) fasta scores: E(): 8.2e-119, 58.87% id in 552 aa; 2-isopropylmalate synthase 558334 3092728 BPSL0507 Burkholderia pseudomallei K96243 2-isopropylmalate synthase YP_107133.1 556694 R 272560 CDS YP_107134.1 53718148 3092599 complement(558769..559617) 1 NC_006350.1 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Anabaena sp. hypothetical protein ALL0878 SWALL:Q8YYH2 (EMBL:AP003583) (272 aa) fasta scores: E(): 2.4e-12, 30.18% id in 222 aa, and to Streptomyces coelicolor acetyltransferase sco7150 or sc9a4.12C SWALL:Q9FBU1 (EMBL:AL391072) (278 aa) fasta scores: E(): 2.4e-06, 30.83% id in 240 aa. Similar to BPSS1168, 69.888% identity (69.888% ungapped) in 269 aa overlap; acetyltransferase (GNAT) family protein 559617 3092599 BPSL0508 Burkholderia pseudomallei K96243 acetyltransferase (GNAT) family protein YP_107134.1 558769 R 272560 CDS YP_107135.1 53718149 3092600 complement(560231..561211) 1 NC_006350.1 Similar to Yersinia pestis glycosyl transferase ypo2522 SWALL:Q8ZDN8 (EMBL:AJ414152) (319 aa) fasta scores: E(): 5.8e-38, 43.33% id in 300 aa, and weakly similar Bradyrhizobium japonicum anthranilate phosphoribosyltransferase TrpD SWALL:TRPD_BRAJA (SWALL:P94326) (337 aa) fasta scores: E(): 4.7e-06, 24.41% id in 299 aa; glycosyl transferase 561211 3092600 BPSL0509 Burkholderia pseudomallei K96243 glycosyl transferase YP_107135.1 560231 R 272560 CDS YP_107136.1 53718150 3094127 complement(561208..564063) 1 NC_006350.1 Similar to Klebsiella pneumoniae nitrate reductase NasA SWALL:NASA_KLEPN (SWALL:Q06457) (866 aa) fasta scores: E(): 9.5e-90, 40.97% id in 947 aa, and to Xanthomonas campestris nitrate reductase xcc2009 SWALL:AAM41298 (EMBL:AE012305) (912 aa) fasta scores: E(): 6.1e-181, 56.06% id in 931 aa; nitrate reductase 564063 3094127 BPSL0510 Burkholderia pseudomallei K96243 nitrate reductase YP_107136.1 561208 R 272560 CDS YP_107137.1 53718151 3094128 complement(564060..564455) 1 NC_006350.1 Similar to Bacillus subtilis assimilatory nitrite reductase [NAD(P)H] small subunit NasE or NirD SWALL:NASE_BACSU (SWALL:P42436) (106 aa) fasta scores: E(): 9.4e-09, 34.69% id in 98 aa, and to Xanthomonas campestris nitrite assimilation small subunit xcc2008 SWALL:AAM41297 (EMBL:AE012305) (119 aa) fasta scores: E(): 7.5e-22, 57.75% id in 116 aa; nitrite reductase small subunit 564455 3094128 BPSL0511 Burkholderia pseudomallei K96243 nitrite reductase small subunit YP_107137.1 564060 R 272560 CDS YP_107138.1 53718152 3092067 complement(564531..566975) 1 NC_006350.1 Similar to the N-terminal region of Klebsiella pneumoniae nitrite reductase [NAD(P)H] NasB SWALL:NIRB_KLEPN (SWALL:Q06458) (957 aa) fasta scores: E(): 2.3e-90, 36.3% id in 785 aa, and to the full length Pseudomonas aeruginosa assimilatory nitrite reductase large subunit pa1781 SWALL:Q9I2W1 (EMBL:AE004603) (816 aa) fasta scores: E(): 0, 74.11% id in 792 aa; nitrite reductase 566975 3092067 BPSL0512 Burkholderia pseudomallei K96243 nitrite reductase YP_107138.1 564531 R 272560 CDS YP_107139.1 53718153 3092068 567360..568004 1 NC_006350.1 Similar to Homo sapiens maleylacetoacetate isomerase GSTZ1 or MAAI SWALL:MAAI_HUMAN (SWALL:O43708) (216 aa) fasta scores: E(): 2.5e-31, 47.39% id in 211 aa, and to Ralstonia solanacearum probable maleylacetoacetate isomerase rsc0384 or rs03352 SWALL:Q8Y2F2 (EMBL:AL646059) (216 aa) fasta scores: E(): 3.5e-54, 63.38% id in 213 aa; maleylacetoacetate isomerase 568004 3092068 BPSL0513 Burkholderia pseudomallei K96243 maleylacetoacetate isomerase YP_107139.1 567360 D 272560 CDS YP_107140.1 53718154 3092707 complement(568161..569480) 1 NC_006350.1 Similar to the C-terminal region of Escherichia coli cell division protein FtsY SWALL:FTSY_ECOLI (SWALL:P10121) (497 aa) fasta scores: E(): 6.4e-41, 44% id in 425 aa, and to the full length Neisseria meningitidis cell division protein FtsY homolog nma0291 SWALL:FTSY_NEIMA (SWALL:P57010) (421 aa) fasta scores: E(): 4.2e-50, 50.33% id in 443 aa; cell division protein 569480 3092707 BPSL0514 Burkholderia pseudomallei K96243 cell division protein YP_107140.1 568161 R 272560 CDS YP_107141.1 53718155 3092708 569732..570358 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0389 or rs03357 SWALL:Q8Y2E7 (EMBL:AL646059) (215 aa) fasta scores: E(): 3.1e-31, 52.31% id in 216 aa, and to Xanthomonas campestris hypothetical protein xcc2392 SWALL:AAM41670 (EMBL:AE012348) (207 aa) fasta scores: E(): 6.3e-24, 47.57% id in 206 aa; hypothetical protein 570358 3092708 BPSL0515 Burkholderia pseudomallei K96243 hypothetical protein YP_107141.1 569732 D 272560 CDS YP_107142.1 53718156 3092046 570469..570969 1 NC_006350.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 570969 coaD 3092046 coaD Burkholderia pseudomallei K96243 phosphopantetheine adenylyltransferase YP_107142.1 570469 D 272560 CDS YP_107143.1 53718157 3094859 571032..571298 1 NC_006350.1 Similar to Chromatium vinosum ferredoxin Fdx SWALL:FER_CHRVI (SWALL:P00208) (82 aa) fasta scores: E(): 2.3e-19, 72% id in 75 aa, and to Ralstonia solanacearum probable ferredoxin protein rsc0391 or rs03359 SWALL:Q8Y2E5 (EMBL:AL646059) (82 aa) fasta scores: E(): 6.2e-26, 85.36% id in 82 aa; ferredoxin 571298 fdx 3094859 fdx Burkholderia pseudomallei K96243 ferredoxin YP_107143.1 571032 D 272560 CDS YP_107144.1 53718158 3094062 complement(571468..572538) 1 NC_006350.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 572538 3094062 BPSL0518 Burkholderia pseudomallei K96243 histidinol-phosphate aminotransferase YP_107144.1 571468 R 272560 CDS YP_107145.1 53718159 3093142 complement(572627..573232) 1 NC_006350.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 573232 pth 3093142 pth Burkholderia pseudomallei K96243 peptidyl-tRNA hydrolase YP_107145.1 572627 R 272560 CDS YP_107146.2 161723210 3094063 complement(573346..573960) 1 NC_006350.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 573960 3094063 BPSL0520 Burkholderia pseudomallei K96243 50S ribosomal protein L25 YP_107146.2 573346 R 272560 CDS YP_107147.1 53718161 3093690 complement(574124..575080) 1 NC_006350.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 575080 prs 3093690 prs Burkholderia pseudomallei K96243 ribose-phosphate pyrophosphokinase YP_107147.1 574124 R 272560 CDS YP_107148.1 53718162 3092875 complement(575258..576139) 1 NC_006350.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 576139 ipk 3092875 ipk Burkholderia pseudomallei K96243 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_107148.1 575258 R 272560 CDS YP_107149.1 53718163 3092876 complement(576173..576796) 1 NC_006350.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 576796 lolB 3092876 lolB Burkholderia pseudomallei K96243 outer membrane lipoprotein LolB YP_107149.1 576173 R 272560 CDS YP_107150.1 53718164 3093198 complement(576793..578613) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0398 or rs03366 SWALL:Q8Y2D8 (EMBL:AL646059) (642 aa) fasta scores: E(): 2.2e-43, 41.42% id in 630 aa> C-terminus is similar to the C-terminal region of Pseudomonas aeruginosa hypothetical protein pa4667 SWALL:YAG7_PSEAE (SWALL:P42810) (590 aa) fasta scores: E(): 1.7e-38, 30.1% id in 558 aa; hypothetical protein 578613 3093198 BPSL0525 Burkholderia pseudomallei K96243 hypothetical protein YP_107150.1 576793 R 272560 CDS YP_107151.1 53718165 3094283 578702..579532 1 NC_006350.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 579532 mutM 3094283 mutM Burkholderia pseudomallei K96243 formamidopyrimidine-DNA glycosylase YP_107151.1 578702 D 272560 CDS YP_107152.1 53718166 3092623 579537..580643 1 NC_006350.1 Similar to Escherichia coli A/G-specific adenine glycosylase MutY or MicA SWALL:MUTY_ECOLI (SWALL:P17802) (350 aa) fasta scores: E(): 6.2e-58, 44.69% id in 349 aa, and to Ralstonia solanacearum probable A/G-specific adenine glycosylase rsc0401 or rs03369 SWALL:Q8Y2D5 (EMBL:AL646059) (362 aa) fasta scores: E(): 7.1e-74, 59.67% id in 367 aa; A/G-specific adenine glycosylase 580643 mutY 3092623 mutY Burkholderia pseudomallei K96243 A/G-specific adenine glycosylase YP_107152.1 579537 D 272560 CDS YP_107153.1 53718167 3093199 complement(581037..581669) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0402 or rs03370 SWALL:Q8Y2D4 (EMBL:AL646059) (216 aa) fasta scores: E(): 1.1e-38, 50.72% id in 207 aa. Weakly similar to the N-terminal region of Bacillus subtilis ATP-dependent protease LonA or Lon SWALL:LON1_BACSU (SWALL:P37945) (774 aa) fasta scores: E(): 0.58, 21.35% id in 192 aa; hypothetical protein 581669 3093199 BPSL0528 Burkholderia pseudomallei K96243 hypothetical protein YP_107153.1 581037 R 272560 CDS YP_107154.1 53718168 3093646 complement(581696..582589) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0403 or rs03371 SWALL:Q8Y2D3 (EMBL:AL646059) (296 aa) fasta scores: E(): 4.3e-67, 62.75% id in 298 aa, and to Neisseria meningitidis hypothetical protein nmb0738 SWALL:Q9K080 (EMBL:AE002428) (284 aa) fasta scores: E(): 4.2e-46, 50.87% id in 287 aa; hypothetical protein 582589 3093646 BPSL0529 Burkholderia pseudomallei K96243 hypothetical protein YP_107154.1 581696 R 272560 CDS YP_107155.1 53718169 3093647 complement(582675..583643) 1 NC_006350.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 583643 3093647 BPSL0530 Burkholderia pseudomallei K96243 HPr kinase/phosphorylase YP_107155.1 582675 R 272560 CDS YP_107156.1 53718170 3092867 complement(583772..584227) 1 NC_006350.1 Similar to Escherichia coli nitrogen regulatory IIA protein PtsN or RpoP SWALL:PTSN_ECOLI (SWALL:P31222) (163 aa) fasta scores: E(): 1.9e-13, 36.3% id in 146 aa, and to Ralstonia solanacearum nitrogen regulatory IIA rsc0406 or rs03374 SWALL:Q8Y2D0 (EMBL:AL646059) (151 aa) fasta scores: E(): 2.6e-44, 78.14% id in 151 aa; nitrogen regulatory IIA protein 584227 3092867 BPSL0531 Burkholderia pseudomallei K96243 nitrogen regulatory IIA protein YP_107156.1 583772 R 272560 CDS YP_107157.1 53718171 3092868 complement(584514..584873) 1 NC_006350.1 Similar to Ralstonia solanacearum sigma-54 modulation protein rsc0407 or rs03375 SWALL:Q8Y2C9 (EMBL:AL646059) (117 aa) fasta scores: E(): 3.8e-25, 64.65% id in 116 aa, and to Alcaligenes eutrophus probable sigma(54) modulation protein SWALL:RP5M_ALCEU (SWALL:P28613) (130 aa) fasta scores: E(): 3.8e-23, 68% id in 100 aa; PTS system, EIIA component 584873 3092868 BPSL0532 Burkholderia pseudomallei K96243 PTS system, EIIA component YP_107157.1 584514 R 272560 CDS YP_107158.1 53718172 3094832 complement(585023..586531) 1 NC_006350.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 586531 rpoN 3094832 rpoN Burkholderia pseudomallei K96243 RNA polymerase factor sigma-54 YP_107158.1 585023 R 272560 CDS YP_107159.1 53718173 3091906 complement(586700..587476) 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc0409 or rs03377 SWALL:Q8Y2C7 (EMBL:AL646059) (262 aa) fasta scores: E(): 9.2e-66, 79.11% id in 249 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q9EX70 (EMBL:AJ131690) (263 aa) fasta scores: E(): 1.1e-64, 80.4% id in 250 aa; ABC transporter ATP-binding protein 587476 3091906 BPSL0534 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_107159.1 586700 R 272560 CDS YP_107160.1 53718174 3091907 complement(587473..588138) 1 NC_006350.1 Similar to Ralstonia solanacearum signal peptide protein rsc0410 or rs03378 SWALL:Q8Y2C6 (EMBL:AL646059) (191 aa) fasta scores: E(): 4.2e-29, 52.68% id in 186 aa. N-terminal region is similar to Alcaligenes eutrophus hypothetical protein SWALL:Q9EX71 (EMBL:AJ131690) (155 aa) fasta scores: E(): 6.9e-19, 51.4% id in 142 aa; OstA-like protein 588138 3091907 BPSL0535 Burkholderia pseudomallei K96243 OstA-like protein YP_107160.1 587473 R 272560 CDS YP_107161.1 53718175 3092936 complement(588157..588771) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0411 or rs03379 SWALL:Q8Y2C5 (EMBL:AL646059) (210 aa) fasta scores: E(): 2.7e-28, 49.18% id in 183 aa, and to Pseudomonas aeruginosa hypothetical protein pa4459 SWALL:Q9HVV8 (EMBL:AE004860) (190 aa) fasta scores: E(): 8.8e-07, 27.89% id in 190 aa; hypothetical protein 588771 3092936 BPSL0536 Burkholderia pseudomallei K96243 hypothetical protein YP_107161.1 588157 R 272560 CDS YP_107162.1 53718176 3092937 complement(588777..589316) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0412 or rs03380 SWALL:Q8Y2C4 (EMBL:AL646059) (195 aa) fasta scores: E(): 1e-34, 60.47% id in 167 aa, and to Pseudomonas aeruginosa hypothetical protein pa4458 SWALL:Q9HVV9 (EMBL:AE004860) (179 aa) fasta scores: E(): 9.8e-29, 52.9% id in 172 aa; hypothetical protein 589316 3092937 BPSL0537 Burkholderia pseudomallei K96243 hypothetical protein YP_107162.1 588777 R 272560 CDS YP_107163.1 53718177 3092678 complement(589316..590299) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0413 or rs03381 SWALL:Q8Y2C3 (EMBL:AL646059) (333 aa) fasta scores: E(): 5.4e-79, 69.11% id in 327 aa, and to Xanthomonas campestris polysialic acid capsule expression protein xcc2797 SWALL:AAM42069 (EMBL:AE012392) (333 aa) fasta scores: E(): 3.4e-68, 59.69% id in 325 aa. Similar to BPSL2770, 50.649% identity (52.000% ungapped) in 308 aa overlap; hypothetical protein 590299 3092678 BPSL0538 Burkholderia pseudomallei K96243 hypothetical protein YP_107163.1 589316 R 272560 CDS YP_107164.1 53718178 3092679 590427..592436 1 NC_006350.1 N-terminal region is similar to Escherichia coli glutathione-regulated potassium-efflux system protein KefB or TrkB SWALL:KEFB_ECOLI (SWALL:P45522) (601 aa) fasta scores: E(): 4.3e-51, 33.63% id in 562 aa. Full length CDS is similar to Ralstonia solanacearum glutathione-regulated potassium-efflux system K+/H+ antiporter transmembrane protein rsc0414 or rs03382 SWALL:Q8Y2C2 (EMBL:AL646059) (659 aa) fasta scores: E(): 2.6e-158, 66.86% id in 658 aa; sodium/hydrogen exchanger family protein 592436 3092679 BPSL0539 Burkholderia pseudomallei K96243 sodium/hydrogen exchanger family protein YP_107164.1 590427 D 272560 CDS YP_107165.1 53718179 3094203 592520..593083 1 NC_006350.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 593083 3094203 BPSL0540 Burkholderia pseudomallei K96243 adenine phosphoribosyltransferase YP_107165.1 592520 D 272560 CDS YP_107166.1 53718180 3094204 593177..593791 1 NC_006350.1 Similar to Escherichia coli homoserine/homoserine lactone efflux protein RhtB SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 3e-15, 30.1% id in 196 aa, and to Ralstonia solanacearum probable transport transmembrane protein rsc0418 or rs03386 SWALL:Q8Y2B8 (EMBL:AL646059) (206 aa) fasta scores: E(): 1.7e-46, 61.65% id in 206 aa; LysE type translocator 593791 3094204 BPSL0541 Burkholderia pseudomallei K96243 LysE type translocator YP_107166.1 593177 D 272560 CDS YP_107167.1 53718181 3094056 593804..594661 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1874 or rs03434 SWALL:Q8XY89 (EMBL:AL646067) (267 aa) fasta scores: E(): 5e-43, 48.88% id in 268 aa, and to the C-terminal region of Arabidopsis thaliana hypothetical protein AT5G19460 SWALL:Q8VXZ0 (EMBL:AY074342) (374 aa) fasta scores: E(): 8.2e-25, 35.58% id in 267 aa; NUDIX domain-containing protein 594661 3094056 BPSL0542 Burkholderia pseudomallei K96243 NUDIX domain-containing protein YP_107167.1 593804 D 272560 CDS YP_107168.1 53718182 3094057 594713..595594 1 NC_006350.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 595594 purU 3094057 purU Burkholderia pseudomallei K96243 formyltetrahydrofolate deformylase YP_107168.1 594713 D 272560 CDS YP_107169.1 53718183 3093773 complement(595893..596927) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0411 or rs00868 SWALL:Q8XSQ6 (EMBL:AL646078) (341 aa) fasta scores: E(): 8.7e-43, 44.44% id in 333 aa, and to weakly similar to Listeria monocytogenes hypothetical protein lmo0949 SWALL:Q8Y8F5 (EMBL:AL591977) (348 aa) fasta scores: E(): 6.8e-06, 23.16% id in 341 aa; hypothetical protein 596927 3093773 BPSL0544 Burkholderia pseudomallei K96243 hypothetical protein YP_107169.1 595893 R 272560 CDS YP_107170.1 53718184 3091749 complement(597179..600046) 1 NC_006350.1 Similar to Neisseria gonorrhoeae excinuclease ABC subunit A UvrA SWALL:UVRA_NEIGO (SWALL:Q50968) (950 aa) fasta scores: E(): 4e-202, 73.84% id in 952 aa, and to Ralstonia solanacearum probable excinuclease ABC subunit A rsc0420 or rs03388 SWALL:Q8Y2B6 (EMBL:AL646059) (954 aa) fasta scores: E(): 0, 84.8% id in 954 aa; excinuclease ABC subunit A 600046 uvrA 3091749 uvrA Burkholderia pseudomallei K96243 excinuclease ABC subunit A YP_107170.1 597179 R 272560 CDS YP_107171.1 53718185 3093774 600260..601447 1 NC_006350.1 Similar to Ralstonia solanacearum multidrug-efflux transporter transmembrane protein rsc0421 or rs03389 SWALL:Q8Y2B5 (EMBL:AL646059) (387 aa) fasta scores: E(): 2.8e-94, 67.01% id in 382 aa. Weakly similar to Staphylococcus aureus quinolone resistance protein NorA SWALL:NORA_STAAM (SWALL:P21191) (388 aa) fasta scores: E(): 6.5e-11, 24.73% id in 372 aa; transporter protein 601447 3093774 BPSL0546 Burkholderia pseudomallei K96243 transporter protein YP_107171.1 600260 D 272560 CDS YP_107172.1 53718186 3094097 601561..602115 1 NC_006350.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 602115 ssb 3094097 ssb Burkholderia pseudomallei K96243 single-stranded DNA-binding protein YP_107172.1 601561 D 272560 CDS YP_107173.1 53718187 3093968 602532..606566 1 NC_006350.1 hypothetical protein 606566 3093968 BPSL0548 Burkholderia pseudomallei K96243 hypothetical protein YP_107173.1 602532 D 272560 CDS YP_107174.1 53718188 3093969 complement(606593..607069) 1 NC_006350.1 N-terminus is similar to Corynebacterium glutamicum hypothetical protein SWALL:Q8VVJ6 (EMBL:AJ420072) (81 aa) fasta scores: E(): 0.0066, 46.66% id in 60 aa, and to the N-terminal region of Lactobacillus plantarum WCFS1 prophage LP1 protein 8 SWALL:Q88YW0 (EMBL:AL935253) (120 aa) fasta scores: E(): 0.008, 50% id in 56 aa; DNA-binding protein 607069 3093969 BPSL0549A Burkholderia pseudomallei K96243 DNA-binding protein YP_107174.1 606593 R 272560 CDS YP_107175.1 53718189 3093287 607232..607906 1 NC_006350.1 hypothetical protein 607906 3093287 BPSL0550 Burkholderia pseudomallei K96243 hypothetical protein YP_107175.1 607232 D 272560 CDS YP_107176.1 53718190 3093288 608007..608579 1 NC_006350.1 No significant database matches. Similar to BPSL0759, 75.904% identity (76.829% ungapped) in 166 aa overlap; hypothetical protein 608579 3093288 BPSL0551 Burkholderia pseudomallei K96243 hypothetical protein YP_107176.1 608007 D 272560 CDS YP_107177.1 53718191 3092587 608641..608901 1 NC_006350.1 hypothetical protein 608901 3092587 BPSL0552 Burkholderia pseudomallei K96243 hypothetical protein YP_107177.1 608641 D 272560 CDS YP_107178.1 53718192 3092588 608994..609410 1 NC_006350.1 Poor database matches. N-terminus is weakly similar to the N-terminal region of Rhizobium etli hypothetical protein YH035 SWALL:AAM54968 (EMBL:U80928) (101 aa) fasta scores: E(): 0.0068, 40.84% id in 71 aa; DNA-binding protein 609410 3092588 BPSL0553 Burkholderia pseudomallei K96243 DNA-binding protein YP_107178.1 608994 D 272560 CDS YP_107179.1 53718193 3093159 610092..610643 1 NC_006350.1 Similar to bacteriophage phiE125 protein gp29 SWALL:Q8W6S2 (EMBL:AF447491) (186 aa) fasta scores: E(): 7.3e-05, 30.32% id in 155 aa. N-terminus is similar to Ralstonia solanacearum hypothetical protein rsp0632 or rs03735 SWALL:Q8XS49 (EMBL:AL646079) (96 aa) fasta scores: E(): 7.2e-11, 44.56% id in 92 aa; hypothetical protein 610643 3093159 BPSL0554 Burkholderia pseudomallei K96243 hypothetical protein YP_107179.1 610092 D 272560 CDS YP_107180.1 53718194 3093160 610643..611533 1 NC_006350.1 Similar to the C-terminal region of Ralstonia solanacearum transmembrane protein rsc1707 or rs02900 SWALL:Q8XYQ1 (EMBL:AL646066) (371 aa) fasta scores: E(): 1.6e-25, 36.84% id in 285 aa; hypothetical protein 611533 3093160 BPSL0555 Burkholderia pseudomallei K96243 hypothetical protein YP_107180.1 610643 D 272560 CDS YP_107181.1 53718195 3093336 611544..612173 1 NC_006350.1 hypothetical protein 612173 3093336 BPSL0556 Burkholderia pseudomallei K96243 hypothetical protein YP_107181.1 611544 D 272560 CDS YP_107182.1 53718196 3093337 complement(612265..612618) 1 NC_006350.1 No significant database matches. Doubtful CDS; hypothetical protein 612618 3093337 BPSL0557 Burkholderia pseudomallei K96243 hypothetical protein YP_107182.1 612265 R 272560 CDS YP_107183.1 53718197 3091864 complement(612642..612848) 1 NC_006350.1 Similar to internal regions of Chlorobium tepidum DNA helicase, SWALL:Q8KC08 (EMBL:AE012917) (1510 aa) fasta scores: E(): 1.3e-08, 76.59% id in 47 aa, and to Clostridium acetobutylicum superfamily I DNA helicase SWALL:Q97ES1 (EMBL:AE007800) (1351 aa) fasta scores: E(): 0.94, 50% id in 46 aa; hypothetical protein 612848 3091864 BPSL0557A Burkholderia pseudomallei K96243 hypothetical protein YP_107183.1 612642 R 272560 CDS YP_107184.1 53718198 3091865 613047..613364 1 NC_006350.1 C-terminal region is similar to Rhizobium etli hypothetical protein YH035 SWALL:AAM54968 (EMBL:U80928) (101 aa) fasta scores: E(): 6.2e-07, 40.81% id in 98 aa, and Caulobacter crescentus Cro/CI family transcriptional regulator cc2771 SWALL:Q9A4Q9 (EMBL:AE005942) (119 aa) fasta scores: E(): 0.046, 35.48% id in 93 aa. Possible alternative translational start site; DNA-binding protein 613364 3091865 BPSL0558 Burkholderia pseudomallei K96243 DNA-binding protein YP_107184.1 613047 D 272560 CDS YP_107185.1 53718199 3092889 613364..613921 1 NC_006350.1 No significant database matches to the full length CDS. C-terminal region is similar to Sinorhizobium meliloti phage PBC5 hypothetical protein Orf68 SWALL:Q8W6F9 (EMBL:AF448724) (127 aa) fasta scores: E(): 3.4, 31.53% id in 111 aa; hypothetical protein 613921 3092889 BPSL0559 Burkholderia pseudomallei K96243 hypothetical protein YP_107185.1 613364 D 272560 CDS YP_107186.1 53718200 3092890 complement(614088..614699) 1 NC_006350.1 Poor database matches. Weakly similar to an internal region of Herpes simplex virus DNA polymerase processivity factor UL42 SWALL:VPAP_HSV11 (SWALL:P10226) (488 aa) fasta scores: E(): 4.4, 27.48% id in 211 aa; hypothetical protein 614699 3092890 BPSL0560 Burkholderia pseudomallei K96243 hypothetical protein YP_107186.1 614088 R 272560 CDS YP_107187.1 53718201 3094645 complement(614880..615416) 1 NC_006350.1 Poor database matches. C-terminal region is weakly similar to Caulobacter crescentus hypothetical protein CC3552 SWALL:Q9A2K9 (EMBL:AE006014) (118 aa) fasta scores: E(): 2.4, 28.57% id in 98 aa; hypothetical protein 615416 3094645 BPSL0561 Burkholderia pseudomallei K96243 hypothetical protein YP_107187.1 614880 R 272560 CDS YP_107188.1 53718202 3094646 615702..616079 1 NC_006350.1 N-terminus is similar to the N-terminal region of Stigmatella aurantiaca transcriptional repressor SWALL:Q93TW4 (EMBL:AF319998) (119 aa) fasta scores: E(): 3.1e-06, 48.64% id in 74 aa. Full length CDS is weakly similar to Clostridium acetobutylicum predicted transcriptional regulator cac1578 SWALL:Q97IR2 (EMBL:AE007667) (110 aa) fasta scores: E(): 0.01, 27.36% id in 95 aa; DNA-binding protein 616079 3094646 BPSL0562 Burkholderia pseudomallei K96243 DNA-binding protein YP_107188.1 615702 D 272560 CDS YP_107189.1 53718203 3092974 complement(616192..616656) 1 NC_006350.1 hypothetical protein 616656 3092974 BPSL0563 Burkholderia pseudomallei K96243 hypothetical protein YP_107189.1 616192 R 272560 CDS YP_107190.1 53718204 3092975 complement(616778..617386) 1 NC_006350.1 Poor database matches. C-terminus is similar to the C-terminal region of Anabaena sp. hypothetical protein ALL4139 SWALL:Q8YPQ3 (EMBL:AP003595) (238 aa) fasta scores: E(): 8.9e-06, 33.11% id in 151 aa; hypothetical protein 617386 3092975 BPSL0564 Burkholderia pseudomallei K96243 hypothetical protein YP_107190.1 616778 R 272560 CDS YP_107191.1 53718205 3093873 complement(617396..621349) 1 NC_006350.1 hypothetical protein 621349 3093873 BPSL0565 Burkholderia pseudomallei K96243 hypothetical protein YP_107191.1 617396 R 272560 CDS YP_107192.1 53718206 3093874 complement(621413..623332) 1 NC_006350.1 Poor database matches. Weakly similar to Halobacterium sp. hypothetical protein VNG6173c SWALL:Q9HHY2 (EMBL:AE005152) (667 aa) fasta scores: E(): 0.0023, 22.22% id in 513 aa, and to Agrobacterium tumefaciens hypothetical protein Yme SWALL:O52294 (EMBL:AF242881) (660 aa) fasta scores: E(): 0.034, 21.92% id in 625 aa; hypothetical protein 623332 3093874 BPSL0566 Burkholderia pseudomallei K96243 hypothetical protein YP_107192.1 621413 R 272560 CDS YP_107193.1 53718207 3094548 complement(623319..623780) 1 NC_006350.1 hypothetical protein 623780 3094548 BPSL0567 Burkholderia pseudomallei K96243 hypothetical protein YP_107193.1 623319 R 272560 CDS YP_107194.1 53718208 3094549 complement(623813..624394) 1 NC_006350.1 Poor database matches. Weakly similar to the N-terminal region of Bacillus halodurans dipeptidase bh2271 SWALL:Q9KAL6 (EMBL:AP001515) (310 aa) fasta scores: E(): 3.6, 20.1% id in 194 aa; hypothetical protein 624394 3094549 BPSL0568 Burkholderia pseudomallei K96243 hypothetical protein YP_107194.1 623813 R 272560 CDS YP_107195.1 53718209 3092662 625112..625948 1 NC_006350.1 Similar to Thermoplasma acidophilum hypothetical protein TA0490 SWALL:Q9HKV3 (EMBL:AL445064) (277 aa) fasta scores: E(): 9.1e-47, 48.16% id in 272 aa, and to Thermoplasma volcanium hypothetical protein TV0581 or tvg0570508 SWALL:Q97B76 (EMBL:AP000992) (277 aa) fasta scores: E(): 1.1e-45, 47.42% id in 272 aa; hypothetical protein 625948 3092662 BPSL0569 Burkholderia pseudomallei K96243 hypothetical protein YP_107195.1 625112 D 272560 CDS YP_107196.1 53718210 3092663 625952..626689 1 NC_006350.1 Similar to Thermoplasma acidophilum hypothetical protein TA0489 SWALL:Q9HKV4 (EMBL:AL445064) (231 aa) fasta scores: E(): 4.9e-10, 25.41% id in 240 aa, and to Thermoplasma volcanium hypothetical protein TV0582 or tvg0571216 SWALL:Q97B75 (EMBL:AP000992) (232 aa) fasta scores: E(): 3e-07, 24.78% id in 230 aa; hypothetical protein 626689 3092663 BPSL0570 Burkholderia pseudomallei K96243 hypothetical protein YP_107196.1 625952 D 272560 CDS YP_107197.1 53718211 3092239 626686..628548 1 NC_006350.1 No significant database matches to the full length CDS. N-terminus is similar to the C-terminal regions of Thermoplasma acidophilum hypothetical protein TA0488 SWALL:Q9HKV5 (EMBL:AL445064) (409 aa) fasta scores: E(): 4.6e-16, 31.67% id in 281 aa, and Thermoplasma volcanium hypothetical protein TV0583 or TVG0571194 SWALL:Q97B74 (EMBL:AP000992) (401 aa) fasta scores: E(): 2e-15, 29.43% id in 282 aa; hypothetical protein 628548 3092239 BPSL0571 Burkholderia pseudomallei K96243 hypothetical protein YP_107197.1 626686 D 272560 CDS YP_107198.1 53718212 3092240 complement(628668..629738) 1 NC_006350.1 hypothetical protein 629738 3092240 BPSL0572 Burkholderia pseudomallei K96243 hypothetical protein YP_107198.1 628668 R 272560 CDS YP_107199.1 53718213 3094694 629903..630907 1 NC_006350.1 hypothetical protein 630907 3094694 BPSL0573 Burkholderia pseudomallei K96243 hypothetical protein YP_107199.1 629903 D 272560 CDS YP_107200.1 53718214 3094695 631502..633238 1 NC_006350.1 Poor database matches. Internal region is weakly similar to an internal region of Bacillus sp. subtilisin precursor Sub1 SWALL:SUBT_BACS9 (SWALL:P28842) (420 aa) fasta scores: E(): 0.036, 28.52% id in 305 aa. N-terminus is weakly similar to the N-terminal region of Thermoanaerobacter tengcongensis subtilisin-like serine proteases TTE0824 SWALL:Q8RBJ2 (EMBL:AE013049) (561 aa) fasta scores: E(): 0.003, 26.44% id in 484 aa; subtilase 633238 3094695 BPSL0574 Burkholderia pseudomallei K96243 subtilase YP_107200.1 631502 D 272560 CDS YP_107202.1 53718216 3093923 complement(633550..633945) 1 NC_006350.1 hypothetical protein 633945 3093923 BPSL0574B Burkholderia pseudomallei K96243 hypothetical protein YP_107202.1 633550 R 272560 CDS YP_107203.1 53718217 3094487 complement(633977..635932) 1 NC_006350.1 Poor database matches. N-terminus is weakly similar to the N-terminal region of Xanthomonas axonopodis hypothetical protein XAC2902 SWALL:AAM37747 (EMBL:AE011932) (616 aa) fasta scores: E(): 3.3e-08, 23.19% id in 608 aa; hypothetical protein 635932 3094487 BPSL0575 Burkholderia pseudomallei K96243 hypothetical protein YP_107203.1 633977 R 272560 CDS YP_107204.1 53718218 3094488 complement(635943..637436) 1 NC_006350.1 Weakly similar to Pasteurella multocida hypothetical protein PM1948 SWALL:Q9CJP6 (EMBL:AE006231) (506 aa) fasta scores: E(): 3.4e-08, 23.3% id in 502 aa, and to Xanthomonas axonopodis hypothetical protein XAC2903 SWALL:AAM37748 (EMBL:AE011932) (526 aa) fasta scores: E(): 6.7e-07, 25.44% id in 507 aa; hypothetical protein 637436 3094488 BPSL0576 Burkholderia pseudomallei K96243 hypothetical protein YP_107204.1 635943 R 272560 CDS YP_107205.1 53718219 3093791 complement(637433..638611) 1 NC_006350.1 Weakly similar to Xanthomonas axonopodis integrase/recombinase Int or XAC2904 SWALL:AAM37749 (EMBL:AE011932) (439 aa) fasta scores: E(): 1.3e-07, 24.29% id in 428 aa, and to Escherichia coli O157:H7 site specific recombinase ECS3512 SWALL:Q8X3D8 (EMBL:AP002562) (401 aa) fasta scores: E(): 9e-07, 23.34% id in 377 aa; phage integrase 638611 3093791 BPSL0577 Burkholderia pseudomallei K96243 phage integrase YP_107205.1 637433 R 272560 CDS YP_107206.1 53718220 3093792 complement(640045..640776) 1 NC_006350.1 Weakly similar to Pseudomonas putida, and Pseudomonas sp. carboxymethylenebutenolidase ClcD SWALL:CLCD_PSEPU (SWALL:P11453) (236 aa) fasta scores: E(): 3.7e-05, 24.65% id in 215 aa. Similar to Streptomyces coelicolor hypothetical protein SCO0254 or SCJ9A.33c SWALL:Q9S1N7 (EMBL:AL109972) (246 aa) fasta scores: E(): 1.6e-24, 38.43% id in 242 aa; dienelactone hydrolase 640776 3093792 BPSL0578 Burkholderia pseudomallei K96243 dienelactone hydrolase YP_107206.1 640045 R 272560 CDS YP_107207.1 53718221 3094635 641119..642699 1 NC_006350.1 hypothetical protein 642699 3094635 BPSL0579 Burkholderia pseudomallei K96243 hypothetical protein YP_107207.1 641119 D 272560 CDS YP_107208.1 53718222 3094636 complement(642861..643112) 1 NC_006350.1 hypothetical protein 643112 3094636 BPSL0580 Burkholderia pseudomallei K96243 hypothetical protein YP_107208.1 642861 R 272560 CDS YP_107209.1 53718223 3094274 complement(643285..643602) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2699 or rs00020 SWALL:Q8XVX6 (EMBL:AL646071) (105 aa) fasta scores: E(): 1.7e-16, 55.44% id in 101 aa; hypothetical protein 643602 3094274 BPSL0581 Burkholderia pseudomallei K96243 hypothetical protein YP_107209.1 643285 R 272560 CDS YP_107210.1 53718224 3094275 complement(644090..646162) 1 NC_006350.1 Poor database matches. Internal region is similar to an internal region of Staphylococcus aureus exfoliative toxin B plasmid hypothetical protein Orf24 SWALL:Q8VVS1 (EMBL:AP003088) (590 aa) fasta scores: E(): 4.4e-06, 22.03% id in 472 aa; hypothetical protein 646162 3094275 BPSL0582 Burkholderia pseudomallei K96243 hypothetical protein YP_107210.1 644090 R 272560 CDS YP_107211.1 53718225 3091803 complement(646155..647489) 1 NC_006350.1 hypothetical protein 647489 3091803 BPSL0583 Burkholderia pseudomallei K96243 hypothetical protein YP_107211.1 646155 R 272560 CDS YP_107212.1 53718226 3091804 complement(648080..649468) 1 NC_006350.1 hypothetical protein 649468 3091804 BPSL0584 Burkholderia pseudomallei K96243 hypothetical protein YP_107212.1 648080 R 272560 CDS YP_107213.1 53718227 3094489 complement(649491..649814) 1 NC_006350.1 hypothetical protein 649814 3094489 BPSL0585 Burkholderia pseudomallei K96243 hypothetical protein YP_107213.1 649491 R 272560 CDS YP_107214.1 53718228 3094490 complement(649836..650156) 1 NC_006350.1 hypothetical protein 650156 3094490 BPSL0586 Burkholderia pseudomallei K96243 hypothetical protein YP_107214.1 649836 R 272560 CDS YP_107215.1 53718229 3093827 650966..651667 1 NC_006350.1 Poor database matches. N-terminus is similar to the N-terminal region of Staphylococcus aureus aureus hypothetical protein MW0047 SWALL:Q8VUW0 (EMBL:AB063172) (206 aa) fasta scores: E(): 7.5, 26.19% id in 84 aa; hypothetical protein 651667 3093827 BPSL0586a Burkholderia pseudomallei K96243 hypothetical protein YP_107215.1 650966 D 272560 CDS YP_107216.1 53718230 3093828 complement(651797..652423) 1 NC_006350.1 Similar to Escherichia coli recombinase SWALL:Q8VR85 (EMBL:AF447814) (200 aa) fasta scores: E(): 1.2e-47, 61.22% id in 196 aa, and to the C-terminal region of Escherichia coli integrase/recombinase XerD or XprB SWALL:XERD_ECOLI (SWALL:P21891) (298 aa) fasta scores: E(): 0.00042, 23.03% id in 165 aa; phage integrase 652423 3093828 BPSL0587 Burkholderia pseudomallei K96243 phage integrase YP_107216.1 651797 R 272560 CDS YP_107217.1 53718231 3093372 complement(652627..653193) 1 NC_006350.1 Poor database matches. Weakly similar to Caenorhabditis elegans hypothetical protein R13F6.1 SWALL:Q95QB8 (EMBL:U00046) (149 aa) fasta scores: E(): 1.9, 25.75% id in 132 aa; hypothetical protein 653193 3093372 BPSL0588 Burkholderia pseudomallei K96243 hypothetical protein YP_107217.1 652627 R 272560 CDS YP_107218.1 53718232 3093373 complement(653396..653746) 1 NC_006350.1 Similar to Thermoanaerobacter tengcongensis hypothetical protein TTE0299 SWALL:Q8RCV6 (EMBL:AE013003) (110 aa) fasta scores: E(): 3e-11, 44.21% id in 95 aa, and to Alcaligenes eutrophus hypothetical protein in acoC 3'region SWALL:YAC7_ALCEU (SWALL:P27749) (113 aa) fasta scores: E(): 6.7e-11, 40% id in 95 aa; hypothetical protein 653746 3093373 BPSL0589 Burkholderia pseudomallei K96243 hypothetical protein YP_107218.1 653396 R 272560 CDS YP_107219.1 53718233 3092206 complement(654016..660111) 1 NC_006350.1 N-terminus is weakly similar to Photorhabdus luminescens insecticidal toxin complex protein TcaC SWALL:O85153 (EMBL:AF046867) (1485 aa) fasta scores: E(): 3.7e-18, 22.82% id in 1472 aa, and to the N-terminal reion of Yersinia pestis insecticidal toxin complex YPO3678 SWALL:Q8ZAV4 (EMBL:AJ414158) (1496 aa) fasta scores: E(): 7.7e-20, 25.34% id in 1227 aa; hypothetical protein 660111 3092206 BPSL0590 Burkholderia pseudomallei K96243 hypothetical protein YP_107219.1 654016 R 272560 CDS YP_107220.1 53718234 3092207 complement(660133..663417) 1 NC_006350.1 Internal region is similar to the C-terminal region of Photorhabdus luminescens insecticidal toxin complex protein TccB SWALL:O85156 (EMBL:AF047028) (1565 aa) fasta scores: E(): 0.028, 22.05% id in 544 aa. Contains coiled-coiled domains, residues 520 to 549 and 640 to 666; hypothetical protein 663417 3092207 BPSL0591 Burkholderia pseudomallei K96243 hypothetical protein YP_107220.1 660133 R 272560 CDS YP_107221.1 53718235 3093609 complement(664602..664985) 1 NC_006350.1 hypothetical protein 664985 3093609 BPSL0592 Burkholderia pseudomallei K96243 hypothetical protein YP_107221.1 664602 R 272560 CDS YP_107222.1 53718236 3093610 complement(665003..665440) 1 NC_006350.1 hypothetical protein 665440 3093610 BPSL0593 Burkholderia pseudomallei K96243 hypothetical protein YP_107222.1 665003 R 272560 CDS YP_107223.1 53718237 3093648 complement(665667..666014) 1 NC_006350.1 hypothetical protein 666014 3093648 BPSL0594 Burkholderia pseudomallei K96243 hypothetical protein YP_107223.1 665667 R 272560 CDS YP_107224.1 53718238 3093649 complement(666528..666893) 1 NC_006350.1 hypothetical protein 666893 3093649 BPSL0595 Burkholderia pseudomallei K96243 hypothetical protein YP_107224.1 666528 R 272560 CDS YP_107225.1 53718239 3094462 667141..668148 1 NC_006350.1 Poor database matches. N-terminus is weakly similar to the N-terminal region of Streptomyces coelicolor hypothetical protein SCO1806 or SCI33.05c SWALL:Q9AJX1 (EMBL:AL513407) (876 aa) fasta scores: E(): 0.071, 26.79% id in 321 aa; DNA-binding protein 668148 3094462 BPSL0596 Burkholderia pseudomallei K96243 DNA-binding protein YP_107225.1 667141 D 272560 CDS YP_107226.1 53718240 3094463 668159..672238 1 NC_006350.1 No significant database matches to the full length CDS. N-terminal region is similar to Myxococcus xanthus serine/threonine-protein kinase Pkn2 SWALL:PKN2_MYXXA (SWALL:P54736) (830 aa) fasta scores: E(): 2e-20, 26.44% id in 624 aa. C-terminal region is similar to Rhizobium meliloti adenylate cyclase ra0987 or sma1789 SWALL:Q92Y97 (EMBL:AE007284) (1118 aa) fasta scores: E(): 8.3e-47, 27.54% id in 1042 aa; protein kinase 672238 3094463 BPSL0597 Burkholderia pseudomallei K96243 protein kinase YP_107226.1 668159 D 272560 CDS YP_107227.1 53718241 3093942 672235..672597 1 NC_006350.1 hypothetical protein 672597 3093942 BPSL0598 Burkholderia pseudomallei K96243 hypothetical protein YP_107227.1 672235 D 272560 CDS YP_107228.1 53718242 3093943 672599..672961 1 NC_006350.1 hypothetical protein 672961 3093943 BPSL0599 Burkholderia pseudomallei K96243 hypothetical protein YP_107228.1 672599 D 272560 CDS YP_107229.1 53718243 3092918 673053..675353 1 NC_006350.1 Poor database matches. Similar to Streptomyces violaceoruber granaticin biosynthetic gene cluster protein Gra-Orf12 SWALL:Q9ZA45 (EMBL:AJ011500) (751 aa) fasta scores: E(): 6.9e-09, 34.97% id in 729 aa; hypothetical protein 675353 3092918 BPSL0600 Burkholderia pseudomallei K96243 hypothetical protein YP_107229.1 673053 D 272560 CDS YP_107230.1 53718244 3092919 675423..676199 1 NC_006350.1 Similar to Ralstonia solanacearum aldolase rsc0806 or rs05016 SWALL:Q8Y184 (EMBL:AL646061) (261 aa) fasta scores: E(): 7.7e-36, 43.52% id in 255 aa, and to an internal region of Homo sapiens alpha adducin ADD1 or ADDA SWALL:ADDA_HUMAN (SWALL:P35611) (737 aa) fasta scores: E(): 9.6e-27, 41.4% id in 256 aa; aldolase 676199 3092919 BPSL0601 Burkholderia pseudomallei K96243 aldolase YP_107230.1 675423 D 272560 CDS YP_107231.1 53718245 3092194 676682..679045 1 NC_006350.1 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Pseudomonas aeruginosa hypothetical protein PA0861 SWALL:Q9I580 (EMBL:AE004521) (818 aa) fasta scores: E(): 6.4e-71, 41.01% id in 668 aa, and Rhizobium loti hypothetical protein MLR3171 SWALL:Q98GU5 (EMBL:AP003001) (832 aa) fasta scores: E(): 6.8e-65, 38.74% id in 671 aa; hypothetical protein 679045 3092194 BPSL0602 Burkholderia pseudomallei K96243 hypothetical protein YP_107231.1 676682 D 272560 CDS YP_107232.1 53718246 3092195 complement(679223..680491) 1 NC_006350.1 Similar to Escherichia coli O-antigen transporter RfbX or Wzx SWALL:RFBX_ECOLI (SWALL:P37746) (415 aa) fasta scores: E(): 4.6e-37, 29.34% id in 409 aa, and to Methanobacterium thermoautotrophicum O-antigen transporter MTH347 SWALL:O26447 (EMBL:AE000819) (420 aa) fasta scores: E(): 1.2e-44, 32.34% id in 405 aa; polysaccharide biosynthesis protein 680491 3092195 BPSL0603 Burkholderia pseudomallei K96243 polysaccharide biosynthesis protein YP_107232.1 679223 R 272560 CDS YP_107233.1 53718247 3094501 complement(680568..681764) 1 NC_006350.1 Similar to Escherichia coli glycosyltransferase WcaO SWALL:Q9X4C4 (EMBL:AF104912) (393 aa) fasta scores: E(): 1.5e-22, 28.93% id in 356 aa, and to Rhizobium meliloti glycosyltransferase, forming alpha-gylcosyl linkages protein ExpE4 or rb0887 or smb21311 SWALL:P96434 (EMBL:Z79692) (420 aa) fasta scores: E(): 8e-10, 28.57% id in 350 aa; glycosyl transferase 681764 3094501 BPSL0604 Burkholderia pseudomallei K96243 glycosyl transferase YP_107233.1 680568 R 272560 CDS YP_107234.1 53718248 3093567 complement(681799..683391) 1 NC_006350.1 Similar to Salmonella typhimurium mannose-1-phosphate guanylyltransferase ManC or CpsB or RfbM SWALL:MANC_SALTY (SWALL:P26340) (480 aa) fasta scores: E(): 2.4e-83, 52.26% id in 486 aa, and to Aeromonas hydrophila mannose-1-phosphate guanylyltransferase ManC SWALL:AAM22554 (EMBL:AF343089) (501 aa) fasta scores: E(): 1.2e-88, 47.74% id in 488 aa. Similar to BPSS1835, 63.843% identity (64.644% ungapped) in 484 aa overlap. CDS is extended at the C-terminus in comparison to orthologues and paralogue; mannose-1-phosphate guanylyltransferase 683391 manC 3093567 manC Burkholderia pseudomallei K96243 mannose-1-phosphate guanylyltransferase YP_107234.1 681799 R 272560 CDS YP_107235.1 53718249 3094502 complement(683388..684038) 1 NC_006350.1 N-terminal region is similar to Escherichia coli protein ElaA SWALL:ELAA_ECOLI (SWALL:P52077) (153 aa) fasta scores: E(): 1.9e-10, 34% id in 150 aa, and to Pseudomonas aeruginosa hypothetical protein PA0115 SWALL:Q9I717 (EMBL:AE004449) (150 aa) fasta scores: E(): 2.2e-10, 34.43% id in 151 aa. CDS is extended at the C-terminus in comparison to orthologues; hypothetical protein 684038 3094502 BPSL0606 Burkholderia pseudomallei K96243 hypothetical protein YP_107235.1 683388 R 272560 CDS YP_107236.1 53718250 3092454 684416..685657 1 NC_006350.1 Similar to Actinobacillus actinomycetemcomitans mannosyl transferase Orf7 SWALL:Q9JRR8 (EMBL:AB041266) (372 aa) fasta scores: E(): 1.6e-73, 53.51% id in 370 aa, and to Anabaena sp. mannosyl transferase ALL4830 SWALL:Q8YMU7 (EMBL:AP003597) (379 aa) fasta scores: E(): 3.6e-64, 49.18% id in 370 aa. CDS is extended at the C-terminus in comparison to orthologues. N-terminal region is similar to an internal region of BPSS1684, 66.067% identity (67.102% ungapped) in 389 aa overlap; glycosyl transferase 685657 3092454 BPSL0607 Burkholderia pseudomallei K96243 glycosyl transferase YP_107236.1 684416 D 272560 CDS YP_107237.1 53718251 3092455 685685..686419 1 NC_006350.1 Similar to Aeromonas hydrophila hypothetical protein SWALL:Q9X647 (EMBL:AF131869) (264 aa) fasta scores: E(): 2.7e-11, 32.66% id in 251 aa; PAP2 superfamily protein 686419 3092455 BPSL0608 Burkholderia pseudomallei K96243 PAP2 superfamily protein YP_107237.1 685685 D 272560 CDS YP_107238.1 53718252 3094535 687164..688552 1 NC_006350.1 Similar to Escherichia coli transcriptional regulatory protein ZraR or HydG SWALL:ZRAR_ECOLI (SWALL:P14375) (441 aa) fasta scores: E(): 9.5e-49, 39.66% id in 416 aa, and to Ralstonia solanacearum sigma-54 interacting transcription regulator protein rsc1186 or rs05718 SWALL:Q8Y058 (EMBL:AL646063) (458 aa) fasta scores: E(): 2.2e-77, 50.83% id in 421 aa. Similar to BPSL2474, 58.652% identity (60.277% ungapped) in 445 aa overlap , and to BPSL2475, 55.928% identity (57.208% ungapped) in 447 aa overlap. Possible alternative translational start site; Fis family transcriptional regulator 688552 3094535 BPSL0609 Burkholderia pseudomallei K96243 Fis family transcriptional regulator YP_107238.1 687164 D 272560 CDS YP_107239.1 53718253 3094536 complement(688607..690583) 1 NC_006350.1 Poor database matches. Weakly similar to Agrobacterium tumefaciens hypothetical protein ATU2576 or AGR_C_4666 SWALL:Q8UCC2 (EMBL:AE009203) (619 aa) fasta scores: E(): 9.6e-17, 30.24% id in 625 aa; hypothetical protein 690583 3094536 BPSL0610 Burkholderia pseudomallei K96243 hypothetical protein YP_107239.1 688607 R 272560 CDS YP_107240.1 53718254 3092084 complement(690580..693099) 1 NC_006350.1 Similar to Agrobacterium tumefaciens mannosidase ATU2575 or AGR_C_4665 SWALL:Q8UCC3 (EMBL:AE009203) (818 aa) fasta scores: E(): 1.9e-138, 46.9% id in 823 aa. Weakly similar to Capra hircus beta-mannosidase precursor MANBA SWALL:MANB_CAPHI (SWALL:Q95327) (879 aa) fasta scores: E(): 1.9e-15, 24.54% id in 770 aa; glycosyl hydrolase 693099 3092084 BPSL0611 Burkholderia pseudomallei K96243 glycosyl hydrolase YP_107240.1 690580 R 272560 CDS YP_107241.1 53718255 3092085 complement(693096..694184) 1 NC_006350.1 Similar to Agrobacterium tumefaciens hypothetical protein ATU2574 or AGR_C_4664 SWALL:Q8UCC4 (EMBL:AE009203) (327 aa) fasta scores: E(): 3.4e-48, 43.36% id in 309 aa; hypothetical protein 694184 3092085 BPSL0612 Burkholderia pseudomallei K96243 hypothetical protein YP_107241.1 693096 R 272560 CDS YP_107242.1 53718256 3093544 complement(694181..695155) 1 NC_006350.1 Similar to Agrobacterium tumefaciens hypothetical protein ATU2573 or AGR_C_4663 SWALL:Q8UCC5 (EMBL:AE009203) (327 aa) fasta scores: E(): 8.2e-73, 56.23% id in 313 aa; hypothetical protein 695155 3093544 BPSL0613 Burkholderia pseudomallei K96243 hypothetical protein YP_107242.1 694181 R 272560 CDS YP_107243.1 53718257 3093545 complement(695152..696375) 1 NC_006350.1 Similar to Agrobacterium tumefaciens acyl-CoA dehydrogenase Acd or ATU2572 or AGR_C_4660 SWALL:Q8UCC6 (EMBL:AE009203) (393 aa) fasta scores: E(): 3.7e-73, 50.91% id in 381 aa, and to Clostridium acetobutylicum acyl-CoA dehydrogenase, short-chain specific Bcd or CAC2711 SWALL:ACDS_CLOAB (SWALL:P52042) (379 aa) fasta scores: E(): 1.3e-07, 21.39% id in 374 aa. CDS is extended at the N-terminus in comparison to orthologues; acyl-CoA dehydrogenase 696375 3093545 BPSL0614 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_107243.1 695152 R 272560 CDS YP_107244.1 53718258 3094361 complement(696372..696674) 1 NC_006350.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 696674 3094361 BPSL0615 Burkholderia pseudomallei K96243 acyl carrier protein YP_107244.1 696372 R 272560 CDS YP_107245.1 53718259 3094362 complement(696875..697669) 1 NC_006350.1 Similar to Synechocystis sp. hypothetical protein SLL1169 SWALL:P74198 (EMBL:D90913) (238 aa) fasta scores: E(): 1.4e-22, 34.52% id in 223 aa, and to Rhizobium loti hypothetical protein MLR2110 SWALL:Q98J44 (EMBL:AP002999) (243 aa) fasta scores: E(): 8.4e-11, 28.44% id in 225 aa. Possible alternative translational start site; hypothetical protein 697669 3094362 BPSL0616 Burkholderia pseudomallei K96243 hypothetical protein YP_107245.1 696875 R 272560 CDS YP_107246.1 53718260 3092616 698536..699402 1 NC_006350.1 Similar to Synechocystis sp. hypothetical protein SLL1169 SWALL:P74198 (EMBL:D90913) (238 aa) fasta scores: E(): 5.3e-35, 40.92% id in 237 aa, and to Rhizobium meliloti hypothetical protein ra1066 or sma1948 SWALL:Q92Y22 (EMBL:AE007292) (238 aa) fasta scores: E(): 2.9e-21, 34.07% id in 226 aa. CDS is extended at the C-terminus in comparison to orthologues; hypothetical protein 699402 3092616 BPSL0617 Burkholderia pseudomallei K96243 hypothetical protein YP_107246.1 698536 D 272560 CDS YP_107247.1 53718261 3092617 699399..700817 1 NC_006350.1 Similar to Escherichia coli colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ SWALL:WCAJ_ECOLI (SWALL:P71241) (464 aa) fasta scores: E(): 9.8e-58, 37.08% id in 480 aa, and to Klebsiella pneumoniae probable capsular polysaccharide biosynthesis glycosyltransferase SWALL:YC14_KLEPN (SWALL:Q48460) (465 aa) fasta scores: E(): 8.3e-54, 35.71% id in 476 aa. Similar to BPSS1834, 50.433% identity (50.873% ungapped) in 462 aa overlap; sugar transferase 700817 3092617 BPSL0618 Burkholderia pseudomallei K96243 sugar transferase YP_107247.1 699399 D 272560 CDS YP_107248.1 53718262 3094301 700889..702178 1 NC_006350.1 Similar to Vibrio vulnificus capsular polysaccharide transport protein Wza SWALL:Q938A5 (EMBL:AY055488) (378 aa) fasta scores: E(): 1.4e-22, 33.9% id in 407 aa, and to Ralstonia solanacearum EPSI polysaccharide export outer membrane protein EpsA SWALL:EPA1_RALSO (SWALL:P58597) (381 aa) fasta scores: E(): 1.3e-20, 34.65% id in 404 aa; polysaccharide biosynthesis/export protein 702178 3094301 BPSL0619 Burkholderia pseudomallei K96243 polysaccharide biosynthesis/export protein YP_107248.1 700889 D 272560 CDS YP_107249.1 53718263 3094302 702458..703603 1 NC_006350.1 Similar to Rhizobium meliloti glycosyltransferase rb0655 or smb21076 SWALL:Q92VP4 (EMBL:AL603644) (377 aa) fasta scores: E(): 3.7e-42, 38.85% id in 368 aa, and to Deinococcus radiodurans mannosyltransferase dra0039 SWALL:Q9RZB5 (EMBL:AE001862) (343 aa) fasta scores: E(): 1.5e-29, 37.92% id in 356 aa. Possible alternative translational start site; group 1 glycosyl transferase 703603 3094302 BPSL0620 Burkholderia pseudomallei K96243 group 1 glycosyl transferase YP_107249.1 702458 D 272560 CDS YP_107250.1 53718264 3091729 complement(703632..704531) 1 NC_006350.1 Poor database matches. Internal region is weakly similar to an internal region of Escherichia coli UDP-N-acetylglucosamine--n-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase MurG SWALL:MURG_ECOLI (SWALL:P17443) (354 aa) fasta scores: E(): 2, 27.45% id in 153 aa; hypothetical protein 704531 3091729 BPSL0621 Burkholderia pseudomallei K96243 hypothetical protein YP_107250.1 703632 R 272560 CDS YP_107251.1 53718265 3091730 705249..705683 1 NC_006350.1 Similar to Brucella melitensis hypothetical protein bmei1920 SWALL:Q8YEF8 (EMBL:AE009625) (128 aa) fasta scores: E(): 2.6e-19, 50.82% id in 122 aa, and to Rhizobium loti hypothetical protein mll1617 SWALL:Q98K65 (EMBL:AP002997) (147 aa) fasta scores: E(): 6.6e-18, 50.4% id in 123 aa. CDS is extended at the N-terminus in comparison to B. melitensis protein; hypothetical protein 705683 3091730 BPSL0622 Burkholderia pseudomallei K96243 hypothetical protein YP_107251.1 705249 D 272560 CDS YP_107252.1 53718266 3092112 705775..706740 1 NC_006350.1 Similar to Streptomyces hygroscopicus acetyl-hydrolase Bah SWALL:BAH_STRHY (SWALL:Q01109) (299 aa) fasta scores: E(): 4.6e-39, 47.48% id in 278 aa, and to Ralstonia solanacearum lipase/esterase rsc0439 or rs03408 SWALL:Q8Y297 (EMBL:AL646059) (317 aa) fasta scores: E(): 3.1e-56, 53.18% id in 314 aa. CDS is extended at the N-terminus in comparison to S. hygroscopicus acetyl-hydrolase; hydrolase 706740 3092112 BPSL0623 Burkholderia pseudomallei K96243 hydrolase YP_107252.1 705775 D 272560 CDS YP_107253.1 53718267 3092113 complement(706710..707624) 1 NC_006350.1 Similar to Pseudomonas aeruginosa staphylolytic protease preproenzyme LasA SWALL:P72166 (EMBL:U68175) (263 aa) fasta scores: E(): 1.5e-12, 39.43% id in 284 aa, and to Xanthomonas axonopodis hypothetical protein xac0112 SWALL:AAM35004 (EMBL:AE011634) (263 aa) fasta scores: E(): 8.4e-18, 45.55% id in 281 aa; protease 707624 3092113 BPSL0624 Burkholderia pseudomallei K96243 protease YP_107253.1 706710 R 272560 CDS YP_107254.1 53718268 3094261 707731..709326 1 NC_006350.1 Similar to Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA SWALL:TCMA_STRGA (SWALL:P39886) (538 aa) fasta scores: E(): 1.8e-31, 30.13% id in 511 aa, and to Burkholderia cepacia major facilitator superfamily transporter homologue SWALL:Q9RPH2 (EMBL:AF158699) (531 aa) fasta scores: E(): 4.2e-168, 85.31% id in 531 aa; transport protein 709326 3094261 BPSL0625 Burkholderia pseudomallei K96243 transport protein YP_107254.1 707731 D 272560 CDS YP_107255.1 53718269 3094262 709375..709809 1 NC_006350.1 Similar to Salmonella typhimurium multiple antibiotic resistance protein MarR SWALL:MARR_SALTY (SWALL:Q56069) (144 aa) fasta scores: E(): 0.0021, 31.35% id in 118 aa, and to Burkholderia cepacia MarR homologue SWALL:Q9RPH3 (EMBL:AF158699) (148 aa) fasta scores: E(): 3.1e-46, 81.81% id in 143 aa; MarR family transcriptional regulator 709809 3094262 BPSL0626 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_107255.1 709375 D 272560 CDS YP_107256.1 53718270 3092409 complement(709927..710508) 1 NC_006350.1 Similar to Pyrococcus furiosus protease I PfpI SWALL:PFPI_PYRFU (SWALL:Q51732) (166 aa) fasta scores: E(): 2.3e-10, 33.69% id in 187 aa, and to Burkholderia cepacia hypothetical protein SWALL:Q45084 (EMBL:AF158699) (197 aa) fasta scores: E(): 1.4e-67, 91.19% id in 193 aa; peptidase 710508 3092409 BPSL0627 Burkholderia pseudomallei K96243 peptidase YP_107256.1 709927 R 272560 CDS YP_107257.1 53718271 3092410 complement(710658..711938) 1 NC_006350.1 Similar to Burkholderia cepacia D-serine deaminase Dsd SWALL:Q45085 (EMBL:AF158699) (432 aa) fasta scores: E(): 8.8e-141, 82.39% id in 426 aa, and to Ralstonia solanacearum probable D-serine deaminase rsp1185 or rs03129 SWALL:Q8XQN7 (EMBL:AL646083) (425 aa) fasta scores: E(): 8.3e-112, 66.9% id in 429 aa; hypothetical protein 711938 3092410 BPSL0628 Burkholderia pseudomallei K96243 hypothetical protein YP_107257.1 710658 R 272560 CDS YP_107258.1 53718272 3093819 712076..712969 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp1186 or rs03130 SWALL:Q8XQN6 (EMBL:AL646083) (289 aa) fasta scores: E(): 5.1e-60, 60.62% id in 287 aa. Weakly similar to Escherichia coli als operon repressor protein RpiR SWALL:RPIR_ECOLI (SWALL:P39266) (296 aa) fasta scores: E(): 4.5e-08, 26.31% id in 247 aa; transcriptional regulator 712969 3093819 BPSL0629 Burkholderia pseudomallei K96243 transcriptional regulator YP_107258.1 712076 D 272560 CDS YP_107259.1 53718273 3092434 712971..714452 1 NC_006350.1 Similar to Alcaligenes xylosoxydans xylosoxydans D-aminoacylase Dan SWALL:NDAD_ALCXX (SWALL:P72349) (483 aa) fasta scores: E(): 3.8e-83, 50.95% id in 473 aa, and to Ralstonia solanacearum probable N-acyl-D-glutamate deacylase rsp1187 or rs03131 SWALL:Q8XQN5 (EMBL:AL646083) (494 aa) fasta scores: E(): 2.2e-126, 69.48% id in 485 aa; D-aminoacylase 714452 dan 3092434 dan Burkholderia pseudomallei K96243 D-aminoacylase YP_107259.1 712971 D 272560 CDS YP_107260.1 53718274 3093820 714577..714963 1 NC_006350.1 Similar to Bacillus subtilis regulator of purine biosynthesis YabJ SWALL:YABJ_BACSU (SWALL:P37552) (124 aa) fasta scores: E(): 1.2e-10, 36.52% id in 115 aa, and to Ralstonia solanacearum hypothetical protein rsp1188 or rs03132 SWALL:Q8XQN4 (EMBL:AL646083) (128 aa) fasta scores: E(): 2.9e-35, 70.63% id in 126 aa, and to Homo sapiens 14.5 kDa translational inhibitor protein PSP SWALL:UK14_HUMAN (SWALL:P52758) (137 aa) fasta scores: E(): 9.5e-11, 34.64% id in 127 aa; hypothetical protein 714963 3093820 BPSL0631 Burkholderia pseudomallei K96243 hypothetical protein YP_107260.1 714577 D 272560 CDS YP_107261.1 53718275 3092289 complement(715303..716127) 1 NC_006350.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 716127 queF 3092289 queF Burkholderia pseudomallei K96243 7-cyano-7-deazaguanine reductase YP_107261.1 715303 R 272560 CDS YP_107262.1 53718276 3092379 complement(716147..717670) 1 NC_006350.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 717670 ilvA 3092379 ilvA Burkholderia pseudomallei K96243 threonine dehydratase YP_107262.1 716147 R 272560 CDS YP_107263.1 53718277 3092290 718126..722205 1 NC_006350.1 Similar to Ralstonia solanacearum oxidoreductase rsc0454 or rs04446 SWALL:Q8Y282 (EMBL:AL646059) (1345 aa) fasta scores: E(): 0, 80.81% id in 1355 aa, and to Neisseria meningitidis oxidoreductase, nmb0998 SWALL:Q9JZL6 (EMBL:AE002451) (1277 aa) fasta scores: E(): 3.5e-151, 61.01% id in 1326 aa. Possible alternative translational start site; oxidoreductase 722205 3092290 BPSL0634 Burkholderia pseudomallei K96243 oxidoreductase YP_107263.1 718126 D 272560 CDS YP_107264.1 53718278 3092854 722240..722683 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0455 or rs04445 SWALL:Q8Y281 (EMBL:AL646059) (147 aa) fasta scores: E(): 4.8e-24, 46.76% id in 139 aa, and to Pyrococcus horikoshii hypothetical protein PH1001 SWALL:O58729 (EMBL:AP000004) (150 aa) fasta scores: E(): 3.2e-10, 30.92% id in 152 aa; hypothetical protein 722683 3092854 BPSL0635 Burkholderia pseudomallei K96243 hypothetical protein YP_107264.1 722240 D 272560 CDS YP_107265.1 53718279 3092855 722680..723093 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0457 or rs04443 SWALL:Q8Y279 (EMBL:AL646059) (138 aa) fasta scores: E(): 1.2e-33, 60.87% id in 138 aa, and to Neisseria meningitidis hypothetical protein nma0955 SWALL:Q9JV84 (EMBL:AL162754) (130 aa) fasta scores: E(): 1.9e-20, 55.75% id in 113 aa; hypothetical protein 723093 3092855 BPSL0636 Burkholderia pseudomallei K96243 hypothetical protein YP_107265.1 722680 D 272560 CDS YP_107266.1 53718280 3094697 723141..723872 1 NC_006350.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 723872 ubiE 3094697 ubiE Burkholderia pseudomallei K96243 ubiquinone/menaquinone biosynthesis methyltransferase YP_107266.1 723141 D 272560 CDS YP_107267.1 53718281 3091452 723962..724933 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0459 rsc0459 or rs04440 SWALL:Q8Y277 (EMBL:AL646059) (356 aa) fasta scores: E(): 2.6e-24, 52.13% id in 351 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5528 pa5528 SWALL:Q9HT45 (EMBL:AE004965) (284 aa) fasta scores: E(): 6.7e-07, 35.19% id in 304 aa; hypothetical protein 724933 3091452 BPSL0638 Burkholderia pseudomallei K96243 hypothetical protein YP_107267.1 723962 D 272560 CDS YP_107268.1 53718282 3091453 725014..725688 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0460 or rs04439 SWALL:Q8Y276 (EMBL:AL646059) (203 aa) fasta scores: E(): 4.5e-23, 42.18% id in 211 aa, and to Xanthomonas campestris hypothetical protein xcc0223 SWALL:AAM39542 (EMBL:AE012118) (214 aa) fasta scores: E(): 6.2e-09, 30.94% id in 223 aa; hypothetical protein 725688 3091453 BPSL0639 Burkholderia pseudomallei K96243 hypothetical protein YP_107268.1 725014 D 272560 CDS YP_107269.1 53718283 3093188 725701..727278 1 NC_006350.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 727278 ubiB 3093188 ubiB Burkholderia pseudomallei K96243 ubiquinone biosynthesis protein UbiB YP_107269.1 725701 D 272560 CDS YP_107270.1 53718284 3093189 727602..728243 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0462 or rs04436 SWALL:Q8Y274 (EMBL:AL646059) (209 aa) fasta scores: E(): 3.2e-40, 56.5% id in 200 aa. Weakly similar to Arabidopsis thaliana AT2G43920 protein SWALL:O80562 (EMBL:AC004005) (227 aa) fasta scores: E(): 1.8e-10, 28.3% id in 212 aa. CDS is extended at the N-terminus in comparison to R. solanacearum protein; hypothetical protein 728243 3093189 BPSL0641 Burkholderia pseudomallei K96243 hypothetical protein YP_107270.1 727602 D 272560 CDS YP_107271.1 53718285 3092398 728344..728685 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0464 or rs04433 SWALL:Q8Y272 (EMBL:AL646059) (112 aa) fasta scores: E(): 1.2e-16, 63.96% id in 111 aa, and to Xanthomonas campestris hypothetical protein xcc3033 SWALL:AAM42304 (EMBL:AE012416) (99 aa) fasta scores: E(): 1.7e-07, 43.26% id in 104 aa; hypothetical protein 728685 3092398 BPSL0642 Burkholderia pseudomallei K96243 hypothetical protein YP_107271.1 728344 D 272560 CDS YP_107272.1 53718286 3092399 728756..729403 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0465 or rs04432 SWALL:Q8Y271 (EMBL:AL646059) (243 aa) fasta scores: E(): 9.8e-58, 74.17% id in 213 aa, and to Neisseria meningitidis hypothetical protein nmb0465 SWALL:Q9K0U6 (EMBL:AE002403) (233 aa) fasta scores: E(): 2.3e-32, 45.91% id in 196 aa; hypothetical protein 729403 3092399 BPSL0643 Burkholderia pseudomallei K96243 hypothetical protein YP_107272.1 728756 D 272560 CDS YP_107273.1 53718287 3092849 729466..731262 1 NC_006350.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 731262 aspS 3092849 aspS Burkholderia pseudomallei K96243 aspartyl-tRNA synthetase YP_107273.1 729466 D 272560 CDS YP_107274.1 53718288 3094352 731470..731946 1 NC_006350.1 converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 731946 ntpA 3094352 ntpA Burkholderia pseudomallei K96243 dATP pyrophosphohydrolase YP_107274.1 731470 D 272560 CDS YP_107275.1 53718289 3094353 731943..733217 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0470 or rs04425 SWALL:Q8Y266 (EMBL:AL646059) (422 aa) fasta scores: E(): 6e-52, 45.25% id in 400 aa, and to the C-terminal region of Bacillus firmus cardiolipin synthetase Cls SWALL:CLS_BACFI (SWALL:O66043) (503 aa) fasta scores: E(): 2.2e-10, 28.32% id in 413 aa; phospholipase 733217 3094353 BPSL0646 Burkholderia pseudomallei K96243 phospholipase YP_107275.1 731943 D 272560 CDS YP_107276.1 53718290 3091725 733407..734006 1 NC_006350.1 Similar to Ralstonia solanacearum transcription regulator protein rsc0472 or rs04423 SWALL:Q8Y264 (EMBL:AL646059) (213 aa) fasta scores: E(): 7.8e-60, 76.02% id in 196 aa, and to Agrobacterium tumefaciens transcriptional regulator, TetR family ATU5291 or AGR_PAT_419 SWALL:Q8UK32 (EMBL:AE008951) (221 aa) fasta scores: E(): 1.3e-14, 32.99% id in 194 aa. R. solanacearum protein is extended at the N-terminus in comparison to CDS; TetR family regulatory protein 734006 3091725 BPSL0647 Burkholderia pseudomallei K96243 TetR family regulatory protein YP_107276.1 733407 D 272560 CDS YP_107277.1 53718291 3091726 734064..735851 1 NC_006350.1 Similar to Ralstonia solanacearum acyl-CoA dehydrogenase oxidoreductase rsc0473 or rs04422 SWALL:Q8Y263 (EMBL:AL646059) (595 aa) fasta scores: E(): 1.3e-205, 81.51% id in 595 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase PA0506 SWALL:Q9I612 (EMBL:AE004487) (601 aa) fasta scores: E(): 1.3e-147, 61.2% id in 598 aa; acyl-CoA dehydrogenase oxidoreductase 735851 3091726 BPSL0648 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase oxidoreductase YP_107277.1 734064 D 272560 CDS YP_107278.1 53718292 3094624 736009..738444 1 NC_006350.1 Similar to Ralstonia solanacearum 3-hydroxyacyl-CoA dehydrogenase oxidoreductase rsc0474 or rs04421 SWALL:Q8Y262 (EMBL:AL646059) (827 aa) fasta scores: E(): 0, 77.28% id in 810 aa. N-terminal region and to Homo sapiens short chain 3-hydroxyacyl-CoA dehydrogenase, mitochondrial precursor HADHSC or SCHAD SWALL:HCDH_HUMAN (SWALL:Q16836) (314 aa) fasta scores: E(): 1.6e-20, 34.57% id in 295 aa. R. solanacearum protein is extended at the N-terminus in comparison to CDS; 3-hydroxyacyl-CoA dehydrogenase oxidoreductase 738444 3094624 BPSL0649 Burkholderia pseudomallei K96243 3-hydroxyacyl-CoA dehydrogenase oxidoreductase YP_107278.1 736009 D 272560 CDS YP_107279.1 53718293 3094625 738624..739823 1 NC_006350.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 739823 3094625 BPSL0650 Burkholderia pseudomallei K96243 acetyl-CoA acetyltransferase YP_107279.1 738624 D 272560 CDS YP_107280.1 53718294 3091688 739918..740682 1 NC_006350.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 740682 3091688 BPSL0651 Burkholderia pseudomallei K96243 enoyl-CoA hydratase YP_107280.1 739918 D 272560 CDS YP_107281.1 53718295 3091689 complement(740796..741620) 1 NC_006350.1 Similar to Alcaligenes eutrophus fdhD protein FdhD or FdsC SWALL:FDHD_ALCEU (SWALL:O87816) (288 aa) fasta scores: E(): 6e-39, 48.12% id in 266 aa, and to Ralstonia solanacearum probable formate dehydrogenase associated protein rsp1050 or rs02387 SWALL:Q8XR18 (EMBL:AL646082) (273 aa) fasta scores: E(): 2.5e-41, 49.62% id in 266 aa; formate dehydrogenase subunit delta 741620 3091689 BPSL0652 Burkholderia pseudomallei K96243 formate dehydrogenase subunit delta YP_107281.1 740796 R 272560 CDS YP_107282.1 53718296 3092116 741755..742234 1 NC_006350.1 Similar to Anabaena sp. hypothetical protein ALR0614 SWALL:Q8YZ73 (EMBL:AP003583) (153 aa) fasta scores: E(): 3.5e-11, 29.53% id in 149 aa, and to Synechocystis sp. hypothetical protein SLL1455 SWALL:P73447 (EMBL:D90906) (155 aa) fasta scores: E(): 8e-10, 28.75% id in 153 aa; hypothetical protein 742234 3092116 BPSL0653 Burkholderia pseudomallei K96243 hypothetical protein YP_107282.1 741755 D 272560 CDS YP_107283.1 53718297 3092117 complement(742279..742692) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0477 or rs04418 SWALL:Q8Y259 (EMBL:AL646059) (139 aa) fasta scores: E(): 2.3e-34, 78.12% id in 128 aa, and to Escherichia coli acyl-CoA thioester hydrolase YciA or b1253 SWALL:YCIA_ECOLI (SWALL:P04379) (132 aa) fasta scores: E(): 1.3e-16, 43.54% id in 124 aa; thioesterase superfamily protein 742692 3092117 BPSL0654 Burkholderia pseudomallei K96243 thioesterase superfamily protein YP_107283.1 742279 R 272560 CDS YP_107284.1 53718298 3092132 742999..744870 1 NC_006350.1 Similar to the C-terminal region of Homo sapiens ATP-binding cassette transporter 7, mitochondrial precursor ABCB7 or ABC7 SWALL:ABC7_HUMAN (SWALL:O75027) (752 aa) fasta scores: E(): 6.1e-95, 47.55% id in 614 aa, and to the full length Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc0478 or rs04417 SWALL:Q8Y258 (EMBL:AL646059) (592 aa) fasta scores: E(): 6.9e-141, 73.98% id in 592 aa. Similar to BPSS2259, 51.007% identity (53.427% ungapped) in 596 aa overlap. CDS is extended at the N-terminus in comparison to R. solanacearum protein; ATP-binding transmembrane ABC transporter protein 744870 3092132 BPSL0655 Burkholderia pseudomallei K96243 ATP-binding transmembrane ABC transporter protein YP_107284.1 742999 D 272560 CDS YP_107285.1 53718299 3092133 complement(745363..746082) 1 NC_006350.1 Similar to Ralstonia solanacearum mannose-1-phosphate guanyltransferase-related protein rsc0511 or rs04996 SWALL:Q8Y225 (EMBL:AL646059) (241 aa) fasta scores: E(): 3.2e-58, 70.08% id in 234 aaWeakly similar to Streptomyces griseus glucose-1-phosphate thymidylyltransferase StrD SWALL:STRD_STRGR (SWALL:P08075) (355 aa) fasta scores: E(): 9.8e-09, 26.16% id in 237 aa; nucleotidyl transferase 746082 3092133 BPSL0656 Burkholderia pseudomallei K96243 nucleotidyl transferase YP_107285.1 745363 R 272560 CDS YP_107286.1 53718300 3091651 complement(746086..747120) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0514 or rs04986 SWALL:Q8Y222 (EMBL:AL646059) (352 aa) fasta scores: E(): 3.9e-76, 59.3% id in 344 aa, and to Pseudomonas aeruginosa hypothetical protein SWALL:Q9X4N9 (EMBL:AF116284) (338 aa) fasta scores: E(): 1.5e-56, 47.23% id in 343 aa; hypothetical protein 747120 3091651 BPSL0657 Burkholderia pseudomallei K96243 hypothetical protein YP_107286.1 746086 R 272560 CDS YP_107287.1 53718301 3091652 747333..749696 1 NC_006350.1 Similar to Ralstonia solanacearum probable organic solvent tolerance transmembrane protein rsc0515 or rs04980 SWALL:Q8Y221 (EMBL:AL646059) (811 aa) fasta scores: E(): 1.7e-126, 43.28% id in 811 aa. Weakly similar to Escherichia coli organic solvent tolerance protein precursor Imp or OstA SWALL:OSTA_ECOLI (SWALL:P31554) (784 aa) fasta scores: E(): 6.6e-18, 28.08% id in 794 aa; hypothetical protein 749696 3091652 BPSL0658 Burkholderia pseudomallei K96243 hypothetical protein YP_107287.1 747333 D 272560 CDS YP_107288.1 53718302 3094814 749757..751109 1 NC_006350.1 Similar to Escherichia coli survival protein (peptidyl-prolyl cis-trans isomerase) SurA SWALL:SURA_ECOLI (SWALL:P21202) (428 aa) fasta scores: E(): 2.1e-35, 32.93% id in 413 aa, and to Ralstonia solanacearum probable peptidyl-prolyl cis-trans isomerase rsc0516 or rs04977 SWALL:Q8Y220 (EMBL:AL646059) (498 aa) fasta scores: E(): 8.2e-61, 44.49% id in 427 aa. R. solanacearum is extended at the N-terminus in comparison to CDS; peptidyl-prolyl cis-trans isomerase 751109 3094814 BPSL0659 Burkholderia pseudomallei K96243 peptidyl-prolyl cis-trans isomerase YP_107288.1 749757 D 272560 CDS YP_107289.1 53718303 3094225 751131..752180 1 NC_006350.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 752180 pdxA 3094225 pdxA Burkholderia pseudomallei K96243 4-hydroxythreonine-4-phosphate dehydrogenase YP_107289.1 751131 D 272560 CDS YP_107290.1 53718304 3091449 752212..753039 1 NC_006350.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 753039 ksgA 3091449 ksgA Burkholderia pseudomallei K96243 dimethyladenosine transferase YP_107290.1 752212 D 272560 CDS YP_107291.1 53718305 3094815 complement(753301..754239) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0519 or rs04969 SWALL:Q8Y218 (EMBL:AL646059) (301 aa) fasta scores: E(): 2.8e-62, 60.59% id in 302 aa, and to Pseudomonas aeruginosa hypothetical protein pa1411 SWALL:Q9I3T3 (EMBL:AE004570) (303 aa) fasta scores: E(): 2.2e-47, 51.86% id in 295 aa; hypothetical protein 754239 3094815 BPSL0662 Burkholderia pseudomallei K96243 hypothetical protein YP_107291.1 753301 R 272560 CDS YP_107292.1 53718306 3092375 754617..755006 1 NC_006350.1 Similar to Neisseria meningitidis lactoylglutathione lyase GloA SWALL:LGUL_NEIMA (SWALL:O33393) (138 aa) fasta scores: E(): 1.4e-39, 75% id in 128 aa, and to Pseudomonas aeruginosa lactoylglutathione lyase PA3524 SWALL:Q9HY85 (EMBL:AE004773) (128 aa) fasta scores: E(): 6.3e-38, 71.87% id in 128 aa; lactoylglutathione lyase 755006 gloA 3092375 gloA Burkholderia pseudomallei K96243 lactoylglutathione lyase YP_107292.1 754617 D 272560 CDS YP_107293.1 53718307 3093196 complement(755219..756064) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0521 or rs06095 SWALL:Q8Y216 (EMBL:AL646059) (288 aa) fasta scores: E(): 1.7e-59, 65.7% id in 277 aa, and to the C-terminal region of Agrobacterium tumefaciens hypothetical protein ATU0016 or AGR_C_25 SWALL:Q8UJB2 (EMBL:AE008976) (255 aa) fasta scores: E(): 1.5e-12, 29.36% id in 252 aa. CDS is extended at the N-terminus in comparison to many orthologues; hypothetical protein 756064 3093196 BPSL0664 Burkholderia pseudomallei K96243 hypothetical protein YP_107293.1 755219 R 272560 CDS YP_107294.1 53718308 3093197 complement(756145..756924) 1 NC_006350.1 Similar to Ralstonia solanacearum acyltransferase transmembrane protein rsc0522 or rs04959 SWALL:Q8Y215 (EMBL:AL646059) (250 aa) fasta scores: E(): 9.8e-67, 65.59% id in 250 aa, and to Pseudomonas aeruginosa probable acyltransferase pa0005 SWALL:Q9I7C1 (EMBL:AE004440) (257 aa) fasta scores: E(): 6.3e-40, 43.8% id in 242 aa, and to Pseudomonas fluorescens N-acylhomoserine lactone synthase HdtS SWALL:Q9F728 (EMBL:AF286536) (259 aa) fasta scores: E(): 3.2e-37, 40.58% id in 239 aa; acyltransferase 756924 3093197 BPSL0665 Burkholderia pseudomallei K96243 acyltransferase YP_107294.1 756145 R 272560 CDS YP_107295.1 53718309 3092787 complement(756967..757530) 1 NC_006350.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 757530 3092787 BPSL0666 Burkholderia pseudomallei K96243 D,D-heptose 1,7-bisphosphate phosphatase YP_107295.1 756967 R 272560 CDS YP_107296.1 53718310 3092164 complement(757548..759647) 1 NC_006350.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 759647 glyS 3092164 glyS Burkholderia pseudomallei K96243 glycyl-tRNA synthetase subunit beta YP_107296.1 757548 R 272560 CDS YP_107297.1 53718311 3094758 complement(759664..760671) 1 NC_006350.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 760671 glyQ 3094758 glyQ Burkholderia pseudomallei K96243 glycyl-tRNA synthetase subunit alpha YP_107297.1 759664 R 272560 CDS YP_107298.1 53718312 3092788 complement(760927..762633) 1 NC_006350.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 762633 lnt 3092788 lnt Burkholderia pseudomallei K96243 apolipoprotein N-acyltransferase YP_107298.1 760927 R 272560 CDS YP_107299.1 53718313 3093851 complement(762676..763563) 1 NC_006350.1 Similar to Salmonella typhimurium, and Salmonella typhi magnesium and cobalt efflux protein CorC or stm0667 or sty0712 SWALL:CORC_SALTY (SWALL:Q9R874) (292 aa) fasta scores: E(): 9.1e-41, 42.9% id in 289 aa, and to Ralstonia solanacearum hypothetical protein rsc0528 or rs04940 SWALL:Q8Y209 (EMBL:AL646059) (298 aa) fasta scores: E(): 1e-83, 77.43% id in 288 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3983 pa3983 SWALL:Q9HX36 (EMBL:AE004816) (279 aa) fasta scores: E(): 2.4e-53, 53.02% id in 281 aa; cation transporter efflux protein 763563 3093851 BPSL0670 Burkholderia pseudomallei K96243 cation transporter efflux protein YP_107299.1 762676 R 272560 CDS YP_107300.1 53718314 3093852 complement(764076..764708) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0782 or rs05056 SWALL:Q8Y1A8 (EMBL:AL646061) (248 aa) fasta scores: E(): 8.4e-32, 47.8% id in 205 aa; limited homology to cation transporters; hypothetical protein 764708 3093852 BPSL0671 Burkholderia pseudomallei K96243 hypothetical protein YP_107300.1 764076 R 272560 CDS YP_107301.2 229269498 3093081 complement(764729..765541) 1 NC_006350.1 contains unknown N-terminal domain/ metalloprotease C-terminal domain; unkown domain/ metalloprotease fusion protein 765541 3093081 BPSL0672 Burkholderia pseudomallei K96243 unkown domain/ metalloprotease fusion protein YP_107301.2 764729 R 272560 CDS YP_107302.1 53718316 3093082 complement(766175..767239) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 phoH-like protein ybeZ or b0660 or z0809 or ecs0698 SWALL:PHOL_ECOLI (SWALL:P77349) (359 aa) fasta scores: E(): 1.3e-51, 53.46% id in 346 aa, and to Ralstonia solanacearum probable phoH-like protein rsc0530 or rs04938 SWALL:Q8Y207 (EMBL:AL646059) (325 aa) fasta scores: E(): 7.4e-72, 74.93% id in 355 aa, and to Neisseria meningitidis hypothetical protein Nma1056 nma1056 SWALL:Q9JV06 (EMBL:AL162755) (317 aa) fasta scores: E(): 1.7e-53, 54.14% id in 338 aa; PhoH-family protein 767239 3093082 BPSL0673 Burkholderia pseudomallei K96243 PhoH-family protein YP_107302.1 766175 R 272560 CDS YP_107303.1 53718317 3093127 complement(767263..768636) 1 NC_006350.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 768636 miaB 3093127 miaB Burkholderia pseudomallei K96243 (dimethylallyl)adenosine tRNA methylthiotransferase YP_107303.1 767263 R 272560 CDS YP_107304.1 53718318 3092721 complement(769122..770054) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3565 SWALL:Q9HY52 (EMBL:AE004777) (306 aa) fasta scores: E(): 9.4e-41, 40.41% id in 287 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0997 or rs02329 SWALL:Q8XR64 (EMBL:AL646082) (306 aa) fasta scores: E(): 3.7e-38, 37.71% id in 289 aa, and to Vibrio cholerae transcriptional regulator, lysR family vca0635 SWALL:Q9KLV6 (EMBL:AE004393) (313 aa) fasta scores: E(): 9e-35, 35.93% id in 295 aa; LysR family transcriptional regulator 770054 3092721 BPSL0675 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107304.1 769122 R 272560 CDS YP_107305.1 53718319 3092722 770200..771372 1 NC_006350.1 Similar to Streptomyces coelicolor transmembrane efflux protein sco3915 or sch24.37 SWALL:Q9X8V1 (EMBL:AL049826) (404 aa) fasta scores: E(): 8.4e-76, 57.58% id in 389 aa, and to Pseudomonas aeruginosa probable MFS transporter pa4355 SWALL:Q9HW46 (EMBL:AE004851) (388 aa) fasta scores: E(): 1.1e-73, 56.18% id in 388 aa, and to Rhizobium loti transmembrane efflux protein mlr2770 SWALL:Q98HP8 (EMBL:AP003000) (391 aa) fasta scores: E(): 4.7e-73, 56.12% id in 392 aa; transmembrane transporter protein 771372 3092722 BPSL0676 Burkholderia pseudomallei K96243 transmembrane transporter protein YP_107305.1 770200 D 272560 CDS YP_107306.1 53718320 3094245 771506..772174 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2312 SWALL:Q9I1G3 (EMBL:AE004657) (193 aa) fasta scores: E(): 4.4e-32, 56.98% id in 186 aa, and to Streptomyces coelicolor transcriptional regulatory protein sco1312 or scbac36f5.23C SWALL:Q93IV8 (EMBL:AL592292) (201 aa) fasta scores: E(): 1.2e-11, 34.37% id in 192 aa, and to Bacillus halodurans hypothetical protein Bh2909 bh2909 SWALL:Q9K8U3 (EMBL:AP001517) (189 aa) fasta scores: E(): 2.4e-10, 31.18% id in 186 aa; DNA binding protein 772174 3094245 BPSL0677 Burkholderia pseudomallei K96243 DNA binding protein YP_107306.1 771506 D 272560 CDS YP_107307.1 53718321 3092772 772598..773320 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 3,4-dihydroxy-2-butanone 4-phosphate synthase ribB or htrP or b3041 or z4399 or ecs3929 SWALL:RIBB_ECOLI (SWALL:P24199) (217 aa) fasta scores: E(): 7.7e-44, 61.03% id in 213 aa, and to Ralstonia solanacearum probable 3,4-dihydroxy-2-butanone 4-phosphate synthase ribB or rsp1191 or rs04751 SWALL:Q8XQN1 (EMBL:AL646083) (227 aa) fasta scores: E(): 1.9e-50, 65.47% id in 223 aa, and to Vibrio cholerae 3,4-dihydroxy-2-butanone 4-phosphate synthase vca1060 SWALL:Q9KKP2 (EMBL:AE004431) (218 aa) fasta scores: E(): 2.8e-45, 63.5% id in 200 aa; 3,4-dihydroxy-2-butanone 4-phosphate synthase 773320 ribB 3092772 ribB Burkholderia pseudomallei K96243 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_107307.1 772598 D 272560 CDS YP_107308.1 53718322 3094246 complement(773388..774074) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable hydrolase pa0562 SWALL:Q9I5X4 (EMBL:AE004492) (224 aa) fasta scores: E(): 9.9e-33, 49.06% id in 214 aa, and to Xanthomonas campestris hydrolase xcc2720 SWALL:AAM41992 (EMBL:AE012385) (225 aa) fasta scores: E(): 1.8e-32, 49.52% id in 212 aa, and to Xanthomonas axonopodis hydrolase xac2883 SWALL:AAM37728 (EMBL:AE011930) (225 aa) fasta scores: E(): 2.3e-32, 48.57% id in 210 aa; hydrolase 774074 3094246 BPSL0679 Burkholderia pseudomallei K96243 hydrolase YP_107308.1 773388 R 272560 CDS YP_107309.1 53718323 3093650 complement(774204..775058) 1 NC_006350.1 Similar to Deinococcus radiodurans hypothetical protein Dr2437 SWALL:Q9RRQ1 (EMBL:AE002073) (278 aa) fasta scores: E(): 3.9e-10, 29.85% id in 278 aa, and to Streptomyces coelicolor integral membrane protein sco1313 or scbac36f5.24 SWALL:Q93IV7 (EMBL:AL592292) (285 aa) fasta scores: E(): 1.3e-07, 27.91% id in 283 aa; hypothetical protein 775058 3093650 BPSL0680 Burkholderia pseudomallei K96243 hypothetical protein YP_107309.1 774204 R 272560 CDS YP_107310.1 53718324 3093651 complement(775147..776373) 1 NC_006350.1 Similar to Streptomyces coelicolor hypothetical protein Sco0993 or 2scg2.06 SWALL:Q9EX45 (EMBL:AL445963) (412 aa) fasta scores: E(): 6.2e-16, 28.35% id in 402 aa, and to Rhizobium loti fusion protein contains ligase and probable arginosuccinate lyase msi203 SWALL:CAD31608 (EMBL:AL672113) (899 aa) fasta scores: E(): 1e-15, 26.36% id in 421 aa, and to Rhizobium loti hypothetical protein Mll5963 mll5963 SWALL:Q98AK8 (EMBL:AP003008) (408 aa) fasta scores: E(): 1.4e-15, 28.3% id in 325 aa; hypothetical protein 776373 3093651 BPSL0681 Burkholderia pseudomallei K96243 hypothetical protein YP_107310.1 775147 R 272560 CDS YP_107311.1 53718325 3094477 complement(776411..777943) 1 NC_006350.1 glutamine-hydrolyzing; Similar to Escherichia coli asparagine synthetase B [glutamine-hydrolyzing] asnB or b0674 SWALL:ASNB_ECOLI (SWALL:P22106) (553 aa) fasta scores: E(): 7.9e-21, 32.63% id in 524 aa, and to Lactococcus lactis asparagine synthetase B asnB or ll0352 SWALL:Q9CIK5 (EMBL:AE006272) (530 aa) fasta scores: E(): 4.7e-30, 30.04% id in 476 aa, and to Caenorhabditis elegans M02d8.4 protein m02d8.4 SWALL:Q21463 (EMBL:U41034) (567 aa) fasta scores: E(): 6e-28, 30.66% id in 525 aa; asparagine synthetase B 777943 3094477 BPSL0682 Burkholderia pseudomallei K96243 asparagine synthetase B YP_107311.1 776411 R 272560 CDS YP_107312.1 53718326 3094478 complement(777987..779342) 1 NC_006350.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 779342 3094478 BPSL0683 Burkholderia pseudomallei K96243 3-phosphoshikimate 1-carboxyvinyltransferase YP_107312.1 777987 R 272560 CDS YP_107313.1 53718327 3093000 complement(779381..780688) 1 NC_006350.1 Similar to Pseudomonas sp. 3-phosphoshikimate 1-carboxyvinyltransferase aroA SWALL:AROA_PSES2 (SWALL:P56952) (449 aa) fasta scores: E(): 6.6e-08, 22.39% id in 460 aa, and to Methanosarcina mazei 3-phosphoshikimate 1-carboxyvinyltransferase mm1238 SWALL:AAM30934 (EMBL:AE013354) (430 aa) fasta scores: E(): 2.8e-14, 24.88% id in 442 aa, and to Methanosarcina acetivorans 3-phosphoshikimate 1-carboxyvinyltransferase aroa or ma4544 SWALL:Q8THH3 (EMBL:AE011175) (430 aa) fasta scores: E(): 2.9e-13, 25.57% id in 438 aa; 3-phosphoskimimate 1-carboxyvinyltransferase 780688 3093000 BPSL0684 Burkholderia pseudomallei K96243 3-phosphoskimimate 1-carboxyvinyltransferase YP_107313.1 779381 R 272560 CDS YP_107314.1 53718328 3093001 complement(780710..781132) 1 NC_006350.1 Similar to Deinococcus radiodurans hypothetical protein Dr0033 SWALL:Q9RYB7 (EMBL:AE001867) (157 aa) fasta scores: E(): 5.1e-13, 41.6% id in 125 aa, and to Mycobacterium tuberculosis hypothetical protein Rv2704 rv2704 or mtcy05a6.25 or mt2777.1 SWALL:O07205 (EMBL:Z96072) (142 aa) fasta scores: E(): 1.4e-07, 35.93% id in 128 aa, and to Streptomyces coelicolor hypothetical protein sco2049 or sc4g6.18C SWALL:YK49_STRCO (SWALL:P16251) (134 aa) fasta scores: E(): 1.8e-07, 31.78% id in 129 aa; hypothetical protein 781132 3093001 BPSL0685 Burkholderia pseudomallei K96243 hypothetical protein YP_107314.1 780710 R 272560 CDS YP_107315.1 53718329 3093044 complement(782049..782765) 1 NC_006350.1 Similar to Thermus aquaticus glycerol facilitator glpF SWALL:Q93RA7 (EMBL:AB053202) (272 aa) fasta scores: E(): 7e-43, 50.64% id in 231 aa, and to Thermotoga maritima probable glycerol uptake facilitator protein GlpF or tm1429 SWALL:GLPF_THEMA (SWALL:Q9X1E3) (234 aa) fasta scores: E(): 1.1e-50, 56.83% id in 234 aa, and to Thermoanaerobacter tengcongensis glycerol uptake facilitator and related permeases GlpF or tte2003 SWALL:Q8R5R1 (EMBL:AE013151) (242 aa) fasta scores: E(): 2.3e-45, 52.11% id in 236 aa; glycerol uptake facilitator protein 782765 glpF 3093044 glpF Burkholderia pseudomallei K96243 glycerol uptake facilitator protein YP_107315.1 782049 R 272560 CDS YP_107316.1 53718330 3092942 complement(782878..784380) 1 NC_006350.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 784380 glpK 3092942 glpK Burkholderia pseudomallei K96243 glycerol kinase YP_107316.1 782878 R 272560 CDS YP_107317.1 53718331 3093043 complement(784486..786018) 1 NC_006350.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 786018 glpD 3093043 glpD Burkholderia pseudomallei K96243 glycerol-3-phosphate dehydrogenase YP_107317.1 784486 R 272560 CDS YP_107318.1 53718332 3094507 786186..786557 1 NC_006350.1 hypothetical protein 786557 3094507 BPSL0689 Burkholderia pseudomallei K96243 hypothetical protein YP_107318.1 786186 D 272560 CDS YP_107319.1 53718333 3094508 complement(786624..786833) 1 NC_006350.1 hypothetical protein 786833 3094508 BPSL0690 Burkholderia pseudomallei K96243 hypothetical protein YP_107319.1 786624 R 272560 CDS YP_107320.1 53718334 3092943 complement(787140..787976) 1 NC_006350.1 Similar to Pseudomonas aeruginosa glycerol-3-phosphate regulon repressor GlpR or pa3583 SWALL:GLPR_PSEAE (SWALL:Q51391) (251 aa) fasta scores: E(): 7.8e-46, 52.45% id in 244 aa, and to Xanthomonas axonopodis glycerol-3-phosphate regulon repressor GlpR or xac0361 SWALL:AAM35253 (EMBL:AE011662) (256 aa) fasta scores: E(): 1.1e-53, 58.16% id in 251 aa, and to Xanthomonas campestris glycerol-3-phosphate regulon repressor glpR or xcc0361 SWALL:AAM39680 (EMBL:AE012132) (259 aa) fasta scores: E(): 9.5e-53, 56.29% id in 254 aa; DeoR family glycerol-3-phosphate regulon repressor 787976 glpR 3092943 glpR Burkholderia pseudomallei K96243 DeoR family glycerol-3-phosphate regulon repressor YP_107320.1 787140 R 272560 CDS YP_107321.1 53718335 3091752 788147..789820 1 NC_006350.1 Similar to Ralstonia solanacearum gamma-glutamyltranspeptidase rsc2501 or rs01094 SWALL:Q8XWH3 (EMBL:AL646070) (552 aa) fasta scores: E(): 8.6e-156, 70.73% id in 557 aa, and to Deinococcus radiodurans cephalosporin acylase dr1524 SWALL:Q9RU70 (EMBL:AE001996) (535 aa) fasta scores: E(): 5.2e-90, 50.64% id in 547 aa, and to Bacillus halodurans cephalosporin acylase bh0867 SWALL:Q9KEI5 (EMBL:AP001510) (539 aa) fasta scores: E(): 3.7e-89, 49.36% id in 547 aa; possible alternative start site at codon 4; gamma-glutamyltransferase 2 789820 3091752 BPSL0692 Burkholderia pseudomallei K96243 gamma-glutamyltransferase 2 YP_107321.1 788147 D 272560 CDS YP_107322.1 53718336 3091753 790123..790956 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc3135 or rs00468 SWALL:Q8XUQ1 (EMBL:AL646073) (284 aa) fasta scores: E(): 1.8e-54, 52.19% id in 274 aa; hypothetical protein 790956 3091753 BPSL0693 Burkholderia pseudomallei K96243 hypothetical protein YP_107322.1 790123 D 272560 CDS YP_107323.1 53718337 3092944 791026..791526 1 NC_006350.1 hypothetical protein 791526 3092944 BPSL0694 Burkholderia pseudomallei K96243 hypothetical protein YP_107323.1 791026 D 272560 CDS YP_107324.1 53718338 3093147 complement(791664..793121) 1 NC_006350.1 Similar to Escherichia coli ATP-dependent RNA helicase RhlE or b0797 SWALL:RHLE_ECOLI (SWALL:P25888) (454 aa) fasta scores: E(): 7.1e-85, 64.73% id in 465 aa, and to Ralstonia solanacearum probable ATP-dependent RNA helicase rhlE1 or rsc0539 or rs06096 SWALL:Q8Y1Z8 (EMBL:AL646059) (540 aa) fasta scores: E(): 3.1e-97, 68.07% id in 498 aa; ATP-dependent RNA helicase 1 793121 rhlE1 3093147 rhlE1 Burkholderia pseudomallei K96243 ATP-dependent RNA helicase 1 YP_107324.1 791664 R 272560 CDS YP_107325.1 53718339 3092945 complement(793249..794547) 1 NC_006350.1 Similar to Acetobacter europaeus cytochrome c precursor AldF SWALL:O30327 (EMBL:Y08696) (444 aa) fasta scores: E(): 1.9e-44, 36.43% id in 398 aa, and to Pseudomonas aeruginosa probable c-type cytochrome pa4619 SWALL:Q9HVH2 (EMBL:AE004876) (415 aa) fasta scores: E(): 2.9e-55, 39.57% id in 427 aa, and to Pseudomonas aeruginosa probable cytochrome c pa4571 SWALL:Q9HVL3 (EMBL:AE004870) (675 aa) fasta scores: E(): 1.9e-49, 38.69% id in 398 aa; periplasmic cytochrome c containing protein 794547 3092945 BPSL0696 Burkholderia pseudomallei K96243 periplasmic cytochrome c containing protein YP_107325.1 793249 R 272560 CDS YP_107326.1 53718340 3092201 complement(794567..795328) 1 NC_006350.1 Similar to Thiobacillus ferrooxidans cytochrome c-552 precursor Cyc1 SWALL:C552_THIFE (SWALL:P74917) (230 aa) fasta scores: E(): 3.5e-07, 26.63% id in 229 aa, and to Pseudomonas aeruginosa probable cytochrome c pa2482 SWALL:Q9I100 (EMBL:AE004676) (217 aa) fasta scores: E(): 3.4e-15, 37.05% id in 170 aa, and to Ralstonia solanacearum cytochrome c signal peptide protein rsc0197 or rs00629 SWALL:Q8Y2Y4 (EMBL:AL646058) (206 aa) fasta scores: E(): 6.3e-14, 37.71% id in 175 aa; periplasmic cytochrome c protein 795328 3092201 BPSL0697 Burkholderia pseudomallei K96243 periplasmic cytochrome c protein YP_107326.1 794567 R 272560 CDS YP_107327.1 53718341 3092202 795753..796679 1 NC_006350.1 Similar to Pseudomonas syringae copper resistance protein D copD SWALL:COPD_PSESF (SWALL:Q9KWM8) (311 aa) fasta scores: E(): 1.7e-06, 30.41% id in 263 aa, and to Ralstonia solanacearum probable copper resistance D transmembrane protein copD or rsp0659 or rs01790 SWALL:Q8XS22 (EMBL:AL646080) (309 aa) fasta scores: E(): 4.6e-08, 31.69% id in 306 aa, and to Xanthomonas campestris juglandis copper-resistance genes SWALL:Q56798 (EMBL:L19222) (307 aa) fasta scores: E(): 1.2e-06, 28.62% id in 283 aa; transmembrane transporter protein 796679 3092202 BPSL0698 Burkholderia pseudomallei K96243 transmembrane transporter protein YP_107327.1 795753 D 272560 CDS YP_107328.1 53718342 3093666 complement(797270..798418) 1 NC_006350.1 Similar to Rhizobium meliloti probable galactonate dehydratase dgoA or rb0492 or smb20510 SWALL:Q92W53 (EMBL:AL603643) (382 aa) fasta scores: E(): 3.3e-125, 78.27% id in 382 aa, and to Ralstonia solanacearum galactonate dehydratase dgoAB or rsc2751 or rs00103 SWALL:Q8XVS8 (EMBL:AL646071) (382 aa) fasta scores: E(): 4e-101, 64.92% id in 382 aa; galactonate dehydratase 798418 3093666 BPSL0699 Burkholderia pseudomallei K96243 galactonate dehydratase YP_107328.1 797270 R 272560 CDS YP_107329.1 53718343 3093667 798874..799221 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc3305 or rs02534 SWALL:Q8XU88 (EMBL:AL646074) (115 aa) fasta scores: E(): 4.9e-32, 63.15% id in 114 aa, and to Agrobacterium tumefaciens hypothetical protein atu2404 atu2404 or agr_c_4363 SWALL:Q8UCS9 (EMBL:AE009188) (118 aa) fasta scores: E(): 5e-21, 50.89% id in 112 aa, and to Xanthomonas axonopodis hypothetical protein Xac2795 xac2795 SWALL:AAM37640 (EMBL:AE011920) (132 aa) fasta scores: E(): 3.8e-19, 47.82% id in 115 aa; hypothetical protein 799221 3093667 BPSL0700 Burkholderia pseudomallei K96243 hypothetical protein YP_107329.1 798874 D 272560 CDS YP_107330.1 53718344 3094054 complement(799353..799808) 1 NC_006350.1 hypothetical protein 799808 3094054 BPSL0701 Burkholderia pseudomallei K96243 hypothetical protein YP_107330.1 799353 R 272560 CDS YP_107331.1 53718345 3094055 800104..801786 1 NC_006350.1 Similar to Mycobacterium tuberculosis hypothetical protein rv2577 or mt2654 or mtcy227.24C SWALL:YP77_MYCTU (SWALL:Q50644) (529 aa) fasta scores: E(): 1.5e-17, 39.55% id in 579 aa, and to Aspergillus ficuum acid phosphatase precursor aphA SWALL:Q12546 (EMBL:U18553) (614 aa) fasta scores: E(): 1.9e-06, 29.41% id in 204 aa, and to Lupinus albus acid phosphatase SWALL:Q9XJ24 (EMBL:AB023385) (638 aa) fasta scores: E(): 3.4e-06, 25.4% id in 370 aa; calcineurin-like phosphoesterase 801786 3094055 BPSL0702 Burkholderia pseudomallei K96243 calcineurin-like phosphoesterase YP_107331.1 800104 D 272560 CDS YP_107332.1 53718346 3093006 complement(801764..803647) 1 NC_006350.1 Similar to Xanthomonas campestris histidine kinase xcc1957 SWALL:AAM41246 (EMBL:AE012299) (408 aa) fasta scores: E(): 1.1e-42, 50.16% id in 297 aa, and to Xanthomonas axonopodis histidine kinase xac1991 SWALL:AAM36853 (EMBL:AE011834) (408 aa) fasta scores: E(): 1.3e-42, 49.49% id in 297 aa, and to Pseudomonas aeruginosa probable two-component sensor pa2571 SWALL:Q9I0R5 (EMBL:AE004685) (470 aa) fasta scores: E(): 1.4e-42, 46.93% id in 326 aa; two-component sensor histidine kinase 803647 3093006 BPSL0703 Burkholderia pseudomallei K96243 two-component sensor histidine kinase YP_107332.1 801764 R 272560 CDS YP_107333.1 53718347 3093007 complement(803697..805016) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable two-component response regulator pa2572 SWALL:Q9I0R4 (EMBL:AE004685) (447 aa) fasta scores: E(): 2.9e-47, 36.94% id in 425 aa, and to Vibrio cholerae response regulator vc1087 SWALL:Q9KT18 (EMBL:AE004189) (447 aa) fasta scores: E(): 9.8e-19, 32.33% id in 436 aa, and to Spirulina platensis adenylate cyclase cyaC SWALL:O32393 (EMBL:D49692) (1202 aa) fasta scores: E(): 4.7e-17, 38.02% id in 192 aa; two-component response regulator protein 805016 3093007 BPSL0704 Burkholderia pseudomallei K96243 two-component response regulator protein YP_107333.1 803697 R 272560 CDS YP_107334.1 53718348 3092324 805804..806385 1 NC_006350.1 Weakly similar to Pseudomonas aeruginosa hypothetical protein Pa2134 SWALL:Q9I1Y1 (EMBL:AE004641) (190 aa) fasta scores: E(): 0.002, 29.6% id in 152 aa; hits of low significance in the databases; alternative start site at codon 45; hypothetical protein 806385 3092324 BPSL0705 Burkholderia pseudomallei K96243 hypothetical protein YP_107334.1 805804 D 272560 CDS YP_107335.1 53718349 3092325 complement(806553..808304) 1 NC_006350.1 Similar to Escherichia coli aerotaxis receptor aer or air or b3072 SWALL:AER_ECOLI (SWALL:P50466) (506 aa) fasta scores: E(): 1.1e-73, 47.48% id in 516 aa, and to Ralstonia solanacearum probable aerotaxis sensor receptor aer or rsp1224 or rs03168 SWALL:Q8XQK0 (EMBL:AL646083) (514 aa) fasta scores: E(): 1.3e-103, 61.5% id in 517 aa, and to Yersinia pestis methyl-accepting chemotaxis protein ypo1644 SWALL:Q8ZFP9 (EMBL:AJ414149) (526 aa) fasta scores: E(): 1e-86, 53.17% id in 519 aa; aerotaxis sensor receptor 808304 3092325 BPSL0706 Burkholderia pseudomallei K96243 aerotaxis sensor receptor YP_107335.1 806553 R 272560 CDS YP_107336.1 53718350 3092061 complement(809196..810956) 1 NC_006350.1 Similar to Burkholderia cepacia cholesterol oxidase ChoS SWALL:Q93RE1 (EMBL:AB051407) (582 aa) fasta scores: E(): 6.7e-158, 66.83% id in 579 aa, and to Pseudomonas aeruginosa hypothetical protein PA4140 SWALL:Q9HWP1 (EMBL:AE004830) (597 aa) fasta scores: E(): 4.3e-132, 56.02% id in 589 aa; hypothetical protein 810956 3092061 BPSL0707 Burkholderia pseudomallei K96243 hypothetical protein YP_107336.1 809196 R 272560 CDS YP_107337.1 53718351 3094848 811759..812583 1 NC_006350.1 Similar to Yersinia pestis LysR-family transcriptional regulatory protein ypo2497 SWALL:Q8ZDQ9 (EMBL:AJ414152) (313 aa) fasta scores: E(): 1e-29, 39.68% id in 257 aa, and to Escherichia coli O157:H7 transcriptional regulator lysR-type yeaT or z2842 or ecs2508 SWALL:Q8XDS5 (EMBL:AE005402) (314 aa) fasta scores: E(): 5.7e-29, 40.66% id in 241 aa, and to Escherichia coli hypothetical transcriptional regulator YeaT yeaT or b1799 SWALL:YEAT_ECOLI (SWALL:P76250) (307 aa) fasta scores: E(): 1.8e-28, 40.24% id in 241 aa; LysR family transcriptional regulator 812583 3094848 BPSL0709 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107337.1 811759 D 272560 CDS YP_107338.1 53718352 3094849 812633..813712 1 NC_006350.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 813712 3094849 BPSL0710 Burkholderia pseudomallei K96243 tRNA 2-selenouridine synthase YP_107338.1 812633 D 272560 CDS YP_107339.1 53718353 3092608 complement(814099..814437) 1 NC_006350.1 hypothetical protein 814437 3092608 BPSL0711 Burkholderia pseudomallei K96243 hypothetical protein YP_107339.1 814099 R 272560 CDS YP_107340.1 53718354 3092609 complement(814656..816029) 1 NC_006350.1 Similar to Xylella fastidiosa nitrate ABC transporter ATP-binding protein xf0412 SWALL:Q9PG90 (EMBL:AE003892) (433 aa) fasta scores: E(): 1.2e-69, 52.6% id in 422 aa, and to Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc3372 or rs02647 SWALL:Q8XU22 (EMBL:AL646075) (449 aa) fasta scores: E(): 1.1e-57, 47.87% id in 424 aa, and to Pyrobaculum aerophilum taurine pae1066 SWALL:Q8ZXW3 (EMBL:AE009801) (254 aa) fasta scores: E(): 3.3e-31, 47.76% id in 224 aa; ATP-binding transmembrane ABC transporter 816029 3092609 BPSL0712 Burkholderia pseudomallei K96243 ATP-binding transmembrane ABC transporter YP_107340.1 814656 R 272560 CDS YP_107341.1 53718355 3094786 complement(816038..817771) 1 NC_006350.1 Similar to Xylella fastidiosa ABC transporter nitrate permease xf0411 SWALL:Q9PG91 (EMBL:AE003892) (584 aa) fasta scores: E(): 2.1e-123, 58.31% id in 583 aa, and to Ralstonia solanacearum transmembrane ABC transporter protein rsc3371 or rs02646 SWALL:Q8XU23 (EMBL:AL646075) (586 aa) fasta scores: E(): 9.6e-115, 54.85% id in 556 aa, and to Sulfolobus solfataricus ABC transporter sso2468 SWALL:Q97VY5 (EMBL:AE006845) (535 aa) fasta scores: E(): 1.6e-24, 24.09% id in 527 aa; transmembrane transporter 817771 3094786 BPSL0713 Burkholderia pseudomallei K96243 transmembrane transporter YP_107341.1 816038 R 272560 CDS YP_107342.1 53718356 3094038 819482..820171 1 NC_006350.1 Similar to Methanosarcina mazei hypothetical protein Mm1779 SWALL:AAM31475 (EMBL:AE013414) (226 aa) fasta scores: E(): 4.3e-41, 57.27% id in 213 aa, and to Mycobacterium tuberculosis hypothetical protein rv0571c rv0571c or mt0597 or mtv039.09C SWALL:O53768 (EMBL:AL021942) (451 aa) fasta scores: E(): 4.9e-40, 60.27% id in 219 aa, and to Agrobacterium tumefaciens hypothetical protein atu3651 atu3651 or agr_l_2363 SWALL:Q8U9S4 (EMBL:AE009293) (288 aa) fasta scores: E(): 3.2e-05, 31.13% id in 212 aa; hypothetical protein 820171 3094038 BPSL0716 Burkholderia pseudomallei K96243 hypothetical protein YP_107342.1 819482 D 272560 CDS YP_107343.1 53718357 3094039 820168..821523 1 NC_006350.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 821523 3094039 BPSL0717 Burkholderia pseudomallei K96243 nicotinate phosphoribosyltransferase YP_107343.1 820168 D 272560 CDS YP_107344.1 53718358 3093079 821674..822381 1 NC_006350.1 Similar to Anabaena sp. hypothetical protein All1995 all1995 SWALL:Q8YVI3 (EMBL:AP003587) (221 aa) fasta scores: E(): 5.2e-36, 52.8% id in 214 aa, and to Methanosarcina mazei hypothetical protein Mm1780 mm1780 SWALL:AAM31476 (EMBL:AE013414) (221 aa) fasta scores: E(): 2.3e-35, 50.47% id in 212 aa, and to Mycobacterium tuberculosis DNA sequence SWALL:Q50819 (EMBL:M93129) (385 aa) fasta scores: E(): 4e-34, 48.14% id in 243 aa; phosphoribosyl transferase 822381 3093079 BPSL0718 Burkholderia pseudomallei K96243 phosphoribosyl transferase YP_107344.1 821674 D 272560 CDS YP_107345.1 53718359 3093080 complement(822429..825545) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1476 or rs03830 SWALL:Q8XZC5 (EMBL:AL646064) (1035 aa) fasta scores: E(): 1.5e-175, 47.73% id in 1014 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0788 pa0788 SWALL:Q9I5F0 (EMBL:AE004513) (1041 aa) fasta scores: E(): 1.1e-164, 46.06% id in 990 aa, and to Vibrio cholerae hypothetical protein Vc1321 vc1321 SWALL:Q9KSD7 (EMBL:AE004212) (1023 aa) fasta scores: E(): 5.9e-158, 44.92% id in 1004 aa; hypothetical protein 825545 3093080 BPSL0719 Burkholderia pseudomallei K96243 hypothetical protein YP_107345.1 822429 R 272560 CDS YP_107346.1 53718360 3094667 complement(826042..827481) 1 NC_006350.1 Similar to Acetobacter polyoxogenes, and Acetobacter europaeus alcohol dehydrogenase cytochrome c subunit precursor adhB SWALL:CYCA_ACEPO (SWALL:Q03318) (468 aa) fasta scores: E(): 2.7e-55, 44.49% id in 418 aa, and to Pseudomonas aeruginosa probable cytochrome c precursor pa2266 SWALL:Q9I1K7 (EMBL:AE004652) (439 aa) fasta scores: E(): 9.6e-56, 45.51% id in 424 aa; alcohol dehydrogenase cytochrome c subunit 827481 3094667 BPSL0720 Burkholderia pseudomallei K96243 alcohol dehydrogenase cytochrome c subunit YP_107346.1 826042 R 272560 CDS YP_107347.1 53718361 3094668 complement(827463..828095) 1 NC_006350.1 hypothetical protein 828095 3094668 BPSL0721 Burkholderia pseudomallei K96243 hypothetical protein YP_107347.1 827463 R 272560 CDS YP_107348.1 53718362 3092897 complement(828092..830917) 1 NC_006350.1 Similar to Rhizobium loti cytochrome c oxidase subunit I mll9630 SWALL:Q98P35 (EMBL:AP003017) (623 aa) fasta scores: E(): 4.7e-114, 49.91% id in 617 aa, and to Rhodobacter sphaeroides quinol oxidase subunit I QoxA SWALL:Q9Z605 (EMBL:AF111945) (825 aa) fasta scores: E(): 4.1e-101, 36.86% id in 898 aa, and to Rhizobium meliloti cytochrome c oxidase chain i protein rb0948 or smb21370 SWALL:Q92UY6 (EMBL:AL603645) (841 aa) fasta scores: E(): 4.3e-99, 36.39% id in 915 aa, and to Bacillus subtilis cytochrome c oxidase polypeptide I ctaD SWALL:COX1_BACSU (SWALL:P24010) (622 aa) fasta scores: E(): 5.4e-92, 42.45% id in 596 aa; possible pseudogene; cytochrome c oxidase subunit I 830917 3092897 BPSL0722 Burkholderia pseudomallei K96243 cytochrome c oxidase subunit I YP_107348.1 828092 R 272560 CDS YP_107349.1 53718363 3092898 complement(830934..832055) 1 NC_006350.1 Similar to Bacillus firmus cytochrome c oxidase polypeptide II precursor ctaC SWALL:COX2_BACFI (SWALL:Q04441) (342 aa) fasta scores: E(): 3e-28, 34.07% id in 314 aa, and to Rhizobium loti cytochrome oxidase subunit II mll9631 SWALL:Q98P34 (EMBL:AP003017) (330 aa) fasta scores: E(): 1.6e-39, 43.77% id in 297 aa, and to Rhizobium meliloti cytochrome c oxidase chain II protein rb0946 or smb21368 SWALL:Q92UY8 (EMBL:AL603645) (327 aa) fasta scores: E(): 2e-35, 40.36% id in 327 aa; Possible alternative start at codon 70; cytochrome c oxidase polypeptide II 832055 3092898 BPSL0723 Burkholderia pseudomallei K96243 cytochrome c oxidase polypeptide II YP_107349.1 830934 R 272560 CDS YP_107350.1 53718364 3092843 complement(832108..833934) 1 NC_006350.1 catalyzes the formation of acetate from pyruvate; thiamine pyrophosphate protein 833934 3092843 BPSL0724 Burkholderia pseudomallei K96243 thiamine pyrophosphate protein YP_107350.1 832108 R 272560 CDS YP_107351.1 53718365 3092844 834328..835428 1 NC_006350.1 Similar to Pseudomonas putida mandelate racemase mdlA SWALL:MANR_PSEPU (SWALL:P11444) (359 aa) fasta scores: E(): 4.1e-16, 28.42% id in 380 aa, and to Streptomyces coelicolor racemase sco7415 or sc6d11.11 SWALL:Q9L144 (EMBL:AL158061) (385 aa) fasta scores: E(): 1.4e-64, 49.04% id in 367 aa, and to Brucella melitensis mandelate racemase bmei1712 SWALL:Q8YF15 (EMBL:AE009605) (372 aa) fasta scores: E(): 2.4e-30, 36% id in 350 aa; mandelate racemase 835428 3092844 BPSL0725 Burkholderia pseudomallei K96243 mandelate racemase YP_107351.1 834328 D 272560 CDS YP_107352.1 53718366 3092404 835438..836409 1 NC_006350.1 hypothetical protein 836409 3092404 BPSL0726 Burkholderia pseudomallei K96243 hypothetical protein YP_107352.1 835438 D 272560 CDS YP_107353.1 53718367 3092405 836406..837242 1 NC_006350.1 hypothetical protein 837242 3092405 BPSL0727 Burkholderia pseudomallei K96243 hypothetical protein YP_107353.1 836406 D 272560 CDS YP_107354.1 53718368 3094384 837325..838923 1 NC_006350.1 Similar to Burkholderia cepacia glucose dehydrogenase gdhalphA SWALL:AAN39686 (EMBL:AF430844) (539 aa) fasta scores: E(): 5.8e-30, 29.76% id in 541 aa, and to Xanthomonas axonopodis 2-keto-gluconate dehydrogenase xac2128 SWALL:Q8PKP1 (EMBL:AE011848) (508 aa) fasta scores: E(): 5.4e-62, 41.53% id in 520 aa, and to Halobacterium sp. Vng1035C vng1035C SWALL:Q9HQR8 (EMBL:AE005037) (529 aa) fasta scores: E(): 2.8e-44, 35.97% id in 531 aa; glucose dehydrogenase 838923 3094384 BPSL0728 Burkholderia pseudomallei K96243 glucose dehydrogenase YP_107354.1 837325 D 272560 CDS YP_107355.1 53718369 3094385 complement(838970..840907) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0747 or rs01961 SWALL:Q8XRT4 (EMBL:AL646080) (616 aa) fasta scores: E(): 1.6e-58, 45.23% id in 619 aa, and to Rhizobium leguminosarum ImpG SWALL:Q93EC7 (EMBL:AF361470) (593 aa) fasta scores: E(): 1.2e-25, 31.75% id in 611 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0088 SWALL:Q9I744 (EMBL:AE004447) (619 aa) fasta scores: E(): 1.7e-25, 30.9% id in 631 aa; hypothetical protein 840907 3094385 BPSL0729 Burkholderia pseudomallei K96243 hypothetical protein YP_107355.1 838970 R 272560 CDS YP_107356.1 53718370 3092649 841615..844116 1 NC_006350.1 Similar to Pseudomonas sp. penicillin acylase II precursor AcyII SWALL:PAC2_PSES3 (SWALL:P15558) (773 aa) fasta scores: E(): 4.1e-30, 29.28% id in 782 aa, and to Xanthomonas campestris penicillin acylase II AcyII or xcc1392 SWALL:AAM40690 (EMBL:AE012238) (828 aa) fasta scores: E(): 5.1e-43, 40.81% id in 838 aa, and to Xanthomonas axonopodis penicillin acylase II acyII or xac1437 SWALL:AAM36308 (EMBL:AE011775) (569 aa) fasta scores: E(): 1e-41, 41.78% id in 572 aa; possible alternative start site at codon 71; peptidase 844116 3092649 BPSL0730 Burkholderia pseudomallei K96243 peptidase YP_107356.1 841615 D 272560 CDS YP_107357.1 53718371 3092650 844113..845339 1 NC_006350.1 Similar to previously sequenced Burkholderia cepacia transcriptional regulator CeoR ceoR SWALL:Q8VL17 (EMBL:AY008288) (334 aa) fasta scores: E(): 1.1e-81, 64.39% id in 323 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1110 or rs02618 SWALL:Q8XQV8 (EMBL:AL646082) (315 aa) fasta scores: E(): 1.8e-59, 49.33% id in 300 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2877 SWALL:Q9HZX0 (EMBL:AE004714) (297 aa) fasta scores: E(): 2.1e-49, 45.57% id in 294 aa; LysR family transcriptional regulator 845339 3092650 BPSL0731 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107357.1 844113 D 272560 CDS YP_107358.1 53718372 3094651 complement(845513..847321) 1 NC_006350.1 Similar to Rhodobacter sphaeroides DMSO/TMAO-sensor kinase dorS SWALL:O30740 (EMBL:AF016236) (815 aa) fasta scores: E(): 4.6e-25, 33.24% id in 385 aa, and to Caulobacter crescentus sensor histidine kinase / response regulator cc0723 SWALL:Q9AA83 (EMBL:AE005747) (591 aa) fasta scores: E(): 1.6e-27, 30.34% id in 412 aa, and to Xanthomonas campestris two-component system sensor protein xcc2360 SWALL:AAM41638 (EMBL:AE012344) (1364 aa) fasta scores: E(): 3.7e-26, 29.7% id in 404 aa; two-component regulator histidine sensor kinase 847321 3094651 BPSL0732 Burkholderia pseudomallei K96243 two-component regulator histidine sensor kinase YP_107358.1 845513 R 272560 CDS YP_107359.1 53718373 3094652 complement(847318..847833) 1 NC_006350.1 C-terminus is similar to the C-terminal region of Agrobacterium tumefaciens hypothetical protein atu3496 or agr_l_2662 SWALL:Q8UA78 (EMBL:AE009279) (168 aa) fasta scores: E(): 4.3e-11, 34.78% id in 138 aa. Weakly similar to to Pseudomonas aeruginosa hypothetical protein pa2869 SWALL:Q9HZX7 (EMBL:AE004713) (162 aa) fasta scores: E(): 2.8e-07, 28.48% id in 158 aa, and to Vibrio cholerae hypothetical protein vc1933 SWALL:Q9KQR5 (EMBL:AE004269) (156 aa) fasta scores: E(): 7e-06, 27.04% id in 159 aa, and to Vibrio cholerae hypothetical protein Vca0075 vca0075 SWALL:Q9KN90 (EMBL:AE004350) (155 aa) fasta scores: E(): 9.5e-06, 28.85% id in 149 aa; hypothetical protein 847833 3094652 BPSL0733 Burkholderia pseudomallei K96243 hypothetical protein YP_107359.1 847318 R 272560 CDS YP_107360.1 53718374 3094440 complement(847843..848805) 1 NC_006350.1 From codon 189-321 similar to Xanthomonas axonopodis two-component system regulatory protein colR or xac1221 SWALL:AAM36093 (EMBL:AE011752) (238 aa) fasta scores: E(): 0.0042, 24.21% id in 128 aa, and to Ralstonia solanacearum probable two-component system response regulator transcription regulator protein rsc1073 or rs04004 SWALL:Q8Y0H1 (EMBL:AL646062) (237 aa) fasta scores: E(): 0.0087, 30.46% id in 128 aa; two-component transcriptional response regulator 848805 3094440 BPSL0734 Burkholderia pseudomallei K96243 two-component transcriptional response regulator YP_107360.1 847843 R 272560 CDS YP_107361.1 53718375 3094441 849102..849665 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 849665 3094441 BPSL0735 Burkholderia pseudomallei K96243 hypothetical protein YP_107361.1 849102 D 272560 CDS YP_107362.1 53718376 3092562 complement(851785..852705) 1 NC_006350.1 No significant hits in the databases; hypothetical protein 852705 3092562 BPSL0736 Burkholderia pseudomallei K96243 hypothetical protein YP_107362.1 851785 R 272560 CDS YP_107363.1 53718377 3092563 852864..853181 1 NC_006350.1 Doubtful CDS. No significant hits in the databases; hypothetical protein 853181 3092563 BPSL0737 Burkholderia pseudomallei K96243 hypothetical protein YP_107363.1 852864 D 272560 CDS YP_107364.1 53718378 3092126 853178..854035 1 NC_006350.1 Weakly similar to Agrobacterium tumefaciens hypothetical protein atu5018 or agr_pat_24 SWALL:Q8UKT1 (EMBL:AE008927) (288 aa) fasta scores: E(): 0.00011, 27.24% id in 290 aa; hypothetical protein 854035 3092126 BPSL0738 Burkholderia pseudomallei K96243 hypothetical protein YP_107364.1 853178 D 272560 CDS YP_107365.1 53718379 3092127 complement(854145..854459) 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 854459 3092127 BPSL0739 Burkholderia pseudomallei K96243 hypothetical protein YP_107365.1 854145 R 272560 CDS YP_107367.1 53718381 3092842 complement(855094..855651) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2611 or rs00860 SWALL:Q8XW64 (EMBL:AL646071) (187 aa) fasta scores: E(): 5.2e-12, 33.33% id in 183 aa, and to Anabaena sp. hypothetical protein all2200 SWALL:Q8YUY1 (EMBL:AP003588) (186 aa) fasta scores: E(): 8.2e-12, 32.54% id in 169 aa; hypothetical protein 855651 3092842 BPSL0741 Burkholderia pseudomallei K96243 hypothetical protein YP_107367.1 855094 R 272560 CDS YP_107368.1 53718382 3091534 complement(855653..856495) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2612 or rs00912 SWALL:Q8XW63 (EMBL:AL646071) (282 aa) fasta scores: E(): 7e-12, 26.29% id in 270 aa, and to Streptomyces coelicolor regulatory protein sco3291 or sce15.08 SWALL:Q9X883 (EMBL:AL049707) (477 aa) fasta scores: E(): 2.3e-07, 26.53% id in 196 aa; hypothetical protein 856495 3091534 BPSL0742 Burkholderia pseudomallei K96243 hypothetical protein YP_107368.1 855653 R 272560 CDS YP_107369.1 53718383 3091535 complement(856592..857440) 1 NC_006350.1 Similar to Vibrio cholerae hypothetical protein vca0396 SWALL:Q9KMG2 (EMBL:AE004375) (276 aa) fasta scores: E(): 1.4e-43, 44.2% id in 276 aa; hypothetical protein 857440 3091535 BPSL0743 Burkholderia pseudomallei K96243 hypothetical protein YP_107369.1 856592 R 272560 CDS YP_107370.1 53718384 3092573 complement(857474..858832) 1 NC_006350.1 Similar to Xanthomonas axonopodis integrase xac3298 SWALL:AAM38142 (EMBL:AE011975) (505 aa) fasta scores: E(): 9.7e-19, 28.48% id in 488 aa, and to Xanthomonas axonopodis phage-related integrase int or xac1510 SWALL:AAM36380 (EMBL:AE011783) (510 aa) fasta scores: E(): 3.2e-13, 28.09% id in 363 aa, and to Escherichia coli O157:H7 integrase z5878 or ecs5242 SWALL:Q8XC99 (EMBL:AE005658) (649 aa) fasta scores: E(): 6.8e-13, 27.9% id in 319 aa; phage-related integrase 858832 3092573 BPSL0744 Burkholderia pseudomallei K96243 phage-related integrase YP_107370.1 857474 R 272560 CDS YP_107371.1 53718385 3092574 859567..860280 1 NC_006350.1 hypothetical protein 860280 3092574 BPSL0745 Burkholderia pseudomallei K96243 hypothetical protein YP_107371.1 859567 D 272560 CDS YP_107372.1 53718386 3091667 860669..861031 1 NC_006350.1 hypothetical protein 861031 3091667 BPSL0746 Burkholderia pseudomallei K96243 hypothetical protein YP_107372.1 860669 D 272560 CDS YP_107373.1 53718387 3091668 861100..862581 1 NC_006350.1 hypothetical protein 862581 3091668 BPSL0747 Burkholderia pseudomallei K96243 hypothetical protein YP_107373.1 861100 D 272560 CDS YP_107374.1 53718388 3091998 862583..862909 1 NC_006350.1 hypothetical protein 862909 3091998 BPSL0747a Burkholderia pseudomallei K96243 hypothetical protein YP_107374.1 862583 D 272560 CDS YP_107375.1 53718389 3091999 863547..864605 1 NC_006350.1 No significant database matches to the full length CDS. N-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0325 or ecs0290 SWALL:Q8X7K6 (EMBL:AE005203) (138 aa) fasta scores: E(): 7.4e-11, 37.98% id in 129 aa, and the C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0326 or ecs0291 SWALL:Q8X7K5 (EMBL:AE005203) (205 aa) fasta scores: E(): 7e-12, 31.25% id in 192 aa. CDS is a possible fusion protein; hypothetical protein 864605 3091999 BPSL0748 Burkholderia pseudomallei K96243 hypothetical protein YP_107375.1 863547 D 272560 CDS YP_107376.1 53718390 3091450 864580..865065 1 NC_006350.1 Similar to Escherichia coli O157:H7 hypothetical protein z0327 or ecs0292 SWALL:Q8X7K4 (EMBL:AE005203) (152 aa) fasta scores: E(): 6.8e-05, 22.44% id in 147 aa; hypothetical protein 865065 3091450 BPSL0749 Burkholderia pseudomallei K96243 hypothetical protein YP_107376.1 864580 D 272560 CDS YP_107377.1 53718391 3091451 865065..866873 1 NC_006350.1 C-terminal region is similar to Escherichia coli O157:H7 hypothetical protein z0331 or ecs0295 SWALL:Q8X7J2 (EMBL:AE005203) (188 aa) fasta scores: E(): 4.3e-09, 27.52% id in 178 aa; hypothetical protein 866873 3091451 BPSL0750 Burkholderia pseudomallei K96243 hypothetical protein YP_107377.1 865065 D 272560 CDS YP_107378.1 53718392 3091615 867220..868476 1 NC_006350.1 hypothetical protein 868476 3091615 BPSL0751 Burkholderia pseudomallei K96243 hypothetical protein YP_107378.1 867220 D 272560 CDS YP_107379.1 53718393 3091616 868473..869510 1 NC_006350.1 hypothetical protein 869510 3091616 BPSL0752 Burkholderia pseudomallei K96243 hypothetical protein YP_107379.1 868473 D 272560 CDS YP_107380.1 53718394 3091852 869736..870419 1 NC_006350.1 hypothetical protein 870419 3091852 BPSL0753 Burkholderia pseudomallei K96243 hypothetical protein YP_107380.1 869736 D 272560 CDS YP_107381.1 53718395 3093245 complement(873400..873708) 1 NC_006350.1 Similar to Salmonella enterica, and Salmonella paratyphi-A regulatory protein SbaIC SWALL:Q9EZ27 (EMBL:AF508974) (78 aa) fasta scores: E(): 1.8e-08, 49.33% id in 75 aa, and to Proteus vulgaris transcriptional activator for bicistronic pvuIICR operon PvuIIC SWALL:Q52622 (EMBL:AF305615) (84 aa) fasta scores: E(): 6e-06, 41.25% id in 80 aa, and to Escherichia coli O157:H7 z5888 protein z5888 or ecs5252 SWALL:Q8XC87 (EMBL:AE005659) (154 aa) fasta scores: E(): 6.4e-06, 40.26% id in 77 aa; DNA-binding protein 873708 3093245 BPSL0756 Burkholderia pseudomallei K96243 DNA-binding protein YP_107381.1 873400 R 272560 CDS YP_107382.1 53718396 3093246 874119..874562 1 NC_006350.1 hypothetical protein 874562 3093246 BPSL0757 Burkholderia pseudomallei K96243 hypothetical protein YP_107382.1 874119 D 272560 CDS YP_107383.1 53718397 3091927 874574..875362 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0544 SWALL:Q9I5Z2 (EMBL:AE004490) (247 aa) fasta scores: E(): 4e-32, 40% id in 255 aa, and to Microscilla sp. PRE1 ms153 SWALL:Q93P78 (EMBL:AF339846) (253 aa) fasta scores: E(): 1.5e-10, 28.62% id in 248 aa, and to Microscilla sp. PRE1 ms158, hypothetical protein SWALL:Q93P73 (EMBL:AF339846) (252 aa) fasta scores: E(): 5.7e-09, 27.12% id in 247 aa; phosphoesterase 875362 3091927 BPSL0758 Burkholderia pseudomallei K96243 phosphoesterase YP_107383.1 874574 D 272560 CDS YP_107384.1 53718398 3091928 875636..876130 1 NC_006350.1 No significant database matches. Similar to BPSL0551, 75.904% identity (76.829% ungapped) in 166 aa overlap; hypothetical protein 876130 3091928 BPSL0759 Burkholderia pseudomallei K96243 hypothetical protein YP_107384.1 875636 D 272560 CDS YP_107385.1 53718399 3091782 876189..876446 1 NC_006350.1 hypothetical protein 876446 3091782 BPSL0760 Burkholderia pseudomallei K96243 hypothetical protein YP_107385.1 876189 D 272560 CDS YP_107386.1 53718400 3091783 876443..877015 1 NC_006350.1 hypothetical protein 877015 3091783 BPSL0761 Burkholderia pseudomallei K96243 hypothetical protein YP_107386.1 876443 D 272560 CDS YP_107387.1 53718401 3091957 877250..877804 1 NC_006350.1 Similar to Escherichia coli RNA 2'-phosphotransferase KptA or b4331 SWALL:KPTA_ECOLI (SWALL:P39380) (184 aa) fasta scores: E(): 7.1e-26, 45.93% id in 172 aa, and to Streptomyces coelicolor probable RNA 2'-phosphotransferase sco3953 or scd78.20C SWALL:KPTA_STRCO (SWALL:Q9ZBX9) (182 aa) fasta scores: E(): 5.9e-37, 56.89% id in 174 aa; RNA 2'-phosphotransferase 877804 3091957 BPSL0762 Burkholderia pseudomallei K96243 RNA 2'-phosphotransferase YP_107387.1 877250 D 272560 CDS YP_107388.1 53718402 3091958 878619..881801 1 NC_006350.1 Similar to Bacteroides nodosus DEAH ATP-dependent helicase SWALL:O32494 (EMBL:U20246) (965 aa) fasta scores: E(): 2.4e-28, 28.84% id in 780 aa, and to Xanthomonas campestris helicase xcc0524 SWALL:AAM39840 (EMBL:AE012150) (967 aa) fasta scores: E(): 1.8e-11, 25.36% id in 962 aa, and to Halobacterium sp. similar to Escherichia coli vng5141g or vng6139G SWALL:O52003 (EMBL:AF016485) (979 aa) fasta scores: E(): 1.9e-10, 27.33% id in 995 aa. Possible alternative translational start site; helicase SNF2 family protein 881801 3091958 BPSL0763 Burkholderia pseudomallei K96243 helicase SNF2 family protein YP_107388.1 878619 D 272560 CDS YP_107389.1 53718403 3094852 881805..886049 1 NC_006350.1 Weakly similar to Borrelia burgdorferi hypothetical protein bbh09 SWALL:O50667 (EMBL:AE000784) (1278 aa) fasta scores: E(): 5.5e-09, 23.87% id in 490 aa, and Borrelia burgdorferi hypothetical protein bbe02 SWALL:O50698 (EMBL:AE000785) (1277 aa) fasta scores: E(): 1.1e-08, 23.82% id in 491 aa; hypothetical protein 886049 3094852 BPSL0764 Burkholderia pseudomallei K96243 hypothetical protein YP_107389.1 881805 D 272560 CDS YP_107390.1 53718404 3094853 886079..889639 1 NC_006350.1 Similar to Methanosarcina mazei superfamily II DNA and RNA helicase mm0276 SWALL:AAM29972 (EMBL:AE013252) (1275 aa) fasta scores: E(): 2.2e-29, 29.29% id in 1205 aa, and to Methanobacterium thermoautotrophicum hypothetical protein MTH497 SWALL:O26597 (EMBL:AE000833) (1235 aa) fasta scores: E(): 4.5e-15, 29.16% id in 1310 aa; helicase 889639 3094853 BPSL0765 Burkholderia pseudomallei K96243 helicase YP_107390.1 886079 D 272560 CDS YP_107391.1 53718405 3093688 889636..891471 1 NC_006350.1 Weakly similar to Methanobacterium thermoautotrophicum hypothetical protein mth498 SWALL:O26598 (EMBL:AE000833) (578 aa) fasta scores: E(): 9e-26, 26.06% id in 637 aa, and Methanosarcina mazei hypothetical protein mm0275 SWALL:AAM29971 (EMBL:AE013252) (600 aa) fasta scores: E(): 8e-07, 25.03% id in 643 aa; hypothetical protein 891471 3093688 BPSL0766 Burkholderia pseudomallei K96243 hypothetical protein YP_107391.1 889636 D 272560 CDS YP_107392.1 53718406 3093689 891474..892274 1 NC_006350.1 No significant database matches to the full length CDS. C-terminal region is weakly similar to internal region of Xanthomonas campestris cardiolipin synthase xcc2706 SWALL:Q8P7A5 (EMBL:AE012383) (520 aa) fasta scores: E(): 0.048, 31.94% id in 144 aa, and to Yersinia enterocolitica endonuclease Nuc SWALL:Q9ZA69 (EMBL:AF102990) (180 aa) fasta scores: E(): 0.79, 28.99% id in 169 aa; phospholipase 892274 3093689 BPSL0767 Burkholderia pseudomallei K96243 phospholipase YP_107392.1 891474 D 272560 CDS YP_107393.1 53718407 3093433 892358..893590 1 NC_006350.1 Similar to Xanthomonas campestris hypothetical protein xcc1600 SWALL:AAM40894 (EMBL:AE012261) (404 aa) fasta scores: E(): 3.9e-52, 37.92% id in 385 aa, and to Agrobacterium tumefaciens Ti plasmid hypothetical protein Ymg SWALL:O52296 (EMBL:AF242881) (388 aa) fasta scores: E(): 3.6e-09, 27.12% id in 424 aa, and to Vibrio cholerae hypothetical protein vc0492 SWALL:Q9KUM3 (EMBL:AE004135) (388 aa) fasta scores: E(): 5.3e-07, 20.9% id in 397 aa; hypothetical protein 893590 3093433 BPSL0768 Burkholderia pseudomallei K96243 hypothetical protein YP_107393.1 892358 D 272560 CDS YP_107394.1 53718408 3093434 893583..894086 1 NC_006350.1 Weakly similar to Agrobacterium tumefaciens Ti plasmid hypothetical protein Ymf SWALL:O52295 (EMBL:AF242881) (168 aa) fasta scores: E(): 0.43, 28.14% id in 167 aa; No significant database matches; hypothetical protein 894086 3093434 BPSL0769 Burkholderia pseudomallei K96243 hypothetical protein YP_107394.1 893583 D 272560 CDS YP_107395.1 53718409 3092951 894083..896029 1 NC_006350.1 Similar to Xanthomonas campestris plasmid-related protein xcc1599 SWALL:AAM40893 (EMBL:AE012261) (659 aa) fasta scores: E(): 9.2e-77, 36.67% id in 649 aa, and to Agrobacterium tumefaciens Ti plasmid hypothetical protein Yme SWALL:O52294 (EMBL:AF242881) (660 aa) fasta scores: E(): 2.1e-40, 28.83% id in 652 aa, and to Vibrio cholerae hypothetical protein vc0490 SWALL:Q9KUM5 (EMBL:AE004135) (653 aa) fasta scores: E(): 1.8e-29, 26.52% id in 671 aa; hypothetical protein 896029 3092951 BPSL0770 Burkholderia pseudomallei K96243 hypothetical protein YP_107395.1 894083 D 272560 CDS YP_107396.1 53718410 3092952 complement(896323..896559) 1 NC_006350.1 No significant hits in the databases. Possible alternative start at codon 10; hypothetical protein 896559 3092952 BPSL0771 Burkholderia pseudomallei K96243 hypothetical protein YP_107396.1 896323 R 272560 CDS YP_107397.1 53718411 3094587 complement(896537..898423) 1 NC_006350.1 Possible gene remnant. From codon 361 similar to Xanthomonas campestris phage-related integrase Int or xcc1642 SWALL:Q8PA51 (EMBL:AE012265) (182 aa) fasta scores: E(): 0.029, 32.39% id in 142 aa, and to Xanthomonas axonopodis integrase xac1107 SWALL:Q8PNG3 (EMBL:AE011739) (485 aa) fasta scores: E(): 0.088, 27.41% id in 383 aa; phage integrase 898423 3094587 BPSL0772 Burkholderia pseudomallei K96243 phage integrase YP_107397.1 896537 R 272560 CDS YP_107398.1 53718412 3094588 complement(898930..900600) 1 NC_006350.1 Similar to Caulobacter crescentus major facilitator family transporter cc0980 SWALL:Q9A9K0 (EMBL:AE005775) (567 aa) fasta scores: E(): 1.3e-141, 66.97% id in 548 aa, and to Bradyrhizobium japonicum integral inner membrane metabolite transport protein MtbA SWALL:Q9JMW8 (EMBL:U33883) (555 aa) fasta scores: E(): 3.5e-115, 58.71% id in 562 aa, and to Ralstonia solanacearum sugar transporter transmembrane protein rsc0547 or rs04914 SWALL:Q8Y1Z0 (EMBL:AL646059) (567 aa) fasta scores: E(): 1.3e-113, 71.4% id in 556 aa; transmembrane transport protein 900600 3094588 BPSL0773 Burkholderia pseudomallei K96243 transmembrane transport protein YP_107398.1 898930 R 272560 CDS YP_107399.1 53718413 3093153 complement(900811..902367) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane sensor histidine kinase transcription regulator protein rsc0549 or rs04917 SWALL:Q8Y1Y8 (EMBL:AL646059) (513 aa) fasta scores: E(): 3.9e-104, 58.77% id in 507 aa, and to Ralstonia solanacearum probable two-component transmembrane sensor kinase transcription regulator protein rsc1735 or rs02923 SWALL:Q8XYM3 (EMBL:AL646066) (471 aa) fasta scores: E(): 2e-49, 37.69% id in 451 aa, and to Rhizobium loti two-component system, sensor protein mll7952 SWALL:Q984L4 (EMBL:AP003013) (452 aa) fasta scores: E(): 9.4e-48, 38.28% id in 444 aa; two-component sensor kinase transcriptional regulatory protein 902367 3093153 BPSL0774 Burkholderia pseudomallei K96243 two-component sensor kinase transcriptional regulatory protein YP_107399.1 900811 R 272560 CDS YP_107400.1 53718414 3093154 complement(902391..903134) 1 NC_006350.1 Similar to Bordetella pertussis transcriptional regulatory protein, BasR SWALL:Q9S3M3 (EMBL:AJ132741) (223 aa) fasta scores: E(): 3.2e-37, 53.6% id in 222 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc0550 or rs04916 SWALL:Q8Y1Y7 (EMBL:AL646059) (232 aa) fasta scores: E(): 2.1e-63, 78.94% id in 228 aa, and to Agrobacterium tumefaciens two component response regulator TctD SWALL:Q8UCL7 (EMBL:AE009193) (245 aa) fasta scores: E(): 1.7e-37, 51.81% id in 220 aa; response regulator transcription regulatory protein 903134 3093154 BPSL0775 Burkholderia pseudomallei K96243 response regulator transcription regulatory protein YP_107400.1 902391 R 272560 CDS YP_107401.1 53718415 3094325 903338..904408 1 NC_006350.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 904408 recA 3094325 recA Burkholderia pseudomallei K96243 recombinase A YP_107401.1 903338 D 272560 CDS YP_107402.1 53718416 3094326 904774..905391 1 NC_006350.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 905391 recX 3094326 recX Burkholderia pseudomallei K96243 recombination regulator RecX YP_107402.1 904774 D 272560 CDS YP_107403.1 53718417 3093914 905683..906294 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0553 or rs04912 SWALL:Q8Y1Y4 (EMBL:AL646059) (208 aa) fasta scores: E(): 4.5e-48, 60.51% id in 195 aa; alternative start site at codon 11; hypothetical protein 906294 3093914 BPSL0778 Burkholderia pseudomallei K96243 hypothetical protein YP_107403.1 905683 D 272560 CDS YP_107404.1 53718418 3093010 906374..907540 1 NC_006350.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 907540 sucC 3093010 sucC Burkholderia pseudomallei K96243 succinyl-CoA synthetase subunit beta YP_107404.1 906374 D 272560 CDS YP_107405.1 53718419 3092908 907685..908566 1 NC_006350.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 908566 sucD 3092908 sucD Burkholderia pseudomallei K96243 succinyl-CoA synthetase subunit alpha YP_107405.1 907685 D 272560 CDS YP_107406.1 53718420 3093915 908618..909430 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa1170 pa1170 SWALL:Q9I4G7 (EMBL:AE004547) (244 aa) fasta scores: E(): 3.1e-40, 54.05% id in 222 aa, and to Ralstonia solanacearum hypothetical transmembrane protein Rsc0556 rsc0556 or rs04909 SWALL:Q8Y1Y1 (EMBL:AL646060) (232 aa) fasta scores: E(): 1e-36, 48.66% id in 224 aa, and to Ralstonia solanacearum probable transmembrane protein rsc0949 or rs04438 SWALL:Q8Y0U4 (EMBL:AL646061) (230 aa) fasta scores: E(): 3.2e-28, 42.24% id in 232 aa; hypothetical protein 909430 3093915 BPSL0781 Burkholderia pseudomallei K96243 hypothetical protein YP_107406.1 908618 D 272560 CDS YP_107407.1 53718421 3092148 909649..910167 1 NC_006350.1 Similar to Ralstonia solanacearum type 4 fimbrial pilin signal peptide protein pilA or rsc0558 or rs04907 SWALL:Q8Y1X9 (EMBL:AL646060) (168 aa) fasta scores: E(): 8.6e-15, 45.9% id in 183 aa, and to Ralstonia solanacearum probable type 4 fimbrial pilin signal peptide protein pilA1 or rsc0557 or rs04908 SWALL:Q8Y1Y0 (EMBL:AL646060) (173 aa) fasta scores: E(): 1.2e-19, 46.89% id in 177 aa, and to Xanthomonas campestris pilin xcc3098 SWALL:AAM42369 (EMBL:AE012425) (144 aa) fasta scores: E(): 3.8e-10, 40% id in 145 aa; type 4 fimbrial pilin protein 910167 3092148 BPSL0782 Burkholderia pseudomallei K96243 type 4 fimbrial pilin protein YP_107407.1 909649 D 272560 CDS YP_107408.1 53718422 3092149 910375..912192 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein Rsc0559 rsc0559 or rs04906 SWALL:Q8Y1X8 (EMBL:AL646060) (569 aa) fasta scores: E(): 3.4e-42, 33.27% id in 526 aa, and to Neisseria meningitidis possible integral membrane protein nma0800 SWALL:Q9JVK5 (EMBL:AL162754) (604 aa) fasta scores: E(): 1.1e-14, 23.06% id in 594 aa, and to Neisseria meningitidis hypothetical protein Nmb0596 nmb0596 SWALL:Q9K0K0 (EMBL:AE002415) (604 aa) fasta scores: E(): 1.4e-14, 23.07% id in 598 aa; hypothetical protein 912192 3092149 BPSL0783 Burkholderia pseudomallei K96243 hypothetical protein YP_107408.1 910375 D 272560 CDS YP_107409.1 53718423 3094398 912788..913261 1 NC_006350.1 Similar to Yersinia pestis exported protein ypo0406 SWALL:Q8ZIT2 (EMBL:AJ414142) (163 aa) fasta scores: E(): 4e-07, 35.15% id in 165 aa; Hits of low significance in the database; upstream repeat region (cggacaccggacac)3 and (catcgga)3; hypothetical protein 913261 3094398 BPSL0784 Burkholderia pseudomallei K96243 hypothetical protein YP_107409.1 912788 D 272560 CDS YP_107410.1 53718424 3094399 913498..913863 1 NC_006350.1 Weakly similar to the C-terminal region of Ralstonia solanacearum probable TonB transmembrane protein rsc1963 or rs03537 SWALL:Q8XY00 (EMBL:AL646067) (221 aa) fasta scores: E(): 0.0082, 26.92% id in 104 aa; Hits of low significance in the databases; lipoprotein 913863 3094399 BPSL0785 Burkholderia pseudomallei K96243 lipoprotein YP_107410.1 913498 D 272560 CDS YP_107411.1 53718425 3093064 complement(914057..914551) 1 NC_006350.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 914551 moaC 3093064 moaC Burkholderia pseudomallei K96243 molybdenum cofactor biosynthesis protein MoaC YP_107411.1 914057 R 272560 CDS YP_107412.1 53718426 3093163 914698..916422 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc0561 or rs04904 SWALL:Q8Y1X6 (EMBL:AL646060) (561 aa) fasta scores: E(): 1.5e-79, 49.27% id in 550 aa. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa1005 SWALL:Q9I4W8 (EMBL:AE004533) (477 aa) fasta scores: E(): 9.1e-33, 34.7% id in 487 aa. Possible alternative translational start site; hypothetical protein 916422 3093163 BPSL0787 Burkholderia pseudomallei K96243 hypothetical protein YP_107412.1 914698 D 272560 CDS YP_107413.1 53718427 3093164 complement(916748..917371) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0562 or rs04903 SWALL:Q8Y1X5 (EMBL:AL646060) (195 aa) fasta scores: E(): 1.8e-34, 50.99% id in 202 aa; downstream repeat region(acagcacaa)3; hypothetical protein 917371 3093164 BPSL0788 Burkholderia pseudomallei K96243 hypothetical protein YP_107413.1 916748 R 272560 CDS YP_107414.1 53718428 3092709 complement(917364..918398) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0563 or rs04902 SWALL:Q8Y1X4 (EMBL:AL646060) (371 aa) fasta scores: E(): 1.5e-76, 58.43% id in 332 aa, and to Neisseria meningitidis hypothetical protein nmb0276 SWALL:Q9K191 (EMBL:AE002384) (318 aa) fasta scores: E(): 3.2e-44, 47.66% id in 321 aa, and to Neisseria meningitidis hypothetical protein nma2211 SWALL:Q9JSN5 (EMBL:AL162758) (318 aa) fasta scores: E(): 3.7e-44, 47.17% id in 318 aa; hydrolase 918398 3092709 BPSL0789 Burkholderia pseudomallei K96243 hydrolase YP_107414.1 917364 R 272560 CDS YP_107415.1 53718429 3092710 complement(918418..918864) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0564 or rs04901 SWALL:Q8Y1X3 (EMBL:AL646060) (146 aa) fasta scores: E(): 2.4e-19, 43.75% id in 144 aa; hypothetical protein 918864 3092710 BPSL0790 Burkholderia pseudomallei K96243 hypothetical protein YP_107415.1 918418 R 272560 CDS YP_107416.1 53718430 3093887 complement(918996..920036) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei heptosyl transferase WaaF SWALL:Q9ZFN3 (EMBL:AF097748) (346 aa) fasta scores: E(): 6.5e-139, 99.42% id in 346 aa. Similar to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF or Waaf SWALL:RFAF_ECOLI (SWALL:P37692) (348 aa) fasta scores: E(): 1.8e-49, 44.03% id in 352 aa; ADP-heptose--LPS heptosyltransferase II 920036 waaF 3093887 waaF Burkholderia pseudomallei K96243 ADP-heptose--LPS heptosyltransferase II YP_107416.1 918996 R 272560 CDS YP_107417.1 53718431 3092094 complement(920164..920361) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0566 or rs04899 SWALL:Q8Y1X1 (EMBL:AL646060) (65 aa) fasta scores: E(): 6.7e-12, 57.62% id in 59 aa, and to Neisseria meningitidis hypothetical protein nmb0542 SWALL:Q9K0P3 (EMBL:AE002410) (67 aa) fasta scores: E(): 4.1e-07, 44.06% id in 59 aa; hypothetical protein 920361 3092094 BPSL0792 Burkholderia pseudomallei K96243 hypothetical protein YP_107417.1 920164 R 272560 CDS YP_107418.1 53718432 3093889 complement(920427..921350) 1 NC_006350.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 921350 ilvE 3093889 ilvE Burkholderia pseudomallei K96243 branched-chain amino acid aminotransferase YP_107418.1 920427 R 272560 CDS YP_107419.1 53718433 3092095 921572..922321 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0568 or rs04897 SWALL:Q8Y1W9 (EMBL:AL646060) (265 aa) fasta scores: E(): 2.7e-49, 59.18% id in 245 aa. Weakly similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0513 or rs04992 SWALL:Q8Y223 (EMBL:AL646059) (242 aa) fasta scores: E(): 3.5e-15, 28.2% id in 234 aa; AzlC family protein 922321 3092095 BPSL0794 Burkholderia pseudomallei K96243 AzlC family protein YP_107419.1 921572 D 272560 CDS YP_107420.1 53718434 3091983 922318..922641 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0569 or rs04896 SWALL:Q8Y1W8 (EMBL:AL646060) (107 aa) fasta scores: E(): 8.6e-16, 50.47% id in 105 aa; hypothetical protein 922641 3091983 BPSL0795 Burkholderia pseudomallei K96243 hypothetical protein YP_107420.1 922318 D 272560 CDS YP_107421.1 53718435 3092746 922908..924101 1 NC_006350.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 924101 pgk 3092746 pgk Burkholderia pseudomallei K96243 phosphoglycerate kinase YP_107421.1 922908 D 272560 CDS YP_107422.1 53718436 3093639 924436..925872 1 NC_006350.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 925872 pykA 3093639 pykA Burkholderia pseudomallei K96243 pyruvate kinase YP_107422.1 924436 D 272560 CDS YP_107423.1 53718437 3092411 926153..927217 1 NC_006350.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 927217 cbbA 3092411 cbbA Burkholderia pseudomallei K96243 fructose-1,6-bisphosphate aldolase YP_107423.1 926153 D 272560 CDS YP_107424.1 53718438 3094817 927407..928297 1 NC_006350.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 928297 hemH 3094817 hemH Burkholderia pseudomallei K96243 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_107424.1 927407 D 272560 CDS YP_107425.1 53718439 3092356 928333..928851 1 NC_006350.1 Similar to Bacillus subtilis phosphoribosylaminoimidazole carboxylase catalytic subunit PurE SWALL:PUR6_BACSU (SWALL:P12044) (162 aa) fasta scores: E(): 1.2e-32, 67.58% id in 145 aa, and to Ralstonia solanacearum probable phosphoribosylaminoimidazole carboxylase catalytic subunit protein rsc0575 or rs04890 SWALL:Q8Y1W2 (EMBL:AL646060) (169 aa) fasta scores: E(): 6.3e-42, 74.07% id in 162 aa; phosphoribosylaminoimidazole carboxylase catalytic subunit 928851 purE 3092356 purE Burkholderia pseudomallei K96243 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_107425.1 928333 D 272560 CDS YP_107426.1 53718440 3091911 928931..930127 1 NC_006350.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 930127 purK 3091911 purK Burkholderia pseudomallei K96243 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_107426.1 928931 D 272560 CDS YP_107427.1 53718441 3091984 930139..931164 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0577 or rs04888 SWALL:Q8Y1W0 (EMBL:AL646060) (336 aa) fasta scores: E(): 3e-68, 64.16% id in 346 aa, and to Thermomonospora fusca hypothetical protein SWALL:Q9XCD2 (EMBL:AF144563) (335 aa) fasta scores: E(): 4.4e-41, 49.24% id in 331 aa; hypothetical protein 931164 3091984 BPSL0802 Burkholderia pseudomallei K96243 hypothetical protein YP_107427.1 930139 D 272560 CDS YP_107428.1 53718442 3094179 complement(931480..932619) 1 NC_006350.1 Similar to Ralstonia solanacearum lipase / esterase rsc0580 or rs04885 SWALL:Q8Y1V9 (EMBL:AL646060) (347 aa) fasta scores: E(): 0.00034, 44.07% id in 363 aa. C-terminal region is similar to the N-terminal region of Acidiphilium sp. AIU409 esterase estA SWALL:Q9WXJ8 (EMBL:AB026254) (627 aa) fasta scores: E(): 0.00055, 29.79% id in 339 aa; acylhydrolase 932619 3094179 BPSL0803 Burkholderia pseudomallei K96243 acylhydrolase YP_107428.1 931480 R 272560 CDS YP_107429.1 53718443 3094180 complement(932724..933641) 1 NC_006350.1 Similar to Caulobacter crescentus hypothetical protein cc1444 SWALL:Q9A8B0 (EMBL:AE005819) (300 aa) fasta scores: E(): 6e-41, 40.79% id in 277 aa, and to Rhizobium loti hypothetical protein mll1065 SWALL:Q98LE0 (EMBL:AP002996) (317 aa) fasta scores: E(): 7.1e-40, 43.38% id in 272 aa; Upstream repeat region (cggcgagggaaacggcgagggaaacggcgagggaaa)3; hypothetical protein 933641 3094180 BPSL0804 Burkholderia pseudomallei K96243 hypothetical protein YP_107429.1 932724 R 272560 CDS YP_107430.1 53718444 3093045 complement(934041..935492) 1 NC_006350.1 Weakly similar to Escherichia coli penicillin-binding protein 4 precursor DacB or b3182 SWALL:PBP4_ECOLI (SWALL:P24228) (477 aa) fasta scores: E(): 2.3e-23, 26.06% id in 422 aa. Similar to Ralstonia solanacearum probable D-alanyl-D-alanine carboxypeptidase signal peptide protein rsc0584 or rs04879 SWALL:Q8Y1V5 (EMBL:AL646060) (514 aa) fasta scores: E(): 1.3e-86, 54.25% id in 494 aa; Downstream repeat region (cggcgagggaaacggcgagggaaacggcgagggaaa)3; peptidase 935492 3093045 BPSL0805 Burkholderia pseudomallei K96243 peptidase YP_107430.1 934041 R 272560 CDS YP_107431.1 53718445 3093046 935760..936422 1 NC_006350.1 Two-component regulatory system family, response regulator protein. Similar to Escherichia coli transcriptional regulatory protein QseB SWALL:QSEB_ECOLI (SWALL:P52076) (219 aa) fasta scores: E(): 9.3e-39, 53.27% id in 214 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc3404 or rs01713 SWALL:Q8XTZ1 (EMBL:AL646075) (221 aa) fasta scores: E(): 2.9e-46, 60.73% id in 219 aa; response regulator protein 936422 3093046 BPSL0806 Burkholderia pseudomallei K96243 response regulator protein YP_107431.1 935760 D 272560 CDS YP_107432.1 53718446 3092687 936426..937742 1 NC_006350.1 Similar to Escherichia coli sensor protein QseC SWALL:QSEC_ECOLI (SWALL:P40719) (449 aa) fasta scores: E(): 4.1e-30, 31.04% id in 451 aa, and to Ralstonia solanacearum probable transmembrane two-component sensor kinase transcription regulator protein rsp1553 or rs02109 SWALL:Q8XPT4 (EMBL:AL646085) (438 aa) fasta scores: E(): 3e-69, 50.22% id in 438 aa; sensor kinase 937742 3092687 BPSL0807 Burkholderia pseudomallei K96243 sensor kinase YP_107432.1 936426 D 272560 CDS YP_107433.1 53718447 3092688 938273..939691 1 NC_006350.1 Similar to Pseudomonas aeruginosa serine protease MucD or pa0766 SWALL:Q57155 (EMBL:U49151) (474 aa) fasta scores: E(): 1.8e-70, 47.43% id in 468 aa, and to Ralstonia solanacearum probable protease signal peptide protein rsp1552 or rs02108 SWALL:Q8XPT5 (EMBL:AL646085) (490 aa) fasta scores: E(): 2.4e-89, 58.99% id in 478 aa; peptidase 939691 3092688 BPSL0808 Burkholderia pseudomallei K96243 peptidase YP_107433.1 938273 D 272560 CDS YP_107434.1 53718448 3093613 939851..940273 1 NC_006350.1 Similar to Ralstonia solanacearum signal peptide protein rsc1315 or rs02837 SWALL:Q8XZT0 (EMBL:AL646063) (141 aa) fasta scores: E(): 3.6e-06, 33.57% id in 137 aa; hypothetical protein 940273 3093613 BPSL0809 Burkholderia pseudomallei K96243 hypothetical protein YP_107434.1 939851 D 272560 CDS YP_107435.1 53718449 3093614 940401..940766 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0235 or rs00667 SWALL:Q8Y2U7 (EMBL:AL646058) (118 aa) fasta scores: E(): 4.1e-11, 40.9% id in 110 aa, and to Rhizobium meliloti hypothetical protein rb0957 rb0957 or smb21379 SWALL:Q92UX8 (EMBL:AL603645) (124 aa) fasta scores: E(): 7.2e-10, 39.28% id in 112 aa; hypothetical protein 940766 3093614 BPSL0810 Burkholderia pseudomallei K96243 hypothetical protein YP_107435.1 940401 D 272560 CDS YP_107436.1 53718450 3093565 940794..941522 1 NC_006350.1 Hits of low significance from the databases. Weakly similar to Ralstonia solanacearum probable transmembrane protein rsc1464 or rs03843 SWALL:Q8XZD7 (EMBL:AL646064) (213 aa) fasta scores: E(): 0.0012, 30.25% id in 238 aa; hypothetical protein 941522 3093565 BPSL0811 Burkholderia pseudomallei K96243 hypothetical protein YP_107436.1 940794 D 272560 CDS YP_107437.1 53718451 3094029 complement(941844..942479) 1 NC_006350.1 Similar to Escherichia coli potential acrAB operon repressor AcrR SWALL:ACRR_ECOLI (SWALL:P34000) (215 aa) fasta scores: E(): 1.2e-22, 38.75% id in 209 aa, and to Ralstonia solanacearum acrAB operon repressor transcription regulator protein rsc0012 or rs01834 SWALL:Q8Y3G8 (EMBL:AL646057) (219 aa) fasta scores: E(): 6e-34, 47.84% id in 209 aa; TetR family regulatory protein 942479 bpeR 3094029 bpeR Burkholderia pseudomallei K96243 TetR family regulatory protein YP_107437.1 941844 R 272560 CDS YP_107438.1 53718452 3094743 942889..944151 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor acrA or MtcA or Lir SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 5.5e-60, 53.76% id in 385 aa, and to Ralstonia solanacearum probable acriflavin resistance lipoprotein A precursor rsc0011 or rs01833 SWALL:Q8Y3G9 (EMBL:AL646057) (398 aa) fasta scores: E(): 6.6e-61, 55.22% id in 402 aa; RND family acriflavine resistance protein A 944151 bpeA 3094743 bpeA Burkholderia pseudomallei K96243 RND family acriflavine resistance protein A YP_107438.1 942889 D 272560 CDS YP_107439.1 53718453 3094744 944167..947367 1 NC_006350.1 Similar to Escherichia coli acriflavine resistance protein B AcrB or AcrE or b0462 SWALL:ACRB_ECOLI (SWALL:P31224) (1049 aa) fasta scores: E(): 0, 66.63% id in 1049 aa, and to Klebsiella pneumoniae AcrB protein SWALL:Q93K40 (EMBL:AJ318073) (1048 aa) fasta scores: E(): 0, 66.79% id in 1048 aa; RND family acriflavine resistance protein 947367 bpeB 3094744 bpeB Burkholderia pseudomallei K96243 RND family acriflavine resistance protein YP_107439.1 944167 D 272560 CDS YP_107440.1 53718454 3093418 947371..948915 1 NC_006350.1 Similar to Pseudomonas aeruginosa outer membrane protein OprM precursor pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 4.1e-85, 55.67% id in 476 aa, and to Xanthomonas axonopodis outer membrane protein xac2842 SWALL:AAM37687 (EMBL:AE011925) (503 aa) fasta scores: E(): 5.8e-84, 53.72% id in 497 aa; outer membrane efflux protein 948915 oprB 3093418 oprB Burkholderia pseudomallei K96243 outer membrane efflux protein YP_107440.1 947371 D 272560 CDS YP_107441.1 53718455 3093566 complement(949498..950943) 1 NC_006350.1 Similar to Bacillus subtilis xanthine permease PbuX SWALL:PBUX_BACSU (SWALL:P42086) (438 aa) fasta scores: E(): 3.3e-72, 48.67% id in 415 aa, and to Escherichia coli purine permease YgfU or b2888 SWALL:YGFU_ECOLI (SWALL:Q46821) (482 aa) fasta scores: E(): 9.1e-97, 59.03% id in 437 aa; permease 950943 3093566 BPSL0817 Burkholderia pseudomallei K96243 permease YP_107441.1 949498 R 272560 CDS YP_107442.1 53718456 3094111 951272..952696 1 NC_006350.1 Similar to Escherichia coli xylulose kinase XylB or b3564 SWALL:XYLB_ECOLI (SWALL:P09099) (484 aa) fasta scores: E(): 2.8e-24, 34.3% id in 481 aa, and to Rhizobium meliloti sugar kinase r02569 or smc02341 SWALL:Q92MP4 (EMBL:AL591791) (477 aa) fasta scores: E(): 2.7e-37, 41.5% id in 477 aa; sugar kinase 952696 3094111 BPSL0818 Burkholderia pseudomallei K96243 sugar kinase YP_107442.1 951272 D 272560 CDS YP_107443.1 53718457 3094112 complement(952965..953999) 1 NC_006350.1 Similar to Streptomyces griseus A-factor-responsive transcriptional activator AdpA SWALL:Q9S166 (EMBL:AB023785) (405 aa) fasta scores: E(): 2.1e-30, 36.33% id in 322 aa, and to Streptomyces coelicolor transcriptional regulator sco6746 or sc5f2a.29 SWALL:Q9X7Q2 (EMBL:AL049587) (325 aa) fasta scores: E(): 2.9e-43, 41.94% id in 329 aa; Alternative start site at codon 33; upstream repeat region (ggcgc)3; AraC family transcriptional regulator 953999 3094112 BPSL0819 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_107443.1 952965 R 272560 CDS YP_107444.1 53718458 3091474 954204..955310 1 NC_006350.1 Similar to Paracoccus denitrificans glutathione-dependent formaldehyde dehydrogenase FlhA SWALL:FADH_PARDE (SWALL:P45382) (375 aa) fasta scores: E(): 1e-108, 75.2% id in 375 aa, and to Ralstonia solanacearum probable bifunctional: glutathione-dependent formaldehyde dehydrogenase and alcohol dehydrogenase class III oxidoreductase AdhC1 or rsp0069 or rs02044 SWALL:Q8XTN7 (EMBL:AL646076) (368 aa) fasta scores: E(): 4e-128, 88.04% id in 368 aa; Upstream repeat region (ggcgc)3; glutathione-dependent formaldehyde dehydrogenase 955310 flhA 3091474 flhA Burkholderia pseudomallei K96243 glutathione-dependent formaldehyde dehydrogenase YP_107444.1 954204 D 272560 CDS YP_107445.1 53718459 3092671 955324..956184 1 NC_006350.1 Similar to Paracoccus denitrificans S-formylglutathione hydrolase FghA SWALL:Q51671 (EMBL:U34346) (279 aa) fasta scores: E(): 5.9e-55, 52.29% id in 283 aa, and to Ralstonia solanacearum probable hydrolase oxidoreductase rsc0604 or rs04840 SWALL:Q8Y1T5 (EMBL:AL646060) (289 aa) fasta scores: E(): 2.9e-77, 69.03% id in 281 aa; S-formylglutathione hydrolase 956184 fghA 3092671 fghA Burkholderia pseudomallei K96243 S-formylglutathione hydrolase YP_107445.1 955324 D 272560 CDS YP_107446.1 53718460 3094191 complement(956329..957120) 1 NC_006350.1 Similar to Mycobacterium leprae ABC-transporter transmembrane protein ml0335 SWALL:Q9CCW1 (EMBL:AL583918) (286 aa) fasta scores: E(): 6.6e-22, 35.63% id in 261 aa, and to Thermoanaerobacter tengcongensis ABC-type Mn2+/Zn2+ transport systems, permease components znuB or tte0361 SWALL:Q8RCQ5 (EMBL:AE013009) (263 aa) fasta scores: E(): 2.3e-20, 32.03% id in 256 aa; ABC transporter permease 957120 3094191 BPSL0822 Burkholderia pseudomallei K96243 ABC transporter permease YP_107446.1 956329 R 272560 CDS YP_107447.1 53718461 3094192 complement(957113..957985) 1 NC_006350.1 Similar to Mycobacterium leprae ABC-tranporter ATP-binding protein ml0336 SWALL:Q9CCW0 (EMBL:AL583918) (275 aa) fasta scores: E(): 4.4e-25, 43.6% id in 250 aa, and to Pyrococcus horikoshii hypothetical protein ph1653 SWALL:O59348 (EMBL:AP000006) (260 aa) fasta scores: E(): 1.1e-19, 33.2% id in 256 aa; ABC transporter ATP-binding protein 957985 3094192 BPSL0823 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_107447.1 957113 R 272560 CDS YP_107448.1 53718462 3094299 complement(958008..958883) 1 NC_006350.1 Similar to Yersinia pestis periplasmic chelated iron-binding protein YfeA or ypo2439 or y1897 SWALL:YFEA_YERPE (SWALL:Q56952) (311 aa) fasta scores: E(): 3.9e-08, 31.05% id in 219 aa, and to Mycobacterium tuberculosis hypothetical protein rv2059 or mtcy63a.01c or mt2119 SWALL:O07257 (EMBL:Z97984) (511 aa) fasta scores: E(): 2.2e-19, 34.41% id in 247 aa; periplasmic solute-binding protein 958883 3094299 BPSL0824 Burkholderia pseudomallei K96243 periplasmic solute-binding protein YP_107448.1 958008 R 272560 CDS YP_107449.1 53718463 3094300 complement(959141..959605) 1 NC_006350.1 Similar to Escherichia coli zinc uptake regulation protein Zur or b4046 SWALL:ZUR_ECOLI (SWALL:P32692) (171 aa) fasta scores: E(): 2.7e-12, 33.57% id in 137 aa, and to Pseudomonas aeruginosa transcriptional regulator Np20 or pa5499 SWALL:Q9HT74 (EMBL:AE004962) (167 aa) fasta scores: E(): 6e-21, 42.17% id in 147 aa. Possible alternative translational start sites; FUR family transcriptional regulator 959605 3094300 BPSL0825 Burkholderia pseudomallei K96243 FUR family transcriptional regulator YP_107449.1 959141 R 272560 CDS YP_107450.1 53718464 3093880 959899..960675 1 NC_006350.1 Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase 960675 3093880 BPSL0826 Burkholderia pseudomallei K96243 sorbitol dehydrogenase YP_107450.1 959899 D 272560 CDS YP_107451.1 53718465 3092279 960680..961636 1 NC_006350.1 Similar to Klebsiella pneumoniae fructokinase ScrK SWALL:SCRK_KLEPN (SWALL:P26420) (307 aa) fasta scores: E(): 9e-17, 33.91% id in 286 aa, and to Ralstonia solanacearum probable fructokinase CscK or rsc2146 or rs01457 SWALL:Q8XXG8 (EMBL:AL646068) (318 aa) fasta scores: E(): 3.1e-86, 74.52% id in 318 aa, and to Rhizobium loti fructokinase mll7216 SWALL:Q986T6 (EMBL:AP003011) (317 aa) fasta scores: E(): 1.6e-41, 42.81% id in 320 aa; fructokinase 961636 scrK 3092279 scrK Burkholderia pseudomallei K96243 fructokinase YP_107451.1 960680 D 272560 CDS YP_107452.1 53718466 3093881 961624..963120 1 NC_006350.1 Similar to Escherichia coli tagatose 6-phosphate kinase agaZ or KbaZ or b3132 SWALL:AGAZ_ECOLI (SWALL:P42903) (426 aa) fasta scores: E(): 5.8e-30, 47.4% id in 481 aa, and to Ralstonia solanacearum tagatose 6-phosphate kinase rsc2145 or rs01458 SWALL:Q8XXG9 (EMBL:AL646068) (451 aa) fasta scores: E(): 1.7e-61, 65.85% id in 495 aa. Possible alternative translational start site; tagatose 6-phosphate kinase 963120 3093881 BPSL0828 Burkholderia pseudomallei K96243 tagatose 6-phosphate kinase YP_107452.1 961624 D 272560 CDS YP_107453.1 53718467 3093412 963171..964499 1 NC_006350.1 Similar to Ralstonia solanacearum probable sugar-binding periplasmic signal peptide protein rsc2144 or rs01459 SWALL:Q8XXH0 (EMBL:AL646068) (441 aa) fasta scores: E(): 6.6e-158, 89.14% id in 442 aa, and to Agrobacterium tumefaciens ABC transporter substrate binding protein atu3165 or agr_l_3289 SWALL:Q8UB52 (EMBL:AE009246) (450 aa) fasta scores: E(): 2.2e-105, 61.15% id in 417 aa; periplasmic ABC transporter substrate-binding component 964499 3093412 BPSL0829 Burkholderia pseudomallei K96243 periplasmic ABC transporter substrate-binding component YP_107453.1 963171 D 272560 CDS YP_107454.1 53718468 3093413 964607..965551 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc2143 or rs01460 SWALL:Q8XXH1 (EMBL:AL646068) (317 aa) fasta scores: E(): 1.5e-103, 84.12% id in 315 aa, and to Pseudomonas aeruginosa probable binding-protein-dependent maltose/mannitol transport protein pa2339 SWALL:Q9I1D9 (EMBL:AE004660) (310 aa) fasta scores: E(): 2.1e-70, 61.67% id in 287 aa, and to Rhodobacter capsulatus maltose transport inner membrane protein SWALL:O68115 (EMBL:AF010496) (290 aa) fasta scores: E(): 1.6e-69, 62.5% id in 280 aa; transmembrane ABC transporter protein 965551 3093413 BPSL0830 Burkholderia pseudomallei K96243 transmembrane ABC transporter protein YP_107454.1 964607 D 272560 CDS YP_107455.1 53718469 3093253 965548..966414 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc2142 or rs01461 SWALL:Q8XXH2 (EMBL:AL646068) (286 aa) fasta scores: E(): 1.1e-101, 90.62% id in 288 aa, and to Pseudomonas fluorescens probable ABC transporter permease MtlG SWALL:O30493 (EMBL:AF007800) (276 aa) fasta scores: E(): 3e-70, 65.67% id in 268 aa, and to Pseudomonas aeruginosa probable binding-protein-dependent maltose/mannitol transport protein pa2340 SWALL:Q9I1D8 (EMBL:AE004660) (277 aa) fasta scores: E(): 7.3e-70, 66.41% id in 268 aa; ABC transporter permease 966414 3093253 BPSL0831 Burkholderia pseudomallei K96243 ABC transporter permease YP_107455.1 965548 D 272560 CDS YP_107456.1 53718470 3093254 966411..967109 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2141 or rs01462 SWALL:Q8XXH3 (EMBL:AL646068) (232 aa) fasta scores: E(): 2.1e-58, 70.25% id in 232 aa, and to Pseudomonas aeruginosa probable hydrolase pa0562 SWALL:Q9I5X4 (EMBL:AE004492) (224 aa) fasta scores: E(): 9.9e-30, 47.08% id in 223 aa, and to Xanthomonas axonopodis hydrolase xac2883 SWALL:AAM37728 (EMBL:AE011930) (225 aa) fasta scores: E(): 2.4e-27, 45.87% id in 218 aa; haloacid dehalogenase hydrolase 967109 3093254 BPSL0832 Burkholderia pseudomallei K96243 haloacid dehalogenase hydrolase YP_107456.1 966411 D 272560 CDS YP_107457.1 53718471 3094475 967116..968282 1 NC_006350.1 Similar to Salmonella typhimurium maltose/maltodextrin transport ATP-binding protein MalK or stm4230 SWALL:MALK_SALTY (SWALL:P19566) (369 aa) fasta scores: E(): 2.6e-62, 54.14% id in 362 aa, and to Ralstonia solanacearum probable sugar ATP-binding ABC transporter protein rsc2140 or rs01463 SWALL:Q8XXH4 (EMBL:AL646068) (369 aa) fasta scores: E(): 1.1e-101, 83.51% id in 370 aa, and to Vibrio cholerae maltose/maltodextrin ABC transporter ATP-binding protein vca0946 SWALL:Q9KL04 (EMBL:AE004421) (373 aa) fasta scores: E(): 1.2e-64, 56.35% id in 362 aa; downstream repeat region (cccgccgc)3 and (cccgccgg)3; Alternative start site at codon 20; sugar ABC transporter protein 968282 3094475 BPSL0833 Burkholderia pseudomallei K96243 sugar ABC transporter protein YP_107457.1 967116 D 272560 CDS YP_107458.1 53718472 3094476 complement(968501..969802) 1 NC_006350.1 Similar to Clostridium perfringens hypothetical protein CPE0251 SWALL:Q8XNT1 (EMBL:AP003186) (440 aa) fasta scores: E(): 5e-55, 37.67% id in 422 aa. C-terminal region is similar to Fusobacterium nucleatum phosphoserine phosphatase FN0091 SWALL:Q8RH24 (EMBL:AE010523) (366 aa) fasta scores: E(): 2.5e-38, 35.69% id in 381 aa; downstream repeat region (cccgccgc)3 and (cccgccgg)3; hypothetical protein 969802 3094476 BPSL0834 Burkholderia pseudomallei K96243 hypothetical protein YP_107458.1 968501 R 272560 CDS YP_107459.1 53718473 3094509 complement(970247..971131) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2316 SWALL:Q9I1F9 (EMBL:AE004657) (297 aa) fasta scores: E(): 1.4e-77, 68.02% id in 294 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family atu4271 or agr_l_1183 SWALL:Q8U828 (EMBL:AE009356) (295 aa) fasta scores: E(): 4.5e-54, 50% id in 294 aa, and to Rhizobium loti transcriptional regulator mll2784 SWALL:Q98HN8 (EMBL:AP003000) (307 aa) fasta scores: E(): 4.1e-53, 50.5% id in 295 aa; downstream repeat region (gcg)4; LysR family transcriptional regulator 971131 3094509 BPSL0835 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107459.1 970247 R 272560 CDS YP_107460.1 53718474 3094510 971269..972465 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2315 SWALL:Q9I1G0 (EMBL:AE004657) (391 aa) fasta scores: E(): 6.8e-89, 67.63% id in 380 aa. C-terminal region is similar to Pseudomonas sp triacylglycerol lipase Lip-1 SWALL:Q9KX30 (EMBL:X61673) (333 aa) fasta scores: E(): 3.2e-76, 66.06% id in 333 aa; peptidase 972465 3094510 BPSL0836 Burkholderia pseudomallei K96243 peptidase YP_107460.1 971269 D 272560 CDS YP_107461.1 53718475 3094834 972462..973673 1 NC_006350.1 Similar to Erwinia chrysanthemi sugar efflux transporter B SotB SWALL:SOTB_ERWCH (SWALL:Q9S3J9) (395 aa) fasta scores: E(): 5e-23, 29.59% id in 392 aa, and to Pseudomonas aeruginosa probable MFS transporter pa2314 SWALL:Q9I1G1 (EMBL:AE004657) (417 aa) fasta scores: E(): 5.6e-69, 55.52% id in 389 aa; downstream repeat region (gtccgtccggc)3; transporter protein 973673 3094834 BPSL0837 Burkholderia pseudomallei K96243 transporter protein YP_107461.1 972462 D 272560 CDS YP_107462.1 53718476 3094835 complement(973846..974793) 1 NC_006350.1 Similar to Bacillus subtilis deoxyribonucleoside regulator DeoR SWALL:DEOR_BACSU (SWALL:P39140) (313 aa) fasta scores: E(): 2.3e-15, 29.74% id in 316 aa, and to Ralstonia solanacearum transcriptional regulator rsc2127 or rs01506 SWALL:Q8XXI6 (EMBL:AL646068) (315 aa) fasta scores: E(): 7.7e-100, 84.98% id in 313 aa, and to Yersinia pestis transcriptional regulatory protein ypo2324 SWALL:Q8ZE59 (EMBL:AJ414152) (318 aa) fasta scores: E(): 6.9e-63, 54.6% id in 315 aa; downstream repeat region (gtccgtccggc)3; transcriptional regulator 974793 3094835 BPSL0838 Burkholderia pseudomallei K96243 transcriptional regulator YP_107462.1 973846 R 272560 CDS YP_107463.1 53718477 3092433 complement(974880..976361) 1 NC_006350.1 Similar to Klebsiella pneumoniae D-xylulose-kinase DalK SWALL:O52719 (EMBL:AF045245) (487 aa) fasta scores: E(): 1.5e-108, 60.87% id in 478 aa, and to Ralstonia solanacearum D-arabinitol kinase rsc2128 or rs01476 SWALL:Q8XXI5 (EMBL:AL646068) (491 aa) fasta scores: E(): 1.7e-154, 82.15% id in 493 aa, and to Escherichia coli xylulose kinase xylB or b3564 SWALL:XYLB_ECOLI (SWALL:P09099) (484 aa) fasta scores: E(): 1.4e-92, 53.68% id in 488 aa; carbohydrate kinase 976361 dalK 3092433 dalK Burkholderia pseudomallei K96243 carbohydrate kinase YP_107463.1 974880 R 272560 CDS YP_107464.1 53718478 3092432 complement(976472..977914) 1 NC_006350.1 Similar to Klebsiella pneumoniae D-arabinitol 4-dehydrogenase DalD SWALL:DALD_KLEPN (SWALL:O52720) (455 aa) fasta scores: E(): 4.8e-98, 55.95% id in 445 aa, and to Ralstonia solanacearum D-arabinitol 4-dehydrogenase rsc2129 or rs01475 SWALL:DALD_RALSO (SWALL:P58708) (465 aa) fasta scores: E(): 2.5e-147, 78.66% id in 464 aa, and to Yersinia pestis D-arabinitol 4-dehydrogenase ypo2325 or y2008 SWALL:DALD_YERPE (SWALL:P58709) (463 aa) fasta scores: E(): 2.2e-102, 56.58% id in 463 aa. Possible alternative translational start site after codon 17; D-arabinitol 4-dehydrogenase 977914 dalD 3092432 dalD Burkholderia pseudomallei K96243 D-arabinitol 4-dehydrogenase YP_107464.1 976472 R 272560 CDS YP_107465.1 53718479 3094739 complement(978086..979000) 1 NC_006350.1 Similar to Bacillus subtilis transcriptional regulatory protein GltC SWALL:GLTC_BACSU (SWALL:P20668) (300 aa) fasta scores: E(): 3.6e-16, 28.32% id in 286 aa, and to Streptomyces coelicolor LysR-family transcriptional regulator sco0925 or scm10.13 SWALL:Q9RCY5 (EMBL:AL133469) (294 aa) fasta scores: E(): 4.1e-18, 33.33% id in 300 aa; LysR family transcriptional regulator 979000 3094739 BPSL0841 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107465.1 978086 R 272560 CDS YP_107466.1 53718480 3094740 979101..980720 1 NC_006350.1 catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase 980720 3094740 BPSL0842 Burkholderia pseudomallei K96243 benzoylformate decarboxylase YP_107466.1 979101 D 272560 CDS YP_107467.1 53718481 3092711 980842..982293 1 NC_006350.1 Similar to previously sequenced Burkholderia sp. RP007 dehydrogenase PhnF SWALL:Q9ZHH7 (EMBL:AF061751) (483 aa) fasta scores: E(): 1.1e-103, 61.41% id in 482 aa. Similar to Rhizobium loti dehydrogenase mll7197 SWALL:Q986V2 (EMBL:AP003011) (481 aa) fasta scores: E(): 1.7e-114, 66.73% id in 481 aa, and to Ralstonia solanacearum probable vanillin dehydrogenase oxidoreductase Vdh or rsp0226 or rs05197 SWALL:Q8XT89 (EMBL:AL646077) (484 aa) fasta scores: E(): 2.7e-111, 65.63% id in 483 aa; Alternative start site at codon 11; aldehyde dehydrogenase 982293 3092711 BPSL0843 Burkholderia pseudomallei K96243 aldehyde dehydrogenase YP_107467.1 980842 D 272560 CDS YP_107468.1 53718482 3092712 982322..983254 1 NC_006350.1 Similar to Escherichia coli 2-dehydropantoate 2-reductase PanE or ApbA or b0425 SWALL:PANE_ECOLI (SWALL:P77728) (303 aa) fasta scores: E(): 2.8e-07, 27.77% id in 306 aa, and to Salmonella typhimurium ketopantoate reductase stm2573 SWALL:Q8ZN23 (EMBL:AE008817) (305 aa) fasta scores: E(): 1.1e-30, 38.33% id in 313 aa, and to Salmonella typhi oxidoreductase sty2819 SWALL:Q8Z4L0 (EMBL:AL627275) (305 aa) fasta scores: E(): 1.8e-30, 39.17% id in 314 aa; ketopantoate reductase 983254 3092712 BPSL0844 Burkholderia pseudomallei K96243 ketopantoate reductase YP_107468.1 982322 D 272560 CDS YP_107469.1 53718483 3091896 983744..983977 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 983977 3091896 BPSL0844a Burkholderia pseudomallei K96243 hypothetical protein YP_107469.1 983744 D 272560 CDS YP_107470.1 53718484 3091897 983974..985368 1 NC_006350.1 Similar to Pseudomonas putida 4-hydroxybenzoate transporter PcaK SWALL:PCAK_PSEPU (SWALL:Q51955) (448 aa) fasta scores: E(): 6.3e-43, 36.14% id in 451 aa, and to Ralstonia solanacearum 4-hydroxybenzoate transporter transmembrane protein rsc1093 or rs04094 SWALL:Q8Y0F1 (EMBL:AL646062) (454 aa) fasta scores: E(): 6.2e-47, 36.02% id in 458 aa, and to Pseudomonas aeruginosa probable MFS transporter pa2472 SWALL:Q9I110 (EMBL:AE004675) (448 aa) fasta scores: E(): 1.7e-45, 37.13% id in 439 aa; transporter protein 985368 3091897 BPSL0845 Burkholderia pseudomallei K96243 transporter protein YP_107470.1 983974 D 272560 CDS YP_107471.1 53718485 3092668 complement(985394..986314) 1 NC_006350.1 Similar to Ralstonia solanacearum oxygenase oxidoreductase rsc0758 or rs05095 SWALL:Q8Y1D2 (EMBL:AL646060) (294 aa) fasta scores: E(): 1.2e-83, 71.13% id in 291 aa. Weakly similar to the N-terminal region of Homo sapiens tryptophan 2,3-dioxygenase TDO2 or TDO SWALL:T23O_HUMAN (SWALL:P48775) (406 aa) fasta scores: E(): 0.011, 28.15% id in 373 aa; tryptophan 2,3-dioxygenase 986314 3092668 BPSL0846 Burkholderia pseudomallei K96243 tryptophan 2,3-dioxygenase YP_107471.1 985394 R 272560 CDS YP_107472.1 53718486 3092669 complement(986413..987663) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2080 SWALL:Q9I235 (EMBL:AE004635) (416 aa) fasta scores: E(): 3.6e-112, 66.58% id in 416 aa, and to Ralstonia solanacearum probable hydrolase rsc0759 or rs05094 SWALL:Q8Y1D1 (EMBL:AL646060) (417 aa) fasta scores: E(): 1.3e-111, 67.95% id in 415 aa, and to Rattus norvegicus Kynureninase KynU SWALL:KYNU_RAT (SWALL:P70712) (464 aa) fasta scores: E(): 1.7e-13, 27.98% id in 436 aa, and to Streptomyces clavuligerus isopenicillin N epimerase CefD SWALL:CEFD_STRCL (SWALL:P18549) (397 aa) fasta scores: E(): 2.3e-07, 24.37% id in 402 aa; hypothetical protein 987663 3092669 BPSL0847 Burkholderia pseudomallei K96243 hypothetical protein YP_107472.1 986413 R 272560 CDS YP_107473.1 53718487 3094257 complement(987705..988346) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0760 or rs05093 SWALL:Q8Y1D0 (EMBL:AL646060) (209 aa) fasta scores: E(): 5.8e-59, 74.87% id in 207 aa, and to Pseudomonas aeruginosa hypothetical protein pa2081 SWALL:Q9I234 (EMBL:AE004635) (213 aa) fasta scores: E(): 5.4e-52, 67.15% id in 207 aa, and to Synechocystis sp. hypothetical protein slr2121 SWALL:P73988 (EMBL:D90911) (215 aa) fasta scores: E(): 4.9e-14, 29.32% id in 208 aa; hypothetical protein 988346 3094257 BPSL0848 Burkholderia pseudomallei K96243 hypothetical protein YP_107473.1 987705 R 272560 CDS YP_107474.1 53718488 3094258 988476..988979 1 NC_006350.1 Similar to Rhizobium meliloti leucine-responsive regulatory protein Lrp or r01568 or smc01223 SWALL:LRP_RHIME (SWALL:P56901) (156 aa) fasta scores: E(): 5.9e-19, 41.78% id in 146 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0761 or rs05092 SWALL:Q8Y1C9 (EMBL:AL646060) (176 aa) fasta scores: E(): 4.1e-37, 65.1% id in 149 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2082 SWALL:Q9I233 (EMBL:AE004636) (158 aa) fasta scores: E(): 1.7e-32, 62.06% id in 145 aa; transcription regulator AsnC 988979 3094258 BPSL0849 Burkholderia pseudomallei K96243 transcription regulator AsnC YP_107474.1 988476 D 272560 CDS YP_107475.1 53718489 3094784 complement(988966..989481) 1 NC_006350.1 Similar to Ralstonia solanacearum monooxygenase oxidoreductase rsc0763 or rs05090 SWALL:Q8Y1C7 (EMBL:AL646060) (191 aa) fasta scores: E(): 2.6e-42, 66.47% id in 170 aa, and to Agrobacterium tumefaciens nitrilotriacetate monooxygenase atu3277 or agr_l_3083 SWALL:Q8UAU0 (EMBL:AE009257) (175 aa) fasta scores: E(): 1.9e-23, 47.23% id in 163 aa. Similar to the N-terminal region of Chelatobacter heintzii nitrilotriacetate monooxygenase component B NtaB or NmoB SWALL:NTAB_CHEHE (SWALL:P54990) (322 aa) fasta scores: E(): 9.3e-20, 41.21% id in 165 aa.; hypothetical protein 989481 3094784 BPSL0850 Burkholderia pseudomallei K96243 hypothetical protein YP_107475.1 988966 R 272560 CDS YP_107476.1 53718490 3094785 989874..990431 1 NC_006350.1 Similar to Erwinia chrysanthemi peptide methionine sulfoxide reductase MsrA SWALL:MSRA_ERWCH (SWALL:Q9ZEQ8) (213 aa) fasta scores: E(): 1.7e-25, 46.87% id in 160 aa, and to Ralstonia solanacearum peptide methionine sulfoxide reductase rsc0764 or rs05089 SWALL:MSRA_RALSO (SWALL:Q8Y1C6) (191 aa) fasta scores: E(): 2.9e-43, 60.21% id in 186 aa, and to Deinococcus radiodurans peptide methionine sulfoxide reductase dr1849 SWALL:MSRA_DEIRA (SWALL:Q9RTB6) (206 aa) fasta scores: E(): 8.3e-40, 56.18% id in 178 aa; peptide methionine sulfoxide reductase 990431 3094785 BPSL0851 Burkholderia pseudomallei K96243 peptide methionine sulfoxide reductase YP_107476.1 989874 D 272560 CDS YP_107477.1 53718491 3092924 complement(990788..991951) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0765 or rs05088 SWALL:Q8Y1C5 (EMBL:AL646060) (355 aa) fasta scores: E(): 3.2e-54, 53.46% id in 346 aa. Alternative start at codon 80; hypothetical protein 991951 3092924 BPSL0852 Burkholderia pseudomallei K96243 hypothetical protein YP_107477.1 990788 R 272560 CDS YP_107478.1 53718492 3092925 complement(992374..993594) 1 NC_006350.1 Similar to Ralstonia solanacearum cyclopropane-fatty-acyl-phospholipid synthase Cfa2 or rsc0766 or rs05087 SWALL:Q8Y1C4 (EMBL:AL646060) (406 aa) fasta scores: E(): 1.5e-111, 68.84% id in 398 aa, and to Pseudomonas aeruginosa hypothetical protein pa5546 SWALL:Q9HT28 (EMBL:AE004967) (394 aa) fasta scores: E(): 1.6e-73, 49.11% id in 397 aa, and to Pseudomonas putida hypothetical protein SWALL:YLP3_PSEPU (SWALL:P31049) (394 aa) fasta scores: E(): 7.8e-67, 45.83% id in 384 aa; Upstream repeat (ccgc)3 and downstream repeat (gcg)4; cyclopropane-fatty-acyl-phospholipid synthase 993594 3092925 BPSL0853 Burkholderia pseudomallei K96243 cyclopropane-fatty-acyl-phospholipid synthase YP_107478.1 992374 R 272560 CDS YP_107479.2 161723209 3094226 complement(993726..994370) 1 NC_006350.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 994370 pdxH 3094226 pdxH Burkholderia pseudomallei K96243 pyridoxamine 5'-phosphate oxidase YP_107479.2 993726 R 272560 CDS YP_107480.1 53718494 3091819 994504..995370 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0774 or rs05080 SWALL:Q8Y1B6 (EMBL:AL646061) (300 aa) fasta scores: E(): 4.9e-51, 60.48% id in 291 aa, and to Salmonella typhimurium paral enzyme stm2987 SWALL:Q8ZMC1 (EMBL:AE008837) (268 aa) fasta scores: E(): 7.7e-50, 53.33% id in 270 aa; ThiF family protein 995370 3091819 BPSL0855 Burkholderia pseudomallei K96243 ThiF family protein YP_107480.1 994504 D 272560 CDS YP_107481.1 53718495 3091820 complement(995643..996548) 1 NC_006350.1 Similar to Ralstonia solanacearum thioredoxin protein rsc0779 or rs05075 SWALL:Q8Y1B1 (EMBL:AL646061) (280 aa) fasta scores: E(): 2.9e-54, 55.51% id in 281 aa, and to Pseudomonas aeruginosa probable thioredoxin pa4061 SWALL:Q9HWW7 (EMBL:AE004822) (289 aa) fasta scores: E(): 1e-32, 42.1% id in 285 aa, and to Xanthomonas axonopodis thioredoxin xac2783 SWALL:AAM37628 (EMBL:AE011919) (286 aa) fasta scores: E(): 9.5e-32, 41.07% id in 280 aa; thioredoxin protein 996548 3091820 BPSL0856 Burkholderia pseudomallei K96243 thioredoxin protein YP_107481.1 995643 R 272560 CDS YP_107482.1 53718496 3093200 complement(996545..997426) 1 NC_006350.1 Similar to Streptomyces coelicolor hypothetical protein sco0881 or scm1.14C SWALL:Q9RD29 (EMBL:AL133422) (321 aa) fasta scores: E(): 3.4e-32, 38.98% id in 295 aa, and to Pseudomonas aeruginosa hypothetical protein pa1205 SWALL:YC05_PSEAE (SWALL:Q9I4D3) (315 aa) fasta scores: E(): 8e-32, 40.07% id in 257 aa, and to Streptomyces coelicolor hypothetical protein sco7729 or sc8d11.20 SWALL:Q9AJZ9 (EMBL:AL512944) (332 aa) fasta scores: E(): 1.7e-28, 37.36% id in 281 aa, and to Mus musculus pirin PIR SWALL:PIR_MOUSE (SWALL:Q9D711) (290 aa) fasta scores: E(): 8e-18, 31.14% id in 289 aa; hypothetical protein 997426 3093200 BPSL0857 Burkholderia pseudomallei K96243 hypothetical protein YP_107482.1 996545 R 272560 CDS YP_107483.1 53718497 3093201 997611..998495 1 NC_006350.1 Similar to Salmonella typhimurium probable amino acid metabolite efflux pump EamA or stm1517 SWALL:EAMA_SALTY (SWALL:Q56072) (299 aa) fasta scores: E(): 1.4e-53, 53.92% id in 293 aa, and to Ralstonia solanacearum hypothetical transmembrane protein rsc3261 or rs02490 SWALL:Q8XUD0 (EMBL:AL646074) (308 aa) fasta scores: E(): 5.3e-65, 63.54% id in 299 aa, and to Salmonella typhi membrane protein sty1543 SWALL:Q8Z701 (EMBL:AL627270) (300 aa) fasta scores: E(): 1.2e-53, 53.92% id in 293 aa; permease 998495 3093201 BPSL0858 Burkholderia pseudomallei K96243 permease YP_107483.1 997611 D 272560 CDS YP_107484.1 53718498 3091520 complement(999015..1000559) 1 NC_006350.1 Similar to Escherichia coli N-acetylmuramoyl-L-alanine amidase AmiC or b2817 SWALL:AMIC_ECOLI (SWALL:Q46929) (417 aa) fasta scores: E(): 1.3e-34, 42.85% id in 490 aa, and to Ralstonia solanacearum probable N-acetylmuramoyl-L-alanine amidase rsc2539 or rs00715 SWALL:Q8XWD5 (EMBL:AL646070) (507 aa) fasta scores: E(): 2.1e-52, 57.39% id in 521 aa, and to Yersinia pestis N-acetylmuramoyl-L-alanine amidase ypo1023 SWALL:Q8ZH85 (EMBL:AJ414146) (416 aa) fasta scores: E(): 4.9e-36, 41.36% id in 498 aa; N-acetylmuramoyl-L-alanine amidase 1000559 3091520 BPSL0859 Burkholderia pseudomallei K96243 N-acetylmuramoyl-L-alanine amidase YP_107484.1 999015 R 272560 CDS YP_107485.1 53718499 3091521 complement(1000553..1001107) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2540 or rs00716 SWALL:Q8XWD4 (EMBL:AL646070) (198 aa) fasta scores: E(): 8.5e-29, 58.28% id in 163 aa, and to Salmonella typhi hypothetical protein sty4714 SWALL:Q8Z189 (EMBL:AL627283) (153 aa) fasta scores: E(): 5.3e-20, 48.79% id in 166 aa, and to Salmonella typhimurium nucleotide-binding protein stm4357 SWALL:Q8ZKA6 (EMBL:AE008904) (153 aa) fasta scores: E(): 8.1e-20, 48.19% id in 166 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein b4168 or z5775 or ecs5144 SWALL:YJEE_ECOLI (SWALL:P31805) (153 aa) fasta scores: E(): 2.2e-19, 48.79% id in 166 aa; hydrolase 1001107 3091521 BPSL0860 Burkholderia pseudomallei K96243 hydrolase YP_107485.1 1000553 R 272560 CDS YP_107486.1 53718500 3093656 1001125..1002354 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4950 SWALL:Q9HUL4 (EMBL:AE004908) (361 aa) fasta scores: E(): 7.6e-57, 59.15% id in 377 aa, and to Yersinia pestis iron-sulfur cluster-binding protein ypo0367 SWALL:Q8ZIW8 (EMBL:AJ414142) (411 aa) fasta scores: E(): 1e-42, 47.18% id in 409 aa, and to Ralstonia solanacearum iron-sulfur 4Fe-4S ferredoxin protein rsc2541 or rs00718 SWALL:Q8XWD3 (EMBL:AL646070) (360 aa) fasta scores: E(): 8.8e-39, 64.45% id in 377 aa. Possible alternative translational start site; 4Fe-4S cluster-binding ferredoxin protein 1002354 3093656 BPSL0861 Burkholderia pseudomallei K96243 4Fe-4S cluster-binding ferredoxin protein YP_107486.1 1001125 D 272560 CDS YP_107487.1 53718501 3093657 1002367..1002891 1 NC_006350.1 Similar to Salmonella typhimurium, and Salmonella typhi methylated-DNA--protein-cysteine methyltransferase Ogt or stm1659 or sty1405 SWALL:OGT_SALTY (SWALL:P37429) (171 aa) fasta scores: E(): 2.7e-12, 43.18% id in 132 aa, and to Ralstonia solanacearum probable methylated-DNA--protein-cysteine methyltransferase rsc2543 or rs00722 SWALL:Q8XWD1 (EMBL:AL646070) (173 aa) fasta scores: E(): 2.6e-38, 57.31% id in 164 aa, and to Chlorobium tepidum methylated-DNA-protein-cysteine methyltransferase ct1289 SWALL:AAM72519 (EMBL:AE012888) (165 aa) fasta scores: E(): 1.2e-15, 39.86% id in 148 aa; methylated-DNA--protein-cysteine methyltransferase 1002891 3093657 BPSL0862 Burkholderia pseudomallei K96243 methylated-DNA--protein-cysteine methyltransferase YP_107487.1 1002367 D 272560 CDS YP_107488.2 161723208 3092584 1002975..1003892 1 NC_006350.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 1003892 xerD 3092584 xerD Burkholderia pseudomallei K96243 site-specific tyrosine recombinase XerD YP_107488.2 1002975 D 272560 CDS YP_107489.1 53718503 3093176 complement(1004177..1005742) 1 NC_006350.1 Similar to Streptomyces coelicolor probable long-chain-fatty-acid-CoA ligase sco6968 or sc6f7.21 SWALL:Q9KZC1 (EMBL:AL353870) (511 aa) fasta scores: E(): 2.7e-47, 37.37% id in 511 aa, and to Thermoanaerobacter tengcongensis acyl-CoA synthetases tte1960 SWALL:Q8R8N5 (EMBL:AE013147) (495 aa) fasta scores: E(): 2.8e-44, 33.53% id in 489 aa; AMP-binding enzyme 1005742 3093176 BPSL0864 Burkholderia pseudomallei K96243 AMP-binding enzyme YP_107489.1 1004177 R 272560 CDS YP_107490.1 53718504 3093177 1005872..1006363 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2545 or rs00724 SWALL:Q8XWC9 (EMBL:AL646070) (163 aa) fasta scores: E(): 7.9e-50, 76.39% id in 161 aa, and to Neisseria meningitidis hypothetical protei nma1462 SWALL:Q9JU74 (EMBL:AL162756) (159 aa) fasta scores: E(): 3.5e-30, 49.36% id in 158 aa, and to Neisseria meningitidis hypothetical protein nmb1026 SWALL:Q9JZJ3 (EMBL:AE002453) (159 aa) fasta scores: E(): 4.8e-30, 49.36% id in 158 aa; hypothetical protein 1006363 3093177 BPSL0865 Burkholderia pseudomallei K96243 hypothetical protein YP_107490.1 1005872 D 272560 CDS YP_107491.1 53718505 3094044 1006472..1007083 1 NC_006350.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 1007083 3094044 BPSL0866 Burkholderia pseudomallei K96243 glycerol-3-phosphate acyltransferase PlsY YP_107491.1 1006472 D 272560 CDS YP_107492.1 53718506 3094045 complement(1007313..1007798) 1 NC_006350.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 1007798 3094045 BPSL0867 Burkholderia pseudomallei K96243 nucleotide-binding protein YP_107492.1 1007313 R 272560 CDS YP_107493.1 53718507 3091554 1007935..1008984 1 NC_006350.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1008984 murB 3091554 murB Burkholderia pseudomallei K96243 UDP-N-acetylenolpyruvoylglucosamine reductase YP_107493.1 1007935 D 272560 CDS YP_107494.1 53718508 3092982 complement(1009176..1010105) 1 NC_006350.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1010105 argF 3092982 argF Burkholderia pseudomallei K96243 ornithine carbamoyltransferase YP_107494.1 1009176 R 272560 CDS YP_107495.1 53718509 3093781 1010519..1010854 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2555 or rs00734 SWALL:Q8XWB9 (EMBL:AL646070) (117 aa) fasta scores: E(): 4.7e-20, 56.25% id in 96 aa, and to Neisseria meningitidis hypothetical protein nma0169 SWALL:Q9JWY5 (EMBL:AL162752) (280 aa) fasta scores: E(): 1e-11, 45.16% id in 93 aa, and to Neisseria meningitidis phno-related protein nmb0105 SWALL:Q9K1L0 (EMBL:AE002369) (280 aa) fasta scores: E(): 1.2e-11, 45.16% id in 93 aa; hypothetical protein 1010854 3093781 BPSL0870 Burkholderia pseudomallei K96243 hypothetical protein YP_107495.1 1010519 D 272560 CDS YP_107496.1 53718510 3094377 complement(1011098..1011376) 1 NC_006350.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1011376 rpsT 3094377 rpsT Burkholderia pseudomallei K96243 30S ribosomal protein S20 YP_107496.1 1011098 R 272560 CDS YP_107497.1 53718511 3093782 1011781..1013331 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2557 or rs00736 SWALL:Q8XWB7 (EMBL:AL646070) (517 aa) fasta scores: E(): 2.3e-128, 65.69% id in 516 aa, and to Yersinia pestis membrane protein ypo2043 SWALL:Q8ZEW0 (EMBL:AJ414151) (511 aa) fasta scores: E(): 9.6e-97, 52.7% id in 518 aa, and to Escherichia coli, and Escherichia coli O157:H7 virulence factor MviN homolog b1069 or z1707 or ecs1447 SWALL:MVIN_ECOLI (SWALL:P75932) (511 aa) fasta scores: E(): 2.6e-96, 52.23% id in 515 aa; MviN-like protein 1013331 3093782 BPSL0872 Burkholderia pseudomallei K96243 MviN-like protein YP_107497.1 1011781 D 272560 CDS YP_107498.1 53718512 3091632 1013341..1014183 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2558 or rs00740 SWALL:Q8XWB6 (EMBL:AL646070) (281 aa) fasta scores: E(): 4.2e-61, 58.27% id in 278 aa, and to Xylella fastidiosa hypothetical protein xf1494 SWALL:YE94_XYLFA (SWALL:Q9PD85) (281 aa) fasta scores: E(): 4.3e-33, 38.84% id in 278 aa, and to Xanthomonas campestris hypothetical protein xcc3267 SWALL:AAM42537 (EMBL:AE012443) (293 aa) fasta scores: E(): 8.7e-32, 39.06% id in 279 aa; hypothetical protein 1014183 3091632 BPSL0873 Burkholderia pseudomallei K96243 hypothetical protein YP_107498.1 1013341 D 272560 CDS YP_107499.1 53718513 3091633 complement(1014452..1015210) 1 NC_006350.1 Similar to Ralstonia solanacearum probable 3-hydroxyacyl-CoA dehydrogenase type II oxidoreductase rsc2534 or rs05766 SWALL:Q8XWE0 (EMBL:AL646070) (252 aa) fasta scores: E(): 2.2e-67, 77.77% id in 252 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase pa2554 SWALL:Q9I0T0 (EMBL:AE004683) (255 aa) fasta scores: E(): 1.4e-56, 66.66% id in 255 aa, and to Brucella melitensis 3-oxoacyl-(acyl-carrier protein) reductase bmeii0816 SWALL:Q8YBS0 (EMBL:AE009715) (255 aa) fasta scores: E(): 7e-56, 65.88% id in 255 aa; short-chain dehydrogenase 1015210 3091633 BPSL0874 Burkholderia pseudomallei K96243 short-chain dehydrogenase YP_107499.1 1014452 R 272560 CDS YP_107500.1 53718514 3091823 complement(1015408..1016070) 1 NC_006350.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1016070 adk 3091823 adk Burkholderia pseudomallei K96243 adenylate kinase YP_107500.1 1015408 R 272560 CDS YP_107501.2 161723207 3091448 complement(1016279..1017070) 1 NC_006350.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1017070 kdsB 3091448 kdsB Burkholderia pseudomallei K96243 3-deoxy-manno-octulosonate cytidylyltransferase YP_107501.2 1016279 R 272560 CDS YP_107502.1 53718516 3092049 complement(1017244..1017450) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2531 or rs05763 SWALL:Q8XWE3 (EMBL:AL646070) (62 aa) fasta scores: E(): 1.9e-19, 82.25% id in 62 aa, and to Caulobacter crescentus hypothetical protein cc0108 SWALL:Q9ABW2 (EMBL:AE005685) (65 aa) fasta scores: E(): 3.4e-11, 62.5% id in 56 aa, and to Vibrio cholerae hypothetical protein vc1876 SWALL:Q9KQX1 (EMBL:AE004263) (59 aa) fasta scores: E(): 4.4e-11, 64.7% id in 51 aa; hypothetical protein 1017450 3092049 BPSL0877 Burkholderia pseudomallei K96243 hypothetical protein YP_107502.1 1017244 R 272560 CDS YP_107503.1 53718517 3092050 complement(1017431..1018459) 1 NC_006350.1 Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 1018459 3092050 BPSL0878 Burkholderia pseudomallei K96243 tetraacyldisaccharide 4'-kinase YP_107503.1 1017431 R 272560 CDS YP_107504.1 53718518 3091647 1018910..1020292 1 NC_006350.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1020292 xseA 3091647 xseA Burkholderia pseudomallei K96243 exodeoxyribonuclease VII large subunit YP_107504.1 1018910 D 272560 CDS YP_107505.1 53718519 3094563 1020489..1021067 1 NC_006350.1 Similar to Bordetella pertussis superoxide dismutase [Fe] SodB SWALL:SODF_BORPE (SWALL:P37369) (192 aa) fasta scores: E(): 6.4e-69, 83.33% id in 192 aa, and to Ralstonia solanacearum probable superoxide dismutase rsc2526 or rs01055 SWALL:Q8XWE8 (EMBL:AL646070) (192 aa) fasta scores: E(): 1.2e-70, 85.41% id in 192 aa; superoxide dismutase 1021067 sodB 3094563 sodB Burkholderia pseudomallei K96243 superoxide dismutase YP_107505.1 1020489 D 272560 CDS YP_107506.1 53718520 3091648 1021502..1022770 1 NC_006350.1 hypothetical protein 1022770 3091648 BPSL0881 Burkholderia pseudomallei K96243 hypothetical protein YP_107506.1 1021502 D 272560 CDS YP_107507.1 53718521 3092758 complement(1023539..1024744) 1 NC_006350.1 Similar to Pseudomonas aeruginosa chromate transport protein ChrA SWALL:CHRA_PSEAE (SWALL:P14285) (416 aa) fasta scores: E(): 1.4e-19, 29% id in 400 aa, and to Pseudomonas aeruginosa probable transporter pa4289 SWALL:Q9HWB1 (EMBL:AE004845) (401 aa) fasta scores: E(): 2.8e-88, 65.23% id in 397 aa, and to Agrobacterium tumefaciens chromate transport protein atu3079 or agr_l_3461 SWALL:Q8UBD7 (EMBL:AE009239) (409 aa) fasta scores: E(): 6.2e-75, 55.61% id in 392 aa; downstream repeat region; chromate transporter protein 1024744 3092758 BPSL0882 Burkholderia pseudomallei K96243 chromate transporter protein YP_107507.1 1023539 R 272560 CDS YP_107508.1 53718522 3092759 complement(1024978..1025733) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0275 SWALL:Q9I6L5 (EMBL:AE004465) (228 aa) fasta scores: E(): 1.1e-40, 56.3% id in 222 aa, and to Ralstonia solanacearum transcription regulator protein rsp0805 or rs01902 SWALL:Q8XRM6 (EMBL:AL646081) (239 aa) fasta scores: E(): 3.7e-38, 52.21% id in 226 aa; regulatory protein 1025733 3092759 BPSL0883 Burkholderia pseudomallei K96243 regulatory protein YP_107508.1 1024978 R 272560 CDS YP_107509.1 53718523 3093944 1025818..1026345 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0276 SWALL:Q9I6L4 (EMBL:AE004465) (171 aa) fasta scores: E(): 7e-44, 69.71% id in 175 aa, and to Pseudomonas putida Prs2-like protein SWALL:Q9WWZ6 (EMBL:AF031417) (174 aa) fasta scores: E(): 3.2e-40, 62.85% id in 175 aa; hypothetical protein 1026345 3093944 BPSL0884 Burkholderia pseudomallei K96243 hypothetical protein YP_107509.1 1025818 D 272560 CDS YP_107510.1 53718524 3093945 1026361..1027386 1 NC_006350.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 1027386 3093945 BPSL0885 Burkholderia pseudomallei K96243 2-dehydropantoate 2-reductase YP_107510.1 1026361 D 272560 CDS YP_107511.1 53718525 3091854 1027910..1028515 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc3026 or rs04731 SWALL:Q8XV06 (EMBL:AL646073) (196 aa) fasta scores: E(): 1e-40, 58.67% id in 196 aa; upstream repeat region (tgccgagt)3; hypothetical protein 1028515 3091854 BPSL0886 Burkholderia pseudomallei K96243 hypothetical protein YP_107511.1 1027910 D 272560 CDS YP_107512.1 53718526 3091855 complement(1028626..1029900) 1 NC_006350.1 Weakly similar to Clostridium acetobutylicum sensory protein, containing EAL-domain cac0322 SWALL:Q97M76 (EMBL:AE007546) (412 aa) fasta scores: E(): 4.5e-19, 25.76% id in 392 aa, and to Rhizobium loti hypothetical protein mll2537 SWALL:Q98I70 (EMBL:AP002999) (282 aa) fasta scores: E(): 2.8e-14, 31.22% id in 237 aa; upstream repeat region (cccgaacgcccgaacgcccgaacg)3 and (cccgaaca)3; hypothetical protein 1029900 3091855 BPSL0887 Burkholderia pseudomallei K96243 hypothetical protein YP_107512.1 1028626 R 272560 CDS YP_107513.1 53718527 3093849 complement(1030572..1032011) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transporter transmembrane protein rsp1278 or rs05323 SWALL:Q8XQE9 (EMBL:AL646083) (476 aa) fasta scores: E(): 1.2e-105, 61.7% id in 470 aa, and to Xanthomonas campestris MFS transporter EmrA or xcc2845 SWALL:AAM42117 (EMBL:AE012397) (473 aa) fasta scores: E(): 9.4e-98, 58.35% id in 461 aa; downstream repeat region (cccgaacgcccgaacgcccgaacg)3 and (cccgaaca)3; transporter protein 1032011 3093849 BPSL0888 Burkholderia pseudomallei K96243 transporter protein YP_107513.1 1030572 R 272560 CDS YP_107514.1 53718528 3093850 1032308..1032643 1 NC_006350.1 Doubtful CDS. No significant hits in the databases; hypothetical protein 1032643 3093850 BPSL0889 Burkholderia pseudomallei K96243 hypothetical protein YP_107514.1 1032308 D 272560 CDS YP_107515.1 53718529 3093797 complement(1032616..1033968) 1 NC_006350.1 C-terminal region is similar to Agrobacterium tumefaciens citrate synthase CisZ or atu4851 or agr_l_71 SWALL:Q8U6F6 (EMBL:AE009414) (335 aa) fasta scores: E(): 6.7e-14, 42.68% id in 335 aa, and to Staphylococcus aureus citrate synthase II CitZ SWALL:Q99TG7 (EMBL:AP003363) (373 aa) fasta scores: E(): 4.7e-13, 27.36% id in 391 aa. Possible alternative translational start site; citrate synthase 1033968 3093797 BPSL0890 Burkholderia pseudomallei K96243 citrate synthase YP_107515.1 1032616 R 272560 CDS YP_107516.1 53718530 3093798 complement(1034684..1035430) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3757 SWALL:Q9HXN8 (EMBL:AE004794) (247 aa) fasta scores: E(): 2.5e-56, 63.71% id in 248 aa, and to Xanthomonas campestris transcriptional regulator GntR family xcc3414 SWALL:AAM42684 (EMBL:AE012460) (255 aa) fasta scores: E(): 9.6e-47, 52.67% id in 243 aa; GntR family transcriptional regulator 1035430 3093798 BPSL0891 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_107516.1 1034684 R 272560 CDS YP_107517.1 53718531 3094218 1035599..1036444 1 NC_006350.1 Similar to Rhizobium loti probable oxidoreductase mlr5327 SWALL:Q98C22 (EMBL:AP003006) (281 aa) fasta scores: E(): 1.6e-58, 55.16% id in 281 aa, and to Rhizobium meliloti oxidoreductase r02112 or smc01429 SWALL:Q92NR7 (EMBL:AL591789) (281 aa) fasta scores: E(): 4.6e-56, 56.22% id in 281 aa, and to Agrobacterium tumefaciens aldo/keto reductase atu2032 or agr_c_3682 SWALL:Q8UDT7 (EMBL:AE009154) (281 aa) fasta scores: E(): 2.4e-52, 51.95% id in 281 aa; aldo/keto reductase 1036444 3094218 BPSL0892 Burkholderia pseudomallei K96243 aldo/keto reductase YP_107517.1 1035599 D 272560 CDS YP_107518.1 53718532 3094219 complement(1036989..1038575) 1 NC_006350.1 No significant database matches. C-terminal region of the CDS in glycine rich and contains contains repeat regions; lipoprotein 1038575 3094219 BPSL0892a Burkholderia pseudomallei K96243 lipoprotein YP_107518.1 1036989 R 272560 CDS YP_107519.1 53718533 3092467 complement(1039748..1041862) 1 NC_006350.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1041862 fusA 3092467 fusA Burkholderia pseudomallei K96243 elongation factor G YP_107519.1 1039748 R 272560 CDS YP_107520.1 53718534 3092782 complement(1042163..1042672) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc2494 or rs01102 SWALL:Q8XWI0 (EMBL:AL646070) (150 aa) fasta scores: E(): 4.3e-26, 53.37% id in 148 aa, and to Rhizobium meliloti hypothetical signal peptide protein r01717 or smc00288 SWALL:Q92PM3 (EMBL:AL591788) (163 aa) fasta scores: E(): 5.6e-10, 36.25% id in 160 aa; hypothetical protein 1042672 3092782 BPSL0894 Burkholderia pseudomallei K96243 hypothetical protein YP_107520.1 1042163 R 272560 CDS YP_107521.1 53718535 3092783 complement(1043345..1043923) 1 NC_006350.1 Similar to Escherichia coli O157:H7 orf, hypothetical protein YmfC or z1864 or ecs1607 SWALL:Q8X724 (EMBL:AE005329) (217 aa) fasta scores: E(): 1.8e-30, 51.41% id in 177 aa, and to Salmonella typhimurium ribosomal large subunit pseudouridine synthase YmfC or stm1237 SWALL:Q8ZPZ1 (EMBL:AE008754) (221 aa) fasta scores: E(): 1.8e-30, 50.56% id in 178 aa; pseudouridine synthase 1043923 3092783 BPSL0895 Burkholderia pseudomallei K96243 pseudouridine synthase YP_107521.1 1043345 R 272560 CDS YP_107522.1 53718536 3092199 1044191..1045450 1 NC_006350.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1045450 icd 3092199 icd Burkholderia pseudomallei K96243 isocitrate dehydrogenase YP_107522.1 1044191 D 272560 CDS YP_107523.1 53718537 3093301 1045618..1047237 1 NC_006350.1 Similar to Escherichia coli blue copper oxidase CueO SWALL:CUEO_ECOLI (SWALL:P36649) (516 aa) fasta scores: E(): 1.1e-20, 32.62% id in 472 aa, and to Pasteurella multocida hypothetical protein pm1938 SWALL:Q9CJQ6 (EMBL:AE006230) (515 aa) fasta scores: E(): 2.8e-65, 45.83% id in 504 aa, and to Campylobacter jejuni periplasmic oxidoreductase cj1516 SWALL:Q9PME8 (EMBL:AL139078) (513 aa) fasta scores: E(): 2e-36, 38.89% id in 545 aa; multicopper oxidase 1047237 3093301 BPSL0897 Burkholderia pseudomallei K96243 multicopper oxidase YP_107523.1 1045618 D 272560 CDS YP_107524.1 53718538 3093302 complement(1047367..1047570) 1 NC_006350.1 Similar to Bordetella pertussis cold shock-like protein CspA SWALL:CSPA_BORPE (SWALL:Q9Z5R4) (67 aa) fasta scores: E(): 4.1e-15, 64.61% id in 65 aa, and to Myxococcus xanthus CspB SWALL:Q9ZFK8 (EMBL:AF098529) (66 aa) fasta scores: E(): 1.1e-15, 68.18% id in 66 aa, and to Shewanella violacea cold shock-like protein CspA SWALL:Q9S1B7 (EMBL:AB015429) (70 aa) fasta scores: E(): 1.4e-15, 70.31% id in 64 aa; cold shock-like protein 1047570 3093302 BPSL0898 Burkholderia pseudomallei K96243 cold shock-like protein YP_107524.1 1047367 R 272560 CDS YP_107525.1 53718539 3091700 1048103..1048417 1 NC_006350.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1048417 clpS 3091700 clpS Burkholderia pseudomallei K96243 ATP-dependent Clp protease adaptor protein ClpS YP_107525.1 1048103 D 272560 CDS YP_107526.1 53718540 3092761 1048414..1050714 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ATP-dependent Clp protease ATP-binding subunit ClpA or LopD or b0882 or z1119 or ecs0968 SWALL:CLPA_ECOLI (SWALL:P15716) (758 aa) fasta scores: E(): 2.4e-163, 61.6% id in 750 aa, and to Ralstonia solanacearum probable ATP-dependent protease ClpA or rsc2464 or rs01141 SWALL:Q8XWL0 (EMBL:AL646070) (762 aa) fasta scores: E(): 0, 87.53% id in 762 aa, and to Pseudomonas aeruginosa ATP-binding protease component ClpA or pa2620 SWALL:Q9I0L8 (EMBL:AE004690) (758 aa) fasta scores: E(): 4.2e-175, 65.74% id in 762 aa; ATP-dependent Clp protease ATP-binding subunit 1050714 clpA 3092761 clpA Burkholderia pseudomallei K96243 ATP-dependent Clp protease ATP-binding subunit YP_107526.1 1048414 D 272560 CDS YP_107527.1 53718541 3091701 1050814..1052190 1 NC_006350.1 Similar to Escherichia coli phenylalanine-specific permease PheP or b0576 SWALL:PHEP_ECOLI (SWALL:P24207) (458 aa) fasta scores: E(): 6.1e-58, 38.06% id in 444 aa, and to Pseudomonas aeruginosa probable amino acid permease pa2079 SWALL:Q9I236 (EMBL:AE004635) (468 aa) fasta scores: E(): 2.1e-101, 65.16% id in 445 aa, and to Pseudomonas aeruginosa probable amino acid permease pa0789 SWALL:Q9I5E9 (EMBL:AE004514) (471 aa) fasta scores: E(): 5.8e-59, 38.68% id in 442 aa; amino acid permease 1052190 3091701 BPSL0900 Burkholderia pseudomallei K96243 amino acid permease YP_107527.1 1050814 D 272560 CDS YP_107528.1 53718542 3092059 1052263..1053006 1 NC_006350.1 C-terminal region is weakly similar to Xanthomonas campestris hypothetical protein xcc0131 SWALL:AAM39450 (EMBL:AE012108) (223 aa) fasta scores: E(): 0.042, 24.61% id in 195 aa; hypothetical protein 1053006 3092059 BPSL0901 Burkholderia pseudomallei K96243 hypothetical protein YP_107528.1 1052263 D 272560 CDS YP_107529.1 53718543 3092060 1053171..1053953 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc3405 or rs01714 SWALL:Q8XTZ0 (EMBL:AL646075) (261 aa) fasta scores: E(): 1.9e-55, 64.87% id in 242 aa, and to Chlorobium tepidum hypothetical protein ct0197 SWALL:AAM71445 (EMBL:AE012799) (263 aa) fasta scores: E(): 1e-44, 53.08% id in 243 aa. CDS is truncated at the N-terminus in comparison to orthologues; Repeat motif found as four tandem repeats with two transmembrane regions and a conserved Trp; hypothetical protein 1053953 3092060 BPSL0902 Burkholderia pseudomallei K96243 hypothetical protein YP_107529.1 1053171 D 272560 CDS YP_107530.1 53718544 3094626 complement(1054042..1054488) 1 NC_006350.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 1054488 dut 3094626 dut Burkholderia pseudomallei K96243 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_107530.1 1054042 R 272560 CDS YP_107531.1 53718545 3093572 complement(1054552..1055763) 1 NC_006350.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1055763 dfp 3093572 dfp Burkholderia pseudomallei K96243 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_107531.1 1054552 R 272560 CDS YP_107532.1 53718546 3092476 complement(1055825..1056325) 1 NC_006350.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1056325 lspA 3092476 lspA Burkholderia pseudomallei K96243 lipoprotein signal peptidase YP_107532.1 1055825 R 272560 CDS YP_107533.1 53718547 3092378 complement(1056325..1059162) 1 NC_006350.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1059162 ileS 3092378 ileS Burkholderia pseudomallei K96243 isoleucyl-tRNA synthetase YP_107533.1 1056325 R 272560 CDS YP_107534.1 53718548 3092320 complement(1059274..1060266) 1 NC_006350.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 1060266 3092320 BPSL0907 Burkholderia pseudomallei K96243 bifunctional riboflavin kinase/FMN adenylyltransferase YP_107534.1 1059274 R 272560 CDS YP_107535.1 53718549 3092878 1060391..1061053 1 NC_006350.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 1061053 purN 3092878 purN Burkholderia pseudomallei K96243 phosphoribosylglycinamide formyltransferase YP_107535.1 1060391 D 272560 CDS YP_107536.1 53718550 3092321 1061050..1062312 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2453 or rs01153 SWALL:Q8XWM1 (EMBL:AL646070) (417 aa) fasta scores: E(): 1.6e-101, 63.78% id in 417 aa, and to Neisseria meningitidis Fmu and Fmv protein, nmb1351 SWALL:Q9JZ03 (EMBL:AE002483) (418 aa) fasta scores: E(): 5.9e-75, 52.54% id in 413 aa, and to Neisseria meningitidis sun-family protein nma1563 SWALL:Q9JTZ9 (EMBL:AL162756) (418 aa) fasta scores: E(): 6.5e-73, 51.09% id in 413 aa; NOL1/NOP2/Sun family protein 1062312 3092321 BPSL0909 Burkholderia pseudomallei K96243 NOL1/NOP2/Sun family protein YP_107536.1 1061050 D 272560 CDS YP_107537.1 53718551 3094129 1062324..1063676 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2451 or rs01155 SWALL:Q8XWM3 (EMBL:AL646070) (447 aa) fasta scores: E(): 3.2e-71, 47.19% id in 445 aa, and to Rhizobium meliloti hypothetical protein ra0860 or sma1582 SWALL:Q92YL3 (EMBL:AE007272) (432 aa) fasta scores: E(): 2e-33, 32.18% id in 435 aa; mechanosensitive ion channel protein 1063676 3094129 BPSL0910 Burkholderia pseudomallei K96243 mechanosensitive ion channel protein YP_107537.1 1062324 D 272560 CDS YP_107538.1 53718552 3094130 1063873..1065069 1 NC_006350.1 Similar to Azotobacter vinelandii stearoyl-CoA desaturase SWALL:Q59162 (EMBL:U37517) (367 aa) fasta scores: E(): 7.9e-71, 50.56% id in 356 aa, and to Ralstonia solanacearum stearoyl-CoA desaturase oxidoreductase rsc2450 or rs01156 SWALL:Q8XWM4 (EMBL:AL646070) (398 aa) fasta scores: E(): 3.6e-116, 68.17% id in 399 aa, and to Pseudomonas aeruginosa probable fatty acid desaturase pa0286 SWALL:Q9I6K4 (EMBL:AE004466) (392 aa) fasta scores: E(): 6.1e-85, 54.49% id in 389 aa; transmembrane fatty acid desaturase 1065069 3094130 BPSL0911 Burkholderia pseudomallei K96243 transmembrane fatty acid desaturase YP_107538.1 1063873 D 272560 CDS YP_107539.1 53718553 3092397 1065238..1066374 1 NC_006350.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1066374 nadA 3092397 nadA Burkholderia pseudomallei K96243 quinolinate synthetase YP_107539.1 1065238 D 272560 CDS YP_107540.1 53718554 3092498 1066371..1067255 1 NC_006350.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 1067255 nadC 3092498 nadC Burkholderia pseudomallei K96243 nicotinate-nucleotide pyrophosphorylase YP_107540.1 1066371 D 272560 CDS YP_107541.1 53718555 3092497 complement(1067448..1069094) 1 NC_006350.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 1069094 nadB 3092497 nadB Burkholderia pseudomallei K96243 L-aspartate oxidase YP_107541.1 1067448 R 272560 CDS YP_107542.1 53718556 3092638 complement(1069217..1069384) 1 NC_006350.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1069384 rpmG 3092638 rpmG Burkholderia pseudomallei K96243 50S ribosomal protein L33 YP_107542.1 1069217 R 272560 CDS YP_107543.1 53718557 3092490 complement(1069402..1069635) 1 NC_006350.1 required for 70S ribosome assembly; 50S ribosomal protein L28 1069635 rpmB 3092490 rpmB Burkholderia pseudomallei K96243 50S ribosomal protein L28 YP_107543.1 1069402 R 272560 CDS YP_107544.1 53718558 3093257 complement(1069929..1070639) 1 NC_006350.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 1070639 radC 3093257 radC Burkholderia pseudomallei K96243 DNA repair protein RadC YP_107544.1 1069929 R 272560 CDS YP_107545.1 53718559 3093258 1070904..1071359 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 FkbP-type peptidyl-prolyl cis-trans isomerase FkpB or SlpA or b0028 or z0033 or ecs0031 SWALL:FKBX_ECOLI (SWALL:P22563) (148 aa) fasta scores: E(): 2.3e-14, 40.55% id in 143 aa, and to Ralstonia solanacearum probable FkbP-type peptidyl-prolyl cis-trans isomerase FkpB or rsc2443 or rs01351 SWALL:Q8XWN1 (EMBL:AL646070) (144 aa) fasta scores: E(): 1.4e-38, 71.32% id in 143 aa, and to Pseudomonas fluorescens probable FkbP-type peptidyl-prolyl cis-trans isomerase YaaD SWALL:FKBX_PSEFL (SWALL:P21863) (150 aa) fasta scores: E(): 8.1e-15, 39.45% id in 147 aa; FkpB-type peptidyl-prolyl cis-trans isomerase 1071359 3093258 BPSL0918 Burkholderia pseudomallei K96243 FkpB-type peptidyl-prolyl cis-trans isomerase YP_107545.1 1070904 D 272560 CDS YP_107546.1 53718560 3093936 1071362..1072342 1 NC_006350.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1072342 ispH 3093936 ispH Burkholderia pseudomallei K96243 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_107546.1 1071362 D 272560 CDS YP_107547.1 53718561 3092180 1072599..1073120 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 1073120 3092180 BPSL0919A Burkholderia pseudomallei K96243 hypothetical protein YP_107547.1 1072599 D 272560 CDS YP_107548.1 53718562 3092181 1073343..1074293 1 NC_006350.1 Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease BraD or pa1073 SWALL:BRAD_PSEAE (SWALL:P21627) (307 aa) fasta scores: E(): 3.1e-45, 49.18% id in 307 aa, and to Ralstonia solanacearum amino-acid transmembrane ABC transporter protein rsc2440 or rs01355 SWALL:Q8XWN3 (EMBL:AL646070) (311 aa) fasta scores: E(): 4.7e-81, 75.94% id in 316 aa; amino-acid transport permease 1074293 3092181 BPSL0920 Burkholderia pseudomallei K96243 amino-acid transport permease YP_107548.1 1073343 D 272560 CDS YP_107549.1 53718563 3092287 1074304..1075473 1 NC_006350.1 Similar to the C-terminal region of Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease BraE or pa1072 SWALL:BRAE_PSEAE (SWALL:P21628) (417 aa) fasta scores: E(): 3.3e-41, 44.56% id in 359 aa. Full length CDS is similar to and to Ralstonia solanacearum probable amino-acid transmembrane ABC transporter protein rsc2439 or rs02663 SWALL:Q8XWN4 (EMBL:AL646070) (378 aa) fasta scores: E(): 1.2e-100, 68.08% id in 376 aa; transport system permease 1075473 3092287 BPSL0921 Burkholderia pseudomallei K96243 transport system permease YP_107549.1 1074304 D 272560 CDS YP_107550.1 53718564 3092288 1075536..1076309 1 NC_006350.1 Similar to Streptococcus pneumoniae R6 ABC transporter ATP-binding protein-branched chain amino acid transport LivG SWALL:AAK99466 (EMBL:AE008443) (254 aa) fasta scores: E(): 8.6e-36, 50.4% id in 248 aa, and to Ralstonia solanacearum probable amino acid ATP-binding ABC transporter protein rsc2438 or rs02664 SWALL:Q8XWN5 (EMBL:AL646070) (257 aa) fasta scores: E(): 1.4e-64, 81.71% id in 257 aa, and to Ralstonia solanacearum probable amino-acid ATP-binding ABC transporter protein rsp0016 or rs01988 SWALL:Q8XTT8 (EMBL:AL646076) (265 aa) fasta scores: E(): 2.6e-40, 54.25% id in 247 aa; Possible branched-chain amino acid transporter; ABC transporter ATP-binding protein 1076309 3092288 BPSL0922 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_107550.1 1075536 D 272560 CDS YP_107551.1 53718565 3093053 1076309..1077025 1 NC_006350.1 Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 1e-36, 49.14% id in 234 aa, and to Ralstonia solanacearum probable amino acid ATP-binding ABC transporter protein rsc2437 or rs02666 SWALL:Q8XWN6 (EMBL:AL646070) (244 aa) fasta scores: E(): 5.1e-61, 78.99% id in 238 aa, and to Thermotoga maritima branched chain amino acid ABC transporter ATP-binding protein tm1139 SWALL:Q9X0M3 (EMBL:AE001771) (239 aa) fasta scores: E(): 1.1e-41, 54.43% id in 237 aa; ATP-binding ABC transporter protein 1077025 3093053 BPSL0923 Burkholderia pseudomallei K96243 ATP-binding ABC transporter protein YP_107551.1 1076309 D 272560 CDS YP_107552.1 53718566 3093054 1077328..1077996 1 NC_006350.1 Poor database matches. Weakly similar to Ralstonia solanacearum hypothetical protein rsc1547 or rs05234 SWALL:Q8XZ57 (EMBL:AL646065) (242 aa) fasta scores: E(): 0.71, 25.4% id in 248 aa; hypothetical protein 1077996 3093054 BPSL0924 Burkholderia pseudomallei K96243 hypothetical protein YP_107552.1 1077328 D 272560 CDS YP_107553.1 53718567 3094208 complement(1078146..1078604) 1 NC_006350.1 Similar to Yersinia pestis acetyltransferase ypo3031 SWALL:Q8ZCG0 (EMBL:AJ414155) (141 aa) fasta scores: E(): 5e-16, 41.25% id in 143 aa, and to Escherichia coli O157:H7 hypothetical protein Z3699 z3699 or ecs3305 SWALL:Q8XBI6 (EMBL:AE005473) (178 aa) fasta scores: E(): 1.8e-15, 41.49% id in 147 aa; acetyltransferase 1078604 3094208 BPSL0925 Burkholderia pseudomallei K96243 acetyltransferase YP_107553.1 1078146 R 272560 CDS YP_107554.1 53718568 3094209 complement(1078621..1079805) 1 NC_006350.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase 1079805 argD 3094209 argD Burkholderia pseudomallei K96243 acetylornithine transaminase YP_107554.1 1078621 R 272560 CDS YP_107555.1 53718569 3094804 complement(1080082..1081113) 1 NC_006350.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 1081113 3094804 BPSL0927 Burkholderia pseudomallei K96243 CDP-6-deoxy-delta-3,4-glucoseen reductase YP_107555.1 1080082 R 272560 CDS YP_107556.1 53718570 3094805 1081196..1082221 1 NC_006350.1 Similar to Ralstonia solanacearum oxidoreductase rsc2433 or rs02671 SWALL:Q8XWP0 (EMBL:AL646070) (341 aa) fasta scores: E(): 6.2e-62, 59.69% id in 330 aa, and to Rhizobium loti hypothetical protein mlr4637 SWALL:Q98DM4 (EMBL:AP003004) (299 aa) fasta scores: E(): 1.2e-12, 32.39% id in 321 aa; hypothetical protein 1082221 3094805 BPSL0928 Burkholderia pseudomallei K96243 hypothetical protein YP_107556.1 1081196 D 272560 CDS YP_107557.1 53718571 3093273 complement(1082214..1082486) 1 NC_006350.1 hypothetical protein 1082486 3093273 BPSL0929 Burkholderia pseudomallei K96243 hypothetical protein YP_107557.1 1082214 R 272560 CDS YP_107558.1 53718572 3093274 complement(1082519..1083241) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ribosomal small subunit pseudouridine synthase A RsuA or b2183 or z3442 or ecs3075 SWALL:RSUA_ECOLI (SWALL:P33918) (231 aa) fasta scores: E(): 1.3e-22, 37.44% id in 235 aa, and to Ralstonia solanacearum probable ribosomal small subunit pseudouridine synthase A protein RsuA or rsc0674 or rs01579 SWALL:Q8Y1L6 (EMBL:AL646060) (252 aa) fasta scores: E(): 5.2e-50, 58.12% id in 234 aa, and to Neisseria meningitidis ribosomal small subunit pseudouridine synthase nma1508 or nmb1298 SWALL:Q9JQL5 (EMBL:AL162756) (230 aa) fasta scores: E(): 2.4e-34, 43.91% id in 230 aa; ribosomal small subunit pseudouridine synthase A 1083241 3093274 BPSL0930 Burkholderia pseudomallei K96243 ribosomal small subunit pseudouridine synthase A YP_107558.1 1082519 R 272560 CDS YP_107559.1 53718573 3092964 1083389..1083754 1 NC_006350.1 Similar to Escherichia coli copper resistance protein C precursor PcoC SWALL:PCOC_ECOLI (SWALL:Q47454) (126 aa) fasta scores: E(): 1.7e-07, 35.15% id in 128 aa, and to Salmonella typhimurium homolog of Cu resistance protein CopC yobA or stm1875 SWALL:Q8ZNX1 (EMBL:AE008783) (124 aa) fasta scores: E(): 8.2e-10, 37.09% id in 124 aa; copper resistance protein 1083754 3092964 BPSL0931 Burkholderia pseudomallei K96243 copper resistance protein YP_107559.1 1083389 D 272560 CDS YP_107560.1 53718574 3092965 complement(1083766..1084728) 1 NC_006350.1 Similar to Neisseria meningitidis LysR family transcriptional regulator CrgA SWALL:Q9JPU9 (EMBL:AF190471) (299 aa) fasta scores: E(): 9.6e-35, 39.72% id in 292 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3124 SWALL:Q9HZA0 (EMBL:AE004736) (303 aa) fasta scores: E(): 4.9e-63, 57.96% id in 295 aa, and to Rhizobium loti transcriptional regulator mll4082 SWALL:Q98EU3 (EMBL:AP003003) (301 aa) fasta scores: E(): 3.6e-62, 56.56% id in 297 aa; LysR family transcriptional regulator 1084728 3092965 BPSL0932 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107560.1 1083766 R 272560 CDS YP_107561.1 53718575 3092899 complement(1084930..1085826) 1 NC_006350.1 Similar to Pectobacterium carotovorum subsp. atrosepticum regulator of exoenzyme virulence factors HexA SWALL:O85276 (EMBL:AF057064) (316 aa) fasta scores: E(): 1.1e-24, 32.54% id in 298 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3995 SWALL:Q9HX26 (EMBL:AE004817) (297 aa) fasta scores: E(): 5.9e-77, 71.23% id in 292 aa, and to Streptomyces coelicolor LysR-type transcriptional regulator sco6555 or sc4b5.05C SWALL:Q9ZBW3 (EMBL:AL034443) (292 aa) fasta scores: E(): 5.8e-31, 41.42% id in 280 aa; LysR family transcriptional regulator 1085826 3092899 BPSL0933 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107561.1 1084930 R 272560 CDS YP_107562.1 53718576 3092900 1085948..1086844 1 NC_006350.1 Similar to Streptomyces antibioticus hydrolase SWALL:Q93F92 (EMBL:AF322256) (302 aa) fasta scores: E(): 1.3e-12, 29.56% id in 274 aa, and to Pseudomonas aeruginosa probable epoxide hydrolase pa3994 SWALL:Q9HX27 (EMBL:AE004817) (296 aa) fasta scores: E(): 8.8e-91, 71.18% id in 295 aa; hydrolase 1086844 3092900 BPSL0934 Burkholderia pseudomallei K96243 hydrolase YP_107562.1 1085948 D 272560 CDS YP_107563.1 53718577 3092785 complement(1087055..1087744) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1157 or rs04594 SWALL:Q8Y087 (EMBL:AL646063) (241 aa) fasta scores: E(): 7.8e-50, 56.08% id in 230 aa, and to Xanthomonas axonopodis hypothetical protein xac1859 SWALL:AAM36721 (EMBL:AE011819) (237 aa) fasta scores: E(): 3.3e-46, 52.21% id in 226 aa; hypothetical protein 1087744 3092785 BPSL0935 Burkholderia pseudomallei K96243 hypothetical protein YP_107563.1 1087055 R 272560 CDS YP_107564.1 53718578 3092786 complement(1087759..1088655) 1 NC_006350.1 Similar to Methanopyrus kandleri dihydrodipicolinate synthase DapA or mk1607 SWALL:Q8TUZ4 (EMBL:AE010450) (300 aa) fasta scores: E(): 1.7e-25, 31.48% id in 289 aa, and to Pseudomonas aeruginosa probable dihydrodipicolinate synthetase pa0223 SWALL:Q9I6R5 (EMBL:AE004460) (293 aa) fasta scores: E(): 4e-68, 61.43% id in 293 aa, and to Vibrio sp. CH-291 hypothetical protein SWALL:Q93IK7 (EMBL:AJ314791) (295 aa) fasta scores: E(): 9.2e-63, 57.58% id in 290 aa; dihydrodipicolinate synthetase 1088655 3092786 BPSL0936 Burkholderia pseudomallei K96243 dihydrodipicolinate synthetase YP_107564.1 1087759 R 272560 CDS YP_107565.1 53718579 3092851 complement(1088737..1089519) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable aldolase pa0224 SWALL:Q9I6R4 (EMBL:AE004460) (260 aa) fasta scores: E(): 1e-76, 69.49% id in 259 aa, and to Vibrio sp. CH-291 hypothetical protein SWALL:Q93IK8 (EMBL:AJ314791) (259 aa) fasta scores: E(): 2e-71, 65.63% id in 259 aa, and to Streptomyces sphaeroides NovR SWALL:Q9L9F0 (EMBL:AF170880) (270 aa) fasta scores: E(): 2.1e-15, 33.62% id in 232 aa; class II aldolase/adducin domain-containing protein 1089519 3092851 BPSL0937 Burkholderia pseudomallei K96243 class II aldolase/adducin domain-containing protein YP_107565.1 1088737 R 272560 CDS YP_107566.1 53718580 3092852 1089651..1090214 1 NC_006350.1 Similar to Ralstonia solanacearum transcription regulator protein rsc1159 or rs04592 SWALL:Q8Y085 (EMBL:AL646063) (182 aa) fasta scores: E(): 3e-34, 62.35% id in 170 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0225 SWALL:Q9I6R3 (EMBL:AE004460) (179 aa) fasta scores: E(): 3e-31, 55.17% id in 174 aa; DNA-binding protein 1090214 3092852 BPSL0938 Burkholderia pseudomallei K96243 DNA-binding protein YP_107566.1 1089651 D 272560 CDS YP_107567.1 53718581 3094597 1090254..1090730 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 1090730 3094597 BPSL0938A Burkholderia pseudomallei K96243 hypothetical protein YP_107567.1 1090254 D 272560 CDS YP_107568.1 53718582 3094598 1091418..1092440 1 NC_006350.1 Similar to Xanthomonas axonopodis hypothetical protein xac0625 SWALL:AAM35514 (EMBL:AE011690) (321 aa) fasta scores: E(): 1.4e-42, 39.62% id in 323 aa, and to Xanthomonas campestris hypothetical protein xcc3509 SWALL:AAM42779 (EMBL:AE012470) (321 aa) fasta scores: E(): 2.9e-42, 39.62% id in 323 aa; DeoR family regulatory protein 1092440 3094598 BPSL0939 Burkholderia pseudomallei K96243 DeoR family regulatory protein YP_107568.1 1091418 D 272560 CDS YP_107569.1 53718583 3091733 1092813..1092992 1 NC_006350.1 Similar to Methanosarcina mazei conserved protein mm3163 SWALL:AAM32859 (EMBL:AE013574) (53 aa) fasta scores: E(): 2.3e-06, 51.78% id in 56 aa; hypothetical protein 1092992 3091733 BPSL0940 Burkholderia pseudomallei K96243 hypothetical protein YP_107569.1 1092813 D 272560 CDS YP_107570.1 53718584 3091734 1093213..1097322 1 NC_006350.1 hypothetical protein 1097322 3091734 BPSL0941 Burkholderia pseudomallei K96243 hypothetical protein YP_107570.1 1093213 D 272560 CDS YP_107571.1 53718585 3092810 1097348..1099549 1 NC_006350.1 hypothetical protein 1099549 3092810 BPSL0942 Burkholderia pseudomallei K96243 hypothetical protein YP_107571.1 1097348 D 272560 CDS YP_107572.1 53718586 3092811 complement(1099585..1100412) 1 NC_006350.1 Similar to the C-terminal region of Xanthomonas campestris insertion element IS476 hypothetical 39.2 kDa protein SWALL:YI61_XANCV (SWALL:P25438) (346 aa) fasta scores: E(): 1.9e-46, 46.59% id in 264 aa, and to the full length Ralstonia solanacearum ISRso14-transposase OrfB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 5.6e-57, 53.96% id in 252 aa; insertion element protein 1100412 3092811 BPSL0943 Burkholderia pseudomallei K96243 insertion element protein YP_107572.1 1099585 R 272560 CDS YP_107573.1 53718587 3094058 1100898..1102121 1 NC_006350.1 Similar to Rhizobium loti probable integrase mlr0958 SWALL:Q98LN1 (EMBL:AP002996) (417 aa) fasta scores: E(): 2.4e-12, 27.34% id in 267 aa, and to Caulobacter crescentus integrase/recombinase, phage integrase cc2681 SWALL:Q9A4Z1 (EMBL:AE005935) (432 aa) fasta scores: E(): 5.4e-10, 25.92% id in 270 aa; phage integrase/recombinase 1102121 3094058 BPSL0944 Burkholderia pseudomallei K96243 phage integrase/recombinase YP_107573.1 1100898 D 272560 CDS YP_107574.1 53718588 3094059 complement(1102333..1105446) 1 NC_006350.1 Internal region is similar to an internal region of Escherichia coli type I restriction enzyme EcoR124II R protein HsdR or Hsr SWALL:T1R1_ECOLI (SWALL:P10486) (1033 aa) fasta scores: E(): 0.00016, 22.65% id in 693 aa. Full length CDS is similar to Xanthomonas axonopodis type I restriction-modification system endonuclease xac2898 SWALL:AAM37743 (EMBL:AE011932) (1084 aa) fasta scores: E(): 2e-86, 41.17% id in 1059 aa; hypothetical protein 1105446 3094059 BPSL0945 Burkholderia pseudomallei K96243 hypothetical protein YP_107574.1 1102333 R 272560 CDS YP_107575.1 53718589 3093178 complement(1105502..1106434) 1 NC_006350.1 Similar to Brucella melitensis transporter bmeii0447 SWALL:Q8YCT1 (EMBL:AE009681) (309 aa) fasta scores: E(): 8.9e-63, 54.04% id in 309 aa, and to Streptomyces coelicolor hypothetical protein sco3509 or sce134.10 SWALL:Q9X865 (EMBL:AL049661) (320 aa) fasta scores: E(): 5.2e-43, 42.44% id in 311 aa; hypothetical protein 1106434 3093178 BPSL0946 Burkholderia pseudomallei K96243 hypothetical protein YP_107575.1 1105502 R 272560 CDS YP_107576.1 53718590 3093179 complement(1106431..1107720) 1 NC_006350.1 N-terminus is similar to the C-terminal region of Escherichia coli type I restriction enzyme EcoEI specificity protein HsdS or Hss SWALL:T1SE_ECOLI (SWALL:P19705) (594 aa) fasta scores: E(): 6.4e-07, 27.55% id in 196 aa. Full length CDS is similar to Methanosarcina mazei type I restriction-modification system specificity subunit mm2703 SWALL:AAM32399 (EMBL:AE013517) (440 aa) fasta scores: E(): 5.9e-20, 37.64% id in 178 aa; type I restriction enzyme specificity protein 1107720 3093179 BPSL0947 Burkholderia pseudomallei K96243 type I restriction enzyme specificity protein YP_107576.1 1106431 R 272560 CDS YP_107577.1 53718591 3093463 complement(1107717..1109558) 1 NC_006350.1 N-terminus is similar to the N-terminal region of Escherichia coli type I restriction enzyme ecoprrI M protein HsdM SWALL:T1MP_ECOLI (SWALL:Q47163) (520 aa) fasta scores: E(): 6.5e-09, 26.65% id in 469 aa. Full length CDS is similar to Caulobacter crescentus type I restriction-modification system, M subunit, cc0620 SWALL:Q9AAH8 (EMBL:AE005738) (611 aa) fasta scores: E(): 6.7e-183, 75.36% id in 613 aa; type I restriction-modification methylase 1109558 3093463 BPSL0948 Burkholderia pseudomallei K96243 type I restriction-modification methylase YP_107577.1 1107717 R 272560 CDS YP_107578.1 53718592 3093464 complement(1109892..1110272) 1 NC_006350.1 Possible gene remnant. Weakly similar to the C-terminal region of Corynebacterium glutamicum integrase cgl1419 SWALL:BAB98812 (EMBL:AP005278) (304 aa) fasta scores: E(): 0.42, 28.71% id in 101 aa; hypothetical protein 1110272 3093464 BPSL0949 Burkholderia pseudomallei K96243 hypothetical protein YP_107578.1 1109892 R 272560 CDS YP_107579.1 53718593 3092958 1110368..1110631 1 NC_006350.1 Identical to Burkholderia cepacia insertion element IS407 hypothetical 10.0 kDa protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 3.7e-32, 100% id in 87 aa. Similar to Ralstonia solanacearum ISRso14-transposase orfA protein SWALL:Q8XGL4 (EMBL:AL646083) (87 aa) fasta scores: E(): 2.1e-29, 93.1% id in 87 aa; hypothetical protein 1110631 3092958 BPSL0950 Burkholderia pseudomallei K96243 hypothetical protein YP_107579.1 1110368 D 272560 CDS YP_107580.1 53718594 3094019 complement(1110880..1111743) 1 NC_006350.1 Similar to Bacteroides nodosus plasmid replication protein C RepC SWALL:Q9ETY6 (EMBL:Y19120) (283 aa) fasta scores: E(): 3e-31, 38.76% id in 276 aa, and to Salmonella typhi plasmid replication protein HCM1.221 SWALL:Q935I4 (EMBL:AL513383) (283 aa) fasta scores: E(): 1.4e-30, 38.62% id in 277 aa; replication protein 1111743 3094019 BPSL0952 Burkholderia pseudomallei K96243 replication protein YP_107580.1 1110880 R 272560 CDS YP_107581.1 53718595 3094020 complement(1111772..1111933) 1 NC_006350.1 Similar to an internal region of Bbcteriophage P4 hypothetical protein SWALL:Y9K_BPP4 (SWALL:P12552) (88 aa) fasta scores: E(): 0.0049, 47.36% id in 38 aa; hypothetical protein 1111933 3094020 BPSL0953 Burkholderia pseudomallei K96243 hypothetical protein YP_107581.1 1111772 R 272560 CDS YP_107582.1 53718596 3093151 complement(1112425..1112763) 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 1112763 3093151 BPSL0954 Burkholderia pseudomallei K96243 hypothetical protein YP_107582.1 1112425 R 272560 CDS YP_107583.1 53718597 3093152 complement(1112760..1113701) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 cys regulon transcriptional activator CysB or b1275 or z2535 or ecs1847 SWALL:CYSB_ECOLI (SWALL:P06613) (324 aa) fasta scores: E(): 1.8e-49, 44.73% id in 304 aa, and to Ralstonia solanacearum cys regulon transcriptional activator-related transcription regulator protein CysB2 or rsc2427 or rs02682 SWALL:Q8XWP6 (EMBL:AL646070) (313 aa) fasta scores: E(): 5.8e-88, 73.48% id in 313 aa, and to Neisseria meningitidis cys regulon transcriptional activator nmb0381 SWALL:Q9K116 (EMBL:AE002394) (316 aa) fasta scores: E(): 3.9e-58, 51.3% id in 306 aa; transcriptional regulator CysB-like protein 1113701 3093152 BPSL0955 Burkholderia pseudomallei K96243 transcriptional regulator CysB-like protein YP_107583.1 1112760 R 272560 CDS YP_107584.1 53718598 3092756 1113921..1115600 1 NC_006350.1 Similar to Pseudomonas aeruginosa sulfite reductase CysI SWALL:O31037 (EMBL:AF026066) (552 aa) fasta scores: E(): 9.2e-145, 64.91% id in 553 aa, and to Ralstonia solanacearum probable sulfite reductase oxidoreductase CysI1 or rsc2425 or rs02684 SWALL:Q8XWP8 (EMBL:AL646070) (553 aa) fasta scores: E(): 3.4e-169, 73.65% id in 558 aa, and to Pseudomonas aeruginosa sulfite reductase CysI or pa1838 SWALL:Q9I2Q7 (EMBL:AE004609) (552 aa) fasta scores: E(): 9.9e-152, 67.26% id in 553 aa; sulfite reductase 1115600 cysI 3092756 cysI Burkholderia pseudomallei K96243 sulfite reductase YP_107584.1 1113921 D 272560 CDS YP_107585.1 53718599 3093319 1115625..1116167 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2424 or rs02687 SWALL:Q8XWP9 (EMBL:AL646070) (194 aa) fasta scores: E(): 1.3e-33, 57.39% id in 169 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1837 pa1837 SWALL:Q9I2Q8 (EMBL:AE004609) (165 aa) fasta scores: E(): 9.1e-32, 55.23% id in 172 aa; hypothetical protein 1116167 3093319 BPSL0957 Burkholderia pseudomallei K96243 hypothetical protein YP_107585.1 1115625 D 272560 CDS YP_107586.1 53718600 3093471 1116164..1116913 1 NC_006350.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 1116913 cysH 3093471 cysH Burkholderia pseudomallei K96243 phosphoadenosine phosphosulfate reductase YP_107586.1 1116164 D 272560 CDS YP_107587.1 53718601 3094480 1116994..1117959 1 NC_006350.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1117959 cysD 3094480 cysD Burkholderia pseudomallei K96243 sulfate adenylyltransferase subunit 2 YP_107587.1 1116994 D 272560 CDS YP_107588.1 53718602 3093094 1117982..1119298 1 NC_006350.1 Similar to Escherichia coli sulfate adenylyltransferase subunit 1 CysN or b2751 SWALL:CYSN_ECOLI (SWALL:P23845) (475 aa) fasta scores: E(): 3.4e-47, 49.06% id in 426 aa, and to Ralstonia solanacearum probable sulfate adenylyltransferase subunit 1 protein rsc2421 or rs02692 SWALL:Q8XWQ2 (EMBL:AL646070) (435 aa) fasta scores: E(): 2.3e-111, 71.69% id in 431 aa; sulfate adenylyltransferase subunit 1 1119298 cysN 3093094 cysN Burkholderia pseudomallei K96243 sulfate adenylyltransferase subunit 1 YP_107588.1 1117982 D 272560 CDS YP_107589.1 53718603 3093320 1119295..1120131 1 NC_006350.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 1120131 3093320 BPSL0961 Burkholderia pseudomallei K96243 uroporphyrin-III C-methyltransferase YP_107589.1 1119295 D 272560 CDS YP_107590.1 53718604 3093988 complement(1120341..1120727) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2418 or rs02695 SWALL:Q8XWQ5 (EMBL:AL646070) (123 aa) fasta scores: E(): 8.2e-27, 64.46% id in 121 aa; hypothetical protein 1120727 3093988 BPSL0962 Burkholderia pseudomallei K96243 hypothetical protein YP_107590.1 1120341 R 272560 CDS YP_107591.1 53718605 3093989 complement(1120759..1121910) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2417 or rs02697 SWALL:Q8XWQ6 (EMBL:AL646070) (401 aa) fasta scores: E(): 3.2e-38, 58.83% id in 396 aa, and to Neisseria meningitidis hypothetical protein nmb1571 SWALL:Q9JYI5 (EMBL:AE002507) (356 aa) fasta scores: E(): 1.1e-14, 33.5% id in 382 aa, and to Escherichia coli hypothetical protein b4262 SWALL:YJGQ_ECOLI (SWALL:P39341) (360 aa) fasta scores: E(): 2.9e-09, 27.96% id in 379 aa; permease 1121910 3093989 BPSL0963 Burkholderia pseudomallei K96243 permease YP_107591.1 1120759 R 272560 CDS YP_107592.1 53718606 3091715 complement(1121914..1123011) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2416 or rs02698 SWALL:Q8XWQ7 (EMBL:AL646070) (372 aa) fasta scores: E(): 3.6e-68, 50.71% id in 349 aa, and to Neisseria meningitidis hypothetical protein nmb1570 SWALL:Q9JYI6 (EMBL:AE002507) (371 aa) fasta scores: E(): 1.6e-40, 34.27% id in 356 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YjgP or b4261 or z5873 or ecs5238 SWALL:YJGP_ECOLI (SWALL:P39340) (366 aa) fasta scores: E(): 1.8e-26, 29.15% id in 367 aa; permease 1123011 3091715 BPSL0964 Burkholderia pseudomallei K96243 permease YP_107592.1 1121914 R 272560 CDS YP_107593.1 53718607 3092640 1123132..1124643 1 NC_006350.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1124643 pepA 3092640 pepA Burkholderia pseudomallei K96243 leucyl aminopeptidase YP_107593.1 1123132 D 272560 CDS YP_107594.1 53718608 3091716 1124687..1125103 1 NC_006350.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 1125103 3091716 BPSL0966 Burkholderia pseudomallei K96243 DNA polymerase III subunit chi YP_107594.1 1124687 D 272560 CDS YP_107595.1 53718609 3091713 1125125..1125835 1 NC_006350.1 hypothetical protein 1125835 3091713 BPSL0967 Burkholderia pseudomallei K96243 hypothetical protein YP_107595.1 1125125 D 272560 CDS YP_107596.1 53718610 3091714 complement(1125993..1126316) 1 NC_006350.1 Similar to Nitrosomonas europaea cytochrome c-552 precursor Cyt SWALL:C552_NITEU (SWALL:P95339) (103 aa) fasta scores: E(): 5e-12, 44.86% id in 107 aa, and to Ralstonia solanacearum probable cytochrome c transmembrane protein rsc3260 or rs02489 SWALL:Q8XUD1 (EMBL:AL646074) (141 aa) fasta scores: E(): 8.7e-12, 35.83% id in 120 aa. Possible alternative translational start site; cytochrome c protein 1126316 3091714 BPSL0968 Burkholderia pseudomallei K96243 cytochrome c protein YP_107596.1 1125993 R 272560 CDS YP_107597.1 53718611 3093888 complement(1126530..1128203) 1 NC_006350.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1128203 ilvD 3093888 ilvD Burkholderia pseudomallei K96243 dihydroxy-acid dehydratase YP_107597.1 1126530 R 272560 CDS YP_107598.1 53718612 3092725 1128381..1129376 1 NC_006350.1 Similar to Caulobacter crescentus isoleucine biosynthesis transcriptional activator IlvR or cc3045 SWALL:ILVR_CAUCR (SWALL:P52670) (296 aa) fasta scores: E(): 4.4e-49, 53.52% id in 312 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2411 or rs02707 SWALL:Q8XWR2 (EMBL:AL646070) (311 aa) fasta scores: E(): 2.7e-57, 61.93% id in 310 aa, and to Bacillus subtilis als operon regulatory protein AlsR SWALL:ALSR_BACSU (SWALL:Q04778) (302 aa) fasta scores: E(): 2.1e-30, 38.18% id in 309 aa; isoleucine biosynthesis transcriptional activator 1129376 ilvR 3092725 ilvR Burkholderia pseudomallei K96243 isoleucine biosynthesis transcriptional activator YP_107598.1 1128381 D 272560 CDS YP_107599.1 53718613 3094086 1129483..1130373 1 NC_006350.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1130373 lgt 3094086 lgt Burkholderia pseudomallei K96243 prolipoprotein diacylglyceryl transferase YP_107599.1 1129483 D 272560 CDS YP_107600.1 53718614 3093686 complement(1130741..1131478) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc2404 or rs02714 SWALL:Q8XWR6 (EMBL:AL646070) (221 aa) fasta scores: E(): 4.5e-24, 53.37% id in 163 aa, and to Pseudomonas aeruginosa hypothetical protein pa4495 SWALL:Q9HVS6 (EMBL:AE004863) (236 aa) fasta scores: E(): 2.3e-19, 36.29% id in 248 aa; Downstream repeat region(cggagca)4 and (cggacacggaca)3; hypothetical protein 1131478 3093686 BPSL0972 Burkholderia pseudomallei K96243 hypothetical protein YP_107600.1 1130741 R 272560 CDS YP_107601.1 53718615 3093687 complement(1131677..1132138) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2403 or rs02715 SWALL:Q8XWR7 (EMBL:AL646070) (168 aa) fasta scores: E(): 2.2e-43, 72.84% id in 151 aa, and to Xanthomonas campestris hypothetical protein xcc3264 SWALL:Q8P5S2 (EMBL:AE012443) (147 aa) fasta scores: E(): 2.9e-30, 59.31% id in 145 aa. Possible alternative translational start site; hypothetical protein 1132138 3093687 BPSL0973 Burkholderia pseudomallei K96243 hypothetical protein YP_107601.1 1131677 R 272560 CDS YP_107602.1 53718616 3092528 complement(1132478..1132792) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2402 or rs02716 SWALL:Q8XWR8 (EMBL:AL646070) (105 aa) fasta scores: E(): 1.1e-11, 44.55% id in 101 aa, and to Pasteurella multocida hypothetical protein pm1722 SWALL:Q9CKA3 (EMBL:AE006208) (100 aa) fasta scores: E(): 8.4e-06, 32% id in 100 aa; hypothetical protein 1132792 3092528 BPSL0974 Burkholderia pseudomallei K96243 hypothetical protein YP_107602.1 1132478 R 272560 CDS YP_107603.1 53718617 3092529 complement(1132789..1133139) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2401 or rs02717 SWALL:Q8XWR9 (EMBL:AL646070) (106 aa) fasta scores: E(): 2.9e-06, 45.21% id in 115 aa; Upstream repeat region (cgc)4; hypothetical protein 1133139 3092529 BPSL0975 Burkholderia pseudomallei K96243 hypothetical protein YP_107603.1 1132789 R 272560 CDS YP_107604.1 53718618 3093408 1133678..1135735 1 NC_006350.1 Similar to Ralstonia solanacearum probable outer membrane receptor protein rsc2400 or rs02718 SWALL:Q8XWS0 (EMBL:AL646070) (621 aa) fasta scores: E(): 5.2e-91, 49.1% id in 615 aa, and to Salmonella typhimurium vitamin B12 receptor precursor BtuB or stm4130 SWALL:BTUB_SALTY (SWALL:P37409) (614 aa) fasta scores: E(): 2.7e-32, 28.52% id in 603 aa. CDS is extended at the N-terminus in comparison to orthologues; outer membrane receptor protein 1135735 3093408 BPSL0976 Burkholderia pseudomallei K96243 outer membrane receptor protein YP_107604.1 1133678 D 272560 CDS YP_107605.1 53718619 3093409 1135814..1136815 1 NC_006350.1 Similar to Pseudomonas aeruginosa ABC-type permease PhuU SWALL:O68878 (EMBL:AF055999) (326 aa) fasta scores: E(): 5.1e-33, 45.06% id in 324 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc2399 or rs02719 SWALL:Q8XWS1 (EMBL:AL646070) (335 aa) fasta scores: E(): 1.4e-60, 58.51% id in 323 aa; transmembrane ABC transporter permease 1136815 3093409 BPSL0977 Burkholderia pseudomallei K96243 transmembrane ABC transporter permease YP_107605.1 1135814 D 272560 CDS YP_107606.1 53718620 3094575 1136812..1137642 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2398 or rs02720 SWALL:Q8XWS2 (EMBL:AL646070) (279 aa) fasta scores: E(): 3.4e-40, 52.45% id in 265 aa, and to Yersinia enterocolitica ferric enterochelin transport ATP-binding protein FepC SWALL:Q9X3S3 (EMBL:AF082879) (272 aa) fasta scores: E(): 2.4e-20, 35.71% id in 266 aa; ATP-binding ABC transporter protein 1137642 3094575 BPSL0978 Burkholderia pseudomallei K96243 ATP-binding ABC transporter protein YP_107606.1 1136812 D 272560 CDS YP_107607.1 53718621 3094576 1137686..1138744 1 NC_006350.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1138744 cobT 3094576 cobT Burkholderia pseudomallei K96243 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_107607.1 1137686 D 272560 CDS YP_107608.1 53718622 3092916 1138751..1139509 1 NC_006350.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 1139509 cobS 3092916 cobS Burkholderia pseudomallei K96243 cobalamin synthase YP_107608.1 1138751 D 272560 CDS YP_107609.1 53718623 3092917 1139494..1140093 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2395 or rs02727 SWALL:Q8XWS5 (EMBL:AL646069) (192 aa) fasta scores: E(): 1.3e-22, 43.09% id in 181 aa, and to Rhodobacter capsulatus BluF protein SWALL:O68088 (EMBL:AF010496) (195 aa) fasta scores: E(): 2.5e-06, 38.33% id in 180 aa, and to Escherichia coli alpha-ribazole-5'-phosphate phosphatase CobC or PhpB or b0638 SWALL:COBC_ECOLI (SWALL:P52086) (203 aa) fasta scores: E(): 7.1e-05, 29.94% id in 187 aa; phosphoglycerate mutase 1140093 3092917 BPSL0981 Burkholderia pseudomallei K96243 phosphoglycerate mutase YP_107609.1 1139494 D 272560 CDS YP_107610.1 53718624 3092134 complement(1140236..1141072) 1 NC_006350.1 hypothetical protein 1141072 3092134 BPSL0982 Burkholderia pseudomallei K96243 hypothetical protein YP_107610.1 1140236 R 272560 CDS YP_107611.1 53718625 3091770 complement(1141238..1142170) 1 NC_006350.1 Similar to Salmonella typhimurium vitamin B12 transport protein BtuF or stm0206 SWALL:BTUF_SALTY (SWALL:Q8ZRP7) (266 aa) fasta scores: E(): 1.3e-20, 38.03% id in 255 aa, and to Ralstonia solanacearum probable substrate-binding periplasmic rsc2394 or rs02728 SWALL:Q8XWS6 (EMBL:AL646069) (313 aa) fasta scores: E(): 6.9e-67, 59.54% id in 309 aa, and to Escherichia coli vitamin B12 transport protein BtuF or b0158 SWALL:BTUF_ECOLI (SWALL:P37028) (266 aa) fasta scores: E(): 2.8e-22, 38.03% id in 255 aa; vitamin B12 transport protein 1142170 btuF 3091770 btuF Burkholderia pseudomallei K96243 vitamin B12 transport protein YP_107611.1 1141238 R 272560 CDS YP_107612.1 53718626 3093515 complement(1142176..1143228) 1 NC_006350.1 cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase 1143228 cobC 3093515 cobC Burkholderia pseudomallei K96243 threonine-phosphate decarboxylase YP_107612.1 1142176 R 272560 CDS YP_107613.1 53718627 3092135 complement(1143221..1144165) 1 NC_006350.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1144165 cobD 3092135 cobD Burkholderia pseudomallei K96243 cobalamin biosynthesis protein YP_107613.1 1143221 R 272560 CDS YP_107614.1 53718628 3091756 complement(1144159..1144716) 1 NC_006350.1 Similar to Pseudomonas denitrificans bifunctional cobalamin biosynthesis protein [includes: cobinamide kinase; cobinamide phosphate guanylyltransferase] CobP SWALL:COBP_PSEDE (SWALL:P29931) (173 aa) fasta scores: E(): 1.1e-25, 46.78% id in 171 aa, and to Ralstonia solanacearum probable cobalamin biosynthesis bifunctional protein: cobinamide kinase and cobinamide phosphate guanylyltransferase CobP or rsc2391 or rs02758 SWALL:Q8XWS9 (EMBL:AL646069) (193 aa) fasta scores: E(): 1.8e-31, 55.49% id in 191 aa, and to Escherichia coli, and Escherichia coli O157:H7 bifunctional cobalamin biosynthesis protein [includes: cobinamide kinase; cobinamide phosphate guanylyltransferase] b1993 or z3153 or ecs2788 SWALL:COBU_ECOLI (SWALL:P46886) (181 aa) fasta scores: E(): 1.8e-19, 41.98% id in 181 aa; Upstream repeat region (gccaacgccaac)4; bifunctional cobalamin biosynthesis protein 1144716 3091756 BPSL0986 Burkholderia pseudomallei K96243 bifunctional cobalamin biosynthesis protein YP_107614.1 1144159 R 272560 CDS YP_107615.1 53718629 3093489 1144873..1146333 1 NC_006350.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1146333 cobQ 3093489 cobQ Burkholderia pseudomallei K96243 cobyric acid synthase YP_107615.1 1144873 D 272560 CDS YP_107616.1 53718630 3091757 1146614..1147030 1 NC_006350.1 Similar to Xanthomonas axonopodis hypothetical protein xac3707 SWALL:Q8PGB0 (EMBL:AE012020) (136 aa) fasta scores: E(): 3.2e-20, 55.28% id in 123 aa; hypothetical protein 1147030 3091757 BPSL0988 Burkholderia pseudomallei K96243 hypothetical protein YP_107616.1 1146614 D 272560 CDS YP_107617.1 53718631 3094388 1147399..1148022 1 NC_006350.1 Similar to Pseudomonas alcaligenes plasmid pRA2 ParA homolog SWALL:Q9XAW8 (EMBL:U88088) (212 aa) fasta scores: E(): 3.8e-09, 32.1% id in 190 aa, and to Ralstonia solanacearum partition-related protein rsc2389 or rs02760 SWALL:Q8XWT1 (EMBL:AL646069) (217 aa) fasta scores: E(): 2e-48, 65.68% id in 204 aa, and to Xanthomonas campestris partition protein xcc0174 SWALL:AAM39493 (EMBL:AE012113) (210 aa) fasta scores: E(): 9.4e-17, 32.86% id in 213 aa; ParA family ATPase 1148022 3094388 BPSL0989 Burkholderia pseudomallei K96243 ParA family ATPase YP_107617.1 1147399 D 272560 CDS YP_107618.1 53718632 3093259 complement(1148137..1148523) 1 NC_006350.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 1148523 panD 3093259 panD Burkholderia pseudomallei K96243 aspartate alpha-decarboxylase YP_107618.1 1148137 R 272560 CDS YP_107619.1 53718633 3093228 complement(1148576..1149415) 1 NC_006350.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1149415 panC 3093228 panC Burkholderia pseudomallei K96243 pantoate--beta-alanine ligase YP_107619.1 1148576 R 272560 CDS YP_107620.1 53718634 3094389 complement(1150167..1151042) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2386 or rs02764 SWALL:Q8XWT4 (EMBL:AL646069) (293 aa) fasta scores: E(): 5.2e-85, 81.52% id in 276 aa, and to Neisseria meningitidis hypothetical protein nmb1504 SWALL:Q9JYN0 (EMBL:AE002500) (284 aa) fasta scores: E(): 3.6e-49, 54.44% id in 270 aa. CDS is extended at the N-terminus in comparison to some orthologues; hypothetical protein 1151042 3094389 BPSL0992 Burkholderia pseudomallei K96243 hypothetical protein YP_107620.1 1150167 R 272560 CDS YP_107621.1 53718635 3094637 complement(1151047..1151235) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2385 or rs02765 SWALL:Q8XWT5 (EMBL:AL646069) (62 aa) fasta scores: E(): 3.3e-11, 64.28% id in 56 aa, and to Neisseria meningitidis hypothetical protein nma1654 SWALL:Q9JTS3 (EMBL:AL162756) (61 aa) fasta scores: E(): 3.1e-06, 45.76% id in 59 aa; hypothetical protein 1151235 3094637 BPSL0993 Burkholderia pseudomallei K96243 hypothetical protein YP_107621.1 1151047 R 272560 CDS YP_107622.1 53718636 3094638 1151442..1153259 1 NC_006350.1 C-terminal region is similar to Ralstonia solanacearum lipoprotein rsc2384 or rs02766 SWALL:Q8XWT6 (EMBL:AL646069) (589 aa) fasta scores: E(): 7.4e-108, 48.16% id in 571 aa, and to the C-terminal region of Neisseria meningitidis outer membrane protein nma0296 SWALL:Q9JWM5 (EMBL:AL162752) (615 aa) fasta scores: E(): 3.7e-43, 28.26% id in 566 aa; hypothetical protein 1153259 3094638 BPSL0994 Burkholderia pseudomallei K96243 hypothetical protein YP_107622.1 1151442 D 272560 CDS YP_107623.1 53718637 3092184 1153273..1157391 1 NC_006350.1 Similar to Ralstonia solanacearum signal peptide protein rsc2383 or rs06185 SWALL:Q8XWT7 (EMBL:AL646069) (1299 aa) fasta scores: E(): 3.6e-120, 42.81% id in 1371 aa, and to Neisseria meningitidis hypothetical protein nmb2135 SWALL:Q9JXB6 (EMBL:AE002561) (1405 aa) fasta scores: E(): 8.4e-29, 26.91% id in 1475 aa; hypothetical protein 1157391 3092184 BPSL0995 Burkholderia pseudomallei K96243 hypothetical protein YP_107623.1 1153273 D 272560 CDS YP_107624.1 53718638 3092185 1157739..1158449 1 NC_006350.1 Similar to Anabaena sp. hypothetical protein all0326 SWALL:Q8YZX8 (EMBL:AP003582) (224 aa) fasta scores: E(): 1.4e-07, 26.14% id in 218 aa; hypothetical protein 1158449 3092185 BPSL0996 Burkholderia pseudomallei K96243 hypothetical protein YP_107624.1 1157739 D 272560 CDS YP_107625.1 53718639 3093682 1158446..1159459 1 NC_006350.1 Similar to Streptomyces argillaceus O-methyltransferase MtmMI SWALL:Q9R6R8 (EMBL:AF077869) (345 aa) fasta scores: E(): 1.6e-15, 29.54% id in 308 aa, and to Streptomyces sp. JP95 methyltransferase GrhL SWALL:AAM33664 (EMBL:AF509565) (343 aa) fasta scores: E(): 1.8e-20, 30.35% id in 313 aa, and to Bos taurus hydroxyindole O-methyltransferase ASMT SWALL:HIOM_BOVIN (SWALL:P10950) (345 aa) fasta scores: E(): 1.3e-19, 30.44% id in 335 aa; methyltransferase 1159459 3093682 BPSL0997 Burkholderia pseudomallei K96243 methyltransferase YP_107625.1 1158446 D 272560 CDS YP_107626.1 53718640 3091950 complement(1159815..1161992) 1 NC_006350.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1161992 metG 3091950 metG Burkholderia pseudomallei K96243 methionyl-tRNA synthetase YP_107626.1 1159815 R 272560 CDS YP_107627.1 53718641 3093683 complement(1162474..1163121) 1 NC_006350.1 Similar to Pseudomonas syringae outer membrane porin F precursor OprF SWALL:PORF_PSESY (SWALL:P22263) (344 aa) fasta scores: E(): 1.4e-08, 36.57% id in 175 aa, and to Ralstonia solanacearum probable transmembrane protein rsc2380 or rs01165 SWALL:Q8XWU0 (EMBL:AL646069) (209 aa) fasta scores: E(): 2.2e-33, 57.69% id in 208 aa; OmpA family transmembrane protein 1163121 3093683 BPSL0999 Burkholderia pseudomallei K96243 OmpA family transmembrane protein YP_107627.1 1162474 R 272560 CDS YP_107628.1 53718642 3093990 1163502..1164590 1 NC_006350.1 Similar to Escherichia coli Mrp protein or b2113 SWALL:MRP_ECOLI (SWALL:P21590) (369 aa) fasta scores: E(): 1.5e-62, 54% id in 337 aa, and to Ralstonia solanacearum probable ATP-binding protein Mrp or rsc2379 or rs01166 SWALL:Q8XWU1 (EMBL:AL646069) (362 aa) fasta scores: E(): 2e-93, 72.65% id in 362 aa; ATP-binding protein 1164590 3093990 BPSL1000 Burkholderia pseudomallei K96243 ATP-binding protein YP_107628.1 1163502 D 272560 CDS YP_107629.1 53718643 3093991 1164723..1165262 1 NC_006350.1 Similar although longer in its N-terminal region than Xanthomonas campestris pv. campestris str. ATCC33913 superoxide dismutase SodC2 SWALL:AAM39510 (EMBL:AE012115) (165 aa) fasta scores: E(): 7.1e-15, 43.44% id in 145 aa, and to Ovis aries superoxide dismutase [Cu-Zn] Sod1 SWALL:SODC_SHEEP (SWALL:P09670) (151 aa) fasta scores: E(): 1.4e-08, 37.03% id in 135 aa; membrane-attached superoxide dismutase 1165262 3093991 BPSL1001 Burkholderia pseudomallei K96243 membrane-attached superoxide dismutase YP_107629.1 1164723 D 272560 CDS YP_107630.1 53718644 3094702 1165366..1165935 1 NC_006350.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1165935 dcd 3094702 dcd Burkholderia pseudomallei K96243 deoxycytidine triphosphate deaminase YP_107630.1 1165366 D 272560 CDS YP_107631.1 53718645 3093996 1166038..1168317 1 NC_006350.1 Similar to, although longer in its N-terminal region than, Escherichia coli ornithine decarboxylase, inducible SpeF or b0693 SWALL:DCOS_ECOLI (SWALL:P24169) (732 aa) fasta scores: E(): 4.5e-73, 32.64% id in 680 aa, and to Ralstonia solanacearum probable biodegradative arginine decarboxylase rsc2365 or rs01181 SWALL:Q8XWV5 (EMBL:AL646069) (759 aa) fasta scores: E(): 1.1e-198, 79.68% id in 768 aa; ornithine decarboxylase 1168317 3093996 BPSL1003 Burkholderia pseudomallei K96243 ornithine decarboxylase YP_107631.1 1166038 D 272560 CDS YP_107632.1 53718646 3093997 1168320..1169042 1 NC_006350.1 hypothetical protein 1169042 3093997 BPSL1004 Burkholderia pseudomallei K96243 hypothetical protein YP_107632.1 1168320 D 272560 CDS YP_107633.1 53718647 3091590 complement(1169176..1169850) 1 NC_006350.1 Similar to Vibrio cholerae CbbY family protein vca0102 SWALL:Q9KN63 (EMBL:AE004353) (219 aa) fasta scores: E(): 2.9e-21, 39.81% id in 211 aa, and to Escherichia coli protein YfbT or b2293 SWALL:YFBT_ECOLI (SWALL:P77625) (216 aa) fasta scores: E(): 5.4e-11, 34.29% id in 207 aa; hydrolase 1169850 3091590 BPSL1005 Burkholderia pseudomallei K96243 hydrolase YP_107633.1 1169176 R 272560 CDS YP_107634.1 53718648 3092554 complement(1169883..1171292) 1 NC_006350.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1171292 argH 3092554 argH Burkholderia pseudomallei K96243 argininosuccinate lyase YP_107634.1 1169883 R 272560 CDS YP_107635.1 53718649 3091591 complement(1171461..1173761) 1 NC_006350.1 Similar, although shorter in its N-terminal region, to Escherichia coli outer membrane usher protein precursor FanD SWALL:FAND_ECOLI (SWALL:P12050) (783 aa) fasta scores: E(): 7.7e-14, 23.63% id in 732 aa, and to Ralstonia solanacearum probable signal peptide protein rsp1498 or rs03043 SWALL:Q8XPY8 (EMBL:AL646085) (786 aa) fasta scores: E(): 2.6e-122, 46.55% id in 769 aa. Possible gene remnant; fimbriae usher protein 1173761 3091591 BPSL1007 Burkholderia pseudomallei K96243 fimbriae usher protein YP_107635.1 1171461 R 272560 CDS YP_107636.1 53718650 3091868 complement(1174516..1175226) 1 NC_006350.1 Similar to, although shorted in its N-terminal region than, Escherichia coli chaperone protein precursor EcpD or b0140 SWALL:ECPD_ECOLI (SWALL:P33128) (246 aa) fasta scores: E(): 0.00033, 30.58% id in 206 aa, and to Ralstonia solanacearum pili assembly chaperone transmembrane protein rsp1499 or rs03042 SWALL:Q8XPY7 (EMBL:AL646085) (241 aa) fasta scores: E(): 7.3e-28, 44% id in 225 aa; exported fimbriae-related chaperone 1175226 3091868 BPSL1008 Burkholderia pseudomallei K96243 exported fimbriae-related chaperone YP_107636.1 1174516 R 272560 CDS YP_107637.1 53718651 3091869 complement(1175234..1175752) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsp1500 or rs03041 SWALL:Q8XPY6 (EMBL:AL646085) (173 aa) fasta scores: E(): 1e-30, 62.65% id in 166 aa, and to Agrobacterium tumefaciens hypothetical protein atu4733 or agr_l_295 SWALL:Q8U6S3 (EMBL:AE009401) (177 aa) fasta scores: E(): 1.4e-20, 43.01% id in 186 aa; hypothetical protein 1175752 3091869 BPSL1009 Burkholderia pseudomallei K96243 hypothetical protein YP_107637.1 1175234 R 272560 CDS YP_107638.1 53718652 3092911 1176147..1177136 1 NC_006350.1 Similar to Agrobacterium tumefaciens hypothetical protein atu4730 or agr_l_303 SWALL:Q8U6S6 (EMBL:AE009401) (316 aa) fasta scores: E(): 8e-32, 39.75% id in 327 aa, and to Xanthomonas axonopodis pv. citri str. 306 conserved hypothetical protein xac1424 SWALL:AAM36295 (EMBL:AE011774) (342 aa) fasta scores: E(): 1.1e-16, 35.04% id in 351 aa; lipoprotein 1177136 3092911 BPSL1010 Burkholderia pseudomallei K96243 lipoprotein YP_107638.1 1176147 D 272560 CDS YP_107639.1 53718653 3092912 complement(1177309..1178124) 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein mll1636 SWALL:Q98K51 (EMBL:AP002997) (290 aa) fasta scores: E(): 1.1e-36, 43.13% id in 262 aa, and to Rhizobium loti probable DNA-binding protein mlr2155 SWALL:Q98J14 (EMBL:AP002999) (276 aa) fasta scores: E(): 2.6e-27, 39.92% id in 253 aa; DNA-binding protein 1178124 3092912 BPSL1011 Burkholderia pseudomallei K96243 DNA-binding protein YP_107639.1 1177309 R 272560 CDS YP_107640.1 53718654 3091472 1178289..1179062 1 NC_006350.1 Similar to Serratia marcescens biotin synthesis protein BioC SWALL:BIOC_SERMA (SWALL:P36571) (255 aa) fasta scores: E(): 2.9e-07, 34.13% id in 167 aa, and to Salmonella typhimurium methyltransferase in menaquinone/biotin biosynthesis YafE or stm0259 SWALL:Q8ZRM3 (EMBL:AE008706) (256 aa) fasta scores: E(): 7.8e-44, 52.77% id in 252 aa; biotin biosyntehsis-like protein 1179062 3091472 BPSL1012 Burkholderia pseudomallei K96243 biotin biosyntehsis-like protein YP_107640.1 1178289 D 272560 CDS YP_107641.1 53718655 3091473 complement(1179480..1182464) 1 NC_006350.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 1182464 3091473 BPSL1013 Burkholderia pseudomallei K96243 phosphoenolpyruvate carboxylase YP_107641.1 1179480 R 272560 CDS YP_107642.1 53718656 3093060 1182577..1182756 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 1182756 3093060 BPSL1014 Burkholderia pseudomallei K96243 hypothetical protein YP_107642.1 1182577 D 272560 CDS YP_107643.1 53718657 3092988 1182791..1183780 1 NC_006350.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1183780 hemC 3092988 hemC Burkholderia pseudomallei K96243 porphobilinogen deaminase YP_107643.1 1182791 D 272560 CDS YP_107644.1 53718658 3093061 1183777..1185759 1 NC_006350.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis; bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase 1185759 3093061 BPSL1016 Burkholderia pseudomallei K96243 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase YP_107644.1 1183777 D 272560 CDS YP_107645.1 53718659 3091801 1185764..1186954 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 HemY protein or b3802 or z5316 or ecs4732 SWALL:HEMY_ECOLI (SWALL:P09128) (398 aa) fasta scores: E(): 3.8e-08, 23.27% id in 391 aa, and to Ralstonia solanacearum protein porphyrin biosynthesis rsc2355 or rs01191 SWALL:Q8XWW5 (EMBL:AL646069) (397 aa) fasta scores: E(): 2e-69, 50.63% id in 393 aa; porphyrin biosynthesis-like protein 1186954 3091801 BPSL1017 Burkholderia pseudomallei K96243 porphyrin biosynthesis-like protein YP_107645.1 1185764 D 272560 CDS YP_107646.1 53718660 3091802 complement(1187123..1188430) 1 NC_006350.1 Similar to Agrobacterium vitis tartrate transporter TtuB SWALL:TUB3_AGRVI (SWALL:P70786) (449 aa) fasta scores: E(): 4.4e-75, 48.32% id in 418 aa, and to Ralstonia solanacearum probable permease transmembrane protein rsc2352 or rs01194 SWALL:Q8XWW8 (EMBL:AL646069) (442 aa) fasta scores: E(): 1.2e-121, 72.1% id in 441 aa; permease transmembrane protein 1188430 3091802 BPSL1018 Burkholderia pseudomallei K96243 permease transmembrane protein YP_107646.1 1187123 R 272560 CDS YP_107647.1 53718661 3092104 complement(1188469..1189227) 1 NC_006350.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1189227 fabG 3092104 fabG Burkholderia pseudomallei K96243 3-ketoacyl-ACP reductase YP_107647.1 1188469 R 272560 CDS YP_107648.1 53718662 3092105 complement(1189316..1190755) 1 NC_006350.1 Similar to Escherichia coli aldehyde dehydrogenase AldH or b1300 SWALL:DHAL_ECOLI (SWALL:P23883) (495 aa) fasta scores: E(): 2.3e-61, 41.12% id in 479 aa, and to Ralstonia solanacearum probable aldehyde dehydrogenase oxidoreductase rsc2350 or rs01196 SWALL:Q8XWX0 (EMBL:AL646069) (478 aa) fasta scores: E(): 5.1e-138, 73.31% id in 476 aa; aldehyde dehydrogenase 1190755 3092105 BPSL1020 Burkholderia pseudomallei K96243 aldehyde dehydrogenase YP_107648.1 1189316 R 272560 CDS YP_107649.1 53718663 3094000 1190916..1191443 1 NC_006350.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 1191443 ppa 3094000 ppa Burkholderia pseudomallei K96243 inorganic pyrophosphatase YP_107649.1 1190916 D 272560 CDS YP_107650.1 53718664 3093404 complement(1191502..1192266) 1 NC_006350.1 Possible gene remnant. Only N-terminal region similar to Xanthomonas axonopodis pv. citri str. 306 conserved hypothetical protein xac3202 SWALL:AAM38046 (EMBL:AE011966) (102 aa) fasta scores: E(): 3.9e-06, 49.46% id in 93 aa, and to Escherichia coli hypothetical protein YhbQ or b3155 SWALL:YHBQ_ECOLI (SWALL:P45472) (100 aa) fasta scores: E(): 0.00018, 44.89% id in 98 aa. C-terminal region presents no database matches; hypothetical protein 1192266 3093404 BPSL1022 Burkholderia pseudomallei K96243 hypothetical protein YP_107650.1 1191502 R 272560 CDS YP_107651.1 53718665 3094827 complement(1193265..1194443) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2348 or rs01198 SWALL:Q8XWX2 (EMBL:AL646069) (408 aa) fasta scores: E(): 1.1e-98, 62.43% id in 394 aa, and to Pseudomonas aeruginosa hypothetical protein pa3230 SWALL:Q9HZ10 (EMBL:AE004746) (374 aa) fasta scores: E(): 2.4e-63, 47.48% id in 377 aa; hypothetical protein 1194443 3094827 BPSL1025 Burkholderia pseudomallei K96243 hypothetical protein YP_107651.1 1193265 R 272560 CDS YP_107652.1 53718666 3092495 1194534..1196264 1 NC_006350.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1196264 nadE 3092495 nadE Burkholderia pseudomallei K96243 NAD synthetase YP_107652.1 1194534 D 272560 CDS YP_107653.1 53718667 3093736 1196325..1196663 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi nitrogen regulatory protein P-II 1 GlnB or b2553 or z3829 or ecs3419 or stm2561 or sty2808 SWALL:GLNB_ECOLI (SWALL:P05826) (112 aa) fasta scores: E(): 3.1e-30, 77.67% id in 112 aa, and to Ralstonia solanacearum probable nitrogen regulatory P-II transcription regulator protein rsc2345 or rs01201 SWALL:Q8XWX5 (EMBL:AL646069) (112 aa) fasta scores: E(): 6.7e-32, 83.92% id in 112 aa; nitrogen regulatory protein P-II 2 1196663 glnB2 3093736 glnB2 Burkholderia pseudomallei K96243 nitrogen regulatory protein P-II 2 YP_107653.1 1196325 D 272560 CDS YP_107654.1 53718668 3092420 complement(1197036..1198256) 1 NC_006350.1 Highly similar to to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 2.5e-139, 78.57% id in 406 aa, and to Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 1.5e-161, 99.22% id in 386 aa. CDS is extended at the N-terminus in comparison to B. mallei protein; transposase 1198256 tnpA 3092420 tnpA Burkholderia pseudomallei K96243 transposase YP_107654.1 1197036 R 272560 CDS YP_107655.1 53718669 3092496 complement(1198437..1199537) 1 NC_006350.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.9e-11, 29.97% id in 387 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsc2136 or rs01467 SWALL:Q8XXH8 (EMBL:AL646068) (352 aa) fasta scores: E(): 3.6e-43, 41.22% id in 376 aa; exported outer membrane porin 1199537 3092496 BPSL1029 Burkholderia pseudomallei K96243 exported outer membrane porin YP_107655.1 1198437 R 272560 CDS YP_107656.1 53718670 3094486 complement(1200419..1201198) 1 NC_006350.1 Similar to Escherichia coli histidine transport ATP-binding protein HisP or b2306 SWALL:HISP_ECOLI (SWALL:P07109) (257 aa) fasta scores: E(): 4.6e-62, 70.86% id in 254 aa, and to Pseudomonas aeruginosa arginine/ornithine transport ATP-binding protein pa0892 SWALL:AOTP_PSEAE (SWALL:O30506) (254 aa) fasta scores: E(): 4e-62, 71.76% id in 255 aa; histidine transport ATP-binding protein 1201198 hisP 3094486 hisP Burkholderia pseudomallei K96243 histidine transport ATP-binding protein YP_107656.1 1200419 R 272560 CDS YP_107657.1 53718671 3094354 complement(1201221..1201934) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 histidine transport system permease HisM or b2307 or z3569 or ecs3191 SWALL:HISM_ECOLI (SWALL:P20091) (238 aa) fasta scores: E(): 3.6e-64, 67.09% id in 234 aa, and to Pseudomonas aeruginosa histidine transport system permease pa2925 SWALL:Q9HZS2 (EMBL:AE004718) (237 aa) fasta scores: E(): 6.9e-66, 68.93% id in 235 aa; histidine transport system permease 1201934 hisM 3094354 hisM Burkholderia pseudomallei K96243 histidine transport system permease YP_107657.1 1201221 R 272560 CDS YP_107658.1 53718672 3094529 complement(1201931..1202620) 1 NC_006350.1 Similar to Escherichia coli histidine transport system permease HisQ or b2308 SWALL:HISQ_ECOLI (SWALL:P52094) (228 aa) fasta scores: E(): 5.8e-53, 62.11% id in 227 aa, and to Pseudomonas aeruginosa histidine transport system permease pa2924 SWALL:Q9HZS3 (EMBL:AE004718) (229 aa) fasta scores: E(): 2.8e-57, 68.14% id in 226 aa; histidine transport system permease 1202620 hisQ 3094529 hisQ Burkholderia pseudomallei K96243 histidine transport system permease YP_107658.1 1201931 R 272560 CDS YP_107659.1 53718673 3094022 complement(1202831..1203607) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 histidine-binding periplasmic protein precursor HisJ or b2309 or z3571 or ecs3193 SWALL:HISJ_ECOLI (SWALL:P39182) (260 aa) fasta scores: E(): 3.2e-55, 55.81% id in 258 aa, and to Salmonella typhi histidine-binding periplasmic protein sty2584 SWALL:Q8Z510 (EMBL:AL627274) (260 aa) fasta scores: E(): 7.6e-55, 55.81% id in 258 aa; histidine-binding periplasmic protein 1203607 hisJ 3094022 hisJ Burkholderia pseudomallei K96243 histidine-binding periplasmic protein YP_107659.1 1202831 R 272560 CDS YP_107660.1 53718674 3091914 1204000..1204698 1 NC_006350.1 Similar to Ralstonia solanacearum pirin-like protein rsc2208 or rs01391 SWALL:Q8XXA8 (EMBL:AL646068) (232 aa) fasta scores: E(): 1.8e-53, 58.44% id in 231 aa, and to Lycopersicon esculentum pirin-like protein SWALL:PIRL_LYCES (SWALL:Q9SEE4) (291 aa) fasta scores: E(): 2.3e-09, 33.33% id in 171 aa; hypothetical protein 1204698 3091914 BPSL1034 Burkholderia pseudomallei K96243 hypothetical protein YP_107660.1 1204000 D 272560 CDS YP_107661.1 53718675 3091915 complement(1205046..1205744) 1 NC_006350.1 hypothetical protein 1205744 3091915 BPSL1035 Burkholderia pseudomallei K96243 hypothetical protein YP_107661.1 1205046 R 272560 CDS YP_107662.1 53718676 3094647 1205833..1206558 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi transcriptional regulatory protein OmpR SWALL:OMPR_ECOLI (SWALL:P03025) (239 aa) fasta scores: E(): 5.3e-42, 52.15% id in 232 aa, and to Ralstonia solanacearum probable two component response regulator transcription regulator protein rsp1196 or rs03140 SWALL:Q8XQM6 (EMBL:AL646083) (245 aa) fasta scores: E(): 7.1e-56, 63.33% id in 240 aa; two-component system, response regulator 1206558 3094647 BPSL1036 Burkholderia pseudomallei K96243 two-component system, response regulator YP_107662.1 1205833 D 272560 CDS YP_107663.1 53718677 3094648 1206542..1207855 1 NC_006350.1 Similar to Escherichia coli osmolarity sensor protein EnvZ or OmpB or PerA or Tpo or b3404 SWALL:ENVZ_ECOLI (SWALL:P02933) (450 aa) fasta scores: E(): 1.9e-24, 29.69% id in 431 aa, and to Ralstonia solanacearum probable two component transmembrane sensor kinase transcription regulator protein rsp1195 or rs03139 SWALL:Q8XQM7 (EMBL:AL646083) (431 aa) fasta scores: E(): 2.2e-59, 44.86% id in 428 aa; two-component system, sensor kinase 1207855 3094648 BPSL1037 Burkholderia pseudomallei K96243 two-component system, sensor kinase YP_107663.1 1206542 D 272560 CDS YP_107664.1 53718678 3093799 complement(1207929..1208195) 1 NC_006350.1 hypothetical protein 1208195 3093799 BPSL1038 Burkholderia pseudomallei K96243 hypothetical protein YP_107664.1 1207929 R 272560 CDS YP_107665.1 53718679 3093800 complement(1208322..1208597) 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 1208597 3093800 BPSL1038a Burkholderia pseudomallei K96243 hypothetical protein YP_107665.1 1208322 R 272560 CDS YP_107666.1 53718680 3091509 1208692..1210449 1 NC_006350.1 Similar to Xylella fastidiosa ABC transporter nitrate permease xf0411 SWALL:Q9PG91 (EMBL:AE003892) (584 aa) fasta scores: E(): 9.1e-137, 58.16% id in 588 aa, and to Ralstonia solanacearum transmembrane ABC transporter protein rsc3371 or rs02646 SWALL:Q8XU23 (EMBL:AL646075) (586 aa) fasta scores: E(): 1.6e-124, 53.6% id in 569 aa; ABC transporter membrane protein 1210449 3091509 BPSL1039 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_107666.1 1208692 D 272560 CDS YP_107667.1 53718681 3091510 1210503..1211843 1 NC_006350.1 Similar to Xylella fastidiosa nitrate ABC transporter ATP-binding protein xf0412 SWALL:Q9PG90 (EMBL:AE003892) (433 aa) fasta scores: E(): 4.1e-86, 61.79% id in 424 aa, and to Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc3372 or rs02647 SWALL:Q8XU22 (EMBL:AL646075) (449 aa) fasta scores: E(): 1.9e-67, 50.7% id in 426 aa; ABC transporter ATP-binding protein 1211843 3091510 BPSL1040 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_107667.1 1210503 D 272560 CDS YP_107668.1 53718682 3092993 complement(1212010..1212171) 1 NC_006350.1 hypothetical protein 1212171 3092993 BPSL1041 Burkholderia pseudomallei K96243 hypothetical protein YP_107668.1 1212010 R 272560 CDS YP_107669.1 53718683 3092994 complement(1212228..1212734) 1 NC_006350.1 lipoprotein 1212734 3092994 BPSL1042 Burkholderia pseudomallei K96243 lipoprotein YP_107669.1 1212228 R 272560 CDS YP_107670.1 53718684 3093837 complement(1212731..1213282) 1 NC_006350.1 lipoprotein 1213282 3093837 BPSL1043 Burkholderia pseudomallei K96243 lipoprotein YP_107670.1 1212731 R 272560 CDS YP_107671.1 53718685 3092835 1213901..1215319 1 NC_006350.1 UDP-forming; Similar to Escherichia coli alpha,alpha-trehalose-phosphate synthase [UDP-forming] OtsA or b1896 SWALL:OTSA_ECOLI (SWALL:P31677) (473 aa) fasta scores: E(): 3.6e-95, 51.94% id in 464 aa, and to Ralstonia solanacearum probable alpha,alpha-trehalose-phosphate synthase rsp1105 or rs02613 SWALL:Q8XQW3 (EMBL:AL646082) (465 aa) fasta scores: E(): 2.4e-118, 63.93% id in 463 aa; alpha,alpha-trehalose-phosphate synthase 1215319 otsA 3092835 otsA Burkholderia pseudomallei K96243 alpha,alpha-trehalose-phosphate synthase YP_107671.1 1213901 D 272560 CDS YP_107672.1 53718686 3093838 1215312..1215914 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein mlr1469 SWALL:Q98KH7 (EMBL:AP002997) (183 aa) fasta scores: E(): 4.1e-37, 59.64% id in 171 aa, and to Chlorobium tepidum TLS conserved hypothetical protein ct0928 SWALL:AAM72163 (EMBL:AE012858) (197 aa) fasta scores: E(): 3.2e-24, 45.97% id in 174 aa; hypothetical protein 1215914 3093838 BPSL1045 Burkholderia pseudomallei K96243 hypothetical protein YP_107672.1 1215312 D 272560 CDS YP_107673.1 53718687 3093344 complement(1216087..1216698) 1 NC_006350.1 hypothetical protein 1216698 3093344 BPSL1046 Burkholderia pseudomallei K96243 hypothetical protein YP_107673.1 1216087 R 272560 CDS YP_107674.1 53718688 3093345 1217068..1217325 1 NC_006350.1 hypothetical protein 1217325 3093345 BPSL1047 Burkholderia pseudomallei K96243 hypothetical protein YP_107674.1 1217068 D 272560 CDS YP_107675.1 53718689 3094165 complement(1217526..1218953) 1 NC_006350.1 Similar to Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA SWALL:TCMA_STRGA (SWALL:P39886) (538 aa) fasta scores: E(): 6.1e-33, 31.17% id in 417 aa, and to Yersinia pestis transport protein ypo1712 SWALL:Q8ZFJ1 (EMBL:AJ414150) (455 aa) fasta scores: E(): 1.7e-100, 61.77% id in 450 aa; sugar transport, integral membrane protein 1218953 3094165 BPSL1048 Burkholderia pseudomallei K96243 sugar transport, integral membrane protein YP_107675.1 1217526 R 272560 CDS YP_107676.1 53718690 3094166 complement(1219023..1219535) 1 NC_006350.1 Similar to Escherichia coli protein YbcL precursor or b0545 SWALL:YBCL_ECOLI (SWALL:P77368) (183 aa) fasta scores: E(): 5.1e-29, 49.39% id in 166 aa, and to Salmonella typhimurium outer membrane protein stm1081 SWALL:Q8ZQ63 (EMBL:AE008747) (182 aa) fasta scores: E(): 3.1e-24, 47.2% id in 161 aa; hypothetical protein 1219535 3094166 BPSL1049 Burkholderia pseudomallei K96243 hypothetical protein YP_107676.1 1219023 R 272560 CDS YP_107677.1 53718691 3091599 complement(1220110..1220490) 1 NC_006350.1 hypothetical protein 1220490 3091599 BPSL1050 Burkholderia pseudomallei K96243 hypothetical protein YP_107677.1 1220110 R 272560 CDS YP_107678.1 53718692 3094633 complement(1221524..1221904) 1 NC_006350.1 No significant database matches. Rich in glycine amino acid residues; lipoprotein 1221904 3094633 BPSL1053 Burkholderia pseudomallei K96243 lipoprotein YP_107678.1 1221524 R 272560 CDS YP_107679.1 53718693 3094320 1222077..1222616 1 NC_006350.1 serine protease inhibitor, inhibits trypsin and other proteases; ecotin 1222616 eco 3094320 eco Burkholderia pseudomallei K96243 ecotin YP_107679.1 1222077 D 272560 CDS YP_107680.1 53718694 3094634 complement(1222714..1223850) 1 NC_006350.1 Similar to Escherichia coli penicillin-binding protein 7 precursor PbpG or b2134 SWALL:PBP7_ECOLI (SWALL:P33364) (313 aa) fasta scores: E(): 1.8e-32, 44.35% id in 257 aa, and to Ralstonia solanacearum D-alanyl-D-alanine-endopeptidase rsc1609 or rs03972 SWALL:Q8XYZ7 (EMBL:AL646065) (375 aa) fasta scores: E(): 7.6e-44, 45.56% id in 338 aa; murein-DD-endopeptidase 1223850 3094634 BPSL1055 Burkholderia pseudomallei K96243 murein-DD-endopeptidase YP_107680.1 1222714 R 272560 CDS YP_107681.1 53718695 3093766 1224788..1225264 1 NC_006350.1 Similar to Pseudomonas aeruginosa inhibitor of vertebrate lysozyme precursor Ivy or pa3902 SWALL:IVY_PSEAE (SWALL:Q9HXB1) (153 aa) fasta scores: E(): 2.1e-16, 33.55% id in 152 aa, and to Yersinia pestis hypothetical protein precursor ypo2857 SWALL:YS57_YERPE (SWALL:P58483) (154 aa) fasta scores: E(): 1.4e-19, 34.64% id in 153 aa; hypothetical protein 1225264 3093766 BPSL1057 Burkholderia pseudomallei K96243 hypothetical protein YP_107681.1 1224788 D 272560 CDS YP_107682.1 53718696 3093171 1227014..1227298 1 NC_006350.1 Similar to, although shorter in its N-terminal region than, Ralstonia solanacearum hypothetical protein rsc2240 or rs01359 SWALL:Q8XX76 (EMBL:AL646069) (96 aa) fasta scores: E(): 5e-05, 35.52% id in 76 aa; hypothetical protein 1227298 3093171 BPSL1059 Burkholderia pseudomallei K96243 hypothetical protein YP_107682.1 1227014 D 272560 CDS YP_107683.1 53718697 3091573 1227309..1227611 1 NC_006350.1 hypothetical protein 1227611 3091573 BPSL1060 Burkholderia pseudomallei K96243 hypothetical protein YP_107683.1 1227309 D 272560 CDS YP_107684.1 53718698 3091574 1227608..1227826 1 NC_006350.1 Very low similarity to the C-terminal region of Rhizobium loti hypothetical protein msl2450 SWALL:Q98ID6 (EMBL:AP002999) (97 aa) fasta scores: E(): 6.7, 35.41% id in 48 aa; hypothetical protein 1227826 3091574 BPSL1061 Burkholderia pseudomallei K96243 hypothetical protein YP_107684.1 1227608 D 272560 CDS YP_107685.1 53718699 3092726 1228340..1228606 1 NC_006350.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1228606 infA 3092726 infA Burkholderia pseudomallei K96243 translation initiation factor IF-1 YP_107685.1 1228340 D 272560 CDS YP_107686.1 53718700 3093527 1228626..1228970 1 NC_006350.1 hypothetical protein 1228970 3093527 BPSL1063 Burkholderia pseudomallei K96243 hypothetical protein YP_107686.1 1228626 D 272560 CDS YP_107687.1 53718701 3093528 complement(1229071..1229997) 1 NC_006350.1 Similar to the N-terminal region of Pseudomonas aeruginosa probable short-chain dehydrogenase pa3324 SWALL:Q9HYS1 (EMBL:AE004754) (592 aa) fasta scores: E(): 7.6e-35, 35.19% id in 304 aa, and to Mycobacterium tuberculosis probable oxidoreductase rv2214c or mt2270 or mtcy190.25c SWALL:EPHD_MYCTU (SWALL:Q10402) (592 aa) fasta scores: E(): 7.3e-26, 32.78% id in 302 aa; dehydrogenase 1229997 3093528 BPSL1064 Burkholderia pseudomallei K96243 dehydrogenase YP_107687.1 1229071 R 272560 CDS YP_107688.1 53718702 3093116 complement(1230018..1231604) 1 NC_006350.1 hypothetical protein 1231604 3093116 BPSL1065 Burkholderia pseudomallei K96243 hypothetical protein YP_107688.1 1230018 R 272560 CDS YP_107689.1 53718703 3094654 complement(1232050..1232232) 1 NC_006350.1 Similar to Acinetobacter calcoaceticus rubredoxin RubA SWALL:RUBR_ACICA (SWALL:P42453) (54 aa) fasta scores: E(): 4.1e-12, 55.76% id in 52 aa, and to Ralstonia solanacearum probable rubredoxin protein rsc0667 or rs01572 SWALL:Q8Y1M3 (EMBL:AL646060) (60 aa) fasta scores: E(): 3.6e-15, 55.93% id in 59 aa; rubredoxin 1232232 rubA 3094654 rubA Burkholderia pseudomallei K96243 rubredoxin YP_107689.1 1232050 R 272560 CDS YP_107690.1 53718704 3093117 1232690..1233145 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0315 SWALL:Q9I6H6 (EMBL:AE004469) (145 aa) fasta scores: E(): 2.8e-15, 48.85% id in 131 aa; hypothetical protein 1233145 3093117 BPSL1067 Burkholderia pseudomallei K96243 hypothetical protein YP_107690.1 1232690 D 272560 CDS YP_107691.1 53718705 3093263 1233313..1235259 1 NC_006350.1 Similar to Escherichia coli ABC transporter ATP-binding protein Uup or b0949 SWALL:UUP_ECOLI (SWALL:P43672) (635 aa) fasta scores: E(): 8.9e-80, 47.9% id in 643 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc0975 or rs04385 SWALL:Q8Y0R8 (EMBL:AL646062) (636 aa) fasta scores: E(): 3e-119, 70.74% id in 646 aa; ABC transporter ATP-binding protein 1235259 3093263 BPSL1068 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_107691.1 1233313 D 272560 CDS YP_107692.1 53718706 3093443 1235465..1237447 1 NC_006350.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1237447 parE 3093443 parE Burkholderia pseudomallei K96243 DNA topoisomerase IV subunit B YP_107692.1 1235465 D 272560 CDS YP_107693.1 53718707 3093260 1237506..1239824 1 NC_006350.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1239824 parC 3093260 parC Burkholderia pseudomallei K96243 DNA topoisomerase IV subunit A YP_107693.1 1237506 D 272560 CDS YP_107694.1 53718708 3093264 1240517..1240975 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1044 SWALL:Q9I4T0 (EMBL:AE004536) (154 aa) fasta scores: E(): 9.5e-16, 43.91% id in 148 aa; hypothetical protein 1240975 3093264 BPSL1071 Burkholderia pseudomallei K96243 hypothetical protein YP_107694.1 1240517 D 272560 CDS YP_107695.1 53718709 3093453 complement(1241121..1242005) 1 NC_006350.1 Similar to Pseudomonas aeruginosa transcriptional regulator PtxR or pa2258 SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 3.1e-10, 32.36% id in 275 aa, and to Ralstonia solanacearum transcription regulator protein rsp1514 or rs04791 SWALL:Q8XPX2 (EMBL:AL646085) (294 aa) fasta scores: E(): 2.1e-79, 73.72% id in 293 aa; LysR family transcriptional regulator 1242005 3093453 BPSL1072 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107695.1 1241121 R 272560 CDS YP_107696.1 53718710 3093454 1242099..1242566 1 NC_006350.1 Similar to, although longer in its N-terminal region than, Ralstonia solanacearum hypothetical transmembrane protein rsp1513 or rs04790 SWALL:Q8XPX3 (EMBL:AL646085) (145 aa) fasta scores: E(): 7.6e-33, 62.06% id in 145 aa, and to Pseudomonas aeruginosa hypothetical protein pa2880 SWALL:Q9HZW7 (EMBL:AE004714) (171 aa) fasta scores: E(): 6.1e-28, 53.42% id in 146 aa (although BPSL10073 is shorter in its N-terminal region); hypothetical protein 1242566 3093454 BPSL1073 Burkholderia pseudomallei K96243 hypothetical protein YP_107696.1 1242099 D 272560 CDS YP_107697.1 53718711 3091778 complement(1242775..1243737) 1 NC_006350.1 Similar to Rhizobium meliloti transcriptional regulator, LysR family protein rb0846 or smb21180 SWALL:Q92V68 (EMBL:AL603645) (317 aa) fasta scores: E(): 2.4e-35, 37.83% id in 296 aa, and to Escherichia coli cyn operon transcriptional activator CynR or b0338 SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 1.8e-12, 28.01% id in 282 aa. Note: This CDS is longer in its N-terminal region than the database matches; LysR family transcriptional regulator 1243737 3091778 BPSL1074 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107697.1 1242775 R 272560 CDS YP_107698.1 53718712 3091779 1243953..1245266 1 NC_006350.1 Similar to Escherichia coli shikimate transporter ShiA or b1981 SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 2.5e-54, 40% id in 420 aa, and to Pseudomonas aeruginosa probable MFS transporter pa3595 SWALL:Q9HY31 (EMBL:AE004780) (469 aa) fasta scores: E(): 1.6e-65, 46.24% id in 413 aa; transport system integral membrane protein 1245266 3091779 BPSL1075 Burkholderia pseudomallei K96243 transport system integral membrane protein YP_107698.1 1243953 D 272560 CDS YP_107699.1 53718713 3094800 1245268..1246530 1 NC_006350.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1246530 3094800 BPSL1076 Burkholderia pseudomallei K96243 allantoate amidohydrolase YP_107699.1 1245268 D 272560 CDS YP_107700.1 53718714 3094801 1246813..1247838 1 NC_006350.1 Similar to Rhizobium loti acetylpolyamine aminohydrolase mll0103 SWALL:Q98NK3 (EMBL:AP002994) (342 aa) fasta scores: E(): 3.1e-63, 48.67% id in 339 aa, and to Pseudomonas aeruginosa acetylpolyamine aminohydrolase pa1409 SWALL:Q9I3T5 (EMBL:AE004570) (346 aa) fasta scores: E(): 5.6e-47, 42.57% id in 350 aa; aminohydrolase 1247838 3094801 BPSL1078 Burkholderia pseudomallei K96243 aminohydrolase YP_107700.1 1246813 D 272560 CDS YP_107701.1 53718715 3093557 complement(1248218..1249411) 1 NC_006350.1 Similar to Alcaligenes eutrophus chromate transport protein ChrA SWALL:CHRA_ALCEU (SWALL:P17551) (401 aa) fasta scores: E(): 9.9e-12, 24.8% id in 387 aa, and to Bacillus halodurans chromate transporter bh0574 SWALL:Q9KFB1 (EMBL:AP001509) (397 aa) fasta scores: E(): 5.1e-19, 26.14% id in 394 aa; metal transport integral membrane protein 1249411 3093557 BPSL1079 Burkholderia pseudomallei K96243 metal transport integral membrane protein YP_107701.1 1248218 R 272560 CDS YP_107702.1 53718716 3093558 complement(1249558..1251918) 1 NC_006350.1 Similar in its C-terminal region to the C-terminal region of Ralstonia solanacearum hypothetical protein rsp1155 or rs05432 SWALL:Q8XQR6 (EMBL:AL646083) (915 aa) fasta scores: E(): 3.9e-66, 44.51% id in 447 aa, and similar in its full length to the C-terminal region of Pseudomonas aeruginosa hypothetical protein pa4601 SWALL:Q9HVI8 (EMBL:AE004874) (1415 aa) fasta scores: E(): 1.7e-59, 31.6% id in 753 aa; hypothetical protein 1251918 3093558 BPSL1080 Burkholderia pseudomallei K96243 hypothetical protein YP_107702.1 1249558 R 272560 CDS YP_107703.1 53718717 3094040 complement(1252138..1253037) 1 NC_006350.1 Similar to Erwinia chrysanthemi antibiotic biosynthesis protein Pab SWALL:Q93KB5 (EMBL:AJ310612) (293 aa) fasta scores: E(): 2.4e-43, 50.5% id in 295 aa, and to Xanthomonas axonopodis pv. citri str. 306 conserved hypothetical protein xac2912 SWALL:AAM37757 (EMBL:AE011933) (292 aa) fasta scores: E(): 1.3e-33, 45.39% id in 293 aa; phenazine biosynthesis-like protein 1253037 3094040 BPSL1081 Burkholderia pseudomallei K96243 phenazine biosynthesis-like protein YP_107703.1 1252138 R 272560 CDS YP_107704.1 53718718 3094041 complement(1253042..1253509) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0986 or rs04306 SWALL:Q8Y0Q7 (EMBL:AL646062) (156 aa) fasta scores: E(): 1.9e-40, 73.71% id in 156 aa, and to Mycobacterium leprae hypothetical protein ml2304 SWALL:Q9CB89 (EMBL:AL583925) (174 aa) fasta scores: E(): 3e-21, 50.66% id in 150 aa; hypothetical protein 1253509 3094041 BPSL1082 Burkholderia pseudomallei K96243 hypothetical protein YP_107704.1 1253042 R 272560 CDS YP_107705.1 53718719 3093516 complement(1253565..1254767) 1 NC_006350.1 Similar to Ralstonia solanacearum probable aminotransferase rsc0985 or rs04307 SWALL:Q8Y0Q8 (EMBL:AL646062) (406 aa) fasta scores: E(): 1.9e-100, 64.97% id in 394 aa, and to Xanthomonas axonopodis pv. citri str. 306 valine-pyruvate aminotransferase AvtA SWALL:AAM36720 (EMBL:AE011819) (427 aa) fasta scores: E(): 1e-95, 64.24% id in 386 aa; aminotransferase 1254767 3093516 BPSL1083 Burkholderia pseudomallei K96243 aminotransferase YP_107705.1 1253565 R 272560 CDS YP_107706.1 53718720 3093517 complement(1254807..1255715) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0987 or rs04305 SWALL:Q8Y0Q6 (EMBL:AL646062) (313 aa) fasta scores: E(): 3.2e-49, 53.69% id in 298 aa, and to Agrobacterium tumefaciens conserved hypothetical protein, membrane protein atu0234 or agr_c_394 SWALL:Q8UIQ9 (EMBL:AE008996) (291 aa) fasta scores: E(): 9.9e-38, 45.42% id in 295 aa; hypothetical protein 1255715 3093517 BPSL1084 Burkholderia pseudomallei K96243 hypothetical protein YP_107706.1 1254807 R 272560 CDS YP_107707.1 53718721 3094532 complement(1255816..1256499) 1 NC_006350.1 Similar to Deinococcus radiodurans hypothetical protein dr2014 SWALL:Q9RSV8 (EMBL:AE002038) (207 aa) fasta scores: E(): 1.6e-14, 48.4% id in 219 aa; hypothetical protein 1256499 3094532 BPSL1085 Burkholderia pseudomallei K96243 hypothetical protein YP_107707.1 1255816 R 272560 CDS YP_107708.1 53718722 3094533 1256635..1258104 1 NC_006350.1 Similar to Ralstonia solanacearum transcription regulator protein rsc0989 or rs04303 SWALL:Q8Y0Q4 (EMBL:AL646062) (490 aa) fasta scores: E(): 1.5e-129, 68.66% id in 485 aa, and to Brucella melitensis transcriptional regulator, GntR family / aminotransferase class-I bmei0169 SWALL:Q8YJB7 (EMBL:AE009459) (484 aa) fasta scores: E(): 2.9e-65, 43.75% id in 464 aa; GntR family transcriptional regulator 1258104 3094533 BPSL1086 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_107708.1 1256635 D 272560 CDS YP_107709.1 53718723 3091971 1258240..1260138 1 NC_006350.1 molecular chaperone; heat shock protein 90 1260138 htpG 3091971 htpG Burkholderia pseudomallei K96243 heat shock protein 90 YP_107709.1 1258240 D 272560 CDS YP_107710.1 53718724 3091588 1260147..1260740 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2780 or rs00067 SWALL:Q8XVQ0 (EMBL:AL646071) (176 aa) fasta scores: E(): 2.8e-10, 37.58% id in 157 aa, and to Pseudomonas aeruginosa hypothetical protein pa5357 SWALL:Q9HTK1 (EMBL:AE004947) (178 aa) fasta scores: E(): 3e-05, 34.8% id in 181 aa; hypothetical protein 1260740 3091588 BPSL1088 Burkholderia pseudomallei K96243 hypothetical protein YP_107710.1 1260147 D 272560 CDS YP_107711.1 53718725 3091589 1260737..1261216 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0991 or rs04301 SWALL:Q8Y0Q2 (EMBL:AL646062) (166 aa) fasta scores: E(): 7.6e-34, 60.51% id in 157 aa, and to Methanosarcina mazei Goe1 conserved protein mm1651 SWALL:AAM31347 (EMBL:AE013399) (158 aa) fasta scores: E(): 6.7e-25, 51.4% id in 142 aa; hypothetical protein 1261216 3091589 BPSL1089 Burkholderia pseudomallei K96243 hypothetical protein YP_107711.1 1260737 D 272560 CDS YP_107712.1 53718726 3093821 1261467..1262396 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0995 or rs04297 SWALL:Q8Y0P8 (EMBL:AL646062) (295 aa) fasta scores: E(): 7e-62, 58.36% id in 305 aa, and to Neisseria meningitidis transferase nma1087 or nmb0869 SWALL:Q9JQL8 (EMBL:AL162755) (263 aa) fasta scores: E(): 1.4e-21, 31.83% id in 245 aa; hypothetical protein 1262396 3093821 BPSL1091 Burkholderia pseudomallei K96243 hypothetical protein YP_107712.1 1261467 D 272560 CDS YP_107713.1 53718727 3093822 1262588..1262827 1 NC_006350.1 Similar to Thermoplasma volcanium hypothetical protein tv1324 or tvg1365320 SWALL:Q978U1 (EMBL:AP000996) (66 aa) fasta scores: E(): 3.5e-06, 46.15% id in 52 aa, and to Thermoplasma acidophilum hypothetical membrane protein ta0299 SWALL:Q9HLC9 (EMBL:AL445063) (86 aa) fasta scores: E(): 6.1e-06, 44.23% id in 52 aa; hypothetical protein 1262827 3093822 BPSL1092 Burkholderia pseudomallei K96243 hypothetical protein YP_107713.1 1262588 D 272560 CDS YP_107714.1 53718728 3093487 1262824..1264374 1 NC_006350.1 Similar to Streptomyces coelicolor permease sco5229 or Sc7E4.26c SWALL:Q9K494 (EMBL:AL359214) (532 aa) fasta scores: E(): 5.9e-102, 58.25% id in 527 aa, and to Sulfolobus solfataricus metabolite permease, sso2476 SWALL:Q97VX6 (EMBL:AE006846) (505 aa) fasta scores: E(): 1.9e-75, 45.11% id in 501 aa; hypothetical protein 1264374 3093487 BPSL1093 Burkholderia pseudomallei K96243 hypothetical protein YP_107714.1 1262824 D 272560 CDS YP_107715.1 53718729 3093488 complement(1264502..1264936) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0601 or rs03878 SWALL:Q8XS80 (EMBL:AL646079) (143 aa) fasta scores: E(): 2e-23, 52.38% id in 147 aa, and to Escherichia coli PhnB protein b4107 SWALL:PHNB_ECOLI (SWALL:P16681) (147 aa) fasta scores: E(): 6e-15, 39.16% id in 143 aa; hypothetical protein 1264936 3093488 BPSL1094 Burkholderia pseudomallei K96243 hypothetical protein YP_107715.1 1264502 R 272560 CDS YP_107716.1 53718730 3094101 complement(1265301..1266254) 1 NC_006350.1 Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 1266254 talB 3094101 talB Burkholderia pseudomallei K96243 transaldolase B YP_107716.1 1265301 R 272560 CDS YP_107717.1 53718731 3092612 complement(1266656..1267873) 1 NC_006350.1 Similar to, although longer in its N-terminal region than, Acinetobacter calcoaceticus benzoate membrane transport protein BenE SWALL:BENE_ACICA (SWALL:P07775) (394 aa) fasta scores: E(): 9.6e-57, 43.38% id in 378 aa, and to Pseudomonas putida BenE SWALL:Q9L7Y0 (EMBL:AF218267) (399 aa) fasta scores: E(): 6.5e-66, 48.83% id in 385 aa; transport related membrane protein 1267873 3092612 BPSL1096 Burkholderia pseudomallei K96243 transport related membrane protein YP_107717.1 1266656 R 272560 CDS YP_107718.1 53718732 3092613 complement(1267966..1269141) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0996 or rs04296 SWALL:Q8Y0P7 (EMBL:AL646062) (391 aa) fasta scores: E(): 1.1e-126, 78.57% id in 392 aa, and to Pseudomonas aeruginosa hypothetical protein pa2705 SWALL:Q9I0D7 (EMBL:AE004698) (393 aa) fasta scores: E(): 8.7e-96, 59.03% id in 393 aa; hypothetical protein 1269141 3092613 BPSL1097 Burkholderia pseudomallei K96243 hypothetical protein YP_107718.1 1267966 R 272560 CDS YP_107719.1 53718733 3091862 complement(1269354..1270196) 1 NC_006350.1 Similar to, although shorter in its N-terminal region than, Ralstonia solanacearum hypothetical protein rsc0998 or rs04294 SWALL:Q8Y0P5 (EMBL:AL646062) (290 aa) fasta scores: E(): 5.8e-87, 84.94% id in 279 aa, and to Pseudomonas aeruginosa hypothetical protein pa2707 SWALL:Q9I0D5 (EMBL:AE004698) (281 aa) fasta scores: E(): 3.6e-73, 71.84% id in 277 aa; hypothetical protein 1270196 3091862 BPSL1098 Burkholderia pseudomallei K96243 hypothetical protein YP_107719.1 1269354 R 272560 CDS YP_107720.1 53718734 3091863 1270430..1270789 1 NC_006350.1 Similar to Ralstonia solanacearum periplasmic cytochrome type-C oxidoreductase signal peptide protein rsc0999 or rs04293 SWALL:Q8Y0P4 (EMBL:AL646062) (115 aa) fasta scores: E(): 1.5e-21, 58.77% id in 114 aa, and to Marinobacter hydrocarbonoclasticus cytochrome C-552 SWALL:C552_MARHY (SWALL:P82903) (88 aa) fasta scores: E(): 2.1e-06, 41.11% id in 90 aa; cytochrome C -like protein 1270789 3091863 BPSL1099 Burkholderia pseudomallei K96243 cytochrome C -like protein YP_107720.1 1270430 D 272560 CDS YP_107721.1 53718735 3094148 1270830..1271198 1 NC_006350.1 Similar to Ralstonia solanacearum periplasmic cytochrome type-C oxidoreductase signal peptide protein rsc1000 or rs04292 SWALL:Q8Y0P3 (EMBL:AL646062) (133 aa) fasta scores: E(): 2.3e-12, 49.58% id in 121 aa, and to Marinobacter hydrocarbonoclasticus cytochrome C-552 SWALL:C552_MARHY (SWALL:P82903) (88 aa) fasta scores: E(): 3.7e-05, 38.63% id in 88 aa; cytochrome C -like protein 1271198 3094148 BPSL1100 Burkholderia pseudomallei K96243 cytochrome C -like protein YP_107721.1 1270830 D 272560 CDS YP_107722.1 53718736 3094149 complement(1271697..1272248) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1001 or rs04291 SWALL:Q8Y0P2 (EMBL:AL646062) (170 aa) fasta scores: E(): 1.1e-36, 63.12% id in 141 aa, and to Neisseria meningitidis hypothetical protein nma1720 SWALL:Q9JTL8 (EMBL:AL162756) (156 aa) fasta scores: E(): 2.9e-18, 43.57% id in 140 aa. Note: Similarity in both cases starts in residue no. 40; hypothetical protein 1272248 3094149 BPSL1101 Burkholderia pseudomallei K96243 hypothetical protein YP_107722.1 1271697 R 272560 CDS YP_107723.1 53718737 3091536 1272686..1273756 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1002 or rs04290 SWALL:Q8Y0P1 (EMBL:AL646062) (312 aa) fasta scores: E(): 8.7e-50, 57.6% id in 309 aa, and to Aeropyrum pernix hypothetical protein ape0076 SWALL:Q9YG25 (EMBL:AP000058) (296 aa) fasta scores: E(): 8.3e-14, 34.23% id in 295 aa; hypothetical protein 1273756 3091536 BPSL1102 Burkholderia pseudomallei K96243 hypothetical protein YP_107723.1 1272686 D 272560 CDS YP_107724.1 53718738 3093395 complement(1273889..1274533) 1 NC_006350.1 Similar to Escherichia coli endonuclease III Nth or b1633 SWALL:END3_ECOLI (SWALL:P20625) (211 aa) fasta scores: E(): 7.6e-52, 68.26% id in 208 aa, and to Ralstonia solanacearum probable endonuclease III protein rsc1005 or rs04287 SWALL:Q8Y0N8 (EMBL:AL646062) (214 aa) fasta scores: E(): 1.9e-64, 78.77% id in 212 aa; endonuclease III 1274533 nth 3093395 nth Burkholderia pseudomallei K96243 endonuclease III YP_107724.1 1273889 R 272560 CDS YP_107725.1 53718739 3091537 complement(1274538..1275410) 1 NC_006350.1 Involved in the electron transport chain; ferredoxin 1275410 3091537 BPSL1104 Burkholderia pseudomallei K96243 ferredoxin YP_107725.1 1274538 R 272560 CDS YP_107726.1 53718740 3093813 1275668..1276300 1 NC_006350.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsc1007 or rs04285 SWALL:Q8Y0N6 (EMBL:AL646062) (239 aa) fasta scores: E(): 1.6e-45, 54.9% id in 204 aa, and to Agrobacterium tumefaciens transcriptional regulator, TetR family atu3115 or agr_l_1690gM SWALL:Q8UBA1 (EMBL:AE009242) (232 aa) fasta scores: E(): 8.1e-30, 48.12% id in 187 aa; TetR family regulatory protein 1276300 3093813 BPSL1105 Burkholderia pseudomallei K96243 TetR family regulatory protein YP_107726.1 1275668 D 272560 CDS YP_107727.1 53718741 3093814 complement(1276435..1277901) 1 NC_006350.1 N-terminal region similar to Alcaligenes eutrophus intracellular PHB depolymerase PhaZRE SWALL:O87189 (EMBL:AB017612) (419 aa) fasta scores: E(): 3.9e-118, 77.91% id in 412 aa, and to Ralstonia solanacearum probable poly[D(-)-3-hydroxybutyrate] depolymerase PhaZ or rsc1008 or rs04284 SWALL:Q8Y0N5 (EMBL:AL646062) (422 aa) fasta scores: E(): 3.7e-119, 76.73% id in 417 aa, and C-terminal region similar to Trypanosoma cruzi histone h1.c8/h1.m1 SWALL:H1C8_TRYCR (SWALL:P40270) (74 aa) fasta scores: E(): 2.8, 44.06% id in 59 aa; depolymerase/histone-like protein 1277901 3093814 BPSL1106 Burkholderia pseudomallei K96243 depolymerase/histone-like protein YP_107727.1 1276435 R 272560 CDS YP_107728.1 53718742 3091503 complement(1278121..1279953) 1 NC_006350.1 Similar to Streptomyces coelicolor hypothetical protein sco1830 or sci8.15 SWALL:Q9RJ38 (EMBL:AL132644) (595 aa) fasta scores: E(): 6e-137, 57.52% id in 598 aa, and to Ralstonia solanacearum hypothetical protein rsc1458 or rs03849 SWALL:Q8XZE3 (EMBL:AL646064) (619 aa) fasta scores: E(): 1.4e-118, 62% id in 608 aa; hypothetical protein 1279953 3091503 BPSL1107 Burkholderia pseudomallei K96243 hypothetical protein YP_107728.1 1278121 R 272560 CDS YP_107729.1 53718743 3091504 1280130..1281365 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4204 SWALL:Q9HWH7 (EMBL:AE004837) (388 aa) fasta scores: E(): 1.8e-55, 46.01% id in 389 aa, and to Ralstonia solanacearum hemagglutinin-related protein rsp0183 or rs04695 SWALL:Q8XTD0 (EMBL:AL646077) (410 aa) fasta scores: E(): 1.2e-33, 35.28% id in 411 aa; hypothetical protein 1281365 3091504 BPSL1108 Burkholderia pseudomallei K96243 hypothetical protein YP_107729.1 1280130 D 272560 CDS YP_107730.1 53718744 3093823 complement(1281716..1287241) 1 NC_006350.1 C-terminal region similar to Escherichia coli cell division protein FtsK or b0890 SWALL:FTSK_ECOLI (SWALL:P46889) (1329 aa) fasta scores: E(): 3.4e-64, 39.91% id in 1125 aa, and N-terminal region to Streptococcus pneumoniae cell wall surface anchor family protein sp1772 SWALL:Q97P71 (EMBL:AE007470) (4776 aa) fasta scores: E(): 3.1e-25, 26.32% id in 1189 aa. Note: Also contains a repeat region (7x TSAET(A/V)AP(D/N)(D/G/S)H(A/V)(P/S)); hypothetical protein 1287241 3093823 BPSL1109 Burkholderia pseudomallei K96243 hypothetical protein YP_107730.1 1281716 R 272560 CDS YP_107731.1 53718745 3093824 complement(1287413..1287934) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0694 or rs01599 SWALL:Q8Y1J6 (EMBL:AL646060) (246 aa) fasta scores: E(): 1.6e-07, 32.12% id in 165 aa, and to Deinococcus radiodurans hypothetical protein dr1940 SWALL:Q9RT29 (EMBL:AE002033) (403 aa) fasta scores: E(): 1.7e-05, 33.55% id in 152 aa; lipoprotein 1287934 3093824 BPSL1110 Burkholderia pseudomallei K96243 lipoprotein YP_107731.1 1287413 R 272560 CDS YP_107732.1 53718746 3092966 1288695..1289909 1 NC_006350.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 1289909 purT 3092966 purT Burkholderia pseudomallei K96243 phosphoribosylglycinamide formyltransferase 2 YP_107732.1 1288695 D 272560 CDS YP_107733.1 53718747 3092291 1290012..1290233 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein rsp0401 or rs00829 SWALL:Q8XSR6 (EMBL:AL646078) (55 aa) fasta scores: E(): 7.9e-11, 75.51% id in 49 aa; lipoprotein 1290233 3092291 BPSL1112 Burkholderia pseudomallei K96243 lipoprotein YP_107733.1 1290012 D 272560 CDS YP_107734.1 53718748 3092292 1290292..1290678 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc2496 rsc2496 or rs01100 SWALL:Q8XWH8 (EMBL:AL646070) (151 aa) fasta scores: E(): 2.2e-07, 41.57% id in 89 aa, and to Brucella melitensis hypothetical protein bmei1494 SWALL:Q8YFM6 (EMBL:AE009586) (113 aa) fasta scores: E(): 8.3e-07, 32.75% id in 116 aa; hypothetical protein 1290678 3092292 BPSL1113 Burkholderia pseudomallei K96243 hypothetical protein YP_107734.1 1290292 D 272560 CDS YP_107735.1 53718749 3092874 1291364..1292812 1 NC_006350.1 Similar to Escherichia coli ATP-dependent RNA helicase RhlE or b0797 SWALL:RHLE_ECOLI (SWALL:P25888) (454 aa) fasta scores: E(): 3e-74, 52.16% id in 462 aa, and to Ralstonia solanacearum probable ATP-dependent RNA helicase rsc2211 or rs01388 SWALL:Q8XXA5 (EMBL:AL646068) (495 aa) fasta scores: E(): 4.1e-102, 65.59% id in 497 aa; ATP-dependent RNA helicase 2 1292812 rhlE2 3092874 rhlE2 Burkholderia pseudomallei K96243 ATP-dependent RNA helicase 2 YP_107735.1 1291364 D 272560 CDS YP_107736.1 53718750 3092536 complement(1293310..1294203) 1 NC_006350.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 1294203 3092536 BPSL1115 Burkholderia pseudomallei K96243 glutamyl-Q tRNA(Asp) synthetase YP_107736.1 1293310 R 272560 CDS YP_107737.1 53718751 3092537 complement(1294247..1295146) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2206 or rs01393 SWALL:Q8XXB0 (EMBL:AL646068) (282 aa) fasta scores: E(): 5.6e-65, 63.53% id in 277 aa, and to Rhizobium loti hypothetical protein mll2992 SWALL:YT92_RHILO (SWALL:Q98H78) (309 aa) fasta scores: E(): 8.2e-27, 43.79% id in 274 aa; rhodanese superfamily protein 1295146 3092537 BPSL1116 Burkholderia pseudomallei K96243 rhodanese superfamily protein YP_107737.1 1294247 R 272560 CDS YP_107738.1 53718752 3093623 1295759..1299283 1 NC_006350.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1299283 dnaE 3093623 dnaE Burkholderia pseudomallei K96243 DNA polymerase III subunit alpha YP_107738.1 1295759 D 272560 CDS YP_107739.1 53718753 3091747 1299323..1301113 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 probable transport ATP-binding protein MsbA or b0914 or z1260 or ecs0997 SWALL:MSBA_ECOLI (SWALL:P27299) (582 aa) fasta scores: E(): 4.9e-78, 42.05% id in 573 aa, and to Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc2200 or rs01399 SWALL:Q8XXB6 (EMBL:AL646068) (592 aa) fasta scores: E(): 1e-124, 65.23% id in 581 aa; ABC transporter ATP-binding protein 1301113 3091747 BPSL1118 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_107739.1 1299323 D 272560 CDS YP_107740.1 53718754 3091748 1301167..1302249 1 NC_006350.1 Similar to Neisseria meningitidis LgtG SWALL:AAM33532 (EMBL:AF470675) (351 aa) fasta scores: E(): 2.6e-49, 40.57% id in 350 aa, and to Neisseria gonorrhoeae lipooligosaccharide glycosyl transferase G LgtG SWALL:O85795 (EMBL:AF076919) (351 aa) fasta scores: E(): 1.4e-48, 40.28% id in 350 aa; LPS biosynthesis-like protein 1302249 3091748 BPSL1119 Burkholderia pseudomallei K96243 LPS biosynthesis-like protein YP_107740.1 1301167 D 272560 CDS YP_107741.1 53718755 3092407 1302531..1303676 1 NC_006350.1 Similar to Streptomyces coelicolor transferase sco6183 or sc2g5.04 SWALL:Q9Z5B9 (EMBL:AL035478) (335 aa) fasta scores: E(): 6.7e-12, 31.41% id in 312 aa, and to Pseudomonas aeruginosa heptosyl transferase I RfaC SWALL:O05195 (EMBL:U70982) (355 aa) fasta scores: E(): 2.8e-10, 28.87% id in 374 aa; transferase 1303676 3092407 BPSL1120 Burkholderia pseudomallei K96243 transferase YP_107741.1 1302531 D 272560 CDS YP_107742.1 53718756 3092408 1303673..1304971 1 NC_006350.1 Similar to Anabaena sp. hypothetical protein all5073 SWALL:Q8YM67 (EMBL:AP003598) (475 aa) fasta scores: E(): 7.4e-05, 22.01% id in 418 aa; hypothetical protein 1304971 3092408 BPSL1121 Burkholderia pseudomallei K96243 hypothetical protein YP_107742.1 1303673 D 272560 CDS YP_107743.1 53718757 3094541 1304968..1306230 1 NC_006350.1 Similar to Bacillus halodurans lipopolysaccharide biosynthesis bh3663 SWALL:Q9K6R4 (EMBL:AP001519) (373 aa) fasta scores: E(): 8.7e-19, 29.17% id in 401 aa, and to Fusobacterium nucleatum glycosyl transferase fn1245 SWALL:Q8R631 (EMBL:AE010630) (381 aa) fasta scores: E(): 2.6e-17, 27.19% id in 364 aa; glycosyl transferase 1306230 3094541 BPSL1122 Burkholderia pseudomallei K96243 glycosyl transferase YP_107743.1 1304968 D 272560 CDS YP_107744.1 53718758 3094542 1306305..1307489 1 NC_006350.1 Similar to Escherichia coli lipopolysaccharide core biosynthesis glycosyl transferase RfaQ or WaaQ or b3632 SWALL:RFAQ_ECOLI (SWALL:P25742) (344 aa) fasta scores: E(): 1.8e-16, 26.62% id in 323 aa, and to Yersinia pestis lipopolysaccharide core biosynthesis protein ypo0416 SWALL:Q8ZIS3 (EMBL:AJ414142) (346 aa) fasta scores: E(): 5.2e-21, 32.66% id in 300 aa; LPS core biosynthesis-like protein 1307489 3094542 BPSL1123 Burkholderia pseudomallei K96243 LPS core biosynthesis-like protein YP_107744.1 1306305 D 272560 CDS YP_107745.1 53718759 3093370 complement(1307464..1307730) 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 1307730 3093370 BPSL1123b Burkholderia pseudomallei K96243 hypothetical protein YP_107745.1 1307464 R 272560 CDS YP_107746.1 53718760 3093371 complement(1307754..1308518) 1 NC_006350.1 Similar to Serratia marcescens lipopolysaccharide core biosynthesis glycosyl transferase KdtX SWALL:KDTX_SERMA (SWALL:Q54435) (257 aa) fasta scores: E(): 1.8e-33, 41.66% id in 252 aa, and to Ralstonia solanacearum probable glycosyl transferase rsc2202 or rs01397 SWALL:Q8XXB4 (EMBL:AL646068) (256 aa) fasta scores: E(): 1.2e-41, 50.59% id in 251 aa; LPS biosynthesis-like protein 1308518 3093371 BPSL1124 Burkholderia pseudomallei K96243 LPS biosynthesis-like protein YP_107746.1 1307754 R 272560 CDS YP_107747.1 53718761 3093885 1308976..1309356 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0815 or rs05007 SWALL:Q8Y175 (EMBL:AL646061) (132 aa) fasta scores: E(): 1.5e-17, 47.72% id in 132 aa, and to Rhizobium meliloti hypothetical transmembrane signal peptide protein r01916 or smc04246 SWALL:Q92K77 (EMBL:AL591788) (126 aa) fasta scores: E(): 1.1e-05, 36.66% id in 120 aa; hypothetical protein 1309356 3093885 BPSL1125 Burkholderia pseudomallei K96243 hypothetical protein YP_107747.1 1308976 D 272560 CDS YP_107748.1 53718762 3093886 complement(1309637..1310230) 1 NC_006350.1 hypothetical protein 1310230 3093886 BPSL1126 Burkholderia pseudomallei K96243 hypothetical protein YP_107748.1 1309637 R 272560 CDS YP_107749.1 53718763 3093795 complement(1310507..1311775) 1 NC_006350.1 Similar to Mycobacterium tuberculosis transmembrane transport protein rv2456c or mtv008.12c or mt2531 SWALL:O53183 (EMBL:AL021246) (418 aa) fasta scores: E(): 6.3e-41, 36.74% id in 411 aa, and to Xanthomonas axonopodis pv. citri str. 306 MFS transporter xac0229 SWALL:AAM35121 (EMBL:AE011647) (409 aa) fasta scores: E(): 2.4e-34, 36.13% id in 393 aa; ABC transporter integral membrane protein 1311775 3093795 BPSL1127 Burkholderia pseudomallei K96243 ABC transporter integral membrane protein YP_107749.1 1310507 R 272560 CDS YP_107750.1 53718764 3093796 complement(1311772..1312755) 1 NC_006350.1 lipoprotein 1312755 3093796 BPSL1128 Burkholderia pseudomallei K96243 lipoprotein YP_107750.1 1311772 R 272560 CDS YP_107751.1 53718765 3091501 complement(1313442..1313894) 1 NC_006350.1 Similar to Escherichia coli O157:H7 hypothetical protein z3974 or ecs3535 SWALL:Q8X921 (EMBL:AE005496) (143 aa) fasta scores: E(): 6.1e-23, 48.55% id in 138 aa, and to Pseudomonas aeruginosa hypothetical protein a0269 SWALL:Q9I6M1 (EMBL:AE004465) (145 aa) fasta scores: E(): 4.8e-21, 44.44% id in 135 aa; hypothetical protein 1313894 3091501 BPSL1129 Burkholderia pseudomallei K96243 hypothetical protein YP_107751.1 1313442 R 272560 CDS YP_107752.1 53718766 3091502 complement(1314397..1315290) 1 NC_006350.1 Similar to Caulobacter crescentus RNA polymerase sigma factor cc3266 SWALL:Q9A3D8 (EMBL:AE005990) (291 aa) fasta scores: E(): 9.8e-42, 44.84% id in 281 aa, and to Streptomyces coelicolor RNA polymerase sigma factor sco1263 or 2scg18.10C SWALL:Q9K3H7 (EMBL:AL390188) (295 aa) fasta scores: E(): 1.5e-41, 45.93% id in 283 aa; sigma factor 1315290 3091502 BPSL1130 Burkholderia pseudomallei K96243 sigma factor YP_107752.1 1314397 R 272560 CDS YP_107753.1 53718767 3094623 complement(1316037..1316330) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2198 or rs01401 SWALL:Q8XXB8 (EMBL:AL646068) (96 aa) fasta scores: E(): 1.5e-25, 68.04% id in 97 aa; hypothetical protein 1316330 3094623 BPSL1132 Burkholderia pseudomallei K96243 hypothetical protein YP_107753.1 1316037 R 272560 CDS YP_107754.1 53718768 3093356 1317018..1317371 1 NC_006350.1 hypothetical protein 1317371 3093356 BPSL1133 Burkholderia pseudomallei K96243 hypothetical protein YP_107754.1 1317018 D 272560 CDS YP_107755.1 53718769 3093357 1318558..1319238 1 NC_006350.1 hypothetical protein 1319238 3093357 BPSL1134 Burkholderia pseudomallei K96243 hypothetical protein YP_107755.1 1318558 D 272560 CDS YP_107756.1 53718770 3092970 1319300..1320697 1 NC_006350.1 hypothetical protein 1320697 3092970 BPSL1135 Burkholderia pseudomallei K96243 hypothetical protein YP_107756.1 1319300 D 272560 CDS YP_107757.1 53718771 3092971 complement(1320725..1322113) 1 NC_006350.1 Similar to Bacillus subtilis uric acid permease PucJ SWALL:PUCJ_BACSU (SWALL:O32139) (449 aa) fasta scores: E(): 2.7e-34, 37.02% id in 424 aa, and to Pseudomonas aeruginosa probable transporter pa0352 SWALL:Q9I6E1 (EMBL:AE004473) (461 aa) fasta scores: E(): 1.1e-134, 82.65% id in 444 aa; hypothetical protein 1322113 3092971 BPSL1136 Burkholderia pseudomallei K96243 hypothetical protein YP_107757.1 1320725 R 272560 CDS YP_107758.1 53718772 3094871 1322871..1323962 1 NC_006350.1 Very low similarity to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related regulatory protein cII SWALL:AAM43407 (EMBL:AE012545) (339 aa) fasta scores: E(): 7.8e-10, 28.01% id in 332 aa; hypothetical protein 1323962 3094871 BPSL1137 Burkholderia pseudomallei K96243 hypothetical protein YP_107758.1 1322871 D 272560 CDS YP_107759.1 53718773 3094872 1323959..1324657 1 NC_006350.1 Very low similarity to the C-terminal regions of Clostridium perfringens hypothetical protein cpe1605 SWALL:Q8XJZ8 (EMBL:AP003191) (269 aa) fasta scores: E(): 1.6e-15, 32.86% id in 216 aa, and of Bacillus anthracis pxo1-131 SWALL:Q9X388 (EMBL:AF065404) (349 aa) fasta scores: E(): 6.8e-13, 32.67% id in 202 aa; hypothetical protein 1324657 3094872 BPSL1138 Burkholderia pseudomallei K96243 hypothetical protein YP_107759.1 1323959 D 272560 CDS YP_107760.1 53718774 3094458 complement(1325353..1325670) 1 NC_006350.1 hypothetical protein 1325670 3094458 BPSL1139 Burkholderia pseudomallei K96243 hypothetical protein YP_107760.1 1325353 R 272560 CDS YP_107761.1 53718775 3094459 complement(1325660..1326949) 1 NC_006350.1 Similar to Escherichia coli O157:H7 portal protein for prophage cp-933v z3328 SWALL:Q8X3L1 (EMBL:AE005441) (861 aa) fasta scores: E(): 1.2e-60, 43.4% id in 417 aa, and to Bacteriophage phiE125 gp4 4 SWALL:Q8W6U7 (EMBL:AF447491) (419 aa) fasta scores: E(): 1.5e-19, 27.34% id in 384 aa; phage-like protein 1326949 3094459 BPSL1140 Burkholderia pseudomallei K96243 phage-like protein YP_107761.1 1325660 R 272560 CDS YP_107762.1 53718776 3093890 complement(1326949..1327128) 1 NC_006350.1 hypothetical protein 1327128 3093890 BPSL1141 Burkholderia pseudomallei K96243 hypothetical protein YP_107762.1 1326949 R 272560 CDS YP_107763.1 53718777 3093891 complement(1327141..1329036) 1 NC_006350.1 Similar to Escherichia coli O157:H7 hypothetical protein z1804 SWALL:Q8X3S4 (EMBL:AE005324) (645 aa) fasta scores: E(): 3.9e-63, 42.81% id in 647 aa, and to Bacteriophage phiE125 gp6 6 SWALL:Q8W6U5 (EMBL:AF447491) (435 aa) fasta scores: E(): 3.9e-15, 27.29% id in 447 aa; phage-like protein 1329036 3093891 BPSL1142 Burkholderia pseudomallei K96243 phage-like protein YP_107763.1 1327141 R 272560 CDS YP_107764.1 53718778 3093495 complement(1329087..1330607) 1 NC_006350.1 Similar to Bacteriophage HK97 terminase large subunit 2 SWALL:Q9MCT1 (EMBL:AF069529) (504 aa) fasta scores: E(): 3.5e-82, 46.76% id in 494 aa, and to Escherichia coli O157:H7 terminase large subunit ecs1598 SWALL:Q8X2A3 (EMBL:AP002555) (553 aa) fasta scores: E(): 1e-27, 29.3% id in 488 aa; phage terminase 1330607 3093495 BPSL1143 Burkholderia pseudomallei K96243 phage terminase YP_107764.1 1329087 R 272560 CDS YP_107765.1 53718779 3093496 complement(1330589..1331029) 1 NC_006350.1 hypothetical protein 1331029 3093496 BPSL1144 Burkholderia pseudomallei K96243 hypothetical protein YP_107765.1 1330589 R 272560 CDS YP_107766.1 53718780 3093546 complement(1331134..1331427) 1 NC_006350.1 Similar to Bacteriophage P27 hypothetical 13.0 kDa protein SWALL:Q8W633 (EMBL:AJ298298) (116 aa) fasta scores: E(): 4.5e-10, 53.52% id in 71 aa, and to Haemophilus influenzae phage phi-105 holin-like protein SWALL:Q9L8N1 (EMBL:AF198256) (128 aa) fasta scores: E(): 6.5e-07, 36.17% id in 94 aa; phage-like protein 1331427 3093546 BPSL1145 Burkholderia pseudomallei K96243 phage-like protein YP_107766.1 1331134 R 272560 CDS YP_107767.1 53718781 3093547 complement(1332197..1332745) 1 NC_006350.1 hypothetical protein 1332745 3093547 BPSL1146 Burkholderia pseudomallei K96243 hypothetical protein YP_107767.1 1332197 R 272560 CDS YP_107768.1 53718782 3093719 complement(1332745..1332972) 1 NC_006350.1 hypothetical protein 1332972 3093719 BPSL1147 Burkholderia pseudomallei K96243 hypothetical protein YP_107768.1 1332745 R 272560 CDS YP_107769.1 53718783 3093720 complement(1332969..1333262) 1 NC_006350.1 hypothetical protein 1333262 3093720 BPSL1148 Burkholderia pseudomallei K96243 hypothetical protein YP_107769.1 1332969 R 272560 CDS YP_107770.1 53718784 3094769 complement(1333198..1333476) 1 NC_006350.1 hypothetical protein 1333476 3094769 BPSL1149 Burkholderia pseudomallei K96243 hypothetical protein YP_107770.1 1333198 R 272560 CDS YP_107771.1 53718785 3094770 complement(1333469..1333720) 1 NC_006350.1 hypothetical protein 1333720 3094770 BPSL1150 Burkholderia pseudomallei K96243 hypothetical protein YP_107771.1 1333469 R 272560 CDS YP_107772.1 53718786 3094745 complement(1333713..1333895) 1 NC_006350.1 Very low similarity in the C-terminal region to Ralstonia solanacearum hypothetical protein rsc2485 or rs01110 SWALL:Q8XWI9 (EMBL:AL646070) (106 aa) fasta scores: E(): 7, 36.5% id in 63 aa; hypothetical protein 1333895 3094745 BPSL1151 Burkholderia pseudomallei K96243 hypothetical protein YP_107772.1 1333713 R 272560 CDS YP_107773.1 53718787 3094746 complement(1333892..1334116) 1 NC_006350.1 hypothetical protein 1334116 3094746 BPSL1152 Burkholderia pseudomallei K96243 hypothetical protein YP_107773.1 1333892 R 272560 CDS YP_107774.1 53718788 3092503 complement(1334094..1334297) 1 NC_006350.1 hypothetical protein 1334297 3092503 BPSL1153 Burkholderia pseudomallei K96243 hypothetical protein YP_107774.1 1334094 R 272560 CDS YP_107775.1 53718789 3092504 complement(1334456..1334761) 1 NC_006350.1 hypothetical protein 1334761 3092504 BPSL1153A Burkholderia pseudomallei K96243 hypothetical protein YP_107775.1 1334456 R 272560 CDS YP_107776.1 53718790 3093157 complement(1334758..1335144) 1 NC_006350.1 hypothetical protein 1335144 3093157 BPSL1154 Burkholderia pseudomallei K96243 hypothetical protein YP_107776.1 1334758 R 272560 CDS YP_107777.1 53718791 3093158 complement(1335125..1335355) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2487 or rs05745 SWALL:Q8XWI7 (EMBL:AL646070) (68 aa) fasta scores: E(): 3.4e-13, 60.6% id in 66 aa; hypothetical protein 1335355 3093158 BPSL1155 Burkholderia pseudomallei K96243 hypothetical protein YP_107777.1 1335125 R 272560 CDS YP_107778.1 53718792 3094593 complement(1335523..1335978) 1 NC_006350.1 hypothetical protein 1335978 3094593 BPSL1156 Burkholderia pseudomallei K96243 hypothetical protein YP_107778.1 1335523 R 272560 CDS YP_107779.1 53718793 3094594 complement(1336223..1337464) 1 NC_006350.1 Similar to Xanthomonas axonopodis pv. citri str. 306 phage-related integrase IntS SWALL:AAM37139 (EMBL:AE011866) (408 aa) fasta scores: E(): 1.4e-17, 27.46% id in 426 aa, and to Bacteriophage phi-80 Integrase Int SWALL:VINT_BPPH8 (SWALL:P06155) (402 aa) fasta scores: E(): 1.6e-15, 23.07% id in 403 aa; phage integrase 1337464 3094594 BPSL1157 Burkholderia pseudomallei K96243 phage integrase YP_107779.1 1336223 R 272560 CDS YP_107780.1 53718794 3091771 complement(1337638..1339104) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ribonuclease G CafA or Rng or b3247 or z4605 or ecs4119 SWALL:RNG_ECOLI (SWALL:P25537) (488 aa) fasta scores: E(): 7.6e-103, 56.21% id in 491 aa, and to Ralstonia solanacearum probable ribonuclease G rsc2197 or rs01402 SWALL:Q8XXB9 (EMBL:AL646068) (489 aa) fasta scores: E(): 4.7e-152, 81.83% id in 490 aa; ribonuclease G 1339104 cafA 3091771 cafA Burkholderia pseudomallei K96243 ribonuclease G YP_107780.1 1337638 R 272560 CDS YP_107781.1 53718795 3093041 complement(1339113..1339742) 1 NC_006350.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1339742 maf 3093041 maf Burkholderia pseudomallei K96243 Maf-like protein YP_107781.1 1339113 R 272560 CDS YP_107782.1 53718796 3093042 complement(1339795..1340265) 1 NC_006350.1 SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 1340265 3093042 BPSL1160 Burkholderia pseudomallei K96243 rRNA large subunit methyltransferase YP_107782.1 1339795 R 272560 CDS YP_107783.1 53718797 3093049 complement(1340322..1340786) 1 NC_006350.1 Similar to, although shorter in its C-terminal region than, Ralstonia solanacearum hypothetical protein rsc2194 or rs01405 SWALL:Q8XXC1 (EMBL:AL646068) (203 aa) fasta scores: E(): 6.6e-39, 72.43% id in 156 aa, and to, although longer in its C-terminal region than, Escherichia coli hypothetical protein YbeB or b0637 SWALL:YBEB_ECOLI (SWALL:P05848) (105 aa) fasta scores: E(): 1.1e-09, 33.65% id in 104 aa; hypothetical protein 1340786 3093049 BPSL1161 Burkholderia pseudomallei K96243 hypothetical protein YP_107783.1 1340322 R 272560 CDS YP_107784.1 53718798 3093050 complement(1340791..1341543) 1 NC_006350.1 catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP; nicotinic acid mononucleotide adenylyltransferase 1341543 3093050 BPSL1162 Burkholderia pseudomallei K96243 nicotinic acid mononucleotide adenylyltransferase YP_107784.1 1340791 R 272560 CDS YP_107785.1 53718799 3092344 complement(1341540..1342463) 1 NC_006350.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1342463 hemF 3092344 hemF Burkholderia pseudomallei K96243 coproporphyrinogen III oxidase YP_107785.1 1341540 R 272560 CDS YP_107786.1 53718800 3094818 complement(1342594..1343871) 1 NC_006350.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1343871 purD 3094818 purD Burkholderia pseudomallei K96243 phosphoribosylamine--glycine ligase YP_107786.1 1342594 R 272560 CDS YP_107787.1 53718801 3093513 complement(1343982..1344710) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2190 or rs01409 SWALL:Q8XXC5 (EMBL:AL646068) (241 aa) fasta scores: E(): 3.5e-75, 84.64% id in 241 aa, and to Escherichia coli protein YebC or b1864 SWALL:YEBC_ECOLI (SWALL:P24237) (246 aa) fasta scores: E(): 7.5e-53, 61.57% id in 242 aa; hypothetical protein 1344710 3093513 BPSL1165 Burkholderia pseudomallei K96243 hypothetical protein YP_107787.1 1343982 R 272560 CDS YP_107788.1 53718802 3091557 complement(1345220..1345870) 1 NC_006350.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1345870 upp 3091557 upp Burkholderia pseudomallei K96243 uracil phosphoribosyltransferase YP_107788.1 1345220 R 272560 CDS YP_107789.1 53718803 3093514 1346128..1346907 1 NC_006350.1 Similar to Xanthomonas axonopodis pv. citri str. 306 oxidoreductase xac0384 SWALL:AAM35276 (EMBL:AE011664) (260 aa) fasta scores: E(): 1.7e-66, 71.53% id in 260 aa, and to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase rsc2186 or rs01413 SWALL:Q8XXC9 (EMBL:AL646068) (263 aa) fasta scores: E(): 3e-61, 67.3% id in 263 aa; dehydrogenase 1346907 3093514 BPSL1167 Burkholderia pseudomallei K96243 dehydrogenase YP_107789.1 1346128 D 272560 CDS YP_107790.1 53718804 3091721 1347137..1347529 1 NC_006350.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1347529 mgsA 3091721 mgsA Burkholderia pseudomallei K96243 methylglyoxal synthase YP_107790.1 1347137 D 272560 CDS YP_107791.1 53718805 3092044 1348381..1349355 1 NC_006350.1 Similar to Escherichia coli quinone oxidoreductase Qor or Hcz or b4051 SWALL:QOR_ECOLI (SWALL:P28304) (327 aa) fasta scores: E(): 1.6e-53, 47.7% id in 327 aa, and to Ralstonia solanacearum probable NADPH:quinone reductase, zeta-crystallin homolog oxidoreductase rsc2184 or rs01415 SWALL:Q8XXD1 (EMBL:AL646068) (324 aa) fasta scores: E(): 7.2e-86, 70.67% id in 324 aa; quinone oxidoreductase 1349355 qor 3092044 qor Burkholderia pseudomallei K96243 quinone oxidoreductase YP_107791.1 1348381 D 272560 CDS YP_107792.1 53718806 3093535 1349820..1349912 1 NC_006350.1 Similar to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc0701 SWALL:AAM40017 (EMBL:AE012169) (30 aa) fasta scores: E(): 0.11, 44.44% id in 27 aa, and to Escherichia coli protein KdpF or b0698.1 SWALL:KDPF_ECOLI (SWALL:P36937) (29 aa) fasta scores: E(): 4.4, 73.33% id in 15 aa; hypothetical protein 1349912 3093535 BPSL1170 Burkholderia pseudomallei K96243 hypothetical protein YP_107792.1 1349820 D 272560 CDS YP_107793.1 53718807 3091706 1349909..1351717 1 NC_006350.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 1351717 kdpA 3091706 kdpA Burkholderia pseudomallei K96243 potassium-transporting ATPase subunit A YP_107793.1 1349909 D 272560 CDS YP_107794.1 53718808 3092345 1351813..1353873 1 NC_006350.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 1353873 kdpB 3092345 kdpB Burkholderia pseudomallei K96243 potassium-transporting ATPase subunit B YP_107794.1 1351813 D 272560 CDS YP_107795.1 53718809 3092346 1353886..1354467 1 NC_006350.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 1354467 kdpC 3092346 kdpC Burkholderia pseudomallei K96243 potassium-transporting ATPase subunit C YP_107795.1 1353886 D 272560 CDS YP_107796.1 53718810 3094181 1354752..1357733 1 NC_006350.1 Similar to Escherichia coli sensor protein KdpD or b0695 SWALL:KDPD_ECOLI (SWALL:P21865) (894 aa) fasta scores: E(): 8.8e-93, 49.39% id in 913 aa, and to Salmonella typhi sensor protein sty0744 SWALL:Q8Z8E7 (EMBL:AL627267) (902 aa) fasta scores: E(): 3.5e-97, 48.91% id in 924 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; two-component system, sensor kinase KdpD 1357733 kdpD 3094181 kdpD Burkholderia pseudomallei K96243 two-component system, sensor kinase KdpD YP_107796.1 1354752 D 272560 CDS YP_107797.1 53718811 3094182 1357726..1358424 1 NC_006350.1 Similar to Escherichia coli kdp operon transcriptional regulatory protein KdpE or b0694 SWALL:KDPE_ECOLI (SWALL:P21866) (225 aa) fasta scores: E(): 3.6e-56, 65.31% id in 222 aa, and to Salmonella typhimurium response regulator in two-component regulatory system with KdpD, regulates kdp operon encoding a high-affinity K translocating ATPase stm0702 SWALL:Q8ZQW5 (EMBL:AE008728) (225 aa) fasta scores: E(): 2.8e-55, 63.51% id in 222 aa; two-component system, regulatory protein KdpE 1358424 kdpE 3094182 kdpE Burkholderia pseudomallei K96243 two-component system, regulatory protein KdpE YP_107797.1 1357726 D 272560 CDS YP_107798.1 53718812 3093536 1358812..1359108 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein msl2463 SWALL:Q98IC7 (EMBL:AP002999) (89 aa) fasta scores: E(): 1.5e-07, 40.22% id in 87 aa; hypothetical protein 1359108 3093536 BPSL1176 Burkholderia pseudomallei K96243 hypothetical protein YP_107798.1 1358812 D 272560 CDS YP_107799.1 53718813 3092893 1359324..1359644 1 NC_006350.1 Similar to Escherichia coli SugE protein or b4148 SWALL:SUGE_ECOLI (SWALL:P30743) (105 aa) fasta scores: E(): 5e-20, 61.53% id in 104 aa, and to Yersinia pestis chaperone ypo0355 SWALL:Q8ZIX9 (EMBL:AJ414142) (104 aa) fasta scores: E(): 1.3e-20, 63.46% id in 104 aa; chaperone 1359644 sugE 3092893 sugE Burkholderia pseudomallei K96243 chaperone YP_107799.1 1359324 D 272560 CDS YP_107800.1 53718814 3094526 1359836..1360453 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2467 or rs01138 SWALL:Q8XWK7 (EMBL:AL646070) (206 aa) fasta scores: E(): 7.7e-39, 60.98% id in 182 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc0485 SWALL:AAM39801 (EMBL:AE012145) (208 aa) fasta scores: E(): 3.8e-24, 48.88% id in 180 aa; hypothetical protein 1360453 3094526 BPSL1178 Burkholderia pseudomallei K96243 hypothetical protein YP_107800.1 1359836 D 272560 CDS YP_107801.1 53718815 3094527 1360450..1363092 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2091 or rs03656 SWALL:Q8XXM2 (EMBL:AL646068) (843 aa) fasta scores: E(): 1.3e-140, 54.94% id in 859 aa, and to Escherichia coli hypothetical protein YbbP or b0496 SWALL:YBBP_ECOLI (SWALL:P77504) (804 aa) fasta scores: E(): 1.4e-29, 32.15% id in 852 aa; hypothetical protein 1363092 3094527 BPSL1179 Burkholderia pseudomallei K96243 hypothetical protein YP_107801.1 1360450 D 272560 CDS YP_107802.1 53718816 3093896 1363156..1363602 1 NC_006350.1 Identical to the C-terminal region of the previously sequenced Burkholderia pseudomallei globin SWALL:Q93SP0 (EMBL:AY030274) (170 aa) fasta scores: E(): 1.3e-64, 99.32% id in 148 aa, and to Ralstonia solanacearum oxygen-binding protein rsc2090 or rs03655 SWALL:Q8XXM3 (EMBL:AL646068) (134 aa) fasta scores: E(): 1.1e-41, 74.43% id in 133 aa, and to Mycobacterium tuberculosis, and Mycobacterium bovis hemoglobin-like protein hbo GlbO or rv2470 or mt2546 or mtv008.26 SWALL:GLBO_MYCTU (SWALL:O53197) (128 aa) fasta scores: E(): 1.5e-10, 37.2% id in 129 aa. Note: The N-terminal region of the previously sequenced database match (SWALL:Q93SP0) does not coincide with the one in BPSL1180, being the first one longer than this CDS. Also this CDS is longer in its N-terminal region than most of its database matches; globin 1363602 3093896 BPSL1180 Burkholderia pseudomallei K96243 globin YP_107802.1 1363156 D 272560 CDS YP_107803.1 53718817 3093897 1363713..1364444 1 NC_006350.1 Similar to Rhizobium loti alanyl-tRNA synthetase mlr0354 SWALL:Q98N10 (EMBL:AP002994) (248 aa) fasta scores: E(): 5e-35, 47.71% id in 241 aa, and to parts of Escherichia coli alanyl-tRNA synthetase AlaS or LovB or b2697 SWALL:SYA_ECOLI (SWALL:P00957) (876 aa) fasta scores: E(): 5.5e-08, 34.61% id in 234 aa; alanyl-tRNA synthetase 1364444 3093897 BPSL1181 Burkholderia pseudomallei K96243 alanyl-tRNA synthetase YP_107803.1 1363713 D 272560 CDS YP_107804.1 53718818 3094687 1364441..1365082 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc2089 or rs03654 SWALL:Q8XXM4 (EMBL:AL646068) (192 aa) fasta scores: E(): 1e-31, 53.15% id in 190 aa, and to Brucella melitensis hypothetical protein bmei0803 SWALL:Q8YHJ5 (EMBL:AE009522) (208 aa) fasta scores: E(): 2.3e-22, 38.61% id in 202 aa. Note: Has a posibble alternative start codon at residue 28; hypothetical protein 1365082 3094687 BPSL1182 Burkholderia pseudomallei K96243 hypothetical protein YP_107804.1 1364441 D 272560 CDS YP_107805.1 53718819 3094688 1365426..1366820 1 NC_006350.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1366820 3094688 BPSL1183 Burkholderia pseudomallei K96243 amidase YP_107805.1 1365426 D 272560 CDS YP_107806.1 53718820 3092922 1367068..1368384 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable MFS transporter pa0703 SWALL:Q9I5M3 (EMBL:AE004506) (438 aa) fasta scores: E(): 3.5e-108, 69.92% id in 419 aa, and to Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 4.3e-48, 36.79% id in 405 aa; sugar-related transport, membrane protein 1368384 3092922 BPSL1184 Burkholderia pseudomallei K96243 sugar-related transport, membrane protein YP_107806.1 1367068 D 272560 CDS YP_107807.1 53718821 3092923 complement(1368695..1370602) 1 NC_006350.1 Similar to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1181 or rs05713 SWALL:Q8Y063 (EMBL:AL646063) (598 aa) fasta scores: E(): 1.1e-27, 26.4% id in 625 aa, and to Neisseria meningitidis hypothetical protein nmb1954 SWALL:Q9JXN7 (EMBL:AE002543) (553 aa) fasta scores: E(): 0.0026, 27.36% id in 570 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 1370602 3092923 BPSL1185 Burkholderia pseudomallei K96243 hypothetical protein YP_107807.1 1368695 R 272560 CDS YP_107808.1 53718822 3093594 complement(1371117..1371932) 1 NC_006350.1 Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase 1371932 3093594 BPSL1186 Burkholderia pseudomallei K96243 glucose-1-dehydrogenase YP_107808.1 1371117 R 272560 CDS YP_107809.1 53718823 3093595 complement(1372307..1372894) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4923 SWALL:YDC3_PSEAE (SWALL:P48636) (195 aa) fasta scores: E(): 2.6e-39, 56.68% id in 187 aa, and to Rhodococcus fascians hypothetical 21.1 kDa protein in fasciation locus Fas6 SWALL:FAS6_RHOFA (SWALL:P46378) (198 aa) fasta scores: E(): 2.1e-28, 53.89% id in 154 aa. Note: This CDS is shorter in its N-terminal region than some of its database matches; decarboxylase 1372894 3093595 BPSL1187 Burkholderia pseudomallei K96243 decarboxylase YP_107809.1 1372307 R 272560 CDS YP_107810.1 53718824 3092213 complement(1372891..1373610) 1 NC_006350.1 Similar to Ralstonia solanacearum transcription regulator protein rsc2086 or rs03651 SWALL:Q8XXM7 (EMBL:AL646068) (231 aa) fasta scores: E(): 3.1e-60, 65.45% id in 220 aa, and to Alcanivorax borkumensis PhaD SWALL:Q9F9H1 (EMBL:AF193866) (233 aa) fasta scores: E(): 4.6e-17, 33.03% id in 221 aa; TetR family transcriptional regulator 1373610 3092213 BPSL1188 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_107810.1 1372891 R 272560 CDS YP_107811.1 53718825 3092214 complement(1373847..1374317) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 diacylglycerol kinase DgkA or b4042 or z5641 or ecs5025 SWALL:KDGL_ECOLI (SWALL:P00556) (121 aa) fasta scores: E(): 3.7e-13, 45.94% id in 111 aa, and to Ralstonia solanacearum probable diacylglycerol kinase transmembrane protein rsc2085 or rs03650 SWALL:Q8XXM8 (EMBL:AL646068) (153 aa) fasta scores: E(): 1.2e-26, 56.29% id in 151 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; kinase 1374317 3092214 BPSL1189 Burkholderia pseudomallei K96243 kinase YP_107811.1 1373847 R 272560 CDS YP_107812.1 53718826 3093908 complement(1374401..1375435) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2084 or rs03649 SWALL:Q8XXM9 (EMBL:AL646068) (356 aa) fasta scores: E(): 1.2e-103, 76.47% id in 340 aa, and to Agrobacterium tumefaciens glycosyltransferase atu2297 or agr_c_4173 SWALL:Q8UD31 (EMBL:AE009179) (363 aa) fasta scores: E(): 1.9e-67, 53.37% id in 326 aa; glycosyltransferase 1375435 3093908 BPSL1190 Burkholderia pseudomallei K96243 glycosyltransferase YP_107812.1 1374401 R 272560 CDS YP_107813.1 53718827 3093909 complement(1375457..1376395) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2083 or rs03648 SWALL:Q8XXN0 (EMBL:AL646068) (314 aa) fasta scores: E(): 5.4e-89, 70.45% id in 308 aa, and to Caulobacter crescentus hypothetical protein cc3344 SWALL:Q9A362 (EMBL:AE005996) (281 aa) fasta scores: E(): 1.3e-66, 61.06% id in 262 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 1376395 3093909 BPSL1191 Burkholderia pseudomallei K96243 hypothetical protein YP_107813.1 1375457 R 272560 CDS YP_107814.1 53718828 3093309 complement(1376486..1376953) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2081 or rs03646 SWALL:Q8XXN2 (EMBL:AL646068) (176 aa) fasta scores: E(): 2.6e-19, 46.75% id in 154 aa, and to Neisseria meningitidis hypothetical protein nmb0710 SWALL:Q9K0A5 (EMBL:AE002425) (188 aa) fasta scores: E(): 2.3e-08, 35.18% id in 162 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; hypothetical protein 1376953 3093309 BPSL1192 Burkholderia pseudomallei K96243 hypothetical protein YP_107814.1 1376486 R 272560 CDS YP_107815.1 53718829 3093310 complement(1377002..1377757) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2080 or rs03645 SWALL:Q8XXN3 (EMBL:AL646068) (283 aa) fasta scores: E(): 9.2e-19, 39.68% id in 257 aa. Note: This CDS is shorter in its N-terminal region than the database match; hypothetical protein 1377757 3093310 BPSL1193 Burkholderia pseudomallei K96243 hypothetical protein YP_107815.1 1377002 R 272560 CDS YP_107816.1 53718830 3093317 complement(1377788..1378210) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2079 or rs03644 SWALL:Q8XXN4 (EMBL:AL646068) (146 aa) fasta scores: E(): 2.5e-16, 50% id in 140 aa; hypothetical protein 1378210 3093317 BPSL1194 Burkholderia pseudomallei K96243 hypothetical protein YP_107816.1 1377788 R 272560 CDS YP_107817.1 53718831 3093318 complement(1378207..1378767) 1 NC_006350.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 1378767 3093318 BPSL1195 Burkholderia pseudomallei K96243 RNA polymerase factor sigma-70 YP_107817.1 1378207 R 272560 CDS YP_107818.1 53718832 3093947 1379163..1380926 1 NC_006350.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit 1380926 ilvI 3093947 ilvI Burkholderia pseudomallei K96243 acetolactate synthase 3 catalytic subunit YP_107818.1 1379163 D 272560 CDS YP_107819.1 53718833 3094328 1381038..1381529 1 NC_006350.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1381529 ilvH 3094328 ilvH Burkholderia pseudomallei K96243 acetolactate synthase 3 regulatory subunit YP_107819.1 1381038 D 272560 CDS YP_107820.1 53718834 3092052 1381612..1382628 1 NC_006350.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1382628 ilvC 3092052 ilvC Burkholderia pseudomallei K96243 ketol-acid reductoisomerase YP_107820.1 1381612 D 272560 CDS YP_107821.1 53718835 3093663 1382750..1383400 1 NC_006350.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1383400 3093663 BPSL1199 Burkholderia pseudomallei K96243 phosphatidylserine decarboxylase YP_107821.1 1382750 D 272560 CDS YP_107822.1 53718836 3093664 1383417..1384289 1 NC_006350.1 Similar to Ralstonia solanacearum CDP-diacylglycerol--serine O-phosphatidyltransferase PssA or rsc2073 or rs03638 SWALL:Q8XXP0 (EMBL:AL646068) (291 aa) fasta scores: E(): 3.3e-79, 71.67% id in 286 aa, and to Helicobacter pylori CDP-diacylglycerol--serine O-phosphatidyltransferase PssA or Ptr or hp1071 SWALL:PSS_HELPY (SWALL:Q48269) (237 aa) fasta scores: E(): 2.9e-23, 35.14% id in 239 aa; phosphatidyltransferase 1384289 3093664 BPSL1200 Burkholderia pseudomallei K96243 phosphatidyltransferase YP_107822.1 1383417 D 272560 CDS YP_107823.1 53718837 3091966 1384648..1386195 1 NC_006350.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1386195 leuA 3091966 leuA Burkholderia pseudomallei K96243 2-isopropylmalate synthase YP_107823.1 1384648 D 272560 CDS YP_107824.1 53718838 3093654 complement(1386330..1387877) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp0113 or rs03009 SWALL:Q8XTJ5 (EMBL:AL646076) (520 aa) fasta scores: E(): 2.4e-111, 65.7% id in 487 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 sulfate transporter YchM SWALL:AAM40826 (EMBL:AE012254) (519 aa) fasta scores: E(): 3.5e-43, 35.16% id in 529 aa; transport-related membrane protein 1387877 3093654 BPSL1202 Burkholderia pseudomallei K96243 transport-related membrane protein YP_107824.1 1386330 R 272560 CDS YP_107825.1 53718839 3093655 complement(1387935..1388570) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 carbonic anhydrase CynT or b0339 or z0435 or ecs0392 SWALL:CYNT_ECOLI (SWALL:P17582) (219 aa) fasta scores: E(): 6e-14, 31.25% id in 192 aa, and to Ralstonia solanacearum carbonic anhydrase rsp0112 or rs03010 SWALL:Q8XTJ6 (EMBL:AL646076) (214 aa) fasta scores: E(): 9.9e-56, 68.39% id in 212 aa; carbonic anhydrase 1388570 3093655 BPSL1203 Burkholderia pseudomallei K96243 carbonic anhydrase YP_107825.1 1387935 R 272560 CDS YP_107826.1 53718840 3092299 complement(1389014..1389514) 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1480 or rs03826 SWALL:Q8XZC1 (EMBL:AL646064) (177 aa) fasta scores: E(): 7.6e-32, 54.32% id in 162 aa, and to Ralstonia solanacearum probable transmembrane protein rsc2071 or rs03636 SWALL:Q8XXP2 (EMBL:AL646068) (173 aa) fasta scores: E(): 6.8e-26, 48.07% id in 156 aa; lipoprotein 1389514 3092299 BPSL1204 Burkholderia pseudomallei K96243 lipoprotein YP_107826.1 1389014 R 272560 CDS YP_107827.1 53718841 3092300 1389893..1391170 1 NC_006350.1 Similar to Ralstonia solanacearum probable transporter signal peptide protein rsc2070 or rs03635 SWALL:Q8XXP3 (EMBL:AL646068) (418 aa) fasta scores: E(): 4.2e-94, 62.2% id in 418 aa, and to Brucella melitensis leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor bmeii0069 SWALL:Q8YDV5 (EMBL:AE009645) (228 aa) fasta scores: E(): 6.7e-14, 30.97% id in 226 aa; amino acid transport system, exported protein 1391170 3092300 BPSL1205 Burkholderia pseudomallei K96243 amino acid transport system, exported protein YP_107827.1 1389893 D 272560 CDS YP_107828.1 53718842 3093559 1391276..1391545 1 NC_006350.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1391545 rpsO 3093559 rpsO Burkholderia pseudomallei K96243 30S ribosomal protein S15 YP_107828.1 1391276 D 272560 CDS YP_107829.1 53718843 3092633 1391849..1393990 1 NC_006350.1 Similar to Escherichia coli polyribonucleotide nucleotidyltransferase Pnp or b3164 SWALL:PNP_ECOLI (SWALL:P05055) (711 aa) fasta scores: E(): 4.3e-169, 64.18% id in 712 aa, and to Ralstonia solanacearum probable polyribonucleotide nucleotidyltransferase rsc2067 or rs03632 SWALL:Q8XXP6 (EMBL:AL646068) (717 aa) fasta scores: E(): 3.6e-213, 81.12% id in 710 aa; polynucleotide phosphorylase 1393990 pnp 3092633 pnp Burkholderia pseudomallei K96243 polynucleotide phosphorylase YP_107829.1 1391849 D 272560 CDS YP_107830.1 53718844 3091522 1394106..1395125 1 NC_006350.1 Similar to Ralstonia solanacearum NADPH quinone oxidoreductase rsc2065 or rs03630 SWALL:Q8XXP8 (EMBL:AL646068) (334 aa) fasta scores: E(): 2e-88, 70.83% id in 336 aa, and to Rhizobium meliloti oxidoreductase r00953 or smc00034 SWALL:Q92RD5 (EMBL:AL591785) (327 aa) fasta scores: E(): 7.1e-48, 54.59% id in 337 aa; oxidoreductase 1395125 3091522 BPSL1208 Burkholderia pseudomallei K96243 oxidoreductase YP_107830.1 1394106 D 272560 CDS YP_107831.1 53718845 3092857 1395230..1395985 1 NC_006350.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1395985 tpiA 3092857 tpiA Burkholderia pseudomallei K96243 triosephosphate isomerase YP_107831.1 1395230 D 272560 CDS YP_107832.1 53718846 3093077 1396065..1396442 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 protein-export membrane protein SecG or b3175 or z4537 or ecs4054 SWALL:SECG_ECOLI (SWALL:P33582) (110 aa) fasta scores: E(): 6.1e-10, 43.59% id in 117 aa, and to Ralstonia solanacearum -export membrane protein rsc2063 or rs03461 SWALL:Q8XXQ0 (EMBL:AL646068) (115 aa) fasta scores: E(): 2.2e-20, 76.78% id in 112 aa; preprotein translocase subunit SecG 1396442 secG 3093077 secG Burkholderia pseudomallei K96243 preprotein translocase subunit SecG YP_107832.1 1396065 D 272560 CDS YP_107833.1 53718847 3094307 1396791..1397150 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1397150 nuoA 3094307 nuoA Burkholderia pseudomallei K96243 NADH dehydrogenase subunit A YP_107833.1 1396791 D 272560 CDS YP_107834.1 53718848 3094308 1397171..1397692 1 NC_006350.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1397692 nuoB 3094308 nuoB Burkholderia pseudomallei K96243 NADH dehydrogenase subunit B YP_107834.1 1397171 D 272560 CDS YP_107835.1 53718849 3092227 1397713..1398315 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1398315 nuoC 3092227 nuoC Burkholderia pseudomallei K96243 NADH dehydrogenase subunit C YP_107835.1 1397713 D 272560 CDS YP_107836.1 53718850 3094788 1398326..1399579 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1399579 nuoD 3094788 nuoD Burkholderia pseudomallei K96243 NADH dehydrogenase subunit D YP_107836.1 1398326 D 272560 CDS YP_107837.1 53718851 3091523 1399748..1400233 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1400233 3091523 BPSL1215 Burkholderia pseudomallei K96243 NADH dehydrogenase subunit E YP_107837.1 1399748 D 272560 CDS YP_107838.1 53718852 3094789 1400230..1401540 1 NC_006350.1 Similar to Rhodobacter capsulatus NADH dehydrogenase I chain F NuoF SWALL:NUOF_RHOCA (SWALL:O07948) (431 aa) fasta scores: E(): 1.3e-77, 48.4% id in 440 aa, and to Ralstonia solanacearum probable NADH dehydrogenase I chain F rsc2057 or rs03622 SWALL:Q8XXQ6 (EMBL:AL646068) (431 aa) fasta scores: E(): 1.4e-159, 88.75% id in 427 aa; NADH dehydrogenase I chain F 1401540 nuoF 3094789 nuoF Burkholderia pseudomallei K96243 NADH dehydrogenase I chain F YP_107838.1 1400230 D 272560 CDS YP_107839.1 53718853 3091552 1401623..1403953 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1403953 3091552 BPSL1217 Burkholderia pseudomallei K96243 NADH dehydrogenase subunit G YP_107839.1 1401623 D 272560 CDS YP_107840.1 53718854 3091497 1403954..1405018 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1405018 nuoH 3091497 nuoH Burkholderia pseudomallei K96243 NADH dehydrogenase subunit H YP_107840.1 1403954 D 272560 CDS YP_107841.1 53718855 3091553 1405034..1405522 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1405522 3091553 BPSL1219 Burkholderia pseudomallei K96243 NADH dehydrogenase subunit I YP_107841.1 1405034 D 272560 CDS YP_107842.1 53718856 3091498 1405632..1406288 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1406288 nuoJ 3091498 nuoJ Burkholderia pseudomallei K96243 NADH dehydrogenase subunit J YP_107842.1 1405632 D 272560 CDS YP_107843.1 53718857 3092686 1406307..1406612 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1406612 nuoK 3092686 nuoK Burkholderia pseudomallei K96243 NADH dehydrogenase subunit K YP_107843.1 1406307 D 272560 CDS YP_107844.1 53718858 3091592 1406630..1408669 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1408669 nuoL 3091592 nuoL Burkholderia pseudomallei K96243 NADH dehydrogenase subunit L YP_107844.1 1406630 D 272560 CDS YP_107845.1 53718859 3091593 1408685..1410175 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1410175 nuoM 3091593 nuoM Burkholderia pseudomallei K96243 NADH dehydrogenase subunit M YP_107845.1 1408685 D 272560 CDS YP_107846.1 53718860 3093346 1410200..1411672 1 NC_006350.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1411672 nuoN 3093346 nuoN Burkholderia pseudomallei K96243 NADH dehydrogenase subunit N YP_107846.1 1410200 D 272560 CDS YP_107847.1 53718861 3092106 1411672..1411977 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2048 or rs03613 SWALL:Q8XXR5 (EMBL:AL646068) (102 aa) fasta scores: E(): 2.5e-17, 53% id in 100 aa; hypothetical protein 1411977 3092106 BPSL1225 Burkholderia pseudomallei K96243 hypothetical protein YP_107847.1 1411672 D 272560 CDS YP_107848.1 53718862 3092107 1412014..1412604 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2047 or rs03612 SWALL:Q8XXR6 (EMBL:AL646068) (205 aa) fasta scores: E(): 2.2e-51, 69.73% id in 185 aa, and to Bacillus subtilis ADP-ribose pyrophosphatase NudF SWALL:ADPP_BACSU (SWALL:P54570) (185 aa) fasta scores: E(): 9.8e-20, 36.78% id in 174 aa; hypothetical protein 1412604 3092107 BPSL1226 Burkholderia pseudomallei K96243 hypothetical protein YP_107848.1 1412014 D 272560 CDS YP_107849.1 53718863 3092015 1412756..1413178 1 NC_006350.1 Similar to Agrobacterium tumefaciens hypothetical protein atu3509 or agr_l_2637 SWALL:Q8UA65 (EMBL:AE009281) (142 aa) fasta scores: E(): 3.1e-16, 42.74% id in 131 aa, and to Rhizobium meliloti hypothetical protein r02616 or smc02441 SWALL:Q92MK0 (EMBL:AL591791) (142 aa) fasta scores: E(): 9.8e-16, 44.85% id in 136 aa; hypothetical protein 1413178 3092015 BPSL1227 Burkholderia pseudomallei K96243 hypothetical protein YP_107849.1 1412756 D 272560 CDS YP_107850.1 53718864 3092016 1413239..1414435 1 NC_006350.1 Similar to Ralstonia solanacearum acyl-CoA dehydrogenase oxidoreductase rsc2045 or rs03610 SWALL:Q8XXR8 (EMBL:AL646068) (398 aa) fasta scores: E(): 1.8e-135, 78.39% id in 398 aa, and to Caulobacter crescentus acyl-CoA dehydrogenase cc1310 SWALL:Q9A8P3 (EMBL:AE005806) (404 aa) fasta scores: E(): 1.5e-97, 60.24% id in 405 aa. Note: Also similar to BPSL0420 (403 aa) fasta scores: E(): 5.3e-88, 58.209% identity in 402 aa overlap; acyl-CoA dehydrogenase 1414435 3092016 BPSL1228 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_107850.1 1413239 D 272560 CDS YP_107851.1 53718865 3091524 1414447..1415580 1 NC_006350.1 Similar to Ralstonia solanacearum acyl-CoA dehydrogenase oxidoreductase rsc2044 or rs03609 SWALL:Q8XXR9 (EMBL:AL646068) (376 aa) fasta scores: E(): 4.4e-80, 60.63% id in 376 aa, and to Caulobacter crescentus acyl-CoA dehydrogenase cc1311 SWALL:Q9A8P2 (EMBL:AE005806) (401 aa) fasta scores: E(): 3.4e-52, 43.5% id in 377 aa; acyl-CoA dehydrogenase 1415580 3091524 BPSL1229 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_107851.1 1414447 D 272560 CDS YP_107852.1 53718866 3091525 1415621..1416079 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2043 or rs03608 SWALL:Q8XXS0 (EMBL:AL646068) (156 aa) fasta scores: E(): 2.3e-27, 48.59% id in 142 aa, and to Agrobacterium tumefaciens hypothetical protein atu2234 or agr_c_4066 SWALL:Q8UD93 (EMBL:AE009173) (169 aa) fasta scores: E(): 7.1e-20, 41.42% id in 140 aa; hypothetical protein 1416079 3091525 BPSL1230 Burkholderia pseudomallei K96243 hypothetical protein YP_107852.1 1415621 D 272560 CDS YP_107853.1 53718867 3091610 1416076..1416558 1 NC_006350.1 Similar to Streptomyces coelicolor hypothetical protein sco1698 or sci30a.19 SWALL:Q9S254 (EMBL:AL096811) (153 aa) fasta scores: E(): 3.7e-27, 52.63% id in 152 aa, and to Ralstonia solanacearum hypothetical protein rsc2042 or rs03607 SWALL:Q8XXS1 (EMBL:AL646068) (162 aa) fasta scores: E(): 3.7e-23, 52.79% id in 161 aa; hypothetical protein 1416558 3091610 BPSL1231 Burkholderia pseudomallei K96243 hypothetical protein YP_107853.1 1416076 D 272560 CDS YP_107854.1 53718868 3091611 1416651..1417913 1 NC_006350.1 lipoprotein 1417913 3091611 BPSL1233 Burkholderia pseudomallei K96243 lipoprotein YP_107854.1 1416651 D 272560 CDS YP_107855.1 53718869 3093348 complement(1418190..1419416) 1 NC_006350.1 Similar to Ralstonia solanacearum probable acyl-CoA dehydrogenase oxidoreductase rsc2020 or rs03588 SWALL:Q8XXU3 (EMBL:AL646067) (420 aa) fasta scores: E(): 4.7e-135, 78.48% id in 409 aa, and to Deinococcus radiodurans acyl-CoA dehydrogenase, dra0196 SWALL:Q9RYW0 (EMBL:AE001862) (415 aa) fasta scores: E(): 1.7e-111, 67.98% id in 406 aa; acyl-CoA dehydrogenase 1419416 3093348 BPSL1234 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_107855.1 1418190 R 272560 CDS YP_107856.1 53718870 3093349 complement(1419460..1420566) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2016 or rs03584 SWALL:Q8XXU7 (EMBL:AL646067) (358 aa) fasta scores: E(): 2e-103, 72.9% id in 358 aa, and to Rhizobium loti hypothetical protein mlr3099 SWALL:Q98GZ9 (EMBL:AP003001) (344 aa) fasta scores: E(): 2.1e-63, 51.89% id in 343 aa; phosphotransferase 1420566 3093349 BPSL1235 Burkholderia pseudomallei K96243 phosphotransferase YP_107856.1 1419460 R 272560 CDS YP_107857.1 53718871 3093129 complement(1420594..1421307) 1 NC_006350.1 Similar to Ralstonia solanacearum phosphoglycerate mutase rsc2015 or rs03583 SWALL:Q8XXU8 (EMBL:AL646067) (244 aa) fasta scores: E(): 8e-50, 59.32% id in 236 aa, and to the N-terminal region of Escherichia coli, and Escherichia coli O157:H7 probable phosphoglycerate mutase 2 GpmB or b4395 or z5997 or ecs5353 SWALL:PMG2_ECOLI (SWALL:P36942) (215 aa) fasta scores: E(): 0.00031, 30.58% id in 170 aa; phosphoglycerate mutase 1421307 3093129 BPSL1236 Burkholderia pseudomallei K96243 phosphoglycerate mutase YP_107857.1 1420594 R 272560 CDS YP_107858.1 53718872 3093130 complement(1421317..1422180) 1 NC_006350.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1422180 3093130 BPSL1237 Burkholderia pseudomallei K96243 enoyl-CoA hydratase YP_107858.1 1421317 R 272560 CDS YP_107859.1 53718873 3093261 1422330..1423004 1 NC_006350.1 Similar to Ralstonia solanacearum probable GST-related protein rsc2012 or rs03580 SWALL:Q8XXV1 (EMBL:AL646067) (218 aa) fasta scores: E(): 7.8e-36, 50.71% id in 209 aa, and to Arabidopsis thaliana glutathione S-transferase 6 Gst6 or at2g47730 or f17a22.12 SWALL:GTH6_ARATH (SWALL:Q96266) (215 aa) fasta scores: E(): 3.3e-07, 27.67% id in 224 aa; glutathione S-transferase-like protein 1423004 3093261 BPSL1238 Burkholderia pseudomallei K96243 glutathione S-transferase-like protein YP_107859.1 1422330 D 272560 CDS YP_107860.1 53718874 3093262 complement(1423224..1424378) 1 NC_006350.1 catalyzes the transfer of an amino moiety; aminotransferase 1424378 3093262 BPSL1239 Burkholderia pseudomallei K96243 aminotransferase YP_107860.1 1423224 R 272560 CDS YP_107861.1 53718875 3094810 complement(1424445..1425113) 1 NC_006350.1 Similar to parts of Ralstonia solanacearum hypothetical protein rsc2010 or rs03578 SWALL:Q8XXV3 (EMBL:AL646067) (161 aa) fasta scores: E(): 8.7e-10, 37.91% id in 211 aa; hypothetical protein 1425113 3094810 BPSL1240 Burkholderia pseudomallei K96243 hypothetical protein YP_107861.1 1424445 R 272560 CDS YP_107862.1 53718876 3094811 1425171..1425953 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2009 or rs03577 SWALL:Q8XXV4 (EMBL:AL646067) (257 aa) fasta scores: E(): 9.5e-66, 67.82% id in 258 aa, and to Escherichia coli protein YaaA or b0006 SWALL:YAAA_ECOLI (SWALL:P11288) (258 aa) fasta scores: E(): 3.3e-56, 56.25% id in 256 aa; hypothetical protein 1425953 3094811 BPSL1241 Burkholderia pseudomallei K96243 hypothetical protein YP_107862.1 1425171 D 272560 CDS YP_107863.1 53718877 3091880 1426012..1427166 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2008 or rs03576 SWALL:Q8XXV5 (EMBL:AL646067) (381 aa) fasta scores: E(): 3.2e-102, 65.42% id in 376 aa, and to Neisseria meningitidis hypothetical protein nmb1073 SWALL:Q9JZF8 (EMBL:AE002458) (376 aa) fasta scores: E(): 3.8e-82, 55.46% id in 375 aa; peptidase 1427166 3091880 BPSL1242 Burkholderia pseudomallei K96243 peptidase YP_107863.1 1426012 D 272560 CDS YP_107864.1 53718878 3091881 complement(1427377..1428036) 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc2007 or rs03575 SWALL:Q8XXV6 (EMBL:AL646067) (251 aa) fasta scores: E(): 6e-13, 34.85% id in 175 aa; hypothetical protein 1428036 3091881 BPSL1243 Burkholderia pseudomallei K96243 hypothetical protein YP_107864.1 1427377 R 272560 CDS YP_107865.1 53718879 3093058 complement(1428157..1428831) 1 NC_006350.1 Low similarity to Pseudomonas aeruginosa hypothetical protein pa4532 SWALL:Q9HVP5 (EMBL:AE004867) (229 aa) fasta scores: E(): 1.4e-09, 27.96% id in 211 aa, and to Vibrio cholerae hypothetical protein vc1870 SWALL:Q9KQX7 (EMBL:AE004263) (220 aa) fasta scores: E(): 3.7e-07, 25.52% id in 192 aa; hypothetical protein 1428831 3093058 BPSL1244 Burkholderia pseudomallei K96243 hypothetical protein YP_107865.1 1428157 R 272560 CDS YP_107866.1 53718880 3093059 complement(1428898..1429806) 1 NC_006350.1 Similar to Azospirillum brasilense FlcA SWALL:O05210 (EMBL:Y12363) (215 aa) fasta scores: E(): 3.4e-11, 31.19% id in 218 aa, and to Bacillus brevis transcriptional regulatory protein DegU SWALL:DEGU_BACBR (SWALL:P54662) (236 aa) fasta scores: E(): 8.4e-08, 25.11% id in 227 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; transcriptional regulator 1429806 3093059 BPSL1245 Burkholderia pseudomallei K96243 transcriptional regulator YP_107866.1 1428898 R 272560 CDS YP_107867.1 53718881 3092146 complement(1429940..1431157) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2005 or rs03573 SWALL:Q8XXV8 (EMBL:AL646067) (403 aa) fasta scores: E(): 1.2e-83, 52.97% id in 404 aa; hypothetical protein 1431157 3092146 BPSL1246 Burkholderia pseudomallei K96243 hypothetical protein YP_107867.1 1429940 R 272560 CDS YP_107868.1 53718882 3092147 1437846..1439735 1 NC_006350.1 Similar to Sus scrofa Xaa-Pro aminopeptidase precursor SWALL:Q95333 (EMBL:U55039) (673 aa) fasta scores: E(): 1.9e-26, 27.72% id in 642 aa, and to Agrobacterium tumefaciens aminopeptidase P atu2070 or agr_c_3749 SWALL:Q8UDQ1 (EMBL:AE009158) (613 aa) fasta scores: E(): 4.8e-26, 30.4% id in 615 aa. Note: Many of the database matches belong to eukaryotic proteins; peptidase 1439735 3092147 BPSL1247 Burkholderia pseudomallei K96243 peptidase YP_107868.1 1437846 D 272560 CDS YP_107869.1 53718883 3094747 complement(1439881..1440954) 1 NC_006350.1 hypothetical protein 1440954 3094747 BPSL1248 Burkholderia pseudomallei K96243 hypothetical protein YP_107869.1 1439881 R 272560 CDS YP_107870.1 53718884 3094748 1441141..1442184 1 NC_006350.1 Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 7.8e-32, 33.53% id in 331 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 1.4e-28, 32.22% id in 332 aa; AraC family transcriptional regulator 1442184 3094748 BPSL1249 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_107870.1 1441141 D 272560 CDS YP_107871.1 53718885 3093522 1442504..1443778 1 NC_006350.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1443778 serA 3093522 serA Burkholderia pseudomallei K96243 D-3-phosphoglycerate dehydrogenase YP_107871.1 1442504 D 272560 CDS YP_107872.1 53718886 3092660 1444338..1444802 1 NC_006350.1 Similar to Streptomyces coelicolor transposase sc6g9.36c or scf12.06 or sc5e9.06C SWALL:Q9XAE6 (EMBL:AL079356) (136 aa) fasta scores: E(): 2.4e-07, 45.12% id in 82 aa, and to Ralstonia solanacearum probable TIS1421-transposase OrfA protein SWALL:Q8XGS3 (EMBL:AL646082) (134 aa) fasta scores: E(): 3.2e-07, 36.5% id in 126 aa; transposase 1444802 3092660 BPSL1251 Burkholderia pseudomallei K96243 transposase YP_107872.1 1444338 D 272560 CDS YP_107873.1 53718887 3092661 complement(1445222..1446247) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa3445 pa3445 SWALL:Q9HYG1 (EMBL:AE004765) (323 aa) fasta scores: E(): 6.2e-65, 58.57% id in 309 aa, and to Escherichia coli aliphatic sulfonates binding protein precursor SsuA or b0936 SWALL:SSUA_ECOLI (SWALL:P75853) (319 aa) fasta scores: E(): 4e-43, 43.23% id in 303 aa; hypothetical protein 1446247 3092661 BPSL1252 Burkholderia pseudomallei K96243 hypothetical protein YP_107873.1 1445222 R 272560 CDS YP_107874.1 53718888 3094220 1447136..1448863 1 NC_006350.1 N-terminal region similar to Ralstonia solanacearum probable transmembrane protein rsp0132 or rs02988 SWALL:Q8XTH8 (EMBL:AL646076) (478 aa) fasta scores: E(): 1.6e-45, 48.28% id in 292 aa, and C-terminal region similar to Erwinia amylovora sensor kinase HrpX SWALL:Q9X3S8 (EMBL:AF083877) (494 aa) fasta scores: E(): 6.6e-24, 41.35% id in 237 aa; integral membrane protein/sensor kinase 1448863 3094220 BPSL1253 Burkholderia pseudomallei K96243 integral membrane protein/sensor kinase YP_107874.1 1447136 D 272560 CDS YP_107875.1 53718889 3094221 1449388..1450464 1 NC_006350.1 hypothetical protein 1450464 3094221 BPSL1254 Burkholderia pseudomallei K96243 hypothetical protein YP_107875.1 1449388 D 272560 CDS YP_107876.1 53718890 3093738 1450504..1450650 1 NC_006350.1 hypothetical protein 1450650 3093738 BPSL1255 Burkholderia pseudomallei K96243 hypothetical protein YP_107876.1 1450504 D 272560 CDS YP_107877.1 53718891 3093739 1450878..1451594 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable cytochrome c pa2482 SWALL:Q9I100 (EMBL:AE004676) (217 aa) fasta scores: E(): 1e-14, 32.71% id in 214 aa, and to Ralstonia solanacearum cytochrome c signal peptide protein rsc0197 or rs00629 SWALL:Q8Y2Y4 (EMBL:AL646058) (206 aa) fasta scores: E(): 3.4e-14, 34.8% id in 204 aa; cytochrome c 1451594 3093739 BPSL1256 Burkholderia pseudomallei K96243 cytochrome c YP_107877.1 1450878 D 272560 CDS YP_107878.1 53718892 3092390 1451594..1452886 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable cytochrome c pa4571 SWALL:Q9HVL3 (EMBL:AE004870) (675 aa) fasta scores: E(): 3.5e-49, 38.16% id in 414 aa, and to Gluconobacter oxydans alcohol dehydrogenase cytochrome c subunit precursor AdhB SWALL:CYCA_GLUOX (SWALL:Q47945) (478 aa) fasta scores: E(): 1.6e-38, 40.33% id in 424 aa; cytochrome c 1452886 3092390 BPSL1257 Burkholderia pseudomallei K96243 cytochrome c YP_107878.1 1451594 D 272560 CDS YP_107879.1 53718893 3092391 1452894..1453076 1 NC_006350.1 hypothetical protein 1453076 3092391 BPSL1258 Burkholderia pseudomallei K96243 hypothetical protein YP_107879.1 1452894 D 272560 CDS YP_107880.1 53718894 3094156 1453089..1453661 1 NC_006350.1 Similar to Thermus thermophilus cytochrome c oxidase polypeptide II CbaB or CtaC SWALL:COX2_THETH (SWALL:P98052) (168 aa) fasta scores: E(): 7.7e-16, 32.89% id in 152 aa, and to Bacillus halodurans cytochrome c oxidase subunit II bh0740 SWALL:Q9KEV9 (EMBL:AP001509) (157 aa) fasta scores: E(): 8.8e-14, 29.67% id in 155 aa; cytochrome c oxidase subunit II-like protein 1453661 3094156 BPSL1259 Burkholderia pseudomallei K96243 cytochrome c oxidase subunit II-like protein YP_107880.1 1453089 D 272560 CDS YP_107881.1 53718895 3094157 1453648..1455273 1 NC_006350.1 Identical to previously sequenced although longer in its N-terminal region than Burkholderia pseudomallei cytochrome c oxidase subunit 1 SWALL:Q9RQP4 (EMBL:AF087002) (512 aa) fasta scores: E(): 1.3e-201, 99.8% id in 512 aa, and to Thermus thermophilus cytochrome c oxidase polypeptide I CbaA SWALL:COX1_THETH (SWALL:Q56408) (562 aa) fasta scores: E(): 6.5e-67, 37.84% id in 547 aa; cytochrome c oxidase subunit 1 1455273 3094157 BPSL1260 Burkholderia pseudomallei K96243 cytochrome c oxidase subunit 1 YP_107881.1 1453648 D 272560 CDS YP_107882.1 53718896 3094030 1455270..1456058 1 NC_006350.1 Similar in its C-terminal region to Pseudomonas aeruginosa cytochrome c4 precursor pa5490 SWALL:CYC4_PSEAE (SWALL:P00106) (201 aa) fasta scores: E(): 3.8e-12, 34.09% id in 176 aa, and to Rhizobium meliloti cytochrome c class I protein, probably cytochrome c4 CycA or rb0945 or smb21367 SWALL:Q92UY9 (EMBL:AL603645) (374 aa) fasta scores: E(): 4.5e-08, 31.01% id in 187 aa. N-terminal region presents possible hydrophobic membrane spanning domains; cytochrome c-like protein 1456058 3094030 BPSL1261 Burkholderia pseudomallei K96243 cytochrome c-like protein YP_107882.1 1455270 D 272560 CDS YP_107883.1 53718897 3094031 complement(1456647..1458101) 1 NC_006350.1 N-terminal region similar to Vibrio cholerae hypothetical protein vca0034 SWALL:Q9KND1 (EMBL:AE004347) (290 aa) fasta scores: E(): 8e-10, 26.13% id in 264 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc1373 SWALL:AAM40671 (EMBL:AE012236) (266 aa) fasta scores: E(): 5.4e-08, 26.37% id in 254 aa; hypothetical protein 1458101 3094031 BPSL1262 Burkholderia pseudomallei K96243 hypothetical protein YP_107883.1 1456647 R 272560 CDS YP_107884.1 53718898 3091526 complement(1458136..1459878) 1 NC_006350.1 Similar to the C-terminal region of Pseudomonas aeruginosa hypothetical protein pa4601 SWALL:Q9HVI8 (EMBL:AE004874) (1415 aa) fasta scores: E(): 1.2e-59, 36.11% id in 540 aa, and to Rhizobium meliloti hypothetical protein r00959 or smc00038 SWALL:Q92KJ3 (EMBL:AL591785) (772 aa) fasta scores: E(): 6.1e-53, 37.36% id in 447 aa; hypothetical protein 1459878 3091526 BPSL1263 Burkholderia pseudomallei K96243 hypothetical protein YP_107884.1 1458136 R 272560 CDS YP_107885.1 53718899 3091527 1460171..1460719 1 NC_006350.1 Similar to Caulobacter crescentus bacterioferritin comigratory protein, cc1673 SWALL:Q9A7P7 (EMBL:AE005842) (177 aa) fasta scores: E(): 1.4e-26, 51.16% id in 172 aa, and to Escherichia coli, and Escherichia coli O157:H7 bacterioferritin comigratory protein Bcp or b2480 or z3739 or ecs3342 SWALL:BCP_ECOLI (SWALL:P23480) (156 aa) fasta scores: E(): 2.9e-08, 29.74% id in 158 aa; AhpC/TSA family protein 1460719 3091527 BPSL1264 Burkholderia pseudomallei K96243 AhpC/TSA family protein YP_107885.1 1460171 D 272560 CDS YP_107886.1 53718900 3091446 complement(1461243..1461866) 1 NC_006350.1 Similar to Listeria monocytogenes hypothetical protein lmo2391 SWALL:Q8Y4P4 (EMBL:AL591983) (209 aa) fasta scores: E(): 2.5e-19, 37.98% id in 208 aa, and to Bacillus subtilis hypothetical protein YhfK SWALL:O07609 (EMBL:Y14083) (214 aa) fasta scores: E(): 5.7e-14, 30.37% id in 214 aa; hypothetical protein 1461866 3091446 BPSL1265 Burkholderia pseudomallei K96243 hypothetical protein YP_107886.1 1461243 R 272560 CDS YP_107887.1 53718901 3091447 complement(1462488..1465790) 1 NC_006350.1 Similar to Escherichia coli hypothetical protein YegO or b2076 SWALL:YEGO_ECOLI (SWALL:P76399) (1025 aa) fasta scores: E(): 4.3e-154, 56.87% id in 1076 aa, and to Ralstonia solanacearum probable drug efflux transmembrane protein rsp1199 or rs03143 SWALL:Q8XQM3 (EMBL:AL646083) (1033 aa) fasta scores: E(): 4.8e-165, 60.62% id in 1082 aa; transport system membrane protein 1465790 3091447 BPSL1266 Burkholderia pseudomallei K96243 transport system membrane protein YP_107887.1 1462488 R 272560 CDS YP_107888.1 53718902 3093325 complement(1465791..1468901) 1 NC_006350.1 Similar to Ralstonia solanacearum probable drug efflux pump transmembrane protein rsp1198 or rs03142 SWALL:Q8XQM4 (EMBL:AL646083) (1041 aa) fasta scores: E(): 0, 70.66% id in 1026 aa, and to Escherichia coli hypothetical protein YegN or b2075 SWALL:YEGN_ECOLI (SWALL:P76398) (1040 aa) fasta scores: E(): 0, 62.98% id in 1024 aa; transport system membrane protein 1468901 3093325 BPSL1267 Burkholderia pseudomallei K96243 transport system membrane protein YP_107888.1 1465791 R 272560 CDS YP_107889.1 53718903 3093326 complement(1468915..1470252) 1 NC_006350.1 Similar to Ralstonia solanacearum resistance transmembrane protein rsp1197 or rs03141 SWALL:Q8XQM5 (EMBL:AL646083) (449 aa) fasta scores: E(): 4.6e-70, 53.22% id in 434 aa, and to Escherichia coli hypothetical protein YegM precursor or b2074 SWALL:YEGM_ECOLI (SWALL:P76397) (415 aa) fasta scores: E(): 1.3e-55, 44.96% id in 407 aa; transport system membrane protein 1470252 3093326 BPSL1268 Burkholderia pseudomallei K96243 transport system membrane protein YP_107889.1 1468915 R 272560 CDS YP_107890.1 53718904 3091944 complement(1470736..1471563) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1630 SWALL:Q9I392 (EMBL:AE004590) (288 aa) fasta scores: E(): 1.9e-27, 37.34% id in 241 aa, and to Escherichia coli MHP operon transcriptional activator MhpR or b0346 SWALL:MHPR_ECOLI (SWALL:P77569) (315 aa) fasta scores: E(): 2.2e-10, 28.51% id in 249 aa; IclR family transcriptional regulator 1471563 3091944 BPSL1269 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_107890.1 1470736 R 272560 CDS YP_107891.1 53718905 3091945 complement(1472111..1474072) 1 NC_006350.1 Similar to Xanthomonas campestris pv. campestris str. ATCC 33913 alkaline phosphatase PhoX SWALL:AAM41064 (EMBL:AE012279) (661 aa) fasta scores: E(): 2e-184, 73.7% id in 658 aa; exported alkaline phosphatase 1474072 3091945 BPSL1270 Burkholderia pseudomallei K96243 exported alkaline phosphatase YP_107891.1 1472111 R 272560 CDS YP_107892.1 53718906 3093525 1474323..1474844 1 NC_006350.1 hypothetical protein 1474844 3093525 BPSL1271 Burkholderia pseudomallei K96243 hypothetical protein YP_107892.1 1474323 D 272560 CDS YP_107893.1 53718907 3093526 1474934..1475395 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0526 or rs00405 SWALL:Q8XSF0 (EMBL:AL646079) (143 aa) fasta scores: E(): 2.5e-23, 57.14% id in 140 aa, and to Streptomyces coelicolor hypothetical protein sco2652 or sc8e4a.22 SWALL:Q9L1Y3 (EMBL:AL138662) (144 aa) fasta scores: E(): 1.1e-14, 44.28% id in 140 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein 1475395 3093526 BPSL1272 Burkholderia pseudomallei K96243 hypothetical protein YP_107893.1 1474934 D 272560 CDS YP_107894.1 53718908 3093841 1475662..1476288 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0741 SWALL:Q9I5I8 (EMBL:AE004509) (213 aa) fasta scores: E(): 3.7e-28, 46.47% id in 213 aa, and to Agrobacterium tumefaciens hypothetical protein atu1999 or agr_c_3633 SWALL:Q8UDW9 (EMBL:AE009151) (203 aa) fasta scores: E(): 2.1e-26, 48.09% id in 210 aa; hypothetical protein 1476288 3093841 BPSL1273 Burkholderia pseudomallei K96243 hypothetical protein YP_107894.1 1475662 D 272560 CDS YP_107895.1 53718909 3093842 complement(1477083..1477739) 1 NC_006350.1 hypothetical protein 1477739 3093842 BPSL1274 Burkholderia pseudomallei K96243 hypothetical protein YP_107895.1 1477083 R 272560 CDS YP_107896.1 53718910 3094265 1477886..1478353 1 NC_006350.1 Similar to Zymomonas mobilis glutamate uptake regulatory protein Grp SWALL:GRP_ZYMMO (SWALL:P74996) (164 aa) fasta scores: E(): 4.3e-25, 46.3% id in 149 aa, to Caulobacter crescentus transcriptional regulator, AsnC family cc0424 SWALL:Q9AB10 (EMBL:AE005714) (164 aa) fasta scores: E(): 2.1e-35, 63.75% id in 149 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical transcriptional regulator YbaO or b0447 or z0555 or ecs0501 SWALL:YBAO_ECOLI (SWALL:P54986) (152 aa) fasta scores: E(): 3.7e-32, 56.66% id in 150 aa; AsnC family transcriptional regulator 1478353 3094265 BPSL1275 Burkholderia pseudomallei K96243 AsnC family transcriptional regulator YP_107896.1 1477886 D 272560 CDS YP_107897.1 53718911 3094266 complement(1478485..1479264) 1 NC_006350.1 Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 1.8e-31, 46.66% id in 240 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa3538 SWALL:Q9HY73 (EMBL:AE004774) (360 aa) fasta scores: E(): 3.5e-43, 59.83% id in 239 aa. Note: This CDS is shorter in its C-terminal region than most of its database matches; ABC transporter ATP-binding protein 1479264 3094266 BPSL1276 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_107897.1 1478485 R 272560 CDS YP_107898.1 53718912 3093930 complement(1479266..1480978) 1 NC_006350.1 Similar to Agrobacterium tumefaciens ABC transporter membrane spanning protein FbpA3 or atu0408 or agr_c_717 SWALL:Q8UI90 (EMBL:AE009011) (558 aa) fasta scores: E(): 1.1e-101, 55.91% id in 558 aa, and to Synechocystis sp. iron utilization protein HitB or slr0327 SWALL:Q55534 (EMBL:D63999) (557 aa) fasta scores: E(): 5.1e-65, 40.18% id in 535 aa. Note: this CDS is a few amino acid residues longer in its N-terminal region than most of its database matches; ABC transporter membrane protein 1480978 3093930 BPSL1277 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_107898.1 1479266 R 272560 CDS YP_107899.1 53718913 3093931 complement(1480968..1482023) 1 NC_006350.1 Similar to Serratia marcescens iron(III)-binding periplasmic protein precursor SfuA SWALL:SFUA_SERMA (SWALL:P21408) (338 aa) fasta scores: E(): 1.6e-15, 27.94% id in 340 aa, and to Brucella melitensis iron(III)-binding periplasmic protein precursor bmeii0584 SWALL:Q8YCE7 (EMBL:AE009695) (338 aa) fasta scores: E(): 4.7e-83, 64.77% id in 335 aa; ABC transporter iron-binding exported protein 1482023 3093931 BPSL1278 Burkholderia pseudomallei K96243 ABC transporter iron-binding exported protein YP_107899.1 1480968 R 272560 CDS YP_107900.1 53718914 3093555 1482263..1482442 1 NC_006350.1 hypothetical protein 1482442 3093555 BPSL1279 Burkholderia pseudomallei K96243 hypothetical protein YP_107900.1 1482263 D 272560 CDS YP_107901.1 53718915 3093556 complement(1482584..1483948) 1 NC_006350.1 Similar to Escherichia coli phenylalanine-specific permease PheP or b0576 SWALL:PHEP_ECOLI (SWALL:P24207) (458 aa) fasta scores: E(): 9.6e-71, 43.91% id in 444 aa, and to Escherichia coli, and Escherichia coli O157:H7 proline-specific permease ProY or b0402 or z0500 or ecs0452 SWALL:PROY_ECOLI (SWALL:P77327) (457 aa) fasta scores: E(): 7.1e-103, 61.77% id in 450 aa; amino acid transport system, membrane protein 1483948 3093556 BPSL1280 Burkholderia pseudomallei K96243 amino acid transport system, membrane protein YP_107901.1 1482584 R 272560 CDS YP_107902.1 53718916 3091577 complement(1484133..1486409) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2889 or rs00211 SWALL:Q8XVE2 (EMBL:AL646072) (740 aa) fasta scores: E(): 7.5e-60, 32.04% id in 752 aa, and to Salmonella typhi membrane protein sty1095 SWALL:Q8Z7R8 (EMBL:AL627269) (717 aa) fasta scores: E(): 1.3e-24, 25.21% id in 694 aa; hypothetical protein 1486409 3091577 BPSL1281 Burkholderia pseudomallei K96243 hypothetical protein YP_107902.1 1484133 R 272560 CDS YP_107903.1 53718917 3091578 1487013..1490357 1 NC_006350.1 Similar to Chlorobium tepidum TLS exodeoxyribonuclease V, gamma subunit RecC SWALL:AAM72301 (EMBL:AE012870) (1065 aa) fasta scores: E(): 2.8e-63, 32.27% id in 1137 aa, and to Escherichia coli exodeoxyribonuclease V gamma chain RecC or b2822 SWALL:EX5C_ECOLI (SWALL:P07648) (1122 aa) fasta scores: E(): 3.2e-50, 29.65% id in 1177 aa; exodeoxyribonuclease V gamma chain 1490357 3091578 BPSL1282 Burkholderia pseudomallei K96243 exodeoxyribonuclease V gamma chain YP_107903.1 1487013 D 272560 CDS YP_107904.1 53718918 3092458 1490354..1494166 1 NC_006350.1 Similar to Escherichia coli exodeoxyribonuclease V beta chain RecB or RorA or b2820 SWALL:EX5B_ECOLI (SWALL:P08394) (1180 aa) fasta scores: E(): 2.5e-16, 33.74% id in 1292 aa, and to Neisseria meningitidis RecB SWALL:Q8RMG4 (EMBL:AF495855) (1204 aa) fasta scores: E(): 5.6e-41, 33.64% id in 1299 aa; exodeoxyribonuclease V subunit beta 1494166 3092458 BPSL1283 Burkholderia pseudomallei K96243 exodeoxyribonuclease V subunit beta YP_107904.1 1490354 D 272560 CDS YP_107905.1 53718919 3092459 1494163..1496859 1 NC_006350.1 Similar to Escherichia coli exodeoxyribonuclease V alpha chain RecD or b2819 SWALL:EX5A_ECOLI (SWALL:P04993) (608 aa) fasta scores: E(): 4.3e-28, 30.05% id in 845 aa, and to Salmonella typhimurium exonuclease V, alpha chain RecD or stm2993 SWALL:Q8ZMB7 (EMBL:AE008837) (611 aa) fasta scores: E(): 9.7e-28, 31.19% id in 856 aa. Note: This CDS contains an internal region (from approx. residue 330 to approx. residue 615) that presents little or no similarity to the database matches; exodeoxyribonuclease V subunit alpha 1496859 3092459 BPSL1284 Burkholderia pseudomallei K96243 exodeoxyribonuclease V subunit alpha YP_107905.1 1494163 D 272560 CDS YP_107906.1 53718920 3092812 1496856..1497260 1 NC_006350.1 Similar to Escherichia coli hypothetical protein YaeJ or b0191 SWALL:YAEJ_ECOLI (SWALL:P40711) (140 aa) fasta scores: E(): 2.4e-24, 62.3% id in 130 aa, and to Salmonella typhi release factor sty0265 SWALL:Q8Z994 (EMBL:AL627266) (140 aa) fasta scores: E(): 7e-23, 57.48% id in 127 aa; peptidyl-tRNA hydrolase domain-containing protein 1497260 3092812 BPSL1285 Burkholderia pseudomallei K96243 peptidyl-tRNA hydrolase domain-containing protein YP_107906.1 1496856 D 272560 CDS YP_107907.1 53718921 3092813 complement(1497670..1498881) 1 NC_006350.1 Similar to Clostridium acetobutylicum sensory protein, containing EAL-domain cac0322 SWALL:Q97M76 (EMBL:AE007546) (412 aa) fasta scores: E(): 2.7e-21, 27.22% id in 393 aa, and to Pseudomonas aeruginosa hypothetical protein pa3258 SWALL:Q9HYY2 (EMBL:AE004748) (601 aa) fasta scores: E(): 2.1e-18, 34.97% id in 223 aa. Note: This CDS is shorter in its C-terminal region than most of its database matches; hypothetical protein 1498881 3092813 BPSL1286 Burkholderia pseudomallei K96243 hypothetical protein YP_107907.1 1497670 R 272560 CDS YP_107908.1 53718922 3094649 complement(1499926..1500858) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2507 or rs01075 SWALL:Q8XWG7 (EMBL:AL646070) (310 aa) fasta scores: E(): 3.3e-43, 51.85% id in 297 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu2079 or agr_c_3767 SWALL:Q8UDP2 (EMBL:AE009158) (329 aa) fasta scores: E(): 7.1e-25, 34.2% id in 307 aa; hypothetical protein 1500858 3094649 BPSL1287 Burkholderia pseudomallei K96243 hypothetical protein YP_107908.1 1499926 R 272560 CDS YP_107909.1 53718923 3094650 complement(1501151..1501375) 1 NC_006350.1 lipoprotein 1501375 3094650 BPSL1288 Burkholderia pseudomallei K96243 lipoprotein YP_107909.1 1501151 R 272560 CDS YP_107910.1 53718924 3093217 complement(1501627..1501839) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 osmotically inducible lipoprotein B precursor OsmB or b1283 or z2523 or ecs1856 SWALL:OSMB_ECOLI (SWALL:P17873) (72 aa) fasta scores: E(): 7.1e-06, 54.83% id in 62 aa, and to Yersinia pestis osmotically inducible lipoprotein B ypo2229 SWALL:Q8ZEE4 (EMBL:AJ414151) (71 aa) fasta scores: E(): 2.4e-07, 51.51% id in 66 aa; osmotically inducible lipoprotein B 1501839 osmB 3093217 osmB Burkholderia pseudomallei K96243 osmotically inducible lipoprotein B YP_107910.1 1501627 R 272560 CDS YP_107911.1 53718925 3092226 complement(1502063..1503994) 1 NC_006350.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 1503994 thiC 3092226 thiC Burkholderia pseudomallei K96243 thiamine biosynthesis protein ThiC YP_107911.1 1502063 R 272560 CDS YP_107912.1 53718926 3093503 complement(1504266..1504625) 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 1504625 3093503 BPSL1290a Burkholderia pseudomallei K96243 hypothetical protein YP_107912.1 1504266 R 272560 CDS YP_107913.1 53718927 3093504 1504644..1504934 1 NC_006350.1 hypothetical protein 1504934 3093504 BPSL1291 Burkholderia pseudomallei K96243 hypothetical protein YP_107913.1 1504644 D 272560 CDS YP_107916.1 53718930 3094524 1507098..1507889 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0620 or rs01521 SWALL:Q8Y1R9 (EMBL:AL646060) (257 aa) fasta scores: E(): 3e-82, 73.01% id in 252 aa, and to Anabaena sp. hypothetical protein lr2944 SWALL:Q8YSY5 (EMBL:AP003591) (240 aa) fasta scores: E(): 3e-30, 39.2% id in 250 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 1507889 3094524 BPSL1294 Burkholderia pseudomallei K96243 hypothetical protein YP_107916.1 1507098 D 272560 CDS YP_107917.1 53718931 3094525 1508343..1509278 1 NC_006350.1 Similar to Salmonella typhi membrane protein sty2198 SWALL:Q8Z5Q8 (EMBL:AL627272) (306 aa) fasta scores: E(): 9.5e-30, 40.55% id in 286 aa, and to Yersinia pestis membrane protein ypo1203 SWALL:Q8ZGS7 (EMBL:AJ414147) (296 aa) fasta scores: E(): 5.3e-29, 39% id in 300 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 1509278 3094525 BPSL1295 Burkholderia pseudomallei K96243 hypothetical protein YP_107917.1 1508343 D 272560 CDS YP_107918.1 53718932 3092525 complement(1509665..1510861) 1 NC_006350.1 Similar to Clostridium acetobutylicum integral membrane protein similar to antibiotic resistance protein B.subtilis cac0560 SWALL:Q97LK0 (EMBL:AE007571) (441 aa) fasta scores: E(): 6.3e-55, 43.35% id in 376 aa, and to Escherichia coli hypothetical protein YgaY or b2680/b2681 SWALL:YGAY_ECOLI (SWALL:P76628) (394 aa) fasta scores: E(): 1.7e-48, 42.07% id in 385 aa; hypothetical protein 1510861 3092525 BPSL1296 Burkholderia pseudomallei K96243 hypothetical protein YP_107918.1 1509665 R 272560 CDS YP_107919.1 53718933 3092526 1511140..1511928 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0114 or rs03008 SWALL:Q8XTJ4 (EMBL:AL646076) (260 aa) fasta scores: E(): 1.5e-59, 69.44% id in 252 aa, and to Streptomyces coelicolor integral membrane protein sco6371 or sc4a2.07 SWALL:O86663 (EMBL:AL031182) (279 aa) fasta scores: E(): 1.5e-43, 54.43% id in 237 aa; hypothetical protein 1511928 3092526 BPSL1297 Burkholderia pseudomallei K96243 hypothetical protein YP_107919.1 1511140 D 272560 CDS YP_107920.1 53718934 3093386 1512096..1512506 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsp0115 or rs03007 SWALL:Q8XTJ3 (EMBL:AL646076) (135 aa) fasta scores: E(): 1.2e-21, 58.2% id in 134 aa; hypothetical protein 1512506 3093386 BPSL1298 Burkholderia pseudomallei K96243 hypothetical protein YP_107920.1 1512096 D 272560 CDS YP_107921.1 53718935 3093387 complement(1512862..1513689) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1795 or rs04195 SWALL:Q8XYG3 (EMBL:AL646066) (282 aa) fasta scores: E(): 2.8e-54, 53.54% id in 282 aa, and to Streptomyces avermitilis cyclic nucleotide phosphodiesterase SWALL:Q93GX3 (EMBL:AB070957) (257 aa) fasta scores: E(): 5.3e-29, 38.99% id in 259 aa; phosphodiesterase 1513689 3093387 BPSL1299 Burkholderia pseudomallei K96243 phosphodiesterase YP_107921.1 1512862 R 272560 CDS YP_107922.1 53718936 3091741 complement(1513884..1514912) 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1794 or rs04193 SWALL:Q8XYG4 (EMBL:AL646066) (359 aa) fasta scores: E(): 1.5e-68, 64.36% id in 348 aa, and to Escherichia coli ferric transport ATP-binding protein AfuC or b0262 SWALL:AFUC_ECOLI (SWALL:P37009) (348 aa) fasta scores: E(): 1.9e-36, 40.76% id in 341 aa; ABC transporter ATP-binding protein 1514912 3091741 BPSL1300 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_107922.1 1513884 R 272560 CDS YP_107923.1 53718937 3091742 complement(1515088..1516002) 1 NC_006350.1 Similar to Ralstonia solanacearum probable permease transmembrane ABC transporter protein rsc1793 or rs04192 SWALL:Q8XYG5 (EMBL:AL646066) (265 aa) fasta scores: E(): 4.6e-63, 71.59% id in 250 aa, and to Escherichia coli hypothetical ABC transporter permease YdcV or b1443 SWALL:YDCV_ECOLI (SWALL:P77505) (264 aa) fasta scores: E(): 6.5e-12, 33.84% id in 263 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; ABC transporter membrane protein 1516002 3091742 BPSL1301 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_107923.1 1515088 R 272560 CDS YP_107924.1 53718938 3091484 complement(1517203..1518027) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 molybdenum transport system permease ModB or ChlJ or b0764 or z0934 or ecs0792 SWALL:MODB_ECOLI (SWALL:P09834) (229 aa) fasta scores: E(): 1.3e-13, 32.03% id in 206 aa, and to Ralstonia solanacearum probable transport system permease transmembrane ABC transporter protein rsc1792 or rs04191 SWALL:Q8XYG6 (EMBL:AL646066) (282 aa) fasta scores: E(): 4.1e-70, 70.58% id in 272 aa. Note: this CDS is longer in its N-terminal region than some of its database matches; hypothetical protein 1518027 3091484 BPSL1302 Burkholderia pseudomallei K96243 hypothetical protein YP_107924.1 1517203 R 272560 CDS YP_107925.1 53718939 3091485 complement(1518129..1519190) 1 NC_006350.1 Similar to Ralstonia solanacearum probable solute-binding periplasmic rsc1791 or rs04190 SWALL:Q8XYG7 (EMBL:AL646066) (343 aa) fasta scores: E(): 1.9e-99, 73.51% id in 336 aa, and to Campylobacter jejuni periplasmic solute-binding protein cj0727 SWALL:Q9PPI0 (EMBL:AL139076) (348 aa) fasta scores: E(): 1.6e-27, 34.33% id in 300 aa; hypothetical protein 1519190 3091485 BPSL1303 Burkholderia pseudomallei K96243 hypothetical protein YP_107925.1 1518129 R 272560 CDS YP_107926.1 53718940 3093964 complement(1519247..1520281) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ribose operon repressor RbsR or b3753 or z5254 or ecs4695 SWALL:RBSR_ECOLI (SWALL:P25551) (329 aa) fasta scores: E(): 6.4e-26, 33.64% id in 321 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc1790 or rs04189 SWALL:Q8XYG8 (EMBL:AL646066) (360 aa) fasta scores: E(): 2.4e-62, 56.39% id in 344 aa; LacI family transcriptional regulator 1520281 3093964 BPSL1304 Burkholderia pseudomallei K96243 LacI family transcriptional regulator YP_107926.1 1519247 R 272560 CDS YP_107927.1 53718941 3093965 complement(1520978..1521415) 1 NC_006350.1 No significant database matches to the full length CDS. N-terminus is similar to the N-terminal regions of Burkholderia cepacia outer membrane protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 0.0057, 44.59% id in 74 aa, and Ralstonia solanacearum probable porin transmembrane protein RS04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 0.024, 42.85% id in 63 aa; hypothetical protein 1521415 3093965 BPSL1304A Burkholderia pseudomallei K96243 hypothetical protein YP_107927.1 1520978 R 272560 CDS YP_107928.1 53718942 3094731 complement(1521614..1522060) 1 NC_006350.1 Poor database matches. Weakly similar to an internal region of Mycobacterium tuberculosis, and Mycobacterium bovis lipoprotein precursor LppW SWALL:LPPW_MYCTU (SWALL:Q10823) (314 aa) fasta scores: E(): 1.4, 34.74% id in 118 aa; hypothetical protein 1522060 3094731 BPSL1304B Burkholderia pseudomallei K96243 hypothetical protein YP_107928.1 1521614 R 272560 CDS YP_107929.1 53718943 3094732 complement(1522632..1523786) 1 NC_006350.1 hypothetical protein 1523786 3094732 BPSL1305 Burkholderia pseudomallei K96243 hypothetical protein YP_107929.1 1522632 R 272560 CDS YP_107930.1 53718944 3094471 complement(1524128..1525492) 1 NC_006350.1 C-terminus is similar to an internal region of Salmonella typhimurium membrane domain involved in signal transduction, diguanylate cyclase/phosphodiesterase domain 1, diguanylate cyclase/phosphodiesterase domain 2 stm3388 SWALL:Q8ZLN7 (EMBL:AE008856) (699 aa) fasta scores: E(): 1.8e-18, 30.02% id in 393 aa. C-terminal region is similar to Rhizobium loti response regulator protein mll0859 SWALL:Q98LV6 (EMBL:AP002995) (408 aa) fasta scores: E(): 2.3e-20, 43.59% id in 195 aa; hypothetical protein 1525492 3094471 BPSL1306 Burkholderia pseudomallei K96243 hypothetical protein YP_107930.1 1524128 R 272560 CDS YP_107931.1 53718945 3094472 1526205..1526807 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0712 or rs01737 SWALL:Q8XRW9 (EMBL:AL646080) (200 aa) fasta scores: E(): 1.4e-48, 57.5% id in 200 aa, and to Rhizobium loti hypothetical protein mll4476 SWALL:Q98DZ5 (EMBL:AP003004) (209 aa) fasta scores: E(): 1.5e-16, 30.76% id in 195 aa; hypothetical protein 1526807 3094472 BPSL1307 Burkholderia pseudomallei K96243 hypothetical protein YP_107931.1 1526205 D 272560 CDS YP_107932.1 53718946 3094140 1526860..1527657 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0711 or rs01738 SWALL:Q8XRX0 (EMBL:AL646080) (277 aa) fasta scores: E(): 3.6e-60, 58.42% id in 267 aa, and to Rhizobium loti hypothetical protein mll0509 SWALL:Q98MN1 (EMBL:AP002995) (295 aa) fasta scores: E(): 2.1e-21, 35.61% id in 278 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; hypothetical protein 1527657 3094140 BPSL1308 Burkholderia pseudomallei K96243 hypothetical protein YP_107932.1 1526860 D 272560 CDS YP_107933.1 53718947 3094141 complement(1528053..1528691) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0689 or rs01760 SWALL:Q8XRZ2 (EMBL:AL646080) (212 aa) fasta scores: E(): 4.2e-61, 71.69% id in 212 aa, and to Rhizobium loti transcriptional regulator mll0013 SWALL:Q98NS0 (EMBL:AP002994) (216 aa) fasta scores: E(): 6.3e-30, 42.78% id in 201 aa; hypothetical protein 1528691 3094141 BPSL1309 Burkholderia pseudomallei K96243 hypothetical protein YP_107933.1 1528053 R 272560 CDS YP_107934.1 53718948 3094229 1528813..1530354 1 NC_006350.1 Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 6.7e-42, 36.41% id in 497 aa, to Rhizobium loti transcriptional regulator mlr6174 SWALL:Q98A34 (EMBL:AP003008) (489 aa) fasta scores: E(): 7.1e-51, 39.6% id in 500 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5431 SWALL:Q9HTD5 (EMBL:AE004955) (491 aa) fasta scores: E(): 5.4e-50, 42.88% id in 499 aa; GntR family transcriptional regulator 1530354 3094229 BPSL1310 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_107934.1 1528813 D 272560 CDS YP_107935.1 53718949 3094230 complement(1530602..1531096) 1 NC_006350.1 Similar to Pseudomonas putida bkd operon transcriptional regulator BkdR SWALL:BKDR_PSEPU (SWALL:P42179) (161 aa) fasta scores: E(): 2e-12, 30.92% id in 152 aa, to Ralstonia solanacearum probable transcription regulator protein rsc2801 or rs00304 SWALL:Q8XVM9 (EMBL:AL646071) (158 aa) fasta scores: E(): 1.6e-18, 39.61% id in 154 aa, and to Rhizobium loti transcription regulator protein msi248 SWALL:CAD31280 (EMBL:AL672114) (151 aa) fasta scores: E(): 9e-17, 42.46% id in 146 aa; AsnC family transcriptional regulator 1531096 3094230 BPSL1311 Burkholderia pseudomallei K96243 AsnC family transcriptional regulator YP_107935.1 1530602 R 272560 CDS YP_107936.1 53718950 3091988 1531255..1533156 1 NC_006350.1 Similar to Escherichia coli glucosamine--fructose-6-phosphate aminotransferase [isomerizing] GlmS or b3729 SWALL:GLMS_ECOLI (SWALL:P17169) (608 aa) fasta scores: E(): 6.3e-89, 48.27% id in 638 aa, and to Ralstonia solanacearum glucosamine--fructose-6-phosphate aminotransferase [isomerizing] rsc0178 or rs00609 SWALL:GLMS_RALSO (SWALL:Q8Y303) (611 aa) fasta scores: E(): 8e-118, 60.25% id in 639 aa; glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2 1533156 glmS2 3091988 glmS2 Burkholderia pseudomallei K96243 glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2 YP_107936.1 1531255 D 272560 CDS YP_107937.1 53718951 3093744 complement(1533366..1534697) 1 NC_006350.1 Similar to Anabaena sp. hypothetical protein all1106 SWALL:Q8YXV3 (EMBL:AP003584) (475 aa) fasta scores: E(): 4.6e-42, 38.52% id in 462 aa, and to Streptomyces antibioticus dioxygenase SimC5 SWALL:Q9AMI1 (EMBL:AF324838) (456 aa) fasta scores: E(): 9.2e-42, 37.68% id in 467 aa; dioxygenase 1534697 3093744 BPSL1313 Burkholderia pseudomallei K96243 dioxygenase YP_107937.1 1533366 R 272560 CDS YP_107938.1 53718952 3093745 complement(1534719..1535423) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3765 SWALL:Q9HXN0 (EMBL:AE004795) (194 aa) fasta scores: E(): 9.9e-27, 56.1% id in 221 aa, and to Caulobacter crescentus hypothetical protein cc2024 SWALL:Q9A6R0 (EMBL:AE005875) (186 aa) fasta scores: E(): 1.6e-22, 44.39% id in 223 aa. Note: This CDS contains an internal region that has no similarities with the database matches, from residue 75 to residue 111; hypothetical protein 1535423 3093745 BPSL1314 Burkholderia pseudomallei K96243 hypothetical protein YP_107938.1 1534719 R 272560 CDS YP_107939.1 53718953 3091704 complement(1535587..1536486) 1 NC_006350.1 Similar to, although shorter in its N-terminal region than Agrobacterium tumefaciens transcriptional regulator, LysR family atu4367 or agr_l_999 SWALL:Q8U7T2 (EMBL:AE009365) (345 aa) fasta scores: E(): 2.2e-93, 75.25% id in 299 aa, and similar in its full length to Pseudomonas aeruginosa probable transcriptional regulator pa2877 SWALL:Q9HZX0 (EMBL:AE004714) (297 aa) fasta scores: E(): 2.3e-72, 61.74% id in 298 aa; LysR family transcriptional regulator 1536486 3091704 BPSL1315 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107939.1 1535587 R 272560 CDS YP_107940.1 53718954 3091705 1536737..1537507 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa2918 SWALL:Q9HZS9 (EMBL:AE004718) (257 aa) fasta scores: E(): 2.1e-76, 83.26% id in 257 aa, and to Rhizobium loti probable dehydrogenase/reductase mlr1583 SWALL:Q98K90 (EMBL:AP002997) (243 aa) fasta scores: E(): 1.5e-24, 40.23% id in 251 aa; short chain dehydrogenase 1537507 3091705 BPSL1316 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_107940.1 1536737 D 272560 CDS YP_107941.1 53718955 3093833 complement(1537725..1539116) 1 NC_006350.1 Similar to Ralstonia solanacearum lipoprotein transmembrane rsp0124 or rs02998 SWALL:Q8XTI4 (EMBL:AL646076) (276 aa) fasta scores: E(): 6.3e-37, 71.27% id in 282 aa, and to Xanthomonas axonopodis hypothetical protein xac0677 SWALL:AAM35566 (EMBL:AE011696) (271 aa) fasta scores: E(): 9.9e-12, 40.49% id in 284 aa. Note: this CDS is longer in its C-terminal region than most of its database matches and the region rich in Ala, Pro, Ser adn Thr amino acids residues has limited similarities with the database matches; lipoprotein 1539116 3093833 BPSL1317 Burkholderia pseudomallei K96243 lipoprotein YP_107941.1 1537725 R 272560 CDS YP_107942.1 53718956 3093834 complement(1539500..1539907) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1837 SWALL:Q9I2Q8 (EMBL:AE004609) (165 aa) fasta scores: E(): 4.8e-10, 42.27% id in 123 aa, and to Caulobacter crescentus hypothetical protein cc1120 SWALL:Q9A974 (EMBL:AE005790) (168 aa) fasta scores: E(): 4.6e-09, 38.58% id in 127 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 1539907 3093834 BPSL1318 Burkholderia pseudomallei K96243 hypothetical protein YP_107942.1 1539500 R 272560 CDS YP_107943.1 53718957 3094334 complement(1539904..1541721) 1 NC_006350.1 Similar to Ralstonia solanacearum probable sulfite reductase oxidoreductase CysI2 or rsc1862 or rs03422 SWALL:Q8XYA0 (EMBL:AL646067) (577 aa) fasta scores: E(): 4.4e-50, 51.78% id in 616 aa, and to Phormidium laminosum ferredoxin--nitrite reductase NirA or Nir SWALL:NIR_PHOLA (SWALL:Q51879) (510 aa) fasta scores: E(): 6.6e-10, 26.8% id in 567 aa. Note: The region between residues 80 and 105 presents very low or none similarities with the database matches; nitrite/sulfite reductase 1541721 3094334 BPSL1319 Burkholderia pseudomallei K96243 nitrite/sulfite reductase YP_107943.1 1539904 R 272560 CDS YP_107944.1 53718958 3094335 1542263..1542457 1 NC_006350.1 Very low similarity to Ralstonia solanacearum probable transmembrane protein rsc0366 or rs03334 SWALL:Q8Y2H0 (EMBL:AL646058) (70 aa) fasta scores: E(): 0.0019, 42% id in 50 aa; hypothetical protein 1542457 3094335 BPSL1320 Burkholderia pseudomallei K96243 hypothetical protein YP_107944.1 1542263 D 272560 CDS YP_107945.1 53718959 3094070 complement(1542534..1544009) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4132 SWALL:Q9HWP9 (EMBL:AE004829) (471 aa) fasta scores: E(): 9.9e-93, 55.16% id in 484 aa, and to Salmonella typhimurium regulatory protein, GntR family YdcR or stm1598 SWALL:Q8ZPC8 (EMBL:AE008770) (474 aa) fasta scores: E(): 6.7e-69, 47.21% id in 485 aa; GntR family transcriptional regulator 1544009 3094070 BPSL1321 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_107945.1 1542534 R 272560 CDS YP_107946.1 53718960 3094071 complement(1544714..1545115) 1 NC_006350.1 Similar to Rhizobium loti small heat shock protein mlr4721 SWALL:Q98DG0 (EMBL:AP003004) (159 aa) fasta scores: E(): 9.2e-11, 40.15% id in 132 aa, and to Deinococcus radiodurans heat shock protein, Hsp20 family dr1114 SWALL:Q9RVB5 (EMBL:AE001961) (182 aa) fasta scores: E(): 1.3e-07, 32.45% id in 114 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches. It is also similar to BPSL2917 (140 aa) fasta scores: E(): 9.5e-27, 57.576% identity in 132 aa overlap; heat shock protein 1545115 3094071 BPSL1322 Burkholderia pseudomallei K96243 heat shock protein YP_107946.1 1544714 R 272560 CDS YP_107947.1 53718961 3094350 complement(1545147..1545584) 1 NC_006350.1 Similar to Thermotoga maritima heat shock protein, class I tm0374 SWALL:Q9WYK7 (EMBL:AE001717) (147 aa) fasta scores: E(): 1e-11, 34.78% id in 138 aa, and to Chlamydomonas reinhardtii chloroplast heat shock 22 kDa protein SWALL:HS2C_CHLRE (SWALL:P12811) (157 aa) fasta scores: E(): 2.4e-09, 34.69% id in 147 aa. Note: Presents also similarity to BPSL2918 (181 aa) fasta scors: E(): 1.6e-32, 59.333% identity in 150 aa overlap; heat shock protein 1545584 3094350 BPSL1323 Burkholderia pseudomallei K96243 heat shock protein YP_107947.1 1545147 R 272560 CDS YP_107948.1 53718962 3094351 1545977..1546300 1 NC_006350.1 Similar to Pseudomonas putida hypothetical protein SWALL:O68643 (EMBL:AF052749) (109 aa) fasta scores: E(): 2.2e-18, 48.57% id in 105 aa, and to Salmonella typhimurium cytoplasmic protein stm1261 SWALL:Q8ZPY1 (EMBL:AE008755) (108 aa) fasta scores: E(): 2.4e-19, 47.17% id in 106 aa; hypothetical protein 1546300 3094351 BPSL1323a Burkholderia pseudomallei K96243 hypothetical protein YP_107948.1 1545977 D 272560 CDS YP_107949.1 53718963 3093468 1547220..1549085 1 NC_006350.1 GTP; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 1549085 pckG 3093468 pckG Burkholderia pseudomallei K96243 phosphoenolpyruvate carboxykinase YP_107949.1 1547220 D 272560 CDS YP_107950.1 53718964 3094011 1549366..1550298 1 NC_006350.1 Similar to Streptomyces coelicolor 3-hydroxyacyl-CoA dehydrogenase sco6297 or scbac8d1.10C SWALL:Q93RX5 (EMBL:AL591084) (318 aa) fasta scores: E(): 2e-47, 45.65% id in 311 aa, and to Bacillus subtilis probable 3-hydroxybutyryl-CoA dehydrogenase MmgB SWALL:HBD_BACSU (SWALL:P45856) (287 aa) fasta scores: E(): 2e-12, 32.14% id in 224 aa; 3-hydroxyacyl-CoA dehydrogenase 1550298 3094011 BPSL1325 Burkholderia pseudomallei K96243 3-hydroxyacyl-CoA dehydrogenase YP_107950.1 1549366 D 272560 CDS YP_107951.1 53718965 3094012 complement(1550869..1551717) 1 NC_006350.1 Similar to Burkholderia cepacia 2,2-dialkylglycine decarboxylase repressor protein DgdR SWALL:DGDR_BURCE (SWALL:P16931) (293 aa) fasta scores: E(): 3.3e-22, 35.71% id in 252 aa, and to Streptomyces coelicolor LysR-type transcriptional regulator sco6555 or sc4b5.05C SWALL:Q9ZBW3 (EMBL:AL034443) (292 aa) fasta scores: E(): 2e-33, 43.32% id in 277 aa; LysR family transcriptional regulator 1551717 3094012 BPSL1326 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_107951.1 1550869 R 272560 CDS YP_107952.1 53718966 3091661 1551987..1552382 1 NC_006350.1 Similar to Pseudomonas putida malonate transporter MdcL SWALL:Q9Z446 (EMBL:AB017138) (163 aa) fasta scores: E(): 5.7e-27, 66.15% id in 130 aa, and to Acinetobacter calcoaceticus malonate carrier protein MdcL SWALL:Q9RGM5 (EMBL:AF121266) (133 aa) fasta scores: E(): 3.3e-19, 51.9% id in 131 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; malonate transport-related system membrane protein 1552382 3091661 BPSL1327 Burkholderia pseudomallei K96243 malonate transport-related system membrane protein YP_107952.1 1551987 D 272560 CDS YP_107953.1 53718967 3091662 1552405..1553163 1 NC_006350.1 Similar to Pseudomonas putida malonate transporter MdcM SWALL:Q9Z445 (EMBL:AB017138) (254 aa) fasta scores: E(): 1.6e-59, 72.51% id in 251 aa, and to Malonomonas rubra MadM SWALL:O06932 (EMBL:U87980) (255 aa) fasta scores: E(): 2.3e-48, 61.53% id in 247 aa; malonate transport-related system membrane protein 1553163 3091662 BPSL1328 Burkholderia pseudomallei K96243 malonate transport-related system membrane protein YP_107953.1 1552405 D 272560 CDS YP_107954.1 53718968 3094323 1553456..1555102 1 NC_006350.1 Similar to Xanthomonas campestris alpha subunit of malonate decarboxylase xcc3609 SWALL:AAM42879 (EMBL:AE012482) (548 aa) fasta scores: E(): 2.1e-149, 69.78% id in 546 aa, and to Burkholderia cepacia malonate decarboxylase alpha-subunit MdcA SWALL:Q93L22 (EMBL:AF029344) (560 aa) fasta scores: E(): 3.2e-148, 69.55% id in 555 aa; malonate decarboxylase subunit alpha 1555102 3094323 BPSL1329 Burkholderia pseudomallei K96243 malonate decarboxylase subunit alpha YP_107954.1 1553456 D 272560 CDS YP_107955.1 53718969 3094324 1555116..1555433 1 NC_006350.1 acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta 1555433 3094324 BPSL1330 Burkholderia pseudomallei K96243 malonate decarboxylase subunit delta YP_107955.1 1555116 D 272560 CDS YP_107956.1 53718970 3092768 1555430..1556377 1 NC_006350.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 1556377 3092768 BPSL1331 Burkholderia pseudomallei K96243 malonate decarboxylase subunit beta YP_107956.1 1555430 D 272560 CDS YP_107957.1 53718971 3092769 1556364..1557089 1 NC_006350.1 Similar to Xanthomonas axonopodis malonate decarboxylase gamma subunit xac0563 SWALL:AAM35452 (EMBL:AE011683) (234 aa) fasta scores: E(): 2.1e-27, 44.63% id in 233 aa, and to Burkholderia cepacia malonate decarboxylase gamma-subunit MdcE SWALL:Q93L25 (EMBL:AF029344) (233 aa) fasta scores: E(): 2.8e-24, 42.6% id in 230 aa; malonate decarboxylase subunit gamma 1557089 3092769 BPSL1332 Burkholderia pseudomallei K96243 malonate decarboxylase subunit gamma YP_107957.1 1556364 D 272560 CDS YP_107958.2 161723206 3094671 1557064..1557990 1 NC_006350.1 catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 1557990 3094671 BPSL1333 Burkholderia pseudomallei K96243 phosphoribosyl-dephospho-CoA transferase YP_107958.2 1557064 D 272560 CDS YP_107959.1 53718973 3094672 1558572..1559342 1 NC_006350.1 Possible pseudogene. Similar to the C-terminal region of Escherichia coli 2--(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase CitG or b0613 SWALL:CITG_ECOLI (SWALL:P77231) (292 aa) fasta scores: E(): 1.7e-15, 34.36% id in 259 aa, and to Xanthomonas campestris CitG protein or xcc3614 SWALL:AAM42884 (EMBL:AE012482) (279 aa) fasta scores: E(): 1.3e-29, 46.72% id in 244 aa. Similarity to orthologues extends beyond the predicted translational start site, however extended CDS lacks appropriate translational start. Upstream similarity ends at a repeat region; coenzyme-A synthase 1559342 3094672 BPSL1334 Burkholderia pseudomallei K96243 coenzyme-A synthase YP_107959.1 1558572 D 272560 CDS YP_107960.1 53718974 3094721 1559339..1560277 1 NC_006350.1 Similar to Escherichia coli malonyl CoA-acyl carrier protein transacylase FabD or TfpA or b1092 SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 2.6e-14, 29.66% id in 300 aa, and to Xanthomonas campestris malonyl CoA-ACP transacylase MdcH or xcc3615 SWALL:AAM42885 (EMBL:AE012482) (306 aa) fasta scores: E(): 3.1e-40, 48.36% id in 306 aa, and to; ACP S-malonyltransferase 1560277 3094721 BPSL1335 Burkholderia pseudomallei K96243 ACP S-malonyltransferase YP_107960.1 1559339 D 272560 CDS YP_107961.1 53718975 3094722 1560371..1560916 1 NC_006350.1 Similar to Ralstonia solanacearum endonuclease rsc2452 or rs01154 SWALL:Q8XWM2 (EMBL:AL646070) (189 aa) fasta scores: E(): 3.8e-06, 32.16% id in 171 aa, and to the plasmid borne Escherichia coli, and Salmonella typhimurium endonuclease Nuc SWALL:Q46707 (EMBL:U09868) (177 aa) fasta scores: E(): 1.1e-05, 28.47% id in 151 aa; hypothetical protein 1560916 3094722 BPSL1336 Burkholderia pseudomallei K96243 hypothetical protein YP_107961.1 1560371 D 272560 CDS YP_107962.1 53718976 3094591 1561322..1562236 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0795 or rs01912 SWALL:Q8XRN6 (EMBL:AL646080) (290 aa) fasta scores: E(): 1.3e-30, 37.63% id in 279 aa, and to Pseudomonas aeruginosa hypothetical protein pa1291 SWALL:Q9I453 (EMBL:AE004558) (279 aa) fasta scores: E(): 9.8e-27, 39.03% id in 269 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 1562236 3094591 BPSL1337 Burkholderia pseudomallei K96243 hypothetical protein YP_107962.1 1561322 D 272560 CDS YP_107963.1 53718977 3094592 1562684..1563313 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0129 or rs00999 SWALL:Q8Y352 (EMBL:AL646057) (202 aa) fasta scores: E(): 2.1e-39, 58.09% id in 210 aa, and to Ralstonia solanacearum glutathione S-transferase rsc2721 or rs00001 SWALL:Q8XVV6 (EMBL:AL646071) (202 aa) fasta scores: E(): 1.3e-10, 31.1% id in 209 aa; glutathione S-transferase-like protein 1563313 3094592 BPSL1338 Burkholderia pseudomallei K96243 glutathione S-transferase-like protein YP_107963.1 1562684 D 272560 CDS YP_107964.1 53718978 3094767 complement(1563720..1565207) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 proline/betaine transporter ProP or b4111 or z5713 or ecs5093 SWALL:PROP_ECOLI (SWALL:P30848) (500 aa) fasta scores: E(): 3.7e-94, 52.62% id in 458 aa, and to Streptomyces coelicolor integral membrane transport protein sco2336 or scc53.27 SWALL:Q9KXI4 (EMBL:AL357591) (462 aa) fasta scores: E(): 1.5e-111, 65.8% id in 465 aa; proline/betaine transporter 1565207 3094767 BPSL1339 Burkholderia pseudomallei K96243 proline/betaine transporter YP_107964.1 1563720 R 272560 CDS YP_107965.1 53718979 3094768 1565742..1566074 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp1275 or rs05320 SWALL:Q8XQF2 (EMBL:AL646083) (110 aa) fasta scores: E(): 3.7e-31, 79.8% id in 104 aa, and to Xanthomonas campestris hypothetical protein xcc2880 SWALL:AAM42152 (EMBL:AE012401) (111 aa) fasta scores: E(): 1.8e-22, 66% id in 100 aa; hypothetical protein 1566074 3094768 BPSL1340 Burkholderia pseudomallei K96243 hypothetical protein YP_107965.1 1565742 D 272560 CDS YP_107966.1 53718980 3092205 complement(1566419..1567141) 1 NC_006350.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1567141 dnaQ 3092205 dnaQ Burkholderia pseudomallei K96243 DNA polymerase III subunit epsilon YP_107966.1 1566419 R 272560 CDS YP_107967.1 53718981 3092549 complement(1567199..1567645) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ribonuclease HI RnhA or Rnh or DasF or HerA or sdrA or b0214 or z0239 or ecs0210 SWALL:RNH_ECOLI (SWALL:P00647) (155 aa) fasta scores: E(): 2.2e-36, 65.44% id in 136 aa, and to Caulobacter crescentus ribonuclease H cc3365 SWALL:RNH_CAUCR (SWALL:Q9A341) (149 aa) fasta scores: E(): 2.4e-42, 75.18% id in 137 aa; ribonuclease HI 1567645 rnhA 3092549 rnhA Burkholderia pseudomallei K96243 ribonuclease HI YP_107967.1 1567199 R 272560 CDS YP_107968.1 53718982 3093102 complement(1567642..1568454) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1514 or rs03790 SWALL:Q8XZ90 (EMBL:AL646065) (257 aa) fasta scores: E(): 2e-52, 57.56% id in 238 aa, and to Neisseria meningitidis hypothetical protein nmb1296 SWALL:Q9JZ46 (EMBL:AE002478) (221 aa) fasta scores: E(): 4.1e-15, 33.62% id in 232 aa; hypothetical protein 1568454 3093102 BPSL1343 Burkholderia pseudomallei K96243 hypothetical protein YP_107968.1 1567642 R 272560 CDS YP_107969.1 53718983 3093103 1568475..1569281 1 NC_006350.1 Similar to Ralstonia solanacearum hydroxyacylglutathione hydrolase rsc1515 or rs03789 SWALL:Q8XZ89 (EMBL:AL646065) (284 aa) fasta scores: E(): 1.6e-51, 55.68% id in 264 aa, and to Synechocystis sp. probable hydroxyacylglutathione hydrolase sll1019 SWALL:GLO2_SYNY3 (SWALL:P72933) (257 aa) fasta scores: E(): 6.9e-32, 43.72% id in 263 aa; gultathione hydrolase 1569281 3093103 BPSL1344 Burkholderia pseudomallei K96243 gultathione hydrolase YP_107969.1 1568475 D 272560 CDS YP_107970.1 53718984 3091560 1569365..1571026 1 NC_006350.1 Similar to Escherichia coli membrane-bound lytic murein transglycosylase D precursor MltD or DniR or b0211 SWALL:MLTD_ECOLI (SWALL:P23931) (452 aa) fasta scores: E(): 5.4e-35, 34.26% id in 467 aa, and to Ralstonia solanacearum membrane-bound lytic murein transglycosylase-like lipoprotein rsc1516 or rs03787 SWALL:Q8XZ88 (EMBL:AL646065) (451 aa) fasta scores: E(): 9.5e-99, 62.52% id in 451 aa; exported transglycosylase 1571026 3091560 BPSL1345 Burkholderia pseudomallei K96243 exported transglycosylase YP_107970.1 1569365 D 272560 CDS YP_107971.1 53718985 3091561 1571107..1572399 1 NC_006350.1 Similar to Archaeoglobus fulgidus hypothetical protein af0907 SWALL:O29355 (EMBL:AE001041) (419 aa) fasta scores: E(): 4.2e-27, 31.15% id in 398 aa, and to Escherichia coli bicyclomycin resistance protein Bcr or BicA or BicR or Sur or SuxA or b2182 SWALL:BCR_ECOLI (SWALL:P28246) (396 aa) fasta scores: E(): 4.6e-07, 23.78% id in 391 aa; hypothetical protein 1572399 3091561 BPSL1346 Burkholderia pseudomallei K96243 hypothetical protein YP_107971.1 1571107 D 272560 CDS YP_107972.1 53718986 3093588 complement(1572506..1573639) 1 NC_006350.1 hypothetical protein 1573639 3093588 BPSL1347 Burkholderia pseudomallei K96243 hypothetical protein YP_107972.1 1572506 R 272560 CDS YP_107973.1 53718987 3093589 1573867..1574889 1 NC_006350.1 Similar to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 1.4e-35, 36.74% id in 332 aa, and to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 1.1e-25, 31.09% id in 328 aa; AraC family transcriptional regulator 1574889 3093589 BPSL1348 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_107973.1 1573867 D 272560 CDS YP_107974.1 53718988 3092517 1575304..1576449 1 NC_006350.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1576449 carA 3092517 carA Burkholderia pseudomallei K96243 carbamoyl phosphate synthase small subunit YP_107974.1 1575304 D 272560 CDS YP_107975.1 53718989 3094569 1576481..1577143 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4757 SWALL:YBF7_PSEAE (SWALL:P38102) (216 aa) fasta scores: E(): 8.6e-56, 71.16% id in 215 aa, and to Escherichia coli hypothetical protein YeaS or b1798 SWALL:YEAS_ECOLI (SWALL:P76249) (212 aa) fasta scores: E(): 5.2e-34, 46.04% id in 215 aa; leucine export protein LeuE 1577143 3094569 BPSL1350 Burkholderia pseudomallei K96243 leucine export protein LeuE YP_107975.1 1576481 D 272560 CDS YP_107976.1 53718990 3092518 1577195..1580449 1 NC_006350.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1580449 carB 3092518 carB Burkholderia pseudomallei K96243 carbamoyl phosphate synthase large subunit YP_107976.1 1577195 D 272560 CDS YP_107977.1 53718991 3093169 1580568..1581044 1 NC_006350.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1581044 greA 3093169 greA Burkholderia pseudomallei K96243 transcription elongation factor GreA YP_107977.1 1580568 D 272560 CDS YP_107978.1 53718992 3094570 1581044..1581547 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1523 or rs03781 SWALL:Q8XZ81 (EMBL:AL646065) (155 aa) fasta scores: E(): 3.5e-30, 61.74% id in 149 aa; hypothetical protein 1581547 3094570 BPSL1353 Burkholderia pseudomallei K96243 hypothetical protein YP_107978.1 1581044 D 272560 CDS YP_107979.1 53718993 3092734 complement(1581618..1582172) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1524 or rs03780 SWALL:Q8XZ80 (EMBL:AL646065) (165 aa) fasta scores: E(): 4.7e-20, 59.77% id in 179 aa, and to the N-terminal region of Neisseria meningitidis hypothetical protein nma1009 SWALL:Q9JV39 (EMBL:AL162754) (94 aa) fasta scores: E(): 3.7e-12, 50.56% id in 89 aa; hypothetical protein 1582172 3092734 BPSL1354 Burkholderia pseudomallei K96243 hypothetical protein YP_107979.1 1581618 R 272560 CDS YP_107980.1 53718994 3092735 1582366..1583028 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ribosomal RNA large subunit methyltransferase J RrmJ or FtsJ or MrsF or b3179 or z4541 or ecs4058 SWALL:RRMJ_ECOLI (SWALL:P28692) (209 aa) fasta scores: E(): 9.2e-16, 43.96% id in 207 aa, and to Ralstonia solanacearum probable ribosomal RNA large subunit methyltransferase J rsc1525 or rs04752 SWALL:Q8XZ79 (EMBL:AL646065) (221 aa) fasta scores: E(): 3e-64, 78.02% id in 223 aa; ribosomal RNA large subunit methyltransferase 1583028 3092735 BPSL1355 Burkholderia pseudomallei K96243 ribosomal RNA large subunit methyltransferase YP_107980.1 1582366 D 272560 CDS YP_107981.1 53718995 3093403 1583196..1585082 1 NC_006350.1 Similar to Escherichia coli cell division protein HflB or FtsH or MrsC or TolZ or b3178 SWALL:FTSH_ECOLI (SWALL:P28691) (644 aa) fasta scores: E(): 2.3e-120, 58% id in 631 aa, and to Ralstonia solanacearum probable ATP-dependent zinc metallopeptidase rsc1526 or rs03778 SWALL:Q8XZ78 (EMBL:AL646065) (628 aa) fasta scores: E(): 2.4e-178, 82.06% id in 630 aa; FtsH endopeptidase 1585082 ftsH 3093403 ftsH Burkholderia pseudomallei K96243 FtsH endopeptidase YP_107981.1 1583196 D 272560 CDS YP_107982.1 53718996 3092153 1585195..1586085 1 NC_006350.1 Similar to Escherichia coli dihydropteroate synthase FolP or DhpS or b3177 SWALL:DHPS_ECOLI (SWALL:P26282) (282 aa) fasta scores: E(): 2.4e-41, 48.9% id in 274 aa, and to Haemophilus influenzae dihydropteroate synthase FolP SWALL:Q93T09 (EMBL:AF378241) (273 aa) fasta scores: E(): 3.1e-44, 50.74% id in 270 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; dihydropteroate synthase 1586085 folP 3092153 folP Burkholderia pseudomallei K96243 dihydropteroate synthase YP_107982.1 1585195 D 272560 CDS YP_107983.1 53718997 3093482 1586111..1587469 1 NC_006350.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1587469 glmM 3093482 glmM Burkholderia pseudomallei K96243 phosphoglucosamine mutase YP_107983.1 1586111 D 272560 CDS YP_107984.1 53718998 3093141 1587905..1588933 1 NC_006350.1 Similar to Escherichia coli phosphate-binding periplasmic protein precursor PstS or PhoS or b3728 SWALL:PSTS_ECOLI (SWALL:P06128) (346 aa) fasta scores: E(): 2.5e-86, 63.26% id in 343 aa, and to Ralstonia solanacearum probable phosphate-binding periplasmic rsc1529 or rs03775 SWALL:Q8XZ75 (EMBL:AL646065) (343 aa) fasta scores: E(): 2.2e-97, 71.84% id in 341 aa; phosphate transport system, substrate-binding exported periplasmic protein 1588933 pstS 3093141 pstS Burkholderia pseudomallei K96243 phosphate transport system, substrate-binding exported periplasmic protein YP_107984.1 1587905 D 272560 CDS YP_107985.1 53718999 3092860 1589040..1590026 1 NC_006350.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 1590026 pstC 3092860 pstC Burkholderia pseudomallei K96243 phosphate transporter permease subunit PstC YP_107985.1 1589040 D 272560 CDS YP_107986.2 161723205 3092903 1590023..1590916 1 NC_006350.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 1590916 pstA 3092903 pstA Burkholderia pseudomallei K96243 phosphate transporter permease subunit PtsA YP_107986.2 1590023 D 272560 CDS YP_107987.1 53719001 3092904 1590932..1591780 1 NC_006350.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1591780 pstB 3092904 pstB Burkholderia pseudomallei K96243 phosphate transporter ATP-binding protein YP_107987.1 1590932 D 272560 CDS YP_107988.1 53719002 3093483 1591800..1592504 1 NC_006350.1 Similar to Escherichia coli phosphate transport system protein PhoU or NmpA or b3724 SWALL:PHOU_ECOLI (SWALL:P07656) (241 aa) fasta scores: E(): 7.3e-32, 46.28% id in 229 aa, and to Ralstonia solanacearum probable phosphate transport system protein rsc1533 or rs03771 SWALL:Q8XZ71 (EMBL:AL646065) (235 aa) fasta scores: E(): 6.6e-53, 67.09% id in 231 aa; phosphate transport system-like protein 1592504 3093483 BPSL1363 Burkholderia pseudomallei K96243 phosphate transport system-like protein YP_107988.1 1591800 D 272560 CDS YP_107989.1 53719003 3094079 1592533..1593234 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 phosphate regulon transcriptional regulatory protein PhoB or b0399 or z0497 or ecs0449 SWALL:PHOB_ECOLI (SWALL:P08402) (229 aa) fasta scores: E(): 3.8e-51, 57.82% id in 230 aa, and to Ralstonia solanacearum probable phosphate regulon two-component response regulator transcription regulator protein rsc1534 or rs03769 SWALL:Q8XZ70 (EMBL:AL646065) (237 aa) fasta scores: E(): 1.6e-75, 83.33% id in 234 aa; phosphate regulon two-component system response regulator 1593234 phoB 3094079 phoB Burkholderia pseudomallei K96243 phosphate regulon two-component system response regulator YP_107989.1 1592533 D 272560 CDS YP_107990.1 53719004 3093459 1593304..1594614 1 NC_006350.1 Similar to Escherichia coli phosphate regulon sensor protein PhoR or NmpB or b0400 SWALL:PHOR_ECOLI (SWALL:P08400) (431 aa) fasta scores: E(): 1.5e-50, 36.83% id in 429 aa, and to Ralstonia solanacearum probable phosphate regulon two-component sensor kinase transcription regulator protein rsc1535 or rs03768 SWALL:Q8XZ69 (EMBL:AL646065) (443 aa) fasta scores: E(): 1.5e-104, 61.89% id in 433 aa; phosphate regulon two-component system sensor kinase 1594614 3093459 BPSL1365 Burkholderia pseudomallei K96243 phosphate regulon two-component system sensor kinase YP_107990.1 1593304 D 272560 CDS YP_107991.2 161723204 3093143 complement(1594813..1597056) 1 NC_006350.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1597056 ppk 3093143 ppk Burkholderia pseudomallei K96243 polyphosphate kinase YP_107991.2 1594813 R 272560 CDS YP_107992.1 53719006 3093460 1597104..1598663 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 exopolyphosphatase Ppx or b2502 or z3765 or ecs3364 SWALL:PPX_ECOLI (SWALL:P29014) (512 aa) fasta scores: E(): 1.7e-60, 37.7% id in 496 aa, and to Ralstonia solanacearum probable exopolyphosphatase rsc1537 or rs03765 SWALL:Q8XZ67 (EMBL:AL646065) (527 aa) fasta scores: E(): 5.1e-134, 67.64% id in 513 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; exopolyphosphatase 1598663 3093460 BPSL1367 Burkholderia pseudomallei K96243 exopolyphosphatase YP_107992.1 1597104 D 272560 CDS YP_107993.1 53719007 3094861 complement(1598976..1599869) 1 NC_006350.1 hypothetical protein 1599869 3094861 BPSL1368 Burkholderia pseudomallei K96243 hypothetical protein YP_107993.1 1598976 R 272560 CDS YP_107994.1 53719008 3094862 1599935..1601008 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein mll6491 SWALL:Q989C0 (EMBL:AP003009) (328 aa) fasta scores: E(): 1.2e-20, 32.48% id in 314 aa; hypothetical protein 1601008 3094862 BPSL1369 Burkholderia pseudomallei K96243 hypothetical protein YP_107994.1 1599935 D 272560 CDS YP_107995.1 53719009 3092501 1601034..1601699 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc3377 or rs02651 SWALL:Q8XU17 (EMBL:AL646075) (170 aa) fasta scores: E(): 2.1e-09, 41.2% id in 182 aa. Note: this CDS is longer in its N-terminal region than most of its few database matches; hypothetical protein 1601699 3092501 BPSL1370 Burkholderia pseudomallei K96243 hypothetical protein YP_107995.1 1601034 D 272560 CDS YP_107996.1 53719010 3092502 1601862..1602416 1 NC_006350.1 hypothetical protein 1602416 3092502 BPSL1371A Burkholderia pseudomallei K96243 hypothetical protein YP_107996.1 1601862 D 272560 CDS YP_107997.1 53719011 3094435 complement(1603053..1603313) 1 NC_006350.1 hypothetical protein 1603313 3094435 BPSL1372 Burkholderia pseudomallei K96243 hypothetical protein YP_107997.1 1603053 R 272560 CDS YP_107998.1 53719012 3094436 complement(1603310..1603720) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2888 or rs00212 SWALL:Q8XVE3 (EMBL:AL646072) (152 aa) fasta scores: E(): 4.4e-19, 44.03% id in 134 aa. Note: This CDS is shorter in its N-terminal region than its significant database match; hypothetical protein 1603720 3094436 BPSL1373 Burkholderia pseudomallei K96243 hypothetical protein YP_107998.1 1603310 R 272560 CDS YP_107999.1 53719013 3093970 1604281..1604742 1 NC_006350.1 Similar to Burkholderia thailandensis hypothetical protein SWALL:Q8VP92 (EMBL:AY063741) (153 aa) fasta scores: E(): 1.4e-53, 94.77% id in 153 aa, and to Ralstonia solanacearum probable hydrolase rsc1539 or rs03763 SWALL:Q8XZ65 (EMBL:AL646065) (157 aa) fasta scores: E(): 5.8e-27, 53.45% id in 159 aa; hydrolase 1604742 3093970 BPSL1374 Burkholderia pseudomallei K96243 hydrolase YP_107999.1 1604281 D 272560 CDS YP_108000.1 53719014 3093971 1604894..1605712 1 NC_006350.1 Similar to Burkholderia thailandensis hypothetical protein SWALL:Q8VP91 (EMBL:AY063741) (272 aa) fasta scores: E(): 1.5e-112, 98.89% id in 272 aa, and to Ralstonia solanacearum hypothetical protein rsc1538 or rs03764 SWALL:Q8XZ66 (EMBL:AL646065) (278 aa) fasta scores: E(): 7.1e-67, 65.7% id in 277 aa; hypothetical protein 1605712 3093971 BPSL1375 Burkholderia pseudomallei K96243 hypothetical protein YP_108000.1 1604894 D 272560 CDS YP_108001.1 53719015 3094812 complement(1606063..1606326) 1 NC_006350.1 hypothetical protein 1606326 3094812 BPSL1376 Burkholderia pseudomallei K96243 hypothetical protein YP_108001.1 1606063 R 272560 CDS YP_108002.1 53719016 3094813 1606401..1606592 1 NC_006350.1 lipoprotein 1606592 3094813 BPSL1377 Burkholderia pseudomallei K96243 lipoprotein YP_108002.1 1606401 D 272560 CDS YP_108003.1 53719017 3093285 complement(1606854..1608245) 1 NC_006350.1 Similar to Ralstonia solanacearum probable DNA-damage-inducible F transmembrane protein rsp0283 or rs03681 SWALL:Q8XT32 (EMBL:AL646077) (457 aa) fasta scores: E(): 6.8e-99, 61.35% id in 458 aa, and to Escherichia coli DNA-damage-inducible protein F DinF or b4044 SWALL:DINF_ECOLI (SWALL:P28303) (459 aa) fasta scores: E(): 2e-55, 42.99% id in 414 aa; membrane protein (DNA-damage-inducible protein) 1608245 3093285 BPSL1378 Burkholderia pseudomallei K96243 membrane protein (DNA-damage-inducible protein) YP_108003.1 1606854 R 272560 CDS YP_108004.1 53719018 3093286 complement(1608253..1608603) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1075 SWALL:Q9I4Q4 (EMBL:AE004539) (105 aa) fasta scores: E(): 1.1e-16, 54.25% id in 94 aa; hypothetical protein 1608603 3093286 BPSL1379 Burkholderia pseudomallei K96243 hypothetical protein YP_108004.1 1608253 R 272560 CDS YP_108005.1 53719019 3093550 complement(1608868..1610535) 1 NC_006350.1 Similar to Bacillus subtilis acetyl-coenzyme A synthetase AcsA SWALL:ACSA_BACSU (SWALL:P39062) (572 aa) fasta scores: E(): 5.7e-54, 34.63% id in 540 aa, and to Rhizobium loti acetyl-CoA synthetase mll6017 SWALL:Q98AG0 (EMBL:AP003008) (562 aa) fasta scores: E(): 8.3e-119, 55.51% id in 553 aa; acetyl-CoA synthetase 1610535 3093550 BPSL1380 Burkholderia pseudomallei K96243 acetyl-CoA synthetase YP_108005.1 1608868 R 272560 CDS YP_108006.1 53719020 3093551 complement(1610849..1611562) 1 NC_006350.1 Similar to Salmonella typhi possible lipoprotein sty3194 SWALL:Q8Z3Y0 (EMBL:AL627277) (250 aa) fasta scores: E(): 2.7e-27, 47.05% id in 221 aa, and to Pseudomonas aeruginosa lipoprotein NlpD/LppB homolog precursor pa3623 SWALL:NLPD_PSEAE (SWALL:P45682) (297 aa) fasta scores: E(): 1.1e-21, 43.98% id in 241 aa; peptidase 1611562 3093551 BPSL1381 Burkholderia pseudomallei K96243 peptidase YP_108006.1 1610849 R 272560 CDS YP_108007.1 53719021 3094293 complement(1611847..1612755) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1585 or rs03937 SWALL:Q8XZ21 (EMBL:AL646065) (312 aa) fasta scores: E(): 5.3e-59, 51.75% id in 313 aa, and to Rhizobium loti hypothetical protein mlr0411 SWALL:Q98MW4 (EMBL:AP002994) (294 aa) fasta scores: E(): 3.7e-12, 30.71% id in 306 aa; hypothetical protein 1612755 3094293 BPSL1382 Burkholderia pseudomallei K96243 hypothetical protein YP_108007.1 1611847 R 272560 CDS YP_108008.1 53719022 3094294 1613303..1614133 1 NC_006350.1 phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1614133 uppP 3094294 uppP Burkholderia pseudomallei K96243 undecaprenyl pyrophosphate phosphatase YP_108008.1 1613303 D 272560 CDS YP_108009.1 53719023 3094348 complement(1615048..1615761) 1 NC_006350.1 Low similarity to Pseudomonas aeruginosa hypothetical protein pa3908 SWALL:Q9HXA5 (EMBL:AE004808) (239 aa) fasta scores: E(): 6e-06, 24.46% id in 233 aa; hypothetical protein 1615761 3094348 BPSL1385 Burkholderia pseudomallei K96243 hypothetical protein YP_108009.1 1615048 R 272560 CDS YP_108010.1 53719024 3094349 complement(1615770..1616276) 1 NC_006350.1 Partially similar to Pseudomonas aeruginosa hypothetical protein pa3907 SWALL:Q9HXA6 (EMBL:AE004808) (261 aa) fasta scores: E(): 1.7e-05, 27.05% id in 170 aa. Note: 10 first residues overlap with the upstream CDS; hypothetical protein 1616276 3094349 BPSL1386 Burkholderia pseudomallei K96243 hypothetical protein YP_108010.1 1615770 R 272560 CDS YP_108011.1 53719025 3094370 complement(1616248..1616697) 1 NC_006350.1 Similar to the N-terminal part of Pseudomonas aeruginosa hypothetical protein pa3906 SWALL:Q9HXA7 (EMBL:AE004808) (127 aa) fasta scores: E(): 0.0096, 34.31% id in 102 aa. Note: Overlaps with the downstream CDS in 10 residues; hypothetical protein 1616697 3094370 BPSL1387 Burkholderia pseudomallei K96243 hypothetical protein YP_108011.1 1616248 R 272560 CDS YP_108012.1 53719026 3094371 complement(1616714..1617217) 1 NC_006350.1 Low similarity to Pseudomonas aeruginosa hypothetical protein pa3905 SWALL:Q9HXA8 (EMBL:AE004808) (175 aa) fasta scores: E(): 0.0056, 32.71% id in 107 aa; hypothetical protein 1617217 3094371 BPSL1388 Burkholderia pseudomallei K96243 hypothetical protein YP_108012.1 1616714 R 272560 CDS YP_108013.1 53719027 3091640 complement(1617923..1618318) 1 NC_006350.1 hypothetical protein 1618318 3091640 BPSL1390 Burkholderia pseudomallei K96243 hypothetical protein YP_108013.1 1617923 R 272560 CDS YP_108014.1 53719028 3094026 complement(1618835..1619068) 1 NC_006350.1 hypothetical protein 1619068 3094026 BPSL1392 Burkholderia pseudomallei K96243 hypothetical protein YP_108014.1 1618835 R 272560 CDS YP_108015.1 53719029 3093398 complement(1619144..1619650) 1 NC_006350.1 Similar to Streptomyces violaceus streptavidin V2 precursor SWALL:SAV2_STRVL (SWALL:Q53533) (183 aa) fasta scores: E(): 1e-07, 33.11% id in 154 aa, and to Streptomyces avidinii streptavidin precursor SWALL:SAV_STRAV (SWALL:P22629) (183 aa) fasta scores: E(): 4.6e-07, 30.48% id in 164 aa; exported avidin family protein 1619650 3093398 BPSL1393 Burkholderia pseudomallei K96243 exported avidin family protein YP_108015.1 1619144 R 272560 CDS YP_108016.1 53719030 3093399 complement(1620853..1621476) 1 NC_006350.1 Similar to the plasmid borne Pseudomonas putida nuclease SWALL:Q8VMF9 (EMBL:AJ344068) (185 aa) fasta scores: E(): 2.7e-30, 54.19% id in 155 aa, and to Escherichia coli, and Salmonella typhimurium endonuclease Nuc SWALL:Q46707 (EMBL:U09868) (177 aa) fasta scores: E(): 8e-28, 47.64% id in 170 aa; exported endonuclease 1621476 3093399 BPSL1394 Burkholderia pseudomallei K96243 exported endonuclease YP_108016.1 1620853 R 272560 CDS YP_108017.1 53719031 3094782 complement(1621671..1622822) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable acetylpolyamine aminohydrolase pa3774 SWALL:Q9HXM1 (EMBL:AE004796) (380 aa) fasta scores: E(): 2.2e-99, 66.12% id in 366 aa, and to Rhizobium loti hypothetical protein mlr7469 SWALL:Q985Y7 (EMBL:AP003011) (308 aa) fasta scores: E(): 6.8e-35, 39.86% id in 291 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; histone deacetylase 1622822 3094782 BPSL1395 Burkholderia pseudomallei K96243 histone deacetylase YP_108017.1 1621671 R 272560 CDS YP_108018.1 53719032 3094783 complement(1622837..1624030) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3773 SWALL:Q9HXM2 (EMBL:AE004796) (385 aa) fasta scores: E(): 2e-54, 49.73% id in 374 aa, and to Streptomyces coelicolor transmembrane efflux protein sco2545 or scc77.12 SWALL:Q9RDE6 (EMBL:AL136503) (449 aa) fasta scores: E(): 5.6e-12, 29.58% id in 382 aa; hypothetical protein 1624030 3094783 BPSL1396 Burkholderia pseudomallei K96243 hypothetical protein YP_108018.1 1622837 R 272560 CDS YP_108019.1 53719033 3094565 complement(1624054..1625121) 1 NC_006350.1 Similar to Ralstonia solanacearum porin signal peptide protein rsc2760 or rs00094 SWALL:Q8XVR9 (EMBL:AL646071) (353 aa) fasta scores: E(): 2e-21, 31.74% id in 356 aa, and to Neisseria gonorrhoeae major outer membrane protein P.IA precursor PorA SWALL:OMA_NEIGO (SWALL:P05430) (326 aa) fasta scores: E(): 4.8e-08, 27.58% id in 319 aa; porin signal peptide protein 1625121 3094565 BPSL1397 Burkholderia pseudomallei K96243 porin signal peptide protein YP_108019.1 1624054 R 272560 CDS YP_108020.1 53719034 3094566 1625452..1626600 1 NC_006350.1 C-terminal region is similar to Pseudomonas aeruginosa probable transcriptional regulator pa3771 SWALL:Q9HXM4 (EMBL:AE004796) (325 aa) fasta scores: E(): 2.4e-19, 29.81% id in 332 aa, and to the C-terminal region to Xanthomonas axonopodis two-component system regulatory protein xac0136 SWALL:AAM35028 (EMBL:AE011636) (210 aa) fasta scores: E(): 0.011, 30.35% id in 112 aa. Possible alternative translational start site; GerE family transcriptional regulator 1626600 3094566 BPSL1398 Burkholderia pseudomallei K96243 GerE family transcriptional regulator YP_108020.1 1625452 D 272560 CDS YP_108021.1 53719035 3093239 1626699..1627685 1 NC_006350.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 1627685 3093239 BPSL1399 Burkholderia pseudomallei K96243 2-dehydropantoate 2-reductase YP_108021.1 1626699 D 272560 CDS YP_108022.1 53719036 3093240 complement(1628075..1628524) 1 NC_006350.1 Similar to Rhizobium loti transcriptional regulator mll8302 SWALL:Q983J5 (EMBL:AP003013) (146 aa) fasta scores: E(): 1.7e-10, 35.2% id in 125 aa, and to Xanthomonas campestris transcriptional regulator MarR/EmrR family xcc0435 SWALL:AAM39753 (EMBL:AE012141) (162 aa) fasta scores: E(): 2.6e-10, 30.88% id in 136 aa, and weakly to Escherichia coli multiple antibiotic resistance protein MarR or SoxQ or CfxB or InaR or b1530 SWALL:MARR_ECOLI (SWALL:P27245) (144 aa) fasta scores: E(): 0.00063, 25.98% id in 127 aa; MarR family transcriptional regulator 1628524 3093240 BPSL1400 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_108022.1 1628075 R 272560 CDS YP_108023.1 53719037 3092186 complement(1628627..1629790) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1052 SWALL:Q9I4S2 (EMBL:AE004537) (381 aa) fasta scores: E(): 5.2e-50, 50.13% id in 377 aa, and to Bacillus subtilis glycerate kinase GlxK or S14A SWALL:GRK_BACSU (SWALL:P42100) (382 aa) fasta scores: E(): 1.1e-38, 40.1% id in 379 aa; kinase 1629790 3092186 BPSL1401 Burkholderia pseudomallei K96243 kinase YP_108023.1 1628627 R 272560 CDS YP_108024.1 53719038 3092748 1630243..1631592 1 NC_006350.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1631592 tig 3092748 tig Burkholderia pseudomallei K96243 trigger factor YP_108024.1 1630243 D 272560 CDS YP_108025.1 53719039 3094271 1631727..1632380 1 NC_006350.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1632380 clpP 3094271 clpP Burkholderia pseudomallei K96243 ATP-dependent Clp protease proteolytic subunit YP_108025.1 1631727 D 272560 CDS YP_108026.1 53719040 3093205 1632520..1633812 1 NC_006350.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1633812 clpX 3093205 clpX Burkholderia pseudomallei K96243 ATP-dependent protease ATP-binding subunit ClpX YP_108026.1 1632520 D 272560 CDS YP_108027.1 53719041 3092784 1634008..1636425 1 NC_006350.1 Similar to Escherichia coli ATP-dependent protease La Lon or CapR or Deg or Muc or LopA or b0439 SWALL:LON_ECOLI (SWALL:P08177) (784 aa) fasta scores: E(): 6.1e-180, 69.7% id in 779 aa, and to Ralstonia solanacearum probable ATP-dependent protease La protein rsc1713 or rs02903 SWALL:Q8XYP5 (EMBL:AL646066) (806 aa) fasta scores: E(): 0, 87.96% id in 806 aa; ATP-dependent protease 1636425 lon 3092784 lon Burkholderia pseudomallei K96243 ATP-dependent protease YP_108027.1 1634008 D 272560 CDS YP_108028.1 53719042 3092187 complement(1637455..1637784) 1 NC_006350.1 hypothetical protein 1637784 3092187 BPSL1406 Burkholderia pseudomallei K96243 hypothetical protein YP_108028.1 1637455 R 272560 CDS YP_108029.1 53719043 3094610 1637967..1638185 1 NC_006350.1 hypothetical protein 1638185 3094610 BPSL1406A Burkholderia pseudomallei K96243 hypothetical protein YP_108029.1 1637967 D 272560 CDS YP_108030.1 53719044 3094611 1638260..1638676 1 NC_006350.1 hypothetical protein 1638676 3094611 BPSL1407 Burkholderia pseudomallei K96243 hypothetical protein YP_108030.1 1638260 D 272560 CDS YP_108031.1 53719045 3092361 1639796..1640008 1 NC_006350.1 Very low similarity to the C-terminal region of Thermoanaerobacter tengcongensis hypothetical protein tte0299 SWALL:Q8RCV6 (EMBL:AE013003) (110 aa) fasta scores: E(): 0.53, 40.47% id in 42 aa; hypothetical protein 1640008 3092361 BPSL1409 Burkholderia pseudomallei K96243 hypothetical protein YP_108031.1 1639796 D 272560 CDS YP_108032.1 53719046 3094072 1640747..1642681 1 NC_006350.1 Similar to Escherichia coli peptidyl-prolyl cis-trans isomerase D PpiD or b0441 SWALL:PPID_ECOLI (SWALL:P77241) (623 aa) fasta scores: E(): 9.7e-16, 28.61% id in 650 aa, and to Ralstonia solanacearum probable peptidyl-prolyl cis-trans isomerase transmembrane protein rsc1715 or rs02886 SWALL:Q8XYP3 (EMBL:AL646066) (648 aa) fasta scores: E(): 7.9e-99, 46.59% id in 646 aa; peptidyl-prolyl cis-trans isomerase 1642681 3094072 BPSL1410 Burkholderia pseudomallei K96243 peptidyl-prolyl cis-trans isomerase YP_108032.1 1640747 D 272560 CDS YP_108033.1 53719047 3094073 complement(1643189..1643863) 1 NC_006350.1 Similar to Ralstonia solanacearum probable esterase signal peptide protein rsc1717 or rs02907 SWALL:Q8XYP1 (EMBL:AL646066) (216 aa) fasta scores: E(): 5.8e-41, 59.29% id in 199 aa, and to Escherichia coli acyl-CoA thioesterase I precursor TesA or ApeA or PldC or b0494 SWALL:TESA_ECOLI (SWALL:P29679) (208 aa) fasta scores: E(): 6.8e-21, 42.3% id in 182 aa; acyl-CoA thioesterase 1643863 3094073 BPSL1411 Burkholderia pseudomallei K96243 acyl-CoA thioesterase YP_108033.1 1643189 R 272560 CDS YP_108034.1 53719048 3094076 1643853..1644578 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1718 or rs02908 SWALL:Q8XYP0 (EMBL:AL646066) (236 aa) fasta scores: E(): 6.9e-47, 69.81% id in 222 aa, and to Escherichia coli lipoprotein releasing system ATP-binding protein LolD or b1117 SWALL:LOLD_ECOLI (SWALL:P75957) (233 aa) fasta scores: E(): 2.9e-28, 45.9% id in 220 aa; ABC transporter ATP-binding protein 1644578 3094076 BPSL1412 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_108034.1 1643853 D 272560 CDS YP_108035.1 53719049 3093521 complement(1644934..1646556) 1 NC_006350.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1646556 pgi 3093521 pgi Burkholderia pseudomallei K96243 glucose-6-phosphate isomerase YP_108035.1 1644934 R 272560 CDS YP_108036.1 53719050 3094077 complement(1646659..1648254) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1720 or rs02910 SWALL:Q8XYN8 (EMBL:AL646066) (531 aa) fasta scores: E(): 2.2e-50, 51.57% id in 508 aa, and to Pseudomonas aeruginosa hypothetical protein pa4949 SWALL:Q9HUL5 (EMBL:AE004907) (502 aa) fasta scores: E(): 1.4e-43, 40.94% id in 508 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 1648254 3094077 BPSL1414 Burkholderia pseudomallei K96243 hypothetical protein YP_108036.1 1646659 R 272560 CDS YP_108037.1 53719051 3093732 complement(1648302..1649606) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 D-amino acid dehydrogenase small subunit DadA or DadR or b1189 or z1952 or ecs1684 SWALL:DADA_ECOLI (SWALL:P29011) (432 aa) fasta scores: E(): 1.4e-17, 27.89% id in 441 aa, and to Rhizobium leguminosarum D-amino acid dehydrogenase small subunit DadA SWALL:DADA_RHILV (SWALL:Q9RAE6) (416 aa) fasta scores: E(): 5.2e-24, 31.33% id in 434 aa; D-amino acid dehydrogenase small subunit 1649606 3093732 BPSL1415 Burkholderia pseudomallei K96243 D-amino acid dehydrogenase small subunit YP_108037.1 1648302 R 272560 CDS YP_108038.1 53719052 3092591 1649862..1653932 1 NC_006350.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 1653932 purL 3092591 purL Burkholderia pseudomallei K96243 phosphoribosylformylglycinamidine synthase YP_108038.1 1649862 D 272560 CDS YP_108039.1 53719053 3093733 1653937..1654470 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein r01655 or smc00230 SWALL:Q92PS5 (EMBL:AL591788) (165 aa) fasta scores: E(): 1.6e-23, 47.56% id in 164 aa, and to Brucella melitensis acetyltransferase bmei0466 SWALL:Q8YIH8 (EMBL:AE009489) (169 aa) fasta scores: E(): 2.4e-23, 48.52% id in 169 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; acetyltransferase 1654470 3093733 BPSL1417 Burkholderia pseudomallei K96243 acetyltransferase YP_108039.1 1653937 D 272560 CDS YP_108040.1 53719054 3092865 complement(1654568..1655347) 1 NC_006350.1 Similar to Ralstonia solanacearum isomerase rotamase signal peptide protein rsc1744 or rs02932 SWALL:Q8XYL4 (EMBL:AL646066) (255 aa) fasta scores: E(): 9.3e-38, 46.69% id in 257 aa, and to Brucella melitensis peptidyl-prolyl cis-trans isomerase bmei0123 SWALL:Q8YJG0 (EMBL:AE009455) (331 aa) fasta scores: E(): 4.7e-18, 33.46% id in 263 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; exported isomerase 1655347 3092865 BPSL1418 Burkholderia pseudomallei K96243 exported isomerase YP_108040.1 1654568 R 272560 CDS YP_108041.1 53719055 3092866 complement(1655372..1655686) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1745 or rs02933 SWALL:Q8XYL3 (EMBL:AL646066) (94 aa) fasta scores: E(): 1.1e-14, 61.95% id in 92 aa, and to Xanthomonas axonopodis hypothetical protein xac2314 SWALL:AAM37167 (EMBL:AE011869) (89 aa) fasta scores: E(): 7.2e-13, 57.64% id in 85 aa; hypothetical protein 1655686 3092866 BPSL1419 Burkholderia pseudomallei K96243 hypothetical protein YP_108041.1 1655372 R 272560 CDS YP_108042.1 53719056 3094013 complement(1655689..1656219) 1 NC_006350.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 1656219 3094013 BPSL1420 Burkholderia pseudomallei K96243 intracellular septation protein A YP_108042.1 1655689 R 272560 CDS YP_108043.1 53719057 3091857 complement(1656312..1656743) 1 NC_006350.1 Similar to the C-terminal region of Streptococcus gordonii Challis peptide methionine sulfoxide reductase MsrA/MsrB MsrAB or MsrA SWALL:MSAB_STRGC (SWALL:Q9LAM9) (311 aa) fasta scores: E(): 1e-23, 55.22% id in 134 aa, and to Ralstonia solanacearum peptide methionine sulfoxide reductase rsc1747 or rs02935 SWALL:MSRB_RALSO (SWALL:Q8XYL1) (128 aa) fasta scores: E(): 1.9e-33, 69.1% id in 123 aa; peptide methionine sulfoxide reductase 1656743 msrB 3091857 msrB Burkholderia pseudomallei K96243 peptide methionine sulfoxide reductase YP_108043.1 1656312 R 272560 CDS YP_108044.1 53719058 3094014 complement(1656794..1658371) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1748 or rs02936 SWALL:Q8XYL0 (EMBL:AL646066) (525 aa) fasta scores: E(): 1.8e-117, 62.35% id in 518 aa, and to Escherichia coli hypothetical protein YdiU or b1706 SWALL:YDIU_ECOLI (SWALL:P77649) (478 aa) fasta scores: E(): 6.1e-54, 48.35% id in 486 aa; hypothetical protein 1658371 3094014 BPSL1422 Burkholderia pseudomallei K96243 hypothetical protein YP_108044.1 1656794 R 272560 CDS YP_108045.1 53719059 3094023 1658487..1660127 1 NC_006350.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1660127 3094023 BPSL1423 Burkholderia pseudomallei K96243 long-chain-fatty-acid--CoA ligase YP_108045.1 1658487 D 272560 CDS YP_108046.1 53719060 3094024 1660379..1662463 1 NC_006350.1 Similar to Ralstonia solanacearum probable trifunctional: enoyl-CoA hydratase and delta3-cis-delta2-trans-enoyl-CoA isomerase and 3-hydroxyacyl-CoA dehydrogenase oxidoreductase rsc1759 or rs02946 SWALL:Q8XYJ9 (EMBL:AL646066) (706 aa) fasta scores: E(): 2.4e-192, 74.6% id in 693 aa, and to Escherichia coli fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase] FadB or OldB or b3846 SWALL:FADB_ECOLI (SWALL:P21177) (729 aa) fasta scores: E(): 2.1e-55, 32.98% id in 670 aa; fatty acid degradation protein 1662463 3094024 BPSL1424 Burkholderia pseudomallei K96243 fatty acid degradation protein YP_108046.1 1660379 D 272560 CDS YP_108047.1 53719061 3094081 1662505..1663143 1 NC_006350.1 Similar to Escherichia coli pyrazinamidase/nicotinamidase PncA or Nam or b1768 SWALL:PNCA_ECOLI (SWALL:P21369) (213 aa) fasta scores: E(): 2.6e-25, 43.07% id in 195 aa, and to Ralstonia solanacearum probable bifunctional protein: pyrazinamidase and nicotinamidase hydrolase rsc1760 or rs02947 SWALL:Q8XYJ8 (EMBL:AL646066) (210 aa) fasta scores: E(): 3e-60, 71.56% id in 204 aa; pyrazinamidase/nicotinamidase 1663143 3094081 BPSL1425 Burkholderia pseudomallei K96243 pyrazinamidase/nicotinamidase YP_108047.1 1662505 D 272560 CDS YP_108048.1 53719062 3094082 1663202..1664380 1 NC_006350.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1664380 3094082 BPSL1426 Burkholderia pseudomallei K96243 acetyl-CoA acetyltransferase YP_108048.1 1663202 D 272560 CDS YP_108049.1 53719063 3094105 complement(1664742..1665281) 1 NC_006350.1 hypothetical protein 1665281 3094105 BPSL1427 Burkholderia pseudomallei K96243 hypothetical protein YP_108049.1 1664742 R 272560 CDS YP_108050.1 53719064 3094106 1665958..1666272 1 NC_006350.1 Similar to Chlorobium tepidum TLS hypothetical protein ct1263 SWALL:AAM72493 (EMBL:AE012886) (100 aa) fasta scores: E(): 3.5e-15, 48.98% id in 98 aa, and to Clostridium perfringens hypothetical protein cpe0853 SWALL:Q8XM37 (EMBL:AP003188) (100 aa) fasta scores: E(): 1e-10, 44% id in 100 aa; hypothetical protein 1666272 3094106 BPSL1428 Burkholderia pseudomallei K96243 hypothetical protein YP_108050.1 1665958 D 272560 CDS YP_108051.1 53719065 3094677 1666269..1666751 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1764 or rs02951 SWALL:Q8XYJ4 (EMBL:AL646066) (144 aa) fasta scores: E(): 1.9e-25, 57.48% id in 127 aa, and to Pyrobaculum aerophilum hypothetical protein pae1329 SWALL:Q8ZXD8 (EMBL:AE009816) (147 aa) fasta scores: E(): 1.5e-10, 38.71% id in 124 aa; hypothetical protein 1666751 3094677 BPSL1429 Burkholderia pseudomallei K96243 hypothetical protein YP_108051.1 1666269 D 272560 CDS YP_108052.1 53719066 3094678 1666843..1667841 1 NC_006350.1 Similar to Escherichia coli NADP-dependent oxidoreductase YncB or b1449 SWALL:YNCB_ECOLI (SWALL:P76113) (353 aa) fasta scores: E(): 4.1e-51, 46.56% id in 335 aa, and to Ralstonia solanacearum probable NADP-dependent oxidoreductase oxidoreductase rsc1766 or rs02953 SWALL:Q8XYJ2 (EMBL:AL646066) (336 aa) fasta scores: E(): 4.3e-82, 66.07% id in 336 aa; oxidoreductase 1667841 3094678 BPSL1430 Burkholderia pseudomallei K96243 oxidoreductase YP_108052.1 1666843 D 272560 CDS YP_108053.1 53719067 3094698 1667911..1668906 1 NC_006350.1 Similar to Alcaligenes eutrophus esterase/lipase SWALL:Q44019 (EMBL:L36817) (364 aa) fasta scores: E(): 4.5e-74, 60.62% id in 320 aa, and to Ralstonia solanacearum probable esterase/lipase rsc1772 or rs02959 SWALL:Q8XYI6 (EMBL:AL646066) (344 aa) fasta scores: E(): 6e-69, 57.72% id in 317 aa; esterase/lipase 1668906 3094698 BPSL1431 Burkholderia pseudomallei K96243 esterase/lipase YP_108053.1 1667911 D 272560 CDS YP_108054.1 53719068 3094699 1669270..1669710 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1774 or rs02961 SWALL:Q8XYI4 (EMBL:AL646066) (148 aa) fasta scores: E(): 1.4e-16, 46.04% id in 139 aa, and to Halobacterium sp. vng1398C SWALL:Q9HPZ8 (EMBL:AE005058) (147 aa) fasta scores: E(): 1e-13, 45.11% id in 133 aa; acetyltransferase 1669710 3094699 BPSL1432 Burkholderia pseudomallei K96243 acetyltransferase YP_108054.1 1669270 D 272560 CDS YP_108055.1 53719069 3092672 complement(1669746..1670597) 1 NC_006350.1 Similar to Ralstonia solanacearum signal peptide protein rsc1780 or rs04168 SWALL:Q8XYH8 (EMBL:AL646066) (272 aa) fasta scores: E(): 6.7e-31, 47.51% id in 261 aa, and to Pseudomonas aeruginosa hypothetical protein pa0339 SWALL:Q9I6F4 (EMBL:AE004471) (251 aa) fasta scores: E(): 2.2e-20, 51.25% id in 240 aa; hypothetical protein 1670597 3092672 BPSL1433 Burkholderia pseudomallei K96243 hypothetical protein YP_108055.1 1669746 R 272560 CDS YP_108056.1 53719070 3092673 complement(1670668..1671621) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1782 or rs04173 SWALL:Q8XYH6 (EMBL:AL646066) (346 aa) fasta scores: E(): 1.2e-52, 54.04% id in 309 aa, and to Escherichia coli unknown protein from 2d-page YgfZ or b2898 SWALL:UP14_ECOLI (SWALL:P39179) (325 aa) fasta scores: E(): 5.8e-18, 28.33% id in 307 aa. Note: This CDS is shorter in its N-terminal region than some of its database matches; hypothetical protein 1671621 3092673 BPSL1434 Burkholderia pseudomallei K96243 hypothetical protein YP_108056.1 1670668 R 272560 CDS YP_108057.1 53719071 3094599 1671793..1672812 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1783 or rs06023 SWALL:Q8XYH5 (EMBL:AL646066) (377 aa) fasta scores: E(): 3.4e-76, 59.88% id in 339 aa, and to Yersinia pestis exported protein ypo1604 SWALL:Q8ZFT1 (EMBL:AJ414149) (341 aa) fasta scores: E(): 4e-39, 38.73% id in 333 aa. Note: This CDS is shorter in its N-terminal region than some of its database matches; lipoprotein 1672812 3094599 BPSL1435 Burkholderia pseudomallei K96243 lipoprotein YP_108057.1 1671793 D 272560 CDS YP_108058.1 53719072 3094600 1672813..1673433 1 NC_006350.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1673433 tmk 3094600 tmk Burkholderia pseudomallei K96243 thymidylate kinase YP_108058.1 1672813 D 272560 CDS YP_108059.1 53719073 3093305 1673453..1674487 1 NC_006350.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 1674487 3093305 BPSL1437 Burkholderia pseudomallei K96243 DNA polymerase III subunit delta' YP_108059.1 1673453 D 272560 CDS YP_108060.1 53719074 3093306 1674530..1675036 1 NC_006350.1 Similar to Anabaena sp. hypothetical protein alr4468 SWALL:Q8YNU3 (EMBL:AP003596) (163 aa) fasta scores: E(): 4e-35, 56.17% id in 162 aa, and to Escherichia coli hypothetical acetyltransferase YncA or b1448 SWALL:YNCA_ECOLI (SWALL:P76112) (172 aa) fasta scores: E(): 8.3e-11, 32.71% id in 162 aa; acetyltransferase 1675036 3093306 BPSL1438 Burkholderia pseudomallei K96243 acetyltransferase YP_108060.1 1674530 D 272560 CDS YP_108061.1 53719075 3092237 1675112..1675921 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1787 or rs04186 SWALL:Q8XYH1 (EMBL:AL646066) (267 aa) fasta scores: E(): 5.7e-67, 64.88% id in 262 aa, and to Escherichia coli, and Escherichia coli O157:H7 deoxyribonuclease YcfH or b1100 or z1739 or ecs1478 SWALL:YCFH_ECOLI (SWALL:P37346) (265 aa) fasta scores: E(): 2.1e-35, 45.48% id in 266 aa; deoxyribonuclease 1675921 3092237 BPSL1439 Burkholderia pseudomallei K96243 deoxyribonuclease YP_108061.1 1675112 D 272560 CDS YP_108062.1 53719076 3092238 1675932..1676660 1 NC_006350.1 Similar to Ralstonia solanacearum probable ankyrin repeat harboring signal peptide protein rsc1788 or rs04187 SWALL:Q8XYH0 (EMBL:AL646066) (291 aa) fasta scores: E(): 9.2e-29, 45.74% id in 223 aa, and to the N-terminal region of Oryza sativa ankyrin osjnba0040e01.26 SWALL:Q9AUW0 (EMBL:AC079887) (252 aa) fasta scores: E(): 3.7e-09, 33% id in 203 aa. Note: Most of the database matches in this CDS are to the N-terminal region of ankyrin-related eukaryotic proteins; hypothetical protein 1676660 3092238 BPSL1440 Burkholderia pseudomallei K96243 hypothetical protein YP_108062.1 1675932 D 272560 CDS YP_108063.1 53719077 3093249 1676737..1677087 1 NC_006350.1 hypothetical protein 1677087 3093249 BPSL1441 Burkholderia pseudomallei K96243 hypothetical protein YP_108063.1 1676737 D 272560 CDS YP_108064.1 53719078 3093250 1677154..1678341 1 NC_006350.1 Similar to Xanthomonas axonopodis membrane protein xac1001 SWALL:AAM35884 (EMBL:AE011729) (375 aa) fasta scores: E(): 3.3e-62, 53.79% id in 329 aa, and to Streptomyces coelicolor membrane protein sco2070 or sc4a10.03 SWALL:Q9S2Y1 (EMBL:AL109663) (382 aa) fasta scores: E(): 2.5e-43, 41.39% id in 302 aa; hypothetical protein 1678341 3093250 BPSL1442 Burkholderia pseudomallei K96243 hypothetical protein YP_108064.1 1677154 D 272560 CDS YP_108065.1 53719079 3094297 1678454..1679764 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0787 SWALL:Q9I5F1 (EMBL:AE004513) (387 aa) fasta scores: E(): 2.7e-98, 69.92% id in 389 aa, and to Rhizobium meliloti hypothetical protein r03044 or smc02491 SWALL:Q92JU6 (EMBL:AL591792) (378 aa) fasta scores: E(): 2.5e-25, 35.45% id in 378 aa. Note: this CDS is longer in its N-terminal region than most of its database matches. Possible alternative start codon at residue 45; hypothetical protein 1679764 3094297 BPSL1443 Burkholderia pseudomallei K96243 hypothetical protein YP_108065.1 1678454 D 272560 CDS YP_108066.1 53719080 3094298 1680141..1681205 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical sugar transferase smb20117 rb0117 or smb20117 SWALL:Q92X45 (EMBL:AL603642) (366 aa) fasta scores: E(): 3.5e-74, 59.94% id in 347 aa, and to Chlorobium tepidum TLS glycosyl transferase, group 1 family protein ct0839 SWALL:AAM72075 (EMBL:AE012851) (356 aa) fasta scores: E(): 2.2e-61, 47.95% id in 342 aa; sugar transferase 1681205 3094298 BPSL1444 Burkholderia pseudomallei K96243 sugar transferase YP_108066.1 1680141 D 272560 CDS YP_108067.1 53719081 3092363 complement(1681413..1682000) 1 NC_006350.1 Similar to Ralstonia solanacearum lipoprotein rsc1878 or rs03438 SWALL:Q8XY85 (EMBL:AL646067) (200 aa) fasta scores: E(): 1.8e-34, 54.54% id in 198 aa, and to Xanthomonas axonopodis hypothetical protein xac4219 SWALL:AAM39054 (EMBL:AE012074) (301 aa) fasta scores: E(): 6.1e-06, 32.3% id in 130 aa; lipoprotein 1682000 3092363 BPSL1445 Burkholderia pseudomallei K96243 lipoprotein YP_108067.1 1681413 R 272560 CDS YP_108068.1 53719082 3092364 complement(1682238..1682750) 1 NC_006350.1 No significant database matches. C-terminal region with high content in proline residues; hypothetical protein 1682750 3092364 BPSL1446 Burkholderia pseudomallei K96243 hypothetical protein YP_108068.1 1682238 R 272560 CDS YP_108069.1 53719083 3091723 complement(1682926..1683216) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4874 SWALL:Q9HUT9 (EMBL:AE004901) (138 aa) fasta scores: E(): 5.3e-12, 60.24% id in 83 aa; hypothetical protein 1683216 3091723 BPSL1447 Burkholderia pseudomallei K96243 hypothetical protein YP_108069.1 1682926 R 272560 CDS YP_108070.1 53719084 3092601 1683714..1684757 1 NC_006350.1 Similar to Escherichia coli L-asparaginase II precursor AnsB or b2957 SWALL:ASG2_ECOLI (SWALL:P00805) (348 aa) fasta scores: E(): 3.5e-47, 47% id in 334 aa, and to Ralstonia solanacearum probable L-asparaginase II precursor signal peptide protein rsc1306 or rs02828 SWALL:Q8XZT9 (EMBL:AL646063) (367 aa) fasta scores: E(): 3.1e-56, 54.7% id in 351 aa; L-asparaginase II 1684757 ansB 3092601 ansB Burkholderia pseudomallei K96243 L-asparaginase II YP_108070.1 1683714 D 272560 CDS YP_108071.1 53719085 3091724 complement(1684933..1685403) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2148 or rs01455 SWALL:Q8XXG6 (EMBL:AL646068) (160 aa) fasta scores: E(): 5e-19, 46.25% id in 160 aa, and to Escherichia coli unknown protein from 2D-PAGE YgaU or b2665 SWALL:UP04_ECOLI (SWALL:P39169) (148 aa) fasta scores: E(): 1.1e-12, 37.73% id in 159 aa; LysM domain/BON superfamily protein 1685403 3091724 BPSL1449 Burkholderia pseudomallei K96243 LysM domain/BON superfamily protein YP_108071.1 1684933 R 272560 CDS YP_108072.1 53719086 3093848 complement(1686162..1687067) 1 NC_006350.1 Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GlxR or GlxB1 or b0509 SWALL:GLXR_ECOLI (SWALL:P77161) (292 aa) fasta scores: E(): 8.7e-65, 62.23% id in 286 aa, and to Rhizobium loti probable oxidoreductase mlr0254 SWALL:Q98N82 (EMBL:AP002994) (305 aa) fasta scores: E(): 8.4e-70, 65.3% id in 294 aa; 2-hydroxy-3-oxopropionate reductase 1687067 glxR 3093848 glxR Burkholderia pseudomallei K96243 2-hydroxy-3-oxopropionate reductase YP_108072.1 1686162 R 272560 CDS YP_108073.1 53719087 3092389 complement(1687165..1687953) 1 NC_006350.1 Similar to Escherichia coli hydroxypyruvate isomerase Hyi or Gip or b0508 SWALL:HYI_ECOLI (SWALL:P30147) (258 aa) fasta scores: E(): 1.5e-54, 56.29% id in 254 aa, and to Ralstonia solanacearum probable hydroxypyruvate isomerase rsc3282 or rs02511 SWALL:Q8XUA9 (EMBL:AL646074) (260 aa) fasta scores: E(): 1.6e-69, 66.66% id in 261 aa; hydroxypyruvate isomerase 1687953 hyi 3092389 hyi Burkholderia pseudomallei K96243 hydroxypyruvate isomerase YP_108073.1 1687165 R 272560 CDS YP_108074.1 53719088 3092122 complement(1688070..1689845) 1 NC_006350.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 1689845 gcl 3092122 gcl Burkholderia pseudomallei K96243 glyoxylate carboligase YP_108074.1 1688070 R 272560 CDS YP_108075.1 53719089 3093334 1690008..1690919 1 NC_006350.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsc3280 or rs02509 SWALL:Q8XUB1 (EMBL:AL646074) (303 aa) fasta scores: E(): 1.9e-88, 69.96% id in 303 aa, and to Brucella melitensis transcriptional regulatory protein, LysR family bmeii1065 SWALL:Q8YB36 (EMBL:AE009739) (325 aa) fasta scores: E(): 8.3e-40, 40.39% id in 302 aa; LysR family transcriptional regulator 1690919 3093334 BPSL1453 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108075.1 1690008 D 272560 CDS YP_108076.1 53719090 3093335 complement(1691058..1691483) 1 NC_006350.1 Low similarity to Ralstonia solanacearum cytochrome C oxidase polypeptide II oxidoreductase rsp1653 or rs02212 SWALL:Q8XPI7 (EMBL:AL646086) (125 aa) fasta scores: E(): 3e-19, 58.47% id in 118 aa, and to Thermus thermophilus cytochrome C oxidase polypeptide II CbaB or CtaC SWALL:COX2_THETH (SWALL:P98052) (168 aa) fasta scores: E(): 0.00023, 30.23% id in 86 aa; cytochrome C oxidase 1691483 3093335 BPSL1454 Burkholderia pseudomallei K96243 cytochrome C oxidase YP_108076.1 1691058 R 272560 CDS YP_108077.1 53719091 3094551 complement(1691494..1692414) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp1652 or rs02211 SWALL:Q8XPI8 (EMBL:AL646086) (309 aa) fasta scores: E(): 1.5e-79, 69.9% id in 299 aa, and to Agrobacterium tumefaciens hypothetical protein atu2243 or agr_c_4081 SWALL:Q8UD84 (EMBL:AE009174) (291 aa) fasta scores: E(): 2.6e-08, 30.14% id in 209 aa; hypothetical protein 1692414 3094551 BPSL1455 Burkholderia pseudomallei K96243 hypothetical protein YP_108077.1 1691494 R 272560 CDS YP_108078.1 53719092 3094552 1692620..1693327 1 NC_006350.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1693327 3094552 BPSL1456 Burkholderia pseudomallei K96243 RNA polymerase sigma factor YP_108078.1 1692620 D 272560 CDS YP_108079.1 53719093 3094573 1693317..1694507 1 NC_006350.1 C-terminal region similar to Ralstonia solanacearum transmembrane protein rsp1650 or rs02209 SWALL:Q8XPJ0 (EMBL:AL646086) (276 aa) fasta scores: E(): 6.9e-20, 46.89% id in 209 aa, and to Rhizobium loti hypothetical protein mlr3808 SWALL:Q98FE7 (EMBL:AP003002) (301 aa) fasta scores: E(): 1.3e-15, 34.97% id in 243 aa. Note: Contains a 14xSD(V/M)PV repeat; hypothetical protein 1694507 3094573 BPSL1457 Burkholderia pseudomallei K96243 hypothetical protein YP_108079.1 1693317 D 272560 CDS YP_108080.1 53719094 3093548 1694743..1695117 1 NC_006350.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1695117 rpsF 3093548 rpsF Burkholderia pseudomallei K96243 30S ribosomal protein S6 YP_108080.1 1694743 D 272560 CDS YP_108081.1 53719095 3094574 1695154..1695453 1 NC_006350.1 Low similarity to Escherichia coli primosomal replication protein N PriB or b4201 SWALL:PRIB_ECOLI (SWALL:P07013) (103 aa) fasta scores: E(): 0.0042, 30.3% id in 99 aa and similar to Ralstonia solanacearum hypothetical protein rsc1308 or rs02830 SWALL:Q8XZT7 (EMBL:AL646063) (108 aa) fasta scores: E(): 5.2e-13, 46.46% id in 99 aa; primosomal replication protein 1695453 3094574 BPSL1459 Burkholderia pseudomallei K96243 primosomal replication protein YP_108081.1 1695154 D 272560 CDS YP_108082.1 53719096 3091799 1695456..1695731 1 NC_006350.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1695731 rpsR 3091799 rpsR Burkholderia pseudomallei K96243 30S ribosomal protein S18 YP_108082.1 1695456 D 272560 CDS YP_108083.1 53719097 3093180 1695759..1696211 1 NC_006350.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1696211 rplI 3093180 rplI Burkholderia pseudomallei K96243 50S ribosomal protein L9 YP_108083.1 1695759 D 272560 CDS YP_108084.1 53719098 3093450 1696355..1697737 1 NC_006350.1 unwinds double stranded DNA; replicative DNA helicase 1697737 dnaB 3093450 dnaB Burkholderia pseudomallei K96243 replicative DNA helicase YP_108084.1 1696355 D 272560 CDS YP_108085.1 53719099 3094583 1697876..1698502 1 NC_006350.1 Similar to Rhizobium meliloti Pit accessory protein r00187 or smc02862 SWALL:PITX_RHIME (SWALL:O30498) (214 aa) fasta scores: E(): 1.8e-15, 30.95% id in 210 aa, and to Ralstonia solanacearum hypothetical protein rsc1312 rsc1312 or rs02834 SWALL:Q8XZT3 (EMBL:AL646063) (208 aa) fasta scores: E(): 2.5e-45, 67.3% id in 208 aa; hypothetical protein 1698502 3094583 BPSL1463 Burkholderia pseudomallei K96243 hypothetical protein YP_108085.1 1697876 D 272560 CDS YP_108086.1 53719100 3094584 1698513..1699523 1 NC_006350.1 Similar to Ralstonia solanacearum probable low-affinity phosphate transporter lipoprotein transmembrane rsc1313 or rs02835 SWALL:Q8XZT2 (EMBL:AL646063) (336 aa) fasta scores: E(): 2.5e-104, 80.95% id in 336 aa, and to Rhizobium meliloti probable low-affinity inorganic phosphate transporter Pit or r00186 or smc02861 SWALL:PIT_RHIME (SWALL:O30499) (334 aa) fasta scores: E(): 6.9e-75, 63.55% id in 321 aa; integral membrane transport protein 1699523 3094584 BPSL1464 Burkholderia pseudomallei K96243 integral membrane transport protein YP_108086.1 1698513 D 272560 CDS YP_108087.1 53719101 3094544 complement(1699758..1700972) 1 NC_006350.1 Only N-terminal region similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1314 or rs02836 SWALL:Q8XZT1 (EMBL:AL646063) (258 aa) fasta scores: E(): 1e-21, 48.23% id in 255 aa, and to Neisseria meningitidis outer membrane protein precursor gna2001 or nmb2001 SWALL:Q9JR56 (EMBL:AF226476) (251 aa) fasta scores: E(): 1.6e-08, 38.41% id in 151 aa. Note: From residue 175 this CDS has No significant database matches; peptidase 1700972 3094544 BPSL1465 Burkholderia pseudomallei K96243 peptidase YP_108087.1 1699758 R 272560 CDS YP_108088.1 53719102 3094545 complement(1701212..1702603) 1 NC_006350.1 Similar to Xanthomonas campestris hypothetical protein Xcc1737 xcc1737 SWALL:AAM41028 (EMBL:AE012275) (469 aa) fasta scores: E(): 8.8e-105, 61.4% id in 469 aa, and to Clostridium perfringens probable phosphate starvation inducible protein cpe1665 SWALL:Q8XJT8 (EMBL:AP003191) (459 aa) fasta scores: E(): 6.8e-39, 35.23% id in 474 aa, and C-terminal region similar to Escherichia coli, and Escherichia coli O157:H7 PhoH protein or PsiH or b1020 or z1522 or ecs1266 SWALL:PHOH_ECOLI (SWALL:P31544) (354 aa) fasta scores: E(): 1.3e-11, 37.17% id in 191 aa; hypothetical protein 1702603 3094545 BPSL1466 Burkholderia pseudomallei K96243 hypothetical protein YP_108088.1 1701212 R 272560 CDS YP_108089.1 53719103 3094546 complement(1703337..1703798) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 bacterioferritin comigratory protein Bcp or b2480 or z3739 or ecs3342 SWALL:BCP_ECOLI (SWALL:P23480) (156 aa) fasta scores: E(): 2.1e-16, 39.28% id in 140 aa, and to Ralstonia solanacearum probable bacterioferritin comigratory oxidoreductase rsc1317 or rs02839 SWALL:Q8XZS8 (EMBL:AL646063) (154 aa) fasta scores: E(): 5e-41, 68.83% id in 154 aa; bacterioferritin comigratory protein 1703798 3094546 BPSL1467 Burkholderia pseudomallei K96243 bacterioferritin comigratory protein YP_108089.1 1703337 R 272560 CDS YP_108090.1 53719104 3094547 complement(1703888..1704784) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1318 or rs02840 SWALL:Q8XZS7 (EMBL:AL646063) (297 aa) fasta scores: E(): 3.5e-91, 73.4% id in 297 aa, and to Yersinia pestis, and Yersinia pseudotuberculosis hypothetical protein ypo2419 SWALL:Q93PD7 (EMBL:AJ414152) (301 aa) fasta scores: E(): 7.3e-33, 34.89% id in 298 aa; hypothetical protein 1704784 3094547 BPSL1468 Burkholderia pseudomallei K96243 hypothetical protein YP_108090.1 1703888 R 272560 CDS YP_108091.1 53719105 3093470 complement(1706795..1707802) 1 NC_006350.1 Similar to Salmonella typhimurium polymixin resistance protein PmrF or stm2298 SWALL:O52324 (EMBL:AF036677) (327 aa) fasta scores: E(): 5.8e-55, 51.63% id in 306 aa, and to Bacteriophage Sfx bactoprenol glucosyl transferase GtrB SWALL:GTRB_BPSFX (SWALL:Q9T1D6) (305 aa) fasta scores: E(): 2e-26, 31.14% id in 305 aa; polymixin resistance glucosyl transferase 1707802 3093470 BPSL1471 Burkholderia pseudomallei K96243 polymixin resistance glucosyl transferase YP_108091.1 1706795 R 272560 CDS YP_108092.1 53719106 3093574 complement(1707809..1708960) 1 NC_006350.1 Similar to Escherichia coli lipopolysaccharide biosynthesis protein RffA or WecE or b3791 SWALL:RFFA_ECOLI (SWALL:P27833) (376 aa) fasta scores: E(): 4e-31, 35.09% id in 379 aa, and to Ralstonia solanacearum aminotransferase rsc1322 or rs02844 SWALL:Q8XZS3 (EMBL:AL646063) (386 aa) fasta scores: E(): 2.2e-102, 67.01% id in 385 aa; LPS biosynthesis-like protein 1708960 3093574 BPSL1472 Burkholderia pseudomallei K96243 LPS biosynthesis-like protein YP_108092.1 1707809 R 272560 CDS YP_108093.1 53719107 3093575 complement(1709087..1709458) 1 NC_006350.1 Similar to Ralstonia solanacearum small multidrug resistance transmembrane protein rsc1323 or rs02845 SWALL:Q8XZS2 (EMBL:AL646063) (123 aa) fasta scores: E(): 4.6e-35, 79.67% id in 123 aa, and to Brucella melitensis transporter DME family bmeii0439 SWALL:Q8YCT9 (EMBL:AE009680) (159 aa) fasta scores: E(): 2e-10, 40% id in 115 aa; hypothetical protein 1709458 3093575 BPSL1473 Burkholderia pseudomallei K96243 hypothetical protein YP_108093.1 1709087 R 272560 CDS YP_108094.1 53719108 3092098 complement(1709479..1711185) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1324 or rs02846 SWALL:Q8XZS1 (EMBL:AL646063) (556 aa) fasta scores: E(): 2e-106, 49.64% id in 564 aa, and to Escherichia coli hypothetical protein YfbI or b2257 SWALL:YFBI_ECOLI (SWALL:P76473) (550 aa) fasta scores: E(): 2.8e-28, 24.15% id in 563 aa; hypothetical protein 1711185 3092098 BPSL1474 Burkholderia pseudomallei K96243 hypothetical protein YP_108094.1 1709479 R 272560 CDS YP_108095.1 53719109 3092099 complement(1711354..1711728) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1325 or rs02847 SWALL:Q8XZS0 (EMBL:AL646063) (126 aa) fasta scores: E(): 1.7e-32, 73.59% id in 125 aa, and to Xanthomonas campestris hypothetical protein xcc1710 SWALL:AAM41004 (EMBL:AE012272) (124 aa) fasta scores: E(): 5.3e-10, 35.29% id in 119 aa; hypothetical protein 1711728 3092099 BPSL1475 Burkholderia pseudomallei K96243 hypothetical protein YP_108095.1 1711354 R 272560 CDS YP_108096.1 53719110 3092368 1712067..1713305 1 NC_006350.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase 1713305 3092368 BPSL1476 Burkholderia pseudomallei K96243 aminotransferase YP_108096.1 1712067 D 272560 CDS YP_108097.1 53719111 3094454 1713350..1714678 1 NC_006350.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1714678 hom 3094454 hom Burkholderia pseudomallei K96243 homoserine dehydrogenase YP_108097.1 1713350 D 272560 CDS YP_108098.1 53719112 3092336 1714686..1716137 1 NC_006350.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1716137 thrC 3092336 thrC Burkholderia pseudomallei K96243 threonine synthase YP_108098.1 1714686 D 272560 CDS YP_108099.1 53719113 3094366 1716911..1718227 1 NC_006350.1 Similar to Escherichia coli molybdopterin biosynthesis protein MoeA or ChlE or BisB or NarE or b0827 SWALL:MOEA_ECOLI (SWALL:P12281) (411 aa) fasta scores: E(): 4.7e-42, 39.72% id in 433 aa, and to Alcaligenes eutrophus MoeA protein SWALL:Q8VMA0 (EMBL:AJ279073) (412 aa) fasta scores: E(): 1.4e-68, 66.2% id in 432 aa; molybdopterin biosynthesis protein 1718227 moeA 3094366 moeA Burkholderia pseudomallei K96243 molybdopterin biosynthesis protein YP_108099.1 1716911 D 272560 CDS YP_108100.1 53719114 3091687 1718249..1718506 1 NC_006350.1 Similar to Escherichia coli molybdopterin converting factor subunit 1 MoaD or ChlA4 or ChlM or b0784 SWALL:MOAD_ECOLI (SWALL:P30748) (81 aa) fasta scores: E(): 1.1e-05, 40.96% id in 83 aa, and to Ralstonia solanacearum probable molybdopterin converting factor rsc1331 or rs02853 SWALL:Q8XZR4 (EMBL:AL646064) (87 aa) fasta scores: E(): 7.8e-20, 65.88% id in 85 aa; molybdopterin converting factor subunit 1 1718506 moaD 3091687 moaD Burkholderia pseudomallei K96243 molybdopterin converting factor subunit 1 YP_108100.1 1718249 D 272560 CDS YP_108101.1 53719115 3094365 1718517..1719005 1 NC_006350.1 Similar to Escherichia coli molybdopterin converting factor subunit 2 MoaE or ChlA5 or b0785 SWALL:MOAE_ECOLI (SWALL:P30749) (149 aa) fasta scores: E(): 3.2e-28, 52.74% id in 146 aa, and to Alcaligenes eutrophus molybdopterin synthase large subunit MoaE SWALL:Q8VM98 (EMBL:AJ279073) (172 aa) fasta scores: E(): 7.3e-41, 66.88% id in 154 aa; molybdopterin converting factor subunit 2 1719005 moaE 3094365 moaE Burkholderia pseudomallei K96243 molybdopterin converting factor subunit 2 YP_108101.1 1718517 D 272560 CDS YP_108102.1 53719116 3092369 complement(1719333..1719875) 1 NC_006350.1 Similar to Brucella melitensis SEC-independent protein translocase bmeii0398 SWALL:Q8YCY0 (EMBL:AE009677) (141 aa) fasta scores: E(): 5.1e-13, 37.95% id in 137 aa, and to Agrobacterium tumefaciens hypothetical protein atu0250 or agr_c_428 SWALL:Q8UIP3 (EMBL:AE008997) (157 aa) fasta scores: E(): 1.4e-11, 42.34% id in 111 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; hypothetical protein 1719875 3092369 BPSL1482 Burkholderia pseudomallei K96243 hypothetical protein YP_108102.1 1719333 R 272560 CDS YP_108103.1 53719117 3093311 1720059..1720556 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YjeB or b4178 or z5785 or ecs5154 SWALL:YJEB_ECOLI (SWALL:P21498) (141 aa) fasta scores: E(): 7.2e-18, 38.62% id in 145 aa, and to Ralstonia solanacearum hypothetical protein rsc3397 or rs01705 SWALL:Q8XTZ8 (EMBL:AL646075) (172 aa) fasta scores: E(): 2.9e-24, 47.61% id in 168 aa; DNA-binding protein 1720556 3093311 BPSL1483 Burkholderia pseudomallei K96243 DNA-binding protein YP_108103.1 1720059 D 272560 CDS YP_108104.1 53719118 3094211 1720727..1723357 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ClpB protein or HtpM or b2592 or z3886 or ecs3455 SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 2e-185, 66.04% id in 860 aa, and to Ralstonia solanacearum probable ATP-dependent protease rsc1335 or rs02857 SWALL:Q8XZR0 (EMBL:AL646064) (862 aa) fasta scores: E(): 0, 80.2% id in 864 aa. Note: Also similar to BPSL0899 (773 aa) fasta scores: E(): 5.2e-47, 39.789% identity in 852 aa overlap and to BPSS1502 (Chromosome 2) (1013 aa) fasta scores: E(): 1.2e-48, 37.646% identity in 943 aa overlap; ClpB heat-shock protein 1723357 clpB 3094211 clpB Burkholderia pseudomallei K96243 ClpB heat-shock protein YP_108104.1 1720727 D 272560 CDS YP_108105.1 53719119 3093312 complement(1723606..1724028) 1 NC_006350.1 Similar to Escherichia coli hypothetical protein YidB or b3698 SWALL:YIDB_ECOLI (SWALL:P09996) (132 aa) fasta scores: E(): 1.1e-09, 37.39% id in 115 aa, and to Rhizobium loti hypothetical protein mlr4715 SWALL:Q98DG3 (EMBL:AP003004) (165 aa) fasta scores: E(): 1.9e-08, 33.85% id in 127 aa; hypothetical protein 1724028 3093312 BPSL1485 Burkholderia pseudomallei K96243 hypothetical protein YP_108105.1 1723606 R 272560 CDS YP_108106.1 53719120 3093390 complement(1724107..1724802) 1 NC_006350.1 Only central part similar to Ralstonia solanacearum COMEA-related signal peptide protein rsc0916 or rs04499 SWALL:Q8Y0X7 (EMBL:AL646061) (105 aa) fasta scores: E(): 1.5e-06, 51.92% id in 104 aa. Note: C-terminal region presents two regions of high hidrophilicity, high content in alanine amino acid residues, high G+C content and no databsse matches; hypothetical protein 1724802 3093390 BPSL1486 Burkholderia pseudomallei K96243 hypothetical protein YP_108106.1 1724107 R 272560 CDS YP_108107.1 53719121 3093391 1725071..1725565 1 NC_006350.1 Similar to Clostridium acetobutylicum transcriptional regulator, MerR family cac3507 SWALL:Q97DH0 (EMBL:AE007847) (126 aa) fasta scores: E(): 8.7e-14, 41.96% id in 112 aa, and to Streptomyces coelicolor MerR-family transcriptional regulator sco2875 or sce6.12 SWALL:Q9KZS6 (EMBL:AL353832) (135 aa) fasta scores: E(): 2.3e-11, 41.88% id in 117 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; MerR family transcriptional regulator 1725565 3093391 BPSL1487 Burkholderia pseudomallei K96243 MerR family transcriptional regulator YP_108107.1 1725071 D 272560 CDS YP_108108.1 53719122 3093332 1725514..1725912 1 NC_006350.1 Similar to Methanobacterium thermoautotrophicum gamma-carboxymuconolactone decarboxylase mth234 SWALL:O26336 (EMBL:AE000810) (125 aa) fasta scores: E(): 2.8e-20, 49.59% id in 123 aa, and to Acinetobacter calcoaceticus 4-carboxymuconolactone decarboxylase PcaC SWALL:DC4C_ACICA (SWALL:P20370) (134 aa) fasta scores: E(): 4.1e-09, 35.29% id in 119 aa. Note: N-terminal region overlaps in 17 residues with CDS upstream; decarboxylase 1725912 3093332 BPSL1488 Burkholderia pseudomallei K96243 decarboxylase YP_108108.1 1725514 D 272560 CDS YP_108109.1 53719123 3093333 complement(1726307..1727662) 1 NC_006350.1 Similar to Vibrio parahaemolyticus multidrug resistance protein NorM SWALL:NORM_VIBPA (SWALL:O82855) (456 aa) fasta scores: E(): 3.3e-43, 33.56% id in 438 aa, and to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1180 or rs04529 SWALL:Q8Y064 (EMBL:AL646063) (448 aa) fasta scores: E(): 5.6e-91, 57.52% id in 445 aa; hypothetical protein 1727662 3093333 BPSL1489 Burkholderia pseudomallei K96243 hypothetical protein YP_108109.1 1726307 R 272560 CDS YP_108110.1 53719124 3093011 complement(1727666..1729504) 1 NC_006350.1 Similar to Ralstonia solanacearum probable inner membrane transmembrane protein rsc1181 or rs05713 SWALL:Q8Y063 (EMBL:AL646063) (598 aa) fasta scores: E(): 5e-135, 52.92% id in 582 aa, and to Neisseria meningitidis inner membrane protein nma0497 SWALL:Q9JW86 (EMBL:AL162753) (558 aa) fasta scores: E(): 2.1e-23, 26.95% id in 575 aa; hypothetical protein 1729504 3093011 BPSL1490 Burkholderia pseudomallei K96243 hypothetical protein YP_108110.1 1727666 R 272560 CDS YP_108111.1 53719125 3093012 complement(1729638..1729901) 1 NC_006350.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1729901 rpmE2 3093012 rpmE2 Burkholderia pseudomallei K96243 50S ribosomal protein L31 YP_108111.1 1729638 R 272560 CDS YP_108112.1 53719126 3094806 complement(1730116..1730961) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1184 or rs05716 SWALL:Q8Y060 (EMBL:AL646063) (288 aa) fasta scores: E(): 4.8e-57, 53.52% id in 284 aa, and to Escherichia coli hypothetical protein YeeI or b1976 SWALL:YEEI_ECOLI (SWALL:P76346) (265 aa) fasta scores: E(): 1.5e-16, 33.88% id in 242 aa; hypothetical protein 1730961 3094806 BPSL1492 Burkholderia pseudomallei K96243 hypothetical protein YP_108112.1 1730116 R 272560 CDS YP_108113.1 53719127 3094807 complement(1731004..1732560) 1 NC_006350.1 Similar to Ralstonia solanacearum multidrug resistance-like transmembrane protein rsc1473 or rs03834 SWALL:Q8XZC8 (EMBL:AL646064) (517 aa) fasta scores: E(): 2.3e-40, 31.05% id in 512 aa, and to Xanthomonas campestris multidrug resistance membrane translocase xcc1400 SWALL:AAM40698 (EMBL:AE012239) (526 aa) fasta scores: E(): 3.5e-24, 24.95% id in 521 aa; hypothetical protein 1732560 3094807 BPSL1493 Burkholderia pseudomallei K96243 hypothetical protein YP_108113.1 1731004 R 272560 CDS YP_108114.1 53719128 3094530 complement(1732557..1733057) 1 NC_006350.1 Similar to Deinococcus radiodurans transcriptional regulator, MerR family dr2306 SWALL:Q9RS21 (EMBL:AE002062) (155 aa) fasta scores: E(): 7.3e-21, 50% id in 144 aa, and to the N-terminal region of Streptomyces coelicolor MerR-family transcriptional regulator sco7698 or sc1a4.06C SWALL:Q9EX58 (EMBL:AL450433) (380 aa) fasta scores: E(): 4.3e-06, 37.33% id in 150 aa; MerR family transcriptional regulator 1733057 3094530 BPSL1494 Burkholderia pseudomallei K96243 MerR family transcriptional regulator YP_108114.1 1732557 R 272560 CDS YP_108115.1 53719129 3094080 complement(1733194..1734456) 1 NC_006350.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1734456 rho 3094080 rho Burkholderia pseudomallei K96243 transcription termination factor Rho YP_108115.1 1733194 R 272560 CDS YP_108116.1 53719130 3094531 complement(1734520..1734645) 1 NC_006350.1 hypothetical protein 1734645 3094531 BPSL1496 Burkholderia pseudomallei K96243 hypothetical protein YP_108116.1 1734520 R 272560 CDS YP_108117.1 53719131 3091475 complement(1734652..1734978) 1 NC_006350.1 Similar to Escherichia coli, Salmonella typhimurium, and Salmonella typhi thioredoxin 1 TrxA or TsnC or FipA or b3781 or stm3915 or sty3639 SWALL:THIO_ECOLI (SWALL:P00274) (108 aa) fasta scores: E(): 1.2e-26, 64.48% id in 107 aa, and to Ralstonia solanacearum probable thioredoxin 1 rsc1188 or rs05720 SWALL:Q8Y056 (EMBL:AL646063) (108 aa) fasta scores: E(): 3.2e-37, 88.88% id in 108 aa; thioredoxin 1 1734978 trxA 3091475 trxA Burkholderia pseudomallei K96243 thioredoxin 1 YP_108117.1 1734652 R 272560 CDS YP_108118.1 53719132 3094276 1735645..1738122 1 NC_006350.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1738122 dnaX 3094276 dnaX Burkholderia pseudomallei K96243 DNA polymerase III subunits gamma and tau YP_108118.1 1735645 D 272560 CDS YP_108119.1 53719133 3092295 1738219..1738545 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1192 or rs05724 SWALL:YB92_RALSO (SWALL:Q8Y052) (115 aa) fasta scores: E(): 5.6e-29, 79.13% id in 115 aa, and to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi hypothetical protein YbaB or b0471 or z0588 or ecs0524 or stm0485 or sty0529 SWALL:YBAB_ECOLI (SWALL:P17577) (109 aa) fasta scores: E(): 9.6e-24, 67.92% id in 106 aa; hypothetical protein 1738545 3092295 BPSL1499 Burkholderia pseudomallei K96243 hypothetical protein YP_108119.1 1738219 D 272560 CDS YP_108120.1 53719134 3091893 1738571..1739179 1 NC_006350.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1739179 recR 3091893 recR Burkholderia pseudomallei K96243 recombination protein RecR YP_108120.1 1738571 D 272560 CDS YP_108121.1 53719135 3092296 1739249..1740454 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3733 SWALL:Q9HXQ9 (EMBL:AE004792) (409 aa) fasta scores: E(): 4.9e-99, 65.92% id in 402 aa, to Caulobacter crescentus hypothetical protein cc3562 SWALL:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 6.6e-76, 52.67% id in 393 aa, and to Escherichia coli crotonobetainyl-CoA:carnitine CoA-transferase CaiB or b0038 SWALL:CAIB_ECOLI (SWALL:P31572) (405 aa) fasta scores: E(): 9.8e-28, 29.52% id in 403 aa; transferase 1740454 3092296 BPSL1501 Burkholderia pseudomallei K96243 transferase YP_108121.1 1739249 D 272560 CDS YP_108122.1 53719136 3092285 1740559..1741320 1 NC_006350.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1741320 surE 3092285 surE Burkholderia pseudomallei K96243 stationary phase survival protein SurE YP_108122.1 1740559 D 272560 CDS YP_108123.1 53719137 3092558 1741317..1742285 1 NC_006350.1 Similar to full length of Ralstonia solanacearum hypothetical protein rsc1205 or rs02685 SWALL:Q8Y039 (EMBL:AL646063) (321 aa) fasta scores: E(): 3.5e-30, 54.03% id in 335 aa, and C-terminal region similar to Escherichia coli, and Escherichia coli O157:H7 protein-L-isoaspartate O-methyltransferase Pcm or b2743 or z4051 or ecs3597 SWALL:PIMT_ECOLI (SWALL:P24206) (207 aa) fasta scores: E(): 4.3e-21, 45.19% id in 208 aa; L-isoaspartate O-methyltransferase 1742285 3092558 BPSL1503 Burkholderia pseudomallei K96243 L-isoaspartate O-methyltransferase YP_108123.1 1741317 D 272560 CDS YP_108124.1 53719138 3092559 1742291..1743187 1 NC_006350.1 Similar to full length of Rhodocyclus gelatinosus NlpD protein SWALL:Q9JP90 (EMBL:AB034704) (314 aa) fasta scores: E(): 5.3e-38, 51.91% id in 314 aa, and to C-terminal region of Escherichia coli lipoprotein NlpD precursor or b2742 SWALL:NLPD_ECOLI (SWALL:P33648) (379 aa) fasta scores: E(): 1.3e-18, 42.57% id in 256 aa; peptidase 1743187 3092559 BPSL1504 Burkholderia pseudomallei K96243 peptidase YP_108124.1 1742291 D 272560 CDS YP_108125.1 53719139 3094833 1743199..1744278 1 NC_006350.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 1744278 rpoS 3094833 rpoS Burkholderia pseudomallei K96243 RNA polymerase sigma factor RpoS YP_108125.1 1743199 D 272560 CDS YP_108126.1 53719140 3094152 1744286..1745062 1 NC_006350.1 Similar to Neisseria meningitidis hypothetical protein nma1628 SWALL:Q9JTU6 (EMBL:AL162756) (264 aa) fasta scores: E(): 6.1e-65, 61.21% id in 263 aa, and to Campylobacter jejuni hypothetical protein cj1132C SWALL:Q9PNG2 (EMBL:AL139077) (264 aa) fasta scores: E(): 1.3e-26, 35.56% id in 239 aa; hypothetical protein 1745062 3094152 BPSL1506 Burkholderia pseudomallei K96243 hypothetical protein YP_108126.1 1744286 D 272560 CDS YP_108127.1 53719141 3094153 complement(1745236..1746096) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1208 or rs02691 SWALL:Q8Y036 (EMBL:AL646063) (289 aa) fasta scores: E(): 2.4e-46, 50% id in 290 aa, and to Rhizobium loti hypothetical protein mll3063 SWALL:Q98H23 (EMBL:AP003001) (302 aa) fasta scores: E(): 2e-11, 30% id in 300 aa; hypothetical protein 1746096 3094153 BPSL1507 Burkholderia pseudomallei K96243 hypothetical protein YP_108127.1 1745236 R 272560 CDS YP_108128.1 53719142 3092076 1746174..1747571 1 NC_006350.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 1747571 rumA 3092076 rumA Burkholderia pseudomallei K96243 23S rRNA 5-methyluridine methyltransferase YP_108128.1 1746174 D 272560 CDS YP_108129.1 53719143 3092077 complement(1747645..1748358) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1210 or rs02699 SWALL:Q8Y034 (EMBL:AL646063) (233 aa) fasta scores: E(): 1.1e-60, 74% id in 227 aa, and to Escherichia coli hypothetical protein YccA or b0970 SWALL:YCCA_ECOLI (SWALL:P06967) (219 aa) fasta scores: E(): 9.2e-22, 37.68% id in 207 aa; hypothetical protein 1748358 3092077 BPSL1509 Burkholderia pseudomallei K96243 hypothetical protein YP_108129.1 1747645 R 272560 CDS YP_108130.1 53719144 3091685 1748592..1749017 1 NC_006350.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1749017 ndk 3091685 ndk Burkholderia pseudomallei K96243 nucleoside diphosphate kinase YP_108130.1 1748592 D 272560 CDS YP_108131.1 53719145 3093085 1749059..1750195 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1212 or rs02704 SWALL:Q8Y032 (EMBL:AL646063) (383 aa) fasta scores: E(): 2.6e-120, 80.96% id in 373 aa, and to Escherichia coli hypothetical protein YfgB or b2517 SWALL:YFGB_ECOLI (SWALL:P36979) (384 aa) fasta scores: E(): 1e-73, 53.33% id in 375 aa; hypothetical protein 1750195 3093085 BPSL1511 Burkholderia pseudomallei K96243 hypothetical protein YP_108131.1 1749059 D 272560 CDS YP_108132.1 53719146 3093086 1750337..1751425 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1214 or rs02709 SWALL:Q8Y030 (EMBL:AL646063) (367 aa) fasta scores: E(): 5.1e-17, 34.87% id in 367 aa, and to Escherichia coli hypothetical protein YfgA or b2516 SWALL:YFGA_ECOLI (SWALL:P27434) (337 aa) fasta scores: E(): 3.3e-06, 27.85% id in 341 aa; hypothetical protein 1751425 3093086 BPSL1512 Burkholderia pseudomallei K96243 hypothetical protein YP_108132.1 1750337 D 272560 CDS YP_108133.1 53719147 3094863 1751569..1752819 1 NC_006350.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1752819 ispG 3094863 ispG Burkholderia pseudomallei K96243 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_108133.1 1751569 D 272560 CDS YP_108134.1 53719148 3092128 1752838..1754178 1 NC_006350.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1754178 hisS 3092128 hisS Burkholderia pseudomallei K96243 histidyl-tRNA synthetase YP_108134.1 1752838 D 272560 CDS YP_108135.1 53719149 3094864 1754231..1754860 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1217 or rs02712 SWALL:Q8Y028 (EMBL:AL646063) (211 aa) fasta scores: E(): 2e-49, 67.61% id in 210 aa, and to Neisseria gonorrhoeae hypothetical 23.1 kDa protein in engA 5'region SWALL:YENG_NEIGO (SWALL:O87406) (209 aa) fasta scores: E(): 2.4e-13, 31.92% id in 213 aa; hypothetical protein 1754860 3094864 BPSL1515 Burkholderia pseudomallei K96243 hypothetical protein YP_108135.1 1754231 D 272560 CDS YP_108136.1 53719150 3092255 1754905..1756050 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1218 or rs02713 SWALL:Q8Y027 (EMBL:AL646063) (388 aa) fasta scores: E(): 1.5e-67, 48.78% id in 369 aa, and to Escherichia coli hypothetical protein YfgL or b2512 SWALL:YFGL_ECOLI (SWALL:P77774) (392 aa) fasta scores: E(): 7.5e-25, 31.41% id in 382 aa; hypothetical protein 1756050 3092255 BPSL1516 Burkholderia pseudomallei K96243 hypothetical protein YP_108136.1 1754905 D 272560 CDS YP_108137.1 53719151 3092256 1756326..1757663 1 NC_006350.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1757663 engA 3092256 engA Burkholderia pseudomallei K96243 GTP-binding protein EngA YP_108137.1 1756326 D 272560 CDS YP_108138.1 53719152 3092453 1757798..1758037 1 NC_006350.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1758037 hfq 3092453 hfq Burkholderia pseudomallei K96243 RNA-binding protein Hfq YP_108138.1 1757798 D 272560 CDS YP_108139.1 53719153 3092452 1758094..1759272 1 NC_006350.1 Similar to Escherichia coli GTP-binding protein HflX or b4173 SWALL:HFLX_ECOLI (SWALL:P25519) (426 aa) fasta scores: E(): 1.1e-64, 56.06% id in 371 aa, and to Ralstonia solanacearum hypothetical protein rsc1221 or rs02723 SWALL:Q8Y024 (EMBL:AL646063) (417 aa) fasta scores: E(): 9.4e-83, 67.97% id in 356 aa, and to; GTP-binding protein 1759272 hflX 3092452 hflX Burkholderia pseudomallei K96243 GTP-binding protein YP_108139.1 1758094 D 272560 CDS YP_108140.1 53719154 3094639 1759318..1760667 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 HflK protein or HflA or b4174 or z5781 or ecs5150 SWALL:HFLK_ECOLI (SWALL:P25662) (419 aa) fasta scores: E(): 9.1e-23, 32.07% id in 424 aa, and to Ralstonia solanacearum hypothetical transmembrane protein rsc1222 or rs02724 SWALL:Q8Y023 (EMBL:AL646063) (447 aa) fasta scores: E(): 2.6e-49, 49.55% id in 450 aa; hypothetical protein 1760667 3094639 BPSL1520 Burkholderia pseudomallei K96243 hypothetical protein YP_108140.1 1759318 D 272560 CDS YP_108141.1 53719155 3094640 1760684..1761583 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 HflC protein or HflA or b4175 or z5782 or ecs5151 SWALL:HFLC_ECOLI (SWALL:P25661) (334 aa) fasta scores: E(): 3.3e-16, 35.45% id in 330 aa, and to Ralstonia solanacearum serine protease transmembrane protein rsc1223 or rs02730 SWALL:Q8Y022 (EMBL:AL646063) (304 aa) fasta scores: E(): 5.7e-38, 44.07% id in 304 aa; hypothetical protein 1761583 3094640 BPSL1521 Burkholderia pseudomallei K96243 hypothetical protein YP_108141.1 1760684 D 272560 CDS YP_108142.1 53719156 3092400 1761608..1761799 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1224 or rs02731 SWALL:Q8Y021 (EMBL:AL646063) (66 aa) fasta scores: E(): 4.7e-06, 44.64% id in 56 aa, and to Yersinia pestis membrane protein ypo0377 SWALL:Q8ZIV8 (EMBL:AJ414142) (66 aa) fasta scores: E(): 0.003, 33.33% id in 60 aa; hypothetical protein 1761799 3092400 BPSL1522 Burkholderia pseudomallei K96243 hypothetical protein YP_108142.1 1761608 D 272560 CDS YP_108143.1 53719157 3092401 1761911..1763059 1 NC_006350.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 1763059 hisZ 3092401 hisZ Burkholderia pseudomallei K96243 ATP phosphoribosyltransferase YP_108143.1 1761911 D 272560 CDS YP_108144.1 53719158 3093829 1763184..1764530 1 NC_006350.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 1764530 purA 3093829 purA Burkholderia pseudomallei K96243 adenylosuccinate synthetase YP_108144.1 1763184 D 272560 CDS YP_108145.1 53719159 3092311 1764567..1765130 1 NC_006350.1 Similar to Ralstonia solanacearum nucleotide phosphoribosyltransferase rsc1227 or rs02734 SWALL:Q8Y018 (EMBL:AL646063) (193 aa) fasta scores: E(): 4.9e-62, 82.77% id in 180 aa, and to Haemophilus influenzae xanthine-guanine phosphoribosyltransferase (GptA or XgpRT-A or hi0674) and (gptb or xgprt-b or hi0692) SWALL:XGPT_HAEIN (SWALL:P43859) (155 aa) fasta scores: E(): 0.0031, 31.41% id in 156 aa; nucleotide phosphoribosyltransferase 1765130 3092311 BPSL1525 Burkholderia pseudomallei K96243 nucleotide phosphoribosyltransferase YP_108145.1 1764567 D 272560 CDS YP_108146.1 53719160 3091956 1765422..1767314 1 NC_006350.1 Similar to Escherichia coli kup system potassium uptake protein Kup or TrkD or b3747 SWALL:KUP_ECOLI (SWALL:P30016) (622 aa) fasta scores: E(): 4.9e-119, 49.67% id in 624 aa, and to Ralstonia solanacearum probable potassium uptake transmembrane protein rsc1621 or rs03984 SWALL:Q8XYY5 (EMBL:AL646065) (633 aa) fasta scores: E(): 1.8e-167, 68.26% id in 624 aa; kup system potassium uptake protein 1767314 kup 3091956 kup Burkholderia pseudomallei K96243 kup system potassium uptake protein YP_108146.1 1765422 D 272560 CDS YP_108147.1 53719161 3091541 complement(1767550..1769874) 1 NC_006350.1 Similar to Bordetella pertussis Tex protein SWALL:TEX_BORPE (SWALL:Q45388) (791 aa) fasta scores: E(): 1.2e-179, 64.38% id in 775 aa, and to Ralstonia solanacearum transcription accessory protein rsc1623 or rs03986 SWALL:Q8XYY3 (EMBL:AL646065) (779 aa) fasta scores: E(): 0, 78.16% id in 783 aa; transcription accessory protein 1769874 tex 3091541 tex Burkholderia pseudomallei K96243 transcription accessory protein YP_108147.1 1767550 R 272560 CDS YP_108148.1 53719162 3092312 1770014..1770763 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein RSC1624or RS03987 SWALL:Q8XYY2 (EMBL:AL646065) (253 aa) fasta scores: E(): 9.7e-23, 43.29% id in 231 aa; hypothetical protein 1770763 3092312 BPSL1528 Burkholderia pseudomallei K96243 hypothetical protein YP_108148.1 1770014 D 272560 CDS YP_108149.1 53719163 3091985 1770872..1771087 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1625 or rs03988 SWALL:Q8XYY1 (EMBL:AL646065) (67 aa) fasta scores: E(): 0.0064, 46.29% id in 54 aa, and to Xanthomonas axonopodis hypothetical protein xac4268 SWALL:AAM39103 (EMBL:AE012079) (72 aa) fasta scores: E(): 0.026, 36.98% id in 73 aa; hypothetical protein 1771087 3091985 BPSL1529 Burkholderia pseudomallei K96243 hypothetical protein YP_108149.1 1770872 D 272560 CDS YP_108150.1 53719164 3091986 1771348..1773408 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-dependent DNA helicase-related protein rsc1626 or rs03989 SWALL:Q8XYY0 (EMBL:AL646065) (713 aa) fasta scores: E(): 1.2e-174, 71.71% id in 640 aa, and to Escherichia coli probable ATP-dependent helicase YoaA or b1808 SWALL:YOAA_ECOLI (SWALL:P76257) (636 aa) fasta scores: E(): 1.4e-41, 45.26% id in 623 aa; ATP-dependent DNA helicase-like protein 1773408 3091986 BPSL1530 Burkholderia pseudomallei K96243 ATP-dependent DNA helicase-like protein YP_108150.1 1771348 D 272560 CDS YP_108151.1 53719165 3091887 complement(1773584..1774408) 1 NC_006350.1 Similar to Neisseria meningitidis competence lipoprotein coml precursor ComL or nma0907 SWALL:COML_NEIMA (SWALL:Q9JVB7) (267 aa) fasta scores: E(): 5e-41, 44.35% id in 257 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical lipoprotein precursor YfiO or b2595 or z3889 or ecs3458 SWALL:YFIO_ECOLI (SWALL:P77146) (245 aa) fasta scores: E(): 1.7e-27, 36.13% id in 238 aa; lipoprotein 1774408 3091887 BPSL1531 Burkholderia pseudomallei K96243 lipoprotein YP_108151.1 1773584 R 272560 CDS YP_108152.1 53719166 3091888 1774462..1775649 1 NC_006350.1 Similar to Escherichia coli ribosomal large subunit pseudouridine synthase D RluD SWALL:RLUD_ECOLI (SWALL:P33643) (325 aa) fasta scores: E(): 1.1e-46, 48.57% id in 315 aa, and to Ralstonia solanacearum ribosomal large subunit pseudouridine synthase D RluD SWALL:RLUD_RALSO (SWALL:Q8XYX8) (358 aa) fasta scores: E(): 1.7e-76, 63.2% id in 356 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site after codon 60; ribosomal large subunit pseudouridine synthase D 1775649 3091888 BPSL1532 Burkholderia pseudomallei K96243 ribosomal large subunit pseudouridine synthase D YP_108152.1 1774462 D 272560 CDS YP_108153.1 53719167 3091518 1775662..1776492 1 NC_006350.1 Similar to Escherichia coli hypothetical protein YfiH or b2593 SWALL:YFIH_ECOLI (SWALL:P33644) (243 aa) fasta scores: E(): 9.1e-23, 50.74% id in 270 aa, and to Ralstonia solanacearum hypothetical protein rsc1629 or rs03992 SWALL:Q8XYX7 (EMBL:AL646065) (267 aa) fasta scores: E(): 5.1e-43, 59.55% id in 272 aa; hypothetical protein 1776492 3091518 BPSL1533 Burkholderia pseudomallei K96243 hypothetical protein YP_108153.1 1775662 D 272560 CDS YP_108154.1 53719168 3093057 1777009..1778814 1 NC_006350.1 Similar to Alcaligenes eutrophus poly-beta-hydroxybutyrate polymerase PhbC SWALL:PHBC_ALCEU (SWALL:P23608) (589 aa) fasta scores: E(): 7.2e-130, 61.63% id in 589 aa, and to Burkholderia sp. DSMZ 9242 PhaC SWALL:Q9RB82 (EMBL:AF153086) (625 aa) fasta scores: E(): 1.4e-188, 82.89% id in 602 aa; poly-beta-hydroxybutyrate polymerase 1778814 phbC 3093057 phbC Burkholderia pseudomallei K96243 poly-beta-hydroxybutyrate polymerase YP_108154.1 1777009 D 272560 CDS YP_108155.1 53719169 3094224 1778911..1780092 1 NC_006350.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 1780092 phbA 3094224 phbA Burkholderia pseudomallei K96243 acetyl-CoA acetyltransferase YP_108155.1 1778911 D 272560 CDS YP_108156.1 53719170 3093056 1780218..1780958 1 NC_006350.1 catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; acetyacetyl-CoA reductase 1780958 phbB 3093056 phbB Burkholderia pseudomallei K96243 acetyacetyl-CoA reductase YP_108156.1 1780218 D 272560 CDS YP_108157.1 53719171 3091519 1781095..1781667 1 NC_006350.1 Similar to Burkholderia sp. DSMZ 9242 hypothetical 21.8 kDa protein SWALL:Q9RB79 (EMBL:AF153086) (188 aa) fasta scores: E(): 1e-61, 92.1% id in 190 aa, and to Thiocystis violacea hypothetical protein in phbA 5'region SWALL:YPH4_THIVI (SWALL:P45368) (138 aa) fasta scores: E(): 1.1e-19, 54.54% id in 132 aa; hypothetical protein 1781667 3091519 BPSL1537 Burkholderia pseudomallei K96243 hypothetical protein YP_108157.1 1781095 D 272560 CDS YP_108158.1 53719172 3093910 1782265..1783644 1 NC_006350.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 1783644 rimO 3093910 rimO Burkholderia pseudomallei K96243 ribosomal protein S12 methylthiotransferase YP_108158.1 1782265 D 272560 CDS YP_108159.1 53719173 3093911 1783647..1784573 1 NC_006350.1 Similar to Klebsiella pneumoniae fructokinase ScrK SWALL:SCRK_KLEPN (SWALL:P26420) (307 aa) fasta scores: E(): 4.2e-19, 31.49% id in 308 aa, and to Pseudomonas putida fructokinase-like protein ORF5 SWALL:BAB96556 (EMBL:AB085816) (307 aa) fasta scores: E(): 5.3e-90, 78.07% id in 301 aa; fructokinase-like protein 1784573 3093911 BPSL1539 Burkholderia pseudomallei K96243 fructokinase-like protein YP_108159.1 1783647 D 272560 CDS YP_108160.1 53719174 3093104 1784669..1785853 1 NC_006350.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 1785853 3093104 BPSL1540 Burkholderia pseudomallei K96243 beta-ketothiolase YP_108160.1 1784669 D 272560 CDS YP_108161.1 53719175 3093105 1785870..1786451 1 NC_006350.1 Very low similarity to Ralstonia solanacearum signal peptide protein rsc1638 or rs04012 SWALL:Q8XYW8 (EMBL:AL646065) (245 aa) fasta scores: E(): 8.1e-06, 35.18% id in 162 aa; hypothetical protein 1786451 3093105 BPSL1541 Burkholderia pseudomallei K96243 hypothetical protein YP_108161.1 1785870 D 272560 CDS YP_108162.1 53719176 3092176 1786752..1787936 1 NC_006350.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 1787936 3092176 BPSL1542 Burkholderia pseudomallei K96243 cystathionine beta-lyase YP_108162.1 1786752 D 272560 CDS YP_108163.1 53719177 3092177 complement(1788200..1789045) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 phosphoserine phosphatase SerB or b4388 or z5989 or ecs5346 SWALL:SERB_ECOLI (SWALL:P06862) (322 aa) fasta scores: E(): 1.6e-26, 41.72% id in 266 aa, and to Neisseria meningitidis phosphoserine phosphatase nma1179 SWALL:Q9JUR1 (EMBL:AL162755) (277 aa) fasta scores: E(): 2.1e-35, 47.6% id in 250 aa; phosphoserine phosphatase 1789045 3092177 BPSL1543 Burkholderia pseudomallei K96243 phosphoserine phosphatase YP_108163.1 1788200 R 272560 CDS YP_108164.1 53719178 3093861 1789902..1790447 1 NC_006350.1 hypothetical protein 1790447 3093861 BPSL1544 Burkholderia pseudomallei K96243 hypothetical protein YP_108164.1 1789902 D 272560 CDS YP_108165.1 53719179 3093862 complement(1791212..1792030) 1 NC_006350.1 Similar to Escherichia coli hypothetical protein YbbM or b0491 SWALL:YBBM_ECOLI (SWALL:P77307) (259 aa) fasta scores: E(): 1.3e-20, 28.3% id in 265 aa, and to Ralstonia solanacearum probable transmembrane protein rsc0748 or rs05105 SWALL:Q8Y1E2 (EMBL:AL646060) (272 aa) fasta scores: E(): 2.6e-63, 68.32% id in 262 aa; ABC transporter membrane protein 1792030 3093862 BPSL1545 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_108165.1 1791212 R 272560 CDS YP_108166.1 53719180 3093241 complement(1792027..1792722) 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc0749 or rs05104 SWALL:Q8Y1E1 (EMBL:AL646060) (230 aa) fasta scores: E(): 4.1e-34, 54.5% id in 222 aa, and to Salmonella typhi ABC transporter ATP-binding protein sty0548 SWALL:Q8Z8S1 (EMBL:AL627267) (225 aa) fasta scores: E(): 2.5e-11, 33.04% id in 227 aa; ABC transporter ATP-binding protein 1792722 3093241 BPSL1546 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_108166.1 1792027 R 272560 CDS YP_108167.1 53719181 3093242 1792856..1795330 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0773 or rs05081 SWALL:Q8Y1B7 (EMBL:AL646061) (740 aa) fasta scores: E(): 3e-79, 44.84% id in 814 aa, and to Yersinia pestis exported protein ypo3987 SWALL:Q8ZA33 (EMBL:AJ414160) (740 aa) fasta scores: E(): 2.1e-69, 39.63% id in 820 aa. Note: It contains a region from approx. residue 200 to approx. residue 350 with very little or no similarities to database entries; hypothetical protein 1795330 3093242 BPSL1547 Burkholderia pseudomallei K96243 hypothetical protein YP_108167.1 1792856 D 272560 CDS YP_108168.1 53719182 3093243 1795789..1797381 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical ABC transporter ATP-binding protein YbiT or b0820 or z1042 or ecs0897 SWALL:YBIT_ECOLI (SWALL:P75790) (530 aa) fasta scores: E(): 4.7e-115, 66.66% id in 531 aa, and to Salmonella typhi ABC transporter ATP-binding protein sty0879 SWALL:Q8Z870 (EMBL:AL627268) (531 aa) fasta scores: E(): 3.7e-115, 67.04% id in 531 aa; ABC transporter ATP-binding protein 1797381 3093243 BPSL1548 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_108168.1 1795789 D 272560 CDS YP_108169.1 53719183 3093244 complement(1797528..1798163) 1 NC_006350.1 hypothetical protein 1798163 3093244 BPSL1549 Burkholderia pseudomallei K96243 hypothetical protein YP_108169.1 1797528 R 272560 CDS YP_108170.1 53719184 3094163 1798479..1799915 1 NC_006350.1 Similar to Bacillus subtilis betaine aldehyde dehydrogenase GbsA SWALL:DHAB_BACSU (SWALL:P71016) (490 aa) fasta scores: E(): 1.9e-59, 40.33% id in 476 aa, and to Ralstonia solanacearum betaine aldehyde dehydrogenase rsc1456 or rs03851 SWALL:Q8XZE5 (EMBL:AL646064) (478 aa) fasta scores: E(): 1.1e-127, 71.3% id in 474 aa; betaine aldehyde dehydrogenase 1799915 3094163 BPSL1550 Burkholderia pseudomallei K96243 betaine aldehyde dehydrogenase YP_108170.1 1798479 D 272560 CDS YP_108171.1 53719185 3094164 1800114..1801304 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0114 or rs00984 SWALL:Q8Y367 (EMBL:AL646057) (402 aa) fasta scores: E(): 8.7e-90, 63.54% id in 384 aa, and to Fusobacterium nucleatum 2-nitropropane dioxygenase fn0664 SWALL:Q8RFM8 (EMBL:AE010577) (382 aa) fasta scores: E(): 3e-31, 37.22% id in 368 aa; 2-nitropropane dioxygenase 1801304 3094164 BPSL1551 Burkholderia pseudomallei K96243 2-nitropropane dioxygenase YP_108171.1 1800114 D 272560 CDS YP_108172.1 53719186 3093192 1801377..1802021 1 NC_006350.1 Similar to Escherichia coli outer membrane protein W precursor OmpW or b1256 SWALL:OMPW_ECOLI (SWALL:P21364) (212 aa) fasta scores: E(): 7.9e-17, 38.27% id in 209 aa, to Vibrio cholerae outer membrane protein W precursor OmpW or vca0867 SWALL:OMPW_VIBCH (SWALL:P17266) (217 aa) fasta scores: E(): 2.7e-13, 32.55% id in 215 aa, and to Rhizobium sp. hypothetical outer-membrane protein Y4mB precursor SWALL:Y4MB_RHISN (SWALL:P55561) (229 aa) fasta scores: E(): 9.8e-22, 38.09% id in 231 aa; outer membrane protein 1802021 3093192 BPSL1552 Burkholderia pseudomallei K96243 outer membrane protein YP_108172.1 1801377 D 272560 CDS YP_108173.1 53719187 3093193 complement(1802147..1802350) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1457 or rs03850 SWALL:Q8XZE4 (EMBL:AL646064) (91 aa) fasta scores: E(): 3.6e-18, 67.18% id in 64 aa, and to Pseudomonas aeruginosa hypothetical protein pa1788 SWALL:Q9I2V4 (EMBL:AE004604) (155 aa) fasta scores: E(): 3.7e-06, 50% id in 44 aa; hypothetical protein 1802350 3093193 BPSL1553 Burkholderia pseudomallei K96243 hypothetical protein YP_108173.1 1802147 R 272560 CDS YP_108174.1 53719188 3092464 complement(1802768..1804075) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 manganese transport protein MntH or b2392 or z3658 or ecs3271 SWALL:MNTH_ECOLI (SWALL:P77145) (412 aa) fasta scores: E(): 1.6e-41, 37.82% id in 423 aa, and to Pseudomonas aeruginosa manganese transport protein pa0809 SWALL:MNT2_PSEAE (SWALL:Q9RPF2) (438 aa) fasta scores: E(): 6.3e-73, 51.28% id in 427 aa; metal-ion transport system, membrane protein 1804075 3092464 BPSL1554 Burkholderia pseudomallei K96243 metal-ion transport system, membrane protein YP_108174.1 1802768 R 272560 CDS YP_108175.1 53719189 3091817 1804461..1805555 1 NC_006350.1 Similar to Escherichia coli putrescine-binding periplasmic protein precursor PotF or b0854 SWALL:POTF_ECOLI (SWALL:P31133) (370 aa) fasta scores: E(): 8.8e-71, 51.93% id in 362 aa, and to Xanthomonas campestris periplasmic putrescine-binding protein, permease xcc2344 SWALL:AAM41622 (EMBL:AE012342) (371 aa) fasta scores: E(): 3e-73, 51.66% id in 360 aa; putrescine-binding periplasmic protein 1805555 potF 3091817 potF Burkholderia pseudomallei K96243 putrescine-binding periplasmic protein YP_108175.1 1804461 D 272560 CDS YP_108176.1 53719190 3091818 1805670..1806806 1 NC_006350.1 Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 5.1e-70, 55.4% id in 370 aa, and to Neisseria meningitidis spermidine/putrescine ABC transporter ATP-binding protein nmb0610 SWALL:Q9K0I9 (EMBL:AE002416) (419 aa) fasta scores: E(): 1e-73, 57.02% id in 356 aa; putrescine transport ATP-binding protein 1806806 potG 3091818 potG Burkholderia pseudomallei K96243 putrescine transport ATP-binding protein YP_108176.1 1805670 D 272560 CDS YP_108177.1 53719191 3092751 1806803..1807732 1 NC_006350.1 Similar to Escherichia coli putrescine transport system permease PotH or b0856 SWALL:POTH_ECOLI (SWALL:P31135) (317 aa) fasta scores: E(): 3.3e-68, 59.85% id in 284 aa, and to Xanthomonas axonopodis polyamine transport protein xac2471 SWALL:AAM37322 (EMBL:AE011884) (288 aa) fasta scores: E(): 2e-69, 62.1% id in 285 aa; putrescine transport system permease 1807732 potH 3092751 potH Burkholderia pseudomallei K96243 putrescine transport system permease YP_108177.1 1806803 D 272560 CDS YP_108178.1 53719192 3092752 1807729..1808547 1 NC_006350.1 Similar to Escherichia coli putrescine transport system permease PotI or b0857 SWALL:POTI_ECOLI (SWALL:P31136) (281 aa) fasta scores: E(): 6.8e-60, 59% id in 261 aa, and to Yersinia pestis putrescine transport system permease ypo1334 SWALL:Q8ZGG3 (EMBL:AJ414147) (281 aa) fasta scores: E(): 3.5e-59, 56.7% id in 261 aa; putrescine transport system permease 1808547 potI 3092752 potI Burkholderia pseudomallei K96243 putrescine transport system permease YP_108178.1 1807729 D 272560 CDS YP_108179.1 53719193 3092465 complement(1808802..1809608) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1541 or rs03761 SWALL:Q8XZ63 (EMBL:AL646065) (273 aa) fasta scores: E(): 2.3e-36, 49.62% id in 266 aa, and to Synechocystis sp. hypothetical protein slr1262 SWALL:P73802 (EMBL:D90909) (288 aa) fasta scores: E(): 6.1e-17, 32.45% id in 265 aa; hypothetical protein 1809608 3092465 BPSL1559 Burkholderia pseudomallei K96243 hypothetical protein YP_108179.1 1808802 R 272560 CDS YP_108180.1 53719194 3092114 complement(1809648..1811318) 1 NC_006350.1 C-terminal region similar to Pseudomonas aeruginosa hypothetical protein pa2345 SWALL:Q9I1D3 (EMBL:AE004660) (411 aa) fasta scores: E(): 2.1e-93, 59.66% id in 414 aa, and N-terminal region to Rhodobacter capsulatus hypothetical protein SWALL:O33514 (EMBL:U23145) (146 aa) fasta scores: E(): 1.6e-13, 42.17% id in 147 aa. Posible fusion protein; hypothetical protein 1811318 3092114 BPSL1560 Burkholderia pseudomallei K96243 hypothetical protein YP_108180.1 1809648 R 272560 CDS YP_108181.1 53719195 3092115 complement(1811369..1812292) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1544 or rs05231 SWALL:Q8XZ60 (EMBL:AL646065) (286 aa) fasta scores: E(): 1.8e-36, 61.3% id in 292 aa, and to Caulobacter crescentus metallo-beta-lactamase cc2866 SWALL:Q9A4G8 (EMBL:AE005951) (267 aa) fasta scores: E(): 2.1e-28, 53.43% id in 277 aa; metallo-beta-lactamase 1812292 3092115 BPSL1561 Burkholderia pseudomallei K96243 metallo-beta-lactamase YP_108181.1 1811369 R 272560 CDS YP_108182.1 53719196 3092373 1812459..1813862 1 NC_006350.1 C-terminal region similar to Escherichia coli formate hydrogenlyase transcriptional activator FhlA or b2731 SWALL:FHLA_ECOLI (SWALL:P19323) (692 aa) fasta scores: E(): 8e-38, 41.69% id in 331 aa, and to Thiobacillus denitrificans transcription regulator SWALL:AAM52226 (EMBL:AY112701) (302 aa) fasta scores: E(): 5e-43, 48% id in 300 aa. Note: N-terminal region (first 100 residues approx.) seems not to have similarities with any database entries; transcriptional regulatory protein 1813862 3092373 BPSL1562 Burkholderia pseudomallei K96243 transcriptional regulatory protein YP_108182.1 1812459 D 272560 CDS YP_108183.1 53719197 3092374 1814175..1814738 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2784 SWALL:Q9I059 (EMBL:AE004706) (185 aa) fasta scores: E(): 3e-30, 51.06% id in 188 aa; hypothetical protein 1814738 3092374 BPSL1563 Burkholderia pseudomallei K96243 hypothetical protein YP_108183.1 1814175 D 272560 CDS YP_108184.1 53719198 3094735 1814749..1814973 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2785 SWALL:Q9I058 (EMBL:AE004706) (72 aa) fasta scores: E(): 3.1e-19, 78.26% id in 69 aa, and to Caulobacter crescentus transcriptional regulator, cro/ci family cc3270 SWALL:Q9A3D4 (EMBL:AE005990) (75 aa) fasta scores: E(): 4.1e-16, 67.56% id in 74 aa; transcriptional regulatory protein 1814973 3094735 BPSL1564 Burkholderia pseudomallei K96243 transcriptional regulatory protein YP_108184.1 1814749 D 272560 CDS YP_008992007.1 568335726 18093823 1814995..1815807 1 NC_006350.1 hypothetical protein 1815807 18093823 BPSL1564b Burkholderia pseudomallei K96243 hypothetical protein YP_008992007.1 1814995 D 272560 CDS YP_108185.1 53719199 3094736 complement(1816314..1817363) 1 NC_006350.1 Similar to Bradyrhizobium elkanii nodulation protein NolA SWALL:NOLA_BRAEL (SWALL:P50329) (219 aa) fasta scores: E(): 2.1e-14, 31.27% id in 227 aa, and to Streptomyces coelicolor transcriptional regulator sco5962 or sc7h1.32C SWALL:O54191 (EMBL:AL021411) (196 aa) fasta scores: E(): 7.9e-14, 39.32% id in 178 aa, and C-terminal region similar to full length of Klebsiella oxytoca albicidin resistance protein SWALL:ALBR_KLEOX (SWALL:P10488) (218 aa) fasta scores: E(): 7e-13, 30.66% id in 212 aa; MerR family transcriptional regulator 1817363 3094736 BPSL1565 Burkholderia pseudomallei K96243 MerR family transcriptional regulator YP_108185.1 1816314 R 272560 CDS YP_108186.1 53719200 3093978 complement(1817818..1819722) 1 NC_006350.1 Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 3.4e-21, 30.43% id in 483 aa, and to Ralstonia solanacearum probable outer membrane channel lipoprotein rsc0166 or rs01036 SWALL:Q8Y315 (EMBL:AL646057) (480 aa) fasta scores: E(): 1.1e-51, 45.2% id in 480 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; outer membrane lipoprotein 1819722 3093978 BPSL1566 Burkholderia pseudomallei K96243 outer membrane lipoprotein YP_108186.1 1817818 R 272560 CDS YP_108187.1 53719201 3093979 complement(1819725..1822895) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane drug efflux protein rsc1654 or rs05828 SWALL:Q8XYV2 (EMBL:AL646065) (1039 aa) fasta scores: E(): 2.4e-160, 51.37% id in 1057 aa, and to Escherichia coli acriflavine resistance protein F AcrF or EnvD or b3266 SWALL:ACRF_ECOLI (SWALL:P24181) (1034 aa) fasta scores: E(): 3.3e-45, 24.55% id in 1071 aa; drug-resistance cell envelope-like protein 1822895 3093979 BPSL1567 Burkholderia pseudomallei K96243 drug-resistance cell envelope-like protein YP_108187.1 1819725 R 272560 CDS YP_108188.1 53719202 3094780 complement(1822892..1824007) 1 NC_006350.1 Similar to Rhizobium loti component of multidrug efflux system mlr7297 SWALL:Q986M0 (EMBL:AP003011) (380 aa) fasta scores: E(): 2.8e-29, 35.97% id in 353 aa, and to Rhizobium loti rnd efflux membrane fusion protein mll5519 SWALL:Q98BL6 (EMBL:AP003006) (356 aa) fasta scores: E(): 1.4e-28, 35.53% id in 363 aa; lipoprotein 1824007 3094780 BPSL1568 Burkholderia pseudomallei K96243 lipoprotein YP_108188.1 1822892 R 272560 CDS YP_108189.1 53719203 3094781 1824198..1824836 1 NC_006350.1 Similar to Caulobacter crescentus transcriptional regulator, TetR family cc0732 SWALL:Q9AA74 (EMBL:AE005748) (215 aa) fasta scores: E(): 1.3e-06, 38.46% id in 91 aa, and to Streptomyces coelicolor TetR-family regulator sco7303 or sc5f8.13 SWALL:Q9K4L1 (EMBL:AL357613) (193 aa) fasta scores: E(): 3.2e-05, 30.5% id in 177 aa; TetR family regulatory protein 1824836 3094781 BPSL1569 Burkholderia pseudomallei K96243 TetR family regulatory protein YP_108189.1 1824198 D 272560 CDS YP_108190.1 53719204 3094589 complement(1825126..1826961) 1 NC_006350.1 Similar to Salmonella typhimurium voltage-gated clc-type chloride channel EriC or stm0203 SWALL:ERIC_SALTY (SWALL:Q8ZRP8) (473 aa) fasta scores: E(): 1.8e-25, 28.38% id in 458 aa, and to Ralstonia solanacearum chloride channel protein eric-like rsp0020 or rs01992 SWALL:ERIL_RALSO (SWALL:Q8XTT4) (461 aa) fasta scores: E(): 2.9e-85, 54.56% id in 438 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; voltage-gated ClC-type chloride channel ClcB 1826961 3094589 BPSL1570 Burkholderia pseudomallei K96243 voltage-gated ClC-type chloride channel ClcB YP_108190.1 1825126 R 272560 CDS YP_108191.1 53719205 3094590 complement(1826975..1828045) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YeiH or b2158 or z3415 or ecs3050 SWALL:YEIH_ECOLI (SWALL:P33019) (349 aa) fasta scores: E(): 1.1e-39, 37.79% id in 336 aa, and to Pseudomonas aeruginosa hypothetical protein pa5383 SWALL:Q9HTI1 (EMBL:AE004951) (355 aa) fasta scores: E(): 3.7e-44, 44.51% id in 328 aa; hypothetical protein 1828045 3094590 BPSL1571 Burkholderia pseudomallei K96243 hypothetical protein YP_108191.1 1826975 R 272560 CDS YP_108192.1 53719206 3091969 1828156..1829058 1 NC_006350.1 Similar to Thiobacillus denitrificans CbbR SWALL:Q9APD4 (EMBL:AF307090) (316 aa) fasta scores: E(): 1e-21, 32.65% id in 297 aa, and to Chromatium vinosum rubisco operon transcriptional regulator RbcR SWALL:RBCR_CHRVI (SWALL:P25544) (302 aa) fasta scores: E(): 1e-20, 32.99% id in 297 aa; LysR family transcriptional regulator 1829058 3091969 BPSL1572 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108192.1 1828156 D 272560 CDS YP_108193.1 53719207 3091970 complement(1829120..1829566) 1 NC_006350.1 hypothetical protein 1829566 3091970 BPSL1573 Burkholderia pseudomallei K96243 hypothetical protein YP_108193.1 1829120 R 272560 CDS YP_108194.1 53719208 3093366 1829790..1830554 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2260 or KguE SWALL:Q9I1L3 (EMBL:AE004652) (260 aa) fasta scores: E(): 2.3e-17, 36.36% id in 253 aa; hypothetical protein 1830554 3093366 BPSL1574 Burkholderia pseudomallei K96243 hypothetical protein YP_108194.1 1829790 D 272560 CDS YP_108195.1 53719209 3093367 1830638..1831627 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable 2-ketogluconate kinase pa2261 SWALL:Q9I1L2 (EMBL:AE004652) (316 aa) fasta scores: E(): 3.5e-65, 61.81% id in 309 aa, and to Klebsiella pneumoniae fructokinase ScrK SWALL:SCRK_KLEPN (SWALL:P26420) (307 aa) fasta scores: E(): 1.4e-14, 33.1% id in 287 aa; sugar kinase 1831627 3093367 BPSL1575 Burkholderia pseudomallei K96243 sugar kinase YP_108195.1 1830638 D 272560 CDS YP_108196.1 53719210 3092376 1831712..1832989 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable 2-ketogluconate transporter pa2262 or KguT SWALL:Q9I1L1 (EMBL:AE004652) (435 aa) fasta scores: E(): 5.4e-116, 73.2% id in 403 aa, and to Yersinia pestis sugar transporter ypo2535 SWALL:Q8ZDM7 (EMBL:AJ414152) (443 aa) fasta scores: E(): 1.4e-45, 34.53% id in 417 aa; transport related membrane protein 1832989 3092376 BPSL1576 Burkholderia pseudomallei K96243 transport related membrane protein YP_108196.1 1831712 D 272560 CDS YP_108197.1 53719211 3094802 1832994..1833971 1 NC_006350.1 Similar to Erwinia herbicola 2-ketogluconate reductase TkrA SWALL:TKRA_ERWHE (SWALL:P58000) (323 aa) fasta scores: E(): 3.7e-57, 54.79% id in 323 aa, and to Yersinia pestis D-isomer specific 2-hydroxyacid dehydrogenase ypo4078 SWALL:Q8Z9W1 (EMBL:AJ414160) (326 aa) fasta scores: E(): 5.6e-64, 58.51% id in 323 aa; 2-ketogluconate reductase 1833971 tkrA 3094802 tkrA Burkholderia pseudomallei K96243 2-ketogluconate reductase YP_108197.1 1832994 D 272560 CDS YP_108198.1 53719212 3092377 1834579..1835622 1 NC_006350.1 Similar to Bacillus subtilis kdg operon repressor KdgR SWALL:KDGR_BACSU (SWALL:P50844) (339 aa) fasta scores: E(): 2.6e-32, 33.83% id in 334 aa, and to Clostridium acetobutylicum kdg operon repressor cac0393 SWALL:Q97M07 (EMBL:AE007554) (344 aa) fasta scores: E(): 1.8e-28, 32.94% id in 343 aa; LacI family transcriptional regulator 1835622 3092377 BPSL1578 Burkholderia pseudomallei K96243 LacI family transcriptional regulator YP_108198.1 1834579 D 272560 CDS YP_108199.1 53719213 3093531 1835680..1836468 1 NC_006350.1 Similar to Ralstonia solanacearum lipoprotein transmembrane rsp0010 or rs01982 SWALL:Q8XTU4 (EMBL:AL646076) (265 aa) fasta scores: E(): 1.8e-29, 39.39% id in 264 aa, and to Streptococcus pneumoniae R6 conserved hypothetical protein spr1248 SWALL:AAL00052 (EMBL:AE008496) (250 aa) fasta scores: E(): 2.3e-12, 28.95% id in 259 aa; hypothetical protein 1836468 3093531 BPSL1579 Burkholderia pseudomallei K96243 hypothetical protein YP_108199.1 1835680 D 272560 CDS YP_108200.1 53719214 3093532 1836483..1836845 1 NC_006350.1 hypothetical protein 1836845 3093532 BPSL1580 Burkholderia pseudomallei K96243 hypothetical protein YP_108200.1 1836483 D 272560 CDS YP_108201.1 53719215 3093560 complement(1837334..1837768) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp1250 or rs03194 SWALL:Q8XQH5 (EMBL:AL646083) (147 aa) fasta scores: E(): 1.6e-40, 79.72% id in 143 aa; hypothetical protein 1837768 3093560 BPSL1581 Burkholderia pseudomallei K96243 hypothetical protein YP_108201.1 1837334 R 272560 CDS YP_108202.1 53719216 3093561 1837965..1838984 1 NC_006350.1 Similar to Comamonas acidovorans polyhydroxybutyrate depolymerase PhaZ SWALL:O05527 (EMBL:AB003186) (494 aa) fasta scores: E(): 7.1e-45, 45.69% id in 302 aa, and to Streptomyces exfoliatus poly PhaZ SWALL:Q54070 (EMBL:U58990) (488 aa) fasta scores: E(): 8.4e-32, 35.35% id in 297 aa; depolymerase 1838984 3093561 BPSL1582 Burkholderia pseudomallei K96243 depolymerase YP_108202.1 1837965 D 272560 CDS YP_108203.1 53719217 3091719 complement(1839642..1840157) 1 NC_006350.1 hypothetical protein 1840157 3091719 BPSL1583 Burkholderia pseudomallei K96243 hypothetical protein YP_108203.1 1839642 R 272560 CDS YP_108204.1 53719218 3093966 1842086..1842547 1 NC_006350.1 Similar to Pseudomonas putida transcriptional regulator SWALL:Q93FY6 (EMBL:AF302763) (153 aa) fasta scores: E(): 9.5e-33, 64% id in 150 aa, and to Rhizobium loti transcriptional regulator mll4468 SWALL:Q98E02 (EMBL:AP003004) (142 aa) fasta scores: E(): 9.4e-19, 46.8% id in 141 aa; AsnC family transcriptional regulator 1842547 3093966 BPSL1588 Burkholderia pseudomallei K96243 AsnC family transcriptional regulator YP_108204.1 1842086 D 272560 CDS YP_108205.1 53719219 3093967 1842602..1843684 1 NC_006350.1 hypothetical protein 1843684 3093967 BPSL1589 Burkholderia pseudomallei K96243 hypothetical protein YP_108205.1 1842602 D 272560 CDS YP_108206.1 53719220 3093590 complement(1843714..1844196) 1 NC_006350.1 hypothetical protein 1844196 3093590 BPSL1590 Burkholderia pseudomallei K96243 hypothetical protein YP_108206.1 1843714 R 272560 CDS YP_108207.1 53719221 3093591 1844497..1845597 1 NC_006350.1 Similar to Agrobacterium tumefaciens dehydrogenase atu0946 or agr_c_1727 SWALL:Q8UGT9 (EMBL:AE009059) (366 aa) fasta scores: E(): 1.7e-70, 54.77% id in 356 aa, and to Rhizobium meliloti hypothetical protein r03032 or smc02503 SWALL:Q92LL0 (EMBL:AL591792) (367 aa) fasta scores: E(): 2.7e-68, 52.52% id in 356 aa; hypothetical protein 1845597 3093591 BPSL1591 Burkholderia pseudomallei K96243 hypothetical protein YP_108207.1 1844497 D 272560 CDS YP_108208.1 53719222 3093904 complement(1845797..1846417) 1 NC_006350.1 Similar to Clostridium acetobutylicum predicted P-loop ATPase cac1583 SWALL:Q97IQ7 (EMBL:AE007668) (187 aa) fasta scores: E(): 3.2e-09, 32.44% id in 188 aa; ATP-ase 1846417 3093904 BPSL1592 Burkholderia pseudomallei K96243 ATP-ase YP_108208.1 1845797 R 272560 CDS YP_108209.1 53719223 3091673 1846747..1847757 1 NC_006350.1 Similar to Ralstonia solanacearum probable magnesium and cobalt transport transmembrane protein rsp0665 or rs01784 SWALL:Q8XS16 (EMBL:AL646080) (323 aa) fasta scores: E(): 4.6e-51, 44.61% id in 325 aa, and to Xanthomonas campestris magnesium and cobalt transport protein CorA or xcc2335 SWALL:AAM41613 (EMBL:AE012341) (332 aa) fasta scores: E(): 2.5e-44, 40.79% id in 326 aa; metal ion transport protein 1847757 3091673 BPSL1593 Burkholderia pseudomallei K96243 metal ion transport protein YP_108209.1 1846747 D 272560 CDS YP_108210.2 161723203 3091674 complement(1847765..1848055) 1 NC_006350.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; hypothetical protein 1848055 3091674 BPSL1594 Burkholderia pseudomallei K96243 hypothetical protein YP_108210.2 1847765 R 272560 CDS YP_108211.1 53719225 3092013 1848607..1849047 1 NC_006350.1 lipoprotein 1849047 3092013 BPSL1595 Burkholderia pseudomallei K96243 lipoprotein YP_108211.1 1848607 D 272560 CDS YP_108212.1 53719226 3092014 complement(1849709..1849972) 1 NC_006350.1 hypothetical protein 1849972 3092014 BPSL1596 Burkholderia pseudomallei K96243 hypothetical protein YP_108212.1 1849709 R 272560 CDS YP_108213.1 53719227 3094321 1850065..1850436 1 NC_006350.1 hypothetical protein 1850436 3094321 BPSL1597 Burkholderia pseudomallei K96243 hypothetical protein YP_108213.1 1850065 D 272560 CDS YP_108214.1 53719228 3094322 complement(1850780..1853209) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1408 SWALL:Q9I3T6 (EMBL:AE004570) (807 aa) fasta scores: E(): 1.7e-101, 44.54% id in 806 aa, and to Rhizobium meliloti hypothetical transmembrane protein r00938 or smc00028 SWALL:Q92RE2 (EMBL:AL591785) (871 aa) fasta scores: E(): 8.9e-50, 30.95% id in 814 aa, and to parts of Escherichia coli potassium efflux system KefA or AefA or b0465 SWALL:KEFA_ECOLI (SWALL:P77338) (1120 aa) fasta scores: E(): 8.4e-19, 26.16% id in 711 aa; transport-related, membrane protein 1853209 3094322 BPSL1598 Burkholderia pseudomallei K96243 transport-related, membrane protein YP_108214.1 1850780 R 272560 CDS YP_108215.1 53719229 3091843 complement(1853587..1855728) 1 NC_006350.1 Similar to Pseudomonas aeruginosa regulatory protein pa3391 SWALL:NSR1_PSEAE (SWALL:Q9HYL3) (715 aa) fasta scores: E(): 7.3e-71, 39.01% id in 692 aa, and to Pseudomonas stutzeri regulatory protein NosR SWALL:NOSR_PSEST (SWALL:Q00790) (724 aa) fasta scores: E(): 1e-67, 38.32% id in 694 aa; membrane linked regulatory protein 1855728 3091843 BPSL1599 Burkholderia pseudomallei K96243 membrane linked regulatory protein YP_108215.1 1853587 R 272560 CDS YP_108216.1 53719230 3091844 complement(1855778..1856272) 1 NC_006350.1 Similar to Xanthomonas axonopodis cytochrome c5 xac0273 SWALL:AAM35165 (EMBL:AE011652) (172 aa) fasta scores: E(): 2.8e-10, 42.85% id in 147 aa, and C-terminal region highly similar to Chlorobium limicola f.sp. thiosulfatophilum cytochrome c-555 SWALL:C555_CHLLT (SWALL:P00123) (86 aa) fasta scores: E(): 3.2e-07, 43.75% id in 80 aa; cytochrome c-related lipoprotein 1856272 3091844 BPSL1600 Burkholderia pseudomallei K96243 cytochrome c-related lipoprotein YP_108216.1 1855778 R 272560 CDS YP_108217.1 53719231 3094123 complement(1856294..1856698) 1 NC_006350.1 Very low similarity to Streptomyces coelicolor hypothetical protein sco1549 or scl11.05C SWALL:Q9L1D3 (EMBL:AL157953) (312 aa) fasta scores: E(): 6.6, 31.09% id in 119 aa; hypothetical protein 1856698 3094123 BPSL1601 Burkholderia pseudomallei K96243 hypothetical protein YP_108217.1 1856294 R 272560 CDS YP_108218.1 53719232 3094124 complement(1856701..1856970) 1 NC_006350.1 Very low similarity to Streptomyces coelicolor hypothetical protein sco6897 or sc1b2.03 SWALL:Q9KYD3 (EMBL:AL356812) (103 aa) fasta scores: E(): 4.7, 36.48% id in 74 aa; hypothetical protein 1856970 3094124 BPSL1602 Burkholderia pseudomallei K96243 hypothetical protein YP_108218.1 1856701 R 272560 CDS YP_108219.1 53719233 3091981 complement(1856981..1857511) 1 NC_006350.1 Similar to Ralstonia solanacearum probable NosL lipoprotein rsp1373 or rs02085 SWALL:Q8XQB3 (EMBL:AL646084) (176 aa) fasta scores: E(): 3.7e-29, 48.58% id in 177 aa, and to Pseudomonas stutzeri NosL protein precursor SWALL:Q52529 (EMBL:Z69589) (190 aa) fasta scores: E(): 2.6e-13, 36.47% id in 170 aa; lipoprotein 1857511 3091981 BPSL1603 Burkholderia pseudomallei K96243 lipoprotein YP_108219.1 1856981 R 272560 CDS YP_108220.1 53719234 3091982 complement(1857508..1858344) 1 NC_006350.1 Similar to Ralstonia solanacearum probable NosY transmembrane protein or rsp1372 or rs02086 SWALL:Q8XQB4 (EMBL:AL646084) (274 aa) fasta scores: E(): 9e-58, 62.26% id in 265 aa, and to Pseudomonas stutzeri membrane protein NosY precursor SWALL:NOSY_PSEST (SWALL:P19845) (276 aa) fasta scores: E(): 5.1e-37, 46.88% id in 273 aa; hypothetical protein 1858344 3091982 BPSL1604 Burkholderia pseudomallei K96243 hypothetical protein YP_108220.1 1857508 R 272560 CDS YP_108221.1 53719235 3091677 complement(1858341..1859255) 1 NC_006350.1 Similar to Ralstonia solanacearum probable copper ATP-binding ABC transporter protein rsp1371 or rs02087 SWALL:Q8XQB5 (EMBL:AL646084) (314 aa) fasta scores: E(): 4.5e-50, 55.77% id in 303 aa, and to Pseudomonas stutzeri copper transport ATP-binding protein NosF SWALL:NOSF_PSEST (SWALL:P19844) (308 aa) fasta scores: E(): 9.8e-35, 43.47% id in 299 aa; copper-related ABC transporter ATP-binding protein 1859255 3091677 BPSL1605 Burkholderia pseudomallei K96243 copper-related ABC transporter ATP-binding protein YP_108221.1 1858341 R 272560 CDS YP_108222.1 53719236 3091678 complement(1859252..1860502) 1 NC_006350.1 Similar to Ralstonia solanacearum probable copper-binding periplasmic signal peptide protein rsp1370 or rs02088 SWALL:Q8XQB6 (EMBL:AL646084) (423 aa) fasta scores: E(): 2.5e-73, 59.36% id in 406 aa, and to Pseudomonas stutzeri copper-binding periplasmic protein precursor NosD SWALL:NOSD_PSEST (SWALL:P19843) (436 aa) fasta scores: E(): 6.3e-24, 38.71% id in 372 aa; copper-binding periplasmic protein 1860502 3091678 BPSL1606 Burkholderia pseudomallei K96243 copper-binding periplasmic protein YP_108222.1 1859252 R 272560 CDS YP_108223.1 53719237 3093662 complement(1860683..1862650) 1 NC_006350.1 reduces nitrous oxide to nitrogen; nitrous-oxide reductase 1862650 nosZ 3093662 nosZ Burkholderia pseudomallei K96243 nitrous-oxide reductase YP_108223.1 1860683 R 272560 CDS YP_108224.1 53719238 3094171 1863332..1864390 1 NC_006350.1 Similar to Ralstonia solanacearum probable thiamine biosynthesis ApbE transmembrane protein rsp1366 or rs02092 SWALL:Q8XQC0 (EMBL:AL646084) (340 aa) fasta scores: E(): 5.6e-20, 33.13% id in 335 aa, and to Salmonella typhimurium thiamine biosynthesis lipoprotein ApbE precursor or stm2266 SWALL:APBE_SALTY (SWALL:P41780) (350 aa) fasta scores: E(): 7.7e-16, 27.21% id in 316 aa; thiamine biosynthesis lipoprotein 1864390 3094171 BPSL1608 Burkholderia pseudomallei K96243 thiamine biosynthesis lipoprotein YP_108224.1 1863332 D 272560 CDS YP_108225.1 53719239 3094172 1864412..1865416 1 NC_006350.1 Similar to Methanosarcina acetivorans multidrug ABC transporter ATP-binding protein ma2689 SWALL:Q8TMH0 (EMBL:AE010965) (323 aa) fasta scores: E(): 7.2e-24, 32% id in 325 aa, and to Rhizobium meliloti ABC transporter ATP-binding protein rb0184 or smb20184 SWALL:Q92WX8 (EMBL:AL603642) (242 aa) fasta scores: E(): 6.6e-23, 41.78% id in 213 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; ABC transporter ATP-binding protein 1865416 3094172 BPSL1609 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_108225.1 1864412 D 272560 CDS YP_108226.1 53719240 3094497 1865413..1866153 1 NC_006350.1 Similar to Methanosarcina acetivorans multidrug ABC transporter permease ma2109 SWALL:Q8TP17 (EMBL:AE010897) (250 aa) fasta scores: E(): 1.5e-22, 34.67% id in 248 aa, and to Pyrococcus furiosus daunorubicin resistance membrane protein pf0582 SWALL:Q8U388 (EMBL:AE010180) (254 aa) fasta scores: E(): 2.8e-18, 32.08% id in 240 aa; ABC transporter membrane protein 1866153 3094497 BPSL1610 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_108226.1 1865413 D 272560 CDS YP_108227.1 53719241 3094498 1866328..1867917 1 NC_006350.1 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 8.7e-45, 38.66% id in 538 aa, and to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc0606 or rs06104 SWALL:Q8Y1T3 (EMBL:AL646060) (617 aa) fasta scores: E(): 1.6e-46, 44.98% id in 429 aa; methyl-accepting chemotaxis transmembrane protein 1867917 3094498 BPSL1611 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis transmembrane protein YP_108227.1 1866328 D 272560 CDS YP_108228.1 53719242 3093237 1868038..1868523 1 NC_006350.1 hypothetical protein 1868523 3093237 BPSL1612 Burkholderia pseudomallei K96243 hypothetical protein YP_108228.1 1868038 D 272560 CDS YP_108229.1 53719243 3093238 1868738..1870450 1 NC_006350.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 1870450 3093238 BPSL1613 Burkholderia pseudomallei K96243 dihydroxyacetone kinase YP_108229.1 1868738 D 272560 CDS YP_108230.1 53719244 3091959 complement(1870831..1871871) 1 NC_006350.1 No significant database matches to the full length CDS. C-terminus is is weakly similar to C-terminal region of Pseudomonas sp. vanillate O-demethylase oxygenase subunit VanA SWALL:VANA_PSES9 (SWALL:P12609) (329 aa) fasta scores: E(): 2.9e-05, 26.1% id in 272 aa; hypothetical protein 1871871 3091959 BPSL1614 Burkholderia pseudomallei K96243 hypothetical protein YP_108230.1 1870831 R 272560 CDS YP_108231.1 53719245 3091960 complement(<1871907..1872869) 1 NC_006350.1 No significant database matches to the full length CDS. N-terminus is weakly similar to the N-terminal region of Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit Pht3 SWALL:PHT3_PSEPU (SWALL:Q05183) (439 aa) fasta scores: E(): 2e-06, 29.46% id in 207 aa; iron-sulfur protein 1872869 3091960 BPSL1615 Burkholderia pseudomallei K96243 iron-sulfur protein YP_108231.1 <1871907 R 272560 CDS YP_108232.1 53719246 3093652 complement(1872876..1874255) 1 NC_006350.1 Similar to Streptomyces viridochromogenes transporter AviJ SWALL:Q93KW8 (EMBL:AF333038) (476 aa) fasta scores: E(): 3.6e-37, 35.1% id in 433 aa, and to Actinosynnema pretiosum Na+/H+ antiporter Asm5 SWALL:AAM54083 (EMBL:AF453501) (416 aa) fasta scores: E(): 5.2e-31, 35.55% id in 405 aa; transport related membrane protein 1874255 3093652 BPSL1616 Burkholderia pseudomallei K96243 transport related membrane protein YP_108232.1 1872876 R 272560 CDS YP_108233.1 53719247 3093653 complement(1874296..1875738) 1 NC_006350.1 Similar to Amycolatopsis orientalis hypothetical hydroxylase A SWALL:P96563 (EMBL:U84350) (491 aa) fasta scores: E(): 1.1e-44, 35.74% id in 414 aa, and to Amycolatopsis mediterranei halogenase BhaA SWALL:O87676 (EMBL:Y16952) (491 aa) fasta scores: E(): 1.5e-43, 34.78% id in 414 aa; hydroxylase 1875738 3093653 BPSL1617 Burkholderia pseudomallei K96243 hydroxylase YP_108233.1 1874296 R 272560 CDS YP_108234.1 53719248 3092088 complement(1875876..1876574) 1 NC_006350.1 hypothetical protein 1876574 3092088 BPSL1618 Burkholderia pseudomallei K96243 hypothetical protein YP_108234.1 1875876 R 272560 CDS YP_108235.1 53719249 3092749 1878828..1879178 1 NC_006350.1 hypothetical protein 1879178 3092749 BPSL1621 Burkholderia pseudomallei K96243 hypothetical protein YP_108235.1 1878828 D 272560 CDS YP_108236.1 53719250 3092750 1879312..1880082 1 NC_006350.1 hypothetical protein 1880082 3092750 BPSL1622 Burkholderia pseudomallei K96243 hypothetical protein YP_108236.1 1879312 D 272560 CDS YP_108237.1 53719251 3092283 complement(1880385..1881473) 1 NC_006350.1 Similar to Rhizobium loti polyhydroxybutyrate depolymerase mlr2444 SWALL:Q98IE0 (EMBL:AP002999) (371 aa) fasta scores: E(): 5.5e-17, 30.51% id in 331 aa, and to Alcaligenes faecalis poly(3-hydroxybutyrate) depolymerase precursor(PHB depolymerase) SWALL:PHB_ALCFA (SWALL:P12625) (488 aa) fasta scores: E(): 7.9e-08, 27.11% id in 295 aa; hypothetical protein 1881473 3092283 BPSL1623 Burkholderia pseudomallei K96243 hypothetical protein YP_108237.1 1880385 R 272560 CDS YP_108238.1 53719252 3092284 complement(1881764..1881955) 1 NC_006350.1 hypothetical protein 1881955 3092284 BPSL1624 Burkholderia pseudomallei K96243 hypothetical protein YP_108238.1 1881764 R 272560 CDS YP_108239.1 53719253 3091575 1882057..1882524 1 NC_006350.1 Similar to Xanthomonas axonopodis hypothetical protein xac1124 SWALL:AAM35997 (EMBL:AE011741) (146 aa) fasta scores: E(): 1.5e-24, 50% id in 146 aa, and to Synechocystis sp. hypothetical protein slr0325 SWALL:Q55530 (EMBL:D63999) (161 aa) fasta scores: E(): 5.2e-22, 45.07% id in 142 aa; hypothetical protein 1882524 3091575 BPSL1625 Burkholderia pseudomallei K96243 hypothetical protein YP_108239.1 1882057 D 272560 CDS YP_108240.1 53719254 3091576 1883679..1884209 1 NC_006350.1 Similar to Salmonella typhimurium type-1 fimbrial protein, A chain precursor FimA or stm0543 SWALL:FM1A_SALTY (SWALL:P37921) (185 aa) fasta scores: E(): 1.8e-12, 32.44% id in 188 aa, and to Klebsiella pneumoniae fimbrial subunit type 1 precursor Fim SWALL:FM12_KLEPN (SWALL:P12903) (182 aa) fasta scores: E(): 3e-12, 35.67% id in 185 aa; fimbrial subunit type 1 1884209 3091576 BPSL1626 Burkholderia pseudomallei K96243 fimbrial subunit type 1 YP_108240.1 1883679 D 272560 CDS YP_108241.1 53719255 3092023 1884308..1885078 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable pili assembly chaperone pa0993 SWALL:Q9I4X6 (EMBL:AE004532) (237 aa) fasta scores: E(): 5.8e-28, 42.14% id in 242 aa, and to Escherichia coli chaperone protein precursor EcpD or b0140 SWALL:ECPD_ECOLI (SWALL:P33128) (246 aa) fasta scores: E(): 1.2e-21, 33.19% id in 232 aa; fimbrial assembly chaperone 1885078 3092023 BPSL1627 Burkholderia pseudomallei K96243 fimbrial assembly chaperone YP_108241.1 1884308 D 272560 CDS YP_108242.1 53719256 3092024 1885085..1887637 1 NC_006350.1 Similar to Salmonella typhimurium fimbrial usher StiC or stm0175 SWALL:Q8ZRR6 (EMBL:AE008702) (848 aa) fasta scores: E(): 1.6e-89, 34.28% id in 872 aa, and to Escherichia coli outer membrane usher protein AfaC precursor SWALL:AFAC_ECOLI (SWALL:P53517) (859 aa) fasta scores: E(): 9.4e-79, 32% id in 881 aa; fimbrial usher protein 1887637 3092024 BPSL1628 Burkholderia pseudomallei K96243 fimbrial usher protein YP_108242.1 1885085 D 272560 CDS YP_108243.1 53719257 3094243 1887634..1888599 1 NC_006350.1 Similar to Escherichia coli type-1 fimbrial protein, A chain precursor FimA or PilA or b4314 SWALL:FM1A_ECOLI (SWALL:P04128) (182 aa) fasta scores: E(): 4.9e-09, 35.32% id in 167 aa, and to Xylella fastidiosa fimbrial adhesin precursor xf0077 SWALL:Q9PH69 (EMBL:AE003862) (356 aa) fasta scores: E(): 3.5e-10, 34.14% id in 246 aa. Note: This CDS has no similarities to any database matches in its N-terminal region; type-1 fimbrial protein subunit A 1888599 3094243 BPSL1629 Burkholderia pseudomallei K96243 type-1 fimbrial protein subunit A YP_108243.1 1887634 D 272560 CDS YP_108244.1 53719258 3094244 1889376..1889627 1 NC_006350.1 hypothetical protein 1889627 3094244 BPSL1630 Burkholderia pseudomallei K96243 hypothetical protein YP_108244.1 1889376 D 272560 CDS YP_108245.1 53719259 3094819 1889771..1893145 1 NC_006350.1 Similar to the N-terminal region of Xanthomonas axonopodis outer membrane protein XadA or xac3546 SWALL:AAM38389 (EMBL:AE012003) (2190 aa) fasta scores: E(): 5.2e-56, 36.63% id in 1111 aa, and to full length of Xanthomonas oryzae pv. oryzae outer membrane protein XadA SWALL:Q9FDA0 (EMBL:AF288222) (1265 aa) fasta scores: E(): 1.8e-37, 29.89% id in 1278 aa. Note: Contains a repeat region between approx. residue 436 and residue 862, containing the repeat: NSTA(N/S)GTN(ST/AS)A(S/T)G(D/E). It is also similar to BPSS0088 (646 aa) fasta scores: E(): 2.9e-64, 56.604% identity in 636 aa overlap over the mentioned repeat region; outer membrane protein 1893145 3094819 BPSL1631 Burkholderia pseudomallei K96243 outer membrane protein YP_108245.1 1889771 D 272560 CDS YP_108246.1 53719260 3094820 1894492..1894977 1 NC_006350.1 hypothetical protein 1894977 3094820 BPSL1632 Burkholderia pseudomallei K96243 hypothetical protein YP_108246.1 1894492 D 272560 CDS YP_108247.1 53719261 3092021 1895264..1895929 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 capsular synthesis regulator component B RcsB or b2217 or z3476 or ecs3106 SWALL:RCSB_ECOLI (SWALL:P14374) (216 aa) fasta scores: E(): 6.4e-17, 32.21% id in 208 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa3714 SWALL:Q9HXS7 (EMBL:AE004790) (213 aa) fasta scores: E(): 1.2e-19, 36.15% id in 213 aa; two-component system, response regulator 1895929 3092021 BPSL1633 Burkholderia pseudomallei K96243 two-component system, response regulator YP_108247.1 1895264 D 272560 CDS YP_108248.1 53719262 3092022 1895929..1899177 1 NC_006350.1 Similar to Escherichia coli sensor protein RcsC or b2218 SWALL:RCSC_ECOLI (SWALL:P14376) (949 aa) fasta scores: E(): 7.1e-44, 27.18% id in 986 aa, and to Ralstonia solanacearum probable capsular synthesis regulatory rsp1622 or rs02179 SWALL:Q8XPL6 (EMBL:AL646086) (1098 aa) fasta scores: E(): 2.9e-52, 28.9% id in 993 aa.Note: This CDS appears to have a histidine kinase domain and a response regulator domain also; two-component regulatory system sensor kinase 1899177 3092022 BPSL1634 Burkholderia pseudomallei K96243 two-component regulatory system sensor kinase YP_108248.1 1895929 D 272560 CDS YP_108249.1 53719263 3091764 1899405..1900298 1 NC_006350.1 Similar to the C-terminal region of Xanthomonas axonopodis GGDEF family protein xac1938 SWALL:AAM36800 (EMBL:AE011829) (695 aa) fasta scores: E(): 1.3e-22, 33.57% id in 280 aa, and of Escherichia coli hypothetical protein YddU or b1489 SWALL:YDDU_ECOLI (SWALL:P76129) (799 aa) fasta scores: E(): 3.1e-21, 31.07% id in 251 aa; hypothetical protein 1900298 3091764 BPSL1635 Burkholderia pseudomallei K96243 hypothetical protein YP_108249.1 1899405 D 272560 CDS YP_108250.1 53719264 3091765 1901631..1901939 1 NC_006350.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 5.8e-08, 37.63% id in 93 aa, and to Rhodobacter capsulatus trans-acting regulatory protein HvrA SWALL:HVRA_RHOCA (SWALL:P42505) (102 aa) fasta scores: E(): 0.025, 30.12% id in 83 aa; regulatory protein 1901939 3091765 BPSL1636 Burkholderia pseudomallei K96243 regulatory protein YP_108250.1 1901631 D 272560 CDS YP_108251.1 53719265 3091643 complement(1902196..1903266) 1 NC_006350.1 Only very low similarity to the central region of Arabidopsis thaliana lipase, t4k22.3 SWALL:Q9C8G6 (EMBL:AC025295) (529 aa) fasta scores: E(): 0.37, 31.77% id in 107 aa; lipase 1903266 3091643 BPSL1637 Burkholderia pseudomallei K96243 lipase YP_108251.1 1902196 R 272560 CDS YP_108252.1 53719266 3091884 1904965..1905735 1 NC_006350.1 Similar to Agrobacterium tumefaciens transcriptional regulator, GntR family atu4232 or agr_l_1259 SWALL:Q8U867 (EMBL:AE009352) (245 aa) fasta scores: E(): 6.6e-30, 45.7% id in 221 aa, and to Rhizobium loti transcriptional regulator mll6786 SWALL:Q988D5 (EMBL:AP003010) (223 aa) fasta scores: E(): 2.3e-19, 37.15% id in 218 aa; GntR family transcriptional regulator 1905735 3091884 BPSL1642 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_108252.1 1904965 D 272560 CDS YP_108253.1 53719267 3091885 1906033..1906620 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein ra0427 or sma0791 SWALL:Q92ZM8 (EMBL:AE007233) (200 aa) fasta scores: E(): 7.8e-54, 71.05% id in 190 aa, and to Agrobacterium tumefaciens hypothetical protein atu4237 or agr_l_1248 SWALL:Q8U862 (EMBL:AE009353) (200 aa) fasta scores: E(): 1.2e-53, 69.74% id in 195 aa; hypothetical protein 1906620 3091885 BPSL1643 Burkholderia pseudomallei K96243 hypothetical protein YP_108253.1 1906033 D 272560 CDS YP_108254.1 53719268 3092620 1906610..1907494 1 NC_006350.1 Similar to Agrobacterium tumefaciens hydrolase atu4238 or agr_l_1247 SWALL:Q8U861 (EMBL:AE009353) (286 aa) fasta scores: E(): 7.7e-32, 42.22% id in 270 aa, and to Bacillus subtilis esterase YtxM SWALL:YTXM_BACSU (SWALL:P23974) (274 aa) fasta scores: E(): 2.4e-12, 25.84% id in 267 aa; hydrolase 1907494 3092620 BPSL1644 Burkholderia pseudomallei K96243 hydrolase YP_108254.1 1906610 D 272560 CDS YP_108255.1 53719269 3092621 1907487..1908443 1 NC_006350.1 Similar to Agrobacterium tumefaciens nitrilotriacetate monooxygenase component B atu5229 or agr_pat_322 SWALL:Q8UK94 (EMBL:AE008945) (323 aa) fasta scores: E(): 2.9e-40, 41.66% id in 312 aa, and N-terminal region to Chelatobacter heintzii nitrilotriacetate monooxygenase component B NtaB or NmoB SWALL:NTAB_CHEHE (SWALL:P54990) (322 aa) fasta scores: E(): 1.3e-25, 50.58% id in 172 aa; oxygenase 1908443 3092621 BPSL1645 Burkholderia pseudomallei K96243 oxygenase YP_108255.1 1907487 D 272560 CDS YP_108256.1 53719270 3091978 1908552..1909595 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein ra0430 or sma0794 SWALL:Q92ZM5 (EMBL:AE007233) (346 aa) fasta scores: E(): 1.2e-85, 58.67% id in 346 aa, and to Agrobacterium tumefaciens alkanal monooxygenase alpha chain atu4240 or agr_l_1243 SWALL:Q8U859 (EMBL:AE009353) (346 aa) fasta scores: E(): 6.8e-84, 58.38% id in 346 aa; monooxygenase 1909595 3091978 BPSL1646 Burkholderia pseudomallei K96243 monooxygenase YP_108256.1 1908552 D 272560 CDS YP_108257.1 53719271 3091979 1909639..1911111 1 NC_006350.1 Similar to Bacillus subtilis betaine aldehyde dehydrogenase GbsA SWALL:DHAB_BACSU (SWALL:P71016) (490 aa) fasta scores: E(): 3.8e-66, 40.74% id in 481 aa, and to Agrobacterium tumefaciens aldehyde dehydrogenase DhaS or atu4241 or agr_l_1241 SWALL:Q8U858 (EMBL:AE009353) (493 aa) fasta scores: E(): 2.8e-137, 70.87% id in 491 aa; betaine aldehyde dehydrogenase 1911111 3091979 BPSL1647 Burkholderia pseudomallei K96243 betaine aldehyde dehydrogenase YP_108257.1 1909639 D 272560 CDS YP_108258.1 53719272 3093155 1911181..1911495 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein ra0432 or sma0797 SWALL:Q92ZM3 (EMBL:AE007233) (108 aa) fasta scores: E(): 1.7e-27, 69.6% id in 102 aa, and to Agrobacterium tumefaciens hypothetical protein atu4242 or agr_l_1239 SWALL:Q8U857 (EMBL:AE009353) (104 aa) fasta scores: E(): 2.9e-26, 67.96% id in 103 aa; hypothetical protein 1911495 3093155 BPSL1648 Burkholderia pseudomallei K96243 hypothetical protein YP_108258.1 1911181 D 272560 CDS YP_108259.1 53719273 3093156 1911565..1912596 1 NC_006350.1 Similar to Escherichia coli spermidine/putrescine-binding periplasmic protein precursor PotD or b1123 SWALL:POTD_ECOLI (SWALL:P23861) (348 aa) fasta scores: E(): 5.8e-12, 26.25% id in 320 aa, to Agrobacterium tumefaciens ABC transporter substrate binding protein atu4243 or agr_l_1237 SWALL:Q8U856 (EMBL:AE009353) (336 aa) fasta scores: E(): 6.2e-86, 63.09% id in 336 aa, and to Rhizobium meliloti ABC transporter periplasmic solute-binding protein ra0433 or sma0799 SWALL:Q92ZM2 (EMBL:AE007234) (319 aa) fasta scores: E(): 2.4e-82, 64.57% id in 319 aa; ABC transporter substrate-binding protein 1912596 3093156 BPSL1649 Burkholderia pseudomallei K96243 ABC transporter substrate-binding protein YP_108259.1 1911565 D 272560 CDS YP_108260.1 53719274 3093723 1912675..1913559 1 NC_006350.1 Similar to Escherichia coli spermidine/putrescine transport system permease PotB or b1125 SWALL:POTB_ECOLI (SWALL:P23860) (275 aa) fasta scores: E(): 8.4e-25, 35.57% id in 253 aa, and to Rhizobium meliloti ABC transporter permease ra0434 or sma0800 SWALL:Q92ZM1 (EMBL:AE007234) (291 aa) fasta scores: E(): 1.5e-66, 66.07% id in 280 aa; ABC transporter permease 1913559 3093723 BPSL1650 Burkholderia pseudomallei K96243 ABC transporter permease YP_108260.1 1912675 D 272560 CDS YP_108261.1 53719275 3093724 1913561..1914355 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 spermidine/putrescine transport system permease PotC or b1124 or z1763 or ecs1500 SWALL:POTC_ECOLI (SWALL:P23859) (264 aa) fasta scores: E(): 5.5e-19, 29.13% id in 254 aa, and to Rhizobium meliloti ABC transporter permease ra0435 or sma0802 SWALL:Q92ZM0 (EMBL:AE007234) (266 aa) fasta scores: E(): 1.5e-64, 66.41% id in 262 aa; ABC transporter permease 1914355 3093724 BPSL1651 Burkholderia pseudomallei K96243 ABC transporter permease YP_108261.1 1913561 D 272560 CDS YP_108262.1 53719276 3091679 1914372..1915463 1 NC_006350.1 Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 7.7e-42, 41.14% id in 350 aa, and to Rhizobium meliloti ABC-transporter ATP-binding protein ra0436 or sma0803 SWALL:Q92ZL9 (EMBL:AE007234) (359 aa) fasta scores: E(): 1.6e-71, 60.27% id in 360 aa; ABC transporter ATP-binding protein 1915463 3091679 BPSL1652 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_108262.1 1914372 D 272560 CDS YP_108263.1 53719277 3091680 1915444..1916208 1 NC_006350.1 Similar to Agrobacterium tumefaciens transcriptional regulator, GntR family atu4232 or agr_l_1259 SWALL:Q8U867 (EMBL:AE009352) (245 aa) fasta scores: E(): 1.1e-32, 47.59% id in 229 aa, and to Yersinia pestis GntR-family transcriptional regulatory protein ypo3651 SWALL:Q8ZAY1 (EMBL:AJ414158) (220 aa) fasta scores: E(): 3.7e-20, 37.08% id in 213 aa; GntR family transcriptional regulator 1916208 3091680 BPSL1653 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_108263.1 1915444 D 272560 CDS YP_108264.1 53719278 3094464 1916230..1917690 1 NC_006350.1 NADP+; Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 2e-126, 66.45% id in 480 aa, and to Pseudomonas aeruginosa succinate-semialdehyde dehydrogenase pa0265 SWALL:Q9I6M5 (EMBL:AE004464) (483 aa) fasta scores: E(): 1e-130, 69.03% id in 478 aa; succinate-semialdehyde dehydrogenase 1917690 gabD 3094464 gabD Burkholderia pseudomallei K96243 succinate-semialdehyde dehydrogenase YP_108264.1 1916230 D 272560 CDS YP_108265.1 53719279 3093497 1917834..1918952 1 NC_006350.1 Similar to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 6.4e-45, 42.89% id in 387 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.4e-17, 31.11% id in 376 aa. Note: Also similar to BPSL3036 (387 aa) fasta scores: E(): 1.4e-51, 45.503% identity in 378 aa overlap; outer membrane porin 1918952 3093497 BPSL1655 Burkholderia pseudomallei K96243 outer membrane porin YP_108265.1 1917834 D 272560 CDS YP_108266.1 53719280 3093498 1919077..1919367 1 NC_006350.1 hypothetical protein 1919367 3093498 BPSL1656 Burkholderia pseudomallei K96243 hypothetical protein YP_108266.1 1919077 D 272560 CDS YP_108267.1 53719281 3094585 complement(1919543..1920376) 1 NC_006350.1 Similar to the C-terminal region of Xanthomonas campestris insertion element IS476 hypothetical protein SWALL:YI61_XANCV (SWALL:P25438) (346 aa) fasta scores: E(): 1.3e-63, 61.5% id in 265 aa, and to the full length Ralstonia solanacearum ISRso14-transposase OrfB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 5.9e-98, 86.86% id in 274 aa; hypothetical protein 1920376 3094585 BPSL1657 Burkholderia pseudomallei K96243 hypothetical protein YP_108267.1 1919543 R 272560 CDS YP_108268.1 53719282 3094586 complement(1920400..1920663) 1 NC_006350.1 Identical to Burkholderia cepacia insertion element IS407 hypothetical protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 3.7e-32, 100% id in 87 aa, and higly similar to to Ralstonia solanacearum ISRso14-transposase orfA protein SWALL:Q8XGL4 (EMBL:AL646083) (87 aa) fasta scores: E(): 2.1e-29, 93.1% id in 87 aa; hypothetical protein 1920663 3094586 BPSL1658 Burkholderia pseudomallei K96243 hypothetical protein YP_108268.1 1920400 R 272560 CDS YP_108269.1 53719283 3094499 1921337..1921723 1 NC_006350.1 Similar to Alcaligenes eutrophus HNS-like protein phg180 SWALL:Q7WXF4 (EMBL:AY305378) (103 aa) fasta scores: E(): 1.6e-07, 35% id in 100 aa, and to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 2.5e-10, 41.05% id in 95 aa. Possible alternative translational start site; DNA-biding protein, H-NS-like 1921723 3094499 BPSL1658a Burkholderia pseudomallei K96243 DNA-biding protein, H-NS-like YP_108269.1 1921337 D 272560 CDS YP_108270.1 53719284 3094500 1922210..1923109 1 NC_006350.1 C-terminal region similar to C-terminal region of Escherichia coli, and Escherichia coli O157:H7 outer membrane protein A precursor OmpA or TolG or Tut or Con or b0957 or z1307 or ecs1041 SWALL:OMPA_ECOLI (SWALL:P02934) (346 aa) fasta scores: E(): 2.1e-12, 38.36% id in 159 aa. N-terminal region has low similarities to exported proteins/lipoproteins; hypothetical protein 1923109 3094500 BPSL1659 Burkholderia pseudomallei K96243 hypothetical protein YP_108270.1 1922210 D 272560 CDS YP_108271.1 53719285 3094713 1923238..1925037 1 NC_006350.1 Similar to Xanthomonas maltophilia SmeC SWALL:Q9RBY7 (EMBL:AF173226) (471 aa) fasta scores: E(): 2.3e-06, 23.89% id in 477 aa, and to Caulobacter crescentus outer membrane protein RsaF SWALL:Q9RQV0 (EMBL:AF062345) (527 aa) fasta scores: E(): 1.4e-05, 23.3% id in 532 aa; outer membrane protein 1925037 3094713 BPSL1660 Burkholderia pseudomallei K96243 outer membrane protein YP_108271.1 1923238 D 272560 CDS YP_108272.1 53719286 3094714 1925148..1934837 1 NC_006350.1 Similar to the C-terminal region of Ralstonia solanacearum hemagglutinin/hemolysin-related protein rsp1180 or rs05070 SWALL:Q8XQP2 (EMBL:AL646083) (4106 aa) fasta scores: E(): 6.4e-92, 30.67% id in 3218 aa, and also to the C-terminal region of Escherichia coli O157:H7 RTX family exoprotein z0615 SWALL:Q8X4H5 (EMBL:AE005229) (5188 aa) fasta scores: E(): 4e-38, 26.08% id in 3209 aa. Note: Contains a repeat region between residue 538 and residue 1362; hemolysin-like protein 1934837 3094714 BPSL1661 Burkholderia pseudomallei K96243 hemolysin-like protein YP_108272.1 1925148 D 272560 CDS YP_108273.1 53719287 3094336 1934933..1935442 1 NC_006350.1 hypothetical protein 1935442 3094336 BPSL1662 Burkholderia pseudomallei K96243 hypothetical protein YP_108273.1 1934933 D 272560 CDS YP_108274.1 53719288 3094337 1935439..1936314 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0167 rsp0167 or rs04679 SWALL:Q8XTE6 (EMBL:AL646076) (304 aa) fasta scores: E(): 7.2e-38, 42.43% id in 271 aa; hypothetical protein 1936314 3094337 BPSL1663 Burkholderia pseudomallei K96243 hypothetical protein YP_108274.1 1935439 D 272560 CDS YP_108275.1 53719289 3091563 1936340..1938640 1 NC_006350.1 Similar to the C-terminal region of Vibrio cholerae toxin secretion ATP-binding protein vca1084 SWALL:Q9KKL9 (EMBL:AE004433) (704 aa) fasta scores: E(): 1.4e-62, 34.99% id in 563 aa, and of Pasteurella haemolytica-like sp. leukotoxin secretion ATP-binding protein LktB SWALL:HLYB_PASSP (SWALL:P55122) (708 aa) fasta scores: E(): 5.3e-37, 27.82% id in 575 aa, and to the full length of Ralstonia solanacearum composite ATP-binding transmembrane ABC transporter protein rsp1182 or rs05072 SWALL:Q8XQP0 (EMBL:AL646083) (739 aa) fasta scores: E(): 1.6e-45, 28.65% id in 719 aa; toxin transport-related membrane protein 1938640 3091563 BPSL1664 Burkholderia pseudomallei K96243 toxin transport-related membrane protein YP_108275.1 1936340 D 272560 CDS YP_108276.1 53719290 3091564 1938631..1940046 1 NC_006350.1 Similar to Rhizobium meliloti toxin secretion transmembrane protein r02036 or smc04208 SWALL:Q92NX2 (EMBL:AL591789) (436 aa) fasta scores: E(): 1.6e-27, 33.25% id in 439 aa, and to Vibrio cholerae secretion protein, HlyD family vca1080 SWALL:Q9KKM3 (EMBL:AE004433) (481 aa) fasta scores: E(): 6.4e-27, 34.25% id in 435 aa; toxin-related secretion protein 1940046 3091564 BPSL1665 Burkholderia pseudomallei K96243 toxin-related secretion protein YP_108276.1 1938631 D 272560 CDS YP_108277.1 53719291 3093605 1940157..1944521 1 NC_006350.1 Very low similarities to any database matches to the full length of the CDS. The matches are reduced to the TPR domains that this CDS contains, e.g. Methanosarcina acetivorans TPR-domain containing protein ma1613 SWALL:Q8TQD1 (EMBL:AE010832) (1885 aa) fasta scores: E(): 1.6e-07, 21.22% id in 1164 aa; hypothetical protein 1944521 3093605 BPSL1666 Burkholderia pseudomallei K96243 hypothetical protein YP_108277.1 1940157 D 272560 CDS YP_108278.1 53719292 3093606 1944518..1946188 1 NC_006350.1 Similar in the C-terminal region to Ralstonia solanacearum hypothetical protein rsc3164 or rs00434 SWALL:Q8XUM3 (EMBL:AL646074) (387 aa) fasta scores: E(): 1.1e-31, 36.16% id in 365 aa; hypothetical protein 1946188 3093606 BPSL1667 Burkholderia pseudomallei K96243 hypothetical protein YP_108278.1 1944518 D 272560 CDS YP_108279.1 53719293 3093619 1946220..1947071 1 NC_006350.1 Similar in its C-terminal region to Bacillus subtilis probable adenylylsulfate kinase CysC SWALL:CYC1_BACSU (SWALL:O34577) (197 aa) fasta scores: E(): 6.5e-37, 51.81% id in 193 aa, and similar to the C-terminal region (where the adenylylsulfate kinase activity has been mapped) Arabidopsis thaliana adenylylsulfate kinase 1, chloroplast precursor Akn1 or at2g14750 or f26c24.11 or t6b13.1 SWALL:KAP1_ARATH (SWALL:Q43295) (276 aa) fasta scores: E(): 3.1e-33, 43.61% id in 227 aa; adenylylsulfate kinase 1947071 3093619 BPSL1668 Burkholderia pseudomallei K96243 adenylylsulfate kinase YP_108279.1 1946220 D 272560 CDS YP_108280.1 53719294 3091933 1948084..1948797 1 NC_006350.1 Similar to Ralstonia solanacearum probable two-component system response regulator transcription regulator protein rsc1073 or rs04004 SWALL:Q8Y0H1 (EMBL:AL646062) (237 aa) fasta scores: E(): 3.5e-28, 40.69% id in 231 aa, and to Mycobacterium bovis sensory transduction protein Regx3 SWALL:RGX3_MYCBO (SWALL:O07130) (227 aa) fasta scores: E(): 1.4e-21, 34.51% id in 226 aa; two component system response regulator 1948797 3091933 BPSL1669 Burkholderia pseudomallei K96243 two component system response regulator YP_108280.1 1948084 D 272560 CDS YP_108281.1 53719295 3091934 complement(1949196..1949891) 1 NC_006350.1 Similar to the N-terminal region of Streptomyces coelicolor transposase sco0083 or scj11.12 SWALL:Q9RI92 (EMBL:AL109949) (282 aa) fasta scores: E(): 4.8e-27, 44.63% id in 233 aa, and to the central part of Burkholderia cepacia insertion element IS402 hypothetical 16.2 kDa protein SWALL:YI22_BURCE (SWALL:P24537) (147 aa) fasta scores: E(): 3.6e-26, 64.17% id in 134 aa; transposase 1949891 3091934 BPSL1670 Burkholderia pseudomallei K96243 transposase YP_108281.1 1949196 R 272560 CDS YP_108282.1 53719296 3092596 1950345..1950824 1 NC_006350.1 hypothetical protein 1950824 3092596 BPSL1671 Burkholderia pseudomallei K96243 hypothetical protein YP_108282.1 1950345 D 272560 CDS YP_108283.1 53719297 3092597 1951025..1952071 1 NC_006350.1 hypothetical protein 1952071 3092597 BPSL1672 Burkholderia pseudomallei K96243 hypothetical protein YP_108283.1 1951025 D 272560 CDS YP_108284.1 53719298 3092921 complement(1953075..1954175) 1 NC_006350.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 9.4e-12, 30.14% id in 408 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 3.2e-44, 40.66% id in 391 aa; outer membrane porin 1954175 3092921 BPSL1674 Burkholderia pseudomallei K96243 outer membrane porin YP_108284.1 1953075 R 272560 CDS YP_108285.1 53719299 3094329 complement(1954466..1954945) 1 NC_006350.1 Similar to the C-terminal region of Ralstonia solanacearum transposase Tnp SWALL:Q9RBZ6 (EMBL:AF167984) (321 aa) fasta scores: E(): 1.4e-06, 44.04% id in 84 aa, and of Burkholderia cepacia transposase SWALL:Q93L07 (EMBL:AF029344) (327 aa) fasta scores: E(): 2.1e-05, 43.21% id in 81 aa; transposase 1954945 3094329 BPSL1675 Burkholderia pseudomallei K96243 transposase YP_108285.1 1954466 R 272560 CDS YP_108286.1 53719300 3094330 complement(1955029..1956663) 1 NC_006350.1 Similar to Rhizobium meliloti histidine ammonia-lyase ra0165 or sma0306 SWALL:Q930N0 (EMBL:AE007210) (546 aa) fasta scores: E(): 1.8e-108, 55.01% id in 538 aa, and to Rhizobium loti histidine ammonia-lyase mll7124 SWALL:Q987B4 (EMBL:AP003011) (498 aa) fasta scores: E(): 2.8e-21, 32.15% id in 510 aa. Note: Similar also to many eukaryotic proteins; exported histidine ammonia-lyase 1956663 3094330 BPSL1676 Burkholderia pseudomallei K96243 exported histidine ammonia-lyase YP_108286.1 1955029 R 272560 CDS YP_108287.1 53719301 3093756 complement(1956681..1957964) 1 NC_006350.1 Similar to Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 1.9e-51, 36.72% id in 422 aa, and to Ralstonia solanacearum probable sugar-proton symporter transmembrane protein rsp0536 or rs00416 SWALL:Q8XSE0 (EMBL:AL646079) (441 aa) fasta scores: E(): 1.6e-63, 44.55% id in 404 aa; transport-related, integral membrane protein 1957964 3093756 BPSL1677 Burkholderia pseudomallei K96243 transport-related, integral membrane protein YP_108287.1 1956681 R 272560 CDS YP_108288.1 53719302 3093757 complement(1958040..1959680) 1 NC_006350.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1959680 3093757 BPSL1678 Burkholderia pseudomallei K96243 urocanate hydratase YP_108288.1 1958040 R 272560 CDS YP_108289.1 53719303 3093592 complement(1959699..1960790) 1 NC_006350.1 Similar to Agrobacterium tumefaciens hypothetical protein atu3042 or agr_l_3523 SWALL:Q8UBH4 (EMBL:AE009235) (358 aa) fasta scores: E(): 6.2e-11, 25.13% id in 366 aa, and to Rhizobium loti hypothetical protein mll9130 SWALL:Q982D2 (EMBL:AP003015) (361 aa) fasta scores: E(): 4.6e-10, 26.03% id in 338 aa; hypothetical protein 1960790 3093592 BPSL1679 Burkholderia pseudomallei K96243 hypothetical protein YP_108289.1 1959699 R 272560 CDS YP_108290.1 53719304 3093593 complement(1960971..1961861) 1 NC_006350.1 Similar to Escherichia coli transcriptional activator protein LysR or b2839 SWALL:LYSR_ECOLI (SWALL:P03030) (311 aa) fasta scores: E(): 1.7e-28, 35.95% id in 292 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5085 SWALL:Q9HU98 (EMBL:AE004921) (318 aa) fasta scores: E(): 6.5e-30, 38.72% id in 297 aa; LysR family transcriptional regulator 1961861 3093593 BPSL1680 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108290.1 1960971 R 272560 CDS YP_108291.1 53719305 3094798 1961961..1963346 1 NC_006350.1 Similar to Bacillus subtilis allantoinase PucH SWALL:ALN_BACSU (SWALL:O32137) (446 aa) fasta scores: E(): 6.1e-31, 29.27% id in 444 aa, and to Streptomyces coelicolor probable allantoinase sco6247 or scah10.12 or stah10.12 SWALL:ALN_STRCO (SWALL:Q9RKU5) (445 aa) fasta scores: E(): 9.5e-31, 31.62% id in 449 aa; allantoinase 1963346 3094798 BPSL1681 Burkholderia pseudomallei K96243 allantoinase YP_108291.1 1961961 D 272560 CDS YP_108292.1 53719306 3094799 1963343..1964623 1 NC_006350.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1964623 3094799 BPSL1682 Burkholderia pseudomallei K96243 allantoate amidohydrolase YP_108292.1 1963343 D 272560 CDS YP_108293.1 53719307 3091664 1966393..1966929 1 NC_006350.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1966929 3091664 BPSL1686 Burkholderia pseudomallei K96243 RNA polymerase sigma factor YP_108293.1 1966393 D 272560 CDS YP_108294.1 53719308 3094119 1966926..1967567 1 NC_006350.1 Similar to Agrobacterium tumefaciens hypothetical protein atu2267 or agr_c_4120 SWALL:Q8UD60 (EMBL:AE009176) (214 aa) fasta scores: E(): 1.2e-18, 37.55% id in 213 aa, and to Caulobacter crescentus hypothetical protein cc3252 SWALL:Q9A3F2 (EMBL:AE005989) (214 aa) fasta scores: E(): 5e-18, 33.17% id in 214 aa; hypothetical protein 1967567 3094119 BPSL1687 Burkholderia pseudomallei K96243 hypothetical protein YP_108294.1 1966926 D 272560 CDS YP_108295.1 53719309 3094120 complement(1967586..1968296) 1 NC_006350.1 Similar to Agrobacterium tumefaciens hypothetical protein atu2267 or agr_c_4120 SWALL:Q8UD60 (EMBL:AE009176) (214 aa) fasta scores: E(): 3.7e-15, 33.8% id in 213 aa, and to Brucella melitensis extracytoplasmic function alternative sigma factor bmeii0072 SWALL:Q8YDV2 (EMBL:AE009645) (413 aa) fasta scores: E(): 4.7e-14, 36.03% id in 247 aa; hypothetical protein 1968296 3094120 BPSL1688 Burkholderia pseudomallei K96243 hypothetical protein YP_108295.1 1967586 R 272560 CDS YP_108296.1 53719310 3094125 complement(1968293..1968796) 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein rb0506 or smb20527 SWALL:Q92W39 (EMBL:AL603643) (144 aa) fasta scores: E(): 8.5e-37, 69.63% id in 135 aa, and to Ralstonia solanacearum probable transmembrane protein rsp1037 or rs02374 SWALL:Q8XR31 (EMBL:AL646082) (162 aa) fasta scores: E(): 5.4e-06, 31.64% id in 158 aa; hypothetical protein 1968796 3094125 BPSL1689 Burkholderia pseudomallei K96243 hypothetical protein YP_108296.1 1968293 R 272560 CDS YP_108297.1 53719311 3094126 complement(1968802..1969581) 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein rb0507 or smb20528 SWALL:Q92W38 (EMBL:AL603643) (266 aa) fasta scores: E(): 1.2e-48, 54% id in 250 aa, and to Caulobacter crescentus hypothetical protein cc3256 SWALL:Q9A3E8 (EMBL:AE005989) (254 aa) fasta scores: E(): 4.5e-14, 30.69% id in 215 aa; hypothetical protein 1969581 3094126 BPSL1690 Burkholderia pseudomallei K96243 hypothetical protein YP_108297.1 1968802 R 272560 CDS YP_108298.1 53719312 3091628 complement(1969571..1970482) 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein rb0508 or smb20529 SWALL:Q92W37 (EMBL:AL603643) (309 aa) fasta scores: E(): 2.8e-72, 65.2% id in 273 aa, and to Caulobacter crescentus hypothetical protein cc3255 SWALL:Q9A3E9 (EMBL:AE005989) (280 aa) fasta scores: E(): 1.5e-46, 46.64% id in 268 aa; hypothetical protein 1970482 3091628 BPSL1691 Burkholderia pseudomallei K96243 hypothetical protein YP_108298.1 1969571 R 272560 CDS YP_108299.1 53719313 3091629 complement(1970516..1970827) 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein rb0509 or smb20530 SWALL:Q92W36 (EMBL:AL603643) (112 aa) fasta scores: E(): 1.2e-23, 66.33% id in 101 aa, and to Caulobacter crescentus hypothetical protein cc3254 SWALL:Q9A3F0 (EMBL:AE005989) (150 aa) fasta scores: E(): 2.4e-12, 52.94% id in 85 aa; hypothetical protein 1970827 3091629 BPSL1692 Burkholderia pseudomallei K96243 hypothetical protein YP_108299.1 1970516 R 272560 CDS YP_108300.1 53719314 3091681 complement(1972586..1973254) 1 NC_006350.1 Similar to Agrobacterium tumefaciens transcriptional regulator, GntR family atu3908 or agr_l_1876 SWALL:Q8U922 (EMBL:AE009321) (249 aa) fasta scores: E(): 1.6e-41, 51.62% id in 215 aa, and to Streptomyces coelicolor GntR-family transcriptional regulator sco1410 or sc6d7.29 SWALL:Q9RKW9 (EMBL:AL133213) (231 aa) fasta scores: E(): 2.1e-29, 47.29% id in 203 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; GntR family transcriptional regulator 1973254 3091681 BPSL1695 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_108300.1 1972586 R 272560 CDS YP_108301.1 53719315 3091682 1975293..1975937 1 NC_006350.1 Similar to Xylella fastidiosa recombinase xfa0019 SWALL:Q9PHI6 (EMBL:AE003851) (188 aa) fasta scores: E(): 5.3e-29, 49.73% id in 189 aa, and to Bacteriophage Mu DNA-invertase Gin or 51 SWALL:DNIV_BPMU (SWALL:P03015) (193 aa) fasta scores: E(): 6.8e-28, 48.96% id in 194 aa; recombinase 1975937 3091682 BPSL1696 Burkholderia pseudomallei K96243 recombinase YP_108301.1 1975293 D 272560 CDS YP_108302.1 53719316 3094223 complement(1977067..1977360) 1 NC_006350.1 hypothetical protein 1977360 3094223 BPSL1699 Burkholderia pseudomallei K96243 hypothetical protein YP_108302.1 1977067 R 272560 CDS YP_108303.1 53719317 3092124 complement(1978747..1979340) 1 NC_006350.1 Similar to Shigella boydii PinB gene product SWALL:Q57343 (EMBL:D00660) (195 aa) fasta scores: E(): 2.3e-29, 50.81% id in 185 aa, and to Salmonella typhi DNA-invertase sty3695 SWALL:Q8Z339 (EMBL:AL627279) (188 aa) fasta scores: E(): 2.5e-29, 52.24% id in 178 aa; invertase 1979340 3092124 BPSL1702 Burkholderia pseudomallei K96243 invertase YP_108303.1 1978747 R 272560 CDS YP_108304.1 53719318 3094836 complement(1980105..1980470) 1 NC_006350.1 Similar to Escherichia coli transposase InsC for insertion element IS2 SWALL:INSC_ECOLI (SWALL:P19776) (121 aa) fasta scores: E(): 5.7e-20, 54.31% id in 116 aa, and to Ralstonia solanacearum ISRso10-transposase OrfA protein rsp0461 or rsc1434 or rs00949 or rs05904 SWALL:Q8XGI6 (EMBL:AL646078) (122 aa) fasta scores: E(): 2.5e-29, 69.67% id in 122 aa; transposase 1980470 3094836 BPSL1704 Burkholderia pseudomallei K96243 transposase YP_108304.1 1980105 R 272560 CDS YP_108305.1 53719319 3094837 1981770..1982252 1 NC_006350.1 hypothetical protein 1982252 3094837 BPSL1704a Burkholderia pseudomallei K96243 hypothetical protein YP_108305.1 1981770 D 272560 CDS YP_108306.1 53719320 3094881 1982643..1987463 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein mll2848 SWALL:Q98HJ2 (EMBL:AP003000) (1953 aa) fasta scores: E(): 1.8e-60, 33.27% id in 1677 aa, and to Staphylococcus aureus hypothetical protein sav2654 or sa2447 SWALL:Q99QY4 (EMBL:AP003366) (2271 aa) fasta scores: E(): 3.4e-49, 29.2% id in 1589 aa. Note: High content in alanine, glycine, serine and threonine amino acid residues. Contains also three regions with repeats. Possible alternative translational start sites; hypothetical protein 1987463 3094881 BPSL1705 Burkholderia pseudomallei K96243 hypothetical protein YP_108306.1 1982643 D 272560 CDS YP_108307.1 53719321 3094882 1989162..1989479 1 NC_006350.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 6.8e-07, 32.25% id in 93 aa, and to Escherichia coli ORF1 SWALL:O52122 (EMBL:AF022236) (129 aa) fasta scores: E(): 7.7e-05, 30.7% id in 114 aa; HNS-like protein 1989479 3094882 BPSL1706 Burkholderia pseudomallei K96243 HNS-like protein YP_108307.1 1989162 D 272560 CDS YP_108308.1 53719322 3094450 1989929..1992244 1 NC_006350.1 Similar to Dactylium dendroides galactose oxidase precursor GaoA SWALL:GAOA_DACDE (SWALL:Q01745) (680 aa) fasta scores: E(): 2.4e-20, 29.25% id in 523 aa, and to Stigmatella aurantiaca copper-dependent oxidase Ox SWALL:Q938A2 (EMBL:AY055804) (779 aa) fasta scores: E(): 4.2e-08, 28.26% id in 750 aa; exported oxidase 1992244 3094450 BPSL1707 Burkholderia pseudomallei K96243 exported oxidase YP_108308.1 1989929 D 272560 CDS YP_108309.1 53719323 3094451 1992311..1992739 1 NC_006350.1 hypothetical protein 1992739 3094451 BPSL1708 Burkholderia pseudomallei K96243 hypothetical protein YP_108309.1 1992311 D 272560 CDS YP_108310.1 53719324 3091709 complement(1994317..1996689) 1 NC_006350.1 Similar to Escherichia coli penicillin G acylase precursor Pac SWALL:PAC_ECOLI (SWALL:P06875) (846 aa) fasta scores: E(): 3.6e-08, 25.62% id in 636 aa, and to Pseudomonas sp. penicillin acylase II precursor AcyII SWALL:PAC2_PSES3 (SWALL:P15558) (773 aa) fasta scores: E(): 6.1e-35, 28.93% id in 788 aa; penicillin amidase 1996689 3091709 BPSL1710 Burkholderia pseudomallei K96243 penicillin amidase YP_108310.1 1994317 R 272560 CDS YP_108311.1 53719325 3091710 complement(1996808..1998529) 1 NC_006350.1 Similar to Rhizobium sp. nodulation protein NolNO NolO or Y4hd SWALL:NOLO_RHISN (SWALL:P55474) (680 aa) fasta scores: E(): 6.7e-58, 39.07% id in 581 aa, and to Ralstonia solanacearum transferase rsp0788 or rs01919 SWALL:Q8XRP3 (EMBL:AL646080) (581 aa) fasta scores: E(): 1.2e-41, 30.76% id in 598 aa; carbamoyl transferase 1998529 3091710 BPSL1711 Burkholderia pseudomallei K96243 carbamoyl transferase YP_108311.1 1996808 R 272560 CDS YP_108312.1 53719326 3093426 complement(1998620..2017444) 1 NC_006350.1 Similar to Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 1.5e-105, 31.93% id in 6198 aa, and to all the domains of Bacillus brevis tyrocidine synthetase III TycC SWALL:TYCC_BACBR (SWALL:O30409) blast scores: E(): 0.0, score: 4799 27% id. Note: Taking into consideration the blastp similarities and all the similarities to the domains in Bacillus brevis TycC, it could be proposed that BSPL1712 possibly incorporates six amino acids (Asn, Gln, Tyr, Val, Orn and Leu) into the peptide chain (as counts on five condensation domains) although it lacks the thioesterase domain at the C-terminal region; non-ribosomal antibiotic-related peptide synthase 2017444 3093426 BPSL1712 Burkholderia pseudomallei K96243 non-ribosomal antibiotic-related peptide synthase YP_108312.1 1998620 R 272560 CDS YP_108313.1 53719327 3093427 complement(2017441..2018013) 1 NC_006350.1 Similar to Anabaena sp. hypothetical protein alr7095 SWALL:Q8YL40 (EMBL:AP003600) (186 aa) fasta scores: E(): 3.3e-21, 38.2% id in 178 aa, and to Agrobacterium tumefaciens acetyltransferase atu4764 or agr_l_237 SWALL:Q8U6P3 (EMBL:AE009405) (186 aa) fasta scores: E(): 1.3e-19, 39.54% id in 177 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; acetyltransferase 2018013 3093427 BPSL1713 Burkholderia pseudomallei K96243 acetyltransferase YP_108313.1 2017441 R 272560 CDS YP_108314.1 53719328 3092243 complement(2018070..2019230) 1 NC_006350.1 Similar to Aeromonas jandaei L-allo-threonine aldolase LtaA SWALL:LTAA_AERJA (SWALL:O07051) (338 aa) fasta scores: E(): 4.2e-54, 50.59% id in 334 aa, and to Escherichia coli low-specificity L-threonine aldolase LtaE or b0870 SWALL:LTAE_ECOLI (SWALL:P75823) (333 aa) fasta scores: E(): 6.7e-41, 40.58% id in 340 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; threonine aldolase 2019230 3092243 BPSL1714 Burkholderia pseudomallei K96243 threonine aldolase YP_108314.1 2018070 R 272560 CDS YP_108315.1 53719329 3092244 complement(2019273..2021957) 1 NC_006350.1 Similar to full length of Rhizobium loti fusion protein contains ligase and probable arginosuccinate lyase msi203 SWALL:CAD31608 (EMBL:AL672113) (899 aa) fasta scores: E(): 5.4e-96, 38.52% id in 911 aa, and C-terminal region similar to Escherichia coli argininosuccinate lyase ArgH or b3960 SWALL:ARLY_ECOLI (SWALL:P11447) (457 aa) fasta scores: E(): 1.2e-25, 32.44% id in 376 aa; argininosuccinate lyase 2021957 3092244 BPSL1715 Burkholderia pseudomallei K96243 argininosuccinate lyase YP_108315.1 2019273 R 272560 CDS YP_108316.1 53719330 3091623 complement(2022010..2023125) 1 NC_006350.1 Similar to Rhizobium loti cysteine synthase mll9227 SWALL:Q981U9 (EMBL:AP003015) (351 aa) fasta scores: E(): 4.2e-53, 45.74% id in 341 aa, and to Alcaligenes eutrophus cysteine synthase CysM SWALL:CYSM_ALCEU (SWALL:Q44004) (339 aa) fasta scores: E(): 9.2e-16, 31.35% id in 303 aa; cysteine synthase 2023125 3091623 BPSL1716 Burkholderia pseudomallei K96243 cysteine synthase YP_108316.1 2022010 R 272560 CDS YP_108317.1 53719331 3091624 complement(2023134..2023775) 1 NC_006350.1 hypothetical protein 2023775 3091624 BPSL1717 Burkholderia pseudomallei K96243 hypothetical protein YP_108317.1 2023134 R 272560 CDS YP_108318.1 53719332 3094603 complement(2023772..2025004) 1 NC_006350.1 Similar to Streptomyces coelicolor transport protein sco1457 or scl6.14C SWALL:Q9L102 (EMBL:AL159139) (413 aa) fasta scores: E(): 7.1e-12, 26.75% id in 385 aa, and to Escherichia coli hypothetical protein YfcJ or b2322 SWALL:YFCJ_ECOLI (SWALL:P77549) (392 aa) fasta scores: E(): 1.7e-05, 23.7% id in 405 aa; hypothetical protein 2025004 3094603 BPSL1718 Burkholderia pseudomallei K96243 hypothetical protein YP_108318.1 2023772 R 272560 CDS YP_108319.1 53719333 3094604 complement(2025058..2025975) 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein mll9228 SWALL:Q981U8 (EMBL:AP003015) (329 aa) fasta scores: E(): 7.2e-31, 38.46% id in 299 aa, and to Bacillus thuringiensis possible kinase pbt101 SWALL:CAD30141 (EMBL:AL731825) (299 aa) fasta scores: E(): 1.4e-17, 30.03% id in 283 aa; kinase 2025975 3094604 BPSL1719 Burkholderia pseudomallei K96243 kinase YP_108319.1 2025058 R 272560 CDS YP_108320.1 53719334 3093740 complement(2025972..2027372) 1 NC_006350.1 Similar to Escherichia coli argininosuccinate lyase ArgH or b3960 SWALL:ARLY_ECOLI (SWALL:P11447) (457 aa) fasta scores: E(): 7.9e-63, 43.26% id in 453 aa, and to Bacillus subtilis argininosuccinate lyase ArgH SWALL:ARLY_BACSU (SWALL:O34858) (461 aa) fasta scores: E(): 1.8e-70, 44.13% id in 460 aa; argininosuccinate lyase 2027372 3093740 BPSL1720 Burkholderia pseudomallei K96243 argininosuccinate lyase YP_108320.1 2025972 R 272560 CDS YP_108321.1 53719335 3093741 complement(2027369..2028583) 1 NC_006350.1 Similar to Streptomyces clavuligerus argininosuccinate synthase ArgG SWALL:ASSY_STRCL (SWALL:P50986) (397 aa) fasta scores: E(): 8.4e-49, 35.78% id in 394 aa, and to Thermoanaerobacter tengcongensis argininosuccinate synthase tte2494 SWALL:Q8R7C2 (EMBL:AE013190) (410 aa) fasta scores: E(): 1.9e-70, 44.92% id in 394 aa; argininosuccinate synthase 2028583 3093741 BPSL1721 Burkholderia pseudomallei K96243 argininosuccinate synthase YP_108321.1 2027369 R 272560 CDS YP_108322.1 53719336 3094289 complement(2028624..2029442) 1 NC_006350.1 Similar to Bordetella bronchiseptica formyl transferase bblps1.05 SWALL:O87978 (EMBL:AJ007747) (274 aa) fasta scores: E(): 2.8e-08, 24.21% id in 256 aa, and to Streptomyces coelicolor formyltransferase sco0499 or scf34.18 SWALL:Q9RK07 (EMBL:AL109974) (315 aa) fasta scores: E(): 1e-07, 26.14% id in 218 aa; formyl transferase 2029442 3094289 BPSL1722 Burkholderia pseudomallei K96243 formyl transferase YP_108322.1 2028624 R 272560 CDS YP_108323.1 53719337 3094290 complement(2029498..2030598) 1 NC_006350.1 hypothetical protein 2030598 3094290 BPSL1723 Burkholderia pseudomallei K96243 hypothetical protein YP_108323.1 2029498 R 272560 CDS YP_108324.1 53719338 3092858 complement(2030608..2031618) 1 NC_006350.1 Similar to Anabaena sp. histidinol-phosphate aminotransferase 1 HisC1 or alr2092 SWALL:HI81_ANASP (SWALL:Q8YV89) (353 aa) fasta scores: E(): 3.1e-20, 31.17% id in 324 aa, and to Halobacterium volcanii histidinol-phosphate aminotransferase HisC SWALL:HIS8_HALVO (SWALL:P17736) (361 aa) fasta scores: E(): 7.6e-18, 30.74% id in 322 aa; histidinol-phosphate aminotransferase 2031618 3092858 BPSL1724 Burkholderia pseudomallei K96243 histidinol-phosphate aminotransferase YP_108324.1 2030608 R 272560 CDS YP_108325.1 53719339 3092859 complement(2031680..2032564) 1 NC_006350.1 Full length similar to C-terminal region of Drosophila melanogaster CG13902 protein SWALL:Q9W0M3 (EMBL:AE003469) (394 aa) fasta scores: E(): 7.6e-16, 28.68% id in 244 aa, and C-terminal region similar to C-terminal region of Caulobacter crescentus PasS1-related protein cc1001 SWALL:Q9A9H9 (EMBL:AE005778) (344 aa) fasta scores: E(): 8.7e-08, 29.95% id in 207 aa. Note: Most of the database hits are to eukaryotic entries; hypothetical protein 2032564 3092859 BPSL1725 Burkholderia pseudomallei K96243 hypothetical protein YP_108325.1 2031680 R 272560 CDS YP_108326.1 53719340 3094659 complement(2032551..2032775) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2412 SWALL:Q9I169 (EMBL:AE004668) (72 aa) fasta scores: E(): 1.5e-09, 43.07% id in 65 aa, and to Ralstonia solanacearum hypothetical protein rsp0640 or rs03727 SWALL:Q8XS41 (EMBL:AL646079) (68 aa) fasta scores: E(): 7.4e-08, 44.44% id in 54 aa; hypothetical protein 2032775 3094659 BPSL1726 Burkholderia pseudomallei K96243 hypothetical protein YP_108326.1 2032551 R 272560 CDS YP_108327.1 53719341 3094660 2033810..2035639 1 NC_006350.1 Full length similar to the C-terminal regions of Amycolatopsis mediterranei peptide synthetase BpsC SWALL:Q939Y9 (EMBL:Y16952) (1858 aa) fasta scores: E(): 3.3e-07, 25.55% id in 626 aa, and of Streptomyces pristinaespiralis pristinamycin I synthase 3 and 4 SnbDE SWALL:O07944 (EMBL:Y11548) (4848 aa) fasta scores: E(): 3.7e-07, 26.49% id in 585 aa; non-ribosomal peptide synthase 2035639 3094660 BPSL1727 Burkholderia pseudomallei K96243 non-ribosomal peptide synthase YP_108327.1 2033810 D 272560 CDS YP_108328.1 53719342 3092778 complement(2036054..2037277) 1 NC_006350.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.1e-21, 30.44% id in 404 aa, and to Comamonas acidovorans outer membrane porin protein 32 precursor Omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 2.1e-09, 28.32% id in 399 aa; exported porin 2037277 3092778 BPSL1728 Burkholderia pseudomallei K96243 exported porin YP_108328.1 2036054 R 272560 CDS YP_108329.1 53719343 3092779 2037625..2038425 1 NC_006350.1 Similar to Rhizobium meliloti transcription regulator protein r00348 or smc00429 SWALL:Q92SM3 (EMBL:AL591783) (269 aa) fasta scores: E(): 3.1e-35, 44.52% id in 265 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0686 or rs01763 SWALL:Q8XRZ5 (EMBL:AL646080) (274 aa) fasta scores: E(): 5.5e-35, 47.05% id in 255 aa; AraC family transcriptional regulator 2038425 3092779 BPSL1729 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_108329.1 2037625 D 272560 CDS YP_108330.1 53719344 3093918 2038590..2039528 1 NC_006350.1 Similar to Rhizobium meliloti transmembrane protein r00347 or smc00428 SWALL:Q92SM4 (EMBL:AL591783) (298 aa) fasta scores: E(): 5.2e-43, 48.51% id in 303 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1953 or rs03527 SWALL:Q8XY10 (EMBL:AL646067) (336 aa) fasta scores: E(): 9e-20, 31.93% id in 310 aa; transmembrane protein 2039528 3093918 BPSL1730 Burkholderia pseudomallei K96243 transmembrane protein YP_108330.1 2038590 D 272560 CDS YP_108331.1 53719345 3092763 complement(2039719..2040231) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 chemotaxis protein CheW or b1887 or z2941 or ecs2597 SWALL:CHEW_ECOLI (SWALL:P07365) (167 aa) fasta scores: E(): 4.1e-30, 59.86% id in 147 aa, and to Burkholderia pseudomallei chemotaxis protein CheW SWALL:O05183 (EMBL:U92493) (175 aa) fasta scores: E(): 9.4e-32, 57.31% id in 164 aa. Note: Also similar to BPSL3305 cheW (176 aa) fasta scores: E(): 9.3e-31, 60.131% identity in 153 aa overlap; chemotaxis protein CheW 2040231 cheW2 3092763 cheW2 Burkholderia pseudomallei K96243 chemotaxis protein CheW YP_108331.1 2039719 R 272560 CDS YP_108332.1 53719346 3093919 complement(2040269..2042011) 1 NC_006350.1 Similar to Ralstonia solanacearum probable methyl-accepting chemotaxis I MCP-I serine chemoreceptor protein transmembrane CheD1 or rsp0507 or rs00386 SWALL:Q8XSG9 (EMBL:AL646079) (600 aa) fasta scores: E(): 3e-52, 43.88% id in 613 aa, and to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 9.1e-47, 40.85% id in 563 aa; methyl-accepting chemotaxis citrate transducer 2042011 3093919 BPSL1732 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis citrate transducer YP_108332.1 2040269 R 272560 CDS YP_108333.1 53719347 3091918 complement(2042724..2042912) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc3311 or rs02540 SWALL:Q8XU82 (EMBL:AL646074) (65 aa) fasta scores: E(): 0.015, 40.67% id in 59 aa; hypothetical protein 2042912 3091918 BPSL1733 Burkholderia pseudomallei K96243 hypothetical protein YP_108333.1 2042724 R 272560 CDS YP_108334.1 53719348 3091919 2043236..2045275 1 NC_006350.1 activates fatty acids by binding to coenzyme A; AMP-binding protein 2045275 3091919 BPSL1734 Burkholderia pseudomallei K96243 AMP-binding protein YP_108334.1 2043236 D 272560 CDS YP_108335.1 53719349 3093699 2045352..2046755 1 NC_006350.1 Similar to Xanthomonas campestris drug resistance translocase YieO or xcc2362 SWALL:AAM41640 (EMBL:AE012345) (476 aa) fasta scores: E(): 3.5e-67, 44.58% id in 462 aa, and to Rhizobium loti multidrug efflux protein mll8348 SWALL:Q983F7 (EMBL:AP003013) (473 aa) fasta scores: E(): 1.5e-63, 42.29% id in 461 aa; transport system membrane protein 2046755 3093699 BPSL1735 Burkholderia pseudomallei K96243 transport system membrane protein YP_108335.1 2045352 D 272560 CDS YP_108336.1 53719350 3093700 complement(2047096..2047866) 1 NC_006350.1 Similar to Escherichia coli biotin synthesis protein BioC or b0777 SWALL:BIOC_ECOLI (SWALL:P12999) (251 aa) fasta scores: E(): 1.2e-05, 36.36% id in 110 aa, and to Brucella melitensis ubiquinone/menaquinone biosynthesis methyltransferase UbiE bmei1834 SWALL:Q8YEP4 (EMBL:AE009616) (262 aa) fasta scores: E(): 2e-40, 47.69% id in 239 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; methyltransferase 2047866 3093700 BPSL1736 Burkholderia pseudomallei K96243 methyltransferase YP_108336.1 2047096 R 272560 CDS YP_108337.1 53719351 3093342 2048228..2049166 1 NC_006350.1 Similar to Brucella melitensis glycine betaine-binding protein precursor bmei1725 SWALL:Q8YF02 (EMBL:AE009606) (304 aa) fasta scores: E(): 1.3e-70, 64.35% id in 303 aa, and to Agrobacterium tumefaciens ABC transporter substrate binding protein atu0199 or agr_c_337 SWALL:Q8UIU3 (EMBL:AE008993) (303 aa) fasta scores: E(): 3.7e-68, 63.48% id in 304 aa; ABC transporter exported protein 2049166 3093342 BPSL1737 Burkholderia pseudomallei K96243 ABC transporter exported protein YP_108337.1 2048228 D 272560 CDS YP_108338.1 53719352 3093343 2049223..2050383 1 NC_006350.1 Similar to Rhizobium loti ABC transporter permease mlr8414 SWALL:Q983A6 (EMBL:AP003014) (387 aa) fasta scores: E(): 1.5e-64, 52.63% id in 380 aa, and to Brucella melitensis glycine betaine/L-proline transport system permease bmei1726 SWALL:Q8YF01 (EMBL:AE009606) (386 aa) fasta scores: E(): 4.9e-58, 50.65% id in 381 aa; ABC transporter membrane protein 2050383 3093343 BPSL1738 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_108338.1 2049223 D 272560 CDS YP_108339.1 53719353 3094442 2050380..2051318 1 NC_006350.1 Similar to Rhizobium meliloti choline uptake ABC transporter ATP-binding protein rb0812 or smb21146 SWALL:Q92V97 (EMBL:AL603645) (312 aa) fasta scores: E(): 2e-61, 61.93% id in 310 aa, and to Escherichia coli hypothetical ABC transporter ATP-binding protein YehX or b2129 SWALL:YEHX_ECOLI (SWALL:P33360) (308 aa) fasta scores: E(): 6.3e-44, 48.54% id in 309 aa; ABC transporter ATP-binding protein 2051318 3094442 BPSL1739 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_108339.1 2050380 D 272560 CDS YP_108340.1 53719354 3094443 2051315..2052133 1 NC_006350.1 Similar to Rhizobium loti ABC transporter permease mlr8416 SWALL:Q983A4 (EMBL:AP003014) (249 aa) fasta scores: E(): 1.2e-46, 61.6% id in 237 aa, and to Yersinia pestis ABC transport integral membrane subunit ypo1199 SWALL:Q8ZGT0 (EMBL:AJ414147) (278 aa) fasta scores: E(): 5.9e-29, 49.32% id in 223 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; ABC transporter membrane protein 2052133 3094443 BPSL1740 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_108340.1 2051315 D 272560 CDS YP_108341.1 53719355 3093374 2053356..2053688 1 NC_006350.1 No significant database matches. Very low and limited similarity to parts of Oryza sativa hypothetical 20.6 kDa protein osjnba0015i18.3 SWALL:Q8S7C0 (EMBL:AC090482) (191 aa) fasta scores: E(): 6.9, 51.72% id in 29 aa; hypothetical protein 2053688 3093374 BPSL1741 Burkholderia pseudomallei K96243 hypothetical protein YP_108341.1 2053356 D 272560 CDS YP_108342.1 53719356 3092544 2053849..2055309 1 NC_006350.1 Similar to Pseudomonas aeruginosa arginine/ornithine antiporter ArcD or pa5170 SWALL:ARCD_PSEAE (SWALL:P18275) (482 aa) fasta scores: E(): 5.3e-140, 78.58% id in 481 aa, and to Clostridium perfringens arginine/ornithine antiporter cpe0170 SWALL:ARCD_CLOPE (SWALL:Q46170) (478 aa) fasta scores: E(): 2.4e-89, 51.8% id in 471 aa; arginine/ornithine antiporter 2055309 arcD 3092544 arcD Burkholderia pseudomallei K96243 arginine/ornithine antiporter YP_108342.1 2053849 D 272560 CDS YP_108343.1 53719357 3092909 2055327..2056583 1 NC_006350.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 2056583 arcA 3092909 arcA Burkholderia pseudomallei K96243 arginine deiminase YP_108343.1 2055327 D 272560 CDS YP_108344.1 53719358 3092910 2056648..2057658 1 NC_006350.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 2057658 arcB 3092910 arcB Burkholderia pseudomallei K96243 ornithine carbamoyltransferase YP_108344.1 2056648 D 272560 CDS YP_108345.1 53719359 3091935 2057747..2058685 1 NC_006350.1 reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 2058685 arcC 3091935 arcC Burkholderia pseudomallei K96243 carbamate kinase YP_108345.1 2057747 D 272560 CDS YP_108346.1 53719360 3093375 complement(2058928..2059722) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1330 SWALL:Q9I414 (EMBL:AE004562) (259 aa) fasta scores: E(): 1.3e-57, 61.62% id in 258 aa, and to Methanosarcina acetivorans short chain dehydrogenase ma1321 SWALL:Q8TR63 (EMBL:AE010801) (269 aa) fasta scores: E(): 1.2e-41, 46.66% id in 255 aa; short chain dehydrogenase 2059722 3093375 BPSL1746 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_108346.1 2058928 R 272560 CDS YP_108347.1 53719361 3094233 complement(2059719..2060168) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1329 SWALL:Q9I415 (EMBL:AE004562) (143 aa) fasta scores: E(): 5.2e-18, 53.73% id in 134 aa, and to Burkholderia sp. RP007 hypothetical 15.7 kDa protein PhnX SWALL:Q9RB84 (EMBL:AF112137) (149 aa) fasta scores: E(): 1.5e-09, 42.33% id in 137 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; hypothetical protein 2060168 3094233 BPSL1747 Burkholderia pseudomallei K96243 hypothetical protein YP_108347.1 2059719 R 272560 CDS YP_108348.1 53719362 3094234 2060266..2061186 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1328 SWALL:Q9I416 (EMBL:AE004562) (302 aa) fasta scores: E(): 3.2e-75, 67.79% id in 295 aa, and to Rhizobium meliloti transcription regulator protein r00290 or smc00370 SWALL:Q92SS5 (EMBL:AL591783) (296 aa) fasta scores: E(): 9.7e-34, 38.3% id in 295 aa; LysR family transcriptional regulator 2061186 3094234 BPSL1748 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108348.1 2060266 D 272560 CDS YP_108349.1 53719363 3092879 2061471..2062175 1 NC_006350.1 Similar to Rhizobium loti glutathione S-transferase mlr4954 SWALL:Q98CX9 (EMBL:AP003005) (234 aa) fasta scores: E(): 5.3e-65, 68.67% id in 233 aa, and to Burkholderia cepacia hypothetical 23.3 kDa protein SWALL:Q45073 (EMBL:U19883) (205 aa) fasta scores: E(): 5.4e-35, 50.95% id in 210 aa, and to Escherichia coli hypothetical GST-like protein YfcG or b2302 SWALL:YFCG_ECOLI (SWALL:P77526) (215 aa) fasta scores: E(): 3.3e-29, 45.71% id in 210 aa; glutathione S-transferase 2062175 3092879 BPSL1749 Burkholderia pseudomallei K96243 glutathione S-transferase YP_108349.1 2061471 D 272560 CDS YP_108350.1 53719364 3092880 2062731..2063270 1 NC_006350.1 Similar to Xanthomonas campestris transcriptional regulator MarR/EmrR family xcc0435 SWALL:AAM39753 (EMBL:AE012141) (162 aa) fasta scores: E(): 2.2e-15, 33.33% id in 156 aa, and to Caulobacter crescentus transcriptional regulator, MarR family cc2188 SWALL:Q9A6A6 (EMBL:AE005891) (144 aa) fasta scores: E(): 3.8e-08, 33.57% id in 140 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; MarR family transcriptional regulator 2063270 3092880 BPSL1750 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_108350.1 2062731 D 272560 CDS YP_108351.1 53719365 3093906 2063491..2064606 1 NC_006350.1 Similar to Ralstonia solanacearum amino-acid transport signal peptide protein rsc3300 or rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 1.4e-50, 43.92% id in 362 aa, and to Rhizobium meliloti leucine-specific binding protein precursor LivK or r02480 or smc01946 SWALL:Q926C5 (EMBL:AL591790) (372 aa) fasta scores: E(): 1.2e-33, 34.07% id in 361 aa; amino-acid transport-related exported protein 2064606 3093906 BPSL1751 Burkholderia pseudomallei K96243 amino-acid transport-related exported protein YP_108351.1 2063491 D 272560 CDS YP_108352.1 53719366 3093907 complement(2064914..2065408) 1 NC_006350.1 Similar to Erwinia chrysanthemi regulatory protein PecS SWALL:PECS_ERWCH (SWALL:P42195) (166 aa) fasta scores: E(): 6.9e-23, 45.86% id in 157 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2325 or rs01223 SWALL:Q8XWZ3 (EMBL:AL646069) (165 aa) fasta scores: E(): 4e-47, 80.36% id in 163 aa; MarR family transcriptional regulator 2065408 3093907 BPSL1752 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_108352.1 2064914 R 272560 CDS YP_108353.1 53719367 3092318 2065532..2066716 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable MFS transporter pa0273 SWALL:Q9I6L7 (EMBL:AE004465) (404 aa) fasta scores: E(): 5e-48, 46.15% id in 377 aa, and to Escherichia coli cyanate transport protein CynX or b0341 SWALL:CYNX_ECOLI (SWALL:P17583) (384 aa) fasta scores: E(): 6.8e-41, 38.66% id in 375 aa; transport-related membrane protein 2066716 3092318 BPSL1753 Burkholderia pseudomallei K96243 transport-related membrane protein YP_108353.1 2065532 D 272560 CDS YP_108354.1 53719368 3092319 2066841..2068412 1 NC_006350.1 Similar to Bacillus subtilis YngK SWALL:Q9R9I7 (EMBL:AF184956) (510 aa) fasta scores: E(): 3.3e-96, 50.4% id in 494 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical lipoprotein YddW precursor or b1491 or z2217 or ecs2096 SWALL:YDDW_ECOLI (SWALL:P76130) (439 aa) fasta scores: E(): 5.7e-43, 37.64% id in 433 aa; lipoprotein 2068412 3092319 BPSL1754 Burkholderia pseudomallei K96243 lipoprotein YP_108354.1 2066841 D 272560 CDS YP_108355.1 53719369 3094850 complement(2068491..2069216) 1 NC_006350.1 Similar to Rhodococcus erythropolis precorrin-4 C11-methyltransferase CobM SWALL:COBM_RHOER (SWALL:Q53138) (249 aa) fasta scores: E(): 3.3e-43, 52.69% id in 241 aa, and to Pseudomonas denitrificans precorrin-4 C11-methyltransferase CobM SWALL:COBM_PSEDE (SWALL:P21922) (253 aa) fasta scores: E(): 1.1e-41, 52.43% id in 246 aa; precorrin-4 C11-methyltransferase 2069216 cobM 3094850 cobM Burkholderia pseudomallei K96243 precorrin-4 C11-methyltransferase YP_108355.1 2068491 R 272560 CDS YP_108356.1 53719370 3092655 complement(2069555..2070283) 1 NC_006350.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 2070283 cobK 3092655 cobK Burkholderia pseudomallei K96243 cobalt-precorrin-6x reductase YP_108356.1 2069555 R 272560 CDS YP_108357.1 53719371 3094469 complement(2070286..2071377) 1 NC_006350.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 2071377 cbiD 3094469 cbiD Burkholderia pseudomallei K96243 cobalt-precorrin-6A synthase YP_108357.1 2070286 R 272560 CDS YP_108358.1 53719372 3092208 complement(2071377..2072603) 1 NC_006350.1 decarboxylating; Similar to Pseudomonas denitrificans precorrin-6Y C5,15-methyltransferase [decarboxylating] cobL SWALL:COBL_PSEDE (SWALL:P21921) (413 aa) fasta scores: E(): 7.9e-67, 49.62% id in 401 aa, and to Brucella melitensis precorrin-6Y C5,15-methyltransferase bmei0716 SWALL:Q8YHT0 (EMBL:AE009513) (401 aa) fasta scores: E(): 1.9e-90, 61.71% id in 397 aa; precorrin-6Y C5,15-methyltransferase 2072603 cobL 3092208 cobL Burkholderia pseudomallei K96243 precorrin-6Y C5,15-methyltransferase YP_108358.1 2071377 R 272560 CDS YP_108359.1 53719373 3094470 2073001..2074449 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable oxidoreductase pa2906 SWALL:Q9HZU1 (EMBL:AE004716) (486 aa) fasta scores: E(): 2.4e-32, 50.53% id in 465 aa, and to Physcomitrella patens ferredoxin-nitrite reductase Nii1 SWALL:BAB92078 (EMBL:AB074427) (602 aa) fasta scores: E(): 8.9e-13, 27.57% id in 417 aa. Note : This CDS has most of its database hits to eukaryotic entries; oxidoreductase 2074449 3094470 BPSL1759 Burkholderia pseudomallei K96243 oxidoreductase YP_108359.1 2073001 D 272560 CDS YP_108360.1 53719374 3093186 2074442..2075068 1 NC_006350.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 2075068 cobH 3093186 cobH Burkholderia pseudomallei K96243 precorrin-8X methylmutase YP_108360.1 2074442 D 272560 CDS YP_108361.1 53719375 3093187 2075065..2075799 1 NC_006350.1 catalyzes the formation of precorrin-3 from precorrin-2; precorrin-2 C20-methyltransferase 2075799 cobI 3093187 cobI Burkholderia pseudomallei K96243 precorrin-2 C20-methyltransferase YP_108361.1 2075065 D 272560 CDS YP_108362.1 53719376 3092654 2075796..2077646 1 NC_006350.1 Similar to Pseudomonas denitrificans precorrin-3b C17-methyltransferase CobJ SWALL:COBJ_PSEDE (SWALL:P21640) (254 aa) fasta scores: E(): 1.1e-35, 52.2% id in 249 aa, and to C-terminal region to Mycobacterium tuberculosis cobalamin biosynthesis protein rv2066 or mt2126 or mtcy49.05 SWALL:COBI_MYCTU (SWALL:Q10677) (508 aa) fasta scores: E(): 1.8e-31, 40% id in 365 aa; precorrin-3B C17-methyltransferase 2077646 cobJ 3092654 cobJ Burkholderia pseudomallei K96243 precorrin-3B C17-methyltransferase YP_108362.1 2075796 D 272560 CDS YP_108363.1 53719377 3093420 2077979..2079352 1 NC_006350.1 Similar to Aeromonas sp chitinase II precursor SWALL:Q59145 (EMBL:D31818) (542 aa) fasta scores: E(): 1.7e-30, 34.61% id in 468 aa, and to the C-terminal region of Escherichia coli probable bifunctional chitinase/lysozyme precursor ChiA or b3338 SWALL:CHIA_ECOLI (SWALL:P13656) (897 aa) fasta scores: E(): 9.3e-30, 40.25% id in 318 aa. Note: In the C-terminal region of the E. coli entry is where the chitinase activity resides; exported chitinase 2079352 3093420 BPSL1763 Burkholderia pseudomallei K96243 exported chitinase YP_108363.1 2077979 D 272560 CDS YP_108364.1 53719378 3093421 2079715..2080041 1 NC_006350.1 hypothetical protein 2080041 3093421 BPSL1764 Burkholderia pseudomallei K96243 hypothetical protein YP_108364.1 2079715 D 272560 CDS YP_108365.1 53719379 3093424 complement(2080385..2081071) 1 NC_006350.1 Similar to Xanthomonas axonopodis carboxylesterase xac0619 SWALL:AAM35508 (EMBL:AE011690) (222 aa) fasta scores: E(): 6.3e-39, 50.69% id in 217 aa, and to Pseudomonas fluorescens carboxylesterase 2 EstB SWALL:EST2_PSEFL (SWALL:Q53547) (218 aa) fasta scores: E(): 1.2e-22, 38.53% id in 218 aa; carboxylesterase 2081071 3093424 BPSL1765 Burkholderia pseudomallei K96243 carboxylesterase YP_108365.1 2080385 R 272560 CDS YP_108366.1 53719380 3093425 complement(2081458..2082072) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein PA2941 SWALL:Q9HZQ6 (EMBL:AE004720) (214 aa) fasta scores: E(): 9.7e-15, 37.43% id in 187 aa; hypothetical protein 2082072 3093425 BPSL1766 Burkholderia pseudomallei K96243 hypothetical protein YP_108366.1 2081458 R 272560 CDS YP_108367.1 53719381 3091603 complement(2082153..2083379) 1 NC_006350.1 C-terminal region is similar to Pseudomonas putida magnesium chelatase, subunit CHII PP3506 SWALL:Q88H59 (EMBL:AE016787) (337 aa) fasta scores: E(): 1.9e-40, 53.43% id in 335 aa. Full length CDS is similar to Chromobacterium violaceum probable chelatase CV1570 SWALL:Q7NXQ6 (EMBL:AE016915) (635 aa) fasta scores: E(): 2.8e-28, 44.29% id in 438 aa; magnesium chelatase 2083379 3091603 BPSL1767 Burkholderia pseudomallei K96243 magnesium chelatase YP_108367.1 2082153 R 272560 CDS YP_108368.1 53719382 3091604 complement(2084041..2087886) 1 NC_006350.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 2087886 cobN 3091604 cobN Burkholderia pseudomallei K96243 cobaltochelatase subunit CobN YP_108368.1 2084041 R 272560 CDS YP_108369.1 53719383 3093490 complement(2087953..2089026) 1 NC_006350.1 Similar to Pseudomonas denitrificans CobW protein SWALL:COBW_PSEDE (SWALL:P29937) (353 aa) fasta scores: E(): 2.1e-62, 50% id in 348 aa, and to Agrobacterium tumefaciens cobalamin synthesis related protein atu2805 or agr_c_5088 SWALL:Q8UBP6 (EMBL:AE009228) (345 aa) fasta scores: E(): 1.1e-58, 49.85% id in 335 aa; cobalamin biosynthesis-like protein 2089026 cobW 3093490 cobW Burkholderia pseudomallei K96243 cobalamin biosynthesis-like protein YP_108369.1 2087953 R 272560 CDS YP_108370.1 53719384 3094455 complement(2089148..2090209) 1 NC_006350.1 Similar to Alcaligenes eutrophus high-affinity nickel transport protein HoxN SWALL:HOXN_ALCEU (SWALL:P23516) (351 aa) fasta scores: E(): 4.3e-78, 58.11% id in 339 aa, and to Bradyrhizobium japonicum hydrogenase nickel incorporation protein HupN SWALL:HUPN_BRAJA (SWALL:Q45247) (381 aa) fasta scores: E(): 1e-61, 54.23% id in 319 aa; high-affinity nickel transport protein 2090209 hoxN 3094455 hoxN Burkholderia pseudomallei K96243 high-affinity nickel transport protein YP_108370.1 2089148 R 272560 CDS YP_108371.1 53719385 3093779 2091314..2091766 1 NC_006350.1 catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG 2091766 3093779 BPSL1771 Burkholderia pseudomallei K96243 cobalamin biosynthesis protein CbiG YP_108371.1 2091314 D 272560 CDS YP_108372.1 53719386 3094851 2091825..2092427 1 NC_006350.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 2092427 cobO 3094851 cobO Burkholderia pseudomallei K96243 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_108372.1 2091825 D 272560 CDS YP_108373.1 53719387 3094797 2092432..2094039 1 NC_006350.1 Similar to Pseudomonas aeruginosa cobyrinic acid A,C-diamide synthase CobB or pa1273 SWALL:COBB_PSEAE (SWALL:Q9I471) (435 aa) fasta scores: E(): 2.8e-48, 49.81% id in 528 aa, and to Bacillus megaterium cobyrinic acid A,C-diamide synthase CobB or CbiA SWALL:COBB_BACME (SWALL:O87698) (460 aa) fasta scores: E(): 4.4e-16, 29.29% id in 536 aa. Note: This CDS contains an unique region from approximately residue 225 to approximately residue 340 that has no similarity to any of the database matches; cobyrinic acid A,C-diamide synthase 2094039 cobB 3094797 cobB Burkholderia pseudomallei K96243 cobyrinic acid A,C-diamide synthase YP_108373.1 2092432 D 272560 CDS YP_108374.1 53719388 3093780 complement(2094346..2095185) 1 NC_006350.1 Similar to Pseudomonas aeruginosa pyoverdine synthetase F PvdF SWALL:P72114 (EMBL:U07359) (275 aa) fasta scores: E(): 2.5e-78, 73.89% id in 272 aa, and to Burkholderia cepacia ornibactin synthetase F PvdF SWALL:Q9F479 (EMBL:AF013993) (279 aa) fasta scores: E(): 9.5e-68, 67.64% id in 272 aa; siderophore biosynthesis-like protein 2095185 3093780 BPSL1774 Burkholderia pseudomallei K96243 siderophore biosynthesis-like protein YP_108374.1 2094346 R 272560 CDS YP_108375.1 53719389 3094193 complement(2095250..2097514) 1 NC_006350.1 Similar to Burkholderia cepacia ornibactin receptor precursor OrbA SWALL:Q9F480 (EMBL:AF013993) (755 aa) fasta scores: E(): 5e-203, 68.7% id in 754 aa, and to Erwinia chrysanthemi ferrichrysobactin receptor precursor Ftc SWALL:FCT_ERWCH (SWALL:Q47162) (735 aa) fasta scores: E(): 4.2e-76, 34.5% id in 713 aa; iron uptake receptor 2097514 3094193 BPSL1775 Burkholderia pseudomallei K96243 iron uptake receptor YP_108375.1 2095250 R 272560 CDS YP_108376.1 53719390 3094194 complement(2097511..2098917) 1 NC_006350.1 Similar to Pseudomonas aeruginosa L-ornithine 5-monooxygenase PvdA or Pvd-1 or pa2386 SWALL:PVDA_PSEAE (SWALL:Q51548) (443 aa) fasta scores: E(): 2.3e-63, 48.01% id in 454 aa, and to the C-terminal region of Burkholderia cepacia L-ornithine 5-monooxygenase PvdA SWALL:PVDA_BURCE (SWALL:O51940) (444 aa) fasta scores: E(): 4.6e-124, 77.85% id in 411 aa; L-ornithine 5-monooxygenase 2098917 3094194 BPSL1776 Burkholderia pseudomallei K96243 L-ornithine 5-monooxygenase YP_108376.1 2097511 R 272560 CDS YP_108377.1 53719391 3092437 complement(2099061..2104307) 1 NC_006350.1 Similar to Pseudomonas putida siderophore non-ribosomal peptide synthetase PpsD SWALL:Q9AKS6 (EMBL:AJ310530) (2246 aa) fasta scores: E(): 8.6e-57, 36.03% id in 1751 aa, and to Pseudomonas aeruginosa probable non-ribosomal peptide synthetase pa2402 SWALL:Q9I179 (EMBL:AE004667) (5149 aa) fasta scores: E(): 9e-57, 36.04% id in 1670 aa; siderophore-related non-ribosomal peptide synthase 2104307 3092437 BPSL1777 Burkholderia pseudomallei K96243 siderophore-related non-ribosomal peptide synthase YP_108377.1 2099061 R 272560 CDS YP_108378.1 53719392 3092438 complement(2104329..2114201) 1 NC_006350.1 Similar to Xenorhabdus bovienii peptide synthetase XpsB SWALL:Q8VQF8 (EMBL:AF455810) (3316 aa) fasta scores: E(): 1.7e-106, 29.31% id in 3350 aa, and to Pseudomonas aeruginosa pyoverdine synthetase D PvdD or pa2399 SWALL:Q9I182 (EMBL:AE004666) (2448 aa) fasta scores: E(): 9.9e-93, 36.1% id in 1770 aa; siderophore related no-ribosomal peptide synthase 2114201 3092438 BPSL1778 Burkholderia pseudomallei K96243 siderophore related no-ribosomal peptide synthase YP_108378.1 2104329 R 272560 CDS YP_108379.1 53719393 3091954 2114773..2116518 1 NC_006350.1 Similar to Pseudomonas aeruginosa pyoverdine synthetase E PvdE SWALL:Q51340 (EMBL:U07359) (548 aa) fasta scores: E(): 1.4e-59, 37.7% id in 557 aa, and to Pseudomonas syringae ATP-binding protein SyrD SWALL:SYRD_PSESY (SWALL:P33951) (566 aa) fasta scores: E(): 7.7e-51, 36.92% id in 539 aa; siderophore biosynthesis related ABC transport protein 2116518 3091954 BPSL1779 Burkholderia pseudomallei K96243 siderophore biosynthesis related ABC transport protein YP_108379.1 2114773 D 272560 CDS YP_108380.1 53719394 3091955 2117026..2117601 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0055 SWALL:Q9I777 (EMBL:AE004445) (168 aa) fasta scores: E(): 3.3e-05, 37.5% id in 168 aa; hypothetical protein 2117601 3091955 BPSL1780 Burkholderia pseudomallei K96243 hypothetical protein YP_108380.1 2117026 D 272560 CDS YP_108381.1 53719395 3091530 complement(2117793..2118821) 1 NC_006350.1 Similar to Escherichia coli iron FecB or b4290 SWALL:FECB_ECOLI (SWALL:P15028) (300 aa) fasta scores: E(): 7.5e-10, 30.06% id in 306 aa, and to Anabaena sp. periplasmic iron-compound-binding protein of iron all0388 SWALL:Q8YZR9 (EMBL:AP003582) (300 aa) fasta scores: E(): 9.4e-20, 33.44% id in 296 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; iron transport-related exported protein 2118821 3091530 BPSL1781 Burkholderia pseudomallei K96243 iron transport-related exported protein YP_108381.1 2117793 R 272560 CDS YP_108382.1 53719396 3091531 complement(2118986..2119792) 1 NC_006350.1 Similar to Escherichia coli ferric iron reductase FhuF or b4367 SWALL:FHUF_ECOLI (SWALL:P39405) (262 aa) fasta scores: E(): 4.7e-06, 27.27% id in 242 aa, and to Rhizobium meliloti transport protein r02270 or smc01658 SWALL:Q92ND8 (EMBL:AL591790) (243 aa) fasta scores: E(): 1.2e-06, 27.31% id in 238 aa; iron transport-related membrane protein 2119792 3091531 BPSL1782 Burkholderia pseudomallei K96243 iron transport-related membrane protein YP_108382.1 2118986 R 272560 CDS YP_108383.1 53719397 3093956 complement(2119789..2121909) 1 NC_006350.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 2121909 3093956 BPSL1783 Burkholderia pseudomallei K96243 iron-hydroxamate transporter permease subunit YP_108383.1 2119789 R 272560 CDS YP_108384.1 53719398 3093957 complement(2121906..2122796) 1 NC_006350.1 Similar to Escherichia coli ferric enterobactin transport ATP-binding protein FepC or b0588 SWALL:FEPC_ECOLI (SWALL:P23878) (271 aa) fasta scores: E(): 1.7e-33, 44.57% id in 258 aa, and to Synechocystis sp. iron slr1318 SWALL:P72592 (EMBL:D90899) (268 aa) fasta scores: E(): 8.8e-38, 48.65% id in 261 aa; iron transport-related ATP-binding protein 2122796 3093957 BPSL1784 Burkholderia pseudomallei K96243 iron transport-related ATP-binding protein YP_108384.1 2121906 R 272560 CDS YP_108385.1 53719399 3091936 complement(2122834..2123850) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2304 SWALL:Q9I1H1 (EMBL:AE004656) (362 aa) fasta scores: E(): 3.8e-48, 46.47% id in 312 aa, and to Streptomyces verticillus SyrP-like protein SWALL:Q9FB16 (EMBL:AF210249) (339 aa) fasta scores: E(): 4e-43, 44.05% id in 311 aa; hypothetical protein 2123850 3091936 BPSL1785 Burkholderia pseudomallei K96243 hypothetical protein YP_108385.1 2122834 R 272560 CDS YP_108386.1 53719400 3091937 complement(2123909..2124151) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2412 SWALL:Q9I169 (EMBL:AE004668) (72 aa) fasta scores: E(): 1.5e-15, 63.07% id in 65 aa, and to Mycobacterium tuberculosis MbtH protein or rv2377c or mt2445.1 or mtcy27.03 SWALL:MBTH_MYCTU (SWALL:O05821) (71 aa) fasta scores: E(): 2.8e-10, 46.87% id in 64 aa; hypothetical protein 2124151 3091937 BPSL1786 Burkholderia pseudomallei K96243 hypothetical protein YP_108386.1 2123909 R 272560 CDS YP_108387.1 53719401 3093703 complement(2124207..2124830) 1 NC_006350.1 RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease; extracytoplasmic-function sigma-70 factor 2124830 3093703 BPSL1787 Burkholderia pseudomallei K96243 extracytoplasmic-function sigma-70 factor YP_108387.1 2124207 R 272560 CDS YP_108388.1 53719402 3092666 complement(2125986..2126732) 1 NC_006350.1 Similar to Gallus gallus D-erythrulose reductase Der SWALL:BAB97210 (EMBL:AB049356) (246 aa) fasta scores: E(): 4e-35, 48.78% id in 246 aa, and to Rhizobium meliloti oxidoreductase r02525 or smc01991 SWALL:Q92MT5 (EMBL:AL591791) (241 aa) fasta scores: E(): 1.1e-34, 46.91% id in 243 aa. Note: The majoroty of the databse matches belong to eukayotic organisms; short chain dehydrogenase 2126732 3092666 BPSL1789 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_108388.1 2125986 R 272560 CDS YP_108389.1 53719403 3092667 complement(2128282..2129373) 1 NC_006350.1 Similar to Yersinia pestis zinc-binding dehydrogenase ypo3352 SWALL:Q8ZBQ5 (EMBL:AJ414156) (371 aa) fasta scores: E(): 2.3e-66, 49.43% id in 356 aa, and to Bacillus halodurans sorbitol dehydrogenase bh0189 SWALL:DHSO_BACHD (SWALL:Q9Z9U1) (343 aa) fasta scores: E(): 1.7e-28, 34.35% id in 358 aa; zinc-binding dehydrogenase 2129373 3092667 BPSL1790 Burkholderia pseudomallei K96243 zinc-binding dehydrogenase YP_108389.1 2128282 R 272560 CDS YP_108390.1 53719404 3093021 complement(2129576..2130595) 1 NC_006350.1 Similar to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu4322 or agr_l_1078 SWALL:Q8U7X7 (EMBL:AE009360) (327 aa) fasta scores: E(): 1.3e-63, 64.72% id in 309 aa, and to Escherichia coli, and Escherichia coli O157:H7 ribose transport system permease RbsC or b3750 or z5251 or ecs4692 SWALL:RBSC_ECO57 (SWALL:P04984) (321 aa) fasta scores: E(): 3.4e-43, 47.41% id in 310 aa. Note: this CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 2130595 3093021 BPSL1791 Burkholderia pseudomallei K96243 hypothetical protein YP_108390.1 2129576 R 272560 CDS YP_108391.1 53719405 3093022 complement(2130598..>2132127) 1 NC_006350.1 Low similarity to parts of Microbacterium ammoniaphilum hypothetical 58.7 kDa protein SWALL:P94909 (EMBL:X79027) (529 aa) fasta scores: E(): 5.6e-09, 33.58% id in 396 aa, and to Homo sapiens hypothetical protein dkfzp434d1812 SWALL:Q9H0L6 (EMBL:AL136745) (1170 aa) fasta scores: E(): 7.4e-07, 25.18% id in 552 aa. Note: Most of the database matches belong to eukaryotic entries; hypothetical protein >2132127 3093022 BPSL1792 Burkholderia pseudomallei K96243 hypothetical protein YP_108391.1 2130598 R 272560 CDS YP_108392.1 53719406 3092676 complement(2132189..2133133) 1 NC_006350.1 Similar to Agrobacterium tumefaciens ABC transporter substrate binding protein atu4320 or agr_l_1084 SWALL:Q8U7X9 (EMBL:AE009360) (303 aa) fasta scores: E(): 1e-69, 67.79% id in 295 aa, and to Escherichia coli D-ribose-binding periplasmic protein precursor RbsB or RbsP or PrlB or b3751 SWALL:RBSB_ECOLI (SWALL:P02925) (296 aa) fasta scores: E(): 1.1e-20, 32.33% id in 300 aa; sugar-binding exported protein 2133133 3092676 BPSL1793 Burkholderia pseudomallei K96243 sugar-binding exported protein YP_108392.1 2132189 R 272560 CDS YP_108393.1 53719407 3092677 complement(2133238..2134254) 1 NC_006350.1 Similar to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4319 or agr_l_1086 SWALL:Q8U7Y0 (EMBL:AE009360) (305 aa) fasta scores: E(): 1e-58, 48.96% id in 290 aa, and to Pseudomonas aeruginosa transcriptional regulator MtlR or pa2337 SWALL:Q9I1E1 (EMBL:AE004660) (301 aa) fasta scores: E(): 1.5e-39, 37.5% id in 280 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; AraC family transcriptional regulator 2134254 3092677 BPSL1794 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_108393.1 2133238 R 272560 CDS YP_108394.1 53719408 3094821 2135014..2135730 1 NC_006350.1 hypothetical protein 2135730 3094821 BPSL1795 Burkholderia pseudomallei K96243 hypothetical protein YP_108394.1 2135014 D 272560 CDS YP_108395.1 53719409 3094822 2135807..2137408 1 NC_006350.1 Low similarity to Caulobacter crescentus hypothetical protein cc2711 SWALL:Q9A4W4 (EMBL:AE005937) (585 aa) fasta scores: E(): 4.1e-10, 25.84% id in 530 aa; hypothetical protein 2137408 3094822 BPSL1796 Burkholderia pseudomallei K96243 hypothetical protein YP_108395.1 2135807 D 272560 CDS YP_108396.1 53719410 3094557 2137542..2139305 1 NC_006350.1 Similar to Caulobacter crescentus ABC transporter HlyB/MsbA family cc1314 SWALL:Q9A8N9 (EMBL:AE005806) (643 aa) fasta scores: E(): 2.1e-27, 27.76% id in 587 aa, and to Yersinia pestis ABC transport protein ypo2588 SWALL:Q8ZDI0 (EMBL:AJ414152) (631 aa) fasta scores: E(): 8.3e-26, 26.18% id in 569 aa; ABC transporter membrane protein 2139305 3094557 BPSL1797 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_108396.1 2137542 D 272560 CDS YP_108397.1 53719411 3094558 complement(2139356..2140381) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0498 SWALL:Q9I620 (EMBL:AE004487) (335 aa) fasta scores: E(): 1.1e-13, 23.79% id in 332 aa, and to Yersinia pestis exported protein ypo4040 SWALL:Q8Z9Y9 (EMBL:AJ414160) (328 aa) fasta scores: E(): 2.2e-10, 28.4% id in 345 aa; hypothetical protein 2140381 3094558 BPSL1798 Burkholderia pseudomallei K96243 hypothetical protein YP_108397.1 2139356 R 272560 CDS YP_108398.1 53719412 3091466 complement(2140378..2141127) 1 NC_006350.1 Similar to Escherichia coli O157:H7 fimbrial chaperone YfcS or z3599 or ecs3220 SWALL:Q8XCP6 (EMBL:AE005465) (252 aa) fasta scores: E(): 1.2e-32, 39.59% id in 245 aa, and to Proteus mirabilis chaperone protein PmfD precursor WALL:PMFD_PROMI (SWALL:P53520) (254 aa) fasta scores: E(): 4.4e-29, 36.63% id in 232 aa; fimbrial chaperone 2141127 3091466 BPSL1799 Burkholderia pseudomallei K96243 fimbrial chaperone YP_108398.1 2140378 R 272560 CDS YP_108399.1 53719413 3091467 complement(2141243..2143711) 1 NC_006350.1 Similar to Escherichia coli outer membrane usher protein PapC precursor SWALL:PAPC_ECOLI (SWALL:P07110) (836 aa) fasta scores: E(): 1e-85, 38.1% id in 824 aa, and to Proteus mirabilis outer membrane usher protein PmfC precursor SWALL:PMFC_PROMI (SWALL:P53514) (828 aa) fasta scores: E(): 1.1e-66, 33.66% id in 799 aa; outer membrane usher protein 2143711 3091467 BPSL1800 Burkholderia pseudomallei K96243 outer membrane usher protein YP_108399.1 2141243 R 272560 CDS YP_108400.1 53719414 3091571 complement(2143834..2144346) 1 NC_006350.1 Similar to Escherichia coli type-1 fimbrial protein, A chain precursor FimA or PilA or b4314 SWALL:FM1A_ECOLI (SWALL:P04128) (182 aa) fasta scores: E(): 3.2e-17, 42.62% id in 183 aa, and to Klebsiella pneumoniae fimbrial subunit type 1 precursor SWALL:FM11_KLEPN (SWALL:P12266) (182 aa) fasta scores: E(): 3.2e-17, 42.62% id in 183 aa; type-1 fimbrial protein 2144346 3091571 BPSL1801 Burkholderia pseudomallei K96243 type-1 fimbrial protein YP_108400.1 2143834 R 272560 CDS YP_108401.1 53719415 3091572 complement(2146271..2147821) 1 NC_006350.1 Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 2.3e-59, 46.39% id in 485 aa, and to Xanthomonas axonopodis outer membrane protein OprM or xac2842 SWALL:AAM37687 (EMBL:AE011925) (503 aa) fasta scores: E(): 9.5e-65, 47.54% id in 488 aa; multidrug efflux system membrane lipoprotein 2147821 3091572 BPSL1802 Burkholderia pseudomallei K96243 multidrug efflux system membrane lipoprotein YP_108401.1 2146271 R 272560 CDS YP_108402.1 53719416 3094491 complement(2147818..2150949) 1 NC_006350.1 MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; multidrug efflux protein 2150949 amrB 3094491 amrB Burkholderia pseudomallei K96243 multidrug efflux protein YP_108402.1 2147818 R 272560 CDS YP_108403.1 53719417 3092155 complement(2150966..2152165) 1 NC_006350.1 MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; periplasmic multidrug efflux lipoprotein 2152165 amrA 3092155 amrA Burkholderia pseudomallei K96243 periplasmic multidrug efflux lipoprotein YP_108403.1 2150966 R 272560 CDS YP_108404.1 53719418 3094492 2152309..2152980 1 NC_006350.1 Almost identical to Burkholderia pseudomallei regulator AmrR SWALL:O87934 (EMBL:AF072887) (187 aa) fasta scores: E(): 1e-64, 99.42% id in 173 aa. Similar to Ralstonia solanacearum AcrAB operon repressor transcription regulator protein AcrR or rsc0012 or rs01834 SWALL:Q8Y3G8 (EMBL:AL646057) (219 aa) fasta scores: E(): 4.2e-21, 38.22% id in 225 aa. Note: This CDS is longer than the previously sequenced AmrR in its C-terminal region, it is possible that the previous sequence submitted to the databases had a sequencing error that led to a frameshift after residue 173; TetR family regulatory protein 2152980 amrR 3094492 amrR Burkholderia pseudomallei K96243 TetR family regulatory protein YP_108404.1 2152309 D 272560 CDS YP_108405.1 53719419 3091805 2153499..2154740 1 NC_006350.1 C-terminal region similar to C-terminal region of Brucella melitensis lysostaphin bmei1268 SWALL:Q8YG93 (EMBL:AE009565) (472 aa) fasta scores: E(): 3e-18, 35.1% id in 245 aa, and to Rickettsia prowazekii hypothetical protein rp407 SWALL:Q9ZDC5 (EMBL:AJ235271) (458 aa) fasta scores: E(): 3.4e-18, 29.6% id in 277 aa; peptidase 2154740 3091805 BPSL1806 Burkholderia pseudomallei K96243 peptidase YP_108405.1 2153499 D 272560 CDS YP_108406.1 53719420 3091806 complement(2154782..2155525) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable amino acid permease pa2202 SWALL:Q9I1R5 (EMBL:AE004646) (225 aa) fasta scores: E(): 1.7e-53, 67.11% id in 225 aa, and to Ralstonia solanacearum probable amino acid transmembrane ABC transporter protein rsp0933 or rs05400 SWALL:Q8XRC5 (EMBL:AL646081) (248 aa) fasta scores: E(): 2.2e-28, 41.52% id in 236 aa; amino acid transport system, membrane protein 2155525 3091806 BPSL1807 Burkholderia pseudomallei K96243 amino acid transport system, membrane protein YP_108406.1 2154782 R 272560 CDS YP_108407.1 53719421 3091735 complement(2155528..2156253) 1 NC_006350.1 Similar to Yersinia pestis ABC transporter permease ypo4110 SWALL:Q8Z9T5 (EMBL:AJ414160) (245 aa) fasta scores: E(): 5.8e-51, 59.3% id in 231 aa, and to Pseudomonas aeruginosa probable amino acid permease pa2203 SWALL:Q9I1R4 (EMBL:AE004646) (238 aa) fasta scores: E(): 3.3e-48, 62.23% id in 233 aa; amino acid transport system, membrane protein 2156253 3091735 BPSL1808 Burkholderia pseudomallei K96243 amino acid transport system, membrane protein YP_108407.1 2155528 R 272560 CDS YP_108408.1 53719422 3091736 complement(2156652..2157467) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa2204 SWALL:Q9I1R3 (EMBL:AE004647) (268 aa) fasta scores: E(): 1.2e-70, 68.88% id in 270 aa, and to Escherichia coli cystine-binding periplasmic protein precursor FliY or b1920 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 2e-20, 32.8% id in 253 aa; amino acid transport system, exported protein 2157467 3091736 BPSL1809 Burkholderia pseudomallei K96243 amino acid transport system, exported protein YP_108408.1 2156652 R 272560 CDS YP_108409.1 53719423 3093233 complement(2157757..2158737) 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc0648 or rs01552 SWALL:Q8Y1P2 (EMBL:AL646060) (347 aa) fasta scores: E(): 1.6e-41, 41.64% id in 329 aa; hypothetical protein 2158737 3093233 BPSL1810 Burkholderia pseudomallei K96243 hypothetical protein YP_108409.1 2157757 R 272560 CDS YP_108410.1 53719424 3093234 complement(2158781..2159209) 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc0649 or rs01553 SWALL:Q8Y1P1 (EMBL:AL646060) (144 aa) fasta scores: E(): 3.7e-14, 40.58% id in 138 aa; hypothetical protein 2159209 3093234 BPSL1811 Burkholderia pseudomallei K96243 hypothetical protein YP_108410.1 2158781 R 272560 CDS YP_108411.1 53719425 3093658 complement(2159206..2160219) 1 NC_006350.1 Similar to the central parts of Agrobacterium tumefaciens hypothetical protein atu0215 or agr_c_369 SWALL:Q8UIS7 (EMBL:AE008995) (289 aa) fasta scores: E(): 5.6e-08, 28.62% id in 255 aa, and of Rhizobium loti hypothetical protein mll5605 SWALL:Q98BF1 (EMBL:AP003007) (275 aa) fasta scores: E(): 7e-07, 25.76% id in 260 aa; hypothetical protein 2160219 3093658 BPSL1812 Burkholderia pseudomallei K96243 hypothetical protein YP_108411.1 2159206 R 272560 CDS YP_108412.1 53719426 3093659 complement(2160315..2161259) 1 NC_006350.1 Similar to Ralstonia solanacearum tight adherence TadC-related transmembrane protein rsc0650 or rs01554 SWALL:Q8Y1P0 (EMBL:AL646060) (315 aa) fasta scores: E(): 1.8e-20, 32.23% id in 304 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpI or atu0216 or agr_c_371 SWALL:Q8UIS6 (EMBL:AE008995) (328 aa) fasta scores: E(): 4.1e-19, 30.4% id in 319 aa; fimbriae-related membrane protein 2161259 3093659 BPSL1813 Burkholderia pseudomallei K96243 fimbriae-related membrane protein YP_108412.1 2160315 R 272560 CDS YP_108413.1 53719427 3091544 complement(2161256..2162251) 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein mlr5603 SWALL:Q98BF3 (EMBL:AP003007) (337 aa) fasta scores: E(): 4e-21, 32.46% id in 308 aa, and C-terminal region similar to C-terminal region of Agrobacterium tumefaciens components of type IV pilus CtpH or atu0217 or agr_c_372 SWALL:Q8UIS5 (EMBL:AE008995) (334 aa) fasta scores: E(): 8.8e-20, 32.46% id in 231 aa; hypothetical protein 2162251 3091544 BPSL1814 Burkholderia pseudomallei K96243 hypothetical protein YP_108413.1 2161256 R 272560 CDS YP_108414.1 53719428 3091545 complement(2162248..2163822) 1 NC_006350.1 Similar to Caulobacter crescentus pilus assembly protein CpaF cc2942 SWALL:Q9A496 (EMBL:AE005958) (501 aa) fasta scores: E(): 6.6e-65, 47.03% id in 523 aa, and to Agrobacterium tumefaciens component of type IV pilus CtpG or atu0218 or agr_c_373 SWALL:Q8UIS4 (EMBL:AE008995) (491 aa) fasta scores: E(): 3.4e-60, 45.69% id in 464 aa; fimbriae assembly-like protein 2163822 3091545 BPSL1815 Burkholderia pseudomallei K96243 fimbriae assembly-like protein YP_108414.1 2162248 R 272560 CDS YP_108415.1 53719429 3093313 complement(2163819..2165054) 1 NC_006350.1 Similar to Caulobacter crescentus pilus assembly protein CpaE cc2943 SWALL:Q9A495 (EMBL:AE005958) (517 aa) fasta scores: E(): 1.4e-25, 31.34% id in 386 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpF or atu0219 or agr_c_376 SWALL:Q8UIS3 (EMBL:AE008995) (462 aa) fasta scores: E(): 9.4e-20, 28.64% id in 412 aa; fimbriae assembly-like protein 2165054 3093313 BPSL1816 Burkholderia pseudomallei K96243 fimbriae assembly-like protein YP_108415.1 2163819 R 272560 CDS YP_108416.1 53719430 3093314 complement(2165065..2165478) 1 NC_006350.1 Very low similarity to C-terminal region of Agrobacterium tumefaciens components of type IV pilus CtpE or atu0220 or agr_c_378 SWALL:Q8UIS2 (EMBL:AE008995) (250 aa) fasta scores: E(): 0.47, 45.09% id in 51 aa; lipoprotein 2165478 3093314 BPSL1817 Burkholderia pseudomallei K96243 lipoprotein YP_108416.1 2165065 R 272560 CDS YP_108417.1 53719431 3092532 complement(2165512..2166831) 1 NC_006350.1 Similar to Rhizobium sp. hypothetical 44.3 kDa protein Y4xJ WALL:Y4XJ_RHISN (SWALL:P55702) (423 aa) fasta scores: E(): 4e-52, 39.54% id in 440 aa, and to Escherichia coli protein transport protein precursor HofQ or HopQ or b3391 SWALL:HOFQ_ECOLI (SWALL:P34749) (412 aa) fasta scores: E(): 1.1e-14, 28.42% id in 380 aa; fimbriae assembly-like protein 2166831 3092532 BPSL1818 Burkholderia pseudomallei K96243 fimbriae assembly-like protein YP_108417.1 2165512 R 272560 CDS YP_108418.1 53719432 3092533 complement(2166995..2168047) 1 NC_006350.1 Similar to Caulobacter crescentus hypothetical 29.8 kDa protein cc2946 SWALL:Q9L718 (EMBL:AF229646) (297 aa) fasta scores: E(): 3.8e-11, 31.46% id in 267 aa, and to Rhizobium loti pilus assembly protein, CpaB mlr5595 SWALL:Q98BF8 (EMBL:AP003007) (271 aa) fasta scores: E(): 9.7e-08, 30.04% id in 253 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; fimbriae-assembly-like protein 2168047 3092533 BPSL1819 Burkholderia pseudomallei K96243 fimbriae-assembly-like protein YP_108418.1 2166995 R 272560 CDS YP_108419.1 53719433 3091425 complement(2168060..2168578) 1 NC_006350.1 Similar to Caulobacter crescentus PilD or cc2947 SWALL:Q9L719 (EMBL:AF229646) (170 aa) fasta scores: E(): 3.4e-05, 36.41% id in 173 aa, and to Rhizobium meliloti probable pilus assembly protein CpaA2 or ra0857 or sma1578 SWALL:Q92YL6 (EMBL:AE007272) (170 aa) fasta scores: E(): 0.038, 30.28% id in 142 aa; fimbriae assembly-like protein 2168578 3091425 BPSL1820 Burkholderia pseudomallei K96243 fimbriae assembly-like protein YP_108419.1 2168060 R 272560 CDS YP_108420.1 53719434 3091426 complement(2168604..2168795) 1 NC_006350.1 Similar to Ralstonia solanacearum pilin protein rsp1092 or rs02598 SWALL:Q8XQX6 (EMBL:AL646082) (58 aa) fasta scores: E(): 0.46, 32.72% id in 55 aa, and to Actinobacillus actinomycetemcomitans Flp-1 protein SWALL:Q8RMW9 (EMBL:AF487931) (75 aa) fasta scores: E(): 0.94, 33.33% id in 57 aa; fimbriae assembly-like protein 2168795 3091426 BPSL1821 Burkholderia pseudomallei K96243 fimbriae assembly-like protein YP_108420.1 2168604 R 272560 CDS YP_108421.1 53719435 3094726 complement(2169348..2170319) 1 NC_006350.1 Similar to Xanthomonas axonopodis permease NrtB or xac0827 SWALL:AAM35715 (EMBL:AE011714) (294 aa) fasta scores: E(): 3.2e-63, 63.43% id in 320 aa, and almost full length to Escherichia coli aliphatic sulfonates transport permease SsuC or b0934 SWALL:SSUC_ECOLI (SWALL:P75851) (263 aa) fasta scores: E(): 7.2e-17, 30.15% id in 252 aa; hypothetical protein 2170319 3094726 BPSL1822 Burkholderia pseudomallei K96243 hypothetical protein YP_108421.1 2169348 R 272560 CDS YP_108422.1 53719436 3094727 complement(2170316..2171155) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa2308 SWALL:Q9I1G7 (EMBL:AE004657) (282 aa) fasta scores: E(): 9.4e-60, 68.47% id in 276 aa, and to Synechococcus sp. nitrate transport ATP-binding protein NrtD SWALL:NRTD_SYNP7 (SWALL:P38046) (274 aa) fasta scores: E(): 1.2e-27, 43.29% id in 231 aa; ABC transporter ATP-binding protein 2171155 3094727 BPSL1823 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_108422.1 2170316 R 272560 CDS YP_108423.1 53719437 3092080 complement(2171706..2172752) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2309 SWALL:Q9I1G6 (EMBL:AE004657) (340 aa) fasta scores: E(): 5.5e-85, 66.37% id in 339 aa, and to Xanthomonas campestris ABC transporter substrate binding protein xcc0774 SWALL:AAM40089 (EMBL:AE012177) (347 aa) fasta scores: E(): 5.6e-85, 68.51% id in 324 aa; ABC transporter substrate-binding protein 2172752 3092080 BPSL1824 Burkholderia pseudomallei K96243 ABC transporter substrate-binding protein YP_108423.1 2171706 R 272560 CDS YP_108424.1 53719438 3092081 complement(2173005..2174309) 1 NC_006350.1 Similar to Ralstonia solanacearum alpha-ketoglutarate permease transmembrane protein rsp0075 or rs05546 SWALL:Q8XTN1 (EMBL:AL646076) (437 aa) fasta scores: E(): 2.2e-144, 84.68% id in 431 aa, and to Escherichia coli alpha-ketoglutarate permease KgtP or WitA or b2587 SWALL:KGTP_ECOLI (SWALL:P17448) (432 aa) fasta scores: E(): 4.9e-116, 71.49% id in 414 aa; ABC transporter permease 2174309 3092081 BPSL1825 Burkholderia pseudomallei K96243 ABC transporter permease YP_108424.1 2173005 R 272560 CDS YP_108425.1 53719439 3094431 complement(2174784..2176310) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0586 SWALL:Q9I5V1 (EMBL:AE004494) (517 aa) fasta scores: E(): 1.3e-141, 67.69% id in 486 aa, and to Escherichia coli hypothetical protein YcgB or b1188 SWALL:YCGB_ECOLI (SWALL:P29013) (510 aa) fasta scores: E(): 8.4e-137, 64.12% id in 499 aa; SpoVR family protein 2176310 3094431 BPSL1826 Burkholderia pseudomallei K96243 SpoVR family protein YP_108425.1 2174784 R 272560 CDS YP_108426.1 53719440 3094432 complement(2176466..2177731) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0587 SWALL:Q9I5V0 (EMBL:AE004494) (423 aa) fasta scores: E(): 1.6e-89, 55.1% id in 421 aa, and to Escherichia coli hypothetical protein YeaH or b1784 SWALL:YEAH_ECOLI (SWALL:P76235) (427 aa) fasta scores: E(): 2.6e-86, 53.81% id in 420 aa; hypothetical protein 2177731 3094432 BPSL1827 Burkholderia pseudomallei K96243 hypothetical protein YP_108426.1 2176466 R 272560 CDS YP_108427.1 53719441 3092354 complement(2177855..2179777) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0588 SWALL:Q9I5U9 (EMBL:AE004495) (640 aa) fasta scores: E(): 1.2e-195, 79.03% id in 639 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YeaG or b1783 or z2823 or ecs2492 SWALL:YEAG_ECOLI (SWALL:P77391) (644 aa) fasta scores: E(): 3.9e-189, 75.15% id in 644 aa; hypothetical protein 2179777 3092354 BPSL1828 Burkholderia pseudomallei K96243 hypothetical protein YP_108427.1 2177855 R 272560 CDS YP_108428.1 53719442 3092355 complement(2180671..2182575) 1 NC_006350.1 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 1.5e-48, 44.32% id in 546 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis I Mcp-I serine chemoreceptor protein transmembrane CheD1 or rsp0507 or rs00386 SWALL:Q8XSG9 (EMBL:AL646079) (600 aa) fasta scores: E(): 4e-66, 50.95% id in 628 aa. Note: Possible alternative start codon at residue 9; methyl-accepting chemotaxis protein 2182575 3092355 BPSL1829 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_108428.1 2180671 R 272560 CDS YP_108429.1 53719443 3094138 complement(2182764..2183738) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ribokinase RbsK or b3752 or z5253 or ecs4694 SWALL:RBSK_ECOLI (SWALL:P05054) (309 aa) fasta scores: E(): 1.2e-33, 44.4% id in 304 aa, and to Pseudomonas aeruginosa ribokinase RbsK or pa1950 SWALL:Q9I2F4 (EMBL:AE004621) (308 aa) fasta scores: E(): 2.9e-50, 58.49% id in 306 aa; ribokinase 2183738 3094138 BPSL1830 Burkholderia pseudomallei K96243 ribokinase YP_108429.1 2182764 R 272560 CDS YP_108430.1 53719444 3094139 complement(2183735..2184766) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ribose operon repressor RbsR or b3753 or z5254 or ecs4695 SWALL:RBSR_ECOLI (SWALL:P25551) (329 aa) fasta scores: E(): 5.6e-41, 40.3% id in 330 aa, and to Pseudomonas aeruginosa ribose operon repressor pa1949 SWALL:Q9I2F5 (EMBL:AE004621) (337 aa) fasta scores: E(): 3e-80, 67.16% id in 332 aa; ribose operon repressor 2184766 3094139 BPSL1831 Burkholderia pseudomallei K96243 ribose operon repressor YP_108430.1 2183735 R 272560 CDS YP_108431.1 53719445 3094134 complement(2184796..2185809) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ribose transport system permease RbsC or b3750 or z5251 or ecs4692 SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 5.3e-31, 39.33% id in 300 aa, and to Pseudomonas aeruginosa membrane protein component of ABC ribose transporter pa1948 SWALL:Q9I2F6 (EMBL:AE004621) (332 aa) fasta scores: E(): 1e-84, 78.59% id in 327 aa; ribose transport system, permease 2185809 3094134 BPSL1832 Burkholderia pseudomallei K96243 ribose transport system, permease YP_108431.1 2184796 R 272560 CDS YP_108432.1 53719446 3094135 complement(2185880..2187451) 1 NC_006350.1 Similar to Escherichia coli ribose transport ATP-binding protein RbsA or b3749 SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 1.9e-55, 41.24% id in 497 aa, and to Pseudomonas aeruginosa ribose transport protein pa1947 SWALL:Q9I2F7 (EMBL:AE004621) (510 aa) fasta scores: E(): 9.6e-112, 70.35% id in 506 aa; ribose transport system, ATP-binding protein 2187451 3094135 BPSL1833 Burkholderia pseudomallei K96243 ribose transport system, ATP-binding protein YP_108432.1 2185880 R 272560 CDS YP_108433.1 53719447 3093446 complement(2187591..2188553) 1 NC_006350.1 Similar to Escherichia coli D-ribose-binding periplasmic protein precursor RbsB or RbsP or PrlB or b3751 SWALL:RBSB_ECOLI (SWALL:P02925) (296 aa) fasta scores: E(): 9.3e-15, 31.49% id in 308 aa, and to Pseudomonas aeruginosa binding protein component precursor of ABC ribose transporter pa1946 SWALL:Q9I2F8 (EMBL:AE004621) (319 aa) fasta scores: E(): 1.6e-78, 75.47% id in 314 aa; ribose transport system, substrate-binding protein 2188553 3093446 BPSL1834 Burkholderia pseudomallei K96243 ribose transport system, substrate-binding protein YP_108433.1 2187591 R 272560 CDS YP_108434.1 53719448 3094539 complement(2188911..2189837) 1 NC_006350.1 Similar to Escherichia coli transcriptional regulator Cbl or b1987 SWALL:CBL_ECOLI (SWALL:Q47083) (316 aa) fasta scores: E(): 2.1e-60, 54.22% id in 308 aa, and to Ralstonia solanacearum cys regulon transcriptional activator transcription regulator protein rsc1348 or rs02871 SWALL:Q8XZP7 (EMBL:AL646064) (327 aa) fasta scores: E(): 1.8e-65, 58.8% id in 301 aa; transcriptional regulator CysB-like protein 2189837 cbl 3094539 cbl Burkholderia pseudomallei K96243 transcriptional regulator CysB-like protein YP_108434.1 2188911 R 272560 CDS YP_108435.1 53719449 3094479 complement(2189907..2190962) 1 NC_006350.1 Similar to Escherichia coli sulfate transport ATP-binding protein CysA or b2422 SWALL:CYSA_ECOLI (SWALL:P16676) (365 aa) fasta scores: E(): 2.9e-55, 58.65% id in 283 aa, and to Ralstonia solanacearum probable sulfate transport ATP-binding ABC transporter protein rsc1347 or rs02870 SWALL:Q8XZP8 (EMBL:AL646064) (372 aa) fasta scores: E(): 2.3e-69, 62.92% id in 356 aa; sulfate transport ATP-binding protein 2190962 cysA 3094479 cysA Burkholderia pseudomallei K96243 sulfate transport ATP-binding protein YP_108435.1 2189907 R 272560 CDS YP_108436.1 53719450 3091488 complement(2190976..2191854) 1 NC_006350.1 Similar to Escherichia coli sulfate transport system permease CysW or b2423 SWALL:CYSW_ECOLI (SWALL:P16702) (291 aa) fasta scores: E(): 4.2e-56, 54.65% id in 258 aa, and to Burkholderia cepacia CysW SWALL:Q93DX9 (EMBL:AF374458) (314 aa) fasta scores: E(): 5e-98, 90.31% id in 289 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; sulfate transport system permease 2191854 cysW 3091488 cysW Burkholderia pseudomallei K96243 sulfate transport system permease YP_108436.1 2190976 R 272560 CDS YP_108437.1 53719451 3092830 complement(2192007..2192900) 1 NC_006350.1 Similar to Escherichia coli sulfate transport system permease CysT or CysU or b2424 SWALL:CYST_ECOLI (SWALL:P16701) (277 aa) fasta scores: E(): 1.1e-50, 48.52% id in 272 aa, and to Ralstonia solanacearum sulfate transport ABC transporter protein rsc1345 or rs02868 SWALL:Q8XZQ0 (EMBL:AL646064) (304 aa) fasta scores: E(): 1.2e-72, 68.38% id in 291 aa; sulfate transport system permease 2192900 cysT 3092830 cysT Burkholderia pseudomallei K96243 sulfate transport system permease YP_108437.1 2192007 R 272560 CDS YP_108438.1 53719452 3093697 complement(2193033..2194016) 1 NC_006350.1 Similar to Escherichia coli sulfate-binding protein precursor Sbp or b3917 SWALL:SUBI_ECOLI (SWALL:P06997) (329 aa) fasta scores: E(): 8.9e-85, 65.01% id in 323 aa, and to Ralstonia solanacearum probable sulfate-binding precursor signal peptide protein rsc1336 or rs02858 SWALL:Q8XZQ9 (EMBL:AL646064) (336 aa) fasta scores: E(): 2.2e-92, 70.76% id in 325 aa; sulfate-binding protein 2194016 sbp 3093697 sbp Burkholderia pseudomallei K96243 sulfate-binding protein YP_108438.1 2193033 R 272560 CDS YP_108439.1 53719453 3094085 2194373..2195020 1 NC_006350.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 2195020 lexA 3094085 lexA Burkholderia pseudomallei K96243 LexA repressor YP_108439.1 2194373 D 272560 CDS YP_108440.1 53719454 3093447 2195083..2195409 1 NC_006350.1 hypothetical protein 2195409 3093447 BPSL1841 Burkholderia pseudomallei K96243 hypothetical protein YP_108440.1 2195083 D 272560 CDS YP_108441.1 53719455 3092257 2195443..2196177 1 NC_006350.1 hypothetical protein 2196177 3092257 BPSL1842 Burkholderia pseudomallei K96243 hypothetical protein YP_108441.1 2195443 D 272560 CDS YP_108442.1 53719456 3092258 complement(2196592..2197083) 1 NC_006350.1 Similar to Sulfolobus solfataricus hypothetical protein sso2778 SWALL:Q97V57 (EMBL:AE006871) (139 aa) fasta scores: E(): 9.9e-07, 25.36% id in 138 aa, and to Methanosarcina acetivorans universal stress protein ma2512 SWALL:Q8TMY3 (EMBL:AE010945) (154 aa) fasta scores: E(): 2.4e-06, 24.63% id in 138 aa. Note: Possible alternative start codon 10 residues upstream of annotated one; stress-like protein 2197083 3092258 BPSL1843 Burkholderia pseudomallei K96243 stress-like protein YP_108442.1 2196592 R 272560 CDS YP_108443.1 53719457 3092478 2197307..2198227 1 NC_006350.1 involved in the export of lipooligosaccharides during nodulation; nodulation ABC transporter NodI 2198227 3092478 BPSL1844 Burkholderia pseudomallei K96243 nodulation ABC transporter NodI YP_108443.1 2197307 D 272560 CDS YP_108444.1 53719458 3092479 2198232..2199068 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane permease ABC transporter protein rsc1975 or rs03549 SWALL:Q8XXY8 (EMBL:AL646067) (274 aa) fasta scores: E(): 2.5e-62, 63.6% id in 272 aa, and to Rhizobium sp. nodulation protein J NodJ SWALL:NODJ_RHIS3 (SWALL:P72336) (262 aa) fasta scores: E(): 3.9e-61, 64.72% id in 258 aa; ABC transporter membrane protein 2199068 3092479 BPSL1845 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_108444.1 2198232 D 272560 CDS YP_108445.1 53719459 3092209 complement(2199174..2199671) 1 NC_006350.1 hypothetical protein 2199671 3092209 BPSL1846 Burkholderia pseudomallei K96243 hypothetical protein YP_108445.1 2199174 R 272560 CDS YP_108446.1 53719460 3092210 complement(2199911..2200972) 1 NC_006350.1 Similar to Escherichia coli hypothetical protein YraQ or b3151 SWALL:YRAQ_ECOLI (SWALL:P45468) (346 aa) fasta scores: E(): 1.7e-59, 52.45% id in 347 aa, and to Methanosarcina mazei conserved protein mm2245 SWALL:AAM31941 (EMBL:AE013466) (299 aa) fasta scores: E(): 1e-10, 27.94% id in 272 aa; hypothetical protein 2200972 3092210 BPSL1847 Burkholderia pseudomallei K96243 hypothetical protein YP_108446.1 2199911 R 272560 CDS YP_108447.1 53719461 3094315 complement(2201328..2202380) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable oxidoreductase pa4434 SWALL:Q9HVY1 (EMBL:AE004857) (345 aa) fasta scores: E(): 2.3e-78, 58% id in 350 aa, and to Escherichia coli Tas protein or b2834 SWALL:TAS_ECOLI (SWALL:Q46933) (346 aa) fasta scores: E(): 4.6e-75, 56.28% id in 350 aa; oxidoreductase 2202380 3094315 BPSL1848 Burkholderia pseudomallei K96243 oxidoreductase YP_108447.1 2201328 R 272560 CDS YP_108448.1 53719462 3094316 complement(2202667..2203113) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc3389 or rs05670 SWALL:Q8XU05 (EMBL:AL646075) (182 aa) fasta scores: E(): 1.9e-22, 63.3% id in 109 aa, and to Deinococcus radiodurans hypothetical protein dra0017 SWALL:Q9RZD5 (EMBL:AE001862) (168 aa) fasta scores: E(): 3.8e-16, 41.25% id in 143 aa; hypothetical protein 2203113 3094316 BPSL1849 Burkholderia pseudomallei K96243 hypothetical protein YP_108448.1 2202667 R 272560 CDS YP_108449.1 53719463 3094338 2203286..2203762 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2713 SWALL:Q9I0C9 (EMBL:AE004699) (159 aa) fasta scores: E(): 1.4e-39, 62.41% id in 149 aa, and to Ralstonia solanacearum hypothetical protein rsp1119 or rs05500 SWALL:Q8XQU9 (EMBL:AL646083) (162 aa) fasta scores: E(): 2.9e-28, 45.62% id in 160 aa; hypothetical protein 2203762 3094338 BPSL1850 Burkholderia pseudomallei K96243 hypothetical protein YP_108449.1 2203286 D 272560 CDS YP_108450.1 53719464 3094339 2204941..2206248 1 NC_006350.1 Similar to Ralstonia solanacearum glutamate symport transmembrane protein rsc1957 or rs03531 SWALL:Q8XY06 (EMBL:AL646067) (428 aa) fasta scores: E(): 7.2e-90, 57.34% id in 429 aa, and to Caulobacter crescentus sodium:dicarboxylate symporter family protein cc0263 SWALL:Q9ABG4 (EMBL:AE005699) (417 aa) fasta scores: E(): 9e-89, 60.04% id in 418 aa, and to Bacillus subtilis C4-dicarboxylate transport protein DctA or DctP SWALL:DCTA_BACSU (SWALL:P96603) (421 aa) fasta scores: E(): 6e-52, 37.01% id in 416 aa; membrane attached sodium:dicarboxylate symporter family protein 2206248 3094339 BPSL1851 Burkholderia pseudomallei K96243 membrane attached sodium:dicarboxylate symporter family protein YP_108450.1 2204941 D 272560 CDS YP_108451.1 53719465 3093392 2206826..2207845 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1299 or rs02821 SWALL:Q8XZU6 (EMBL:AL646063) (344 aa) fasta scores: E(): 3.1e-97, 72.61% id in 336 aa, and to Salmonella typhi hypothetical protein sty4439 SWALL:Q8Z1T1 (EMBL:AL627282) (332 aa) fasta scores: E(): 3.9e-73, 58.56% id in 321 aa; tRNA-dihydrouridine synthase A 2207845 3093392 BPSL1852 Burkholderia pseudomallei K96243 tRNA-dihydrouridine synthase A YP_108451.1 2206826 D 272560 CDS YP_108452.1 53719466 3093393 complement(2208821..2209075) 1 NC_006350.1 hypothetical protein 2209075 3093393 BPSL1853 Burkholderia pseudomallei K96243 hypothetical protein YP_108452.1 2208821 R 272560 CDS YP_108453.1 53719467 3094673 complement(2209149..2209394) 1 NC_006350.1 hypothetical protein 2209394 3094673 BPSL1854 Burkholderia pseudomallei K96243 hypothetical protein YP_108453.1 2209149 R 272560 CDS YP_108454.1 53719468 3092330 complement(2209475..2209690) 1 NC_006350.1 Similar to Clostridium pasteurianum molybdenum-pterin binding protein II MopII SWALL:MOP2_CLOPA (SWALL:P08854) (68 aa) fasta scores: E(): 2.8e-05, 47.82% id in 69 aa, and to Ralstonia solanacearum molybdopterin-binding protein rsc1342 or rs02864 SWALL:Q8XZQ3 (EMBL:AL646064) (71 aa) fasta scores: E(): 6.9e-19, 80.28% id in 71 aa; molybdenum-pterin binding protein II 2209690 mopII 3092330 mopII Burkholderia pseudomallei K96243 molybdenum-pterin binding protein II YP_108454.1 2209475 R 272560 CDS YP_108455.1 53719469 3094098 complement(2209779..2210762) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 aliphatic sulfonates transport ATP-binding protein SsuB or b0933 or z1281 or ecs1016 SWALL:SSUB_ECOLI (SWALL:P38053) (255 aa) fasta scores: E(): 4.6e-42, 62% id in 229 aa, and to Ralstonia solanacearum aliphatic sulfonates ATP-binding ABC transporter protein rsc1341 or rs02863 SWALL:Q8XZQ4 (EMBL:AL646064) (284 aa) fasta scores: E(): 2.8e-48, 58.3% id in 283 aa. Note: this CDS is longer in its N-terminal region than most of its database matches. Possible alternative start codon at residue 55; aliphatic sulfonates transport ATP-binding protein 2210762 ssuB 3094098 ssuB Burkholderia pseudomallei K96243 aliphatic sulfonates transport ATP-binding protein YP_108455.1 2209779 R 272560 CDS YP_108456.1 53719470 3092696 complement(2210759..2211580) 1 NC_006350.1 Similar to Escherichia coli aliphatic sulfonates transport permease SsuC or b0934 SWALL:SSUC_ECOLI (SWALL:P75851) (263 aa) fasta scores: E(): 4.1e-63, 66.66% id in 246 aa, and to Ralstonia solanacearum aliphatic sulfonates transmembrane ABC transporter protein rsc1340 or rs02862 SWALL:Q8XZQ5 (EMBL:AL646064) (264 aa) fasta scores: E(): 5.8e-67, 71.82% id in 252 aa; aliphatic sulfonates transport permease 2211580 ssuC 3092696 ssuC Burkholderia pseudomallei K96243 aliphatic sulfonates transport permease YP_108456.1 2210759 R 272560 CDS YP_108457.1 53719471 3094518 complement(2211598..2212755) 1 NC_006350.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 2212755 ssuD 3094518 ssuD Burkholderia pseudomallei K96243 alkanesulfonate monooxygenase YP_108457.1 2211598 R 272560 CDS YP_108458.1 53719472 3094674 2213101..2213565 1 NC_006350.1 hypothetical protein 2213565 3094674 BPSL1859 Burkholderia pseudomallei K96243 hypothetical protein YP_108458.1 2213101 D 272560 CDS YP_108459.1 53719473 3093980 complement(2214022..2215164) 1 NC_006350.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 2215164 3093980 BPSL1860 Burkholderia pseudomallei K96243 3-hydroxyisobutyryl-CoA hydrolase YP_108459.1 2214022 R 272560 CDS YP_108460.1 53719474 3092043 complement(2215194..2215532) 1 NC_006350.1 Similar to Escherichia coli, Salmonella typhimurium, and Pseudomonas aeruginosa ethidium bromide resistance protein Ebr or E1 SWALL:EBR_ECOLI (SWALL:P14502) (115 aa) fasta scores: E(): 1.7e-16, 53% id in 100 aa, and to the plasmid borne Escherichia coli, and Klebsiella aerogenes quaternary ammonium compound-resistance protein QacE SWALL:QACE_ECOLI (SWALL:Q57225) (110 aa) fasta scores: E(): 1.3e-20, 58.18% id in 110 aa; quaternary ammonium compound-resistance protein 2215532 qacE 3092043 qacE Burkholderia pseudomallei K96243 quaternary ammonium compound-resistance protein YP_108460.1 2215194 R 272560 CDS YP_108461.1 53719475 3093981 complement(2215537..2216034) 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein r02983 or smc03110 SWALL:YT83_RHIME (SWALL:P29953) (164 aa) fasta scores: E(): 3.3e-26, 51.85% id in 162 aa, and to Streptomyces coelicolor hypothetical protein sco2848 or sce20.22 SWALL:Q9RDA3 (EMBL:AL136058) (158 aa) fasta scores: E(): 1.1e-20, 50% id in 142 aa; hypothetical protein 2216034 3093981 BPSL1862 Burkholderia pseudomallei K96243 hypothetical protein YP_108461.1 2215537 R 272560 CDS YP_108462.1 53719476 3091582 2216754..2217299 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1618 or rs03981 SWALL:Q8XYY8 (EMBL:AL646065) (195 aa) fasta scores: E(): 2.6e-54, 71.19% id in 184 aa, and to Pseudomonas aeruginosa hypothetical protein pa3755 SWALL:Q9HXP0 (EMBL:AE004794) (184 aa) fasta scores: E(): 4.4e-46, 65.08% id in 169 aa; hypothetical protein 2217299 3091582 BPSL1863 Burkholderia pseudomallei K96243 hypothetical protein YP_108462.1 2216754 D 272560 CDS YP_108463.1 53719477 3091583 2217308..2218075 1 NC_006350.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2218075 aat 3091583 aat Burkholderia pseudomallei K96243 leucyl/phenylalanyl-tRNA--protein transferase YP_108463.1 2217308 D 272560 CDS YP_108464.1 53719478 3091963 2218109..2218939 1 NC_006350.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2218939 3091963 BPSL1865 Burkholderia pseudomallei K96243 arginyl-tRNA-protein transferase YP_108464.1 2218109 D 272560 CDS YP_108465.1 53719479 3093839 2219044..2220072 1 NC_006350.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2220072 pyrD 3093839 pyrD Burkholderia pseudomallei K96243 dihydroorotate dehydrogenase 2 YP_108465.1 2219044 D 272560 CDS YP_108466.1 53719480 3091964 2220192..2220986 1 NC_006350.1 Similar to Escherichia coli cystine-binding periplasmic protein precursor FliY or b1920 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 5.1e-35, 42.1% id in 266 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa0314 SWALL:Q9I6H7 (EMBL:AE004469) (256 aa) fasta scores: E(): 8.7e-54, 57.97% id in 257 aa, and to; ABC transporter cystine-binding protein 2220986 3091964 BPSL1867 Burkholderia pseudomallei K96243 ABC transporter cystine-binding protein YP_108466.1 2220192 D 272560 CDS YP_108467.1 53719481 3092263 2221116..2221775 1 NC_006350.1 Similar to Brucella suis 1330 amino acid ABC transporter permease bra0683 SWALL:AAN33870 (EMBL:AE014564) (226 aa) fasta scores: E(): 1.1e-34, 51.62% id in 215 aa, and to Caulobacter crescentus cystine ABC tranporter, permease, cc1440 SWALL:Q9A8B4 (EMBL:AE005818) (219 aa) fasta scores: E(): 3.9e-34, 54.46% id in 213 aa; ABC transporter membrane protein 2221775 3092263 BPSL1868 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_108467.1 2221116 D 272560 CDS YP_108468.1 53719482 3092264 complement(2222175..2223158) 1 NC_006350.1 Similar to Bacillus subtilis hypothetical oxidoreductase YulF SWALL:YULF_BACSU (SWALL:O05265) (328 aa) fasta scores: E(): 2.3e-25, 33.84% id in 328 aa, and to Streptomyces coelicolor oxidoreductase sco2285 or scc75a.31 SWALL:Q9RKP3 (EMBL:AL133220) (351 aa) fasta scores: E(): 5.8e-21, 31.49% id in 327 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; oxidoreductase 2223158 3092264 BPSL1869 Burkholderia pseudomallei K96243 oxidoreductase YP_108468.1 2222175 R 272560 CDS YP_108469.1 53719483 3092305 complement(2223258..2223971) 1 NC_006350.1 Similar to Caulobacter crescentus transcriptional regulator, GntR family cc0783 SWALL:Q9AA25 (EMBL:AE005754) (242 aa) fasta scores: E(): 4.1e-18, 36.53% id in 219 aa, and to Streptomyces coelicolor GntR-famly transcriptional regulator sco1177 or scg11a.08 SWALL:Q9RJZ3 (EMBL:AL133210) (246 aa) fasta scores: E(): 3e-16, 34.07% id in 226 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; GntR family transcriptional regulator 2223971 3092305 BPSL1870 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_108469.1 2223258 R 272560 CDS YP_108470.1 53719484 3094103 complement(2224309..2225004) 1 NC_006350.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 2225004 rpiA 3094103 rpiA Burkholderia pseudomallei K96243 ribose-5-phosphate isomerase A YP_108470.1 2224309 R 272560 CDS YP_108471.1 53719485 3092306 complement(2225273..2226172) 1 NC_006350.1 Similar to Escherichia coli probable N-acetylmuramoyl-L-alanine amidase YbjR or b0867 SWALL:YBJR_ECOLI (SWALL:P75820) (276 aa) fasta scores: E(): 4.4e-49, 52.57% id in 272 aa, and to Salmonella typhi N-acetylmuramoyl-L-alanine amidase sty0927 SWALL:Q8Z834 (EMBL:AL627268) (276 aa) fasta scores: E(): 1.6e-45, 49.62% id in 268 aa; N-acetylmuramoyl-L-alanine amidase 2226172 3092306 BPSL1872 Burkholderia pseudomallei K96243 N-acetylmuramoyl-L-alanine amidase YP_108471.1 2225273 R 272560 CDS YP_108472.1 53719486 3091946 complement(2226546..2227289) 1 NC_006350.1 Similar to Ralstonia solanacearum tRNA/rRNA methyltransferase rsc1229 or rs02736 SWALL:Q8Y016 (EMBL:AL646063) (249 aa) fasta scores: E(): 3.6e-64, 74.07% id in 243 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical tRNA/rRNA methyltransferase YjfH or b4180 or z5787 or ecs5156 SWALL:YJFH_ECOLI (SWALL:P39290) (243 aa) fasta scores: E(): 2.8e-41, 52.69% id in 241 aa; tRNA/rRNA methyltransferase 2227289 3091946 BPSL1873 Burkholderia pseudomallei K96243 tRNA/rRNA methyltransferase YP_108472.1 2226546 R 272560 CDS YP_108473.1 53719487 3091947 complement(2227421..2229955) 1 NC_006350.1 Similar to Escherichia coli ribonuclease R Rnr or VacB or b4179 SWALL:RNR_ECOLI (SWALL:P21499) (813 aa) fasta scores: E(): 7.6e-100, 46.25% id in 828 aa, and to Ralstonia solanacearum probable exoribonuclease RNAse R Rnr or rsc1228 or rs02877 SWALL:Q8Y017 (EMBL:AL646063) (871 aa) fasta scores: E(): 1.3e-208, 69.3% id in 808 aa. Note: Possible alternative start codon at residue 16; ribonuclease 2229955 3091947 BPSL1874 Burkholderia pseudomallei K96243 ribonuclease YP_108473.1 2227421 R 272560 CDS YP_108474.1 53719488 3094733 complement(2230595..2232307) 1 NC_006350.1 Similar to Ralstonia solanacearum methyl-accepting chemotaxis transducer transmembrane protein rsp1027 or rs02364 SWALL:Q8XR41 (EMBL:AL646082) (524 aa) fasta scores: E(): 2.6e-50, 41.45% id in 550 aa, and C-terminail region similar to C-terminal region of Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 9.8e-47, 50% id in 338 aa. Note: C-terminal region also smilar to C-terminal region of BPSL1829 (635 aa) fasta scores: E(): 1.7e-48, 49.231% identity in 390 aa overlap; methyl-accepting chemotaxis protein 2232307 3094733 BPSL1875 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_108474.1 2230595 R 272560 CDS YP_108475.1 53719489 3094734 2232808..2234328 1 NC_006350.1 Similar to Arabidopsis thaliana phospholipase t12j13.18 or t21p5.4 SWALL:Q9S816 (EMBL:AC009327) (521 aa) fasta scores: E(): 3.4e-32, 30.87% id in 502 aa, and to Sulfolobus solfataricus acid phosphatase, sso2789 SWALL:Q97V43 (EMBL:AE006873) (511 aa) fasta scores: E(): 5.1e-08, 25.63% id in 476 aa; phospholipase 2234328 3094734 BPSL1876 Burkholderia pseudomallei K96243 phospholipase YP_108475.1 2232808 D 272560 CDS YP_108476.1 53719490 3094689 2234635..2236161 1 NC_006350.1 Similar to Rhizobium etli hypothetical protein yh037 SWALL:AAM54971 (EMBL:U80928) (540 aa) fasta scores: E(): 4.9e-19, 30.4% id in 500 aa; hypothetical protein 2236161 3094689 BPSL1877 Burkholderia pseudomallei K96243 hypothetical protein YP_108476.1 2234635 D 272560 CDS YP_108477.1 53719491 3094690 complement(2236553..2238265) 1 NC_006350.1 Similar to Ralstonia solanacearum sulfate transporter transmembrane protein rsp1519 or rs04796 SWALL:Q8XPW7 (EMBL:AL646085) (567 aa) fasta scores: E(): 5e-146, 73.22% id in 564 aa, and to Corynebacterium glutamicum sulfate permease and related transporters cgl1051 SWALL:BAB98444 (EMBL:AP005277) (579 aa) fasta scores: E(): 1.4e-38, 28.59% id in 514 aa; sulfate transporter membrane protein 2238265 3094690 BPSL1878 Burkholderia pseudomallei K96243 sulfate transporter membrane protein YP_108477.1 2236553 R 272560 CDS YP_108478.1 53719492 3094705 complement(2238312..2238938) 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein mlr0735 SWALL:Q98M47 (EMBL:AP002995) (207 aa) fasta scores: E(): 1.3e-36, 50.77% id in 193 aa, and to Ralstonia solanacearum hypothetical protein rsc0706 or rs05147 SWALL:Q8Y1I4 (EMBL:AL646060) (218 aa) fasta scores: E(): 1.4e-33, 47.64% id in 191 aa; hypothetical protein 2238938 3094705 BPSL1879 Burkholderia pseudomallei K96243 hypothetical protein YP_108478.1 2238312 R 272560 CDS YP_108479.1 53719493 3094706 complement(2239082..2239606) 1 NC_006350.1 Similar to Caulobacter crescentus acetyltransferase, GNAT family cc0213 SWALL:Q9ABL4 (EMBL:AE005695) (182 aa) fasta scores: E(): 1e-12, 37.74% id in 151 aa, and to Bacillus subtilis hypothetical protein YkkB SWALL:YKKB_BACSU (SWALL:P49855) (172 aa) fasta scores: E(): 4.1e-08, 33.33% id in 150 aa; acetyltransferase 2239606 3094706 BPSL1880 Burkholderia pseudomallei K96243 acetyltransferase YP_108479.1 2239082 R 272560 CDS YP_108480.1 53719494 3094066 2240052..2241272 1 NC_006350.1 Similar to Salmonella typhi metabolite transport protein sty0387 SWALL:Q8Z914 (EMBL:AL627266) (417 aa) fasta scores: E(): 7.5e-95, 58.35% id in 401 aa, and to Escherichia coli hypothetical metabolite transport protein YjhB or b4279 SWALL:YJHB_ECOLI (SWALL:P39352) (405 aa) fasta scores: E(): 5.1e-29, 27.91% id in 394 aa; metabolite transport, membrane protein 2241272 3094066 BPSL1881 Burkholderia pseudomallei K96243 metabolite transport, membrane protein YP_108480.1 2240052 D 272560 CDS YP_108481.1 53719495 3094067 2241489..2242445 1 NC_006350.1 Similar to Ralstonia solanacearum transcription regulator protein rsc0538 or rs04928 SWALL:Q8Y1Z9 (EMBL:AL646059) (340 aa) fasta scores: E(): 2.4e-36, 48.06% id in 310 aa, and to the N-terminal region of Xanthomonas campestris transcriptional regulator TetR family PsrA or xcc1980 SWALL:AAM41269 (EMBL:AE012302) (210 aa) fasta scores: E(): 5.7e-15, 45.5% id in 167 aa; TetR family regulatory protein 2242445 3094067 BPSL1882 Burkholderia pseudomallei K96243 TetR family regulatory protein YP_108481.1 2241489 D 272560 CDS YP_108482.1 53719496 3094522 2242630..2244402 1 NC_006350.1 Similar to Escherichia coli long-chain-fatty-acid--CoA ligase FadD or OldD or b1805 SWALL:LCFA_ECOLI (SWALL:P29212) (561 aa) fasta scores: E(): 1e-118, 55.59% id in 563 aa, and to Yersinia pestis KIM acyl-CoA synthetase FadD SWALL:AAM85796 (EMBL:AE013826) (579 aa) fasta scores: E(): 4.9e-120, 57.7% id in 558 aa; acyl-CoA synthetase 2244402 3094522 BPSL1883 Burkholderia pseudomallei K96243 acyl-CoA synthetase YP_108482.1 2242630 D 272560 CDS YP_108483.1 53719497 3094523 2244462..2245421 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc0534 or rs04934 SWALL:Q8Y203 (EMBL:AL646059) (298 aa) fasta scores: E(): 1.2e-37, 39.31% id in 290 aa; hypothetical protein 2245421 3094523 BPSL1884 Burkholderia pseudomallei K96243 hypothetical protein YP_108483.1 2244462 D 272560 CDS YP_108484.1 53719498 3091754 complement(2245609..2245881) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsp0708 or rs01741 SWALL:Q8XRX3 (EMBL:AL646080) (106 aa) fasta scores: E(): 0.00013, 41.12% id in 107 aa; hypothetical protein 2245881 3091754 BPSL1885 Burkholderia pseudomallei K96243 hypothetical protein YP_108484.1 2245609 R 272560 CDS YP_108485.1 53719499 3091755 2246186..2246836 1 NC_006350.1 N-terminal region is similar to Escherichia coli, and Escherichia coli O157:H7 Hfq protein or b4172 or z5779 or ecs5148 SWALL:HFQ_ECOLI (SWALL:P25521) (101 aa) fasta scores: E(): 1.5e-07, 50.66% id in 75 aa, and to Pseudomonas syringae Hfq protein PSPTO4942 SWALL:HFQ_PSESM (SWALL:Q87VJ4) (86 aa) fasta scores: E(): 0.0038, 46.98% id in 83 aa. CDS lacks an appropriate stop codon and is extended at the the C-terminus in comparison to orthologues. C-terminal region of the CDS contains a repeat region. Possible pseudogene, the effect the sequence extension on the function of the protein is not known; Hfq protein 2246836 3091755 BPSL1885A Burkholderia pseudomallei K96243 Hfq protein YP_108485.1 2246186 D 272560 CDS YP_108486.1 53719500 3091423 complement(2246987..2247718) 1 NC_006350.1 Similar to Ralstonia solanacearum lipoprotein rsp1078 or rs02585 SWALL:Q8XQZ0 (EMBL:AL646082) (248 aa) fasta scores: E(): 4.3e-20, 42.62% id in 251 aa; hypothetical protein 2247718 3091423 BPSL1886 Burkholderia pseudomallei K96243 hypothetical protein YP_108486.1 2246987 R 272560 CDS YP_108487.1 53719501 3091424 complement(2247791..2249182) 1 NC_006350.1 Similar to Ralstonia solanacearum probable sigma-54 interacting transcription regulator protein rsp1079 or rs02586 SWALL:Q8XQY9 (EMBL:AL646082) (467 aa) fasta scores: E(): 2.4e-101, 58.35% id in 461 aa, and C-terminal region to the C-terminal region of Pseudomonas aeruginosa type 4 fimbriae expression regulatory protein PilR or pa4547 SWALL:PILR_PSEAE (SWALL:Q00934) (445 aa) fasta scores: E(): 2e-36, 40.05% id in 352 aa; sigma-54 related transcriptional regulatory protein 2249182 3091424 BPSL1887 Burkholderia pseudomallei K96243 sigma-54 related transcriptional regulatory protein YP_108487.1 2247791 R 272560 CDS YP_108488.1 53719502 3093705 complement(2249199..2250905) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp1080 or rs02587 SWALL:Q8XQY8 (EMBL:AL646082) (541 aa) fasta scores: E(): 1e-35, 34.76% id in 584 aa, and to Agrobacterium tumefaciens hypothetical protein atu1609 or agr_c_2962 SWALL:Q8UEZ4 (EMBL:AE009118) (579 aa) fasta scores: E(): 3.8e-06, 25.71% id in 599 aa; hypothetical protein 2250905 3093705 BPSL1888 Burkholderia pseudomallei K96243 hypothetical protein YP_108488.1 2249199 R 272560 CDS YP_108489.1 53719503 3093706 complement(2251015..2251410) 1 NC_006350.1 lipoprotein 2251410 3093706 BPSL1889 Burkholderia pseudomallei K96243 lipoprotein YP_108489.1 2251015 R 272560 CDS YP_108490.1 53719504 3091584 complement(2251432..2252397) 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsp1082 or rs02589 SWALL:Q8XQY6 (EMBL:AL646082) (305 aa) fasta scores: E(): 1.6e-10, 44.28% id in 271 aa, and to Pseudomonas aeruginosa hypothetical protein pa4299 SWALL:Q9HWA1 (EMBL:AE004846) (245 aa) fasta scores: E(): 3.5e-05, 33.33% id in 222 aa; lipoprotein 2252397 3091584 BPSL1890 Burkholderia pseudomallei K96243 lipoprotein YP_108490.1 2251432 R 272560 CDS YP_108491.1 53719505 3091585 complement(2252404..2253429) 1 NC_006350.1 Similar to Ralstonia solanacearum tight adherence TadC related transmembrane protein rsp1083 or rs02590 SWALL:Q8XQY5 (EMBL:AL646082) (326 aa) fasta scores: E(): 1.2e-44, 47.18% id in 337 aa, and to Rhizobium meliloti hypothetical transmembrane protein r00146 or smc02822 SWALL:Q92T37 (EMBL:AL591782) (327 aa) fasta scores: E(): 1e-06, 24.52% id in 318 aa; outer-membrane protein 2253429 3091585 BPSL1891 Burkholderia pseudomallei K96243 outer-membrane protein YP_108491.1 2252404 R 272560 CDS YP_108492.1 53719506 3091432 complement(2253426..2254433) 1 NC_006350.1 Similar to Ralstonia solanacearum probable pilus assembly transmembrane protein rsp1084 or rs02591 SWALL:Q8XQY4 (EMBL:AL646082) (308 aa) fasta scores: E(): 1.5e-31, 38.62% id in 334 aa, and to Chlorobium tepidum TadD protein or ct0435 SWALL:AAM71681 (EMBL:AE012821) (305 aa) fasta scores: E(): 2.3e-09, 25.48% id in 259 aa; fimbriae-related outer membrane protein 2254433 3091432 BPSL1892 Burkholderia pseudomallei K96243 fimbriae-related outer membrane protein YP_108492.1 2253426 R 272560 CDS YP_108493.1 53719507 3091433 complement(2254426..2255769) 1 NC_006350.1 Similar to Ralstonia solanacearum probable secretion ATPase CpaF2 or rsp1085 or rs02592 SWALL:Q8XQY3 (EMBL:AL646082) (450 aa) fasta scores: E(): 7.2e-134, 78.54% id in 452 aa, and to Agrobacterium tumefaciens component of type IV pilus CtpG or atu0218 or agr_c_373 SWALL:Q8UIS4 (EMBL:AE008995) (491 aa) fasta scores: E(): 6.2e-62, 42.48% id in 426 aa; type II/IV secretion system ATP-binding protein 2255769 3091433 BPSL1893 Burkholderia pseudomallei K96243 type II/IV secretion system ATP-binding protein YP_108493.1 2254426 R 272560 CDS YP_108494.1 53719508 3093182 complement(2255773..2257011) 1 NC_006350.1 Similar to the plasmid borne Ralstonia solanacearum probable pilus assembly protein rsp1086 or rs02593 SWALL:Q8XQY2 (EMBL:AL646082) (439 aa) fasta scores: E(): 8.5e-50, 43% id in 400 aa, and to Caulobacter crescentus pilus assembly protein cc2943 SWALL:Q9A495 (EMBL:AE005958) (517 aa) fasta scores: E(): 5e-10, 24.4% id in 377 aa; fimbriae assembly protein 2257011 3093182 BPSL1894 Burkholderia pseudomallei K96243 fimbriae assembly protein YP_108494.1 2255773 R 272560 CDS YP_108495.1 53719509 3093183 complement(2257078..2258403) 1 NC_006350.1 Similar to Ralstonia solanacearum probable outer membrane channel signal peptide protein rsp1087 or rs02594 SWALL:Q8XQY1 (EMBL:AL646082) (454 aa) fasta scores: E(): 1.6e-75, 52.21% id in 452 aa, and to Rhizobium loti pilus assembly protein mll6479 SWALL:Q989D0 (EMBL:AP003009) (481 aa) fasta scores: E(): 1.7e-27, 32.5% id in 400 aa; exported fimbriae assembly protein 2258403 3093183 BPSL1895 Burkholderia pseudomallei K96243 exported fimbriae assembly protein YP_108495.1 2257078 R 272560 CDS YP_108496.1 53719510 3094657 complement(2258467..2259366) 1 NC_006350.1 Similar to the palsmid borne Ralstonia solanacearum probable signal peptide protein rsp1089 or rs02596 SWALL:Q8XQX9 (EMBL:AL646082) (208 aa) fasta scores: E(): 2.2e-15, 40.9% id in 198 aa, and to Rhizobium meliloti probable CpaB2 pilus assembly protein or ra0856 or sma1576 SWALL:Q92YL7 (EMBL:AE007272) (263 aa) fasta scores: E(): 2e-05, 29.83% id in 238 aa; membrane fimbriae assembly protein 2259366 3094657 BPSL1896 Burkholderia pseudomallei K96243 membrane fimbriae assembly protein YP_108496.1 2258467 R 272560 CDS YP_108497.1 53719511 3094658 complement(2259446..2259913) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1090 or rs02595 SWALL:Q8XQX8 (EMBL:AL646082) (163 aa) fasta scores: E(): 1.9e-14, 43.5% id in 154 aa, and to Pseudomonas aeruginosa hypothetical protein pa4294 SWALL:Q9HWA6 (EMBL:AE004845) (168 aa) fasta scores: E(): 2.6e-05, 33.11% id in 151 aa; hypothetical protein 2259913 3094658 BPSL1897 Burkholderia pseudomallei K96243 hypothetical protein YP_108497.1 2259446 R 272560 CDS YP_108498.1 53719512 3093974 complement(2259910..2260410) 1 NC_006350.1 Similar to the plasmid borne Ralstonia solanacearum probable prepilin peptidase transmembrane protein CpaA2 or rsp1091 or rs02612 SWALL:Q8XQX7 (EMBL:AL646082) (168 aa) fasta scores: E(): 8.9e-11, 38.88% id in 162 aa, and to the C-terminal region of Escherichia coli type 4 prepilin-like proteins leader peptide processing enzyme [includes: leader peptidase (prepilin peptidase); n- methyltransferase HofD or HopD or HopO or b3335 SWALL:LEP4_ECOLI (SWALL:P25960) (225 aa) fasta scores: E(): 0.0086, 25.67% id in 148 aa; hypothetical protein 2260410 3093974 BPSL1898 Burkholderia pseudomallei K96243 hypothetical protein YP_108498.1 2259910 R 272560 CDS YP_108499.1 53719513 3093975 complement(2260493..2260663) 1 NC_006350.1 Similar to Rhizobium meliloti probable pilus assembly protein PilA2 or ra0853 or sma1570 SWALL:Q92YM0 (EMBL:AE007272) (56 aa) fasta scores: E(): 2.4e-07, 54.71% id in 53 aa, and to Caulobacter crescentus PilA or cc2948 SWALL:Q9L720 (EMBL:AF229646) (59 aa) fasta scores: E(): 1.2e-05, 48.21% id in 56 aa; fimbriae assembly-like protein 2260663 3093975 BPSL1899 Burkholderia pseudomallei K96243 fimbriae assembly-like protein YP_108499.1 2260493 R 272560 CDS YP_108501.1 53719515 3093983 2261328..2262917 1 NC_006350.1 Similar to Ralstonia solanacearum hemagglutinin-related transmembrane protein rsp1094 or rs02600 SWALL:Q8XQX4 (EMBL:AL646082) (459 aa) fasta scores: E(): 9.5e-39, 45.26% id in 517 aa. Note: Contains a high glycine and serine amino acid residues content region in the N-terminal region and 3x repeat in the C-terminal region (VSTVTGALSGATGG). Also similar to BPSS1974 (573 aa) fasta scores: E(): 3.2e-43, 48.289% identity in 526 aa overlap; hypothetical protein 2262917 3093983 BPSL1901 Burkholderia pseudomallei K96243 hypothetical protein YP_108501.1 2261328 D 272560 CDS YP_108502.1 53719516 3094579 2262967..2264232 1 NC_006350.1 Similar to Ralstonia solanacearum hemagglutinin-related transmembrane protein rsp1094 or rs02600 SWALL:Q8XQX4 (EMBL:AL646082) (459 aa) fasta scores: E(): 6.2e-32, 43.89% id in 426 aa. Note: Also similar to BPSL1901 (558 aa) fasta scores: E(): 1.6e-34, 45.366% identity in 410 aa overlap; hypothetical protein 2264232 3094579 BPSL1902 Burkholderia pseudomallei K96243 hypothetical protein YP_108502.1 2262967 D 272560 CDS YP_108503.1 53719517 3094580 2264383..2266062 1 NC_006350.1 Similar to Ralstonia solanacearum probable activation/secretion signal peptide protein rsp1095 or rs02601 SWALL:Q8XQX3 (EMBL:AL646082) (557 aa) fasta scores: E(): 1.8e-89, 45.21% id in 564 aa, and to Haemophilus influenzae heme/hemopexin utilization protein B precursor HxuB SWALL:HXB2_HAEIN (SWALL:P45356) (565 aa) fasta scores: E(): 7.5e-11, 20.52% id in 531 aa; exported heme utilisation-like protein 2266062 3094580 BPSL1903 Burkholderia pseudomallei K96243 exported heme utilisation-like protein YP_108503.1 2264383 D 272560 CDS YP_108504.1 53719518 3093668 2266285..2266767 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc2798 or rs05621 SWALL:Q8XVN2 (EMBL:AL646071) (152 aa) fasta scores: E(): 3.8e-26, 58.04% id in 143 aa, and to Xanthomonas campestris hypothetical protein xcc1341 SWALL:AAM40639 (EMBL:AE012233) (159 aa) fasta scores: E(): 1.5e-24, 50.99% id in 151 aa; hypothetical protein 2266767 3093668 BPSL1904 Burkholderia pseudomallei K96243 hypothetical protein YP_108504.1 2266285 D 272560 CDS YP_108505.1 53719519 3093669 complement(2267004..2267414) 1 NC_006350.1 Similar to Rhizobium loti transposase mlr9643 SWALL:Q98P22 (EMBL:AP003017) (127 aa) fasta scores: E(): 1.8e-11, 34.82% id in 112 aa, and to Agrobacterium tumefaciens hypothetical 15.7 kDa protein SWALL:Q44424 (EMBL:M55562) (137 aa) fasta scores: E(): 2e-11, 35.71% id in 112 aa; transposase 2267414 3093669 BPSL1905 Burkholderia pseudomallei K96243 transposase YP_108505.1 2267004 R 272560 CDS YP_108506.1 53719520 3093678 complement(2267610..2268707) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1272 or rs02810 SWALL:Q8XZX3 (EMBL:AL646063) (365 aa) fasta scores: E(): 1.1e-121, 80% id in 365 aa, and to Neisseria meningitidis nucleotide-binding protein nma1520 or nmb1306 SWALL:Q9JRK2 (EMBL:AL162756) (383 aa) fasta scores: E(): 1.7e-64, 47.72% id in 352 aa; hypothetical protein 2268707 3093678 BPSL1906 Burkholderia pseudomallei K96243 hypothetical protein YP_108506.1 2267610 R 272560 CDS YP_108507.1 53719521 3094406 complement(2268814..2270244) 1 NC_006350.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 2270244 odhL 3094406 odhL Burkholderia pseudomallei K96243 dihydrolipoamide dehydrogenase YP_108507.1 2268814 R 272560 CDS YP_108508.1 53719522 3093009 complement(2270344..2271621) 1 NC_006350.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 2271621 sucB 3093009 sucB Burkholderia pseudomallei K96243 dihydrolipoamide succinyltransferase YP_108508.1 2270344 R 272560 CDS YP_108509.1 53719523 3094519 complement(2271756..2274620) 1 NC_006350.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 2274620 sucA 3094519 sucA Burkholderia pseudomallei K96243 2-oxoglutarate dehydrogenase E1 YP_108509.1 2271756 R 272560 CDS YP_108510.1 53719524 3093679 2274974..2276437 1 NC_006350.1 Similar to Thermoanaerobacter tengcongensis transposase TTE0846 SWALL:Q8RBH2 (EMBL:AE013051) (492 aa) fasta scores: E(): 4.3e-74, 43.54% id in 457 aa, and to Pseudomonas sp. transposase TnpA SWALL:Q936Y1 (EMBL:U66917) (456 aa) fasta scores: E(): 1.5e-32, 30.88% id in 476 aa; transposase 2276437 3093679 BPSL1910 Burkholderia pseudomallei K96243 transposase YP_108510.1 2274974 D 272560 CDS YP_108511.1 53719525 3091717 complement(2276550..2278376) 1 NC_006350.1 Similar to Escherichia coli GTP-binding protein TypA or BipA or b3871 SWALL:TYPA_ECOLI (SWALL:P32132) (591 aa) fasta scores: E(): 3.3e-139, 65.7% id in 592 aa, and to Ralstonia solanacearum probable GTP-binding elongation factor protein rsc1296 or rs02818 SWALL:Q8XZU9 (EMBL:AL646063) (606 aa) fasta scores: E(): 3.2e-185, 84.71% id in 602 aa; GTP-binding protein 2278376 typA 3091717 typA Burkholderia pseudomallei K96243 GTP-binding protein YP_108511.1 2276550 R 272560 CDS YP_108512.1 53719526 3092472 2278669..2279166 1 NC_006350.1 Similar to Ralstonia solanacearum transcription regulator protein rsc1295 or rs02817 SWALL:Q8XZV0 (EMBL:AL646063) (147 aa) fasta scores: E(): 8.6e-20, 48.5% id in 134 aa, and to Burkholderia pseudomallei hypothetical 18.0 kDa protein SWALL:Q9ZF73 (EMBL:AF110185) (163 aa) fasta scores: E(): 4.1e-13, 34.02% id in 144 aa; transcriptional regulatory protein 2279166 3092472 BPSL1912 Burkholderia pseudomallei K96243 transcriptional regulatory protein YP_108512.1 2278669 D 272560 CDS YP_108513.1 53719527 3092473 2279266..2280762 1 NC_006350.1 Similar to Ralstonia solanacearum outer membrane chanel lipoprotein rsc1294 or rs02807 SWALL:Q8XZV1 (EMBL:AL646063) (489 aa) fasta scores: E(): 1.9e-77, 48.72% id in 470 aa, and to Xanthomonas axonopodis outer membrane efflux protein YjcP or xac1444 SWALL:AAM36315 (EMBL:AE011776) (496 aa) fasta scores: E(): 6.1e-56, 38.46% id in 481 aa; hypothetical protein 2280762 3092473 BPSL1913 Burkholderia pseudomallei K96243 hypothetical protein YP_108513.1 2279266 D 272560 CDS YP_108514.1 53719528 3093432 2280830..2282065 1 NC_006350.1 Similar to Escherichia coli multidrug resistance protein A EmrA or b2685 SWALL:EMRA_ECOLI (SWALL:P27303) (390 aa) fasta scores: E(): 1e-62, 49.74% id in 390 aa, and to Ralstonia solanacearum probable multidrug resistance A EmrA or rsc1293 or rs02806 SWALL:Q8XZV2 (EMBL:AL646063) (428 aa) fasta scores: E(): 1.2e-87, 63.48% id in 408 aa; multidrug resistance protein A 2282065 emrA 3093432 emrA Burkholderia pseudomallei K96243 multidrug resistance protein A YP_108514.1 2280830 D 272560 CDS YP_108515.1 53719529 3093265 2282088..2283647 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 multidrug resistance protein B EmrB or b2686 or z3987 or ecs3548 SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 7.5e-110, 54.54% id in 506 aa, and to Ralstonia solanacearum probable multidrug resistance B EmrB or rsc1292 or rs02805 SWALL:Q8XZV3 (EMBL:AL646063) (518 aa) fasta scores: E(): 6.8e-144, 67.95% id in 518 aa; multidrug resistance protein B 2283647 emrB 3093265 emrB Burkholderia pseudomallei K96243 multidrug resistance protein B YP_108515.1 2282088 D 272560 CDS YP_108516.1 53719530 3092486 complement(2283918..2284853) 1 NC_006350.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 2284853 truB 3092486 truB Burkholderia pseudomallei K96243 tRNA pseudouridine synthase B YP_108516.1 2283918 R 272560 CDS YP_108517.1 53719531 3093801 complement(2284880..2285248) 1 NC_006350.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 2285248 rbfA 3093801 rbfA Burkholderia pseudomallei K96243 ribosome-binding factor A YP_108517.1 2284880 R 272560 CDS YP_108518.1 53719532 3093280 complement(2285354..2288281) 1 NC_006350.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 2288281 infB 3093280 infB Burkholderia pseudomallei K96243 translation initiation factor IF-2 YP_108518.1 2285354 R 272560 CDS YP_108519.1 53719533 3093347 complement(2288373..2289848) 1 NC_006350.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2289848 nusA 3093347 nusA Burkholderia pseudomallei K96243 transcription elongation factor NusA YP_108519.1 2288373 R 272560 CDS YP_108520.1 53719534 3093802 complement(2289845..2290306) 1 NC_006350.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 2290306 3093802 BPSL1920 Burkholderia pseudomallei K96243 hypothetical protein YP_108520.1 2289845 R 272560 CDS YP_108521.1 53719535 3092190 complement(2290611..2292275) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1286 rsc1286 or rs02799 SWALL:Q8XZV9 (EMBL:AL646063) (598 aa) fasta scores: E(): 5.5e-61, 52.25% id in 576 aa, and central to C-terminal parts to the rest of the database matches, e.g. Escherichia coli O157:H7 orf, hypothetical protein YciL or z2541 or ecs1841 SWALL:Q8X4Q8 (EMBL:AE005380) (290 aa) fasta scores: E(): 4.8e-34, 57.2% id in 250 aa; hypothetical protein 2292275 3092190 BPSL1921 Burkholderia pseudomallei K96243 hypothetical protein YP_108521.1 2290611 R 272560 CDS YP_108522.1 53719536 3092191 complement(2292339..2293706) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1285 or rs02798 SWALL:Q8XZW0 (EMBL:AL646063) (304 aa) fasta scores: E(): 5.4e-48, 58.73% id in 315 aa, and to Xanthomonas axonopodis hypothetical protein xac2317 SWALL:Q8PK59 (EMBL:AE011869) (412 aa) fasta scores: E(): 2.4e-25, 36.71% id in 444 aa. Note: From approximately residue 180 this CDS does not present any significant database matches appart from the two described above; hypothetical protein 2293706 3092191 BPSL1922 Burkholderia pseudomallei K96243 hypothetical protein YP_108522.1 2292339 R 272560 CDS YP_108523.1 53719537 3091898 complement(2294125..2295027) 1 NC_006350.1 Similar to Bacillus subtilis transcriptional regulatory protein GltC SWALL:GLTC_BACSU (SWALL:P20668) (300 aa) fasta scores: E(): 4.3e-19, 28.76% id in 299 aa, and to Ralstonia solanacearum probable transcription regulator transcription regulator protein rsc2537 or rs00708 SWALL:Q8XWD7 (EMBL:AL646070) (297 aa) fasta scores: E(): 8.5e-64, 59.45% id in 296 aa; transcriptional regulator 2295027 3091898 BPSL1923 Burkholderia pseudomallei K96243 transcriptional regulator YP_108523.1 2294125 R 272560 CDS YP_108524.1 53719538 3091899 2295449..2295847 1 NC_006350.1 Possible gene remnant. No significant database matches to the full length CDS. N-terminus is similar to the N-terminal regions of Shigella flexneri IS1650 protein orfA S0204 SWALL:Q9AFP3 (EMBL:AF348706) (149 aa) fasta scores: E(): 3.7e-07, 38.27% id in 81 aa, and Pantoea agglomerans transposase A SWALL:Q9AM92 (EMBL:AF327444) (149 aa) fasta scores: E(): 1e-06, 38.27% id in 81 aa; hypothetical protein 2295847 3091899 BPSL1924 Burkholderia pseudomallei K96243 hypothetical protein YP_108524.1 2295449 D 272560 CDS YP_108525.1 53719539 3093711 2296086..2296310 1 NC_006350.1 hypothetical protein 2296310 3093711 BPSL1925 Burkholderia pseudomallei K96243 hypothetical protein YP_108525.1 2296086 D 272560 CDS YP_108526.1 53719540 3093712 complement(2296471..2296788) 1 NC_006350.1 hypothetical protein 2296788 3093712 BPSL1926 Burkholderia pseudomallei K96243 hypothetical protein YP_108526.1 2296471 R 272560 CDS YP_108527.1 53719541 3091702 2296989..2297711 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc0146 or rs01016 SWALL:Q8Y335 (EMBL:AL646057) (251 aa) fasta scores: E(): 1e-22, 37.71% id in 236 aa, and to Xanthomonas axonopodis hypothetical protein xac1712 SWALL:AAM36579 (EMBL:AE011803) (253 aa) fasta scores: E(): 1.5e-20, 37.13% id in 237 aa; hypothetical protein 2297711 3091702 BPSL1927 Burkholderia pseudomallei K96243 hypothetical protein YP_108527.1 2296989 D 272560 CDS YP_108528.1 53719542 3091703 2297950..2298228 1 NC_006350.1 Very low similarities to database matches. Similar to Ralstonia solanacearum probable signal peptide protein rsc2280 or rs01277 SWALL:Q8XX38 (EMBL:AL646069) (91 aa) fasta scores: E(): 2.1, 40.44% id in 89 aa; hypothetical protein 2298228 3091703 BPSL1929 Burkholderia pseudomallei K96243 hypothetical protein YP_108528.1 2297950 D 272560 CDS YP_108529.1 53719543 3094794 2298377..2298634 1 NC_006350.1 hypothetical protein 2298634 3094794 BPSL1930 Burkholderia pseudomallei K96243 hypothetical protein YP_108529.1 2298377 D 272560 CDS YP_108530.1 53719544 3094795 complement(2298684..2298974) 1 NC_006350.1 Similar to Neisseria meningitidis hypothetical protein nmb1575 SWALL:Q9JYI1 (EMBL:AE002508) (97 aa) fasta scores: E(): 5.4e-11, 38.54% id in 96 aa, and to Yersinia pestis hypothetical protein ypo1588 SWALL:Q8ZFU3 (EMBL:AJ414149) (95 aa) fasta scores: E(): 5e-09, 38.29% id in 94 aa; hypothetical protein 2298974 3094795 BPSL1931 Burkholderia pseudomallei K96243 hypothetical protein YP_108530.1 2298684 R 272560 CDS YP_108531.1 53719545 3092421 2299152..2300372 1 NC_006350.1 Similar to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 3.6e-138, 78.32% id in 406 aa, and to Burkholderia mallei transposase Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 3.8e-162, 99.22% id in 386 aa. CDS is extended at the N-terminus in comparison to B. mallei protein; transposase 2300372 tnpA 3092421 tnpA Burkholderia pseudomallei K96243 transposase YP_108531.1 2299152 D 272560 CDS YP_108532.1 53719546 3091550 complement(2300849..2302075) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1146 or rs04607 SWALL:Q8Y098 (EMBL:AL646062) (398 aa) fasta scores: E(): 1e-27, 38.98% id in 395 aa, and to Neisseria meningitidis hypothetical protein nmb0928 SWALL:Q9JZR5 (EMBL:AE002444) (398 aa) fasta scores: E(): 9.5e-23, 30.93% id in 417 aa; hypothetical protein 2302075 3091550 BPSL1933 Burkholderia pseudomallei K96243 hypothetical protein YP_108532.1 2300849 R 272560 CDS YP_108533.1 53719547 3091551 2302404..2302895 1 NC_006350.1 hypothetical protein 2302895 3091551 BPSL1934 Burkholderia pseudomallei K96243 hypothetical protein YP_108533.1 2302404 D 272560 CDS YP_108534.1 53719548 3091645 2303059..2304126 1 NC_006350.1 hypothetical protein 2304126 3091645 BPSL1935 Burkholderia pseudomallei K96243 hypothetical protein YP_108534.1 2303059 D 272560 CDS YP_108535.1 53719549 3091646 2304829..2306013 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5458 SWALL:Q9HTB2 (EMBL:AE004958) (380 aa) fasta scores: E(): 7e-50, 43.84% id in 390 aa, and to Rhizobium loti probable lipopolysaccharide modification acyltransferase mlr0739 SWALL:Q98M44 (EMBL:AP002995) (375 aa) fasta scores: E(): 3.7e-48, 39.84% id in 374 aa; hypothetical protein 2306013 3091646 BPSL1936 Burkholderia pseudomallei K96243 hypothetical protein YP_108535.1 2304829 D 272560 CDS YP_108536.1 53719550 3091894 2306519..2308639 1 NC_006350.1 Low similarities to database matches. C-terminal region similar to Pseudomonas aeruginosa hypothetical protein pa0349 SWALL:Q9I6E4 (EMBL:AE004472) (346 aa) fasta scores: E(): 4.1e-30, 33.97% id in 362 aa, and N-terminal region to Pseudomonas aeruginosa hypothetical protein pa0348 SWALL:Q9I6E5 (EMBL:AE004472) (364 aa) fasta scores: E(): 1.1e-22, 28.77% id in 344 aa; hypothetical protein 2308639 3091894 BPSL1937 Burkholderia pseudomallei K96243 hypothetical protein YP_108536.1 2306519 D 272560 CDS YP_108537.1 53719551 3091895 complement(2308761..2309165) 1 NC_006350.1 Similar to Ralstonia solanacearum transcription regulator protein rsc1584 or rs03946 SWALL:Q8XZ22 (EMBL:AL646065) (146 aa) fasta scores: E(): 1e-31, 68.84% id in 138 aa, and to Xanthomonas axonopodis hypothetical protein xac2587 SWALL:AAM37436 (EMBL:AE011899) (118 aa) fasta scores: E(): 2.3e-23, 63.71% id in 113 aa; transcriptional regulator 2309165 3091895 BPSL1938 Burkholderia pseudomallei K96243 transcriptional regulator YP_108537.1 2308761 R 272560 CDS YP_108538.1 53719552 3092200 complement(2309224..2309571) 1 NC_006350.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2309571 ihfA 3092200 ihfA Burkholderia pseudomallei K96243 integration host factor subunit alpha YP_108538.1 2309224 R 272560 CDS YP_108539.1 53719553 3091565 complement(2309701..2312133) 1 NC_006350.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2312133 pheT 3091565 pheT Burkholderia pseudomallei K96243 phenylalanyl-tRNA synthetase subunit beta YP_108539.1 2309701 R 272560 CDS YP_108540.2 161723202 3092764 complement(2312221..2313243) 1 NC_006350.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2313243 pheS 3092764 pheS Burkholderia pseudomallei K96243 phenylalanyl-tRNA synthetase subunit alpha YP_108540.2 2312221 R 272560 CDS YP_108541.1 53719555 3093771 complement(2313383..2313742) 1 NC_006350.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2313742 rplT 3093771 rplT Burkholderia pseudomallei K96243 50S ribosomal protein L20 YP_108541.1 2313383 R 272560 CDS YP_108542.1 53719556 3092639 complement(2313773..2313970) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi 50S ribosomal protein L35 RpmI or b1717 or z2746 or ecs2424 or stm1335 or sty1776 SWALL:RL35_ECOLI (SWALL:P07085) (64 aa) fasta scores: E(): 1.1e-07, 53.12% id in 64 aa, and to Ralstonia solanacearum 50S ribosomal protein L35 rsc1579 or rs03941 SWALL:RL35_RALSO (SWALL:Q8XZ27) (65 aa) fasta scores: E(): 9.7e-21, 78.46% id in 65 aa; 50S ribosomal protein L35 2313970 rpmI 3092639 rpmI Burkholderia pseudomallei K96243 50S ribosomal protein L35 YP_108542.1 2313773 R 272560 CDS YP_108543.1 53719557 3091790 complement(2314163..>2314699) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 translation initiation factor IF-3 InfC or Fit or b1718 or z2747 or ecs2425 SWALL:IF3_ECOLI (SWALL:P02999) (180 aa) fasta scores: E(): 5.5e-41, 69.64% id in 168 aa, and to Ralstonia solanacearum translation initiation factor IF-3 InfC or rsc1578 or rs05788 SWALL:IF3_RALSO (SWALL:Q8XZ28) (178 aa) fasta scores: E(): 3.4e-51, 80.89% id in 178 aa. Note: The initiation codon does not transcribe for a M/V nor for a L; translation initiation factor IF-3 >2314699 infC 3091790 infC Burkholderia pseudomallei K96243 translation initiation factor IF-3 YP_108543.1 2314163 R 272560 CDS YP_108544.1 53719558 3092747 complement(2314737..2316644) 1 NC_006350.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2316644 thrS 3092747 thrS Burkholderia pseudomallei K96243 threonyl-tRNA synthetase YP_108544.1 2314737 R 272560 CDS YP_108545.1 53719559 3092789 complement(2317104..2319341) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 GTP pyrophosphokinase RelA or b2784 or z4099 or ecs3644 SWALL:RELA_ECOLI (SWALL:P11585) (744 aa) fasta scores: E(): 2.2e-60, 40.99% id in 705 aa, and to Ralstonia solanacearum probable GTP pyrophosphokinase rsc1576 or rs05786 SWALL:Q8XZ30 (EMBL:AL646065) (746 aa) fasta scores: E(): 1.1e-173, 67.96% id in 746 aa, and to Streptomyces coelicolor GTP pyrophosphokinase RelA or sco1513 or scl2.03C SWALL:RELA_STRCO (SWALL:P52560) (847 aa) fasta scores: E(): 1.6e-89, 39.49% id in 747 aa; GTP pyrophosphokinase 2319341 relA 3092789 relA Burkholderia pseudomallei K96243 GTP pyrophosphokinase YP_108545.1 2317104 R 272560 CDS YP_108546.1 53719560 3094675 complement(2319386..2319739) 1 NC_006350.1 Similar to Xanthomonas campestris hypothetical protein xcc1325 SWALL:AAM40623 (EMBL:AE012231) (115 aa) fasta scores: E(): 1.4e-23, 59.09% id in 110 aa, and to Pseudomonas aeruginosa hypothetical protein pa5303 SWALL:Q9HTQ1 (EMBL:AE004943) (117 aa) fasta scores: E(): 5e-22, 54.78% id in 115 aa; hypothetical protein 2319739 3094675 BPSL1947 Burkholderia pseudomallei K96243 hypothetical protein YP_108546.1 2319386 R 272560 CDS YP_108547.1 53719561 3094676 complement(2319812..2320717) 1 NC_006350.1 Similar to Ralstonia solanacearum hydrolase rsc1574 or rs05784 SWALL:Q8XZ32 (EMBL:AL646065) (289 aa) fasta scores: E(): 1.5e-71, 64.45% id in 287 aa, and to Acidovorax sp. SA1 d-(-)-3-hydroxybutyrate oligomer hydrolase SWALL:Q9F1T8 (EMBL:AB044565) (291 aa) fasta scores: E(): 1.4e-26, 36.82% id in 296 aa; hydrolase 2320717 3094676 BPSL1948 Burkholderia pseudomallei K96243 hydrolase YP_108547.1 2319812 R 272560 CDS YP_108548.1 53719562 3092824 complement(2322043..2322948) 1 NC_006350.1 Similar to Brucella melitensis transcriptional regulatory protein, LysR family bmeii1065 SWALL:Q8YB36 (EMBL:AE009739) (325 aa) fasta scores: E(): 5e-45, 47.4% id in 289 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family atu0664 or agr_c_1186 SWALL:Q8UHL6 (EMBL:AE009035) (299 aa) fasta scores: E(): 3.6e-40, 42.61% id in 298 aa; LysR family transcriptional regulator 2322948 3092824 BPSL1950 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108548.1 2322043 R 272560 CDS YP_108549.1 53719563 3094629 2323136..2323693 1 NC_006350.1 hypothetical protein 2323693 3094629 BPSL1951 Burkholderia pseudomallei K96243 hypothetical protein YP_108549.1 2323136 D 272560 CDS YP_108550.1 53719564 3094630 2323708..2324808 1 NC_006350.1 Similar to Synechocystis sp. hypothetical protein sll1306 SWALL:P73597 (EMBL:D90907) (335 aa) fasta scores: E(): 1.2e-45, 47.55% id in 307 aa, and to Brucella melitensis chitooligosaccharide deacetylase bmei1577 SWALL:Q8YFE5 (EMBL:AE009593) (475 aa) fasta scores: E(): 8.8e-16, 30.32% id in 277 aa; polysaccharide deacetylase 2324808 3094630 BPSL1952 Burkholderia pseudomallei K96243 polysaccharide deacetylase YP_108550.1 2323708 D 272560 CDS YP_108551.1 53719565 3094631 2324852..2325574 1 NC_006350.1 Similar to Rhizobium loti probable acyl-carrier protein reductase mlr2047 SWALL:Q98J89 (EMBL:AP002998) (242 aa) fasta scores: E(): 4.3e-28, 42.85% id in 238 aa, and to Streptomyces coelicolor oxidoreductase sco1831 or sci8.16 SWALL:Q9RJ37 (EMBL:AL132644) (251 aa) fasta scores: E(): 7.2e-15, 36.14% id in 249 aa; short chain dehydrogenase 2325574 3094631 BPSL1953 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_108551.1 2324852 D 272560 CDS YP_108552.1 53719566 3093133 complement(2325970..2326611) 1 NC_006350.1 Similar to Helicobacter pylori succinyl-CoA:3-ketoacid-coenzyme A transferase subunit C ScoB or hp0692 SWALL:SCOB_HELPY (SWALL:P56007) (207 aa) fasta scores: E(): 3.2e-47, 63.41% id in 205 aa, and to Xanthomonas campestris succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B LpsJ or WxcJ or xcc0628 SWALL:SCOB_XANCP (SWALL:O34263) (213 aa) fasta scores: E(): 9.1e-60, 77.51% id in 209 aa; succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B 2326611 scoB 3093133 scoB Burkholderia pseudomallei K96243 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B YP_108552.1 2325970 R 272560 CDS YP_108553.1 53719567 3093698 complement(2326613..2327317) 1 NC_006350.1 Similar to Helicobacter pylori succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A ScoA or hp0691 SWALL:SCOA_HELPY (SWALL:P56006) (232 aa) fasta scores: E(): 6.8e-52, 60.17% id in 231 aa, and to Xanthomonas campestris succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A LpsI or WxcI or xcc0627 SWALL:SCOA_XANCP (SWALL:O34264) (242 aa) fasta scores: E(): 8.2e-73, 80.6% id in 232 aa; succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A 2327317 scoA 3093698 scoA Burkholderia pseudomallei K96243 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A YP_108553.1 2326613 R 272560 CDS YP_108554.1 53719568 3094632 2327570..2328115 1 NC_006350.1 Similar to Ralstonia solanacearum transcription regulator protein rsc1569 or rs05256 SWALL:Q8XZ37 (EMBL:AL646065) (181 aa) fasta scores: E(): 5.4e-49, 67.95% id in 181 aa, and to Bradyrhizobium japonicum hypothetical 22.5 kDa protein SWALL:Q93SH9 (EMBL:AJ311165) (206 aa) fasta scores: E(): 0.00023, 28.48% id in 165 aa, and high similarity to the DNA-binding domain of Escherichia coli, and Escherichia coli O157:H7 transcriptional regulatory protein UhpA or b3669 or z5159 or ecs4606 SWALL:UHPA_ECOLI (SWALL:P10940) (196 aa) fasta scores: E(): 0.0076, 42.85% id in 56 aa; LuxR family transcriptional regulator 2328115 3094632 BPSL1956 Burkholderia pseudomallei K96243 LuxR family transcriptional regulator YP_108554.1 2327570 D 272560 CDS YP_108555.1 53719569 3091858 2328707..2330239 1 NC_006350.1 lipoprotein 2330239 3091858 BPSL1957 Burkholderia pseudomallei K96243 lipoprotein YP_108555.1 2328707 D 272560 CDS YP_108556.1 53719570 3091859 2331168..2332241 1 NC_006350.1 No significant database matches. Note: Contains the following variable repeat throughout the full length of the CDS: 6x[AASNQFGIPNQTDVFAVXXS/NGA/SLXVA/SWVVSAXXWNGPXXIXXAGXFPA/ S XAXV]; hypothetical protein 2332241 3091859 BPSL1958 Burkholderia pseudomallei K96243 hypothetical protein YP_108556.1 2331168 D 272560 CDS YP_108557.1 53719571 3094595 complement(2332619..2333050) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa2801 pa2801 SWALL:Q9I042 (EMBL:AE004707) (134 aa) fasta scores: E(): 1.2e-18, 41.79% id in 134 aa, and to Xanthomonas campestris hypothetical protein Xcc1147 xcc1147 SWALL:AAM40446 (EMBL:AE012213) (134 aa) fasta scores: E(): 1.6e-12, 35.6% id in 132 aa; thioesterase 2333050 3094595 BPSL1959 Burkholderia pseudomallei K96243 thioesterase YP_108557.1 2332619 R 272560 CDS YP_108558.1 53719572 3094596 complement(2333095..2333874) 1 NC_006350.1 Similar to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SWALL:GNO_GLUOX (SWALL:P50199) (256 aa) fasta scores: E(): 3.4e-24, 36.9% id in 252 aa, and to Rhodobacter sphaeroides sorbitol dehydrogenase PolS or SmoS SWALL:DHSO_RHOSH (SWALL:Q59787) (256 aa) fasta scores: E(): 6.8e-24, 36.78% id in 261 aa; short chain dehydrogenase 2333874 3094596 BPSL1960 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_108558.1 2333095 R 272560 CDS YP_108559.1 53719573 3094771 2334055..2335728 1 NC_006350.1 Similar to Acinetobacter calcoaceticus probable electron transfer flavoprotein-ubiquinone oxidoreductase SWALL:ETFD_ACICA (SWALL:P94132) (570 aa) fasta scores: E(): 1.6e-93, 61.97% id in 568 aa, and to Ralstonia solanacearum probable electron transfer flavoprotein-ubiquinone oxidoreductase rsc1567 or rs05254 SWALL:Q8XZ39 (EMBL:AL646065) (562 aa) fasta scores: E(): 4.8e-157, 69.75% id in 562 aa; electron transport protein 2335728 3094771 BPSL1961 Burkholderia pseudomallei K96243 electron transport protein YP_108559.1 2334055 D 272560 CDS YP_108560.1 53719574 3092463 complement(2335915..2337024) 1 NC_006350.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2337024 aroC 3092463 aroC Burkholderia pseudomallei K96243 chorismate synthase YP_108560.1 2335915 R 272560 CDS YP_108561.1 53719575 3094772 complement(2337389..2339323) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1564 or rs05251 SWALL:Q8XZ42 (EMBL:AL646065) (635 aa) fasta scores: E(): 1.2e-164, 65.45% id in 634 aa, and to Neisseria meningitidis transporter nmb1515 SWALL:Q9JYM2 (EMBL:AE002501) (436 aa) fasta scores: E(): 2.8e-58, 40.32% id in 429 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 2339323 3094772 BPSL1963 Burkholderia pseudomallei K96243 hypothetical protein YP_108561.1 2337389 R 272560 CDS YP_108562.1 53719576 3094295 complement(2339423..2339887) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1563 or rs05250 SWALL:Q8XZ43 (EMBL:AL646065) (151 aa) fasta scores: E(): 6.6e-39, 70.66% id in 150 aa, and to Rhizobium loti hypothetical protein mlr0188 SWALL:Q98ND5 (EMBL:AP002994) (143 aa) fasta scores: E(): 1.1e-09, 33.33% id in 141 aa; hypothetical protein 2339887 3094295 BPSL1964 Burkholderia pseudomallei K96243 hypothetical protein YP_108562.1 2339423 R 272560 CDS YP_108563.1 53719577 3094296 2340104..2340424 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc1560 or rs05247 SWALL:Q8XZ46 (EMBL:AL646065) (105 aa) fasta scores: E(): 3e-25, 67% id in 100 aa, and to Caulobacter crescentus hypothetical protein cc3163 SWALL:Q9A3N9 (EMBL:AE005980) (208 aa) fasta scores: E(): 2.8e-18, 57.44% id in 94 aa; hypothetical protein 2340424 3094296 BPSL1965 Burkholderia pseudomallei K96243 hypothetical protein YP_108563.1 2340104 D 272560 CDS YP_108564.1 53719578 3094823 complement(2340641..2341945) 1 NC_006350.1 N-terminal region similar to Escherichia coli, and Escherichia coli O157:H7 tRNA processing exoribonuclease BN Rbn or b3886 or z5425 or ecs4809 SWALL:RBN_ECOLI (SWALL:P32146) (290 aa) fasta scores: E(): 9.6e-33, 40.07% id in 257 aa and full length to Ralstonia solanacearum tRNA processing exoribonuclease BN transmembrane protein rsc1559 or rs05246 SWALL:Q8XZ47 (EMBL:AL646065) (441 aa) fasta scores: E(): 6.2e-63, 45.34% id in 430 aa; tRNA processing exoribonuclease 2341945 3094823 BPSL1966 Burkholderia pseudomallei K96243 tRNA processing exoribonuclease YP_108564.1 2340641 R 272560 CDS YP_108565.1 53719579 3094824 2342060..2342668 1 NC_006350.1 Similar to Escherichia coli flavoprotein (Trp repressor binding protein) WrbA or b1004 SWALL:WRBA_ECOLI (SWALL:P30849) (197 aa) fasta scores: E(): 5.2e-19, 40.3% id in 196 aa, and to Ralstonia solanacearum probable Trp repressor binding protein rsc1558 or rs05245 SWALL:Q8XZ48 (EMBL:AL646065) (201 aa) fasta scores: E(): 3.9e-54, 72.86% id in 199 aa; Trp repressor binding protein 2342668 3094824 BPSL1967 Burkholderia pseudomallei K96243 Trp repressor binding protein YP_108565.1 2342060 D 272560 CDS YP_108566.1 53719580 3093100 2342665..2343114 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1557 or rs05244 SWALL:Q8XZ49 (EMBL:AL646065) (129 aa) fasta scores: E(): 5.4e-20, 54.76% id in 126 aa, and to Neisseria meningitidis hypothetical protein nma0801 SWALL:Q9JVK4 (EMBL:AL162754) (117 aa) fasta scores: E(): 2.4e-12, 44.54% id in 110 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein 2343114 3093100 BPSL1968 Burkholderia pseudomallei K96243 hypothetical protein YP_108566.1 2342665 D 272560 CDS YP_108567.1 53719581 3093101 2343149..2344570 1 NC_006350.1 Similar to Ralstonia solanacearum probable oxidoreductase rsc1556 or rs05243 SWALL:Q8XZ50 (EMBL:AL646065) (470 aa) fasta scores: E(): 1.1e-123, 71.73% id in 467 aa, and to Rhizobium loti oxidoreductase mlr7440 SWALL:Q986B0 (EMBL:AP003011) (476 aa) fasta scores: E(): 1.7e-87, 52.24% id in 467 aa; FAD-binding reductase 2344570 3093101 BPSL1969 Burkholderia pseudomallei K96243 FAD-binding reductase YP_108567.1 2343149 D 272560 CDS YP_108568.1 53719582 3093267 2344602..2345573 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0544 SWALL:Q9I5Z2 (EMBL:AE004490) (247 aa) fasta scores: E(): 1.9e-09, 36.27% id in 317 aa. Note: the central region of BPSL1970 does not present any similarities in the databases; calcineurin-like phosphoesterase 2345573 3093267 BPSL1970 Burkholderia pseudomallei K96243 calcineurin-like phosphoesterase YP_108568.1 2344602 D 272560 CDS YP_108569.1 53719583 3093268 complement(2345922..2346863) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3895 SWALL:Q9HXB8 (EMBL:AE004807) (317 aa) fasta scores: E(): 7.9e-76, 63.39% id in 306 aa, and to Klebsiella pneumoniae probable transcriptional regulator LtrA SWALL:LTRA_KLEPN (SWALL:P52689) (309 aa) fasta scores: E(): 3.1e-29, 32.67% id in 303 aa; LysR family transcriptional regulator 2346863 3093268 BPSL1971 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108569.1 2345922 R 272560 CDS YP_108570.1 53719584 3092307 2347021..2348973 1 NC_006350.1 Similar to Burkholderia cepacia fusaric acid resistance protein precursor FusA SWALL:FUSA_BURCE (SWALL:P24126) (530 aa) fasta scores: E(): 5.8e-82, 62.82% id in 538 aa, and to Pseudomonas aeruginosa outer membrane protein OprM precursor or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 1.2e-19, 28.84% id in 475 aa. Note: Contains a highly conserved repeat at the C-terminal region (from residue 496) that has no similarities to database entries; antibiotic resistance membrane protein 2348973 3092307 BPSL1972 Burkholderia pseudomallei K96243 antibiotic resistance membrane protein YP_108570.1 2347021 D 272560 CDS YP_108571.1 53719585 3092308 2348990..2351191 1 NC_006350.1 N-terminal region similar to Burkholderia cepacia fusaric acid resistance protein FusB SWALL:FUSB_BURCE (SWALL:P24127) (142 aa) fasta scores: E(): 5.2e-11, 71.23% id in 73 aa, central region to Burkholderia cepacia fusaric acid resistance protein FusC SWALL:FUSC_BURCE (SWALL:P24128) (346 aa) fasta scores: E(): 2.5e-99, 78.77% id in 344 aa, and C-terminal region to Burkholderia cepacia fusaric acid resistance protein FusD fusD SWALL:FUSD_BURCE (SWALL:P24129) (208 aa) fasta scores: E(): 7.6e-54, 75.59% id in 209 aa. Note: Seems to be a fusion of the three CDSs from Burkholderia cepacia; antibiotic resistance protein 2351191 3092308 BPSL1973 Burkholderia pseudomallei K96243 antibiotic resistance protein YP_108571.1 2348990 D 272560 CDS YP_108572.1 53719586 3094873 2351188..2351391 1 NC_006350.1 Similar to Brucella melitensis hypothetical membrane associated protein bmeii0532 SWALL:Q8YCJ6 (EMBL:AE009689) (69 aa) fasta scores: E(): 0.00012, 40.67% id in 59 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein YhcR or stm3366 or sty3546A SWALL:Q8XEK3 (EMBL:AE008855) (67 aa) fasta scores: E(): 0.0019, 30.76% id in 52 aa; hypothetical protein 2351391 3094873 BPSL1974 Burkholderia pseudomallei K96243 hypothetical protein YP_108572.1 2351188 D 272560 CDS YP_108573.1 53719587 3094874 2351393..2352286 1 NC_006350.1 Full length similar to Pseudomonas aeruginosa hypothetical protein pa3892 SWALL:Q9HXC1 (EMBL:AE004806) (302 aa) fasta scores: E(): 3.2e-74, 67.59% id in 287 aa, and to Escherichia coli multidrug resistance protein K EmrK or b2368 SWALL:EMRK_ECOLI (SWALL:P52599) (387 aa) fasta scores: E(): 4.6e-09, 28.35% id in 335 aa, and C-terminal region to Burkholderia cepacia fusaric acid resistance protein FusE SWALL:FUSE_BURCE (SWALL:P24130) (168 aa) fasta scores: E(): 7.1e-46, 81.65% id in 169 aa; antibiotic resistance protein 2352286 3094874 BPSL1975 Burkholderia pseudomallei K96243 antibiotic resistance protein YP_108573.1 2351393 D 272560 CDS YP_108574.1 53719588 3092697 complement(2352657..2354333) 1 NC_006350.1 Similar to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM or b1886 SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 3.5e-50, 41.28% id in 528 aa, and to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc2799 or rs05622 SWALL:Q8XVN1 (EMBL:AL646071) (515 aa) fasta scores: E(): 4.2e-61, 47.82% id in 529 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; chemotaxis methyl-accepting membrane protein 2354333 3092697 BPSL1976 Burkholderia pseudomallei K96243 chemotaxis methyl-accepting membrane protein YP_108574.1 2352657 R 272560 CDS YP_108575.1 53719589 3093901 2354685..2355935 1 NC_006350.1 Similar to Escherichia coli fosmidomycin resistance protein Fsr or b0479 SWALL:FSR_ECOLI (SWALL:P52067) (406 aa) fasta scores: E(): 1.1e-99, 67.48% id in 406 aa, and to Ralstonia solanacearum fosmidomycin resistance antibiotic resistance transmembrane protein Fsr or rsp0412 or rs00869 SWALL:Q8XSQ5 (EMBL:AL646078) (411 aa) fasta scores: E(): 3.8e-103, 70.85% id in 398 aa; fosmidomycin resistance protein 2355935 fsr 3093901 fsr Burkholderia pseudomallei K96243 fosmidomycin resistance protein YP_108575.1 2354685 D 272560 CDS YP_108576.1 53719590 3092698 complement(2356296..2357084) 1 NC_006350.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2357084 3092698 BPSL1978 Burkholderia pseudomallei K96243 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_108576.1 2356296 R 272560 CDS YP_108577.1 53719591 3094437 complement(2357081..2359444) 1 NC_006350.1 Similar to Escherichia coli DNA helicase II UvrD or MutU or PdeB or Rad or RecL or b3813 SWALL:UVRD_ECOLI (SWALL:P03018) (720 aa) fasta scores: E(): 8.9e-94, 45.2% id in 792 aa, and to Ralstonia solanacearum probable DNA helicase II protein rsc2235 or rs01364 SWALL:Q8XX81 (EMBL:AL646069) (829 aa) fasta scores: E(): 4.8e-211, 68.44% id in 805 aa; helicase 2359444 3094437 BPSL1979 Burkholderia pseudomallei K96243 helicase YP_108577.1 2357081 R 272560 CDS YP_108578.1 53719592 3094083 2359584..2362451 1 NC_006350.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2362451 valS 3094083 valS Burkholderia pseudomallei K96243 valyl-tRNA synthetase YP_108578.1 2359584 D 272560 CDS YP_108579.1 53719593 3092713 2362538..2363419 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri UTP--glucose-1-phosphate uridylyltransferase GalU or b1236 or z2012 or ecs1738 SWALL:GALU_ECOLI (SWALL:P25520) (301 aa) fasta scores: E(): 5.6e-51, 54.82% id in 290 aa, and to Burkholderia pseudomallei UTP-glucose-1-phosphate uridylyltransferase SWALL:Q9F5N4 (EMBL:AF312223) (295 aa) fasta scores: E(): 2.7e-92, 83.91% id in 286 aa; UTP-glucose-1-phosphate uridylyltransferase 2363419 galU 3092713 galU Burkholderia pseudomallei K96243 UTP-glucose-1-phosphate uridylyltransferase YP_108579.1 2362538 D 272560 CDS YP_108580.1 53719594 3094438 complement(2363480..2364097) 1 NC_006350.1 Low similarity to Ralstonia solanacearum probable lipoprotein transmembrane rsc2124 or rs01480 SWALL:Q8XXI9 (EMBL:AL646068) (213 aa) fasta scores: E(): 0.00015, 31.94% id in 216 aa; lipoprotein 2364097 3094438 BPSL1982 Burkholderia pseudomallei K96243 lipoprotein YP_108580.1 2363480 R 272560 CDS YP_108581.1 53719595 3094759 complement(2364186..2366579) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable two-component sensor pa4036 SWALL:Q9HWZ1 (EMBL:AE004820) (766 aa) fasta scores: E(): 1.4e-49, 39.2% id in 806 aa, and to Caulobacter crescentus sensory box histidine kinase, cc3327 SWALL:Q9A377 (EMBL:AE005994) (761 aa) fasta scores: E(): 1.3e-22, 35.7% id in 801 aa; two component system histidine kinase 2366579 3094759 BPSL1983 Burkholderia pseudomallei K96243 two component system histidine kinase YP_108581.1 2364186 R 272560 CDS YP_108582.1 53719596 3094760 complement(2366590..2367936) 1 NC_006350.1 Similar to Caulobacter crescentus peptidoglycan binding domain protein cc3326 SWALL:Q9A378 (EMBL:AE005994) (457 aa) fasta scores: E(): 9.1e-42, 36.19% id in 442 aa, and to Ralstonia solanacearum probable signal peptide protein rsc1074 or rs04113 SWALL:Q8Y0H0 (EMBL:AL646062) (568 aa) fasta scores: E(): 1.1e-24, 30.58% id in 425 aa; hypothetical protein 2367936 3094760 BPSL1984 Burkholderia pseudomallei K96243 hypothetical protein YP_108582.1 2366590 R 272560 CDS YP_108583.1 53719597 3094683 complement(2367951..2368679) 1 NC_006350.1 Similar to Caulobacter crescentus DNA-binding response regulator cc3325 SWALL:Q9A379 (EMBL:AE005994) (236 aa) fasta scores: E(): 1.3e-36, 43.36% id in 226 aa, and to Rhizobium meliloti phosphate regulon transcriptional regulatory protein PhoB or r00515 or smc02140 SWALL:PHOB_RHIME (SWALL:Q52990) (227 aa) fasta scores: E(): 2.8e-20, 34.66% id in 225 aa; two component system response regulator 2368679 3094683 BPSL1985 Burkholderia pseudomallei K96243 two component system response regulator YP_108583.1 2367951 R 272560 CDS YP_108584.1 53719598 3094684 complement(2368983..2369369) 1 NC_006350.1 hypothetical protein 2369369 3094684 BPSL1986 Burkholderia pseudomallei K96243 hypothetical protein YP_108584.1 2368983 R 272560 CDS YP_108585.1 53719599 3093642 complement(2369645..2369875) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 SirA protein or b3470 or z4844 or ecs4319 SWALL:SIRA_ECOLI (SWALL:P37618) (81 aa) fasta scores: E(): 0.00021, 31.88% id in 69 aa, and to Ralstonia solanacearum hypothetical protein rsc0810 or rs05012 SWALL:Q8Y180 (EMBL:AL646061) (75 aa) fasta scores: E(): 3e-20, 73.68% id in 76 aa; hypothetical protein 2369875 3093642 BPSL1987 Burkholderia pseudomallei K96243 hypothetical protein YP_108585.1 2369645 R 272560 CDS YP_108586.1 53719600 3093643 complement(2370040..2371077) 1 NC_006350.1 Similar to Clostridium perfringens probable dehydrogenase cpe0093 SWALL:Q8XP72 (EMBL:AP003185) (349 aa) fasta scores: E(): 5.5e-46, 39.05% id in 338 aa, and to Rhizobium meliloti myo-inositol 2-dehydrogenase IdhA or rb1194 or smb20899 SWALL:MI2D_RHIME (SWALL:O68965) (330 aa) fasta scores: E(): 2.5e-27, 34.21% id in 342 aa. Note: Also similar to the upstream CDS, BPSL1989 (344 aa) fasta scores: E(): 7.2e-29, 35.362% identity in 345 aa overlap; oxidoreductase 2371077 3093643 BPSL1988 Burkholderia pseudomallei K96243 oxidoreductase YP_108586.1 2370040 R 272560 CDS YP_108587.1 53719601 3093644 complement(2371090..2372109) 1 NC_006350.1 Similar to Caulobacter crescentus myo-inositol 2-dehydrogenase cc1296 SWALL:Q9A8Q7 (EMBL:AE005804) (328 aa) fasta scores: E(): 2.1e-58, 49.54% id in 327 aa, and to Rhizobium meliloti myo-inositol 2-dehydrogenase IdhA or rb1194 or smb20899 SWALL:MI2D_RHIME (SWALL:O68965) (330 aa) fasta scores: E(): 1.1e-51, 46.64% id in 328 aa. Note: Also similar to the downstream CDS, BPSL1988 (346 aa) fasta scores: E(): 4.5e-27, 35.362% identity in 345 aa overlap; oxidoreductase 2372109 3093644 BPSL1989 Burkholderia pseudomallei K96243 oxidoreductase YP_108587.1 2371090 R 272560 CDS YP_108588.1 53719602 3093645 complement(2372102..2372983) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1249 or rs02757 SWALL:Q8XZZ6 (EMBL:AL646063) (302 aa) fasta scores: E(): 1.1e-44, 47.2% id in 286 aa, and to Caulobacter crescentus sis domain protein cc1297 SWALL:Q9A8Q6 (EMBL:AE005804) (291 aa) fasta scores: E(): 1e-32, 35.88% id in 287 aa; transcriptional regulatory protein 2372983 3093645 BPSL1990 Burkholderia pseudomallei K96243 transcriptional regulatory protein YP_108588.1 2372102 R 272560 CDS YP_108589.1 53719603 3093898 2373228..2374277 1 NC_006350.1 Similar to Rhizobium loti probable secreted solute binding protein mll1004 SWALL:Q98LI9 (EMBL:AP002996) (316 aa) fasta scores: E(): 5.6e-29, 32.74% id in 342 aa, and to Escherichia coli D-ribose-binding periplasmic protein precursor RbsB or RbsP or PrlB or b3751 SWALL:RBSB_ECOLI (SWALL:P02925) (296 aa) fasta scores: E(): 3.8e-07, 24.81% id in 270 aa; sugar ABC transporter substrate-binding periplasmic protein 2374277 3093898 BPSL1991 Burkholderia pseudomallei K96243 sugar ABC transporter substrate-binding periplasmic protein YP_108589.1 2373228 D 272560 CDS YP_108590.1 53719604 3093899 2374378..2375523 1 NC_006350.1 Similar to Rhizobium loti permease of sugar ABC transporter mll1003 SWALL:Q98LJ0 (EMBL:AP002996) (373 aa) fasta scores: E(): 1e-65, 52.86% id in 367 aa, and to Brucella melitensis sugar transport system permease bmei0664 SWALL:Q8YHY1 (EMBL:AE009508) (387 aa) fasta scores: E(): 5.9e-64, 52.39% id in 376 aa; sugar ABC transporter membrane protein 2375523 3093899 BPSL1992 Burkholderia pseudomallei K96243 sugar ABC transporter membrane protein YP_108590.1 2374378 D 272560 CDS YP_108591.1 53719605 3092150 2375536..2376336 1 NC_006350.1 Similar to Brucella melitensis sugar transport ATP-binding protein bmei0665 SWALL:Q8YHY0 (EMBL:AE009508) (259 aa) fasta scores: E(): 1.3e-50, 58.55% id in 263 aa, and to Rhizobium loti ATP-binding protein of sugar ABC transporter mlr2442 SWALL:Q98IE2 (EMBL:AP002999) (264 aa) fasta scores: E(): 6.2e-50, 63.05% id in 249 aa; ABC transporter ATP-binding protein 2376336 3092150 BPSL1993 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_108591.1 2375536 D 272560 CDS YP_108592.1 53719606 3092151 2376350..2378350 1 NC_006350.1 Similar to Ralstonia solanacearum probable transferase kinase rsc1240 or rs02748 SWALL:Q8Y005 (EMBL:AL646063) (650 aa) fasta scores: E(): 3.1e-139, 57.25% id in 655 aa, and N-trminal region to Bacillus subtilis protein IolC or e83c SWALL:IOLC_BACSU (SWALL:P42414) (325 aa) fasta scores: E(): 2.1e-17, 28.57% id in 343 aa; carbohydrate kinase 2378350 3092151 BPSL1994 Burkholderia pseudomallei K96243 carbohydrate kinase YP_108592.1 2376350 D 272560 CDS YP_108593.1 53719607 3092053 2378361..2380346 1 NC_006350.1 Similar to Ralstonia solanacearum acetolactate synthase rsc1239 or rs02747 SWALL:Q8Y006 (EMBL:AL646063) (627 aa) fasta scores: E(): 4e-135, 62.88% id in 625 aa, and to Bacillus subtilis probable malonic semialdehyde oxidative decarboxylase IolD or e83d SWALL:IOLD_BACSU (SWALL:P42415) (580 aa) fasta scores: E(): 3.4e-43, 40.82% id in 583 aa, and to Spirulina platensis acetolactate synthase IlvY SWALL:ILVB_SPIPL (SWALL:P27868) (579 aa) fasta scores: E(): 3.1e-22, 28.51% id in 540 aa; TPP-binding acetolactate synthase 2380346 3092053 BPSL1995 Burkholderia pseudomallei K96243 TPP-binding acetolactate synthase YP_108593.1 2378361 D 272560 CDS YP_108594.1 53719608 3092054 2380343..2381263 1 NC_006350.1 Similar to Yersinia pestis hypothetical protein ypo2586 SWALL:Q8ZDI2 (EMBL:AJ414152) (306 aa) fasta scores: E(): 3e-62, 56.94% id in 288 aa, and to Rhizobium meliloti rhizopine catabolism protein MocC SWALL:MOCC_RHIME (SWALL:P49304) (325 aa) fasta scores: E(): 1.1e-54, 50.85% id in 291 aa; amine catabolism-like protein 2381263 3092054 BPSL1996 Burkholderia pseudomallei K96243 amine catabolism-like protein YP_108594.1 2380343 D 272560 CDS YP_108595.1 53719609 3093299 2381263..2382066 1 NC_006350.1 Similar to Ralstonia solanacearum myo-inositol catabolism protein rsc1237 or rs02745 SWALL:Q8Y008 (EMBL:AL646063) (271 aa) fasta scores: E(): 1.6e-60, 60.83% id in 263 aa, and to Bacillus subtilis protein IolB or e83b SWALL:IOLB_BACSU (SWALL:P42413) (271 aa) fasta scores: E(): 2.3e-41, 46.61% id in 251 aa; hypothetical protein 2382066 3093299 BPSL1997 Burkholderia pseudomallei K96243 hypothetical protein YP_108595.1 2381263 D 272560 CDS YP_108596.1 53719610 3093300 complement(2382183..2382887) 1 NC_006350.1 Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 2.1e-19, 36.36% id in 220 aa, and to Brucella melitensis high-affinity branched-chain amino acid transport ATP-binding protein bmeii0065 SWALL:Q8YDV9 (EMBL:AE009645) (238 aa) fasta scores: E(): 3.4e-28, 45.29% id in 234 aa; branched amino acid transport system protein 2382887 3093300 BPSL1998 Burkholderia pseudomallei K96243 branched amino acid transport system protein YP_108596.1 2382183 R 272560 CDS YP_108597.1 53719611 3094719 complement(2382884..2385214) 1 NC_006350.1 N-terminal region similar to Ralstonia solanacearum probable amino acid transport system permease lipoprotein transmembrane rsc1752 or rs02940 SWALL:Q8XYK6 (EMBL:AL646066) (440 aa) fasta scores: E(): 1.9e-34, 46.79% id in 421 aa, and C-terminal region similar to Ralstonia solanacearum probable amino-acid ATP-binding ABC transporter protein rsc1753 or rs02941 SWALL:Q8XYK5 (EMBL:AL646066) (266 aa) fasta scores: E(): 8.2e-34, 53.57% id in 252 aa, and to Escherichia coli, and Escherichia coli O157:H7 high-affinity branched-chain amino acid transport ATP-binding protein LivG or b3455 or z4825 or ecs4302 SWALL:LIVG_ECOLI (SWALL:P22730) (255 aa) fasta scores: E(): 5.2e-16, 36.29% id in 259 aa. Note: This CDS appears to be a funsion of a membrane transport related protein and an ATP-binding transport related protein; branched amino acid related transport system, bifunctional protein (membrane and ATP-binding) 2385214 3094719 BPSL1999 Burkholderia pseudomallei K96243 branched amino acid related transport system, bifunctional protein (membrane and ATP-binding) YP_108597.1 2382884 R 272560 CDS YP_108598.1 53719612 3094720 complement(2385207..2386142) 1 NC_006350.1 Similar to Ralstonia solanacearum amino acid transmembrane transmembrane protein rsc1751 or rs02939 SWALL:Q8XYK7 (EMBL:AL646066) (315 aa) fasta scores: E(): 1.4e-58, 58.59% id in 314 aa, and to Brucella melitensis high-affinity branched-chain amino acid transport system permease bmeii0068 SWALL:Q8YDV6 (EMBL:AE009645) (332 aa) fasta scores: E(): 9e-42, 44.79% id in 317 aa; branched amino acid transport system, membrane protein 2386142 3094720 BPSL2000 Burkholderia pseudomallei K96243 branched amino acid transport system, membrane protein YP_108598.1 2385207 R 272560 CDS YP_108599.1 53719613 3091833 complement(2386147..2386596) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5185 SWALL:Q9HU04 (EMBL:AE004931) (147 aa) fasta scores: E(): 1.6e-34, 60.95% id in 146 aa, and to Mycobacterium tuberculosis hypothetical protein rv0163 or mt0172 or mtci28.03 SWALL:O07408 (EMBL:Z97050) (151 aa) fasta scores: E(): 4.2e-22, 45.32% id in 139 aa; thioesterase 2386596 3091833 BPSL2001 Burkholderia pseudomallei K96243 thioesterase YP_108599.1 2386147 R 272560 CDS YP_108600.1 53719614 3091834 complement(2386847..2387995) 1 NC_006350.1 Similar to Citrobacter freundii 1,3-propanediol dehydrogenase DhaT SWALL:DHAT_CITFR (SWALL:P45513) (387 aa) fasta scores: E(): 5.4e-34, 36.79% id in 375 aa, to Bacillus subtilis alcohol dehydrogenase GbsB SWALL:GBSB_BACSU (SWALL:P71017) (402 aa) fasta scores: E(): 1e-28, 33.42% id in 371 aa, and to Ralstonia solanacearum probable NAD-dependent 4-hydroxybutyrate dehydrogenase oxidoreductase rsc1771 or rs02958 SWALL:Q8XYI7 (EMBL:AL646066) (382 aa) fasta scores: E(): 5.7e-117, 80.89% id in 382 aa; iron-containing alcohol dehydrogenase 2387995 3091834 BPSL2002 Burkholderia pseudomallei K96243 iron-containing alcohol dehydrogenase YP_108600.1 2386847 R 272560 CDS YP_108601.1 53719615 3094867 2388211..2388546 1 NC_006350.1 Similar to Sulfolobus tokodaii hypothetical protein st1080 SWALL:Q972Q3 (EMBL:AP000984) (114 aa) fasta scores: E(): 1.5e-14, 44.76% id in 105 aa, and to Thermotoga maritima hypothetical protein tm0763 SWALL:Y763_THEMA (SWALL:Q9WZM2) (106 aa) fasta scores: E(): 4.3e-13, 44.55% id in 101 aa; hypothetical protein 2388546 3094867 BPSL2003 Burkholderia pseudomallei K96243 hypothetical protein YP_108601.1 2388211 D 272560 CDS YP_108602.1 53719616 3094868 complement(2388646..2389275) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0809 or rs05013 SWALL:Q8Y181 (EMBL:AL646061) (193 aa) fasta scores: E(): 3.4e-45, 64.24% id in 179 aa, and to Pseudomonas aeruginosa NADH pyrophosphatase NudC or pa1823 SWALL:NUDC_PSEAE (SWALL:O86062) (278 aa) fasta scores: E(): 2.1e-05, 27.1% id in 166 aa; phosphatase 2389275 3094868 BPSL2004 Burkholderia pseudomallei K96243 phosphatase YP_108602.1 2388646 R 272560 CDS YP_108603.1 53719617 3091940 2389489..2390166 1 NC_006350.1 hypothetical protein 2390166 3091940 BPSL2005 Burkholderia pseudomallei K96243 hypothetical protein YP_108603.1 2389489 D 272560 CDS YP_108604.1 53719618 3091941 complement(2390396..2391952) 1 NC_006350.1 Similar to Ralstonia solanacearum probable protease signal peptide protein rsp1552 or rs02108 SWALL:Q8XPT5 (EMBL:AL646085) (490 aa) fasta scores: E(): 2.9e-37, 45.17% id in 518 aa, and to Pseudomonas aeruginosa serine protease MucD or pa0766 SWALL:Q57155 (EMBL:U49151) (474 aa) fasta scores: E(): 4.1e-25, 38.26% id in 473 aa; hypothetical protein 2391952 3091941 BPSL2006 Burkholderia pseudomallei K96243 hypothetical protein YP_108604.1 2390396 R 272560 CDS YP_108605.1 53719619 3093972 complement(2392284..2393978) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0805 or rs05564 SWALL:Q8Y185 (EMBL:AL646061) (409 aa) fasta scores: E(): 1.3e-25, 38.04% id in 552 aa, and to Pseudomonas aeruginosa hypothetical protein pa1412 SWALL:Q9I3T2 (EMBL:AE004570) (397 aa) fasta scores: E(): 2.8e-11, 30.25% id in 542 aa. Note: The similarities annotated comprise the N-terminal and the C-terminal region of this CDS and the database matches, leaving the central part, where the repeats are, with no similarities to any of the database matches; hypothetical protein 2393978 3093972 BPSL2007 Burkholderia pseudomallei K96243 hypothetical protein YP_108605.1 2392284 R 272560 CDS YP_108606.1 53719620 3093973 2394125..2395090 1 NC_006350.1 Similar to Bacillus subtilis transcriptional regulatory protein GltR SWALL:GLTR_BACSU (SWALL:P94501) (296 aa) fasta scores: E(): 1.6e-32, 37.93% id in 290 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0804 or rs05024 SWALL:Q8Y186 (EMBL:AL646061) (302 aa) fasta scores: E(): 3.4e-55, 56.16% id in 292 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; LysR family transcriptional regulator 2395090 3093973 BPSL2008 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108606.1 2394125 D 272560 CDS YP_108607.1 53719621 3094503 complement(2395633..2398257) 1 NC_006350.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2398257 alaS 3094503 alaS Burkholderia pseudomallei K96243 alanyl-tRNA synthetase YP_108607.1 2395633 R 272560 CDS YP_108608.1 53719622 3093635 2398792..2400012 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc0796 or rs05041 SWALL:Q8Y194 (EMBL:AL646061) (420 aa) fasta scores: E(): 7.9e-124, 76.1% id in 406 aa, and to Pseudomonas aeruginosa hypothetical protein pa0446 SWALL:Q9I672 (EMBL:AE004482) (407 aa) fasta scores: E(): 8e-103, 64.44% id in 405 aa; lipid metabolism-like protein 2400012 3093635 BPSL2010 Burkholderia pseudomallei K96243 lipid metabolism-like protein YP_108608.1 2398792 D 272560 CDS YP_108609.1 53719623 3093636 complement(2400341..2400547) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 osmotically inducible lipoprotein B precursor OsmB or b1283 or z2523 or ecs1856 SWALL:OSMB_ECOLI (SWALL:P17873) (72 aa) fasta scores: E(): 0.0073, 45.9% id in 61 aa, and to Ralstonia solanacearum osmotically inducible lipoprotein transmembrane rsc1973 or rs03547 SWALL:Q8XXZ0 (EMBL:AL646067) (66 aa) fasta scores: E(): 0.00021, 51.85% id in 54 aa; osmosis-related lipoprotein 2400547 3093636 BPSL2011 Burkholderia pseudomallei K96243 osmosis-related lipoprotein YP_108609.1 2400341 R 272560 CDS YP_108610.1 53719624 3091627 2400830..2402539 1 NC_006350.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2402539 glnS 3091627 glnS Burkholderia pseudomallei K96243 glutaminyl-tRNA synthetase YP_108610.1 2400830 D 272560 CDS YP_108611.1 53719625 3094195 complement(2402897..2403370) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0747 or rs05106 SWALL:Q8Y1E3 (EMBL:AL646060) (153 aa) fasta scores: E(): 1.7e-30, 57.71% id in 149 aa, and to Bacteriophage T4 hypothetical 17.7 kDa protein in e-segB intergenic region Y06l or E.1 or Msp8 SWALL:Y06L_BPT4 (SWALL:P32271) (151 aa) fasta scores: E(): 1.2e-10, 41.12% id in 124 aa; NUDIX family hydrolase 2403370 3094195 BPSL2013 Burkholderia pseudomallei K96243 NUDIX family hydrolase YP_108611.1 2402897 R 272560 CDS YP_108612.1 53719626 3094196 complement(2403398..2403784) 1 NC_006350.1 hypothetical protein 2403784 3094196 BPSL2014 Burkholderia pseudomallei K96243 hypothetical protein YP_108612.1 2403398 R 272560 CDS YP_108613.1 53719627 3091655 complement(2404072..2406120) 1 NC_006350.1 Similar to Alteromonas sp. beta-hexosaminidase A precursor Cht60 SWALL:HEXA_ALTSO (SWALL:P48823) (598 aa) fasta scores: E(): 2.1e-59, 35.98% id in 628 aa, and to Ralstonia solanacearum hydrolase glycosidase rsc0769 or rs05085 SWALL:Q8Y1C1 (EMBL:AL646060) (734 aa) fasta scores: E(): 3.1e-152, 61.84% id in 684 aa; membrane attached glycosyl hydrolase 2406120 3091655 BPSL2015 Burkholderia pseudomallei K96243 membrane attached glycosyl hydrolase YP_108613.1 2404072 R 272560 CDS YP_108614.1 53719628 3091656 2406423..2407133 1 NC_006350.1 hypothetical protein 2407133 3091656 BPSL2016 Burkholderia pseudomallei K96243 hypothetical protein YP_108614.1 2406423 D 272560 CDS YP_108615.1 53719629 3094838 complement(2407186..2408571) 1 NC_006350.1 Similar to Methylobacterium extorquens methylamine utilization protein MauG SWALL:MAUG_METEX (SWALL:Q49128) (353 aa) fasta scores: E(): 0.051, 28.6% id in 451 aa, and to Ralstonia solanacearum probable lipoprotein transmembrane rsp1173 or rs05063 SWALL:Q8XQP8 (EMBL:AL646083) (441 aa) fasta scores: E(): 4.2e-76, 53.88% id in 451 aa. CDS is extended at the N-terminus in comparison to some orthologues; di-heme cytochrome c peroxidase 2408571 3094838 BPSL2017 Burkholderia pseudomallei K96243 di-heme cytochrome c peroxidase YP_108615.1 2407186 R 272560 CDS YP_108616.1 53719630 3094839 2408727..2410400 1 NC_006350.1 Similar to Burkholderia pseudomallei acid phosphatase AcpA SWALL:Q9L5C5 (EMBL:AF252862) (577 aa) fasta scores: E(): 5.5e-101, 55.68% id in 537 aa, and to Ralstonia solanacearum acid phosphatase rsp1174 or rs05064 SWALL:Q8XQP7 (EMBL:AL646083) (715 aa) fasta scores: E(): 1.1e-96, 63.1% id in 515 aa; acid phosphatase 2410400 3094839 BPSL2018 Burkholderia pseudomallei K96243 acid phosphatase YP_108616.1 2408727 D 272560 CDS YP_108617.1 53719631 3091470 2410598..2411791 1 NC_006350.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 2411791 3091470 BPSL2019 Burkholderia pseudomallei K96243 trans-2-enoyl-CoA reductase YP_108617.1 2410598 D 272560 CDS YP_108618.1 53719632 3091471 2412415..2413602 1 NC_006350.1 Similar to Escherichia coli multidrug resistance protein K EmrK or b2368 SWALL:EMRK_ECOLI (SWALL:P52599) (387 aa) fasta scores: E(): 1.7e-18, 31.65% id in 357 aa, and to Rhizobium meliloti hypothetical protein rb1406 or smb20699 SWALL:Q92TT9 (EMBL:AL603647) (365 aa) fasta scores: E(): 5.4e-33, 38.71% id in 372 aa, and to Pseudomonas putida TrpB trpB SWALL:Q8RPR5 (EMBL:AF360362) (353 aa) fasta scores: E(): 3.2e-32, 38.75% id in 338 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; HlyD family secretion protein 2413602 3091471 BPSL2020 Burkholderia pseudomallei K96243 HlyD family secretion protein YP_108618.1 2412415 D 272560 CDS YP_108619.1 53719633 3094661 2413784..2415403 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 multidrug resistance protein B EmrB or b2686 or z3987 or ecs3548 SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 2.7e-61, 36.14% id in 509 aa, and to Chlorobium tepidum multidrug resistance protein ct0104 SWALL:AAM71352 (EMBL:AE012789) (533 aa) fasta scores: E(): 2e-66, 37.71% id in 533 aa; drug-resistance related membrane protein 2415403 3094661 BPSL2021 Burkholderia pseudomallei K96243 drug-resistance related membrane protein YP_108619.1 2413784 D 272560 CDS YP_108620.1 53719634 3094662 2415534..2417114 1 NC_006350.1 Similar to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 2.9e-27, 33.87% id in 496 aa, and to Ralstonia solanacearum probable channel-forming component of a multidrug resistance efflux pump protein rsp0442 or rs00901 SWALL:Q8XSM5 (EMBL:AL646078) (495 aa) fasta scores: E(): 2.8e-39, 37.09% id in 496 aa; drug-resistance related outer-membrane protein 2417114 3094662 BPSL2022 Burkholderia pseudomallei K96243 drug-resistance related outer-membrane protein YP_108620.1 2415534 D 272560 CDS YP_108621.1 53719635 3093363 complement(2417418..2418038) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 capsular synthesis regulator component B RcsB or b2217 or z3476 or ecs3106 SWALL:RCSB_ECOLI (SWALL:P14374) (216 aa) fasta scores: E(): 3.1e-21, 37.18% id in 199 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa3714 SWALL:Q9HXS7 (EMBL:AE004790) (213 aa) fasta scores: E(): 1.3e-26, 43.12% id in 211 aa; two component regulatory system response regulator 2418038 3093363 BPSL2024 Burkholderia pseudomallei K96243 two component regulatory system response regulator YP_108621.1 2417418 R 272560 CDS YP_108622.1 53719636 3093611 complement(2418051..2420132) 1 NC_006350.1 Similar to the C-terminal region of Escherichia coli sensor protein RcsC or b2218 SWALL:RCSC_ECOLI (SWALL:P14376) (949 aa) fasta scores: E(): 2e-37, 32.94% id in 513 aa, and of Salmonella typhi sensor protein RcsC or sty2496 SWALL:RCSC_SALTI (SWALL:Q56128) (948 aa) fasta scores: E(): 1.2e-35, 32.82% id in 521 aa; two component regulatory system sensor kinase 2420132 3093611 BPSL2025 Burkholderia pseudomallei K96243 two component regulatory system sensor kinase YP_108622.1 2418051 R 272560 CDS YP_108623.1 53719637 3093612 complement(2420543..2421508) 1 NC_006350.1 Similar to Acinetobacter baumannii hypothetical secreted protein CsuE SWALL:AAP43040 (EMBL:AY241696) (339 aa) fasta scores: E(): 1e-06, 31.08% id in 341 aa; lipoprotein 2421508 3093612 BPSL2026 Burkholderia pseudomallei K96243 lipoprotein YP_108623.1 2420543 R 272560 CDS YP_108624.1 53719638 3093013 complement(2421524..2423872) 1 NC_006350.1 Similar to Escherichia coli outer membrane usher protein precursor FocD SWALL:FOCD_ECOLI (SWALL:P46009) (875 aa) fasta scores: E(): 3.7e-11, 23.57% id in 755 aa, and to Vibrio parahaemolyticus CsuD SWALL:Q9AG84 (EMBL:AF339087) (802 aa) fasta scores: E(): 5.1e-86, 35.48% id in 789 aa; fimbriae-like protein 2423872 3093013 BPSL2027 Burkholderia pseudomallei K96243 fimbriae-like protein YP_108624.1 2421524 R 272560 CDS YP_108625.1 53719639 3093014 complement(2423980..2424819) 1 NC_006350.1 Similar to Yersinia pestis chaperone protein ypo1697 SWALL:Q8ZFK6 (EMBL:AJ414150) (250 aa) fasta scores: E(): 1.8e-33, 46.08% id in 230 aa, and to Xanthomonas campestris pili assembly chaperone EcpD or xcc1380 SWALL:AAM40678 (EMBL:AE012237) (251 aa) fasta scores: E(): 1.6e-11, 32.31% id in 263 aa; fimbriae-assembly chaperone 2424819 3093014 BPSL2028 Burkholderia pseudomallei K96243 fimbriae-assembly chaperone YP_108625.1 2423980 R 272560 CDS YP_108626.1 53719640 3093364 complement(2424837..2425361) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4648 SWALL:Q9HVE4 (EMBL:AE004879) (182 aa) fasta scores: E(): 5.7e-10, 36.93% id in 176 aa, and to Vibrio parahaemolyticus CsuA SWALL:Q9AG87 (EMBL:AF339087) (181 aa) fasta scores: E(): 4.2e-07, 32.36% id in 173 aa. Note: Also similar to the upstream CDS BPSL2030 (187 aa) fasta scores: E(): 1.5e-09, 43.949% identity in 157 aa overlap; hypothetical protein 2425361 3093364 BPSL2029 Burkholderia pseudomallei K96243 hypothetical protein YP_108626.1 2424837 R 272560 CDS YP_108627.1 53719641 3093365 complement(2425438..2425998) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4648 SWALL:Q9HVE4 (EMBL:AE004879) (182 aa) fasta scores: E(): 9.2e-10, 34.46% id in 177 aa, and to Vibrio parahaemolyticus CsuA SWALL:Q9AG87 (EMBL:AF339087) (181 aa) fasta scores: E(): 5.2e-09, 30.17% id in 169 aa. Note: Also smilar to BPSL2031 (200 aa) fasta scores: E(): 1.3e-13, 37.576% identity in 165 aa overlap and to BPSL2029 (175 aa) fasta scores: E(): 3.9e-11, 43.949% identity in 157 aa overlap; hypothetical protein 2425998 3093365 BPSL2030 Burkholderia pseudomallei K96243 hypothetical protein YP_108627.1 2425438 R 272560 CDS YP_108628.1 53719642 3092962 complement(2426051..2426596) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4648 SWALL:Q9HVE4 (EMBL:AE004879) (182 aa) fasta scores: E(): 1.7e-07, 30.22% id in 182 aa, and to Yersinia pestis exported protein ypo1699 SWALL:Q8ZFK4 (EMBL:AJ414150) (176 aa) fasta scores: E(): 1.7e-06, 30.4% id in 171 aa. Note: Also similar to BPSL2030 (187 aa) fasta scores: E(): 6.4e-14, 37.576% identity in 165 aa overlap and to BPSL2029 (175 aa) fasta scores: E(): 2.6e-05, 34.118% identity in 170 aa overlap; hypothetical protein 2426596 3092962 BPSL2031 Burkholderia pseudomallei K96243 hypothetical protein YP_108628.1 2426051 R 272560 CDS YP_108629.1 53719643 3092963 complement(2427413..2428306) 1 NC_006350.1 Similar to Bacillus subtilis als operon regulatory protein AlsR SWALL:ALSR_BACSU (SWALL:Q04778) (302 aa) fasta scores: E(): 1.2e-22, 31.63% id in 294 aa, and to Rhizobium meliloti transcriptional regulator protein rb0012 or smb20009 SWALL:Q92XF0 (EMBL:AL603642) (309 aa) fasta scores: E(): 3.5e-38, 44.21% id in 285 aa; LysR family transcriptional regulator 2428306 3092963 BPSL2032 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108629.1 2427413 R 272560 CDS YP_108630.1 53719644 3092589 2428723..2430009 1 NC_006350.1 Similar to Alcaligenes eutrophus probable 4-methylmuconolactone transporter MmlH SWALL:MMLH_ALCEU (SWALL:O51798) (428 aa) fasta scores: E(): 5.4e-40, 43.51% id in 416 aa, and to Ralstonia solanacearum probable metabolite transport transmembrane protein rsp0234 or rs05189 SWALL:Q8XT81 (EMBL:AL646077) (416 aa) fasta scores: E(): 1.7e-106, 66.26% id in 412 aa; transport-related membrane protein 2430009 3092589 BPSL2033 Burkholderia pseudomallei K96243 transport-related membrane protein YP_108630.1 2428723 D 272560 CDS YP_108631.1 53719645 3092590 2430054..2431037 1 NC_006350.1 Similar to Ralstonia solanacearum probable hydrolase transmembrane protein rsp0233 or rs05190 SWALL:Q8XT82 (EMBL:AL646077) (302 aa) fasta scores: E(): 1.6e-52, 50.55% id in 269 aa, and to Campylobacter jejuni hypothetical protein cj0556 SWALL:Q9PHV9 (EMBL:AL139075) (265 aa) fasta scores: E(): 4.1e-24, 30.48% id in 269 aa; hydrolase 2431037 3092590 BPSL2034 Burkholderia pseudomallei K96243 hydrolase YP_108631.1 2430054 D 272560 CDS YP_108632.1 53719646 3092674 2431505..2431786 1 NC_006350.1 Similar to the plasmid borne Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 6.6e-11, 45.26% id in 95 aa, and to Ralstonia solanacearum HNS-like transcription regulator protein rsp0335 or rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 1.7e-10, 42.42% id in 99 aa; regulatory protein 2431786 3092674 BPSL2035 Burkholderia pseudomallei K96243 regulatory protein YP_108632.1 2431505 D 272560 CDS YP_108633.1 53719647 3092675 complement(2432049..2432318) 1 NC_006350.1 hypothetical protein 2432318 3092675 BPSL2036 Burkholderia pseudomallei K96243 hypothetical protein YP_108633.1 2432049 R 272560 CDS YP_108634.1 53719648 3093746 2432687..2432866 1 NC_006350.1 hypothetical protein 2432866 3093746 BPSL2037 Burkholderia pseudomallei K96243 hypothetical protein YP_108634.1 2432687 D 272560 CDS YP_108635.1 53719649 3093747 complement(2433790..2434656) 1 NC_006350.1 hypothetical protein 2434656 3093747 BPSL2038 Burkholderia pseudomallei K96243 hypothetical protein YP_108635.1 2433790 R 272560 CDS YP_108636.1 53719650 3092997 complement(2434826..2437660) 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsp0752 or rs01956 SWALL:Q8XRS9 (EMBL:AL646080) (925 aa) fasta scores: E(): 4.2e-08, 21.03% id in 989 aa; hypothetical protein 2437660 3092997 BPSL2039 Burkholderia pseudomallei K96243 hypothetical protein YP_108636.1 2434826 R 272560 CDS YP_108637.1 53719651 3092998 complement(2437681..2438556) 1 NC_006350.1 hypothetical protein 2438556 3092998 BPSL2040 Burkholderia pseudomallei K96243 hypothetical protein YP_108637.1 2437681 R 272560 CDS YP_108638.1 53719652 3094115 complement(2438558..2441398) 1 NC_006350.1 Similar to Salmonella enterica subsp. enterica serovar Typhimurium VrgS protein SWALL:Q93IR3 (EMBL:AJ320483) (729 aa) fasta scores: E(): 1.8e-11, 26.08% id in 552 aa, and to Ralstonia solanacearum VGR-related protein rsp0750 or rs01958 SWALL:Q8XRT1 (EMBL:AL646080) (918 aa) fasta scores: E(): 1.4e-57, 40.27% id in 961 aa. Note: Also similar to BPSL2050 (933 aa) fasta scores: E(): 3.5e-32, 30.665% identity in 962 aa overlap; hypothetical protein 2441398 3094115 BPSL2041 Burkholderia pseudomallei K96243 hypothetical protein YP_108638.1 2438558 R 272560 CDS YP_108639.1 53719653 3094116 complement(2441411..2441716) 1 NC_006350.1 Low similarity to Escherichia coli, and Escherichia coli O157:H7 cell division protein FtsL or MraR or b0083 or z0093 or ecs0087 SWALL:FTSL_ECOLI (SWALL:P22187) (121 aa) fasta scores: E(): 0.89, 33.33% id in 93 aa; hypothetical protein 2441716 3094116 BPSL2042 Burkholderia pseudomallei K96243 hypothetical protein YP_108639.1 2441411 R 272560 CDS YP_108640.1 53719654 3091490 complement(2441735..2441998) 1 NC_006350.1 hypothetical protein 2441998 3091490 BPSL2042A Burkholderia pseudomallei K96243 hypothetical protein YP_108640.1 2441735 R 272560 CDS YP_108641.1 53719655 3091491 complement(2442210..2442749) 1 NC_006350.1 lipoprotein 2442749 3091491 BPSL2043 Burkholderia pseudomallei K96243 lipoprotein YP_108641.1 2442210 R 272560 CDS YP_108642.1 53719656 3093028 complement(2442840..2443061) 1 NC_006350.1 hypothetical protein 2443061 3093028 BPSL2044 Burkholderia pseudomallei K96243 hypothetical protein YP_108642.1 2442840 R 272560 CDS YP_108643.1 53719657 3093029 complement(2443066..2443557) 1 NC_006350.1 lipoprotein 2443557 3093029 BPSL2045 Burkholderia pseudomallei K96243 lipoprotein YP_108643.1 2443066 R 272560 CDS YP_108644.1 53719658 3092585 complement(2443535..2446870) 1 NC_006350.1 Similar to Ralstonia solanacearum VGR-related protein rsp0738 or rs01970 SWALL:Q8XRU3 (EMBL:AL646080) (898 aa) fasta scores: E(): 4.6e-55, 40.98% id in 893 aa, and to Pseudomonas aeruginosa hypothetical protein pa5090 SWALL:Q9HU93 (EMBL:AE004921) (790 aa) fasta scores: E(): 2.3e-15, 25.98% id in 812 aa; hypothetical protein 2446870 3092585 BPSL2046 Burkholderia pseudomallei K96243 hypothetical protein YP_108644.1 2443535 R 272560 CDS YP_108645.1 53719659 3092586 complement(2446979..2449387) 1 NC_006350.1 Similar to the N-terminal region of Ralstonia solanacearum hypothetical protein rsp0177 or rs04689 SWALL:Q8XTD6 (EMBL:AL646077) (740 aa) fasta scores: E(): 8.9e-16, 38.02% id in 760 aa; hypothetical protein 2449387 3092586 BPSL2047 Burkholderia pseudomallei K96243 hypothetical protein YP_108645.1 2446979 R 272560 CDS YP_108646.1 53719660 3092178 complement(2449384..2449977) 1 NC_006350.1 Similar to Pseudomonas sp. CA10 hypothetical 18.9 kDa protein SWALL:Q9AQM6 (EMBL:AB047548) (170 aa) fasta scores: E(): 2.1e-11, 35.92% id in 167 aa; hypothetical protein 2449977 3092178 BPSL2048 Burkholderia pseudomallei K96243 hypothetical protein YP_108646.1 2449384 R 272560 CDS YP_108647.1 53719661 3092179 complement(2449974..2450531) 1 NC_006350.1 Similar to Pseudomonas sp. CA10 hypothetical 18.9 kDa protein SWALL:Q9AQM6 (EMBL:AB047548) (170 aa) fasta scores: E(): 4.1e-08, 31.88% id in 138 aa; hypothetical protein 2450531 3092179 BPSL2048A Burkholderia pseudomallei K96243 hypothetical protein YP_108647.1 2449974 R 272560 CDS YP_108648.1 53719662 3093281 complement(2450668..2451501) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0176 rsp0176 or rs06148 SWALL:Q8XTD7 (EMBL:AL646077) (278 aa) fasta scores: E(): 5.8e-23, 38.8% id in 268 aa; hypothetical protein 2451501 3093281 BPSL2049 Burkholderia pseudomallei K96243 hypothetical protein YP_108648.1 2450668 R 272560 CDS YP_108649.1 53719663 3093282 complement(2451504..2454302) 1 NC_006350.1 Similar to Ralstonia solanacearum VGR-related protein rsp0750 or rs01958 SWALL:Q8XRT1 (EMBL:AL646080) (918 aa) fasta scores: E(): 1.7e-37, 30.16% id in 968 aa, and to Pseudomonas aeruginosa hypothetical protein pa0262 SWALL:Q9I6M7 (EMBL:AE004464) (1019 aa) fasta scores: E(): 3.9e-07, 26.49% id in 902 aa. Note: Also similar to BPSL2041 (947 aa) fasta scores: E(): 1.1e-34, 30.489% identity in 961 aa overlap; hypothetical protein 2454302 3093282 BPSL2050 Burkholderia pseudomallei K96243 hypothetical protein YP_108649.1 2451504 R 272560 CDS YP_108650.1 53719664 3093693 2454823..2455089 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0765 or rs01943 SWALL:Q8XRR6 (EMBL:AL646080) (89 aa) fasta scores: E(): 2e-13, 52.87% id in 87 aa, and to the N-terminal region of Burkholderia thailandensis gp29 SWALL:Q8VP97 (EMBL:AY063741) (186 aa) fasta scores: E(): 3.1e-07, 42.16% id in 83 aa; hypothetical protein 2455089 3093693 BPSL2051 Burkholderia pseudomallei K96243 hypothetical protein YP_108650.1 2454823 D 272560 CDS YP_108651.1 53719665 3093694 2455086..2456528 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0764 or rs01944 SWALL:Q8XRR7 (EMBL:AL646080) (495 aa) fasta scores: E(): 1.4e-18, 33.26% id in 487 aa; hypothetical protein 2456528 3093694 BPSL2052 Burkholderia pseudomallei K96243 hypothetical protein YP_108651.1 2455086 D 272560 CDS YP_108652.1 53719666 3092313 complement(2456556..2458406) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0747 or rs01961 SWALL:Q8XRT4 (EMBL:AL646080) (616 aa) fasta scores: E(): 4.6e-108, 47.43% id in 624 aa, and to Escherichia coli O157:H7 hypothetical protein z0260 or ecs0229 SWALL:Q8X7U6 (EMBL:AE005198) (616 aa) fasta scores: E(): 1e-25, 25.39% id in 626 aa; hypothetical protein 2458406 3092313 BPSL2053 Burkholderia pseudomallei K96243 hypothetical protein YP_108652.1 2456556 R 272560 CDS YP_108653.1 53719667 3092314 complement(2458817..2459293) 1 NC_006350.1 hypothetical protein 2459293 3092314 BPSL2054 Burkholderia pseudomallei K96243 hypothetical protein YP_108653.1 2458817 R 272560 CDS YP_108654.1 53719668 3092165 complement(2459672..2460508) 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein mll0618 SWALL:Q98ME0 (EMBL:AP002995) (284 aa) fasta scores: E(): 4.1e-18, 33.68% id in 288 aa, and to Deinococcus radiodurans hypothetical protein dra0340 SWALL:Q9RYH3 (EMBL:AE001863) (276 aa) fasta scores: E(): 1.3e-17, 35.76% id in 274 aa; hypothetical protein 2460508 3092165 BPSL2055 Burkholderia pseudomallei K96243 hypothetical protein YP_108654.1 2459672 R 272560 CDS YP_108655.1 53719669 3092166 2460880..2463447 1 NC_006350.1 C-terminal region similar to C-terminal region of Dactylium dendroides galactose oxidase precursor GaoA SWALL:GAOA_DACDE (SWALL:Q01745) (680 aa) fasta scores: E(): 5.7e-72, 44.69% id in 490 aa; oxidase 2463447 3092166 BPSL2056 Burkholderia pseudomallei K96243 oxidase YP_108655.1 2460880 D 272560 CDS YP_108656.1 53719670 3092550 2463474..2463962 1 NC_006350.1 hypothetical protein 2463962 3092550 BPSL2057 Burkholderia pseudomallei K96243 hypothetical protein YP_108656.1 2463474 D 272560 CDS YP_108657.1 53719671 3092551 2463997..2464557 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc2292 or rs01263 SWALL:Q8XX26 (EMBL:AL646069) (207 aa) fasta scores: E(): 1.3e-05, 27.89% id in 190 aa; hypothetical protein 2464557 3092551 BPSL2058 Burkholderia pseudomallei K96243 hypothetical protein YP_108657.1 2463997 D 272560 CDS YP_108658.1 53719672 3091786 2464603..2464836 1 NC_006350.1 hypothetical protein 2464836 3091786 BPSL2059 Burkholderia pseudomallei K96243 hypothetical protein YP_108658.1 2464603 D 272560 CDS YP_108659.1 53719673 3091787 complement(2465295..2465639) 1 NC_006350.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0335 or rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 9.1e-05, 36.55% id in 93 aa; hypothetical protein 2465639 3091787 BPSL2060 Burkholderia pseudomallei K96243 hypothetical protein YP_108659.1 2465295 R 272560 CDS YP_108660.1 53719674 3094074 complement(2465656..2467185) 1 NC_006350.1 Similar to the C-terminal region of Caulobacter crescentus FlbA protein or cc1457 SWALL:FLBA_CAUCR (SWALL:P21296) (596 aa) fasta scores: E(): 3.1e-20, 30.36% id in 494 aa, and to Ralstonia solanacearum hypothetical protein rsc3164 rsc3164 or rs00434 SWALL:Q8XUM3 (EMBL:AL646074) (387 aa) fasta scores: E(): 5.2e-11, 34.16% id in 322 aa; hypothetical protein 2467185 3094074 BPSL2061 Burkholderia pseudomallei K96243 hypothetical protein YP_108660.1 2465656 R 272560 CDS YP_108661.1 53719675 3094075 complement(2467187..2467897) 1 NC_006350.1 Similar to Escherichia vulneris outer membrane protein II OmpA SWALL:Q47880 (EMBL:M63350) (244 aa) fasta scores: E(): 1.3e-14, 35% id in 220 aa. C-terminal region is similar to the C-terminus of Klebsiella pneumoniae outer membrane protein a precursor OmpA SWALL:OMPA_KLEPN (SWALL:P24017) (344 aa) fasta scores: E(): 1.3e-15, 38.69% id in 199 aa; OmpA family protein 2467897 3094075 BPSL2062 Burkholderia pseudomallei K96243 OmpA family protein YP_108661.1 2467187 R 272560 CDS YP_108662.1 53719676 3093202 complement(2467978..2471250) 1 NC_006350.1 Weakly similar to Rhizobium meliloti hypothetical protein r00458 r00458 or smc01708 SWALL:Q92KQ7 (EMBL:AL591783) (1291 aa) fasta scores: E(): 4.5e-25, 29.01% id in 1282 aa, and to and internal region of Rhizobium loti hypothetical protein Mll2848 mll2848 SWALL:Q98HJ2 (EMBL:AP003000) (1953 aa) fasta scores: E(): 6.9e-31, 31.24% id in 1258 aa; hypothetical protein 2471250 3093202 BPSL2063 Burkholderia pseudomallei K96243 hypothetical protein YP_108662.1 2467978 R 272560 CDS YP_108663.1 53719677 3093203 complement(2471336..2471470) 1 NC_006350.1 hypothetical protein 2471470 3093203 BPSL2064 Burkholderia pseudomallei K96243 hypothetical protein YP_108663.1 2471336 R 272560 CDS YP_108664.1 53719678 3093071 complement(2471650..2472360) 1 NC_006350.1 Similar to Bacillus subtilis alkaline phosphatase synthesis transcriptional regulatory protein PhoP SWALL:PHOP_BACSU (SWALL:P13792) (240 aa) fasta scores: E(): 2.7e-21, 34.91% id in 232 aa, and to Ralstonia solanacearum probable two-component system response regulator transcription regulator protein rsc1073 or rs04004 SWALL:Q8Y0H1 (EMBL:AL646062) (237 aa) fasta scores: E(): 4.6e-29, 39.91% id in 228 aa; two component system response regulator 2472360 3093071 BPSL2065 Burkholderia pseudomallei K96243 two component system response regulator YP_108664.1 2471650 R 272560 CDS YP_108665.1 53719679 3093072 complement(2473336..2473707) 1 NC_006350.1 Similar to Salmonella typhimurium LT2 fels-1 prophage hypothetical protein stm0905 SWALL:Q8ZQH6 (EMBL:AE008737) (132 aa) fasta scores: E(): 1.4e-23, 54.16% id in 120 aa, and to Escherichia coli hypothetical protein precursor YcgJ or b1177 SWALL:YCGJ_ECOLI (SWALL:P76001) (122 aa) fasta scores: E(): 2.2e-19, 49.55% id in 113 aa; hypothetical protein 2473707 3093072 BPSL2066 Burkholderia pseudomallei K96243 hypothetical protein YP_108665.1 2473336 R 272560 CDS YP_108666.1 53719680 3093709 complement(2473718..2473933) 1 NC_006350.1 hypothetical protein 2473933 3093709 BPSL2067 Burkholderia pseudomallei K96243 hypothetical protein YP_108666.1 2473718 R 272560 CDS YP_108667.1 53719681 3093710 complement(2474112..2474894) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 phosphate regulon transcriptional regulatory protein PhoB or b0399 or z0497 or ecs0449 SWALL:PHOB_ECOLI (SWALL:P08402) (229 aa) fasta scores: E(): 6.6e-19, 31.41% id in 226 aa, and to Ralstonia solanacearum probable two-component system response regulator transcription regulator protein rsc1073 or rs04004 SWALL:Q8Y0H1 (EMBL:AL646062) (237 aa) fasta scores: E(): 4.2e-24, 34.97% id in 223 aa. Note: Also similar to the downstream CDS BPSL2065 (237 aa) fasta scores: E(): 7.1e-34, 45.455% identity in 231 aa overlap; two component system response regulator 2474894 3093710 BPSL2068 Burkholderia pseudomallei K96243 two component system response regulator YP_108667.1 2474112 R 272560 CDS YP_108668.1 53719682 3093695 complement(2475308..2476240) 1 NC_006350.1 Similar to Escherichia coli transcriptional regulator AbgR or b1339 SWALL:ABGR_ECOLI (SWALL:P77744) (302 aa) fasta scores: E(): 6.1e-13, 24.73% id in 287 aa, and to Xanthomonas axonopodis transcriptional regulator YbhD or xac3476 SWALL:Q8PGY6 (EMBL:AE011995) (300 aa) fasta scores: E(): 2.8e-19, 32.46% id in 308 aa; LysR family transcriptional regulator 2476240 3093695 BPSL2069 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108668.1 2475308 R 272560 CDS YP_108669.1 53719683 3093696 complement(2476552..2477943) 1 NC_006350.1 hypothetical protein 2477943 3093696 BPSL2070 Burkholderia pseudomallei K96243 hypothetical protein YP_108669.1 2476552 R 272560 CDS YP_108670.1 53719684 3093533 complement(2478691..2478885) 1 NC_006350.1 hypothetical protein 2478885 3093533 BPSL2071 Burkholderia pseudomallei K96243 hypothetical protein YP_108670.1 2478691 R 272560 CDS YP_108671.1 53719685 3093534 2479571..2479789 1 NC_006350.1 hypothetical protein 2479789 3093534 BPSL2072 Burkholderia pseudomallei K96243 hypothetical protein YP_108671.1 2479571 D 272560 CDS YP_108672.1 53719686 3093222 2480505..2481983 1 NC_006350.1 Similar to Alcaligenes faecalis PolY poly(3-hydroxybutyrate) depolymerase precursor (EC 3.1.1.75) (PHB depolymerase) SWALL:PHB_ALCFA (SWALL:P12625) (488 aa) fasta scores: E(): 5.8e-152, 80.28% id in 487 aa, and to Burkholderia pickettii PolY SWALL:Q9XDX7 (EMBL:AB022287) (492 aa) fasta scores: E(): 5.8e-152, 81.19% id in 484 aa; poly(3-hydroxybutyrate) depolymerase 2481983 phaZ 3093222 phaZ Burkholderia pseudomallei K96243 poly(3-hydroxybutyrate) depolymerase YP_108672.1 2480505 D 272560 CDS YP_108673.1 53719687 3094840 2482438..2485884 1 NC_006350.1 Similar to the full length of Ralstonia solanacearum alpha-amylase-related protein rsp0241 or rs05182 SWALL:Q8XT74 (EMBL:AL646077) (1201 aa) fasta scores: E(): 4.5e-145, 51.26% id in 1151 aa, and C-terminal region to Chlorobium tepidum alpha-amylase ct2089 SWALL:AAM73306 (EMBL:AE012958) (670 aa) fasta scores: E(): 2.7e-102, 44.68% id in 658 aa; alpha-amylase-like protein 2485884 3094840 BPSL2074 Burkholderia pseudomallei K96243 alpha-amylase-like protein YP_108673.1 2482438 D 272560 CDS YP_108674.1 53719688 3094841 2485881..2489276 1 NC_006350.1 Similar to Thermus thermophilus trehalose synthase TreS SWALL:TRES_THETH (SWALL:O06458) (963 aa) fasta scores: E(): 2.6e-123, 49.86% id in 736 aa, and to Pseudomonas aeruginosa probable trehalose synthase pa2152 SWALL:Q9I1W3 (EMBL:AE004642) (1100 aa) fasta scores: E(): 0, 59.06% id in 1114 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; trehalose synthase 2489276 3094841 BPSL2075 Burkholderia pseudomallei K96243 trehalose synthase YP_108674.1 2485881 D 272560 CDS YP_108675.1 53719689 3092569 2489273..2491489 1 NC_006350.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 2491489 glgB 3092569 glgB Burkholderia pseudomallei K96243 glycogen branching enzyme YP_108675.1 2489273 D 272560 CDS YP_108676.1 53719690 3094846 2491542..2493650 1 NC_006350.1 Similar to Escherichia coli glycogen operon protein GlgX or GlyX or b3431 SWALL:GLGX_ECOLI (SWALL:P15067) (657 aa) fasta scores: E(): 1.8e-99, 46.11% id in 657 aa, and to Ralstonia solanacearum probable glycogen operon protein rsp0238 or rs05185 SWALL:Q8XT77 (EMBL:AL646077) (754 aa) fasta scores: E(): 6.3e-199, 65.58% id in 709 aa, and to; glycogen operon-like protein 2493650 3094846 BPSL2077 Burkholderia pseudomallei K96243 glycogen operon-like protein YP_108676.1 2491542 D 272560 CDS YP_108677.1 53719691 3094847 2493677..2495581 1 NC_006350.1 Similar to Rhizobium sp. malto-oligosyltrehalose trehalohydrolase TreZ SWALL:TREZ_RHISP (SWALL:Q53238) (596 aa) fasta scores: E(): 2.9e-35, 40.48% id in 573 aa, and to Ralstonia solanacearum maltooligosyl trehalose trehalohydrolase rsp0237 or rs05186 SWALL:Q8XT78 (EMBL:AL646077) (622 aa) fasta scores: E(): 6.4e-131, 60% id in 620 aa; trehalose trehalohydrolase 2495581 3094847 BPSL2078 Burkholderia pseudomallei K96243 trehalose trehalohydrolase YP_108677.1 2493677 D 272560 CDS YP_108678.1 53719692 3091923 2495578..2497800 1 NC_006350.1 Similar to Escherichia coli 4-alpha-glucanotransferase MalQ or MalA or b3416 SWALL:MALQ_ECOLI (SWALL:P15977) (694 aa) fasta scores: E(): 8.2e-51, 31.39% id in 739 aa, and to Ralstonia solanacearum 4-alpha-glucanotransferase rsp0236 or rs05187 SWALL:Q8XT79 (EMBL:AL646077) (774 aa) fasta scores: E(): 1.3e-81, 47.12% id in 783 aa; glucanotransferase 2497800 3091923 BPSL2079 Burkholderia pseudomallei K96243 glucanotransferase YP_108678.1 2495578 D 272560 CDS YP_108679.1 53719693 3091924 2497797..2500589 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable glycosyl hydrolase pa2162 SWALL:Q9I1V3 (EMBL:AE004643) (926 aa) fasta scores: E(): 7.5e-143, 47.62% id in 947 aa, and to Salmonella typhimurium glycosyl hydrolase stm1559 SWALL:Q8ZPF1 (EMBL:AE008768) (842 aa) fasta scores: E(): 2.1e-23, 36.76% id in 914 aa; glycosyl hydrolase 2500589 3091924 BPSL2080 Burkholderia pseudomallei K96243 glycosyl hydrolase YP_108679.1 2497797 D 272560 CDS YP_108680.1 53719694 3094877 complement(2500774..2501262) 1 NC_006350.1 Similar in its C-terminal region to the C-terminal region in Xylella fastidiosa tryptophan repressor binding protein xf1133 SWALL:Q9PE95 (EMBL:AE003949) (189 aa) fasta scores: E(): 2.1e-16, 52.83% id in 106 aa, and also in Escherichia coli hypothetical 19.6 kDa protein SWALL:Q9F7X7 (EMBL:AF270497) (183 aa) fasta scores: E(): 7.5e-09, 40% id in 105 aa; hypothetical protein 2501262 3094877 BPSL2081 Burkholderia pseudomallei K96243 hypothetical protein YP_108680.1 2500774 R 272560 CDS YP_108681.1 53719695 3094878 complement(2501376..2501753) 1 NC_006350.1 Similar to Caulobacter crescentus hypothetical protein cc2974 SWALL:Q9A469 (EMBL:AE005961) (123 aa) fasta scores: E(): 8.2e-11, 36.6% id in 112 aa; hypothetical protein 2501753 3094878 BPSL2082 Burkholderia pseudomallei K96243 hypothetical protein YP_108681.1 2501376 R 272560 CDS YP_108682.1 53719696 3091569 2501976..2503436 1 NC_006350.1 Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 6.5e-50, 36.92% id in 474 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc3119 or rs00574 SWALL:Q8XUR6 (EMBL:AL646073) (488 aa) fasta scores: E(): 2.6e-47, 40.55% id in 466 aa; GntR family transcriptional regulator 2503436 3091569 BPSL2083 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_108682.1 2501976 D 272560 CDS YP_108683.1 53719697 3091570 complement(2503503..2505482) 1 NC_006350.1 N-terminal region similar to Bradyrhizobium sp. nodulation protein NolA SWALL:NOLA_BRASN (SWALL:P50330) (237 aa) fasta scores: E(): 1e-11, 31.78% id in 236 aa, and C-terminal region similar to Rhizobium loti hypothetical protein mlr0915 SWALL:Q98LR1 (EMBL:AP002996) (299 aa) fasta scores: E(): 6.8e-31, 41.69% id in 271 aa. Note: There is a region of approx. 100 residues in between these two regions of similarity that presents no matches to the databases entries. Possible fusion protein; hypothetical protein 2505482 3091570 BPSL2084 Burkholderia pseudomallei K96243 hypothetical protein YP_108683.1 2503503 R 272560 CDS YP_108684.1 53719698 3093762 2506560..2507069 1 NC_006350.1 hypothetical protein 2507069 3093762 BPSL2086 Burkholderia pseudomallei K96243 hypothetical protein YP_108684.1 2506560 D 272560 CDS YP_108685.1 53719699 3094425 2507411..2508013 1 NC_006350.1 Very low and partial similarity to Pseudomonas aeruginosa hypothetical protein pa3907 SWALL:Q9HXA6 (EMBL:AE004808) (261 aa) fasta scores: E(): 0.00015, 30.87% id in 149 aa; hypothetical protein 2508013 3094425 BPSL2087A Burkholderia pseudomallei K96243 hypothetical protein YP_108685.1 2507411 D 272560 CDS YP_108686.1 53719700 3094426 2508020..2508742 1 NC_006350.1 Very low and partial similarity to Pseudomonas aeruginosa hypothetical protein pa3908 SWALL:Q9HXA5 (EMBL:AE004808) (239 aa) fasta scores: E(): 0.001, 25.43% id in 228 aa; hypothetical protein 2508742 3094426 BPSL2088 Burkholderia pseudomallei K96243 hypothetical protein YP_108686.1 2508020 D 272560 CDS YP_108687.1 53719701 3093960 2509753..2510595 1 NC_006350.1 Similar to Ralstonia solanacearum phytoene synthase crtb or rsc1652 or rs04029 SWALL:Q8XYV4 (EMBL:AL646065) (290 aa) fasta scores: E(): 3.7e-43, 47.65% id in 277 aa, and to Neisseria meningitidis poly-isoprenyl transferase nma1339 SWALL:Q9JUF5 (EMBL:AL162755) (290 aa) fasta scores: E(): 7.4e-27, 35.53% id in 273 aa; transferase 2510595 3093960 BPSL2090 Burkholderia pseudomallei K96243 transferase YP_108687.1 2509753 D 272560 CDS YP_108688.1 53719702 3093961 complement(2510636..2511892) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1651 or rs04028 SWALL:Q8XYV5 (EMBL:AL646065) (394 aa) fasta scores: E(): 7e-83, 56.45% id in 418 aa, and to Caulobacter crescentus hypothetical protein cc1979 SWALL:Q9A6V4 (EMBL:AE005871) (407 aa) fasta scores: E(): 3.5e-23, 31.48% id in 432 aa; hypothetical protein 2511892 3093961 BPSL2091 Burkholderia pseudomallei K96243 hypothetical protein YP_108688.1 2510636 R 272560 CDS YP_108689.1 53719703 3093083 complement(2511975..2513390) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsc1650 or rs04027 SWALL:Q8XYV6 (EMBL:AL646065) (538 aa) fasta scores: E(): 1.1e-84, 51.62% id in 492 aa, and to Xanthomonas campestris hypothetical protein xcc3941 SWALL:AAM43162 (EMBL:AE012514) (529 aa) fasta scores: E(): 8e-11, 32.78% id in 427 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; hypothetical protein 2513390 3093083 BPSL2092 Burkholderia pseudomallei K96243 hypothetical protein YP_108689.1 2511975 R 272560 CDS YP_108690.1 53719704 3093084 complement(2513634..2513972) 1 NC_006350.1 hypothetical protein 2513972 3093084 BPSL2093 Burkholderia pseudomallei K96243 hypothetical protein YP_108690.1 2513634 R 272560 CDS YP_108691.1 53719705 3094372 2514194..2514919 1 NC_006350.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 2514919 ompR 3094372 ompR Burkholderia pseudomallei K96243 osmolarity response regulator YP_108691.1 2514194 D 272560 CDS YP_108692.1 53719706 3093607 2514986..2516344 1 NC_006350.1 Similar to Escherichia coli osmolarity sensor protein EnvZ or OmpB or PerA or Tpo or b3404 SWALL:ENVZ_ECOLI (SWALL:P02933) (450 aa) fasta scores: E(): 7.8e-31, 32.3% id in 452 aa, and to Ralstonia solanacearum probable oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein RisS or rsc1647 or rs04023 SWALL:Q8XYV9 (EMBL:AL646065) (453 aa) fasta scores: E(): 9.1e-95, 57.53% id in 438 aa; oxidative stress related two component system, sensor kinase 2516344 3093607 BPSL2095 Burkholderia pseudomallei K96243 oxidative stress related two component system, sensor kinase YP_108692.1 2514986 D 272560 CDS YP_108693.1 53719707 3093608 2516543..2517091 1 NC_006350.1 Similar to Brucella melitensis alkyl hydroperoxide reductase C22 protein bmeii0577 SWALL:Q8YCF3 (EMBL:AE009694) (184 aa) fasta scores: E(): 6.4e-53, 70.33% id in 182 aa, and to Streptomyces viridosporus alkyl hydroperoxide reductase AhpC SWALL:Q9X5V0 (EMBL:AF127576) (194 aa) fasta scores: E(): 1.2e-30, 50.55% id in 180 aa; hydroperoxide reductase 2517091 3093608 BPSL2096 Burkholderia pseudomallei K96243 hydroperoxide reductase YP_108693.1 2516543 D 272560 CDS YP_108694.1 53719708 3093476 2517169..2517696 1 NC_006350.1 Similar to Ralstonia solanacearum antioxidant protein rsc1645 or rs04020 SWALL:Q8XYW1 (EMBL:AL646065) (175 aa) fasta scores: E(): 7.9e-49, 76.87% id in 173 aa, and to Mycobacterium tuberculosis, and Mycobacterium bovis AhpD protein or rv2429 or mt2504 or mtcy428.17C SWALL:AHPD_MYCTU (SWALL:Q57353) (177 aa) fasta scores: E(): 1.6e-11, 37.93% id in 174 aa; hypothetical protein 2517696 3093476 BPSL2097 Burkholderia pseudomallei K96243 hypothetical protein YP_108694.1 2517169 D 272560 CDS YP_108695.1 53719709 3092071 complement(2518066..2518554) 1 NC_006350.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2518554 ispF 3092071 ispF Burkholderia pseudomallei K96243 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_108695.1 2518066 R 272560 CDS YP_108696.1 53719710 3092513 complement(2518595..2519305) 1 NC_006350.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2519305 ispD 3092513 ispD Burkholderia pseudomallei K96243 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_108696.1 2518595 R 272560 CDS YP_108697.1 53719711 3093860 2519326..2522895 1 NC_006350.1 Similar to Escherichia coli transcription-repair coupling factor Mfd or b1114 SWALL:MFD_ECOLI (SWALL:P30958) (1148 aa) fasta scores: E(): 4.3e-213, 51.04% id in 1152 aa, and to Ralstonia solanacearum probable transcription-repair coupling factor protein rsc1642 or rs04017 SWALL:Q8XYW4 (EMBL:AL646065) (1157 aa) fasta scores: E(): 0, 74.78% id in 1150 aa. Note: This CDS is longer in its N-terminal region than most of its database matches and has two possible alternative start codons at residues 15 and 33; transcription-repair coupling factor 2522895 mfd 3093860 mfd Burkholderia pseudomallei K96243 transcription-repair coupling factor YP_108697.1 2519326 D 272560 CDS YP_008992008.1 568335728 18093824 2523640..2524044 1 NC_006350.1 oxidoreductase; hypothetical protein 2524044 18093824 BPSL2100b Burkholderia pseudomallei K96243 hypothetical protein YP_008992008.1 2523640 D 272560 CDS YP_108698.2 161723201 3093477 2524088..2525305 1 NC_006350.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 2525305 3093477 BPSL2101 Burkholderia pseudomallei K96243 acetylornithine deacetylase YP_108698.2 2524088 D 272560 CDS YP_108699.1 53719713 3094380 2525367..2526398 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 threonine dehydratase catabolic TdcB or b3117 or z4469 or ecs3997 SWALL:THD2_ECOLI (SWALL:P05792) (329 aa) fasta scores: E(): 1.8e-29, 36.9% id in 317 aa, and to Streptomyces coelicolor threonine dehydratase sco0821 or scf43a.11C SWALL:Q9XAA4 (EMBL:AL096837) (325 aa) fasta scores: E(): 8.4e-34, 37.81% id in 320 aa; threonine dehydratase 2526398 3094380 BPSL2102 Burkholderia pseudomallei K96243 threonine dehydratase YP_108699.1 2525367 D 272560 CDS YP_108700.1 53719714 3094381 2526906..2527313 1 NC_006350.1 Similar to Xanthomonas campestris hypothetical protein xcc3078 SWALL:AAM42349 (EMBL:AE012422) (146 aa) fasta scores: E(): 1.8e-06, 37.24% id in 145 aa; hypothetical protein 2527313 3094381 BPSL2103 Burkholderia pseudomallei K96243 hypothetical protein YP_108700.1 2526906 D 272560 CDS YP_108701.1 53719715 3093585 complement(2527868..2530426) 1 NC_006350.1 Similar to Ralstonia solanacearum probable penicillin-binding 1 rsc2976 or rs01357 SWALL:Q8XV55 (EMBL:AL646073) (801 aa) fasta scores: E(): 2.2e-183, 61.61% id in 805 aa, and to Neisseria lactamica penicillin-binding protein 1A MrcA or PonA SWALL:PBPA_NEILA (SWALL:O87579) (798 aa) fasta scores: E(): 4.3e-129, 47.4% id in 791 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; penicillin-binding protein 2530426 3093585 BPSL2104 Burkholderia pseudomallei K96243 penicillin-binding protein YP_108701.1 2527868 R 272560 CDS YP_108702.1 53719716 3093586 2530906..2531586 1 NC_006350.1 Similar to Synechocystis sp. hypothetical protein sll0617 SWALL:Y617_SYNY3 (SWALL:Q55707) (267 aa) fasta scores: E(): 7.6e-11, 30.49% id in 223 aa, and to Deinococcus radiodurans phage shock protein A dr1473 SWALL:Q9RUB7 (EMBL:AE001992) (223 aa) fasta scores: E(): 6.3e-10, 27.87% id in 226 aa; hypothetical protein 2531586 3093586 BPSL2105 Burkholderia pseudomallei K96243 hypothetical protein YP_108702.1 2530906 D 272560 CDS YP_108703.1 53719717 3093805 2531701..2532915 1 NC_006350.1 hypothetical protein 2532915 3093805 BPSL2106 Burkholderia pseudomallei K96243 hypothetical protein YP_108703.1 2531701 D 272560 CDS YP_108704.1 53719718 3092570 2533099..2533530 1 NC_006350.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2533530 mscL 3092570 mscL Burkholderia pseudomallei K96243 large-conductance mechanosensitive channel YP_108704.1 2533099 D 272560 CDS YP_108705.1 53719719 3093806 2533842..2534339 1 NC_006350.1 hypothetical protein 2534339 3093806 BPSL2108 Burkholderia pseudomallei K96243 hypothetical protein YP_108705.1 2533842 D 272560 CDS YP_108706.1 53719720 3093976 complement(2534521..2535408) 1 NC_006350.1 Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GlxR or GlxB1 or b0509 SWALL:GLXR_ECOLI (SWALL:P77161) (292 aa) fasta scores: E(): 2.7e-23, 34.7% id in 291 aa, and to Ralstonia solanacearum probable oxidoreductase rsc2429 or rs02679 SWALL:Q8XWP4 (EMBL:AL646070) (298 aa) fasta scores: E(): 3.1e-23, 33.21% id in 292 aa; glyoxylate-like oxidoreductase 2535408 3093976 BPSL2109 Burkholderia pseudomallei K96243 glyoxylate-like oxidoreductase YP_108706.1 2534521 R 272560 CDS YP_108707.1 53719721 3093977 2535552..2535761 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp1175 or rs05065 SWALL:Q8XQP6 (EMBL:AL646083) (83 aa) fasta scores: E(): 1.2e-14, 58.82% id in 68 aa, and to Pseudomonas aeruginosa hypothetical protein pa0038 SWALL:Q9I794 (EMBL:AE004443) (71 aa) fasta scores: E(): 5.2e-14, 60.29% id in 68 aa; hypothetical protein 2535761 3093977 BPSL2110 Burkholderia pseudomallei K96243 hypothetical protein YP_108707.1 2535552 D 272560 CDS YP_108708.1 53719722 3092956 2536505..2537434 1 NC_006350.1 Similar to Pseudomonas putida transcriptional activator protein NahR SWALL:NAHR_PSEPU (SWALL:P10183) (300 aa) fasta scores: E(): 4.1e-26, 31.39% id in 293 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2094 or rs03659 SWALL:Q8XXL9 (EMBL:AL646068) (316 aa) fasta scores: E(): 2.1e-68, 54.63% id in 302 aa; LysR family transcriptional regulator 2537434 3092956 BPSL2111 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108708.1 2536505 D 272560 CDS YP_108709.1 53719723 3092957 complement(2537704..2539134) 1 NC_006350.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 2539134 3092957 BPSL2112 Burkholderia pseudomallei K96243 hydroxydechloroatrazine ethylaminohydrolase YP_108709.1 2537704 R 272560 CDS YP_108710.1 53719724 3094679 2539694..2540053 1 NC_006350.1 Similar to Bacillus subtilis transthyretin-like protein PucM SWALL:PUCM_BACSU (SWALL:O32142) (121 aa) fasta scores: E(): 2.4e-22, 49.57% id in 117 aa, and to Ralstonia solanacearum hypothetical transthyretin-like protein rsc2116 or rs01488 SWALL:YL16_RALSO (SWALL:Q8XXJ7) (117 aa) fasta scores: E(): 6.7e-30, 64.95% id in 117 aa; purine catabolism-like protein 2540053 3094679 BPSL2113 Burkholderia pseudomallei K96243 purine catabolism-like protein YP_108710.1 2539694 D 272560 CDS YP_108711.1 53719725 3094680 2540103..2541305 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2115 or rs01489 SWALL:Q8XXJ8 (EMBL:AL646068) (414 aa) fasta scores: E(): 2.5e-80, 59.46% id in 412 aa, and to Rhizobium meliloti hypothetical membrane protein rb0796 or smb21292 SWALL:Q92VB2 (EMBL:AL603644) (412 aa) fasta scores: E(): 2.3e-66, 45.54% id in 404 aa; hypothetical protein 2541305 3094680 BPSL2114 Burkholderia pseudomallei K96243 hypothetical protein YP_108711.1 2540103 D 272560 CDS YP_108712.1 53719726 3094421 complement(2542171..2542683) 1 NC_006350.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 2542683 3094421 BPSL2115 Burkholderia pseudomallei K96243 ureidoglycolate hydrolase YP_108712.1 2542171 R 272560 CDS YP_108713.1 53719727 3094422 complement(2542680..2543693) 1 NC_006350.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase 2543693 3094422 BPSL2116 Burkholderia pseudomallei K96243 allantoicase YP_108713.1 2542680 R 272560 CDS YP_108714.1 53719728 3093924 complement(2543922..2544446) 1 NC_006350.1 Similar to Bacillus subtilis uricase PucL SWALL:URIC_BACSU (SWALL:O32141) (494 aa) fasta scores: E(): 2.4e-21, 43.97% id in 166 aa, and to Ralstonia solanacearum hypothetical protein rsc2121 or rs01483 SWALL:Q8XXJ2 (EMBL:AL646068) (173 aa) fasta scores: E(): 8.6e-38, 67.68% id in 164 aa; uricase 2544446 3093924 BPSL2117 Burkholderia pseudomallei K96243 uricase YP_108714.1 2543922 R 272560 CDS YP_108715.1 53719729 3093925 complement(2544443..2545396) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2120 or rs01484 SWALL:Q8XXJ3 (EMBL:AL646068) (328 aa) fasta scores: E(): 3.2e-100, 73.46% id in 309 aa, and to Pseudomonas aeruginosa hypothetical protein pa1517 SWALL:Q9I3J6 (EMBL:AE004580) (308 aa) fasta scores: E(): 1e-77, 61.18% id in 304 aa; hypothetical protein 2545396 3093925 BPSL2118 Burkholderia pseudomallei K96243 hypothetical protein YP_108715.1 2544443 R 272560 CDS YP_108716.1 53719730 3091737 complement(2545542..2546516) 1 NC_006350.1 Similar to Agrobacterium sp. IP I-671 hydantoin-racemase HyuA SWALL:Q8VT63 (EMBL:AF335479) (247 aa) fasta scores: E(): 6e-34, 53.9% id in 243 aa, and to Pseudomonas sp. hydantoin racemase HyuE SWALL:HYUE_PSESN (SWALL:Q00924) (249 aa) fasta scores: E(): 2.2e-28, 48.96% id in 241 aa. Note: The database matches finish at approximately residue 245 and the C-terminal region of this CDS has a high content in Ala and Pro amino acid residues; amino acid racemase 2546516 3091737 BPSL2119 Burkholderia pseudomallei K96243 amino acid racemase YP_108716.1 2545542 R 272560 CDS YP_108717.1 53719731 3091738 complement(2546527..2548059) 1 NC_006350.1 Similar to Bacillus subtilis probable allantoin permease PucI SWALL:ALLP_BACSU (SWALL:P94575) (490 aa) fasta scores: E(): 1.3e-56, 33.97% id in 471 aa, and to Yersinia pestis permease ypo1083 SWALL:Q8ZH28 (EMBL:AJ414146) (494 aa) fasta scores: E(): 6.7e-114, 59.66% id in 481 aa. Note: This CDS has possible alternative start codons at residues 15 or 43; transport-related membrane protein 2548059 3091738 BPSL2120 Burkholderia pseudomallei K96243 transport-related membrane protein YP_108717.1 2546527 R 272560 CDS YP_108718.1 53719732 3093416 complement(2548172..2548876) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsc2117 or rs01487 SWALL:Q8XXJ6 (EMBL:AL646068) (250 aa) fasta scores: E(): 2.7e-31, 44.2% id in 233 aa, and to Agrobacterium tumefaciens transcriptional regulator, GntR family atu4702 or agr_l_357 SWALL:Q8U6V4 (EMBL:AE009398) (225 aa) fasta scores: E(): 3.1e-26, 41.36% id in 220 aa; GntR family transcriptional regulator 2548876 3093416 BPSL2121 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_108718.1 2548172 R 272560 CDS YP_108719.1 53719733 3093417 complement(2549191..2550132) 1 NC_006350.1 catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A 2550132 ldcA 3093417 ldcA Burkholderia pseudomallei K96243 L,D-carboxypeptidase A YP_108719.1 2549191 R 272560 CDS YP_108720.1 53719734 3091900 complement(2550188..2550712) 1 NC_006350.1 Similar to Azoarcus evansii hypothetical protein SWALL:CAD21697 (EMBL:AJ428571) (154 aa) fasta scores: E(): 1.6e-38, 69.86% id in 146 aa, and to Salmonella typhimurium, and Salmonella typhi cytosine/adenosine deaminase stm2568 or sty2814 SWALL:Q8XGY4 (EMBL:AE008817) (183 aa) fasta scores: E(): 2.9e-29, 51.8% id in 166 aa; deaminase 2550712 3091900 BPSL2123 Burkholderia pseudomallei K96243 deaminase YP_108720.1 2550188 R 272560 CDS YP_108721.1 53719735 3091901 complement(2550781..2551182) 1 NC_006350.1 Similar to Bacillus halodurans hypothetical protein bh0859 SWALL:Q9KEJ3 (EMBL:AP001510) (123 aa) fasta scores: E(): 1.5e-08, 35.71% id in 126 aa, and to Salmonella typhimurium cytoplasmic protein YhdN or stm3413 SWALL:Q8ZLM2 (EMBL:AE008857) (122 aa) fasta scores: E(): 1.7e-08, 35.53% id in 121 aa; hypothetical protein 2551182 3091901 BPSL2124 Burkholderia pseudomallei K96243 hypothetical protein YP_108721.1 2550781 R 272560 CDS YP_108722.1 53719736 3091514 complement(2551984..2552490) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0055 SWALL:Q9I777 (EMBL:AE004445) (168 aa) fasta scores: E(): 1.5e-35, 60.47% id in 167 aa, and to Ralstonia solanacearum hypothetical protein rsp1548 or rs02104 SWALL:Q8XPT9 (EMBL:AL646085) (170 aa) fasta scores: E(): 5.5e-27, 52.14% id in 163 aa; hypothetical protein 2552490 3091514 BPSL2125 Burkholderia pseudomallei K96243 hypothetical protein YP_108722.1 2551984 R 272560 CDS YP_108723.1 53719737 3091515 2552858..2554078 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1352 SWALL:Q9I3Z2 (EMBL:AE004564) (403 aa) fasta scores: E(): 1.9e-79, 62.28% id in 403 aa, and to Escherichia coli hypothetical protein YgaY or b2680/b2681 SWALL:YGAY_ECOLI (SWALL:P76628) (394 aa) fasta scores: E(): 2.3e-49, 40.21% id in 373 aa; transport-related, membrane protein 2554078 3091515 BPSL2126 Burkholderia pseudomallei K96243 transport-related, membrane protein YP_108723.1 2552858 D 272560 CDS YP_108724.1 53719738 3093632 complement(2555410..2557053) 1 NC_006350.1 glutamine-hydrolyzing; contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2557053 guaA 3093632 guaA Burkholderia pseudomallei K96243 GMP synthase YP_108724.1 2555410 R 272560 CDS YP_108725.1 53719739 3091512 complement(2557157..2557810) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1430 or rs05261 SWALL:Q8XZG5 (EMBL:AL646064) (192 aa) fasta scores: E(): 1.5e-09, 35.71% id in 196 aa; hypothetical protein 2557810 3091512 BPSL2128 Burkholderia pseudomallei K96243 hypothetical protein YP_108725.1 2557157 R 272560 CDS YP_108726.1 53719740 3092041 complement(2557817..2559277) 1 NC_006350.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 2559277 guaB 3092041 guaB Burkholderia pseudomallei K96243 inosine 5'-monophosphate dehydrogenase YP_108726.1 2557817 R 272560 CDS YP_108727.1 53719741 3091513 complement(2559694..2560458) 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein r00748 or smc00803 SWALL:Q92RU4 (EMBL:AL591784) (271 aa) fasta scores: E(): 2.8e-49, 67.79% id in 267 aa, and to Ralstonia solanacearum hypothetical protein rsc1113 or rs04007 SWALL:Q8Y0D1 (EMBL:AL646062) (244 aa) fasta scores: E(): 1.1e-36, 53.15% id in 254 aa; hypothetical protein 2560458 3091513 BPSL2130 Burkholderia pseudomallei K96243 hypothetical protein YP_108727.1 2559694 R 272560 CDS YP_108728.1 53719742 3092030 2561553..2562236 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical protein r00750 or smc00805 SWALL:Q92KM4 (EMBL:AL591784) (214 aa) fasta scores: E(): 1.3e-66, 79.9% id in 214 aa. Note: This CDS is longer in its C-terminal region than most of its database match; hypothetical protein 2562236 3092030 BPSL2133 Burkholderia pseudomallei K96243 hypothetical protein YP_108728.1 2561553 D 272560 CDS YP_108729.1 53719743 3093758 2562571..2563539 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1428 or rs05264 SWALL:Q8XZG7 (EMBL:AL646064) (313 aa) fasta scores: E(): 4.7e-60, 54.14% id in 314 aa, and to Caulobacter crescentus integral membrane protein cc0848 SWALL:Q9A9W3 (EMBL:AE005761) (312 aa) fasta scores: E(): 1.3e-47, 49.17% id in 303 aa; hypothetical protein 2563539 3093758 BPSL2134 Burkholderia pseudomallei K96243 hypothetical protein YP_108729.1 2562571 D 272560 CDS YP_108730.1 53719744 3093759 complement(2563691..2564014) 1 NC_006350.1 Similar to Yersinia pestis hypothetical protein ypo1103/y3077 ypo1103 or y3077 SWALL:YB03_YERPE (SWALL:Q8ZH12) (94 aa) fasta scores: E(): 5.6e-12, 50% id in 94 aa, and to Escherichia coli protein YfjF or b2618 SWALL:YFJF_ECOLI (SWALL:P52119) (96 aa) fasta scores: E(): 8.8e-12, 54.02% id in 87 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein 2564014 3093759 BPSL2135 Burkholderia pseudomallei K96243 hypothetical protein YP_108730.1 2563691 R 272560 CDS YP_108731.1 53719745 3094452 complement(2564020..2564457) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1425 or rs05267 SWALL:Q8XZH0 (EMBL:AL646064) (145 aa) fasta scores: E(): 9.4e-46, 73.61% id in 144 aa, and to Escherichia coli hypothetical protein YfjG or b2619 SWALL:YFJG_ECOLI (SWALL:P52121) (158 aa) fasta scores: E(): 1.4e-21, 42.25% id in 142 aa; hypothetical protein 2564457 3094452 BPSL2136 Burkholderia pseudomallei K96243 hypothetical protein YP_108731.1 2564020 R 272560 CDS YP_108732.1 53719746 3092303 2564555..2565001 1 NC_006350.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2565001 smpB 3092303 smpB Burkholderia pseudomallei K96243 SsrA-binding protein YP_108732.1 2564555 D 272560 CDS YP_108733.1 53719747 3094453 complement(2565179..2566126) 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc1423 or rs05269 SWALL:Q8XZH2 (EMBL:AL646064) (308 aa) fasta scores: E(): 1.4e-87, 84% id in 300 aa, and to Neisseria meningitidis periplasmic protein nma1382 or gna1220 SWALL:Q9JR80 (EMBL:AL162755) (315 aa) fasta scores: E(): 4.6e-54, 65.58% id in 308 aa; hypothetical protein 2566126 3094453 BPSL2138 Burkholderia pseudomallei K96243 hypothetical protein YP_108733.1 2565179 R 272560 CDS YP_108734.1 53719748 3094444 complement(2566206..2566640) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1422 or rs05270 SWALL:Q8XZH3 (EMBL:AL646064) (142 aa) fasta scores: E(): 9.8e-20, 47.88% id in 142 aa, and low similarity to Neisseria meningitidis membrane protein nma1383 SWALL:Q9JUC5 (EMBL:AL162755) (135 aa) fasta scores: E(): 0.00044, 32.37% id in 139 aa; hypothetical protein 2566640 3094444 BPSL2139 Burkholderia pseudomallei K96243 hypothetical protein YP_108734.1 2566206 R 272560 CDS YP_108735.1 53719749 3092220 complement(2566768..2569167) 1 NC_006350.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2569167 ppsA 3092220 ppsA Burkholderia pseudomallei K96243 phosphoenolpyruvate synthase YP_108735.1 2566768 R 272560 CDS YP_108736.1 53719750 3094445 complement(2569906..2570643) 1 NC_006350.1 Similar to Anabaena sp. hypothetical protein alr0975 SWALL:Q8YY76 (EMBL:AP003584) (242 aa) fasta scores: E(): 4.8e-35, 49.53% id in 216 aa, and to Athyrium yokoscense phytochelatin synthase AypCS1 SWALL:Q948S0 (EMBL:AB057412) (488 aa) fasta scores: E(): 6.6e-18, 36.44% id in 214 aa. Note: Appart from the first match quoted, the rest of the significant matches are to N-terminal regions of eukaryotic proteins; hypothetical protein 2570643 3094445 BPSL2141 Burkholderia pseudomallei K96243 hypothetical protein YP_108736.1 2569906 R 272560 CDS YP_108737.1 53719751 3092352 complement(2571036..2572925) 1 NC_006350.1 Similar to the N-terminal region of Xanthomonas sp. xanthomonapepsin precursor SWALL:XANP_XANS2 (SWALL:Q60106) (827 aa) fasta scores: E(): 4.6e-65, 46.42% id in 644 aa, and to the full length Pseudomonas sp. pseudomonapepsin precursor Pcp SWALL:PICP_PSESR (SWALL:P42790) (587 aa) fasta scores: E(): 2.5e-24, 48.07% id in 624 aa; peptidase 2572925 3092352 BPSL2142 Burkholderia pseudomallei K96243 peptidase YP_108737.1 2571036 R 272560 CDS YP_108738.1 53719752 3092353 2573475..2574290 1 NC_006350.1 Similar to Ralstonia solanacearum ATP-binding protein rsc1420 or rs05272 SWALL:Q8XZH5 (EMBL:AL646064) (279 aa) fasta scores: E(): 3.8e-78, 76.49% id in 268 aa, and to Neisseria meningitidis hypothetical protein nmb0619 SWALL:Q9K0I1 (EMBL:AE002417) (273 aa) fasta scores: E(): 2.1e-47, 50.18% id in 267 aa; hypothetical protein 2574290 3092353 BPSL2143 Burkholderia pseudomallei K96243 hypothetical protein YP_108738.1 2573475 D 272560 CDS YP_108739.1 53719753 3094042 complement(2574492..2575280) 1 NC_006350.1 Similar to Ralstonia solanacearum trna/rRNA methyltransferase rsc1419 or rs05273 SWALL:Q8XZH6 (EMBL:AL646064) (259 aa) fasta scores: E(): 2.2e-52, 55.03% id in 258 aa, and to Neisseria meningitidis RNA methyltransferase nma1351 SWALL:Q9JUE8 (EMBL:AL162755) (261 aa) fasta scores: E(): 7.7e-30, 41.44% id in 263 aa; RNA methylase 2575280 3094042 BPSL2144 Burkholderia pseudomallei K96243 RNA methylase YP_108739.1 2574492 R 272560 CDS YP_108740.1 53719754 3092384 complement(2575277..2575921) 1 NC_006350.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 2575921 rnhB 3092384 rnhB Burkholderia pseudomallei K96243 ribonuclease HII YP_108740.1 2575277 R 272560 CDS YP_108741.1 53719755 3094043 complement(2575921..2577087) 1 NC_006350.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 2577087 lpxB 3094043 lpxB Burkholderia pseudomallei K96243 lipid-A-disaccharide synthase YP_108741.1 2575921 R 272560 CDS YP_108742.1 53719756 3093538 complement(2577091..2577879) 1 NC_006350.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 2577879 lpxA 3093538 lpxA Burkholderia pseudomallei K96243 UDP-N-acetylglucosamine acyltransferase YP_108742.1 2577091 R 272560 CDS YP_108743.1 53719757 3094303 complement(2577935..2578444) 1 NC_006350.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 2578444 fabZ 3094303 fabZ Burkholderia pseudomallei K96243 (3R)-hydroxymyristoyl-ACP dehydratase YP_108743.1 2577935 R 272560 CDS YP_108744.1 53719758 3093857 complement(2578548..2579633) 1 NC_006350.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2579633 lpxD 3093857 lpxD Burkholderia pseudomallei K96243 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_108744.1 2578548 R 272560 CDS YP_108745.1 53719759 3092934 complement(2579650..2580183) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1413 or rs05279 SWALL:Q8XZI2 (EMBL:AL646064) (184 aa) fasta scores: E(): 6.5e-32, 71.25% id in 160 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 histone-like protein HLP-1 precursor HlpA or Skp or OmpH or b0178 or c0215 or z0190 or ecs0180 SWALL:HLPA_ECOLI (SWALL:P11457) (161 aa) fasta scores: E(): 1.3e-05, 35.44% id in 158 aa; outer membrane protein 2580183 3092934 BPSL2150 Burkholderia pseudomallei K96243 outer membrane protein YP_108745.1 2579650 R 272560 CDS YP_108746.1 53719760 3092935 complement(2580221..2582530) 1 NC_006350.1 Similar to Ralstonia solanacearum outer membrane signal peptide protein rsc1412 or rs05280 SWALL:Q8XZI3 (EMBL:AL646064) (765 aa) fasta scores: E(): 4e-194, 63.84% id in 769 aa, and to Pseudomonas aeruginosa probable outer membrane protein pa3648 SWALL:Q9HXY4 (EMBL:AE004784) (797 aa) fasta scores: E(): 3.6e-94, 38% id in 800 aa; outer membrane protein 2582530 3092935 BPSL2151 Burkholderia pseudomallei K96243 outer membrane protein YP_108746.1 2580221 R 272560 CDS YP_108747.1 53719761 3092341 complement(2582595..2583986) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 protease EcfE or b0176 or z0187 or ecs0178 SWALL:ECFE_ECOLI (SWALL:P37764) (450 aa) fasta scores: E(): 1.2e-37, 39.48% id in 466 aa, and to Ralstonia solanacearum hypothetical zinc metalloprotease rsc1411 or rs05281 SWALL:YE11_RALSO (SWALL:Q8XZI4) (462 aa) fasta scores: E(): 1.2e-66, 45.25% id in 464 aa; membrane-bound protease 2583986 3092341 BPSL2152 Burkholderia pseudomallei K96243 membrane-bound protease YP_108747.1 2582595 R 272560 CDS YP_108748.1 53719762 3094319 complement(2584004..2585200) 1 NC_006350.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2585200 dxr 3094319 dxr Burkholderia pseudomallei K96243 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_108748.1 2584004 R 272560 CDS YP_108749.1 53719763 3092342 complement(2585215..2586036) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 phosphatidate cytidylyltransferase CdsA or Cds or b0175 or z0186 or ecs0177 SWALL:CDSA_ECOLI (SWALL:P06466) (249 aa) fasta scores: E(): 9.8e-07, 36.18% id in 257 aa, and to Ralstonia solanacearum probable phosphatidate cytidylyltransferase transmembrane protein rsc1409 or rs05283 SWALL:Q8XZI6 (EMBL:AL646064) (271 aa) fasta scores: E(): 1.5e-42, 54.15% id in 277 aa; phosphatidate cytidylyltransferase membrane protein 2586036 3092342 BPSL2154 Burkholderia pseudomallei K96243 phosphatidate cytidylyltransferase membrane protein YP_108749.1 2585215 R 272560 CDS YP_108750.1 53719764 3093554 complement(2586030..2586812) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 undecaprenyl pyrophosphate synthetase UppS or Rth or b0174 or c0211 or z0185 or ecs0176 SWALL:UPPS_ECOLI (SWALL:Q47675) (253 aa) fasta scores: E(): 1.4e-47, 54.82% id in 228 aa, and to Ralstonia solanacearum probable undecaprenyl pyrophosphate synthetase rsc1408 or rs05284 SWALL:Q8XZI7 (EMBL:AL646064) (258 aa) fasta scores: E(): 1.9e-68, 67.57% id in 256 aa; undecaprenyl pyrophosphate synthetase 2586812 uppS 3093554 uppS Burkholderia pseudomallei K96243 undecaprenyl pyrophosphate synthetase YP_108750.1 2586030 R 272560 CDS YP_108751.1 53719765 3093900 complement(2586860..2587420) 1 NC_006350.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2587420 frr 3093900 frr Burkholderia pseudomallei K96243 ribosome recycling factor YP_108751.1 2586860 R 272560 CDS YP_108752.1 53719766 3093161 complement(2587511..2588224) 1 NC_006350.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 2588224 pyrH 3093161 pyrH Burkholderia pseudomallei K96243 uridylate kinase YP_108752.1 2587511 R 272560 CDS YP_108753.1 53719767 3092745 complement(2588403..2589284) 1 NC_006350.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2589284 tsf 3092745 tsf Burkholderia pseudomallei K96243 elongation factor Ts YP_108753.1 2588403 R 272560 CDS YP_108754.1 53719768 3093074 complement(2589467..2590207) 1 NC_006350.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2590207 rpsB 3093074 rpsB Burkholderia pseudomallei K96243 30S ribosomal protein S2 YP_108754.1 2589467 R 272560 CDS YP_008992009.1 568335729 18093825 2590494..2590646 1 NC_006350.1 methionine aminopeptidase; hypothetical protein 2590646 18093825 BPSL2159b Burkholderia pseudomallei K96243 hypothetical protein YP_008992009.1 2590494 D 272560 CDS YP_108755.1 53719769 3094064 2590690..2591505 1 NC_006350.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 2591505 map 3094064 map Burkholderia pseudomallei K96243 methionine aminopeptidase YP_108755.1 2590690 D 272560 CDS YP_108756.1 53719770 3093139 2591671..2594247 1 NC_006350.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 2594247 3093139 BPSL2161 Burkholderia pseudomallei K96243 PII uridylyl-transferase YP_108756.1 2591671 D 272560 CDS YP_108757.1 53719771 3093140 2595237..2595986 1 NC_006350.1 Similar to Neisseria meningitidis hypothetical protein nmb0806 SWALL:Q9K020 (EMBL:AE002434) (252 aa) fasta scores: E(): 2.5e-34, 64.25% id in 249 aa, and to Thermoanaerobacter tengcongensis 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase RsuA2 or tte1332 SWALL:Q8R5S6 (EMBL:AE013093) (236 aa) fasta scores: E(): 1.6e-11, 32.14% id in 252 aa. Note: Most of the database macthes have a longer N-terminal region that this CDS; pseudouridylate synthase 2595986 3093140 BPSL2162 Burkholderia pseudomallei K96243 pseudouridylate synthase YP_108757.1 2595237 D 272560 CDS YP_108758.1 53719772 3093958 complement(2596181..2596714) 1 NC_006350.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2596714 def 3093958 def Burkholderia pseudomallei K96243 peptide deformylase YP_108758.1 2596181 R 272560 CDS YP_108759.1 53719773 3092689 complement(2596711..2598786) 1 NC_006350.1 Similar to Escherichia coli DNA ligase LigA or Lig or DnaI or PdeC or Lop or b2411 SWALL:DNLJ_ECOLI (SWALL:P15042) (671 aa) fasta scores: E(): 4.8e-141, 57.84% id in 669 aa, and to Yersinia pestis DNA ligase LigA or ypo2989 SWALL:Q8ZCJ6 (EMBL:AJ414154) (670 aa) fasta scores: E(): 6e-139, 57.33% id in 668 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; DNA ligase 2598786 ligA 3092689 ligA Burkholderia pseudomallei K96243 DNA ligase YP_108759.1 2596711 R 272560 CDS YP_108760.1 53719774 3093959 complement(2599226..2600512) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1397 or rs05761 SWALL:Q8XZJ8 (EMBL:AL646064) (408 aa) fasta scores: E(): 5.9e-54, 47.34% id in 433 aa, and to Neisseria meningitidis hypothetical protein nma0866 SWALL:Q9JVF0 (EMBL:AL162754) (428 aa) fasta scores: E(): 5.2e-08, 25.92% id in 432 aa; hypothetical protein 2600512 3093959 BPSL2165 Burkholderia pseudomallei K96243 hypothetical protein YP_108760.1 2599226 R 272560 CDS YP_108761.1 53719775 3091528 complement(2600579..2604091) 1 NC_006350.1 Similar to Bacillus subtilis chromosome partition protein Smc SWALL:SMC_BACSU (SWALL:P51834) (1186 aa) fasta scores: E(): 7.4e-30, 29.27% id in 1206 aa, and to Burkholderia cepacia chromosome partition protein Smc SWALL:Q8VVA2 (EMBL:AJ417689) (1172 aa) fasta scores: E(): 0, 88.88% id in 1170 aa; chromosome partition protein 2604091 3091528 BPSL2166 Burkholderia pseudomallei K96243 chromosome partition protein YP_108761.1 2600579 R 272560 CDS YP_108762.1 53719776 3091529 complement(2604240..2605187) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1395 or rs05759 SWALL:Q8XZK0 (EMBL:AL646064) (306 aa) fasta scores: E(): 2.2e-46, 48.65% id in 298 aa, and to Bacillus halodurans hypothetical protein bh1937 SWALL:Q9KBJ0 (EMBL:AP001513) (298 aa) fasta scores: E(): 9e-05, 21.66% id in 300 aa; hypothetical protein 2605187 3091529 BPSL2167 Burkholderia pseudomallei K96243 hypothetical protein YP_108762.1 2604240 R 272560 CDS YP_108763.1 53719777 3093039 2605452..2606684 1 NC_006350.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2606684 3093039 BPSL2168 Burkholderia pseudomallei K96243 succinyldiaminopimelate transaminase YP_108763.1 2605452 D 272560 CDS YP_108764.1 53719778 3091791 2606741..2607568 1 NC_006350.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2607568 dapD 3091791 dapD Burkholderia pseudomallei K96243 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_108764.1 2606741 D 272560 CDS YP_108765.1 53719779 3093040 2607568..2607942 1 NC_006350.1 Similar to Escherichia coli protein YffB or b2471 SWALL:YFFB_ECOLI (SWALL:P24178) (118 aa) fasta scores: E(): 3.3e-16, 41.96% id in 112 aa, and to Ralstonia solanacearum hypothetical protein rsc1391 or rs04674 SWALL:Q8XZK4 (EMBL:AL646064) (118 aa) fasta scores: E(): 4.7e-27, 66.37% id in 113 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 2607942 3093040 BPSL2170 Burkholderia pseudomallei K96243 hypothetical protein YP_108765.1 2607568 D 272560 CDS YP_108766.1 53719780 3091792 2608004..2609155 1 NC_006350.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2609155 dapE 3091792 dapE Burkholderia pseudomallei K96243 succinyl-diaminopimelate desuccinylase YP_108766.1 2608004 D 272560 CDS YP_108767.1 53719781 3092954 2609169..2610092 1 NC_006350.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2610092 3092954 BPSL2172 Burkholderia pseudomallei K96243 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_108767.1 2609169 D 272560 CDS YP_108768.1 53719782 3092955 2610096..2610323 1 NC_006350.1 Doubtful CDS. No significant database matches. Contains a repeat at the N-terminal region; hypothetical protein 2610323 3092955 BPSL2173 Burkholderia pseudomallei K96243 hypothetical protein YP_108768.1 2610096 D 272560 CDS YP_108769.1 53719783 3091505 2610320..2611759 1 NC_006350.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2611759 cls 3091505 cls Burkholderia pseudomallei K96243 cardiolipin synthetase YP_108769.1 2610320 D 272560 CDS YP_108770.1 53719784 3094481 complement(2611872..2612351) 1 NC_006350.1 Full length similarity to Saccharomyces cerevisiae glutathione peroxidase Hyr1 SWALL:GSHJ_YEAST (SWALL:P40581) (163 aa) fasta scores: E(): 1.2e-33, 50.94% id in 159 aa, and to Synechocystis sp. glutathione peroxidase slr1171 SWALL:GPO_SYNY3 (SWALL:P74250) (169 aa) fasta scores: E(): 4.3e-40, 62.11% id in 161 aa; glutathione peroxidase 2612351 gpo 3094481 gpo Burkholderia pseudomallei K96243 glutathione peroxidase YP_108770.1 2611872 R 272560 CDS YP_108771.1 53719785 3091506 2612497..2614437 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical ABC transporter ATP-binding protein YheS or b3352 or z4713 or ecs4203 SWALL:YHES_ECOLI (SWALL:P45535) (637 aa) fasta scores: E(): 4.1e-97, 53.48% id in 645 aa, and to Pasteurella multocida hypothetical protein pm1582 SWALL:Q9CKM9 (EMBL:AE006195) (640 aa) fasta scores: E(): 2e-101, 52.01% id in 646 aa; ABC transporter ATP-binding protein 2614437 3091506 BPSL2176 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_108771.1 2612497 D 272560 CDS YP_108772.1 53719786 3091617 complement(2614525..2614857) 1 NC_006350.1 hypothetical protein 2614857 3091617 BPSL2177 Burkholderia pseudomallei K96243 hypothetical protein YP_108772.1 2614525 R 272560 CDS YP_108773.1 53719787 3092056 complement(2614955..2616331) 1 NC_006350.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2616331 radA 3092056 radA Burkholderia pseudomallei K96243 DNA repair protein RadA YP_108773.1 2614955 R 272560 CDS YP_108774.1 53719788 3092804 complement(2616342..2617412) 1 NC_006350.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 2617412 alr 3092804 alr Burkholderia pseudomallei K96243 alanine racemase YP_108774.1 2616342 R 272560 CDS YP_108775.1 53719789 3091618 2617624..2618931 1 NC_006350.1 Similar to Escherichia coli hypothetical protein YgeD or b2835 SWALL:YGED_ECOLI (SWALL:P39196) (397 aa) fasta scores: E(): 5.7e-21, 38.18% id in 419 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1370 or rs04653 SWALL:Q8XZM5 (EMBL:AL646064) (438 aa) fasta scores: E(): 3.4e-123, 74.88% id in 438 aa; lysophospholipid transporter LplT 2618931 3091618 BPSL2180 Burkholderia pseudomallei K96243 lysophospholipid transporter LplT YP_108775.1 2617624 D 272560 CDS YP_108776.1 53719790 3091851 2619042..2619851 1 NC_006350.1 Similar to Escherichia coli phosphomethylpyrimidine kinase ThiD or b2103 SWALL:THID_ECOLI (SWALL:P76422) (266 aa) fasta scores: E(): 6.5e-54, 60.45% id in 263 aa, and to Salmonella typhimurium phosphomethylpyrimidine kinase ThiD or stm2146 SWALL:THID_SALTY (SWALL:P55882) (266 aa) fasta scores: E(): 3.4e-53, 59.69% id in 263 aa; phosphomethylpyrimidine kinase 2619851 thiD 3091851 thiD Burkholderia pseudomallei K96243 phosphomethylpyrimidine kinase YP_108776.1 2619042 D 272560 CDS YP_108777.1 53719791 3093748 complement(2620271..2621251) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3089 SWALL:Q9HZB9 (EMBL:AE004733) (321 aa) fasta scores: E(): 5.5e-20, 36.9% id in 317 aa, and to Neisseria meningitidis hypothetical protein nma1561 SWALL:Q9JU01 (EMBL:AL162756) (292 aa) fasta scores: E(): 2.3e-05, 30.59% id in 304 aa; hypothetical protein 2621251 3093748 BPSL2182 Burkholderia pseudomallei K96243 hypothetical protein YP_108777.1 2620271 R 272560 CDS YP_108778.1 53719792 3093749 complement(2621248..2622102) 1 NC_006350.1 Similar to Chlorobium tepidum DNA polymerase, bacteriophage-type ct0206 SWALL:AAM71454 (EMBL:AE012800) (208 aa) fasta scores: E(): 7.4e-28, 43.06% id in 209 aa, and to Thermoanaerobacter tengcongensis uracil-DNA glycosylase tte0077 SWALL:Q8RDF7 (EMBL:AE012981) (186 aa) fasta scores: E(): 3.2e-25, 48.86% id in 176 aa. Note: This CDS has an alternative start codon at residue 65; phage-related DNA polymerase 2622102 3093749 BPSL2183 Burkholderia pseudomallei K96243 phage-related DNA polymerase YP_108778.1 2621248 R 272560 CDS YP_108779.1 53719793 3093448 complement(2622584..2623066) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribosomal-protein-alanine acetyltransferase RimI or b4373 or c5453 or z5974 or ecs5331 SWALL:RIMI_ECOLI (SWALL:P09453) (148 aa) fasta scores: E(): 3.1e-12, 35.61% id in 146 aa, and to Pseudomonas aeruginosa peptide N-acetyltransferase pa4678 SWALL:Q9HVB7 (EMBL:AE004881) (150 aa) fasta scores: E(): 2.8e-20, 46.71% id in 152 aa; ribosomal-protein acetyltransferase 2623066 3093448 BPSL2184 Burkholderia pseudomallei K96243 ribosomal-protein acetyltransferase YP_108779.1 2622584 R 272560 CDS YP_108780.1 53719794 3093449 complement(2623078..2623839) 1 NC_006350.1 Similar to Escherichia coli hypothetical protease YeaZ or b1807 SWALL:YEAZ_ECOLI (SWALL:P76256) (231 aa) fasta scores: E(): 1.4e-15, 37.28% id in 236 aa, and to Pseudomonas aeruginosa hypothetical protein pa3685 SWALL:Q9HXV5 (EMBL:AE004788) (226 aa) fasta scores: E(): 4e-19, 43.69% id in 238 aa; family M22 non-peptidase 2623839 3093449 BPSL2185 Burkholderia pseudomallei K96243 family M22 non-peptidase YP_108780.1 2623078 R 272560 CDS YP_108781.1 53719795 3093962 2624009..2624278 1 NC_006350.1 Similar to Homo sapiens acyl-CoA-binding protein Dbi SWALL:ACBP_HUMAN (SWALL:P07108) (86 aa) fasta scores: E(): 3.1e-11, 45.57% id in 79 aa, and to Ralstonia solanacearum probable acyl-CoA-binding protein rsc1366 or rs04648 SWALL:Q8XZM9 (EMBL:AL646064) (105 aa) fasta scores: E(): 1.2e-23, 66.29% id in 89 aa; acyl-CoA-binding protein 2624278 3093962 BPSL2186 Burkholderia pseudomallei K96243 acyl-CoA-binding protein YP_108781.1 2624009 D 272560 CDS YP_108782.1 53719796 3093963 2624724..2626274 1 NC_006350.1 Similar to Escherichia coli ATP-dependent RNA helicase RhlE or b0797 SWALL:RHLE_ECOLI (SWALL:P25888) (454 aa) fasta scores: E(): 1e-39, 43.29% id in 455 aa, and to Ralstonia solanacearum ATP-dependent RNA helicase rsc0952 or rs04426 SWALL:Q8Y0U1 (EMBL:AL646061) (608 aa) fasta scores: E(): 3.9e-74, 58.07% id in 458 aa. CDS is extended at the N-terminus in comparison to orthologues; ATP-dependent RNA helicase 2626274 3093963 BPSL2187 Burkholderia pseudomallei K96243 ATP-dependent RNA helicase YP_108782.1 2624724 D 272560 CDS YP_108783.1 53719797 3092651 2626666..2627973 1 NC_006350.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 2627973 aceA 3092651 aceA Burkholderia pseudomallei K96243 isocitrate lyase YP_108783.1 2626666 D 272560 CDS YP_108784.1 53719798 3092701 complement(2628233..2628667) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp1159 or rs05426 SWALL:Q8XQR2 (EMBL:AL646083) (146 aa) fasta scores: E(): 2.1e-22, 50% id in 146 aa, and to Brucella melitensis universal stress protein family bmei0102 SWALL:Q8YJI1 (EMBL:AE009453) (149 aa) fasta scores: E(): 3.5e-13, 37.58% id in 149 aa; universal stress protein family protein 2628667 3092701 BPSL2189 Burkholderia pseudomallei K96243 universal stress protein family protein YP_108784.1 2628233 R 272560 CDS YP_108785.1 53719799 3092702 complement(2628947..2629849) 1 NC_006350.1 Similar to Escherichia coli hypothetical transcriptional regulator YeaT or b1799 SWALL:YEAT_ECOLI (SWALL:P76250) (307 aa) fasta scores: E(): 2.8e-33, 35.51% id in 290 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc1360 or rs04642 SWALL:Q8XZN5 (EMBL:AL646064) (309 aa) fasta scores: E(): 9.6e-97, 78.93% id in 299 aa; LysR family regulatory protein 2629849 3092702 BPSL2190 Burkholderia pseudomallei K96243 LysR family regulatory protein YP_108785.1 2628947 R 272560 CDS YP_108786.1 53719800 3093354 2630009..2630791 1 NC_006350.1 Similar to Ralstonia solanacearum 2-haloalkanoic acid dehalogenase rsc1362 or rs04644 SWALL:Q8XZN3 (EMBL:AL646064) (233 aa) fasta scores: E(): 2.6e-49, 61.94% id in 226 aa, and to Pseudomonas sp. 2-haloalkanoic acid dehalogenase SWALL:HAD_PSESP (SWALL:Q53464) (232 aa) fasta scores: E(): 1.1e-30, 44.06% id in 236 aa; dehalogenase 2630791 3093354 BPSL2191 Burkholderia pseudomallei K96243 dehalogenase YP_108786.1 2630009 D 272560 CDS YP_108787.1 53719801 3092656 2630844..2632436 1 NC_006350.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 2632436 aceB 3092656 aceB Burkholderia pseudomallei K96243 malate synthase YP_108787.1 2630844 D 272560 CDS YP_108788.1 53719802 3093355 complement(2633033..2633440) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1355 or rs04637 SWALL:Q8XZP0 (EMBL:AL646064) (137 aa) fasta scores: E(): 1.1e-22, 54.96% id in 131 aa, and to Sulfolobus solfataricus hypothetical protein sso2192 SWALL:Q97WM2 (EMBL:AE006825) (276 aa) fasta scores: E(): 1.9e-09, 36.92% id in 130 aa; hypothetical protein 2633440 3093355 BPSL2193 Burkholderia pseudomallei K96243 hypothetical protein YP_108788.1 2633033 R 272560 CDS YP_108789.1 53719803 3093172 complement(2633488..2633985) 1 NC_006350.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 2633985 menG 3093172 menG Burkholderia pseudomallei K96243 ribonuclease activity regulator protein RraA YP_108789.1 2633488 R 272560 CDS YP_108790.1 53719804 3093293 2634115..2634978 1 NC_006350.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsc3062 or rs00506 SWALL:Q8XUX1 (EMBL:AL646073) (268 aa) fasta scores: E(): 5.5e-56, 60.15% id in 251 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3927 SWALL:Q9HX87 (EMBL:AE004810) (262 aa) fasta scores: E(): 4.3e-36, 43.47% id in 230 aa; AraC family transcriptional regulator 2634978 3093293 BPSL2195 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_108790.1 2634115 D 272560 CDS YP_108791.1 53719805 3093294 complement(2635582..2636049) 1 NC_006350.1 Low similarity to Vibrio cholerae acetyltransferase, vca0402 SWALL:Q9KMF8 (EMBL:AE004375) (172 aa) fasta scores: E(): 8.1e-12, 39.31% id in 117 aa; acetyltransferase 2636049 3093294 BPSL2196 Burkholderia pseudomallei K96243 acetyltransferase YP_108791.1 2635582 R 272560 CDS YP_108792.1 53719806 3093847 complement(2637135..2638544) 1 NC_006350.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2638544 gltX 3093847 gltX Burkholderia pseudomallei K96243 glutamyl-tRNA synthetase YP_108792.1 2637135 R 272560 CDS YP_108793.1 53719807 3093563 2639117..2640052 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1178 or rs04543 SWALL:Q8Y066 (EMBL:AL646063) (319 aa) fasta scores: E(): 2.2e-55, 55.09% id in 314 aa, and to Xanthomonas axonopodis hypothetical protein xac0177 SWALL:AAM35069 (EMBL:AE011642) (345 aa) fasta scores: E(): 9.1e-49, 49.83% id in 303 aa; exported phospholipase 2640052 3093563 BPSL2198 Burkholderia pseudomallei K96243 exported phospholipase YP_108793.1 2639117 D 272560 CDS YP_108794.1 53719808 3093564 complement(2640218..2640919) 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc1177 or rs04548 SWALL:Q8Y067 (EMBL:AL646063) (222 aa) fasta scores: E(): 5.6e-32, 52.45% id in 204 aa, and to Neisseria meningitidis outer membrane protein precursor gna2001 SWALL:Q9JPN6 (EMBL:AF226478) (222 aa) fasta scores: E(): 9.3e-19, 34.8% id in 204 aa; peptidase 2640919 3093564 BPSL2199 Burkholderia pseudomallei K96243 peptidase YP_108794.1 2640218 R 272560 CDS YP_108795.1 53719809 3092765 complement(2641055..2642704) 1 NC_006350.1 Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YejF or b2180 SWALL:YEJF_ECOLI (SWALL:P33916) (529 aa) fasta scores: E(): 3.7e-79, 51.03% id in 533 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1176 or rs04549 SWALL:Q8Y068 (EMBL:AL646063) (551 aa) fasta scores: E(): 3.2e-109, 65.23% id in 535 aa; ABC transporter ATP-binding protein 2642704 3092765 BPSL2200 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_108795.1 2641055 R 272560 CDS YP_108796.1 53719810 3092766 complement(2642701..2643798) 1 NC_006350.1 Similar to Escherichia coli hypothetical ABC transporter permease YejE or b2179 SWALL:YEJE_ECOLI (SWALL:P33915) (341 aa) fasta scores: E(): 9.3e-68, 50.74% id in 337 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1175 or rs04550 SWALL:Q8Y069 (EMBL:AL646063) (374 aa) fasta scores: E(): 1.8e-98, 70.78% id in 356 aa; ABBC transport system, membrane protein 2643798 3092766 BPSL2201 Burkholderia pseudomallei K96243 ABBC transport system, membrane protein YP_108796.1 2642701 R 272560 CDS YP_108797.1 53719811 3092316 complement(2643800..2644840) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical ABC transporter permease YejB or b2178 or z3437 or ecs3070 SWALL:YEJB_ECOLI (SWALL:P33914) (364 aa) fasta scores: E(): 3.6e-65, 53.86% id in 362 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1174 or rs04551 SWALL:Q8Y070 (EMBL:AL646063) (351 aa) fasta scores: E(): 6.7e-98, 72.93% id in 351 aa; ABC transporter membrane protein 2644840 3092316 BPSL2202 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_108797.1 2643800 R 272560 CDS YP_108798.1 53719812 3092317 complement(2645029..2646981) 1 NC_006350.1 Similar to Escherichia coli hypothetical protein precursor YejA or b2177 SWALL:YEJA_ECOLI (SWALL:P33913) (604 aa) fasta scores: E(): 7.1e-60, 38.03% id in 589 aa, and to Ralstonia solanacearum probable substrate-binding periplasmic rsc1173 or rs04555 SWALL:Q8Y071 (EMBL:AL646063) (625 aa) fasta scores: E(): 9e-140, 60.42% id in 619 aa. Note: This CDS has a possible alternative start codon at residue 84; ABC transporter substrate-binding protein 2646981 3092317 BPSL2203 Burkholderia pseudomallei K96243 ABC transporter substrate-binding protein YP_108798.1 2645029 R 272560 CDS YP_108799.1 53719813 3091461 2647102..2647893 1 NC_006350.1 NADH; Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 2647893 fabI 3091461 fabI Burkholderia pseudomallei K96243 enoyl-ACP reductase YP_108799.1 2647102 D 272560 CDS YP_108800.1 53719814 3094715 complement(2648146..2648499) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsc2910 or rs00185 SWALL:Q8XVC1 (EMBL:AL646072) (105 aa) fasta scores: E(): 5.4e-12, 57.69% id in 104 aa, and to Bordetella pertussis Vrg-6 SWALL:Q45395 (EMBL:M77374) (105 aa) fasta scores: E(): 1.8e-09, 49.55% id in 113 aa; hypothetical protein 2648499 3094715 BPSL2205 Burkholderia pseudomallei K96243 hypothetical protein YP_108800.1 2648146 R 272560 CDS YP_108801.1 53719815 3094716 2648753..2648974 1 NC_006350.1 hypothetical protein 2648974 3094716 BPSL2206 Burkholderia pseudomallei K96243 hypothetical protein YP_108801.1 2648753 D 272560 CDS YP_108802.1 53719816 3092493 complement(2649224..2651545) 1 NC_006350.1 Similar to Mycobacterium tuberculosis hypothetical protein rv0197 or mtv033.05 SWALL:O53648 (EMBL:AL021928) (762 aa) fasta scores: E(): 5.8e-57, 44.79% id in 768 aa, and to Klebsiella pneumoniae nitrate reductase NasA SWALL:NASA_KLEPN (SWALL:Q06457) (866 aa) fasta scores: E(): 7.7e-22, 27.12% id in 505 aa; molybdopterin oxidoreductase 2651545 3092493 BPSL2207 Burkholderia pseudomallei K96243 molybdopterin oxidoreductase YP_108802.1 2649224 R 272560 CDS YP_108803.1 53719817 3091922 complement(2652050..2652823) 1 NC_006350.1 Similar to Azotobacter vinelandii ferredoxin--NADP reductase Fpr SWALL:FENR_AZOVI (SWALL:Q44532) (257 aa) fasta scores: E(): 2.2e-66, 65.47% id in 252 aa, and to Escherichia coli ferredoxin--NADP reductase Fpr or MvrA or b3924 SWALL:FENR_ECOLI (SWALL:P28861) (247 aa) fasta scores: E(): 1.8e-24, 36.99% id in 246 aa; ferredoxin-NADP reductase 2652823 fpr 3091922 fpr Burkholderia pseudomallei K96243 ferredoxin-NADP reductase YP_108803.1 2652050 R 272560 CDS YP_108804.1 53719818 3092494 complement(2652831..2653820) 1 NC_006350.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2653820 3092494 BPSL2209 Burkholderia pseudomallei K96243 molybdenum cofactor biosynthesis protein A YP_108804.1 2652831 R 272560 CDS YP_108805.1 53719819 3092480 complement(2653904..2654242) 1 NC_006350.1 Similar to Azotobacter vinelandii ferredoxin I FdxA SWALL:FER1_AZOVI (SWALL:P00214) (106 aa) fasta scores: E(): 1.2e-25, 63.55% id in 107 aa, and to Ralstonia solanacearum probable ferredoxin protein rsp0807 or rs01900 SWALL:Q8XRM4 (EMBL:AL646081) (112 aa) fasta scores: E(): 1.1e-27, 64.07% id in 103 aa; ferredoxin I 2654242 fdxA 3092480 fdxA Burkholderia pseudomallei K96243 ferredoxin I YP_108805.1 2653904 R 272560 CDS YP_108806.1 53719820 3094386 2654721..2655287 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2766 SWALL:Q9I077 (EMBL:AE004704) (193 aa) fasta scores: E(): 3.9e-26, 46.32% id in 177 aa, and to Rhizobium loti probable transcriptional regulator mlr2120 SWALL:Q98J38 (EMBL:AP002999) (195 aa) fasta scores: E(): 4e-11, 32.77% id in 180 aa; TetR family regulatory protein 2655287 3094386 BPSL2211 Burkholderia pseudomallei K96243 TetR family regulatory protein YP_108806.1 2654721 D 272560 CDS YP_108807.1 53719821 3094065 complement(2655361..2656179) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 methionine aminopeptidase Map or b0168 or c0203 or z0178 or ecs0170 SWALL:AMPM_ECOLI (SWALL:P07906) (264 aa) fasta scores: E(): 1.1e-51, 53.9% id in 256 aa, and to Yersinia pestis methionine aminopeptidase Map or ypo3337 SWALL:Q8ZBR7 (EMBL:AJ414156) (261 aa) fasta scores: E(): 9.4e-69, 67.45% id in 252 aa. Note: Also similar to BPSL2160, map (272 aa) fasta scores: E(): 6.7e-52, 52.963% identity in 270 aa overlap; methionine aminopeptidase 2 2656179 map2 3094065 map2 Burkholderia pseudomallei K96243 methionine aminopeptidase 2 YP_108807.1 2655361 R 272560 CDS YP_108808.1 53719822 3094387 complement(2656179..2656403) 1 NC_006350.1 Similar to Chromobacterium violaceum hypothetical protein cv2333 SWALL:Q7NVK9 (EMBL:AE016918) (75 aa) fasta scores: E(): 2.2e-14, 61.33% id in 75 aa, and to Pseudomonas syringae conserved domain protein pspto2361 SWALL:Q883J6 (EMBL:AE016864) (76 aa) fasta scores: E(): 2.6e-13, 73.58% id in 53 aa. Possible alternative translational start site; hypothetical protein 2656403 3094387 BPSL2213 Burkholderia pseudomallei K96243 hypothetical protein YP_108808.1 2656179 R 272560 CDS YP_108809.1 53719823 3091920 complement(2656629..2659325) 1 NC_006350.1 Similar to Rhizobium loti fusion protein contains ligase and probable arginosuccinate lyase msi203 SWALL:CAD31608 (EMBL:AL672113) (899 aa) fasta scores: E(): 7.9e-99, 38.19% id in 906 aa, N-terminal region to Rhizobium loti ligase/carboxylase msi201 SWALL:CAD31606 (EMBL:AL672113) (425 aa) fasta scores: E(): 5.4e-25, 31.08% id in 415 aa and C-terminal region to Rhizobium loti argininosuccinate lyase mll9226 SWALL:Q981V0 (EMBL:AP003015) (927 aa) fasta scores: E(): 4.4e-94, 37.19% id in 898 aa; argininosuccinate lyase 2659325 3091920 BPSL2214 Burkholderia pseudomallei K96243 argininosuccinate lyase YP_108809.1 2656629 R 272560 CDS YP_108810.1 53719824 3091921 complement(2659405..2660469) 1 NC_006350.1 Similar to Alcaligenes eutrophus cysteine synthase CysM SWALL:CYSM_ALCEU (SWALL:Q44004) (339 aa) fasta scores: E(): 1.1e-17, 32.99% id in 291 aa, and to Rhizobium loti cysteine synthase msi204 SWALL:CAD31609 (EMBL:AL672113) (355 aa) fasta scores: E(): 1.1e-47, 44.27% id in 332 aa; cysteine synthesis-like protein 2660469 3091921 BPSL2215 Burkholderia pseudomallei K96243 cysteine synthesis-like protein YP_108810.1 2659405 R 272560 CDS YP_108811.1 53719825 3092791 complement(2660474..2661673) 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein mll9228 SWALL:Q981U8 (EMBL:AP003015) (329 aa) fasta scores: E(): 7.6e-27, 38.35% id in 279 aa, and to Bacillus thuringiensis possible kinase pbt101 SWALL:CAD30141 (EMBL:AL731825) (299 aa) fasta scores: E(): 5.4e-22, 34.74% id in 259 aa; hypothetical protein 2661673 3092791 BPSL2216 Burkholderia pseudomallei K96243 hypothetical protein YP_108811.1 2660474 R 272560 CDS YP_108812.1 53719826 3092792 complement(2661696..2662661) 1 NC_006350.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2662661 3092792 BPSL2217 Burkholderia pseudomallei K96243 sulfate adenylyltransferase subunit 2 YP_108812.1 2661696 R 272560 CDS YP_108813.1 53719827 3094433 complement(2662817..2663635) 1 NC_006350.1 hypothetical protein 2663635 3094433 BPSL2218 Burkholderia pseudomallei K96243 hypothetical protein YP_108813.1 2662817 R 272560 CDS YP_108814.1 53719828 3094434 complement(2663718..2664812) 1 NC_006350.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2664812 3094434 BPSL2219 Burkholderia pseudomallei K96243 phosphoserine aminotransferase YP_108814.1 2663718 R 272560 CDS YP_108815.1 53719829 3092251 complement(2664853..2665980) 1 NC_006350.1 Similar to Rhizobium loti probable lipopolysaccharide modification acyltransferase mlr0739 SWALL:Q98M44 (EMBL:AP002995) (375 aa) fasta scores: E(): 1.7e-14, 25.84% id in 387 aa, and to Pseudomonas aeruginosa probable O-antigen acetylase pa5238 SWALL:Q9HTV2 (EMBL:AE004936) (662 aa) fasta scores: E(): 6.1e-13, 32.28% id in 381 aa; hypothetical protein 2665980 3092251 BPSL2220 Burkholderia pseudomallei K96243 hypothetical protein YP_108815.1 2664853 R 272560 CDS YP_108816.1 53719830 3092252 complement(2666032..2667186) 1 NC_006350.1 hypothetical protein 2667186 3092252 BPSL2221 Burkholderia pseudomallei K96243 hypothetical protein YP_108816.1 2666032 R 272560 CDS YP_108817.1 53719831 3094411 complement(2667189..2668100) 1 NC_006350.1 Similar to Thermoplasma acidophilum probable transketolase ta0617 SWALL:Q9HKI2 (EMBL:AL445064) (316 aa) fasta scores: E(): 2.6e-24, 32.67% id in 303 aa, and to Pyrococcus abyssi transketolase C-terminal section Tkt2 or pab0296 SWALL:Q9V1I1 (EMBL:AJ248284) (317 aa) fasta scores: E(): 9.6e-22, 32.65% id in 294 aa; transketolase 2668100 3094411 BPSL2222 Burkholderia pseudomallei K96243 transketolase YP_108817.1 2667189 R 272560 CDS YP_108818.1 53719832 3094412 complement(2668097..2668936) 1 NC_006350.1 Similar to Fusobacterium nucleatum transketolase subunit A fn0294 SWALL:Q8RGJ9 (EMBL:AE010542) (270 aa) fasta scores: E(): 2.2e-33, 42.53% id in 268 aa, and to Methanococcus jannaschii transketolase N-terminal section mj0681 SWALL:TKTN_METJA (SWALL:Q58094) (274 aa) fasta scores: E(): 2.5e-29, 38.62% id in 277 aa; transketolase 2668936 3094412 BPSL2223 Burkholderia pseudomallei K96243 transketolase YP_108818.1 2668097 R 272560 CDS YP_108819.1 53719833 3094717 complement(2668941..2669975) 1 NC_006350.1 hypothetical protein 2669975 3094717 BPSL2224 Burkholderia pseudomallei K96243 hypothetical protein YP_108819.1 2668941 R 272560 CDS YP_108820.1 53719834 3094718 complement(2670023..2670802) 1 NC_006350.1 hypothetical protein 2670802 3094718 BPSL2225 Burkholderia pseudomallei K96243 hypothetical protein YP_108820.1 2670023 R 272560 CDS YP_108821.1 53719835 3094828 complement(2670822..2671670) 1 NC_006350.1 hypothetical protein 2671670 3094828 BPSL2226 Burkholderia pseudomallei K96243 hypothetical protein YP_108821.1 2670822 R 272560 CDS YP_108822.1 53719836 3094829 complement(2671740..2672618) 1 NC_006350.1 Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiS or b0368 SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 1.6e-30, 35.58% id in 281 aa, and to Streptomyces coelicolor dioxygenase sco7507 or scbac17a6.40C SWALL:Q93J90 (EMBL:AL596248) (315 aa) fasta scores: E(): 8.6e-36, 41.28% id in 281 aa; sulfur metabolism-like protein 2672618 3094829 BPSL2227 Burkholderia pseudomallei K96243 sulfur metabolism-like protein YP_108822.1 2671740 R 272560 CDS YP_108823.1 53719837 3091821 complement(2672623..2673420) 1 NC_006350.1 Very low similarity to Bacillus halodurans hypothetical protein bh3371 SWALL:Q9K7J0 (EMBL:AP001518) (255 aa) fasta scores: E(): 4.5e-06, 25.41% id in 244 aa; hypothetical protein 2673420 3091821 BPSL2228 Burkholderia pseudomallei K96243 hypothetical protein YP_108823.1 2672623 R 272560 CDS YP_108824.1 53719838 3091822 complement(2673417..2682440) 1 NC_006350.1 Similar to Pseudomonas putida siderophore non-ribosomal peptide synthetase PpsD SWALL:Q9AKS6 (EMBL:AJ310530) (2246 aa) fasta scores: E(): 4.8e-102, 28.54% id in 2659 aa, and to the C-terminal region of Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 1.5e-94, 27.02% id in 3648 aa; siderophore non-ribosomal peptide synthase 2682440 3091822 BPSL2229 Burkholderia pseudomallei K96243 siderophore non-ribosomal peptide synthase YP_108824.1 2673417 R 272560 CDS YP_108825.1 53719839 3093108 complement(2682440..2683840) 1 NC_006350.1 Similar to Agrobacterium tumefaciens hypothetical protein atu3925 or agr_l_1841 SWALL:Q8U905 (EMBL:AE009323) (462 aa) fasta scores: E(): 6.5e-41, 33.47% id in 454 aa, and to Xanthomonas campestris hypothetical protein xcc4027 SWALL:AAM43248 (EMBL:AE012524) (463 aa) fasta scores: E(): 2.6e-40, 36.55% id in 465 aa; hypothetical protein 2683840 3093108 BPSL2230 Burkholderia pseudomallei K96243 hypothetical protein YP_108825.1 2682440 R 272560 CDS YP_108826.1 53719840 3093109 complement(2684134..2685435) 1 NC_006350.1 Similar to Rhizobium meliloti transport transmembrane protein r00235 or smc02910 SWALL:Q92SW7 (EMBL:AL591783) (551 aa) fasta scores: E(): 2e-53, 42.99% id in 407 aa, and to Agrobacterium tumefaciens MFS permease atu0091 or agr_c_139 SWALL:Q8UJ47 (EMBL:AE008983) (542 aa) fasta scores: E(): 2.2e-51, 40.24% id in 410 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein 2685435 3093109 BPSL2231 Burkholderia pseudomallei K96243 hypothetical protein YP_108826.1 2684134 R 272560 CDS YP_108827.1 53719841 3093087 complement(2685503..2687395) 1 NC_006350.1 Similar to the C-terminal region of Ralstonia solanacearum probable peptide synthetase rsp0641 or rs05860 SWALL:Q8XS40 (EMBL:AL646079) (6889 aa) fasta scores: E(): 3.1e-51, 36.47% id in 584 aa, and to the N-terminal region of Agrobacterium tumefaciens peptide synthetase atu3072 or agr_l_3476 SWALL:Q8UBE4 (EMBL:AE009238) (1344 aa) fasta scores: E(): 2.1e-50, 36.73% id in 569 aa; non-ribosomal peptide synthase 2687395 3093087 BPSL2232 Burkholderia pseudomallei K96243 non-ribosomal peptide synthase YP_108827.1 2685503 R 272560 CDS YP_108828.1 53719842 3093088 complement(2687392..2688891) 1 NC_006350.1 Similar to the C-terminal region of Xylella fastidiosa CysN/CysC bifunctional enzyme CysNC or xf1501 SWALL:CYSN_XYLFA (SWALL:Q9PD78) (623 aa) fasta scores: E(): 9.4e-26, 52.19% id in 205 aa, and to in its C-terminal region similar to the full length of Escherichia coli, and Escherichia coli O157:H7 adenylylsulfate kinase CysC or b2750 or z4058 or ecs3604 SWALL:CYSC_ECOLI (SWALL:P23846) (200 aa) fasta scores: E(): 3.4e-23, 49.7% id in 167 aa; adenylylsulfate kinase 2688891 3093088 BPSL2233 Burkholderia pseudomallei K96243 adenylylsulfate kinase YP_108828.1 2687392 R 272560 CDS YP_108829.1 53719843 3093295 2690294..2691574 1 NC_006350.1 Similar to Escherichia coli hypothetical protein precursor YegM or b2074 SWALL:YEGM_ECOLI (SWALL:P76397) (415 aa) fasta scores: E(): 2.5e-37, 36.29% id in 405 aa, and to Rhizobium loti RND efflux membrane fusion protein mll5780 SWALL:Q98B05 (EMBL:AP003007) (417 aa) fasta scores: E(): 1.5e-35, 34.54% id in 414 aa; hypothetical protein 2691574 3093295 BPSL2234 Burkholderia pseudomallei K96243 hypothetical protein YP_108829.1 2690294 D 272560 CDS YP_108830.1 53719844 3093296 2691571..2694717 1 NC_006350.1 Weakly similar to Escherichia coli probable aminoglycoside efflux pump AcrD or b2470 SWALL:ACRD_ECOLI (SWALL:P24177) (1037 aa) fasta scores: E(): 8.3e-76, 28.27% id in 1054 aa. Similar to Rhizobium loti Rnd efflux transporter mll5779 SWALL:Q98B06 (EMBL:AP003007) (1038 aa) fasta scores: E(): 1.9e-187, 51.79% id in 1029 aa; AcrB/AcrD/AcrF family membrane protein 2694717 3093296 BPSL2235 Burkholderia pseudomallei K96243 AcrB/AcrD/AcrF family membrane protein YP_108830.1 2691571 D 272560 CDS YP_108831.1 53719845 3092819 2694795..2696015 1 NC_006350.1 Similar to Streptomyces coelicolor integral membrane efflux protein sco1892 or sci7.10 SWALL:Q9X9Y0 (EMBL:AL096743) (415 aa) fasta scores: E(): 9.9e-07, 28.76% id in 379 aa, and to Thermotoga maritima permease, tm1336 SWALL:Q9X158 (EMBL:AE001788) (390 aa) fasta scores: E(): 6e-05, 19.3% id in 373 aa; hypothetical protein 2696015 3092819 BPSL2236 Burkholderia pseudomallei K96243 hypothetical protein YP_108831.1 2694795 D 272560 CDS YP_108832.1 53719846 3092820 complement(2696054..2697886) 1 NC_006350.1 Similar to Xanthomonas campestris lipase/esterase EstA or xcc3148 SWALL:Q8P634 (EMBL:AE012430) (594 aa) fasta scores: E(): 7e-14, 23.28% id in 627 aa, and to Xylella fastidiosa lipase/esterase xf0781 SWALL:Q9PF97 (EMBL:AE003919) (597 aa) fasta scores: E(): 1.3e-10, 23.29% id in 631 aa; exported lipase 2697886 3092820 BPSL2237 Burkholderia pseudomallei K96243 exported lipase YP_108832.1 2696054 R 272560 CDS YP_108833.1 53719847 3092664 complement(2698089..2699135) 1 NC_006350.1 Similar to Vibrio cholerae hypothetical protein vc0334 SWALL:Q9KV24 (EMBL:AE004122) (319 aa) fasta scores: E(): 1.8e-36, 38.48% id in 317 aa; hypothetical protein 2699135 3092664 BPSL2238 Burkholderia pseudomallei K96243 hypothetical protein YP_108833.1 2698089 R 272560 CDS YP_108834.1 53719848 3094028 complement(2700393..2701643) 1 NC_006350.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2701643 ask 3094028 ask Burkholderia pseudomallei K96243 aspartate kinase YP_108834.1 2700393 R 272560 CDS YP_108835.1 53719849 3092665 complement(2701984..2703453) 1 NC_006350.1 Similar to Escherichia coli cell cycle protein MesJ or b0188 SWALL:MESJ_ECOLI (SWALL:P52097) (432 aa) fasta scores: E(): 1.2e-30, 35.79% id in 447 aa, and to Ralstonia solanacearum cell cycle protein rsc1170 or rs04559 SWALL:Q8Y074 (EMBL:AL646063) (462 aa) fasta scores: E(): 1.7e-42, 43.91% id in 485 aa; cell cycle protein 2703453 3092665 BPSL2240 Burkholderia pseudomallei K96243 cell cycle protein YP_108835.1 2701984 R 272560 CDS YP_108836.1 53719850 3092968 complement(2703497..2704468) 1 NC_006350.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 2704468 accA 3092968 accA Burkholderia pseudomallei K96243 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_108836.1 2703497 R 272560 CDS YP_108837.1 53719851 3093297 complement(2704572..2705510) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1168 or rs04576 SWALL:Q8Y076 (EMBL:AL646063) (291 aa) fasta scores: E(): 1.1e-56, 62.62% id in 313 aa, and to Deinococcus radiodurans DNA-3-methyladenine glycosidase II, dr2584 SWALL:Q9RRB0 (EMBL:AE002087) (225 aa) fasta scores: E(): 6.8e-15, 37.2% id in 215 aa; HhH-GPD superfamily base excision DNA repair protein 2705510 3093297 BPSL2242 Burkholderia pseudomallei K96243 HhH-GPD superfamily base excision DNA repair protein YP_108837.1 2704572 R 272560 CDS YP_108838.1 53719852 3093095 complement(2705558..2706955) 1 NC_006350.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2706955 cysS 3093095 cysS Burkholderia pseudomallei K96243 cysteinyl-tRNA synthetase YP_108838.1 2705558 R 272560 CDS YP_108839.1 53719853 3093298 2707244..2707909 1 NC_006350.1 Low similarity to Ralstonia solanacearum probable signal peptide protein rsc1166 or rs04578 SWALL:Q8Y078 (EMBL:AL646063) (219 aa) fasta scores: E(): 5.3e-19, 44.62% id in 186 aa; hypothetical protein 2707909 3093298 BPSL2244 Burkholderia pseudomallei K96243 hypothetical protein YP_108839.1 2707244 D 272560 CDS YP_108840.1 53719854 3094185 2707966..2708541 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 peptidyl-prolyl cis-trans isomerase A precursor PpiA or RotA or Rot or b3363 or c4138 or z4724 or ecs4214 SWALL:PPIA_ECOLI (SWALL:P20752) (190 aa) fasta scores: E(): 1.1e-30, 53.43% id in 189 aa, and to Ralstonia solanacearum probable peptidyl-prolyl cis-trans isomerase A rsc1165 or rs04579 SWALL:Q8Y079 (EMBL:AL646063) (190 aa) fasta scores: E(): 7.5e-37, 60.45% id in 177 aa. Note This CDS is also highly similar to the downstream CDS, BPSL2246 (164 aa) fasta scores: E(): 8.3e-33, 60.736% identity in 163 aa overlap; peptidyl-prolyl cis-trans isomerase A 2708541 ppiA 3094185 ppiA Burkholderia pseudomallei K96243 peptidyl-prolyl cis-trans isomerase A YP_108840.1 2707966 D 272560 CDS YP_108841.1 53719855 3094186 2708622..2709113 1 NC_006350.1 Similar to Escherichia coli peptidyl-prolyl cis-trans isomerase B PpiB or b0525 SWALL:PPIB_ECOLI (SWALL:P23869) (164 aa) fasta scores: E(): 1.9e-41, 66.66% id in 162 aa, and to Pseudomonas aeruginosa peptidyl-prolyl cis-trans isomerase B pa1793 SWALL:Q9I2U9 (EMBL:AE004605) (165 aa) fasta scores: E(): 3e-47, 72.39% id in 163 aa. Note: This CDS is higly similar to the upstream CDS, BPSL2245 (192 aa) fasta scores: E(): 9.4e-36, 60.736% identity in 163 aa overlap; peptidyl-prolyl cis-trans isomerase B 2709113 ppiB 3094186 ppiB Burkholderia pseudomallei K96243 peptidyl-prolyl cis-trans isomerase B YP_108841.1 2708622 D 272560 CDS YP_108842.1 53719856 3094136 2709177..2709938 1 NC_006350.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 2709938 3094136 BPSL2247 Burkholderia pseudomallei K96243 UDP-2,3-diacylglucosamine hydrolase YP_108842.1 2709177 D 272560 CDS YP_108843.1 53719857 3094137 complement(2710271..2711056) 1 NC_006350.1 Similar to Bacillus subtilis serine acetyltransferase CysE or CysA SWALL:CYSE_BACSU (SWALL:Q06750) (217 aa) fasta scores: E(): 4.3e-31, 57.89% id in 171 aa, and to Pseudomonas aeruginosa O-acetylserine synthase pa3816 SWALL:Q9HXI6 (EMBL:AE004799) (258 aa) fasta scores: E(): 1.7e-46, 56.92% id in 267 aa; serine acetyltransferase 2711056 3094137 BPSL2248 Burkholderia pseudomallei K96243 serine acetyltransferase YP_108843.1 2710271 R 272560 CDS YP_108844.1 53719858 3093206 complement(2711247..2712158) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O6 hypothetical tRNA/rRNA methyltransferase YfhQ or b2532 or c3058 SWALL:YFHQ_ECOLI (SWALL:P77438) (246 aa) fasta scores: E(): 2.8e-30, 44.03% id in 243 aa, and to Ralstonia solanacearum tRNA/rRNA methyltransferase rsc1161 or rs04590 SWALL:Q8Y083 (EMBL:AL646063) (287 aa) fasta scores: E(): 5.7e-47, 55.47% id in 283 aa; tRNA/rRNA methyltransferase 2712158 3093206 BPSL2249 Burkholderia pseudomallei K96243 tRNA/rRNA methyltransferase YP_108844.1 2711247 R 272560 CDS YP_108845.1 53719859 3092894 2712459..2713262 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 inositol-1-monophosphatase SuhB or SsyA SWALL:SUHB_ECOLI (SWALL:P22783) (267 aa) fasta scores: E(): 1.7e-47, 51.96% id in 254 aa, and to Ralstonia solanacearum probable inositol monophosphatase rsc1160 or rs04755 SWALL:Q8Y084 (EMBL:AL646063) (270 aa) fasta scores: E(): 2.7e-70, 68.16% id in 267 aa; inositol monophosphatase 2713262 suhB 3092894 suhB Burkholderia pseudomallei K96243 inositol monophosphatase YP_108845.1 2712459 D 272560 CDS YP_108846.1 53719860 3093207 complement(2713542..2713814) 1 NC_006350.1 Similar to Escherichia coli shiga-like toxin IIe variant B subunit SWALL:P71294 (EMBL:U72191) (87 aa) fasta scores: E(): 1, 29.54% id in 88 aa; hypothetical protein 2713814 3093207 BPSL2251 Burkholderia pseudomallei K96243 hypothetical protein YP_108846.1 2713542 R 272560 CDS YP_108847.1 53719861 3094284 2715154..2717826 1 NC_006350.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2717826 mutS 3094284 mutS Burkholderia pseudomallei K96243 DNA mismatch repair protein MutS YP_108847.1 2715154 D 272560 CDS YP_108848.1 53719862 3091961 2717813..2719111 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1150 or rs04601 SWALL:Q8Y094 (EMBL:AL646063) (354 aa) fasta scores: E(): 4.6e-33, 36.13% id in 357 aa. CDS is extended at the C-terminus in comparison to R. solanacearum protein; hypothetical protein 2719111 3091961 BPSL2253 Burkholderia pseudomallei K96243 hypothetical protein YP_108848.1 2717813 D 272560 CDS YP_108849.1 53719863 3091962 complement(2719091..2719636) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 FkbP-type peptidyl-prolyl cis-trans isomerase SlyD SWALL:SLYD_ECOLI (SWALL:P30856) (196 aa) fasta scores: E(): 1.3e-16, 38.41% id in 177 aa, and to Ralstonia solanacearum probable FkbP-type peptidyl-prolyl cis-trans isomerase rsc1149 or rs04602 SWALL:Q8Y095 (EMBL:AL646063) (174 aa) fasta scores: E(): 7.1e-50, 77.34% id in 181 aa; FkbP-type peptidyl-prolyl cis-trans isomerase 2719636 3091962 BPSL2254 Burkholderia pseudomallei K96243 FkbP-type peptidyl-prolyl cis-trans isomerase YP_108849.1 2719091 R 272560 CDS YP_108850.1 53719864 3092468 2719729..2720892 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1148 or rs04604 SWALL:Q8Y096 (EMBL:AL646063) (409 aa) fasta scores: E(): 3.9e-79, 52.17% id in 391 aa, and to Salmonella typhimurium cytoplasmic protein stm1229 SWALL:Q8ZPZ7 (EMBL:AE008753) (373 aa) fasta scores: E(): 5.6e-39, 35.5% id in 383 aa. Possible alternative translational start site; hypothetical protein 2720892 3092468 BPSL2255 Burkholderia pseudomallei K96243 hypothetical protein YP_108850.1 2719729 D 272560 CDS YP_108851.1 53719865 3092469 2721124..2721378 1 NC_006350.1 Similar to Neisseria gonorrhoeae outer membrane protein H.8 precursor SWALL:H82_NEIGO (SWALL:P11910) (88 aa) fasta scores: E(): 0.023, 43.9% id in 82 aa, and to Acinetobacter sp. hypothetical protein SWALL:Q6F875 (EMBL:CR543861) (88 aa) fasta scores: E(): 0.011, 47.56% id in 82 aa; lipoprotein 2721378 3092469 BPSL2255A Burkholderia pseudomallei K96243 lipoprotein YP_108851.1 2721124 D 272560 CDS YP_108852.1 53719866 3092579 complement(2721619..2722395) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1147 or rs04606 SWALL:Q8Y097 (EMBL:AL646062) (261 aa) fasta scores: E(): 8.7e-53, 58.91% id in 258 aa, and to Pseudomonas aeruginosa hypothetical protein pa1012 SWALL:Q9I4W1 (EMBL:AE004533) (252 aa) fasta scores: E(): 6.8e-38, 46.85% id in 254 aa; hypothetical protein 2722395 3092579 BPSL2256 Burkholderia pseudomallei K96243 hypothetical protein YP_108852.1 2721619 R 272560 CDS YP_108853.1 53719867 3092580 complement(2722400..2723542) 1 NC_006350.1 Similar to Escherichia coli lipoprotein-34 precursor NlpB or DapX SWALL:NLPB_ECOLI (SWALL:P21167) (344 aa) fasta scores: E(): 0.11, 23.29% id in 395 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1146 or rs04607 SWALL:Q8Y098 (EMBL:AL646062) (398 aa) fasta scores: E(): 4.9e-35, 42.21% id in 398 aa; lipoprotein 2723542 3092580 BPSL2257 Burkholderia pseudomallei K96243 lipoprotein YP_108853.1 2722400 R 272560 CDS YP_108854.1 53719868 3094346 complement(2723653..2724555) 1 NC_006350.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2724555 dapA 3094346 dapA Burkholderia pseudomallei K96243 dihydrodipicolinate synthase YP_108854.1 2723653 R 272560 CDS YP_108855.1 53719869 3093615 complement(2724600..2725217) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1144 or rs04609 SWALL:Q8Y0A0 (EMBL:AL646062) (190 aa) fasta scores: E(): 1.1e-37, 61.08% id in 185 aa; hypothetical protein 2725217 3093615 BPSL2259 Burkholderia pseudomallei K96243 hypothetical protein YP_108855.1 2724600 R 272560 CDS YP_108856.1 53719870 3093616 complement(2725214..2726416) 1 NC_006350.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2726416 3093616 BPSL2260 Burkholderia pseudomallei K96243 tryptophanyl-tRNA synthetase YP_108856.1 2725214 R 272560 CDS YP_108857.1 53719871 3093628 complement(2726425..2727090) 1 NC_006350.1 Similar to Ralstonia solanacearum probable integral membrane transmembrane protein rsc1142 or rs04611 SWALL:Q8Y0A2 (EMBL:AL646062) (225 aa) fasta scores: E(): 9.8e-49, 56.33% id in 213 aa, and to Neisseria meningitidis conserved hypothetical integral membrane protein nma1986 SWALL:Q9JT39 (EMBL:AL162757) (212 aa) fasta scores: E(): 1.6e-25, 40.67% id in 209 aa; hypothetical protein 2727090 3093628 BPSL2261 Burkholderia pseudomallei K96243 hypothetical protein YP_108857.1 2726425 R 272560 CDS YP_108858.1 53719872 3093629 complement(2727189..2727818) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1141 or rs04612 SWALL:Q8Y0A3 (EMBL:AL646062) (207 aa) fasta scores: E(): 7.5e-57, 70.53% id in 207 aa, and to Pseudomonas aeruginosa hypothetical protein pa3199 SWALL:Q9HZ41 (EMBL:AE004744) (209 aa) fasta scores: E(): 3.7e-47, 60.97% id in 205 aa; hypothetical protein 2727818 3093629 BPSL2262 Burkholderia pseudomallei K96243 hypothetical protein YP_108858.1 2727189 R 272560 CDS YP_108859.1 53719873 3094473 complement(2727883..2728722) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1140 or rs04613 SWALL:Q8Y0A4 (EMBL:AL646062) (286 aa) fasta scores: E(): 9.8e-76, 70.65% id in 276 aa, and to Neisseria meningitidis hypothetical protein nmb1824 SWALL:Q9JXZ5 (EMBL:AE002531) (278 aa) fasta scores: E(): 5.8e-44, 47.98% id in 273 aa; hypothetical protein 2728722 3094473 BPSL2263 Burkholderia pseudomallei K96243 hypothetical protein YP_108859.1 2727883 R 272560 CDS YP_108860.1 53719874 3094474 complement(2728968..2729858) 1 NC_006350.1 Similar to Ralstonia solanacearum hydrolase rsc1135 or rs04618 SWALL:Q8Y0A9 (EMBL:AL646062) (307 aa) fasta scores: E(): 5e-79, 65.51% id in 290 aa, and to Xanthomonas campestris hydrolase xcc4096 SWALL:AAM43317 (EMBL:AE012532) (290 aa) fasta scores: E(): 2.8e-11, 30.99% id in 271 aa; hydrolase 2729858 3094474 BPSL2264 Burkholderia pseudomallei K96243 hydrolase YP_108860.1 2728968 R 272560 CDS YP_108861.1 53719875 3092946 complement(2730013..2730864) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1134 or rs04619 SWALL:Q8Y0B0 (EMBL:AL646062) (268 aa) fasta scores: E(): 1.1e-64, 67.8% id in 264 aa, and to Xanthomonas axonopodis hypothetical protein xac1033 SWALL:AAM35916 (EMBL:AE011733) (274 aa) fasta scores: E(): 8.7e-50, 52.69% id in 260 aa. Possible alternative translational start site; hypothetical protein 2730864 3092946 BPSL2265 Burkholderia pseudomallei K96243 hypothetical protein YP_108861.1 2730013 R 272560 CDS YP_108862.1 53719876 3092947 2731041..2731565 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1133 or rs04620 SWALL:Q8Y0B1 (EMBL:AL646062) (175 aa) fasta scores: E(): 3.9e-46, 69.36% id in 173 aa, and to Caulobacter crescentus bacterial transferase cc2643 SWALL:Q9A526 (EMBL:AE005932) (176 aa) fasta scores: E(): 6e-33, 54.65% id in 161 aa; hypothetical protein 2731565 3092947 BPSL2266 Burkholderia pseudomallei K96243 hypothetical protein YP_108862.1 2731041 D 272560 CDS YP_108863.1 53719877 3094227 2731604..2732554 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 33 kDa chaperonin HslO SWALL:HSLO_ECOLI (SWALL:P45803) (292 aa) fasta scores: E(): 5.6e-13, 35.84% id in 318 aa, and to Ralstonia solanacearum redox regulated molecular chaperone heat-shock-like protein rsc1132 or rs04621 SWALL:Q8Y0B2 (EMBL:AL646062) (338 aa) fasta scores: E(): 2.1e-46, 57.35% id in 340 aa; Hsp33 chaperonin 2732554 3094227 BPSL2267 Burkholderia pseudomallei K96243 Hsp33 chaperonin YP_108863.1 2731604 D 272560 CDS YP_108864.1 53719878 3094228 2732638..2732985 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1131 or rs04622 SWALL:Q8Y0B3 (EMBL:AL646062) (137 aa) fasta scores: E(): 4.3e-08, 40% id in 130 aa. Possible alternative upstream translational start site; lipoprotein 2732985 3094228 BPSL2268 Burkholderia pseudomallei K96243 lipoprotein YP_108864.1 2732638 D 272560 CDS YP_108865.1 53719879 3091612 complement(2733211..2733642) 1 NC_006350.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 2733642 ftsB 3091612 ftsB Burkholderia pseudomallei K96243 cell division protein FtsB YP_108865.1 2733211 R 272560 CDS YP_108866.1 53719880 3091594 complement(2733734..2735017) 1 NC_006350.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2735017 eno 3091594 eno Burkholderia pseudomallei K96243 phosphopyruvate hydratase YP_108866.1 2733734 R 272560 CDS YP_108867.1 53719881 3091613 complement(2735121..2735975) 1 NC_006350.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2735975 3091613 BPSL2271 Burkholderia pseudomallei K96243 2-dehydro-3-deoxyphosphooctonate aldolase YP_108867.1 2735121 R 272560 CDS YP_108868.1 53719882 3091437 complement(2735972..2737633) 1 NC_006350.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2737633 pyrG 3091437 pyrG Burkholderia pseudomallei K96243 CTP synthetase YP_108868.1 2735972 R 272560 CDS YP_108869.1 53719883 3092011 complement(2737890..2738717) 1 NC_006350.1 Similar to Ralstonia solanacearum hydrolase rsc1125 or rs04628 SWALL:Q8Y0B9 (EMBL:AL646062) (273 aa) fasta scores: E(): 1.6e-63, 58.88% id in 270 aa. Weakly similar to the C-terminal region of Mus musculus monoglyceride lipase MGLL SWALL:O35678 (EMBL:AJ001118) (303 aa) fasta scores: E(): 0.015, 25.96% id in 285 aa; hypothetical protein 2738717 3092011 BPSL2273 Burkholderia pseudomallei K96243 hypothetical protein YP_108869.1 2737890 R 272560 CDS YP_108870.1 53719884 3092012 complement(2738754..2741324) 1 NC_006350.1 C-terminal region is similar to Neisseria gonorrhoeae competence protein ComA SWALL:COMA_NEIGO (SWALL:P51973) (691 aa) fasta scores: E(): 3.6e-18, 35.73% id in 778 aa> Full length CDS is similar to Xanthomonas campestris DNA uptake/competence protein xcc2123 SWALL:AAM41408 (EMBL:AE012319) (796 aa) fasta scores: E(): 7.5e-29, 38.66% id in 869 aa; hypothetical protein 2741324 3092012 BPSL2274 Burkholderia pseudomallei K96243 hypothetical protein YP_108870.1 2738754 R 272560 CDS YP_108871.1 53719885 3093213 complement(2741335..2742123) 1 NC_006350.1 Similar to Ralstonia solanacearum probable deoxyribonuclease rsc1119 or rs04635 SWALL:Q8Y0C5 (EMBL:AL646062) (271 aa) fasta scores: E(): 1.3e-56, 58.64% id in 266 aa, and to Xanthomonas campestris hypothetical protein xcc1426 SWALL:AAM40723 (EMBL:AE012242) (255 aa) fasta scores: E(): 4.4e-33, 41.17% id in 255 aa; TatD related DNase 2742123 3093213 BPSL2275 Burkholderia pseudomallei K96243 TatD related DNase YP_108871.1 2741335 R 272560 CDS YP_108872.1 53719886 3091587 complement(2742128..2742850) 1 NC_006350.1 Similar to Escherichia coli lipoprotein releasing system ATP-binding protein LolD SWALL:LOLD_ECOLI (SWALL:P75957) (233 aa) fasta scores: E(): 4.5e-38, 56.75% id in 222 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa2987 SWALL:Q9HZL7 (EMBL:AE004724) (227 aa) fasta scores: E(): 6.6e-41, 62.55% id in 219 aa; lipoprotein releasing system ATP-binding protein 2742850 lolD 3091587 lolD Burkholderia pseudomallei K96243 lipoprotein releasing system ATP-binding protein YP_108872.1 2742128 R 272560 CDS YP_108873.1 53719887 3093214 complement(2742870..2744123) 1 NC_006350.1 Similar to Escherichia coli lipoprotein releasing system transmembrane protein LolE SWALL:LOLE_ECOLI (SWALL:P75958) (413 aa) fasta scores: E(): 1.3e-42, 34.54% id in 414 aa, and to Ralstonia solanacearum probable lipoprotein releasing system transmembrane rsc1117 or rs05757 SWALL:Q8Y0C7 (EMBL:AL646062) (416 aa) fasta scores: E(): 1.4e-112, 71.46% id in 417 aa; lipoprotein releasing system transmembrane protein 2744123 3093214 BPSL2277 Burkholderia pseudomallei K96243 lipoprotein releasing system transmembrane protein YP_108873.1 2742870 R 272560 CDS YP_108874.1 53719888 3092074 2744691..2745767 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc1116 or rs05756 SWALL:Q8Y0C8 (EMBL:AL646062) (359 aa) fasta scores: E(): 7.6e-36, 44.16% id in 351 aa, and to Xanthomonas campestris, and Xanthomonas campestris regulatory protein xcc1845 SWALL:AAM41134 (EMBL:AJ245997) (306 aa) fasta scores: E(): 7.8e-12, 32.01% id in 328 aa; hypothetical protein 2745767 3092074 BPSL2278 Burkholderia pseudomallei K96243 hypothetical protein YP_108874.1 2744691 D 272560 CDS YP_108875.1 53719889 3092075 2745783..2747477 1 NC_006350.1 Similar to Escherichia coli single-stranded-DNA-specific exonuclease RecJ SWALL:RECJ_ECOLI (SWALL:P21893) (577 aa) fasta scores: E(): 1.4e-93, 49.18% id in 555 aa, and to Ralstonia solanacearum probable single-stranded-DNA-specific exonuclease rsc1115 or rs05755 SWALL:Q8Y0C9 (EMBL:AL646062) (565 aa) fasta scores: E(): 4.1e-152, 69.13% id in 567 aa; single-stranded-DNA-specific exonuclease 2747477 3092075 BPSL2279 Burkholderia pseudomallei K96243 single-stranded-DNA-specific exonuclease YP_108875.1 2745783 D 272560 CDS YP_108876.1 53719890 3093204 join(2747838..2747918,2747920..2748942) 1 NC_006350.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 2748942 prfB 3093204 prfB Burkholderia pseudomallei K96243 peptide chain release factor 2 YP_108876.1 2747838 D 272560 CDS YP_108877.1 53719891 3092883 2749035..2750561 1 NC_006350.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2750561 lysS 3092883 lysS Burkholderia pseudomallei K96243 lysyl-tRNA synthetase YP_108877.1 2749035 D 272560 CDS YP_108878.1 53719892 3092259 2750912..2751637 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1027 or rs04225 SWALL:Q8Y0L6 (EMBL:AL646062) (250 aa) fasta scores: E(): 5.2e-23, 48.29% id in 234 aa, and to Ralstonia solanacearum glycin-rich transmembrane protein rsp0506 or rs00385 SWALL:Q8XSH0 (EMBL:AL646079) (222 aa) fasta scores: E(): 1.1e-06, 29.69% id in 229 aa. Possible alternative translational start site; hypothetical protein 2751637 3092259 BPSL2282 Burkholderia pseudomallei K96243 hypothetical protein YP_108878.1 2750912 D 272560 CDS YP_108879.1 53719893 3092260 complement(2752073..2752282) 1 NC_006350.1 Similar to Vibrio cholerae hypothetical protein vc0754 SWALL:Q9KTX6 (EMBL:AE004160) (64 aa) fasta scores: E(): 3.2e-15, 64.51% id in 62 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein b2524 or z3791 or ecs3390 SWALL:YFHJ_ECOLI (SWALL:P37096) (66 aa) fasta scores: E(): 2.3e-14, 62.5% id in 64 aa; hypothetical protein 2752282 3092260 BPSL2283 Burkholderia pseudomallei K96243 hypothetical protein YP_108879.1 2752073 R 272560 CDS YP_108880.1 53719894 3094860 complement(2752301..2752642) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ferredoxin, 2Fe-2S Fdx SWALL:FER_ECOLI (SWALL:P25528) (110 aa) fasta scores: E(): 5.2e-30, 68.46% id in 111 aa, and to Ralstonia solanacearum probable ferredoxin rsc1025 or rs04229 SWALL:Q8Y0L8 (EMBL:AL646062) (112 aa) fasta scores: E(): 9.5e-33, 75.22% id in 113 aa; (2Fe-2S) ferredoxin 2752642 fdx 3094860 fdx Burkholderia pseudomallei K96243 (2Fe-2S) ferredoxin YP_108880.1 2752301 R 272560 CDS YP_108881.1 53719895 3092392 complement(2752735..2754603) 1 NC_006350.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 2754603 hscA 3092392 hscA Burkholderia pseudomallei K96243 chaperone protein HscA YP_108881.1 2752735 R 272560 CDS YP_108882.1 53719896 3094409 complement(2754661..2755188) 1 NC_006350.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 2755188 hscB 3094409 hscB Burkholderia pseudomallei K96243 co-chaperone HscB YP_108882.1 2754661 R 272560 CDS YP_108883.1 53719897 3094410 complement(2755301..2755624) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1021 rsc1021 or rs04236 SWALL:Q8Y0M2 (EMBL:AL646062) (106 aa) fasta scores: E(): 4e-34, 84.76% id in 105 aa, and to Pasteurella multocida hypothetical protein Pm0320 pm0320 SWALL:Q9CNV4 (EMBL:AE006068) (107 aa) fasta scores: E(): 1.4e-31, 75.7% id in 107 aa; HesB family protein 2755624 3094410 BPSL2287 Burkholderia pseudomallei K96243 HesB family protein YP_108883.1 2755301 R 272560 CDS YP_108884.1 53719898 3092118 complement(2755707..2756114) 1 NC_006350.1 Similar to Ralstonia solanacearum probable NifU protein rsc1020 or rs04249 SWALL:Q8Y0M3 (EMBL:AL646062) (133 aa) fasta scores: E(): 1.5e-43, 88.06% id in 134 aa, and to Neisseria meningitidis NifU protein nmb1380 SWALL:Q9JYX9 (EMBL:AE002486) (128 aa) fasta scores: E(): 3.6e-41, 82.54% id in 126 aa; scaffold protein 2756114 3092118 BPSL2288 Burkholderia pseudomallei K96243 scaffold protein YP_108884.1 2755707 R 272560 CDS YP_108885.1 53719899 3094249 complement(2756180..2757403) 1 NC_006350.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 2757403 iscS 3094249 iscS Burkholderia pseudomallei K96243 cysteine desulfurase YP_108885.1 2756180 R 272560 CDS YP_108886.1 53719900 3092119 complement(2757472..2758011) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1018 or rs04257 SWALL:Q8Y0M5 (EMBL:AL646062) (193 aa) fasta scores: E(): 2.4e-48, 73.86% id in 199 aa, and to Pseudomonas aeruginosa hypothetical protein pa3815 SWALL:Q9HXI7 (EMBL:AE004799) (163 aa) fasta scores: E(): 2.2e-27, 55.26% id in 152 aa; hypothetical protein 2758011 3092119 BPSL2290 Burkholderia pseudomallei K96243 hypothetical protein YP_108886.1 2757472 R 272560 CDS YP_108887.1 53719901 3091669 complement(2758113..2758592) 1 NC_006350.1 Similar to Schizosaccharomyces pombe low molecular weight phosphotyrosine protein phosphatase STP1 or SPAC1071.12c or SPAC926.01c SWALL:PPAL_SCHPO (SWALL:P41893) (156 aa) fasta scores: E(): 3.1e-19, 44.85% id in 136 aa, and to Pseudomonas aeruginosa phosphotyrosine protein phosphatase pa2978 SWALL:Q9HZM6 (EMBL:AE004723) (154 aa) fasta scores: E(): 1.1e-26, 58.1% id in 148 aa; low molecular weight phosphotyrosine protein phosphatase 2758592 3091669 BPSL2291 Burkholderia pseudomallei K96243 low molecular weight phosphotyrosine protein phosphatase YP_108887.1 2758113 R 272560 CDS YP_108888.1 53719902 3091670 complement(2758684..2758944) 1 NC_006350.1 Weakly similar to the N-terminal region of Pseudomonas glumae lipase chaperone LipB SWALL:LICH_PSEGL (SWALL:Q05490) (353 aa) fasta scores: E(): 10, 40.78% id in 76 aa; hypothetical protein 2758944 3091670 BPSL2292 Burkholderia pseudomallei K96243 hypothetical protein YP_108888.1 2758684 R 272560 CDS YP_108889.1 53719903 3093480 complement(2759055..2760506) 1 NC_006350.1 Similar to Ralstonia solanacearum iron-sulfur binding protein rsc1612 or rs03975 SWALL:Q8XYZ4 (EMBL:AL646065) (469 aa) fasta scores: E(): 7.4e-134, 75.31% id in 474 aa, and to Bacillus halodurans hypothetical protein bh1833 SWALL:Q9KBU1 (EMBL:AP001513) (485 aa) fasta scores: E(): 1.1e-65, 39.95% id in 488 aa; iron-sulfur binding protein 2760506 3093480 BPSL2293 Burkholderia pseudomallei K96243 iron-sulfur binding protein YP_108889.1 2759055 R 272560 CDS YP_108890.1 53719904 3093481 complement(2760648..2761370) 1 NC_006350.1 Similar to Escherichia coli hypothetical protein ykge ykge or b0306 SWALL:YKGE_ECOLI (SWALL:P77252) (239 aa) fasta scores: E(): 1.9e-28, 37.39% id in 238 aa, and to Ralstonia solanacearum hypothetical protein rsc1611 rsc1611 or rs03974 SWALL:Q8XYZ5 (EMBL:AL646065) (241 aa) fasta scores: E(): 2.7e-76, 78.75% id in 240 aa; hypothetical protein 2761370 3093481 BPSL2294 Burkholderia pseudomallei K96243 hypothetical protein YP_108890.1 2760648 R 272560 CDS YP_108891.1 53719905 3092232 2761553..2762365 1 NC_006350.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsc1610 or rs03973 SWALL:Q8XYZ6 (EMBL:AL646065) (266 aa) fasta scores: E(): 1.3e-78, 84.73% id in 249 aa, and to the C-terminal region of Erwinia chrysanthemi pectin degradation repressor protein KdgR SWALL:KDGR_ERWCH (SWALL:P37728) (305 aa) fasta scores: E(): 3.6e-19, 32.68% id in 257 aa; IclR family transcriptional regulator 2762365 3092232 BPSL2295 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_108891.1 2761553 D 272560 CDS YP_108892.1 53719906 3092233 complement(2762495..2763958) 1 NC_006350.1 Similar to Thermoanaerobacter tengcongensis transposase TTE0846 SWALL:Q8RBH2 (EMBL:AE013051) (492 aa) fasta scores: E(): 7e-74, 43.32% id in 457 aa, and to Pseudomonas sp. transposase TnpA SWALL:Q936Y1 (EMBL:U66917) (456 aa) fasta scores: E(): 2.5e-32, 31.23% id in 477 aa; transposase 2763958 3092233 BPSL2296 Burkholderia pseudomallei K96243 transposase YP_108892.1 2762495 R 272560 CDS YP_108893.1 53719907 3091882 complement(2764077..2765156) 1 NC_006350.1 Similar to the C-terminus of Escherichia coli penicillin-binding protein 7 precursor PbpG SWALL:PBP7_ECOLI (SWALL:P33364) (313 aa) fasta scores: E(): 6.5e-40, 47.84% id in 278 aa, and to the full length Ralstonia solanacearum D-alanyl-D-alanine-endopeptidase rsc1609 or rs03972 SWALL:Q8XYZ7 (EMBL:AL646065) (375 aa) fasta scores: E(): 5.4e-63, 55.52% id in 353 aa; peptidase 2765156 3091882 BPSL2297 Burkholderia pseudomallei K96243 peptidase YP_108893.1 2764077 R 272560 CDS YP_108894.1 53719908 3093221 2765868..2766437 1 NC_006350.1 Similar to Alcaligenes eutrophus granule-associated protein (phasin) PhaP SWALL:Q44013 (EMBL:X85729) (192 aa) fasta scores: E(): 1.7e-37, 71.82% id in 181 aa, and to Ralstonia solanacearum hypothetical protein rsc1605 or rs03967 SWALL:Q8XZ01 (EMBL:AL646065) (193 aa) fasta scores: E(): 2.9e-35, 68.5% id in 181 aa; phasin-like protein 2766437 phaP 3093221 phaP Burkholderia pseudomallei K96243 phasin-like protein YP_108894.1 2765868 D 272560 CDS YP_108895.1 53719909 3091883 complement(2766719..2768488) 1 NC_006350.1 C-terminal region is similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 dihydrolipoamide dehydrogenase LpdA or Lpd SWALL:DLDH_ECOLI (SWALL:P00391) (473 aa) fasta scores: E(): 1.9e-93, 65.75% id in 473 aa. Full length CDS is similar to Ralstonia solanacearum probable dihydrolipoamide dehydrogenase rsc1603 or rs03965 SWALL:Q8XZ03 (EMBL:AL646065) (594 aa) fasta scores: E(): 2.1e-142, 76.88% id in 597 aa; dihydrolipoamide dehydrogenase 2768488 3091883 BPSL2299 Burkholderia pseudomallei K96243 dihydrolipoamide dehydrogenase YP_108895.1 2766719 R 272560 CDS YP_108896.1 53719910 3092156 complement(2768796..2770436) 1 NC_006350.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; dihydrolipoamide acetyltransferase 2770436 pdhB 3092156 pdhB Burkholderia pseudomallei K96243 dihydrolipoamide acetyltransferase YP_108896.1 2768796 R 272560 CDS YP_108897.1 53719911 3093625 complement(2770569..2773265) 1 NC_006350.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 2773265 aceE 3093625 aceE Burkholderia pseudomallei K96243 pyruvate dehydrogenase subunit E1 YP_108897.1 2770569 R 272560 CDS YP_108898.1 53719912 3093892 2773508..2776048 1 NC_006350.1 Weakly similar to Rhodobacter capsulatus C4-dicarboxylate transport sensor protein DctS SWALL:DCTS_RHOCA (SWALL:P37739) (657 aa) fasta scores: E(): 3.1e-26, 30.07% id in 788 aa. Similar to Ralstonia solanacearum probable two-component transmembrane sensor histidine kinase transcription regulator protein rsc1598 or rs03960 SWALL:Q8XZ08 (EMBL:AL646065) (857 aa) fasta scores: E(): 1e-180, 57.72% id in 790 aa; sensor kinase 2776048 3093892 BPSL2302 Burkholderia pseudomallei K96243 sensor kinase YP_108898.1 2773508 D 272560 CDS YP_108899.1 53719913 3093893 2776045..2776683 1 NC_006350.1 Similar to Rhizobium meliloti transcriptional regulatory protein FixJ SWALL:FIXJ_RHIME (SWALL:P10958) (204 aa) fasta scores: E(): 1.7e-23, 45.45% id in 198 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc1597 or rs03959 SWALL:Q8XZ09 (EMBL:AL646065) (210 aa) fasta scores: E(): 4.6e-49, 75.12% id in 205 aa; response regulator protein 2776683 3093893 BPSL2303 Burkholderia pseudomallei K96243 response regulator protein YP_108899.1 2776045 D 272560 CDS YP_108900.1 53719914 3094333 2777000..2777857 1 NC_006350.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2777857 folD 3094333 folD Burkholderia pseudomallei K96243 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_108900.1 2777000 D 272560 CDS YP_108901.1 53719915 3093501 2778566..2780665 1 NC_006350.1 Similar to Escherichia coli oligopeptidase A PrlC or OpdA SWALL:OPDA_ECOLI (SWALL:P27298) (680 aa) fasta scores: E(): 9.6e-133, 49.48% id in 685 aa, and to Ralstonia solanacearum probable oligopeptidase rsc1595 or rs03957 SWALL:Q8XZ11 (EMBL:AL646065) (706 aa) fasta scores: E(): 1.1e-203, 73.12% id in 692 aa. Simlar to BPSS1175, 50.366% identity (50.812% ungapped) in 683 aa overlap; oligopeptidase A 2780665 3093501 BPSL2305 Burkholderia pseudomallei K96243 oligopeptidase A YP_108901.1 2778566 D 272560 CDS YP_108902.2 161723200 3093502 complement(2780897..2782129) 1 NC_006350.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2782129 3093502 BPSL2306 Burkholderia pseudomallei K96243 DNA polymerase IV YP_108902.2 2780897 R 272560 CDS YP_108903.1 53719917 3092694 2782966..2784246 1 NC_006350.1 Similar to Bacillus subtilis nitrite extrusion protein NarK SWALL:NARK_BACSU (SWALL:P46907) (395 aa) fasta scores: E(): 2.2e-27, 29.13% id in 405 aa, and to Pseudomonas aeruginosa nitrate extrusion protein pa3877 SWALL:O54041 (EMBL:Y15252) (431 aa) fasta scores: E(): 8.7e-87, 52.28% id in 415 aa. Similar to BPSS1154, 56.404% identity (56.824% ungapped) in 406 aa overlap; nitrite extrusion protein 2784246 3092694 BPSL2307 Burkholderia pseudomallei K96243 nitrite extrusion protein YP_108903.1 2782966 D 272560 CDS YP_108904.1 53719918 3091539 2784290..2785675 1 NC_006350.1 Similar to Escherichia coli nitrite extrusion protein 1 NarK SWALL:NARK_ECOLI (SWALL:P10903) (463 aa) fasta scores: E(): 4.3e-94, 54.6% id in 456 aa, and to Ralstonia solanacearum probable nitrite/nitrate transporter transmembrane protein rsp0973 or rs02305 SWALL:Q8XR86 (EMBL:AL646082) (461 aa) fasta scores: E(): 8.2e-147, 79.17% id in 461 aa; nitrite extrusion protein 2785675 narK 3091539 narK Burkholderia pseudomallei K96243 nitrite extrusion protein YP_108904.1 2784290 D 272560 CDS YP_108905.1 53719919 3094439 2785926..2789651 1 NC_006350.1 Similar to Escherichia coli respiratory nitrate reductase 1 alpha chain NarG or NarC or BisD SWALL:NARG_ECOLI (SWALL:P09152) (1246 aa) fasta scores: E(): 0, 66.9% id in 1254 aa, and to Ralstonia solanacearum probable respiratory nitrate reductase alpha chain oxidoreductase rsp0974 or rs02306 SWALL:Q8XR85 (EMBL:AL646082) (1245 aa) fasta scores: E(): 0, 87.14% id in 1245 aa. Similar to BPSS1159, 66.534% identity (68.271% ungapped) in 1258 aa overlap; respiratory nitrate reductase subunit alpha 2789651 narG 3094439 narG Burkholderia pseudomallei K96243 respiratory nitrate reductase subunit alpha YP_108905.1 2785926 D 272560 CDS YP_108906.1 53719920 3091538 2789648..2791201 1 NC_006350.1 Similar to Escherichia coli respiratory nitrate reductase 1 beta chain NarH SWALL:NARH_ECOLI (SWALL:P11349) (512 aa) fasta scores: E(): 3.5e-147, 68.72% id in 502 aa, and to Ralstonia solanacearum probable respiratory nitrate reductase oxidoreductase rsp0975 or rs02307 SWALL:Q8XR84 (EMBL:AL646082) (515 aa) fasta scores: E(): 1.3e-182, 85.49% id in 517 aa. Similar to BPSS1158, 73.415% identity (73.415% ungapped) in 489 aa overlap; respiratory nitrate reductase subunit beta 2791201 narH 3091538 narH Burkholderia pseudomallei K96243 respiratory nitrate reductase subunit beta YP_108906.1 2789648 D 272560 CDS YP_108907.1 53719921 3092695 2791225..2791902 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 respiratory nitrate reductase 1 delta chain NarJ SWALL:NARJ_ECOLI (SWALL:P11351) (236 aa) fasta scores: E(): 3.6e-14, 37.28% id in 228 aa, and to Ralstonia solanacearum respiratory nitrate reductase oxidoreductase narj or rsp0976 or rs02308 SWALL:Q8XR83 (EMBL:AL646082) (226 aa) fasta scores: E(): 7.3e-47, 64.57% id in 223 aa; respiratory nitrate reductase delta chain 2791902 3092695 BPSL2311 Burkholderia pseudomallei K96243 respiratory nitrate reductase delta chain YP_108907.1 2791225 D 272560 CDS YP_108908.1 53719922 3093307 2791939..2792625 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 respiratory nitrate reductase 2 gamma chain NarV SWALL:NARV_ECOLI (SWALL:P19316) (226 aa) fasta scores: E(): 4.3e-38, 47.82% id in 230 aa, and to Escherichia coli respiratory nitrate reductase 1 gamma chain NarI or ChlI SWALL:NARI_ECOLI (SWALL:P11350) (225 aa) fasta scores: E(): 1.4e-37, 45.81% id in 227 aa, and to Ralstonia solanacearum probable respiratory nitrate reductase transmembrane protein rsp0977 or rs02309 SWALL:Q8XR82 (EMBL:AL646082) (227 aa) fasta scores: E(): 1.9e-69, 75.77% id in 227 aa. Similar to BPSS1156, 53.097% identity (53.333% ungapped) in 226 aa overlap; respiratory nitrate reductase gamma chain 2792625 3093307 BPSL2312 Burkholderia pseudomallei K96243 respiratory nitrate reductase gamma chain YP_108908.1 2791939 D 272560 CDS YP_108909.1 53719923 3093308 2792767..2794701 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 nitrate/nitrite sensor protein NarX or NarR SWALL:NARX_ECOLI (SWALL:P10956) (598 aa) fasta scores: E(): 3.7e-15, 28.96% id in 618 aa, and to Ralstonia solanacearum transmembrane nitrate/nitrite sensor kinase transcription regulator protein rsp0979 or rs02311 SWALL:Q8XR80 (EMBL:AL646082) (637 aa) fasta scores: E(): 3.3e-135, 58.93% id in 638 aa; nitrate/nitrite sensor protein 2794701 3093308 BPSL2313 Burkholderia pseudomallei K96243 nitrate/nitrite sensor protein YP_108909.1 2792767 D 272560 CDS YP_108910.1 53719924 3093998 2794725..2795426 1 NC_006350.1 Similar to Bacillus subtilis transcriptional regulatory protein DegU or Iep SWALL:DEGU_BACSU (SWALL:P13800) (229 aa) fasta scores: E(): 4.4e-22, 35.87% id in 223 aa, and to Ralstonia solanacearum probable nitrate/nitrite response regulator transcription regulator protein rsp0980 or rs02312 SWALL:Q8XR79 (EMBL:AL646082) (222 aa) fasta scores: E(): 8.1e-55, 76.21% id in 227 aa; response regulator protein 2795426 3093998 BPSL2314 Burkholderia pseudomallei K96243 response regulator protein YP_108910.1 2794725 D 272560 CDS YP_108911.1 53719925 3093999 2795573..2796349 1 NC_006350.1 Similar to Ralstonia solanacearum probable exodeoxyribonuclease III protein rsc1593 or rs03955 SWALL:Q8XZ13 (EMBL:AL646065) (269 aa) fasta scores: E(): 1.7e-67, 67.79% id in 267 aa, and to Xanthomonas axonopodis exodeoxyribonuclease III xac4171 SWALL:AAM39006 (EMBL:AE012067) (259 aa) fasta scores: E(): 2e-54, 55.03% id in 258 aa; hypothetical protein 2796349 3093999 BPSL2315 Burkholderia pseudomallei K96243 hypothetical protein YP_108911.1 2795573 D 272560 CDS YP_108912.1 53719926 3091636 complement(2796638..2798173) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 nitrogen regulation protein NR(I) GlnG or NtrC or GlnT SWALL:NTRC_ECOLI (SWALL:P06713) (469 aa) fasta scores: E(): 7.5e-84, 55.51% id in 508 aa, and to Ralstonia solanacearum probable nitrogen assimilation regulatory response regulator transcription regulator protein rsc1261 or rs02778 SWALL:Q8XZY4 (EMBL:AL646063) (502 aa) fasta scores: E(): 1.3e-126, 74.75% id in 511 aa; nitrogen regulation protein NR(I) 2798173 glnG 3091636 glnG Burkholderia pseudomallei K96243 nitrogen regulation protein NR(I) YP_108912.1 2796638 R 272560 CDS YP_108913.1 53719927 3091626 complement(2798211..2799305) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 nitrogen regulation protein NR(II) GlnL or NtrB or GlnR SWALL:NTRB_ECOLI (SWALL:P06712) (349 aa) fasta scores: E(): 1e-35, 42.45% id in 351 aa, and to Ralstonia solanacearum probable nitrogen regulation rsc1260 or rs02784 SWALL:Q8XZY5 (EMBL:AL646063) (361 aa) fasta scores: E(): 8.6e-86, 68.96% id in 348 aa; nitrogen regulation protein NR(II) 2799305 glnL 3091626 glnL Burkholderia pseudomallei K96243 nitrogen regulation protein NR(II) YP_108913.1 2798211 R 272560 CDS YP_108914.1 53719928 3093121 complement(2799520..2800935) 1 NC_006350.1 Similar to Escherichia coli glutamine synthetase GlnA SWALL:GLNA_ECOLI (SWALL:P06711) (468 aa) fasta scores: E(): 3.4e-133, 65.51% id in 464 aa, and to Ralstonia solanacearum probable glutamine synthetase rsc1258 or rs02774 SWALL:Q8XZY7 (EMBL:AL646063) (471 aa) fasta scores: E(): 2e-175, 85.77% id in 471 aa; glutamine synthetase 2800935 glnA 3093121 glnA Burkholderia pseudomallei K96243 glutamine synthetase YP_108914.1 2799520 R 272560 CDS YP_108915.1 53719929 3091745 2801316..2801804 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1257 or rs02773 SWALL:Q8XZY8 (EMBL:AL646063) (158 aa) fasta scores: E(): 1.2e-37, 65.78% id in 152 aa. C-terminal region is similar to Mycobacterium tuberculosis hypothetical protein rv0390 or MTCY04D9.02 SWALL:P95198 (EMBL:Z84725) (140 aa) fasta scores: E(): 2.9e-16, 45.32% id in 139 aa; hypothetical protein 2801804 3091745 BPSL2319 Burkholderia pseudomallei K96243 hypothetical protein YP_108915.1 2801316 D 272560 CDS YP_108916.1 53719930 3091746 complement(2802057..2802875) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1256 or rs02772 SWALL:Q8XZY9 (EMBL:AL646063) (272 aa) fasta scores: E(): 6.5e-74, 72.18% id in 266 aa, and to Neisseria meningitidis CinA-related protein nmb2128 SWALL:Q9JXC2 (EMBL:AE002560) (266 aa) fasta scores: E(): 1.1e-42, 49.8% id in 257 aa; hypothetical protein 2802875 3091746 BPSL2320 Burkholderia pseudomallei K96243 hypothetical protein YP_108916.1 2802057 R 272560 CDS YP_108917.1 53719931 3094311 complement(2802872..2803705) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1255 or rs02771 SWALL:Q8XZZ0 (EMBL:AL646063) (285 aa) fasta scores: E(): 2.8e-55, 53.58% id in 265 aa; hypothetical protein 2803705 3094311 BPSL2321 Burkholderia pseudomallei K96243 hypothetical protein YP_108917.1 2802872 R 272560 CDS YP_108918.1 53719932 3094312 complement(2804238..2805227) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1254 or rs02770 SWALL:Q8XZZ1 (EMBL:AL646063) (324 aa) fasta scores: E(): 7.8e-63, 49.37% id in 318 aa. Weakly similar to Agrobacterium tumefaciens hypothetical protein atu0318 or AGR_C_556 SWALL:Q8UIH7 (EMBL:AE009003) (313 aa) fasta scores: E(): 2.3e-12, 28.57% id in 308 aa; hypothetical protein 2805227 3094312 BPSL2322 Burkholderia pseudomallei K96243 hypothetical protein YP_108918.1 2804238 R 272560 CDS YP_108919.1 53719933 3092797 complement(2805244..2806236) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc1252 or rs02768 SWALL:Q8XZZ3 (EMBL:AL646063) (330 aa) fasta scores: E(): 1.1e-78, 63.57% id in 313 aa; hypothetical protein 2806236 3092797 BPSL2323 Burkholderia pseudomallei K96243 hypothetical protein YP_108919.1 2805244 R 272560 CDS YP_108920.1 53719934 3092798 complement(2806338..2810231) 1 NC_006350.1 Similar to C-terminal regions of Escherichia coli ATP-dependent helicase HrpA SWALL:HRPA_ECOLI (SWALL:P43329) (1300 aa) fasta scores: E(): 1.8e-126, 46.08% id in 1315 aa, and to Salmonella typhimurium helicase, ATP-dependent HrpA or stm1641 SWALL:Q8ZP95 (EMBL:AE008772) (1300 aa) fasta scores: E(): 7.2e-128, 46.3% id in 1313 aa. Poor translational start site, possible gene remnant; ATP-dependent helicase 2810231 3092798 BPSL2324 Burkholderia pseudomallei K96243 ATP-dependent helicase YP_108920.1 2806338 R 272560 CDS YP_108921.1 53719935 3092976 2810489..2811865 1 NC_006350.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2811865 3092976 BPSL2325 Burkholderia pseudomallei K96243 N-acetylglutamate synthase YP_108921.1 2810489 D 272560 CDS YP_108922.1 53719936 3092977 2811918..2812193 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1235 or rs02742 SWALL:Q8Y010 (EMBL:AL646063) (91 aa) fasta scores: E(): 1.1e-29, 85.22% id in 88 aa, and to Neisseria meningitidis hypothetical protein nma0419 or nmb2021 SWALL:Q9JQP5 (EMBL:AL162753) (88 aa) fasta scores: E(): 1.8e-23, 67.81% id in 87 aa; hypothetical protein 2812193 3092977 BPSL2326 Burkholderia pseudomallei K96243 hypothetical protein YP_108922.1 2811918 D 272560 CDS YP_108923.1 53719937 3092136 complement(2812366..2813709) 1 NC_006350.1 Similar to Escherichia coli shikimate transporter ShiA SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 9e-48, 35.09% id in 416 aa, and to the N-terminal region of Pseudomonas aeruginosa probable MFS transporter pa3595 SWALL:Q9HY31 (EMBL:AE004780) (469 aa) fasta scores: E(): 1.1e-60, 44.6% id in 426 aa. Similar to BPSS1252, 65.176% identity (65.485% ungapped) in 425 aa overlap, and to BPSL1075, 66.914% identity (67.079% ungapped) in 405 aa overlap, and to BPSS2123, 61.893% identity (61.893% ungapped) in 412 aa overlap; transporter protein 2813709 3092136 BPSL2327 Burkholderia pseudomallei K96243 transporter protein YP_108923.1 2812366 R 272560 CDS YP_108924.1 53719938 3092137 complement(2813906..2815288) 1 NC_006350.1 Possible pseudogene. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa3592 SWALL:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 6.1e-98, 69.63% id in 359 aa, and Rhizobium meliloti conserved membrane-anchored protein rb0848 or smb21182 SWALL:Q92V66 (EMBL:AL603645) (394 aa) fasta scores: E(): 1.7e-51, 42.06% id in 359 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible out of frame translational start after codon 56; CAIB/BAIF family protein 2815288 3092137 BPSL2328 Burkholderia pseudomallei K96243 CAIB/BAIF family protein YP_108924.1 2813906 R 272560 CDS YP_108925.1 53719939 3094830 complement(2815456..2817249) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa3593 SWALL:Q9HY33 (EMBL:AE004779) (575 aa) fasta scores: E(): 1.6e-146, 68.47% id in 571 aa, and to Escherichia coli aidb protein AidB SWALL:AIDB_ECOLI (SWALL:P33224) (541 aa) fasta scores: E(): 2.5e-31, 32.7% id in 526 aa. CDS is extended at the C-terminus in comparison to the E. coli protein and other orthologues. Possible alternative translational start sites; acyl-CoA dehydrogenase 2817249 3094830 BPSL2329 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_108925.1 2815456 R 272560 CDS YP_108926.1 53719940 3094831 2817358..2818260 1 NC_006350.1 Similar to Escherichia coli xanthosine operon regulatory protein XapR or PndR SWALL:XAPR_ECOLI (SWALL:P23841) (294 aa) fasta scores: E(): 1.4e-28, 39.08% id in 261 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3594 SWALL:Q9HY32 (EMBL:AE004780) (295 aa) fasta scores: E(): 5.7e-68, 61.97% id in 284 aa; LysR family transcriptional regulator 2818260 3094831 BPSL2330 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_108926.1 2817358 D 272560 CDS YP_108927.1 53719941 3091874 complement(2818679..2818966) 1 NC_006350.1 hypothetical protein 2818966 3091874 BPSL2331 Burkholderia pseudomallei K96243 hypothetical protein YP_108927.1 2818679 R 272560 CDS YP_108928.1 53719942 3091875 complement(2819230..2820102) 1 NC_006350.1 Poor database matches. C-terminus is weakly similar to N-terminal region is of Neisseria meningitidis hypothetical protein Nma0724 nma0724 SWALL:Q9JVR9 (EMBL:AL162754) (1161 aa) fasta scores: E(): 2.4, 23.69% id in 249 aa; hypothetical protein 2820102 3091875 BPSL2332 Burkholderia pseudomallei K96243 hypothetical protein YP_108928.1 2819230 R 272560 CDS YP_108929.1 53719943 3092281 complement(2820136..2820387) 1 NC_006350.1 Similar to Escherichia coli O157:H7 hypothetical protein ecs1067 SWALL:Q8X2Z4 (EMBL:AP002554) (95 aa) fasta scores: E(): 7.4e-08, 40.96% id in 83 aa, and to Escherichia coli O157:H7 hypothetical protein ecs2281 SWALL:Q8X366 (EMBL:AP002557) (92 aa) fasta scores: E(): 1.4e-07, 43.37% id in 83 aa; hypothetical protein 2820387 3092281 BPSL2333 Burkholderia pseudomallei K96243 hypothetical protein YP_108929.1 2820136 R 272560 CDS YP_108930.1 53719944 3092282 complement(2820398..2820856) 1 NC_006350.1 Similar to Xylella fastidiosa hypothetical protein xf2068 SWALL:Q9PBS2 (EMBL:AE004023) (151 aa) fasta scores: E(): 1.5e-18, 42.1% id in 152 aa; hypothetical protein 2820856 3092282 BPSL2334 Burkholderia pseudomallei K96243 hypothetical protein YP_108930.1 2820398 R 272560 CDS YP_108931.1 53719945 3094763 complement(2821100..2822527) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable aminotransferase pa0299 SWALL:Q9I6J2 (EMBL:AE004467) (456 aa) fasta scores: E(): 3.5e-110, 57.78% id in 443 aa, and to Pseudomonas fluorescens component of putrescine transport system BioA SWALL:Q9AH00 (EMBL:AF323694) (453 aa) fasta scores: E(): 1.3e-109, 58.07% id in 446 aa. CDS is extended at the N-terminus in comparison to orthologues. Similar to BPSS0468, 96.218% identity (97.240% ungapped) in 476 aa overlap; aminotransferase 2822527 3094763 BPSL2335 Burkholderia pseudomallei K96243 aminotransferase YP_108931.1 2821100 R 272560 CDS YP_108932.1 53719946 3094764 complement(2822562..2823896) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable glutamine synthetase pa0298 SWALL:Q9I6J3 (EMBL:AE004467) (452 aa) fasta scores: E(): 1.2e-104, 55.35% id in 448 aa, and to Caulobacter crescentus glutamine synthetase cc3130 SWALL:Q9A3S2 (EMBL:AE005976) (465 aa) fasta scores: E(): 2.5e-109, 61.53% id in 442 aa. BPSS0469, 87.838% identity (87.838% ungapped) in 444 aa overlap; glutamine synthetase 2823896 3094764 BPSL2336 Burkholderia pseudomallei K96243 glutamine synthetase YP_108932.1 2822562 R 272560 CDS YP_108933.1 53719947 3092884 complement(2823929..2824720) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable glutamine amidotransferase pa0297 SWALL:Q9I6J4 (EMBL:AE004467) (250 aa) fasta scores: E(): 7.4e-50, 58.26% id in 242 aa, and to Xanthomonas campestris glutamine amidotransferase xcc2347 SWALL:AAM41625 (EMBL:AE012342) (251 aa) fasta scores: E(): 5.8e-43, 56.01% id in 241 aa. Similar to BPSS0470, 66.537% identity (67.857% ungapped) in 257 aa overlap; glutamine amidotransferase class-I 2824720 3092884 BPSL2337 Burkholderia pseudomallei K96243 glutamine amidotransferase class-I YP_108933.1 2823929 R 272560 CDS YP_108934.1 53719948 3092885 complement(2825728..2826531) 1 NC_006350.1 Similar to Pseudomonas aeruginosa N-formylglutamate amidohydrolase HutG or pa5091 SWALL:Q9HU92 (EMBL:AE004922) (266 aa) fasta scores: E(): 1.1e-50, 54.37% id in 263 aa, and to Pseudomonas putida N-formylglutamate amidohydrolase HutG SWALL:O31201 (EMBL:AF032970) (267 aa) fasta scores: E(): 2.3e-50, 51.56% id in 256 aa; HutG protein 2826531 3092885 BPSL2338 Burkholderia pseudomallei K96243 HutG protein YP_108934.1 2825728 R 272560 CDS YP_108935.1 53719949 3092652 complement(2826775..2828157) 1 NC_006350.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 2828157 3092652 BPSL2339 Burkholderia pseudomallei K96243 N-formimino-L-glutamate deiminase YP_108935.1 2826775 R 272560 CDS YP_108936.1 53719950 3092653 complement(2828171..2829394) 1 NC_006350.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 2829394 3092653 BPSL2340 Burkholderia pseudomallei K96243 imidazolonepropionase YP_108936.1 2828171 R 272560 CDS YP_108937.1 53719951 3094099 complement(2829391..2830050) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2522 or rs01060 SWALL:Q8XWF2 (EMBL:AL646070) (200 aa) fasta scores: E(): 1.6e-15, 42.48% id in 193 aa, and to Pseudomonas putida hypothetical protein in hutC 3'region SWALL:YHUT_PSEPU (SWALL:P24696) (190 aa) fasta scores: E(): 2.8e-15, 40.55% id in 180 aa; hypothetical protein 2830050 3094099 BPSL2341 Burkholderia pseudomallei K96243 hypothetical protein YP_108937.1 2829391 R 272560 CDS YP_108938.1 53719952 3091781 complement(2830050..2831738) 1 NC_006350.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 2831738 hutU 3091781 hutU Burkholderia pseudomallei K96243 urocanate hydratase YP_108938.1 2830050 R 272560 CDS YP_108939.1 53719953 3094100 complement(2831781..2832476) 1 NC_006350.1 Similar to Klebsiella aerogenes histidine utilization repressor HutC SWALL:HUTC_KLEAE (SWALL:P12380) (241 aa) fasta scores: E(): 2e-38, 47.36% id in 228 aa, and to Ralstonia solanacearum probable histidine utilization repressor transcription regulator protein rsc2648 or rs04568 SWALL:Q8XW27 (EMBL:AL646071) (237 aa) fasta scores: E(): 2e-53, 59.38% id in 229 aa; histidine utilization repressor 2832476 3094100 BPSL2343 Burkholderia pseudomallei K96243 histidine utilization repressor YP_108939.1 2831781 R 272560 CDS YP_108940.1 53719954 3091780 complement(2832481..2834004) 1 NC_006350.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 2834004 hutH 3091780 hutH Burkholderia pseudomallei K96243 histidine ammonia-lyase YP_108940.1 2832481 R 272560 CDS YP_108941.1 53719955 3092556 complement(2834673..2835464) 1 NC_006350.1 Weakly similar to Anabaena sp. 4'-phosphopantetheinyl transferase HetI or all5359 SWALL:HETI_ANASP (SWALL:P37695) (237 aa) fasta scores: E(): 9e-12, 31.57% id in 209 aa, and to the N-terminal region of Streptomyces venezuelae phosphopantetheinyl transferase JadM SWALL:Q9L7M4 (EMBL:AF222693) (262 aa) fasta scores: E(): 1.1e-10, 34.89% id in 235 aa; hypothetical protein 2835464 3092556 BPSL2345 Burkholderia pseudomallei K96243 hypothetical protein YP_108941.1 2834673 R 272560 CDS YP_108942.1 53719956 3092557 complement(2835569..2836579) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0795 or rs01912 SWALL:Q8XRN6 (EMBL:AL646080) (290 aa) fasta scores: E(): 6.6e-18, 33.79% id in 290 aa, and to Pseudomonas aeruginosa hypothetical protein pa1239 SWALL:Q9I499 (EMBL:AE004553) (294 aa) fasta scores: E(): 2.9e-17, 31.68% id in 303 aa. CDS is extended at the C-terminus in comparison to orthologues; hypothetical protein 2836579 3092557 BPSL2346 Burkholderia pseudomallei K96243 hypothetical protein YP_108942.1 2835569 R 272560 CDS YP_108943.1 53719957 3091912 complement(2837796..2838521) 1 NC_006350.1 Similar to Escherichia coli regulatory protein SdiA SWALL:SDIA_ECOLI (SWALL:P07026) (240 aa) fasta scores: E(): 7.9e-24, 34.87% id in 238 aa, and to Ralstonia solanacearum probable transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein rsp0778 or rs01929 SWALL:Q8XRQ3 (EMBL:AL646080) (248 aa) fasta scores: E(): 8.1e-46, 51.03% id in 241 aa; LuxR family transcriptional regulator 2838521 3091912 BPSL2347 Burkholderia pseudomallei K96243 LuxR family transcriptional regulator YP_108943.1 2837796 R 272560 CDS YP_108944.1 53719958 3093055 complement(2840120..2841580) 1 NC_006350.1 Similar to the N-terminal region of Arabidopsis thaliana cryptochrome 1 apoprotein CRY1 or HY4 SWALL:CRY1_ARATH (SWALL:Q43125) (681 aa) fasta scores: E(): 9.1e-64, 39.91% id in 486 aa, and to the full length Caulobacter crescentus deoxyribodipyrimidine photolyase cc1428 SWALL:Q9A8C6 (EMBL:AE005817) (483 aa) fasta scores: E(): 2.6e-93, 50.72% id in 481 aa; DNA photolyase 2841580 3093055 BPSL2349 Burkholderia pseudomallei K96243 DNA photolyase YP_108944.1 2840120 R 272560 CDS YP_108945.1 53719959 3092483 2842000..2843166 1 NC_006350.1 Similar to Pseudomonas oleovorans plasmid-encoded alkane-1 monooxygenase AlkB SWALL:ALKB_PSEOL (SWALL:P12691) (401 aa) fasta scores: E(): 4.1e-75, 47.75% id in 379 aa, and to Burkholderia cepacia alkane hydroxylase AlkB SWALL:Q9AEN3 (EMBL:AJ293306) (386 aa) fasta scores: E(): 1.2e-132, 81.36% id in 381 aa; alkane monooxygenase 2843166 3092483 BPSL2350 Burkholderia pseudomallei K96243 alkane monooxygenase YP_108945.1 2842000 D 272560 CDS YP_108946.1 53719960 3092484 2843904..2846192 1 NC_006350.1 Similar to Ralstonia solanacearum probable nitric oxide reductase rsp1505 or rs03036 SWALL:Q8XPY1 (EMBL:AL646085) (756 aa) fasta scores: E(): 2.4e-213, 70.34% id in 762 aa. C-terminal region is similar to Pseudomonas aeruginosa nitric-oxide reductase subunit b norb or pa0524 SWALL:NORB_PSEAE (SWALL:Q59647) (466 aa) fasta scores: E(): 5.7e-22, 28.75% id in 480 aa; hypothetical protein 2846192 3092484 BPSL2351 Burkholderia pseudomallei K96243 hypothetical protein YP_108946.1 2843904 D 272560 CDS YP_108947.1 53719961 3093864 2846670..2847803 1 NC_006350.1 N-terminus is similar to the C-terminal region of Xanthomonas campestris hypothetical protein xcc2626 SWALL:AAM41898 (EMBL:AE012374) (295 aa) fasta scores: E(): 0.017, 32.3% id in 226 aa. C-terminus is weakly similar to the C-terminal region of Pyrobaculum aerophilum hypothetical protein pae3602 SWALL:Q8ZSS9 (EMBL:AE009940) (375 aa) fasta scores: E(): 0.0079, 28.39% id in 331 aa; hypothetical protein 2847803 3093864 BPSL2354 Burkholderia pseudomallei K96243 hypothetical protein YP_108947.1 2846670 D 272560 CDS YP_108948.1 53719962 3091952 2847949..2849172 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc3399 or rs01707 SWALL:Q8XTZ6 (EMBL:AL646075) (403 aa) fasta scores: E(): 5.1e-53, 43.76% id in 393 aa, and to Rhizobium meliloti hypothetical protein ra0682 or sma1252 SWALL:Q92Z28 (EMBL:AE007256) (403 aa) fasta scores: E(): 5.1e-34, 35.86% id in 382 aa. Similar to BPSL2368, 52.030% identity (52.564% ungapped) in 394 aa overlap; hypothetical protein 2849172 3091952 BPSL2355 Burkholderia pseudomallei K96243 hypothetical protein YP_108948.1 2847949 D 272560 CDS YP_108949.1 53719963 3091953 2849770..2851533 1 NC_006350.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 2851533 3091953 BPSL2356 Burkholderia pseudomallei K96243 anaerobic ribonucleoside triphosphate reductase YP_108949.1 2849770 D 272560 CDS YP_108950.1 53719964 3092096 2851536..2851748 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0964 or rs02295 SWALL:Q8XR95 (EMBL:AL646082) (58 aa) fasta scores: E(): 4.1e-12, 70.45% id in 44 aa. Similar the C-terminal region of Thermoanaerobacter tengcongensis oxygen-sensitive ribonucleoside-triphosphate reductase NrdD or tte1850 SWALL:Q8R8Y4 (EMBL:AE013136) (692 aa) fasta scores: E(): 0.0037, 51.61% id in 31 aa. Possible gene remnant; hypothetical protein 2851748 3092096 BPSL2357 Burkholderia pseudomallei K96243 hypothetical protein YP_108950.1 2851536 D 272560 CDS YP_108951.1 53719965 3092097 2851767..2852486 1 NC_006350.1 Weakly similar to Clostridium pasteurianum pyruvate formate-lyase activating enzyme Act SWALL:PFLA_CLOPA (SWALL:Q46267) (238 aa) fasta scores: E(): 1e-05, 27.75% id in 209 aa. Similar to Pseudomonas aeruginosa probable radical-activating enzyme pa1919 SWALL:Q9I2I5 (EMBL:AE004618) (232 aa) fasta scores: E(): 3.2e-37, 50.21% id in 231 aa; pyruvate radical-activating enzyme 2852486 3092097 BPSL2358 Burkholderia pseudomallei K96243 pyruvate radical-activating enzyme YP_108951.1 2851767 D 272560 CDS YP_108952.1 53719966 3091797 complement(2852734..2853180) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3880 SWALL:Q9HXD2 (EMBL:AE004805) (131 aa) fasta scores: E(): 6.5e-23, 64.76% id in 105 aa, and to Ralstonia solanacearum lipoprotein rsp0967 or rs02298 SWALL:Q8XR92 (EMBL:AL646082) (139 aa) fasta scores: E(): 2.3e-19, 52.99% id in 117 aa. Lower levels of similarity in the C-terminal regions; hypothetical protein 2853180 3091797 BPSL2359 Burkholderia pseudomallei K96243 hypothetical protein YP_108952.1 2852734 R 272560 CDS YP_108953.1 53719967 3091798 complement(2853220..2853699) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0968 or rs02299 SWALL:Q8XR91 (EMBL:AL646082) (143 aa) fasta scores: E(): 1.5e-11, 41.42% id in 140 aa. C-terminus is similar to the C-terminal region of Yersinia pestis lipid carrier protein ypo3477 SWALL:Q8ZBD9 (EMBL:AJ414157) (173 aa) fasta scores: E(): 1.3e-11, 47.17% id in 106 aa; hypothetical protein 2853699 3091798 BPSL2360 Burkholderia pseudomallei K96243 hypothetical protein YP_108953.1 2853220 R 272560 CDS YP_108954.1 53719968 3092167 complement(2853755..2854642) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0969 or rs02300 SWALL:Q8XR90 (EMBL:AL646082) (294 aa) fasta scores: E(): 1.6e-53, 49.82% id in 291 aa, and to Yersinia pestis hypothetical protein ypo3480 SWALL:Q8ZBD6 (EMBL:AJ414157) (292 aa) fasta scores: E(): 2e-43, 41.52% id in 301 aa; hypothetical protein 2854642 3092167 BPSL2361 Burkholderia pseudomallei K96243 hypothetical protein YP_108954.1 2853755 R 272560 CDS YP_108955.1 53719969 3092168 complement(2854683..2855717) 1 NC_006350.1 Similar to Escherichia coli protease YhbU or b3158 SWALL:YHBU_ECOLI (SWALL:P45527) (331 aa) fasta scores: E(): 8.9e-86, 62.84% id in 331 aa, and to Pseudomonas aeruginosa probable protease pa3913 SWALL:Q9HXA0 (EMBL:AE004808) (331 aa) fasta scores: E(): 1.1e-84, 62.53% id in 331 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site; hypothetical protein 2855717 3092168 BPSL2362 Burkholderia pseudomallei K96243 hypothetical protein YP_108955.1 2854683 R 272560 CDS YP_108956.1 53719970 3092162 complement(2855806..2857023) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0114 or rs00984 SWALL:Q8Y367 (EMBL:AL646057) (402 aa) fasta scores: E(): 6.8e-91, 64.81% id in 378 aa, and to Neisseria meningitidis hypothetical protein nma1666 SWALL:Q9JTR4 (EMBL:AL162756) (391 aa) fasta scores: E(): 5.7e-81, 57.88% id in 387 aa. CDS is extended at the N-terminus in comparison to orthologues. Similar to BPSL1551, 62.141% identity (62.632% ungapped) in 383 aa overlap; 2-nitropropane dioxygenase 2857023 3092162 BPSL2363 Burkholderia pseudomallei K96243 2-nitropropane dioxygenase YP_108956.1 2855806 R 272560 CDS YP_108957.1 53719971 3092163 2857243..2858559 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0971 or rs02303 SWALL:Q8XR88 (EMBL:AL646082) (406 aa) fasta scores: E(): 3.5e-25, 32.36% id in 411 aa, and to Rhizobium meliloti hypothetical protein ra0687 or sma1259 SWALL:Q92Z23 (EMBL:AE007256) (452 aa) fasta scores: E(): 1.2e-18, 30.42% id in 447 aa; hypothetical protein 2858559 3092163 BPSL2364 Burkholderia pseudomallei K96243 hypothetical protein YP_108957.1 2857243 D 272560 CDS YP_108958.1 53719972 3092078 complement(2858536..2859228) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsp0966 or rs02297 SWALL:Q8XR93 (EMBL:AL646082) (225 aa) fasta scores: E(): 8.1e-27, 38.59% id in 228 aa. Weakly similar to Synechococcus sp. global nitrogen regulator NtcA SWALL:NTCA_SYNP7 (SWALL:P29283) (222 aa) fasta scores: E(): 5.8e-08, 28.91% id in 211 aa; regulatory protein 2859228 3092078 BPSL2365 Burkholderia pseudomallei K96243 regulatory protein YP_108958.1 2858536 R 272560 CDS YP_108959.1 53719973 3092079 complement(2859237..2860682) 1 NC_006350.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2860682 3092079 BPSL2366 Burkholderia pseudomallei K96243 coproporphyrinogen III oxidase YP_108959.1 2859237 R 272560 CDS YP_108960.1 53719974 3091619 complement(2860837..2862759) 1 NC_006350.1 C-terminal region is similar to the N-terminal region of Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or CheM SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 1.9e-45, 44.1% id in 390 aa, and to an internal region of Ralstonia solanacearum probable methyl-accepting chemotaxis I MCP-I serine chemoreceptor transmembrane protein rsp0507 or rs00386 SWALL:Q8XSG9 (EMBL:AL646079) (600 aa) fasta scores: E(): 5.3e-47, 39.06% id in 535 aa; methyl-accepting chemotaxis protein 2862759 3091619 BPSL2367 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_108960.1 2860837 R 272560 CDS YP_108961.1 53719975 3091620 2863293..2864489 1 NC_006350.1 Similar to Rhodobacter sphaeroides membrane-bound haem-copper protein NnrS SWALL:Q936J2 (EMBL:U62403) (397 aa) fasta scores: E(): 5.1e-40, 38.46% id in 403 aa, and to Ralstonia solanacearum probable transmembrane protein rsc3399 or rs01707 SWALL:Q8XTZ6 (EMBL:AL646075) (403 aa) fasta scores: E(): 5.8e-69, 51.51% id in 396 aa. Similar to BPSL2355, 52.030% identity (52.564% ungapped) in 394 aa overlap; hypothetical protein 2864489 3091620 BPSL2368 Burkholderia pseudomallei K96243 hypothetical protein YP_108961.1 2863293 D 272560 CDS YP_108962.1 53719976 3091762 2864978..2866432 1 NC_006350.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2866432 3091762 BPSL2369 Burkholderia pseudomallei K96243 cysteine desulfurase activator complex subunit SufB YP_108962.1 2864978 D 272560 CDS YP_108963.1 53719977 3091763 2866441..2867232 1 NC_006350.1 Similar to Escherichia coli probable ATP-dependent transporter SufC SWALL:SUFC_ECOLI (SWALL:P77499) (248 aa) fasta scores: E(): 1.6e-31, 44.81% id in 241 aa, and to Xanthomonas axonopodis ABC transporter ATP-binding protein xac2936 SWALL:AAM37781 (EMBL:AE011935) (254 aa) fasta scores: E(): 3e-32, 44.81% id in 241 aa; ATP-dependent transporter protein 2867232 3091763 BPSL2370 Burkholderia pseudomallei K96243 ATP-dependent transporter protein YP_108963.1 2866441 D 272560 CDS YP_108964.1 53719978 3093069 2867237..2868472 1 NC_006350.1 Weakly similar to Escherichia coli SufD b1681 SWALL:SUFD_ECOLI (SWALL:P77689) (423 aa) fasta scores: E(): 9.9e-06, 21.84% id in 380 aa, and to Xanthomonas axonopodis ABC transporter permease xac2937 SWALL:AAM37782 (EMBL:AE011935) (420 aa) fasta scores: E(): 9.6e-13, 27.13% id in 387 aa; hypothetical protein 2868472 3093069 BPSL2371 Burkholderia pseudomallei K96243 hypothetical protein YP_108964.1 2867237 D 272560 CDS YP_108965.1 53719979 3093070 2868474..2869706 1 NC_006350.1 Similar to Escherichia coli selenocysteine lyase CsdB or SufS or b1680 SWALL:CSDB_ECOLI (SWALL:P77444) (406 aa) fasta scores: E(): 4.1e-54, 40% id in 410 aa, and to Vibrio cholerae probable cysteine desulfurase vc2309 SWALL:CSD_VIBCH (SWALL:Q9KPQ7) (404 aa) fasta scores: E(): 1.6e-61, 43.27% id in 409 aa; selenocysteine lyase 2869706 3093070 BPSL2372 Burkholderia pseudomallei K96243 selenocysteine lyase YP_108965.1 2868474 D 272560 CDS YP_108966.1 53719980 3092357 2869703..2870194 1 NC_006350.1 Similar to Bacillus halodurans nitrogen fixation protein bh3468 SWALL:Q9K7A1 (EMBL:AP001518) (146 aa) fasta scores: E(): 5.2e-18, 40% id in 135 aa, and to Bacillus subtilis NifU-like protein NifU SWALL:NIFU_BACSU (SWALL:O32163) (147 aa) fasta scores: E(): 4.6e-17, 37.98% id in 129 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 2870194 3092357 BPSL2373 Burkholderia pseudomallei K96243 hypothetical protein YP_108966.1 2869703 D 272560 CDS YP_108967.1 53719981 3092358 2870191..2870739 1 NC_006350.1 Similar to Xanthomonas axonopodis hypothetical protein xac0926 SWALL:AAM35814 (EMBL:AE011724) (184 aa) fasta scores: E(): 8.7e-26, 46.4% id in 181 aa, and to Xanthomonas campestris hypothetical protein xcc0849 SWALL:AAM40164 (EMBL:AE012184) (184 aa) fasta scores: E(): 2.3e-25, 45.85% id in 181 aa; hypothetical protein 2870739 3092358 BPSL2374 Burkholderia pseudomallei K96243 hypothetical protein YP_108967.1 2870191 D 272560 CDS YP_108968.1 53719982 3094281 complement(2871037..2871336) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp1504 or rs03037 SWALL:Q8XPY2 (EMBL:AL646085) (100 aa) fasta scores: E(): 3.2e-10, 40% id in 100 aa, and to Clostridium acetobutylicum hypothetical protein cac0072 SWALL:Q97MW8 (EMBL:AE007520) (77 aa) fasta scores: E(): 3.2e-12, 52.56% id in 78 aa. CDS is extended at the C-terminus in comparison to C. acetobutylicum protein; hypothetical protein 2871336 3094281 BPSL2375 Burkholderia pseudomallei K96243 hypothetical protein YP_108968.1 2871037 R 272560 CDS YP_108969.1 53719983 3094282 2871527..2872015 1 NC_006350.1 Possible gene remnant. N-terminus is similar to the N-terminal regions of Bacillus subtilis hypothetical protein YhdE SWALL:YHDE_BACSU (SWALL:O07573) (146 aa) fasta scores: E(): 1.9e-22, 50% id in 132 aa, and Neisseria meningitidis hypothetical protein nma2048 SWALL:Q9JT09 (EMBL:AL162758) (147 aa) fasta scores: E(): 6.6e-21, 47.76% id in 134 aa; DNA-binding protein 2872015 3094282 BPSL2376 Burkholderia pseudomallei K96243 DNA-binding protein YP_108969.1 2871527 D 272560 CDS YP_108970.1 53719984 3092370 complement(2872233..2872658) 1 NC_006350.1 Similar to Ralstonia solanacearum hemerythrin-like protein rsc0777 or rs05077 SWALL:HEMT_RALSO (SWALL:Q8Y1B3) (137 aa) fasta scores: E(): 7e-15, 43.1% id in 116 aa, and to Aquifex aeolicus hemerythrin-like protein AQ_1719 SWALL:HEMT_AQUAE (SWALL:O67614) (131 aa) fasta scores: E(): 0.0095, 28.33% id in 120 aa; cation-binding hemerythrin HHE family protein 2872658 3092370 BPSL2377 Burkholderia pseudomallei K96243 cation-binding hemerythrin HHE family protein YP_108970.1 2872233 R 272560 CDS YP_108971.1 53719985 3092531 2873037..2873927 1 NC_006350.1 Similar to Escherichia coli ubiquinol oxidase polypeptide II precursor CyoA SWALL:CYOA_ECOLI (SWALL:P18400) (315 aa) fasta scores: E(): 2.9e-63, 55.51% id in 290 aa, and to Acetobacter pasteurianus ubiquinol oxidase subunit II SWALL:BAB97173 (EMBL:AB086015) (308 aa) fasta scores: E(): 1.2e-72, 66.07% id in 280 aa. Similar to BPSS1897, 93.220% identity (93.537% ungapped) in 295 aa overlap; ubiquinol oxidase polypeptide II 2873927 cyoA 3092531 cyoA Burkholderia pseudomallei K96243 ubiquinol oxidase polypeptide II YP_108971.1 2873037 D 272560 CDS YP_108972.1 53719986 3093212 2873931..2875937 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 ubiquinol oxidase polypeptide I CyoB SWALL:CYOB_ECOLI (SWALL:P18401) (663 aa) fasta scores: E(): 6.3e-183, 66.2% id in 651 aa, and to Acetobacter pasteurianus ubiquinol oxidase subunit I SWALL:BAB97174 (EMBL:AB086015) (663 aa) fasta scores: E(): 4.4e-195, 69.38% id in 650 aa. Similar to BPSS1896, 84.179% identity (84.431% ungapped) in 670 aa overlap; ubiquinol oxidase polypeptide I 2875937 cyoB 3093212 cyoB Burkholderia pseudomallei K96243 ubiquinol oxidase polypeptide I YP_108972.1 2873931 D 272560 CDS YP_108973.1 53719987 3094854 2875937..2876542 1 NC_006350.1 Similar to Escherichia coli cytochrome o ubiquinol oxidase subunit III CyoC SWALL:CYOC_ECOLI (SWALL:P18402) (204 aa) fasta scores: E(): 2.7e-45, 56.65% id in 203 aa, and to Acetobacter pasteurianus ubiquinol oxidase subunit III SWALL:BAB97175 (EMBL:AB086015) (201 aa) fasta scores: E(): 1.3e-50, 62.56% id in 203 aa. Similar to BPSS1895, 87.500% identity (87.958% ungapped) in 192 aa overlap; cytochrome o ubiquinol oxidase subunit III 2876542 cyoC 3094854 cyoC Burkholderia pseudomallei K96243 cytochrome o ubiquinol oxidase subunit III YP_108973.1 2875937 D 272560 CDS YP_108974.1 53719988 3094855 2876543..2876875 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 cytochrome o ubiquinol oxidase CyoD SWALL:CYOD_ECOLI (SWALL:P18403) (109 aa) fasta scores: E(): 4.5e-16, 46.29% id in 108 aa, and to Yersinia pestis cytochrome o ubiquinol oxidase subunit ypo3167 SWALL:Q8ZC55 (EMBL:AJ414155) (110 aa) fasta scores: E(): 2.3e-18, 50% id in 108 aa. Similar to BPSS1894, 80.000% identity (80.000% ungapped) in 110 aa overlap; cytochrome o ubiquinol oxidase 2876875 cyoD 3094855 cyoD Burkholderia pseudomallei K96243 cytochrome o ubiquinol oxidase YP_108974.1 2876543 D 272560 CDS YP_108975.1 53719989 3092371 2877018..2878250 1 NC_006350.1 Internal region is weakly similar to Synechococcus sp. omega-3 desaturase DesB SWALL:O07872 (EMBL:U36389) (350 aa) fasta scores: E(): 4.4e-18, 26.3% id in 346 aa; fatty acid desaturase 2878250 3092371 BPSL2382 Burkholderia pseudomallei K96243 fatty acid desaturase YP_108975.1 2877018 D 272560 CDS YP_108976.1 53719990 3091630 complement(2878543..2879337) 1 NC_006350.1 Similar to Salmonella typhimurium histidine-binding periplasmic protein precursor HisJ SWALL:HISJ_SALTY (SWALL:P02910) (260 aa) fasta scores: E(): 1.1e-45, 47.26% id in 256 aa, and to Yersinia pestis histidine-binding periplasmic protein ypo2774 SWALL:Q8ZD19 (EMBL:AJ414153) (262 aa) fasta scores: E(): 1.1e-47, 50.95% id in 261 aa. Similar to BPSL3383, 55.636% identity (56.250% ungapped) in 275 aa overlap, and to BPSS0269, 51.953% identity (51.953% ungapped) in 256 aa overlap, and to BPSL1033, 51.575% identity (51.575% ungapped) in 254 aa overlap; histidine-binding periplasmic protein 2879337 3091630 BPSL2383 Burkholderia pseudomallei K96243 histidine-binding periplasmic protein YP_108976.1 2878543 R 272560 CDS YP_108977.1 53719991 3092489 complement(2880134..2881183) 1 NC_006350.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 2881183 astE 3092489 astE Burkholderia pseudomallei K96243 succinylglutamate desuccinylase YP_108977.1 2880134 R 272560 CDS YP_108978.1 53719992 3093485 complement(2881167..2882507) 1 NC_006350.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 2882507 astB 3093485 astB Burkholderia pseudomallei K96243 succinylarginine dihydrolase YP_108978.1 2881167 R 272560 CDS YP_108979.1 53719993 3093486 complement(2882521..2883984) 1 NC_006350.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 2883984 astD 3093486 astD Burkholderia pseudomallei K96243 succinylglutamic semialdehyde dehydrogenase YP_108979.1 2882521 R 272560 CDS YP_108980.1 53719994 3093017 complement(2883989..2885020) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 arginine N-succinyltransferase AstA SWALL:ASTA_ECOLI (SWALL:P76218) (344 aa) fasta scores: E(): 7.4e-60, 46.74% id in 338 aa, and to Pseudomonas aeruginosa arginine N-succinyltransferase, beta chain AruA or pa0897 SWALL:ASTG_PSEAE (SWALL:P80358) (340 aa) fasta scores: E(): 3.9e-53, 42.22% id in 341 aa, and to Pseudomonas aeruginosa arginine N-succinyltransferase, alpha chain AstA or AruF or pa0896 SWALL:ASTA_PSEAE (SWALL:P80357) (338 aa) fasta scores: E(): 2e-39, 37.13% id in 342 aa; arginine N-succinyltransferase subunit beta 2885020 3093017 BPSL2388 Burkholderia pseudomallei K96243 arginine N-succinyltransferase subunit beta YP_108980.1 2883989 R 272560 CDS YP_108981.1 53719995 3093018 complement(2885017..2886075) 1 NC_006350.1 Similar to Pseudomonas aeruginosa arginine N-succinyltransferase, alpha chain AstA or AruF or pa0896 SWALL:ASTA_PSEAE (SWALL:P80357) (338 aa) fasta scores: E(): 1e-52, 44.34% id in 336 aa, and to Escherichia coli, and Escherichia coli O157:H7 arginine N-succinyltransferase AstA SWALL:ASTA_ECOLI (SWALL:P76218) (344 aa) fasta scores: E(): 1.1e-36, 35.5% id in 338 aa, and to Pseudomonas aeruginosa arginine N-succinyltransferase, beta chain AruG or pa0897 SWALL:ASTG_PSEAE (SWALL:P80358) (340 aa) fasta scores: E(): 2e-36, 36.41% id in 346 aa; arginine N-succinyltransferase subunit alpha 2886075 3093018 BPSL2389 Burkholderia pseudomallei K96243 arginine N-succinyltransferase subunit alpha YP_108981.1 2885017 R 272560 CDS YP_108982.1 53719996 3093428 complement(2886121..2887353) 1 NC_006350.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase 2887353 argD 3093428 argD Burkholderia pseudomallei K96243 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase YP_108982.1 2886121 R 272560 CDS YP_108983.1 53719997 3094403 complement(2888093..2889139) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa5380 SWALL:Q9HTI4 (EMBL:AE004950) (367 aa) fasta scores: E(): 2.6e-41, 40.06% id in 322 aa, and to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 2.9e-35, 35.67% id in 328 aa; AraC family transcriptional regulator 2889139 3094403 BPSL2391 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_108983.1 2888093 R 272560 CDS YP_108984.1 53719998 3094528 complement(2889158..2889952) 1 NC_006350.1 Similar to Salmonella typhimurium histidine transport ATP-binding protein HisP SWALL:HISP_SALTY (SWALL:P02915) (258 aa) fasta scores: E(): 1.5e-61, 70.35% id in 253 aa, and to Pseudomonas aeruginosa arginine/ornithine transport ATP-binding protein AotP or pa0892 SWALL:AOTP_PSEAE (SWALL:O30506) (254 aa) fasta scores: E(): 1.3e-61, 71.93% id in 253 aa. Similar to BPSL1030, 87.747% identity (87.747% ungapped) in 253 aa overlap, and to BPSS0983, 78.656% identity (78.656% ungapped) in 253 aa overlap, and to BPSS2335, 51.417% identity (54.043% ungapped) in 247 aa overlap, and to the C-terminal region of BPSS1671, 52.362% identity (53.629% ungapped) in 254 aa overlap; histidine transport ATP-binding protein 2889952 hisP 3094528 hisP Burkholderia pseudomallei K96243 histidine transport ATP-binding protein YP_108984.1 2889158 R 272560 CDS YP_108985.1 53719999 3094485 complement(2889974..2890687) 1 NC_006350.1 Similar to Salmonella typhimurium, and Salmonella typhi histidine transport system permease HisM SWALL:HISM_SALTY (SWALL:P02912) (235 aa) fasta scores: E(): 1.2e-59, 61.96% id in 234 aa, and to Yersinia pestis histidine transport system permease ypo2776 SWALL:Q8ZD17 (EMBL:AJ414153) (238 aa) fasta scores: E(): 1.9e-60, 63.36% id in 232 aa. Similar to BPSL1031, 74.138% identity (74.138% ungapped) in 232 aa overlap, and to BPSS0982, 67.511% identity (67.511% ungapped) in 237 aa overlap; histidine transport system permease 2890687 hisM 3094485 hisM Burkholderia pseudomallei K96243 histidine transport system permease YP_108985.1 2889974 R 272560 CDS YP_108986.1 53720000 3094254 complement(2890684..2891373) 1 NC_006350.1 Similar to Salmonella typhimurium, and Salmonella typhi histidine transport system permease HisQ SWALL:HISQ_SALTY (SWALL:P02913) (228 aa) fasta scores: E(): 7.6e-53, 65.19% id in 227 aa, and to Pseudomonas aeruginosa histidine transport system permease pa2924 SWALL:Q9HZS3 (EMBL:AE004718) (229 aa) fasta scores: E(): 8.1e-55, 68% id in 225 aa. Similar to BPSL1032, 79.039% identity (79.039% ungapped) in 229 aa overlap, and to BPSS0981, 77.293% identity (77.293% ungapped) in 229 aa overlap; histidine transport system permease 2891373 hisQ 3094254 hisQ Burkholderia pseudomallei K96243 histidine transport system permease YP_108986.1 2890684 R 272560 CDS YP_108987.1 53720001 3094404 complement(2891689..2892249) 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein rsc2382 or rs01163 SWALL:Q8XWT8 (EMBL:AL646069) (180 aa) fasta scores: E(): 3.6e-28, 47.97% id in 173 aa. N-terminus is similar to the N-terminal region of Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor acrA or MtcA or Lir SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 0.12, 30.15% id in 126 aa; lipoprotein 2892249 3094404 BPSL2395 Burkholderia pseudomallei K96243 lipoprotein YP_108987.1 2891689 R 272560 CDS YP_108988.1 53720002 3093507 complement(2892943..2893989) 1 NC_006350.1 Weakly similar to Synechococcus sp. hypothetical protein see0027 SWALL:AAM82702 (EMBL:AY120853) (316 aa) fasta scores: E(): 0.0072, 27.15% id in 313 aa, and to Chlorobium tepidum hypothetical protein ct1155 SWALL:AAM72388 (EMBL:AE012876) (354 aa) fasta scores: E(): 0.018, 27.35% id in 329 aa; hypothetical protein 2893989 3093507 BPSL2396 Burkholderia pseudomallei K96243 hypothetical protein YP_108988.1 2892943 R 272560 CDS YP_108989.1 53720003 3093508 complement(2893986..2894873) 1 NC_006350.1 Weakly similar to Mus musculus 1810015a11rik protein SWALL:Q9D8Z7 (EMBL:AK007503) (310 aa) fasta scores: E(): 6.5e-09, 30.69% id in 303 aa, and to Listeria innocua hypothetical protein lin2456 SWALL:Q928S6 (EMBL:AL596172) (248 aa) fasta scores: E(): 2.1e-07, 26.29% id in 270 aa; hypothetical protein 2894873 3093508 BPSL2397 Burkholderia pseudomallei K96243 hypothetical protein YP_108989.1 2893986 R 272560 CDS YP_108990.1 53720004 3092192 complement(2894877..2896298) 1 NC_006350.1 Similar to Methanopyrus kandleri predicted Fe-S oxidoreductase MK0992 SWALL:Q8TWP0 (EMBL:AE010388) (483 aa) fasta scores: E(): 1.8e-33, 31.3% id in 428 aa. Weakly similar to the N-terminal region of Rhodobacter capsulatus magnesium-protoporphyrin IX monomethyl ester oxidative cyclase subunit BchE SWALL:BCHE_RHOCA (SWALL:P26168) (575 aa) fasta scores: E(): 2.1e-10, 25.69% id in 471 aa; hypothetical protein 2896298 3092192 BPSL2398 Burkholderia pseudomallei K96243 hypothetical protein YP_108990.1 2894877 R 272560 CDS YP_108991.1 53720005 3092193 complement(2896410..2897591) 1 NC_006350.1 Similar to Homo sapiens ceramide glucosyltransferase UGCG SWALL:CEGT_HUMAN (SWALL:Q16739) (394 aa) fasta scores: E(): 1.1e-15, 26.7% id in 397 aa, and to Synechocystis sp. ceramide glucosyltransferase slr0813 SWALL:P74046 (EMBL:D90911) (389 aa) fasta scores: E(): 6.3e-25, 28.53% id in 375 aa; glycosyltransferase 2897591 3092193 BPSL2399 Burkholderia pseudomallei K96243 glycosyltransferase YP_108991.1 2896410 R 272560 CDS YP_108992.1 53720006 3094285 2898218..2899276 1 NC_006350.1 Similar to Caulobacter crescentus hypothetical protein cc1957 SWALL:Q9A6W9 (EMBL:AE005869) (337 aa) fasta scores: E(): 2e-79, 65.57% id in 337 aa, and to Yersinia pestis hypothetical protein ypo3484 SWALL:Q8ZBD2 (EMBL:AJ414157) (351 aa) fasta scores: E(): 4.6e-74, 63.22% id in 329 aa; luciferase-like monooxygenase 2899276 3094285 BPSL2400 Burkholderia pseudomallei K96243 luciferase-like monooxygenase YP_108992.1 2898218 D 272560 CDS YP_108993.1 53720007 3094286 complement(2899747..2900775) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable hydrolytic enzyme pa3053 SWALL:Q9HZF5 (EMBL:AE004730) (335 aa) fasta scores: E(): 2.2e-83, 68.06% id in 310 aa, and to Xanthomonas campestris hydrolase xcc2854 SWALL:AAM42126 (EMBL:AE012398) (331 aa) fasta scores: E(): 2.4e-75, 61.53% id in 312 aa. CDS is extended at the C-terminus in comparison to orthologues; hydrolase 2900775 3094286 BPSL2401 Burkholderia pseudomallei K96243 hydrolase YP_108993.1 2899747 R 272560 CDS YP_108994.1 53720008 3094845 2901316..2902179 1 NC_006350.1 Similar to Escherichia coli pyridoxamine kinase PdxY SWALL:PDXY_ECOLI (SWALL:P77150) (287 aa) fasta scores: E(): 4.5e-52, 52.98% id in 285 aa, and to Pseudomonas aeruginosa pyridoxamine kinase pa5516 SWALL:Q9HT57 (EMBL:AE004964) (288 aa) fasta scores: E(): 2.6e-53, 52.85% id in 280 aa; pyridoxamine kinase 2902179 pdxY 3094845 pdxY Burkholderia pseudomallei K96243 pyridoxamine kinase YP_108994.1 2901316 D 272560 CDS YP_108995.1 53720009 3093316 2902870..2904972 1 NC_006350.1 Highly similar to the previously sequenced Burkholderia pseudomallei non-hemolytic phospholipase C precursor PlcN SWALL:PHLN_BURPS (SWALL:Q9RGS8) (700 aa) fasta scores: E(): 0, 97.13% id in 699 aa. Similar to Ralstonia solanacearum probable non-hemolytic phospholipase C rsc0319 or rs03286 SWALL:Q8Y2L6 (EMBL:AL646058) (700 aa) fasta scores: E(): 4.6e-184, 65.57% id in 700 aa. Similar to BPSL0338, 52.705% identity (56.632% ungapped) in 721 aa overlap; non-hemolytic phospholipase C 2904972 plcN 3093316 plcN Burkholderia pseudomallei K96243 non-hemolytic phospholipase C YP_108995.1 2902870 D 272560 CDS YP_108996.1 53720010 3094724 2905792..2906940 1 NC_006350.1 Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 6.5e-30, 34.59% id in 370 aa, and to Ralstonia solanacearum amino-acid transport signal peptide protein rsc3300 or rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 1.6e-58, 48.41% id in 378 aa; periplasmic ligand binding lipoprotein 2906940 3094724 BPSL2404 Burkholderia pseudomallei K96243 periplasmic ligand binding lipoprotein YP_108996.1 2905792 D 272560 CDS YP_108997.1 53720011 3093338 2907039..2908211 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1590 or rs02147 SWALL:Q8XPP8 (EMBL:AL646085) (398 aa) fasta scores: E(): 8.9e-91, 60.05% id in 388 aa, and to Rhizobium loti hypothetical protein mll4416 SWALL:Q98E45 (EMBL:AP003004) (388 aa) fasta scores: E(): 6.2e-68, 46.03% id in 391 aa; FAD dependent oxidoreductase 2908211 3093338 BPSL2405 Burkholderia pseudomallei K96243 FAD dependent oxidoreductase YP_108997.1 2907039 D 272560 CDS YP_108998.1 53720012 3093339 complement(2908367..2908828) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4828 SWALL:Q9HUY2 (EMBL:AE004896) (151 aa) fasta scores: E(): 6.7e-09, 32.43% id in 148 aa, and to Synechocystis sp. hypothetical protein slr1186 SWALL:P74715 (EMBL:D90917) (148 aa) fasta scores: E(): 8.4e-07, 30.46% id in 151 aa; hypothetical protein 2908828 3093339 BPSL2406 Burkholderia pseudomallei K96243 hypothetical protein YP_108998.1 2908367 R 272560 CDS YP_108999.1 53720013 3091904 complement(2908884..2909855) 1 NC_006350.1 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Pseudomonas chlororaphis protein PhaF SWALL:Q8VV54 (EMBL:AB049413) (275 aa) fasta scores: E(): 0.02, 33.53% id in 167 aa. CDS contains an alanine rich C-terminal region; hypothetical protein 2909855 3091904 BPSL2407 Burkholderia pseudomallei K96243 hypothetical protein YP_108999.1 2908884 R 272560 CDS YP_109000.1 53720014 3091905 complement(2910122..2911186) 1 NC_006350.1 Similar to Rhizobium meliloti hypothetical sugar transferase rb0117 or smb20117 SWALL:Q92X45 (EMBL:AL603642) (366 aa) fasta scores: E(): 1.1e-76, 61.76% id in 340 aa, and to Rhizobium meliloti glycosyltransferase rb1021 or smb21581 SWALL:Q92US1 (EMBL:AL603645) (363 aa) fasta scores: E(): 6.6e-72, 58.65% id in 341 aa. Similar to BPSL1444, 71.105% identity (71.307% ungapped) in 353 aa overlap, and to BPSL3312, 68.362% identity (68.362% ungapped) in 354 aa overlap; group 1 glycosyl transferase 2911186 3091905 BPSL2408 Burkholderia pseudomallei K96243 group 1 glycosyl transferase YP_109000.1 2910122 R 272560 CDS YP_109001.1 53720015 3092643 2911753..2913618 1 NC_006350.1 Similar to Xanthomonas axonopodis ATP binding transporter 1 xac3744 SWALL:AAM38587 (EMBL:AE012024) (591 aa) fasta scores: E(): 2.6e-89, 46.04% id in 582 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase ExsA or atu4728 or AGR_L_309 SWALL:Q8U6S8 (EMBL:AE009401) (600 aa) fasta scores: E(): 4.6e-55, 37.22% id in 583 aa; ABC transporter ATP binding protein 2913618 3092643 BPSL2409 Burkholderia pseudomallei K96243 ABC transporter ATP binding protein YP_109001.1 2911753 D 272560 CDS YP_109002.1 53720016 3092836 complement(2913647..2915056) 1 NC_006350.1 Similar to Escherichia coli alpha,alpha-trehalose-phosphate synthase [UDP-forming] OtsA SWALL:OTSA_ECOLI (SWALL:P31677) (473 aa) fasta scores: E(): 1.2e-97, 52.12% id in 470 aa, and to Ralstonia solanacearum probable alpha,alpha-trehalose-phosphate synthase rsp1105 or rs02613 SWALL:Q8XQW3 (EMBL:AL646082) (465 aa) fasta scores: E(): 1.5e-120, 62.39% id in 468 aa. Similar to BPSL1044, 61.864% identity (62.931% ungapped) in 472 aa overlap; alpha,alpha-trehalose-phosphate synthase 2915056 otsA 3092836 otsA Burkholderia pseudomallei K96243 alpha,alpha-trehalose-phosphate synthase YP_109002.1 2913647 R 272560 CDS YP_109003.1 53720017 3093035 complement(2915053..2915862) 1 NC_006350.1 Similar to Escherichia coli trehalose-phosphatase OtsB SWALL:OTSB_ECOLI (SWALL:P31678) (266 aa) fasta scores: E(): 5.8e-32, 45.49% id in 222 aa, and to Ralstonia solanacearum probable trehalose-phosphatase rsp1104 or rs02610 SWALL:Q8XQW4 (EMBL:AL646082) (262 aa) fasta scores: E(): 1.6e-38, 49.6% id in 254 aa. Possible alternative translational start site; trehalose-phosphatase 2915862 otsB 3093035 otsB Burkholderia pseudomallei K96243 trehalose-phosphatase YP_109003.1 2915053 R 272560 CDS YP_109004.1 53720018 3092644 2916222..2916881 1 NC_006350.1 Similar to Neisseria meningitidis lipoprotein nma1767 SWALL:Q9JTI0 (EMBL:AL162757) (217 aa) fasta scores: E(): 7.2e-18, 31.79% id in 217 aa, and to Ralstonia solanacearum probable lipoprotein rsc0373 or rs03341 SWALL:Q8Y2G3 (EMBL:AL646058) (200 aa) fasta scores: E(): 1.2e-17, 35.53% id in 197 aa. CDS is extended at the N-terminus in comparison to R. solanacearum protein and some orthologues; SCO1/SenC family protein 2916881 3092644 BPSL2412 Burkholderia pseudomallei K96243 SCO1/SenC family protein YP_109004.1 2916222 D 272560 CDS YP_109005.1 53720019 3093289 2916908..2917354 1 NC_006350.1 Similar to Vibrio cholerae hypothetical protein vca0037 SWALL:Q9KNC8 (EMBL:AE004347) (150 aa) fasta scores: E(): 1.8e-06, 29.85% id in 134 aa, and to Caulobacter crescentus hypothetical protein cc3502 SWALL:Q9A2Q4 (EMBL:AE006008) (151 aa) fasta scores: E(): 1.8e-06, 31.94% id in 144 aa; hypothetical protein 2917354 3093289 BPSL2413 Burkholderia pseudomallei K96243 hypothetical protein YP_109005.1 2916908 D 272560 CDS YP_109006.1 53720020 3093290 2917365..2918237 1 NC_006350.1 Weakly similar to Streptomyces coelicolor integral membrane protein sco1215 or 2scg58.15 SWALL:Q9FC98 (EMBL:AL391017) (316 aa) fasta scores: E(): 3.1e-10, 25.71% id in 280 aa, and to the C-terminal region of Mycobacterium leprae hypothetical protein ml1998 SWALL:Y102_MYCLE (SWALL:P53525) (659 aa) fasta scores: E(): 7e-09, 25.08% id in 291 aa; hypothetical protein 2918237 3093290 BPSL2414 Burkholderia pseudomallei K96243 hypothetical protein YP_109006.1 2917365 D 272560 CDS YP_109007.1 53720021 3093269 complement(2918372..2918875) 1 NC_006350.1 Similar to Xanthomonas campestris ElaA protein xcc3490 SWALL:AAM42760 (EMBL:AE012468) (166 aa) fasta scores: E(): 1.9e-20, 45.57% id in 147 aa, and to Pseudomonas aeruginosa hypothetical protein pa0115 SWALL:Q9I717 (EMBL:AE004449) (150 aa) fasta scores: E(): 4.1e-19, 44.21% id in 147 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 2918875 3093269 BPSL2415 Burkholderia pseudomallei K96243 hypothetical protein YP_109007.1 2918372 R 272560 CDS YP_109008.1 53720022 3093270 complement(2919089..2919955) 1 NC_006350.1 Similar to Homo sapiens Pirin, a novel highly conserved nuclear protein, Pir SWALL:PIR_HUMAN (SWALL:O00625) (290 aa) fasta scores: E(): 2.7e-24, 37.59% id in 258 aa, and to Yersinia pestis hypothetical protein ypo2149 SWALL:Q8ZEL5 (EMBL:AJ414151) (289 aa) fasta scores: E(): 7.2e-80, 67.48% id in 286 aa; hypothetical protein 2919955 3093270 BPSL2416 Burkholderia pseudomallei K96243 hypothetical protein YP_109008.1 2919089 R 272560 CDS YP_109009.1 53720023 3093640 2920082..2920990 1 NC_006350.1 Similar to Yersinia pestis LysR-family transcriptional regulatory protein ypo2150 SWALL:Q8ZEL4 (EMBL:AJ414151) (301 aa) fasta scores: E(): 2.4e-76, 66% id in 300 aa, and to Salmonella typhimurium, and Salmonella typhi LysR family transcriptional regulator stm0952 or Act or sty0950 SWALL:Q8XET3 (EMBL:AE008740) (303 aa) fasta scores: E(): 1.9e-70, 61.61% id in 297 aa; LysR family transcriptional regulator 2920990 3093640 BPSL2417 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_109009.1 2920082 D 272560 CDS YP_109010.1 53720024 3093641 2921155..2921667 1 NC_006350.1 Similar to Xanthomonas axonopodis hypothetical protein xac3617 SWALL:AAM38460 (EMBL:AE012012) (162 aa) fasta scores: E(): 4e-38, 65.4% id in 159 aa, and to Xylella fastidiosa hypothetical protein xf1230 SWALL:Q9PDZ8 (EMBL:AE003957) (162 aa) fasta scores: E(): 8.6e-38, 65.56% id in 151 aa; hypothetical protein 2921667 3093641 BPSL2418 Burkholderia pseudomallei K96243 hypothetical protein YP_109010.1 2921155 D 272560 CDS YP_109011.1 53720025 3092636 complement(2923370..2923963) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA SWALL:PGSA_ECOLI (SWALL:P06978) (181 aa) fasta scores: E(): 7.9e-28, 48.38% id in 186 aa, and to Ralstonia solanacearum probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase transmembrane protein rsc1072 or rs04115 SWALL:Q8Y0H2 (EMBL:AL646062) (191 aa) fasta scores: E(): 1.7e-56, 73.05% id in 193 aa; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2923963 3092636 BPSL2419 Burkholderia pseudomallei K96243 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_109011.1 2923370 R 272560 CDS YP_109012.1 53720026 3092637 complement(2924091..2926328) 1 NC_006350.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2926328 uvrC 3092637 uvrC Burkholderia pseudomallei K96243 excinuclease ABC subunit C YP_109012.1 2924091 R 272560 CDS YP_109013.1 53720027 3092949 2926537..2927757 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1070 or rs04117 SWALL:Q8Y0H4 (EMBL:AL646062) (396 aa) fasta scores: E(): 5e-57, 52.95% id in 389 aa, and to Pseudomonas aeruginosa hypothetical protein pa2852 SWALL:Q9HZZ1 (EMBL:AE004711) (376 aa) fasta scores: E(): 2.5e-56, 47.45% id in 373 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 2927757 3092949 BPSL2421 Burkholderia pseudomallei K96243 hypothetical protein YP_109013.1 2926537 D 272560 CDS YP_109014.1 53720028 3092950 2927947..2928504 1 NC_006350.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2928504 3092950 BPSL2422 Burkholderia pseudomallei K96243 elongation factor P YP_109014.1 2927947 D 272560 CDS YP_109015.1 53720029 3092540 2928775..2930172 1 NC_006350.1 Similar to Ralstonia solanacearum probable sigma-54 interacting response regulator transcription regulator protein rsp1667 or rs02226 SWALL:Q8XPH3 (EMBL:AL646086) (491 aa) fasta scores: E(): 1.1e-34, 48.91% id in 460 aa. C-terminus is similar to the C-terminal region of Escherichia coli propionate catabolism operon regulatory protein PrpR SWALL:PRPR_ECOLI (SWALL:P77743) (528 aa) fasta scores: E(): 3.3e-25, 35.19% id in 341 aa. R. solanacearum is extended at the N-terminus in comparison to CDS; sigma-54 interacting response regulator protein 2930172 3092540 BPSL2423 Burkholderia pseudomallei K96243 sigma-54 interacting response regulator protein YP_109015.1 2928775 D 272560 CDS YP_109016.1 53720030 3092541 complement(2930286..2931314) 1 NC_006350.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 2931314 3092541 BPSL2424 Burkholderia pseudomallei K96243 beta-hexosaminidase YP_109016.1 2930286 R 272560 CDS YP_109017.1 53720031 3094856 complement(2931342..2931773) 1 NC_006350.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2931773 acpS 3094856 acpS Burkholderia pseudomallei K96243 4'-phosphopantetheinyl transferase YP_109017.1 2931342 R 272560 CDS YP_109018.1 53720032 3094844 complement(2931779..2932552) 1 NC_006350.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2932552 pdxJ 3094844 pdxJ Burkholderia pseudomallei K96243 pyridoxine 5'-phosphate synthase YP_109018.1 2931779 R 272560 CDS YP_109019.2 161723199 3092366 complement(2932549..2933409) 1 NC_006350.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 2933409 recO 3092366 recO Burkholderia pseudomallei K96243 DNA repair protein RecO YP_109019.2 2932549 R 272560 CDS YP_109020.1 53720034 3093107 complement(2933396..2934295) 1 NC_006350.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 2934295 era 3093107 era Burkholderia pseudomallei K96243 GTP-binding protein Era YP_109020.1 2933396 R 272560 CDS YP_109021.1 53720035 3092548 complement(2934365..2935768) 1 NC_006350.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 2935768 rnc 3092548 rnc Burkholderia pseudomallei K96243 ribonuclease III YP_109021.1 2934365 R 272560 CDS YP_109022.1 53720036 3091965 complement(2935919..2936812) 1 NC_006350.1 Similar to Escherichia coli signal peptidase I LepB SWALL:LEP_ECOLI (SWALL:P00803) (324 aa) fasta scores: E(): 4.5e-22, 43.43% id in 320 aa, and to Ralstonia solanacearum probable signal peptidase I rsc1061 or rs04147 SWALL:Q8Y0I3 (EMBL:AL646062) (305 aa) fasta scores: E(): 6.2e-77, 64.05% id in 306 aa; signal peptidase I 2936812 lepB 3091965 lepB Burkholderia pseudomallei K96243 signal peptidase I YP_109022.1 2935919 R 272560 CDS YP_109023.1 53720037 3091676 complement(2936828..2938621) 1 NC_006350.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2938621 lepA 3091676 lepA Burkholderia pseudomallei K96243 GTP-binding protein LepA YP_109023.1 2936828 R 272560 CDS YP_109024.1 53720038 3094857 complement(2938862..2939116) 1 NC_006350.1 Similar to Neisseria meningitidis thioredoxin nma0966 SWALL:Q9JV75 (EMBL:AL162754) (77 aa) fasta scores: E(): 4.3e-08, 42.1% id in 76 aa. Weakly similar to Corynebacterium nephridii thioredoxin c-1 SWALL:THI1_CORNE (SWALL:P00275) (105 aa) fasta scores: E(): 1.6, 35.18% id in 54 aa; hypothetical protein 2939116 3094857 BPSL2432 Burkholderia pseudomallei K96243 hypothetical protein YP_109024.1 2938862 R 272560 CDS YP_109025.1 53720039 3094614 complement(2939113..2940570) 1 NC_006350.1 Similar to Pseudomonas aeruginosa serine protease MucD SWALL:Q57155 (EMBL:U49151) (474 aa) fasta scores: E(): 1.5e-72, 51.08% id in 460 aa, and to Ralstonia solanacearum probable periplasmic protease signal peptide protein rsc1058 or rs04156 SWALL:Q8Y0I6 (EMBL:AL646062) (505 aa) fasta scores: E(): 2.4e-101, 64.25% id in 470 aa; peptidase 2940570 3094614 BPSL2433 Burkholderia pseudomallei K96243 peptidase YP_109025.1 2939113 R 272560 CDS YP_109026.1 53720040 3094615 complement(2940638..2941690) 1 NC_006350.1 Similar to Pseudomonas aeruginosa sigma factor AlgU regulatory protein MucB or AlgN SWALL:MUCB_PSEAE (SWALL:P38108) (316 aa) fasta scores: E(): 1.4e-11, 30.31% id in 320 aa, and to Escherichia coli, and Escherichia coli O157:H7 sigma E factor regulatory protein rseb precursor RseB SWALL:RSEB_ECOLI (SWALL:P46186) (318 aa) fasta scores: E(): 0.016, 27.45% id in 306 aa; sigma E factor regulatory protein 2941690 3094615 BPSL2434 Burkholderia pseudomallei K96243 sigma E factor regulatory protein YP_109026.1 2940638 R 272560 CDS YP_109027.1 53720041 3091492 complement(2941696..2942298) 1 NC_006350.1 Similar to Pseudomonas aeruginosa sigma factor AlgU negative regulatory protein MucA SWALL:MUCA_PSEAE (SWALL:P38107) (194 aa) fasta scores: E(): 0.18, 30.61% id in 196 aa, and to Escherichia coli sigma E factor negative regulatory protein RseA or MclA SWALL:RSEA_ECOLI (SWALL:P38106) (216 aa) fasta scores: E(): 0.26, 28.95% id in 221 aa; sigma E factor negative regulatory protein 2942298 3091492 BPSL2435 Burkholderia pseudomallei K96243 sigma E factor negative regulatory protein YP_109027.1 2941696 R 272560 CDS YP_109028.1 53720042 3092349 complement(2942382..2942981) 1 NC_006350.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 2942981 rpoE 3092349 rpoE Burkholderia pseudomallei K96243 RNA polymerase sigma factor RpoE YP_109028.1 2942382 R 272560 CDS YP_109029.1 53720043 3091493 complement(2943087..2943560) 1 NC_006350.1 hypothetical protein 2943560 3091493 BPSL2437 Burkholderia pseudomallei K96243 hypothetical protein YP_109029.1 2943087 R 272560 CDS YP_109030.1 53720044 3092217 complement(2943572..2944810) 1 NC_006350.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 2944810 fabF 3092217 fabF Burkholderia pseudomallei K96243 3-oxoacyl-ACP synthase YP_109030.1 2943572 R 272560 CDS YP_109031.1 53720045 3092505 complement(2944967..2945206) 1 NC_006350.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2945206 acpP 3092505 acpP Burkholderia pseudomallei K96243 acyl carrier protein YP_109031.1 2944967 R 272560 CDS YP_109032.1 53720046 3091516 complement(2945350..2946099) 1 NC_006350.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2946099 fabG 3091516 fabG Burkholderia pseudomallei K96243 3-ketoacyl-ACP reductase YP_109032.1 2945350 R 272560 CDS YP_109033.1 53720047 3092873 complement(2946150..2947082) 1 NC_006350.1 Similar to Escherichia coli malonyl CoA-acyl carrier protein transacylase fabD or TfpA SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 4.4e-56, 54.72% id in 307 aa, and to Ralstonia solanacearum probable malonyl CoA-[acyl-carrier-protein] transacylase rsc1051 or rs04178 SWALL:Q8Y0J3 (EMBL:AL646062) (309 aa) fasta scores: E(): 8.2e-89, 81.31% id in 305 aa; ACP S-malonyltransferase 2947082 fabD 3092873 fabD Burkholderia pseudomallei K96243 ACP S-malonyltransferase YP_109033.1 2946150 R 272560 CDS YP_109034.1 53720048 3091517 complement(2947153..2948142) 1 NC_006350.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 2948142 fabH 3091517 fabH Burkholderia pseudomallei K96243 3-oxoacyl-ACP synthase YP_109034.1 2947153 R 272560 CDS YP_109035.1 53720049 3094277 complement(2948142..2949248) 1 NC_006350.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 2949248 3094277 BPSL2443 Burkholderia pseudomallei K96243 glycerol-3-phosphate acyltransferase PlsX YP_109035.1 2948142 R 272560 CDS YP_109036.1 53720050 3092457 complement(2949388..2949567) 1 NC_006350.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 2949567 rpmF 3092457 rpmF Burkholderia pseudomallei K96243 50S ribosomal protein L32 YP_109036.1 2949388 R 272560 CDS YP_109037.1 53720051 3094278 complement(2949664..2950296) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1047 or rs04197 SWALL:Q8Y0J7 (EMBL:AL646062) (179 aa) fasta scores: E(): 8e-22, 39.37% id in 193 aa, and to Pseudomonas aeruginosa hypothetical protein pa2971 SWALL:Q9HZN3 (EMBL:AE004723) (178 aa) fasta scores: E(): 1e-05, 27.83% id in 194 aa; hypothetical protein 2950296 3094278 BPSL2445 Burkholderia pseudomallei K96243 hypothetical protein YP_109037.1 2949664 R 272560 CDS YP_109038.1 53720052 3092699 2950540..2951187 1 NC_006350.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2951187 maf 3092699 maf Burkholderia pseudomallei K96243 Maf-like protein YP_109038.1 2950540 D 272560 CDS YP_109039.1 53720053 3092700 2951184..2951906 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1045 or rs04205 SWALL:Q8Y0J8 (EMBL:AL646062) (243 aa) fasta scores: E(): 1e-50, 63.26% id in 245 aa, and to Neisseria meningitidis hypothetical protein nmb1908 SWALL:Q9JXS3 (EMBL:AE002540) (241 aa) fasta scores: E(): 5.3e-38, 51.25% id in 240 aa; hypothetical protein 2951906 3092700 BPSL2447 Burkholderia pseudomallei K96243 hypothetical protein YP_109039.1 2951184 D 272560 CDS YP_109040.1 53720054 3092439 complement(2951945..2952946) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable peptidase pa2973 SWALL:Q9HZN1 (EMBL:AE004723) (326 aa) fasta scores: E(): 2.9e-53, 50.29% id in 338 aa, and to Neisseria meningitidis protease nmb2127 SWALL:Q9JXC3 (EMBL:AE002560) (328 aa) fasta scores: E(): 1.4e-46, 45.88% id in 316 aa; peptidase 2952946 3092439 BPSL2448 Burkholderia pseudomallei K96243 peptidase YP_109040.1 2951945 R 272560 CDS YP_109041.1 53720055 3092440 complement(2952956..2953351) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1043 or rs04207 SWALL:Q8Y0K0 (EMBL:AL646062) (138 aa) fasta scores: E(): 7.4e-30, 63.93% id in 122 aa. Weakly similar to Burkholderia cepacia biphenyl dioxygenase system ferredoxin component BphF SWALL:BPHF_BURCE (SWALL:P37332) (109 aa) fasta scores: E(): 2.8, 25.8% id in 93 aa; Rieske iron-sulfur protein 2953351 3092440 BPSL2449 Burkholderia pseudomallei K96243 Rieske iron-sulfur protein YP_109041.1 2952956 R 272560 CDS YP_109042.1 53720056 3091435 complement(2953348..2954007) 1 NC_006350.1 Similar to Alcaligenes eutrophus plasmid phosphoglycolate phosphatase CbbZp SWALL:GPHP_ALCEU (SWALL:P40853) (231 aa) fasta scores: E(): 5e-07, 31.94% id in 216 aa, and to Ralstonia solanacearum phosphoglycolate phosphatase rsc1042 or rs04208 SWALL:Q8Y0K1 (EMBL:AL646062) (219 aa) fasta scores: E(): 2.2e-53, 69.4% id in 219 aa; haloacid dehalogenase 2954007 3091435 BPSL2450 Burkholderia pseudomallei K96243 haloacid dehalogenase YP_109042.1 2953348 R 272560 CDS YP_109043.1 53720057 3094628 complement(2954013..2955020) 1 NC_006350.1 Similar to Escherichia coli ribosomal large subunit pseudouridine synthase C RluC SWALL:RLUC_ECOLI (SWALL:P23851) (319 aa) fasta scores: E(): 5.2e-54, 50.94% id in 318 aa, and to Ralstonia solanacearum probable ribosomal large subunit pseudouridine synthase C protein rsc1041 or rs04757 SWALL:Q8Y0K2 (EMBL:AL646062) (331 aa) fasta scores: E(): 2e-84, 70.28% id in 313 aa; ribosomal large subunit pseudouridine synthase C 2955020 rluC 3094628 rluC Burkholderia pseudomallei K96243 ribosomal large subunit pseudouridine synthase C YP_109043.1 2954013 R 272560 CDS YP_109044.1 53720058 3091436 2955743..2959009 1 NC_006350.1 Similar to Escherichia coli ribonuclease E Rne or Ams or Hmp1 or b1084 SWALL:RNE_ECOLI (SWALL:P21513) (1061 aa) fasta scores: E(): 8.5e-87, 44.09% id in 1100 aa, and to Ralstonia solanacearum probable ribonuclease E rsc1040 or rs04210 SWALL:Q8Y0K3 (EMBL:AL646062) (1014 aa) fasta scores: E(): 1.7e-134, 60.6% id in 1122 aa. CDS is extended at the C-terminus in comparison to E. coli protein; ribonuclease E 2959009 3091436 BPSL2452 Burkholderia pseudomallei K96243 ribonuclease E YP_109044.1 2955743 D 272560 CDS YP_109045.1 53720059 3093570 2959179..2960261 1 NC_006350.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2960261 moaA 3093570 moaA Burkholderia pseudomallei K96243 molybdenum cofactor biosynthesis protein A YP_109045.1 2959179 D 272560 CDS YP_109046.1 53720060 3093571 2960277..2960918 1 NC_006350.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2960918 mobA 3093571 mobA Burkholderia pseudomallei K96243 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_109046.1 2960277 D 272560 CDS YP_109047.1 53720061 3093051 2961030..2962328 1 NC_006350.1 Similar to Escherichia coli molybdopterin biosynthesis protein MoeA or ChlE or BisB or NarE or b0827 SWALL:MOEA_ECOLI (SWALL:P12281) (411 aa) fasta scores: E(): 1.4e-55, 44.31% id in 413 aa, and to Ralstonia solanacearum probable molybdopterin biosynthesis protein rsc1037 or rs04213 SWALL:Q8Y0K6 (EMBL:AL646062) (429 aa) fasta scores: E(): 4.9e-79, 56.35% id in 433 aa; molybdopterin biosynthesis protein 2962328 3093051 BPSL2455 Burkholderia pseudomallei K96243 molybdopterin biosynthesis protein YP_109047.1 2961030 D 272560 CDS YP_109048.1 53720062 3093052 2962365..2962652 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1036 or rs04214 SWALL:Q8Y0K7 (EMBL:AL646062) (101 aa) fasta scores: E(): 1.6e-15, 55.31% id in 94 aa; hypothetical protein 2962652 3093052 BPSL2456 Burkholderia pseudomallei K96243 hypothetical protein YP_109048.1 2962365 D 272560 CDS YP_109049.1 53720063 3091637 2962649..2963152 1 NC_006350.1 Similar to Sus scrofa diamine acetyltransferase SAT SWALL:ATDA_PIG (SWALL:Q28999) (171 aa) fasta scores: E(): 3.3e-17, 35.36% id in 164 aa, and to Ralstonia solanacearum acetyltransferase rsc2565 or rs00758 SWALL:Q8XWA9 (EMBL:AL646070) (177 aa) fasta scores: E(): 1.2e-32, 56.86% id in 153 aa; acetyltransferase 2963152 3091637 BPSL2457 Burkholderia pseudomallei K96243 acetyltransferase YP_109049.1 2962649 D 272560 CDS YP_109050.1 53720064 3091638 complement(2963387..2964862) 1 NC_006350.1 No significant database matches to the full length CDS. C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc1035 or rs04215 SWALL:Q8Y0K8 (EMBL:AL646062) (457 aa) fasta scores: E(): 8.6e-103, 70.87% id in 460 aa, and Xanthomonas axonopodis hypothetical protein xac4348 SWALL:AAM39178 (EMBL:AE012089) (480 aa) fasta scores: E(): 2.1e-76, 55.12% id in 468 aa; hypothetical protein 2964862 3091638 BPSL2458 Burkholderia pseudomallei K96243 hypothetical protein YP_109050.1 2963387 R 272560 CDS YP_109051.1 53720065 3091694 complement(2964859..2965848) 1 NC_006350.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 2965848 3091694 BPSL2459 Burkholderia pseudomallei K96243 2-hydroxyacid dehydrogenase YP_109051.1 2964859 R 272560 CDS YP_109052.1 53720066 3091695 complement(2965914..2967356) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1033 or rs04217 SWALL:Q8Y0L0 (EMBL:AL646062) (478 aa) fasta scores: E(): 4.4e-116, 66.95% id in 454 aa, and to Neisseria meningitidis hypothetical protein nmb0570 SWALL:Q9K0M2 (EMBL:AE002413) (473 aa) fasta scores: E(): 5e-101, 58.51% id in 458 aa; hypothetical protein 2967356 3091695 BPSL2460 Burkholderia pseudomallei K96243 hypothetical protein YP_109052.1 2965914 R 272560 CDS YP_109053.1 53720067 3091462 complement(2967412..2968134) 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc1032 or rs04218 SWALL:Q8Y0L1 (EMBL:AL646062) (243 aa) fasta scores: E(): 6.5e-49, 60.96% id in 228 aa, and to Bacillus halodurans hypothetical protein bh1834 SWALL:Q9KBU0 (EMBL:AP001513) (230 aa) fasta scores: E(): 4.3e-08, 30.38% id in 237 aa; hypothetical protein 2968134 3091462 BPSL2461 Burkholderia pseudomallei K96243 hypothetical protein YP_109053.1 2967412 R 272560 CDS YP_109054.1 53720068 3091463 complement(2968219..2969418) 1 NC_006350.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 2969418 3091463 BPSL2462 Burkholderia pseudomallei K96243 nicotinate phosphoribosyltransferase YP_109054.1 2968219 R 272560 CDS YP_109055.1 53720069 3092680 2969687..2970010 1 NC_006350.1 Similar to Pseudomonas stutzeri ferredoxin SWALL:FER_PSEST (SWALL:P08811) (106 aa) fasta scores: E(): 1.7e-27, 66.98% id in 106 aa, and to Ralstonia solanacearum probable ferredoxin protein rsc1114 or rs04001 SWALL:Q8Y0D0 (EMBL:AL646062) (108 aa) fasta scores: E(): 1.5e-33, 80.73% id in 109 aa. Similar to BPSL2210, 64.220% identity (65.421% ungapped) in 109 aa overlap; ferredoxin 2970010 3092680 BPSL2463 Burkholderia pseudomallei K96243 ferredoxin YP_109055.1 2969687 D 272560 CDS YP_109056.1 53720070 3092681 2970498..2970977 1 NC_006350.1 Similar to Ralstonia solanacearum CreA signal peptide protein rsc1471 or rs03836 SWALL:Q8XZD0 (EMBL:AL646064) (169 aa) fasta scores: E(): 6.2e-42, 72.36% id in 152 aa, and to Pseudomonas aeruginosa hypothetical protein pa4564 SWALL:Q9HVM0 (EMBL:AE004870) (154 aa) fasta scores: E(): 6.4e-29, 55.4% id in 148 aa; hypothetical protein 2970977 3092681 BPSL2464 Burkholderia pseudomallei K96243 hypothetical protein YP_109056.1 2970498 D 272560 CDS YP_109057.1 53720071 3091989 2971428..2972330 1 NC_006350.1 hypothetical protein 2972330 3091989 BPSL2465 Burkholderia pseudomallei K96243 hypothetical protein YP_109057.1 2971428 D 272560 CDS YP_109058.1 53720072 3091990 complement(2972515..2973039) 1 NC_006350.1 No significant database matches. CDS is alanine rich and contains a polar C-terminal region; hypothetical protein 2973039 3091990 BPSL2466 Burkholderia pseudomallei K96243 hypothetical protein YP_109058.1 2972515 R 272560 CDS YP_109059.1 53720073 3094001 2973359..2973580 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0789 or rs05048 SWALL:Q8Y1A1 (EMBL:AL646061) (73 aa) fasta scores: E(): 5.3e-17, 66.66% id in 72 aa, and to Xanthomonas campestris hypothetical protein xcc2645 SWALL:AAM41917 (EMBL:AE012376) (80 aa) fasta scores: E(): 1.2e-12, 62.31% id in 69 aa; hypothetical protein 2973580 3094001 BPSL2467 Burkholderia pseudomallei K96243 hypothetical protein YP_109059.1 2973359 D 272560 CDS YP_109060.1 53720074 3091686 2973705..2975111 1 NC_006350.1 Similar to Burkholderia vietnamiensis probable multidrug resistance protein NorM SWALL:NORM_BURVI (SWALL:Q9F5N7) (462 aa) fasta scores: E(): 4.5e-140, 83.62% id in 458 aa, and to Rhizobium loti multidrug efflux protein mll4906 SWALL:Q98D15 (EMBL:AP003005) (467 aa) fasta scores: E(): 2.5e-52, 38.41% id in 453 aa; multidrug resistance protein 2975111 norM 3091686 norM Burkholderia pseudomallei K96243 multidrug resistance protein YP_109060.1 2973705 D 272560 CDS YP_109061.1 53720075 3091813 2975700..2977094 1 NC_006350.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2977094 fumC 3091813 fumC Burkholderia pseudomallei K96243 fumarate hydratase YP_109061.1 2975700 D 272560 CDS YP_109062.1 53720076 3094002 complement(2977573..2978079) 1 NC_006350.1 Similar to Vibrio cholerae acyl-CoA thioester hydrolase-related protein vca0941 SWALL:Q9KL09 (EMBL:AE004421) (162 aa) fasta scores: E(): 3.7e-29, 54% id in 150 aa, and to Xanthomonas campestris acyl-CoA thioester hydrolase xcc2593 SWALL:AAM41865 (EMBL:AE012371) (163 aa) fasta scores: E(): 8.1e-28, 52.74% id in 146 aa; long-chain acyl-CoA thioester hydrolase 2978079 3094002 BPSL2470 Burkholderia pseudomallei K96243 long-chain acyl-CoA thioester hydrolase YP_109062.1 2977573 R 272560 CDS YP_109063.1 53720077 3092571 complement(2978301..2978495) 1 NC_006350.1 Similar to the N-terminal region of Streptomyces coelicolor ABC transporter binding lipoprotein sc1a2.25C SWALL:Q9L216 (EMBL:AL939129) (290 aa) fasta scores: E(): 7.1, 62.5% id in 24 aa; hypothetical protein 2978495 3092571 BPSL2470A Burkholderia pseudomallei K96243 hypothetical protein YP_109063.1 2978301 R 272560 CDS YP_109064.1 53720078 3092572 2979129..2979839 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0279 SWALL:Q9I6L1 (EMBL:AE004466) (232 aa) fasta scores: E(): 7.6e-45, 56.01% id in 216 aa, and to Rhizobium loti transcriptional regulator mlr4605 SWALL:Q98DP9 (EMBL:AP003004) (224 aa) fasta scores: E(): 7.2e-28, 41.96% id in 224 aa; transcription regulator ArsR 2979839 3092572 BPSL2471 Burkholderia pseudomallei K96243 transcription regulator ArsR YP_109064.1 2979129 D 272560 CDS YP_109065.1 53720079 3094643 2979995..2982568 1 NC_006350.1 Similar to Ralstonia solanacearum prolin-rich transmembrane protein rsc3315 or rs02545 SWALL:Q8XU78 (EMBL:AL646074) (787 aa) fasta scores: E(): 3.3e-65, 45.09% id in 825 aa; proline-rich exported protein 2982568 3094643 BPSL2472 Burkholderia pseudomallei K96243 proline-rich exported protein YP_109065.1 2979995 D 272560 CDS YP_109066.1 53720080 3094644 complement(2982658..2983629) 1 NC_006350.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2983629 thyA 3094644 thyA Burkholderia pseudomallei K96243 thymidylate synthase YP_109066.1 2982658 R 272560 CDS YP_109067.1 53720081 3093920 complement(2983686..2985071) 1 NC_006350.1 Similar to Escherichia coli transcriptional regulatory protein ZraR or HydG or b4004 SWALL:ZRAR_ECOLI (SWALL:P14375) (441 aa) fasta scores: E(): 1.4e-48, 40% id in 430 aa, and to Ralstonia solanacearum sigma-54 interacting transcription regulator protein rsc1186 or rs05718 SWALL:Q8Y058 (EMBL:AL646063) (458 aa) fasta scores: E(): 1.7e-88, 55.75% id in 443 aa. Similar to BPSL2475, 61.674% identity (62.780% ungapped) in 454 aa overlap, and to BPSL0609, 58.652% identity (60.277% ungapped) in 445 aa overlap; sigma-54 interacting regulatory protein 2985071 3093920 BPSL2474 Burkholderia pseudomallei K96243 sigma-54 interacting regulatory protein YP_109067.1 2983686 R 272560 CDS YP_109068.1 53720082 3093921 2985594..2985962 1 NC_006350.1 Poor database matches. Weakly similar to Rhizobium loti hypothetical protein MLL1184 SWALL:Q98L44 (EMBL:AP002996) (143 aa) fasta scores: E(): 6, 35.71% id in 70 aa; hypothetical protein 2985962 3093921 BPSL2474A Burkholderia pseudomallei K96243 hypothetical protein YP_109068.1 2985594 D 272560 CDS YP_109069.1 53720083 3094231 2985959..2987236 1 NC_006350.1 Poor database matches. Weakly similar to the C-terminal region of Streptomyces aureofaciens synthase PhaC SWALL:Q8GFF3 (EMBL:AY032926) (813 aa) fasta scores: E(): 0.0036, 28.86% id in 433 aa; hypothetical protein 2987236 3094231 BPSL2474B Burkholderia pseudomallei K96243 hypothetical protein YP_109069.1 2985959 D 272560 CDS YP_109070.1 53720084 3094232 2987882..2989342 1 NC_006350.1 Similar to Escherichia coli transcriptional regulatory protein ZraR or HydG or b4004 SWALL:ZRAR_ECOLI (SWALL:P14375) (441 aa) fasta scores: E(): 2.3e-45, 39.39% id in 429 aa, and to Ralstonia solanacearum sigma-54 interacting transcription regulator protein rsc1186 or rs05718 SWALL:Q8Y058 (EMBL:AL646063) (458 aa) fasta scores: E(): 2.3e-84, 53.62% id in 442 aa. Similar to BPSL2474,61.504% identity (62.054% ungapped) in 452 aa overlap, and to BPSL0609, 55.928% identity (57.208% ungapped) in 447 aa overlap. CDS is extended at the N-terminus in comparison to orthologuesand paralogues; sigma-54 dependent regulatory protein 2989342 3094232 BPSL2475 Burkholderia pseudomallei K96243 sigma-54 dependent regulatory protein YP_109070.1 2987882 D 272560 CDS YP_109071.1 53720085 3094259 2989550..2990053 1 NC_006350.1 Similar to Escherichia coli dihydrofolate reductase FolA or TmrA or b0048 SWALL:DYR_ECOLI (SWALL:P00379) (159 aa) fasta scores: E(): 4e-22, 45.34% id in 161 aa, and to Ralstonia solanacearum probable dihydrofolate reductase oxidoreductase rsc0946 or rs04449 SWALL:Q8Y0U7 (EMBL:AL646061) (167 aa) fasta scores: E(): 1.2e-42, 72.39% id in 163 aa; dihydrofolate reductase 2990053 3094259 BPSL2476 Burkholderia pseudomallei K96243 dihydrofolate reductase YP_109071.1 2989550 D 272560 CDS YP_109072.1 53720086 3094260 2990180..2991643 1 NC_006350.1 Similar to Thermoanaerobacter tengcongensis transposase TTE0846 SWALL:Q8RBH2 (EMBL:AE013051) (492 aa) fasta scores: E(): 3.2e-74, 43.54% id in 457 aa, and to Pseudomonas sp. transposase TnpA SWALL:Q936Y1 (EMBL:U66917) (456 aa) fasta scores: E(): 1.6e-32, 31.09% id in 476 aa; transposase 2991643 3094260 BPSL2477 Burkholderia pseudomallei K96243 transposase YP_109072.1 2990180 D 272560 CDS YP_109073.1 53720087 3094761 complement(2991780..2993150) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 PmbA protein b4235 or z5845 or ecs5212 SWALL:PMBA_ECOLI (SWALL:P24231) (450 aa) fasta scores: E(): 1e-74, 47.65% id in 426 aa, and to Ralstonia solanacearum PmbA protein rsc0945 or rs04460 SWALL:Q8Y0U8 (EMBL:AL646061) (457 aa) fasta scores: E(): 1.3e-136, 75.71% id in 457 aa; microcin-processing peptidase 2993150 3094761 BPSL2478 Burkholderia pseudomallei K96243 microcin-processing peptidase YP_109073.1 2991780 R 272560 CDS YP_109074.1 53720088 3094762 2993296..2993904 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0944 or rs04461 SWALL:Q8Y0U9 (EMBL:AL646061) (208 aa) fasta scores: E(): 2.8e-32, 52.65% id in 207 aa, and to Vibrio cholerae hypothetical protein vc2536 SWALL:Q9KP43 (EMBL:AE004323) (193 aa) fasta scores: E(): 2.9e-18, 38.91% id in 203 aa; hypothetical protein 2993904 3094762 BPSL2479 Burkholderia pseudomallei K96243 hypothetical protein YP_109074.1 2993296 D 272560 CDS YP_109075.1 53720089 3092304 2993885..2994505 1 NC_006350.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 2994505 mogA 3092304 mogA Burkholderia pseudomallei K96243 molybdenum cofactor biosynthesis protein MogA YP_109075.1 2993885 D 272560 CDS YP_109076.1 53720090 3093419 complement(2994786..2995391) 1 NC_006350.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 2995391 orn 3093419 orn Burkholderia pseudomallei K96243 oligoribonuclease YP_109076.1 2994786 R 272560 CDS YP_109077.1 53720091 3092309 2995510..2996769 1 NC_006350.1 Similar to Arabidopsis thaliana CAAX processing zinc-metallo endoprotease STE24 SWALL:Q94FS8 (EMBL:AF353722) (424 aa) fasta scores: E(): 1.5e-35, 32.93% id in 413 aa, and to Ralstonia solanacearum probable integral membrane protease transmembrane protein rsc0941 or rs04465 SWALL:Q8Y0V2 (EMBL:AL646061) (418 aa) fasta scores: E(): 1.4e-106, 64.89% id in 413 aa; peptidase 2996769 3092309 BPSL2482 Burkholderia pseudomallei K96243 peptidase YP_109077.1 2995510 D 272560 CDS YP_109078.1 53720092 3092310 2996766..2997710 1 NC_006350.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 2997710 3092310 BPSL2483 Burkholderia pseudomallei K96243 ribosome-associated GTPase YP_109078.1 2996766 D 272560 CDS YP_109079.1 53720093 3091634 2997779..2998096 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0939 or rs04472 SWALL:Q8Y0V4 (EMBL:AL646061) (104 aa) fasta scores: E(): 1.5e-12, 40.4% id in 99 aa, and to Vibrio cholerae hypothetical protein vc1724 SWALL:Q9KRB8 (EMBL:AE004250) (103 aa) fasta scores: E(): 3.9e-06, 31.86% id in 91 aa; hypothetical protein 2998096 3091634 BPSL2484 Burkholderia pseudomallei K96243 hypothetical protein YP_109079.1 2997779 D 272560 CDS YP_109080.1 53720094 3091635 complement(2998263..2999252) 1 NC_006350.1 catalyzes the formation of adenosylcobinamide-phosphate from adenosylcobyric acid; CobD/CbiB family protein 2999252 3091635 BPSL2485 Burkholderia pseudomallei K96243 CobD/CbiB family protein YP_109080.1 2998263 R 272560 CDS YP_109081.1 53720095 3093023 complement(2999302..2999985) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0937 or rs04477 SWALL:Q8Y0V6 (EMBL:AL646061) (202 aa) fasta scores: E(): 4.9e-42, 60.69% id in 201 aa, and to Brucella melitensis phosphohydrolase bmei0462 SWALL:Q8YII2 (EMBL:AE009489) (207 aa) fasta scores: E(): 8.2e-29, 48.5% id in 200 aa; hypothetical protein 2999985 3093023 BPSL2486 Burkholderia pseudomallei K96243 hypothetical protein YP_109081.1 2999302 R 272560 CDS YP_109082.1 53720096 3093024 3000900..3001490 1 NC_006350.1 hypothetical protein 3001490 3093024 BPSL2487 Burkholderia pseudomallei K96243 hypothetical protein YP_109082.1 3000900 D 272560 CDS YP_109083.1 53720097 3093019 complement(3001719..3002939) 1 NC_006350.1 Similar to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 3.6e-138, 78.32% id in 406 aa, and to Burkholderia mallei transposase Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 3.8e-162, 99.22% id in 386 aa. CDS is extended at the N-terminus in comparison to B. mallei protein; transposase 3002939 tnpA 3093019 tnpA Burkholderia pseudomallei K96243 transposase YP_109083.1 3001719 R 272560 CDS YP_109084.1 53720098 3094791 complement(3003117..3003506) 1 NC_006350.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3003506 rplS 3094791 rplS Burkholderia pseudomallei K96243 50S ribosomal protein L19 YP_109084.1 3003117 R 272560 CDS YP_109085.1 53720099 3093676 complement(3003644..3004438) 1 NC_006350.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 3004438 trmD 3093676 trmD Burkholderia pseudomallei K96243 tRNA (guanine-N(1)-)-methyltransferase YP_109085.1 3003644 R 272560 CDS YP_109086.1 53720100 3094627 complement(3004440..3005075) 1 NC_006350.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3005075 rimM 3094627 rimM Burkholderia pseudomallei K96243 16S rRNA-processing protein RimM YP_109086.1 3004440 R 272560 CDS YP_109087.1 53720101 3094357 complement(3005174..3005428) 1 NC_006350.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 3005428 rpsP 3094357 rpsP Burkholderia pseudomallei K96243 30S ribosomal protein S16 YP_109087.1 3005174 R 272560 CDS YP_109088.1 53720102 3093825 3005644..3006762 1 NC_006350.1 Similar to C-terminal region of Acetobacter liquefaciens L-sorbosone dehydrogenase SWALL:SNDH_ACELI (SWALL:Q44091) (449 aa) fasta scores: E(): 1.7e-22, 30.9% id in 385 aa, and to the full length Ralstonia solanacearum membrane-bound dehydrogenase oxidoreductase rsc0932 or rs04482 SWALL:Q8Y0W1 (EMBL:AL646061) (357 aa) fasta scores: E(): 3e-99, 68.87% id in 347 aa; hypothetical protein 3006762 3093825 BPSL2493 Burkholderia pseudomallei K96243 hypothetical protein YP_109088.1 3005644 D 272560 CDS YP_109089.1 53720103 3093826 3006869..3007336 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0929 or rs04485 SWALL:Q8Y0W4 (EMBL:AL646061) (151 aa) fasta scores: E(): 1.1e-29, 56.66% id in 150 aa; hypothetical protein 3007336 3093826 BPSL2494 Burkholderia pseudomallei K96243 hypothetical protein YP_109089.1 3006869 D 272560 CDS YP_109090.1 53720104 3092450 complement(3007371..3008528) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0928 or rs04486 SWALL:Q8Y0W5 (EMBL:AL646061) (375 aa) fasta scores: E(): 2.3e-86, 64.73% id in 363 aa, and to Xanthomonas campestris hypothetical protein xcc0015 SWALL:AAM39334 (EMBL:AE012094) (364 aa) fasta scores: E(): 1.2e-80, 58.37% id in 370 aa. Possible alternative translational start site; hypothetical protein 3008528 3092450 BPSL2495 Burkholderia pseudomallei K96243 hypothetical protein YP_109090.1 3007371 R 272560 CDS YP_109091.1 53720105 3092406 complement(3008637..3009125) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O157:H7, and Enterobacter aerogenes leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 3.9e-31, 55.55% id in 153 aa, and to Ralstonia solanacearum probable leucine-responsive regulatory DNA-binding transcription regulator protein rsc0927 or rs04487 SWALL:Q8Y0W6 (EMBL:AL646061) (165 aa) fasta scores: E(): 1.8e-46, 77.3% id in 163 aa; leucine-responsive regulatory protein 3009125 lrp 3092406 lrp Burkholderia pseudomallei K96243 leucine-responsive regulatory protein YP_109091.1 3008637 R 272560 CDS YP_109092.1 53720106 3091489 3009273..3010559 1 NC_006350.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 3010559 dadA 3091489 dadA Burkholderia pseudomallei K96243 D-amino acid dehydrogenase small subunit YP_109092.1 3009273 D 272560 CDS YP_109093.1 53720107 3092451 complement(3010673..3012463) 1 NC_006350.1 Similar to Solanum tuberosum isovaleryl-CoA dehydrogenase 1, mitochondrial precursor IVD1 SWALL:Q9FS88 (EMBL:AJ278987) (412 aa) fasta scores: E(): 4.5e-10, 26.66% id in 450 aa. N-terminal region is weakly similar to Solanum tuberosum isovaleryl-CoA dehydrogenase 1, mitochondrial precursor IVD1 SWALL:Q9FS88 (EMBL:AJ278987) (412 aa) fasta scores: E(): 4.5e-10, 26.66% id in 450 aa; acyl-CoA dehydrogenase 3012463 3092451 BPSL2498 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_109093.1 3010673 R 272560 CDS YP_109094.1 53720108 3092905 complement(3012577..3013512) 1 NC_006350.1 Similar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit EtfA or EtfL SWALL:ETFA_BRAJA (SWALL:P53573) (314 aa) fasta scores: E(): 5.7e-63, 65.59% id in 311 aa, and to Ralstonia solanacearum probable electron transfer flavoprotein etfa or rsc0924 or rs04490 SWALL:Q8Y0W9 (EMBL:AL646061) (311 aa) fasta scores: E(): 2e-80, 81.34% id in 311 aa; electron transfer flavoprotein subunit alpha 3013512 etfA 3092905 etfA Burkholderia pseudomallei K96243 electron transfer flavoprotein subunit alpha YP_109094.1 3012577 R 272560 CDS YP_109095.1 53720109 3091793 complement(3013528..3014277) 1 NC_006350.1 Similar to Bradyrhizobium japonicum electron transfer flavoprotein beta-subunit EtfB or EtfS SWALL:ETFB_BRAJA (SWALL:P53575) (249 aa) fasta scores: E(): 3.4e-55, 69.47% id in 249 aa, and to Ralstonia solanacearum probable electron transfer flavoprotein EtfB or rsc0923 or rs04491 SWALL:Q8Y0X0 (EMBL:AL646061) (249 aa) fasta scores: E(): 1.4e-70, 85.14% id in 249 aa; electron transfer flavoprotein subunit beta 3014277 etfB 3091793 etfB Burkholderia pseudomallei K96243 electron transfer flavoprotein subunit beta YP_109095.1 3013528 R 272560 CDS YP_109096.1 53720110 3094263 complement(3014504..3015298) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsc0922 or rs04493 SWALL:Q8Y0X1 (EMBL:AL646061) (266 aa) fasta scores: E(): 4.2e-62, 64.28% id in 266 aa and to Salmonella typhimurium D-methionine-binding lipoprotein MetQ precursor or stm0245 SWALL:METQ_SALTY (SWALL:Q8ZRN1) (271 aa) fasta scores: E(): 4.4e-42, 48.31% id in 267 aa; hypothetical protein 3015298 3094263 BPSL2501 Burkholderia pseudomallei K96243 hypothetical protein YP_109096.1 3014504 R 272560 CDS YP_109097.1 53720111 3094264 complement(3015372..3016025) 1 NC_006350.1 Similar to Vibrio cholerae probable D-methionine transport system permease MetI or vc0906 SWALL:METI_VIBCH (SWALL:Q9KTJ6) (225 aa) fasta scores: E(): 7.6e-42, 59.71% id in 211 aa, Ralstonia solanacearum probable transmembrane ABC transporter protein rsc0921 or rs04492 SWALL:Q8Y0X2 (EMBL:AL646061) (217 aa) fasta scores: E(): 5.3e-55, 77.41% id in 217 aa, and to Escherichia coli D-methionine transport system permease MetI or b0198 SWALL:METI_ECOLI (SWALL:P31547) (217 aa) fasta scores: E(): 1.6e-36, 54.83% id in 217 aa; ABC transporter membrane permease 3016025 3094264 BPSL2502 Burkholderia pseudomallei K96243 ABC transporter membrane permease YP_109097.1 3015372 R 272560 CDS YP_109098.1 53720112 3092979 complement(3016015..3017049) 1 NC_006350.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 3017049 metN 3092979 metN Burkholderia pseudomallei K96243 DL-methionine transporter ATP-binding subunit YP_109098.1 3016015 R 272560 CDS YP_109099.1 53720113 3092980 3017358..3018200 1 NC_006350.1 Weakly similar to several Prokaryotic and Eukaryotic hydrolases including: Mycobacterium tuberculosis possibl oxidoreductase rv0183 or mtci28.23 or mt0192 SWALL:O07427 (EMBL:Z97050) (323 aa) fasta scores: E(): 4.9e-30, 41.01% id in 256 a and to Mus musculus monoglyceride lipase mglL SWALL:O35678 (EMBL:AJ001118) (303 aa) fasta scores: E(): 1.5e-23, 33.33% id in 282 aa; hydrolase 3018200 3092980 BPSL2504 Burkholderia pseudomallei K96243 hydrolase YP_109099.1 3017358 D 272560 CDS YP_109100.1 53720114 3094456 complement(3018543..3019466) 1 NC_006350.1 Similar to many histone deacetylase-family proteins including: Ralstonia solanacearum hypothetical protein rsc0919 or rs04494 SWALL:Q8Y0X4 (EMBL:AL646061) (307 aa) fasta scores: E(): 4.5e-88, 68.19% id in 305 aa and to Xanthomonas axonopodis acetoin utilization family protein xac0869 SWALL:AAM35757 (EMBL:AE011718) (303 aa) fasta scores: E(): 5.7e-52, 47.5% id in 301 aa; histone deacetylase-family protein 3019466 3094456 BPSL2505 Burkholderia pseudomallei K96243 histone deacetylase-family protein YP_109100.1 3018543 R 272560 CDS YP_109101.1 53720115 3094457 3019594..3020946 1 NC_006350.1 Similar in the C-terminus to several e.g. Ralstonia solanacearum membrane-bound lytic murein transglycosylase B protein MltB or rsc0918 or rs04496 SWALL:Q8Y0X5 (EMBL:AL646061) (372 aa) fasta scores: E(): 9.6e-71, 62.57% id in 326 aa and to Escherichia coli membrane-bound lytic murein transglycosylase B protein MltB or b2701 SWALL:MLTB_ECOLI (SWALL:P41052) (361 aa) fasta scores: E(): 1.6e-26, 37.26% id in 373 aa. Note contains 4xqs and 7xqp repeats between codons 68-89; exported transglycosylase 3020946 3094457 BPSL2506 Burkholderia pseudomallei K96243 exported transglycosylase YP_109101.1 3019594 D 272560 CDS YP_109102.1 53720116 3092757 complement(3021173..3022075) 1 NC_006350.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 3022075 cysM 3092757 cysM Burkholderia pseudomallei K96243 cysteine synthase B YP_109102.1 3021173 R 272560 CDS YP_109103.1 53720117 3093096 complement(3022087..3022398) 1 NC_006350.1 Doubtful CDS. Poor database matches. Similar to Aeropyrum pernix hypothetical protein ape0269 SWALL:Q9YFH7 (EMBL:AP000058) (125 aa) fasta scores: E(): 1, 31.42% id in 105 aa; hypothetical protein 3022398 3093096 BPSL2507A Burkholderia pseudomallei K96243 hypothetical protein YP_109103.1 3022087 R 272560 CDS YP_109104.1 53720118 3093097 complement(3022411..3022728) 1 NC_006350.1 Similar to Neisseria gonorrhoeae hypothetical DNA-binding proein ComE SWALL:Q9EU10 (EMBL:AF268317) (99 aa) fasta scores: E(): 7.6e-06, 37.5% id in 104 aa and to Ralstonia solanacearum ComEA-related signal peptide protein rsc0916 or rs04499 SWALL:Q8Y0X7 (EMBL:AL646061) (105 aa) fasta scores: E(): 8.4e-13, 50.94% id in 106 aa; hypothetical protein 3022728 3093097 BPSL2508 Burkholderia pseudomallei K96243 hypothetical protein YP_109104.1 3022411 R 272560 CDS YP_109105.1 53720119 3092933 complement(3022800..3023792) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei ADP-glycero-mannoheptose epimerase GmhD SWALL:Q9WWX6 (EMBL:AF159428) (330 aa) fasta scores: E(): 3.6e-132, 99.09% id in 330 aa, and to Escherichia coli. Highly similar to Escherichia coli O157:H7 ADP-L-glycero-D-manno-heptose-6-epimerase RfaD or Htrm or b3619 or z5046 or ecs4497 SWALL:RFAD_ECOLI (SWALL:P17963) (310 aa) fasta scores: E(): 2.4e-52, 57.36% id in 326 aa; ADP-glycero-mannoheptose epimerase 3023792 gmhD 3092933 gmhD Burkholderia pseudomallei K96243 ADP-glycero-mannoheptose epimerase YP_109105.1 3022800 R 272560 CDS YP_109106.1 53720120 3093377 complement(3023851..3024774) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei ADP-heptose synthase WaaE SWALL:Q9WWX7 (EMBL:AF159428) (307 aa) fasta scores: E(): 3.8e-113, 100% id in 307 aa, and to Haemophilus influenzae ADP-heptose synthase RfaE or WaaE or hi1526 SWALL:RFAE_HAEIN (SWALL:O05074) (476 aa) fasta scores: E(): 9.1e-47, 49% id in 302 aa and to Escherichia coli ADP-heptose synthase RfaE or waae or b3052 SWALL:RFAE_ECOLI (SWALL:P76658) (477 aa) fasta scores: E(): 8.8e-46, 49.19% id in 309 aa; ADP-heptose synthase 3024774 waaE 3093377 waaE Burkholderia pseudomallei K96243 ADP-heptose synthase YP_109106.1 3023851 R 272560 CDS YP_109107.1 53720121 3093002 complement(3024806..3026206) 1 NC_006350.1 Highly similar to the previously sequenced Burkholderia pseudomallei UDP-glucose dehydrogenase Udg SWALL:Q9WWX8 (EMBL:AF159428) (466 aa) fasta scores: E(): 1.1e-178, 99.35% id in 466 aa, and to Pseudomonas aeruginosa UDP-glucose 6-dehydrogenase Udg or pa2022 SWALL:UDG_PSEAE (SWALL:O86422) (453 aa) fasta scores: E(): 2.6e-86, 53.39% id in 457 aa. Note: Also similar to BPSS1833 (474 aa) fasta scores: E(): 1.5e-121, 76.304% identity in 460 aa overlap; UDP-glucose dehydrogenase 3026206 udg 3093002 udg Burkholderia pseudomallei K96243 UDP-glucose dehydrogenase YP_109107.1 3024806 R 272560 CDS YP_109108.1 53720122 3093004 complement(3026327..3027496) 1 NC_006350.1 Similar to many including : Ralstonia solanacearum transmembrane protein rsc0912 or rs04503 SWALL:Q8Y0Y1 (EMBL:AL646061) (425 aa) fasta scores: E(): 1.8e-71, 56.62% id in 415 aa and Neisseria meningitidis periplasmic hypothetical protein Nma2148 SWALL:Q9JST2 (EMBL:AL162758) (389 aa) fasta scores: E(): 1.2e-49, 35.99% id in 389 aa; tetratricopeptide repeat protein 3027496 3093004 BPSL2512 Burkholderia pseudomallei K96243 tetratricopeptide repeat protein YP_109108.1 3026327 R 272560 CDS YP_109109.1 53720123 3093005 complement(3027549..3028064) 1 NC_006350.1 hypothetical protein 3028064 3093005 BPSL2513 Burkholderia pseudomallei K96243 hypothetical protein YP_109109.1 3027549 R 272560 CDS YP_109110.1 53720124 3094858 complement(3028067..3028390) 1 NC_006350.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 3028390 ihfB 3094858 ihfB Burkholderia pseudomallei K96243 integration host factor subunit beta YP_109110.1 3028067 R 272560 CDS YP_109111.1 53720125 3093073 complement(3028413..3030125) 1 NC_006350.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 3030125 rpsA 3093073 rpsA Burkholderia pseudomallei K96243 30S ribosomal protein S1 YP_109111.1 3028413 R 272560 CDS YP_109112.1 53720126 3092045 complement(3030270..3030980) 1 NC_006350.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 3030980 cmk 3092045 cmk Burkholderia pseudomallei K96243 cytidylate kinase YP_109112.1 3030270 R 272560 CDS YP_109113.2 161723198 3093876 complement(3030977..3032998) 1 NC_006350.1 fusion of tyrA/aroA; bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase 3032998 aroA/tyrA 3093876 aroA/tyrA Burkholderia pseudomallei K96243 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase YP_109113.2 3030977 R 272560 CDS YP_109114.1 53720128 3092972 complement(3033465..3034547) 1 NC_006350.1 Similar to many involved in Phenylalanine biosynthesis: Neisseria gonorrhoeae P-protein [includes: chorismate mutase (EC 5.4.99.5) (cm); prephenate dehydratase (EC 4.2.1.51) (pdt)] PheA SWALL:PHEA_NEIGO (SWALL:Q9ZHY3) (362 aa) fasta scores: E(): 1.8e-64, 50% id in 362 aa, Ralstonia solanacearum probable bifunctional protein: chorismate mutase and prephenate dehydratase PheA or rsc0904 or rs04511 SWALL:Q8Y0Y9 (EMBL:AL646061) (371 aa) fasta scores: E(): 9.6e-85, 61.45% id in 358 aa and to Pseudomonas stutzeri p-protein PheA SWALL:PHEA_PSEST (SWALL:P27603) (365 aa) fasta scores: E(): 3.4e-60, 47.2% id in 358 aa; chorismate mutase/prephenate dehydratase 3034547 pheA 3092972 pheA Burkholderia pseudomallei K96243 chorismate mutase/prephenate dehydratase YP_109114.1 3033465 R 272560 CDS YP_109115.1 53720129 3094241 complement(3034582..3035664) 1 NC_006350.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 3035664 serC 3094241 serC Burkholderia pseudomallei K96243 phosphoserine aminotransferase YP_109115.1 3034582 R 272560 CDS YP_109116.1 53720130 3092000 complement(3035838..3036434) 1 NC_006350.1 Weakyl similar to several including: Ralstonia solanacearum probable signal peptide protein rsc0902 or rs04513 SWALL:Q8Y0Z1 (EMBL:AL646061) (190 aa) fasta scores: E(): 2e-24, 49.48% id in 194 aa and to Candidatus Tremblaya princeps hypothetical protein SWALL:AAM75970 (EMBL:AF481102) (343 aa) fasta scores: E(): 4.3e-07, 29.03% id in 155 aa; hypothetical protein 3036434 3092000 BPSL2520 Burkholderia pseudomallei K96243 hypothetical protein YP_109116.1 3035838 R 272560 CDS YP_109117.1 53720131 3092481 complement(3036533..3039133) 1 NC_006350.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 3039133 gyrA 3092481 gyrA Burkholderia pseudomallei K96243 DNA gyrase subunit A YP_109117.1 3036533 R 272560 CDS YP_109118.1 53720132 3093812 3039644..3040318 1 NC_006350.1 Similar to Bordetella avium outer membrane protein A precursor OmpA SWALL:OMPA_BORAV (SWALL:Q05146) (194 aa) fasta scores: E(): 4e-30, 50% id in 218 aa and to Escherichia coli, and Escherichia coli O157:H7 outer membrane protein a precursor OmpA or TolG or z1307 or ecs1041 SWALL:OMPA_ECOLI (SWALL:P02934) (346 aa) fasta scores: E(): 4.2e-22, 53.47% id in 144 aa; outer membrane protein a 3040318 ompA 3093812 ompA Burkholderia pseudomallei K96243 outer membrane protein a YP_109118.1 3039644 D 272560 CDS YP_109119.1 53720133 3094669 3040487..3041185 1 NC_006350.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3041185 ubiG 3094669 ubiG Burkholderia pseudomallei K96243 3-demethylubiquinone-9 3-methyltransferase YP_109119.1 3040487 D 272560 CDS YP_109120.1 53720134 3092001 3041211..3041936 1 NC_006350.1 Similar to Pseudomonas aeruginosa phosphoglycolate phosphatase 2 Gph2 or pa3172 SWALL:GPH2_PSEAE (SWALL:Q9HZ62) (226 aa) fasta scores: E(): 1.5e-25, 39.43% id in 213 aa, and to Ralstonia solanacearum probable hydrolase rsc0897 or rs04518 SWALL:Q8Y0Z6 (EMBL:AL646061) (229 aa) fasta scores: E(): 3.2e-47, 62.03% id in 216 aa; phosphatase 3041936 3092001 BPSL2524 Burkholderia pseudomallei K96243 phosphatase YP_109120.1 3041211 D 272560 CDS YP_109121.1 53720135 3094167 3042586..3043272 1 NC_006350.1 Similar to several including: Rhizobium loti hypothetical protein Mlr5374 SWALL:Q98BY6 (EMBL:AP003006) (199 aa) fasta scores: E(): 9.8e-26, 47.36% id in 190 aa and to Bradyrhizobium japonicum pPmtA protein pmtA SWALL:Q9LCT2 (EMBL:Y09633) (199 aa) fasta scores: E(): 9.8e-20, 42.28% id in 201 aa; hypothetical protein 3043272 3094167 BPSL2525 Burkholderia pseudomallei K96243 hypothetical protein YP_109121.1 3042586 D 272560 CDS YP_109122.1 53720136 3094168 complement(3043453..3043716) 1 NC_006350.1 hypothetical protein 3043716 3094168 BPSL2526 Burkholderia pseudomallei K96243 hypothetical protein YP_109122.1 3043453 R 272560 CDS YP_109123.1 53720137 3093218 complement(3043818..3044924) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2092 or rs03657 SWALL:Q8XXM1 (EMBL:AL646068) (366 aa) fasta scores: E(): 9.6e-27, 33.14% id in 362 aa.Similar to the C-terminal region of Clostridium acetobutylicum molybdopterin biosynthesis enzyme, MoeA, fused to molibdopterin-binding domain cac2020 SWALL:Q97HJ1 (EMBL:AE007706) (636 aa) fasta scores: E(): 1.1e-16, 31.02% id in 303 aa. Note contains an N-terminal DNA-binding protein; regulatory protein 3044924 3093218 BPSL2527 Burkholderia pseudomallei K96243 regulatory protein YP_109123.1 3043818 R 272560 CDS YP_109124.1 53720138 3091500 3045013..3045528 1 NC_006350.1 Similar to Rhizobium meliloti NADH dehydrogenase I chain E 2 NuoE2 or ra0830 or sma1526 SWALL:NUE2_RHIME (SWALL:P56910) (168 aa) fasta scores: E(): 1.2e-08, 30.37% id in 135 aa and to Alcaligenes eutrophus NAD-dependent formate dehydrogenase gamma subunit FdsG SWALL:O87813 (EMBL:AJ223295) (176 aa) fasta scores: E(): 3.1e-22, 48.05% id in 154 aa; NAD-dependent formate dehydrogenase subunit gamma 3045528 fdsG 3091500 fdsG Burkholderia pseudomallei K96243 NAD-dependent formate dehydrogenase subunit gamma YP_109124.1 3045013 D 272560 CDS YP_109125.1 53720139 3091562 3045525..3047090 1 NC_006350.1 Similar to many including: Rhizobium loti NAD-dependent formate dehydrogenase beta subunit mll5397 SWALL:Q98BW8 (EMBL:AP003006) (518 aa) fasta scores: E(): 2.5e-125, 60.82% id in 508 aa, Alcaligenes eutrophus NAD-dependent formate dehydrogenase beta subunit FdsB SWALL:O87814 (EMBL:AJ223295) (520 aa) fasta scores: E(): 4.2e-139, 69.38% id in 516 aa and to Rhizobium meliloti NADH dehydrogenase I chain F 2 NuoF2 or ra0829 or sma1525 SWALL:NUF2_RHIME (SWALL:P56913) (421 aa) fasta scores: E(): 6.5e-64, 44.19% id in 405 aa; NAD-dependent formate dehydrogenase subunit beta 3047090 fdsB 3091562 fdsB Burkholderia pseudomallei K96243 NAD-dependent formate dehydrogenase subunit beta YP_109125.1 3045525 D 272560 CDS YP_109126.1 53720140 3092111 3047105..3050059 1 NC_006350.1 Similar to Rhizobium meliloti NAD-dependent formate dehydrogenase alpha subunit FdsA SWALL:Q9EZD3 (EMBL:AF298190) (959 aa) fasta scores: E(): 0, 71.47% id in 936 aa and to Alcaligenes eutrophus NAD-dependent formate dehydrogenase alpha subunit FdsA SWALL:O87815 (EMBL:AJ223295) (959 aa) fasta scores: E(): 0, 75.7% id in 955 aa; NAD-dependent formate dehydrogenase subunit alpha 3050059 fdsA 3092111 fdsA Burkholderia pseudomallei K96243 NAD-dependent formate dehydrogenase subunit alpha YP_109126.1 3047105 D 272560 CDS YP_109127.1 53720141 3091499 3050067..3050327 1 NC_006350.1 Weakly similar to Rhizobium loti NAD-dependent formate dehydrogenase delta subunit mll5393 SWALL:Q98BX1 (EMBL:AP003006) (102 aa) fasta scores: E(): 6e-07, 44.7% id in 85 aa; NAD-dependent formate dehydrogenase subunit delta 3050327 fdsD 3091499 fdsD Burkholderia pseudomallei K96243 NAD-dependent formate dehydrogenase subunit delta YP_109127.1 3050067 D 272560 CDS YP_109128.1 53720142 3093219 complement(3050669..3052336) 1 NC_006350.1 Similar to many oxygenases including: Streptomyces argillaceus oxygenase MtmOII SWALL:O86481 (EMBL:AJ007932) (531 aa) fasta scores: E(): 3.8e-43, 37.09% id in 558 aa and Flavobacterium sp. PcpB pcpB SWALL:Q53961 (EMBL:U60175) (538 aa) fasta scores: E(): 7.1e-40, 32.86% id in 563 aa, and to Flavobacterium sp. PcpB pcpB SWALL:AAF15368 (EMBL:U12290) (538 aa) fasta scores: E(): 1.5e-38, 32.78% id in 549 aa; oxygenase 3052336 3093219 BPSL2532 Burkholderia pseudomallei K96243 oxygenase YP_109128.1 3050669 R 272560 CDS YP_008992010.1 568335731 3093173 3052433..3054313 1 NC_006350.1 hypothetical protein 3054313 3093173 BPSL2533 Burkholderia pseudomallei K96243 hypothetical protein YP_008992010.1 3052433 D 272560 CDS YP_109130.1 53720144 3092760 complement(3054702..3055997) 1 NC_006350.1 Similar to several membrane transport proteins including: Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 2.5e-99, 62.16% id in 415 aa, and to Ralstonia solanacearum probable sugar transporter transmembrane protein rsc3059 or rs06072 SWALL:Q8XUX4 (EMBL:AL646073) (431 aa) fasta scores: E(): 6.4e-117, 71.92% id in 431 aa; citrate-proton symporter 3055997 citA 3092760 citA Burkholderia pseudomallei K96243 citrate-proton symporter YP_109130.1 3054702 R 272560 CDS YP_109131.1 53720145 3093174 complement(3056494..3057558) 1 NC_006350.1 Weakly similar to Thermoanaerobacter tengcongensis predicted glutamine amidotransferases tte2700 SWALL:Q8R6T5 (EMBL:AE013209) (245 aa) fasta scores: E(): 2.2e-13, 40.44% id in 178 aa, and to Clostridium acetobutylicum predicted glutamine amidotransferase cac1764 SWALL:Q97I88 (EMBL:AE007685) (241 aa) fasta scores: E(): 4.2e-13, 38.62% id in 189 aa; transferase 3057558 3093174 BPSL2535 Burkholderia pseudomallei K96243 transferase YP_109131.1 3056494 R 272560 CDS YP_109132.1 53720146 3094608 3058425..3059801 1 NC_006350.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3059801 3094608 BPSL2536 Burkholderia pseudomallei K96243 amidase YP_109132.1 3058425 D 272560 CDS YP_109133.1 53720147 3093150 3059910..3060419 1 NC_006350.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 3060419 dsbB 3093150 dsbB Burkholderia pseudomallei K96243 disulfide bond formation protein B YP_109133.1 3059910 D 272560 CDS YP_109134.1 53720148 3094609 3060961..3061983 1 NC_006350.1 Weakly similar to several including: Caulobacter crescentus chaperone XdhC, cc2617 SWALL:Q9A547 (EMBL:AE005929) (338 aa) fasta scores: E(): 3.2e-35, 40.06% id in 332 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1522 SWALL:Q9I3J1 (EMBL:AE004580) (279 aa) fasta scores: E(): 9.1e-27, 40.24% id in 323 aa; hypothetical protein 3061983 3094609 BPSL2538 Burkholderia pseudomallei K96243 hypothetical protein YP_109134.1 3060961 D 272560 CDS YP_109135.1 53720149 3094048 3062025..3063050 1 NC_006350.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 3063050 add 3094048 add Burkholderia pseudomallei K96243 adenosine deaminase YP_109135.1 3062025 D 272560 CDS YP_109136.1 53720150 3093934 3063112..3064524 1 NC_006350.1 Similar to several membrane proteins including: Rhizobium meliloti integral membrane transporter ra0943 or sma1717 SWALL:Q92YE1 (EMBL:AE007280) (475 aa) fasta scores: E(): 7.7e-107, 61.02% id in 449 aa, and to Xanthomonas axonopodis xanthine/uracil permease yieg or xac0309 SWALL:AAM35201 (EMBL:AE011656) (437 aa) fasta scores: E(): 5.1e-55, 39.9% id in 446 aa; hypothetical protein 3064524 3093934 BPSL2540 Burkholderia pseudomallei K96243 hypothetical protein YP_109136.1 3063112 D 272560 CDS YP_109137.1 53720151 3092042 3064550..3065860 1 NC_006350.1 Catalyzes the deamination of guanine; guanine deaminase 3065860 guaD 3092042 guaD Burkholderia pseudomallei K96243 guanine deaminase YP_109137.1 3064550 D 272560 CDS YP_109138.1 53720152 3093935 3066348..3066920 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2100 or rs01504 SWALL:Q8XXL3 (EMBL:AL646068) (204 aa) fasta scores: E(): 1.6e-44, 63.83% id in 188 aa and to Pseudomonas aeruginosa hypothetical protein Pa4629 SWALL:Q9HVG2 (EMBL:AE004877) (192 aa) fasta scores: E(): 1.1e-34, 55.13% id in 185 aa; hypothetical protein 3066920 3093935 BPSL2542 Burkholderia pseudomallei K96243 hypothetical protein YP_109138.1 3066348 D 272560 CDS YP_109139.1 53720153 3094775 complement(3067254..3067967) 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein rsc2124 or rs01480 SWALL:Q8XXI9 (EMBL:AL646068) (213 aa) fasta scores: E(): 2.4e-25, 46.26% id in 214 aa, and to Zymomonas mobilis hypothetical 23.9 kDa protein SWALL:Q9EZA0 (EMBL:AF300471) (220 aa) fasta scores: E(): 0.12, 25.48% id in 208 aa; lipoprotein 3067967 3094775 BPSL2543 Burkholderia pseudomallei K96243 lipoprotein YP_109139.1 3067254 R 272560 CDS YP_109140.1 53720154 3094776 3068188..3070890 1 NC_006350.1 Similar to Ralstonia solanacearum probable aminopeptidase N PepN or rsc2125 or rs01479 SWALL:Q8XXI8 (EMBL:AL646068) (905 aa) fasta scores: E(): 1.1e-170, 66.11% id in 906 aa and to Escherichia coli aminopeptidase N PepN or b0932 SWALL:AMPN_ECOLI (SWALL:P04825) (869 aa) fasta scores: E(): 9.5e-101, 48.6% id in 897 aa; aminopeptidase 3070890 pepN 3094776 pepN Burkholderia pseudomallei K96243 aminopeptidase YP_109140.1 3068188 D 272560 CDS YP_109141.1 53720155 3092004 complement(3071238..3073532) 1 NC_006350.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 3073532 metE 3092004 metE Burkholderia pseudomallei K96243 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_109141.1 3071238 R 272560 CDS YP_109142.1 53720156 3091761 3073649..3074581 1 NC_006350.1 Similar to Haemophilus influenzae transcriptional activator protein MetR or hi1739 SWALL:METR_HAEIN (SWALL:P45349) (309 aa) fasta scores: E(): 1.7e-64, 56.72% id in 305 aa, and to Pasteurella multocida metr metr or pm0421 SWALL:Q9CNK8 (EMBL:AE006078) (308 aa) fasta scores: E(): 1.9e-65, 56.39% id in 305 aa; transcriptional activator protein 3074581 metR 3091761 metR Burkholderia pseudomallei K96243 transcriptional activator protein YP_109142.1 3073649 D 272560 CDS YP_109143.1 53720157 3092110 3074711..3075727 1 NC_006350.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 3075727 fbp 3092110 fbp Burkholderia pseudomallei K96243 fructose-1,6-bisphosphatase YP_109143.1 3074711 D 272560 CDS YP_109144.1 53720158 3094091 3076324..3076584 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 3076584 3094091 BPSL2547A Burkholderia pseudomallei K96243 hypothetical protein YP_109144.1 3076324 D 272560 CDS YP_109145.1 53720159 3094092 3076607..3077083 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 3077083 3094092 BPSL2548 Burkholderia pseudomallei K96243 hypothetical protein YP_109145.1 3076607 D 272560 CDS YP_109146.1 53720160 3094250 3077252..3077500 1 NC_006350.1 hypothetical protein 3077500 3094250 BPSL2549 Burkholderia pseudomallei K96243 hypothetical protein YP_109146.1 3077252 D 272560 CDS YP_109147.1 53720161 3094251 3078156..3078503 1 NC_006350.1 Similar in the C-terminus to: Rhizobium loti transglycosylase associated gene msl3293 SWALL:Q98GJ9 (EMBL:AP003001) (84 aa) fasta scores: E(): 7.3e-13, 62.02% id in 79 aa and Brucella melitensis hypothetical protein Bmei0216 SWALL:Q8YJ70 (EMBL:AE009464) (84 aa) fasta scores: E(): 2.9e-12, 55.69% id in 79 aa; hypothetical protein 3078503 3094251 BPSL2550 Burkholderia pseudomallei K96243 hypothetical protein YP_109147.1 3078156 D 272560 CDS YP_109148.1 53720162 3092444 complement(3078790..3079287) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsp1269 or rs05314 SWALL:Q8XQF8 (EMBL:AL646083) (167 aa) fasta scores: E(): 1.9e-21, 51.22% id in 164 aa; hypothetical protein 3079287 3092444 BPSL2551 Burkholderia pseudomallei K96243 hypothetical protein YP_109148.1 3078790 R 272560 CDS YP_109149.1 53720163 3092445 complement(3079284..3080555) 1 NC_006350.1 Similar to Ralstonia solanacearum signal peptide protein rsp1270 or rs05315 SWALL:Q8XQF7 (EMBL:AL646083) (417 aa) fasta scores: E(): 1.8e-93, 62.75% id in 392 aa; lipoprotein 3080555 3092445 BPSL2552 Burkholderia pseudomallei K96243 lipoprotein YP_109149.1 3079284 R 272560 CDS YP_109150.1 53720164 3092253 complement(3080543..3082879) 1 NC_006350.1 Similar to Pseudomonas aeruginosa fe(III)-pyochelin receptor precursor FptA or pa4221 SWALL:FPTA_PSEAE (SWALL:P42512) (720 aa) fasta scores: E(): 2.5e-07, 25.62% id in 558 aa, and to Ralstonia solanacearum ferrisiderophore receptor protein rsp1271 or rs05316 SWALL:Q8XQF6 (EMBL:AL646083) (779 aa) fasta scores: E(): 1.2e-172, 59.42% id in 769 aa; siderophore receptor protein 3082879 3092253 BPSL2553 Burkholderia pseudomallei K96243 siderophore receptor protein YP_109150.1 3080543 R 272560 CDS YP_109151.1 53720165 3092254 complement(3083026..3083502) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp1272 or rs05317 SWALL:Q8XQF5 (EMBL:AL646083) (155 aa) fasta scores: E(): 1.2e-14, 45.63% id in 149 aa; hypothetical protein 3083502 3092254 BPSL2554 Burkholderia pseudomallei K96243 hypothetical protein YP_109151.1 3083026 R 272560 CDS YP_109152.1 53720166 3092729 3084028..3084621 1 NC_006350.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 3084621 3092729 BPSL2555 Burkholderia pseudomallei K96243 chorismate mutase YP_109152.1 3084028 D 272560 CDS YP_109153.1 53720167 3092730 complement(3084928..3086073) 1 NC_006350.1 Similar to Bacillus halodurans DNA polymerase III PolC-type PolC or bh2418 SWALL:DPO3_BACHD (SWALL:Q9KA72) (1433 aa) fasta scores: E(): 1.1e-12, 35.54% id in 166 aa, and to Neisseria meningitidis DNA polymerase III, epsilon subunit nmb1451 SWALL:Q9JYS6 (EMBL:AE002495) (470 aa) fasta scores: E(): 2.2e-27, 42.35% id in 229 aa, and to Bacillus subtilis probable ATP-dependent helicase DinG homolog dinG SWALL:DING_BACSU (SWALL:P54394) (931 aa) fasta scores: E(): 7.6e-14, 38.79% id in 183 aa; DNA polymerase/helicase 3086073 3092730 BPSL2556 Burkholderia pseudomallei K96243 DNA polymerase/helicase YP_109153.1 3084928 R 272560 CDS YP_109154.1 53720168 3094214 complement(3086219..3086422) 1 NC_006350.1 Similar to Bordetella pertussis cold shock-like protein CspA SWALL:CSPA_BORPE (SWALL:Q9Z5R4) (67 aa) fasta scores: E(): 1.1e-16, 67.16% id in 67 aa, and to Burkholderia multivorans cold-shock protein CspD SWALL:Q8RL32 (EMBL:AY089707) (68 aa) fasta scores: E(): 4.3e-25, 95.45% id in 66 aa; cold shock-like protein 3086422 cspA 3094214 cspA Burkholderia pseudomallei K96243 cold shock-like protein YP_109154.1 3086219 R 272560 CDS YP_109155.1 53720169 3092647 3086825..3087088 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 3087088 3092647 BPSL2558 Burkholderia pseudomallei K96243 hypothetical protein YP_109155.1 3086825 D 272560 CDS YP_109156.1 53720170 3092648 3087604..3088743 1 NC_006350.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.5e-21, 34.94% id in 415 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 7e-58, 45.54% id in 393 aa; outer membrane porin 3088743 3092648 BPSL2559 Burkholderia pseudomallei K96243 outer membrane porin YP_109156.1 3087604 D 272560 CDS YP_109157.1 53720171 3094279 complement(3088971..3089534) 1 NC_006350.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 3089534 greB 3094279 greB Burkholderia pseudomallei K96243 transcription elongation factor GreB YP_109157.1 3088971 R 272560 CDS YP_109158.1 53720172 3093604 complement(3090073..3092442) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) SpoT or b3650 or z5076 or ecs4525 SWALL:SPOT_ECOLI (SWALL:P17580) (702 aa) fasta scores: E(): 6.7e-107, 45.63% id in 710 aa, and to Neisseria meningitidis guanosine-3',5'-bis SpoT or nma1917 SWALL:Q9JT97 (EMBL:AL162757) (725 aa) fasta scores: E(): 1.9e-118, 43.77% id in 731 aa; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 3092442 spoT 3093604 spoT Burkholderia pseudomallei K96243 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase YP_109158.1 3090073 R 272560 CDS YP_109159.1 53720173 3092978 complement(3092509..3092712) 1 NC_006350.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 3092712 rpoZ 3092978 rpoZ Burkholderia pseudomallei K96243 DNA-directed RNA polymerase subunit omega YP_109159.1 3092509 R 272560 CDS YP_109160.1 53720174 3092895 complement(3092773..3093456) 1 NC_006350.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3093456 gmk 3092895 gmk Burkholderia pseudomallei K96243 guanylate kinase YP_109160.1 3092773 R 272560 CDS YP_109161.1 53720175 3092715 complement(3093463..3094386) 1 NC_006350.1 Similar to many proteins of undefined function including: Ralstonia solanacearum hypothetical protein rsc2156 or rs01446 SWALL:Q8XXF8 (EMBL:AL646068) (311 aa) fasta scores: E(): 4.6e-64, 64.42% id in 312 aa, and to Haemophilus influenzae protein Hi0467 SWALL:YICC_HAEIN (SWALL:P44726) (287 aa) fasta scores: E(): 6.6e-13, 33.22% id in 307 aa; hypothetical protein 3094386 3092715 BPSL2564 Burkholderia pseudomallei K96243 hypothetical protein YP_109161.1 3093463 R 272560 CDS YP_109162.1 53720176 3094131 3094558..3095289 1 NC_006350.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3095289 rph 3094131 rph Burkholderia pseudomallei K96243 ribonuclease PH YP_109162.1 3094558 D 272560 CDS YP_109163.1 53720177 3092716 3095292..3095918 1 NC_006350.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 3095918 3092716 BPSL2566 Burkholderia pseudomallei K96243 deoxyribonucleotide triphosphate pyrophosphatase YP_109163.1 3095292 D 272560 CDS YP_109164.1 53720178 3092267 3095915..3097132 1 NC_006350.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3097132 3092267 BPSL2567 Burkholderia pseudomallei K96243 coproporphyrinogen III oxidase YP_109164.1 3095915 D 272560 CDS YP_109165.1 53720179 3092268 3097526..3098041 1 NC_006350.1 Weakly similar to Salmonella typhimurium LT2 gifsy-2 prophage lysozyme stm1028 SWALL:Q8ZQ99 (EMBL:AE008743) (150 aa) fasta scores: E(): 0.0078, 30.18% id in 159 aa; hypothetical protein 3098041 3092268 BPSL2568 Burkholderia pseudomallei K96243 hypothetical protein YP_109165.1 3097526 D 272560 CDS YP_109166.1 53720180 3094373 3098038..3098463 1 NC_006350.1 hypothetical protein 3098463 3094373 BPSL2569 Burkholderia pseudomallei K96243 hypothetical protein YP_109166.1 3098038 D 272560 CDS YP_109167.1 53720181 3094374 complement(3098811..3099368) 1 NC_006350.1 hypothetical protein 3099368 3094374 BPSL2570 Burkholderia pseudomallei K96243 hypothetical protein YP_109167.1 3098811 R 272560 CDS YP_109168.1 53720182 3092614 complement(3099365..3099673) 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 3099673 3092614 BPSL2571 Burkholderia pseudomallei K96243 hypothetical protein YP_109168.1 3099365 R 272560 CDS YP_109169.1 53720183 3092615 complement(3099670..3099987) 1 NC_006350.1 hypothetical protein 3099987 3092615 BPSL2572 Burkholderia pseudomallei K96243 hypothetical protein YP_109169.1 3099670 R 272560 CDS YP_109170.1 53720184 3092577 complement(3099960..3100235) 1 NC_006350.1 hypothetical protein 3100235 3092577 BPSL2573 Burkholderia pseudomallei K96243 hypothetical protein YP_109170.1 3099960 R 272560 CDS YP_109171.1 53720185 3092578 complement(3100232..3100567) 1 NC_006350.1 hypothetical protein 3100567 3092578 BPSL2574 Burkholderia pseudomallei K96243 hypothetical protein YP_109171.1 3100232 R 272560 CDS YP_109172.1 53720186 3092230 complement(3100568..3101269) 1 NC_006350.1 hypothetical protein 3101269 3092230 BPSL2575 Burkholderia pseudomallei K96243 hypothetical protein YP_109172.1 3100568 R 272560 CDS YP_109173.1 53720187 3092231 complement(3101269..3101904) 1 NC_006350.1 hypothetical protein 3101904 3092231 BPSL2576 Burkholderia pseudomallei K96243 hypothetical protein YP_109173.1 3101269 R 272560 CDS YP_109174.1 53720188 3092069 complement(3101933..3102235) 1 NC_006350.1 hypothetical protein 3102235 3092069 BPSL2577 Burkholderia pseudomallei K96243 hypothetical protein YP_109174.1 3101933 R 272560 CDS YP_109175.1 53720189 3092070 complement(3102329..3102535) 1 NC_006350.1 C-terminus is similar to the C-terminal region of Rhizobium loti hypothetical protein Msr8070 SWALL:Q984B8 (EMBL:AP003013) (87 aa) fasta scores: E(): 8.7, 34.88% id in 43 aa; hypothetical protein 3102535 3092070 BPSL2578 Burkholderia pseudomallei K96243 hypothetical protein YP_109175.1 3102329 R 272560 CDS YP_109176.1 53720190 3092057 complement(3102532..3103590) 1 NC_006350.1 Weakly similar to Lactococcus delbrueckii bacteriophage LL-H DnaA analog SWALL:Q8SDH3 (EMBL:L46883) (299 aa) fasta scores: E(): 9.6e-05, 24.9% id in 261 aa, and to Bacteriophage phi ETA orf22 SWALL:Q9G023 (EMBL:AP001553) (256 aa) fasta scores: E(): 0.00017, 22.77% id in 202 aa; hypothetical protein 3103590 3092057 BPSL2579 Burkholderia pseudomallei K96243 hypothetical protein YP_109176.1 3102532 R 272560 CDS YP_109177.1 53720191 3092058 complement(3103587..3103862) 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 3103862 3092058 BPSL2580 Burkholderia pseudomallei K96243 hypothetical protein YP_109177.1 3103587 R 272560 CDS YP_109178.1 53720192 3091657 complement(3103855..3104205) 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 3104205 3091657 BPSL2581 Burkholderia pseudomallei K96243 hypothetical protein YP_109178.1 3103855 R 272560 CDS YP_109179.1 53720193 3091658 complement(3104211..3104420) 1 NC_006350.1 Similar to Escherichia coli O157:H7 DNA binding protein z3946 or ecs3513 SWALL:Q8X969 (EMBL:AE005493) (68 aa) fasta scores: E(): 0.058, 29.5% id in 61 aa, and to Escherichia coli prophage cp4-57 regulatory protein alpa or alp or b2624 SWALL:ALPA_ECOLI (SWALL:P33997) (70 aa) fasta scores: E(): 0.28, 35.59% id in 59 aa; hypothetical protein 3104420 3091658 BPSL2582 Burkholderia pseudomallei K96243 hypothetical protein YP_109179.1 3104211 R 272560 CDS YP_109180.1 53720194 3091826 complement(3104506..3105051) 1 NC_006350.1 hypothetical protein 3105051 3091826 BPSL2583 Burkholderia pseudomallei K96243 hypothetical protein YP_109180.1 3104506 R 272560 CDS YP_109181.1 53720195 3091827 complement(3105139..3105351) 1 NC_006350.1 hypothetical protein 3105351 3091827 BPSL2584 Burkholderia pseudomallei K96243 hypothetical protein YP_109181.1 3105139 R 272560 CDS YP_109182.1 53720196 3092534 complement(3105344..3105631) 1 NC_006350.1 hypothetical protein 3105631 3092534 BPSL2585 Burkholderia pseudomallei K96243 hypothetical protein YP_109182.1 3105344 R 272560 CDS YP_109183.1 53720197 3092535 complement(3105703..3106971) 1 NC_006350.1 Similar to Ralstonia solanacearum integrase prophage protein rsc1896 or rs03460 SWALL:Q8XY67 (EMBL:AL646067) (411 aa) fasta scores: E(): 6.6e-91, 56.55% id in 412 aa, and to Agrobacterium tumefaciens phage-related integrase int or atu3831 or agr_l_2007 SWALL:Q8U997 (EMBL:AE009314) (396 aa) fasta scores: E(): 2.5e-74, 52.4% id in 395 aa; phage integrase 3106971 3092535 BPSL2586 Burkholderia pseudomallei K96243 phage integrase YP_109183.1 3105703 R 272560 CDS YP_109184.1 53720198 3094562 complement(3108136..3108714) 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 3108714 3094562 BPSL2588 Burkholderia pseudomallei K96243 hypothetical protein YP_109184.1 3108136 R 272560 CDS YP_109185.1 53720199 3091774 3108888..3109382 1 NC_006350.1 lipoprotein 3109382 3091774 BPSL2589 Burkholderia pseudomallei K96243 lipoprotein YP_109185.1 3108888 D 272560 CDS YP_109186.1 53720200 3091775 3109801..3111114 1 NC_006350.1 Similar to many MFS-family membrane transport proteins including: Escherichia coli shikimate transporter ShiA or b1981 SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 2.2e-46, 36.36% id in 440 aa, Ralstonia solanacearum metabolite transport transmembrane protein rsc2856 or rs00249 SWALL:Q8XVH5 (EMBL:AL646072) (439 aa) fasta scores: E(): 9.7e-135, 85.84% id in 438 aa and Pseudomonas aeruginosa probable MFS transporter pa3749 SWALL:Q9HXP5 (EMBL:AE004794) (437 aa) fasta scores: E(): 8.6e-119, 76.83% id in 436 aa; membrane transporter 3111114 3091775 BPSL2590 Burkholderia pseudomallei K96243 membrane transporter YP_109186.1 3109801 D 272560 CDS YP_109187.1 53720201 3091991 3111295..3111477 1 NC_006350.1 hypothetical protein 3111477 3091991 BPSL2591 Burkholderia pseudomallei K96243 hypothetical protein YP_109187.1 3111295 D 272560 CDS YP_109188.1 53720202 3093376 complement(3111512..3112534) 1 NC_006350.1 Similar to many proteins involved in LPS core biosynthesis: Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or rfa-2 or b3621 SWALL:RFAC_ECOLI (SWALL:P24173) (319 aa) fasta scores: E(): 9.2e-29, 36.54% id in 301 aa, Ralstonia solanacearum probable lipopolysaccharide heptosyltransferase RfaC2 or rsp0634 or rs03733 SWALL:Q8XS47 (EMBL:AL646079) (332 aa) fasta scores: E(): 1.5e-85, 69.41% id in 327 aa and to Burkholderia cepacia heptosyltransferase I WaaC SWALL:Q937V3 (EMBL:AJ302064) (331 aa) fasta scores: E(): 1.3e-31, 37% id in 327 aa; lipopolysaccharide heptosyltransferase-1 3112534 waaC2 3093376 waaC2 Burkholderia pseudomallei K96243 lipopolysaccharide heptosyltransferase-1 YP_109188.1 3111512 R 272560 CDS YP_109189.1 53720203 3091992 3112696..3114357 1 NC_006350.1 Similar to Salmonella typhi voltage-gated Clc-type chloride channel EriC or sty0225 SWALL:ERIC_SALTI (SWALL:Q8Z9B3) (473 aa) fasta scores: E(): 3.1e-19, 29.93% id in 471 aa, and to Burkholderia cepacia chloride-channel protein SWALL:Q93L19 (EMBL:AF029344) (443 aa) fasta scores: E(): 5e-51, 44.86% id in 428 aa, and to Xanthomonas campestris chloride channel yadq or xcc2655 SWALL:AAM41927 (EMBL:AE012377) (454 aa) fasta scores: E(): 3.3e-48, 41.44% id in 444 aa; chloride-channel protein 3114357 3091992 BPSL2593 Burkholderia pseudomallei K96243 chloride-channel protein YP_109189.1 3112696 D 272560 CDS YP_109190.1 53720204 3092560 complement(3114474..3114893) 1 NC_006350.1 hypothetical protein 3114893 3092560 BPSL2594 Burkholderia pseudomallei K96243 hypothetical protein YP_109190.1 3114474 R 272560 CDS YP_109191.1 53720205 3093063 complement(3115015..3115269) 1 NC_006350.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 3115269 minE 3093063 minE Burkholderia pseudomallei K96243 cell division topological specificity factor MinE YP_109191.1 3115015 R 272560 CDS YP_109192.1 53720206 3093025 complement(3115282..3116097) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 septum site-determining protein MinD or b1175 or z1937 or ecs1669 SWALL:MIND_ECOLI (SWALL:P18197) (269 aa) fasta scores: E(): 1.6e-74, 74.34% id in 269 aa and to Ralstonia solanacearum probable septum site-determining protein MinD or rsc3365 or rs02640 SWALL:Q8XU29 (EMBL:AL646075) (271 aa) fasta scores: E(): 5e-87, 84.5% id in 271 aa; septum site-determining protein 3116097 minD 3093025 minD Burkholderia pseudomallei K96243 septum site-determining protein YP_109192.1 3115282 R 272560 CDS YP_109193.1 53720207 3093128 complement(3116156..3116968) 1 NC_006350.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 3116968 minC 3093128 minC Burkholderia pseudomallei K96243 septum formation inhibitor YP_109193.1 3116156 R 272560 CDS YP_109194.1 53720208 3092561 complement(3117122..3117694) 1 NC_006350.1 acetyltransferase 3117694 3092561 BPSL2598 Burkholderia pseudomallei K96243 acetyltransferase YP_109194.1 3117122 R 272560 CDS YP_109195.1 53720209 3093414 3118611..3118883 1 NC_006350.1 hypothetical protein 3118883 3093414 BPSL2599 Burkholderia pseudomallei K96243 hypothetical protein YP_109195.1 3118611 D 272560 CDS YP_109196.1 53720210 3094242 complement(3119313..3120614) 1 NC_006350.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 3120614 serS 3094242 serS Burkholderia pseudomallei K96243 seryl-tRNA synthetase YP_109196.1 3119313 R 272560 CDS YP_109197.1 53720211 3093415 3120727..3121038 1 NC_006350.1 hypothetical protein 3121038 3093415 BPSL2601 Burkholderia pseudomallei K96243 hypothetical protein YP_109197.1 3120727 D 272560 CDS YP_109198.1 53720212 3092564 complement(3121078..3122445) 1 NC_006350.1 Similar to many proteins of undefined function including: Ralstonia solanacearum hypothetical protein rsc2338 or rs01208 SWALL:Q8XWY2 (EMBL:AL646069) blast scores: E(): e-171, score: 1537 72% id, and to Neisseria meningitidis hypothetical protein Nma1433 SWALL:Q9JU96 (EMBL:AL162755) blast scores: E(): e-170, score: 1529 68% id; recombination factor protein RarA 3122445 3092564 BPSL2602 Burkholderia pseudomallei K96243 recombination factor protein RarA YP_109198.1 3121078 R 272560 CDS YP_109199.1 53720213 3092565 complement(3122575..3123291) 1 NC_006350.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 3123291 lolA 3092565 lolA Burkholderia pseudomallei K96243 outer-membrane lipoprotein carrier protein YP_109199.1 3122575 R 272560 CDS YP_109200.1 53720214 3091542 complement(3123349..3125817) 1 NC_006350.1 Similar to many involved in cell-division or sporulation: Coxiella burnetii cell division protein FtsK homolog or spoIIIE SWALL:FTSK_COXBU (SWALL:P39920) (778 aa) fasta scores: E(): 5.2e-130, 50.06% id in 765 aa, and to Ralstonia solanacearum probable cell division FtsK transmembrane protein or rsc2341 or rs01205 SWALL:Q8XWX9 (EMBL:AL646069) (781 aa) fasta scores: E(): 4.3e-202, 71.02% id in 780 aa; cell division protein 3125817 3091542 BPSL2604 Burkholderia pseudomallei K96243 cell division protein YP_109200.1 3123349 R 272560 CDS YP_109201.1 53720215 3092744 3125983..3126945 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 thioredoxin reductase TrxB or b0888 or z1232 or ecs0973 SWALL:TRXB_ECOLI (SWALL:P09625) (320 aa) fasta scores: E(): 4.2e-82, 67.39% id in 319 aa, and to Vibrio cholerae thioredoxin reductase TrxB or vc1182 SWALL:TRXB_VIBCH (SWALL:Q9KSS4) (318 aa) fasta scores: E(): 4.3e-85, 69.52% id in 315 aa; thioredoxin reductase 3126945 trxB 3092744 trxB Burkholderia pseudomallei K96243 thioredoxin reductase YP_109201.1 3125983 D 272560 CDS YP_109202.1 53720216 3091543 3127111..3127848 1 NC_006350.1 Similar in parts to severalm proteins of undefined function including: Ralstonia solanacearum hypothetical protein rsc2343 or rs01203 SWALL:Q8XWX7 (EMBL:AL646069) (221 aa) fasta scores: E(): 1.9e-34, 56.94% id in 216 aa and Xanthomonas campestris hypothetical protein Xcc1705 SWALL:AAM40999 (EMBL:AE012272) (181 aa) fasta scores: E(): 3.1e-10, 36.84% id in 171 aa; hypothetical protein 3127848 3091543 BPSL2606 Burkholderia pseudomallei K96243 hypothetical protein YP_109202.1 3127111 D 272560 CDS YP_109203.1 53720217 3092682 3127874..3128494 1 NC_006350.1 Similar to many membrane proteins including Salmonella typhimurium inner membrane protein Yigc or stm3978 or stm3738 SWALL:Q8ZL43 (EMBL:AE008873) (205 aa) fasta scores: E(): 3.5e-20, 37.18% id in 199 aa and to Ralstonia solanacearum probable transmembrane protein rsc2344 or rs01202 SWALL:Q8XWX6 (EMBL:AL646069) (207 aa) fasta scores: E(): 1.3e-42, 53.88% id in 206 aa; hypothetical protein 3128494 3092682 BPSL2607 Burkholderia pseudomallei K96243 hypothetical protein YP_109203.1 3127874 D 272560 CDS YP_109204.1 53720218 3092683 complement(3128727..3129845) 1 NC_006350.1 Similar to Rhizobium loti ATP-binding component of ABC sugar transporter mlr3054 SWALL:Q98H30 (EMBL:AP003001) (371 aa) fasta scores: E(): 4.4e-70, 55.49% id in 373 aa and to Rhizobium loti ABC transporter ATP-binding component mlr6654 SWALL:Q988P3 (EMBL:AP003009) (366 aa) fasta scores: E(): 2.8e-69, 56.95% id in 374 aa. See BPSL261 as a possible indictation as to the substrate of this transport system.; ABC transporter ATP-binding protein 3129845 3092683 BPSL2608 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_109204.1 3128727 R 272560 CDS YP_109205.1 53720219 3092594 complement(3129946..3130803) 1 NC_006350.1 Similar to many ABC-transport proteins including: Brucella melitensis sugar transport system permease bmeii0592 SWALL:Q8YCE0 (EMBL:AE009695) (293 aa) fasta scores: E(): 8.9e-75, 64.15% id in 279 aa, and to Rhizobium loti ABC transporter permease mlr6653 SWALL:Q988P4 (EMBL:AP003009) (292 aa) fasta scores: E(): 4.5e-70, 59.14% id in 279 aa. See BPSL261 as a possible indictation as to the substrate of this transport system.; ABC transporter membrane permease 3130803 3092594 BPSL2609 Burkholderia pseudomallei K96243 ABC transporter membrane permease YP_109205.1 3129946 R 272560 CDS YP_109206.1 53720220 3092595 complement(3130793..3131731) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable permease of ABC sugar transporter Pa3189 SWALL:Q9HZ49 (EMBL:AE004742) (310 aa) fasta scores: E(): 4e-77, 60.92% id in 302 aa, and to Rhizobium meliloti transport system permease ABC transporter protein r03300 or smc04395 SWALL:Q92KZ8 (EMBL:AL591793) (292 aa) fasta scores: E(): 6e-73, 60.49% id in 281 aa. See BPSL261 as a possible indictation as to the substrate of this transport system.; ABC transporter membrane permease 3131731 3092595 BPSL2610 Burkholderia pseudomallei K96243 ABC transporter membrane permease YP_109206.1 3130793 R 272560 CDS YP_109207.1 53720221 3093125 complement(3131888..3133135) 1 NC_006350.1 Highly similar to Burkholderia pseudomallei maltose-binding protein MalE SWALL:Q9F7V0 (EMBL:AF274304) (416 aa) fasta scores: E(): 5.6e-161, 99.76% id in 416 aa. Also similar to many other ABC transporter solute-binding proteins e.g. Rhizobium loti ABC transporter substrate-binding protein mlr6651 SWALL:Q988P6 (EMBL:AP003009) (419 aa) fasta scores: E(): 2.3e-59, 41.7% id in 398 aa; maltose-binding protein 3133135 malE 3093125 malE Burkholderia pseudomallei K96243 maltose-binding protein YP_109207.1 3131888 R 272560 CDS YP_109208.1 53720222 3094730 3133594..3135063 1 NC_006350.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3135063 zwf 3094730 zwf Burkholderia pseudomallei K96243 glucose-6-phosphate 1-dehydrogenase YP_109208.1 3133594 D 272560 CDS YP_109209.1 53720223 3094109 3135151..3135831 1 NC_006350.1 Similar to Pseudomonas aeruginosa 6-phosphogluconolactonase Pgl or DevB or pa3182 SWALL:6PGL_PSEAE (SWALL:Q9X2N2) (238 aa) fasta scores: E(): 4e-21, 41.66% id in 216 aa, and to Rhizobium meliloti 6-phosphogluconolactonase Pgl or DevB or r00703 or smc03069 SWALL:6PGL_RHIME (SWALL:Q9Z3S1) (232 aa) fasta scores: E(): 5e-25, 40.96% id in 227 aa; 6-phosphogluconolactonase 3135831 pgl 3094109 pgl Burkholderia pseudomallei K96243 6-phosphogluconolactonase YP_109209.1 3135151 D 272560 CDS YP_109210.1 53720224 3091975 3135809..3137734 1 NC_006350.1 glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; bifunctional glucokinase/RpiR family transcriptional regulator 3137734 glk 3091975 glk Burkholderia pseudomallei K96243 bifunctional glucokinase/RpiR family transcriptional regulator YP_109210.1 3135809 D 272560 CDS YP_109211.1 53720225 3093954 3138237..3139037 1 NC_006350.1 Similar to many membrane transport proteins including: Escherichia coli cystine-binding periplasmic protein precursor FliY or b1920 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 4.2e-31, 40.23% id in 251 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa0314 SWALL:Q9I6H7 (EMBL:AE004469) (256 aa) fasta scores: E(): 1e-47, 53.22% id in 248 aa, and to Deinococcus radiodurans amino acid ABC transporter periplasmic amino acid-binding protein dr0564 SWALL:Q9RWV1 (EMBL:AE001914) (261 aa) fasta scores: E(): 1.5e-39, 47.69% id in 260 aa; ABC transporter substrate binding component 3139037 3093954 BPSL2615 Burkholderia pseudomallei K96243 ABC transporter substrate binding component YP_109211.1 3138237 D 272560 CDS YP_109212.1 53720226 3093955 3139123..3139782 1 NC_006350.1 Similar to Salmonella typhimurium, and Salmonella typhi ABC-type amino acid transporter permease component YecS or stm1952 or sty2160 SWALL:Q8XET2 (EMBL:AE008786) (222 aa) fasta scores: E(): 3.7e-34, 45.49% id in 211 aa, and to Caulobacter crescentus cystine ABC tranporter, permease, cc1440 SWALL:Q9A8B4 (EMBL:AE005818) (219 aa) fasta scores: E(): 6.6e-34, 48.81% id in 211 aa; amino acid ABC transporter permease 3139782 3093955 BPSL2616 Burkholderia pseudomallei K96243 amino acid ABC transporter permease YP_109212.1 3139123 D 272560 CDS YP_109213.1 53720227 3094121 3139829..3140554 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 glutamate/aspartate transport ATP-binding protein GltL or b0652 or z0802 or ecs0691 SWALL:GLTL_ECOLI (SWALL:P41076) (241 aa) fasta scores: E(): 8.5e-62, 75.93% id in 241 aa, and to Salmonella typhimurium, and Salmonella typhi ABC superfamily GltL or stm0662 or sty0707 SWALL:Q8XG42 (EMBL:AE008726) (241 aa) fasta scores: E(): 5.8e-62, 76.34% id in 241 aa; amino acid ABC transporter ATP-binding protein 3140554 3094121 BPSL2617 Burkholderia pseudomallei K96243 amino acid ABC transporter ATP-binding protein YP_109213.1 3139829 D 272560 CDS YP_109214.1 53720228 3094122 3140625..3141644 1 NC_006350.1 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 3141644 3094122 BPSL2618 Burkholderia pseudomallei K96243 D-cysteine desulfhydrase YP_109214.1 3140625 D 272560 CDS YP_109215.1 53720229 3093938 3141641..3142108 1 NC_006350.1 Weakly similar to Xanthomonas axonopodis hypothetical protein Xac4063 SWALL:Q8PFC0 (EMBL:AE012054) (154 aa) fasta scores: E(): 9.1e-10, 40.29% id in 134 aa; hypothetical protein 3142108 3093938 BPSL2619 Burkholderia pseudomallei K96243 hypothetical protein YP_109215.1 3141641 D 272560 CDS YP_109216.1 53720230 3093939 complement(3142218..3143453) 1 NC_006350.1 Similar to Salmonella typhimurium MFS family multidrug transport protein, bicyclomycin resistance protein Bcr or stm2221 SWALL:Q8ZNJ7 (EMBL:AE008799) (396 aa) fasta scores: E(): 6.2e-44, 34.5% id in 397 aa and to Escherichia coli bicyclomycin resistance protein Bcr or bica or bicr or sur or suxa or b2182 SWALL:BCR_ECOLI (SWALL:P28246) (396 aa) fasta scores: E(): 2e-43, 33.93% id in 386 aa; major facilitator transporter 3143453 3093939 BPSL2620 Burkholderia pseudomallei K96243 major facilitator transporter YP_109216.1 3142218 R 272560 CDS YP_109217.1 53720231 3094773 3143540..3144160 1 NC_006350.1 hypothetical protein 3144160 3094773 BPSL2621 Burkholderia pseudomallei K96243 hypothetical protein YP_109217.1 3143540 D 272560 CDS YP_109218.1 53720232 3094774 3144260..3144718 1 NC_006350.1 hypothetical protein 3144718 3094774 BPSL2622 Burkholderia pseudomallei K96243 hypothetical protein YP_109218.1 3144260 D 272560 CDS YP_109219.1 53720233 3091548 3145160..3146443 1 NC_006350.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 3146443 hemL 3091548 hemL Burkholderia pseudomallei K96243 glutamate-1-semialdehyde aminotransferase YP_109219.1 3145160 D 272560 CDS YP_109220.1 53720234 3092948 3146472..3147608 1 NC_006350.1 Similar to Haemophilus influenzae riboflavin biosynthesis protein ribd [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase ribd or ribg or hi0944 SWALL:RIBD_HAEIN (SWALL:P44326) (372 aa) fasta scores: E(): 4.5e-54, 47.73% id in 375 aa, and to Ralstonia solanacearum probable riboflavin biosynthesis bifunctional ribd : diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6- ribd or rsc0715 or rs05138 SWALL:Q8Y1H5 (EMBL:AL646060) (370 aa) fasta scores: E(): 6.7e-94, 67.48% id in 369 aa; multifunctional riboflavin biosynthetic protein [deaminase, reductase 3147608 ribD 3092948 ribD Burkholderia pseudomallei K96243 multifunctional riboflavin biosynthetic protein [deaminase, reductase YP_109220.1 3146472 D 272560 CDS YP_109221.1 53720235 3091866 3147623..3148237 1 NC_006350.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3148237 ribE 3091866 ribE Burkholderia pseudomallei K96243 riboflavin synthase subunit alpha YP_109221.1 3147623 D 272560 CDS YP_109222.1 53720236 3092773 3148701..3149837 1 NC_006350.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 3149837 ribB 3092773 ribB Burkholderia pseudomallei K96243 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein YP_109222.1 3148701 D 272560 CDS YP_109223.1 53720237 3091867 3149917..3150438 1 NC_006350.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3150438 ribH 3091867 ribH Burkholderia pseudomallei K96243 6,7-dimethyl-8-ribityllumazine synthase YP_109223.1 3149917 D 272560 CDS YP_109224.1 53720238 3092073 3150435..3150872 1 NC_006350.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3150872 nusB 3092073 nusB Burkholderia pseudomallei K96243 transcription antitermination protein NusB YP_109224.1 3150435 D 272560 CDS YP_109225.1 53720239 3094017 3150880..3152130 1 NC_006350.1 Similar to many aminotransferases including: Ralstonia solanacearum aminotransferase rsc0710 or rs05143 SWALL:Q8Y1I0 (EMBL:AL646060) (394 aa) fasta scores: E(): 3.3e-108, 73.52% id in 389 aa and to Thermus thermophilus aspartate aminotransferase AspC SWALL:AAT_THETH (SWALL:Q56232) (385 aa) fasta scores: E(): 2.7e-36, 35.53% id in 394 aa; aminotransferase 3152130 3094017 BPSL2629 Burkholderia pseudomallei K96243 aminotransferase YP_109225.1 3150880 D 272560 CDS YP_109226.1 53720240 3094018 complement(3152745..3153812) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0709 or rs05144 SWALL:Q8Y1I1 (EMBL:AL646060) (362 aa) fasta scores: E(): 7.5e-43, 48.54% id in 344 aa; lipoprotein 3153812 3094018 BPSL2630 Burkholderia pseudomallei K96243 lipoprotein YP_109226.1 3152745 R 272560 CDS YP_109227.1 53720241 3094696 3154437..3155996 1 NC_006350.1 highly similar to Neisseria meningitidis 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD or nmb1694 SWALL:UBID_NEIMB (SWALL:Q9JY86) (494 aa) fasta scores: E(): 7.1e-67, 72.65% id in 523 aa and to Salmonella typhimurium 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ubid or stm3978 or stmd1.11 SWALL:UBID_SALTY (SWALL:Q9L6M0) (492 aa) fasta scores: E(): 6.1e-64, 67.95% id in 518 aa; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3155996 ubiD 3094696 ubiD Burkholderia pseudomallei K96243 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_109227.1 3154437 D 272560 CDS YP_109228.1 53720242 3094460 3156037..3156711 1 NC_006350.1 Weakly similar to Pseudomonas aeruginosa chemotactic transduction protein ChpE or pa0417 SWALL:CHPE_PSEAE (SWALL:O87005) (203 aa) fasta scores: E(): 6.2e-09, 28.57% id in 203 aa, and to Bacillus subtilis hypothetical protein YcgF SWALL:P94381 (EMBL:Z99105) (209 aa) fasta scores: E(): 2.4e-08, 25.72% id in 206 aa; hypothetical protein 3156711 3094460 BPSL2632 Burkholderia pseudomallei K96243 hypothetical protein YP_109228.1 3156037 D 272560 CDS YP_109229.1 53720243 3094461 complement(3157166..3158149) 1 NC_006350.1 catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase 3158149 3094461 BPSL2633 Burkholderia pseudomallei K96243 serine/threonine dehydratase YP_109229.1 3157166 R 272560 CDS YP_109230.1 53720244 3094201 complement(3158311..3158604) 1 NC_006350.1 Similar to the Bordetella pertussis virulence related protein of unknown function Vrg-6 SWALL:Q45395 (EMBL:M77374) (105 aa) fasta scores: E(): 3.2e-07, 47.22% id in 108 aa. Also similar to and to Ralstonia solanacearum probable transmembrane protein rsc1969 or rs03543 SWALL:Q8XXZ4 (EMBL:AL646067) (106 aa) fasta scores: E(): 1.1e-11, 59.59% id in 99 aa. Note that the product of this CDS is rich in the amino acids Pro, Ala, Val , Tyr and Gly; hypothetical protein 3158604 3094201 BPSL2634 Burkholderia pseudomallei K96243 hypothetical protein YP_109230.1 3158311 R 272560 CDS YP_109231.1 53720245 3094202 3159029..3160165 1 NC_006350.1 Weakly similar to Ralstonia solanacearum hypothetical protein rsp0668 or rs01781 SWALL:Q8XS13 (EMBL:AL646080) (294 aa) fasta scores: E(): 6.7e-34, 47.4% id in 289 aa and to Streptomyces coelicolor hypothetical protein sco3384 or sce126.02C SWALL:Q9X845 (EMBL:AL049630) (420 aa) fasta scores: E(): 9.1e-15, 31.34% id in 319 aa; hypothetical protein 3160165 3094202 BPSL2635 Burkholderia pseudomallei K96243 hypothetical protein YP_109231.1 3159029 D 272560 CDS YP_109232.1 53720246 3094511 3160248..3160811 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1385 or rs02073 SWALL:Q8XQA1 (EMBL:AL646084) (183 aa) fasta scores: E(): 9.1e-35, 51.12% id in 178 aa and to Vibrio cholerae hypothetical protein Vc0459 SWALL:Q9KUQ6 (EMBL:AE004132) (185 aa) fasta scores: E(): 3.6e-21, 39.87% id in 163 aa; hypothetical protein 3160811 3094511 BPSL2636 Burkholderia pseudomallei K96243 hypothetical protein YP_109232.1 3160248 D 272560 CDS YP_109233.1 53720247 3094512 complement(3160835..3161191) 1 NC_006350.1 Similar to Aquifex aeolicus hypothetical protein Aq_450 SWALL:Y450_AQUAE (SWALL:O66758) (105 aa) fasta scores: E(): 3e-07, 33.75% id in 80 aa and to Chlorobium tepidum hypothetical protein Ct2101 SWALL:AAM73317 (EMBL:AE012959) (110 aa) fasta scores: E(): 3.4e-06, 37.2% id in 86 aa; hypothetical protein 3161191 3094512 BPSL2637 Burkholderia pseudomallei K96243 hypothetical protein YP_109233.1 3160835 R 272560 CDS YP_109234.1 53720248 3094255 complement(3161215..3161601) 1 NC_006350.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3161601 3094255 BPSL2638 Burkholderia pseudomallei K96243 camphor resistance protein CrcB YP_109234.1 3161215 R 272560 CDS YP_008992011.1 568335730 18093826 3161617..3161865 1 NC_006350.1 omega-amino acid: pyruvate aminotransferase; hypothetical protein 3161865 18093826 BPSL2638b Burkholderia pseudomallei K96243 hypothetical protein YP_008992011.1 3161617 D 272560 CDS YP_109235.1 53720249 3094256 3162211..3163431 1 NC_006350.1 Similar to several including: Physarum polycephalum PhP protein Php SWALL:Q94704 (EMBL:X64708) (356 aa) fasta scores: E(): 4.7e-26, 37.32% id in 351 aa and to Xanthomonas sp. xanthomonapepsin precursor SWALL:XANP_XANS2 (SWALL:Q60106) (827 aa) fasta scores: E(): 1.3e-05, 27.86% id in 402 aa; hypothetical protein 3163431 3094256 BPSL2639 Burkholderia pseudomallei K96243 hypothetical protein YP_109235.1 3162211 D 272560 CDS YP_109236.1 53720250 3093518 complement(3163699..3164427) 1 NC_006350.1 Similar to many including: Stigmatella aurantiaca methyl transferase SWALL:Q8RJZ2 (EMBL:AJ421825) (242 aa) fasta scores: E(): 1.9e-61, 61.57% id in 242 aa, Rhizobium loti hypothetical protein Mll3908 SWALL:Q98F67 (EMBL:AP003003) (242 aa) fasta scores: E(): 2.6e-60, 61.98% id in 242 aa and to Brucella melitensis ubiquinone/menaquinone biosynthesis methyltransferase UbiE bmei1834 SWALL:Q8YEP4 (EMBL:AE009616) (262 aa) fasta scores: E(): 4.7e-57, 60.41% id in 240 aa; hypothetical protein 3164427 3093518 BPSL2640 Burkholderia pseudomallei K96243 hypothetical protein YP_109236.1 3163699 R 272560 CDS YP_109237.1 53720251 3093519 complement(3164671..3165921) 1 NC_006350.1 Weakly similar to many Prokaryotic and Eukaryotic proteins: Homo sapiens hypothetical protein flj20348 SWALL:Q9NXA8 (EMBL:AK000355) (299 aa) fasta scores: E(): 1.1e-09, 30% id in 190 aa, Pseudomonas aeruginosa probable cobalamin biosynthetic protein pa1125 SWALL:Q9I4L0 (EMBL:AE004542) (250 aa) fasta scores: E(): 3.2e-08, 31.83% id in 267 aa and to Leishmania major regulatory protein Sir2 homolog SWALL:SIR2_LEIMA (SWALL:Q25337) (381 aa) fasta scores: E(): 1.8e-07, 25.49% id in 302 aa; Sir2 family protein 3165921 3093519 BPSL2641 Burkholderia pseudomallei K96243 Sir2 family protein YP_109237.1 3164671 R 272560 CDS YP_109238.1 53720252 3093291 3166316..3167113 1 NC_006350.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3167113 trmB 3093291 trmB Burkholderia pseudomallei K96243 tRNA (guanine-N(7)-)-methyltransferase YP_109238.1 3166316 D 272560 CDS YP_109239.1 53720253 3093292 complement(3167269..3168099) 1 NC_006350.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 3168099 uppP 3093292 uppP Burkholderia pseudomallei K96243 undecaprenyl pyrophosphate phosphatase YP_109239.1 3167269 R 272560 CDS YP_109240.1 53720254 3094465 complement(3168176..3168757) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0700 or rs01605 SWALL:Q8Y1J0 (EMBL:AL646060) (204 aa) fasta scores: E(): 1.3e-26, 46.39% id in 194 aa; hypothetical protein 3168757 3094465 BPSL2644 Burkholderia pseudomallei K96243 hypothetical protein YP_109240.1 3168176 R 272560 CDS YP_109241.1 53720255 3094466 complement(3168754..3169065) 1 NC_006350.1 Similar to Xanthomonas axonopodis proteinase inhibitor xac0347 SWALL:AAM35239 (EMBL:AE011660) (86 aa) fasta scores: E(): 2e-18, 71.08% id in 83 aa, and to Escherichia coli hypothetical protein YeiW or b2170.1 SWALL:YEIW_ECOLI (SWALL:P58039) (84 aa) fasta scores: E(): 2.9e-17, 63.41% id in 82 aa; hypothetical protein 3169065 3094466 BPSL2645 Burkholderia pseudomallei K96243 hypothetical protein YP_109241.1 3168754 R 272560 CDS YP_109242.1 53720256 3091549 3169253..3170647 1 NC_006350.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3170647 hemN 3091549 hemN Burkholderia pseudomallei K96243 coproporphyrinogen III oxidase YP_109242.1 3169253 D 272560 CDS YP_109243.1 53720257 3092271 3170681..3170986 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 3170986 3092271 BPSL2647 Burkholderia pseudomallei K96243 hypothetical protein YP_109243.1 3170681 D 272560 CDS YP_109244.1 53720258 3093624 3171093..3171746 1 NC_006350.1 Similar to Aeropyrum pernix protein-L-isoaspartate O-methyltransferase Pcm or ape1011 SWALL:PIMT_AERPE (SWALL:Q9YDA1) (256 aa) fasta scores: E(): 2e-20, 42.26% id in 194 aa and to Ralstonia solanacearum probable protein-L-isoaspartate O-methyltransferase Pcm or rsc0697 or rs01602 SWALL:Q8Y1J3 (EMBL:AL646060) (216 aa) fasta scores: E(): 3.1e-52, 65.43% id in 217 aa; protein-L-isoaspartate O-methyltransferase 3171746 pcm 3093624 pcm Burkholderia pseudomallei K96243 protein-L-isoaspartate O-methyltransferase YP_109244.1 3171093 D 272560 CDS YP_109245.1 53720259 3092272 3171761..3172084 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0696 or rs01601 SWALL:Q8Y1J4 (EMBL:AL646060) (110 aa) fasta scores: E(): 1.6e-20, 53.63% id in 110 aa and to Neisseria meningitidis hypothetical protein Nma0573 SWALL:Q9JW28 (EMBL:AL162753) (107 aa) fasta scores: E(): 4.6e-14, 45.19% id in 104 aa; hypothetical protein 3172084 3092272 BPSL2649 Burkholderia pseudomallei K96243 hypothetical protein YP_109245.1 3171761 D 272560 CDS YP_109246.1 53720260 3094317 complement(3172177..3173505) 1 NC_006350.1 catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; omega amino acid--pyruvate transaminase 3173505 3094317 BPSL2650 Burkholderia pseudomallei K96243 omega amino acid--pyruvate transaminase YP_109246.1 3172177 R 272560 CDS YP_109247.1 53720261 3094318 3173859..3175166 1 NC_006350.1 Similar to Ralstonia solanacearum urea/short-chain amide-binding signal peptide protein rsc2041 or rs03606 SWALL:Q8XXS2 (EMBL:AL646067) (418 aa) fasta scores: E(): 7.9e-133, 82.61% id in 420 aa and to Yersinia pestis substrate-binding periplasmic transport protein ypo1187 SWALL:Q8ZGU0 (EMBL:AJ414147) (422 aa) fasta scores: E(): 8.5e-121, 76.42% id in 420 aa; hypothetical protein 3175166 3094318 BPSL2651 Burkholderia pseudomallei K96243 hypothetical protein YP_109247.1 3173859 D 272560 CDS YP_109248.1 53720262 3092033 3175261..3176883 1 NC_006350.1 Similar to Yersinia pestis branched-chain amino acid transport system, permease component ypo1188 SWALL:Q8ZGT9 (EMBL:AJ414147) (533 aa) fasta scores: E(): 1.3e-79, 50.48% id in 515 aa and to Ralstonia solanacearum probable permease transporter transmembrane protein rsc2040 or rs03605 SWALL:Q8XXS3 (EMBL:AL646067) (538 aa) fasta scores: E(): 3.8e-109, 64.2% id in 542 aa; branched-chain amino acid transport system permease 3176883 3092033 BPSL2652 Burkholderia pseudomallei K96243 branched-chain amino acid transport system permease YP_109248.1 3175261 D 272560 CDS YP_109249.1 53720263 3092034 3176885..3178087 1 NC_006350.1 Similar to Yersinia pestis branched-chain amino acid transport system, permease component ypo1189 SWALL:Q8ZGT8 (EMBL:AJ414147) (358 aa) fasta scores: E(): 2.4e-77, 62.17% id in 341 aa, and to Ralstonia solanacearum probable permease transporter transmembrane protein rsc2039 or rs03604 SWALL:Q8XXS4 (EMBL:AL646067) (396 aa) fasta scores: E(): 1.1e-100, 74.86% id in 362 aa; branched-chain amino acid transport system permease 3178087 3092034 BPSL2653 Burkholderia pseudomallei K96243 branched-chain amino acid transport system permease YP_109249.1 3176885 D 272560 CDS YP_109250.1 53720264 3093568 3178084..3178947 1 NC_006350.1 Similar to Yersinia pestis ABC transport ATP-binding subunit ypo1190 SWALL:Q8ZGT7 (EMBL:AJ414147) (278 aa) fasta scores: E(): 8.5e-43, 61.22% id in 245 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2038 or rs03603 SWALL:Q8XXS5 (EMBL:AL646067) (287 aa) fasta scores: E(): 2e-63, 72.69% id in 282 aa; ABC transport ATP-binding subunit 3178947 3093568 BPSL2654 Burkholderia pseudomallei K96243 ABC transport ATP-binding subunit YP_109250.1 3178084 D 272560 CDS YP_109251.1 53720265 3093569 3178952..3179644 1 NC_006350.1 Similar to Yersinia pestis ABC transport ATP-binding subunit ypo1191 SWALL:Q8ZGT6 (EMBL:AJ414147) (232 aa) fasta scores: E(): 1.6e-45, 60.94% id in 233 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2037 or rs03602 SWALL:Q8XXS6 (EMBL:AL646067) (230 aa) fasta scores: E(): 1.1e-56, 74.34% id in 230 aa; ABC transport ATP-binding subunit 3179644 3093569 BPSL2655 Burkholderia pseudomallei K96243 ABC transport ATP-binding subunit YP_109251.1 3178952 D 272560 CDS YP_109252.1 53720266 3092926 3179763..3180761 1 NC_006350.1 Similar to Alcaligenes eutrophus urease accessory protein UreD1 SWALL:URD1_ALCEU (SWALL:O30332) (289 aa) fasta scores: E(): 1.3e-53, 54% id in 287 aa, and to Ralstonia solanacearum probable urease accessory protein UreD or rsc2036 or rs03030 SWALL:Q8XXS7 (EMBL:AL646067) (295 aa) fasta scores: E(): 1.6e-54, 53.87% id in 284 aa; UreD-family accessory protein 3180761 UreD 3092926 UreD Burkholderia pseudomallei K96243 UreD-family accessory protein YP_109252.1 3179763 D 272560 CDS YP_109253.1 53720267 3093579 3180983..3181285 1 NC_006350.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 3181285 ureA 3093579 ureA Burkholderia pseudomallei K96243 urease subunit gamma YP_109253.1 3180983 D 272560 CDS YP_109254.1 53720268 3093580 3181375..3181680 1 NC_006350.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 3181680 ureB 3093580 ureB Burkholderia pseudomallei K96243 urease subunit beta YP_109254.1 3181375 D 272560 CDS YP_109255.1 53720269 3092913 3181745..3183451 1 NC_006350.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 3183451 ureC 3092913 ureC Burkholderia pseudomallei K96243 urease subunit alpha YP_109255.1 3181745 D 272560 CDS YP_109256.1 53720270 3092927 3183469..3184086 1 NC_006350.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 3184086 ureE 3092927 ureE Burkholderia pseudomallei K96243 urease accessory protein UreE YP_109256.1 3183469 D 272560 CDS YP_109257.1 53720271 3093271 3184073..3184753 1 NC_006350.1 Similar to Klebsiella aerogenes urease accessory protein UreF SWALL:UREF_KLEAE (SWALL:P18318) (224 aa) fasta scores: E(): 1.5e-15, 33.04% id in 233 aa, and to Ralstonia solanacearum probable urease accessory protein UreF or rsc2030 or rs03600 SWALL:Q8XXT3 (EMBL:AL646067) (229 aa) fasta scores: E(): 1.5e-40, 55.94% id in 227 aa; urease accessory protein 3184753 ureF 3093271 ureF Burkholderia pseudomallei K96243 urease accessory protein YP_109257.1 3184073 D 272560 CDS YP_109258.1 53720272 3093272 3184784..3185434 1 NC_006350.1 Similar to Bordetella bronchiseptica urease accessory protein UreG SWALL:UREG_BORBR (SWALL:O06709) (214 aa) fasta scores: E(): 2.3e-55, 77.83% id in 203 aa and to Ralstonia solanacearum probable urease accessory protein UreG or rsc2029 or rs03595 SWALL:Q8XXT4 (EMBL:AL646067) (210 aa) fasta scores: E(): 5.2e-60, 86.7% id in 203 aa; urease accessory protein 3185434 ureG 3093272 ureG Burkholderia pseudomallei K96243 urease accessory protein YP_109258.1 3184784 D 272560 CDS YP_109259.1 53720273 3094084 complement(3185671..3187056) 1 NC_006350.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 3187056 waaA 3094084 waaA Burkholderia pseudomallei K96243 3-deoxy-D-manno-octulosonic-acid transferase YP_109259.1 3185671 R 272560 CDS YP_109260.1 53720274 3094875 complement(3187094..3187978) 1 NC_006350.1 Similar to Yersinia pestis hypothetical protein Ypo1650 SWALL:Q8ZFP4 (EMBL:AJ414149) (300 aa) fasta scores: E(): 2.3e-53, 51.86% id in 295 aa; hypothetical protein 3187978 3094875 BPSL2664 Burkholderia pseudomallei K96243 hypothetical protein YP_109260.1 3187094 R 272560 CDS YP_109261.1 53720275 3093034 complement(3187994..3188989) 1 NC_006350.1 Similar to Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or rfa-2 or b3621 SWALL:RFAC_ECOLI (SWALL:P24173) (319 aa) fasta scores: E(): 2.1e-16, 38.71% id in 310 aa, and to Burkholderia cepacia heptosyltransferase I WaaC SWALL:Q937V3 (EMBL:AJ302064) (331 aa) fasta scores: E(): 1.7e-117, 89.12% id in 331 aa; lipopolysaccharide heptosyltransferase-1 3188989 waaC1 3093034 waaC1 Burkholderia pseudomallei K96243 lipopolysaccharide heptosyltransferase-1 YP_109261.1 3187994 R 272560 CDS YP_109262.1 53720276 3094110 complement(3189170..3190564) 1 NC_006350.1 Similar to Neisseria meningitidis phosphoglucomutase Pgm or nmb0790 SWALL:PGMU_NEIMB (SWALL:P40391) (460 aa) fasta scores: E(): 1.2e-98, 56% id in 466 aa and to Ralstonia solanacearum phosphomannomutase or phosphoglucomutase rsc0691 or rs01596 SWALL:Q8Y1J9 (EMBL:AL646060) (461 aa) fasta scores: E(): 1.6e-123, 68.46% id in 463 aa; phosphoglucomutase 3190564 pgm 3094110 pgm Burkholderia pseudomallei K96243 phosphoglucomutase YP_109262.1 3189170 R 272560 CDS YP_109263.1 53720277 3094876 3190822..3192081 1 NC_006350.1 Similar to Escherichia coli lipopolysaccharide biosynthesis protein WzxC or Wzx or b2046 SWALL:WZXC_ECOLI (SWALL:P77377) (492 aa) fasta scores: E(): 0.012, 22.33% id in 412 aa, Ralstonia solanacearum lipopolysaccharide O-side chain biosynthesis transmembrane protein rsc0686 or rs01591 SWALL:Q8Y1K4 (EMBL:AL646060) (422 aa) fasta scores: E(): 1.6e-26, 28.7% id in 425 aa and to Salmonella typhimurium O-antigen translocase in LPS biosyntesis WzxE or stm3926 SWALL:Q9L6Q9 (EMBL:AE008883) (416 aa) fasta scores: E(): 5.7e-08, 24.39% id in 410 aa; lipopolysaccharide biosynthesis protein 3192081 3094876 BPSL2667 Burkholderia pseudomallei K96243 lipopolysaccharide biosynthesis protein YP_109263.1 3190822 D 272560 CDS YP_109264.1 53720278 3093406 3192078..3192914 1 NC_006350.1 Weakly similar to Rhizobium loti probable glycosyl transferase mlr1944 SWALL:Q98JH2 (EMBL:AP002998) (368 aa) fasta scores: E(): 1.2e-09, 31.81% id in 220 aa and to Vibrio cholerae sugar transferase SWALL:O34234 (EMBL:Y07786) (337 aa) fasta scores: E(): 2e-09, 27.14% id in 210 aa; glycosyl transferase 3192914 3093406 BPSL2668 Burkholderia pseudomallei K96243 glycosyl transferase YP_109264.1 3192078 D 272560 CDS YP_109265.1 53720279 3093407 3192943..3194100 1 NC_006350.1 Similar to Rhizobium meliloti glycosyltransferase rb0735 or smb21231 SWALL:Q92VG9 (EMBL:AL603644) (384 aa) fasta scores: E(): 1.3e-45, 42.26% id in 362 aa, and to Pseudomonas aeruginosa probable glycosyl transferase pa1385 SWALL:Q9I3V9 (EMBL:AE004568) (374 aa) fasta scores: E(): 4.1e-40, 36.61% id in 366 aa; glycosyl transferase 3194100 3093407 BPSL2669 Burkholderia pseudomallei K96243 glycosyl transferase YP_109265.1 3192943 D 272560 CDS YP_109266.1 53720280 3094520 3194115..3195137 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei UDP-glucose 4-epimerase SWALL:O69132 (EMBL:AF064070) (340 aa) fasta scores: E(): 3.1e-125, 100% id in 340 aa and similar to Bacillus subtilis UDP-glucose 4-epimerase GalE SWALL:GALE_BACSU (SWALL:P55180) (339 aa) fasta scores: E(): 6.8e-80, 65.16% id in 333 aa; UDP-glucose 4-epimerase 3195137 3094520 BPSL2670 Burkholderia pseudomallei K96243 UDP-glucose 4-epimerase YP_109266.1 3194115 D 272560 CDS YP_109267.1 53720281 3094521 3195165..3196271 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei undecaprenyl phosphate N-acetylglucosaminyltransferase SWALL:O69131 (EMBL:AF064070) (368 aa) fasta scores: E(): 1.8e-136, 100% id in 368 aa, and to Sulfolobus acidocaldarius UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase GnpTA SWALL:GPT_SULAC (SWALL:P39465) (328 aa) fasta scores: E(): 2.2e-12, 29.21% id in 291 aa; undecaprenyl phosphate N-acetylglucosaminyltransferase 3196271 3094521 BPSL2671 Burkholderia pseudomallei K96243 undecaprenyl phosphate N-acetylglucosaminyltransferase YP_109267.1 3195165 D 272560 CDS YP_109268.1 53720282 3093475 complement(3196645..3198558) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei epimerase/dehydratase WbiI SWALL:O69130 (EMBL:AF064070) (637 aa) fasta scores: E(): 0, 99.68% id in 637 aa and similar to Staphylococcus aureus capsular polysaccharide biosynthesis protein CapD SWALL:CAPD_STAAU (SWALL:P39853) (599 aa) fasta scores: E(): 3.5e-77, 40.51% id in 580 aa and to Burkholderia mallei epimerase/dehydratase WbiI SWALL:Q9AEU8 (EMBL:AY028370) (637 aa) fasta scores: E(): 0, 100% id in 637 aa; epimerase/dehydratase polysaccharide-related biosynthesis protein 3198558 wbiI 3093475 wbiI Burkholderia pseudomallei K96243 epimerase/dehydratase polysaccharide-related biosynthesis protein YP_109268.1 3196645 R 272560 CDS YP_109269.1 53720283 3093474 complement(3198565..3199575) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei undecaprenyl phosphate N-acetylglucosaminyltransferase WbiH SWALL:O69129 (EMBL:AF064070) (336 aa) fasta scores: E(): 1e-130, 100% id in 336 aa. Also similar to Xanthomonas axonopodis lipopolysaccharide core biosynthesis protein rfb303 or xac2294 SWALL:AAM37147 (EMBL:AE011866) (322 aa) fasta scores: E(): 8.6e-23, 34.51% id in 310 aa; undecaprenyl phosphate N-acetylglucosaminyltransferase 3199575 wbiH 3093474 wbiH Burkholderia pseudomallei K96243 undecaprenyl phosphate N-acetylglucosaminyltransferase YP_109269.1 3198565 R 272560 CDS YP_109270.1 53720284 3092846 complement(3199593..3200558) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei epimerase/dehydratase WbiG SWALL:O69128 (EMBL:AF064070) (321 aa) fasta scores: E(): 8.6e-126, 99.37% id in 321 aa. Also similar to Vibrio cholerae UDP-glucose 4-epimerase GalE or WbfT SWALL:GALE_VIBCH (SWALL:Q56623) (328 aa) fasta scores: E(): 5.1e-38, 37.57% id in 322 aa; epimerase/dehydratase 3200558 wbiG 3092846 wbiG Burkholderia pseudomallei K96243 epimerase/dehydratase YP_109270.1 3199593 R 272560 CDS YP_109271.1 53720285 3092845 complement(3200555..3201385) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei glycosyl transferase WbiF SWALL:O69127 (EMBL:AF064070) (276 aa) fasta scores: E(): 2e-117, 99.63% id in 276 aa. Also similar to Burkholderia mallei glycosyl transferase WbiF SWALL:Q9AEU9 (EMBL:AY028370) (276 aa) fasta scores: E(): 1.7e-116, 98.91% id in 276 aa and to Ralstonia solanacearum probable glycosyl transferase rsc0688 or rs01593 SWALL:Q8Y1K2 (EMBL:AL646060) (275 aa) fasta scores: E(): 7.4e-23, 32.46% id in 268 aa; glycosyl transferase 3201385 wbiF 3092845 wbiF Burkholderia pseudomallei K96243 glycosyl transferase YP_109271.1 3200555 R 272560 CDS YP_109272.1 53720286 3092805 complement(3201460..3203301) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei glycosyl transferase WbiE SWALL:O69126 (EMBL:AF064070) (613 aa) fasta scores: E(): 0, 99.51% id in 613 aa.Also similar to Burkholderia mallei glycosyl transferase WbiE SWALL:Q9AEV0 (EMBL:AY028370) (613 aa) fasta scores: E(): 0, 99.67% id in 613 aa; glycosyl transferase 3203301 wbiE 3092805 wbiE Burkholderia pseudomallei K96243 glycosyl transferase YP_109272.1 3201460 R 272560 CDS YP_109273.1 53720287 3093124 complement(3203353..3205077) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei O-antigen methyl transferase WbiD SWALL:O69125 (EMBL:AF064070) (574 aa) fasta scores: E(): 0, 99.65% id in 574 aa. Also similar to Burkholderia mallei O-antigen methyl transferase WbiD SWALL:Q9AEV1 (EMBL:AY028370) (574 aa) fasta scores: E(): 0, 99.47% id in 574 aa and to Rhizobium loti O-antigen methyl transferase mlr7341 SWALL:Q986I5 (EMBL:AP003011) (664 aa) fasta scores: E(): 3.9e-75, 39.27% id in 555 aa; O-antigen methyl transferase 3205077 wbiD 3093124 wbiD Burkholderia pseudomallei K96243 O-antigen methyl transferase YP_109273.1 3203353 R 272560 CDS YP_109274.1 53720288 3093123 complement(3205081..3206004) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei glycosyl transferase WbiC SWALL:O69124 (EMBL:AF064070) (307 aa) fasta scores: E(): 7e-121, 100% id in 307 aa. Also similar to Rhizobium loti glycosyl transferase mlr7339 SWALL:Q986I6 (EMBL:AP003011) (296 aa) fasta scores: E(): 5.3e-54, 48.82% id in 297 aa; glycosyl transferase 3206004 wbiC 3093123 wbiC Burkholderia pseudomallei K96243 glycosyl transferase YP_109274.1 3205081 R 272560 CDS YP_109275.1 53720289 3094051 complement(3206025..3207116) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei epimerase/dehydratase WbiB SWALL:O69123 (EMBL:AF064070) (363 aa) fasta scores: E(): 1e-138, 100% id in 363 aa. Also similar to Burkholderia mallei epimerase/dehydratase WbiB SWALL:Q9AEV2 (EMBL:AY028370) (363 aa) fasta scores: E(): 2.1e-138, 99.72% id in 363 aa and to Rhizobium loti sugar nucleotide epimerase/dehydratase mlr7558 SWALL:Q985R8 (EMBL:AP003012) (352 aa) fasta scores: E(): 1.3e-76, 57.71% id in 350 aa; epimerase/dehydratase 3207116 wbiB 3094051 wbiB Burkholderia pseudomallei K96243 epimerase/dehydratase YP_109275.1 3206025 R 272560 CDS YP_109276.1 53720290 3094050 complement(3207116..3208354) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei O-antigen acetylase WbiA SWALL:O69122 (EMBL:AF064070) (412 aa) fasta scores: E(): 3.9e-175, 100% id in 412 aa. Also similar to Burkholderia thailandensis O-antigen acetylase WbiA SWALL:Q93SI5 (EMBL:AY033501) (412 aa) fasta scores: E(): 4.5e-166, 94.9% id in 412 aa; O-antigen acetylase 3208354 wbiA 3094050 wbiA Burkholderia pseudomallei K96243 O-antigen acetylase YP_109276.1 3207116 R 272560 CDS YP_109277.1 53720291 3092886 complement(3208351..3209760) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei ABC-2 transporter hydrophilic component Wzt SWALL:O69121 (EMBL:AF064070) (469 aa) fasta scores: E(): 2.1e-157, 100% id in 469 aa. Also similar to Burkholderia mallei ABC-2 transporter hydrophilic component Wzt SWALL:Q9AEV3 (EMBL:AY028370) (469 aa) fasta scores: E(): 1.7e-156, 99.57% id in 469 aa and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa1386 SWALL:Q9I3V8 (EMBL:AE004568) (422 aa) fasta scores: E(): 5.3e-35, 40.04% id in 427 aa; ABC transporter ATP-binding protein 3209760 wzt 3092886 wzt Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_109277.1 3208351 R 272560 CDS YP_109278.1 53720292 3093940 complement(3209750..3210583) 1 NC_006350.1 Identical to Burkholderia mallei ABC-2 transporter integral membrane component Wzm SWALL:Q9AEV4 (EMBL:AY028370) (277 aa) fasta scores: E(): 3.9e-105, 100% id in 277 aa. Similar to Serratia marcescens ABC transporter system integral membrane protein SWALL:O52482 (EMBL:AF038816) (277 aa) fasta scores: E(): 2.5e-58, 57.46% id in 268 aa; ABC transporter membrane permease 3210583 wzm 3093940 wzm Burkholderia pseudomallei K96243 ABC transporter membrane permease YP_109278.1 3209750 R 272560 CDS YP_109279.1 53720293 3093148 complement(3210610..3211506) 1 NC_006350.1 Similar to Escherichia coli dTDP-4-dehydrorhamnose reductase RfbD or Rmld or b2040 SWALL:RBD1_ECOLI (SWALL:P37760) (299 aa) fasta scores: E(): 3.8e-46, 44.51% id in 301 aa. Previously sequenced as Burkholderia pseudomallei dTDP-4-keto-L-rhamnose reductase RmlD SWALL:O69119 (EMBL:AF064070) (298 aa) fasta scores: E(): 4e-112, 100% id in 298 aa; dTDP-4-dehydrorhamnose reductase 3211506 rmlD 3093148 rmlD Burkholderia pseudomallei K96243 dTDP-4-dehydrorhamnose reductase YP_109279.1 3210610 R 272560 CDS YP_109280.1 53720294 3091968 complement(3211503..3212054) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase RmlC SWALL:O69118 (EMBL:AF064070) (183 aa) fasta scores: E(): 4.2e-74, 100% id in 183 aa and similar to Shigella boydii dTDP-6-deoxy-D-glucose-3,5 epimerase RmlC SWALL:Q93CV1 (EMBL:AF402312) (189 aa) fasta scores: E(): 6.3e-44, 61.79% id in 178 aa; dTDP-6-deoxy-D-glucose-3,5 epimerase 3212054 rmlC 3091968 rmlC Burkholderia pseudomallei K96243 dTDP-6-deoxy-D-glucose-3,5 epimerase YP_109280.1 3211503 R 272560 CDS YP_109281.1 53720295 3093247 complement(3212039..3212932) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei glucose-1-phosphate thymidyltransferase RmlA SWALL:O69117 (EMBL:AF064070) (297 aa) fasta scores: E(): 1.6e-120, 100% id in 297 aa and similar to Salmonella anatum glucose-1-phosphate thymidylyltransferase RfbA SWALL:RFBA_SALAN (SWALL:P55254) (292 aa) fasta scores: E(): 8.8e-87, 73.07% id in 286 aa; glucose-1-phosphate thymidylyltransferase 3212932 rmlA 3093247 rmlA Burkholderia pseudomallei K96243 glucose-1-phosphate thymidylyltransferase YP_109281.1 3212039 R 272560 CDS YP_109282.1 53720296 3091967 complement(3212944..3214005) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei dTDP-D-glucose 4,6-dehydratase RmlB SWALL:O69116 (EMBL:AF064070) (353 aa) fasta scores: E(): 5.6e-143, 100% id in 353 aa and similar to Xanthomonas campestris dTDP-glucose 4,6-dehydratase RfbB or RmlB or xcc0621 SWALL:RFBB_XANCP (SWALL:P55295) (351 aa) fasta scores: E(): 1.2e-88, 66.56% id in 341 aa; dTDP-glucose 4,6-dehydratase 3214005 rmlB 3091967 rmlB Burkholderia pseudomallei K96243 dTDP-glucose 4,6-dehydratase YP_109282.1 3212944 R 272560 CDS YP_109283.1 53720297 3092602 3214383..3215231 1 NC_006350.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 3215231 apaH 3092602 apaH Burkholderia pseudomallei K96243 diadenosine tetraphosphatase YP_109283.1 3214383 D 272560 CDS YP_109284.1 53720298 3092632 complement(3215361..3216230) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei 1-acyl-SN-glycerol-3-phosphate acyltransferase PlsC SWALL:O69114 (EMBL:AF064070) (289 aa) fasta scores: E(): 1.5e-111, 100% id in 289 aa. Also highly similar to Neisseria meningitidis 1-acyl-SN-glycerol-3-phosphate acyltransferase Plsc or nmb1294 SWALL:PLSC_NEIMB (SWALL:Q9JZ47) (255 aa) fasta scores: E(): 3.4e-18, 33.88% id in 242 aa; 1-acyl-SN-glycerol-3-phosphate acyltransferase 3216230 plsC 3092632 plsC Burkholderia pseudomallei K96243 1-acyl-SN-glycerol-3-phosphate acyltransferase YP_109284.1 3215361 R 272560 CDS YP_109285.1 53720299 3092915 complement(3216245..3217522) 1 NC_006350.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 3217522 pyrX 3092915 pyrX Burkholderia pseudomallei K96243 dihydroorotase YP_109285.1 3216245 R 272560 CDS YP_109286.1 53720300 3093493 complement(3217614..3218645) 1 NC_006350.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 3218645 pyrB 3093493 pyrB Burkholderia pseudomallei K96243 aspartate carbamoyltransferase YP_109286.1 3217614 R 272560 CDS YP_109287.1 53720301 3093162 complement(3218726..3219244) 1 NC_006350.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 3219244 pyrR 3093162 pyrR Burkholderia pseudomallei K96243 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_109287.1 3218726 R 272560 CDS YP_109288.1 53720302 3093865 complement(3219231..3219671) 1 NC_006350.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 3219671 3093865 BPSL2692 Burkholderia pseudomallei K96243 Holliday junction resolvase-like protein YP_109288.1 3219231 R 272560 CDS YP_109289.1 53720303 3093866 complement(3219668..3220246) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0675 or rs01580 SWALL:Q8Y1L5 (EMBL:AL646060) (190 aa) fasta scores: E(): 6e-57, 76.04% id in 192 aa and to Pseudomonas aeruginosa hypothetical protein AlgH or pa0405 SWALL:Q9RQ16 (EMBL:AF137022) (189 aa) fasta scores: E(): 1.4e-35, 53.88% id in 193 aa; hypothetical protein 3220246 3093866 BPSL2693 Burkholderia pseudomallei K96243 hypothetical protein YP_109289.1 3219668 R 272560 CDS YP_109290.1 53720304 3093855 complement(3220452..3221783) 1 NC_006350.1 hypothetical protein 3221783 3093855 BPSL2694 Burkholderia pseudomallei K96243 hypothetical protein YP_109290.1 3220452 R 272560 CDS YP_109291.1 53720305 3092277 complement(3221882..3222052) 1 NC_006350.1 Highly similar to Acinetobacter calcoaceticus rubredoxin RubA SWALL:RUBR_ACICA (SWALL:P42453) (54 aa) fasta scores: E(): 1e-15, 60.37% id in 53 aa and to Ralstonia solanacearum probable rubredoxin protein rsc0667 or rs01572 SWALL:Q8Y1M3 (EMBL:AL646060) (60 aa) fasta scores: E(): 7.6e-23, 87.5% id in 56 aa; rubredoxin 3222052 rubA 3092277 rubA Burkholderia pseudomallei K96243 rubredoxin YP_109291.1 3221882 R 272560 CDS YP_109292.1 53720306 3093856 3222272..3223120 1 NC_006350.1 Weakly similar to many including: Pseudomonas aeruginosa phosphomethylpyrimidine kinase ThiD or pa3975 SWALL:Q9HX41 (EMBL:AE004815) (265 aa) fasta scores: E(): 2.1e-19, 34.1% id in 261 aa, and to Streptomyces coelicolor phosphomethylpyrimidine kinase ThiD or sco5563 or sc7a1.07 SWALL:THID_STRCO (SWALL:Q9ZBR6) (269 aa) fasta scores: E(): 6.8e-15, 33.96% id in 265 aa; kinase 3223120 3093856 BPSL2696 Burkholderia pseudomallei K96243 kinase YP_109292.1 3222272 D 272560 CDS YP_109293.1 53720307 3094280 complement(3223479..3225119) 1 NC_006350.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 3225119 groEL 3094280 groEL Burkholderia pseudomallei K96243 molecular chaperone GroEL YP_109293.1 3223479 R 272560 CDS YP_109294.1 53720308 3094607 complement(3225167..3225460) 1 NC_006350.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 3225460 groES 3094607 groES Burkholderia pseudomallei K96243 co-chaperonin GroES YP_109294.1 3225167 R 272560 CDS YP_109295.1 53720309 3091876 complement(3226050..3228209) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsp0803 or rs01904 SWALL:Q8XRM8 (EMBL:AL646081) (667 aa) fasta scores: E(): 4.3e-26, 34.31% id in 746 aa. Note the product of this CDS is highly repetitive with a 4.5 X STLQNAAANNPLSGVASNAVGTLTNLANNNPLPGALSNAVGTLQNAATNNPLSGVASN A VGTLTNLANNNPLPGALSNAV degenerate repeat sequence; hypothetical protein 3228209 3091876 BPSL2699 Burkholderia pseudomallei K96243 hypothetical protein YP_109295.1 3226050 R 272560 CDS YP_109296.1 53720310 3091877 complement(3229267..3229701) 1 NC_006350.1 Similar to several including: Bacillus halodurans cinnamoyl ester hydrolase bh0737 SWALL:Q9KEW2 (EMBL:AP001509) (118 aa) fasta scores: E(): 3.9e-22, 58.71% id in 109 aa and to Bacillus subtilis hypothetical protein YybR SWALL:YYBR_BACSU (SWALL:P37486) (125 aa) fasta scores: E(): 2.8e-21, 60.39% id in 101 aa; hypothetical protein 3229701 3091877 BPSL2700 Burkholderia pseudomallei K96243 hypothetical protein YP_109296.1 3229267 R 272560 CDS YP_109297.1 53720311 3094446 3229950..3230957 1 NC_006350.1 Similar to many alcohol dehydrogenases including: Xanthomonas campestris xcc2730 SWALL:Q8P783 (EMBL:AE012386) (335 aa) fasta scores: E(): 1.6e-86, 71.77% id in 333 aa and to Rhizobium loti alcohol dehydrogenase, NADPH quinone oxidoreductase mll3915 SWALL:Q98F62 (EMBL:AP003003) (338 aa) fasta scores: E(): 7.5e-43, 43.28% id in 335 aa; alcohol dehydrogenase 3230957 3094446 BPSL2701 Burkholderia pseudomallei K96243 alcohol dehydrogenase YP_109297.1 3229950 D 272560 CDS YP_109298.1 53720312 3094447 complement(3230981..3231949) 1 NC_006350.1 hypothetical protein 3231949 3094447 BPSL2702 Burkholderia pseudomallei K96243 hypothetical protein YP_109298.1 3230981 R 272560 CDS YP_109299.1 53720313 3094189 complement(3232494..3233009) 1 NC_006350.1 Similar to Pseudomonas fluorescens protein activator of alkane oxidation PraB SWALL:Q9AE74 (EMBL:AJ009579) (168 aa) fasta scores: E(): 1.8e-07, 30.67% id in 163 aa and to Pseudomonas aeruginosa protein activator precursor Pra or pa4590 SWALL:Q51428 (EMBL:L08966) (162 aa) fasta scores: E(): 2.8e-06, 30.28% id in 175 aa; hypothetical protein 3233009 3094189 BPSL2703 Burkholderia pseudomallei K96243 hypothetical protein YP_109299.1 3232494 R 272560 CDS YP_109300.1 53720314 3094190 complement(3233125..3234030) 1 NC_006350.1 Similar in part to Ralstonia solanacearum outer membrane Wsignal peptide protein OmpW or rsc3350 or rs02625 SWALL:Q8XU43 (EMBL:AL646074) (241 aa) fasta scores: E(): 0.00076, 34.67% id in 274 aa; OmpW family exported protein 3234030 3094190 BPSL2704 Burkholderia pseudomallei K96243 OmpW family exported protein YP_109300.1 3233125 R 272560 CDS YP_109301.1 53720315 3093984 complement(3234027..3235280) 1 NC_006350.1 lipoprotein 3235280 3093984 BPSL2705 Burkholderia pseudomallei K96243 lipoprotein YP_109301.1 3234027 R 272560 CDS YP_109302.1 53720316 3093985 complement(3235340..3236938) 1 NC_006350.1 Weakly similar to Ralstonia solanacearum lipoprotein rsp0116 or rs03006 SWALL:Q8XTJ2 (EMBL:AL646076) (427 aa) fasta scores: E(): 0.00043, 25.05% id in 439 aa; lipoprotein 3236938 3093985 BPSL2706 Burkholderia pseudomallei K96243 lipoprotein YP_109302.1 3235340 R 272560 CDS YP_109303.1 53720317 3091690 complement(3237675..3238121) 1 NC_006350.1 Similar to Agrobacterium tumefaciens hypothetical protein Agr_c_1731p SWALL:Q8U5H0 (EMBL:AE008025) (190 aa) fasta scores: E(): 1.6e-23, 58.77% id in 114 aa, and to Xylella fastidiosa hypothetical protein Xf0240 SWALL:Q9PGQ8 (EMBL:AE003878) (142 aa) fasta scores: E(): 8.5e-18, 47.82% id in 115 aa; hypothetical protein 3238121 3091690 BPSL2707 Burkholderia pseudomallei K96243 hypothetical protein YP_109303.1 3237675 R 272560 CDS YP_109304.1 53720318 3091691 3238401..3239633 1 NC_006350.1 Similar to several proteins of undefined function including: Yersinia pestis exported protein Ypo0800 SWALL:Q8ZHT4 (EMBL:AJ414144) (295 aa) fasta scores: E(): 4.4e-66, 59.58% id in 287 aa and Pseudomonas aeruginosa hypothetical protein Pa0057 SWALL:Q9I775 (EMBL:AE004445) (295 aa) fasta scores: E(): 1.1e-64, 60.2% id in 299 aa; exported metallo-beta-lactamase-family protein 3239633 3091691 BPSL2708 Burkholderia pseudomallei K96243 exported metallo-beta-lactamase-family protein YP_109304.1 3238401 D 272560 CDS YP_109305.1 53720319 3093465 3239812..3240399 1 NC_006350.1 Similar to Streptomyces coelicolor DNA-binding protein Sco6802 or sc1a2.11 SWALL:Q9L230 (EMBL:AL138598) (192 aa) fasta scores: E(): 5.8e-21, 43.95% id in 182 aa and to Ralstonia solanacearum transcription regulatory protein rsc3132 or rs00471 SWALL:Q8XUQ4 (EMBL:AL646073) (209 aa) fasta scores: E(): 8.6e-38, 58.33% id in 192 aa; DNA-binding protein 3240399 3093465 BPSL2709 Burkholderia pseudomallei K96243 DNA-binding protein YP_109305.1 3239812 D 272560 CDS YP_109306.1 53720320 3093466 3240396..3240923 1 NC_006350.1 Similar to Pseudomonas syringae acetyltransferase (tabtoxin resistance protein) Ttr SWALL:TTR_PSESZ (SWALL:P16966) (177 aa) fasta scores: E(): 6.6e-11, 32.95% id in 176 aa and to Pseudomonas aeruginosa hypothetical protein Pa1885 SWALL:Q9I2L2 (EMBL:AE004614) (177 aa) fasta scores: E(): 7.2e-39, 63.9% id in 169 aa, and to Agrobacterium tumefaciens acetyltransferase atu0246 or agr_c_420 SWALL:Q8UIP7 (EMBL:AE008997) (172 aa) fasta scores: E(): 1.1e-28, 50.88% id in 169 aa; acetyltransferase 3240923 3093466 BPSL2710 Burkholderia pseudomallei K96243 acetyltransferase YP_109306.1 3240396 D 272560 CDS YP_109307.1 53720321 3093194 3241273..3241896 1 NC_006350.1 Similar to Agrobacterium tumefaciens RhtB family transporter atu1170 or agr_c_2164 SWALL:Q8UG71 (EMBL:AE009080) (210 aa) fasta scores: E(): 5.3e-25, 39.28% id in 196 aa, Caulobacter crescentus efflux protein, lyse family cc0029 SWALL:Q9AC37 (EMBL:AE005677) (210 aa) fasta scores: E(): 3.1e-11, 31.03% id in 203 aa, and to Escherichia coli, Escherichia coli O6 and Escherichia coli O157:H7 homoserine/homoserine lactone efflux protein RhtB or b3824 or c4746 or z5345 or ecs4754 SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 1.3e-09, 27.58% id in 203 aa; amino acid transporter LysE 3241896 3093194 BPSL2711 Burkholderia pseudomallei K96243 amino acid transporter LysE YP_109307.1 3241273 D 272560 CDS YP_109308.1 53720322 3093195 3242349..3243485 1 NC_006350.1 Similar to Ralstonia solanacearum glycerophosphoryl diester phosphodiesterase, periplasmic precursor protein GlpQ or rsc0502 or rs05020 SWALL:Q8Y234 (EMBL:AL646059) (378 aa) fasta scores: E(): 4.4e-95, 68.66% id in 383 aa, and to Xanthomonas campestris glycerophosphoryl diester phosphodiesterase GlpQ or xcc4234 SWALL:AAM43450 (EMBL:AE012551) (370 aa) fasta scores: E(): 1.5e-65, 55.75% id in 339 aa; hydrolase 3243485 3093195 BPSL2712 Burkholderia pseudomallei K96243 hydrolase YP_109308.1 3242349 D 272560 CDS YP_109309.1 53720323 3094407 3243615..3245057 1 NC_006350.1 Similar to Streptomyces coelicolor transmembrane transport protein Sco2309 or scc30.17C SWALL:Q9L004 (EMBL:AL352972) (489 aa) fasta scores: E(): 1.4e-58, 42.79% id in 458 aa, Streptomyces roseofulvus antibiotic antiporter FrnF SWALL:O68912 (EMBL:AF058302) (517 aa) fasta scores: E(): 1.1e-57, 41.17% id in 476 aa and to Streptomyces lipmanii puromycin resistance protein Pur8 SWALL:PUR8_STRLP (SWALL:P42670) (503 aa) fasta scores: E(): 2.3e-53, 39.33% id in 478 aa; membrane transport protein 3245057 3094407 BPSL2713 Burkholderia pseudomallei K96243 membrane transport protein YP_109309.1 3243615 D 272560 CDS YP_109310.1 53720324 3094408 3245554..3246342 1 NC_006350.1 Similar to several including: Ralstonia solanacearum probable transmembrane protein rsc2426 or rs02683 SWALL:Q8XWP7 (EMBL:AL646070) (253 aa) fasta scores: E(): 5.2e-39, 49.4% id in 253 aa and to Bacillus subtilis hypothetical protein YjnA SWALL:O34578 (EMBL:AF015825) (254 aa) fasta scores: E(): 1.3e-28, 38.88% id in 252 aa; hypothetical protein 3246342 3094408 BPSL2714 Burkholderia pseudomallei K96243 hypothetical protein YP_109310.1 3245554 D 272560 CDS YP_109311.1 53720325 3092215 complement(3246675..3248522) 1 NC_006350.1 Similar to several proteins of unknown function including: Deinococcus radiodurans carboxypeptidase-related protein dr0964 SWALL:Q9RVQ8 (EMBL:AE001948) (500 aa) fasta scores: E(): 2.8e-24, 34.68% id in 542 aa, and to Caulobacter crescentus hypothetical protein Cc3418 cc3418 SWALL:Q9A2Y8 (EMBL:AE006002) (504 aa) fasta scores: E(): 1.6e-21, 31.11% id in 540 aa; lipoprotein 3248522 3092215 BPSL2715 Burkholderia pseudomallei K96243 lipoprotein YP_109311.1 3246675 R 272560 CDS YP_109312.1 53720326 3092216 complement(3249128..3251227) 1 NC_006350.1 Similar to Ralstonia solanacearum probable D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane rsc1334 or rs02856 SWALL:Q8XZR1 (EMBL:AL646064) (725 aa) fasta scores: E(): 6.5e-92, 49.58% id in 728 aa and to Alcaligenes eutrophus D--3-hydroxybutyrate oligomer hydrolase SWALL:O05992 (EMBL:AB003701) (757 aa) fasta scores: E(): 2.4e-111, 50.9% id in 715 aa; exported hydrolase 3251227 3092216 BPSL2716 Burkholderia pseudomallei K96243 exported hydrolase YP_109312.1 3249128 R 272560 CDS YP_109313.1 53720327 3093869 complement(3251347..3251715) 1 NC_006350.1 lipoprotein 3251715 3093869 BPSL2717 Burkholderia pseudomallei K96243 lipoprotein YP_109313.1 3251347 R 272560 CDS YP_109314.1 53720328 3093870 3252110..3253627 1 NC_006350.1 Weakly similar to Pseudomonas aeruginosa hypothetical protein Pa3848 SWALL:Q9HXF8 (EMBL:AE004802) (451 aa) fasta scores: E(): 1.9e-38, 34.45% id in 418 aa; hypothetical protein 3253627 3093870 BPSL2718 Burkholderia pseudomallei K96243 hypothetical protein YP_109314.1 3252110 D 272560 CDS YP_109315.1 53720329 3094046 3253725..3254363 1 NC_006350.1 Weakly similar to several including: Pseudomonas aeruginosa hypothetical protein Pa0118 SWALL:Q9I714 (EMBL:AE004450) (195 aa) fasta scores: E(): 1.4e-10, 29.1% id in 189 aa, and to Alcaligenes faecalis isomerase PhnD SWALL:Q9WXH0 (EMBL:AB024945) (196 aa) fasta scores: E(): 2.7e-08, 26.48% id in 185 aa; isomerase 3254363 3094046 BPSL2719 Burkholderia pseudomallei K96243 isomerase YP_109315.1 3253725 D 272560 CDS YP_109316.1 53720330 3094047 3254437..3255384 1 NC_006350.1 Similar to many LysR-family regultors: Ralstonia solanacearum probable transcription regulator protein rsc2094 or rs03659 SWALL:Q8XXL9 (EMBL:AL646068) (316 aa) fasta scores: E(): 3.3e-53, 47.98% id in 298 aa and to Pseudomonas putida transcriptional activator protein NahR SWALL:NAHR_PSEPU (SWALL:P10183) (300 aa) fasta scores: E(): 2.6e-25, 33.33% id in 294 aa; LysR family transcriptional regulator 3255384 3094047 BPSL2720 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_109316.1 3254437 D 272560 CDS YP_109317.1 53720331 3093422 complement(3255467..3256567) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable permease of ABC transporter pa2914 SWALL:Q9HZT3 (EMBL:AE004717) (343 aa) fasta scores: E(): 1.2e-56, 55.78% id in 346 aa and to Rhizobium loti ABC transporter permease mlr8229 SWALL:Q983Q1 (EMBL:AP003013) (349 aa) fasta scores: E(): 6.5e-44, 46.7% id in 364 aa; FecCD-family membrane transporter protein 3256567 3093422 BPSL2721 Burkholderia pseudomallei K96243 FecCD-family membrane transporter protein YP_109317.1 3255467 R 272560 CDS YP_109318.1 53720332 3093423 complement(3256564..3257607) 1 NC_006350.1 Similar to Streptomyces coelicolor iron transport lipoprotein Sco7218 or sc2h12.17 SWALL:Q9K467 (EMBL:AL359215) (345 aa) fasta scores: E(): 3.8e-41, 42.73% id in 337 aa and to Brucella melitensis iron transport protein bmeii0535 SWALL:Q8YCJ3 (EMBL:AE009689) (344 aa) fasta scores: E(): 4.8e-17, 28.69% id in 345 aa; membrane transport solute-binding protein 3257607 3093423 BPSL2722 Burkholderia pseudomallei K96243 membrane transport solute-binding protein YP_109318.1 3256564 R 272560 CDS YP_109319.1 53720333 3094842 complement(3257601..3258398) 1 NC_006350.1 Similar to Streptomyces coelicolor Fe uptake system permease FtrE or sco0998 or 2scg2.11 SWALL:Q9EX40 (EMBL:AL445963) (272 aa) fasta scores: E(): 2.4e-44, 53.51% id in 256 aa and to Bacillus halodurans iron (III) dicitrate transport system bh1587 SWALL:Q9KCI4 (EMBL:AP001512) (491 aa) fasta scores: E(): 1.5e-30, 42.08% id in 240 aa; Fe uptake system permease 3258398 3094842 BPSL2723 Burkholderia pseudomallei K96243 Fe uptake system permease YP_109319.1 3257601 R 272560 CDS YP_109320.1 53720334 3094843 complement(3258434..3260704) 1 NC_006350.1 Similar to Xanthomonas axonopodis TonB-dependent receptor FhuA or xac4062 SWALL:Q8PFC1 (EMBL:AE012054) (726 aa) fasta scores: E(): 8.7e-33, 30.99% id in 742 aa, Anabaena sp. ferrichrome-iron receptor all2148 SWALL:Q8YV33 (EMBL:AP003588) (863 aa) fasta scores: E(): 5.7e-28, 26.62% id in 725 aa and to Salmonella typhimurium ferrioxamine B receptor precursor FoxA or Stm0364 SWALL:FOXA_SALTY (SWALL:Q56145) (702 aa) fasta scores: E(): 7.4e-23, 24.6% id in 687 aa; TonB-dependent outer-membrane receptor protein 3260704 3094843 BPSL2724 Burkholderia pseudomallei K96243 TonB-dependent outer-membrane receptor protein YP_109320.1 3258434 R 272560 CDS YP_109321.1 53720335 3092261 complement(3261197..3261667) 1 NC_006350.1 hypothetical protein 3261667 3092261 BPSL2725 Burkholderia pseudomallei K96243 hypothetical protein YP_109321.1 3261197 R 272560 CDS YP_109322.1 53720336 3092262 complement(3261786..3262568) 1 NC_006350.1 Weakly similar to several solute-binding proteins including: Escherichia coli molybdate-binding periplasmic protein precursor ModA or b0763 SWALL:MODA_ECOLI (SWALL:P37329) (257 aa) fasta scores: E(): 0.0012, 23.55% id in 259 aa and to Pseudomonas aeruginosa molybdate-binding periplasmic protein precursor ModA or pa1863 SWALL:Q9I2N2 (EMBL:AE004612) (251 aa) fasta scores: E(): 9.4e-07, 30% id in 250 aa; solute-binding periplasmic protein 3262568 3092262 BPSL2726 Burkholderia pseudomallei K96243 solute-binding periplasmic protein YP_109322.1 3261786 R 272560 CDS YP_109323.1 53720337 3092583 complement(3262952..3265315) 1 NC_006350.1 Similar to many xanthine dehydrogenases including: Brucella melitensis xanthine dehydrogenase bmei1575 SWALL:Q8YFE7 (EMBL:AE009593) (781 aa) fasta scores: E(): 8.4e-158, 56.29% id in 778 aa and to Comamonas acidovorans xanthine dehydrogenase large subunit XdhB SWALL:Q8RLC0 (EMBL:AY082333) (808 aa) fasta scores: E(): 1.7e-212, 70.44% id in 785 aa; xanthine dehydrogenase large subunit 3265315 xdhB 3092583 xdhB Burkholderia pseudomallei K96243 xanthine dehydrogenase large subunit YP_109323.1 3262952 R 272560 CDS YP_109324.1 53720338 3093191 complement(3265344..3266861) 1 NC_006350.1 Similar to many xanthine dehydrogenases including: Brucella melitensis bmei1576 SWALL:Q8YFE6 (EMBL:AE009593) (519 aa) fasta scores: E(): 1.3e-73, 48.18% id in 467 aa, and to Ralstonia solanacearum XdhA or rsc2095 or rs03660 SWALL:Q8XXL8 (EMBL:AL646068) (516 aa) fasta scores: E(): 7.7e-127, 65.94% id in 505 aa; xanthine dehydrogenase 3266861 xdhA 3093191 xdhA Burkholderia pseudomallei K96243 xanthine dehydrogenase YP_109324.1 3265344 R 272560 CDS YP_109325.1 53720339 3092273 3267141..3268364 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa1993 SWALL:Q9I2B6 (EMBL:AE004625) (402 aa) fasta scores: E(): 9.3e-82, 60% id in 400 aa, and to Salmonella typhimurium hypothetical protein yhhs or stm3581 SWALL:Q8ZLE4 (EMBL:AE008865) (419 aa) fasta scores: E(): 6.7e-63, 53.26% id in 383 aa; major facilitator superfamily transporter 3268364 3092273 BPSL2729 Burkholderia pseudomallei K96243 major facilitator superfamily transporter YP_109325.1 3267141 D 272560 CDS YP_109326.1 53720340 3092274 complement(3268890..3269840) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa3897 SWALL:Q9HXB6 (EMBL:AE004807) (300 aa) fasta scores: E(): 2.9e-56, 56.49% id in 285 aa and Ralstonia solanacearum transmembrane protein rsc0151 or rs01021 SWALL:Q8Y330 (EMBL:AL646057) (309 aa) fasta scores: E(): 3.5e-16, 30.52% id in 285 aa. Note an alternative possible translational start site at codon 21.; hypothetical protein 3269840 3092274 BPSL2730 Burkholderia pseudomallei K96243 hypothetical protein YP_109326.1 3268890 R 272560 CDS YP_109327.1 53720341 3091649 3269871..3270869 1 NC_006350.1 Similar to many proposed transcriptional regulators including: Ralstonia solanacearum probable transcription regulator protein rsp1157 or rs05428 SWALL:Q8XQR4 (EMBL:AL646083) (324 aa) fasta scores: E(): 8.9e-51, 47.41% id in 310 aa and Pseudomonas aeruginosa probable transcriptional regulator pa3898 SWALL:Q9HXB5 (EMBL:AE004807) (293 aa) fasta scores: E(): 3.4e-49, 47.81% id in 297 aa; AraC family transcriptional regulator 3270869 3091649 BPSL2731 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_109327.1 3269871 D 272560 CDS YP_109328.1 53720342 3091650 complement(3270894..3272108) 1 NC_006350.1 Similar to Vibrio cholerae aminotransferase, class V vc0392 SWALL:Q9KUW7 (EMBL:AE004127) (372 aa) fasta scores: E(): 7.1e-37, 34.53% id in 362 aa and to Anabaena sp. alanine--glyoxylate aminotransferase alr1004 SWALL:Q8YY48 (EMBL:AP003584) (381 aa) fasta scores: E(): 1.5e-34, 31.97% id in 369 aa; aminotransferase 3272108 3091650 BPSL2732 Burkholderia pseudomallei K96243 aminotransferase YP_109328.1 3270894 R 272560 CDS YP_109329.1 53720343 3092160 3273006..3273986 1 NC_006350.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsc0065 or rs02244 SWALL:Q8Y3B5 (EMBL:AL646057) (312 aa) fasta scores: E(): 2.4e-34, 35.55% id in 315 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0159 SWALL:Q9I6X3 (EMBL:AE004454) (312 aa) fasta scores: E(): 9.6e-32, 38.14% id in 291 aa; LysR family transcriptional regulator 3273986 3092160 BPSL2733 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_109329.1 3273006 D 272560 CDS YP_109330.1 53720344 3091675 3274033..3275037 1 NC_006350.1 Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase 3275037 ldhA 3091675 ldhA Burkholderia pseudomallei K96243 D-lactate dehydrogenase YP_109330.1 3274033 D 272560 CDS YP_109331.1 53720345 3092161 3275577..3276236 1 NC_006350.1 Similar to many including: Ralstonia solanacearum probable oxidoreductase rsp0614 or rs03753 SWALL:Q8XS67 (EMBL:AL646079) (216 aa) fasta scores: E(): 7.4e-61, 71.15% id in 208 aa and to Thermus thermophilus NADH dehydrogenase Nox SWALL:NOX_THETH (SWALL:Q60049) (205 aa) fasta scores: E(): 0.00054, 29.7% id in 202 aa; oxidoreductase 3276236 3092161 BPSL2735 Burkholderia pseudomallei K96243 oxidoreductase YP_109331.1 3275577 D 272560 CDS YP_109332.1 53720346 3092770 3276352..3277521 1 NC_006350.1 Similar to many membrane transporters including: Rhizobium loti transmembrane efflux protein mlr2770 SWALL:Q98HP8 (EMBL:AP003000) (391 aa) fasta scores: E(): 6.1e-77, 59.32% id in 386 aa and Pseudomonas aeruginosa probable mfs transporter pa4355 SWALL:Q9HW46 (EMBL:AE004851) (388 aa) fasta scores: E(): 2.8e-75, 58.29% id in 386 aa; major facilitator transporter 3277521 3092770 BPSL2736 Burkholderia pseudomallei K96243 major facilitator transporter YP_109332.1 3276352 D 272560 CDS YP_109333.1 53720347 3092771 3277789..3278985 1 NC_006350.1 Similar to many membrane transporters including: Pseudomonas aeruginosa probable MFS transporter pa5311 SWALL:Q9HTP3 (EMBL:AE004943) (387 aa) fasta scores: E(): 3.6e-36, 33.68% id in 383 aa and to Rhizobium meliloti transport transmembrane protein r01296 or smc01368 SWALL:Q92QM3 (EMBL:AL591786) (394 aa) fasta scores: E(): 2.4e-24, 28.61% id in 353 aa; major facilitator transporter 3278985 3092771 BPSL2737 Burkholderia pseudomallei K96243 major facilitator transporter YP_109333.1 3277789 D 272560 CDS YP_109334.1 53720348 3093948 complement(3279418..3280725) 1 NC_006350.1 Similar to Prokaryotic and Eukaryotic hydrolases including: Ralstonia solanacearum probable fumarylacetoacetase rsp0690 or rs01759 SWALL:Q8XRZ1 (EMBL:AL646080) (423 aa) fasta scores: E(): 7.1e-116, 69.23% id in 416 aa and to Homo sapiens fumarylacetoacetase Fah SWALL:FAAA_HUMAN (SWALL:P16930) (419 aa) fasta scores: E(): 2.1e-99, 57.17% id in 411 aa; hydrolase 3280725 3093948 BPSL2738 Burkholderia pseudomallei K96243 hydrolase YP_109334.1 3279418 R 272560 CDS YP_109335.1 53720349 3092129 complement(3280722..3282074) 1 NC_006350.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 3282074 hmgA 3092129 hmgA Burkholderia pseudomallei K96243 homogentisate 1,2-dioxygenase YP_109335.1 3280722 R 272560 CDS YP_109336.1 53720350 3093467 complement(3282075..3283430) 1 NC_006350.1 Similar to Pseudomonas putida 4-hydroxybenzoate transporter PcaK SWALL:PCAK_PSEPU (SWALL:Q51955) (448 aa) fasta scores: E(): 3.4e-57, 38.87% id in 445 aa, and to Acinetobacter calcoaceticus 4-hydroxybenzoate transporter pcaK SWALL:PCAK_ACICA (SWALL:Q43975) (457 aa) fasta scores: E(): 2.7e-49, 35.08% id in 439 aa; 4-hydroxybenzoate transporter 3283430 pcaK 3093467 pcaK Burkholderia pseudomallei K96243 4-hydroxybenzoate transporter YP_109336.1 3282075 R 272560 CDS YP_109337.1 53720351 3093949 complement(3283427..3283657) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp0701 rsp0701 or rs01748 SWALL:Q8XRY0 (EMBL:AL646080) (68 aa) fasta scores: E(): 3.1e-10, 55.4% id in 74 aa; hypothetical protein 3283657 3093949 BPSL2741 Burkholderia pseudomallei K96243 hypothetical protein YP_109337.1 3283427 R 272560 CDS YP_109338.1 53720352 3093208 complement(3283700..3285361) 1 NC_006350.1 Similar to many oxidoreductases including: Ralstonia solanacearum hypothetical oxidoreductase rsp0702 or rs01747 SWALL:Q8XRX9 (EMBL:AL646080) (563 aa) fasta scores: E(): 7e-141, 68.89% id in 553 aa, and to Escherichia coli 3-(3-hydroxy-phenyl)propionate mhpa or b0347 SWALL:MHPA_ECOLI (SWALL:P77397) (554 aa) fasta scores: E(): 9.2e-22, 26.78% id in 519 aa; FAD-dependent oxidoreductase 3285361 3093208 BPSL2742 Burkholderia pseudomallei K96243 FAD-dependent oxidoreductase YP_109338.1 3283700 R 272560 CDS YP_109339.1 53720353 3093209 complement(3285381..3286337) 1 NC_006350.1 Similar to many including: Ralstonia solanacearum hypothetical protein rsp0703 or rs01746 SWALL:Q8XRX8 (EMBL:AL646080) (319 aa) fasta scores: E(): 2.2e-80, 66.56% id in 317 aa, and to Streptomyces arenae cyclase ncnE SWALL:Q9X466 (EMBL:AF098966) (310 aa) fasta scores: E(): 3.7e-11, 28.8% id in 250 aa; oxidoreductase 3286337 3093209 BPSL2743 Burkholderia pseudomallei K96243 oxidoreductase YP_109339.1 3285381 R 272560 CDS YP_109340.1 53720354 3093793 3286594..3287400 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc1343 or rs02865 SWALL:Q8XZQ2 (EMBL:AL646064) (301 aa) fasta scores: E(): 8.6e-14, 30.76% id in 247 aa; hypothetical protein 3287400 3093793 BPSL2744 Burkholderia pseudomallei K96243 hypothetical protein YP_109340.1 3286594 D 272560 CDS YP_109341.1 53720355 3093794 complement(3287868..3288323) 1 NC_006350.1 Similar to many proteins of undefined function including: Pseudomonas aeruginosa hypothetical protein Pa5465 SWALL:Q9HTA5 (EMBL:AE004959) (139 aa) fasta scores: E(): 1e-18, 40.62% id in 128 aa and to Rhizobium meliloti hypothetical protein r01113 r01113 or smc02549 SWALL:Q92R18 (EMBL:AL591786) (159 aa) fasta scores: E(): 6.2e-18, 41.73% id in 127 aa. Note the alternative possible translational start site at codon 17; hypothetical protein 3288323 3093794 BPSL2745 Burkholderia pseudomallei K96243 hypothetical protein YP_109341.1 3287868 R 272560 CDS YP_109342.1 53720356 3092521 complement(3288720..3289544) 1 NC_006350.1 Similar to many regulators including: Escherichia coli acetate operon repressor IclR or b4018 SWALL:ICLR_ECOLI (SWALL:P16528) (274 aa) fasta scores: E(): 5.8e-09, 28.13% id in 231 aa and to Ralstonia solanacearum transcription regulator protein rsc0757 or rs05096 SWALL:Q8Y1D3 (EMBL:AL646060) (273 aa) fasta scores: E(): 3.7e-42, 52.59% id in 251 aa; IclR family transcriptional regulator 3289544 3092521 BPSL2746 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_109342.1 3288720 R 272560 CDS YP_109343.1 53720357 3092522 3289534..3290775 1 NC_006350.1 Similar to Prokaryotic and Eukaryotic dehydrogenases including: Rhizobium meliloti glutaryl-CoA dehydrogenase rb0847 or smb21181 SWALL:Q92V67 (EMBL:AL603645) (395 aa) fasta scores: E(): 7.9e-118, 72.98% id in 396 aa and to Homo sapiens glutaryl-CoA dehydrogenase, mitochondrial precursor GcdH SWALL:GCDH_HUMAN (SWALL:Q92947) (438 aa) fasta scores: E(): 1.9e-100, 64.6% id in 404 aa; glutaryl-CoA dehydrogenase 3290775 3092522 BPSL2747 Burkholderia pseudomallei K96243 glutaryl-CoA dehydrogenase YP_109343.1 3289534 D 272560 CDS YP_109344.1 53720358 3091891 complement(3291026..3291664) 1 NC_006350.1 Similar to Ralstonia solanacearum probable antioxidant rsc0754 or rs05099 SWALL:Q8Y1D6 (EMBL:AL646060) (212 aa) fasta scores: E(): 1.5e-73, 87.26% id in 212 aa, and to Pseudomonas putida thiol-specific antioxidant protein lsfA SWALL:BAC00970 (EMBL:AB086390) (212 aa) fasta scores: E(): 2.7e-71, 82.54% id in 212 aa; oxidoreductase 3291664 3091891 BPSL2748 Burkholderia pseudomallei K96243 oxidoreductase YP_109344.1 3291026 R 272560 CDS YP_109345.1 53720359 3091892 3291992..3292294 1 NC_006350.1 Similar to several including: Ralstonia solanacearum probable transmembrane protein rsc0753 or rs05100 SWALL:Q8Y1D7 (EMBL:AL646060) (108 aa) fasta scores: E(): 1e-21, 70.1% id in 97 aa and Pseudomonas aeruginosa hypothetical protein Pa3040 pa3040 SWALL:Q9HZG8 (EMBL:AE004729) (109 aa) fasta scores: E(): 1.6e-09, 43.43% id in 99 aa; hypothetical protein 3292294 3091892 BPSL2749 Burkholderia pseudomallei K96243 hypothetical protein YP_109345.1 3291992 D 272560 CDS YP_109346.1 53720360 3094765 3292418..3292807 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0752 or rs05101 SWALL:Q8Y1D8 (EMBL:AL646060) (125 aa) fasta scores: E(): 6.6e-25, 62.5% id in 112 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3041 SWALL:Q9HZG7 (EMBL:AE004729) (126 aa) fasta scores: E(): 1.6e-10, 38.52% id in 122 aa; hypothetical protein 3292807 3094765 BPSL2750 Burkholderia pseudomallei K96243 hypothetical protein YP_109346.1 3292418 D 272560 CDS YP_109347.1 53720361 3094766 3292857..3293315 1 NC_006350.1 hypothetical protein 3293315 3094766 BPSL2751 Burkholderia pseudomallei K96243 hypothetical protein YP_109347.1 3292857 D 272560 CDS YP_109348.1 53720362 3093952 complement(3293420..3293872) 1 NC_006350.1 Similar to Bacteroides nodosus fimbrial protein precursor FimA SWALL:FMAI_BACNO (SWALL:P17827) (161 aa) fasta scores: E(): 0.00043, 29.45% id in 129 aa, and to Xylella fastidiosa pilE protein xf0033 SWALL:Q9PHB1 (EMBL:AE003857) (139 aa) fasta scores: E(): 2.9e-07, 35.87% id in 131 aa; fimbrial protein 3293872 3093952 BPSL2752 Burkholderia pseudomallei K96243 fimbrial protein YP_109348.1 3293420 R 272560 CDS YP_109349.1 53720363 3093953 complement(3293892..3294488) 1 NC_006350.1 hypothetical protein 3294488 3093953 BPSL2753 Burkholderia pseudomallei K96243 hypothetical protein YP_109349.1 3293892 R 272560 CDS YP_109350.1 53720364 3091711 complement(3294488..3295273) 1 NC_006350.1 Weakly similar to Ralstonia solanacearum probable transmembrane protein rsc0726 or rs05127 SWALL:Q8Y1G4 (EMBL:AL646060) (328 aa) fasta scores: E(): 0.0054, 32.7% id in 263 aa, and to Xylella fastidiosa hypothetical protein xf0030 SWALL:Q9PHB4 (EMBL:AE003857) (316 aa) fasta scores: E(): 0.068, 25.17% id in 282 aa; hypothetical protein 3295273 3091711 BPSL2754 Burkholderia pseudomallei K96243 hypothetical protein YP_109350.1 3294488 R 272560 CDS YP_109351.1 53720365 3091712 complement(3295270..3295695) 1 NC_006350.1 hypothetical protein 3295695 3091712 BPSL2755 Burkholderia pseudomallei K96243 hypothetical protein YP_109351.1 3295270 R 272560 CDS YP_109352.1 53720366 3094396 complement(3295677..3296237) 1 NC_006350.1 Similar to Xanthomonas campestris pre-pilin like leader sequence FimT or xcc2495 SWALL:AAM41769 (EMBL:AE012361) (171 aa) fasta scores: E(): 6.6e-05, 30.76% id in 169 aa; hypothetical protein 3296237 3094396 BPSL2756 Burkholderia pseudomallei K96243 hypothetical protein YP_109352.1 3295677 R 272560 CDS YP_109353.1 53720367 3094397 complement(3296423..3296902) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0728 or rs05125 SWALL:Q8Y1G2 (EMBL:AL646060) (149 aa) fasta scores: E(): 6.9e-38, 65.1% id in 149 aa, and to Xanthomonas axonopodis hypothetical protein Xac0744 SWALL:AAM35633 (EMBL:AE011704) (174 aa) fasta scores: E(): 4.4e-32, 59.21% id in 152 aa, and to Xanthomonas campestris hypothetical protein Xcc0691 SWALL:AAM40007 (EMBL:AE012168) (174 aa) fasta scores: E(): 8e-32, 58.55% id in 152 aa; transcriptional regulator NrdR 3296902 nrdR 3094397 nrdR Burkholderia pseudomallei K96243 transcriptional regulator NrdR YP_109353.1 3296423 R 272560 CDS YP_109354.1 53720368 3094757 complement(3296909..3298156) 1 NC_006350.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3298156 glyA 3094757 glyA Burkholderia pseudomallei K96243 serine hydroxymethyltransferase YP_109354.1 3296909 R 272560 CDS YP_109355.1 53720369 3091464 3298608..3299354 1 NC_006350.1 Similar to Streptomyces clavuligerus clavaldehyde dehydrogenase Cad SWALL:Q9LCV7 (EMBL:U87786) (247 aa) fasta scores: E(): 1.1e-22, 36.66% id in 240 aa, and to Ralstonia solanacearum probable oxidoreductase rsc0730 or rs05123 SWALL:Q8Y1G0 (EMBL:AL646060) (262 aa) fasta scores: E(): 9.5e-65, 69.23% id in 247 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical oxidoreductase YdfG or stm1511 or sty1550 SWALL:YDFG_SALTY (SWALL:P40864) (248 aa) fasta scores: E(): 3.8e-64, 68.42% id in 247 aa; short-chain dehydrogenase 3299354 3091464 BPSL2759 Burkholderia pseudomallei K96243 short-chain dehydrogenase YP_109355.1 3298608 D 272560 CDS YP_109356.1 53720370 3091465 3299451..3299945 1 NC_006350.1 Similar to Ralstonia solanacearum thioesterase rsc0731 or rs05122 SWALL:Q8Y1F9 (EMBL:AL646060) (134 aa) fasta scores: E(): 2.1e-35, 66.4% id in 128 aa, and to Xanthomonas campestris hypothetical protein Xcc3022 SWALL:AAM42293 (EMBL:AE012415) (152 aa) fasta scores: E(): 4.1e-22, 47.01% id in 134 aa, and to Xanthomonas axonopodis hypothetical protein Xac3146 SWALL:AAM37990 (EMBL:AE011958) (152 aa) fasta scores: E(): 6.6e-22, 45.65% id in 138 aa; thioesterase 3299945 3091465 BPSL2760 Burkholderia pseudomallei K96243 thioesterase YP_109356.1 3299451 D 272560 CDS YP_109357.1 53720371 3093135 3300011..3300799 1 NC_006350.1 Similar to Pseudomonas aeruginosa protein TolQ or pa0969 SWALL:TOLQ_PSEAE (SWALL:P50598) (231 aa) fasta scores: E(): 4.9e-40, 52.23% id in 224 aa, and to Ralstonia solanacearum probable tolq-related transport transmembrane protein TolQ or rsc0732 or rs05121 SWALL:Q8Y1F8 (EMBL:AL646060) (230 aa) fasta scores: E(): 3.5e-65, 77.09% id in 227 aa; possible alternative start site at codon 38; TolQ transport transmembrane protein 3300799 tolQ 3093135 tolQ Burkholderia pseudomallei K96243 TolQ transport transmembrane protein YP_109357.1 3300011 D 272560 CDS YP_109358.1 53720372 3092856 3300810..3301259 1 NC_006350.1 Similar to Pseudomonas aeruginosa protein TolR or pa0970 SWALL:TOLR_PSEAE (SWALL:P50599) (146 aa) fasta scores: E(): 3.7e-11, 38.4% id in 138 aa, and to Ralstonia solanacearum tolr-related transport transmembrane protein TolR or rsc0733 or rs05120 SWALL:Q8Y1F7 (EMBL:AL646060) (144 aa) fasta scores: E(): 1.4e-28, 63.3% id in 139 aa, and to Xanthomonas axonopodis TolR protein tolr or xac3144 SWALL:AAM37988 (EMBL:AE011958) (149 aa) fasta scores: E(): 4.4e-12, 43.38% id in 136 aa; possible alternative start site at codon 10; TolR-like protein 3301259 tolR 3092856 tolR Burkholderia pseudomallei K96243 TolR-like protein YP_109358.1 3300810 D 272560 CDS YP_109359.1 53720373 3094704 3301256..3302281 1 NC_006350.1 Similar to Pseudomonas aeruginosa TolA protein TolA or pa0971 SWALL:TOLA_PSEAE (SWALL:P50600) (347 aa) fasta scores: E(): 0.00074, 30.72% id in 319 aa, and to Ralstonia solanacearum probable TolA-related transport transmembrane protein TolA or rsc0734 or rs05119 SWALL:Q8Y1F6 (EMBL:AL646060) (345 aa) fasta scores: E(): 1.1e-22, 45.56% id in 338 aa, and to Xanthomonas campestris TolA protein TolA or xcc3019 SWALL:Q8P6F1 (EMBL:AE012415) (345 aa) fasta scores: E(): 1.4e-05, 26.95% id in 345 aa; TolA-related transport transmembrane protein 3302281 tolA 3094704 tolA Burkholderia pseudomallei K96243 TolA-related transport transmembrane protein YP_109359.1 3301256 D 272560 CDS YP_109360.1 53720374 3093134 3302378..3303679 1 NC_006350.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3303679 tolB 3093134 tolB Burkholderia pseudomallei K96243 translocation protein TolB YP_109360.1 3302378 D 272560 CDS YP_109361.1 53720375 3094378 3303697..3304209 1 NC_006350.1 Similar to Pseudomonas putida peptidoglycan-associated lipoprotein precursor Pal or Pal1 SWALL:PAL_PSEPU (SWALL:P43036) (166 aa) fasta scores: E(): 2.8e-17, 44.02% id in 159 aa, and to Ralstonia solanacearum probable peptidoglycan-associated lipoprotein precursor Pal or rsc0736 or rs05117 SWALL:Q8Y1F4 (EMBL:AL646060) (172 aa) fasta scores: E(): 5.7e-37, 68.07% id in 166 aa, and to Xylella fastidiosa outer membrane protein p6 precursor xf1896 SWALL:Q9PC85 (EMBL:AE004009) (186 aa) fasta scores: E(): 2.7e-18, 39.2% id in 176 aa; OmpA family lipoprotein 3304209 3094378 BPSL2765 Burkholderia pseudomallei K96243 OmpA family lipoprotein YP_109361.1 3303697 D 272560 CDS YP_109362.1 53720376 3094379 3304229..3304978 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0737 or rs05116 SWALL:Q8Y1F3 (EMBL:AL646060) (274 aa) fasta scores: E(): 5.9e-45, 53.3% id in 242 aa, and to Xanthomonas campestris hypothetical protein Xcc3016 SWALL:AAM42287 (EMBL:AE012414) (272 aa) fasta scores: E(): 5.5e-14, 32.84% id in 274 aa, and to Xanthomonas axonopodis hypothetical protein Xac3140 SWALL:AAM37984 (EMBL:AE011958) (272 aa) fasta scores: E(): 9.5e-14, 33.57% id in 274 aa; hypothetical protein 3304978 3094379 BPSL2766 Burkholderia pseudomallei K96243 hypothetical protein YP_109362.1 3304229 D 272560 CDS YP_109363.1 53720377 3094216 complement(3306246..3306473) 1 NC_006350.1 hypothetical protein 3306473 3094216 BPSL2768 Burkholderia pseudomallei K96243 hypothetical protein YP_109363.1 3306246 R 272560 CDS YP_109364.1 53720378 3094217 3306699..3307583 1 NC_006350.1 Similar to Xanthomonas campestris UDP-glucose pyrophosphorylase SWALL:P74969 (EMBL:U65532) (324 aa) fasta scores: E(): 5.2e-57, 57.72% id in 272 aa, and to previously sequenced Burkholderia pseudomallei UTP-glucose-1-phosphate uridylyltransferase SWALL:Q9F5N4 (EMBL:AF312223) (295 aa) fasta scores: E(): 9.6e-91, 78.15% id in 293 aa, and to Ralstonia solanacearum probable UTP-glucose-1-phosphate uridylyltransferase GalU1 or rsc2237 or rs01362 SWALL:Q8XX79 (EMBL:AL646069) (289 aa) fasta scores: E(): 2.3e-90, 77.16% id in 289 aa; UTP-glucose-1-phosphate uridylyltransferase 3307583 3094217 BPSL2769 Burkholderia pseudomallei K96243 UTP-glucose-1-phosphate uridylyltransferase YP_109364.1 3306699 D 272560 CDS YP_109365.1 53720379 3094235 complement(3307838..3308833) 1 NC_006350.1 Similar to Escherichia coli polysialic acid capsule expression protein KpsF SWALL:KSF5_ECOLI (SWALL:Q47334) (327 aa) fasta scores: E(): 3.5e-43, 43.61% id in 321 aa, and to Haemophilus influenzae hypothetical protein HI1678 SWALL:YRBH_HAEIN (SWALL:P45313) (337 aa) fasta scores: E(): 3e-51, 49.68% id in 320 aa; capsule expression protein 3308833 3094235 BPSL2770 Burkholderia pseudomallei K96243 capsule expression protein YP_109365.1 3307838 R 272560 CDS YP_109366.1 53720380 3094236 complement(3308877..3309428) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0412 or rs03380 SWALL:Q8Y2C4 (EMBL:AL646059) (195 aa) fasta scores: E(): 5.2e-21, 46.34% id in 164 aa, and to Neisseria meningitidis hypothetical protein Nmb0353 SWALL:Q9K137 (EMBL:AE002392) (178 aa) fasta scores: E(): 2.3e-19, 39.24% id in 158 aa, and to Neisseria meningitidis hypothetical protein Nma2134 SWALL:Q9JSU3 (EMBL:AL162758) (178 aa) fasta scores: E(): 2.7e-19, 39.24% id in 158 aa; haloacid dehalogenase-like hydrolase 3309428 3094236 BPSL2771 Burkholderia pseudomallei K96243 haloacid dehalogenase-like hydrolase YP_109366.1 3308877 R 272560 CDS YP_109367.1 53720381 3093882 complement(3309425..3310270) 1 NC_006350.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3310270 kdsA 3093882 kdsA Burkholderia pseudomallei K96243 2-dehydro-3-deoxyphosphooctonate aldolase YP_109367.1 3309425 R 272560 CDS YP_109368.1 53720382 3091440 complement(3310355..3311515) 1 NC_006350.1 Similar to Klebsiella pneumoniae glycosyltransferase in cps region SWALL:YC07_KLEPN (SWALL:Q48453) (358 aa) fasta scores: E(): 2e-08, 26.48% id in 370 aa, and to Lactobacillus delbrueckii glycosyltransferase EpsF SWALL:Q9F0C2 (EMBL:AF267127) (366 aa) fasta scores: E(): 9e-28, 30.63% id in 346 aa, and to Escherichia coli galactosyltransferase WbgM SWALL:Q8VQ50 (EMBL:AF461121) (364 aa) fasta scores: E(): 1.7e-12, 27.36% id in 296 aa; possible alternative start site at codon 27; glycosyltransferase 3311515 3091440 BPSL2773 Burkholderia pseudomallei K96243 glycosyltransferase YP_109368.1 3310355 R 272560 CDS YP_109369.1 53720383 3091441 complement(3311512..3312456) 1 NC_006350.1 hypothetical protein 3312456 3091441 BPSL2774 Burkholderia pseudomallei K96243 hypothetical protein YP_109369.1 3311512 R 272560 CDS YP_109370.1 53720384 3092188 complement(3312453..3312989) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 colanic acid biosynthesis acetyltransferase WcaB or b2058 or z3222 or ecs2863 SWALL:WCAB_ECOLI (SWALL:P77558) (162 aa) fasta scores: E(): 4.6e-15, 38.36% id in 159 aa, and to Salmonella typhimurium acetyl transferase WcaB or stm2114 SWALL:Q9F7A9 (EMBL:AF285084) (162 aa) fasta scores: E(): 7.4e-16, 40% id in 160 aa, and to Salmonella typhi acetyltransferase sty2327 SWALL:Q8Z5G7 (EMBL:AL627273) (162 aa) fasta scores: E(): 1.2e-15, 40% id in 160 aa; colanic acid biosynthesis acetyltransferase 3312989 3092188 BPSL2775 Burkholderia pseudomallei K96243 colanic acid biosynthesis acetyltransferase YP_109370.1 3312453 R 272560 CDS YP_109371.1 53720385 3092189 complement(3312991..3314187) 1 NC_006350.1 No significant database matches to the full length CDS. Internal region is similar to an internal region of Escherichia coli capsule polysaccharide export protein KpsS SWALL:KSS5_ECOLI (SWALL:P42218) (389 aa) fasta scores: E(): 0.0021, 29.75% id in 242 aa; Similar to Rhizobium sp. protein FixF or y4gK from codon 220 to 395 SWALL:FIXF_RHISN (SWALL:P55467) (402 aa) fasta scores: E(): 7.6e-06, 39.28% id in 112 aa; hypothetical protein 3314187 3092189 BPSL2776 Burkholderia pseudomallei K96243 hypothetical protein YP_109371.1 3312991 R 272560 CDS YP_109372.1 53720386 3093783 complement(3314220..3315494) 1 NC_006350.1 Similar to Pseudomonas aeruginosa O-antigen translocase Orf_11 SWALL:AAM27663 (EMBL:AF498408) (411 aa) fasta scores: E(): 2.5e-13, 24.69% id in 413 aa, and to Pseudomonas aeruginosa protein WbpF or Wzx or pa3153 SWALL:P72137 (EMBL:U50396) (411 aa) fasta scores: E(): 4.4e-13, 24.69% id in 413 aa, and to Rhizobium loti O-antigen translocase homolog mlr9725 SWALL:Q98NV4 (EMBL:AP003017) (449 aa) fasta scores: E(): 1.7e-11, 27.57% id in 417 aa; O-antigen translocase 3315494 3093783 BPSL2777 Burkholderia pseudomallei K96243 O-antigen translocase YP_109372.1 3314220 R 272560 CDS YP_109373.1 53720387 3093784 complement(3315555..3317795) 1 NC_006350.1 Similar to Acinetobacter johnsonii tyrosine-protein kinase Ptk SWALL:PTK_ACIJO (SWALL:O52788) (733 aa) fasta scores: E(): 1.3e-70, 34.27% id in 741 aa, and to Ralstonia solanacearum tyrosine-protein kinase EpsB SWALL:EPB2_RALSO (SWALL:Q45409) (750 aa) fasta scores: E(): 1.4e-132, 53.65% id in 738 aa, and to Ralstonia solanacearum tyrosine-protein kinase EpsB or rsp1018 or rs02356 SWALL:EPB1_RALSO (SWALL:P58593) (751 aa) fasta scores: E(): 1.4e-132, 53.77% id in 742 aa; tyrosine-protein kinase involved in EPS biosynthesis 3317795 3093784 BPSL2778 Burkholderia pseudomallei K96243 tyrosine-protein kinase involved in EPS biosynthesis YP_109373.1 3315555 R 272560 CDS YP_109374.1 53720388 3094032 complement(3317837..3318271) 1 NC_006350.1 Similar to Acinetobacter johnsonii low molecular weight protein-tyrosine-phosphatase Ptp SWALL:PTP_ACIJO (SWALL:O52787) (142 aa) fasta scores: E(): 2.5e-16, 36.69% id in 139 aa, and to Ralstonia solanacearum probable low molecular weight protein-tyrosine-phosphatase EpsP or rsp1019 or rs02353 SWALL:EPP1_RALSO (SWALL:P58596) (145 aa) fasta scores: E(): 1.6e-25, 50.7% id in 142 aa, and to Ralstonia solanacearum probable low molecular weight protein-tyrosine-phosphatase EpsP SWALL:EPP2_RALSO (SWALL:Q45408) (145 aa) fasta scores: E(): 1.6e-25, 51.4% id in 142 aa. Note: may be involved in EPS biosynthesis; protein-tyrosine-phosphatase 3318271 3094032 BPSL2779 Burkholderia pseudomallei K96243 protein-tyrosine-phosphatase YP_109374.1 3317837 R 272560 CDS YP_109375.1 53720389 3094033 complement(3318268..3319470) 1 NC_006350.1 Similar to Vibrio vulnificus capsular polysaccharide transport protein Wza SWALL:Q938A5 (EMBL:AY055488) (378 aa) fasta scores: E(): 1.4e-34, 40.98% id in 305 aa, and to Ralstonia solanacearum EPS I polysaccharide export outer membrane protein EpsA precursor SWALL:EPA2_RALSO (SWALL:Q45407) (377 aa) fasta scores: E(): 9.2e-49, 42.59% id in 385 aa, and to Ralstonia solanacearum EPS I polysaccharide export outer membrane protein EpsA precursor or rsp1020 or rs02354 SWALL:EPA1_RALSO (SWALL:P58597) (381 aa) fasta scores: E(): 3.1e-48, 43.04% id in 388 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site; capsular polysaccharide transport protein 3319470 3094033 BPSL2780 Burkholderia pseudomallei K96243 capsular polysaccharide transport protein YP_109375.1 3318268 R 272560 CDS YP_109376.1 53720390 3092831 complement(3319533..3320654) 1 NC_006350.1 Similar to Erwinia amylovora UDP-galactose-lipid carrier transferase AmsG SWALL:AMSG_ERWAM (SWALL:Q46628) (477 aa) fasta scores: E(): 1e-49, 62.21% id in 217 aa, and to Erwinia pyrifoliae sugar transferase CpsG from codon 162 to 374 SWALL:Q8VVI1 (EMBL:AJ300463) (477 aa) fasta scores: E(): 3e-50, 62.67% id in 217 aa, and to Erwinia stewartii undecaprenyl-phosphate galactose phosphotransferase homolog CpsA from codon 175 to 374 SWALL:O85804 (EMBL:AF077292) (476 aa) fasta scores: E(): 6.4e-50, 66% id in 200 aa; transmembrane sugar transferase 3320654 3092831 BPSL2781 Burkholderia pseudomallei K96243 transmembrane sugar transferase YP_109376.1 3319533 R 272560 CDS YP_109377.1 53720391 3092832 complement(3320835..3321881) 1 NC_006350.1 Similar to Mycobacterium smegmatis AdpA-like protein SWALL:Q9KX52 (EMBL:U20115) (308 aa) fasta scores: E(): 1.3e-11, 31.08% id in 222 aa, and to Caulobacter crescentus transcriptional regulator, AraC family cc3367 SWALL:Q9A339 (EMBL:AE005998) (324 aa) fasta scores: E(): 3.9e-09, 29.81% id in 322 aa, and to Streptomyces coelicolor transcriptional regulator sco2329 or scc53.20C SWALL:Q9KXJ1 (EMBL:AL357591) (320 aa) fasta scores: E(): 4.5e-09, 29.44% id in 326 aa; AraC family transcriptional regulator 3321881 3092832 BPSL2782 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_109377.1 3320835 R 272560 CDS YP_109378.1 53720392 3093509 3322670..3323242 1 NC_006350.1 Similar to Klebsiella pneumoniae hypothetical protein in cps region SWALL:YC02_KLEPN (SWALL:Q48448) (209 aa) fasta scores: E(): 1.7e-10, 31.86% id in 182 aa, and to Ralstonia solanacearum probable transmembrane protein rsp1005 or rs02338 SWALL:Q8XR56 (EMBL:AL646082) (223 aa) fasta scores: E(): 3.1e-10, 34.4% id in 186 aa, and to Aeromonas hydrophila hypothetical 28.2 kDa protein SWALL:Q9X647 (EMBL:AF131869) (264 aa) fasta scores: E(): 5.5e-10, 37.68% id in 207 aa; hypothetical protein 3323242 3093509 BPSL2783 Burkholderia pseudomallei K96243 hypothetical protein YP_109378.1 3322670 D 272560 CDS YP_109379.1 53720393 3093510 3323439..3324797 1 NC_006350.1 No significant database matches. Possible alternative translational start site; hypothetical protein 3324797 3093510 BPSL2784 Burkholderia pseudomallei K96243 hypothetical protein YP_109379.1 3323439 D 272560 CDS YP_109380.1 53720394 3093327 3324839..3326011 1 NC_006350.1 hypothetical protein 3326011 3093327 BPSL2785 Burkholderia pseudomallei K96243 hypothetical protein YP_109380.1 3324839 D 272560 CDS YP_109381.1 53720395 3093328 complement(3326472..3327170) 1 NC_006350.1 acetyltransferase 3327170 3093328 BPSL2786 Burkholderia pseudomallei K96243 acetyltransferase YP_109381.1 3326472 R 272560 CDS YP_109382.1 53720396 3091459 complement(3327179..3328498) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 from codon 59 2-amino-3-ketobutyrate coenzyme A ligase Kbl or b3617 or z5044 or ecs4495 SWALL:KBL_ECOLI (SWALL:P07912) (398 aa) fasta scores: E(): 3.4e-37, 35.59% id in 354 aa. Identical to Burkholderia mallei acyl-CoA transferase WcbT SWALL:Q9AI28 (EMBL:AF285636) (439 aa) fasta scores: E(): 1e-164, 100% id in 439 aa; acyl-CoA transferase 3328498 wcbT 3091459 wcbT Burkholderia pseudomallei K96243 acyl-CoA transferase YP_109382.1 3327179 R 272560 CDS YP_109383.1 53720397 3091458 complement(3328563..3329480) 1 NC_006350.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3329480 wcbS 3091458 wcbS Burkholderia pseudomallei K96243 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_109383.1 3328563 R 272560 CDS YP_109384.1 53720398 3092850 complement(3329477..3337117) 1 NC_006350.1 Similar to previously sequenced Burkholderia mallei type I polyketide synthase WcbR SWALL:Q9AI30 (EMBL:AF285636) (2546 aa) fasta scores: E(): 0, 99.64% id in 2546 aa, and to Rhizobium meliloti fatty acid synthase transmembrane protein RkpA or r00577 or smc02273 SWALL:Q92S51 (EMBL:AL591784) (2504 aa) fasta scores: E(): 1e-168, 36.88% id in 2592 aa, and to Stigmatella aurantiaca StiG protein SWALL:Q8RJY0 (EMBL:AJ421825) (1398 aa) fasta scores: E(): 7.7e-134, 39.09% id in 1279 aa; capsular polysaccharide biosynthesis fatty acid synthase 3337117 wcbR 3092850 wcbR Burkholderia pseudomallei K96243 capsular polysaccharide biosynthesis fatty acid synthase YP_109384.1 3329477 R 272560 CDS YP_109385.1 53720399 3092101 complement(3337120..3338652) 1 NC_006350.1 Similar to Rhizobium meliloti capsular polysaccharide biosynthesis protein from codon 21 RkpI or r00574 or smc02270 SWALL:RKPI_RHIME (SWALL:Q52938) (538 aa) fasta scores: E(): 1.8e-15, 30% id in 470 aa, and to Burkholderia mallei capsular polysaccharide biosynthesis protein WcbQ SWALL:Q9AI31 (EMBL:AF285636) (511 aa) fasta scores: E(): 2.9e-197, 95.89% id in 511 aa, and to Agrobacterium tumefaciens hypothetical protein atu1658 or agr_c_3053 SWALL:Q8UEU6 (EMBL:AE009122) (646 aa) fasta scores: E(): 2.4e-20, 27.36% id in 486 aa; capsular polysaccharide biosynthesis transmembrane protein 3338652 wcbQ 3092101 wcbQ Burkholderia pseudomallei K96243 capsular polysaccharide biosynthesis transmembrane protein YP_109385.1 3337120 R 272560 CDS YP_109386.1 53720400 3092100 complement(3338654..3339442) 1 NC_006350.1 Similar to Burkholderia mallei dehydrogenase/reductase WcbP SWALL:Q9AI32 (EMBL:AF285636) (262 aa) fasta scores: E(): 1.1e-97, 99.23% id in 262 aa, and to Dictyostelium discoideum oxidoreductase SWALL:AAM43748 (EMBL:AC116989) (342 aa) fasta scores: E(): 7.9e-24, 36.4% id in 250 aa, and to Dictyostelium discoideum hypothetical protein SWALL:AAM43743 (EMBL:AC116989) (344 aa) fasta scores: E(): 9.2e-24, 36.26% id in 262 aa; capsular polysaccharide biosynthesis dehydrogenase/reductase 3339442 wcbP 3092100 wcbP Burkholderia pseudomallei K96243 capsular polysaccharide biosynthesis dehydrogenase/reductase YP_109386.1 3338654 R 272560 CDS YP_109387.1 53720401 3092365 complement(3339439..3340641) 1 NC_006350.1 Similar to Escherichia coli capsule polysaccharide export protein KpsS SWALL:KSS5_ECOLI (SWALL:P42218) (389 aa) fasta scores: E(): 2.7e-47, 37.46% id in 379 aa, and to Burkholderia mallei capsule polysaccharide biosynthesis/export protein WcbO SWALL:Q9AI33 (EMBL:AF285636) (400 aa) fasta scores: E(): 1.3e-171, 99.75% id in 400 aa, and to Rhizobium meliloti capsular polysaccharide biosynthesis/export protein RkpJ or r00573 or smc02269 SWALL:Q92S54 (EMBL:AL591784) (441 aa) fasta scores: E(): 1.5e-48, 36.77% id in 397 aa; capsule polysaccharide biosynthesis/export protein 3340641 wcbO 3092365 wcbO Burkholderia pseudomallei K96243 capsule polysaccharide biosynthesis/export protein YP_109387.1 3339439 R 272560 CDS YP_109388.1 53720402 3091825 complement(3340908..3341477) 1 NC_006350.1 Similar to Aneurinibacillus thermoaerophilus D-glycero-d-manno-heptose 1,7-bisphosphate phosphatase GmhC SWALL:Q9AGY5 (EMBL:AF324836) (179 aa) fasta scores: E(): 3.6e-35, 60% id in 155 aa. Identical to Burkholderia mallei WcbN protein SWALL:Q9AI34 (EMBL:AF285636) (189 aa) fasta scores: E(): 9.5e-78, 100% id in 189 aa; D-glycero-d-manno-heptose 1,7-bisphosphate phosphatase 3341477 wcbN 3091825 wcbN Burkholderia pseudomallei K96243 D-glycero-d-manno-heptose 1,7-bisphosphate phosphatase YP_109388.1 3340908 R 272560 CDS YP_109389.1 53720403 3091824 complement(3341474..3342166) 1 NC_006350.1 Similar to Aneurinibacillus thermoaerophilus D-glycero-d-manno-heptose 1-phosphate guanosyltransferase GmhD SWALL:Q9AGY6 (EMBL:AF324836) (230 aa) fasta scores: E(): 4.6e-29, 39.55% id in 225 aa. Previously sequenced Burkholderia pseudomallei capsular polysaccharide biosynthesis protein WcbM SWALL:Q93UJ1 (EMBL:AF228583) (230 aa) fasta scores: E(): 5e-89, 99.56% id in 230 aa; D-glycero-d-manno-heptose 1-phosphate guanosyltransferase 3342166 wcbM 3091824 wcbM Burkholderia pseudomallei K96243 D-glycero-d-manno-heptose 1-phosphate guanosyltransferase YP_109389.1 3341474 R 272560 CDS YP_109390.1 53720404 3092932 complement(3342168..3342761) 1 NC_006350.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 3342761 gmhA 3092932 gmhA Burkholderia pseudomallei K96243 phosphoheptose isomerase YP_109390.1 3342168 R 272560 CDS YP_109391.1 53720405 3092914 complement(3342743..3343783) 1 NC_006350.1 Similar to Aneurinibacillus thermoaerophilus D-glycero-d-manno-heptose 7-phosphate kinase GmhB SWALL:Q9AGY8 (EMBL:AF324836) (341 aa) fasta scores: E(): 1.6e-79, 55.84% id in 342 aa. Previously sequenced Burkholderia pseudomallei sugar kinase WcbL SWALL:Q93UJ3 (EMBL:AF228583) (346 aa) fasta scores: E(): 5.3e-139, 100% id in 346 aa; sugar kinase 3343783 wcbL 3092914 wcbL Burkholderia pseudomallei K96243 sugar kinase YP_109391.1 3342743 R 272560 CDS YP_109392.1 53720406 3094198 complement(3343799..3344812) 1 NC_006350.1 Similar to Aneurinibacillus thermoaerophilus GDP-6-deoxy-D-lyxo-4-hexulose reductase Rmd SWALL:Q9EYP5 (EMBL:AF317224) (309 aa) fasta scores: E(): 4.3e-31, 35.4% id in 322 aa. Identical to Burkholderia mallei GDP epimerase/dehydratase WcbK SWALL:Q9AI38 (EMBL:AF285636) (337 aa) fasta scores: E(): 1.2e-132, 100% id in 337 aa; GDP sugar epimerase/dehydratase 3344812 wcbK 3094198 wcbK Burkholderia pseudomallei K96243 GDP sugar epimerase/dehydratase YP_109392.1 3343799 R 272560 CDS YP_109393.1 53720407 3094197 complement(3344822..3345664) 1 NC_006350.1 Similar to Azorhizobium caulinodans capsular polysaccharide biosynthesis protein Oac2 SWALL:Q06936 (EMBL:Z22611) (296 aa) fasta scores: E(): 1.7e-06, 27.13% id in 199 aa. Identical to Burkholderia mallei capsular polysaccharide biosynthesis protein WcbJ SWALL:Q9AI39 (EMBL:AF285636) (280 aa) fasta scores: E(): 1.2e-109, 100% id in 280 aa; capsular polysaccharide biosynthesis protein 3345664 wcbJ 3094197 wcbJ Burkholderia pseudomallei K96243 capsular polysaccharide biosynthesis protein YP_109393.1 3344822 R 272560 CDS YP_109394.1 53720408 3091460 complement(3345661..3346599) 1 NC_006350.1 Similar to Burkholderia mallei capsular polysaccharide biosynthesis protein WcbI SWALL:Q9AI40 (EMBL:AF285636) (311 aa) fasta scores: E(): 1.4e-128, 99.67% id in 311 aa, and to previously sequenced Burkholderia pseudomallei capsular polysaccharide biosynthesis protein WcbI SWALL:Q93UJ4 (EMBL:AF228583) (395 aa) fasta scores: E(): 2.7e-128, 99.03% id in 312 aa; capsular polysaccharide biosynthesis protein 3346599 wcbI 3091460 wcbI Burkholderia pseudomallei K96243 capsular polysaccharide biosynthesis protein YP_109394.1 3345661 R 272560 CDS YP_109395.1 53720409 3093854 complement(3346614..3348410) 1 NC_006350.1 Similar to Caulobacter crescentus glycosyl transferase, group 1 family protein cc1003 or WbqX SWALL:Q9A9H7 (EMBL:AE005778) (434 aa) fasta scores: E(): 3e-10, 27.02% id in 433 aa. Previously sequenced Burkholderia pseudomallei glycosyltransferase WcbH SWALL:Q93UJ5 (EMBL:AF228583) (598 aa) fasta scores: E(): 0, 99.66% id in 598 aa; glycosyl transferase 3348410 wcbH 3093854 wcbH Burkholderia pseudomallei K96243 glycosyl transferase YP_109395.1 3346614 R 272560 CDS YP_109396.1 53720410 3093853 complement(3348407..3349348) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei capsular polysaccharide biosynthesis protein WcbG SWALL:Q93UJ6 (EMBL:AF228583) (313 aa) fasta scores: E(): 1e-116, 100% id in 313 aa. Highly similar to Burkholderia mallei capsular polysaccharide biosynthesis protein WcbG SWALL:Q9AI42 (EMBL:AF285636) (313 aa) fasta scores: E(): 9e-116, 99.04% id in 313 aa; capsular polysaccharide biosynthesis protein 3349348 wcbG 3093853 wcbG Burkholderia pseudomallei K96243 capsular polysaccharide biosynthesis protein YP_109396.1 3348407 R 272560 CDS YP_109397.1 53720411 3093224 complement(3349358..3350680) 1 NC_006350.1 Previously sequenced Burkholderia pseudomallei capsule polysaccharide biosynthesis protein WcbF SWALL:Q93UJ7 (EMBL:AF228583) (459 aa) fasta scores: E(): 8e-185, 100% id in 440 aa. Highly similar to Burkholderia mallei capsule polysaccharide biosynthesis protein WcbF SWALL:Q9AI43 (EMBL:AF285636) (440 aa) fasta scores: E(): 4e-184, 99.77% id in 440 aa; capsule polysaccharide biosynthesis protein 3350680 wcbF 3093224 wcbF Burkholderia pseudomallei K96243 capsule polysaccharide biosynthesis protein YP_109397.1 3349358 R 272560 CDS YP_109398.1 53720412 3093223 complement(3350703..3352226) 1 NC_006350.1 Similar to Pseudomonas aeruginosa glycosyltransferase WbpX or pa5449 SWALL:O84908 (EMBL:AF010181) (460 aa) fasta scores: E(): 1e-09, 34.83% id in 155 aa, and to previously sequenced Burkholderia pseudomallei glycosyltransferase WcbE SWALL:Q93UJ8 (EMBL:AF228583) (507 aa) fasta scores: E(): 1e-206, 99.8% id in 507 aa, and to Burkholderia mallei glycosyltransferase WcbE SWALL:Q9AI44 (EMBL:AF285636) (507 aa) fasta scores: E(): 7.2e-206, 99.8% id in 507 aa, and to Actinobacillus actinomycetemcomitans glycosyltransferase SWALL:Q9JRN4 (EMBL:AB046360) (390 aa) fasta scores: E(): 4.8e-10, 34.53% id in 139 aa; glycosyltransferase 3352226 wcbE 3093223 wcbE Burkholderia pseudomallei K96243 glycosyltransferase YP_109398.1 3350703 R 272560 CDS YP_109399.1 53720413 3093190 complement(3352259..3352915) 1 NC_006350.1 Similar to Haemophilus influenzae ATP-binding protein BexA SWALL:BEXA_HAEIN (SWALL:P10640) (217 aa) fasta scores: E(): 2.7e-42, 58.98% id in 217 aa. Highly similar to Burkholderia mallei ABC-2 transporter Wzt SWALL:Q9AI45 (EMBL:AF285636) (218 aa) fasta scores: E(): 5.1e-73, 100% id in 218 aa. Previously as sequenced Burkholderia pseudomallei ATP-binding protein Wzt2 SWALL:Q93UJ9 (EMBL:AF228583) (248 aa) fasta scores: E(): 3.3e-70, 99.05% id in 211 aa; ATP-binding ABC transporter capsular polysaccharide export protein 3352915 wzt2 3093190 wzt2 Burkholderia pseudomallei K96243 ATP-binding ABC transporter capsular polysaccharide export protein YP_109399.1 3352259 R 272560 CDS YP_109400.1 53720414 3093941 complement(3352912..3353694) 1 NC_006350.1 Similar to Haemophilus influenzae capsule polysaccharide export inner-membrane protein BexB bexB SWALL:BXB2_HAEIN (SWALL:P19391) (265 aa) fasta scores: E(): 1.8e-44, 42.47% id in 259 aa. Identical to Burkholderia mallei ABC-2 transporter Wzm SWALL:Q9AI46 (EMBL:AF285636) (260 aa) fasta scores: E(): 6.2e-105, 100% id in 260 aa; capsular polysaccharide export ABC transporter transmembrane protein 3353694 wzm 3093941 wzm Burkholderia pseudomallei K96243 capsular polysaccharide export ABC transporter transmembrane protein YP_109400.1 3352912 R 272560 CDS YP_109401.1 53720415 3094162 complement(3353701..3354849) 1 NC_006350.1 Similar to Haemophilus influenzae capsule polysaccharide export inner-membrane protein BexC SWALL:BEXC_HAEIN (SWALL:P22930) (377 aa) fasta scores: E(): 7.1e-55, 41.99% id in 381 aa. Identical to Burkholderia mallei capsule polysaccharide export inner-membrane protein WcbD SWALL:Q9AI47 (EMBL:AF285636) (382 aa) fasta scores: E(): 3.7e-135, 100% id in 382 aa; capsule polysaccharide export ABC transporter transmembrane protein 3354849 wcbD 3094162 wcbD Burkholderia pseudomallei K96243 capsule polysaccharide export ABC transporter transmembrane protein YP_109401.1 3353701 R 272560 CDS YP_109402.1 53720416 3093048 complement(3355330..3356493) 1 NC_006350.1 Similar to Actinobacillus pleuropneumoniae capsular polysaccharide biosynthesis/export protein CpxD precursor SWALL:Q44132 (EMBL:U36397) (394 aa) fasta scores: E(): 6.4e-52, 41.19% id in 386 aa, Identical to Burkholderia mallei capsular polysaccharide biosynthesis/export protein WcbC SWALL:Q9AI48 (EMBL:AF285636) (387 aa) fasta scores: E(): 5.8e-141, 100% id in 387 aa; capsular polysaccharide biosynthesis/export protein 3356493 wcbC 3093048 wcbC Burkholderia pseudomallei K96243 capsular polysaccharide biosynthesis/export protein YP_109402.1 3355330 R 272560 CDS YP_109403.1 53720417 3093047 3356674..3357825 1 NC_006350.1 Similar to Pseudomonas aeruginosa glycosyltransferase WbpX or pa5449 SWALL:O84908 (EMBL:AF010181) (460 aa) fasta scores: E(): 2.3e-16, 33.33% id in 267 aa, and to previously sequenced Burkholderia pseudomallei glycosyltransferase WcbB SWALL:Q93UK1 (EMBL:AF228583) (365 aa) fasta scores: E(): 7e-147, 98.88% id in 357 aa, and to Burkholderia mallei glycosyltransferase WcbB SWALL:Q9AI49 (EMBL:AF285636) (280 aa) fasta scores: E(): 2.8e-116, 99.64% id in 280 aa, and to Burkholderia thailandensis glycosyltransferase WcbB SWALL:Q9AI57 (EMBL:AF285634) (280 aa) fasta scores: E(): 1.2e-84, 72.76% id in 279 aa; capsular polysaccharide glycosyltransferase biosynthesis protein 3357825 wcbB 3093047 wcbB Burkholderia pseudomallei K96243 capsular polysaccharide glycosyltransferase biosynthesis protein YP_109403.1 3356674 D 272560 CDS YP_109404.1 53720418 3093175 3357826..3359841 1 NC_006350.1 Similar to Escherichia coli capsule polysaccharide export protein KpsC SWALL:KSC5_ECOLI (SWALL:P42217) (675 aa) fasta scores: E(): 4.4e-65, 35.75% id in 674 aa, and to Burkholderia mallei capsular polysaccharide export protein WcbA SWALL:Q9AI50 (EMBL:AF285636) (671 aa) fasta scores: E(): 0, 99.85% id in 671 aa, and to previously sequenced Burkholderia pseudomallei capsular polysaccharide export protein WcbA SWALL:Q93UK2 (EMBL:AF228583) (671 aa) fasta scores: E(): 0, 99.4% id in 671 aa, and to Burkholderia thailandensis capsular polysaccharide export protein WcbA SWALL:Q9AI58 (EMBL:AF285634) (676 aa) fasta scores: E(): 6.5e-152, 60.12% id in 637 aa; capsule polysaccharide export protein 3359841 wcbA 3093175 wcbA Burkholderia pseudomallei K96243 capsule polysaccharide export protein YP_109404.1 3357826 D 272560 CDS YP_109405.1 53720419 3093126 3360240..3361667 1 NC_006350.1 Similar to Escherichia coli GDP-mannose pyrophosphorylase ManC SWALL:Q9EXX9 (EMBL:AY012191) (479 aa) fasta scores: E(): 9.4e-105, 56.63% id in 475 aa. Previously sequenced Burkholderia pseudomallei ManC protein SWALL:Q93UK3 (EMBL:AF228583) (475 aa) fasta scores: E(): 5.3e-190, 100% id in 475 aa. Highly similar to Burkholderia mallei GDP-mannose pyrophosphorylase ManC SWALL:Q9AI51 (EMBL:AF285636) (475 aa) fasta scores: E(): 1.1e-189, 99.78% id in 475 aa, and to Burkholderia thailandensis GDP-mannose pyrophosphorylase ManC SWALL:Q9AI59 (EMBL:AF285634) (476 aa) fasta scores: E(): 1.1e-160, 82.7% id in 474 aa; GDP-mannose pyrophosphorylase 3361667 manC 3093126 manC Burkholderia pseudomallei K96243 GDP-mannose pyrophosphorylase YP_109405.1 3360240 D 272560 CDS YP_109406.1 53720420 3093359 3361929..3362774 1 NC_006350.1 Identical to Burkholderia mallei hypothetical protein YafJ SWALL:Q9AI52 (EMBL:AF285636) (278 aa) fasta scores: E(): 5e-119, 100% id in 278 aa. Similar to Streptomyces coelicolor hypothetical protein sco7508 or scbac17a6.41C SWALL:Q93J89 (EMBL:AL596248) (277 aa) fasta scores: E(): 4e-64, 55.63% id in 275 aa, and to Rhizobium meliloti hypothetical protein r00357 or smc01162 SWALL:Q92SL4 (EMBL:AL591783) (271 aa) fasta scores: E(): 1.3e-33, 41.85% id in 270 aa; hypothetical protein 3362774 3093359 BPSL2811 Burkholderia pseudomallei K96243 hypothetical protein YP_109406.1 3361929 D 272560 CDS YP_109407.1 53720421 3093715 3362840..3363712 1 NC_006350.1 Identical to Burkholderia mallei hypothetical protein YggB SWALL:Q9AI53 (EMBL:AF285636) (290 aa) fasta scores: E(): 1.6e-105, 100% id in 290 aa. Previously sequenced Burkholderia pseudomallei hypothetical protein YggB SWALL:Q93UK4 (EMBL:AF228583) (271 aa) fasta scores: E(): 4e-91, 95.57% id in 271 aa; hypothetical protein 3363712 3093715 BPSL2812 Burkholderia pseudomallei K96243 hypothetical protein YP_109407.1 3362840 D 272560 CDS YP_109408.1 53720422 3093716 complement(3364033..3364776) 1 NC_006350.1 Similar to Burkholderia mallei DedA family transmembrane protein SWALL:Q9AI54 (EMBL:AF285636) (226 aa) fasta scores: E(): 6.3e-85, 99.11% id in 226 aa, and to Ralstonia solanacearum probable DedA dsg-1 protein transmembrane DedA or rsc2559 or rs00742 SWALL:Q8XWB5 (EMBL:AL646070) (218 aa) fasta scores: E(): 5.6e-52, 63.42% id in 216 aa, and to Escherichia coli, and Escherichia coli O157:H7 DedA protein DedA or b2317 or z3579 or ecs3201 SWALL:DEDA_ECOLI (SWALL:P09548) (219 aa) fasta scores: E(): 1.2e-39, 47.98% id in 223 aa; possible alternative start site at codon 22; DedA family transmembrane protein 3364776 3093716 BPSL2813 Burkholderia pseudomallei K96243 DedA family transmembrane protein YP_109408.1 3364033 R 272560 CDS YP_109409.1 53720423 3094395 3364898..3366952 1 NC_006350.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 3366952 mutL 3094395 mutL Burkholderia pseudomallei K96243 DNA mismatch repair protein YP_109409.1 3364898 D 272560 CDS YP_109410.1 53720424 3091722 3366949..3367923 1 NC_006350.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 3367923 miaA 3091722 miaA Burkholderia pseudomallei K96243 tRNA delta(2)-isopentenylpyrophosphate transferase YP_109410.1 3366949 D 272560 CDS YP_109411.1 53720425 3093777 complement(3367941..3368342) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc3100 or rs00553 SWALL:Q8XUT5 (EMBL:AL646073) (131 aa) fasta scores: E(): 2.2e-19, 50.38% id in 131 aa; hypothetical protein 3368342 3093777 BPSL2816 Burkholderia pseudomallei K96243 hypothetical protein YP_109411.1 3367941 R 272560 CDS YP_109412.1 53720426 3093020 complement(3368578..3369798) 1 NC_006350.1 Similar to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 3.6e-138, 78.32% id in 406 aa, and to Burkholderia mallei transposase Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 3.8e-162, 99.22% id in 386 aa. CDS is extended at the N-terminus in comparison to the B. mallei protein; transposase 3369798 tnpA 3093020 tnpA Burkholderia pseudomallei K96243 transposase YP_109412.1 3368578 R 272560 CDS YP_109413.1 53720427 3092877 complement(3369943..3370998) 1 NC_006350.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3370998 purM 3092877 purM Burkholderia pseudomallei K96243 phosphoribosylaminoimidazole synthetase YP_109413.1 3369943 R 272560 CDS YP_109414.1 53720428 3093778 3371297..3372022 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2625 or rs00929 SWALL:Q8XW50 (EMBL:AL646071) (233 aa) fasta scores: E(): 2.9e-43, 53.04% id in 230 aa, and to Neisseria meningitidis dnaA-related protein nmb1076 SWALL:Q9JZF5 (EMBL:AE002458) (222 aa) fasta scores: E(): 6.8e-22, 37.22% id in 231 aa, and to Neisseria meningitidis hypothetical protein Nma1279 SWALL:Q9JUJ9 (EMBL:AL162755) (243 aa) fasta scores: E(): 7.3e-22, 37.22% id in 231 aa; DnaA regulatory inactivator Hda 3372022 3093778 BPSL2819 Burkholderia pseudomallei K96243 DnaA regulatory inactivator Hda YP_109414.1 3371297 D 272560 CDS YP_109415.1 53720429 3094665 3372044..3372730 1 NC_006350.1 Similar to Ralstonia solanacearum hydrolase rsc2626 or rs00930 SWALL:Q8XW49 (EMBL:AL646071) (224 aa) fasta scores: E(): 3.6e-62, 65.47% id in 223 aa, and to Neisseria meningitidis hypothetical protein Nmb1075 SWALL:Q9JZF6 (EMBL:AE002458) (222 aa) fasta scores: E(): 2.9e-40, 47.32% id in 224 aa, and to Neisseria meningitidis hypothetical protein Nma1278 SWALL:Q9JUK0 (EMBL:AL162755) (222 aa) fasta scores: E(): 4.6e-40, 46.87% id in 224 aa; hypothetical protein 3372730 3094665 BPSL2820 Burkholderia pseudomallei K96243 hypothetical protein YP_109415.1 3372044 D 272560 CDS YP_109416.1 53720430 3094666 3372727..3374274 1 NC_006350.1 Similar to Pseudomonas putida polynucleotide adenylyltransferase PcnB SWALL:O87789 (EMBL:Y18131) (463 aa) fasta scores: E(): 2.9e-55, 49.01% id in 455 aa, and to Ralstonia solanacearum probable polynucleotide adenylyltransferase PcnB or rsc2627 or rs00931 SWALL:Q8XW48 (EMBL:AL646071) (514 aa) fasta scores: E(): 9.5e-115, 64.36% id in 522 aa, and to Pseudomonas aeruginosa poly(A) polymerase PcnB or pa4727 SWALL:Q9HV72 (EMBL:AE004886) (467 aa) fasta scores: E(): 5.2e-52, 47.13% id in 471 aa; polynucleotide adenylyltransferase 3374274 3094666 BPSL2821 Burkholderia pseudomallei K96243 polynucleotide adenylyltransferase YP_109416.1 3372727 D 272560 CDS YP_109417.1 53720431 3092703 3374311..3374838 1 NC_006350.1 Similar to Escherichia coli 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK or b0142 SWALL:HPPK_ECOLI (SWALL:P26281) (158 aa) fasta scores: E(): 1.7e-13, 39.35% id in 155 aa, and to Ralstonia solanacearum probable 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase FolK or rsc2628 or rs00932 SWALL:Q8XW47 (EMBL:AL646071) (169 aa) fasta scores: E(): 2e-41, 62.13% id in 169 aa, and to Bacillus halodurans 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK or bh0095 SWALL:Q9KGG7 (EMBL:AP001507) (174 aa) fasta scores: E(): 6.1e-19, 43.7% id in 135 aa; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3374838 3092703 BPSL2822 Burkholderia pseudomallei K96243 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_109417.1 3374311 D 272560 CDS YP_109418.1 53720432 3092704 3374835..3375518 1 NC_006350.1 Similar to Lactobacillus acidophilus deoxyadenosine kinase SWALL:DGK1_LACAC (SWALL:Q59483) (214 aa) fasta scores: E(): 6.5e-08, 26.94% id in 193 aa, and to Ralstonia solanacearum deoxyguanosine kinase rsc2629 or rs00933 SWALL:Q8XW46 (EMBL:AL646071) (214 aa) fasta scores: E(): 6.4e-27, 47.29% id in 203 aa, and to uncultured proteobacterium EBAC31A08 predicted deoxypurine kinase SWALL:Q9F7R4 (EMBL:AF279106) (221 aa) fasta scores: E(): 1.5e-24, 42.92% id in 205 aa, and to Deinococcus radiodurans subunit dr0299 SWALL:Q9RXL1 (EMBL:AE001891) (205 aa) fasta scores: E(): 1.1e-18, 38.54% id in 192 aa; deoxyguanosine kinase/deoxyadenosine kinase 3375518 3092704 BPSL2823 Burkholderia pseudomallei K96243 deoxyguanosine kinase/deoxyadenosine kinase YP_109418.1 3374835 D 272560 CDS YP_109419.1 53720433 3093227 3375583..3376398 1 NC_006350.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3376398 panB 3093227 panB Burkholderia pseudomallei K96243 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_109419.1 3375583 D 272560 CDS YP_109420.1 53720434 3091847 complement(3376582..3378600) 1 NC_006350.1 Similar to Ralstonia solanacearum para-aminobenzoate synthetase component I protein PabB or rsc2633 or rs05772 SWALL:Q8XW42 (EMBL:AL646071) (626 aa) fasta scores: E(): 1.4e-57, 50.88% id in 676 aa, and to Neisseria meningitidis para-aminobenzoate synthetase component i/4-amino-4-deoxychorismate lyase, nmb1970 SWALL:Q9JXM6 (EMBL:AE002545) (593 aa) fasta scores: E(): 1e-42, 41.3% id in 661 aa, and to Neisseria meningitidis para-aminobenzoate synthase component I nma0477 SWALL:Q9JW99 (EMBL:AL162753) (598 aa) fasta scores: E(): 1.7e-42, 41.3% id in 661 aa, and to Rhizobium loti hypothetical protein Mlr3005 SWALL:Q98H70 (EMBL:AP003000) (381 aa) fasta scores: E(): 3.3e-30, 42.05% id in 321 aa; hypothetical protein 3378600 3091847 BPSL2825 Burkholderia pseudomallei K96243 hypothetical protein YP_109420.1 3376582 R 272560 CDS YP_109421.1 53720435 3093637 complement(3378622..3379752) 1 NC_006350.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 3379752 dnaJ 3093637 dnaJ Burkholderia pseudomallei K96243 molecular chaperone DnaJ YP_109421.1 3378622 R 272560 CDS YP_109422.1 53720436 3093638 complement(3380019..3381971) 1 NC_006350.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 3381971 dnaK 3093638 dnaK Burkholderia pseudomallei K96243 molecular chaperone DnaK YP_109422.1 3380019 R 272560 CDS YP_109423.1 53720437 3093283 complement(3382564..3383121) 1 NC_006350.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 3383121 3093283 BPSL2829 Burkholderia pseudomallei K96243 heat shock protein GrpE YP_109423.1 3382564 R 272560 CDS YP_109424.1 53720438 3092995 complement(3383618..3384025) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 heat shock protein 15 HslR or b3400 or c4171 or z4754 or ecs4242 SWALL:HSLR_ECOLI (SWALL:P45802) (133 aa) fasta scores: E(): 6.8e-10, 34.84% id in 132 aa, and to Ralstonia solanacearum heat shock protein 15 HslR or rsc2642 or rs04574 SWALL:Q8XW33 (EMBL:AL646071) (131 aa) fasta scores: E(): 1.5e-28, 60.15% id in 128 aa, and to Neisseria meningitidis hypothetical protein (nma1348 or nmb1138) and nmb1176 SWALL:Q9JR17 (EMBL:AL162755) (133 aa) fasta scores: E(): 2.9e-16, 47.96% id in 123 aa; heat shock protein 15 3384025 hslR 3092995 hslR Burkholderia pseudomallei K96243 heat shock protein 15 YP_109424.1 3383618 R 272560 CDS YP_109425.1 53720439 3093284 complement(3384031..3385134) 1 NC_006350.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 3385134 hemH 3093284 hemH Burkholderia pseudomallei K96243 ferrochelatase YP_109425.1 3384031 R 272560 CDS YP_109426.1 53720440 3092424 complement(3385307..3386329) 1 NC_006350.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 3386329 hrcA 3092424 hrcA Burkholderia pseudomallei K96243 heat-inducible transcription repressor YP_109426.1 3385307 R 272560 CDS YP_109427.1 53720441 3092425 3386463..3387365 1 NC_006350.1 catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase 3387365 ppnK 3092425 ppnK Burkholderia pseudomallei K96243 NAD(+)/NADH kinase YP_109427.1 3386463 D 272560 CDS YP_109428.1 53720442 3094553 3387395..3389044 1 NC_006350.1 Similar to Escherichia coli DNA repair protein RecN or RadB or b2616 SWALL:RECN_ECOLI (SWALL:P05824) (553 aa) fasta scores: E(): 5.2e-71, 44.68% id in 555 aa, and to Ralstonia solanacearum probable DNA repair protein RecN or rsc2651 or rs04565 SWALL:Q8XW24 (EMBL:AL646071) (569 aa) fasta scores: E(): 3.3e-115, 64.9% id in 550 aa, and to Homo sapiens D-1 antigen SWALL:Q16490 (EMBL:S45570) (343 aa) from codon 67 to codon 410 fasta scores: E(): 4e-98, 86.29% id in 343 aa, and to Neisseria meningitidis DNA repair protein RecN or nma0952 SWALL:Q9JV87 (EMBL:AL162754) (557 aa) fasta scores: E(): 6.1e-74, 47% id in 551 aa; RecN DNA repair protein 3389044 3094553 BPSL2834 Burkholderia pseudomallei K96243 RecN DNA repair protein YP_109428.1 3387395 D 272560 CDS YP_109429.1 53720443 3093737 complement(3389443..3392226) 1 NC_006350.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3392226 glnE 3093737 glnE Burkholderia pseudomallei K96243 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_109429.1 3389443 R 272560 CDS YP_109430.1 53720444 3094554 3392387..3396580 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2657 or rs04554 SWALL:Q8XW18 (EMBL:AL646071) (1426 aa) fasta scores: E(): 8.9e-140, 35.4% id in 1401 aa, and to Xanthomonas campestris hypothetical protein Xcc2608 SWALL:Q8P7K3 (EMBL:AE012372) (1296 aa) fasta scores: E(): 1e-24, 25.29% id in 1423 aa, and to Xanthomonas axonopodis hypothetical protein Xac2769 SWALL:Q8PIX6 (EMBL:AE011917) (1306 aa) fasta scores: E(): 2.7e-24, 25.55% id in 1444 aa; hypothetical protein 3396580 3094554 BPSL2836 Burkholderia pseudomallei K96243 hypothetical protein YP_109430.1 3392387 D 272560 CDS YP_109431.1 53720445 3091839 3396632..3397459 1 NC_006350.1 Similar to Ralstonia solanacearum nitrilase rsc2658 or rs04553 SWALL:Q8XW17 (EMBL:AL646071) (289 aa) fasta scores: E(): 1.2e-72, 64.31% id in 269 aa, and to Neisseria meningitidis hypothetical protein Nma2044 SWALL:Q9JT13 (EMBL:AL162757) (270 aa) fasta scores: E(): 1.3e-51, 52.67% id in 262 aa, and to Neisseria meningitidis nitrilase nmb0441 SWALL:Q9K0W5 (EMBL:AE002400) (270 aa) fasta scores: E(): 1.8e-51, 53.43% id in 262 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4475 SWALL:Q9HVU6 (EMBL:AE004861) (282 aa) fasta scores: E(): 3.5e-44, 46.06% id in 267 aa; carbon-nitrogen hydrolase 3397459 3091839 BPSL2837 Burkholderia pseudomallei K96243 carbon-nitrogen hydrolase YP_109431.1 3396632 D 272560 CDS YP_109432.1 53720446 3092359 3397539..3399035 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O6 TldD DNA gyrase control protein or b3244 or c3999 SWALL:TLDD_ECOLI (SWALL:P46473) (481 aa) fasta scores: E(): 3.9e-104, 59.38% id in 485 aa, and to Ralstonia solanacearum probable TldD protein or rsc2659 or rs04552 SWALL:Q8XW16 (EMBL:AL646071) (486 aa) fasta scores: E(): 1.4e-146, 80.08% id in 487 aa, and to Xanthomonas campestris TldD protein or xcc2606 SWALL:AAM41878 (EMBL:AE012372) (481 aa) fasta scores: E(): 1.6e-113, 64.22% id in 478 aa; DNA gyrase control protein 3399035 tldD 3092359 tldD Burkholderia pseudomallei K96243 DNA gyrase control protein YP_109432.1 3397539 D 272560 CDS YP_109433.1 53720447 3092395 3399445..3400518 1 NC_006350.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3400518 aroG 3092395 aroG Burkholderia pseudomallei K96243 phospho-2-dehydro-3-deoxyheptonate aldolase YP_109433.1 3399445 D 272560 CDS YP_109434.1 53720448 3092234 complement(3400797..3402005) 1 NC_006350.1 Similar to Alcaligenes eutrophus flavohemoprotein Fhp SWALL:HMPA_ALCEU (SWALL:P39662) (403 aa) fasta scores: E(): 1.9e-68, 52.68% id in 391 aa, and to Salmonella typhimurium flavohemoprotein Hmp or HmpA or FrsB or stm2556 SWALL:HMPA_SALTY (SWALL:P26353) (396 aa) fasta scores: E(): 4.6e-49, 41.85% id in 399 aa; flavohemoprotein 3402005 hmpA 3092234 hmpA Burkholderia pseudomallei K96243 flavohemoprotein YP_109434.1 3400797 R 272560 CDS YP_109435.1 53720449 3091840 complement(3402117..3402689) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2663 or rs04544 SWALL:Q8XW12 (EMBL:AL646071) (185 aa) fasta scores: E(): 4.8e-55, 80.11% id in 181 aa, and to Xanthomonas campestris hypothetical protein Xcc0796 SWALL:AAM40111 (EMBL:AE012179) (185 aa) fasta scores: E(): 2.8e-38, 60% id in 185 aa, and to Xanthomonas axonopodis hypothetical protein Xac0870 SWALL:AAM35758 (EMBL:AE011718) (185 aa) fasta scores: E(): 1.6e-36, 57.83% id in 185 aa; hypothetical protein 3402689 3091840 BPSL2841 Burkholderia pseudomallei K96243 hypothetical protein YP_109435.1 3402117 R 272560 CDS YP_109436.1 53720450 3094160 3402853..3404262 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O6 glycolate oxidase subunit GlcD or Gox or b2979 or c3709 SWALL:GLCD_ECOLI (SWALL:P52075) (499 aa) fasta scores: E(): 1.3e-37, 32.22% id in 419 aa, and to the C-terminal region of Saccharomyces cerevisiae D-lactate dehydrogenase [cytochrome], mitochondrial precursor Dld1 or Dld or ydl174C SWALL:DLD1_YEAST (SWALL:P32891) (587 aa) fasta scores: E(): 1.6e-60, 43.34% id in 436 aa; FAD-binding oxidase 3404262 3094160 BPSL2842 Burkholderia pseudomallei K96243 FAD-binding oxidase YP_109436.1 3402853 D 272560 CDS YP_109437.1 53720451 3093324 3404327..3405820 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O6 glycolate oxidase subunit GlcD or Gox or b2979 or c3709 SWALL:GLCD_ECOLI (SWALL:P52075) (499 aa) fasta scores: E(): 4.2e-114, 59.91% id in 479 aa, and to Ralstonia solanacearum probable glycolate oxidase or rsc2666 or rs04539 SWALL:Q8XW09 (EMBL:AL646071) (497 aa) fasta scores: E(): 6e-152, 76.45% id in 497 aa, and to Pseudomonas aeruginosa glycolate oxidase subunit GlcD or pa5355 SWALL:Q9HTK3 (EMBL:AE004947) (499 aa) fasta scores: E(): 4.8e-115, 61.99% id in 471 aa; glycolate oxidase subunit GlcD 3405820 glcD 3093324 glcD Burkholderia pseudomallei K96243 glycolate oxidase subunit GlcD YP_109437.1 3404327 D 272560 CDS YP_109438.1 53720452 3092816 3405922..3407010 1 NC_006350.1 Similar to Escherichia coli glycolate oxidase subunit GlcE or Gox or b2977.1 SWALL:GLCE_ECOLI (SWALL:P52073) (350 aa) fasta scores: E(): 3e-54, 48.06% id in 362 aa, and to Ralstonia solanacearum probable glycolate oxidase subunit oxidoreductase GlcE or rsc2667 or rs04538 SWALL:Q8XW08 (EMBL:AL646071) (372 aa) fasta scores: E(): 3.3e-70, 56.13% id in 367 aa, and to Pseudomonas aeruginosa glycolate oxidase subunit GlcE or pa5354 SWALL:Q9HTK4 (EMBL:AE004947) (359 aa) fasta scores: E(): 4.3e-55, 50.57% id in 350 aa; glycolate oxidase FAD binding subunit 3407010 glcE 3092816 glcE Burkholderia pseudomallei K96243 glycolate oxidase FAD binding subunit YP_109438.1 3405922 D 272560 CDS YP_109439.1 53720453 3092568 3407017..3408243 1 NC_006350.1 Similar to Escherichia coli glycolate oxidase iron-sulfur subunit GlcF or Gox or b2978 SWALL:GLCF_ECOLI (SWALL:P52074) (407 aa) fasta scores: E(): 1.2e-88, 57% id in 407 aa, and to Ralstonia solanacearum probable glycolate oxidase GlcF or rsc2668 or rs04537 SWALL:Q8XW07 (EMBL:AL646071) (415 aa) fasta scores: E(): 3.7e-99, 60.09% id in 416 aa, and to Pseudomonas aeruginosa glycolate oxidase subunit GlcF or pa5353 SWALL:Q9HTK5 (EMBL:AE004947) (408 aa) fasta scores: E(): 5.7e-82, 52.56% id in 409 aa; glycolate oxidase iron-sulfur subunit 3408243 glcF 3092568 glcF Burkholderia pseudomallei K96243 glycolate oxidase iron-sulfur subunit YP_109439.1 3407017 D 272560 CDS YP_109440.1 53720454 3094161 3408489..3409187 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2683 or rs00038 SWALL:Q8XVZ2 (EMBL:AL646071) (240 aa) fasta scores: E(): 1.1e-53, 68.35% id in 237 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0394 SWALL:Y394_PSEAE (SWALL:P24562) (230 aa) fasta scores: E(): 7.3e-52, 68.26% id in 230 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YggS or b2951 or c3537 or z4296 or ecs3826 SWALL:YGGS_ECOLI (SWALL:P52054) (234 aa) fasta scores: E(): 7e-46, 60.34% id in 232 aa; hypothetical protein 3409187 3094161 BPSL2846 Burkholderia pseudomallei K96243 hypothetical protein YP_109440.1 3408489 D 272560 CDS YP_109441.1 53720455 3093429 3409222..3410034 1 NC_006350.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 3410034 3093429 BPSL2847 Burkholderia pseudomallei K96243 pyrroline-5-carboxylate reductase YP_109441.1 3409222 D 272560 CDS YP_109442.1 53720456 3094534 complement(3410457..3411272) 1 NC_006350.1 Similar to Escherichia coli phosphonate transport system permease PhnE or b4013/b4104 SWALL:PHNE_ECOLI (SWALL:P16683) (276 aa) fasta scores: E(): 1.5e-61, 61.33% id in 269 aa, and to Escherichia coli O157:H7 membrane channel protein component of Phn transporter PhnE or z5706 or ecs5086 SWALL:Q8XDV9 (EMBL:AE005643) (276 aa) fasta scores: E(): 2.6e-61, 61.33% id in 269 aa, and to Pseudomonas aeruginosa phosphonate transport protein PhnE or pa3382 SWALL:Q9HYL9 (EMBL:AE004759) (264 aa) fasta scores: E(): 6.8e-61, 61.39% id in 259 aa; phosphonate transport protein PhnE 3411272 phnE 3094534 phnE Burkholderia pseudomallei K96243 phosphonate transport protein PhnE YP_109442.1 3410457 R 272560 CDS YP_109443.1 53720457 3091666 complement(3411269..3412264) 1 NC_006350.1 Similar to Escherichia coli phosphonates-binding periplasmic protein precursor PhnD or PsiD or b4105 SWALL:PHND_ECOLI (SWALL:P16682) (338 aa) fasta scores: E(): 1.3e-51, 46.2% id in 316 aa, and to Pseudomonas aeruginosa binding protein component of ABC phosphonate transporter pa3383 SWALL:Q9HYL8 (EMBL:AE004759) (334 aa) fasta scores: E(): 3.3e-53, 45.34% id in 333 aa; phosphonates-binding periplasmic protein 3412264 phnD 3091666 phnD Burkholderia pseudomallei K96243 phosphonates-binding periplasmic protein YP_109443.1 3411269 R 272560 CDS YP_109444.1 53720458 3091665 complement(3412347..3413318) 1 NC_006350.1 Similar to Escherichia coli phosphonates transport ATP-binding protein PhnC or b4106 SWALL:PHNC_ECOLI (SWALL:P16677) (262 aa) fasta scores: E(): 4.2e-38, 54.06% id in 246 aa, and to Pseudomonas aeruginosa ATP-binding component of ABC phosphonate transporter PhnC or pa3384 SWALL:Q9HYL7 (EMBL:AE004759) (278 aa) fasta scores: E(): 3.6e-39, 52.03% id in 271 aa, and to Escherichia coli O157:H7 ATP-binding component of phosphonate transport PhnC or z5708 or ecs5088 SWALL:Q8XDV7 (EMBL:AE005643) (262 aa) fasta scores: E(): 1.4e-38, 54.87% id in 246 aa; possible alternative start site at codon 18; phosphonates transport ATP-binding protein PhnC 3413318 phnC 3091665 phnC Burkholderia pseudomallei K96243 phosphonates transport ATP-binding protein PhnC YP_109444.1 3412347 R 272560 CDS YP_109445.1 53720459 3093484 complement(3413504..3414634) 1 NC_006350.1 Similar to Escherichia coli phosphonates metabolism protein PhnM or b4095 SWALL:PHNM_ECOLI (SWALL:P16689) (378 aa) fasta scores: E(): 1.1e-50, 42.69% id in 356 aa, and to Brucella melitensis PhnM protein bmei1106 SWALL:Q8YGQ2 (EMBL:AE009550) (379 aa) fasta scores: E(): 4.1e-64, 48.8% id in 377 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3374 SWALL:Q9HYM7 (EMBL:AE004759) (387 aa) fasta scores: E(): 4.6e-63, 49.74% id in 384 aa; phosphonate metabolism PhnM protein 3414634 phnM 3093484 phnM Burkholderia pseudomallei K96243 phosphonate metabolism PhnM protein YP_109445.1 3413504 R 272560 CDS YP_109446.1 53720460 3093832 complement(3414649..3415446) 1 NC_006350.1 Similar to Escherichia coli phosphonates transport ATP-binding protein PhnL or b4096 SWALL:PHNL_ECOLI (SWALL:P16679) (226 aa) fasta scores: E(): 9e-35, 56% id in 225 aa, and to Rhizobium loti phosphonate transport ATP-binding protein PhnL SWALL:CAD31337 (EMBL:AL672114) (239 aa) fasta scores: E(): 3.9e-39, 61.71% id in 222 aa, and to Rhizobium loti phosphonates transport ATP-binding protein, PhnL mlr9286 SWALL:Q981P7 (EMBL:AP003015) (244 aa) fasta scores: E(): 8.1e-39, 62.16% id in 222 aa; possible alternative start site at codon 26; phosphonates transport ATP-binding protein PhnL 3415446 phnL 3093832 phnL Burkholderia pseudomallei K96243 phosphonates transport ATP-binding protein PhnL YP_109446.1 3414649 R 272560 CDS YP_109447.1 53720461 3093831 complement(3415455..3416225) 1 NC_006350.1 Similar to Escherichia coli phosphonates transport ATP-binding protein PhnK or b4097 SWALL:PHNK_ECOLI (SWALL:P16678) (252 aa) fasta scores: E(): 3.8e-51, 65.07% id in 252 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa3376 SWALL:Q9HYM5 (EMBL:AE004759) (271 aa) fasta scores: E(): 8.1e-59, 71.03% id in 252 aa, and to Anabaena sp. phosphonate ABC transporter ATP-binding component PhnK or all2218 SWALL:Q8YUW3 (EMBL:AP003588) (257 aa) fasta scores: E(): 2.6e-54, 65.07% id in 252 aa; phosphonate C-P lyase system protein PhnK 3416225 phnK 3093831 phnK Burkholderia pseudomallei K96243 phosphonate C-P lyase system protein PhnK YP_109447.1 3415455 R 272560 CDS YP_109448.1 53720462 3094145 complement(3416222..3417196) 1 NC_006350.1 Similar to Escherichia coli protein PhnJ or b4098 SWALL:PHNJ_ECOLI (SWALL:P16688) (281 aa) fasta scores: E(): 1.2e-78, 71.16% id in 267 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3377 SWALL:Q9HYM4 (EMBL:AE004759) (294 aa) fasta scores: E(): 2.5e-82, 69.72% id in 294 aa, and to Rhizobium loti phosphonate metabolism protein, PhnJ mlr9282 SWALL:Q981Q0 (EMBL:AP003015) (297 aa) fasta scores: E(): 4e-80, 68.98% id in 287 aa; phosphonate metabolism PhnJ protein 3417196 phnJ 3094145 phnJ Burkholderia pseudomallei K96243 phosphonate metabolism PhnJ protein YP_109448.1 3416222 R 272560 CDS YP_109449.1 53720463 3094144 complement(3417193..3418407) 1 NC_006350.1 Similar to Escherichia coli phosphonate metabolism PhnI protein or b4099 SWALL:PHNI_ECOLI (SWALL:P16687) (354 aa) fasta scores: E(): 1.1e-28, 59.45% id in 370 aa, and to Anabaena sp. phosphonate metabolism protein PhnI or all2222 SWALL:Q8YUV9 (EMBL:AP003588) (415 aa) fasta scores: E(): 1.9e-54, 55.02% id in 398 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3378 SWALL:Q9HYM3 (EMBL:AE004759) (366 aa) fasta scores: E(): 2.7e-33, 64.19% id in 377 aa; phosphonate metabolism PhnI protein 3418407 phnI 3094144 phnI Burkholderia pseudomallei K96243 phosphonate metabolism PhnI protein YP_109449.1 3417193 R 272560 CDS YP_109450.1 53720464 3093008 complement(3418407..3419036) 1 NC_006350.1 Similar to Escherichia coli PhnH protein or b4100 SWALL:PHNH_ECOLI (SWALL:P16686) (194 aa) fasta scores: E(): 1.4e-16, 39.37% id in 193 aa, and to Agrobacterium tumefaciens hypothetical protein PhnH or atu0180 or agr_c_302 SWALL:Q8UIW1 (EMBL:AE008992) (203 aa) fasta scores: E(): 1.5e-20, 41.23% id in 194 aa, and to Rhizobium loti hypothetical protein Mlr3343 SWALL:Q98GG3 (EMBL:AP003001) (203 aa) fasta scores: E(): 7e-20, 39.39% id in 198 aa, and to Rhizobium meliloti PhnH protein or rb1452 or smb20760 SWALL:PHNH_RHIME (SWALL:Q52985) (200 aa) fasta scores: E(): 4.8e-19, 42.13% id in 197 aa; carbon-phosphorus lyase complex subunit 3419036 phnH 3093008 phnH Burkholderia pseudomallei K96243 carbon-phosphorus lyase complex subunit YP_109450.1 3418407 R 272560 CDS YP_109451.1 53720465 3093458 complement(3419033..3419581) 1 NC_006350.1 Similar to Escherichia coli PhnG protein or b4101 SWALL:PHNG_ECOLI (SWALL:P16685) (150 aa) fasta scores: E(): 8.5e-06, 38.15% id in 173 aa, and to Rhizobium loti C-P lyase subunit phnJ protein phosphonate metabolism phnG SWALL:CAD31343 (EMBL:AL672114) (151 aa) fasta scores: E(): 1e-09, 43.19% id in 169 aa, and to Rhizobium loti phosphonate metabolism protein mll9155 SWALL:Q982B0 (EMBL:AP003015) (154 aa) fasta scores: E(): 2.1e-09, 42.3% id in 182 aa; phosphonate metabolism PhnG protein 3419581 phnG 3093458 phnG Burkholderia pseudomallei K96243 phosphonate metabolism PhnG protein YP_109451.1 3419033 R 272560 CDS YP_109452.1 53720466 3093457 3419714..3420532 1 NC_006350.1 Similar to Escherichia coli probable transcriptional regulator PhnF or b4102 SWALL:PHNF_ECOLI (SWALL:P16684) (241 aa) fasta scores: E(): 4.1e-11, 32.07% id in 212 aa, and to Rhizobium loti transcriptional regulator mll3341 SWALL:Q98GG5 (EMBL:AP003001) (249 aa) fasta scores: E(): 1.1e-24, 41.42% id in 239 aa, and to Rhizobium meliloti hypothetical transcriptional regulator Rb1450 or smb20758 SWALL:YPF0_RHIME (SWALL:O86029) (243 aa) fasta scores: E(): 1.7e-24, 38.23% id in 238 aa, and to Agrobacterium tumefaciens transcriptional regulator, GntR family atu0182 or agr_c_306 SWALL:Q8UIV9 (EMBL:AE008992) (245 aa) fasta scores: E(): 2.8e-22, 34.31% id in 239 aa; GntR family transcriptional regulator 3420532 phnF 3093457 phnF Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_109452.1 3419714 D 272560 CDS YP_109453.1 53720467 3093430 3420522..3421319 1 NC_006350.1 Similar to Brucella melitensis hypothetical cytosolic protein Bmei1107 SWALL:Q8YGQ1 (EMBL:AE009550) (243 aa) fasta scores: E(): 1.1e-18, 35.53% id in 242 aa, and to Agrobacterium tumefaciens hypothetical protein atu0170 or agr_c_280 SWALL:Q8UIX1 (EMBL:AE008991) (232 aa) fasta scores: E(): 1.4e-17, 36.2% id in 232 aa, and to Rhizobium meliloti hypothetical protein rb1170 or smb20876 SWALL:Q92UG1 (EMBL:AL603646) (265 aa) fasta scores: E(): 3.6e-16, 34.83% id in 244 aa; hypothetical protein 3421319 3093430 BPSL2859 Burkholderia pseudomallei K96243 hypothetical protein YP_109453.1 3420522 D 272560 CDS YP_109454.1 53720468 3094078 3421316..3421870 1 NC_006350.1 Similar to Escherichia coli ATP-binding protein PhnN or b4094 SWALL:PHNN_ECOLI (SWALL:P16690) (185 aa) fasta scores: E(): 9.5e-24, 48.58% id in 177 aa, and to Rhizobium loti ATP-binding component of phosphonate transport mll9141 SWALL:Q982C3 (EMBL:AP003015) (187 aa) fasta scores: E(): 1.3e-24, 48.85% id in 174 aa; ATP-binding protein PhnN 3421870 phnN 3094078 phnN Burkholderia pseudomallei K96243 ATP-binding protein PhnN YP_109454.1 3421316 D 272560 CDS YP_109455.1 53720469 3094205 complement(3422301..3423251) 1 NC_006350.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 3423251 ubiA 3094205 ubiA Burkholderia pseudomallei K96243 4-hydroxybenzoate octaprenyltransferase YP_109455.1 3422301 R 272560 CDS YP_109456.1 53720470 3093451 complement(3423627..3424163) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa1607 SWALL:Q9I3B4 (EMBL:AE004588) (146 aa) fasta scores: E(): 4.3e-28, 55.47% id in 146 aa, and to Rhizobium meliloti hypothetical protein ra1074 or sma1960 SWALL:Q92Y14 (EMBL:AE007293) (125 aa) fasta scores: E(): 1.8e-20, 54.83% id in 124 aa, and to Caulobacter crescentus hypothetical protein Cc0645 SWALL:Q9AAF6 (EMBL:AE005740) (188 aa) fasta scores: E(): 1.7e-17, 40.54% id in 148 aa; hypothetical protein 3424163 3093451 BPSL2862 Burkholderia pseudomallei K96243 hypothetical protein YP_109456.1 3423627 R 272560 CDS YP_109457.1 53720471 3093452 complement(3424448..3424936) 1 NC_006350.1 Similar to Bacillus anthracis miniferritin Dlp1 SWALL:Q8RPQ2 (EMBL:AF374268) (146 aa) fasta scores: E(): 3e-13, 38.73% id in 142 aa, and to Ralstonia solanacearum DNA protection during starvation or oxidative stress transcription regulator protein DPS or rsc2687 or rs00034 SWALL:Q8XVY8 (EMBL:AL646071) (166 aa) fasta scores: E(): 1.6e-48, 79.51% id in 166 aa, and to Anabaena sp. hypothetical protein All4145 SWALL:Q8YPP7 (EMBL:AP003595) (163 aa) fasta scores: E(): 1.3e-44, 77.01% id in 161 aa; ferritin 3424936 3093452 BPSL2863 Burkholderia pseudomallei K96243 ferritin YP_109457.1 3424448 R 272560 CDS YP_109458.1 53720472 3092019 complement(3425136..3425309) 1 NC_006350.1 No database matches. Doubtful CDS; hypothetical protein 3425309 3092019 BPSL2864 Burkholderia pseudomallei K96243 hypothetical protein YP_109458.1 3425136 R 272560 CDS YP_109459.1 53720473 3092072 complement(3425408..3427654) 1 NC_006350.1 Virtually identical to previously sequenced Burkholderia pseudomallei catalase-peroxidase KatG SWALL:Q939D2 (EMBL:AY040244) (619 aa) fasta scores: E(): 0, 97.26% id in 622 aa, and similar to Methanosarcina acetivorans catalase/peroxidase ma0972 SWALL:Q8TS34 (EMBL:AE010762) (736 aa) fasta scores: E(): 0, 77.62% id in 733 aa, and to Rhizobium loti catalase/peroxidase mlr6940 SWALL:Q987S0 (EMBL:AP003010) (756 aa) fasta scores: E(): 0, 73.61% id in 758 aa; catalase-peroxidase 3427654 katG 3092072 katG Burkholderia pseudomallei K96243 catalase-peroxidase YP_109459.1 3425408 R 272560 CDS YP_109460.1 53720474 3093036 complement(3428080..3429039) 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei oxidative stress regulatory protein OxyR SWALL:Q939D3 (EMBL:AY040244) (319 aa) fasta scores: E(): 7.7e-125, 100% id in 319 aa. Highly similar to Ralstonia solanacearum probable hydrogen peroxide-inducible genes activator transcription regulator protein oxyR or rsc2690 or rs00030 SWALL:Q8XVY5 (EMBL:AL646071) (317 aa) fasta scores: E(): 6.5e-94, 77.42% id in 319 aa; oxidative stress regulatory protein 3429039 oxyR 3093036 oxyR Burkholderia pseudomallei K96243 oxidative stress regulatory protein YP_109460.1 3428080 R 272560 CDS YP_109461.1 53720475 3092198 complement(3429175..3431421) 1 NC_006350.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 3431421 recG 3092198 recG Burkholderia pseudomallei K96243 ATP-dependent DNA helicase RecG YP_109461.1 3429175 R 272560 CDS YP_109462.1 53720476 3092055 3432038..3433120 1 NC_006350.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3433120 queA 3092055 queA Burkholderia pseudomallei K96243 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_109462.1 3432038 D 272560 CDS YP_109463.1 53720477 3092225 3433421..3434614 1 NC_006350.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 3434614 tgt 3092225 tgt Burkholderia pseudomallei K96243 queuine tRNA-ribosyltransferase YP_109463.1 3433421 D 272560 CDS YP_109464.1 53720478 3092020 3435044..3435370 1 NC_006350.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 3435370 yajC 3092020 yajC Burkholderia pseudomallei K96243 preprotein translocase subunit YajC YP_109464.1 3435044 D 272560 CDS YP_109465.1 53720479 3091980 3435478..3437502 1 NC_006350.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3437502 secD 3091980 secD Burkholderia pseudomallei K96243 preprotein translocase subunit SecD YP_109465.1 3435478 D 272560 CDS YP_109466.1 53720480 3092984 3437518..3438468 1 NC_006350.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3438468 secF 3092984 secF Burkholderia pseudomallei K96243 preprotein translocase subunit SecF YP_109466.1 3437518 D 272560 CDS YP_109467.1 53720481 3092293 complement(3438714..3439337) 1 NC_006350.1 Similar to Ralstonia solanacearum probable sugar-proton symporter transmembrane protein rsp0536 or rs00416 SWALL:Q8XSE0 (EMBL:AL646079) (441 aa) fasta scores: E(): 1.2e-21, 43.13% id in 204 aa, and to the C-terminal region of Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 1.2e-14, 35.02% id in 177 aa; hypothetical protein 3439337 3092293 BPSL2873 Burkholderia pseudomallei K96243 hypothetical protein YP_109467.1 3438714 R 272560 CDS YP_109468.1 53720482 3092294 complement(3439438..3440016) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsc2717 or rs00005 SWALL:Q8XVW0 (EMBL:AL646071) (198 aa) fasta scores: E(): 5.8e-48, 65.26% id in 190 aa, and to Salmonella typhi exported protein sty1443 SWALL:Q8Z764 (EMBL:AL627270) (191 aa) fasta scores: E(): 4.7e-18, 36.59% id in 194 aa; hypothetical protein 3440016 3092294 BPSL2874 Burkholderia pseudomallei K96243 hypothetical protein YP_109468.1 3439438 R 272560 CDS YP_109469.1 53720483 3094291 complement(3440083..3440643) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein rsc2718 or rs00003 SWALL:Q8XVV9 (EMBL:AL646071) (189 aa) fasta scores: E(): 1.9e-32, 53.51% id in 185 aa, and to Xanthomonas axonopodis hypothetical protein xac3034 SWALL:AAM37879 (EMBL:AE011945) (189 aa) fasta scores: E(): 7.4e-10, 32% id in 175 aa; hypothetical protein 3440643 3094291 BPSL2875 Burkholderia pseudomallei K96243 hypothetical protein YP_109469.1 3440083 R 272560 CDS YP_109470.1 53720484 3094292 complement(3440655..3441218) 1 NC_006350.1 Similar to Ralstonia solanacearum cytochrome b-561 transmembrane protein rsc2719 or rs00083 SWALL:Q8XVV8 (EMBL:AL646071) (195 aa) fasta scores: E(): 5.8e-36, 55.08% id in 187 aa, and to Xanthomonas campestris cytochrome b561 xcc2850 SWALL:Q8P6W5 (EMBL:AE012398) (187 aa) fasta scores: E(): 8.8e-20, 41.56% id in 166 aa; cytochrome b-561 membrane protein 3441218 3094292 BPSL2876 Burkholderia pseudomallei K96243 cytochrome b-561 membrane protein YP_109470.1 3440655 R 272560 CDS YP_109471.1 53720485 3092120 3441483..3442139 1 NC_006350.1 Similar to Vibrio cholerae paraquat-inducible protein A vc1753 SWALL:Q9KR89 (EMBL:AE004252) (434 aa) fasta scores: E(): 1.5e-15, 31.22% id in 205 aa, and to the C-terminal region of Escherichia coli, and Escherichia coli O6 paraquat-inducible protein A PqiA or Pqi5A or b0950 or c1086 SWALL:PQIA_ECOLI (SWALL:P43670) (417 aa) fasta scores: E(): 2.1e-09, 26.02% id in 196 aa; paraquat-inducible protein 3442139 3092120 BPSL2877 Burkholderia pseudomallei K96243 paraquat-inducible protein YP_109471.1 3441483 D 272560 CDS YP_109472.1 53720486 3092121 3442136..3442798 1 NC_006350.1 Similar to Pseudomonas aeruginosa paraquat-inducible protein A SWALL:Q9APY1 (EMBL:AF241171) (237 aa) fasta scores: E(): 6.1e-35, 54.58% id in 207 aa, and to the C-terminal region of Escherichia coli, and Escherichia coli O6 paraquat-inducible protein A PqiA or Pqi5A or b0950 or c1086 SWALL:PQIA_ECOLI (SWALL:P43670) (417 aa) fasta scores: E(): 1.4e-24, 41.74% id in 218 aa; paraquat-inducible protein 3442798 3092121 BPSL2878 Burkholderia pseudomallei K96243 paraquat-inducible protein YP_109472.1 3442136 D 272560 CDS YP_109473.1 53720487 3093537 3442785..3444446 1 NC_006350.1 Identical to previously sequenced Burkholderia pseudomallei paraquat-inducible protein Lpw206-207 SWALL:Q93M60 (EMBL:AY027530) (553 aa) fasta scores: E(): 2.9e-200, 99.81% id in 553 aa, and to Escherichia coli paraquat-inducible protein B PqiB or Pqi5B or b0951 SWALL:PQIB_ECOLI (SWALL:P43671) (546 aa) fasta scores: E(): 2.5e-48, 33.72% id in 507 aa; paraquat-inducible protein 3444446 lpw206-207 3093537 lpw206-207 Burkholderia pseudomallei K96243 paraquat-inducible protein YP_109473.1 3442785 D 272560 CDS YP_109474.1 53720488 3094142 3444443..3445213 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0600 or rs04845 SWALL:Q8Y1T9 (EMBL:AL646060) (211 aa) fasta scores: E(): 1.8e-16, 36.57% id in 216 aa; lipoprotein 3445213 3094142 BPSL2880 Burkholderia pseudomallei K96243 lipoprotein YP_109474.1 3444443 D 272560 CDS YP_109475.1 53720489 3094143 3446148..3448265 1 NC_006350.1 Similar to Ralstonia solanacearum site-specific recombinase transmembrane protein rsc1012 or rs04272 SWALL:Q8Y0N1 (EMBL:AL646062) (696 aa) fasta scores: E(): 1.3e-121, 51.07% id in 695 aa, and to Neisseria meningitidis site-specific recombinase nmb1278 SWALL:Q9JZ60 (EMBL:AE002476) (668 aa) fasta scores: E(): 7.6e-36, 27.78% id in 583 aa; hypothetical protein 3448265 3094143 BPSL2881 Burkholderia pseudomallei K96243 hypothetical protein YP_109475.1 3446148 D 272560 CDS YP_109476.1 53720490 3092339 3448434..3449726 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2739 or rs00115 SWALL:Q8XVT8 (EMBL:AL646071) (471 aa) fasta scores: E(): 4.1e-74, 53.72% id in 456 aa, and to Neisseria meningitidis hypothetical protein nmb0455 SWALL:Q9K0V4 (EMBL:AE002401) (380 aa) fasta scores: E(): 2.6e-49, 43.06% id in 418 aa; RNA-methylase 3449726 3092339 BPSL2882 Burkholderia pseudomallei K96243 RNA-methylase YP_109476.1 3448434 D 272560 CDS YP_109477.1 53720491 3092340 3451155..3451565 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2671 or rs04534 SWALL:Q8XW04 (EMBL:AL646071) (131 aa) fasta scores: E(): 1.2e-12, 43.22% id in 118 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical protein stm0409 or sty0447 SWALL:Q8XFK5 (EMBL:AE008714) (121 aa) fasta scores: E(): 3.9e-11, 41.8% id in 122 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 3451565 3092340 BPSL2883 Burkholderia pseudomallei K96243 hypothetical protein YP_109477.1 3451155 D 272560 CDS YP_109478.1 53720492 3092416 3452044..3452730 1 NC_006350.1 Similar to Ralstonia solanacearum repressor transcription regulator protein rsc2673 or rs00048 SWALL:Q8XW02 (EMBL:AL646071) (232 aa) fasta scores: E(): 1.5e-40, 50.67% id in 223 aa, and to Rhizobium loti transcriptional regulator mlr3764 SWALL:Q98FI3 (EMBL:AP003002) (239 aa) fasta scores: E(): 3.4e-39, 48.63% id in 220 aa; hypothetical protein 3452730 3092416 BPSL2884 Burkholderia pseudomallei K96243 hypothetical protein YP_109478.1 3452044 D 272560 CDS YP_109479.1 53720493 3092871 complement(3453240..3454694) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) PntB or b1602 or c1994 or z2597 or ecs2308 SWALL:PNTB_ECOLI (SWALL:P07002) (462 aa) fasta scores: E(): 1.3e-64, 50.3% id in 487 aa, and to Ralstonia solanacearum probable transmembrane NADP(P) transhydrogenase subunit beta rsc2733 or rs00121 SWALL:Q8XVU4 (EMBL:AL646071) (486 aa) fasta scores: E(): 1.7e-135, 80.16% id in 489 aa; NAD(P) transhydrogenase subunit beta 3454694 pntB 3092871 pntB Burkholderia pseudomallei K96243 NAD(P) transhydrogenase subunit beta YP_109479.1 3453240 R 272560 CDS YP_109480.1 53720494 3093542 complement(3454691..3455020) 1 NC_006350.1 Similar to the C-terminal region of Escherichia coli NAD(P) transhydrogenase subunit alpha (EC 1.6.1.2) PntA or b1603 SWALL:PNTA_ECOLI (SWALL:P07001) (510 aa) fasta scores: E(): 4.5e-12, 58.53% id in 82 aa, and to Ralstonia solanacearum probable transmembrane NAD(P) transhydrogenase subunit alpha rsc2732 or rs00122 SWALL:Q8XVU5 (EMBL:AL646071) (107 aa) fasta scores: E(): 9.1e-26, 80.61% id in 98 aa; NAD(P) transhydrogenase subunit alpha 3455020 pntAB 3093542 pntAB Burkholderia pseudomallei K96243 NAD(P) transhydrogenase subunit alpha YP_109480.1 3454691 R 272560 CDS YP_109481.1 53720495 3093541 complement(3455033..3456172) 1 NC_006350.1 Similar to the N-terminal region of Escherichia coli NAD(P) transhydrogenase subunit alpha (EC 1.6.1.2) PntA or b1603 SWALL:PNTA_ECOLI (SWALL:P07001) (510 aa) fasta scores: E(): 4.9e-42, 44.85% id in 379 aa, and to Ralstonia solanacearum probable NAD(P) transhydrogenase subunit alpha rsc2730 or rs00124 SWALL:Q8XVU7 (EMBL:AL646071) (379 aa) fasta scores: E(): 3.6e-92, 72.75% id in 378 aa; NAD(P) transhydrogenase subunit alpha 3456172 pntAA 3093541 pntAA Burkholderia pseudomallei K96243 NAD(P) transhydrogenase subunit alpha YP_109481.1 3455033 R 272560 CDS YP_109482.1 53720496 3092417 3456416..3456925 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 NUDIX hydrolase YmfB or b1134 or c1513 or z1863 or ecs1606 SWALL:YMFB_ECOLI (SWALL:P75965) (153 aa) fasta scores: E(): 9e-13, 38.77% id in 147 aa, and to Ralstonia solanacearum hypothetical protein rsc2724 or rs00130 SWALL:Q8XVV3 (EMBL:AL646071) (168 aa) fasta scores: E(): 9.4e-37, 57.14% id in 161 aa; hydrolase 3456925 3092417 BPSL2888 Burkholderia pseudomallei K96243 hydrolase YP_109482.1 3456416 D 272560 CDS YP_109483.1 53720497 3093062 3456922..3458073 1 NC_006350.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 3458073 mnmA 3093062 mnmA Burkholderia pseudomallei K96243 tRNA-specific 2-thiouridylase MnmA YP_109483.1 3456922 D 272560 CDS YP_109484.1 53720498 3092460 3458195..3459835 1 NC_006350.1 Similar to Leptospira interrogans glutamate synthase GltB2 or lb286 SWALL:AAN51845 (EMBL:AE011615) (550 aa) fasta scores: E(): 2.5e-55, 42.5% id in 487 aa, and to Pseudomonas putida glutamate synthase, large subunit, pp1060 SWALL:AAN66685 (EMBL:AE016778) (539 aa) fasta scores: E(): 1.4e-141, 65.16% id in 534 aa; glutamate synthase 3459835 3092460 BPSL2890 Burkholderia pseudomallei K96243 glutamate synthase YP_109484.1 3458195 D 272560 CDS YP_109485.1 53720499 3092461 complement(3460103..3460711) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O6 hypothetical GST-like protein YibF or b3592 or c4413 SWALL:YIBF_ECOLI (SWALL:P32105) (202 aa) fasta scores: E(): 4.1e-20, 35.82% id in 201 aa, and to Ralstonia solanacearum glutathione S-transferase rsc2721 or rs00001 SWALL:Q8XVV6 (EMBL:AL646071) (202 aa) fasta scores: E(): 1.2e-58, 66.33% id in 202 aa; glutathione S-transferase-like protein 3460711 3092461 BPSL2891 Burkholderia pseudomallei K96243 glutathione S-transferase-like protein YP_109485.1 3460103 R 272560 CDS YP_109486.1 53720500 3093835 3461269..3462678 1 NC_006350.1 Similar to Escherichia coli Xaa-Pro aminopeptidase PepP or b2908 SWALL:AMPP_ECOLI (SWALL:P15034) (440 aa) fasta scores: E(): 3.6e-54, 43.04% id in 446 aa, and to Ralstonia solanacearum probable Xaa-Pro aminopeptidase rsc0509 or rs04998 SWALL:Q8Y227 (EMBL:AL646059) (458 aa) fasta scores: E(): 1.8e-118, 67.62% id in 454 aa; aminopeptidase 3462678 3093835 BPSL2892 Burkholderia pseudomallei K96243 aminopeptidase YP_109486.1 3461269 D 272560 CDS YP_109487.1 53720501 3093836 3462723..3463916 1 NC_006350.1 Similar to Escherichia coli 2-octaprenyl-6-methoxyphenol hydroxylase UbiH or VisB or b2907 SWALL:UBIH_ECOLI (SWALL:P25534) (392 aa) fasta scores: E(): 6.8e-32, 35.36% id in 393 aa, and to Ralstonia solanacearum probable 2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase rsc0508 or rs04999 SWALL:Q8Y228 (EMBL:AL646059) (411 aa) fasta scores: E(): 9.9e-46, 54.8% id in 416 aa; hypothetical protein 3463916 3093836 BPSL2893 Burkholderia pseudomallei K96243 hypothetical protein YP_109487.1 3462723 D 272560 CDS YP_109488.1 53720502 3094392 3464124..3465188 1 NC_006350.1 Similar to Rhodobacter capsulatus nitrogen regulation protein NifR3 SWALL:NIR3_RHOCA (SWALL:Q08111) (324 aa) fasta scores: E(): 9.7e-44, 45.89% id in 329 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YhdG or b3260 or c4026 or z4620 or ecs4132 SWALL:YHDG_ECOLI (SWALL:P25717) (321 aa) fasta scores: E(): 5e-63, 56.69% id in 321 aa; nitrogen regulation-like protein 3465188 3094392 BPSL2894 Burkholderia pseudomallei K96243 nitrogen regulation-like protein YP_109488.1 3464124 D 272560 CDS YP_109489.1 53720503 3094663 3465185..3465418 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, Salmonella typhi, and Serratia marcescens DNA-binding protein Fis or b3261 or c4027 or z4621 or ecs4133 or stm3385 or sty3565 SWALL:FIS_ECOLI (SWALL:P11028) (98 aa) fasta scores: E(): 1.5e-09, 40.78% id in 76 aa, and to Ralstonia solanacearum fis-like DNA-binding protein rsc0505 or rs05017 SWALL:FISL_RALSO (SWALL:Q8Y231) (77 aa) fasta scores: E(): 1.1e-20, 70.13% id in 77 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; DNA-binding protein Fis 3465418 fis 3094663 fis Burkholderia pseudomallei K96243 DNA-binding protein Fis YP_109489.1 3465185 D 272560 CDS YP_109490.1 53720504 3091910 3465463..3467028 1 NC_006350.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3467028 purH 3091910 purH Burkholderia pseudomallei K96243 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_109490.1 3465463 D 272560 CDS YP_109491.1 53720505 3092930 3467395..3467937 1 NC_006350.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3467937 ruvC 3092930 ruvC Burkholderia pseudomallei K96243 Holliday junction resolvase YP_109491.1 3467395 D 272560 CDS YP_109492.1 53720506 3092278 3468011..3468592 1 NC_006350.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3468592 ruvA 3092278 ruvA Burkholderia pseudomallei K96243 Holliday junction DNA helicase RuvA YP_109492.1 3468011 D 272560 CDS YP_109493.1 53720507 3093138 3468774..3469844 1 NC_006350.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3469844 ruvB 3093138 ruvB Burkholderia pseudomallei K96243 Holliday junction DNA helicase RuvB YP_109493.1 3468774 D 272560 CDS YP_109494.1 53720508 3094393 3469870..3470826 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsp1255 or rs05298 SWALL:Q8XQH2 (EMBL:AL646083) (298 aa) fasta scores: E(): 1e-65, 60.33% id in 295 aa, and to Xanthomonas axonopodis hypothetical protein xac3714 SWALL:AAM38557 (EMBL:AE012021) (308 aa) fasta scores: E(): 7.5e-47, 48.23% id in 284 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 3470826 3094393 BPSL2900 Burkholderia pseudomallei K96243 hypothetical protein YP_109494.1 3469870 D 272560 CDS YP_109495.1 53720509 3093110 3470958..3472100 1 NC_006350.1 Very low similarity to Pseudomonas aeruginosa hypothetical protein pa4384 SWALL:Q9HW18 (EMBL:AE004854) (228 aa) fasta scores: E(): 3.6e-05, 31.84% id in 157 aa; lipoprotein 3472100 3093110 BPSL2901 Burkholderia pseudomallei K96243 lipoprotein YP_109495.1 3470958 D 272560 CDS YP_109496.1 53720510 3093111 complement(3472256..3472945) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri probable phosphoglycerate mutase GpmB or b4395 or z5997 or ecs5353 or sf4427 SWALL:GPMB_ECOLI (SWALL:P36942) (215 aa) fasta scores: E(): 1.7e-12, 36.19% id in 221 aa, and to Ralstonia solanacearum phosphoglycerate mutase 2 protein rsc0499 or rs05023 SWALL:Q8Y237 (EMBL:AL646059) (227 aa) fasta scores: E(): 1.8e-33, 46.84% id in 222 aa; phosphoglycerate mutase 3472945 3093111 BPSL2902 Burkholderia pseudomallei K96243 phosphoglycerate mutase YP_109496.1 3472256 R 272560 CDS YP_109497.1 53720511 3094756 complement(3472953..3473432) 1 NC_006350.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 3473432 dtd 3094756 dtd Burkholderia pseudomallei K96243 D-tyrosyl-tRNA(Tyr) deacylase YP_109497.1 3472953 R 272560 CDS YP_109498.1 53720512 3091718 complement(3473503..3474744) 1 NC_006350.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 3474744 tyrZ 3091718 tyrZ Burkholderia pseudomallei K96243 tyrosyl-tRNA synthetase YP_109498.1 3473503 R 272560 CDS YP_109499.1 53720513 3092869 3474875..3476086 1 NC_006350.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3476086 anmK 3092869 anmK Burkholderia pseudomallei K96243 anhydro-N-acetylmuramic acid kinase YP_109499.1 3474875 D 272560 CDS YP_109500.1 53720514 3092870 complement(3476197..3476895) 1 NC_006350.1 Similar to Escherichia coli hypothetical GST-like protein YfcG or b2302 SWALL:YFCG_ECOLI (SWALL:P77526) (215 aa) fasta scores: E(): 2.6e-47, 59.61% id in 208 aa, and to Xanthomonas campestris glutathione S-transferase xcc3962 SWALL:AAM43183 (EMBL:AE012517) (229 aa) fasta scores: E(): 7.8e-54, 60.69% id in 229 aa. Note: Also similar to the upstream CDS BPSL1749 (235 aa) fasta scores: E(): 1.5e-27, 44.231% identity in 208 aa overlap; glutathione S-transferase-like protein 3476895 3092870 BPSL2906 Burkholderia pseudomallei K96243 glutathione S-transferase-like protein YP_109500.1 3476197 R 272560 CDS YP_109501.1 53720515 3091916 complement(3476900..3477604) 1 NC_006350.1 Similar to Escherichia coli hypothetical GST-like protein YfcG or b2302 SWALL:YFCG_ECOLI (SWALL:P77526) (215 aa) fasta scores: E(): 6.6e-25, 41.7% id in 211 aa, and to Xanthomonas axonopodis glutathione S-transferase xac4047 SWALL:Q8PFD6 (EMBL:AE012053) (229 aa) fasta scores: E(): 5.2e-31, 45.45% id in 231 aa. Note: Also similar to the downstream CDS BPSL2906 (233 aa) fasta scores: E(): 1.9e-24, 39.224% identity in 232 aa overla; glutathione S-transferase like protein 3477604 3091916 BPSL2907 Burkholderia pseudomallei K96243 glutathione S-transferase like protein YP_109501.1 3476900 R 272560 CDS YP_109502.1 53720516 3091917 3477697..3478599 1 NC_006350.1 Similar to Xylella fastidiosa transcriptional regulator xf1254 SWALL:Q9PDX5 (EMBL:AE003959) (280 aa) fasta scores: E(): 1.7e-34, 42.22% id in 270 aa, and to Streptomyces antibioticus AraC-like transcription regulator SWALL:ARAL_STRAT (SWALL:Q03320) (303 aa) fasta scores: E(): 1.7e-15, 37.44% id in 219 aa; AraC family transcriptional regulator 3478599 3091917 BPSL2908 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_109502.1 3477697 D 272560 CDS YP_109503.1 53720517 3093015 complement(3478769..3479137) 1 NC_006350.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 3479137 3093015 BPSL2909 Burkholderia pseudomallei K96243 iron-sulfur cluster insertion protein ErpA YP_109503.1 3478769 R 272560 CDS YP_109504.1 53720518 3092003 complement(3479344..3479736) 1 NC_006350.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 3479736 rpsI 3092003 rpsI Burkholderia pseudomallei K96243 30S ribosomal protein S9 YP_109504.1 3479344 R 272560 CDS YP_109505.1 53720519 3093602 complement(3479748..3480176) 1 NC_006350.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 3480176 rplM 3093602 rplM Burkholderia pseudomallei K96243 50S ribosomal protein L13 YP_109505.1 3479748 R 272560 CDS YP_109506.1 53720520 3093016 3480846..3481268 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YhfA or b3356 or c4131 or z4717 or ecs4207 SWALL:YHFA_ECOLI (SWALL:P24246) (134 aa) fasta scores: E(): 3.5e-24, 48.57% id in 140 aa, and to Ralstonia solanacearum hypothetical protein rsc0489 or rs05752 SWALL:Q8Y247 (EMBL:AL646059) (148 aa) fasta scores: E(): 2.5e-42, 78.98% id in 138 aa; OsmC-like protein 3481268 3093016 BPSL2912 Burkholderia pseudomallei K96243 OsmC-like protein YP_109506.1 3480846 D 272560 CDS YP_109507.1 53720521 3094601 complement(3481935..3482777) 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein rsc0488 or rs05751 SWALL:Q8Y248 (EMBL:AL646059) (270 aa) fasta scores: E(): 6.2e-45, 52.65% id in 264 aa; hypothetical protein 3482777 3094601 BPSL2913 Burkholderia pseudomallei K96243 hypothetical protein YP_109507.1 3481935 R 272560 CDS YP_109508.1 53720522 3093494 complement(3483172..3484230) 1 NC_006350.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 3484230 pyrC 3093494 pyrC Burkholderia pseudomallei K96243 dihydroorotase YP_109508.1 3483172 R 272560 CDS YP_109509.1 53720523 3094602 3484440..3485354 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc0485 or rs04388 SWALL:Q8Y251 (EMBL:AL646059) (276 aa) fasta scores: E(): 6.8e-84, 74.81% id in 266 aa, and to Neisseria meningitidis hypothetical protein nma0646 SWALL:Q9JVW6 (EMBL:AL162753) (280 aa) fasta scores: E(): 1.3e-57, 55.88% id in 272 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein 3485354 3094602 BPSL2915 Burkholderia pseudomallei K96243 hypothetical protein YP_109509.1 3484440 D 272560 CDS YP_109510.1 53720524 3094751 complement(3485801..3486139) 1 NC_006350.1 hypothetical protein 3486139 3094751 BPSL2916 Burkholderia pseudomallei K96243 hypothetical protein YP_109510.1 3485801 R 272560 CDS YP_109511.1 53720525 3094752 complement(3486496..3486915) 1 NC_006350.1 Similar to Pseudomonas putida heat shock protein, pp3313 SWALL:AAN68920 (EMBL:AE016786) (123 aa) fasta scores: E(): 2.3e-12, 43.26% id in 104 aa, and to Rhizobium loti small heat shock protein mlr4721 SWALL:Q98DG0 (EMBL:AP003004) (159 aa) fasta scores: E(): 4e-09, 41.17% id in 102 aa. Note: Also similar to BPSL1322 (134 aa) fasta scores: E(): 3.1e-25, 57.576% identity in 132 aa overlap; heat shock Hsp20-like protein 3486915 3094752 BPSL2917 Burkholderia pseudomallei K96243 heat shock Hsp20-like protein YP_109511.1 3486496 R 272560 CDS YP_109512.1 53720526 3092837 complement(3486981..3487421) 1 NC_006350.1 Similar to Pseudomonas putida heat shock protein, Hsp20 family pp3314 SWALL:AAN68921 (EMBL:AE016786) (151 aa) fasta scores: E(): 1.8e-18, 39.18% id in 148 aa, and to Thermotoga maritima small heat shock protein ShsP SWALL:Q9ZFD1 (EMBL:AF106330) (142 aa) fasta scores: E(): 8.1e-10, 36.23% id in 138 aa. Note: Also similar to BPSL1323 (199 aa) fasta scores: E(): 1.6e-33, 59.333% identity in 150 aa overlap; heat shock Hsp20-like protein 3487421 3092837 BPSL2918 Burkholderia pseudomallei K96243 heat shock Hsp20-like protein YP_109512.1 3486981 R 272560 CDS YP_109513.1 53720527 3094581 3487884..3488201 1 NC_006350.1 Similar to Chromatium vinosum 10 kDa chaperonin GroS or GroES SWALL:CH10_CHRVI (SWALL:P31295) (96 aa) fasta scores: E(): 2.7e-20, 57.89% id in 95 aa, and to Methylovorus sp. 10 kDa chaperonin GroS or GroES SWALL:Q9WWL3 (EMBL:AF152236) (105 aa) fasta scores: E(): 1.3e-24, 66.66% id in 105 aa. Note: Also similar to BPSL2698 (98 aa) fasta scores: E(): 4.5e-21, 59.375% identity in 96 aa overlap; molecular chaperone GroES 3488201 groES2 3094581 groES2 Burkholderia pseudomallei K96243 molecular chaperone GroES YP_109513.1 3487884 D 272560 CDS YP_109514.1 53720528 3092838 3488496..3488750 1 NC_006350.1 hypothetical protein 3488750 3092838 BPSL2920 Burkholderia pseudomallei K96243 hypothetical protein YP_109514.1 3488496 D 272560 CDS YP_109515.1 53720529 3092767 complement(3488860..3489585) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 glutamate/aspartate transport ATP-binding protein GltL or b0652 or z0802 or ecs0691 SWALL:GLTL_ECOLI (SWALL:P41076) (241 aa) fasta scores: E(): 3.5e-64, 83.81% id in 241 aa, and to Yersinia pestis glutamate/aspartate transport ATP-binding protein ypo2612 SWALL:Q8ZDF6 (EMBL:AJ414153) (242 aa) fasta scores: E(): 1.5e-64, 84.64% id in 241 aa; glutamate/aspartate transport ATP-binding protein 3489585 gltL 3092767 gltL Burkholderia pseudomallei K96243 glutamate/aspartate transport ATP-binding protein YP_109515.1 3488860 R 272560 CDS YP_109516.1 53720530 3093708 complement(3489582..3490259) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glutamate/aspartate transport system permease GltK or b0653 or c0737 or z0803 or ecs0692 SWALL:GLTK_ECOLI (SWALL:P41075) (224 aa) fasta scores: E(): 6.2e-58, 72.07% id in 222 aa, and to Salmonella typhi glutamate/aspartate transport system permease sty0708 SWALL:Q8Z8G9 (EMBL:AL627267) (224 aa) fasta scores: E(): 5.4e-59, 72.97% id in 222 aa; glutamate/aspartate transport system permease 3490259 gltK 3093708 gltK Burkholderia pseudomallei K96243 glutamate/aspartate transport system permease YP_109516.1 3489582 R 272560 CDS YP_109517.1 53720531 3093707 complement(3490259..3490999) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O6 glutamate/aspartate transport system permease GltJ or b0654 or c0738 SWALL:GLTJ_ECOLI (SWALL:P41074) (246 aa) fasta scores: E(): 8.3e-62, 63.56% id in 247 aa, and to Yersinia pestis glutamate/aspartate transport system permease ypo2614 SWALL:Q8ZDF4 (EMBL:AJ414153) (246 aa) fasta scores: E(): 2.5e-64, 66.39% id in 247 aa; glutamate/aspartate transport system permease 3490999 gltJ 3093707 gltJ Burkholderia pseudomallei K96243 glutamate/aspartate transport system permease YP_109517.1 3490259 R 272560 CDS YP_109518.1 53720532 3092902 complement(3491082..3491984) 1 NC_006350.1 Similar to Escherichia coli glutamate/aspartate periplasmic binding protein precursor GltI or b0655 SWALL:GLTI_ECOLI (SWALL:P37902) (302 aa) fasta scores: E(): 8.4e-74, 67.88% id in 302 aa, and to Salmonella typhimurium glutamate/aspartate periplasmic binding protein precursor stm0665 SWALL:GLTI_SALTY (SWALL:Q9ZF60) (302 aa) fasta scores: E(): 2.4e-74, 68.64% id in 303 aa; glutamate/aspartate periplasmic binding protein 3491984 gltI 3092902 gltI Burkholderia pseudomallei K96243 glutamate/aspartate periplasmic binding protein YP_109518.1 3491082 R 272560 CDS YP_109519.1 53720533 3094709 complement(3492208..3493512) 1 NC_006350.1 Similar to Bacillus subtilis NAD-specific glutamate dehydrogenase GudB SWALL:GUDB_BACSU (SWALL:P50735) (426 aa) fasta scores: E(): 2.1e-70, 47.51% id in 402 aa, and to Salmonella typhimurium homolog of glutamic dehyrogenase stm1795 SWALL:Q8ZP21 (EMBL:AE008780) (441 aa) fasta scores: E(): 2.4e-109, 64.67% id in 419 aa; glutamate dehydrogenase 3493512 3094709 BPSL2925 Burkholderia pseudomallei K96243 glutamate dehydrogenase YP_109519.1 3492208 R 272560 CDS YP_109520.1 53720534 3094710 complement(3493893..3494843) 1 NC_006350.1 Similar to Ralstonia solanacearum transcription regulator protein rsc0479 or rs04416 SWALL:Q8Y257 (EMBL:AL646059) (314 aa) fasta scores: E(): 2.6e-70, 64.55% id in 316 aa, and to Rhizobium meliloti transcriptional regulator ra0049 or sma0097 SWALL:Q930Z5 (EMBL:AE007199) (313 aa) fasta scores: E(): 3.9e-27, 37.8% id in 328 aa; LysR family transcriptional regulator 3494843 3094710 BPSL2926 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_109520.1 3493893 R 272560 CDS YP_109521.1 53720535 3092269 3495261..3496718 1 NC_006350.1 Similar to Bacillus subtilis nitrate transporter NasA SWALL:NASA_BACSU (SWALL:P42432) (421 aa) fasta scores: E(): 3.2e-19, 34.09% id in 352 aa, and to Aquifex aeolicus nitrate transporter NasA or aq_215 SWALL:O66589 (EMBL:AE000678) (475 aa) fasta scores: E(): 2.3e-82, 53.53% id in 439 aa. Note: This CDS is longer in its N-terminal region than most of its database matches. It has an alternative start codon at residue 18; nitrate transporter 3496718 3092269 BPSL2927 Burkholderia pseudomallei K96243 nitrate transporter YP_109521.1 3495261 D 272560 CDS YP_109522.1 53720536 3093830 3496763..3498214 1 NC_006350.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 3498214 purB 3093830 purB Burkholderia pseudomallei K96243 adenylosuccinate lyase YP_109522.1 3496763 D 272560 CDS YP_109523.1 53720537 3092270 complement(3498335..3498853) 1 NC_006350.1 Similar to Escherichia coli thermoresistant gluconokinase GntK or b3437 SWALL:GNTK_ECOLI (SWALL:P46859) (174 aa) fasta scores: E(): 1.9e-21, 43.31% id in 157 aa, and to Ralstonia solanacearum probable thermoresistant gluconokinase rsc0441 or rs04466 SWALL:Q8Y295 (EMBL:AL646059) (169 aa) fasta scores: E(): 2.1e-27, 49.68% id in 161 aa; thermoresistant gluconokinase 3498853 3092270 BPSL2929 Burkholderia pseudomallei K96243 thermoresistant gluconokinase YP_109523.1 3498335 R 272560 CDS YP_109524.1 53720538 3092428 complement(3498867..3500228) 1 NC_006350.1 Similar to Escherichia coli high-affinity gluconate transporter GntT or UsgA or GntM or b3415 SWALL:GNTT_ECOLI (SWALL:P39835) (437 aa) fasta scores: E(): 1.3e-68, 45.33% id in 450 aa, and to Pseudomonas aeruginosa gluconate permease pa2322 SWALL:GNUT_PSEAE (SWALL:Q9ZIJ1) (450 aa) fasta scores: E(): 4.7e-83, 52.53% id in 453 aa; gluconate permease 3500228 3092428 BPSL2930 Burkholderia pseudomallei K96243 gluconate permease YP_109524.1 3498867 R 272560 CDS YP_109525.1 53720539 3092733 complement(3500448..3501077) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 KHG/KDPG aldolase [includes: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) (2-keto-4-hydroxyglutarate aldolase) (khg-aldolase); 2- dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) (phospho-2- dehydro-3-deoxygluconate aldolase) (phospho-2-keto-3-deoxygluconate aldolase) (2-keto-3-deoxy-6-phosphogluconate aldolase) (kdpg- aldolase)] Eda or Hga or KdgA or b1850 or c2263 or z2902 or ecs2560 SWALL:ALKH_ECOLI (SWALL:P10177) (213 aa) fasta scores: E(): 6.8e-31, 44.82% id in 203 aa, and to Neisseria meningitidis 2-keto-4-hydroxyglutarate aldolase Eda or nma1611 or nmb1394 SWALL:Q9JR44 (EMBL:AL162756) (212 aa) fasta scores: E(): 1.3e-35, 50.74% id in 201 aa; KHG/KDPG aldolase 3501077 eda 3092733 eda Burkholderia pseudomallei K96243 KHG/KDPG aldolase YP_109525.1 3500448 R 272560 CDS YP_109526.1 53720540 3093431 complement(3501096..3502949) 1 NC_006350.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 3502949 edd 3093431 edd Burkholderia pseudomallei K96243 phosphogluconate dehydratase YP_109526.1 3501096 R 272560 CDS YP_109527.1 53720541 3092429 3503247..3504245 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa5438 SWALL:Q9HTC8 (EMBL:AE004956) (293 aa) fasta scores: E(): 2.9e-39, 44.29% id in 289 aa, and to Escherichia coli hex regulon repressor HexR or b1853 SWALL:HEXR_ECOLI (SWALL:P46118) (289 aa) fasta scores: E(): 1.4e-32, 40.58% id in 276 aa; regulatory protein 3504245 3092429 BPSL2933 Burkholderia pseudomallei K96243 regulatory protein YP_109527.1 3503247 D 272560 CDS YP_109528.1 53720542 3091653 complement(3504716..3505138) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2740 or rs00114 SWALL:Q8XVT7 (EMBL:AL646071) (140 aa) fasta scores: E(): 3.1e-32, 62.85% id in 140 aa, and to Neisseria meningitidis conserved hypothetical inner membrane protein nma2177 SWALL:Q9JSR1 (EMBL:AL162758) (145 aa) fasta scores: E(): 2.9e-22, 48.25% id in 143 aa; hypothetical protein 3505138 3091653 BPSL2934 Burkholderia pseudomallei K96243 hypothetical protein YP_109528.1 3504716 R 272560 CDS YP_109529.2 161723197 3094010 complement(3505156..3506427) 1 NC_006350.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 3506427 proA 3094010 proA Burkholderia pseudomallei K96243 gamma-glutamyl phosphate reductase YP_109529.2 3505156 R 272560 CDS YP_109530.1 53720544 3091654 complement(3506570..3507658) 1 NC_006350.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 3507658 holA 3091654 holA Burkholderia pseudomallei K96243 DNA polymerase III subunit delta YP_109530.1 3506570 R 272560 CDS YP_109531.1 53720545 3094183 complement(3507704..3508255) 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O6 rare lipoprotein B precursor RlpB or b0641 or c0732 SWALL:RLPB_ECOLI (SWALL:P10101) (193 aa) fasta scores: E(): 0.06, 26.45% id in 189 aa, and to Ralstonia solanacearum lipoprotein B transmembrane RlpB or rsc2743 or rs00111 SWALL:Q8XVT4 (EMBL:AL646071) (169 aa) fasta scores: E(): 8e-17, 43.29% id in 164 aa; lipoprotein 3508255 3094183 BPSL2937 Burkholderia pseudomallei K96243 lipoprotein YP_109531.1 3507704 R 272560 CDS YP_109532.1 53720546 3094550 complement(3508297..3510891) 1 NC_006350.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3510891 leuS 3094550 leuS Burkholderia pseudomallei K96243 leucyl-tRNA synthetase YP_109532.1 3508297 R 272560 CDS YP_109533.1 53720547 3094184 complement(3511066..3511578) 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 biopolymer transport ExbD protein or b3005 or c3740 or z4358 or ecs3889 SWALL:EXBD_ECOLI (SWALL:P18784) (141 aa) fasta scores: E(): 2.6e-06, 33.87% id in 124 aa, and to Xanthomonas campestris biopolymer transport ExbD1 protein or xcc0010 SWALL:EXB1_XANCP (SWALL:O34259) (140 aa) fasta scores: E(): 4.3e-11, 44.11% id in 136 aa. Note: This CDS is longer in its -terminal region than most of its database matches; transport-related membrane protein 3511578 3094184 BPSL2939 Burkholderia pseudomallei K96243 transport-related membrane protein YP_109533.1 3511066 R 272560 CDS YP_109534.1 53720548 3093633 complement(3511619..3512326) 1 NC_006350.1 Similar to Neisseria meningitidis biopolymer transport protein ExbB or nma1984 or nmb1729 SWALL:EXBB_NEIMA (SWALL:P57027) (220 aa) fasta scores: E(): 3.1e-26, 46.19% id in 210 aa, and to Escherichia coli, and Escherichia coli O157:H7 TolQ protein or Fii or b0737 or z0905 or ecs0772 SWALL:TOLQ_ECOLI (SWALL:P05828) (230 aa) fasta scores: E(): 1.8e-13, 32.42% id in 219 aa; transport-related membrane protein 3512326 3093633 BPSL2940 Burkholderia pseudomallei K96243 transport-related membrane protein YP_109534.1 3511619 R 272560 CDS YP_109535.1 53720549 3094347 complement(3512355..3513161) 1 NC_006350.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 3513161 dapB 3094347 dapB Burkholderia pseudomallei K96243 dihydrodipicolinate reductase YP_109535.1 3512355 R 272560 CDS YP_109536.1 53720550 3093811 complement(3513232..3514056) 1 NC_006350.1 Identical in its N-terminal region to Burkholderia pseudomallei outer membrane lipoprotein OmlA (Fragment) SWALL:Q9F9X1 (EMBL:AF153356) (133 aa) fasta scores: E(): 5.2e-31, 100% id in 133 aa, and simiar in its full length to Pseudomonas fluorescens outer membrane lipoprotein precursor OmlA or OprX SWALL:OMLA_PSEFL (SWALL:O68564) (175 aa) fasta scores: E(): 0.00012, 32.38% id in 176 aa; outer membrane protein 3514056 omlA 3093811 omlA Burkholderia pseudomallei K96243 outer membrane protein YP_109536.1 3513232 R 272560 CDS YP_109537.1 53720551 3091814 3514171..3514599 1 NC_006350.1 Previously sequenced as Burkholderia pseudomallei ferric uptake regulator Fur SWALL:Q9Z5Z9 (EMBL:AF117238) (142 aa) fasta scores: E(): 8.2e-57, 100% id in 142 aa. Highly similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ferric uptake regulation protein Fur or b0683 or c0770 or z0831 or ecs0714 SWALL:FUR_ECOLI (SWALL:P06975) (148 aa) fasta scores: E(): 8.1e-29, 55% id in 140 aa; ferric uptake regulator 3514599 fur 3091814 fur Burkholderia pseudomallei K96243 ferric uptake regulator YP_109537.1 3514171 D 272560 CDS YP_109538.1 53720552 3093634 complement(3514736..3515260) 1 NC_006350.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 3515260 3093634 BPSL2944 Burkholderia pseudomallei K96243 ureidoglycolate hydrolase YP_109538.1 3514736 R 272560 CDS YP_109539.1 53720553 3094036 complement(3515274..3516284) 1 NC_006350.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase 3516284 3094036 BPSL2945 Burkholderia pseudomallei K96243 allantoicase YP_109539.1 3515274 R 272560 CDS YP_109540.1 53720554 3094344 complement(3516422..3517744) 1 NC_006350.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 3517744 dctA 3094344 dctA Burkholderia pseudomallei K96243 C4-dicarboxylate transporter DctA YP_109540.1 3516422 R 272560 CDS YP_109541.1 53720555 3094037 3517990..3518682 1 NC_006350.1 Similar to Erwinia chrysanthemi exu regulon transcriptional regulator ExuR SWALL:EXUR_ERWCH (SWALL:Q9X9E0) (259 aa) fasta scores: E(): 1.8e-13, 31.79% id in 217 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2102 or rs01502 SWALL:Q8XXL1 (EMBL:AL646068) (254 aa) fasta scores: E(): 1.4e-17, 35.16% id in 236 aa; GntR family transcriptional regulator 3518682 3094037 BPSL2947 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_109541.1 3517990 D 272560 CDS YP_109542.1 53720556 3092007 complement(3519305..3520240) 1 NC_006350.1 controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR 3520240 cynR 3092007 cynR Burkholderia pseudomallei K96243 DNA-binding transcriptional regulator CynR YP_109542.1 3519305 R 272560 CDS YP_109543.1 53720557 3092530 3520355..3521014 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 carbonic anhydrase CynT or b0339 or z0435 or ecs0392 SWALL:CYNT_ECOLI (SWALL:P17582) (219 aa) fasta scores: E(): 4e-62, 72.6% id in 219 aa, and to Pseudomonas aeruginosa carbonate dehydratase pa2053 SWALL:Q9I262 (EMBL:AE004631) (220 aa) fasta scores: E(): 1e-60, 73.81% id in 210 aa; carbonic anhydrase 3521014 cynT 3092530 cynT Burkholderia pseudomallei K96243 carbonic anhydrase YP_109543.1 3520355 D 272560 CDS YP_109544.1 53720558 3092008 3521101..3521571 1 NC_006350.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 3521571 cynS 3092008 cynS Burkholderia pseudomallei K96243 cyanate hydratase YP_109544.1 3521101 D 272560 CDS YP_109545.1 53720559 3092833 3521744..3522943 1 NC_006350.1 Similar to Xanthomonas axonopodis MFS transporter xac0509 SWALL:AAM35398 (EMBL:AE011677) (396 aa) fasta scores: E(): 2e-57, 46.78% id in 389 aa, and to Escherichia coli hypothetical protein YgaY or b2680/b2681 SWALL:YGAY_ECOLI (SWALL:P76628) (394 aa) fasta scores: E(): 4.8e-54, 42.15% id in 389 aa; hypothetical protein 3522943 3092833 BPSL2951 Burkholderia pseudomallei K96243 hypothetical protein YP_109545.1 3521744 D 272560 CDS YP_109546.1 53720560 3092714 complement(3523351..3524361) 1 NC_006350.1 Similar to Bacillus subtilis glyceraldehyde 3-phosphate dehydrogenase 1 AapA or Gap SWALL:G3P1_BACSU (SWALL:P09124) (334 aa) fasta scores: E(): 2.7e-71, 60.06% id in 333 aa, and to Alcaligenes eutrophus glyceraldehyde 3-phosphate dehydrogenase, plasmid CbbGP SWALL:G3PP_ALCEU (SWALL:P50322) (336 aa) fasta scores: E(): 5.1e-112, 84.52% id in 336 aa; glyceraldehyde 3-phosphate dehydrogenase 1 3524361 gapA 3092714 gapA Burkholderia pseudomallei K96243 glyceraldehyde 3-phosphate dehydrogenase 1 YP_109546.1 3523351 R 272560 CDS YP_109547.1 53720561 3094803 complement(3524452..3526479) 1 NC_006350.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 3526479 tktA 3094803 tktA Burkholderia pseudomallei K96243 transketolase YP_109547.1 3524452 R 272560 CDS YP_109548.1 53720562 3092834 3526742..3527599 1 NC_006350.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3527599 speE 3092834 speE Burkholderia pseudomallei K96243 spermidine synthase YP_109548.1 3526742 D 272560 CDS YP_109549.1 53720563 3094728 3527639..3528055 1 NC_006350.1 Similar to Mycobacterium tuberculosis hypothetical protein rv0887c or mt0910 or mtcy31.15C SWALL:Y887_MYCTU (SWALL:Q10548) (170 aa) fasta scores: E(): 7.2e-10, 33.84% id in 130 aa, and to Ralstonia solanacearum hypothetical protein rsc2762 or rs00092 SWALL:Q8XVR7 (EMBL:AL646071) (141 aa) fasta scores: E(): 1.3e-30, 59.39% id in 133 aa; glyoxalase/bleomycin resistance protein/dioxygenase 3528055 3094728 BPSL2955 Burkholderia pseudomallei K96243 glyoxalase/bleomycin resistance protein/dioxygenase YP_109549.1 3527639 D 272560 CDS YP_109550.2 229269497 3094729 3528052..3528819 1 NC_006350.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3528819 3094729 BPSL2956 Burkholderia pseudomallei K96243 16S ribosomal RNA methyltransferase RsmE YP_109550.2 3528052 D 272560 CDS YP_109551.1 53720565 3094052 complement(3529221..3529784) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein RSC2765 or RS00089 SWALL:Q8XVR4 (EMBL:AL646071) (198 aa) fasta scores: E(): 9e-39, 60.41% id in 192 aa. C-terminal region is similar to Xylella fastidiosa conserved hypothetical protein SWALL:Q87A41 (EMBL:AE012560) (138 aa) fasta scores: E(): 0.00017, 31.2% id in 125 aa. Possible alternative translational start site after codon 55; hypothetical protein 3529784 3094052 BPSL2957 Burkholderia pseudomallei K96243 hypothetical protein YP_109551.1 3529221 R 272560 CDS YP_109552.1 53720566 3094053 complement(3529801..3530232) 1 NC_006350.1 Similar to Streptomyces aureofaciens guanyl-specific ribonuclease SA3 precursor RnaSA3 SWALL:RNS3_STRAU (SWALL:P30289) (141 aa) fasta scores: E(): 1.1e-14, 44.36% id in 133 aa, and to Ralstonia solanacearum probable guanyl-specific ribonuclease precursor signal peptide protein rsc2766 or rs00088 SWALL:Q8XVR3 (EMBL:AL646071) (143 aa) fasta scores: E(): 3.5e-21, 54.88% id in 133 aa; exported ribonuclease 3530232 3094053 BPSL2958 Burkholderia pseudomallei K96243 exported ribonuclease YP_109552.1 3529801 R 272560 CDS YP_109553.1 53720567 3093937 complement(3530561..3532870) 1 NC_006350.1 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 3532870 maeB 3093937 maeB Burkholderia pseudomallei K96243 malic enzyme YP_109553.1 3530561 R 272560 CDS YP_109554.1 53720568 3093144 3533072..3534073 1 NC_006350.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 3534073 3093144 BPSL2960 Burkholderia pseudomallei K96243 thiamine monophosphate kinase YP_109554.1 3533072 D 272560 CDS YP_109555.1 53720569 3093145 3534207..3534680 1 NC_006350.1 Similar to Escherichia coli phosphatidylglycerophosphatase A PgpA or b0418 SWALL:PGPA_ECOLI (SWALL:P18200) (172 aa) fasta scores: E(): 7.2e-20, 40.97% id in 144 aa, and to Ralstonia solanacearum probable phosphatidyl-glycerophosphatase hydrolase transmembrane protein rsc2769 or rs00078 SWALL:Q8XVR0 (EMBL:AL646071) (174 aa) fasta scores: E(): 4.8e-35, 56.32% id in 158 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; phosphatidylglycerophosphatase 3534680 3093145 BPSL2961 Burkholderia pseudomallei K96243 phosphatidylglycerophosphatase YP_109555.1 3534207 D 272560 CDS YP_109556.1 53720570 3093382 3534724..3535224 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O6 protein YgaD or b2700 or c3254 SWALL:YGAD_ECOLI (SWALL:P41053) (165 aa) fasta scores: E(): 1.1e-26, 54.48% id in 156 aa, and to Ralstonia solanacearum hypothetical protein rsc2770 or rs00077 SWALL:Q8XVQ9 (EMBL:AL646071) (166 aa) fasta scores: E(): 1.7e-37, 65.45% id in 165 aa; competence-damaged-like protein 3535224 3093382 BPSL2962 Burkholderia pseudomallei K96243 competence-damaged-like protein YP_109556.1 3534724 D 272560 CDS YP_109557.1 53720571 3093383 complement(3535507..3536334) 1 NC_006350.1 OMP decarboxylase; OMPDCase; OMPdecase; type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 3536334 pyrF 3093383 pyrF Burkholderia pseudomallei K96243 orotidine 5'-phosphate decarboxylase YP_109557.1 3535507 R 272560 CDS YP_109558.1 53720572 3092985 complement(3536431..3537414) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2754 or rs00100 SWALL:Q8XVS5 (EMBL:AL646071) (296 aa) fasta scores: E(): 9.1e-52, 49.31% id in 292 aa, and to Rhizobium loti hypothetical protein mlr7196 SWALL:Q986V3 (EMBL:AP003011) (308 aa) fasta scores: E(): 4.7e-33, 35.83% id in 293 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; epimerase 3537414 3092985 BPSL2964 Burkholderia pseudomallei K96243 epimerase YP_109558.1 3536431 R 272560 CDS YP_109559.1 53720573 3092986 complement(3537551..3538357) 1 NC_006350.1 Similar to Pseudomonas paucimobilis 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX SWALL:LINX_PSEPA (SWALL:P50198) (250 aa) fasta scores: E(): 3.4e-20, 34.41% id in 247 aa, and to Rhizobium meliloti probable oxidoreductase r00826 or smc00880 SWALL:Q92RN6 (EMBL:AL591785) (256 aa) fasta scores: E(): 5.6e-39, 48.19% id in 249 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; dehydrogenase 3538357 3092986 BPSL2965 Burkholderia pseudomallei K96243 dehydrogenase YP_109559.1 3537551 R 272560 CDS YP_109560.1 53720574 3094069 complement(3538396..3539400) 1 NC_006350.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 3539400 araH 3094069 araH Burkholderia pseudomallei K96243 L-arabinose transporter permease YP_109560.1 3538396 R 272560 CDS YP_109561.2 161723196 3094068 complement(3539515..3541026) 1 NC_006350.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 3541026 araG 3094068 araG Burkholderia pseudomallei K96243 L-arabinose transporter ATP-binding protein YP_109561.2 3539515 R 272560 CDS YP_109562.1 53720576 3092606 complement(3541115..3542110) 1 NC_006350.1 Similar to Ralstonia solanacearum probable L-arabinose-binding periplasmic rsc2758 or rs00096 SWALL:Q8XVS1 (EMBL:AL646071) (331 aa) fasta scores: E(): 1.5e-86, 71.56% id in 327 aa, and to Escherichia coli L-arabinose-binding periplasmic protein precursor AraF or b1901 SWALL:ARAF_ECOLI (SWALL:P02924) (329 aa) fasta scores: E(): 5.3e-57, 48.93% id in 327 aa; L-arabinose transport system, exported protein 3542110 3092606 BPSL2968 Burkholderia pseudomallei K96243 L-arabinose transport system, exported protein YP_109562.1 3541115 R 272560 CDS YP_109563.1 53720577 3092607 complement(3542240..3543019) 1 NC_006350.1 Similar to Rhizobium loti probable oxidoreductase mll7083 SWALL:Q987E5 (EMBL:AP003010) (258 aa) fasta scores: E(): 1.8e-54, 61.86% id in 257 aa, and to Escherichia coli oxidoreductase UcpA or b2426 SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) fasta scores: E(): 1.6e-27, 40% id in 260 aa; short chain dehydrogenase 3543019 3092607 BPSL2969 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_109563.1 3542240 R 272560 CDS YP_109564.1 53720578 3093435 complement(3543016..3543645) 1 NC_006350.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 3543645 3093435 BPSL2970 Burkholderia pseudomallei K96243 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_109564.1 3543016 R 272560 CDS YP_109565.1 53720579 3093436 complement(3543743..3544756) 1 NC_006350.1 Similar to Rhizobium meliloti 2-dehydro-3-deoxygalactonokinase ra0372 or sma0705 SWALL:Q92ZS7 (EMBL:AE007229) (324 aa) fasta scores: E(): 8.4e-24, 38.22% id in 327 aa, and to Escherichia coli 2-dehydro-3-deoxygalactonokinase DgoK or b3693 SWALL:DGOK_ECOLI (SWALL:P31459) (292 aa) fasta scores: E(): 1.3e-09, 34.16% id in 319 aa; galactonokinase 3544756 3093436 BPSL2971 Burkholderia pseudomallei K96243 galactonokinase YP_109565.1 3543743 R 272560 CDS YP_109566.1 53720580 3093994 complement(3544753..3545670) 1 NC_006350.1 Similar to Escherichia coli transcriptional regulator KdgR or b1827 SWALL:KDGR_ECOLI (SWALL:P76268) (263 aa) fasta scores: E(): 6.3e-18, 33.46% id in 263 aa, and CFT073 transcriptional regulator c4779 SWALL:AAN83212 (EMBL:AE016770) (284 aa) fasta scores: E(): 1.2e-27, 56.64% id in 256 aa; IclR family transcriptional regulator 3545670 3093994 BPSL2972 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_109566.1 3544753 R 272560 CDS YP_109567.1 53720581 3093995 complement(3545935..3546366) 1 NC_006350.1 hypothetical protein 3546366 3093995 BPSL2973 Burkholderia pseudomallei K96243 hypothetical protein YP_109567.1 3545935 R 272560 CDS YP_109568.1 53720582 3092542 complement(3546427..3548061) 1 NC_006350.1 Similar to Ralstonia solanacearum probable carboxypeptidase rsc1003 or rs04289 SWALL:Q8Y0P0 (EMBL:AL646062) (543 aa) fasta scores: E(): 1.1e-50, 40.29% id in 546 aa, and to Caulobacter crescentus hypothetical protein cc3418 SWALL:Q9A2Y8 (EMBL:AE006002) (504 aa) fasta scores: E(): 1.8e-19, 30.4% id in 546 aa; lipoprotein 3548061 3092542 BPSL2974 Burkholderia pseudomallei K96243 lipoprotein YP_109568.1 3546427 R 272560 CDS YP_109569.1 53720583 3092543 complement(3548521..3549291) 1 NC_006350.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 3549291 mtgA 3092543 mtgA Burkholderia pseudomallei K96243 monofunctional biosynthetic peptidoglycan transglycosylase YP_109569.1 3548521 R 272560 CDS YP_109570.1 53720584 3093727 complement(3549312..3550190) 1 NC_006350.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 3550190 aroE 3093727 aroE Burkholderia pseudomallei K96243 shikimate 5-dehydrogenase YP_109570.1 3549312 R 272560 CDS YP_109571.1 53720585 3093843 complement(3550187..3552265) 1 NC_006350.1 Similar to Escherichia coli exoribonuclease II Rnb or b1286 SWALL:RNB_ECOLI (SWALL:P30850) (644 aa) fasta scores: E(): 2e-08, 28.45% id in 355 aa, and to Neisseria meningitidis ribonuclease II-related protein nmb0282 SWALL:Q9K185 (EMBL:AE002385) (626 aa) fasta scores: E(): 2.2e-64, 39.9% id in 644 aa; exoribonuclease II 3552265 3093843 BPSL2977 Burkholderia pseudomallei K96243 exoribonuclease II YP_109571.1 3550187 R 272560 CDS YP_109572.1 53720586 3093844 complement(3552389..3552958) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2781 or rs00066 SWALL:Q8XVP9 (EMBL:AL646071) (210 aa) fasta scores: E(): 2.7e-47, 66.48% id in 188 aa, and to Vibrio cholerae hypothetical protein vc2432 SWALL:Q9KPD8 (EMBL:AE004313) (195 aa) fasta scores: E(): 2.9e-19, 38.5% id in 187 aa; hypothetical protein 3552958 3093844 BPSL2978 Burkholderia pseudomallei K96243 hypothetical protein YP_109572.1 3552389 R 272560 CDS YP_109573.1 53720587 3091976 complement(3552955..3554439) 1 NC_006350.1 Similar to Escherichia coli UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diamino pimelate ligase Mpl or b4233 SWALL:MPL_ECOLI (SWALL:P37773) (457 aa) fasta scores: E(): 5.9e-102, 59.05% id in 464 aa, and to Ralstonia solanacearum probable UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase transmembrane protein mpl or rsc2782 or rs00065 SWALL:Q8XVP8 (EMBL:AL646071) (461 aa) fasta scores: E(): 2.2e-136, 76.18% id in 466 aa. Note: This CDS has an alternative start codon at residue 25; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- me so-diaminopimelate ligase 3554439 mpl 3091976 mpl Burkholderia pseudomallei K96243 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- me so-diaminopimelate ligase YP_109573.1 3552955 R 272560 CDS YP_109574.1 53720588 3093461 3554561..3555217 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein rsc2783 or rs00064 SWALL:Q8XVP7 (EMBL:AL646071) (224 aa) fasta scores: E(): 1e-40, 60.18% id in 221 aa, and to Xanthomonas axonopodis hypothetical protein xac3387 SWALL:AAM38230 (EMBL:AE011985) (216 aa) fasta scores: E(): 2.8e-10, 35.09% id in 208 aa; hypothetical protein 3555217 3093461 BPSL2980 Burkholderia pseudomallei K96243 hypothetical protein YP_109574.1 3554561 D 272560 CDS YP_109575.1 53720589 3093462 3555288..3555770 1 NC_006350.1 Similar to Chlorobium limicola thioredoxin SoxW SWALL:Q8RLW7 (EMBL:AY074395) (185 aa) fasta scores: E(): 9.4e-10, 34.41% id in 154 aa, and to Ralstonia solanacearum thioredoxin-related transmembrane protein rsc2784 or rs00063 SWALL:Q8XVP6 (EMBL:AL646071) (174 aa) fasta scores: E(): 4.3e-25, 49.66% id in 151 aa; thioredoxin-like protein 3555770 3093462 BPSL2981 Burkholderia pseudomallei K96243 thioredoxin-like protein YP_109575.1 3555288 D 272560 CDS YP_109576.1 53720590 3094027 3555966..3556418 1 NC_006350.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3556418 aroQ1 3094027 aroQ1 Burkholderia pseudomallei K96243 3-dehydroquinate dehydratase YP_109576.1 3555966 D 272560 CDS YP_109577.1 53720591 3092969 3556486..3556959 1 NC_006350.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3556959 accB 3092969 accB Burkholderia pseudomallei K96243 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_109577.1 3556486 D 272560 CDS YP_109578.1 53720592 3093093 3557044..3558411 1 NC_006350.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 3558411 accC 3093093 accC Burkholderia pseudomallei K96243 acetyl-CoA carboxylase biotin carboxylase subunit YP_109578.1 3557044 D 272560 CDS YP_109579.1 53720593 3092248 3558414..3559316 1 NC_006350.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 3559316 prmA 3092248 prmA Burkholderia pseudomallei K96243 ribosomal protein L11 methyltransferase YP_109579.1 3558414 D 272560 CDS YP_109580.1 53720594 3093472 3559364..3560773 1 NC_006350.1 Low similarity to Ralstonia solanacearum probable transmembrane protein rsc2789 or rs00058 SWALL:Q8XVP1 (EMBL:AL646071) (473 aa) fasta scores: E(): 8.3e-20, 31.02% id in 490 aa; hypothetical protein 3560773 3093472 BPSL2986 Burkholderia pseudomallei K96243 hypothetical protein YP_109580.1 3559364 D 272560 CDS YP_109581.1 53720595 3092953 3560841..3561344 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella dysenteriae thiol peroxidase Tpx or b1324 or c1796 or z2452 or ecs1903 SWALL:TPX_ECOLI (SWALL:P37901) (167 aa) fasta scores: E(): 5.7e-36, 62.19% id in 164 aa, and to Ralstonia solanacearum probable thiol peroxidase rsc2790 or rs00057 SWALL:TPX_RALSO (SWALL:Q8XVP0) (166 aa) fasta scores: E(): 1.1e-42, 71.25% id in 167 aa; thiol peroxidase 3561344 tpx 3092953 tpx Burkholderia pseudomallei K96243 thiol peroxidase YP_109581.1 3560841 D 272560 CDS YP_109582.1 53720596 3093473 3561445..3562383 1 NC_006350.1 Similar to Bacillus subtilis ribokinase RbsK SWALL:RBSK_BACSU (SWALL:P36945) (293 aa) fasta scores: E(): 7.6e-08, 26.33% id in 262 aa, and to Ralstonia solanacearum sugar kinase transferase rsc2791 or rs00056 SWALL:Q8XVN9 (EMBL:AL646071) (311 aa) fasta scores: E(): 3.9e-78, 64.19% id in 310 aa; sugar kinase 3562383 3093473 BPSL2988 Burkholderia pseudomallei K96243 sugar kinase YP_109582.1 3561445 D 272560 CDS YP_109583.1 53720597 3091739 3562407..3562880 1 NC_006350.1 Similar to Yersinia enterocolitica outer membrane lipoprotein precursor Pcp or PcpY SWALL:PCP_YEREN (SWALL:P31484) (155 aa) fasta scores: E(): 2.4e-12, 40.94% id in 149 aa, and to Escherichia coli, and Escherichia coli O157:H7 outer membrane lipoprotein slyb precursor SlyB or b1641 or z2655 or ecs2350 SWALL:SLYB_ECOLI (SWALL:P55741) (155 aa) fasta scores: E(): 1.3e-10, 36.87% id in 141 aa; lipoprotein 3562880 3091739 BPSL2989 Burkholderia pseudomallei K96243 lipoprotein YP_109583.1 3562407 D 272560 CDS YP_109584.1 53720598 3092482 complement(3563128..3563709) 1 NC_006350.1 Similar to Chlamydia trachomatis histone H1-like protein HC2 HctB SWALL:HC2X_CHLTR (SWALL:Q46397) (221 aa) fasta scores: E(): 2.8e-13, 50.5% id in 200 aa, and to Bordetella pertussis histone H1 SWALL:Q45370 (EMBL:L37438) (182 aa) fasta scores: E(): 7.5e-21, 64.61% id in 195 aa; histone H1-like protein 3563709 hctB 3092482 hctB Burkholderia pseudomallei K96243 histone H1-like protein YP_109584.1 3563128 R 272560 CDS YP_109585.1 53720599 3093394 complement(3564144..3565196) 1 NC_006350.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 3565196 nrdB 3093394 nrdB Burkholderia pseudomallei K96243 ribonucleotide-diphosphate reductase subunit beta YP_109585.1 3564144 R 272560 CDS YP_109586.1 53720600 3091740 complement(3565723..3568710) 1 NC_006350.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3568710 3091740 BPSL2992 Burkholderia pseudomallei K96243 ribonucleotide-diphosphate reductase subunit alpha YP_109586.1 3565723 R 272560 CDS YP_109587.1 53720601 3094504 complement(3569181..3569771) 1 NC_006350.1 Similar to Escherichia coli N-acetylmuramyl-L-alanine amidase AmpD or b0110 SWALL:AMPD_ECOLI (SWALL:P13016) (183 aa) fasta scores: E(): 1.2e-39, 59.88% id in 172 aa, and to Ralstonia solanacearum N-acetylmuramyl-L-alanine amidase rsc2806 or rs00299 SWALL:Q8XVM4 (EMBL:AL646072) (200 aa) fasta scores: E(): 7.8e-50, 61.25% id in 191 aa; N-acetyl-anhydromuranmyl-L-alanine amidase 3569771 ampD 3094504 ampD Burkholderia pseudomallei K96243 N-acetyl-anhydromuranmyl-L-alanine amidase YP_109587.1 3569181 R 272560 CDS YP_109588.1 53720602 3091558 complement(3569768..3570088) 1 NC_006350.1 Weakly similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2809 rsc2809 or rs00296 SWALL:Q8XVM1 (EMBL:AL646072) (86 aa) fasta scores: E(): 2, 32.07% id in 106 aa. C-terminal region is similar to the C-terminus of Pseudomonas putida conserved hypothetical protein pp0621 SWALL:Q88Q74 (EMBL:AE016776) (103 aa) fasta scores: E(): 0.043, 42.59% id in 54 aa; hypothetical protein 3570088 3091558 BPSL2993a Burkholderia pseudomallei K96243 hypothetical protein YP_109588.1 3569768 R 272560 CDS YP_109589.1 53720603 3091559 complement(3570102..3571001) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2810 or rs00295 SWALL:Q8XVM0 (EMBL:AL646072) (303 aa) fasta scores: E(): 4.5e-64, 61.41% id in 311 aa, and to Neisseria meningitidis hypothetical inner membrane protein nma2189 SWALL:Q9JSQ1 (EMBL:AL162758) (268 aa) fasta scores: E(): 3e-17, 38.04% id in 297 aa; hypothetical protein 3571001 3091559 BPSL2994 Burkholderia pseudomallei K96243 hypothetical protein YP_109589.1 3570102 R 272560 CDS YP_109590.1 53720604 3092670 3571089..3572456 1 NC_006350.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 signal recognition particle protein Ffh or b2610 or c3131 or z3904 or ecs3473 SWALL:SR54_ECOLI (SWALL:P07019) (453 aa) fasta scores: E(): 1.6e-95, 65.26% id in 452 aa, and to Ralstonia solanacearum signal recognition particle protein rsc2811 or rs00294 SWALL:Q8XVL9 (EMBL:AL646072) (476 aa) fasta scores: E(): 2.2e-101, 80.88% id in 476 aa; signal recognition particle protein 3572456 ffh 3092670 ffh Burkholderia pseudomallei K96243 signal recognition particle protein YP_109590.1 3571089 D 272560 CDS YP_109591.1 53720605 3094711 3572554..3573105 1 NC_006350.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 3573105 3094711 BPSL2996 Burkholderia pseudomallei K96243 hypoxanthine-guanine phosphoribosyltransferase YP_109591.1 3572554 D 272560 CDS YP_109592.1 53720606 3094712 complement(3573296..3573898) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2813 or rs00292 SWALL:Q8XVL7 (EMBL:AL646072) (197 aa) fasta scores: E(): 3.3e-48, 71.5% id in 200 aa, and to Xylella fastidiosa hypothetical protein xf2666 SWALL:Q9PA54 (EMBL:AE004072) (198 aa) fasta scores: E(): 4.4e-29, 48.43% id in 192 aa; MarC family integral membrane protein 3573898 3094712 BPSL2997 Burkholderia pseudomallei K96243 MarC family integral membrane protein YP_109592.1 3573296 R 272560 CDS YP_109593.1 53720607 3091660 complement(3573930..3575666) 1 NC_006350.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3575666 proS 3091660 proS Burkholderia pseudomallei K96243 prolyl-tRNA synthetase YP_109593.1 3573930 R 272560 CDS YP_109594.1 53720608 3092881 3575884..3576534 1 NC_006350.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3576534 3092881 BPSL2999 Burkholderia pseudomallei K96243 dinucleoside polyphosphate hydrolase YP_109594.1 3575884 D 272560 CDS YP_109595.1 53720609 3092882 3576590..3577177 1 NC_006350.1 Similar to Ralstonia solanacearum lipoprotein rsc2818 or rs00287 SWALL:Q8XVL2 (EMBL:AL646072) (213 aa) fasta scores: E(): 7.4e-16, 42.38% id in 151 aaWeakly similar to Neisseria meningitidis periplasmic protein nma0881 SWALL:Q9JVD8 (EMBL:AL162754) (203 aa) fasta scores: E(): 0.0044, 27.66% id in 188 aa; lipoprotein 3577177 3092882 BPSL3000 Burkholderia pseudomallei K96243 lipoprotein YP_109595.1 3576590 D 272560 CDS YP_109596.1 53720610 3092861 complement(3577395..3578858) 1 NC_006350.1 Similar to Thermoanaerobacter tengcongensis transposase TTE0846 SWALL:Q8RBH2 (EMBL:AE013051) (492 aa) fasta scores: E(): 3.4e-74, 43.76% id in 457 aa, and to Pseudomonas sp. transposase TnpA SWALL:Q936Y1 (EMBL:U66917) (456 aa) fasta scores: E(): 1.4e-32, 30.96% id in 478 aa; transposase 3578858 3092861 BPSL3001 Burkholderia pseudomallei K96243 transposase YP_109596.1 3577395 R 272560 CDS YP_109597.1 53720611 3091659 complement(3578983..3580101) 1 NC_006350.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 3580101 proB 3091659 proB Burkholderia pseudomallei K96243 gamma-glutamyl kinase YP_109597.1 3578983 R 272560 CDS YP_109598.1 53720612 3092862 complement(3580186..3581304) 1 NC_006350.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 3581304 obgE 3092862 obgE Burkholderia pseudomallei K96243 GTPase ObgE YP_109598.1 3580186 R 272560 CDS YP_109599.1 53720613 3091810 complement(3581489..3581752) 1 NC_006350.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 3581752 rpmA 3091810 rpmA Burkholderia pseudomallei K96243 50S ribosomal protein L27 YP_109599.1 3581489 R 272560 CDS YP_109600.1 53720614 3093772 complement(3581781..3582092) 1 NC_006350.1 Similar to Escherichia coli 50S ribosomal protein L21 RplU or b3186 or z4549 or ecs4065 SWALL:RL21_ECOLI (SWALL:P02422) (103 aa) fasta scores: E(): 1.7e-14, 43.68% id in 103 aa; 50S ribosomal protein L21 3582092 rplU 3093772 rplU Burkholderia pseudomallei K96243 50S ribosomal protein L21 YP_109600.1 3581781 R 272560 CDS YP_109601.1 53720615 3092512 3582308..3583306 1 NC_006350.1 Similar to Escherichia coli octaprenyl-diphosphate synthase IspB or Cel or b3187 SWALL:ISPB_ECOLI (SWALL:P19641) (323 aa) fasta scores: E(): 9.1e-60, 51.12% id in 311 aa; octaprenyl-diphosphate synthase 3583306 ispB 3092512 ispB Burkholderia pseudomallei K96243 octaprenyl-diphosphate synthase YP_109601.1 3582308 D 272560 CDS YP_109602.1 53720616 3092385 3583587..3584882 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein Rsc2824 or Rs00236 SWALL:Q8XVK6 (EMBL:AL646072) (425 aa) fasta scores: E(): 3.4e-98, 59.71% id in 422 aa, and to Escherichia coli hypothetical protein YfjD or b2612/b2613 SWALL:YFJD_ECOLI (SWALL:P37908) (428 aa) fasta scores: E(): 1.4e-58, 37.73% id in 424 aa; hypothetical protein 3584882 3092385 BPSL3007 Burkholderia pseudomallei K96243 hypothetical protein YP_109602.1 3583587 D 272560 CDS YP_109603.1 53720617 3092386 3584982..3586241 1 NC_006350.1 Similar to Aeromonas hydrophila type IV pilus assembly protein TapB SWALL:TAPB_AERHY (SWALL:P45792) (568 aa) fasta scores: E(): 1.3e-64, 51.04% id in 382 aa; type IV pilus assembly protein 3586241 3092386 BPSL3008 Burkholderia pseudomallei K96243 type IV pilus assembly protein YP_109603.1 3584982 D 272560 CDS YP_109604.1 53720618 3093315 3586238..3587455 1 NC_006350.1 Similar to Burkholderia pseudomallei pilus assembly protein PilC SWALL:Q9ZF71 (EMBL:AF110186) (186 aa) fasta scores: E(): 6e-62, 98.92% id in 186 aa, and to Aeromonas hydrophila type IV pilus assembly protein TapC SWALL:TAPC_AERHY (SWALL:P45793) (413 aa) fasta scores: E(): 1e-44, 35.85% id in 396 aa; type IV pilus assembly protein PilC 3587455 pilC 3093315 pilC Burkholderia pseudomallei K96243 type IV pilus assembly protein PilC YP_109604.1 3586238 D 272560 CDS YP_109605.1 53720619 3093631 3587485..3588414 1 NC_006350.1 Previously characterised as Burkholderia pseudomallei type IV prepilin-like proteins leader peptide processing enzyme [includes: leader peptidase (EC 3.4.23.43) (prepilin peptidase); N- methyltransferase (EC 2.1.1.-)] GspO SWALL:LEP4_BURPS (SWALL:Q9ZF70) (275 aa) fasta scores: E(): 5.9e-105, 99.27% id in 275 aa; type IV prepilin leader peptide type M1 3588414 gspO 3093631 gspO Burkholderia pseudomallei K96243 type IV prepilin leader peptide type M1 YP_109605.1 3587485 D 272560 CDS YP_109606.1 53720620 3094796 3588418..3589029 1 NC_006350.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3589029 coaE 3094796 coaE Burkholderia pseudomallei K96243 dephospho-CoA kinase YP_109606.1 3588418 D 272560 CDS YP_109607.1 53720621 3092347 3589178..3589933 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2829 or Rs00276 SWALL:Q8XVK1 (EMBL:AL646072) (252 aa) fasta scores: E(): 5.7e-71, 71.42% id in 252 aa, and to Escherichia coli hypothetical protein YacF or b0102 SWALL:YACF_ECOLI (SWALL:P36680) (247 aa) fasta scores: E(): 3.9e-21, 32.28% id in 254 aa; hypothetical protein 3589933 3092347 BPSL3012 Burkholderia pseudomallei K96243 hypothetical protein YP_109607.1 3589178 D 272560 CDS YP_109608.1 53720622 3092348 3589969..3590172 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical zinc-binding upf0243 protein rsc2830 or rs00275 SWALL:YS30_RALSO (SWALL:Q8XVK0) (71 aa) fasta scores: E(): 4.5e-13, 58.73% id in 63 aa, and to Neisseria gonorrhoeae hypothetical zinc-binding upf0243 protein SWALL:YPIL_NEIGO (SWALL:Q50961) (69 aa) fasta scores: E(): 2.5e-10, 55.93% id in 59 aa; hypothetical protein 3590172 3092348 BPSL3012a Burkholderia pseudomallei K96243 hypothetical protein YP_109608.1 3589969 D 272560 CDS YP_109609.1 53720623 3092228 complement(3590308..3590757) 1 NC_006350.1 Similar to Escherichia coli mutator MutT protein or b0099 SWALL:MUTT_ECOLI (SWALL:P08337) (129 aa) fasta scores: E(): 5.8e-11, 34.64% id in 127 aa, and to Escherichia coli CTP pyrophosphohydrolase NudG or b1759 SWALL:NUDG_ECOLI (SWALL:P77788) (135 aa) fasta scores: E(): 4.7e-09, 38.71% id in 124 aa; NUDIX hydrolase 3590757 3092228 BPSL3013 Burkholderia pseudomallei K96243 NUDIX hydrolase YP_109609.1 3590308 R 272560 CDS YP_109610.1 53720624 3092229 complement(3590754..3591623) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2832 or Rs00273 SWALL:Q8XVJ8 (EMBL:AL646072) (294 aa) fasta scores: E(): 1.3e-80, 77.14% id in 280 aa; hypothetical protein 3591623 3092229 BPSL3014 Burkholderia pseudomallei K96243 hypothetical protein YP_109610.1 3590754 R 272560 CDS YP_109611.1 53720625 3092555 complement(3591644..3592885) 1 NC_006350.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 3592885 argJ 3092555 argJ Burkholderia pseudomallei K96243 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_109611.1 3591644 R 272560 CDS YP_109612.1 53720626 3091641 complement(3593040..3595835) 1 NC_006350.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 3595835 secA 3091641 secA Burkholderia pseudomallei K96243 preprotein translocase subunit SecA YP_109612.1 3593040 R 272560 CDS YP_109613.1 53720627 3091580 3596439..3596918 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2836 or Rs00269 SWALL:Q8XVJ4 (EMBL:AL646072) (195 aa) fasta scores: E(): 1.2e-10, 38.6% id in 158 aa; hypothetical protein 3596918 3091580 BPSL3017 Burkholderia pseudomallei K96243 hypothetical protein YP_109613.1 3596439 D 272560 CDS YP_109614.1 53720628 3093106 complement(3597311..3598228) 1 NC_006350.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3598228 lpxC 3093106 lpxC Burkholderia pseudomallei K96243 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_109614.1 3597311 R 272560 CDS YP_109615.1 53720629 3091581 complement(3598470..3598976) 1 NC_006350.1 Similar to Populus tremula x Populus tremuloides peroxiredoxin SWALL:Q8S3L0 (EMBL:AF483268) (162 aa) fasta scores: E(): 7.5e-26, 47.87% id in 165 aa, and to Brassica rapa subsp. pekinensis type 2 peroxiredoxin PrxII SWALL:Q9XF72 (EMBL:AF133302) (162 aa) fasta scores: E(): 2.2e-24, 45.45% id in 165 aa; redoxin 3598976 3091581 BPSL3019 Burkholderia pseudomallei K96243 redoxin YP_109615.1 3598470 R 272560 CDS YP_109616.1 53720630 3092827 complement(3599162..3600358) 1 NC_006350.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 3600358 ftsZ 3092827 ftsZ Burkholderia pseudomallei K96243 cell division protein FtsZ YP_109616.1 3599162 R 272560 CDS YP_109617.1 53720631 3093402 complement(3600467..3601699) 1 NC_006350.1 Similar to Escherichia coli cell division protein FtsA or DivA or b0094 or z0104 or ecs0098 SWALL:FTSA_ECOLI (SWALL:P06137) (420 aa) fasta scores: E(): 2.2e-62, 46.86% id in 414 aa; cell division protein FtsA 3601699 ftsA 3093402 ftsA Burkholderia pseudomallei K96243 cell division protein FtsA YP_109617.1 3600467 R 272560 CDS YP_109618.1 53720632 3094513 complement(3601726..3602478) 1 NC_006350.1 Similar to Escherichia coli cell division protein FtsQ or b0093 SWALL:FTSQ_ECOLI (SWALL:P06136) (276 aa) fasta scores: E(): 1.6e-18, 30.33% id in 211 aa, and to Ralstonia solanacearum cell division transmembrane protein FtsQ or Rsc2841 or Rs00264 SWALL:Q8XVJ0 (EMBL:AL646072) (299 aa) fasta scores: E(): 1.9e-56, 55.85% id in 256 aa; cell division protein FtsQ 3602478 ftsQ 3094513 ftsQ Burkholderia pseudomallei K96243 cell division protein FtsQ YP_109618.1 3601726 R 272560 CDS YP_109619.1 53720633 3093437 complement(3602499..3603437) 1 NC_006350.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 3603437 ddl 3093437 ddl Burkholderia pseudomallei K96243 D-alanine--D-alanine ligase YP_109619.1 3602499 R 272560 CDS YP_109620.1 53720634 3091555 complement(3603439..3604836) 1 NC_006350.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3604836 murC 3091555 murC Burkholderia pseudomallei K96243 UDP-N-acetylmuramate--L-alanine ligase YP_109620.1 3603439 R 272560 CDS YP_109621.1 53720635 3094394 complement(3604833..3605936) 1 NC_006350.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 3605936 murG 3094394 murG Burkholderia pseudomallei K96243 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_109621.1 3604833 R 272560 CDS YP_109622.1 53720636 3094514 complement(3606058..3607350) 1 NC_006350.1 Similar to Escherichia coli cell division protein FtsW or b0089 or z0099 or ecs0093 SWALL:FTSW_ECOLI (SWALL:P16457) (414 aa) fasta scores: E(): 1.5e-60, 43% id in 386 aa; cell division protein FtsW 3607350 ftsW 3094514 ftsW Burkholderia pseudomallei K96243 cell division protein FtsW YP_109622.1 3606058 R 272560 CDS YP_109623.2 161723195 3094390 complement(3607347..3608861) 1 NC_006350.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 3608861 murD 3094390 murD Burkholderia pseudomallei K96243 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_109623.2 3607347 R 272560 CDS YP_109624.1 53720638 3094816 complement(3608887..3610056) 1 NC_006350.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 3610056 mraY 3094816 mraY Burkholderia pseudomallei K96243 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_109624.1 3608887 R 272560 CDS YP_109625.1 53720639 3093587 complement(3610071..3611477) 1 NC_006350.1 Similar to Escherichia coli UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-- D-alanyl-D-alanyl ligase MurF or Mra or b0086 SWALL:MURF_ECOLI (SWALL:P11880) (452 aa) fasta scores: E(): 5.6e-47, 40.7% id in 457 aa; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate--D-alanyl-D-alanyl ligase 3611477 murF 3093587 murF Burkholderia pseudomallei K96243 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate--D-alanyl-D-alanyl ligase YP_109625.1 3610071 R 272560 CDS YP_109626.1 53720640 3094391 complement(3611474..3613018) 1 NC_006350.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 3613018 murE 3094391 murE Burkholderia pseudomallei K96243 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_109626.1 3611474 R 272560 CDS YP_109627.1 53720641 3094517 complement(3613015..3614859) 1 NC_006350.1 Similar to Escherichia coli peptidoglycan synthetase FtsI or PbpB or b0084 or z0094 or ecs0088 SWALL:FTSI_ECOLI (SWALL:P04286) (588 aa) fasta scores: E(): 2.5e-72, 42.08% id in 556 aa; peptidoglycan synthetase FtsI 3614859 ftsI 3094517 ftsI Burkholderia pseudomallei K96243 peptidoglycan synthetase FtsI YP_109627.1 3613015 R 272560 CDS YP_109628.1 53720642 3092169 complement(3614856..3615185) 1 NC_006350.1 Similar to Escherichia coli cell division protein FtsL or MraR or b0083 or z0093 or ecs0087 SWALL:FTSL_ECOLI (SWALL:P22187) (121 aa) fasta scores: E(): 2.3, 27.02% id in 74 aa, and to Ralstonia solanacearum probable cell division ftsl transmembrane protein FtsI or Rsc2851 or Rs00254 SWALL:Q8XVI0 (EMBL:AL646072) (108 aa) fasta scores: E(): 3e-13, 50% id in 108 aa; cell division protein FtsL 3615185 ftsL 3092169 ftsL Burkholderia pseudomallei K96243 cell division protein FtsL YP_109628.1 3614856 R 272560 CDS YP_109629.1 53720643 3091977 complement(3615182..3616123) 1 NC_006350.1 Similar to Escherichia coli S-adenosyl-methyltransferase MraW or b0082 or z0092 or ecs0086 SWALL:MRAW_ECOLI (SWALL:P18595) (313 aa) fasta scores: E(): 2.4e-60, 54.14% id in 314 aa; S-adenosyl-methyltransferase MraW 3616123 mraW 3091977 mraW Burkholderia pseudomallei K96243 S-adenosyl-methyltransferase MraW YP_109629.1 3615182 R 272560 CDS YP_109630.1 53720644 3091938 complement(3616147..3616575) 1 NC_006350.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 3616575 mraZ 3091938 mraZ Burkholderia pseudomallei K96243 cell division protein MraZ YP_109630.1 3616147 R 272560 CDS YP_109631.1 53720645 3094287 complement(3616964..3617590) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2854 or Rs00251 SWALL:Q8XVH7 (EMBL:AL646072) (211 aa) fasta scores: E(): 7.9e-49, 63.5% id in 211 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0655 SWALL:Q9I5R6 (EMBL:AE004500) (215 aa) fasta scores: E(): 1.2e-32, 47.34% id in 207 aa; hypothetical protein 3617590 3094287 BPSL3035 Burkholderia pseudomallei K96243 hypothetical protein YP_109631.1 3616964 R 272560 CDS YP_109632.1 53720646 3094288 3617871..3619031 1 NC_006350.1 Similar to Burkholderia cepacia Opcp1 porin SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 1.2e-35, 45.89% id in 390 aa, and to Comamonas acidovorans outer membrane porin protein 32 precursor Omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 1.4e-16, 32.26% id in 406 aa; outer membrane porin 3619031 3094288 BPSL3036 Burkholderia pseudomallei K96243 outer membrane porin YP_109632.1 3617871 D 272560 CDS YP_109633.1 53720647 3094304 complement(3619267..3620940) 1 NC_006350.1 activates fatty acids by binding to coenzyme A; Long-chain-fatty-acid--CoA ligase 3620940 fadD 3094304 fadD Burkholderia pseudomallei K96243 Long-chain-fatty-acid--CoA ligase YP_109633.1 3619267 R 272560 CDS YP_109634.1 53720648 3092380 complement(3621080..3623155) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical oxidoreductase Rsc2859 or Rs00246 SWALL:Q8XVH2 (EMBL:AL646072) (698 aa) fasta scores: E(): 5e-202, 69.66% id in 689 aa, and to Escherichia coli formate dehydrogenase H FdhF or b4079 SWALL:FDHF_ECOLI (SWALL:P07658) (715 aa) fasta scores: E(): 4.8e-32, 27.15% id in 718 aa; molybdopterin-containing oxidoreductase 3623155 3092380 BPSL3038 Burkholderia pseudomallei K96243 molybdopterin-containing oxidoreductase YP_109634.1 3621080 R 272560 CDS YP_109635.1 53720649 3092157 complement(3629441..3630235) 1 NC_006350.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3630235 paaF 3092157 paaF Burkholderia pseudomallei K96243 enoyl-CoA hydratase YP_109635.1 3629441 R 272560 CDS YP_109636.1 53720650 3092152 3630348..3632054 1 NC_006350.1 Similar to Azoarcus evansii PaaZ SWALL:Q9F9V2 (EMBL:AF176259) (562 aa) fasta scores: E(): 2.4e-118, 58.43% id in 551 aa, and to Streptomyces coelicolor dehydrogenase SCO3835 or SCH69.05 SWALL:Q9XA29 (EMBL:AL079308) (563 aa) fasta scores: E(): 1.3e-114, 56.11% id in 556 aa, and to Azoarcus evansii ring opening enzyme PacL SWALL:Q9FA63 (EMBL:AJ278756) (483 aa) fasta scores: E(): 7.1e-80, 52.86% id in 524 aa; phenylacetic acid degradation oxidoreductase 3632054 paaZ 3092152 paaZ Burkholderia pseudomallei K96243 phenylacetic acid degradation oxidoreductase YP_109636.1 3630348 D 272560 CDS YP_109637.1 53720651 3093770 3632128..3633345 1 NC_006350.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 3633345 paaJ 3093770 paaJ Burkholderia pseudomallei K96243 beta-ketoadipyl CoA thiolase YP_109637.1 3632128 D 272560 CDS YP_109638.1 53720652 3092158 3633441..3634232 1 NC_006350.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3634232 paaG 3092158 paaG Burkholderia pseudomallei K96243 enoyl-CoA hydratase YP_109638.1 3633441 D 272560 CDS YP_109639.1 53720653 3093769 3634318..3634710 1 NC_006350.1 Similar to Escherichia coli phenylacetic acid degradation protein PaaI or b1396 SWALL:PAAI_ECOLI (SWALL:P76084) (140 aa) fasta scores: E(): 1.2e-22, 48.8% id in 125 aa; phenylacetic acid degradation protein PaaI 3634710 paaI 3093769 paaI Burkholderia pseudomallei K96243 phenylacetic acid degradation protein PaaI YP_109639.1 3634318 D 272560 CDS YP_109640.1 53720654 3093539 3634748..3636046 1 NC_006350.1 Similar to Escherichia coli phenylacetate-coenzyme A ligase PaaK or b1398 SWALL:PAAK_ECOLI (SWALL:P76085) (437 aa) fasta scores: E(): 5.2e-108, 65.12% id in 433 aa; phenylacetate-coenzyme A ligase 3636046 paaA 3093539 paaA Burkholderia pseudomallei K96243 phenylacetate-coenzyme A ligase YP_109640.1 3634748 D 272560 CDS YP_109641.1 53720655 3092381 complement(3636374..3637492) 1 NC_006350.1 Similar to Escherichia coli membrane-bound lytic murein transglycosylase A MltA or Mlt or b2813 or z4130 or ecs3673 SWALL:MLTA_ECOLI (SWALL:P46885) (365 aa) fasta scores: E(): 3e-23, 34.52% id in 307 aa, and to Ralstonia solanacearum membrane-bound lytic murein transglycosylase A transmembrane protein Rsc2876 or Rs00226 SWALL:Q8XVF5 (EMBL:AL646072) (380 aa) fasta scores: E(): 3e-78, 59.28% id in 334 aa; outer membrane-bound lytic murein transglycosylase 3637492 3092381 BPSL3046 Burkholderia pseudomallei K96243 outer membrane-bound lytic murein transglycosylase YP_109641.1 3636374 R 272560 CDS YP_109642.1 53720656 3091750 complement(3637709..3638083) 1 NC_006350.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 3638083 apaG 3091750 apaG Burkholderia pseudomallei K96243 ApaG protein YP_109642.1 3637709 R 272560 CDS YP_109643.1 53720657 3091751 3638220..3638951 1 NC_006350.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 3638951 3091751 BPSL3048 Burkholderia pseudomallei K96243 ribulose-phosphate 3-epimerase YP_109643.1 3638220 D 272560 CDS YP_109644.1 53720658 3092938 3638948..3639685 1 NC_006350.1 Similar to Alcaligenes eutrophus phosphoglycolate phosphatase, chromosomal SWALL:GPHC_ALCEU (SWALL:P40852) (231 aa) fasta scores: E(): 2.4e-24, 40.61% id in 229 aa; hydrolase 3639685 3092938 BPSL3049 Burkholderia pseudomallei K96243 hydrolase YP_109644.1 3638948 D 272560 CDS YP_109645.1 53720659 3092035 3640048..3641541 1 NC_006350.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 3641541 trpE 3092035 trpE Burkholderia pseudomallei K96243 anthranilate synthase component I YP_109645.1 3640048 D 272560 CDS YP_109646.1 53720660 3092485 3641555..3642145 1 NC_006350.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 3642145 trpG 3092485 trpG Burkholderia pseudomallei K96243 anthranilate synthase component II YP_109646.1 3641555 D 272560 CDS YP_109647.1 53720661 3092691 3642163..3643194 1 NC_006350.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 3643194 trpD 3092691 trpD Burkholderia pseudomallei K96243 anthranilate phosphoribosyltransferase YP_109647.1 3642163 D 272560 CDS YP_109648.1 53720662 3092690 3643257..3644042 1 NC_006350.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol phosphate synthase 3644042 trpC 3092690 trpC Burkholderia pseudomallei K96243 indole-3-glycerol phosphate synthase YP_109648.1 3643257 D 272560 CDS YP_109649.1 53720663 3092939 3644053..3644694 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2886 or Rs00215 SWALL:Q8XVE5 (EMBL:AL646072) (223 aa) fasta scores: E(): 2.3e-23, 46.33% id in 218 aa; hypothetical protein 3644694 3092939 BPSL3054 Burkholderia pseudomallei K96243 hypothetical protein YP_109649.1 3644053 D 272560 CDS YP_109650.1 53720664 3091556 3644787..3645524 1 NC_006350.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3645524 ung 3091556 ung Burkholderia pseudomallei K96243 uracil-DNA glycosylase YP_109650.1 3644787 D 272560 CDS YP_109651.1 53720665 3094516 complement(3645743..3646339) 1 NC_006350.1 Similar to Escherichia coli acyl carrier protein phosphodiesterase AcpD or b1412 SWALL:ACPD_ECOLI (SWALL:P41407) (200 aa) fasta scores: E(): 1.4e-31, 48.48% id in 198 aa; ACP phosphodieterase 3646339 acpD 3094516 acpD Burkholderia pseudomallei K96243 ACP phosphodieterase YP_109651.1 3645743 R 272560 CDS YP_109652.1 53720666 3094618 complement(3646478..3648316) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2890 or Rs00209 SWALL:Q8XVE1 (EMBL:AL646072) (621 aa) fasta scores: E(): 9.6e-90, 60.69% id in 631 aa, and to Neisseria meningitidis hypothetical protein Nmb1726 SWALL:Q9JY58 (EMBL:AE002523) (582 aa) fasta scores: E(): 4e-59, 42.93% id in 587 aa; peptidase 3648316 3094618 BPSL3057 Burkholderia pseudomallei K96243 peptidase YP_109652.1 3646478 R 272560 CDS YP_109653.1 53720667 3094725 complement(3648416..3649153) 1 NC_006350.1 Similar to Escherichia coli thiol:disulfide interchange protein DsbC or XprA or b2893 or z4231 or ecs3765 SWALL:DSBC_ECOLI (SWALL:P21892) (236 aa) fasta scores: E(): 8.4e-11, 30.3% id in 231 aa, and to Ralstonia solanacearum probable thiol:disulfide interchange protein DsbC or Rsc2892 or Rs00206 SWALL:Q8XVD9 (EMBL:AL646072) (248 aa) fasta scores: E(): 5.7e-51, 55.06% id in 247 aa; thiol:disulfide interchange protein DsbC 3649153 dsbC 3094725 dsbC Burkholderia pseudomallei K96243 thiol:disulfide interchange protein DsbC YP_109653.1 3648416 R 272560 CDS YP_109654.1 53720668 3094619 complement(3649246..3650427) 1 NC_006350.1 Similar to Escherichia coli protein VisC or b2906 SWALL:VISC_ECOLI (SWALL:P25535) (400 aa) fasta scores: E(): 2.6e-33, 34.01% id in 391 aa, and to Escherichia coli 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase UbiF or b0662 SWALL:UBIF_ECOLI (SWALL:P75728) (391 aa) fasta scores: E(): 1.2e-30, 35.78% id in 394 aa; ubiquinone biosynthesis hydroxylase 3650427 3094619 BPSL3059 Burkholderia pseudomallei K96243 ubiquinone biosynthesis hydroxylase YP_109654.1 3649246 R 272560 CDS YP_109656.1 53720670 3094268 3651327..3651692 1 NC_006350.1 hypothetical protein 3651692 3094268 BPSL3061 Burkholderia pseudomallei K96243 hypothetical protein YP_109656.1 3651327 D 272560 CDS YP_109657.1 53720671 3094493 3652194..3653288 1 NC_006350.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3653288 3094493 BPSL3062 Burkholderia pseudomallei K96243 GTP-dependent nucleic acid-binding protein EngD YP_109657.1 3652194 D 272560 CDS YP_109658.1 53720672 3094494 3653900..3654403 1 NC_006350.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3654403 3094494 BPSL3063 Burkholderia pseudomallei K96243 NADH dehydrogenase subunit B YP_109658.1 3653900 D 272560 CDS YP_109659.1 53720673 3091973 3654507..3655250 1 NC_006350.1 Weakly similar to Xanthomonas campestris transcriptional regulator AraC family xcc0235 SWALL:AAM39554 (EMBL:AE012119) (245 aa) fasta scores: E(): 0.013, 26.19% id in 252 aa. Similar to the C-terminal region of Caulobacter crescentus transcriptional regulator, arac family cc3506 SWALL:Q9A2Q0 (EMBL:AE006009) (321 aa) fasta scores: E(): 3.4e-07, 30.26% id in 228 aa; hypothetical protein 3655250 3091973 BPSL3064 Burkholderia pseudomallei K96243 hypothetical protein YP_109659.1 3654507 D 272560 CDS YP_109660.1 53720674 3091974 complement(3655322..3656725) 1 NC_006350.1 Similar to Escherichia coli GabA permease GabP or b2663 SWALL:GABP_ECOLI (SWALL:P25527) (466 aa) fasta scores: E(): 6e-107, 66.51% id in 433 aa, and to Pseudomonas aeruginosa gamma-aminobutyrate permease GabP or Pa0129 SWALL:Q9I703 (EMBL:AE004450) (475 aa) fasta scores: E(): 3.4e-117, 68.77% id in 458 aa; amino acid permease 3656725 3091974 BPSL3065 Burkholderia pseudomallei K96243 amino acid permease YP_109660.1 3655322 R 272560 CDS YP_109661.1 53720675 3091837 complement(3657986..3658966) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa4792 SWALL:Q9HV16 (EMBL:AE004892) (311 aa) fasta scores: E(): 2.8e-46, 49.02% id in 308 aa, and to Bacillus subtilis glycerophosphoryl diester phosphodiesterase GlpQ SWALL:GLPQ_BACSU (SWALL:P37965) (293 aa) fasta scores: E(): 0.00032, 30.82% id in 133 aa; hydrolase 3658966 3091837 BPSL3066 Burkholderia pseudomallei K96243 hydrolase YP_109661.1 3657986 R 272560 CDS YP_109662.1 53720676 3091838 3659704..3661371 1 NC_006350.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 3661371 3091838 BPSL3067 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_109662.1 3659704 D 272560 CDS YP_109663.1 53720677 3094707 complement(3661707..3662330) 1 NC_006350.1 Similar to many including predicted hydrolases eg. Agrobacterium tumefaciens hydrolase Atu0797 or agr_c_1458 SWALL:Q8UH86 (EMBL:AE009046) (203 aa) fasta scores: E(): 1.2e-25, 41.58% id in 202 aa; hydrolase 3662330 3094707 BPSL3068 Burkholderia pseudomallei K96243 hydrolase YP_109663.1 3661707 R 272560 CDS YP_109664.1 53720678 3094708 complement(3662327..3662854) 1 NC_006350.1 Similar to many predicted hydrolases and hypotheticals eg. Clostridium acetobutylicum amidase from nicotinamidase Cac3465 SWALL:Q97DL0 (EMBL:AE007844) (178 aa) fasta scores: E(): 4.6e-13, 30.06% id in 153 aa; hydrolase 3662854 3094708 BPSL3069 Burkholderia pseudomallei K96243 hydrolase YP_109664.1 3662327 R 272560 CDS YP_109665.1 53720679 3091683 complement(3663033..3664847) 1 NC_006350.1 Similar to Neisseria meningitidis aminopeptidase NMA1640 SWALL:Q9JTT6 (EMBL:AL162756) (659 aa) fasta scores: E(): 3.7e-119, 54.51% id in 598 aa, and to Sus scrofa Xaa-Pro aminopeptidase 2 precursor XpnPep2 SWALL:Q95333 (EMBL:U55039) (673 aa) fasta scores: E(): 1.5e-54, 34.59% id in 607 aa; aminopeptidase 3664847 3091683 BPSL3070 Burkholderia pseudomallei K96243 aminopeptidase YP_109665.1 3663033 R 272560 CDS YP_109666.1 53720680 3091684 complement(3664866..3665120) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein Rsc2899 or Rs00198 SWALL:Q8XVD2 (EMBL:AL646072) (80 aa) fasta scores: E(): 0.0045, 37.5% id in 80 aa, and to Streptomyces coelicolor integral membrane protein SCO1819 or SCI8.04c SWALL:Q9RJ49 (EMBL:AL132644) (93 aa) fasta scores: E(): 0.43, 27.5% id in 80 aa; hypothetical protein 3665120 3091684 BPSL3071 Burkholderia pseudomallei K96243 hypothetical protein YP_109666.1 3664866 R 272560 CDS YP_109667.2 161723194 3094369 3665716..3667014 1 NC_006350.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 3667014 hemA 3094369 hemA Burkholderia pseudomallei K96243 glutamyl-tRNA reductase YP_109667.2 3665716 D 272560 CDS YP_109668.1 53720682 3092221 3667081..3668163 1 NC_006350.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3668163 prfA 3092221 prfA Burkholderia pseudomallei K96243 peptide chain release factor 1 YP_109668.1 3667081 D 272560 CDS YP_109669.1 53720683 3092622 3668207..3669064 1 NC_006350.1 Similar to Escherichia coli protein methyltransferase HemK or b1212 SWALL:HEMK_ECOLI (SWALL:P37186) (277 aa) fasta scores: E(): 1.2e-35, 44.68% id in 273 aa, and to Xylella fastidiosa hemk protein homolog HemK or Xf1512 SWALL:HEMK_XYLFA (SWALL:Q9PD67) (275 aa) fasta scores: E(): 1.2e-41, 50.17% id in 281 aa; protein methyltransferase HemK 3669064 hemK 3092622 hemK Burkholderia pseudomallei K96243 protein methyltransferase HemK YP_109669.1 3668207 D 272560 CDS YP_109670.1 53720684 3093730 3669144..3669452 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2904 or Rs00191 SWALL:Q8XVC7 (EMBL:AL646072) (103 aa) fasta scores: E(): 8.6e-32, 83% id in 100 aa, and to Neisseria meningitidis hypothetical protein Nma0984 or Nmb0773 SWALL:Q9JR73 (EMBL:AL162754) (103 aa) fasta scores: E(): 8.2e-25, 67.67% id in 99 aa; hypothetical protein 3669452 3093730 BPSL3075 Burkholderia pseudomallei K96243 hypothetical protein YP_109670.1 3669144 D 272560 CDS YP_109671.1 53720685 3093731 3669467..3670063 1 NC_006350.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3670063 3093731 BPSL3076 Burkholderia pseudomallei K96243 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_109671.1 3669467 D 272560 CDS YP_109672.1 53720686 3091696 3670347..3671135 1 NC_006350.1 Similar to Xanthomonas campestris hypothetical protein Xcc3666 SWALL:AAM42936 (EMBL:AE012487) (272 aa) fasta scores: E(): 1.9e-47, 52.27% id in 264 aa, and to Streptomyces coelicolor hypothetical protein SCO3204 or SCE22.21c SWALL:Q9KYU2 (EMBL:AL355832) (253 aa) fasta scores: E(): 8.9e-36, 46.35% id in 233 aa; hypothetical protein 3671135 3091696 BPSL3077 Burkholderia pseudomallei K96243 hypothetical protein YP_109672.1 3670347 D 272560 CDS YP_109673.1 53720687 3091697 complement(3671584..3673185) 1 NC_006350.1 Similar to Ralstonia solanacearum probable amino-acid permease transmembrane protein Rsp0282 or Rs03682 SWALL:Q8XT33 (EMBL:AL646077) (543 aa) fasta scores: E(): 1.8e-156, 73.37% id in 522 aa; amino-acid permease 3673185 3091697 BPSL3078 Burkholderia pseudomallei K96243 amino-acid permease YP_109673.1 3671584 R 272560 CDS YP_109674.1 53720688 3094215 3673619..3673822 1 NC_006350.1 May play a regulatory role in chromosomal replication in nutrient-depleted cells. Similar to Escherichia coli cold shock-like protein CspD or CspH or b0880 or z1117 or ecs0966 SWALL:CSPD_ECOLI (SWALL:P24245) (74 aa) fasta scores: E(): 4.2e-16, 62.68% id in 67 aa; cold shock-like protein CspD 3673822 cspD 3094215 cspD Burkholderia pseudomallei K96243 cold shock-like protein CspD YP_109674.1 3673619 D 272560 CDS YP_109675.1 53720689 3094252 complement(3674009..3675271) 1 NC_006350.1 Similar to Rhizobium loti DnaK-type molecular chaperone, DnaK Mll5617 SWALL:Q98BE0 (EMBL:AP003007) (418 aa) fasta scores: E(): 1e-61, 44.89% id in 421 aa, and to Chlamydia muridarum chaperone protein DnaK or Tc0675 SWALL:DNAK_CHLMU (SWALL:P56836) (654 aa) fasta scores: E(): 1.7e-05, 26.8% id in 250 aa, and to Vibrio cholerae chaperone protein DnaK or Vc0855 SWALL:DNAK_VIBCH (SWALL:O34241) (635 aa) fasta scores: E(): 2e-05, 26.12% id in 421 aa; chaperone protein 3675271 3094252 BPSL3080 Burkholderia pseudomallei K96243 chaperone protein YP_109675.1 3674009 R 272560 CDS YP_109676.1 53720690 3094253 complement(3675933..3676550) 1 NC_006350.1 Similar to Paenibacillus sp. A11-2 thermophilic NAD(P)H-flavin oxidoreductase TdsD SWALL:Q9FAE6 (EMBL:AB040150) (200 aa) fasta scores: E(): 1.4e-22, 39.22% id in 181 aa; oxidoreductase 3676550 3094253 BPSL3081 Burkholderia pseudomallei K96243 oxidoreductase YP_109676.1 3675933 R 272560 CDS YP_109677.1 53720691 3092025 complement(3677024..3678307) 1 NC_006350.1 Similar to Ralstonia solanacearum transport transmembrane protein Rsp0107 or Rs03015 SWALL:Q8XTK1 (EMBL:AL646076) (432 aa) fasta scores: E(): 3.8e-121, 75.06% id in 417 aa; hypothetical protein 3678307 3092025 BPSL3082 Burkholderia pseudomallei K96243 hypothetical protein YP_109677.1 3677024 R 272560 CDS YP_109678.1 53720692 3092026 3678466..3679110 1 NC_006350.1 Similar to Ralstonia solanacearum transcription regulator protein Rsp0108 or Rs03014 SWALL:Q8XTK0 (EMBL:AL646076) (216 aa) fasta scores: E(): 1e-35, 56.45% id in 209 aa, and to Streptomyces coelicolor TetR-family transcriptional regulator SCO7602 or SC7H9.14 SWALL:Q9EWI2 (EMBL:AL450223) (195 aa) fasta scores: E(): 1.4e-19, 40.23% id in 169 aa; TetR family transcriptional regulator 3679110 3092026 BPSL3083 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_109678.1 3678466 D 272560 CDS YP_109679.1 53720693 3092839 3679455..3680078 1 NC_006350.1 Similar to Xylella fastidiosa hypothetical protein Xf1204 SWALL:Q9PE24 (EMBL:AE003954) (185 aa) fasta scores: E(): 7.3e-34, 52.57% id in 175 aa; hypothetical protein 3680078 3092839 BPSL3084 Burkholderia pseudomallei K96243 hypothetical protein YP_109679.1 3679455 D 272560 CDS YP_109680.1 53720694 3092840 complement(3680163..3681059) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc3157 or Rs00441 SWALL:Q8XUN0 (EMBL:AL646074) (278 aa) fasta scores: E(): 5e-95, 83.75% id in 277 aa; hypothetical protein 3681059 3092840 BPSL3085 Burkholderia pseudomallei K96243 hypothetical protein YP_109680.1 3680163 R 272560 CDS YP_109681.1 53720695 3094309 complement(3681187..3682377) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc3159 or Rs00439 SWALL:Q8XUM8 (EMBL:AL646074) (376 aa) fasta scores: E(): 3.1e-114, 75.92% id in 378 aa, and to Neisseria meningitidis hypothetical protein Nma1400 SWALL:Q9JUB9 (EMBL:AL162755) (331 aa) fasta scores: E(): 5.3e-57, 49.54% id in 329 aa; hypothetical protein 3682377 3094309 BPSL3086 Burkholderia pseudomallei K96243 hypothetical protein YP_109681.1 3681187 R 272560 CDS YP_109682.1 53720696 3094310 complement(3682680..3683882) 1 NC_006350.1 Similar to Micromonospora megalomicea subsp. nigra mycarose O-acyltransferase MegY SWALL:Q9F838 (EMBL:AF263245) (390 aa) fasta scores: E(): 5.7e-12, 25.38% id in 394 aa, and to Streptomyces mycarofaciens acyltransferase MdmB SWALL:MDMB_STRMY (SWALL:Q00718) (387 aa) fasta scores: E(): 0.00011, 25.93% id in 401 aa; acyltransferase 3683882 3094310 BPSL3087 Burkholderia pseudomallei K96243 acyltransferase YP_109682.1 3682680 R 272560 CDS YP_109683.1 53720697 3094612 complement(3684236..3684682) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0127 SWALL:Q9I705 (EMBL:AE004450) (166 aa) fasta scores: E(): 6.1e-31, 62.14% id in 140 aa; hypothetical protein 3684682 3094612 BPSL3088 Burkholderia pseudomallei K96243 hypothetical protein YP_109683.1 3684236 R 272560 CDS YP_109684.1 53720698 3094613 3685343..3687508 1 NC_006350.1 Similar to Ralstonia solanacearum aminopeptidase transmembrane protein Rsp0532 or Rs00411 SWALL:Q8XSE4 (EMBL:AL646079) (748 aa) fasta scores: E(): 2.4e-99, 46.99% id in 749 aa, and to Mus musculus puromycin-sensitive aminopeptidase Psa SWALL:PSA_MOUSE (SWALL:Q11011) (920 aa) fasta scores: E(): 8e-34, 27.5% id in 629 aa, and to Lactobacillus helveticus aminopeptidase N PepN SWALL:AMPN_LACHE (SWALL:Q10730) (844 aa) fasta scores: E(): 1.1e-25, 30.13% id in 511 aa; peptidase 3687508 3094613 BPSL3089 Burkholderia pseudomallei K96243 peptidase YP_109684.1 3685343 D 272560 CDS YP_109685.1 53720699 3094158 3688531..3688800 1 NC_006350.1 hypothetical protein 3688800 3094158 BPSL3090 Burkholderia pseudomallei K96243 hypothetical protein YP_109685.1 3688531 D 272560 CDS YP_109686.1 53720700 3094159 3688903..3689133 1 NC_006350.1 hypothetical protein 3689133 3094159 BPSL3091 Burkholderia pseudomallei K96243 hypothetical protein YP_109686.1 3688903 D 272560 CDS YP_109687.1 53720701 3094505 3689749..3691017 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable secretion protein Pa4142 SWALL:Q9HWN9 (EMBL:AE004831) (418 aa) fasta scores: E(): 2.3e-68, 53.82% id in 418 aa, and to Escherichia coli microcin H47 secretion protein MchE SWALL:MCHE_ECOLI (SWALL:Q9EXN6) (424 aa) fasta scores: E(): 7.3e-22, 25% id in 420 aa, and to Escherichia coli colicin V secretion protein CvaA SWALL:CVAA_ECOLI (SWALL:P22519) (413 aa) fasta scores: E(): 5.7e-20, 24.44% id in 405 aa; bacteriocin secretion protein 3691017 3094505 BPSL3092 Burkholderia pseudomallei K96243 bacteriocin secretion protein YP_109687.1 3689749 D 272560 CDS YP_109688.1 53720702 3094506 3691032..3693293 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable toxin transporter Pa4143 SWALL:Q9HWN8 (EMBL:AE004831) (719 aa) fasta scores: E(): 1e-153, 67.77% id in 720 aa, and to Escherichia coli probable microcin H47 secretion ATP-binding protein MchF SWALL:MCHF_ECOLI (SWALL:Q9EXN5) (698 aa) fasta scores: E(): 2.1e-90, 41.15% id in 690 aa, and to Escherichia coli colicin V secretion ATP-binding protein CvaB SWALL:CVAB_ECOLI (SWALL:P22520) (698 aa) fasta scores: E(): 1.5e-87, 40.79% id in 679 aa; colicin V-processing peptidase 3693293 3094506 BPSL3093 Burkholderia pseudomallei K96243 colicin V-processing peptidase YP_109688.1 3691032 D 272560 CDS YP_109689.1 53720703 3092470 3693290..3694738 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable secretion protein Pa4144 SWALL:Q9HWN7 (EMBL:AE004831) (471 aa) fasta scores: E(): 8.1e-62, 43.81% id in 477 aa, and to Bordetella pertussis protein CyaE SWALL:CYAE_BORPE (SWALL:P11092) (474 aa) fasta scores: E(): 1.1e-23, 31.89% id in 486 aa; outer membrane bacteriocin efflux protein 3694738 3092470 BPSL3094 Burkholderia pseudomallei K96243 outer membrane bacteriocin efflux protein YP_109689.1 3693290 D 272560 CDS YP_109690.1 53720704 3092471 complement(3694948..3695934) 1 NC_006350.1 Alanine-rich, low complexity protein. No significant database matches; hypothetical protein 3695934 3092471 BPSL3095 Burkholderia pseudomallei K96243 hypothetical protein YP_109690.1 3694948 R 272560 CDS YP_109691.1 53720705 3092435 3696333..3696911 1 NC_006350.1 Similar to Bacteriophage A500 L-alanyl-D-glutamate peptidase Ply or Ply500 SWALL:AEPE_BPA50 (SWALL:Q37979) (289 aa) fasta scores: E(): 0.001, 35.78% id in 109 aa, and to Listeria innocua phagelysin Cply2438 SWALL:Q48583 (EMBL:X89234) (287 aa) fasta scores: E(): 0.0019, 34.86% id in 109 aa; bacteriophage-related peptidase 3696911 3092435 BPSL3096 Burkholderia pseudomallei K96243 bacteriophage-related peptidase YP_109691.1 3696333 D 272560 CDS YP_109692.1 53720706 3092436 3697190..3701083 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein Rsp0763 or Rs01945 SWALL:Q8XRR8 (EMBL:AL646080) (1313 aa) fasta scores: E(): 2.1e-151, 70.59% id in 1306 aa, and to Rhizobium leguminosarum ImpL SWALL:Q93EC2 (EMBL:AF361470) (1158 aa) fasta scores: E(): 2.6e-34, 25.43% id in 1270 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciS protein SWALL:Q93IR7 (EMBL:AJ320483) (1289 aa) fasta scores: E(): 4.5e-13, 25.89% id in 1259 aa; hypothetical protein 3701083 3092436 BPSL3097 Burkholderia pseudomallei K96243 hypothetical protein YP_109692.1 3697190 D 272560 CDS YP_109693.1 53720707 3093089 3701080..3702069 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsp0762 or Rs01946 SWALL:Q8XRR9 (EMBL:AL646080) (328 aa) fasta scores: E(): 3.3e-81, 61.28% id in 328 aa; hypothetical protein 3702069 3093089 BPSL3098 Burkholderia pseudomallei K96243 hypothetical protein YP_109693.1 3701080 D 272560 CDS YP_109694.1 53720708 3093090 3702074..3703006 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein Rsp0761 or Rs01947 SWALL:Q8XRS0 (EMBL:AL646080) (277 aa) fasta scores: E(): 9.8e-51, 62.9% id in 275 aa, and to Bordetella avium outer membrane protein A precursor OmpA SWALL:OMPA_BORAV (SWALL:Q05146) (194 aa) fasta scores: E(): 1.8e-07, 44.89% id in 98 aa; outer membrane protein 3703006 3093090 BPSL3099 Burkholderia pseudomallei K96243 outer membrane protein YP_109694.1 3702074 D 272560 CDS YP_109695.1 53720709 3093360 complement(3703205..3704326) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsp0759 or Rs01949 SWALL:Q8XRS2 (EMBL:AL646080) (337 aa) fasta scores: E(): 1.5e-44, 52.82% id in 354 aa, and to Rhizobium leguminosarum ImpA SWALL:Q93ED3 (EMBL:AF361470) (358 aa) fasta scores: E(): 7.1e-06, 27.1% id in 380 aa; hypothetical protein 3704326 3093360 BPSL3100 Burkholderia pseudomallei K96243 hypothetical protein YP_109695.1 3703205 R 272560 CDS YP_109696.1 53720710 3094210 complement(3704416..3707085) 1 NC_006350.1 Similar to Escherichia coli ClpB protein or HtpM or b2592 or z3886 or ecs3455 SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 2.5e-88, 38.75% id in 867 aa, and to Yersinia enterocolitica Clp protease-associated protein ClpB SWALL:Q9F746 (EMBL:AF285784) (890 aa) fasta scores: E(): 5.8e-134, 49.31% id in 876 aa; protease associated ATPase ClpB 3707085 clpB 3094210 clpB Burkholderia pseudomallei K96243 protease associated ATPase ClpB YP_109696.1 3704416 R 272560 CDS YP_109697.1 53720711 3093361 complement(3707119..3708219) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsp0748 or Rs01960 SWALL:Q8XRT3 (EMBL:AL646080) (363 aa) fasta scores: E(): 4.5e-83, 57.33% id in 368 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 1.6e-17, 30.07% id in 256 aa; hypothetical protein 3708219 3093361 BPSL3102 Burkholderia pseudomallei K96243 hypothetical protein YP_109697.1 3707119 R 272560 CDS YP_109698.1 53720712 3092705 complement(3708183..3710009) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsp0747 or Rs01961 SWALL:Q8XRT4 (EMBL:AL646080) (616 aa) fasta scores: E(): 1.2e-156, 60.72% id in 611 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciC protein SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E(): 6e-31, 30.15% id in 630 aa; hypothetical protein 3710009 3092705 BPSL3103 Burkholderia pseudomallei K96243 hypothetical protein YP_109698.1 3708183 R 272560 CDS YP_109699.1 53720713 3092706 complement(3710101..3710613) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsp0746 or Rs01962 SWALL:Q8XRT5 (EMBL:AL646080) (157 aa) fasta scores: E(): 1.4e-42, 71.79% id in 156 aa; hypothetical protein 3710613 3092706 BPSL3104 Burkholderia pseudomallei K96243 hypothetical protein YP_109699.1 3710101 R 272560 CDS YP_109700.1 53720714 3093075 complement(3710641..3711144) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsp0745 or Rs01963 SWALL:Q8XRT6 (EMBL:AL646080) (167 aa) fasta scores: E(): 3.7e-49, 72.45% id in 167 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2367 SWALL:Q9I1B2 (EMBL:AE004663) (165 aa) fasta scores: E(): 1.1e-11, 32.91% id in 158 aa; hypothetical protein 3711144 3093075 BPSL3105 Burkholderia pseudomallei K96243 hypothetical protein YP_109700.1 3710641 R 272560 CDS YP_109701.1 53720715 3093076 complement(3711217..3712707) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsp0744 or Rs01964 SWALL:Q8XRT7 (EMBL:AL646080) (496 aa) fasta scores: E(): 9.4e-175, 86.26% id in 495 aa, and to Rhizobium leguminosarum ImpC SWALL:Q93ED1 (EMBL:AF361470) (493 aa) fasta scores: E(): 3.2e-102, 51.41% id in 496 aa; hypothetical protein 3712707 3093076 BPSL3106 Burkholderia pseudomallei K96243 hypothetical protein YP_109701.1 3711217 R 272560 CDS YP_109702.1 53720716 3093725 complement(3712724..3713242) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsp0743 or Rs01965 SWALL:Q8XRT8 (EMBL:AL646080) (170 aa) fasta scores: E(): 4.6e-47, 79.16% id in 168 aa; hypothetical protein 3713242 3093725 BPSL3107 Burkholderia pseudomallei K96243 hypothetical protein YP_109702.1 3712724 R 272560 CDS YP_109703.1 53720717 3093726 complement(3713279..3713950) 1 NC_006350.1 Similar to Ralstonia solanacearum lipoprotein Rsp0742 or Rs01966 SWALL:Q8XRT9 (EMBL:AL646080) (215 aa) fasta scores: E(): 4.6e-27, 53.36% id in 223 aa; lipoprotein 3713950 3093726 BPSL3108 Burkholderia pseudomallei K96243 lipoprotein YP_109703.1 3713279 R 272560 CDS YP_109704.1 53720718 3094305 3714325..3714939 1 NC_006350.1 Similar to Ralstonia solanacearum transmembrane protein Rsp0741 or Rs01967 SWALL:Q8XRU0 (EMBL:AL646080) (193 aa) fasta scores: E(): 3.9e-40, 59.16% id in 191 aa; lipoprotein 3714939 3094305 BPSL3109 Burkholderia pseudomallei K96243 lipoprotein YP_109704.1 3714325 D 272560 CDS YP_109705.1 53720719 3094306 3715048..3716394 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsp0740 or Rs01968 SWALL:Q8XRU1 (EMBL:AL646080) (448 aa) fasta scores: E(): 3.8e-135, 73.66% id in 448 aa, and to Rhizobium leguminosarum ImpJ SWALL:Q93EC4 (EMBL:AF361470) (446 aa) fasta scores: E(): 8.8e-32, 29.13% id in 460 aa; hypothetical protein 3716394 3094306 BPSL3110 Burkholderia pseudomallei K96243 hypothetical protein YP_109705.1 3715048 D 272560 CDS YP_109706.1 53720720 3094093 3716391..3717176 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein Rsp0739 or Rs01969 SWALL:Q8XRU2 (EMBL:AL646080) (263 aa) fasta scores: E(): 2.7e-70, 64.98% id in 257 aa; hypothetical protein 3717176 3094093 BPSL3111 Burkholderia pseudomallei K96243 hypothetical protein YP_109706.1 3716391 D 272560 CDS YP_109707.1 53720721 3093388 3718434..3719234 1 NC_006350.1 hypothetical protein 3719234 3093388 BPSL3114 Burkholderia pseudomallei K96243 hypothetical protein YP_109707.1 3718434 D 272560 CDS YP_109708.1 53720722 3093389 3719241..3720311 1 NC_006350.1 Similar to Neisseria meningitidis transcriptional regulator, HTH_3 family NMB2012 SWALL:Q9JXJ6 (EMBL:AE002551) (363 aa) fasta scores: E(): 8.6e-26, 38.1% id in 370 aa, and to Comamonas testosteroni regulation of transfer protein TrbA SWALL:Q9AHH8 (EMBL:AF311437) (102 aa) fasta scores: E(): 0.068, 31.52% id in 92 aa; transcriptional regulator 3720311 3093389 BPSL3115 Burkholderia pseudomallei K96243 transcriptional regulator YP_109708.1 3719241 D 272560 CDS YP_109709.1 53720723 3094429 3720594..3720857 1 NC_006350.1 Identical to Burkholderia cepacia insertion element IS407 hypothetical protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 3.7e-32, 100% id in 87 aa. Similar to Ralstonia solanacearum ISRso14-transposase orfA protein SWALL:Q8XGL4 (EMBL:AL646083) (87 aa) fasta scores: E(): 2.1e-29, 93.1% id in 87 aa; transposase 3720857 3094429 BPSL3116 Burkholderia pseudomallei K96243 transposase YP_109709.1 3720594 D 272560 CDS YP_109710.1 53720724 3094430 3720854..3721714 1 NC_006350.1 Similar to Ralstonia solanacearum ISRso14-transposase orfB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 1.2e-97, 86.86% id in 274 aa. C-terminus is identical to Burkholderia cepacia insertion element IS407 hypothetical protein SWALL:YI71_BURCE (SWALL:P24577) (183 aa) fasta scores: E(): 8.9e-73, 100% id in 183 aa; hypothetical protein 3721714 3094430 BPSL3117 Burkholderia pseudomallei K96243 hypothetical protein YP_109710.1 3720854 D 272560 CDS YP_109711.1 53720725 3094427 complement(3722117..3724717) 1 NC_006350.1 Contains a region with similarity to type I restriction modification system methylases eg. Xanthomonas campestris XmnI methyltransferase Xcc4142 SWALL:AAM43363 (EMBL:AE012539) (487 aa) fasta scores: E(): 5.6e-08, 27.5% id in 440 aa, and Campylobacter jejuni restriction and modification enzyme CjeI SWALL:Q9JN06 (EMBL:AF264911) (1250 aa) fasta scores: E(): 0.00027, 20.59% id in 369 aa. CDS contain C-terminal imperfect repeat region with similarity to intergenic region between BSPL3111 and BPSL3113; restriction modification system methylase 3724717 3094427 BPSL3118 Burkholderia pseudomallei K96243 restriction modification system methylase YP_109711.1 3722117 R 272560 CDS YP_109712.1 53720726 3094428 complement(3724956..3725513) 1 NC_006350.1 Similar to Ralstonia solanacearum stringent starvation protein B SspB or Rsc2925 or Rs00327 SWALL:Q8XVA6 (EMBL:AL646072) (165 aa) fasta scores: E(): 2.2e-26, 55.42% id in 175 aa, and to Escherichia coli stringent starvation protein B SspB or b3228 or z4586 or ecs4101 SWALL:SSPB_ECOLI (SWALL:P25663) (165 aa) fasta scores: E(): 1.9e-13, 38.5% id in 174 aa; ClpXP protease specificity-enhancing factor 3725513 3094428 BPSL3119 Burkholderia pseudomallei K96243 ClpXP protease specificity-enhancing factor YP_109712.1 3724956 R 272560 CDS YP_109713.1 53720727 3092038 complement(3725547..3726158) 1 NC_006350.1 Similar to Ralstonia solanacearum transcription modulator protein SspA or Rsc2926 or Rs00165 SWALL:Q8XVA5 (EMBL:AL646072) (203 aa) fasta scores: E(): 6.1e-79, 98.03% id in 203 aa, and to Escherichia coli stringent starvation protein A SspA or Ssp or Pog or b3229 or z4587 or ecs4102 SWALL:SSPA_ECOLI (SWALL:P05838) (211 aa) fasta scores: E(): 3.3e-30, 44.82% id in 203 aa; stringent starvation protein A 3726158 3092038 BPSL3120 Burkholderia pseudomallei K96243 stringent starvation protein A YP_109713.1 3725547 R 272560 CDS YP_109714.1 53720728 3093520 complement(3726251..3727009) 1 NC_006350.1 Similar to Rhodospirillum rubrum cytochrome c1 precursor PetC SWALL:CY1_RHORU (SWALL:P23135) (272 aa) fasta scores: E(): 2.5e-07, 32.45% id in 228 aa, and to Ralstonia solanacearum cytochrome c1 precursor transmembrane protein PetC or Rsc2927 or Rs00164 SWALL:Q8XVA4 (EMBL:AL646072) (248 aa) fasta scores: E(): 4.8e-67, 65.07% id in 252 aa; cytochrome c1 3727009 petC 3093520 petC Burkholderia pseudomallei K96243 cytochrome c1 YP_109714.1 3726251 R 272560 CDS YP_109715.1 53720729 3094364 complement(3727032..3728414) 1 NC_006350.1 Similar to Rhodobacter capsulatus cytochrome b PetB or CytB SWALL:CYB_RHOCA (SWALL:P08502) (436 aa) fasta scores: E(): 4.6e-57, 39.69% id in 456 aa, and to Rhodocyclus gelatinosus cytochrome b CytB or PetB SWALL:Q93SY6 (EMBL:AF380164) (423 aa) fasta scores: E(): 7.1e-102, 66.96% id in 448 aa; cytochrome b 3728414 petB 3094364 petB Burkholderia pseudomallei K96243 cytochrome b YP_109715.1 3727032 R 272560 CDS YP_109716.1 53720730 3094363 complement(3728415..3729038) 1 NC_006350.1 Similar to Rhodobacter capsulatus ubiquinol-cytochrome C reductase iron-sulfur subunit PetA or FbcF SWALL:UCRI_RHOCA (SWALL:P08500) (191 aa) fasta scores: E(): 1.3e-14, 37.5% id in 192 aa, and to Rhodocyclus gelatinosus rieske protein PetA SWALL:Q93SY7 (EMBL:AF380164) (198 aa) fasta scores: E(): 6.7e-41, 54.87% id in 195 aa; ubiquinol-cytochrome c reductase iron-sulfur subunit 3729038 petA 3094363 petA Burkholderia pseudomallei K96243 ubiquinol-cytochrome c reductase iron-sulfur subunit YP_109716.1 3728415 R 272560 CDS YP_109717.1 53720731 3092039 complement(3729256..3730002) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2931 or Rs00159 SWALL:YT31_RALSO (SWALL:Q8XVA0) (248 aa) fasta scores: E(): 2.7e-60, 59.67% id in 248 aa; hypothetical protein 3730002 3092039 BPSL3124 Burkholderia pseudomallei K96243 hypothetical protein YP_109717.1 3729256 R 272560 CDS YP_109718.1 53720732 3092821 3730024..3731232 1 NC_006350.1 Similar to Pseudomonas aeruginosa AlgW SWALL:Q51374 (EMBL:U29172) (389 aa) fasta scores: E(): 2e-57, 49.09% id in 385 aa, and to Brucella melitensis protease DO Bmei0783 SWALL:Q8YHL4 (EMBL:AE009519) (474 aa) fasta scores: E(): 3.3e-48, 45.78% id in 356 aa, and to Escherichia coli protease DegQ or HhoA or b3234 SWALL:DEGQ_ECOLI (SWALL:P39099) (455 aa) fasta scores: E(): 2.3e-46, 43.37% id in 362 aa; DegQ protease 3731232 3092821 BPSL3125 Burkholderia pseudomallei K96243 DegQ protease YP_109718.1 3730024 D 272560 CDS YP_109719.1 53720733 3091540 complement(3731572..3732354) 1 NC_006350.1 Similar to Escherichia coli Sec-independent protein translocase TatC or MttB or b3839 or z5360 or ecs4768 SWALL:TATC_ECOLI (SWALL:P27857) (258 aa) fasta scores: E(): 1.8e-48, 52.03% id in 246 aa, and to Alcaligenes eutrophus TatC SWALL:Q8VQ52 (EMBL:AF461118) (265 aa) fasta scores: E(): 5.3e-69, 71.14% id in 253 aa; Sec-independent protein translocase TatC 3732354 tatC 3091540 tatC Burkholderia pseudomallei K96243 Sec-independent protein translocase TatC YP_109719.1 3731572 R 272560 CDS YP_109720.1 53720734 3092514 complement(3732393..3732920) 1 NC_006350.1 Similar to Escherichia coli Sec-independent protein translocase TatB or MttA2 or b3838 or z5359 or ecs4767 SWALL:TATB_ECOLI (SWALL:O69415) (171 aa) fasta scores: E(): 0.022, 31.46% id in 143 aa, and to Alcaligenes eutrophus TatB SWALL:Q8VQ53 (EMBL:AF461118) (170 aa) fasta scores: E(): 2.4e-30, 57.22% id in 173 aa; sec-independent translocase 3732920 tatB 3092514 tatB Burkholderia pseudomallei K96243 sec-independent translocase YP_109720.1 3732393 R 272560 CDS YP_109721.1 53720735 3094102 complement(3732947..3733180) 1 NC_006350.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase A 3733180 tatA 3094102 tatA Burkholderia pseudomallei K96243 twin arginine translocase A YP_109721.1 3732947 R 272560 CDS YP_109722.1 53720736 3092822 complement(3733269..3733634) 1 NC_006350.1 Similar to Neisseria meningitidis nucleotide-binding protein NMA0806 SWALL:Q9JVK0 (EMBL:AL162754) (107 aa) fasta scores: E(): 1.7e-19, 51.37% id in 109 aa; hypothetical protein 3733634 3092822 BPSL3129 Burkholderia pseudomallei K96243 hypothetical protein YP_109722.1 3733269 R 272560 CDS YP_109723.1 53720737 3091601 complement(3733663..3734052) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein Rsc2943 or Rs00144 SWALL:Q8XV88 (EMBL:AL646072) (124 aa) fasta scores: E(): 4e-22, 54.62% id in 119 aa; hypothetical protein 3734052 3091601 BPSL3130 Burkholderia pseudomallei K96243 hypothetical protein YP_109723.1 3733663 R 272560 CDS YP_109724.1 53720738 3091926 complement(3734105..3734473) 1 NC_006350.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 3734473 hisE 3091926 hisE Burkholderia pseudomallei K96243 phosphoribosyl-ATP pyrophosphatase YP_109724.1 3734105 R 272560 CDS YP_109725.1 53720739 3094021 complement(3734470..3734886) 1 NC_006350.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 3734886 hisI 3094021 hisI Burkholderia pseudomallei K96243 phosphoribosyl-AMP cyclohydrolase YP_109725.1 3734470 R 272560 CDS YP_109726.2 161723193 3091767 complement(3734883..3735656) 1 NC_006350.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 3735656 hisF 3091767 hisF Burkholderia pseudomallei K96243 imidazole glycerol phosphate synthase subunit HisF YP_109726.2 3734883 R 272560 CDS YP_109727.1 53720741 3093946 complement(3735739..3736494) 1 NC_006350.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3736494 hisA 3093946 hisA Burkholderia pseudomallei K96243 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_109727.1 3735739 R 272560 CDS YP_109728.1 53720742 3092961 complement(3736662..3737303) 1 NC_006350.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 3737303 hisH 3092961 hisH Burkholderia pseudomallei K96243 imidazole glycerol phosphate synthase subunit HisH YP_109728.1 3736662 R 272560 CDS YP_109729.1 53720743 3091602 complement(3737300..3737920) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein Rsc2949 or Rs00137 SWALL:Q8XV82 (EMBL:AL646072) (207 aa) fasta scores: E(): 1.6e-51, 67.31% id in 205 aa, and to Shigella flexneri MarC SWALL:AAL06491 (EMBL:AF411963) (221 aa) fasta scores: E(): 6.5e-12, 34.74% id in 213 aa; hypothetical protein 3737920 3091602 BPSL3136 Burkholderia pseudomallei K96243 hypothetical protein YP_109729.1 3737300 R 272560 CDS YP_109730.1 53720744 3092887 complement(3737976..3738563) 1 NC_006350.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 3738563 hisB 3092887 hisB Burkholderia pseudomallei K96243 imidazoleglycerol-phosphate dehydratase YP_109730.1 3737976 R 272560 CDS YP_109731.1 53720745 3092888 complement(3738627..3739697) 1 NC_006350.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3739697 hisC 3092888 hisC Burkholderia pseudomallei K96243 histidinol-phosphate aminotransferase YP_109731.1 3738627 R 272560 CDS YP_109732.1 53720746 3091925 complement(3739853..3741190) 1 NC_006350.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 3741190 hisD 3091925 hisD Burkholderia pseudomallei K96243 histidinol dehydrogenase YP_109732.1 3739853 R 272560 CDS YP_109733.1 53720747 3092960 complement(3741232..3741888) 1 NC_006350.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase 3741888 hisG 3092960 hisG Burkholderia pseudomallei K96243 ATP phosphoribosyltransferase YP_109733.1 3741232 R 272560 CDS YP_109734.1 53720748 3091511 complement(3741885..3743234) 1 NC_006350.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3743234 murA 3091511 murA Burkholderia pseudomallei K96243 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_109734.1 3741885 R 272560 CDS YP_109735.1 53720749 3091486 complement(3743248..3743487) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2954 or Rs01346 SWALL:Q8XV77 (EMBL:AL646072) (78 aa) fasta scores: E(): 3.7e-27, 87.01% id in 77 aa, and to Vibrio cholerae BolA protein or Vc2296 SWALL:BOLA_VIBCH (SWALL:Q9KPS0) (106 aa) fasta scores: E(): 1e-06, 41.09% id in 73 aa; BolA-like protein 3743487 3091486 BPSL3142 Burkholderia pseudomallei K96243 BolA-like protein YP_109735.1 3743248 R 272560 CDS YP_109736.1 53720750 3091487 complement(3743573..3744328) 1 NC_006350.1 Similar to Caulobacter crescentus ABC-2 type transporter Cc2244 SWALL:Q9A651 (EMBL:AE005895) (273 aa) fasta scores: E(): 3.3e-39, 50.59% id in 253 aa, and to Yersinia pestis ABC transporter integral membrane protein Ypo3405 SWALL:Q8ZBK4 (EMBL:AJ414157) (256 aa) fasta scores: E(): 5.9e-30, 37.5% id in 248 aa; ABC transporter inner membrane subunit 3744328 3091487 BPSL3143 Burkholderia pseudomallei K96243 ABC transporter inner membrane subunit YP_109736.1 3743573 R 272560 CDS YP_109737.1 53720751 3091438 complement(3744325..3745266) 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein Rsc2956 or Rs01344 SWALL:Q8XV75 (EMBL:AL646072) (321 aa) fasta scores: E(): 1.3e-76, 78.85% id in 298 aa, and to Rhizobium loti nodulation ATP-binding protein I NodI or Mlr6164 SWALL:NODI_RHILO (SWALL:P23703) (340 aa) fasta scores: E(): 6e-27, 38.39% id in 323 aa; ABC transporter ATP-binding subunit 3745266 3091438 BPSL3144 Burkholderia pseudomallei K96243 ABC transporter ATP-binding subunit YP_109737.1 3744325 R 272560 CDS YP_109738.1 53720752 3091439 complement(3745547..3745816) 1 NC_006350.1 Similar to Ralstonia solanacearum signal peptide protein Rsc2957 or Rs01343 SWALL:Q8XV74 (EMBL:AL646072) (115 aa) fasta scores: E(): 3.2e-09, 50.6% id in 83 aa, and to Pseudomonas putida toluene tolerance protein Ttg2E SWALL:Q9Z3Z8 (EMBL:AF106002) (100 aa) fasta scores: E(): 0.13, 31.25% id in 80 aa; hypothetical protein 3745816 3091439 BPSL3145 Burkholderia pseudomallei K96243 hypothetical protein YP_109738.1 3745547 R 272560 CDS YP_109739.1 53720753 3094199 complement(3745813..3746445) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein Rsc2958 or Rs01342 SWALL:Q8XV73 (EMBL:AL646072) (211 aa) fasta scores: E(): 4.6e-34, 47.84% id in 209 aa, and to Pseudomonas putida toluene tolerance protein Ttg2D SWALL:Q9Z3Z9 (EMBL:AF106002) (215 aa) fasta scores: E(): 1.9e-06, 25% id in 208 aa; hypothetical protein 3746445 3094199 BPSL3146 Burkholderia pseudomallei K96243 hypothetical protein YP_109739.1 3745813 R 272560 CDS YP_109740.1 53720754 3094200 complement(3746560..3747570) 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein precursor VacJ or Rsc2959 or Rs01340 SWALL:Q8XV72 (EMBL:AL646072) (269 aa) fasta scores: E(): 1.5e-30, 52.61% id in 249 aa, and to Shigella flexneri VacJ lipoprotein or Sf2424 SWALL:VACJ_SHIFL (SWALL:P43262) (251 aa) fasta scores: E(): 1.7e-15, 39.16% id in 240 aa; lipoprotein 3747570 3094200 BPSL3147 Burkholderia pseudomallei K96243 lipoprotein YP_109740.1 3746560 R 272560 CDS YP_109741.1 53720755 3094175 complement(3747567..3748127) 1 NC_006350.1 Similar to Ralstonia solanacearum probable signal peptide protein Rsc2960 or Rs01338 SWALL:Q8XV71 (EMBL:AL646072) (173 aa) fasta scores: E(): 3.5e-36, 67.42% id in 175 aa, and to Neisseria meningitidis outer membrane transport protein NMA0487 or NMB1964 SWALL:Q9JR43 (EMBL:AL162753) (164 aa) fasta scores: E(): 3.4e-25, 58.89% id in 163 aa; hypothetical protein 3748127 3094175 BPSL3148 Burkholderia pseudomallei K96243 hypothetical protein YP_109741.1 3747567 R 272560 CDS YP_109742.1 53720756 3094176 complement(3748140..3748907) 1 NC_006350.1 Similar to many membrane proteins, e.g. Ralstonia solanacearum probable transmembrane protein Rsc2961 or Rs01337 SWALL:Q8XV70 (EMBL:AL646072) (255 aa) fasta scores: E(): 3.7e-67, 77.64% id in 255 aa; hypothetical protein 3748907 3094176 BPSL3149 Burkholderia pseudomallei K96243 hypothetical protein YP_109742.1 3748140 R 272560 CDS YP_109743.1 53720757 3094146 complement(3748904..3749722) 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein Rsc2962 or Rs01335 SWALL:Q8XV69 (EMBL:AL646072) (279 aa) fasta scores: E(): 1.3e-66, 72.79% id in 272 aa, and to Pseudomonas putida toluene tolerance protein Ttg2A SWALL:Q9Z402 (EMBL:AF106002) (269 aa) fasta scores: E(): 1.6e-49, 54.85% id in 268 aa; ABC transporter ATP-binding subunit 3749722 3094146 BPSL3150 Burkholderia pseudomallei K96243 ABC transporter ATP-binding subunit YP_109743.1 3748904 R 272560 CDS YP_109744.1 53720758 3092618 complement(3749822..3750916) 1 NC_006350.1 Contains extra N-terminal domain not seen in most homologues. C-terminal portion similar to Escherichia coli thiamine-phosphate pyrophosphorylase ThiE or b3993 SWALL:THIE_ECOLI (SWALL:P30137) (211 aa) fasta scores: E(): 2.3e-33, 55.28% id in 208 aa Full length similarity to to Ralstonia solanacearum probable thiamine-phosphate pyrophosphorylase ThiE1 or Rsc0108 or Rs00978 SWALL:Q8Y373 (EMBL:AL646057) (383 aa) fasta scores: E(): 1.3e-33, 46.6% id in 339 aa; thiamine-phosphate pyrophosphorylase 3750916 thiE 3092618 thiE Burkholderia pseudomallei K96243 thiamine-phosphate pyrophosphorylase YP_109744.1 3749822 R 272560 CDS YP_109745.1 53720759 3092619 complement(3750913..3751728) 1 NC_006350.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 3751728 thiG 3092619 thiG Burkholderia pseudomallei K96243 thiazole synthase YP_109745.1 3750913 R 272560 CDS YP_109746.1 53720760 3092335 complement(3751781..3751978) 1 NC_006350.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 3751978 thiS 3092335 thiS Burkholderia pseudomallei K96243 sulfur carrier protein ThiS YP_109746.1 3751781 R 272560 CDS YP_109747.1 53720761 3092334 complement(3752027..3753154) 1 NC_006350.1 Similar to Rhizobium etli thiamine biosynthesis oxidoreductase ThiO SWALL:THIO_RHIET (SWALL:O34292) (327 aa) fasta scores: E(): 1.5e-29, 43.9% id in 328 aa; thiamine biosynthesis oxidoreductase ThiO 3753154 thiO 3092334 thiO Burkholderia pseudomallei K96243 thiamine biosynthesis oxidoreductase ThiO YP_109747.1 3752027 R 272560 CDS YP_109748.2 229269496 3094147 3753763..3755529 1 NC_006350.1 Similar to Ralstonia solanacearum probable ATP-binding transport ABC transporter protein rsc0456 or rs04444 SWALL:Q8Y280 (EMBL:AL646059) (614 aa) fasta scores: E(): 1.9e-86, 49.01% id in 557 aa; ABC transporter 3755529 3094147 BPSL3155 Burkholderia pseudomallei K96243 ABC transporter YP_109748.2 3753763 D 272560 CDS YP_109749.1 53720763 3092182 complement(3755758..3756312) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2364 or Rs01182 SWALL:Q8XWV6 (EMBL:AL646069) (207 aa) fasta scores: E(): 1.6e-08, 31.74% id in 189 aa, and to Pyrococcus abyssi hypothetical protein Pab0062 SWALL:Q9V2H2 (EMBL:AJ248283) (184 aa) fasta scores: E(): 0.00024, 26.08% id in 184 aa; hypothetical protein 3756312 3092182 BPSL3156 Burkholderia pseudomallei K96243 hypothetical protein YP_109749.1 3755758 R 272560 CDS YP_109750.1 53720764 3092183 complement(3756315..3757826) 1 NC_006350.1 Similar to Vibrio cholerae sodium/alanine symporter Vc2356 SWALL:Q9KPL1 (EMBL:AE004306) (476 aa) fasta scores: E(): 4.5e-94, 56.5% id in 469 aa, and to Bacillus subtilis amino acid carrier protein AlsT SWALL:ALST_BACSU (SWALL:Q45068) (465 aa) fasta scores: E(): 3.8e-80, 49.46% id in 463 aa; sodium:amino acid symporter 3757826 3092183 BPSL3157 Burkholderia pseudomallei K96243 sodium:amino acid symporter YP_109750.1 3756315 R 272560 CDS YP_109751.2 161723192 3092901 complement(3758107..3759573) 1 NC_006350.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3759573 gltD 3092901 gltD Burkholderia pseudomallei K96243 glutamate synthase subunit beta YP_109751.2 3758107 R 272560 CDS YP_109752.1 53720766 3092803 complement(3759667..3764370) 1 NC_006350.1 Similar to Synechocystis sp. ferredoxin-dependent glutamate synthase 2 GltS or Sll1499 SWALL:GLTS_SYNY3 (SWALL:P55038) (1556 aa) fasta scores: E(): 0, 43.8% id in 1573 aa, and to Ralstonia solanacearum probable glutamate synthase GltB or Rsc2965 or Rs01332 SWALL:Q8XV66 (EMBL:AL646072) (1582 aa) fasta scores: E(): 0, 83.76% id in 1564 aa; glutamate synthase large subunit 3764370 glt1 3092803 glt1 Burkholderia pseudomallei K96243 glutamate synthase large subunit YP_109752.1 3759667 R 272560 CDS YP_109753.1 53720767 3093030 complement(3764662..3765375) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc2966 or rs01331 SWALL:Q8XV65 (EMBL:AL646072) (241 aa) fasta scores: E(): 2.5e-39, 46.66% id in 225 aa; hypothetical protein 3765375 3093030 BPSL3160 Burkholderia pseudomallei K96243 hypothetical protein YP_109753.1 3764662 R 272560 CDS YP_109754.1 53720768 3093031 3765568..3766299 1 NC_006350.1 Similar to Ralstonia solanacearum outer membrane W OmpW or Rsc3350 or Rs02625 SWALL:Q8XU43 (EMBL:AL646074) (241 aa) fasta scores: E(): 2e-43, 51.01% id in 247 aa, and to Vibrio cholerae outer membrane protein W OmpW or Vca0867 SWALL:OMPW_VIBCH (SWALL:P17266) (217 aa) fasta scores: E(): 9.6e-11, 30.16% id in 242 aa; outer membrane protein 3766299 3093031 BPSL3161 Burkholderia pseudomallei K96243 outer membrane protein YP_109754.1 3765568 D 272560 CDS YP_109755.1 53720769 3093003 complement(3766445..3767206) 1 NC_006350.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; cytoplasmic glycerophosphodiester phosphodiesterase 3767206 ugpQ 3093003 ugpQ Burkholderia pseudomallei K96243 cytoplasmic glycerophosphodiester phosphodiesterase YP_109755.1 3766445 R 272560 CDS YP_109756.1 53720770 3094792 complement(3767251..3768333) 1 NC_006350.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 3768333 ugpC 3094792 ugpC Burkholderia pseudomallei K96243 glycerol-3-phosphate transporter ATP-binding subunit YP_109756.1 3767251 R 272560 CDS YP_109757.1 53720771 3094793 complement(3768359..3769204) 1 NC_006350.1 with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 3769204 3094793 BPSL3164 Burkholderia pseudomallei K96243 glycerol-3-phosphate transporter membrane protein YP_109757.1 3768359 R 272560 CDS YP_109758.1 53720772 3093368 complement(3769201..3770085) 1 NC_006350.1 Possibly involved in transport of sn-glycerol-3-phosphate. Similar to many eg. Escherichia coli Sn-glycerol-3-phosphate transport system permease UgpA or b3452 SWALL:UGPA_ECOLI (SWALL:P10905) (295 aa) fasta scores: E(): 4.5e-78, 70.73% id in 287 aa; ABC transporter permease 3770085 3093368 BPSL3165 Burkholderia pseudomallei K96243 ABC transporter permease YP_109758.1 3769201 R 272560 CDS YP_109759.1 53720773 3093369 complement(3770216..3771541) 1 NC_006350.1 with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 3771541 3093369 BPSL3166 Burkholderia pseudomallei K96243 glycerol-3-phosphate transporter periplasmic binding protein YP_109759.1 3770216 R 272560 CDS YP_109760.1 53720774 3094495 complement(3771626..3772858) 1 NC_006350.1 dGTPase type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 3772858 3094495 BPSL3167 Burkholderia pseudomallei K96243 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_109760.1 3771626 R 272560 CDS YP_109761.1 53720775 3092462 complement(3772907..3773986) 1 NC_006350.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 3773986 aroB 3092462 aroB Burkholderia pseudomallei K96243 3-dehydroquinate synthase YP_109761.1 3772907 R 272560 CDS YP_109762.1 53720776 3092396 complement(3773983..3774537) 1 NC_006350.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 3774537 aroK 3092396 aroK Burkholderia pseudomallei K96243 shikimate kinase YP_109762.1 3773983 R 272560 CDS YP_109763.1 53720777 3094496 complement(3774618..3775946) 1 NC_006350.1 Similar to regions from larger proteins eg. Ralstonia solanacearum probable fimbrial type-4 assembly signal peptide protein PilQ or Rsc2971 or Rs01326 SWALL:Q8XV60 (EMBL:AL646073) (714 aa) fasta scores: E(): 5.7e-36, 49.16% id in 421 aa, and to Haemophilus influenzae competence protein E precursor or hi0435 SWALL:COME_HAEIN (SWALL:P31772) (445 aa) fasta scores: E(): 4.7e-31, 31.64% id in 414 aa; secretion system protein 3775946 3094496 BPSL3170 Burkholderia pseudomallei K96243 secretion system protein YP_109763.1 3774618 R 272560 CDS YP_109764.1 53720778 3092446 complement(3776333..3777292) 1 NC_006350.1 hypothetical protein 3777292 3092446 BPSL3171 Burkholderia pseudomallei K96243 hypothetical protein YP_109764.1 3776333 R 272560 CDS YP_109765.1 53720779 3092447 complement(3777289..3777969) 1 NC_006350.1 Similar to Ralstonia solanacearum probable fimbrial type-4 assembly membrane transmembrane protein PilN or Rsc2974 or Rs01323 SWALL:Q8XV57 (EMBL:AL646073) (210 aa) fasta scores: E(): 0.0057, 26.69% id in 206 aa; hypothetical protein 3777969 3092447 BPSL3172 Burkholderia pseudomallei K96243 hypothetical protein YP_109765.1 3777289 R 272560 CDS YP_109766.1 53720780 3092036 complement(3777966..3778913) 1 NC_006350.1 Similar to Ralstonia solanacearum probable fimbrial type-4 assembly protein PilM or Rsc2975 or Rs01321 SWALL:Q8XV56 (EMBL:AL646073) (356 aa) fasta scores: E(): 0.008, 26.94% id in 193 aa; hypothetical protein 3778913 3092036 BPSL3173 Burkholderia pseudomallei K96243 hypothetical protein YP_109766.1 3777966 R 272560 CDS YP_109767.1 53720781 3091939 3779227..3781548 1 NC_006350.1 Similar to Escherichia coli penicillin-binding protein 1A MrcA or PonA or b3396 SWALL:PBPA_ECOLI (SWALL:P02918) (850 aa) fasta scores: E(): 1.9e-88, 38.63% id in 818 aa; penicillin-binding protein 1A 3781548 mrcA 3091939 mrcA Burkholderia pseudomallei K96243 penicillin-binding protein 1A YP_109767.1 3779227 D 272560 CDS YP_109768.1 53720782 3091671 complement(3781664..3781990) 1 NC_006350.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 3781990 cyaY 3091671 cyaY Burkholderia pseudomallei K96243 frataxin-like protein YP_109768.1 3781664 R 272560 CDS YP_109769.1 53720783 3092037 3782027..3782311 1 NC_006350.1 lipoprotein 3782311 3092037 BPSL3175A Burkholderia pseudomallei K96243 lipoprotein YP_109769.1 3782027 D 272560 CDS YP_109770.1 53720784 3092477 3782322..3783593 1 NC_006350.1 Similar to Pseudomonas aeruginosa diaminopimelate decarboxylase LysA or Pa5277 SWALL:DCDA_PSEAE (SWALL:P19572) (415 aa) fasta scores: E(): 1.3e-95, 63.46% id in 416 aa; diaminopimelate decarboxylase 3783593 lysA 3092477 lysA Burkholderia pseudomallei K96243 diaminopimelate decarboxylase YP_109770.1 3782322 D 272560 CDS YP_109771.1 53720785 3094825 complement(3783852..3784565) 1 NC_006350.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ 3784565 3094825 BPSL3177 Burkholderia pseudomallei K96243 sulfite oxidase subunit YedZ YP_109771.1 3783852 R 272560 CDS YP_109772.1 53720786 3094826 complement(3784587..3785582) 1 NC_006350.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 3785582 3094826 BPSL3178 Burkholderia pseudomallei K96243 sulfite oxidase subunit YedY YP_109772.1 3784587 R 272560 CDS YP_109773.1 53720787 3091444 complement(3785760..3786950) 1 NC_006350.1 Similar to Chlamydomonas reinhardtii cytochrome c biogenesis protein CcsA SWALL:CCSA_CHLRE (SWALL:P48269) (353 aa) fasta scores: E(): 6.1e-29, 38.73% id in 253 aa, and to Ralstonia solanacearum transmembrane cytochrome c-type biogenesis transmembrane protein rsc2985 or rs01238 SWALL:Q8XV46 (EMBL:AL646073) (395 aa) fasta scores: E(): 4.1e-112, 72.2% id in 385 aa; cytochrome C biogenesis protein 3786950 3091444 BPSL3179 Burkholderia pseudomallei K96243 cytochrome C biogenesis protein YP_109773.1 3785760 R 272560 CDS YP_109774.1 53720788 3091445 complement(3786955..3789054) 1 NC_006350.1 Similar to Ralstonia solanacearum cytochrome c-type biogenesis transmembrane protein Rsc2986 or Rs01235 SWALL:Q8XV45 (EMBL:AL646073) (700 aa) fasta scores: E(): 2.4e-161, 60.98% id in 692 aa, and to Chlamydomonas reinhardtii Ccs1 SWALL:O50041 (EMBL:U71000) (613 aa) fasta scores: E(): 0.0016, 23.92% id in 418 aa; cytochrome C biogenesis protein 3789054 3091445 BPSL3180 Burkholderia pseudomallei K96243 cytochrome C biogenesis protein YP_109774.1 3786955 R 272560 CDS YP_109775.1 53720789 3094749 complement(3789263..3789910) 1 NC_006350.1 Similar to Azotobacter vinelandii cytochrome c4 precursor CycA SWALL:CYC4_AZOVI (SWALL:P43302) (210 aa) fasta scores: E(): 2.4e-25, 45.9% id in 220 aa; cytochrome C 3789910 3094749 BPSL3181 Burkholderia pseudomallei K96243 cytochrome C YP_109775.1 3789263 R 272560 CDS YP_109776.1 53720790 3093266 3790127..3790786 1 NC_006350.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3790786 engB 3093266 engB Burkholderia pseudomallei K96243 ribosome biogenesis GTP-binding protein YsxC YP_109776.1 3790127 D 272560 CDS YP_109777.1 53720791 3092987 3791004..3792068 1 NC_006350.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3792068 hemB 3092987 hemB Burkholderia pseudomallei K96243 delta-aminolevulinic acid dehydratase YP_109777.1 3791004 D 272560 CDS YP_109778.1 53720792 3094755 complement(3792284..3794167) 1 NC_006350.1 Similar to Escherichia coli thiol:disulfide interchange protein DsbD or DipZ or CycZ or CutA2 or b4136 SWALL:DSBD_ECOLI (SWALL:P36655) (565 aa) fasta scores: E(): 2e-23, 33.17% id in 612 aa, and to Ralstonia solanacearum thiol:disulfide interchange protein DsbD or Rsc2990 or Rs01128 SWALL:DSBD_RALSO (SWALL:Q8XV41) (608 aa) fasta scores: E(): 8.3e-68, 51.56% id in 607 aa; thiol:disulfide interchange protein DsbD 3794167 dsbD 3094755 dsbD Burkholderia pseudomallei K96243 thiol:disulfide interchange protein DsbD YP_109778.1 3792284 R 272560 CDS YP_109779.1 53720793 3094750 complement(3794160..3794510) 1 NC_006350.1 Similar to Escherichia coli periplasmic divalent cation tolerance protein cuta cuta or cycy or cuta1 or b4137 or z5742 or ecs5118 SWALL:CUTA_ECOLI (SWALL:P36654) (112 aa) fasta scores: E(): 1.4e-09, 35.51% id in 107 aa; periplasmic cytochrome biogenesis protein 3794510 3094750 BPSL3185 Burkholderia pseudomallei K96243 periplasmic cytochrome biogenesis protein YP_109779.1 3794160 R 272560 CDS YP_109780.1 53720794 3092315 complement(3794645..3795040) 1 NC_006350.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 3795040 rplQ 3092315 rplQ Burkholderia pseudomallei K96243 50S ribosomal protein L17 YP_109780.1 3794645 R 272560 CDS YP_109781.1 53720795 3094313 complement(3795181..3796158) 1 NC_006350.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 3796158 rpoA 3094313 rpoA Burkholderia pseudomallei K96243 DNA-directed RNA polymerase subunit alpha YP_109781.1 3795181 R 272560 CDS YP_109782.1 53720796 3091836 complement(3796286..3796909) 1 NC_006350.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 3796909 rpsD 3091836 rpsD Burkholderia pseudomallei K96243 30S ribosomal protein S4 YP_109782.1 3796286 R 272560 CDS YP_109783.1 53720797 3091468 complement(3797060..3797461) 1 NC_006350.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 3797461 rpsK 3091468 rpsK Burkholderia pseudomallei K96243 30S ribosomal protein S11 YP_109783.1 3797060 R 272560 CDS YP_109784.1 53720798 3093225 complement(3797485..3797850) 1 NC_006350.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 3797850 rpsM 3093225 rpsM Burkholderia pseudomallei K96243 30S ribosomal protein S13 YP_109784.1 3797485 R 272560 CDS YP_109785.1 53720799 3093066 complement(3797889..3798005) 1 NC_006350.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 3798005 rpmJ 3093066 rpmJ Burkholderia pseudomallei K96243 50S ribosomal protein L36 YP_109785.1 3797889 R 272560 CDS YP_109786.1 53720800 3093279 complement(3798026..3798244) 1 NC_006350.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 3798244 infA 3093279 infA Burkholderia pseudomallei K96243 translation initiation factor IF-1 YP_109786.1 3798026 R 272560 CDS YP_109787.2 161723191 3093078 complement(3798254..3799600) 1 NC_006350.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 3799600 secY 3093078 secY Burkholderia pseudomallei K96243 preprotein translocase subunit SecY YP_109787.2 3798254 R 272560 CDS YP_109788.1 53720802 3091743 complement(3799645..3800079) 1 NC_006350.1 late assembly protein; 50S ribosomal protein L15 3800079 rplO 3091743 rplO Burkholderia pseudomallei K96243 50S ribosomal protein L15 YP_109788.1 3799645 R 272560 CDS YP_109789.1 53720803 3092456 complement(3800108..3800290) 1 NC_006350.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 3800290 rpmD 3092456 rpmD Burkholderia pseudomallei K96243 50S ribosomal protein L30 YP_109789.1 3800108 R 272560 CDS YP_109790.1 53720804 3093329 complement(3800306..3800824) 1 NC_006350.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 3800824 rpsE 3093329 rpsE Burkholderia pseudomallei K96243 30S ribosomal protein S5 YP_109790.1 3800306 R 272560 CDS YP_109791.1 53720805 3094790 complement(3800838..3801203) 1 NC_006350.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 3801203 rplR 3094790 rplR Burkholderia pseudomallei K96243 50S ribosomal protein L18 YP_109791.1 3800838 R 272560 CDS YP_109792.1 53720806 3094341 complement(3801216..3801746) 1 NC_006350.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 3801746 rplF 3094341 rplF Burkholderia pseudomallei K96243 50S ribosomal protein L6 YP_109792.1 3801216 R 272560 CDS YP_109793.1 53720807 3092002 complement(3801767..3802162) 1 NC_006350.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 3802162 rpsH 3092002 rpsH Burkholderia pseudomallei K96243 30S ribosomal protein S8 YP_109793.1 3801767 R 272560 CDS YP_109794.1 53720808 3093226 complement(3802177..3802482) 1 NC_006350.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 3802482 rpsN 3093226 rpsN Burkholderia pseudomallei K96243 30S ribosomal protein S14 YP_109794.1 3802177 R 272560 CDS YP_109795.1 53720809 3094340 complement(3802490..3803029) 1 NC_006350.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 3803029 rplE 3094340 rplE Burkholderia pseudomallei K96243 50S ribosomal protein L5 YP_109795.1 3802490 R 272560 CDS YP_109796.1 53720810 3092826 complement(3803047..3803355) 1 NC_006350.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 3803355 rplX 3092826 rplX Burkholderia pseudomallei K96243 50S ribosomal protein L24 YP_109796.1 3803047 R 272560 CDS YP_109797.1 53720811 3093603 complement(3803365..3803733) 1 NC_006350.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 3803733 rplN 3093603 rplN Burkholderia pseudomallei K96243 50S ribosomal protein L14 YP_109797.1 3803365 R 272560 CDS YP_109798.1 53720812 3094358 complement(3804043..3804315) 1 NC_006350.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 3804315 rpsQ 3094358 rpsQ Burkholderia pseudomallei K96243 30S ribosomal protein S17 YP_109798.1 3804043 R 272560 CDS YP_109799.1 53720813 3091809 complement(3804312..3804506) 1 NC_006350.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 3804506 rpmC 3091809 rpmC Burkholderia pseudomallei K96243 50S ribosomal protein L29 YP_109799.1 3804312 R 272560 CDS YP_109800.1 53720814 3091744 complement(3804516..3804932) 1 NC_006350.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 3804932 rplP 3091744 rplP Burkholderia pseudomallei K96243 50S ribosomal protein L16 YP_109800.1 3804516 R 272560 CDS YP_109801.1 53720815 3091835 complement(3804935..3805735) 1 NC_006350.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 3805735 rpsC 3091835 rpsC Burkholderia pseudomallei K96243 30S ribosomal protein S3 YP_109801.1 3804935 R 272560 CDS YP_109802.1 53720816 3091434 complement(3805747..3806076) 1 NC_006350.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 3806076 rplV 3091434 rplV Burkholderia pseudomallei K96243 50S ribosomal protein L22 YP_109802.1 3805747 R 272560 CDS YP_109803.1 53720817 3091800 complement(3806089..3806364) 1 NC_006350.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 3806364 rpsS 3091800 rpsS Burkholderia pseudomallei K96243 30S ribosomal protein S19 YP_109803.1 3806089 R 272560 CDS YP_109804.1 53720818 3091929 complement(3806375..3807202) 1 NC_006350.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 3807202 rplB 3091929 rplB Burkholderia pseudomallei K96243 50S ribosomal protein L2 YP_109804.1 3806375 R 272560 CDS YP_109805.1 53720819 3092825 complement(3807205..3807519) 1 NC_006350.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 3807519 rplW 3092825 rplW Burkholderia pseudomallei K96243 50S ribosomal protein L23 YP_109805.1 3807205 R 272560 CDS YP_109806.1 53720820 3092051 complement(3807516..3808136) 1 NC_006350.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 3808136 rplD 3092051 rplD Burkholderia pseudomallei K96243 50S ribosomal protein L4 YP_109806.1 3807516 R 272560 CDS YP_109807.1 53720821 3091930 complement(3808136..3808795) 1 NC_006350.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 3808795 rplC 3091930 rplC Burkholderia pseudomallei K96243 50S ribosomal protein L3 YP_109807.1 3808136 R 272560 CDS YP_109808.1 53720822 3092443 complement(3808983..3809294) 1 NC_006350.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 3809294 rpsJ 3092443 rpsJ Burkholderia pseudomallei K96243 30S ribosomal protein S10 YP_109808.1 3808983 R 272560 CDS YP_109809.1 53720823 3091614 complement(3809447..3810637) 1 NC_006350.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 3810637 tuf 3091614 tuf Burkholderia pseudomallei K96243 elongation factor Tu YP_109809.1 3809447 R 272560 CDS YP_109810.1 53720824 3092466 complement(3810679..3812781) 1 NC_006350.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 3812781 fusA 3092466 fusA Burkholderia pseudomallei K96243 elongation factor G YP_109810.1 3810679 R 272560 CDS YP_109811.1 53720825 3093549 complement(3812903..3813373) 1 NC_006350.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 3813373 rpsG 3093549 rpsG Burkholderia pseudomallei K96243 30S ribosomal protein S7 YP_109811.1 3812903 R 272560 CDS YP_109812.1 53720826 3091469 complement(3813544..3813924) 1 NC_006350.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 3813924 rpsL 3091469 rpsL Burkholderia pseudomallei K96243 30S ribosomal protein S12 YP_109812.1 3813544 R 272560 CDS YP_109813.1 53720827 3092367 complement(3814140..3816074) 1 NC_006350.1 Similar to Escherichia coli ATP-dependent DNA helicase RecQ or b3822 SWALL:RECQ_ECOLI (SWALL:P15043) (607 aa) fasta scores: E(): 2.8e-77, 44.62% id in 614 aa, and to Ralstonia solanacearum probable ATP-dependent DNA helicase RecQ or Rsc3025 or Rs04732 SWALL:Q8XV07 (EMBL:AL646073) (637 aa) fasta scores: E(): 7.7e-178, 72.38% id in 630 aa; ATP-dependent DNA helicase RecQ 3816074 recQ 3092367 recQ Burkholderia pseudomallei K96243 ATP-dependent DNA helicase RecQ YP_109813.1 3814140 R 272560 CDS YP_109814.1 53720828 3094314 complement(3816188..3820426) 1 NC_006350.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 3820426 rpoC 3094314 rpoC Burkholderia pseudomallei K96243 DNA-directed RNA polymerase subunit beta' YP_109814.1 3816188 R 272560 CDS YP_109815.1 53720829 3092566 complement(3820448..3824554) 1 NC_006350.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 3824554 rpoB 3092566 rpoB Burkholderia pseudomallei K96243 DNA-directed RNA polymerase subunit beta YP_109815.1 3820448 R 272560 CDS YP_109816.1 53720830 3093065 complement(3824918..3825250) 1 NC_006350.1 Similar to Neisseria meningitidis 50S ribosomal protein L7/L12 RplL or NMA0143 or nmb0131 SWALL:RL7_NEIMA (SWALL:P80716) (122 aa) fasta scores: E(): 4.2e-23, 76.36% id in 110 aa; 50S ribosomal protein L7/L12 3825250 rplL 3093065 rplL Burkholderia pseudomallei K96243 50S ribosomal protein L7/L12 YP_109816.1 3824918 R 272560 CDS YP_109817.1 53720831 3093181 complement(3825356..3825853) 1 NC_006350.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 3825853 rplJ 3093181 rplJ Burkholderia pseudomallei K96243 50S ribosomal protein L10 YP_109817.1 3825356 R 272560 CDS YP_109818.1 53720832 3094104 complement(3826151..3826849) 1 NC_006350.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 3826849 rplA 3094104 rplA Burkholderia pseudomallei K96243 50S ribosomal protein L1 YP_109818.1 3826151 R 272560 CDS YP_109819.1 53720833 3092790 complement(3826850..3827281) 1 NC_006350.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 3827281 rplK 3092790 rplK Burkholderia pseudomallei K96243 50S ribosomal protein L11 YP_109819.1 3826850 R 272560 CDS YP_109820.1 53720834 3094405 complement(3827427..3827984) 1 NC_006350.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 3827984 nusG 3094405 nusG Burkholderia pseudomallei K96243 transcription antitermination protein NusG YP_109820.1 3827427 R 272560 CDS YP_109821.1 53720835 3092983 complement(3827986..3828366) 1 NC_006350.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 3828366 secE 3092983 secE Burkholderia pseudomallei K96243 preprotein translocase subunit SecE YP_109821.1 3827986 R 272560 CDS YP_109822.1 53720836 3092631 complement(3828544..3829734) 1 NC_006350.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 3829734 tuf 3092631 tuf Burkholderia pseudomallei K96243 elongation factor Tu YP_109822.1 3828544 R 272560 CDS YP_109823.1 53720837 3092567 complement(3836722..3837999) 1 NC_006350.1 Similar to Rhizobium loti secreted protein Mlr4086 SWALL:Q98EU1 (EMBL:AP003003) (426 aa) fasta scores: E(): 1.9e-42, 39.85% id in 419 aa; hypothetical protein 3837999 3092567 BPSL3229 Burkholderia pseudomallei K96243 hypothetical protein YP_109823.1 3836722 R 272560 CDS YP_109824.1 53720838 3091478 3838612..3839610 1 NC_006350.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 3839610 paaA 3091478 paaA Burkholderia pseudomallei K96243 phenylacetate-CoA oxygenase subunit PaaA YP_109824.1 3838612 D 272560 CDS YP_109825.1 53720839 3091479 3839673..3839957 1 NC_006350.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 3839957 paaB 3091479 paaB Burkholderia pseudomallei K96243 phenylacetate-CoA oxygenase subunit PaaB YP_109825.1 3839673 D 272560 CDS YP_109826.1 53720840 3092940 3839968..3840771 1 NC_006350.1 Similar to Escherichia coli phenylacetic acid degradation protein PaaC or b1390 SWALL:PAAC_ECOLI (SWALL:P76079) (248 aa) fasta scores: E(): 5e-21, 43.51% id in 262 aa; phenylacetic acid degradation protein PaaC 3840771 paaC 3092940 paaC Burkholderia pseudomallei K96243 phenylacetic acid degradation protein PaaC YP_109826.1 3839968 D 272560 CDS YP_109827.1 53720841 3092941 3840807..3841427 1 NC_006350.1 Similar to Escherichia coli phenylacetic acid degradation protein PaaD or b1391 SWALL:PAAD_ECOLI (SWALL:P76080) (167 aa) fasta scores: E(): 1.1e-15, 49.12% id in 171 aa; phenylacetic acid degradation protein PaaD 3841427 paaD 3092941 paaD Burkholderia pseudomallei K96243 phenylacetic acid degradation protein PaaD YP_109827.1 3840807 D 272560 CDS YP_109828.1 53720842 3092362 3841429..3842517 1 NC_006350.1 Similar to Escherichia coli probable phenylacetic acid degradation NADH oxidoreductase PaaE or b1392 SWALL:PAAE_ECOLI (SWALL:P76081) (356 aa) fasta scores: E(): 1.9e-58, 47.05% id in 357 aa; phenylacetic acid degradation NADH oxidoreductase PaaE 3842517 paaE 3092362 paaE Burkholderia pseudomallei K96243 phenylacetic acid degradation NADH oxidoreductase PaaE YP_109828.1 3841429 D 272560 CDS YP_109829.1 53720843 3093303 3842639..3843469 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc3094 or Rs00547 SWALL:Q8XUU1 (EMBL:AL646073) (264 aa) fasta scores: E(): 2.3e-38, 41.97% id in 274 aa; hypothetical protein 3843469 3093303 BPSL3235 Burkholderia pseudomallei K96243 hypothetical protein YP_109829.1 3842639 D 272560 CDS YP_109830.1 53720844 3093304 3843496..3844095 1 NC_006350.1 Similar to many eg. Ralstonia solanacearum probable transcription regulator protein Rsp0613 or Rs03754 SWALL:Q8XS68 (EMBL:AL646079) (215 aa) fasta scores: E(): 5.1e-42, 59% id in 200 aa, and to Streptomyces coelicolor TetR-family transcriptional regulator SCO3129 or SCE66.08 SWALL:Q9K3T5 (EMBL:AL359989) (225 aa) fasta scores: E(): 3.6e-06, 27.77% id in 198 aa; TetR family transcriptional regulator 3844095 3093304 BPSL3236 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_109830.1 3843496 D 272560 CDS YP_109831.1 53720845 3094132 3844299..3844985 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc3098 or Rs00551 SWALL:Q8XUT7 (EMBL:AL646073) (231 aa) fasta scores: E(): 1.2e-44, 59.34% id in 214 aa; hypothetical protein 3844985 3094132 BPSL3237 Burkholderia pseudomallei K96243 hypothetical protein YP_109831.1 3844299 D 272560 CDS YP_109832.1 53720846 3094133 complement(3845104..3845619) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transcription regulator protein Rsc3102 or Rs00555 SWALL:Q8XUT3 (EMBL:AL646073) (162 aa) fasta scores: E(): 6.2e-19, 65.88% id in 170 aa, and to Escherichia coli leucine-responsive regulatory protein Lrp or b0889 or z1234 or ecs0974 SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 2.5e-10, 43.11% id in 167 aa; AsnC family transcriptional regulator 3845619 3094133 BPSL3238 Burkholderia pseudomallei K96243 AsnC family transcriptional regulator YP_109832.1 3845104 R 272560 CDS YP_109833.1 53720847 3091429 3845771..3846868 1 NC_006350.1 Similar to Pseudomonas sp. 4-hydroxyphenylpyruvate dioxygenase SWALL:HPPD_PSESP (SWALL:P80064) (357 aa) fasta scores: E(): 5.7e-37, 57.89% id in 361 aa; 4-hydroxyphenylpyruvate dioxygenase 3846868 3091429 BPSL3239 Burkholderia pseudomallei K96243 4-hydroxyphenylpyruvate dioxygenase YP_109833.1 3845771 D 272560 CDS YP_109834.1 53720848 3091430 complement(3847104..3847301) 1 NC_006350.1 outer membrane protein 3847301 3091430 BPSL3240 Burkholderia pseudomallei K96243 outer membrane protein YP_109834.1 3847104 R 272560 CDS YP_109835.1 53720849 3091567 3847621..3851202 1 NC_006350.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 3851202 3091567 BPSL3241 Burkholderia pseudomallei K96243 indolepyruvate ferredoxin oxidoreductase YP_109835.1 3847621 D 272560 CDS YP_109836.1 53720850 3091568 complement(3851722..3853992) 1 NC_006350.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3853992 3091568 BPSL3242 Burkholderia pseudomallei K96243 malic enzyme YP_109836.1 3851722 R 272560 CDS YP_109837.1 53720851 3093840 3854521..3855207 1 NC_006350.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 3855207 pyrE 3093840 pyrE Burkholderia pseudomallei K96243 orotate phosphoribosyltransferase YP_109837.1 3854521 D 272560 CDS YP_109838.1 53720852 3091870 3855508..3856104 1 NC_006350.1 Similar to many eg. Salmonella typhimurium outer membrane protein Stm1081 SWALL:Q8ZQ63 (EMBL:AE008747) (182 aa) fasta scores: E(): 1.9e-24, 43.95% id in 182 aa; lipoprotein 3856104 3091870 BPSL3244 Burkholderia pseudomallei K96243 lipoprotein YP_109838.1 3855508 D 272560 CDS YP_109839.1 53720853 3091871 3856491..3857066 1 NC_006350.1 Similar to Ralstonia solanacearum Trp repressor binding protein homolog Rsc2207 or Rs01392 SWALL:Q8XXA9 (EMBL:AL646068) (190 aa) fasta scores: E(): 8.1e-48, 65.42% id in 188 aa, and to Escherichia coli flavoprotein WrbA or b1004 SWALL:WRBA_ECOLI (SWALL:P30849) (197 aa) fasta scores: E(): 0.0024, 26.15% id in 195 aa; flavoprotein (regulator) 3857066 3091871 BPSL3245 Burkholderia pseudomallei K96243 flavoprotein (regulator) YP_109839.1 3856491 D 272560 CDS YP_109840.1 53720854 3092981 3857219..3858163 1 NC_006350.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 3858163 argC 3092981 argC Burkholderia pseudomallei K96243 N-acetyl-gamma-glutamyl-phosphate reductase YP_109840.1 3857219 D 272560 CDS YP_109841.1 53720855 3091902 3858608..3860011 1 NC_006350.1 lipoprotein 3860011 3091902 BPSL3247 Burkholderia pseudomallei K96243 lipoprotein YP_109841.1 3858608 D 272560 CDS YP_109842.1 53720856 3091903 3860137..3861387 1 NC_006350.1 lipoprotein 3861387 3091903 BPSL3248 Burkholderia pseudomallei K96243 lipoprotein YP_109842.1 3860137 D 272560 CDS YP_109843.1 53720857 3094605 3861407..3862237 1 NC_006350.1 Similar to Ralstonia solanacearum outer membrane W signal peptide protein OmpW or Rsc3350 or Rs02625 SWALL:Q8XU43 (EMBL:AL646074) (241 aa) fasta scores: E(): 5.7e-11, 40.94% id in 276 aa, and to Escherichia coli outer membrane protein W precursor OmpW or b1256 SWALL:OMPW_ECOLI (SWALL:P21364) (212 aa) fasta scores: E(): 0.36, 24.54% id in 277 aa; outer membrane protein 3862237 3094605 BPSL3249 Burkholderia pseudomallei K96243 outer membrane protein YP_109843.1 3861407 D 272560 CDS YP_109844.1 53720858 3094606 complement(3862424..3863362) 1 NC_006350.1 Similar to Rhizobium loti probable transcriptional regulator Mll2263 SWALL:Q98IT2 (EMBL:AP002999) (304 aa) fasta scores: E(): 7.9e-50, 50.51% id in 291 aa, and to Erwinia carotovora hydrogen peroxide-inducible genes activator OxyR SWALL:OXYR_ERWCA (SWALL:P71318) (302 aa) fasta scores: E(): 4.5e-12, 27.81% id in 302 aa; LysR family transcriptional regulator 3863362 3094606 BPSL3250 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_109844.1 3862424 R 272560 CDS YP_109845.1 53720859 3094008 3863545..3864726 1 NC_006350.1 Similar to Rhizobium loti probable antibiotic resistance protein Mlr2264 SWALL:Q98IT1 (EMBL:AP002999) (407 aa) fasta scores: E(): 1.3e-66, 54.1% id in 390 aa, and to Escherichia coli sugar efflux transporter SotB or b1528 SWALL:SOTB_ECOLI (SWALL:P31122) (396 aa) fasta scores: E(): 2.8e-05, 22.59% id in 385 aa; inner membrane transport protein 3864726 3094008 BPSL3251 Burkholderia pseudomallei K96243 inner membrane transport protein YP_109845.1 3863545 D 272560 CDS YP_109846.1 53720860 3094009 complement(3864817..3865575) 1 NC_006350.1 Similar to Agrobacterium tumefaciens homoserine/homoserine lactone efflux protein RhtB or Atu1864 or agr_c_3421 SWALL:Q8UE96 (EMBL:AE009140) (273 aa) fasta scores: E(): 5.7e-11, 36.19% id in 221 aa, and to Escherichia coli homoserine/homoserine lactone efflux protein RhtB or b3824 or z5345 or ecs4754 SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 2.8e-08, 33.92% id in 224 aa; amino acid transport protein 3865575 3094009 BPSL3252 Burkholderia pseudomallei K96243 amino acid transport protein YP_109846.1 3864817 R 272560 CDS YP_109847.1 53720861 3091993 complement(3865584..3866453) 1 NC_006350.1 Similar to Xanthomonas campestris dehydrogenase Xcc0308 SWALL:AAM39627 (EMBL:AE012127) (291 aa) fasta scores: E(): 5e-49, 53.1% id in 290 aa, and to Pseudomonas cruciviae D-threonine dehydrogenase DtdS SWALL:Q9ZNH7 (EMBL:AB015439) (292 aa) fasta scores: E(): 5.4e-14, 29.06% id in 289 aa; oxidoreductase 3866453 3091993 BPSL3253 Burkholderia pseudomallei K96243 oxidoreductase YP_109847.1 3865584 R 272560 CDS YP_109848.1 53720862 3091994 3866580..3867335 1 NC_006350.1 Similar to many eg. Mycobacterium tuberculosis hypothetical protein Rv0579 or Mt0608.1 or mtv039.17 SWALL:O53776 (EMBL:AL021942) (252 aa) fasta scores: E(): 2.8e-35, 45.3% id in 245 aa; hypothetical protein 3867335 3091994 BPSL3254 Burkholderia pseudomallei K96243 hypothetical protein YP_109848.1 3866580 D 272560 CDS YP_109849.1 53720863 3092086 3867516..3867743 1 NC_006350.1 hypothetical protein 3867743 3092086 BPSL3254A Burkholderia pseudomallei K96243 hypothetical protein YP_109849.1 3867516 D 272560 CDS YP_109850.1 53720864 3092087 3868783..3869190 1 NC_006350.1 hypothetical protein 3869190 3092087 BPSL3254B Burkholderia pseudomallei K96243 hypothetical protein YP_109850.1 3868783 D 272560 CDS YP_109851.1 53720865 3093734 complement(3870399..3870716) 1 NC_006350.1 hypothetical protein 3870716 3093734 BPSL3255 Burkholderia pseudomallei K96243 hypothetical protein YP_109851.1 3870399 R 272560 CDS YP_109852.1 53720866 3093735 3871231..3872637 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable amino acid permease Pa0789 SWALL:Q9I5E9 (EMBL:AE004514) (471 aa) fasta scores: E(): 1.2e-131, 74.5% id in 451 aa, and to Salmonella typhimurium proline-specific permease ProY or Stm0400 SWALL:PROY_SALTY (SWALL:P37460) (456 aa) fasta scores: E(): 5.6e-98, 56.72% id in 439 aa; amino acid permease 3872637 3093735 BPSL3256 Burkholderia pseudomallei K96243 amino acid permease YP_109852.1 3871231 D 272560 CDS YP_109853.1 53720867 3092082 3873083..3874084 1 NC_006350.1 Similar to plasmid and pathogenicity island recombinases eg. Xanthomonas axonopodis shufflon-specific recombinase Rci or Xac2418 SWALL:AAM37269 (EMBL:AE011879) (315 aa) fasta scores: E(): 2.6e-24, 63.96% id in 333 aa, and to Salmonella typhi, and Salmonella dublin Rci or Sty4552 SWALL:O51802 (EMBL:AF000001) (383 aa) fasta scores: E(): 6.2e-07, 34.25% id in 327 aa, and to Escherichia coli shufflon-specific DNA recombinase Rci SWALL:RCI2_ECOLI (SWALL:P16470) (384 aa) fasta scores: E(): 1.3e-06, 35.78% id in 327 aa; plasmid recombinase 3874084 3092082 BPSL3257 Burkholderia pseudomallei K96243 plasmid recombinase YP_109853.1 3873083 D 272560 CDS YP_109854.1 53720868 3092083 3874162..3876582 1 NC_006350.1 Similar to Campylobacter jejuni hypothetical protein RloE SWALL:Q8RN16 (EMBL:AF486555) (800 aa) fasta scores: E(): 3.7e-58, 34.92% id in 839 aa, and to Chlorobium tepidum hypothetical protein Ct0683 SWALL:AAM71921 (EMBL:AE012840) (767 aa) fasta scores: E(): 9e-12, 26.8% id in 802 aa. Contains PF02370 M protein repeats which are associated with virulence in group A Streptococci; hypothetical protein 3876582 3092083 BPSL3258 Burkholderia pseudomallei K96243 hypothetical protein YP_109854.1 3874162 D 272560 CDS YP_109855.1 53720869 3092740 complement(3876611..3876817) 1 NC_006350.1 Similar to Escherichia coli TraD protein traD SWALL:TRD5_ECOLI (SWALL:P27192) (129 aa) fasta scores: E(): 5.7e-05, 56.25% id in 48 aa; plasmid conjugal transfer protein 3876817 3092740 BPSL3259 Burkholderia pseudomallei K96243 plasmid conjugal transfer protein YP_109855.1 3876611 R 272560 CDS YP_109856.1 53720870 3092741 complement(3876826..3877173) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa4674 SWALL:Q9HVC1 (EMBL:AE004881) (101 aa) fasta scores: E(): 0.00078, 35.86% id in 92 aa, and to Bacteroides nodosus virulence-associated protein A' VapA' SWALL:VAPZ_BACNO (SWALL:Q46561) (115 aa) fasta scores: E(): 0.0012, 35.29% id in 85 aa; hypothetical protein 3877173 3092741 BPSL3260 Burkholderia pseudomallei K96243 hypothetical protein YP_109856.1 3876826 R 272560 CDS YP_109857.1 53720871 3094808 complement(3877164..3877454) 1 NC_006350.1 hypothetical protein 3877454 3094808 BPSL3261 Burkholderia pseudomallei K96243 hypothetical protein YP_109857.1 3877164 R 272560 CDS YP_109858.1 53720872 3094809 complement(3877520..3878950) 1 NC_006350.1 Similar to Enterobacter aerogenes IncP plasmid conjugal transfer protein TrbL SWALL:P71187 (EMBL:U67194) (572 aa) fasta scores: E(): 8.9e-53, 44.11% id in 544 aa, and to Escherichia coli IncP plasmid conjugal transfer protein TrbL SWALL:Q03536 (EMBL:M93696) (528 aa) fasta scores: E(): 1.8e-50, 44.82% id in 522 aa; plasmid conjugal transfer protein 3878950 3094809 BPSL3262 Burkholderia pseudomallei K96243 plasmid conjugal transfer protein YP_109858.1 3877520 R 272560 CDS YP_109859.1 53720873 3094415 complement(3879171..3879950) 1 NC_006350.1 Similar to Escherichia coli plasmid congugal transfer entry exclusion protein A EexA or TrbJ SWALL:Q03534 (EMBL:M93696) (258 aa) fasta scores: E(): 1.9e-45, 56.03% id in 257 aa, and to Agrobacterium rhizogenes rooting plasmid Riorf126 SWALL:Q9F5C6 (EMBL:AP002086) (265 aa) fasta scores: E(): 1.1e-06, 27.31% id in 205 aa; conjugal transfer protein TrbJ 3879950 3094415 BPSL3263 Burkholderia pseudomallei K96243 conjugal transfer protein TrbJ YP_109859.1 3879171 R 272560 CDS YP_109860.1 53720874 3094416 complement(3880126..3882111) 1 NC_006350.1 Similar to Escherichia coli RP4 conjugal transfer protein TraI SWALL:TRI5_ECOLI (SWALL:Q00192) (747 aa) fasta scores: E(): 2.6e-124, 52.79% id in 752 aa; conjugal transfer relaxase TraI 3882111 3094416 BPSL3264 Burkholderia pseudomallei K96243 conjugal transfer relaxase TraI YP_109860.1 3880126 R 272560 CDS YP_109861.1 53720875 3092592 complement(3882108..3882494) 1 NC_006350.1 Similar to Escherichia coli plasmid RP4 conjugal transfer protein TraJ SWALL:TRJ6_ECOLI (SWALL:P17909) (122 aa) fasta scores: E(): 6.9e-26, 66.37% id in 116 aa; conjugal transfer relaxosome component TraJ 3882494 3092592 BPSL3265 Burkholderia pseudomallei K96243 conjugal transfer relaxosome component TraJ YP_109861.1 3882108 R 272560 CDS YP_109862.1 53720876 3092593 complement(3882778..3883023) 1 NC_006350.1 Doubtful CDS. No significant database matches; hypothetical protein 3883023 3092593 BPSL3266 Burkholderia pseudomallei K96243 hypothetical protein YP_109862.1 3882778 R 272560 CDS YP_109863.1 53720877 3091942 3883136..3883873 1 NC_006350.1 hypothetical protein 3883873 3091942 BPSL3267 Burkholderia pseudomallei K96243 hypothetical protein YP_109863.1 3883136 D 272560 CDS YP_109864.1 53720878 3091943 3884037..3884951 1 NC_006350.1 hypothetical protein 3884951 3091943 BPSL3268 Burkholderia pseudomallei K96243 hypothetical protein YP_109864.1 3884037 D 272560 CDS YP_109865.1 53720879 3094869 3884981..3885775 1 NC_006350.1 hypothetical protein 3885775 3094869 BPSL3269 Burkholderia pseudomallei K96243 hypothetical protein YP_109865.1 3884981 D 272560 CDS YP_109866.1 53720880 3094870 complement(3886322..3887254) 1 NC_006350.1 Similar to plasmid replication proteins eg. Escherichia coli broad-host-range plasmid pIPO2T RepA protein SWALL:Q91UU9 (EMBL:AJ297913) (462 aa) fasta scores: E(): 5.3e-50, 43.13% id in 306 aa, and to Shigella flexneri pSa plasmid replication protein RepA SWALL:Q04559 (EMBL:U30471) (323 aa) fasta scores: E(): 8.5e-40, 38.72% id in 297 aa; plasmid replication protein 3887254 3094870 BPSL3270 Burkholderia pseudomallei K96243 plasmid replication protein YP_109866.1 3886322 R 272560 CDS YP_109867.1 53720881 3093717 complement(3888315..3888662) 1 NC_006350.1 Similar to Pseudomonas aeruginosa cytochrome c-551 precursor NirM or PA0518 SWALL:C551_PSEAE (SWALL:P00099) (104 aa) fasta scores: E(): 3.9e-09, 37.93% id in 87 aa. Possible alternative translational start sites; cytochrome c-551 3888662 3093717 BPSL3271 Burkholderia pseudomallei K96243 cytochrome c-551 YP_109867.1 3888315 R 272560 CDS YP_109868.1 53720882 3093718 complement(3888677..3889477) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein Rsc3264 or Rs02493 SWALL:Q8XUC7 (EMBL:AL646074) (271 aa) fasta scores: E(): 7.4e-23, 41.79% id in 256 aa; lipoprotein 3889477 3093718 BPSL3272 Burkholderia pseudomallei K96243 lipoprotein YP_109868.1 3888677 R 272560 CDS YP_109869.1 53720883 3092692 complement(3889496..3890074) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable phosphoheptose isomerase Pa4425 SWALL:Q9HVZ0 (EMBL:AE004857) (197 aa) fasta scores: E(): 3.4e-25, 45.55% id in 191 aa, and to Burkholderia pseudomallei GmhA SWALL:Q93UJ2 (EMBL:AF228583) (197 aa) fasta scores: E(): 6.5e-15, 35.97% id in 189 aa, and to Aneurinibacillus thermoaerophilus sedoheptulose 7-phosphate isomerase GmhA SWALL:Q9AGY7 (EMBL:AF324836) (198 aa) fasta scores: E(): 2.2e-13, 35.75% id in 193 aa; phosphosugar isomerase 3890074 3092692 BPSL3273 Burkholderia pseudomallei K96243 phosphosugar isomerase YP_109869.1 3889496 R 272560 CDS YP_109870.1 53720884 3092693 complement(3890197..3890631) 1 NC_006350.1 Similar to many eg. Yersinia pestis hypothetical protein Ypo3549 SWALL:Q8ZB75 (EMBL:AJ414157) (117 aa) fasta scores: E(): 8.5e-18, 55.55% id in 117 aa; hypothetical protein 3890631 3092693 BPSL3274 Burkholderia pseudomallei K96243 hypothetical protein YP_109870.1 3890197 R 272560 CDS YP_109871.1 53720885 3092130 3890678..3891565 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc3266 rsc3266 or rs02495 SWALL:Q8XUC5 (EMBL:AL646074) (300 aa) fasta scores: E(): 2.7e-59, 63.79% id in 290 aa, and to Salmonella typhimurium methyltransferase yral or stm3263 SWALL:Q8ZLU5 (EMBL:AE008850) (287 aa) fasta scores: E(): 1.7e-41, 49.82% id in 281 aa; methylase 3891565 3092130 BPSL3275 Burkholderia pseudomallei K96243 methylase YP_109871.1 3890678 D 272560 CDS YP_109872.1 53720886 3092131 complement(3891660..3892295) 1 NC_006350.1 Similar to Pseudomonas aeruginosa RlpA-like lipoprotein precursor or Pa4000 SWALL:RLPA_PSEAE (SWALL:Q9X6V6) (342 aa) fasta scores: E(): 1.5e-20, 43.01% id in 186 aa, and to Escherichia coli rare lipoprotein a precursor RlpA or b0633 SWALL:RLPA_ECOLI (SWALL:P10100) (362 aa) fasta scores: E(): 2.5e-09, 39.51% id in 124 aa; RlpA-like lipoprotein 3892295 3092131 BPSL3276 Burkholderia pseudomallei K96243 RlpA-like lipoprotein YP_109872.1 3891660 R 272560 CDS YP_109873.1 53720887 3093505 3892896..3893540 1 NC_006350.1 Similar to Yersinia pestis metallo-beta-lactamase superfamily protein Ypo1409 SWALL:Q8ZG96 (EMBL:AJ414148) (215 aa) fasta scores: E(): 6.4e-53, 59.15% id in 213 aa; metallo-beta-lactamase superfamily protein 3893540 3093505 BPSL3277 Burkholderia pseudomallei K96243 metallo-beta-lactamase superfamily protein YP_109873.1 3892896 D 272560 CDS YP_109874.1 53720888 3093506 3893537..3894193 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein Rsc3269 or Rs02498 SWALL:Q8XUC2 (EMBL:AL646074) (226 aa) fasta scores: E(): 1.5e-62, 73.73% id in 198 aa; hypothetical protein 3894193 3093506 BPSL3278 Burkholderia pseudomallei K96243 hypothetical protein YP_109874.1 3893537 D 272560 CDS YP_109875.1 53720889 3093067 3894251..3894742 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3965 SWALL:Q9HX51 (EMBL:AE004814) (169 aa) fasta scores: E(): 4.7e-22, 45.16% id in 155 aa, and to Pseudomonas putida bkd operon transcriptional regulator BkdR SWALL:BKDR_PSEPU (SWALL:P42179) (161 aa) fasta scores: E(): 2.3e-19, 40.66% id in 150 aa; AsnC family transcriptional regulator 3894742 3093067 BPSL3279 Burkholderia pseudomallei K96243 AsnC family transcriptional regulator YP_109875.1 3894251 D 272560 CDS YP_109876.1 53720890 3093068 complement(3894921..3896111) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein Rsc3077 or Rs00528 SWALL:Q8XUV6 (EMBL:AL646073) (392 aa) fasta scores: E(): 4e-59, 49.1% id in 389 aa, and to Methanosarcina mazei cobalt-zinc-cadmium resistance protein CzcD or Mm1778 SWALL:AAM31474 (EMBL:AE013414) (323 aa) fasta scores: E(): 7.6e-31, 38.9% id in 293 aa; cation efflux protein 3896111 3093068 BPSL3280 Burkholderia pseudomallei K96243 cation efflux protein YP_109876.1 3894921 R 272560 CDS YP_109877.1 53720891 3092211 complement(3896351..3896644) 1 NC_006350.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein Rsp0335 or Rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 5.6e-14, 52.57% id in 97 aa, and to Rhodobacter sphaeroides SpB=leucine-zipper transcription factor/trans-acting light-dependent negative puf operon regulator Spb SWALL:P95680 (EMBL:S82916) (104 aa) fasta scores: E(): 0.00027, 35.64% id in 101 aa; HNS-like transcriptional regulator 3896644 3092211 BPSL3281 Burkholderia pseudomallei K96243 HNS-like transcriptional regulator YP_109877.1 3896351 R 272560 CDS YP_109878.1 53720892 3092212 complement(3897029..3897835) 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa4388 SWALL:Q9HW16 (EMBL:AE004854) (244 aa) fasta scores: E(): 1.4e-14, 34.45% id in 209 aa; hypothetical protein 3897835 3092212 BPSL3282 Burkholderia pseudomallei K96243 hypothetical protein YP_109878.1 3897029 R 272560 CDS YP_109879.1 53720893 3094655 3898112..3899230 1 NC_006350.1 Similar to many membrane proteins, e.g. Ralstonia solanacearum transport transmembrane protein Rsc0585 or Rs04878 SWALL:Q8Y1V4 (EMBL:AL646060) (408 aa) fasta scores: E(): 4.8e-58, 48.85% id in 393 aa; hypothetical protein 3899230 3094655 BPSL3283 Burkholderia pseudomallei K96243 hypothetical protein YP_109879.1 3898112 D 272560 CDS YP_109880.1 53720894 3094656 complement(3899419..3900561) 1 NC_006350.1 Similar to Ralstonia solanacearum amino acid-binding periplasmic ABC transporter protein Rsc2441 or Rs01353 SWALL:Q8XWN2 (EMBL:AL646070) (336 aa) fasta scores: E(): 7.2e-88, 74.1% id in 336 aa, and to Escherichia coli leucine-specific binding protein precursor LivK or b3458 SWALL:LIVK_ECOLI (SWALL:P04816) (369 aa) fasta scores: E(): 5.4e-31, 34.77% id in 348 aa; secreted substrate binding protein 3900561 3094656 BPSL3284 Burkholderia pseudomallei K96243 secreted substrate binding protein YP_109880.1 3899419 R 272560 CDS YP_109881.1 53720895 3092009 complement(3901018..3902118) 1 NC_006350.1 Similar to many members of a faimily including Xanthomonas campestris 2-nitropropane dioxygenase Xcc1197 SWALL:AAM40495 (EMBL:AE012219) (364 aa) fasta scores: E(): 1.7e-37, 42.73% id in 358 aa, and to Neurospora crassa 2-nitropropane dioxygenase precursor Ncd-2 SWALL:2NPD_NEUCR (SWALL:Q01284) (378 aa) fasta scores: E(): 8.5e-08, 26.87% id in 346 aa; oxidoreductase 3902118 3092009 BPSL3285 Burkholderia pseudomallei K96243 oxidoreductase YP_109881.1 3901018 R 272560 CDS YP_109882.1 53720896 3092010 3902445..3903137 1 NC_006350.1 Similar to Pseudomonas sp. CA10 dienelactone hydrolase SWALL:Q9AQN6 (EMBL:AB047548) (273 aa) fasta scores: E(): 5.3e-32, 45.16% id in 217 aa, and to Pseudomonas putida, and Pseudomonas sp. carboxymethylenebutenolidase ClcD SWALL:CLCD_PSEPU (SWALL:P11453) (236 aa) fasta scores: E(): 9.8e-23, 35.37% id in 229 aa; dienelactone hydrolase 3903137 3092010 BPSL3286 Burkholderia pseudomallei K96243 dienelactone hydrolase YP_109882.1 3902445 D 272560 CDS YP_109883.1 53720897 3093499 3903233..3904723 1 NC_006350.1 Similar to Flavobacterium sp. 6-aminohexanoate-cyclic-dimer hydrolase NylA SWALL:NYLA_FLASK (SWALL:P13397) (492 aa) fasta scores: E(): 1.8e-41, 36.27% id in 499 aa; amidase 3904723 3093499 BPSL3287 Burkholderia pseudomallei K96243 amidase YP_109883.1 3903233 D 272560 CDS YP_109884.1 53720898 3092005 complement(3904907..3905737) 1 NC_006350.1 Similar to Escherichia coli 5,10-methylenetetrahydrofolate reductase MetF or b3941 SWALL:METF_ECOLI (SWALL:P00394) (296 aa) fasta scores: E(): 1.3e-44, 45.98% id in 274 aa; 5,10-methylenetetrahydrofolate reductase 3905737 metF 3092005 metF Burkholderia pseudomallei K96243 5,10-methylenetetrahydrofolate reductase YP_109884.1 3904907 R 272560 CDS YP_109885.1 53720899 3093500 complement(3905755..3906108) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein Rsc0092 or Rs02279 SWALL:Q8Y388 (EMBL:AL646057) (113 aa) fasta scores: E(): 4.8e-21, 55.85% id in 111 aa; hypothetical protein 3906108 3093500 BPSL3289 Burkholderia pseudomallei K96243 hypothetical protein YP_109885.1 3905755 R 272560 CDS YP_109886.1 53720900 3092196 complement(3906272..3907693) 1 NC_006350.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 3907693 ahcY 3092196 ahcY Burkholderia pseudomallei K96243 S-adenosyl-L-homocysteine hydrolase YP_109886.1 3906272 R 272560 CDS YP_109887.1 53720901 3093232 complement(3908047..3908778) 1 NC_006350.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 3908778 fliA 3093232 fliA Burkholderia pseudomallei K96243 flagellar biosynthesis sigma factor YP_109887.1 3908047 R 272560 CDS YP_109888.1 53720902 3093231 complement(3908803..3909615) 1 NC_006350.1 Similar to Vibrio parahaemolyticus flagellar biosynthesis protein FlhG SWALL:Q9LB16 (EMBL:AF069392) (295 aa) fasta scores: E(): 4.4e-09, 33.33% id in 267 aa; flagellar biosynthesis protein FlhG 3909615 flhG 3093231 flhG Burkholderia pseudomallei K96243 flagellar biosynthesis protein FlhG YP_109888.1 3908803 R 272560 CDS YP_109889.1 53720903 3092159 complement(3909608..3911359) 1 NC_006350.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 3911359 flhF 3092159 flhF Burkholderia pseudomallei K96243 flagellar biosynthesis regulator FlhF YP_109889.1 3909608 R 272560 CDS YP_109890.1 53720904 3091456 complement(3911356..3913458) 1 NC_006350.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 3913458 flhA 3091456 flhA Burkholderia pseudomallei K96243 flagellar biosynthesis protein FlhA YP_109890.1 3911356 R 272560 CDS YP_109891.1 53720905 3091457 complement(3913455..3914672) 1 NC_006350.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 3914672 flhB 3091457 flhB Burkholderia pseudomallei K96243 flagellar biosynthesis protein FlhB YP_109891.1 3913455 R 272560 CDS YP_109892.1 53720906 3094060 complement(3915368..3915868) 1 NC_006350.1 Similar to Streptomyces coelicolor hypothetical protein SCO7282 or SC5H1.10c SWALL:Q9X7R8 (EMBL:AL049863) (160 aa) fasta scores: E(): 1e-31, 54.14% id in 157 aa; hypothetical protein 3915868 3094060 BPSL3296 Burkholderia pseudomallei K96243 hypothetical protein YP_109892.1 3915368 R 272560 CDS YP_109893.1 53720907 3094061 complement(3916055..3917359) 1 NC_006350.1 Gly/Ala/Ser-rich lipoprotein 3917359 3094061 BPSL3297 Burkholderia pseudomallei K96243 Gly/Ala/Ser-rich lipoprotein YP_109893.1 3916055 R 272560 CDS YP_109894.1 53720908 3093670 complement(3917382..3917885) 1 NC_006350.1 hypothetical protein 3917885 3093670 BPSL3298 Burkholderia pseudomallei K96243 hypothetical protein YP_109894.1 3917382 R 272560 CDS YP_109895.1 53720909 3092999 complement(3918083..3918811) 1 NC_006350.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 3918811 cheZ 3092999 cheZ Burkholderia pseudomallei K96243 chemotaxis regulator CheZ YP_109895.1 3918083 R 272560 CDS YP_109896.1 53720910 3092753 complement(3918813..3919241) 1 NC_006350.1 Previously described as Burkholderia pseudomallei CheY SWALL:P94342 (EMBL:U78087) (131 aa) fasta scores: E(): 3.6e-47, 100% id in 131 aa. Similar to Escherichia coli chemotaxis protein CheY or b1882 or z2936 or ecs2592 SWALL:CHEY_ECOLI (SWALL:P06143) (128 aa) fasta scores: E(): 1e-34, 77.59% id in 125 aa; chemotaxis protein CheY 3919241 cheY 3092753 cheY Burkholderia pseudomallei K96243 chemotaxis protein CheY YP_109896.1 3918813 R 272560 CDS YP_109897.1 53720911 3092815 complement(3919557..3920660) 1 NC_006350.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 3920660 cheB 3092815 cheB Burkholderia pseudomallei K96243 chemotaxis-specific methylesterase YP_109897.1 3919557 R 272560 CDS YP_109898.1 53720912 3093671 complement(3920657..3921361) 1 NC_006350.1 catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 3921361 3093671 BPSL3302 Burkholderia pseudomallei K96243 chemoreceptor glutamine deamidase CheD YP_109898.1 3920657 R 272560 CDS YP_109899.1 53720913 3093764 complement(3921358..3922305) 1 NC_006350.1 Similar to Escherichia coli chemotaxis protein methyltransferase CheR or CheX or b1884 SWALL:CHER_ECOLI (SWALL:P07364) (286 aa) fasta scores: E(): 4.9e-60, 57.51% id in 266 aa; chemotaxis protein methyltransferase 3922305 cheR 3093764 cheR Burkholderia pseudomallei K96243 chemotaxis protein methyltransferase YP_109899.1 3921358 R 272560 CDS YP_109900.1 53720914 3092630 complement(3922309..3924330) 1 NC_006350.1 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 9e-44, 42.88% id in 541 aa; methyl-accepting chemotaxis protein I 3924330 tsr 3092630 tsr Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein I YP_109900.1 3922309 R 272560 CDS YP_109901.1 53720915 3092762 complement(3924371..3924898) 1 NC_006350.1 Previously characterised as Burkholderia pseudomallei chemotaxis protein CheW SWALL:O05183 (EMBL:U92493) (175 aa) fasta scores: E(): 2.1e-66, 100% id in 175 aa, and to Escherichia coli chemotaxis protein CheW or b1887 or z2941 or ecs2597 SWALL:CHEW_ECOLI (SWALL:P07365) (167 aa) fasta scores: E(): 9.8e-39, 71.81% id in 149 aa; chemotaxis protein CheW 3924898 cheW 3092762 cheW Burkholderia pseudomallei K96243 chemotaxis protein CheW YP_109901.1 3924371 R 272560 CDS YP_109902.1 53720916 3092814 complement(3924929..3927172) 1 NC_006350.1 Similar to Escherichia coli chemotaxis protein CheA or b1888 SWALL:CHEA_ECOLI (SWALL:P07363) (654 aa) fasta scores: E(): 9.5e-76, 56.14% id in 741 aa; chemotaxis two-component sensor kinase CheA 3927172 cheA 3092814 cheA Burkholderia pseudomallei K96243 chemotaxis two-component sensor kinase CheA YP_109902.1 3924929 R 272560 CDS YP_109903.1 53720917 3092754 complement(3927204..3927584) 1 NC_006350.1 Similar to Rhizobium meliloti chemotaxis regulator CheY or R00638 or Smc03006 SWALL:Q52879 (EMBL:U13166) (121 aa) fasta scores: E(): 7.1e-15, 43.8% id in 121 aa; chemotaxis two-component response regulator CheY1 3927584 cheY1 3092754 cheY1 Burkholderia pseudomallei K96243 chemotaxis two-component response regulator CheY1 YP_109903.1 3927204 R 272560 CDS YP_109904.1 53720918 3092527 complement(3927615..3928637) 1 NC_006350.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 3928637 motB 3092527 motB Burkholderia pseudomallei K96243 flagellar motor protein MotB YP_109904.1 3927615 R 272560 CDS YP_109905.1 53720919 3092331 complement(3928654..3929514) 1 NC_006350.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 3929514 motA 3092331 motA Burkholderia pseudomallei K96243 flagellar motor protein MotA YP_109905.1 3928654 R 272560 CDS YP_109906.1 53720920 3092108 complement(3929708..3930259) 1 NC_006350.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 3930259 flhC 3092108 flhC Burkholderia pseudomallei K96243 transcriptional activator FlhC YP_109906.1 3929708 R 272560 CDS YP_109907.1 53720921 3092109 complement(3930353..3930673) 1 NC_006350.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 3930673 flhD 3092109 flhD Burkholderia pseudomallei K96243 transcriptional activator FlhD YP_109907.1 3930353 R 272560 CDS YP_109908.1 53720922 3092717 3931267..3932331 1 NC_006350.1 Similar to Synechococcus sp. UDP-glucose:tetrahydrobiopterin glucosyltransferase SWALL:Q93EY3 (EMBL:AF331846) (359 aa) fasta scores: E(): 1.6e-18, 31.61% id in 329 aa; glycosyltransferase 3932331 3092717 BPSL3312 Burkholderia pseudomallei K96243 glycosyltransferase YP_109908.1 3931267 D 272560 CDS YP_109909.1 53720923 3092718 complement(3932435..3932731) 1 NC_006350.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein Rsp0335 or Rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 6.6e-15, 53.6% id in 97 aa, and to Escherichia coli Ler Lee-encoded regulator SWALL:Q9AJ33 (EMBL:AF200363) (129 aa) fasta scores: E(): 1.5e-05, 33.66% id in 101 aa, and to Bordetella pertussis Bph3 HNS protein SWALL:O07507 (EMBL:U82566) (123 aa) fasta scores: E(): 0.0053, 36.03% id in 111 aa; HNS-like transcriptional regulator 3932731 3092718 BPSL3313 Burkholderia pseudomallei K96243 HNS-like transcriptional regulator YP_109909.1 3932435 R 272560 CDS YP_109910.1 53720924 3093879 3933037..3933741 1 NC_006350.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 3933741 aqpZ 3093879 aqpZ Burkholderia pseudomallei K96243 aquaporin Z YP_109910.1 3933037 D 272560 CDS YP_109911.1 53720925 3093598 complement(3933930..3934772) 1 NC_006350.1 Similar to Escherichia coli Cof protein or b0446 SWALL:COF_ECOLI (SWALL:P46891) (272 aa) fasta scores: E(): 8.2e-29, 37.16% id in 261 aa; Cof family hydrolase 3934772 3093598 BPSL3315 Burkholderia pseudomallei K96243 Cof family hydrolase YP_109911.1 3933930 R 272560 CDS YP_109912.1 53720926 3093599 complement(3934869..3935759) 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein Mll7250 SWALL:Q986Q7 (EMBL:AP003011) (294 aa) fasta scores: E(): 9.8e-26, 40.13% id in 289 aa; hypothetical protein 3935759 3093599 BPSL3316 Burkholderia pseudomallei K96243 hypothetical protein YP_109912.1 3934869 R 272560 CDS YP_109913.1 53720927 3092286 3935910..3936518 1 NC_006350.1 Similar to Escherichia coli DNA-3-methyladenine glycosylase I Tag or b3549 SWALL:3MG1_ECOLI (SWALL:P05100) (187 aa) fasta scores: E(): 1.3e-32, 49.44% id in 180 aa, and to Ralstonia solanacearum probable DNA-3-methyladenine glycosylase I protein Tag or Rsp0666 or Rs01783 SWALL:Q8XS15 (EMBL:AL646080) (190 aa) fasta scores: E(): 8.3e-43, 64.97% id in 177 aa; DNA-3-methyladenine glycosylase I 3936518 tag 3092286 tag Burkholderia pseudomallei K96243 DNA-3-methyladenine glycosylase I YP_109913.1 3935910 D 272560 CDS YP_109914.1 53720928 3094653 complement(3936905..3937117) 1 NC_006350.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3937117 rpsU 3094653 rpsU Burkholderia pseudomallei K96243 30S ribosomal protein S21 YP_109914.1 3936905 R 272560 CDS YP_109915.1 53720929 3094015 3937675..3938841 1 NC_006350.1 structural flagella protein; Vibrio contains multiple flagellin genes usually localized into two region on the chromosome, flaAC and flaCEDB in V. cholerae, flaFBA and flaCDE in V. parahemolyticus; FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus; flagellin 3938841 fliC 3094015 fliC Burkholderia pseudomallei K96243 flagellin YP_109915.1 3937675 D 272560 CDS YP_109916.1 53720930 3094016 3938991..3940511 1 NC_006350.1 Similar to Escherichia coli flagellar hook-associated protein 2 FliD or FlbC or FlaV or b1924 SWALL:FLID_ECOLI (SWALL:P24216) (467 aa) fasta scores: E(): 1.1e-21, 34.67% id in 496 aa; flagellar hook-associated protein 3940511 fliD 3094016 fliD Burkholderia pseudomallei K96243 flagellar hook-associated protein YP_109916.1 3938991 D 272560 CDS YP_109917.1 53720931 3091872 3940525..3940839 1 NC_006350.1 hypothetical protein 3940839 3091872 BPSL3321 Burkholderia pseudomallei K96243 hypothetical protein YP_109917.1 3940525 D 272560 CDS YP_109918.1 53720932 3091873 3941062..3943392 1 NC_006350.1 Similar to Caulobacter crescentus TPR domain protein cc0119 SWALL:Q9ABV1 (EMBL:AE005686) (747 aa) fasta scores: E(): 2.3e-74, 35.09% id in 738 aa, and to Petunia hybrida spindly protein Spy involved in signal transduction SWALL:O82039 (EMBL:Y17720) (932 aa) fasta scores: E(): 4e-50, 28.86% id in 776 aa; TPR domain-containing protein 3943392 3091873 BPSL3322 Burkholderia pseudomallei K96243 TPR domain-containing protein YP_109918.1 3941062 D 272560 CDS YP_109919.1 53720933 3091807 3943389..3944537 1 NC_006350.1 Similar to Xanthomonas axonopodis nucleotide sugar transaminase VioA or Xac1966 SWALL:AAM36828 (EMBL:AE011831) (369 aa) fasta scores: E(): 7.3e-103, 71.03% id in 366 aa, and to Streptomyces antibioticus dehydratase OleNI SWALL:Q9RR26 (EMBL:AF055579) (393 aa) fasta scores: E(): 6.2e-41, 38.48% id in 369 aa; transferase 3944537 3091807 BPSL3323 Burkholderia pseudomallei K96243 transferase YP_109919.1 3943389 D 272560 CDS YP_109920.1 53720934 3091808 3944534..3945568 1 NC_006350.1 Similar to Streptomyces coelicolor 3-oxoacyl-[acyl-carrier-protein] synthase sco5888 or sc3f7.08 SWALL:O54151 (EMBL:AL021409) (335 aa) fasta scores: E(): 4.2e-29, 34.44% id in 331 aa, and to Cuphea wrightii 3-oxoacyl-[acyl-carrier-protein] synthase III A, chloroplast precursor Kas3A SWALL:FBH1_CUPWR (SWALL:P49244) (400 aa) fasta scores: E(): 3.2e-27, 31.59% id in 326 aa; keto/oxo acyl-ACP synthase 3945568 3091808 BPSL3324 Burkholderia pseudomallei K96243 keto/oxo acyl-ACP synthase YP_109920.1 3944534 D 272560 CDS YP_109921.1 53720935 3092928 3945580..3945801 1 NC_006350.1 Similar to Myxococcus xanthus acyl carrier protein AcpP SWALL:ACP_MYXXA (SWALL:P80921) (78 aa) fasta scores: E(): 0.27, 32.85% id in 70 aa; acyl carrier protein 3945801 3092928 BPSL3325 Burkholderia pseudomallei K96243 acyl carrier protein YP_109921.1 3945580 D 272560 CDS YP_109922.1 53720936 3092929 3945804..3946868 1 NC_006350.1 Similar to Streptomyces coelicolor 3-oxoacyl-[acyl-carrier-protein] synthase SCO5888 or SC3F7.08 SWALL:O54151 (EMBL:AL021409) (335 aa) fasta scores: E(): 2.5e-28, 36.2% id in 337 aa, and to Allium porrum 3-ketoacyl carrier protein synthase III SWALL:O04439 (EMBL:U30600) (402 aa) fasta scores: E(): 3.1e-23, 32.33% id in 334 aa; keto/oxo acyl-ACP synthase 3946868 3092929 BPSL3326 Burkholderia pseudomallei K96243 keto/oxo acyl-ACP synthase YP_109922.1 3945804 D 272560 CDS YP_109923.1 53720937 3093032 3946865..3947629 1 NC_006350.1 Similar to Xanthomonas axonopodis 3-oxoacyl-[ACP] reductase FabG or Xac1963 SWALL:AAM36825 (EMBL:AE011831) (254 aa) fasta scores: E(): 1.2e-26, 44.89% id in 245 aa, and to Azoarcus evansii beta-hydroxyacyl-CoA dehydrogenase SWALL:Q93FC5 (EMBL:AF320253) (269 aa) fasta scores: E(): 1.3e-15, 36.65% id in 251 aa; short chain dehydrogenase 3947629 3093032 BPSL3327 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_109923.1 3946865 D 272560 CDS YP_109924.1 53720938 3093033 3947629..3948261 1 NC_006350.1 Similar to Caulobacter crescentus acetyltransferase LpsB or cc1011 SWALL:O85353 (EMBL:AF062345) (215 aa) fasta scores: E(): 2.4e-15, 34.28% id in 210 aa, and to Escherichia coli WbdR or WbhH or z3192 or ecs2831 SWALL:O85344 (EMBL:AF061251) (221 aa) fasta scores: E(): 1.4e-09, 27.35% id in 212 aa; acetyltransferase 3948261 3093033 BPSL3328 Burkholderia pseudomallei K96243 acetyltransferase YP_109924.1 3947629 D 272560 CDS YP_109925.1 53720939 3091788 3948263..3949327 1 NC_006350.1 Similar to Caulobacter crescentus rieske 2Fe-2S family protein cc3122 SWALL:Q9A3T0 (EMBL:AE005975) (404 aa) fasta scores: E(): 1.9e-11, 25.7% id in 354 aa; Rieske (2Fe-2S) domain-containing protein 3949327 3091788 BPSL3329 Burkholderia pseudomallei K96243 Rieske (2Fe-2S) domain-containing protein YP_109925.1 3948263 D 272560 CDS YP_109926.1 53720940 3091789 complement(3949407..3950144) 1 NC_006350.1 hypothetical protein 3950144 3091789 BPSL3330 Burkholderia pseudomallei K96243 hypothetical protein YP_109926.1 3949407 R 272560 CDS YP_109927.1 53720941 3091768 complement(3950469..3950867) 1 NC_006350.1 outer membrane protein 3950867 3091768 BPSL3331 Burkholderia pseudomallei K96243 outer membrane protein YP_109927.1 3950469 R 272560 CDS YP_109928.1 53720942 3091769 3951436..3952059 1 NC_006350.1 Similar to Ralstonia solanacearum Rsc0231 or Rs00662 SWALL:Q8Y2V1 (EMBL:AL646058) (211 aa) fasta scores: E(): 8e-54, 74.51% id in 208 aa, and to Escherichia coli homoserine/homoserine lactone efflux protein RhtB or b3824 or z5345 or ecs4754 SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 2.7e-13, 31.68% id in 202 aa; amino acid efflux protein 3952059 3091769 BPSL3332 Burkholderia pseudomallei K96243 amino acid efflux protein YP_109928.1 3951436 D 272560 CDS YP_109929.1 53720943 3094515 complement(3952360..3954093) 1 NC_006350.1 Previously described as Burkholderia pseudomallei acid phosphatase AcpA SWALL:Q9L5C5 (EMBL:AF252862) (577 aa) fasta scores: E(): 0, 99.48% id in 577 aa; acid phosphatase 3954093 acpA 3094515 acpA Burkholderia pseudomallei K96243 acid phosphatase YP_109929.1 3952360 R 272560 CDS YP_109930.1 53720944 3093617 complement(3954560..3955246) 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein Rsp0675 or Rs01774 SWALL:Q8XS06 (EMBL:AL646080) (223 aa) fasta scores: E(): 6.9e-51, 63.72% id in 215 aa; lipoprotein 3955246 3093617 BPSL3334 Burkholderia pseudomallei K96243 lipoprotein YP_109930.1 3954560 R 272560 CDS YP_109931.1 53720945 3093618 complement(3955243..3955671) 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein Rsp0674 or Rs01775 SWALL:Q8XS07 (EMBL:AL646080) (125 aa) fasta scores: E(): 4.4e-17, 52.94% id in 119 aa; lipoprotein 3955671 3093618 BPSL3335 Burkholderia pseudomallei K96243 lipoprotein YP_109931.1 3955243 R 272560 CDS YP_109932.1 53720946 3091784 complement(3955731..3956408) 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein Rsp0673 or Rs01776 SWALL:Q8XS08 (EMBL:AL646080) (227 aa) fasta scores: E(): 4.3e-52, 68.32% id in 221 aa; lipoprotein 3956408 3091784 BPSL3336 Burkholderia pseudomallei K96243 lipoprotein YP_109932.1 3955731 R 272560 CDS YP_109933.1 53720947 3091785 3957454..3958275 1 NC_006350.1 Similar to Xanthomonas campestris beta-ketoadipate enol-lactone hydrolase PcaD or Xcc1864 SWALL:AAM41153 (EMBL:AE012288) (271 aa) fasta scores: E(): 4.5e-60, 57.09% id in 268 aa, and to Pseudomonas sp. 3-oxoadipate enol-lactone hydrolase CatD SWALL:Q8VPF0 (EMBL:AY044272) (262 aa) fasta scores: E(): 2.7e-13, 31.5% id in 273 aa; hydrolase 3958275 3091785 BPSL3337 Burkholderia pseudomallei K96243 hydrolase YP_109933.1 3957454 D 272560 CDS YP_109934.1 53720948 3094879 complement(3958328..3960145) 1 NC_006350.1 Similar to Yersinia pestis methyl-accepting chemotaxis protein Tsr2 or ypo1229 SWALL:Q8ZGQ7 (EMBL:AJ414147) (595 aa) fasta scores: E(): 2e-125, 64.33% id in 600 aa, and to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 6.1e-49, 49.18% id in 368 aa; methyl-accepting chemotaxis protein 3960145 3094879 BPSL3338 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_109934.1 3958328 R 272560 CDS YP_109935.1 53720949 3094880 complement(3960414..3962075) 1 NC_006350.1 Similar to Yersinia pestis oxidoreductase Ypo0308 SWALL:Q8ZJ22 (EMBL:AJ414142) (685 aa) fasta scores: E(): 8e-110, 54.69% id in 554 aa, and to Chondrus crispus hexose oxidase SWALL:P93762 (EMBL:U89770) (546 aa) fasta scores: E(): 7e-32, 34.74% id in 567 aa; oxidoreductase 3962075 3094880 BPSL3339 Burkholderia pseudomallei K96243 oxidoreductase YP_109935.1 3960414 R 272560 CDS YP_109936.1 53720950 3093787 complement(3962264..3962965) 1 NC_006350.1 Similar to Serratia marcescens Cbp21 chitin-binding protein SWALL:O83009 (EMBL:AB015998) (197 aa) fasta scores: E(): 0.00011, 35.17% id in 199 aa; chitin-binding protein 3962965 3093787 BPSL3340 Burkholderia pseudomallei K96243 chitin-binding protein YP_109936.1 3962264 R 272560 CDS YP_109937.1 53720951 3093788 complement(3963415..3963732) 1 NC_006350.1 hypothetical protein 3963732 3093788 BPSL3341 Burkholderia pseudomallei K96243 hypothetical protein YP_109937.1 3963415 R 272560 CDS YP_109938.1 53720952 3093410 complement(3964455..3966017) 1 NC_006350.1 Similar to Salmonella typhimurium IbfA protein SWALL:BAB91598 (EMBL:AP005147) (518 aa) fasta scores: E(): 1.1e-14, 25.86% id in 491 aa, and to Bacteriophage lambda EA59 protein SWALL:VE59_LAMBD (SWALL:P03754) (525 aa) fasta scores: E(): 0.67, 24.57% id in 293 aa; bacteriophage protein 3966017 3093410 BPSL3342 Burkholderia pseudomallei K96243 bacteriophage protein YP_109938.1 3964455 R 272560 CDS YP_109939.1 53720953 3093411 complement(3966423..3966782) 1 NC_006350.1 Similar to Yersinia pestis phage protein Ypo2321 SWALL:Q8ZE62 (EMBL:AJ414152) (104 aa) fasta scores: E(): 1.3e-11, 41.48% id in 94 aa, and to Bacteriophage N15 Gp49 protein SWALL:O64357 (EMBL:AF064539) (103 aa) fasta scores: E(): 6.5e-11, 44.82% id in 87 aa; bacteriophage protein 3966782 3093411 BPSL3343 Burkholderia pseudomallei K96243 bacteriophage protein YP_109939.1 3966423 R 272560 CDS YP_109940.1 53720954 3094700 complement(3966797..3967651) 1 NC_006350.1 Similar to Bacteriophage D3 integrase orf35 SWALL:Q9T1P3 (EMBL:AF165214) (369 aa) fasta scores: E(): 2.9e-44, 44.8% id in 279 aa, and to Escherichia coli prophage Dlp12 integrase IntD or Int or b0537 SWALL:INTD_ECOLI (SWALL:P24218) (387 aa) fasta scores: E(): 3.3e-18, 36.64% id in 191 aa; bacteriophage integrase 3967651 3094700 BPSL3344 Burkholderia pseudomallei K96243 bacteriophage integrase YP_109940.1 3966797 R 272560 CDS YP_109941.1 53720955 3094701 complement(3967732..3968511) 1 NC_006350.1 Weakly similar to Brevibacillus borstelensis cryptic plasmid pHT926 Rep protein SWALL:Q52178 (EMBL:D43692) (281 aa) fasta scores: E(): 0.032, 26.04% id in 192 aa; bacteriophage-like protein 3968511 3094701 BPSL3345 Burkholderia pseudomallei K96243 bacteriophage-like protein YP_109941.1 3967732 R 272560 CDS YP_109942.1 53720956 3093754 complement(3968968..3969459) 1 NC_006350.1 No significant database matches. Possible coiled-coil region at residues 41-58.; hypothetical protein 3969459 3093754 BPSL3346 Burkholderia pseudomallei K96243 hypothetical protein YP_109942.1 3968968 R 272560 CDS YP_109943.1 53720957 3093755 complement(3969661..3971037) 1 NC_006350.1 Similar to Yersinia pestis phage-related secreted protein Ypo2280 SWALL:Q8ZEA2 (EMBL:AJ414151) (414 aa) fasta scores: E(): 4.5e-26, 32.17% id in 401 aa, and to Bacteriophage M13 IV protein SWALL:VG4_BPM13 (SWALL:P03665) (426 aa) fasta scores: E(): 1.1e-08, 23.81% id in 252 aa; bacteriophage-related lipoprotein 3971037 3093755 BPSL3347 Burkholderia pseudomallei K96243 bacteriophage-related lipoprotein YP_109943.1 3969661 R 272560 CDS YP_109944.1 53720958 3092508 complement(3971034..3971939) 1 NC_006350.1 Similar to Bacteriophage Pf3 32.7 kDa protein SWALL:VG30_BPPF3 (SWALL:P03626) (301 aa) fasta scores: E(): 9.6e-18, 34.63% id in 257 aa; bacteriophage protein 3971939 3092508 BPSL3348 Burkholderia pseudomallei K96243 bacteriophage protein YP_109944.1 3971034 R 272560 CDS YP_109945.1 53720959 3092509 complement(3972214..3973947) 1 NC_006350.1 No significant database matches. Contains 14 x NPTG repeat at residues 413-468.; hypothetical protein 3973947 3092509 BPSL3349 Burkholderia pseudomallei K96243 hypothetical protein YP_109945.1 3972214 R 272560 CDS YP_109946.1 53720960 3092806 complement(3974011..3974325) 1 NC_006350.1 hypothetical protein 3974325 3092806 BPSL3350 Burkholderia pseudomallei K96243 hypothetical protein YP_109946.1 3974011 R 272560 CDS YP_109947.1 53720961 3092807 complement(3974401..3974607) 1 NC_006350.1 Similar to Xylella fastidiosa hypothetical protein Xf1878 SWALL:Q9PCA3 (EMBL:AE004008) (73 aa) fasta scores: E(): 0.25, 32.25% id in 62 aa, and to Bacteriophage Pf3 major coat protein SWALL:COAT_BPPF3 (SWALL:P03623) (44 aa) fasta scores: E(): 5.9, 32.43% id in 37 aa; bacteriophage coat protein 3974607 3092807 BPSL3351 Burkholderia pseudomallei K96243 bacteriophage coat protein YP_109947.1 3974401 R 272560 CDS YP_109948.1 53720962 3092774 complement(3974691..3974993) 1 NC_006350.1 hypothetical protein 3974993 3092774 BPSL3352 Burkholderia pseudomallei K96243 hypothetical protein YP_109948.1 3974691 R 272560 CDS YP_109949.1 53720963 3094567 3976225..3977124 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein Rsc3084 or Rs00536 SWALL:Q8XUU9 (EMBL:AL646073) (294 aa) fasta scores: E(): 7.1e-50, 57.75% id in 303 aa, and to Neisseria meningitidis cytochrome NMA1936 SWALL:Q9JT84 (EMBL:AL162757) (279 aa) fasta scores: E(): 5.8e-09, 36.67% id in 289 aa, and to Chlorobium limicola f.sp. thiosulfatophilum cytochrome c-555 SWALL:C555_CHLLT (SWALL:P00123) (86 aa) fasta scores: E(): 6.3e-06, 45.23% id in 84 aa; cytochrome 3977124 3094567 BPSL3354 Burkholderia pseudomallei K96243 cytochrome YP_109949.1 3976225 D 272560 CDS YP_109950.1 53720964 3093146 complement(3977437..3979524) 1 NC_006350.1 Similar to Escherichia coli ATP-dependent DNA helicase Rep or b3778 SWALL:REP_ECOLI (SWALL:P09980) (673 aa) fasta scores: E(): 1.6e-75, 47.07% id in 701 aa; ATP-dependent DNA helicase Rep 3979524 rep 3093146 rep Burkholderia pseudomallei K96243 ATP-dependent DNA helicase Rep YP_109950.1 3977437 R 272560 CDS YP_109951.1 53720965 3094568 3979774..3980622 1 NC_006350.1 Similar to Streptomyces coelicolor membrane protein SCO0619 or SCF56.03 SWALL:Q9RD63 (EMBL:AL133424) (247 aa) fasta scores: E(): 0.092, 32.53% id in 249 aa; hypothetical protein 3980622 3094568 BPSL3356 Burkholderia pseudomallei K96243 hypothetical protein YP_109951.1 3979774 D 272560 CDS YP_109952.1 53720966 3093672 3980619..3981422 1 NC_006350.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa3750 SWALL:Q9HXP4 (EMBL:AE004794) (249 aa) fasta scores: E(): 3.9e-18, 40.08% id in 227 aa; hypothetical protein 3981422 3093672 BPSL3357 Burkholderia pseudomallei K96243 hypothetical protein YP_109952.1 3980619 D 272560 CDS YP_109953.1 53720967 3093673 3981885..3982988 1 NC_006350.1 Similar to many predicted oxidoreductases eg. Yersinia pestis oxidoreductase Ypo2259 SWALL:Q8ZEC1 (EMBL:AJ414151) (349 aa) fasta scores: E(): 5.5e-54, 43.93% id in 346 aa; oxidoreductase 3982988 3093673 BPSL3358 Burkholderia pseudomallei K96243 oxidoreductase YP_109953.1 3981885 D 272560 CDS YP_109954.1 53720968 3092991 3983160..3983519 1 NC_006350.1 Similar to Ralstonia solanacearum probable lipoprotein Rsc1586 or Rs03948 SWALL:Q8XZ20 (EMBL:AL646065) (118 aa) fasta scores: E(): 5e-14, 52.54% id in 118 aa; lipoprotein 3983519 3092991 BPSL3359 Burkholderia pseudomallei K96243 lipoprotein YP_109954.1 3983160 D 272560 CDS YP_109955.1 53720969 3092626 3984376..3985494 1 NC_006350.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3985494 gcvT 3092626 gcvT Burkholderia pseudomallei K96243 glycine cleavage system aminomethyltransferase T YP_109955.1 3984376 D 272560 CDS YP_109956.1 53720970 3092123 3985588..3985968 1 NC_006350.1 Similar to Escherichia coli glycine cleavage system H protein GcvH or b2904 or z4241 or ecs3775 or sty3210 SWALL:GCSH_ECOLI (SWALL:P23884) (128 aa) fasta scores: E(): 7.9e-26, 60.8% id in 125 aa; glycine cleavage system H protein 3985968 gcvH 3092123 gcvH Burkholderia pseudomallei K96243 glycine cleavage system H protein YP_109956.1 3985588 D 272560 CDS YP_109957.1 53720971 3092605 3986567..3989494 1 NC_006350.1 decarboxylating; acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3989494 gcvP 3092605 gcvP Burkholderia pseudomallei K96243 glycine dehydrogenase YP_109957.1 3986567 D 272560 CDS YP_109958.1 53720972 3092992 3989646..3990764 1 NC_006350.1 No significant database similarities; hypothetical protein 3990764 3092992 BPSL3363 Burkholderia pseudomallei K96243 hypothetical protein YP_109958.1 3989646 D 272560 CDS YP_109959.1 53720973 3092280 3990798..3992186 1 NC_006350.1 Similar to Escherichia coli L-serine dehydratase 1 SdaA or b1814 SWALL:SDHL_ECOLI (SWALL:P16095) (454 aa) fasta scores: E(): 1.7e-86, 52.7% id in 463 aa; L-serine dehydratase I 3992186 sdaA 3092280 sdaA Burkholderia pseudomallei K96243 L-serine dehydratase I YP_109959.1 3990798 D 272560 CDS YP_109960.1 53720974 3092863 complement(3992221..3993402) 1 NC_006350.1 Weakly similar to Neisseria gonorrhoeae hypothetical 33.4 kDa protein SWALL:Q93NE6 (EMBL:AF374415) (289 aa) fasta scores: E(): 3.4e-07, 31% id in 229 aa; hypothetical protein 3993402 3092863 BPSL3365 Burkholderia pseudomallei K96243 hypothetical protein YP_109960.1 3992221 R 272560 CDS YP_109961.1 53720975 3094327 3993626..3995329 1 NC_006350.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; thiamine pyrophosphate protein 3995329 ilvG 3094327 ilvG Burkholderia pseudomallei K96243 thiamine pyrophosphate protein YP_109961.1 3993626 D 272560 CDS YP_109962.1 53720976 3092864 3995358..3996425 1 NC_006350.1 No significant database similarities; hypothetical protein 3996425 3092864 BPSL3367 Burkholderia pseudomallei K96243 hypothetical protein YP_109962.1 3995358 D 272560 CDS YP_109963.1 53720977 3094237 complement(3996544..3997623) 1 NC_006350.1 Similar to Salmonella typhimurium ethanolamine operon regulatory protein EutR or Stm2454 SWALL:EUTR_SALTY (SWALL:Q9ZFU7) (350 aa) fasta scores: E(): 4.5e-37, 41.08% id in 314 aa; AraC family transcriptional regulator 3997623 3094237 BPSL3368 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_109963.1 3996544 R 272560 CDS YP_109964.1 53720978 3092657 3997868..3999388 1 NC_006350.1 Similar to Alcaligenes eutrophus acetaldehyde dehydrogenase II AcoD SWALL:DHA2_ALCEU (SWALL:P46368) (506 aa) fasta scores: E(): 5.2e-172, 81.02% id in 506 aa; acetaldehyde dehydrogenase 3999388 acoD 3092657 acoD Burkholderia pseudomallei K96243 acetaldehyde dehydrogenase YP_109964.1 3997868 D 272560 CDS YP_109965.1 53720979 3094238 complement(3999653..3999898) 1 NC_006350.1 No significant database similarities; hypothetical protein 3999898 3094238 BPSL3370 Burkholderia pseudomallei K96243 hypothetical protein YP_109965.1 3999653 R 272560 CDS YP_109966.1 53720980 3092872 complement(3999964..4000767) 1 NC_006350.1 catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 4000767 eutC 3092872 eutC Burkholderia pseudomallei K96243 ethanolamine ammonia-lyase small subunit YP_109966.1 3999964 R 272560 CDS YP_109967.1 53720981 3091794 complement(4000764..4002161) 1 NC_006350.1 Similar to Salmonella typhimurium ethanolamine ammonia-lyase heavy chain EutB or Stm2458 SWALL:EUTB_SALTY (SWALL:P19264) (453 aa) fasta scores: E(): 3.2e-85, 52.24% id in 446 aa; ethanolamine ammonia-lyase heavy chain 4002161 eutB 3091794 eutB Burkholderia pseudomallei K96243 ethanolamine ammonia-lyase heavy chain YP_109967.1 4000764 R 272560 CDS YP_109968.1 53720982 3094269 complement(4002218..4003627) 1 NC_006350.1 Lies upstream of a CDS for ethanolamine utilisation. Similar to Xanthomonas campestris ethanolamin permease EutP or Xcc2259 SWALL:AAM41538 (EMBL:AE012333) (454 aa) fasta scores: E(): 3.4e-119, 72.66% id in 428 aa, and to Rhodococcus erythropolis ethanolamine permease EutP SWALL:Q53148 (EMBL:L24492) (488 aa) fasta scores: E(): 1.6e-38, 35.46% id in 454 aa; ethanolamine permease 4003627 3094269 BPSL3373 Burkholderia pseudomallei K96243 ethanolamine permease YP_109968.1 4002218 R 272560 CDS YP_109969.1 53720983 3094270 4004245..4005423 1 NC_006350.1 Similar to Rhizobium loti hypothetical protein Mll4680 SWALL:Q98DJ2 (EMBL:AP003004) (576 aa) fasta scores: E(): 1.4e-06, 28.52% id in 305 aa; hypothetical protein 4005423 3094270 BPSL3374 Burkholderia pseudomallei K96243 hypothetical protein YP_109969.1 4004245 D 272560 CDS YP_109970.1 53720984 3092847 4005463..4005645 1 NC_006350.1 Doubtful CDS. No significant database similarities; hypothetical protein 4005645 3092847 BPSL3375 Burkholderia pseudomallei K96243 hypothetical protein YP_109970.1 4005463 D 272560 CDS YP_109971.1 53720985 3092848 complement(4005796..4007307) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein Rsp1274 or Rs05319 SWALL:Q8XQF3 (EMBL:AL646083) (487 aa) fasta scores: E(): 1e-150, 84.88% id in 483 aa; hypothetical protein 4007307 3092848 BPSL3376 Burkholderia pseudomallei K96243 hypothetical protein YP_109971.1 4005796 R 272560 CDS YP_008992012.1 568335727 18093827 complement(4008182..4008595) 1 NC_006350.1 adenylate cyclase 4008595 18093827 BPSL3377 Burkholderia pseudomallei K96243 adenylate cyclase YP_008992012.1 4008182 R 272560 CDS YP_109972.1 53720986 3094359 complement(4008608..4011118) 1 NC_006350.1 Similar to Pseudomonas putida CadA SWALL:Q93TP6 (EMBL:AF333961) (737 aa) fasta scores: E(): 4e-100, 65.9% id in 745 aa, and to Ralstonia metallidurans Pb-efflux ATPase PbrA SWALL:Q9AKR5 (EMBL:AJ278984) (798 aa) fasta scores: E(): 1.1e-93, 66.94% id in 714 aa, and to Staphylococcus aureus probable cadmium-transporting ATPase CadA SWALL:CADD_STAAU (SWALL:P37386) (804 aa) fasta scores: E(): 2.8e-88, 40.3% id in 722 aa. CDS is extended at the N-terminus in comparison to orthologues; heavy metal resistance membrane ATPase 4011118 3094359 BPSL3378 Burkholderia pseudomallei K96243 heavy metal resistance membrane ATPase YP_109972.1 4008608 R 272560 CDS YP_109973.1 53720987 3094360 4011201..4011632 1 NC_006350.1 Similar to Escherichia coli, and Escherichia coli O157:H7 Zn(ii)-responsive regulator of zntA ZntR SWALL:ZNTR_ECOLI (SWALL:P36676) (141 aa) fasta scores: E(): 3.8e-13, 39.06% id in 128 aa, and to Pseudomonas putida MerR family response regulator of cadmium resistance CadR SWALL:Q93TP7 (EMBL:AF333961) (147 aa) fasta scores: E(): 3e-28, 58.33% id in 144 aa; MerR family regulatory protein 4011632 3094360 BPSL3379 Burkholderia pseudomallei K96243 MerR family regulatory protein YP_109973.1 4011201 D 272560 CDS YP_109974.1 53720988 3091546 4011732..4012373 1 NC_006350.1 Similar to Rhizobium leguminosarum hypothetical 12.6 kDa protein SWALL:Q9XAT0 (EMBL:AJ243305) (106 aa) fasta scores: E(): 3.1e-18, 58.82% id in 102 aa, and to Streptomyces argillaceus mithramycin resistance determinant, ATP-binding protein SWALL:Q53625 (EMBL:U43537) (219 aa) fasta scores: E(): 8.8e-18, 36.81% id in 201 aa; PadR transcriptional regulator 4012373 3091546 BPSL3380 Burkholderia pseudomallei K96243 PadR transcriptional regulator YP_109974.1 4011732 D 272560 CDS YP_109975.1 53720989 3091948 complement(4013381..4014175) 1 NC_006350.1 Similar to Salmonella typhimurium lysine-arginine-ornithine-binding periplasmic protein precursor ArgT or stm2355 SWALL:ARGT_SALTY (SWALL:P02911) (260 aa) fasta scores: E(): 2.2e-40, 46.36% id in 261 aa; amino acid-binding periplasmic transport protein 4014175 3091948 BPSL3383 Burkholderia pseudomallei K96243 amino acid-binding periplasmic transport protein YP_109975.1 4013381 R 272560 CDS YP_109976.1 53720990 3091949 complement(4014229..4015419) 1 NC_006350.1 catalyzes the transfer of an amino moiety; aminotransferase 4015419 3091949 BPSL3384 Burkholderia pseudomallei K96243 aminotransferase YP_109976.1 4014229 R 272560 CDS YP_109977.1 53720991 3092065 complement(4016266..4017015) 1 NC_006350.1 Similar to many eg. Rhizobium meliloti regulatory protein BetI or R00950 or Smc00095 SWALL:BETI_RHIME (SWALL:O69786) (203 aa) fasta scores: E(): 0.012, 29.32% id in 208 aa; TetR family transcriptional regulator 4017015 3092065 BPSL3385 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_109977.1 4016266 R 272560 CDS YP_109978.1 53720992 3092066 4017014..4018654 1 NC_006350.1 Similar to Burkholderia pseudomallei acyl-CoA dehydrogenase AidB SWALL:Q9ANZ8 (EMBL:AF317886) (554 aa) fasta scores: E(): 5.7e-123, 60.94% id in 553 aa, and to Escherichia coli AidB or b4187 SWALL:AIDB_ECOLI (SWALL:P33224) (541 aa) fasta scores: E(): 2.7e-82, 46.48% id in 512 aa; acyl-CoA dehydrogenase 4018654 3092066 BPSL3386 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_109978.1 4017014 D 272560 CDS YP_109979.1 53720993 3093894 4018770..4020317 1 NC_006350.1 Similar to Rhizobium leguminosarum malonyl CoA synthetase MatB SWALL:Q9ZIP5 (EMBL:AF117694) (504 aa) fasta scores: E(): 2e-34, 33.46% id in 505 aa; fatty-acid CoA ligase 4020317 3093894 BPSL3387 Burkholderia pseudomallei K96243 fatty-acid CoA ligase YP_109979.1 4018770 D 272560 CDS YP_109980.1 53720994 3093895 complement(4020565..4021704) 1 NC_006350.1 Similar to Ralstonia solanacearum amino-acid transport signal peptide protein Rsc3300 or Rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 2.9e-92, 71.11% id in 367 aa, and to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC or Pa1074 SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 3.2e-32, 34.85% id in 373 aa; periplasmic amino acid binding transport protein 4021704 3093895 BPSL3388 Burkholderia pseudomallei K96243 periplasmic amino acid binding transport protein YP_109980.1 4020565 R 272560 CDS YP_109981.1 53720995 3092967 complement(4021789..4025718) 1 NC_006350.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 4025718 putA 3092967 putA Burkholderia pseudomallei K96243 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_109981.1 4021789 R 272560 CDS YP_109982.1 53720996 3093511 4026002..4026172 1 NC_006350.1 Possible gene remnant. Similar to an internal region of Rhizobium meliloti ABC transporter permease SMA0081 SWALL:Q931A4 (EMBL:AE007198) (218 aa) fasta scores: E(): 8.4, 34.69% id in 49 aa; hypothetical protein 4026172 3093511 BPSL3389A Burkholderia pseudomallei K96243 hypothetical protein YP_109982.1 4026002 D 272560 CDS YP_109983.1 53720997 3092247 complement(4026183..4028450) 1 NC_006350.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 4028450 priA 3092247 priA Burkholderia pseudomallei K96243 primosome assembly protein PriA YP_109983.1 4026183 R 272560 CDS YP_109984.1 53720998 3092343 complement(4028891..4029985) 1 NC_006350.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 4029985 hemE 3092343 hemE Burkholderia pseudomallei K96243 uroporphyrinogen decarboxylase YP_109984.1 4028891 R 272560 CDS YP_109985.1 53720999 3092973 4030125..4030910 1 NC_006350.1 Similar to Pseudomonas aeruginosa cyclohexadienyl dehydratase precursor [includes: prephenate dehydratase (EC 4.2.1.51); arogenate dehydratase (EC 4.-.-.-)] PheC or Pa3475 SWALL:PHEC_PSEAE (SWALL:Q01269) (268 aa) fasta scores: E(): 3.4e-53, 54.33% id in 254 aa; cyclohexadienyl dehydratase 4030910 pheC 3092973 pheC Burkholderia pseudomallei K96243 cyclohexadienyl dehydratase YP_109985.1 4030125 D 272560 CDS YP_109986.1 53721000 3093512 complement(4031110..4031424) 1 NC_006350.1 Similar to many hypotheticals though shorter in the N-terminus. Similar to Ralstonia solanacearum hypothetical protein Rsc3313 or Rs02543 SWALL:Q8XU80 (EMBL:AL646074) (153 aa) fasta scores: E(): 3.7e-14, 52.47% id in 101 aa, and to Escherichia coli protein YccU or b0965 SWALL:YCCU_ECOLI (SWALL:P75874) (137 aa) fasta scores: E(): 1.8e-11, 46.8% id in 94 aa. Possible gene remnant; hypothetical protein 4031424 3093512 BPSL3393 Burkholderia pseudomallei K96243 hypothetical protein YP_109986.1 4031110 R 272560 CDS YP_109987.1 53721001 3094034 complement(4032011..4033741) 1 NC_006350.1 activates fatty acids by binding to coenzyme A; AMP-binding protein 4033741 3094034 BPSL3394 Burkholderia pseudomallei K96243 AMP-binding protein YP_109987.1 4032011 R 272560 CDS YP_109988.1 53721002 3093523 complement(4033974..4034399) 1 NC_006350.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 4034399 atpC 3093523 atpC Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit epsilon YP_109988.1 4033974 R 272560 CDS YP_109989.1 53721003 3093524 complement(4034643..4036037) 1 NC_006350.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 4036037 atpD 3093524 atpD Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit beta YP_109989.1 4034643 R 272560 CDS YP_109990.1 53721004 3092777 complement(4036117..4036992) 1 NC_006350.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 4036992 atpG 3092777 atpG Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit gamma YP_109990.1 4036117 R 272560 CDS YP_109991.1 53721005 3092610 complement(4037064..4038605) 1 NC_006350.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 4038605 atpA 3092610 atpA Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit alpha YP_109991.1 4037064 R 272560 CDS YP_109992.1 53721006 3092138 complement(4038652..4039191) 1 NC_006350.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 4039191 atpH 3092138 atpH Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit delta YP_109992.1 4038652 R 272560 CDS YP_109993.1 53721007 3092776 complement(4039194..4039634) 1 NC_006350.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 4039634 atpF 3092776 atpF Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit B YP_109993.1 4039194 R 272560 CDS YP_109994.1 53721008 3094555 complement(4039792..4040067) 1 NC_006350.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 4040067 atpE 3094555 atpE Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit C YP_109994.1 4039792 R 272560 CDS YP_109995.1 53721009 3092611 complement(4040138..4041007) 1 NC_006350.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 4041007 atpB 3092611 atpB Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit A YP_109995.1 4040138 R 272560 CDS YP_109996.1 53721010 3094035 complement(4041102..4041632) 1 NC_006350.1 Note possible downstream alternative start codons. Full length similarity to Ralstonia solanacearum hypothetical transmembrane protein Rsc3324 or Rs02554 SWALL:Q8XU69 (EMBL:AL646074) (190 aa) fasta scores: E(): 5.1e-17, 39.34% id in 183 aa. N-terminally truncated version similar to Pseudomonas aeruginosa ATP synthase I AtpI or Pa5561 SWALL:Q9HT13 (EMBL:AE004967) (126 aa) fasta scores: E(): 3.9e-06, 36.2% id in 116 aa.; ATP synthase I AtpI 4041632 3094035 BPSL3403 Burkholderia pseudomallei K96243 ATP synthase I AtpI YP_109996.1 4041102 R 272560 CDS YP_109997.1 53721011 3093928 complement(4041903..4043054) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane protein Rsp0802 or Rs01905 SWALL:Q8XRM9 (EMBL:AL646080) (408 aa) fasta scores: E(): 5.6e-56, 45.69% id in 372 aa; hypothetical protein 4043054 3093928 BPSL3404 Burkholderia pseudomallei K96243 hypothetical protein YP_109997.1 4041903 R 272560 CDS YP_109998.1 53721012 3093929 complement(4043044..4043931) 1 NC_006350.1 Similar to Ralstonia solanacearum chromosome partitioning protein ParB or Rsc3325 or Rs02555 SWALL:Q8XU68 (EMBL:AL646074) (303 aa) fasta scores: E(): 2.3e-72, 73.12% id in 294 aa, and to Caulobacter crescentus chromosome partitioning protein ParB or Cc3752 SWALL:PARB_CAUCR (SWALL:O05190) (294 aa) fasta scores: E(): 3.8e-32, 42.42% id in 297 aa; chromosome partitioning protein ParB 4043931 3093929 BPSL3405 Burkholderia pseudomallei K96243 chromosome partitioning protein ParB YP_109998.1 4043044 R 272560 CDS YP_109999.1 53721013 3092031 complement(4043967..4044761) 1 NC_006350.1 Similar to Ralstonia solanacearum chromosome partitioning protein ParA or rsc3326 or Rs02560 SWALL:Q8XU67 (EMBL:AL646074) (261 aa) fasta scores: E(): 3.2e-75, 79.29% id in 256 aa, and to Caulobacter crescentus chromosome partitioning protein ParA or Cc3753 SWALL:PARA_CAUCR (SWALL:O05189) (267 aa) fasta scores: E(): 1.8e-43, 49.21% id in 254 aa; chromosome partitioning protein ParA 4044761 3092031 BPSL3406 Burkholderia pseudomallei K96243 chromosome partitioning protein ParA YP_109999.1 4043967 R 272560 CDS YP_110000.1 53721014 3093323 complement(4044790..4045482) 1 NC_006350.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 4045482 gidB 3093323 gidB Burkholderia pseudomallei K96243 16S rRNA methyltransferase GidB YP_110000.1 4044790 R 272560 CDS YP_110001.1 53721015 3092627 complement(4045485..4047458) 1 NC_006350.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4047458 gidA 3092627 gidA Burkholderia pseudomallei K96243 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_110001.1 4045485 R 272560 CDS YP_110002.1 53721016 3092032 complement(4047620..4048375) 1 NC_006350.1 Similar to Ralstonia solanacearum probable amino-acid composite ATP-binding transmembrane ABC transporter protein Rsp0707 or Rs01742 SWALL:Q8XRX4 (EMBL:AL646080) (247 aa) fasta scores: E(): 3.2e-59, 78.6% id in 243 aa, and to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or Pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 4.4e-31, 47.05% id in 238 aa; branched-chain amino acid ABC transporter ATP-binding subunit 4048375 3092032 BPSL3409 Burkholderia pseudomallei K96243 branched-chain amino acid ABC transporter ATP-binding subunit YP_110002.1 4047620 R 272560 CDS YP_110003.1 53721017 3094685 complement(4048378..4050162) 1 NC_006350.1 Similar to Ralstonia solanacearum probable amino-acid composite ATP-binding transmembrane ABC transporter protein Rsp0706 or Rs01743 SWALL:Q8XRX5 (EMBL:AL646080) (608 aa) fasta scores: E(): 2.1e-134, 73.89% id in 586 aa; branched-chain amino acid ABC transporter 4050162 3094685 BPSL3410 Burkholderia pseudomallei K96243 branched-chain amino acid ABC transporter YP_110003.1 4048378 R 272560 CDS YP_110004.1 53721018 3094686 complement(4050167..4051222) 1 NC_006350.1 Similar to Ralstonia solanacearum probable amino-acid transmembrane ABC transporter protein rsp0705 or rs01744 SWALL:Q8XRX6 (EMBL:AL646080) (350 aa) fasta scores: E(): 9.9e-85, 68.57% id in 350 aa; branched-chain amino acid ABC transporter permease 4051222 3094686 BPSL3411 Burkholderia pseudomallei K96243 branched-chain amino acid ABC transporter permease YP_110004.1 4050167 R 272560 CDS YP_110005.1 53721019 3093378 complement(4051535..4052692) 1 NC_006350.1 Similar to predicted amino-acid-binding periplasmic proteins eg. Ralstonia solanacearum probable amino-acid-binding periplasmic Rsc3329 or Rs02563 SWALL:Q8XU64 (EMBL:AL646074) (382 aa) fasta scores: E(): 3.5e-93, 67.62% id in 383 aa; branched-chain amino acid ABC transporter periplasmic protein 4052692 3093378 BPSL3412 Burkholderia pseudomallei K96243 branched-chain amino acid ABC transporter periplasmic protein YP_110005.1 4051535 R 272560 CDS YP_110006.1 53721020 3093379 complement(4053013..4054248) 1 NC_006350.1 Weakly similar to Ralstonia solanacearum probable amino-acid-binding periplasmic Rsc3329 or Rs02563 SWALL:Q8XU64 (EMBL:AL646074) (382 aa) fasta scores: E(): 1.4e-06, 27.41% id in 372 aa. Lies within a amino acid transport operon but does not show any other evidence of association with transport; hypothetical protein 4054248 3093379 BPSL3413 Burkholderia pseudomallei K96243 hypothetical protein YP_110006.1 4053013 R 272560 CDS YP_110007.1 53721021 3093112 complement(4054658..4055635) 1 NC_006350.1 Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein Rsc3340 or Rs02575 SWALL:Q8XU53 (EMBL:AL646074) (328 aa) fasta scores: E(): 1.5e-83, 71.6% id in 317 aa; branched-chain amino acid ABC transporter integral membrane subunit 4055635 3093112 BPSL3414 Burkholderia pseudomallei K96243 branched-chain amino acid ABC transporter integral membrane subunit YP_110007.1 4054658 R 272560 CDS YP_110008.1 53721022 3093113 complement(4055632..4056516) 1 NC_006350.1 Similar to many eg. Ralstonia solanacearum probable transmembrane ABC transporter protein Rsc3341 or Rs02576 SWALL:Q8XU52 (EMBL:AL646074) (313 aa) fasta scores: E(): 5e-89, 82.99% id in 294 aa; branched-chain amino acid ABC transporter permease 4056516 3093113 BPSL3415 Burkholderia pseudomallei K96243 branched-chain amino acid ABC transporter permease YP_110008.1 4055632 R 272560 CDS YP_110009.1 53721023 3093118 complement(4056656..4057852) 1 NC_006350.1 Similar to Ralstonia solanacearum substrate-binding periplasmic rsc3342 or rs02578 SWALL:Q8XU51 (EMBL:AL646074) (402 aa) fasta scores: E(): 8.7e-112, 72.56% id in 401 aa, and to Azoarcus evansii substrate binding protein SWALL:Q93FB9 (EMBL:AF320253) (391 aa) fasta scores: E(): 1.8e-19, 28.69% id in 359 aa; branched-chain amino acid ABC transporter periplasmic substrate binding protein 4057852 3093118 BPSL3416 Burkholderia pseudomallei K96243 branched-chain amino acid ABC transporter periplasmic substrate binding protein YP_110009.1 4056656 R 272560 CDS YP_110010.1 53721024 3093119 complement(4057920..4058675) 1 NC_006350.1 Similar to Rhizobium meliloti ATP-binding ABC transporter protein R02974 or Smc03119 SWALL:Q92LQ6 (EMBL:AL591792) (233 aa) fasta scores: E(): 1.4e-49, 60.94% id in 233 aa, and to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG or Pa1070 SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 9.6e-26, 42.35% id in 229 aa; branched-chain amino acid ABC transporter ATP-binding subunit 4058675 3093119 BPSL3417 Burkholderia pseudomallei K96243 branched-chain amino acid ABC transporter ATP-binding subunit YP_110010.1 4057920 R 272560 CDS YP_110011.1 53721025 3094089 complement(4058672..4059451) 1 NC_006350.1 Similar to Ralstonia solanacearum probable amino acid ATP-binding ABC transporter protein Rsc2438 or Rs02664 SWALL:Q8XWN5 (EMBL:AL646070) (257 aa) fasta scores: E(): 1e-25, 37.3% id in 252 aa, and to Salmonella typhimurium high-affinity branched-chain amino acid transport ATP-binding protein LivG or stm3561 or Sty4251 SWALL:LIVG_SALTY (SWALL:P30293) (255 aa) fasta scores: E(): 1.9e-24, 39.23% id in 260 aa; branched-chain amino acid ABC transporter ATP-binding subunit 4059451 3094089 BPSL3418 Burkholderia pseudomallei K96243 branched-chain amino acid ABC transporter ATP-binding subunit YP_110011.1 4058672 R 272560 CDS YP_110012.1 53721026 3094090 complement(4059951..4061636) 1 NC_006350.1 Similar to Ralstonia solanacearum choline dehydrogenase lipoprotein oxidoreductase beta or Rsc3345 or Rs02583 SWALL:Q8XU48 (EMBL:AL646074) (544 aa) fasta scores: E(): 1e-158, 72.81% id in 548 aa, and to Escherichia coli choline dehydrogenase beta or b0311 SWALL:BETA_ECOLI (SWALL:P17444) (556 aa) fasta scores: E(): 1.9e-69, 39.59% id in 538 aa; GMC oxidoreductase 4061636 3094090 BPSL3419 Burkholderia pseudomallei K96243 GMC oxidoreductase YP_110012.1 4059951 R 272560 CDS YP_110013.1 53721027 3091856 complement(4061811..4063337) 1 NC_006350.1 Similar to Streptomyces coelicolor methylmalonic acid semialdehyde dehydrogenase MsdA SWALL:Q53935 (EMBL:L48550) (500 aa) fasta scores: E(): 5.7e-112, 60.28% id in 491 aa; methylmalonic acid semialdehyde dehydrogenase 4063337 msdA 3091856 msdA Burkholderia pseudomallei K96243 methylmalonic acid semialdehyde dehydrogenase YP_110013.1 4061811 R 272560 CDS YP_110014.1 53721028 3094692 4063478..4064377 1 NC_006350.1 Similar to Ralstonia solanacearum probable transcription regulator protein Rsp1450 or Rs03093 SWALL:Q8XQ36 (EMBL:AL646084) (297 aa) fasta scores: E(): 1.6e-35, 41.75% id in 297 aa, and to Escherichia coli xanthosine operon regulatory protein XapR or PndR or b2405 SWALL:XAPR_ECOLI (SWALL:P23841) (294 aa) fasta scores: E(): 1e-16, 29.69% id in 293 aa; LysR family transcriptional regulator 4064377 3094692 BPSL3421 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110014.1 4063478 D 272560 CDS YP_110015.1 53721029 3094693 4064769..4065299 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc1389 or Rs04672 SWALL:Q8XZK6 (EMBL:AL646064) (172 aa) fasta scores: E(): 3.3e-24, 48.23% id in 170 aa; adenylate cyclase 4065299 3094693 BPSL3422 Burkholderia pseudomallei K96243 adenylate cyclase YP_110015.1 4064769 D 272560 CDS YP_110016.1 53721030 3092624 complement(4065400..4065951) 1 NC_006350.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3965 SWALL:Q9HX51 (EMBL:AE004814) (169 aa) fasta scores: E(): 5.8e-18, 41.5% id in 159 aa, and to Klebsiella pneumoniae leucine-responsive regulatory protein Lrp SWALL:LRP_KLEPN (SWALL:P37424) (163 aa) fasta scores: E(): 1.8e-15, 35.57% id in 149 aa; AsnC family transcriptional regulator 4065951 3092624 BPSL3423 Burkholderia pseudomallei K96243 AsnC family transcriptional regulator YP_110016.1 4065400 R 272560 CDS YP_110017.1 53721031 3091566 4066035..4066928 1 NC_006350.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 4066928 phhA 3091566 phhA Burkholderia pseudomallei K96243 phenylalanine 4-monooxygenase YP_110017.1 4066035 D 272560 CDS YP_110018.1 53721032 3092625 4067012..4067317 1 NC_006350.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 4067317 phhB 3092625 phhB Burkholderia pseudomallei K96243 pterin-4-alpha-carbinolamine dehydratase YP_110018.1 4067012 D 272560 CDS YP_110019.1 53721033 3093752 4067752..4068444 1 NC_006350.1 Similar to Rhizobium loti two-component response regulator Mll7953 SWALL:Q984L3 (EMBL:AP003013) (223 aa) fasta scores: E(): 3.7e-35, 50.66% id in 227 aa, and to Salmonella typhimurium transcriptional regulatory protein TctD or Stm2785 SWALL:TCTD_SALTY (SWALL:P22104) (224 aa) fasta scores: E(): 1.1e-29, 42.34% id in 222 aa; two-component response regulator 4068444 3093752 BPSL3426 Burkholderia pseudomallei K96243 two-component response regulator YP_110019.1 4067752 D 272560 CDS YP_110020.1 53721034 3093753 4068551..4070035 1 NC_006350.1 Similar to Xanthomonas axonopodis two-component system sensor protein TctC or xac3482 SWALL:AAM38325 (EMBL:AE011996) (461 aa) fasta scores: E(): 3.6e-26, 32.27% id in 474 aa, and to Escherichia coli O157:H7 sensor protein QseC or z4378 or ecs3908/ecs3909 SWALL:QSEC_ECO57 (SWALL:Q8X524) (449 aa) fasta scores: E(): 4e-18, 29.95% id in 464 aa; two-component sensor kinase 4070035 3093753 BPSL3427 Burkholderia pseudomallei K96243 two-component sensor kinase YP_110020.1 4068551 D 272560 CDS YP_110021.1 53721035 3091595 complement(4070477..4070989) 1 NC_006350.1 Similar to Ralstonia solanacearum hypothetical protein Rsc3358 or Rs02633 SWALL:Q8XU36 (EMBL:AL646074) (179 aa) fasta scores: E(): 1.9e-43, 70.19% id in 151 aa; hypothetical protein 4070989 3091595 BPSL3428 Burkholderia pseudomallei K96243 hypothetical protein YP_110021.1 4070477 R 272560 CDS YP_110022.1 53721036 3091596 complement(4071299..4072411) 1 NC_006350.1 Similar to ful length Ralstonia solanacearum NADH-dependent flavin oxidoreductase Rsc0702 or Rs01607 SWALL:Q8Y1I8 (EMBL:AL646060) (370 aa) fasta scores: E(): 1e-93, 63.78% id in 370 aa, and to C-terminal portion of Azoarcus evansii 2-amninobenzoyl-CoA monooxygenase/reductase SWALL:Q93FB8 (EMBL:AF320254) (773 aa) fasta scores: E(): 6.5e-55, 44.38% id in 356 aa; NADH-dependent flavin oxidoreductase 4072411 3091596 BPSL3429 Burkholderia pseudomallei K96243 NADH-dependent flavin oxidoreductase YP_110022.1 4071299 R 272560 CDS YP_110023.1 53721037 3091795 complement(4072638..4073348) 1 NC_006350.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 4073348 3091795 BPSL3430 Burkholderia pseudomallei K96243 glutamine amidotransferase YP_110023.1 4072638 R 272560 CDS YP_110024.1 53721038 3091796 complement(4073388..4074029) 1 NC_006350.1 Similar to many predicted regulators eg. Pseudomonas aeruginosa probable transcriptional regulator pa0942 SWALL:Q9I516 (EMBL:AE004528) (186 aa) fasta scores: E(): 9.7e-08, 31.86% id in 182 aa; MarR family transcriptional regulator 4074029 3091796 BPSL3431 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_110024.1 4073388 R 272560 CDS YP_110025.1 53721040 3095690 1..1188 1 NC_006351.1 hypothetical protein 1188 3095690 BPSS0001 Burkholderia pseudomallei K96243 hypothetical protein YP_110025.1 1 D 272560 CDS YP_110026.1 53721041 3095691 complement(1282..2325) 1 NC_006351.1 Similar to Ralstonia solanacearum probable integrase/recombinase rsp1102 or rs02608 SWALL:Q8XQW6 (EMBL:AL646082) (323 aa) fasta scores: E(): 4.8e-34, 37.89% id in 314 aa, and to parts of Rhizobium loti integrase/recombinase mll6042 and mll5956 SWALL:Q981F2 (EMBL:AP003008) (332 aa) fasta scores: E(): 3e-06, 29.65% id in 172 aa; integrase 2325 3095691 BPSS0002 Burkholderia pseudomallei K96243 integrase YP_110026.1 1282 R 272560 CDS YP_110027.1 53721042 3095307 complement(2471..2917) 1 NC_006351.1 hypothetical protein 2917 3095307 BPSS0003 Burkholderia pseudomallei K96243 hypothetical protein YP_110027.1 2471 R 272560 CDS YP_110028.1 53721043 3094949 complement(2946..3554) 1 NC_006351.1 Similar to Ralstonia solanacearum transcription regulator protein rsp0962 or rs02293 SWALL:Q8XR97 (EMBL:AL646082) (182 aa) fasta scores: E(): 3.2e-31, 53.33% id in 180 aa, and to Streptomyces coelicolor transcriptional regulatory protein sco1312 or scbac36f5.23C SWALL:Q93IV8 (EMBL:AL592292) (201 aa) fasta scores: E(): 2.2e-11, 30.11% id in 176 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; DNA-binding protein 3554 3094949 BPSS0004 Burkholderia pseudomallei K96243 DNA-binding protein YP_110028.1 2946 R 272560 CDS YP_110029.1 53721044 3095061 3722..4921 1 NC_006351.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase 4921 kbl 3095061 kbl Burkholderia pseudomallei K96243 2-amino-3-ketobutyrate CoA ligase YP_110029.1 3722 D 272560 CDS YP_110030.1 53721045 3096816 4934..5965 1 NC_006351.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 5965 tdh 3096816 tdh Burkholderia pseudomallei K96243 L-threonine 3-dehydrogenase YP_110030.1 4934 D 272560 CDS YP_110031.1 53721046 3094950 complement(6300..6953) 1 NC_006351.1 Similar to Caulobacter crescentus hypothetical protein cc3392 SWALL:Q9A314 (EMBL:AE005999) (213 aa) fasta scores: E(): 9.6e-20, 36.76% id in 204 aa, and to Xylella fastidiosa hypothetical protein xf1840 SWALL:Q9PCE1 (EMBL:AE004005) (237 aa) fasta scores: E(): 3e-19, 33.99% id in 203 aa; hypothetical protein 6953 3094950 BPSS0007 Burkholderia pseudomallei K96243 hypothetical protein YP_110031.1 6300 R 272560 CDS YP_110032.1 53721047 3097084 7043..7660 1 NC_006351.1 Similar to Anabaena sp. transcriptional regulator all7523 SWALL:Q8ZSI7 (EMBL:AP003602) (190 aa) fasta scores: E(): 1.8e-19, 35.26% id in 190 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3034 SWALL:Q9HZH4 (EMBL:AE004728) (185 aa) fasta scores: E(): 5.7e-19, 41.53% id in 183 aa; TetR family transcriptional regulator 7660 3097084 BPSS0008 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_110032.1 7043 D 272560 CDS YP_110033.1 53721048 3095092 7761..8240 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein atu5387 or agr_pat_559 SWALL:Q8UJT8 (EMBL:AE008960) (154 aa) fasta scores: E(): 9.4e-52, 76.31% id in 152 aa, and to Pseudomonas aeruginosa hypothetical protein pa5395 SWALL:Q9HTG9 (EMBL:AE004952) (156 aa) fasta scores: E(): 6.3e-51, 74.19% id in 155 aa; hypothetical protein 8240 3095092 BPSS0009 Burkholderia pseudomallei K96243 hypothetical protein YP_110033.1 7761 D 272560 CDS YP_110034.1 53721049 3095093 complement(8455..9471) 1 NC_006351.1 hypothetical protein 9471 3095093 BPSS0010 Burkholderia pseudomallei K96243 hypothetical protein YP_110034.1 8455 R 272560 CDS YP_110035.1 53721050 3096144 complement(9774..10859) 1 NC_006351.1 Similar to Escherichia coli probable tartrate dehydrogenase YeaU or b1800 SWALL:TTUC_ECOLI (SWALL:P76251) (361 aa) fasta scores: E(): 2.2e-106, 70.95% id in 358 aa, and to Ralstonia solanacearum probable tartrate dehydrogenase oxidoreductase TtuC or rsp1612 or rs02169 SWALL:Q8XPM6 (EMBL:AL646086) (361 aa) fasta scores: E(): 5.3e-113, 75% id in 360 aa; tartrate dehydrogenase 10859 3096144 BPSS0011 Burkholderia pseudomallei K96243 tartrate dehydrogenase YP_110035.1 9774 R 272560 CDS YP_110036.1 53721051 3096145 11028..11945 1 NC_006351.1 Similar to Escherichia coli hypothetical transcriptional regulator YeaT or b1799 SWALL:YEAT_ECOLI (SWALL:P76250) (307 aa) fasta scores: E(): 3.4e-70, 60.13% id in 296 aa, and to Yersinia pestis llysr-family transcriptional regulatory protein ypo2497 SWALL:Q8ZDQ9 (EMBL:AJ414152) (313 aa) fasta scores: E(): 3.7e-67, 56.31% id in 309 aa; LysR family regulatory protein 11945 3096145 BPSS0012 Burkholderia pseudomallei K96243 LysR family regulatory protein YP_110036.1 11028 D 272560 CDS YP_110037.1 53721052 3095048 12536..13213 1 NC_006351.1 Similar to Methanosarcina acetivorans hypothetical protein ma2467 SWALL:Q8TN26 (EMBL:AE010940) (237 aa) fasta scores: E(): 2.4e-28, 35.37% id in 229 aa, and to Rhizobium loti hypothetical protein mll0909 SWALL:Q98LR8 (EMBL:AP002996) (244 aa) fasta scores: E(): 9.6e-21, 31.6% id in 212 aa; hypothetical protein 13213 3095048 BPSS0013 Burkholderia pseudomallei K96243 hypothetical protein YP_110037.1 12536 D 272560 CDS YP_110038.1 53721053 3096935 13448..14071 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O6 hypothetical GST-like protein YliJ or b0838 or c0923 SWALL:YLIJ_ECOLI (SWALL:P75805) (208 aa) fasta scores: E(): 8.4e-22, 38.38% id in 198 aa, and to Xanthomonas axonopodis glutathione S-transferase xac4352 SWALL:AAM39182 (EMBL:AE012089) (206 aa) fasta scores: E(): 4.8e-42, 57.07% id in 198 aa; glutathione S-transferase like protein 14071 3096935 BPSS0014 Burkholderia pseudomallei K96243 glutathione S-transferase like protein YP_110038.1 13448 D 272560 CDS YP_110039.1 53721054 3096936 complement(14506..14970) 1 NC_006351.1 hypothetical protein 14970 3096936 BPSS0015 Burkholderia pseudomallei K96243 hypothetical protein YP_110039.1 14506 R 272560 CDS YP_110040.1 53721055 3096001 complement(15050..16222) 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane protein rsp1060 or rs02397 SWALL:Q8XR08 (EMBL:AL646082) (377 aa) fasta scores: E(): 2.7e-87, 62.29% id in 366 aa, and to Rhizobium loti hypothetical protein mlr2398 SWALL:Q98IH7 (EMBL:AP002999) (390 aa) fasta scores: E(): 3.1e-65, 49.2% id in 378 aa; phospholipase 16222 3096001 BPSS0016 Burkholderia pseudomallei K96243 phospholipase YP_110040.1 15050 R 272560 CDS YP_110041.1 53721056 3097141 complement(16285..17070) 1 NC_006351.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 17070 3097141 BPSS0017 Burkholderia pseudomallei K96243 3-hydroxybutyrate dehydrogenase YP_110041.1 16285 R 272560 CDS YP_110042.1 53721057 3096265 complement(17117..17857) 1 NC_006351.1 converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase 17857 adc 3096265 adc Burkholderia pseudomallei K96243 acetoacetate decarboxylase YP_110042.1 17117 R 272560 CDS YP_110043.1 53721058 3097142 18316..18912 1 NC_006351.1 Similar to Escherichia coli hypothetical protein YbjG or b0841 SWALL:YBJG_ECOLI (SWALL:P75806) (198 aa) fasta scores: E(): 2.2e-18, 35.71% id in 196 aa, and to Ralstonia solanacearum transport transmembrane protein rsc3142 or rs00461 SWALL:Q8XUP4 (EMBL:AL646073) (199 aa) fasta scores: E(): 2.3e-20, 38.29% id in 188 aa; transport-related membrane protein 18912 3097142 BPSS0019 Burkholderia pseudomallei K96243 transport-related membrane protein YP_110043.1 18316 D 272560 CDS YP_110044.1 53721059 3097005 complement(18935..19228) 1 NC_006351.1 hypothetical protein 19228 3097005 BPSS0020 Burkholderia pseudomallei K96243 hypothetical protein YP_110044.1 18935 R 272560 CDS YP_110045.1 53721060 3095971 complement(19937..20764) 1 NC_006351.1 Similar to Stigmatella aurantiaca iron utilization protein MxcB SWALL:Q9F641 (EMBL:AF299336) (270 aa) fasta scores: E(): 1.4e-50, 50.18% id in 271 aa, and to Vibrio cholerae vibriobactin utilization protein ViuB or vc2210 SWALL:VIUB_VIBCH (SWALL:Q56646) (271 aa) fasta scores: E(): 5.4e-20, 33.85% id in 257 aa; iron transport/utilisation-like protein 20764 3095971 BPSS0021 Burkholderia pseudomallei K96243 iron transport/utilisation-like protein YP_110045.1 19937 R 272560 CDS YP_110046.1 53721061 3095972 complement(20804..21508) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp0258 or rs03708 SWALL:Q8XT57 (EMBL:AL646077) (218 aa) fasta scores: E(): 1.8e-24, 46.39% id in 222 aa; PadR-like family regulatory protein 21508 3095972 BPSS0022 Burkholderia pseudomallei K96243 PadR-like family regulatory protein YP_110046.1 20804 R 272560 CDS YP_110047.1 53721062 3096410 21911..23317 1 NC_006351.1 Similar to Polyangium cellulosum cytochrome-P450-monooxygenase SpiL SWALL:CAD43453 (EMBL:AJ505006) (456 aa) fasta scores: E(): 1.1e-16, 25.6% id in 457 aa, and to Mycobacterium tuberculosis cytochrome P450 137 Cyp137 or rv3685c or mt3787 or mtv025.033C SWALL:C137_MYCTU (SWALL:O69653) (476 aa) fasta scores: E(): 1.8e-16, 25.27% id in 451 aa; cytochrome monooxygenase-like protein 23317 3096410 BPSS0023 Burkholderia pseudomallei K96243 cytochrome monooxygenase-like protein YP_110047.1 21911 D 272560 CDS YP_110048.1 53721063 3097099 23467..23667 1 NC_006351.1 hypothetical protein 23667 3097099 BPSS0024 Burkholderia pseudomallei K96243 hypothetical protein YP_110048.1 23467 D 272560 CDS YP_110049.1 53721064 3097100 23841..24692 1 NC_006351.1 Weakly similar to Pseudomonas aeruginosa hypothetical protein pa3283 SWALL:Q9HYW0 (EMBL:AE004750) (284 aa) fasta scores: E(): 4.9e-12, 33.33% id in 258 aa, and to Rhizobium meliloti hypothetical protein rb0508 or smb20529 SWALL:Q92W37 (EMBL:AL603643) (309 aa) fasta scores: E(): 5.6e-08, 24.68% id in 239 aa; hypothetical protein 24692 3097100 BPSS0025 Burkholderia pseudomallei K96243 hypothetical protein YP_110049.1 23841 D 272560 CDS YP_110050.1 53721065 3097114 24689..25522 1 NC_006351.1 hypothetical protein 25522 3097114 BPSS0026 Burkholderia pseudomallei K96243 hypothetical protein YP_110050.1 24689 D 272560 CDS YP_110051.1 53721066 3096917 25519..27462 1 NC_006351.1 N-terminus is similar to the N-terminal region of Pyrococcus horikoshii hypothetical methyltransferase ph0819 SWALL:Y819_PYRHO (SWALL:O58549) (459 aa) fasta scores: E(): 3.2e-28, 30.07% id in 399 aa, and to the full length Methanopyrus kandleri predicted Fe-S oxidoreductase mk0992 SWALL:Q8TWP0 (EMBL:AE010388) (483 aa) fasta scores: E(): 2.5e-25, 26.53% id in 505 aa; hypothetical protein 27462 3096917 BPSS0027 Burkholderia pseudomallei K96243 hypothetical protein YP_110051.1 25519 D 272560 CDS YP_110052.1 53721067 3096918 27476..28465 1 NC_006351.1 Low similarity to Streptomyces lincolnensis LmbW protein SWALL:Q54376 (EMBL:X79146) (318 aa) fasta scores: E(): 7.2e-08, 25.91% id in 328 aa; hypothetical protein 28465 3096918 BPSS0028 Burkholderia pseudomallei K96243 hypothetical protein YP_110052.1 27476 D 272560 CDS YP_110053.1 53721068 3097043 complement(28637..29257) 1 NC_006351.1 Similar to Brucella melitensis transporter LysE family bmei1274 SWALL:Q8YG87 (EMBL:AE009566) (204 aa) fasta scores: E(): 1.5e-30, 49.74% id in 197 aa, and to Ralstonia solanacearum probable transmembrane protein rsc0385 or rs03353 SWALL:Q8Y2F1 (EMBL:AL646059) (212 aa) fasta scores: E(): 7.8e-28, 47.71% id in 197 aa; transport-related membrane protein 29257 3097043 BPSS0029 Burkholderia pseudomallei K96243 transport-related membrane protein YP_110053.1 28637 R 272560 CDS YP_110054.1 53721069 3097061 29365..30258 1 NC_006351.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 30258 3097061 BPSS0030 Burkholderia pseudomallei K96243 chromosome replication initiation inhibitor protein YP_110054.1 29365 D 272560 CDS YP_110055.1 53721070 3097062 complement(30314..31069) 1 NC_006351.1 Similar to Neisseria meningitidis anaerobic transcriptional regulatory protein nma2107 or nmb0380 SWALL:Q9JQQ8 (EMBL:AL162758) (244 aa) fasta scores: E(): 3.8e-40, 45.1% id in 235 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 fumarate and nitrate reduction regulatory protein Fnr or NirR or b1334 or c1807 or z2433 or ecs1915 SWALL:FNR_ECOLI (SWALL:P03019) (250 aa) fasta scores: E(): 1.9e-35, 42.47% id in 226 aa; anaerobic growth regulatory protein 31069 3097062 BPSS0031 Burkholderia pseudomallei K96243 anaerobic growth regulatory protein YP_110055.1 30314 R 272560 CDS YP_110056.1 53721071 3097166 complement(31219..31686) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc0179 or rs00610 SWALL:Q8Y302 (EMBL:AL646057) (151 aa) fasta scores: E(): 6.2e-16, 40.69% id in 145 aa, and to Methanosarcina acetivorans universal stress protein ma3284 SWALL:Q8TKW0 (EMBL:AE011032) (152 aa) fasta scores: E(): 7.3e-11, 37.16% id in 148 aa; universal stress-related protein 31686 3097166 BPSS0032 Burkholderia pseudomallei K96243 universal stress-related protein YP_110056.1 31219 R 272560 CDS YP_110057.1 53721072 3097030 32074..32340 1 NC_006351.1 hypothetical protein 32340 3097030 BPSS0033 Burkholderia pseudomallei K96243 hypothetical protein YP_110057.1 32074 D 272560 CDS YP_110058.1 53721073 3097031 33115..34695 1 NC_006351.1 Similar to Xanthomonas campestris ketoglutarate semialdehyde dehydrogenase xcc3244 SWALL:AAM42514 (EMBL:AE012441) (526 aa) fasta scores: E(): 4e-114, 62.14% id in 523 aa, and to Vibrio harveyi fatty aldehyde dehydrogenase AldH SWALL:DHAF_VIBHA (SWALL:Q56694) (510 aa) fasta scores: E(): 6.1e-82, 48.58% id in 494 aa. Note: Also similar to BPSS0329 (531 aa) fasta scores: E(): 7.2e-91, 60.803% identity in 523 aa overlap; fatty aldehyde dehydrogenase 34695 3097031 BPSS0034 Burkholderia pseudomallei K96243 fatty aldehyde dehydrogenase YP_110058.1 33115 D 272560 CDS YP_110059.1 53721074 3097174 34692..35642 1 NC_006351.1 Similar to Zymomonas mobilis gluconolactonase precursor Gnl SWALL:GNL_ZYMMO (SWALL:Q01578) (320 aa) fasta scores: E(): 1.4e-14, 33.45% id in 278 aa, and to Ralstonia solanacearum gluconolactonase precursor rsp0824 or rs05371 SWALL:Q8XRK7 (EMBL:AL646081) (353 aa) fasta scores: E(): 2.8e-69, 59.2% id in 326 aa; gluconolactonase 35642 3097174 BPSS0035 Burkholderia pseudomallei K96243 gluconolactonase YP_110059.1 34692 D 272560 CDS YP_110060.1 53721075 3095159 complement(36388..36804) 1 NC_006351.1 hypothetical protein 36804 3095159 BPSS0036 Burkholderia pseudomallei K96243 hypothetical protein YP_110060.1 36388 R 272560 CDS YP_110061.1 53721076 3095160 37059..37307 1 NC_006351.1 hypothetical protein 37307 3095160 BPSS0037 Burkholderia pseudomallei K96243 hypothetical protein YP_110061.1 37059 D 272560 CDS YP_110062.1 53721077 3097016 37431..38354 1 NC_006351.1 Similar to the plasmid borne Synechococcus sp. serine acetyltransferase, plasmid SrpH SWALL:SRPH_SYNP7 (SWALL:Q59967) (319 aa) fasta scores: E(): 1.3e-62, 59.19% id in 299 aa, and to Pseudomonas putida serine O-acetyltransferase, pp0228 SWALL:AAN65860 (EMBL:AE016774) (174 aa) fasta scores: E(): 9.3e-46, 74.26% id in 171 aa; serine acetyltransferase 38354 3097016 BPSS0038 Burkholderia pseudomallei K96243 serine acetyltransferase YP_110062.1 37431 D 272560 CDS YP_110063.1 53721078 3096399 complement(38606..39409) 1 NC_006351.1 Similar to Synechocystis sp. 3-oxoacyl-[acyl-carrier protein] reductase 1 slr0886 SWALL:FAG1_SYNY3 (SWALL:P73574) (247 aa) fasta scores: E(): 2.5e-17, 37.55% id in 245 aa, and to Ralstonia solanacearum oxidoreductase rsc0156 or rs01026 SWALL:Q8Y325 (EMBL:AL646057) (267 aa) fasta scores: E(): 5.9e-28, 41.66% id in 264 aa; dehydrogenase 39409 3096399 BPSS0039 Burkholderia pseudomallei K96243 dehydrogenase YP_110063.1 38606 R 272560 CDS YP_110064.1 53721079 3095266 complement(39410..39964) 1 NC_006351.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 39964 folE 3095266 folE Burkholderia pseudomallei K96243 GTP cyclohydrolase I YP_110064.1 39410 R 272560 CDS YP_110065.1 53721080 3096400 complement(40276..41202) 1 NC_006351.1 Similar to the plasmid borne Pseudomonas putida transcriptional activator protein NahR SWALL:NAHR_PSEPU (SWALL:P10183) (300 aa) fasta scores: E(): 4.8e-43, 42.28% id in 298 aa, and to Rhizobium tropici nodulation protein D1 NodD1 SWALL:NOD1_RHITR (SWALL:Q02876) (308 aa) fasta scores: E(): 1.3e-26, 35.01% id in 297 aa; LysR family transcriptional regulator 41202 3096400 BPSS0041 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110065.1 40276 R 272560 CDS YP_110066.1 53721081 3095552 41316..42539 1 NC_006351.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 42539 pobA 3095552 pobA Burkholderia pseudomallei K96243 4-hydroxybenzoate 3-monooxygenase YP_110066.1 41316 D 272560 CDS YP_110067.1 53721082 3095334 42747..43460 1 NC_006351.1 Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit A PcaI SWALL:PCAI_PSEPU (SWALL:Q01103) (231 aa) fasta scores: E(): 3.5e-63, 75.33% id in 223 aa, and to Ralstonia solanacearum probable 3-oxoadipate coa-transferase subunit A protein rsc2254 or rs01305 SWALL:Q8XX62 (EMBL:AL646069) (229 aa) fasta scores: E(): 2.6e-67, 80.34% id in 229 aa; 3-oxoadipate CoA-transferase subunit A 43460 pcaI 3095334 pcaI Burkholderia pseudomallei K96243 3-oxoadipate CoA-transferase subunit A YP_110067.1 42747 D 272560 CDS YP_110068.1 53721083 3095265 43479..44135 1 NC_006351.1 Similar to Pseudomonas putida 3-oxoadipate CoA-transferase subunit B PcaJ SWALL:PCAJ_PSEPU (SWALL:Q01104) (212 aa) fasta scores: E(): 9.6e-62, 76.55% id in 209 aa, and to Ralstonia solanacearum probable 3-oxoadipate coa-transferase subunit B protein rsc2253 or rs01306 SWALL:Q8XX63 (EMBL:AL646069) (220 aa) fasta scores: E(): 2.7e-62, 77.98% id in 209 aa; 3-oxoadipate CoA-transferase subunit B 44135 pcaJ 3095265 pcaJ Burkholderia pseudomallei K96243 3-oxoadipate CoA-transferase subunit B YP_110068.1 43479 D 272560 CDS YP_110069.1 53721084 3095228 44232..45629 1 NC_006351.1 Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase 45629 pcaB 3095228 pcaB Burkholderia pseudomallei K96243 3-carboxy-cis,cis-muconate cycloisomerase YP_110069.1 44232 D 272560 CDS YP_110070.1 53721085 3097143 45642..46427 1 NC_006351.1 Similar to Alcaligenes eutrophus 3-oxoadipate enol-lactone hydrolase CatD1 SWALL:Q9EV40 (EMBL:AF042281) (260 aa) fasta scores: E(): 3.8e-44, 47.69% id in 260 aa, and to Ralstonia solanacearum probable b-ketoadipate enol-lactone hydrolase transmembrane protein rsc2250 or rs01309 SWALL:Q8XX66 (EMBL:AL646069) (270 aa) fasta scores: E(): 5.3e-44, 45% id in 260 aa; lactone hydrolase 46427 3097143 BPSS0046 Burkholderia pseudomallei K96243 lactone hydrolase YP_110070.1 45642 D 272560 CDS YP_110071.1 53721086 3095278 46443..46829 1 NC_006351.1 Similar to Acinetobacter calcoaceticus 4-carboxymuconolactone decarboxylase PcaC SWALL:DC4C_ACICA (SWALL:P20370) (134 aa) fasta scores: E(): 8.8e-29, 57.02% id in 121 aa, and to Ralstonia solanacearum 4-carboxymuconolactone decarboxylase rsc2249 or rs01310 SWALL:Q8XX67 (EMBL:AL646069) (131 aa) fasta scores: E(): 9e-38, 76.98% id in 126 aa; 4-carboxymuconolactone decarboxylase 46829 pcaC 3095278 pcaC Burkholderia pseudomallei K96243 4-carboxymuconolactone decarboxylase YP_110071.1 46443 D 272560 CDS YP_110072.1 53721087 3095372 47008..48363 1 NC_006351.1 Similar to Pseudomonas putida 4-hydroxybenzoate transporter PcaK SWALL:PCAK_PSEPU (SWALL:Q51955) (448 aa) fasta scores: E(): 1.3e-87, 52.08% id in 432 aa, and to Acinetobacter calcoaceticus 4-hydroxybenzoate transporter PcaK SWALL:PCAK_ACICA (SWALL:Q43975) (457 aa) fasta scores: E(): 8.2e-79, 49.32% id in 442 aa; 4-hydroxybenzoate transporter 48363 pcaK 3095372 pcaK Burkholderia pseudomallei K96243 4-hydroxybenzoate transporter YP_110072.1 47008 D 272560 CDS YP_110073.1 53721088 3095340 complement(48431..48679) 1 NC_006351.1 hypothetical protein 48679 3095340 BPSS0049 Burkholderia pseudomallei K96243 hypothetical protein YP_110073.1 48431 R 272560 CDS YP_110074.1 53721089 3095341 complement(48780..49397) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2306 SWALL:Q9I1G9 (EMBL:AE004657) (205 aa) fasta scores: E(): 1.3e-40, 53.26% id in 199 aa, and to Rhizobium meliloti hypothetical transmembrane protein r02108 or smc01425 SWALL:Q92NS0 (EMBL:AL591789) (197 aa) fasta scores: E(): 5.7e-38, 52.76% id in 199 aa; hypothetical protein 49397 3095341 BPSS0050 Burkholderia pseudomallei K96243 hypothetical protein YP_110074.1 48780 R 272560 CDS YP_110075.1 53721090 3095418 complement(49592..50848) 1 NC_006351.1 Similar to Rhizobium meliloti transport transmembrane protein r00752 or smc00807 SWALL:Q92RU2 (EMBL:AL591784) (400 aa) fasta scores: E(): 5.7e-69, 56.18% id in 388 aa, and to Thermoplasma acidophilum sugar transporter related protein ta1377 SWALL:Q9HIG2 (EMBL:AL445067) (381 aa) fasta scores: E(): 3.9e-20, 29.24% id in 383 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 50848 3095418 BPSS0051 Burkholderia pseudomallei K96243 hypothetical protein YP_110075.1 49592 R 272560 CDS YP_110076.1 53721091 3097155 complement(50835..51263) 1 NC_006351.1 Similar to the Ralstonia solanacearum hypothetical protein rsp0556 or rs03923 SWALL:Q8XSC2 (EMBL:AL646079) (182 aa) fasta scores: E(): 2.2e-39, 72.66% id in 139 aa, and to the C-terminal region of Bradyrhizobium japonicum superoxide dismutase SodM-like protein SWALL:Q9RH60 (EMBL:AF065159) (276 aa) fasta scores: E(): 3.9e-31, 54.9% id in 153 aa. CDS is truncated at the C-terminus in comparison to both proteins; hypothetical protein 51263 3097155 BPSS0052 Burkholderia pseudomallei K96243 hypothetical protein YP_110076.1 50835 R 272560 CDS YP_110077.1 53721092 3096659 complement(51665..52855) 1 NC_006351.1 Highly similar to the plasmid borne Alcaligenes eutrophus chromate transport protein ChrA SWALL:CHRA_ALCEU (SWALL:P17551) (401 aa) fasta scores: E(): 5.6e-109, 75.19% id in 387 aa, and to Ralstonia solanacearum probable chromate transport transmembrane protein rsp0555 or rs03924 SWALL:Q8XSC3 (EMBL:AL646079) (401 aa) fasta scores: E(): 4.1e-110, 74.74% id in 396 aa; chromate resistance transport protein 52855 chrA 3096659 chrA Burkholderia pseudomallei K96243 chromate resistance transport protein YP_110077.1 51665 R 272560 CDS YP_110078.1 53721093 3096597 complement(52852..53847) 1 NC_006351.1 Similar to Alcaligenes eutrophus protein ChrB SWALL:CHRB_ALCEU (SWALL:P17552) (324 aa) fasta scores: E(): 1.2e-64, 54.66% id in 311 aa, and to Ralstonia solanacearum probable chromate resistance signal peptide protein rsp0554 or rs03925 SWALL:Q8XSC4 (EMBL:AL646079) (323 aa) fasta scores: E(): 9.1e-67, 56.01% id in 316 aa; chromate resistance exported protein 53847 chrB 3096597 chrB Burkholderia pseudomallei K96243 chromate resistance exported protein YP_110078.1 52852 R 272560 CDS YP_110079.1 53721094 3097156 54765..55313 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll8139 SWALL:Q983W7 (EMBL:AP003013) (174 aa) fasta scores: E(): 1.9e-19, 46.28% id in 175 aa, and to Pseudomonas aeruginosa hypothetical protein pa2134 SWALL:Q9I1Y1 (EMBL:AE004641) (190 aa) fasta scores: E(): 8.6e-09, 34.52% id in 168 aa; hypothetical protein 55313 3097156 BPSS0055 Burkholderia pseudomallei K96243 hypothetical protein YP_110079.1 54765 D 272560 CDS YP_110080.1 53721095 3096093 55366..55668 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr4661 SWALL:Q98DK6 (EMBL:AP003004) (100 aa) fasta scores: E(): 5.8e-07, 37.89% id in 95 aa, and to Methanosarcina mazei copper-binding protein mm2343 SWALL:AAM32039 (EMBL:AE013477) (103 aa) fasta scores: E(): 7e-07, 35.41% id in 96 aa; hypothetical protein 55668 3096093 BPSS0056 Burkholderia pseudomallei K96243 hypothetical protein YP_110080.1 55366 D 272560 CDS YP_110081.1 53721096 3095445 55704..56372 1 NC_006351.1 member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 56372 3095445 BPSS0057 Burkholderia pseudomallei K96243 RNA polymerase sigma factor YP_110081.1 55704 D 272560 CDS YP_110082.1 53721097 3096641 56852..62767 1 NC_006351.1 N-terminal region similar to Micrococcus luteus excinuclease ABC subunit A uvrA SWALL:UVRA_MICLU (SWALL:P13567) (992 aa) fasta scores: E(): 2.4e-33, 41.63% id in 1052 aa, and C-terminal region similar to Mycobacterium tuberculosis excinuclease ABC subunit A rv1638 or mt1675 or mtcy06h11.02 SWALL:UVRA_MYCTU (SWALL:P94972) (972 aa) fasta scores: E(): 2.8e-31, 41.73% id in 1016 aa. Note: This CDS seems to have duplicated itself forming a whole CDS which N-terminal region is highly similar to its C-terminal region; excinuclease ABC subunit A 62767 uvrA 3096641 uvrA Burkholderia pseudomallei K96243 excinuclease ABC subunit A YP_110082.1 56852 D 272560 CDS YP_110083.1 53721098 3095446 complement(63800..64060) 1 NC_006351.1 Similar to Enterobacter aerogenes KluA SWALL:Q93KC6 (EMBL:U67194) (89 aa) fasta scores: E(): 6.5e-12, 53.84% id in 78 aa, and to Pseudomonas sp. hypothetical 10.2 kDa protein orf2 SWALL:Q937D1 (EMBL:U66917) (93 aa) fasta scores: E(): 6.7e-12, 53.84% id in 78 aa, and to Rhizobium meliloti hypothetical protein rb0121 or smb20121 SWALL:Q92X41 (EMBL:AL603642) (91 aa) fasta scores: E(): 6.5e-10, 43.67% id in 87 aa; hypothetical protein 64060 3095446 BPSS0059 Burkholderia pseudomallei K96243 hypothetical protein YP_110083.1 63800 R 272560 CDS YP_110084.1 53721099 3096910 64719..64991 1 NC_006351.1 hypothetical protein 64991 3096910 BPSS0060 Burkholderia pseudomallei K96243 hypothetical protein YP_110084.1 64719 D 272560 CDS YP_110085.1 53721100 3096500 complement(65274..65573) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella typhi DNA-binding protein H-NS Hns SWALL:HNS_SALTY (SWALL:P17428) (136 aa) fasta scores: E(): 3, 29.31% id in 116 aa, and to Ralstonia solanacearum HNS-like transcription regulator protein rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 1.5e-14, 58.16% id in 98 aa; H-NS-like DNA-binding protein 65573 3096500 BPSS0060B Burkholderia pseudomallei K96243 H-NS-like DNA-binding protein YP_110085.1 65274 R 272560 CDS YP_110086.1 53721101 3097120 66124..67476 1 NC_006351.1 Similar to Escherichia coli alpha-ketoglutarate permease KgtP or WitA or b2587 SWALL:KGTP_ECOLI (SWALL:P17448) (432 aa) fasta scores: E(): 4.5e-84, 51.63% id in 428 aa, and to Ralstonia solanacearum alpha-ketoglutarate permease transmembrane protein rsp0007 or rs01979 SWALL:Q8XTU7 (EMBL:AL646076) (447 aa) fasta scores: E(): 5.9e-131, 77.87% id in 443 aa. CDS is extended at the N-terminus in comparison to orthologues; alpha-ketoglutarate permease 67476 kgtP 3097120 kgtP Burkholderia pseudomallei K96243 alpha-ketoglutarate permease YP_110086.1 66124 D 272560 CDS YP_110087.1 53721102 3096501 67529..69460 1 NC_006351.1 Similar to Ralstonia solanacearum probable C4-dicarboxylate transport sensor kinase transcription regulator protein dctb1 or rsp0008 or rs01980 SWALL:Q8XTU6 (EMBL:AL646076) (634 aa) fasta scores: E(): 4.7e-73, 54.57% id in 634 aa, and to Rhizobium leguminosarum C4-dicarboxylate transport sensor protein DctB SWALL:DCTB_RHILE (SWALL:P10047) (622 aa) fasta scores: E(): 2.3e-24, 31.02% id in 635 aa; C4-dicarboxylate transport sensor kinase 69460 3096501 BPSS0062 Burkholderia pseudomallei K96243 C4-dicarboxylate transport sensor kinase YP_110087.1 67529 D 272560 CDS YP_110088.1 53721103 3096711 69444..70790 1 NC_006351.1 Similar to Rhizobium meliloti C4-dicarboxylate transport transcriptional regulatory protein DctD or rb1525 or smb20613 SWALL:DCTD_RHIME (SWALL:P13632) (460 aa) fasta scores: E(): 7.2e-75, 51.82% id in 438 aa, and to Escherichia coli, and Escherichia coli O157:H7 nitrogen regulation protein Nr GlnG or NtrC or GlnT or b3868 or z5404 or ecs4790 SWALL:NTRC_ECOLI (SWALL:P06713) (469 aa) fasta scores: E(): 9.6e-53, 41.1% id in 472 aa; C4-dicarboxylate transport transcriptional response regulator 70790 dctD 3096711 dctD Burkholderia pseudomallei K96243 C4-dicarboxylate transport transcriptional response regulator YP_110088.1 69444 D 272560 CDS YP_110089.1 53721104 3096950 complement(72252..72812) 1 NC_006351.1 No significant database matches. Possible alternative translational start sites; hypothetical protein 72812 3096950 BPSS0064 Burkholderia pseudomallei K96243 hypothetical protein YP_110089.1 72252 R 272560 CDS YP_110090.1 53721105 3096942 73093..75045 1 NC_006351.1 Weak similarity to the C-terminal region of Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 3.5e-14, 30.93% id in 682 aa; hypothetical protein 75045 3096942 BPSS0065 Burkholderia pseudomallei K96243 hypothetical protein YP_110090.1 73093 D 272560 CDS YP_110091.1 53721106 3096943 75296..75802 1 NC_006351.1 Similar to the C-terminal region of Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 2.1e-10, 35.13% id in 148 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 4.4e-10, 36.55% id in 145 aa. Possible gene remnant; AraC family transcriptional regulator 75802 3096943 BPSS0066 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110091.1 75296 D 272560 CDS YP_110092.1 53721107 3096819 76174..78369 1 NC_006351.1 Similar to Pseudomonas aeruginosa non-hemolytic phospholipase C precursor PlcN or pa3319 SWALL:PHLN_PSEAE (SWALL:P15713) (692 aa) fasta scores: E(): 6e-54, 53.29% id in 728 aa, and to Burkholderia pseudomallei non-hemolytic phospholipase C precursor PlcN SWALL:PHLN_BURPS (SWALL:Q9RGS8) (700 aa) fasta scores: E(): 4e-39, 45.43% id in 744 aa; phospholipase C precursor 78369 3096819 BPSS0067 Burkholderia pseudomallei K96243 phospholipase C precursor YP_110092.1 76174 D 272560 CDS YP_110093.1 53721108 3095398 78867..79601 1 NC_006351.1 hypothetical protein 79601 3095398 BPSS0068 Burkholderia pseudomallei K96243 hypothetical protein YP_110093.1 78867 D 272560 CDS YP_110094.1 53721109 3095298 80077..81324 1 NC_006351.1 Similar to Escherichia coli transposase InsI for insertion sequence element IB30B/C/D (InsI1 or b0256) and (InsI2 or b1404) and (InsI3 or b4284) SWALL:INSI_ECOLI (SWALL:P37246) (383 aa) fasta scores: E(): 8.3e-21, 39.17% id in 388 aa, and to Alcaligenes eutrophus transposase for insertion sequence element IS1086 SWALL:TRA8_ALCEU (SWALL:P37248) (339 aa) fasta scores: E(): 3.8e-19, 42.2% id in 372 aa; transposase 81324 3095298 BPSS0070 Burkholderia pseudomallei K96243 transposase YP_110094.1 80077 D 272560 CDS YP_110095.1 53721110 3096894 complement(82938..83957) 1 NC_006351.1 Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 4.4e-20, 27.92% id in 333 aa and to Pseudomonas aeruginosa probable transcriptional regulator pa2704 SWALL:Q9I0D8 (EMBL:AE004698) (339 aa) fasta scores: E(): 3.1e-28, 32.39% id in 321 aa; regulatory protein 83957 3096894 BPSS0073 Burkholderia pseudomallei K96243 regulatory protein YP_110095.1 82938 R 272560 CDS YP_110096.1 53721111 3094937 84049..84411 1 NC_006351.1 hypothetical protein 84411 3094937 BPSS0074 Burkholderia pseudomallei K96243 hypothetical protein YP_110096.1 84049 D 272560 CDS YP_110097.1 53721112 3096148 84913..85833 1 NC_006351.1 Similar to Escherichia coli spermidine/putrescine transport system permease PotB or b1125 SWALL:POTB_ECOLI (SWALL:P23860) (275 aa) fasta scores: E(): 7.8e-29, 34.69% id in 245 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa0325 SWALL:Q9I6G6 (EMBL:AE004470) (309 aa) fasta scores: E(): 3.4e-49, 49.08% id in 273 aa; ABC transporter membrane protein 85833 3096148 BPSS0075 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_110097.1 84913 D 272560 CDS YP_110098.1 53721113 3096149 85817..86671 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 spermidine/putrescine transport system permease PotC or b1124 or c1399 or z1763 or ecs1500 SWALL:POTC_ECOLI (SWALL:P23859) (264 aa) fasta scores: E(): 8.6e-29, 33.84% id in 260 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa0324 SWALL:Q9I6G7 (EMBL:AE004470) (262 aa) fasta scores: E(): 2.9e-42, 47.52% id in 263 aa; ABC transporter membrane protein 86671 3096149 BPSS0076 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_110098.1 85817 D 272560 CDS YP_110099.1 53721114 3096530 86668..87699 1 NC_006351.1 Similar to Escherichia coli spermidine/putrescine-binding periplasmic protein precursor PotD or b1123 SWALL:POTD_ECOLI (SWALL:P23861) (348 aa) fasta scores: E(): 2.3e-25, 26.23% id in 343 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa0323 SWALL:Q9I6G8 (EMBL:AE004470) (347 aa) fasta scores: E(): 9.7e-69, 48.19% id in 332 aa; ABC transport system, exported substrate-binding protein 87699 3096530 BPSS0077 Burkholderia pseudomallei K96243 ABC transport system, exported substrate-binding protein YP_110099.1 86668 D 272560 CDS YP_110100.1 53721115 3096878 88287..88592 1 NC_006351.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0335 or rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 1.5e-10, 43.29% id in 97 aa, and to Bordetella pertussis Bph3 SWALL:O07507 (EMBL:U82566) (123 aa) fasta scores: E(): 0.00073, 32.72% id in 110 aa; HNS-like regulatory protein 88592 3096878 BPSS0077A Burkholderia pseudomallei K96243 HNS-like regulatory protein YP_110100.1 88287 D 272560 CDS YP_110101.1 53721116 3096879 88921..91692 1 NC_006351.1 Similar to Ralstonia solanacearum VGR-related protein rsp0518 or rs06151 SWALL:Q8XSF8 (EMBL:AL646079) (908 aa) fasta scores: E(): 1.1e-90, 41.55% id in 900 aa, and to Escherichia coli VgrE protein SWALL:O52660 (EMBL:AF044499) (702 aa) fasta scores: E(): 0.00017, 25% id in 532 aa; hypothetical protein 91692 3096879 BPSS0078 Burkholderia pseudomallei K96243 hypothetical protein YP_110101.1 88921 D 272560 CDS YP_110102.1 53721117 3096725 91706..93946 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0260 SWALL:Q9I6M9 (EMBL:AE004464) (716 aa) fasta scores: E(): 1.5e-24, 31.81% id in 770 aa; hypothetical protein 93946 3096725 BPSS0079 Burkholderia pseudomallei K96243 hypothetical protein YP_110102.1 91706 D 272560 CDS YP_110103.1 53721118 3096780 94259..95614 1 NC_006351.1 Similar to parts of Pseudomonas aeruginosa hypothetical protein pa0259 SWALL:Q9I6N0 (EMBL:AE004464) (480 aa) fasta scores: E(): 2.3e-15, 27.19% id in 478 aa; hypothetical protein 95614 3096780 BPSS0080 Burkholderia pseudomallei K96243 hypothetical protein YP_110103.1 94259 D 272560 CDS YP_110104.1 53721119 3096781 95624..95887 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein RSC3217 or RS02434 SWALL:Q8XUH1 (EMBL:AL646074) (90 aa) fasta scores: E(): 3e-20, 62.79% id in 86 aa, and to the N-terminal region of Burkholderia thailandensis bacteriophage protein GP29 SWALL:Q8VP97 (EMBL:AY063741) (186 aa) fasta scores: E(): 5e-07, 42.35% id in 85 aa; hypothetical protein 95887 3096781 BPSS0080a Burkholderia pseudomallei K96243 hypothetical protein YP_110104.1 95624 D 272560 CDS YP_110105.1 53721120 3096886 complement(96302..96721) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YjbQ or b4056 or z5655 or ecs5038 SWALL:YJBQ_ECOLI (SWALL:P32698) (138 aa) fasta scores: E(): 1.2e-18, 42.85% id in 133 aa, and to Rhizobium meliloti hypothetical protein r02310 or smc01559 SWALL:Q92NA3 (EMBL:AL591790) (140 aa) fasta scores: E(): 6.2e-28, 56.42% id in 140 aa; hypothetical protein 96721 3096886 BPSS0081 Burkholderia pseudomallei K96243 hypothetical protein YP_110105.1 96302 R 272560 CDS YP_110106.1 53721121 3096747 complement(96741..97067) 1 NC_006351.1 Similar to Xanthomonas axonopodis thioredoxin TrxA or xac0109 SWALL:AAM35001 (EMBL:AE011634) (109 aa) fasta scores: E(): 2.1e-17, 50% id in 96 aa, and to Pseudomonas aeruginosa probable thioredoxin pa2694 SWALL:Q9I0E8 (EMBL:AE004697) (108 aa) fasta scores: E(): 1.1e-22, 60.78% id in 102 aa; thioredoxin 97067 3096747 BPSS0082 Burkholderia pseudomallei K96243 thioredoxin YP_110106.1 96741 R 272560 CDS YP_110107.1 53721122 3096748 97539..98231 1 NC_006351.1 hypothetical protein 98231 3096748 BPSS0083 Burkholderia pseudomallei K96243 hypothetical protein YP_110107.1 97539 D 272560 CDS YP_110108.1 53721123 3094975 complement(98817..99440) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0361 or rs03329 SWALL:Q8Y2H5 (EMBL:AL646058) (171 aa) fasta scores: E(): 2e-11, 33.96% id in 159 aa. Weakly similar to Bordetella parapertussis membrane protein bpp4203 SWALL:Q7W345 (EMBL:BX640436) (181 aa) fasta scores: E(): 0.00057, 27.16% id in 162 aa. CDS is extended at the C- and N-termini in comparison to the R. solanacearum protein. The presence of a gene remnant overlapping the C-terminus of the CDS (BPSS0084) suggest that this may be a partial gene; hypothetical protein 99440 3094975 BPSS0085 Burkholderia pseudomallei K96243 hypothetical protein YP_110108.1 98817 R 272560 CDS YP_110109.1 53721124 3094976 complement(99533..101128) 1 NC_006351.1 Similar to Bradyrhizobium japonicum cytochrome C oxidase polypeptide I CtaD or CoxA SWALL:COX1_BRAJA (SWALL:P31833) (541 aa) fasta scores: E(): 3.4e-116, 54.49% id in 534 aa, and to Rhizobium leguminosarum cytochrome C oxidase polypeptide I CtaD or CoxA SWALL:COX1_RHILE (SWALL:Q08855) (538 aa) fasta scores: E(): 5.8e-116, 56.18% id in 534 aa; cytochrome C oxidase-related protein 101128 3094976 BPSS0086 Burkholderia pseudomallei K96243 cytochrome C oxidase-related protein YP_110109.1 99533 R 272560 CDS YP_110110.1 53721125 3096831 complement(102280..103737) 1 NC_006351.1 hypothetical protein 103737 3096831 BPSS0087 Burkholderia pseudomallei K96243 hypothetical protein YP_110110.1 102280 R 272560 CDS YP_110111.1 53721126 3095776 105290..107227 1 NC_006351.1 No significant database matches to the full length CDS. Similar to parts of Xanthomonas axonopodis outer membrane protein XadA or xac3546 SWALL:AAM38389 (EMBL:AE012003) (2190 aa) fasta scores: E(): 1.5e-48, 41.17% id in 629 aa; hypothetical protein 107227 3095776 BPSS0088 Burkholderia pseudomallei K96243 hypothetical protein YP_110111.1 105290 D 272560 CDS YP_110112.1 53721127 3095777 complement(107294..108781) 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane protein rsp0161 or rs05517 SWALL:Q8XTF1 (EMBL:AL646076) (517 aa) fasta scores: E(): 3.2e-115, 57.32% id in 485 aa, and to Xanthomonas axonopodis hypothetical protein xac3119 SWALL:AAM37964 (EMBL:AE011956) (504 aa) fasta scores: E(): 2.5e-104, 53.07% id in 471 aa; hypothetical protein 108781 3095777 BPSS0089 Burkholderia pseudomallei K96243 hypothetical protein YP_110112.1 107294 R 272560 CDS YP_110113.1 53721128 3095759 complement(109043..109597) 1 NC_006351.1 Low similarity to Yersinia pestis exported protein ypo1208 SWALL:Q8ZGS3 (EMBL:AJ414147) (175 aa) fasta scores: E(): 3.4e-08, 27.71% id in 166 aa, and to Salmonella typhimurium inner membrane protein YfaZ or stm2294 SWALL:Q8ZNF6 (EMBL:AE008803) (215 aa) fasta scores: E(): 8.4e-07, 29.56% id in 159 aa; hypothetical protein 109597 3095759 BPSS0090 Burkholderia pseudomallei K96243 hypothetical protein YP_110113.1 109043 R 272560 CDS YP_110114.1 53721129 3096870 110182..110727 1 NC_006351.1 Similar to Escherichia coli f17 fimbrial protein precursor f17a-A SWALL:FMF3_ECOLI (SWALL:P11312) (180 aa) fasta scores: E(): 1.1e-12, 35% id in 180 aa, and to Yersinia pestis frimbrial protein ypo2945 SWALL:Q8ZCN6 (EMBL:AJ414154) (181 aa) fasta scores: E(): 4.5e-15, 37.83% id in 185 aa; fimbrial protein 110727 3096870 BPSS0091 Burkholderia pseudomallei K96243 fimbrial protein YP_110114.1 110182 D 272560 CDS YP_110115.1 53721130 3096871 110792..111529 1 NC_006351.1 Similar to Escherichia coli chaperone protein precursor EcpD or b0140 SWALL:ECPD_ECOLI (SWALL:P33128) (246 aa) fasta scores: E(): 3.4e-36, 45.04% id in 242 aa, and to Bordetella pertussis chaperone protein precursor FimB or FhaD SWALL:FIMB_BORPE (SWALL:P33409) (244 aa) fasta scores: E(): 4.8e-31, 44.08% id in 245 aa; fimbria-related chaperone 111529 3096871 BPSS0092 Burkholderia pseudomallei K96243 fimbria-related chaperone YP_110115.1 110792 D 272560 CDS YP_110116.1 53721131 3096795 111753..114386 1 NC_006351.1 Similar to Escherichia coli outer membrane usher protein precursor AfaC SWALL:AFAC_ECOLI (SWALL:P53517) (859 aa) fasta scores: E(): 8.4e-77, 33.4% id in 877 aa; outer membrane usher protein 114386 3096795 BPSS0093 Burkholderia pseudomallei K96243 outer membrane usher protein YP_110116.1 111753 D 272560 CDS YP_110117.1 53721132 3096791 114379..114951 1 NC_006351.1 Similar to Xylella fastidiosa fimbrial subunit precursor xf0083 SWALL:Q9PH63 (EMBL:AE003862) (184 aa) fasta scores: E(): 9.2e-12, 37.5% id in 176 aa, and to Escherichia coli F17 fimbrial protein precursor F17a-A SWALL:FMF3_ECOLI (SWALL:P11312) (180 aa) fasta scores: E(): 4.4e-10, 38.46% id in 169 aa; fimbria subunit protein 114951 3096791 BPSS0094 Burkholderia pseudomallei K96243 fimbria subunit protein YP_110117.1 114379 D 272560 CDS YP_110118.1 53721133 3096792 115016..115672 1 NC_006351.1 Similar to Yersinia pestis membrane protein ypo1468 or ypo0975 or y2703 or y3366 SWALL:Q8XF18 (EMBL:AJ414148) (228 aa) fasta scores: E(): 8.8e-07, 27.67% id in 206 aa; hypothetical protein 115672 3096792 BPSS0095 Burkholderia pseudomallei K96243 hypothetical protein YP_110118.1 115016 D 272560 CDS YP_110119.1 53721134 3096859 115675..117351 1 NC_006351.1 Similar to Yersinia pestis membrane protein ypo2953 or y1530 SWALL:Q8ZCM8 (EMBL:AJ414154) (560 aa) fasta scores: E(): 8.4e-25, 23.54% id in 565 aa, and to Yersinia pestis OmpA-family membrane protein ypo0974 or y2702 or y3365 SWALL:Q8ZHC6 (EMBL:AJ414145) (578 aa) fasta scores: E(): 7.2e-19, 28.17% id in 575 aa; OmpA family protein 117351 3096859 BPSS0096 Burkholderia pseudomallei K96243 OmpA family protein YP_110119.1 115675 D 272560 CDS YP_110120.1 53721135 3096823 117729..118268 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo2939 SWALL:Q8ZCN9 (EMBL:AJ414154) (174 aa) fasta scores: E(): 2.4e-48, 84.75% id in 164 aa, and to Salmonella typhi hypothetical protein sty0297 SWALL:Q8Z970 (EMBL:AL627266) (180 aa) fasta scores: E(): 6.7e-48, 76.66% id in 180 aa. Note: Also similar to BPSS0173 (194 aa) fasta scores: E(): 2e-48, 81.818% identity in 165 aa overlap; hypothetical protein 118268 3096823 BPSS0097 Burkholderia pseudomallei K96243 hypothetical protein YP_110120.1 117729 D 272560 CDS YP_110121.1 53721136 3096824 118302..119801 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo2938 SWALL:Q8ZCP0 (EMBL:AJ414154) (500 aa) fasta scores: E(): 1.3e-175, 84.6% id in 500 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciI protein SWALL:Q93IS7 (EMBL:AJ320483) (497 aa) fasta scores: E(): 9.3e-171, 83.36% id in 499 aa. Note: Also similar to BPSS0172 (500 aa) fasta scores: E(): 1.5e-182, 84.168% identity in 499 aa overlap; hypothetical protein 119801 3096824 BPSS0098 Burkholderia pseudomallei K96243 hypothetical protein YP_110121.1 118302 D 272560 CDS YP_110122.1 53721137 3096775 120001..120483 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0279 or SciM SWALL:Q93IS3 (EMBL:AE008707) (161 aa) fasta scores: E(): 8e-39, 63.29% id in 158 aa, and to Yersinia pestis hypothetical protein ypo2937 SWALL:Q8ZCP1 (EMBL:AJ414154) (161 aa) fasta scores: E(): 7.9e-38, 55.69% id in 158 aa. Note: Also similar to BPSS0171 (162 aa) fasta scores: E(): 1.8e-43, 66.456% identity in 158 aa overlap; hypothetical protein 120483 3096775 BPSS0099 Burkholderia pseudomallei K96243 hypothetical protein YP_110122.1 120001 D 272560 CDS YP_110123.1 53721138 3096919 120671..121153 1 NC_006351.1 Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciN protein precursor SciN SWALL:Q93IS2 (EMBL:AJ320483) (163 aa) fasta scores: E(): 5.3e-21, 39.21% id in 153 aa, and to Pseudomonas aeruginosa hypothetical protein pa0080 SWALL:Q9I752 (EMBL:AE004447) (154 aa) fasta scores: E(): 1.4e-12, 35.24% id in 122 aa. Note: Also similar to BPSS0170 (171 aa) fasta scores: E(): 5.8e-24, 45.860% identity in 157 aa overlap; hypothetical protein 121153 3096919 BPSS0100 Burkholderia pseudomallei K96243 hypothetical protein YP_110123.1 120671 D 272560 CDS YP_110124.1 53721139 3096920 121159..122508 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo2934 or y1549 SWALL:Q8ZCP3 (EMBL:AJ414154) (449 aa) fasta scores: E(): 3.1e-111, 62.61% id in 444 aa, and to Salmonella typhi hypothetical protein sty0304 SWALL:Q8Z966 (EMBL:AL627266) (447 aa) fasta scores: E(): 2.7e-97, 57.9% id in 449 aa. Note: Also similar to BPSS0169 (449 aa) fasta scores: E(): 1.1e-108, 62.054% identity in 448 aa overlap; hypothetical protein 122508 3096920 BPSS0101 Burkholderia pseudomallei K96243 hypothetical protein YP_110124.1 121159 D 272560 CDS YP_110125.1 53721140 3096743 122505..123806 1 NC_006351.1 Similar to Salmonella typhi membrane protein sty0305 SWALL:Q8Z965 (EMBL:AL627266) (433 aa) fasta scores: E(): 1.8e-76, 55.78% id in 380 aa, and to Yersinia pestis OmpA-family membrane protein ypo0514 SWALL:Q8ZII3 (EMBL:AJ414143) (536 aa) fasta scores: E(): 3.2e-24, 30.93% id in 375 aa. Note: The N-terminal region of this CDS does not present similarities to any of the database matches. Also similar to BPSS0168 (422 aa) fasta scores: E(): 1.9e-61, 46.283% identity in 417 aa overlap; hypothetical protein 123806 3096743 BPSS0102 Burkholderia pseudomallei K96243 hypothetical protein YP_110125.1 122505 D 272560 CDS YP_110126.1 53721141 3096739 123821..127729 1 NC_006351.1 Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciS protein precursor SWALL:Q93IR7 (EMBL:AJ320483) (1289 aa) fasta scores: E(): 8.3e-165, 45.82% id in 1305 aa, and to Yersinia pestis membrane protein ypo2724 SWALL:Q8ZD68 (EMBL:AJ414153) (1275 aa) fasta scores: E(): 2.4e-94, 34.01% id in 1317 aa. Note: Also similar to BPSS0167 (1359 aa) fasta scores: E(): 3.2e-101, 47.210% identity in 1362 aa overlap; hypothetical protein 127729 3096739 BPSS0103 Burkholderia pseudomallei K96243 hypothetical protein YP_110126.1 123821 D 272560 CDS YP_110127.1 53721142 3096740 127919..128488 1 NC_006351.1 hypothetical protein 128488 3096740 BPSS0104 Burkholderia pseudomallei K96243 hypothetical protein YP_110127.1 127919 D 272560 CDS YP_110128.1 53721143 3096600 128553..131252 1 NC_006351.1 Similar in almost its full length to Yersinia pestis hypothetical protein ypo2725 SWALL:Q8ZD67 (EMBL:AJ414153) (921 aa) fasta scores: E(): 8e-76, 45.87% id in 896 aa, C-terminal region to Shigella flexneri Rhs-family protein sf0265 SWALL:AAN41925 (EMBL:AE015061) (737 aa) fasta scores: E(): 7.7e-48, 41.75% id in 697 aa, and C-terminal region where the highly repetitive fragment is to Thermoproteus tenax virus 1 viral protein Tpx SWALL:VTP3_TTV1V (SWALL:P19275) (474 aa) fasta scores: E(): 1.6e-32, 59.53% id in 304 aa. Note: Contains a highly repetitive region at the C-terminal domain; hypothetical protein 131252 3096600 BPSS0105 Burkholderia pseudomallei K96243 hypothetical protein YP_110128.1 128553 D 272560 CDS YP_110129.1 53721144 3096703 complement(134954..136312) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo2951 or y1532 SWALL:Q8ZCN0 (EMBL:AJ414154) (445 aa) fasta scores: E(): 4e-50, 36.11% id in 407 aa; hypothetical protein 136312 3096703 BPSS0108 Burkholderia pseudomallei K96243 hypothetical protein YP_110129.1 134954 R 272560 CDS YP_110130.1 53721145 3096704 complement(136345..137373) 1 NC_006351.1 Similar to Yersinia pestis fimbrial protein ypo2950 or y1533 SWALL:Q8ZCN1 (EMBL:AJ414154) (343 aa) fasta scores: E(): 0.00019, 23.52% id in 357 aa, and C-terminal region to Salmonella typhimurium fimbrial-like protein precursor FimF or stm0548 SWALL:FIMF_SALTY (SWALL:P37926) (172 aa) fasta scores: E(): 0.41, 27.38% id in 168 aa; hypothetical protein 137373 3096704 BPSS0109 Burkholderia pseudomallei K96243 hypothetical protein YP_110130.1 136345 R 272560 CDS YP_110131.1 53721146 3096818 complement(137428..138498) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0266 or SciA SWALL:Q93IT5 (EMBL:AE008707) (351 aa) fasta scores: E(): 9.6e-42, 43.42% id in 350 aa, and to Yersinia pestis hypothetical protein ypo2949 SWALL:Q8ZCN2 (EMBL:AJ414154) (393 aa) fasta scores: E(): 1.1e-31, 38.03% id in 376 aa. Note: Also similar to BPSS0180 (382 aa) fasta scores: E(): 3.7e-28, 44.101% identity in 356 aa overlap; hypothetical protein 138498 3096818 BPSS0110 Burkholderia pseudomallei K96243 hypothetical protein YP_110131.1 137428 R 272560 CDS YP_110132.1 53721147 3096745 complement(138517..139566) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo2948 SWALL:Q8ZCN3 (EMBL:AJ414154) (341 aa) fasta scores: E(): 5.7e-72, 52.1% id in 332 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 9.5e-68, 57.54% id in 285 aa. Note: Also similar to BPSS0179 (363 aa) fasta scores: E(): 2.8e-68, 55.224% identity in 335 aa overlap; hypothetical protein 139566 3096745 BPSS0111 Burkholderia pseudomallei K96243 hypothetical protein YP_110132.1 138517 R 272560 CDS YP_110133.1 53721148 3096746 complement(139563..141443) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo2947 or y1537 SWALL:Q8ZCN4 (EMBL:AJ414154) (626 aa) fasta scores: E(): 3.3e-177, 64.05% id in 626 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciC protein SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E(): 8.1e-163, 60.92% id in 627 aa. Note: Also similar to BPSS0178 (630 aa) fasta scores: E(): 1.5e-156, 63.796% identity in 627 aa overlap; hypothetical protein 141443 3096746 BPSS0112 Burkholderia pseudomallei K96243 hypothetical protein YP_110133.1 139563 R 272560 CDS YP_110134.1 53721149 3094983 complement(141445..141963) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0269 or SciD SWALL:Q93IT2 (EMBL:AE008707) (164 aa) fasta scores: E(): 1.2e-21, 43.79% id in 153 aa, and to Yersinia pestis hypothetical protein ypo2728 or y1561 SWALL:Q8ZD64 (EMBL:AJ414153) (159 aa) fasta scores: E(): 3.1e-20, 40.12% id in 157 aa. Note: Also similar to BPSS0177 (194 aa) fasta scores: E(): 1.6e-24, 45.912% identity in 159 aa overlap; hypothetical protein 141963 3094983 BPSS0113 Burkholderia pseudomallei K96243 hypothetical protein YP_110134.1 141445 R 272560 CDS YP_110135.1 53721150 3094984 complement(141950..142804) 1 NC_006351.1 Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciE protein SWALL:Q93IT1 (EMBL:AJ320483) (279 aa) fasta scores: E(): 5.9e-38, 39.85% id in 276 aa, and to Yersinia pestis hypothetical protein ypo2727 or y1560 SWALL:Q8ZD65 (EMBL:AJ414153) (268 aa) fasta scores: E(): 8.6e-36, 39.36% id in 254 aa. Note: Also similar to BPSS0176 (322 aa) fasta scores: E(): 4.8e-29, 39.590% identity in 293 aa overlap; hypothetical protein 142804 3094984 BPSS0114 Burkholderia pseudomallei K96243 hypothetical protein YP_110135.1 141950 R 272560 CDS YP_110136.1 53721151 3096151 complement(142788..143843) 1 NC_006351.1 hypothetical protein 143843 3096151 BPSS0115 Burkholderia pseudomallei K96243 hypothetical protein YP_110136.1 142788 R 272560 CDS YP_110137.1 53721152 3097105 144273..146918 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium ATPase with chaperone activity, homolog of Yersinia ClpB stm0272 or SciG SWALL:Q93IS9 (EMBL:AE008707) (879 aa) fasta scores: E(): 4.1e-196, 63.58% id in 865 aa, and to Yersinia pestis Clp ATPase ClpB or ypo0506 or y3669 SWALL:Q8ZIJ2 (EMBL:AJ414143) (867 aa) fasta scores: E(): 1.9e-121, 44.6% id in 843 aa; chaperone-related protein 146918 3097105 BPSS0116 Burkholderia pseudomallei K96243 chaperone-related protein YP_110137.1 144273 D 272560 CDS YP_110138.1 53721153 3097106 complement(147309..150353) 1 NC_006351.1 Similar to Ralstonia solanacearum probable capsular synthesis regulatory RcsC or rsp1622 or rs02179 SWALL:Q8XPL6 (EMBL:AL646086) (1098 aa) fasta scores: E(): 1.2e-48, 27.88% id in 1126 aa, and C-terminal region to Escherichia coli sensor protein EvgS precursor or b2370 SWALL:EVGS_ECOLI (SWALL:P30855) (1197 aa) fasta scores: E(): 2.1e-40, 32.07% id in 555 aa; histidine kinase/response regulator fusion protein 150353 3097106 BPSS0117 Burkholderia pseudomallei K96243 histidine kinase/response regulator fusion protein YP_110138.1 147309 R 272560 CDS YP_110139.1 53721154 3096741 151025..151285 1 NC_006351.1 hypothetical protein 151285 3096741 BPSS0118 Burkholderia pseudomallei K96243 hypothetical protein YP_110139.1 151025 D 272560 CDS YP_110140.1 53721155 3096821 complement(151956..152618) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 capsular synthesis regulator component B RcsB or b2217 or c2760 or z3476 or ecs3106 SWALL:RCSB_ECOLI (SWALL:P14374) (216 aa) fasta scores: E(): 9.3e-24, 41.34% id in 208 aa, and to Pseudomonas aeruginosa probable response regulator pa4080 SWALL:Q9HWU8 (EMBL:AE004824) (214 aa) fasta scores: E(): 6.8e-35, 47.84% id in 209 aa. Note: Also similar to BPSS0124 (243 aa) fasta scores: E(): 3.7e-33, 45.283% identity in 212 aa overlap; two-component system response regulator 152618 3096821 BPSS0119 Burkholderia pseudomallei K96243 two-component system response regulator YP_110140.1 151956 R 272560 CDS YP_110141.1 53721156 3096822 complement(153167..155551) 1 NC_006351.1 Similar to Yersinia pestis outer membrane fimbrial usher protein ypo0302 or y0562 SWALL:Q8ZJ27 (EMBL:AJ414142) (792 aa) fasta scores: E(): 1.4e-120, 42.67% id in 764 aa, and to Escherichia coli outer membrane usher protein precursor FanD SWALL:FAND_ECOLI (SWALL:P12050) (783 aa) fasta scores: E(): 5.4e-22, 22.91% id in 768 aa; fimbrial usher protein 155551 3096822 BPSS0120 Burkholderia pseudomallei K96243 fimbrial usher protein YP_110141.1 153167 R 272560 CDS YP_110142.1 53721157 3096514 complement(155912..156622) 1 NC_006351.1 member of the periplasmic pilus chaperone family of proteins; periplasmic chaperone protein 156622 3096514 BPSS0121 Burkholderia pseudomallei K96243 periplasmic chaperone protein YP_110142.1 155912 R 272560 CDS YP_110143.1 53721158 3096377 complement(157098..157745) 1 NC_006351.1 Similar to Yersinia pestis exported protein ypo0301 or y0561 SWALL:Q8ZJ28 (EMBL:AJ414142) (212 aa) fasta scores: E(): 3.1e-26, 41.09% id in 219 aa; hypothetical protein 157745 3096377 BPSS0122 Burkholderia pseudomallei K96243 hypothetical protein YP_110143.1 157098 R 272560 CDS YP_110144.1 53721159 3096378 complement(157968..158624) 1 NC_006351.1 Similar to Yersinia pestis exported protein ypo0301 or y0561 SWALL:Q8ZJ28 (EMBL:AJ414142) (212 aa) fasta scores: E(): 6.2e-34, 48.13% id in 214 aa; hypothetical protein 158624 3096378 BPSS0123 Burkholderia pseudomallei K96243 hypothetical protein YP_110144.1 157968 R 272560 CDS YP_110145.1 53721160 3096846 159632..160324 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 capsular synthesis regulator component B RcsB or b2217 or c2760 or z3476 or ecs3106 SWALL:RCSB_ECOLI (SWALL:P14374) (216 aa) fasta scores: E(): 1.5e-21, 35.61% id in 205 aa, and to Pseudomonas aeruginosa probable response regulator pa4080 SWALL:Q9HWU8 (EMBL:AE004824) (214 aa) fasta scores: E(): 9.9e-31, 47.61% id in 210 aa. Note: Also similar to BPSS0119 (221 aa) fasta scores: E(): 6.9e-29, 45.283% identity in 212 aa overlap; response regulator 160324 3096846 BPSS0124 Burkholderia pseudomallei K96243 response regulator YP_110145.1 159632 D 272560 CDS YP_110146.1 53721161 3097252 complement(160633..160926) 1 NC_006351.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 4e-06, 34.4% id in 93 aa, and low similarity to Rhodobacter capsulatus trans-acting regulatory protein HvrA SWALL:HVRA_RHOCA (SWALL:P42505) (102 aa) fasta scores: E(): 0.84, 31.64% id in 79 aa; regulatory protein 160926 3097252 BPSS0125 Burkholderia pseudomallei K96243 regulatory protein YP_110146.1 160633 R 272560 CDS YP_110147.1 53721162 3097253 161417..162742 1 NC_006351.1 Similar to Agrobacterium vitis tartrate transporter TtuB SWALL:TUB3_AGRVI (SWALL:P70786) (449 aa) fasta scores: E(): 1.5e-62, 42.23% id in 412 aa, and to Xanthomonas campestris MFS transporter xcc4227 SWALL:AAM43443 (EMBL:AE012550) (461 aa) fasta scores: E(): 1.2e-100, 61.88% id in 446 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches; transport system, membrane protein 162742 3097253 BPSS0126 Burkholderia pseudomallei K96243 transport system, membrane protein YP_110147.1 161417 D 272560 CDS YP_110148.1 53721163 3096478 162816..163982 1 NC_006351.1 Similar to Escherichia coli glycerate kinase 1 GlxK or GlxB5 or b0514 SWALL:GRK1_ECOLI (SWALL:P77364) (381 aa) fasta scores: E(): 2.6e-63, 55.05% id in 376 aa, and to Xanthomonas axonopodis glycerate kinase xac4360 SWALL:AAM39190 (EMBL:AE012090) (389 aa) fasta scores: E(): 1.6e-77, 64.3% id in 381 aa; glycerate kinase 1 163982 glxK 3096478 glxK Burkholderia pseudomallei K96243 glycerate kinase 1 YP_110148.1 162816 D 272560 CDS YP_110149.1 53721164 3095795 164175..165629 1 NC_006351.1 Similar to Bacillus stearothermophilus pyruvate kinase Pyk SWALL:KPYK_BACST (SWALL:Q02499) (587 aa) fasta scores: E(): 1.7e-60, 41.27% id in 470 aa, and to Pseudomonas aeruginosa pyruvate kinase I PykF or pa1498 SWALL:Q9I3L4 (EMBL:AE004578) (477 aa) fasta scores: E(): 1.5e-83, 55.57% id in 466 aa; pyruvate kinase 165629 pyk 3095795 pyk Burkholderia pseudomallei K96243 pyruvate kinase YP_110149.1 164175 D 272560 CDS YP_110150.1 53721165 3095658 165876..167096 1 NC_006351.1 Similar to Escherichia coli carbohydrate diacid regulator CdaR or SdaR SWALL:CDAR_ECOLI (SWALL:P37047) (385 aa) fasta scores: E(): 8.2e-49, 40.63% id in 379 aa, and to Xanthomonas campestris sugar diacide regulator xcc4225 SWALL:Q8P353 (EMBL:AE012550) (392 aa) fasta scores: E(): 2.2e-47, 40.56% id in 392 aa; transcriptional regulator 167096 3095658 BPSS0129 Burkholderia pseudomallei K96243 transcriptional regulator YP_110150.1 165876 D 272560 CDS YP_110151.1 53721166 3096839 168157..170964 1 NC_006351.1 Similar in its full length to Ralstonia solanacearum peptide synthase rsp1419 or rs03122 SWALL:Q8XQ67 (EMBL:AL646084) (937 aa) fasta scores: E(): 0, 61.11% id in 936 aa, and in its N-terminal region to Bacillus subtilis polyketide synthase PksJ SWALL:PKSJ_BACSU (SWALL:P40806) (557 aa) fasta scores: E(): 8.8e-64, 35.95% id in 534 aa; peptide synthase 170964 3096839 BPSS0130 Burkholderia pseudomallei K96243 peptide synthase YP_110151.1 168157 D 272560 CDS YP_110152.1 53721167 3096840 170998..171984 1 NC_006351.1 Similar to Rhizobium meliloti epimerase dehydratase, red superfamily, possibly UDP-glucose 4-epimerase rb0631 or smb21052 SWALL:Q92VR8 (EMBL:AL603644) (321 aa) fasta scores: E(): 1.5e-08, 26.68% id in 311 aa, and to Streptomyces avermitilis dtdp-glucose 4,6-dehydratase AveBII SWALL:Q9S0P5 (EMBL:AB032523) (355 aa) fasta scores: E(): 1.1e-07, 25.76% id in 260 aa; dehydratase 171984 3096840 BPSS0131 Burkholderia pseudomallei K96243 dehydratase YP_110152.1 170998 D 272560 CDS YP_110153.1 53721168 3096484 172008..172403 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr5282 SWALL:Q98C61 (EMBL:AP003006) (148 aa) fasta scores: E(): 6.3e-06, 29.45% id in 129 aa; hypothetical protein 172403 3096484 BPSS0132 Burkholderia pseudomallei K96243 hypothetical protein YP_110153.1 172008 D 272560 CDS YP_110154.1 53721169 3096512 172666..173691 1 NC_006351.1 Similar to Actinomadura hibisca ORF6 SWALL:O32456 (EMBL:D87924) (341 aa) fasta scores: E(): 3e-36, 36.73% id in 343 aa, and to Streptomyces lipmanii O-demethylpuromycin-O-methyltransferase DmpM SWALL:DMPM_STRLP (SWALL:P42712) (376 aa) fasta scores: E(): 7.8e-32, 35.65% id in 331 aa; methyltransferase 173691 3096512 BPSS0133 Burkholderia pseudomallei K96243 methyltransferase YP_110154.1 172666 D 272560 CDS YP_110155.1 53721170 3096513 complement(173732..174673) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1e-25, 34.23% id in 295 aa, and to Pseudomonas putida transcriptional regulator, pp1393 SWALL:AAN67016 (EMBL:AE016779) (291 aa) fasta scores: E(): 7.9e-30, 38.88% id in 288 aa. Note: This CDS is longer in its N-terminal region than most of its database matches, lacks an appropriate translational start codon. Possible pseudogene; LysR family transcriptional regulator 174673 3096513 BPSS0134 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110155.1 173732 R 272560 CDS YP_110156.1 53721171 3096509 174740..175159 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp1479 or rs03064 SWALL:Q8XQ07 (EMBL:AL646085) (150 aa) fasta scores: E(): 2e-17, 45.86% id in 133 aa; hypothetical protein 175159 3096509 BPSS0135 Burkholderia pseudomallei K96243 hypothetical protein YP_110156.1 174740 D 272560 CDS YP_110157.1 53721172 3096594 complement(175204..176592) 1 NC_006351.1 Similar in its full length to Ralstonia solanacearum probable transmembrane protein rsc3143 or rs00460 SWALL:Q8XUP3 (EMBL:AL646073) (459 aa) fasta scores: E(): 1e-97, 58.48% id in 448 aa, and to Bradyrhizobium japonicum two-component hybrid sensor and regulator blr5677 SWALL:BAC50942 (EMBL:AP005955) (941 aa) fasta scores: E(): 1.7e-17, 32.38% id in 315 aa; hypothetical protein 176592 3096594 BPSS0136 Burkholderia pseudomallei K96243 hypothetical protein YP_110157.1 175204 R 272560 CDS YP_110158.1 53721173 3096595 177878..178165 1 NC_006351.1 hypothetical protein 178165 3096595 BPSS0137 Burkholderia pseudomallei K96243 hypothetical protein YP_110158.1 177878 D 272560 CDS YP_110159.1 53721174 3095948 178341..178646 1 NC_006351.1 No significant database matches. Possible alternative translational start site; hypothetical protein 178646 3095948 BPSS0138 Burkholderia pseudomallei K96243 hypothetical protein YP_110159.1 178341 D 272560 CDS YP_110160.1 53721175 3096726 179358..180737 1 NC_006351.1 Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 180737 3096726 BPSS0139 Burkholderia pseudomallei K96243 mercuric reductase YP_110160.1 179358 D 272560 CDS YP_110161.1 53721176 3096727 complement(180870..181817) 1 NC_006351.1 Similar to Escherichia coli O157:H7 periplasmic ribose-binding protein of ABC transport system z5689 or ecs5071 SWALL:Q8X5Q6 (EMBL:AE005642) (313 aa) fasta scores: E(): 3.9e-54, 54.27% id in 304 aa, and to Bacillus subtilis D-ribose-binding protein precursor RbsB SWALL:RBSB_BACSU (SWALL:P36949) (305 aa) fasta scores: E(): 1.6e-17, 31.31% id in 281 aa; sugar ABC transport system, lipoprotein 181817 3096727 BPSS0140 Burkholderia pseudomallei K96243 sugar ABC transport system, lipoprotein YP_110161.1 180870 R 272560 CDS YP_110162.1 53721177 3096664 complement(181894..182928) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribose transport system permease RbsC or b3750 or c4678 or z5251 or ecs4692 SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 6e-36, 45.48% id in 310 aa, and to Yersinia pestis sugar transport system permease ypo3963 or y3866 SWALL:Q8ZA55 (EMBL:AJ414160) (330 aa) fasta scores: E(): 2.3e-62, 60.67% id in 328 aa; sugar ABC transporter membrane protein 182928 3096664 BPSS0141 Burkholderia pseudomallei K96243 sugar ABC transporter membrane protein YP_110162.1 181894 R 272560 CDS YP_110163.1 53721178 3095596 complement(182971..184524) 1 NC_006351.1 Similar to Escherichia coli ribose transport ATP-binding protein RbsA or b3749 SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 1.2e-71, 45.4% id in 500 aa, and to Yersinia pestis sugar transport ATP-binding protein ypo3964 or y3865 SWALL:Q8ZA54 (EMBL:AJ414160) (507 aa) fasta scores: E(): 1.2e-90, 59.28% id in 501 aa; sugar ABC transporter ATP-binding protein 184524 3095596 BPSS0142 Burkholderia pseudomallei K96243 sugar ABC transporter ATP-binding protein YP_110163.1 182971 R 272560 CDS YP_110164.1 53721179 3095597 complement(184511..185761) 1 NC_006351.1 Similar to Rhizobium meliloti transcription regulator protein r00475 or smc02172 SWALL:Q92SC9 (EMBL:AL591783) (409 aa) fasta scores: E(): 1.3e-34, 33.42% id in 386 aa, and to Agrobacterium tumefaciens transcriptional regulator, ROK family atu4655 or agr_l_455 SWALL:Q8U701 (EMBL:AE009394) (429 aa) fasta scores: E(): 2.9e-28, 31.93% id in 404 aa; transcriptional regulator 185761 3095597 BPSS0143 Burkholderia pseudomallei K96243 transcriptional regulator YP_110164.1 184511 R 272560 CDS YP_110165.1 53721180 3096596 complement(186668..189283) 1 NC_006351.1 N-terminal region similar to Clostridium sp. glucoamylase precursor Cga SWALL:AMYG_CLOSP (SWALL:P29761) (702 aa) fasta scores: E(): 8.9e-20, 37.14% id in 743 aa, and C-terminal end to Streptomyces violaceus alpha-amylase precursor Aml SWALL:AMY_STRVL (SWALL:P22998) (569 aa) fasta scores: E(): 7.5e-13, 37.8% id in 164 aa; amylase 189283 3096596 BPSS0144 Burkholderia pseudomallei K96243 amylase YP_110165.1 186668 R 272560 CDS YP_110166.1 53721181 3096710 complement(190115..191512) 1 NC_006351.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 191512 dbpA 3096710 dbpA Burkholderia pseudomallei K96243 ATP-dependent RNA helicase DbpA YP_110166.1 190115 R 272560 CDS YP_110167.1 53721182 3096811 complement(191677..192306) 1 NC_006351.1 Similar to the C-terminal region of Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 2.3e-23, 38.64% id in 207 aa, and of Acinetobacter lwoffii hypothetical 36.5 kDa protein SWALL:Q934S0 (EMBL:U77658) (344 aa) fasta scores: E(): 1e-06, 26.22% id in 225 aa; hypothetical protein 192306 3096811 BPSS0146 Burkholderia pseudomallei K96243 hypothetical protein YP_110167.1 191677 R 272560 CDS YP_110168.1 53721183 3096812 complement(192341..193654) 1 NC_006351.1 Similar to Klebsiella pneumoniae citrate-proton symporter CitH or Cit SWALL:CIT1_KLEPN (SWALL:P16482) (444 aa) fasta scores: E(): 4.8e-44, 37.05% id in 421 aa, and to the plasmid borne Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 3.7e-41, 35.84% id in 399 aa; transporter protein 193654 3096812 BPSS0147 Burkholderia pseudomallei K96243 transporter protein YP_110168.1 192341 R 272560 CDS YP_110169.1 53721184 3096644 complement(193695..194885) 1 NC_006351.1 Similar to Campylobacter jejuni hippurate hydrolase HipO or cj0985C SWALL:HIPO_CAMJE (SWALL:P45493) (383 aa) fasta scores: E(): 2.3e-64, 47.53% id in 385 aa, and to Pseudomonas aeruginosa probable hydrolase pa4344 SWALL:Q9HW57 (EMBL:AE004850) (406 aa) fasta scores: E(): 1.3e-86, 59.17% id in 387 aa; hypothetical protein 194885 3096644 BPSS0148 Burkholderia pseudomallei K96243 hypothetical protein YP_110169.1 193695 R 272560 CDS YP_110170.1 53721185 3095854 195065..195967 1 NC_006351.1 Similar to Comamonas testosteroni TsaR SWALL:P94678 (EMBL:U32622) (298 aa) fasta scores: E(): 2.3e-35, 37.79% id in 299 aa, and to Escherichia coli transcriptional regulator AbgR or b1339 SWALL:ABGR_ECOLI (SWALL:P77744) (302 aa) fasta scores: E(): 7e-28, 32.64% id in 291 aa; LysR family transcriptional regulator 195967 3095854 BPSS0149 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110170.1 195065 D 272560 CDS YP_110171.1 53721186 3095855 complement(196307..197116) 1 NC_006351.1 Low similarity to Pseudomonas aeruginosa hypothetical protein pa5101 SWALL:Q9HU82 (EMBL:AE004923) (265 aa) fasta scores: E(): 5.2e-20, 36.07% id in 219 aa, and to Rhizobium loti hypothetical protein mll1215 SWALL:Q98L21 (EMBL:AP002996) (275 aa) fasta scores: E(): 2.2e-08, 34.57% id in 214 aa; hypothetical protein 197116 3095855 BPSS0150 Burkholderia pseudomallei K96243 hypothetical protein YP_110171.1 196307 R 272560 CDS YP_110172.1 53721187 3096555 197293..198459 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5102 SWALL:Q9HU81 (EMBL:AE004923) (312 aa) fasta scores: E(): 1.8e-58, 49.21% id in 317 aa, and to Burkholderia cepacia omega-3 fatty acid desaturase SWALL:Q9ZGQ3 (EMBL:AF076477) (334 aa) fasta scores: E(): 8.2e-05, 28.78% id in 264 aa. Note: CDS is longer in its N-terminal region than most of its database matches, possible alternative start codon at residue 51; desaturase 198459 3096555 BPSS0151 Burkholderia pseudomallei K96243 desaturase YP_110172.1 197293 D 272560 CDS YP_110173.1 53721188 3095697 198951..199391 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane protein rsc3150 or rs00450 SWALL:Q8XUN7 (EMBL:AL646073) (143 aa) fasta scores: E(): 3e-25, 72.26% id in 137 aa, and to Pseudomonas aeruginosa hypothetical protein pa5183 SWALL:Q9HU06 (EMBL:AE004931) (135 aa) fasta scores: E(): 2.7e-13, 47.94% id in 146 aa; hypothetical protein 199391 3095697 BPSS0152 Burkholderia pseudomallei K96243 hypothetical protein YP_110173.1 198951 D 272560 CDS YP_110174.1 53721189 3096477 complement(199973..200872) 1 NC_006351.1 Similar to Escherichia coli glutamate/aspartate periplasmic binding protein precursor GltI or b0655 SWALL:GLTI_ECOLI (SWALL:P37902) (302 aa) fasta scores: E(): 1.8e-60, 55% id in 300 aa, and to Ralstonia solanacearum probable amino-acid-binding periplasmic rsc0481 or rs04394 SWALL:Q8Y255 (EMBL:AL646059) (313 aa) fasta scores: E(): 1.8e-64, 59.37% id in 288 aa; glutamate/aspartate periplasmic binding protein precursor 200872 gltI 3096477 gltI Burkholderia pseudomallei K96243 glutamate/aspartate periplasmic binding protein precursor YP_110174.1 199973 R 272560 CDS YP_110175.1 53721190 3096536 complement(201036..202283) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 D-amino acid dehydrogenase small subunit DadA or DadR or b1189 or c1638 or z1952 or ecs1684 SWALL:DADA_ECOLI (SWALL:P29011) (432 aa) fasta scores: E(): 5.6e-51, 37.85% id in 420 aa, and to Pseudomonas aeruginosa D-amino acid dehydrogenase 2 small subunit pa5084 SWALL:DAD2_PSEAE (SWALL:Q9HU99) (416 aa) fasta scores: E(): 1e-68, 51.44% id in 414 aa; D-amino acid dehydrogenase small subunit 202283 dadA 3096536 dadA Burkholderia pseudomallei K96243 D-amino acid dehydrogenase small subunit YP_110175.1 201036 R 272560 CDS YP_110176.1 53721191 3095698 complement(202436..203368) 1 NC_006351.1 Similar to Escherichia coli transcriptional activator protein LysR or b2839 SWALL:LYSR_ECOLI (SWALL:P03030) (311 aa) fasta scores: E(): 1.7e-16, 34.95% id in 246 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5085 SWALL:Q9HU98 (EMBL:AE004921) (318 aa) fasta scores: E(): 1.7e-30, 41.58% id in 291 aa; LysR family transcriptional regulator 203368 3095698 BPSS0155 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110176.1 202436 R 272560 CDS YP_110177.1 53721192 3096420 complement(203913..204674) 1 NC_006351.1 Similar to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase rsc1029 or rs04221 SWALL:Q8Y0L4 (EMBL:AL646062) (246 aa) fasta scores: E(): 6.8e-24, 39.5% id in 243 aa, and to Bacillus cereus benzil reductase YueD SWALL:Q8RJ14 (EMBL:AB052927) (249 aa) fasta scores: E(): 1.8e-19, 34.04% id in 235 aa; short chain dehydrogenase 204674 3096420 BPSS0156 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_110177.1 203913 R 272560 CDS YP_110178.1 53721193 3096326 205043..205462 1 NC_006351.1 hypothetical protein 205462 3096326 BPSS0157 Burkholderia pseudomallei K96243 hypothetical protein YP_110178.1 205043 D 272560 CDS YP_110179.1 53721194 3096327 205904..207820 1 NC_006351.1 Very low similarity to Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 1.3e-16, 30.72% id in 677 aa, and in its C-terminal region to Anabaena sp. hypothetical protein all3696 SWALL:Q8YQW5 (EMBL:AP003594) (379 aa) fasta scores: E(): 2.1e-06, 27.71% id in 368 aa; hypothetical protein 207820 3096327 BPSS0158 Burkholderia pseudomallei K96243 hypothetical protein YP_110179.1 205904 D 272560 CDS YP_110180.1 53721195 3095945 208096..210993 1 NC_006351.1 Similar to Xanthomonas campestris hypothetical protein xcc2894 SWALL:Q8P6S1 (EMBL:AE012403) (781 aa) fasta scores: E(): 2.6e-40, 34.17% id in 793 aa, and to Mycobacterium tuberculosis hypothetical protein rv0584 or mt0612 or mtv039.22 SWALL:O86365 (EMBL:AL021942) (877 aa) fasta scores: E(): 4.7e-37, 38.47% id in 850 aa; hypothetical protein 210993 3095945 BPSS0159 Burkholderia pseudomallei K96243 hypothetical protein YP_110180.1 208096 D 272560 CDS YP_110181.1 53721196 3096465 211595..212653 1 NC_006351.1 Similar to Pseudomonas aeruginosa pyoverdine biosynthesis protein PvcA or pa2254 SWALL:Q9I1L5 (EMBL:AE004651) (328 aa) fasta scores: E(): 1.5e-74, 61.16% id in 309 aa, and to the N-terminal region of Vibrio cholerae PvcA protein vc1949 SWALL:Q9KQP9 (EMBL:AE004270) (608 aa) fasta scores: E(): 1.3e-13, 30.45% id in 243 aa; siderophore biosynthesis-related protein 212653 3096465 BPSS0160 Burkholderia pseudomallei K96243 siderophore biosynthesis-related protein YP_110181.1 211595 D 272560 CDS YP_110182.1 53721197 3096466 212650..213564 1 NC_006351.1 Similar to Pseudomonas aeruginosa pyoverdine biosynthesis protein PvcB or pa2255 SWALL:Q9I1L4 (EMBL:AE004651) (291 aa) fasta scores: E(): 4.4e-76, 61.03% id in 290 aa, and to Vibrio cholerae PvcB protein vc1944 SWALL:Q9KQQ4 (EMBL:AE004270) (287 aa) fasta scores: E(): 1.1e-54, 48.86% id in 264 aa; siderophore biosynthesis-related protein 213564 3096466 BPSS0161 Burkholderia pseudomallei K96243 siderophore biosynthesis-related protein YP_110182.1 212650 D 272560 CDS YP_110183.1 53721198 3096493 213569..215074 1 NC_006351.1 Similar to Pseudomonas aeruginosa pyoverdin chromophore biosynthetic protein PvcC or pa2256 SWALL:PVCC_PSEAE (SWALL:O30372) (500 aa) fasta scores: E(): 2.2e-156, 76.17% id in 491 aa, and to Escherichia coli 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component HpaB SWALL:HPAB_ECOLI (SWALL:Q57160) (520 aa) fasta scores: E(): 2.5e-81, 43.84% id in 504 aa; siderophore biosynthesis-related protein 215074 3096493 BPSS0162 Burkholderia pseudomallei K96243 siderophore biosynthesis-related protein YP_110183.1 213569 D 272560 CDS YP_110184.1 53721199 3096020 215120..216988 1 NC_006351.1 Similar to Bacillus subtilis asparagine synthetase [glutamine-hydrolyzing] 3 AsnO SWALL:ASNO_BACSU (SWALL:O05272) (614 aa) fasta scores: E(): 1.6e-68, 42.01% id in 626 aa, and to Streptomyces aureofaciens asparagine synthase homolog TcsG SWALL:Q9FAR2 (EMBL:AB039379) (609 aa) fasta scores: E(): 2.6e-128, 54.76% id in 619 aa; asparagine synthase 216988 asnO 3096020 asnO Burkholderia pseudomallei K96243 asparagine synthase YP_110184.1 215120 D 272560 CDS YP_110185.1 53721200 3096415 217017..217988 1 NC_006351.1 Similar to Mycobacterium tuberculosis quinone oxidoreductase rv1454c or mt1501 or mtv007.01C SWALL:O53146 (EMBL:AL021184) (335 aa) fasta scores: E(): 2.6e-54, 54.1% id in 329 aa, and to Pseudomonas aeruginosa quinone oxidoreductase Qor or pa0023 SWALL:QOR_PSEAE (SWALL:P43903) (325 aa) fasta scores: E(): 3.4e-42, 46.27% id in 322 aa; quinone oxidoreductase 217988 3096415 BPSS0164 Burkholderia pseudomallei K96243 quinone oxidoreductase YP_110185.1 217017 D 272560 CDS YP_110186.1 53721201 3096416 218043..218969 1 NC_006351.1 Similar to Salmonella typhi 3,4-dihydroxyphenylacetate 2,3-dioxygenase sty1137 SWALL:Q8Z7Q1 (EMBL:AL627269) (283 aa) fasta scores: E(): 6.7e-18, 29.21% id in 291 aa, and to Escherichia coli 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpcB SWALL:HPCB_ECOLI (SWALL:Q05353) (275 aa) fasta scores: E(): 4.2e-16, 28.95% id in 259 aa; dioxygenase 218969 3096416 BPSS0165 Burkholderia pseudomallei K96243 dioxygenase YP_110186.1 218043 D 272560 CDS YP_110187.1 53721202 3096735 complement(219213..220175) 1 NC_006351.1 Similar to Pseudomonas aeruginosa transcriptional regulator for exotoxin A production PtxR or pa2258 SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 1.3e-42, 42.06% id in 290 aa, and to Salmonella typhi possible LysR-family transcriptional regulator sty3037 SWALL:Q8Z482 (EMBL:AL627276) (310 aa) fasta scores: E(): 4.1e-25, 30.84% id in 308 aa; LysR family transcriptional regulator 220175 3096735 BPSS0166 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110187.1 219213 R 272560 CDS YP_110188.1 53721203 3096619 complement(221397..225473) 1 NC_006351.1 Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciS protein precursor SWALL:Q93IR7 (EMBL:AJ320483) (1289 aa) fasta scores: E(): 2.4e-141, 45.3% id in 1351 aa, and to Yersinia pestis membrane protein ypo2724 SWALL:Q8ZD68 (EMBL:AJ414153) (1275 aa) fasta scores: E(): 3.4e-48, 29.77% id in 1360 aa. Note: The amino acid residues between approx. position 255 and position 320 present no similarities to the database matches. Also similar to BPSS0103 (1303 aa) fasta scores: E(): 5.1e-92, 47.210% identity in 1362 aa overlap; hypothetical protein 225473 3096619 BPSS0167 Burkholderia pseudomallei K96243 hypothetical protein YP_110188.1 221397 R 272560 CDS YP_110189.1 53721204 3096620 complement(225502..226767) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium outer membrane protein, OmpA family stm0282 or SciP SWALL:Q93IS0 (EMBL:AE008707) (434 aa) fasta scores: E(): 6.7e-63, 48.33% id in 391 aa, and to Pseudomonas aeruginosa hypothetical protein pa0078 SWALL:Q9I754 (EMBL:AE004447) (449 aa) fasta scores: E(): 1.3e-22, 37.44% id in 414 aa. Note: Also similar to BPSS0102 (434 aa) fasta scores: E(): 2.1e-55, 46.283% identity in 417 aa overlap; hypothetical protein 226767 3096620 BPSS0168 Burkholderia pseudomallei K96243 hypothetical protein YP_110189.1 225502 R 272560 CDS YP_110190.1 53721205 3097178 complement(226856..228202) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0281 or SciO SWALL:Q93IS1 (EMBL:AE008707) (447 aa) fasta scores: E(): 4.3e-107, 59.73% id in 447 aa, and to Yersinia pestis hypothetical protein ypo2934 or y1549 SWALL:Q8ZCP3 (EMBL:AJ414154) (449 aa) fasta scores: E(): 3.6e-97, 55.05% id in 445 aa. Note: Also similar to BPSS0101 (453 aa) fasta scores: E(): 4.5e-106, 62.054% identity in 448 aa overlap; hypothetical protein 228202 3097178 BPSS0169 Burkholderia pseudomallei K96243 hypothetical protein YP_110190.1 226856 R 272560 CDS YP_110191.1 53721206 3096592 complement(228224..228736) 1 NC_006351.1 Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciN protein precursor SWALL:Q93IS2 (EMBL:AJ320483) (163 aa) fasta scores: E(): 2.9e-21, 46.25% id in 160 aa, and to Pseudomonas aeruginosa hypothetical protein pa1666 SWALL:Q9I359 (EMBL:AE004594) (168 aa) fasta scores: E(): 6.4e-13, 39.85% id in 138 aa. Note: Also similar to BPSS0100 (161 aa) fasta scores: E(): 2.9e-21, 45.860% identity in 157 aa overlap; lipoprotein 228736 3096592 BPSS0170 Burkholderia pseudomallei K96243 lipoprotein YP_110191.1 228224 R 272560 CDS YP_110192.1 53721207 3096593 complement(228834..229319) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0279 or SciM SWALL:Q93IS3 (EMBL:AE008707) (161 aa) fasta scores: E(): 2.9e-42, 68.12% id in 160 aa, and to Yersinia pestis hypothetical protein ypo2937 SWALL:Q8ZCP1 (EMBL:AJ414154) (161 aa) fasta scores: E(): 8.8e-37, 57.59% id in 158 aa. Note: Also similar to BPSS0099 (161 aa) fasta scores: E(): 4.1e-42, 66.456% identity in 158 aa overlap; hypothetical protein 229319 3096593 BPSS0171 Burkholderia pseudomallei K96243 hypothetical protein YP_110192.1 228834 R 272560 CDS YP_110193.1 53721208 3094961 complement(229436..230935) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo2938 SWALL:Q8ZCP0 (EMBL:AJ414154) (500 aa) fasta scores: E(): 9.3e-166, 80.2% id in 500 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciI protein SWALL:Q93IS7 (EMBL:AJ320483) (497 aa) fasta scores: E(): 4.6e-161, 78.49% id in 493 aa. Note: Also similar to BPSS0098 (500 aa) fasta scores: E(): 5.9e-182, 84.168% identity in 499 aa overlap; hypothetical protein 230935 3094961 BPSS0172 Burkholderia pseudomallei K96243 hypothetical protein YP_110193.1 229436 R 272560 CDS YP_110194.1 53721209 3095382 complement(230970..231551) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo2939 SWALL:Q8ZCN9 (EMBL:AJ414154) (174 aa) fasta scores: E(): 1.8e-45, 78.31% id in 166 aa, and to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0273 or SciH SWALL:Q93IS8 (EMBL:AE008707) (180 aa) fasta scores: E(): 1.2e-44, 77.43% id in 164 aa. Note: This CDS is longer in its C-terminal region than most of its database matches and also similar to BPSS0097 (180 aa) fasta scores: E(): 4.5e-46, 81.818% identity in 165 aa overlap; hypothetical protein 231551 3095382 BPSS0173 Burkholderia pseudomallei K96243 hypothetical protein YP_110194.1 230970 R 272560 CDS YP_110195.1 53721210 3095383 complement(231587..234526) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium ATPase with chaperone activity stm0272 or sciG SWALL:Q93IS9 (EMBL:AE008707) (879 aa) fasta scores: E(): 1.4e-75, 58.54% id in 948 aa, and to Yersinia enterocolitica Clp protease-associated protein ClpB SWALL:Q9F746 (EMBL:AF285784) (890 aa) fasta scores: E(): 1.7e-69, 55.59% id in 939 aa. Note: Also similar to BPSS1502 (1013 aa) fasta scores: E(): 1.8e-94, 44.865% identity in 1003 aa overlap; chaperone 234526 3095383 BPSS0174 Burkholderia pseudomallei K96243 chaperone YP_110195.1 231587 R 272560 CDS YP_110196.1 53721211 3096077 235059..235778 1 NC_006351.1 hypothetical protein 235778 3096077 BPSS0175 Burkholderia pseudomallei K96243 hypothetical protein YP_110196.1 235059 D 272560 CDS YP_110197.1 53721212 3096401 235775..236740 1 NC_006351.1 Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciE protein SWALL:Q93IT1 (EMBL:AJ320483) (279 aa) fasta scores: E(): 6.8e-24, 38.69% id in 292 aa, and to Pseudomonas aeruginosa hypothetical protein pa0086 SWALL:Q9I746 (EMBL:AE004447) (281 aa) fasta scores: E(): 8.4e-23, 37.5% id in 272 aa. Note: Also similar to BPSS0114 (285 aa) fasta scores: E(): 7.9e-24, 39.590% identity in 293 aa overlap; hypothetical protein 236740 3096401 BPSS0176 Burkholderia pseudomallei K96243 hypothetical protein YP_110197.1 235775 D 272560 CDS YP_110198.1 53721213 3096402 236781..237308 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0269 or SciD SWALL:Q93IT2 (EMBL:AE008707) (164 aa) fasta scores: E(): 6.7e-24, 48.12% id in 160 aa, and to Yersinia pestis hypothetical protein ypo2728 or y1561 SWALL:Q8ZD64 (EMBL:AJ414153) (159 aa) fasta scores: E(): 3e-21, 38.71% id in 155 aa. Note: Also similar to BPSS0113 (173 aa) fasta scores: E(): 3.8e-25, 45.912% identity in 159 aa overlap; hypothetical protein 237308 3096402 BPSS0177 Burkholderia pseudomallei K96243 hypothetical protein YP_110198.1 236781 D 272560 CDS YP_110199.1 53721214 3096156 237339..239228 1 NC_006351.1 Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciC protein SWALL:Q93IT3 (EMBL:AJ320483) (627 aa) fasta scores: E(): 3.9e-156, 61.14% id in 628 aa, and to Yersinia pestis hypothetical protein ypo2947 or y1537 SWALL:Q8ZCN4 (EMBL:AJ414154) (626 aa) fasta scores: E(): 2.1e-143, 55.09% id in 628 aa. Note: Also similar to BPSS0112 (627 aa) fasta scores: E(): 1.2e-144, 63.796% identity in 627 aa overlap; hypothetical protein 239228 3096156 BPSS0178 Burkholderia pseudomallei K96243 hypothetical protein YP_110199.1 237339 D 272560 CDS YP_110200.1 53721215 3096542 239240..240313 1 NC_006351.1 Similar to Salmonella enterica subsp. enterica serovar Typhimurium SciB protein SWALL:Q93IT4 (EMBL:AJ320483) (291 aa) fasta scores: E(): 1.2e-65, 56.29% id in 286 aa, and to Yersinia pestis hypothetical protein ypo2948 SWALL:Q8ZCN3 (EMBL:AJ414154) (341 aa) fasta scores: E(): 1.2e-57, 47.02% id in 319 aa. Note: This CDS is longer in its N-terminal region than most of its database matches and it is also similar to BPSS0111 (350 aa) fasta scores: E(): 4.6e-66, 55.224% identity in 335 aa overlap; hypothetical protein 240313 3096542 BPSS0179 Burkholderia pseudomallei K96243 hypothetical protein YP_110200.1 239240 D 272560 CDS YP_110201.1 53721216 3096543 240310..241455 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0266 or SciA SWALL:Q93IT5 (EMBL:AE008707) (351 aa) fasta scores: E(): 1.7e-34, 45.33% id in 364 aa, and to Yersinia pestis hypothetical protein ypo2949 SWALL:Q8ZCN2 (EMBL:AJ414154) (393 aa) fasta scores: E(): 5.7e-20, 30.53% id in 393 aa. Note: Also similar to BPSS0110 (357 aa) fasta scores: E(): 1.3e-23, 44.101% identity in 356 aa overlap; hypothetical protein 241455 3096543 BPSS0180 Burkholderia pseudomallei K96243 hypothetical protein YP_110201.1 240310 D 272560 CDS YP_110202.1 53721217 3096254 241527..243854 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo2725 SWALL:Q8ZD67 (EMBL:AJ414153) (921 aa) fasta scores: E(): 4.7e-87, 45.51% id in 580 aa, and to Shigella flexneri Rhs-family protein sf0265 SWALL:AAN41925 (EMBL:AE015061) (737 aa) fasta scores: E(): 2.4e-74, 46.15% id in 546 aa; hypothetical protein 243854 3096254 BPSS0181 Burkholderia pseudomallei K96243 hypothetical protein YP_110202.1 241527 D 272560 CDS YP_110203.1 53721218 3096055 243886..246363 1 NC_006351.1 Similar in its full length to Yersinia pestis hypothetical y3665 SWALL:AAM87213 (EMBL:AE013969) (739 aa) fasta scores: E(): 6.7e-20, 24.39% id in 779 aa, C-terminal region to Yersinia pestis hypothetical protein ypo0509 SWALL:Q8ZII9 (EMBL:AJ414143) (540 aa) fasta scores: E(): 3.1e-09, 23.14% id in 566 aa, and N-terminal region to Rhizobium loti hypothetical protein mlr2351 SWALL:Q98IL3 (EMBL:AP002999) (367 aa) fasta scores: E(): 0.00016, 29.11% id in 261 aa; hypothetical protein 246363 3096055 BPSS0182 Burkholderia pseudomallei K96243 hypothetical protein YP_110203.1 243886 D 272560 CDS YP_110204.1 53721219 3096056 246360..247442 1 NC_006351.1 Similar to the C-terminal region of Anabaena sp. hypothetical protein all3114 SWALL:Q8YSH1 (EMBL:AP003591) (576 aa) fasta scores: E(): 3.3e-14, 26.19% id in 313 aa, and to the full length of Synechocystis sp. hypothetical protein sll1446 SWALL:P74206 (EMBL:D90913) (320 aa) fasta scores: E(): 6.2e-10, 24.76% id in 323 aa; hypothetical protein 247442 3096056 BPSS0183 Burkholderia pseudomallei K96243 hypothetical protein YP_110204.1 246360 D 272560 CDS YP_110205.1 53721220 3095906 247624..248283 1 NC_006351.1 hypothetical protein 248283 3095906 BPSS0184 Burkholderia pseudomallei K96243 hypothetical protein YP_110205.1 247624 D 272560 CDS YP_110206.1 53721221 3095746 248330..248704 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0511a or y3662 SWALL:Q8ZII6 (EMBL:AJ414143) (121 aa) fasta scores: E(): 2e-08, 40.17% id in 117 aa; hypothetical protein 248704 3095746 BPSS0185 Burkholderia pseudomallei K96243 hypothetical protein YP_110206.1 248330 D 272560 CDS YP_110207.1 53721222 3095747 complement(249406..251322) 1 NC_006351.1 Similar to Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 2.9e-14, 28.5% id in 684 aa, and in its C-terminal region to Anabaena sp. hypothetical protein all3696 SWALL:Q8YQW5 (EMBL:AP003594) (379 aa) fasta scores: E(): 3.3e-05, 28.8% id in 368 aa; hypothetical protein 251322 3095747 BPSS0186 Burkholderia pseudomallei K96243 hypothetical protein YP_110207.1 249406 R 272560 CDS YP_110208.1 53721223 3096255 complement(251662..252555) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1223 SWALL:Q9I4B5 (EMBL:AE004552) (297 aa) fasta scores: E(): 1.2e-82, 71.38% id in 297 aa, and to Rhizobium sp. SyrM protein homolog 1 SyrS1 or Y4pN SWALL:SYR1_RHISN (SWALL:P55619) (338 aa) fasta scores: E(): 3e-30, 39.46% id in 299 aa; LysR family transcriptional regulator 252555 3096255 BPSS0187 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110208.1 251662 R 272560 CDS YP_110209.1 53721224 3095845 252651..253427 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable NAD(P)H deydrogenase pa1224 SWALL:Q9I4B4 (EMBL:AE004552) (259 aa) fasta scores: E(): 3.3e-82, 72.48% id in 258 aa, and to Rhizobium meliloti NADPH dehydrogenase quinone reductase transmembrane protein r02916 or smc03185 SWALL:Q92LV5 (EMBL:AL591792) (270 aa) fasta scores: E(): 4.7e-65, 58.52% id in 258 aa; dehydrogenase 253427 3095845 BPSS0188 Burkholderia pseudomallei K96243 dehydrogenase YP_110209.1 252651 D 272560 CDS YP_110210.1 53721225 3096143 complement(254427..255722) 1 NC_006351.1 Similar to Bacillus halodurans O-acetylhomoserine sulfhydrylase bh2603 SWALL:Q9K9P2 (EMBL:AP001516) (430 aa) fasta scores: E(): 7.2e-95, 60.71% id in 420 aa, and to the full length of the eukaryotic Emericella nidulans O-acetylhomoserine CysD SWALL:CYSD_EMENI (SWALL:P50125) (437 aa) fasta scores: E(): 1.6e-83, 51.16% id in 430 aa; O-acetylhomoserine 255722 3096143 BPSS0190 Burkholderia pseudomallei K96243 O-acetylhomoserine YP_110210.1 254427 R 272560 CDS YP_110211.1 53721226 3096446 complement(256006..256398) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc2017 or rs03585 SWALL:Q8XXU6 (EMBL:AL646067) (134 aa) fasta scores: E(): 3.9e-05, 33.61% id in 119 aa, and to Caulobacter crescentus hypothetical protein cc2962 SWALL:Q9A481 (EMBL:AE005960) (121 aa) fasta scores: E(): 4.2e-05, 30.64% id in 124 aa; dioxygenase 256398 3096446 BPSS0191 Burkholderia pseudomallei K96243 dioxygenase YP_110211.1 256006 R 272560 CDS YP_110212.1 53721227 3096447 complement(256752..257597) 1 NC_006351.1 hypothetical protein 257597 3096447 BPSS0192 Burkholderia pseudomallei K96243 hypothetical protein YP_110212.1 256752 R 272560 CDS YP_110213.1 53721228 3096290 complement(258412..259767) 1 NC_006351.1 hypothetical protein 259767 3096290 BPSS0193 Burkholderia pseudomallei K96243 hypothetical protein YP_110213.1 258412 R 272560 CDS YP_110214.1 53721229 3095785 complement(259954..260958) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0496 SWALL:Q9I622 (EMBL:AE004486) (325 aa) fasta scores: E(): 4.1e-81, 65.2% id in 319 aa, and similar to parts of Pseudomonas fluorescens urea amidolyase homologue UahA SWALL:Q9XAV3 (EMBL:AJ243652) (1213 aa) fasta scores: E(): 2.4e-34, 42.76% id in 311 aa; hypothetical protein 260958 3095785 BPSS0194 Burkholderia pseudomallei K96243 hypothetical protein YP_110214.1 259954 R 272560 CDS YP_110215.1 53721230 3095786 complement(260948..261823) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0495 SWALL:Q9I623 (EMBL:AE004486) (292 aa) fasta scores: E(): 5.2e-84, 69.55% id in 289 aa, and to parts of Pseudomonas fluorescens urea amidolyase homologue UahA SWALL:Q9XAV3 (EMBL:AJ243652) (1213 aa) fasta scores: E(): 4.9e-13, 26.18% id in 275 aa; hypothetical protein 261823 3095786 BPSS0195 Burkholderia pseudomallei K96243 hypothetical protein YP_110215.1 260948 R 272560 CDS YP_110216.1 53721231 3095233 complement(261820..263265) 1 NC_006351.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 263265 accC 3095233 accC Burkholderia pseudomallei K96243 acetyl-CoA carboxylase biotin carboxylase subunit YP_110216.1 261820 R 272560 CDS YP_110217.1 53721232 3096135 complement(263271..263537) 1 NC_006351.1 Catalyzes the formation of malnoyl-CoA, which in turn controls the rate of fatty acid metabolism; hypothetical protein 263537 3096135 BPSS0197 Burkholderia pseudomallei K96243 hypothetical protein YP_110217.1 263271 R 272560 CDS YP_110218.1 53721233 3096371 complement(263527..264327) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0492 SWALL:Q9I626 (EMBL:AE004486) (252 aa) fasta scores: E(): 7.9e-69, 72.58% id in 248 aa, and to Escherichia coli protein YbgL or b0713 SWALL:YBGL_ECOLI (SWALL:P75746) (244 aa) fasta scores: E(): 8.5e-28, 38.55% id in 249 aa; hypothetical protein 264327 3096371 BPSS0198 Burkholderia pseudomallei K96243 hypothetical protein YP_110218.1 263527 R 272560 CDS YP_110219.1 53721234 3096372 264595..265509 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hydrogen peroxide-inducible genes activator OxyR or MomR or Mor or b3961 or c4922 or z5519 or ecs4890 SWALL:OXYR_ECOLI (SWALL:P11721) (305 aa) fasta scores: E(): 1.2e-18, 30.5% id in 295 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0491 SWALL:Q9I627 (EMBL:AE004486) (308 aa) fasta scores: E(): 1.8e-73, 64.21% id in 299 aa; LysR family transcriptional regulator 265509 3096372 BPSS0199 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110219.1 264595 D 272560 CDS YP_110220.1 53721235 3095645 266228..268741 1 NC_006351.1 Similar to Brucella abortus penicillin acylase II batn1953.orf25 SWALL:Q8VQK2 (EMBL:AF454951) (761 aa) fasta scores: E(): 6e-37, 29.86% id in 817 aa, and to Arthrobacter viscosus penicillin G acylase precursor Pac or Pa SWALL:PAC_ARTVI (SWALL:P31956) (802 aa) fasta scores: E(): 1.3e-33, 27.75% id in 544 aa; penicillin amidase 268741 3095645 BPSS0200 Burkholderia pseudomallei K96243 penicillin amidase YP_110220.1 266228 D 272560 CDS YP_110221.1 53721236 3095394 269128..270066 1 NC_006351.1 Similar to Serratia marcescens proline iminopeptidase Pip SWALL:PIP_SERMA (SWALL:O32449) (317 aa) fasta scores: E(): 4.7e-86, 66.77% id in 310 aa, and to Ralstonia solanacearum probable prolyl aminopeptidase rsp0196 or rs04709 SWALL:Q8XTB7 (EMBL:AL646077) (320 aa) fasta scores: E(): 4.9e-88, 68.6% id in 309 aa; prolyl iminopeptidase 270066 pip 3095394 pip Burkholderia pseudomallei K96243 prolyl iminopeptidase YP_110221.1 269128 D 272560 CDS YP_110222.1 53721237 3096621 270241..271134 1 NC_006351.1 Very low similarities to parts of Mycobacterium tuberculosis hypothetical 37.9 kDa protein rv1523 or mt1574 or mtcy19g5.05C SWALL:Q50584 (EMBL:Z77826) (347 aa) fasta scores: E(): 9.2e-06, 35.03% id in 137 aa, and to Pseudomonas aeruginosa hypothetical protein pa2650 SWALL:Q9I0I8 (EMBL:AE004694) (269 aa) fasta scores: E(): 5.8e-05, 34.07% id in 135 aa; hypothetical protein 271134 3096621 BPSS0202 Burkholderia pseudomallei K96243 hypothetical protein YP_110222.1 270241 D 272560 CDS YP_110223.1 53721238 3096622 complement(271227..273239) 1 NC_006351.1 lipoprotein 273239 3096622 BPSS0203 Burkholderia pseudomallei K96243 lipoprotein YP_110223.1 271227 R 272560 CDS YP_110224.1 53721239 3095098 complement(274149..275777) 1 NC_006351.1 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 7.7e-55, 47.52% id in 484 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis transmembrane protein rsc1234 or rs02741 SWALL:Q8Y011 (EMBL:AL646063) (514 aa) fasta scores: E(): 1.4e-100, 65.1% id in 513 aa; methyl-accepting chemotaxis protein I 275777 tsr 3095098 tsr Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein I YP_110224.1 274149 R 272560 CDS YP_110225.1 53721240 3095843 complement(276127..278211) 1 NC_006351.1 Similar to Burkholderia sacchari PrpR SWALL:Q8VPT1 (EMBL:AY033092) (646 aa) fasta scores: E(): 3.9e-121, 60.78% id in 663 aa, and to Escherichia coli propionate catabolism operon regulatory protein PrpR or b0330 SWALL:PRPR_ECOLI (SWALL:P77743) (528 aa) fasta scores: E(): 3e-41, 36.99% id in 673 aa. CDS is extended at the C-terminus in comparison to orthologues; sigma interaction transcriptional regulator 278211 prpR 3095843 prpR Burkholderia pseudomallei K96243 sigma interaction transcriptional regulator YP_110225.1 276127 R 272560 CDS YP_110226.1 53721241 3095582 278428..279321 1 NC_006351.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 279321 prpB 3095582 prpB Burkholderia pseudomallei K96243 2-methylisocitrate lyase YP_110226.1 278428 D 272560 CDS YP_110227.1 53721242 3095583 279370..280542 1 NC_006351.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 280542 prpC 3095583 prpC Burkholderia pseudomallei K96243 methylcitrate synthase YP_110227.1 279370 D 272560 CDS YP_110228.1 53721243 3095728 280616..283210 1 NC_006351.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 283210 acnA 3095728 acnA Burkholderia pseudomallei K96243 aconitate hydratase YP_110228.1 280616 D 272560 CDS YP_110229.1 53721244 3096880 283368..284558 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp0119 or rs03003 SWALL:Q8XTI9 (EMBL:AL646076) (396 aa) fasta scores: E(): 2.8e-129, 88.07% id in 394 aa, and to Burkholderia sacchari hypothetical 41.4 kDa protein SWALL:Q8VPS6 (EMBL:AY033092) (396 aa) fasta scores: E(): 4.9e-128, 86.36% id in 396 aa; hypothetical protein 284558 3096880 BPSS0209 Burkholderia pseudomallei K96243 hypothetical protein YP_110229.1 283368 D 272560 CDS YP_110230.1 53721245 3095993 complement(284611..285054) 1 NC_006351.1 Similar to Deinococcus radiodurans hypothetical protein dra0198 SWALL:Q9RYV8 (EMBL:AE001862) (164 aa) fasta scores: E(): 7.4e-21, 45.73% id in 129 aa, and to Rhizobium loti hypothetical protein mlr6946 SWALL:Q987R7 (EMBL:AP003010) (171 aa) fasta scores: E(): 1.4e-06, 32.39% id in 142 aa; hypothetical protein 285054 3095993 BPSS0210 Burkholderia pseudomallei K96243 hypothetical protein YP_110230.1 284611 R 272560 CDS YP_110231.1 53721246 3095994 286130..286321 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1725 or rs02913 SWALL:Q8XYN3 (EMBL:AL646066) (63 aa) fasta scores: E(): 2.2e-08, 62.26% id in 53 aa, and to the C-terminal region of Ralstonia solanacearum hypothetical protein rsc1727 or rs02915 SWALL:Q8XYN1 (EMBL:AL646066) (193 aa) fasta scores: E(): 0.00076, 45.9% id in 61 aa; hypothetical protein 286321 3095994 BPSS0211 Burkholderia pseudomallei K96243 hypothetical protein YP_110231.1 286130 D 272560 CDS YP_110232.1 53721247 3096247 286414..287052 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1726 or rs02914 SWALL:Q8XYN2 (EMBL:AL646066) (208 aa) fasta scores: E(): 6.3e-40, 54.71% id in 212 aa, and to Ralstonia solanacearum hypothetical protein rsc1727 or rs02915 SWALL:Q8XYN1 (EMBL:AL646066) (193 aa) fasta scores: E(): 3.2e-13, 39.61% id in 207 aa; hypothetical protein 287052 3096247 BPSS0212 Burkholderia pseudomallei K96243 hypothetical protein YP_110232.1 286414 D 272560 CDS YP_110233.1 53721248 3096906 287105..287695 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1727 or rs02915 SWALL:Q8XYN1 (EMBL:AL646066) (193 aa) fasta scores: E(): 2.1e-33, 51.79% id in 195 aa, and to Ralstonia solanacearum hypothetical protein rsc1726 or rs02914 SWALL:Q8XYN2 (EMBL:AL646066) (208 aa) fasta scores: E(): 1.3e-12, 36.94% id in 203 aa; hypothetical protein 287695 3096906 BPSS0213 Burkholderia pseudomallei K96243 hypothetical protein YP_110233.1 287105 D 272560 CDS YP_110234.1 53721249 3096907 287774..289249 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1728 or rs02916 SWALL:Q8XYN0 (EMBL:AL646066) (491 aa) fasta scores: E(): 3.8e-168, 84.45% id in 489 aa, and to Pyrobaculum aerophilum metallo cofactor biosynthesis protein pae0579 SWALL:Q8ZYW8 (EMBL:AE009774) (384 aa) fasta scores: E(): 1.7e-19, 28.45% id in 369 aa; heme/metallo cofactor biosynthesis-like protein 289249 3096907 BPSS0214 Burkholderia pseudomallei K96243 heme/metallo cofactor biosynthesis-like protein YP_110234.1 287774 D 272560 CDS YP_110235.1 53721250 3096604 289471..291084 1 NC_006351.1 Similar to Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or CheM or stm1919 SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 9.9e-67, 47.81% id in 525 aa, and to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 4e-63, 44.93% id in 523 aa; methyl-accepting chemotaxis protein 291084 tar 3096604 tar Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_110235.1 289471 D 272560 CDS YP_110236.1 53721251 3096037 complement(291447..293084) 1 NC_006351.1 Similar to Rhizobium loti transmembrane efflux protein mll5686 SWALL:Q98B85 (EMBL:AP003007) (502 aa) fasta scores: E(): 3.1e-40, 32.99% id in 491 aa, and to Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA SWALL:TCMA_STRGA (SWALL:P39886) (538 aa) fasta scores: E(): 1.7e-37, 31.08% id in 518 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 293084 3096037 BPSS0216 Burkholderia pseudomallei K96243 hypothetical protein YP_110236.1 291447 R 272560 CDS YP_110237.1 53721252 3096243 293213..294070 1 NC_006351.1 Similar to Agrobacterium tumefaciens transcriptional regulator, LysR family atu4021 or agr_l_1663 SWALL:Q8U8R9 (EMBL:AE009333) (309 aa) fasta scores: E(): 2.6e-32, 37.2% id in 293 aa, and to Yersinia pestis probable LysR-family transcriptional regulator ypo1929 SWALL:Q8ZF22 (EMBL:AJ414150) (292 aa) fasta scores: E(): 1.6e-23, 31.59% id in 288 aa; LysR family transcriptional regulator 294070 3096243 BPSS0217 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110237.1 293213 D 272560 CDS YP_110238.1 53721253 3096244 complement(294153..295256) 1 NC_006351.1 Similar to Ralstonia solanacearum probable mannose-6-phosphate isomerase ManA or rsc3058 or rs00502 SWALL:Q8XUX5 (EMBL:AL646073) (410 aa) fasta scores: E(): 1.6e-39, 43.22% id in 391 aa, and to Rhizobium meliloti mannose-6-phosphate isomerase Pmi or r02982 or smc03111 SWALL:MANA_RHIME (SWALL:P29954) (387 aa) fasta scores: E(): 9.4e-06, 28.75% id in 386 aa; isomerase 295256 3096244 BPSS0218 Burkholderia pseudomallei K96243 isomerase YP_110238.1 294153 R 272560 CDS YP_110239.1 53721254 3096098 295367..296062 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YhiD or b3508 or z4920 or ecs4388 SWALL:YHID_ECOLI (SWALL:P26606) (215 aa) fasta scores: E(): 1.1e-24, 40.55% id in 217 aa, and to Aquifex aeolicus Mg(2+) transport ATPase MgtC or aq_447 SWALL:O66755 (EMBL:AE000690) (225 aa) fasta scores: E(): 6.8e-20, 39.3% id in 201 aa; MgtC family membrane protein 296062 3096098 BPSS0219 Burkholderia pseudomallei K96243 MgtC family membrane protein YP_110239.1 295367 D 272560 CDS YP_110240.1 53721255 3096180 296382..297662 1 NC_006351.1 No significant database matches. Possible alternative translational start site; hypothetical protein 297662 3096180 BPSS0220 Burkholderia pseudomallei K96243 hypothetical protein YP_110240.1 296382 D 272560 CDS YP_110241.1 53721256 3096181 complement(297814..298842) 1 NC_006351.1 Doubtful CDS. Poor database matches. Weakly similar to the N-terminal region of Mycobacterium paratuberculosis FtsQ ftsQ SWALL:Q73YR0 (EMBL:AE017233) (375 aa) fasta scores: E(): 0.00018, 31.51% id in 330 aa; hypothetical protein 298842 3096181 BPSS0221A Burkholderia pseudomallei K96243 hypothetical protein YP_110241.1 297814 R 272560 CDS YP_110242.1 53721257 3097175 299030..299500 1 NC_006351.1 Similar to Listeria monocytogenes hypothetical protein lmo0624 SWALL:Q8Y9A8 (EMBL:AL591976) (147 aa) fasta scores: E(): 2.4e-12, 32.43% id in 148 aa, and to Bacillus subtilis YycN protein SWALL:O32293 (EMBL:Z99124) (156 aa) fasta scores: E(): 1.9e-11, 30.71% id in 153 aa; acetyltransferase 299500 3097175 BPSS0222 Burkholderia pseudomallei K96243 acetyltransferase YP_110242.1 299030 D 272560 CDS YP_110243.1 53721258 3096389 complement(299703..300371) 1 NC_006351.1 hypothetical protein 300371 3096389 BPSS0223 Burkholderia pseudomallei K96243 hypothetical protein YP_110243.1 299703 R 272560 CDS YP_110244.1 53721259 3096390 complement(300572..303502) 1 NC_006351.1 No significant database matches to the full length CDS. N-terminal region is similar to Similar to Homo sapiens copper-transporting ATPase 2 ATP7B or WND or PWD or WC1 SWALL:AT7B_HUMAN (SWALL:P35670) (1465 aa) fasta scores: E(): 3e-07, 27% id in 300 aa. C-terminal region is similar to Ralstonia solanacearum probable cation-transporting ATPase transmembrane protein rsc3348 or rs02623 SWALL:Q8XU45 (EMBL:AL646074) (748 aa) fasta scores: E(): 1.1e-121, 59.89% id in 768 aa, and to Synechocystis sp. cation-transporting ATPase PacS or sll1920 SWALL:ATCS_SYNY3 (SWALL:P73241) (745 aa) fasta scores: E(): 2.8e-81, 44.01% id in 777 aa; cation-transporting ATPase membrane protein 303502 3096390 BPSS0224 Burkholderia pseudomallei K96243 cation-transporting ATPase membrane protein YP_110244.1 300572 R 272560 CDS YP_110245.1 53721260 3096836 304350..305177 1 NC_006351.1 hypothetical protein 305177 3096836 BPSS0225 Burkholderia pseudomallei K96243 hypothetical protein YP_110245.1 304350 D 272560 CDS YP_110246.1 53721261 3096089 305951..307372 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0254 or rs00689 SWALL:Q8Y2T1 (EMBL:AL646058) (542 aa) fasta scores: E(): 1.1e-24, 34.67% id in 522 aa, and to Listeria monocytogenes hypothetical protein lmo0525 SWALL:Q8Y9K2 (EMBL:AL591975) (443 aa) fasta scores: E(): 8.1e-18, 28.17% id in 465 aa; lipoprotein 307372 3096089 BPSS0226 Burkholderia pseudomallei K96243 lipoprotein YP_110246.1 305951 D 272560 CDS YP_110247.1 53721262 3096090 307527..311486 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane protein rsc0896 or rs06183 SWALL:Q8Y0Z7 (EMBL:AL646061) (1261 aa) fasta scores: E(): 8e-67, 44.29% id in 1314 aa, and to Pseudomonas aeruginosa hypothetical protein pa4735 SWALL:Q9HV64 (EMBL:AE004887) (1088 aa) fasta scores: E(): 1.9e-29, 24.82% id in 1305 aa; hypothetical protein 311486 3096090 BPSS0227 Burkholderia pseudomallei K96243 hypothetical protein YP_110247.1 307527 D 272560 CDS YP_110248.1 53721263 3096164 complement(311611..311874) 1 NC_006351.1 hypothetical protein 311874 3096164 BPSS0228 Burkholderia pseudomallei K96243 hypothetical protein YP_110248.1 311611 R 272560 CDS YP_110249.1 53721264 3096456 complement(312200..313861) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr2187 SWALL:Q98IY7 (EMBL:AP002999) (508 aa) fasta scores: E(): 1.1e-53, 43.19% id in 551 aa; hypothetical protein 313861 3096456 BPSS0229 Burkholderia pseudomallei K96243 hypothetical protein YP_110249.1 312200 R 272560 CDS YP_110250.1 53721265 3096457 complement(314442..314834) 1 NC_006351.1 Similar to Photorhabdus luminescens ORF38 SWALL:AAO18063 (EMBL:AY144116) (131 aa) fasta scores: E(): 1.7e-23, 47.61% id in 126 aa, and to Bacillus subtilis hypothetical protein YycE SWALL:YYCE_BACSU (SWALL:P37479) (139 aa) fasta scores: E(): 1.1e-16, 38.52% id in 122 aa; glyoxalase/bleomycin resistance protein/dioxygenase 314834 3096457 BPSS0230 Burkholderia pseudomallei K96243 glyoxalase/bleomycin resistance protein/dioxygenase YP_110250.1 314442 R 272560 CDS YP_110251.1 53721266 3095687 complement(314959..315243) 1 NC_006351.1 Similar to the N-terminal region of Ralstonia solanacearum hypothetical protein RSP1103 or RS02609 SWALL:Q8XQW5 (EMBL:AL646082) (56 aa) fasta scores: E(): 2, 45.65% id in 46 aa; hypothetical protein 315243 3095687 BPSS0231 Burkholderia pseudomallei K96243 hypothetical protein YP_110251.1 314959 R 272560 CDS YP_110252.1 53721267 3096335 315412..316482 1 NC_006351.1 Similar to Methylococcus capsulatus squalene synthase Sqs SWALL:O69445 (EMBL:Y09978) (362 aa) fasta scores: E(): 8.3e-20, 29.1% id in 323 aa; squalene/phytoene synthase 316482 3096335 BPSS0232 Burkholderia pseudomallei K96243 squalene/phytoene synthase YP_110252.1 315412 D 272560 CDS YP_110253.1 53721268 3095984 complement(318009..319016) 1 NC_006351.1 Similar to Pseudomonas aeruginosa cyanide insensitive terminal oxidase CioB or pa3929 SWALL:O07441 (EMBL:Y10528) (335 aa) fasta scores: E(): 3.3e-78, 60.59% id in 335 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 cytochrome D ubiquinol oxidase subunit II CydB or Cyd-2 or b0734 or c0812 or z0901 or ecs0769 SWALL:CYDB_ECOLI (SWALL:P11027) (379 aa) fasta scores: E(): 1.3e-21, 28.22% id in 372 aa; cytochrome oxidase subunit II 319016 3095984 BPSS0234 Burkholderia pseudomallei K96243 cytochrome oxidase subunit II YP_110253.1 318009 R 272560 CDS YP_110254.1 53721269 3095529 complement(319052..320464) 1 NC_006351.1 Similar to Salmonella typhimurium cytochrome BD2 subunit I stm0360 SWALL:Q8ZRG3 (EMBL:AE008712) (467 aa) fasta scores: E(): 1e-118, 65.73% id in 467 aa, and to Escherichia coli, and Escherichia coli O6 cytochrome D ubiquinol oxidase subunit I CydA or Cyd-1 or b0733 or c0811 SWALL:CYDA_ECOLI (SWALL:P11026) (522 aa) fasta scores: E(): 2.4e-39, 31.67% id in 502 aa; cytochrome oxidase subunit I 320464 3095529 BPSS0235 Burkholderia pseudomallei K96243 cytochrome oxidase subunit I YP_110254.1 319052 R 272560 CDS YP_110255.1 53721270 3097028 321065..322078 1 NC_006351.1 Similar to Escherichia coli low-specificity L-threonine aldolase LtaE or b0870 SWALL:LTAE_ECOLI (SWALL:P75823) (333 aa) fasta scores: E(): 1.4e-68, 58.98% id in 334 aa, and to Salmonella typhimurium LT2 L-allo-threonine aldolase LtaA SWALL:Q8ZQF1 (EMBL:AE008737) (333 aa) fasta scores: E(): 1.3e-70, 61.07% id in 334 aa; L-allo-threonine aldolase 322078 ltaE 3097028 ltaE Burkholderia pseudomallei K96243 L-allo-threonine aldolase YP_110255.1 321065 D 272560 CDS YP_110256.1 53721271 3095530 complement(322047..323024) 1 NC_006351.1 specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 323024 3095530 BPSS0237 Burkholderia pseudomallei K96243 chromosome replication initiation inhibitor protein YP_110256.1 322047 R 272560 CDS YP_110257.1 53721272 3095959 323180..325342 1 NC_006351.1 Similar to Bacillus subtilis penicillin-binding protein 1A/1B PonA SWALL:PBPA_BACSU (SWALL:P39793) (914 aa) fasta scores: E(): 8.7e-44, 30.94% id in 685 aa, and to Escherichia coli penicillin-binding protein 1B MrcB or PonB or PbpF or b0149 SWALL:PBPB_ECOLI (SWALL:P02919) (844 aa) fasta scores: E(): 9.3e-43, 31.98% id in 591 aa; penicillin-binding protein 325342 3095959 BPSS0238 Burkholderia pseudomallei K96243 penicillin-binding protein YP_110257.1 323180 D 272560 CDS YP_110258.1 53721273 3096136 325355..325963 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O6 hypothetical protein YicG or b3646 or c4470 SWALL:YICG_ECOLI (SWALL:P31432) (205 aa) fasta scores: E(): 5.6e-29, 42.57% id in 202 aa, and to Vibrio cholerae hypothetical protein Vc2115 vc2115 SWALL:Q9KQ86 (EMBL:AE004285) (207 aa) fasta scores: E(): 1.2e-32, 51.77% id in 197 aa; hypothetical protein 325963 3096136 BPSS0239 Burkholderia pseudomallei K96243 hypothetical protein YP_110258.1 325355 D 272560 CDS YP_110259.1 53721274 3096137 complement(326012..326830) 1 NC_006351.1 with HmuTU is involved in the import of hemin; hemin importer ATP-binding subunit 326830 hmuV 3096137 hmuV Burkholderia pseudomallei K96243 hemin importer ATP-binding subunit YP_110259.1 326012 R 272560 CDS YP_110260.1 53721275 3096191 complement(327285..328406) 1 NC_006351.1 Similar to Yersinia pestis hemin transport system permease HmuU or ypo0280 or y0540 SWALL:HMUU_YERPE (SWALL:Q56992) (334 aa) fasta scores: E(): 2.6e-43, 45.48% id in 343 aa, and to Bordetella avium BhuU SWALL:Q8L1U4 (EMBL:AY095952) (334 aa) fasta scores: E(): 9.1e-45, 49.41% id in 344 aa; hemin ABC transporter membrane protein 328406 3096191 BPSS0241 Burkholderia pseudomallei K96243 hemin ABC transporter membrane protein YP_110260.1 327285 R 272560 CDS YP_110261.1 53721276 3094999 complement(328774..329700) 1 NC_006351.1 Similar to Yersinia pestis hemin-binding periplasmic protein precursor HmuT or ypo0281 or y0541 SWALL:HMUT_YERPE (SWALL:Q56991) (279 aa) fasta scores: E(): 2.7e-17, 41.72% id in 266 aa, and to Escherichia coli O157:H7 periplasmic binding protein ChuT or z4913 or ecs4382 SWALL:Q8X5N7 (EMBL:AE005576) (304 aa) fasta scores: E(): 8.4e-22, 32.97% id in 276 aa; hemin transport system, substrate-binding protein 329700 3094999 BPSS0242 Burkholderia pseudomallei K96243 hemin transport system, substrate-binding protein YP_110261.1 328774 R 272560 CDS YP_110262.1 53721277 3095000 complement(329697..330848) 1 NC_006351.1 Similar to Yersinia pestis hemin transport protein HmuS or ypo0282 or y0542 SWALL:HMUS_YERPE (SWALL:Q56990) (345 aa) fasta scores: E(): 1.8e-45, 42.2% id in 327 aa, and to Ralstonia solanacearum probable hemin transport protein rsp0243 or rs03723 SWALL:Q8XT72 (EMBL:AL646077) (380 aa) fasta scores: E(): 3.5e-70, 56.7% id in 358 aa; hemin ABC transport system-related protein 330848 3095000 BPSS0243 Burkholderia pseudomallei K96243 hemin ABC transport system-related protein YP_110262.1 329697 R 272560 CDS YP_110263.1 53721278 3096221 complement(330905..333184) 1 NC_006351.1 Similar to Caulobacter crescentus TonB-dependent receptor cc2194 SWALL:Q9A6A0 (EMBL:AE005891) (733 aa) fasta scores: E(): 4.5e-100, 41.94% id in 739 aa, and to Vibrio mimicus heme receptor precursor MhuA SWALL:Q9AQK5 (EMBL:AB048382) (710 aa) fasta scores: E(): 1.9e-33, 29.43% id in 727 aa; exported heme receptor protein 333184 3096221 BPSS0244 Burkholderia pseudomallei K96243 exported heme receptor protein YP_110263.1 330905 R 272560 CDS YP_110264.1 53721279 3096316 complement(333659..333886) 1 NC_006351.1 hypothetical protein 333886 3096316 BPSS0245 Burkholderia pseudomallei K96243 hypothetical protein YP_110264.1 333659 R 272560 CDS YP_110265.1 53721280 3096317 complement(334048..334944) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 7.3e-26, 32.88% id in 298 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0448 SWALL:Q9I670 (EMBL:AE004482) (302 aa) fasta scores: E(): 2.3e-33, 37.07% id in 294 aa; LysR family transcriptional regulator 334944 3096317 BPSS0246 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110265.1 334048 R 272560 CDS YP_110266.1 53721281 3096126 335111..335959 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable permease of ABC transporter pa3253 SWALL:Q9HYY7 (EMBL:AE004747) (265 aa) fasta scores: E(): 2.2e-19, 29.32% id in 266 aa, and to Ralstonia solanacearum probable permease transmembrane ABC transporter protein rsc1793 or rs04192 SWALL:Q8XYG5 (EMBL:AL646066) (265 aa) fasta scores: E(): 1e-14, 28.15% id in 238 aa; ABC transporter membrane protein 335959 3096126 BPSS0247 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_110266.1 335111 D 272560 CDS YP_110267.1 53721282 3096305 335964..337007 1 NC_006351.1 Similar to Rhizobium loti ABC transporter ATP-binding protein mll2948 SWALL:Q98HB1 (EMBL:AP003000) (371 aa) fasta scores: E(): 8.1e-41, 43.31% id in 314 aa, and to Alicyclobacillus acidocaldarius ABC-transporter ATP-binding protein CysA SWALL:Q9RHZ7 (EMBL:AJ252160) (393 aa) fasta scores: E(): 1.4e-37, 46.1% id in 295 aa; ABC transporter ATP-binding protein 337007 3096305 BPSS0248 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_110267.1 335964 D 272560 CDS YP_110268.1 53721283 3096306 337034..338122 1 NC_006351.1 Similar to Ralstonia solanacearum probable solute-binding periplasmic rsc1791 or rs04190 SWALL:Q8XYG7 (EMBL:AL646066) (343 aa) fasta scores: E(): 1.5e-37, 37.27% id in 330 aa, and to Campylobacter jejuni periplasmic solute-binding protein cj0727 SWALL:Q9PPI0 (EMBL:AL139076) (348 aa) fasta scores: E(): 8.9e-28, 31.05% id in 351 aa; ABC transport system, substrate-binding exported protein 338122 3096306 BPSS0249 Burkholderia pseudomallei K96243 ABC transport system, substrate-binding exported protein YP_110268.1 337034 D 272560 CDS YP_110269.1 53721284 3096147 338112..338960 1 NC_006351.1 Similar to Ralstonia solanacearum probable transport system permease transmembrane ABC transporter protein rsc1792 or rs04191 SWALL:Q8XYG6 (EMBL:AL646066) (282 aa) fasta scores: E(): 4.9e-17, 35.03% id in 254 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu2148 or agr_c_3892 SWALL:Q8UDH7 (EMBL:AE009165) (331 aa) fasta scores: E(): 3.4e-15, 31.53% id in 260 aa; ABC transporter membrane protein 338960 3096147 BPSS0250 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_110269.1 338112 D 272560 CDS YP_110270.1 53721285 3095080 338974..339486 1 NC_006351.1 C-terminal region is similar to Methanosarcina mazei hypothetical protein mm3075 SWALL:Q8PSK4 (EMBL:AE013563) (156 aa) fasta scores: E(): 3.9e-14, 43.38% id in 136 aa, and Aquifex pyrophilus hypothetical protein SWALL:AAN12294 (EMBL:AY135660) (150 aa) fasta scores: E(): 1.4e-12, 38.62% id in 145 aa. Possible alternative start codon at codon 20; lysine decarboxylase 339486 3095080 BPSS0251 Burkholderia pseudomallei K96243 lysine decarboxylase YP_110270.1 338974 D 272560 CDS YP_110271.1 53721286 3095081 339553..340752 1 NC_006351.1 Similar to Ralstonia solanacearum probable porin transmembrane protein rsc1082 or rs04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 3.1e-44, 43.06% id in 404 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.1e-20, 34.18% id in 392 aa; porin 340752 3095081 BPSS0252 Burkholderia pseudomallei K96243 porin YP_110271.1 339553 D 272560 CDS YP_110272.1 53721287 3096423 complement(340812..341774) 1 NC_006351.1 Similar to Pasteurella multocida hypothetical protein pm1646 SWALL:Q9CKH2 (EMBL:AE006201) (317 aa) fasta scores: E(): 1.2e-59, 52.68% id in 317 aa, and to Bacillus halodurans transcriptional regulator bh0780 SWALL:Q9KER9 (EMBL:AP001509) (316 aa) fasta scores: E(): 1.7e-24, 29.83% id in 305 aa; DNA-binding protein 341774 3096423 BPSS0253 Burkholderia pseudomallei K96243 DNA-binding protein YP_110272.1 340812 R 272560 CDS YP_110273.1 53721288 3096194 complement(341809..342303) 1 NC_006351.1 Similar to Escherichia coli ribose 5-phosphate isomerase B RpiB or b4090 SWALL:RPIB_ECOLI (SWALL:P37351) (149 aa) fasta scores: E(): 5.9e-21, 46.62% id in 148 aa, and to Yersinia pestis ribose 5-phosphate isomerase B RpiB or ypo3353 or y0837 SWALL:AAM84422 (EMBL:AJ414156) (151 aa) fasta scores: E(): 1.7e-28, 55.4% id in 148 aa; ribose 5-phosphate isomerase 342303 3096194 BPSS0254 Burkholderia pseudomallei K96243 ribose 5-phosphate isomerase YP_110273.1 341809 R 272560 CDS YP_110274.1 53721289 3096195 342542..344059 1 NC_006351.1 Similar to Escherichia coli ribose transport ATP-binding protein RbsA or b3749 SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 2.6e-60, 40.89% id in 494 aa, and to Yersinia pestis sugar transport ATP-binding protein ypo0858 SWALL:Q8ZHN2 (EMBL:AJ414145) (502 aa) fasta scores: E(): 1.6e-74, 48.77% id in 490 aa; ribose ABC transporter ATP-binding protein 344059 3096195 BPSS0255 Burkholderia pseudomallei K96243 ribose ABC transporter ATP-binding protein YP_110274.1 342542 D 272560 CDS YP_110275.1 53721290 3095953 344068..345045 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribose transport system permease RbsC or b3750 or c4678 or z5251 or ecs4692 SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 1.3e-45, 53.31% id in 302 aa, and to Salmonella typhimurium, and Salmonella typhi ABC superfamily stm3883 or sty3895 SWALL:Q8XFM3 (EMBL:AE008881) (321 aa) fasta scores: E(): 5.1e-46, 53.97% id in 302 aa; ribose ABC transporter permease 345045 rbsC 3095953 rbsC Burkholderia pseudomallei K96243 ribose ABC transporter permease YP_110275.1 344068 D 272560 CDS YP_110276.1 53721291 3096719 345077..346105 1 NC_006351.1 Similar to Escherichia coli D-ribose-binding periplasmic protein precursor RbsB or RbsP or PrlB or b3751 SWALL:RBSB_ECOLI (SWALL:P02925) (296 aa) fasta scores: E(): 4.1e-13, 28.18% id in 298 aa, and to Brucella melitensis D-ribose-binding periplasmic protein precursor bmei0393 SWALL:Q8YIQ0 (EMBL:AE009482) (325 aa) fasta scores: E(): 6.3e-54, 51.09% id in 321 aa; ribose ABC transport system, substrate-binding exported protein 346105 3096719 BPSS0257 Burkholderia pseudomallei K96243 ribose ABC transport system, substrate-binding exported protein YP_110276.1 345077 D 272560 CDS YP_110277.1 53721292 3095743 346117..346887 1 NC_006351.1 Similar to Escherichia coli 2-deoxy-D-gluconate 3-dehydrogenase KduD or b2842 SWALL:KDUD_ECOLI (SWALL:P37769) (253 aa) fasta scores: E(): 9.3e-24, 37.45% id in 251 aa, and to Yersinia pestis dehydrogenase ypo3351 or y0839 SWALL:Q8ZBQ6 (EMBL:AJ414156) (256 aa) fasta scores: E(): 1.7e-39, 52.17% id in 253 aa; short chain dehydrogenase 346887 3095743 BPSS0258 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_110277.1 346117 D 272560 CDS YP_110278.1 53721293 3095744 346953..348089 1 NC_006351.1 Similar to Pseudomonas putida 2,3-butanediol dehydrogenase Adh SWALL:Q59696 (EMBL:L35343) (362 aa) fasta scores: E(): 2.8e-32, 32.12% id in 358 aa, and to Yersinia pestis zinc-binding dehydrogenase ypo3352 SWALL:Q8ZBQ5 (EMBL:AJ414156) (371 aa) fasta scores: E(): 7.9e-88, 61.51% id in 356 aa; dehydrogenase 348089 3095744 BPSS0259 Burkholderia pseudomallei K96243 dehydrogenase YP_110278.1 346953 D 272560 CDS YP_110279.1 53721294 3096174 348094..349098 1 NC_006351.1 Similar to Yersinia pestis dihydroxyacetone kinase DhaK or ypo3350 SWALL:Q8ZBQ7 (EMBL:AJ414156) (333 aa) fasta scores: E(): 2.1e-72, 62.72% id in 330 aa, and to Selenomonas ruminantium subsp. ruminantium dihydroxyacetone kinase DhaK1 SWALL:Q93PV9 (EMBL:AF297121) (329 aa) fasta scores: E(): 2.6e-45, 43.3% id in 321 aa; kinase 349098 3096174 BPSS0260 Burkholderia pseudomallei K96243 kinase YP_110279.1 348094 D 272560 CDS YP_110280.1 53721295 3096124 349095..349754 1 NC_006351.1 Similar to the plasmid-borne Rhizobium meliloti dihydroxyacetone kinase rb0299 or smb20313 SWALL:Q92WN3 (EMBL:AL603643) (213 aa) fasta scores: E(): 5.6e-36, 54.93% id in 213 aa, and to Selenomonas ruminantium subsp. ruminantium dihydroxyacetone kinase DhaK2 SWALL:Q9F677 (EMBL:AF297121) (207 aa) fasta scores: E(): 1.2e-19, 37.18% id in 199 aa; kinase 349754 3096124 BPSS0261 Burkholderia pseudomallei K96243 kinase YP_110280.1 349095 D 272560 CDS YP_110281.1 53721296 3096125 complement(349788..350261) 1 NC_006351.1 Similar to Salmonella typhi aminoglycoside 6'-N-acetyltransferase Aac or sty1445 SWALL:Q8Z762 (EMBL:AL627270) (172 aa) fasta scores: E(): 4.6e-23, 49.65% id in 145 aa, and to Enterobacter aerogenes aminoglycoside N AacA7 SWALL:AAC6_ENTAE (SWALL:P50858) (152 aa) fasta scores: E(): 9.3e-17, 43.91% id in 148 aa; aminoglycoside 6'-N-acetyltransferase 350261 3096125 BPSS0262 Burkholderia pseudomallei K96243 aminoglycoside 6'-N-acetyltransferase YP_110281.1 349788 R 272560 CDS YP_110282.1 53721297 3096310 complement(350258..350713) 1 NC_006351.1 hypothetical protein 350713 3096310 BPSS0263 Burkholderia pseudomallei K96243 hypothetical protein YP_110282.1 350258 R 272560 CDS YP_110283.1 53721298 3096122 complement(351133..351393) 1 NC_006351.1 hypothetical protein 351393 3096122 BPSS0264 Burkholderia pseudomallei K96243 hypothetical protein YP_110283.1 351133 R 272560 CDS YP_110284.1 53721299 3096123 complement(351601..352749) 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.1e-21, 33.58% id in 405 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 1.6e-34, 39.75% id in 405 aa; porin-related protein 352749 3096123 BPSS0265 Burkholderia pseudomallei K96243 porin-related protein YP_110284.1 351601 R 272560 CDS YP_110285.1 53721300 3095082 353062..353862 1 NC_006351.1 Similar to Ralstonia solanacearum probable signal peptide protein rsc0922 or rs04493 SWALL:Q8Y0X1 (EMBL:AL646061) (266 aa) fasta scores: E(): 4.7e-57, 62.54% id in 259 aa, and to Brucella melitensis ABC transporter substrate binding protein bmei1954 SWALL:Q8YEC4 (EMBL:AE009628) (268 aa) fasta scores: E(): 7.2e-42, 46% id in 263 aa; hypothetical protein 353862 3095082 BPSS0266 Burkholderia pseudomallei K96243 hypothetical protein YP_110285.1 353062 D 272560 CDS YP_110286.1 53721301 3096044 complement(354335..355450) 1 NC_006351.1 Similar to Pseudomonas aeruginosa arginine/ornithine transport operon protein Aot AotO or pa0891 SWALL:O50184 (EMBL:AF012537) (370 aa) fasta scores: E(): 1.3e-51, 43.39% id in 371 aa, and to Rhizobium loti hypothetical protein mlr2771 SWALL:Q98HP7 (EMBL:AP003000) (351 aa) fasta scores: E(): 1.3e-09, 30.34% id in 379 aa; hypothetical protein 355450 3096044 BPSS0267 Burkholderia pseudomallei K96243 hypothetical protein YP_110286.1 354335 R 272560 CDS YP_110287.1 53721302 3096045 355722..357836 1 NC_006351.1 Similar to Rhizobium loti O-antigen acetylase mlr0695 SWALL:Q98M77 (EMBL:AP002995) (688 aa) fasta scores: E(): 1.3e-66, 42.93% id in 694 aa, and to Pseudomonas aeruginosa probable O-antigen acetylase pa5238 SWALL:Q9HTV2 (EMBL:AE004936) (662 aa) fasta scores: E(): 6e-32, 31.62% id in 702 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site; O-antigen acetylase 357836 3096045 BPSS0268 Burkholderia pseudomallei K96243 O-antigen acetylase YP_110287.1 355722 D 272560 CDS YP_110288.1 53721303 3096303 357861..357995 1 NC_006351.1 hypothetical protein 357995 3096303 BPSS0268A Burkholderia pseudomallei K96243 hypothetical protein YP_110288.1 357861 D 272560 CDS YP_110289.1 53721304 3095641 complement(358089..358871) 1 NC_006351.1 Similar to Escherichia coli lysine-arginine-ornithine-binding periplasmic protein precursor ArgT or b2310 SWALL:ARGT_ECOLI (SWALL:P09551) (260 aa) fasta scores: E(): 2.6e-52, 53.66% id in 259 aa, and histidine-binding periplasmic protein precursor HisJ or b2309 or c2851 or z3571 or ecs3193 SWALL:HISJ_ECOLI (SWALL:P39182) (260 aa) fasta scores: E(): 3.5e-52, 52.51% id in 259 aa; lysine-arginine-ornithine transport system, binding exported protein 358871 argT 3095641 argT Burkholderia pseudomallei K96243 lysine-arginine-ornithine transport system, binding exported protein YP_110289.1 358089 R 272560 CDS YP_110290.1 53721305 3096347 complement(359105..360004) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2921 SWALL:Q9HZS6 (EMBL:AE004718) (329 aa) fasta scores: E(): 2.7e-26, 37% id in 300 aa, and to Escherichia coli transcriptional regulator AbgR or b1339 SWALL:ABGR_ECOLI (SWALL:P77744) (302 aa) fasta scores: E(): 2e-21, 29.96% id in 297 aa; LysR family transcriptional regulator 360004 3096347 BPSS0270 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110290.1 359105 R 272560 CDS YP_110291.1 53721306 3096348 360140..361327 1 NC_006351.1 Similar to Campylobacter jejuni hippurate hydrolase HipO or cj0985C SWALL:HIPO_CAMJE (SWALL:P45493) (383 aa) fasta scores: E(): 5.6e-56, 44.44% id in 387 aa, and to Agrobacterium tumefaciens amidohydrolase atu3635 or agr_l_2386 SWALL:Q8U9U0 (EMBL:AE009292) (430 aa) fasta scores: E(): 6.1e-67, 47.84% id in 395 aa; peptidase 361327 3096348 BPSS0271 Burkholderia pseudomallei K96243 peptidase YP_110291.1 360140 D 272560 CDS YP_110292.1 53721307 3096146 361615..362931 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable MFS transporter pa4343 SWALL:Q9HW58 (EMBL:AE004850) (439 aa) fasta scores: E(): 2.3e-64, 46.82% id in 425 aa, and to Escherichia coli citrate-proton symporter CitA or Cit SWALL:CIT1_ECOLI (SWALL:P07661) (431 aa) fasta scores: E(): 1.3e-45, 36.77% id in 416 aa; transporter protein 362931 3096146 BPSS0272 Burkholderia pseudomallei K96243 transporter protein YP_110292.1 361615 D 272560 CDS YP_110293.1 53721308 3096261 complement(363494..364213) 1 NC_006351.1 Similar to Escherichia coli and Escherichia coli O6 hypothetical transcriptional regulator YcdC or b1013 or c1150 SWALL:YCDC_ECOLI (SWALL:P75899) (212 aa) fasta scores: E(): 8.2e-22, 38.42% id in 190 aa, and to Pseudomonas putida transcriptional regulator, TetR family pp0594 SWALL:AAN66221 (EMBL:AE016776) (247 aa) fasta scores: E(): 8e-30, 37.39% id in 238 aa; TetR family transcriptional regulator 364213 3096261 BPSS0273 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_110293.1 363494 R 272560 CDS YP_110294.1 53721309 3096262 complement(364563..365420) 1 NC_006351.1 Similar to Pseudomonas putida pca regulon regulatory protein PcaR SWALL:PCAR_PSEPU (SWALL:Q52154) (291 aa) fasta scores: E(): 1.8e-38, 42.85% id in 273 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2255 or rs01304 SWALL:Q8XX61 (EMBL:AL646069) (275 aa) fasta scores: E(): 1.2e-68, 67.75% id in 276 aa. Possible alternative translational start site; IclR family transcriptional regulator 365420 3096262 BPSS0274 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_110294.1 364563 R 272560 CDS YP_110295.1 53721310 3095279 365585..366787 1 NC_006351.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 366787 pcaF 3095279 pcaF Burkholderia pseudomallei K96243 beta-ketoadipyl CoA thiolase YP_110295.1 365585 D 272560 CDS YP_110296.1 53721311 3096239 367570..369114 1 NC_006351.1 Similar to Escherichia coli aerotaxis receptor Aer or Air or b3072 SWALL:AER_ECOLI (SWALL:P50466) (506 aa) fasta scores: E(): 7.6e-83, 51.65% id in 515 aa, and to Ralstonia solanacearum probable aerotaxis sensor receptor rsp1224 or rs03168 SWALL:Q8XQK0 (EMBL:AL646083) (514 aa) fasta scores: E(): 8.2e-120, 69.84% id in 514 aa; aerotaxis receptor 369114 aer 3096239 aer Burkholderia pseudomallei K96243 aerotaxis receptor YP_110296.1 367570 D 272560 CDS YP_110297.1 53721312 3096479 complement(369207..370223) 1 NC_006351.1 Similar to Streptomyces sp. JP95 methyltransferase GrhL SWALL:Q8KSX2 (EMBL:AF509565) (343 aa) fasta scores: E(): 2e-16, 27.32% id in 333 aa, and to Mycobacterium tuberculosis methyltransferase rv0567 or mt0593 or mtv039.05 SWALL:O53764 (EMBL:AL021942) (340 aa) fasta scores: E(): 1.1e-16, 28.03% id in 321 aa; methyltransferase 370223 3096479 BPSS0277 Burkholderia pseudomallei K96243 methyltransferase YP_110297.1 369207 R 272560 CDS YP_110298.1 53721313 3095517 complement(370641..371681) 1 NC_006351.1 Low similarity to Pseudomonas sp. vanillate O-demethylase oxygenase subunit VanA SWALL:VANA_PSESP (SWALL:O05616) (354 aa) fasta scores: E(): 1.9e-06, 24.49% id in 298 aa, and to Xanthomonas campestris vanillate O-demethylase oxygenase subunit xcc0363 SWALL:AAM39682 (EMBL:AE012132) (358 aa) fasta scores: E(): 1.7e-08, 25.98% id in 304 aa; oxygenase 371681 3095517 BPSS0278 Burkholderia pseudomallei K96243 oxygenase YP_110298.1 370641 R 272560 CDS YP_110299.1 53721314 3095518 complement(371678..372625) 1 NC_006351.1 Very low similarity to parts of Arabidopsis thaliana rieske iron-sulfur protein at2g24820 SWALL:Q9SK50 (EMBL:AC006585) (539 aa) fasta scores: E(): 8e-13, 29.8% id in 255 aa, and to Anabaena sp. hypothetical protein all3866 SWALL:Q8YQG5 (EMBL:AP003594) (351 aa) fasta scores: E(): 8.4e-10, 32.89% id in 152 aa; Rieske iron-sulfur protein 372625 3095518 BPSS0279 Burkholderia pseudomallei K96243 Rieske iron-sulfur protein YP_110299.1 371678 R 272560 CDS YP_110300.1 53721315 3095352 complement(374061..375530) 1 NC_006351.1 Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 1.4e-130, 69.7% id in 482 aa, and to Salmonella typhi succinate-semialdehyde dehydrogenase sty2911 SWALL:Q8Z4F8 (EMBL:AL627276) (482 aa) fasta scores: E(): 7.2e-131, 70.12% id in 482 aa; succinate-semialdehyde dehydrogenase 375530 gabD 3095352 gabD Burkholderia pseudomallei K96243 succinate-semialdehyde dehydrogenase YP_110300.1 374061 R 272560 CDS YP_110301.1 53721316 3095139 complement(375588..376871) 1 NC_006351.1 Similar to Escherichia coli 4-aminobutyrate aminotransferase GabT or b2662 SWALL:GABT_ECOLI (SWALL:P22256) (426 aa) fasta scores: E(): 4.8e-79, 54.24% id in 424 aa, and to Ralstonia solanacearum probable 4-aminobutyrate aminotransferase rsc0029 or rs01852 SWALL:Q8Y3F1 (EMBL:AL646057) (426 aa) fasta scores: E(): 1.5e-108, 71.29% id in 418 aa; 4-aminobutyrate aminotransferase 376871 gabT 3095139 gabT Burkholderia pseudomallei K96243 4-aminobutyrate aminotransferase YP_110301.1 375588 R 272560 CDS YP_110302.1 53721317 3096438 377013..378707 1 NC_006351.1 Similar to Ralstonia solanacearum transcription regulator protein rsc0030 or rs01853 SWALL:Q8Y3F0 (EMBL:AL646057) (509 aa) fasta scores: E(): 3e-74, 57.69% id in 520 aa, and to Yersinia pestis GntR-family regulatory protein ypo2845 or y1389 SWALL:Q8ZCW3 (EMBL:AJ414154) (501 aa) fasta scores: E(): 3e-61, 46.1% id in 514 aa; GntR family transcriptional regulator 378707 3096438 BPSS0282 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_110302.1 377013 D 272560 CDS YP_110303.1 53721318 3096341 complement(378724..380208) 1 NC_006351.1 Similar to Bacillus halodurans hypothetical protein bh2308 SWALL:Q9KAH9 (EMBL:AP001515) (470 aa) fasta scores: E(): 1.9e-35, 25.87% id in 460 aa, and to Salmonella typhi membrane protein sty4802 SWALL:Q8Z128 (EMBL:AL627283) (467 aa) fasta scores: E(): 6.2e-19, 28.75% id in 480 aa; hypothetical protein 380208 3096341 BPSS0283 Burkholderia pseudomallei K96243 hypothetical protein YP_110303.1 378724 R 272560 CDS YP_110304.1 53721319 3096342 complement(380274..381041) 1 NC_006351.1 Similar to Escherichia coli transcriptional regulator KdgR or b1827 SWALL:KDGR_ECOLI (SWALL:P76268) (263 aa) fasta scores: E(): 1.8e-15, 30.92% id in 249 aa, and to Bacillus halodurans transcriptional regulator bh2137 SWALL:Q9KAZ9 (EMBL:AP001514) (251 aa) fasta scores: E(): 1e-18, 31.85% id in 248 aa; IclR family transcriptional regulator 381041 3096342 BPSS0284 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_110304.1 380274 R 272560 CDS YP_110305.1 53721320 3096046 complement(381038..381946) 1 NC_006351.1 Similar to Rhizobium loti N-formylglutamate amidohydrolase mll3040 SWALL:Q98H42 (EMBL:AP003001) (313 aa) fasta scores: E(): 1.5e-28, 37.72% id in 273 aa, and to Agrobacterium tumefaciens hypothetical protein atu3884 or agr_l_1927 SWALL:Q8U946 (EMBL:AE009319) (294 aa) fasta scores: E(): 8.5e-28, 36.49% id in 274 aa; hypothetical protein 381946 3096046 BPSS0285 Burkholderia pseudomallei K96243 hypothetical protein YP_110305.1 381038 R 272560 CDS YP_110306.1 53721321 3096677 complement(382862..383695) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr7896 SWALL:Q984Q1 (EMBL:AP003012) (278 aa) fasta scores: E(): 7.6e-27, 40.14% id in 269 aa, and to Streptomyces coelicolor integral membrane protein sco3164 or sce87.15C SWALL:Q9RKC3 (EMBL:AL939115) (281 aa) fasta scores: E(): 1.8e-26, 39.63% id in 275 aa; hypothetical protein 383695 3096677 BPSS0286 Burkholderia pseudomallei K96243 hypothetical protein YP_110306.1 382862 R 272560 CDS YP_110307.1 53721322 3095787 383913..384977 1 NC_006351.1 catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 384977 selD 3095787 selD Burkholderia pseudomallei K96243 selenophosphate synthetase YP_110307.1 383913 D 272560 CDS YP_110308.1 53721323 3096192 386335..387396 1 NC_006351.1 Similar to Ralstonia solanacearum purine nucleoside permease rsc0798 or rs05039 SWALL:Q8Y192 (EMBL:AL646061) (381 aa) fasta scores: E(): 2e-74, 56.32% id in 348 aa, and to Brucella melitensis purine nucleoside permease bmei0469 SWALL:Q8YIH5 (EMBL:AE009489) (345 aa) fasta scores: E(): 3.8e-56, 48.11% id in 318 aa; lipoprotein 387396 3096192 BPSS0288 Burkholderia pseudomallei K96243 lipoprotein YP_110308.1 386335 D 272560 CDS YP_110309.1 53721324 3096193 complement(387636..387929) 1 NC_006351.1 hypothetical protein 387929 3096193 BPSS0289 Burkholderia pseudomallei K96243 hypothetical protein YP_110309.1 387636 R 272560 CDS YP_110310.1 53721325 3096004 complement(388854..389858) 1 NC_006351.1 Similar to Burkholderia cepacia transcriptional regulator CeoR SWALL:Q8VL17 (EMBL:AY008288) (334 aa) fasta scores: E(): 8.5e-123, 91.01% id in 334 aa, and to Salmonella typhi transcriptional regulator sty1386 SWALL:Q8Z7A3 (EMBL:AL627270) (301 aa) fasta scores: E(): 8.7e-49, 43.79% id in 290 aa; LysR family transcriptional regulator 389858 3096004 BPSS0290 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110310.1 388854 R 272560 CDS YP_110311.1 53721326 3095511 389951..390901 1 NC_006351.1 C-terminal region is similar to Burkholderia cepacia lipase-like protein LlpE SWALL:Q8VL16 (EMBL:AY008288) (286 aa) fasta scores: E(): 7.8e-78, 74.55% id in 283 aa. C-terminus is similar to the C-terminal region of Ralstonia solanacearum probable lipase rsp1111 or rs02619 SWALL:Q8XQV7 (EMBL:AL646082) (357 aa) fasta scores: E(): 5.4e-46, 50.9% id in 277 aa; carboxylesterase 390901 3095511 BPSS0291 Burkholderia pseudomallei K96243 carboxylesterase YP_110311.1 389951 D 272560 CDS YP_110312.1 53721327 3095512 390952..392181 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor AcrA or MtcA or Lir or b0463 or z0578 or ecs0516 SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 5.3e-33, 32.98% id in 385 aa, and to Ralstonia solanacearum probable transmembrane multidrug efflux system transmembrane protein ys02620 or rsp1112 or rs02620 SWALL:Q8XQV6 (EMBL:AL646082) (438 aa) fasta scores: E(): 6.1e-78, 57.77% id in 405 aa; multidrug efflux system exported protein 392181 3095512 BPSS0292 Burkholderia pseudomallei K96243 multidrug efflux system exported protein YP_110312.1 390952 D 272560 CDS YP_110313.1 53721328 3096213 392243..395428 1 NC_006351.1 Similar to Pseudomonas aeruginosa multidrug resistance protein MexB or pa0426 SWALL:MEXB_PSEAE (SWALL:P52002) (1046 aa) fasta scores: E(): 3e-158, 42.63% id in 1046 aa, and to Escherichia coli probable aminoglycoside efflux pump AcrD or b2470 SWALL:ACRD_ECOLI (SWALL:P24177) (1037 aa) fasta scores: E(): 5.4e-157, 41.32% id in 1038 aa; multidrug-efflux transporter protein 395428 3096213 BPSS0293 Burkholderia pseudomallei K96243 multidrug-efflux transporter protein YP_110313.1 392243 D 272560 CDS YP_110314.1 53721329 3095805 395439..396971 1 NC_006351.1 Similar to Ralstonia solanacearum outer-membrane drug efflux protein rsp1114 or rs05506 SWALL:Q8XQV4 (EMBL:AL646082) (508 aa) fasta scores: E(): 8.9e-99, 59.63% id in 493 aa, and to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 2.2e-39, 35.33% id in 484 aa; multidrug efflux system lipoprotein 396971 3095805 BPSS0294 Burkholderia pseudomallei K96243 multidrug efflux system lipoprotein YP_110314.1 395439 D 272560 CDS YP_110315.1 53721330 3095806 complement(397880..399121) 1 NC_006351.1 Similar to Escherichia coli O157:H7 symport protein z0888 or ecs0758 SWALL:Q8X4W0 (EMBL:AE005251) (426 aa) fasta scores: E(): 2.6e-37, 33% id in 406 aa, and to Bacillus subtilis C4-dicarboxylate transport protein DctA or DctP SWALL:DCTA_BACSU (SWALL:P96603) (421 aa) fasta scores: E(): 2.4e-35, 30.53% id in 393 aa; transport related membrane protein 399121 3095806 BPSS0295 Burkholderia pseudomallei K96243 transport related membrane protein YP_110315.1 397880 R 272560 CDS YP_110316.1 53721331 3097000 complement(399105..399764) 1 NC_006351.1 Similar to Bradyrhizobium japonicum transcriptional regulatory protein bll4018 SWALL:BAC49283 (EMBL:AP005949) (230 aa) fasta scores: E(): 1.8e-26, 40.8% id in 223 aa, and to Thermoanaerobacter tengcongensis transcriptional regulator tte2558 SWALL:Q8R766 (EMBL:AE013196) (225 aa) fasta scores: E(): 1e-12, 31.52% id in 203 aa; GntR family transcriptional regulator 399764 3097000 BPSS0296 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_110316.1 399105 R 272560 CDS YP_110317.1 53721332 3097001 399920..400390 1 NC_006351.1 Similar to Listeria innocua hypothetical protein lin2871 SWALL:Q927B8 (EMBL:AL596173) (153 aa) fasta scores: E(): 5.2e-07, 33.61% id in 119 aa, and to Bacillus subtilis YitI protein SWALL:O06744 (EMBL:Z99109) (154 aa) fasta scores: E(): 4.6e-05, 27.48% id in 131 aa; acetyltransferase 400390 3097001 BPSS0297 Burkholderia pseudomallei K96243 acetyltransferase YP_110317.1 399920 D 272560 CDS YP_110318.1 53721333 3096364 complement(400571..401470) 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein xac0191 SWALL:AAM35083 (EMBL:AE011644) (305 aa) fasta scores: E(): 3.3e-21, 31.86% id in 295 aa, and to Aquifex aeolicus hypothetical protein aq_1392 SWALL:O67397 (EMBL:AE000738) (292 aa) fasta scores: E(): 3e-14, 28.85% id in 298 aa; transport related membrane protein 401470 3096364 BPSS0298 Burkholderia pseudomallei K96243 transport related membrane protein YP_110318.1 400571 R 272560 CDS YP_110319.1 53721334 3096062 complement(401900..403765) 1 NC_006351.1 Similar to the N-terminal region of Streptomyces coelicolor polyketide synthase sco5892 or sc3f7.12 SWALL:O54155 (EMBL:AL939125) (2297 aa) fasta scores: E(): 2.6e-69, 41.73% id in 587 aa, and to the full length of Mycobacterium tuberculosis fatty-acid--CoA ligase rv1521 or mt1572 or mtcy19g5.07 SWALL:FD25_MYCTU (SWALL:Q50586) (583 aa) fasta scores: E(): 5.3e-56, 36.65% id in 592 aa; fatty-acid CoA ligase 403765 3096062 BPSS0299 Burkholderia pseudomallei K96243 fatty-acid CoA ligase YP_110319.1 401900 R 272560 CDS YP_110320.1 53721335 3096063 complement(403782..404681) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O6 malonyl CoA-acyl carrier protein transacylase FabD or TfpA or b1092 or c1361 SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 2.6e-24, 34.75% id in 305 aa, and to Bacillus subtilis PksC protein SWALL:O34825 (EMBL:Z99112) (288 aa) fasta scores: E(): 1.3e-39, 43.35% id in 286 aa; malonyl CoA-ACP transacylase 404681 3096063 BPSS0300 Burkholderia pseudomallei K96243 malonyl CoA-ACP transacylase YP_110320.1 403782 R 272560 CDS YP_110321.1 53721336 3095252 complement(404682..405113) 1 NC_006351.1 hypothetical protein 405113 3095252 BPSS0301 Burkholderia pseudomallei K96243 hypothetical protein YP_110321.1 404682 R 272560 CDS YP_110322.1 53721337 3095150 complement(405181..407040) 1 NC_006351.1 Similar to Escherichia coli probable crotonobetaine/carnitine-CoA ligase CaiC or b0037 SWALL:CAIC_ECOLI (SWALL:P31552) (522 aa) fasta scores: E(): 2.8e-37, 29.91% id in 488 aa, and to Mycobacterium tuberculosis chain fatty-acid-CoA ligase FadD13 or rv3089 or mtv013.10 or mt3174 SWALL:O53306 (EMBL:AL021309) (503 aa) fasta scores: E(): 5.9e-43, 32.62% id in 518 aa; fatty acid biosynthesis-related CoA ligase 407040 3095150 BPSS0302 Burkholderia pseudomallei K96243 fatty acid biosynthesis-related CoA ligase YP_110322.1 405181 R 272560 CDS YP_110323.1 53721338 3095151 complement(407070..408329) 1 NC_006351.1 Similar to Pseudomonas aeruginosa diaminopimelate decarboxylase pa5277 SWALL:DCDA_PSEAE (SWALL:P19572) (415 aa) fasta scores: E(): 1.6e-21, 31.68% id in 404 aa, and to Escherichia coli diaminopimelate decarboxylase LysA or b2838 SWALL:DCDA_ECOLI (SWALL:P00861) (420 aa) fasta scores: E(): 4.8e-19, 31.76% id in 403 aa; diaminopimelate decarboxylase 408329 3095151 BPSS0303 Burkholderia pseudomallei K96243 diaminopimelate decarboxylase YP_110323.1 407070 R 272560 CDS YP_110324.1 53721339 3096185 complement(408326..409807) 1 NC_006351.1 hypothetical protein 409807 3096185 BPSS0304 Burkholderia pseudomallei K96243 hypothetical protein YP_110324.1 408326 R 272560 CDS YP_110325.1 53721340 3095147 complement(409804..410859) 1 NC_006351.1 Similar to Bacillus subtilis ketol-acid reductoisomerase IlvC SWALL:ILVC_BACSU (SWALL:P37253) (342 aa) fasta scores: E(): 7e-27, 36.91% id in 298 aa, and to Neisseria meningitidis ketol-acid reductoisomerase nma1763 SWALL:ILVC_NEIMA (SWALL:Q9JTI3) (337 aa) fasta scores: E(): 9.9e-31, 35.71% id in 322 aa; ketol-acid reductoisomerase 410859 3095147 BPSS0305 Burkholderia pseudomallei K96243 ketol-acid reductoisomerase YP_110325.1 409804 R 272560 CDS YP_110326.1 53721341 3095148 complement(410865..423266) 1 NC_006351.1 Similar to Xanthomonas albilineans albicidin multifunctional polyketide-peptide synthase XabB SWALL:Q9AIT3 (EMBL:AF239749) (4801 aa) fasta scores: E(): 1.4e-123, 36.11% id in 3458 aa, and to Bacillus subtilis polyketide synthase PksM or PksY SWALL:PKSM_BACSU (SWALL:P40872) (4273 aa) fasta scores: E(): 2.3e-93, 36% id in 2861 aa; multifunctional polyketide-peptide syntase 423266 3095148 BPSS0306 Burkholderia pseudomallei K96243 multifunctional polyketide-peptide syntase YP_110326.1 410865 R 272560 CDS YP_110327.1 53721342 3096346 complement(423325..424737) 1 NC_006351.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 424737 3096346 BPSS0307 Burkholderia pseudomallei K96243 gamma-aminobutyraldehyde dehydrogenase YP_110327.1 423325 R 272560 CDS YP_110328.1 53721343 3096053 complement(424731..426152) 1 NC_006351.1 Similar to Rhizobium loti aminotransferase mll3663 SWALL:Q98FQ6 (EMBL:AP003002) (472 aa) fasta scores: E(): 4.5e-88, 48.42% id in 444 aa, and to Pseudomonas aeruginosa probable class III aminotransferase pa4805 SWALL:Q9HV04 (EMBL:AE004893) (468 aa) fasta scores: E(): 4.9e-82, 47.21% id in 449 aa; hypothetical protein 426152 3096053 BPSS0308 Burkholderia pseudomallei K96243 hypothetical protein YP_110328.1 424731 R 272560 CDS YP_110329.1 53721344 3096054 complement(426161..427240) 1 NC_006351.1 Similar to Pseudomonas syringae syringomycin biosynthesis enzyme SyrP SWALL:P97053 (EMBL:U88574) (353 aa) fasta scores: E(): 2.4e-22, 31.43% id in 334 aa, and to Streptomyces verticillus SyrP-like protein SWALL:Q9FB16 (EMBL:AF210249) (339 aa) fasta scores: E(): 1.8e-21, 29.51% id in 332 aa; peptide synthase regulatory protein 427240 3096054 BPSS0309 Burkholderia pseudomallei K96243 peptide synthase regulatory protein YP_110329.1 426161 R 272560 CDS YP_110330.1 53721345 3095679 complement(428238..428756) 1 NC_006351.1 hypothetical protein 428756 3095679 BPSS0310 Burkholderia pseudomallei K96243 hypothetical protein YP_110330.1 428238 R 272560 CDS YP_110331.1 53721346 3096234 complement(428856..437384) 1 NC_006351.1 Similar to Microcystis aeruginosa peptide synthetase and polyketide synthase McyG SWALL:Q9FDT8 (EMBL:AB032549) (2632 aa) fasta scores: E(): 1.9e-45, 25.62% id in 2420 aa, and to Ralstonia solanacearum probable polyketide synthase rsc1810 or rs04235 SWALL:Q8XYE8 (EMBL:AL646066) (2380 aa) fasta scores: E(): 1.5e-46, 29.7% id in 2013 aa; multifunctional polyketide-peptide syntase 437384 3096234 BPSS0311 Burkholderia pseudomallei K96243 multifunctional polyketide-peptide syntase YP_110331.1 428856 R 272560 CDS YP_110332.1 53721347 3096235 438602..439306 1 NC_006351.1 Similar to Vibrio anguillarum transcriptional activator protein VanR SWALL:VANR_VIBAN (SWALL:P74946) (240 aa) fasta scores: E(): 2e-21, 34.32% id in 201 aa, and to Ralstonia solanacearum transcriptional activator protein SolR or rsc3287 or rs02516 SWALL:SLR1_RALSO (SWALL:P58590) (236 aa) fasta scores: E(): 2.2e-22, 37.76% id in 233 aa; LuxR family transcriptional regulator 439306 3096235 BPSS0312 Burkholderia pseudomallei K96243 LuxR family transcriptional regulator YP_110332.1 438602 D 272560 CDS YP_110333.1 53721348 3095365 439636..440475 1 NC_006351.1 Similar to Pasteurella haemolytica outer membrane lipoprotein 2 precursor PlpB SWALL:PLPB_PASHA (SWALL:Q08869) (276 aa) fasta scores: E(): 4.2e-28, 40.69% id in 231 aa, and to Escherichia coli O157:H7 D-methionine-binding lipoprotein precursor MetQ or z0209 or ecs0199 SWALL:Q8X8V9 (EMBL:AE005195) (271 aa) fasta scores: E(): 4.8e-28, 40.24% id in 246 aa; lipoprotein 440475 3095365 BPSS0313 Burkholderia pseudomallei K96243 lipoprotein YP_110333.1 439636 D 272560 CDS YP_110334.1 53721349 3096112 440493..441887 1 NC_006351.1 Similar to Rhodococcus sp. dibenzothiophene desulfurization enzyme A SoxA or DdszA SWALL:SOXA_RHOSG (SWALL:P54995) (453 aa) fasta scores: E(): 5.2e-52, 38.32% id in 454 aa; monooxygenase 441887 3096112 BPSS0314 Burkholderia pseudomallei K96243 monooxygenase YP_110334.1 440493 D 272560 CDS YP_110335.1 53721350 3096113 441956..443098 1 NC_006351.1 Similar to Escherichia coli D-methionine transport ATP-binding protein MetN or Abc or b0199 SWALL:METN_ECOLI (SWALL:P30750) (343 aa) fasta scores: E(): 6.1e-42, 46.32% id in 354 aa, and to Pseudomonas putida ABC transporter ATP-binding protein pp0220 SWALL:AAN65852 (EMBL:AE016774) (369 aa) fasta scores: E(): 5.1e-52, 53.03% id in 379 aa; ABC transporter ATP-binding protein 443098 3096113 BPSS0315 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_110335.1 441956 D 272560 CDS YP_110336.1 53721351 3095909 443091..443747 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable permease of ABC transporter pa2351 SWALL:Q9I1C7 (EMBL:AE004661) (217 aa) fasta scores: E(): 5.6e-52, 68.66% id in 217 aa, and to Brucella melitensis ABC transporter permease bmeii0336 SWALL:Q8YD41 (EMBL:AE009671) (230 aa) fasta scores: E(): 3.7e-47, 62.21% id in 217 aa; ACB transport system, membrane protein 443747 3095909 BPSS0316 Burkholderia pseudomallei K96243 ACB transport system, membrane protein YP_110336.1 443091 D 272560 CDS YP_110337.1 53721352 3096050 444511..445713 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable FMNH2-dependent monooxygenase pa2355 SWALL:Q9I1C3 (EMBL:AE004661) (394 aa) fasta scores: E(): 3.6e-63, 46.03% id in 391 aa, and to Rhodococcus sp. dibenzothiophene desulfurization enzyme C SoxC or DszC SWALL:SOXC_RHOSO (SWALL:P54998) (417 aa) fasta scores: E(): 5.9e-34, 41.04% id in 402 aa; monooxygenase 445713 3096050 BPSS0317 Burkholderia pseudomallei K96243 monooxygenase YP_110337.1 444511 D 272560 CDS YP_110338.1 53721353 3096051 complement(445815..446642) 1 NC_006351.1 hypothetical protein 446642 3096051 BPSS0318 Burkholderia pseudomallei K96243 hypothetical protein YP_110338.1 445815 R 272560 CDS YP_110339.1 53721354 3096268 complement(446938..447537) 1 NC_006351.1 hypothetical protein 447537 3096268 BPSS0319 Burkholderia pseudomallei K96243 hypothetical protein YP_110339.1 446938 R 272560 CDS YP_110340.1 53721355 3095999 complement(447574..448293) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 pyruvate dehydrogenase complex repressor PdhR or GenA or AceC or b0113 or c0140 or z0123 or ecs0117 SWALL:PDHR_ECOLI (SWALL:P06957) (254 aa) fasta scores: E(): 3.5e-24, 39.48% id in 233 aa, and to Yersinia pestis transcriptional regulator for pyruvate dehydrogenase complex y0766 SWALL:AAM84353 (EMBL:AE013678) (278 aa) fasta scores: E(): 9.3e-25, 38.75% id in 240 aa; GntR family transcriptional regulator 448293 3095999 BPSS0320 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_110340.1 447574 R 272560 CDS YP_110341.1 53721356 3096000 448742..449548 1 NC_006351.1 Similar to Escherichia coli hypothetical protein YkgE or b0306 SWALL:YKGE_ECOLI (SWALL:P77252) (239 aa) fasta scores: E(): 5.7e-35, 43.03% id in 237 aa, and to Ralstonia solanacearum hypothetical protein rsc1611 or rs03974 SWALL:Q8XYZ5 (EMBL:AL646065) (241 aa) fasta scores: E(): 5.5e-50, 56.25% id in 240 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 449548 3096000 BPSS0321 Burkholderia pseudomallei K96243 hypothetical protein YP_110341.1 448742 D 272560 CDS YP_110342.1 53721357 3096214 449545..450993 1 NC_006351.1 Similar to Ralstonia solanacearum iron-sulfur binding protein rsc1612 or rs03975 SWALL:Q8XYZ4 (EMBL:AL646065) (469 aa) fasta scores: E(): 3.2e-76, 46.45% id in 465 aa, and to Pasteurella multocida hypothetical protein pm1854 SWALL:Q9CJY4 (EMBL:AE006223) (467 aa) fasta scores: E(): 9.4e-67, 41.59% id in 464 aa; iron-sulfur binding protein 450993 3096214 BPSS0322 Burkholderia pseudomallei K96243 iron-sulfur binding protein YP_110342.1 449545 D 272560 CDS YP_110343.1 53721358 3096204 450990..451715 1 NC_006351.1 C-terminus is similar to the C-terminal regions of Ralstonia solanacearum transmembrane protein rsc1032 or rs04218 SWALL:Q8Y0L1 (EMBL:AL646062) (243 aa) fasta scores: E(): 7.3e-15, 41.11% id in 180 aa, and Bacillus subtilis YvbY protein SWALL:O32259 (EMBL:Z99121) (240 aa) fasta scores: E(): 3.6e-07, 30.86% id in 162 aa; hypothetical protein 451715 3096204 BPSS0323 Burkholderia pseudomallei K96243 hypothetical protein YP_110343.1 450990 D 272560 CDS YP_110344.1 53721359 3095424 452083..453801 1 NC_006351.1 Similar to Escherichia coli glycolate permease GlcA or b2975 SWALL:GLCA_ECOLI (SWALL:Q46839) (560 aa) fasta scores: E(): 3.4e-77, 68.47% id in 571 aa, and to Escherichia coli L-lactate permease LldP or LctP or b3603 SWALL:LLDP_ECOLI (SWALL:P33231) (551 aa) fasta scores: E(): 3.5e-65, 59.47% id in 570 aa; glycolate permease 453801 glcA 3095424 glcA Burkholderia pseudomallei K96243 glycolate permease YP_110344.1 452083 D 272560 CDS YP_110345.1 53721360 3096205 454103..454540 1 NC_006351.1 Similar to Escherichia coli hypothetical protein YphA or b2543 SWALL:YPHA_ECOLI (SWALL:P77751) (140 aa) fasta scores: E(): 8.9e-16, 40.32% id in 124 aa, and to Ralstonia solanacearum probable transmembrane protein rsc2500 or rs01095 SWALL:Q8XWH4 (EMBL:AL646070) (136 aa) fasta scores: E(): 2.5e-14, 42.85% id in 119 aa; hypothetical protein 454540 3096205 BPSS0325 Burkholderia pseudomallei K96243 hypothetical protein YP_110345.1 454103 D 272560 CDS YP_110346.1 53721361 3095212 complement(454731..456302) 1 NC_006351.1 Similar (appart from the internal repeat region) the plasmid-borne Streptomyces coelicolor methylenomycin A resistance protein Mmr or scp1.237C SWALL:MMR_STRCO (SWALL:P11545) (475 aa) fasta scores: E(): 7.2e-20, 32.75% id in 464 aa, and to Rhizobium loti probable transporter mll2542 SWALL:Q98I66 (EMBL:AP002999) (505 aa) fasta scores: E(): 8.6e-22, 32.99% id in 494 aa. The effect of the extra internal amino acids on the function of protein is not known; transport-related membrane protein 456302 3095212 BPSS0326 Burkholderia pseudomallei K96243 transport-related membrane protein YP_110346.1 454731 R 272560 CDS YP_110347.1 53721362 3096012 complement(456588..457880) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable MFS transporter pa5370 SWALL:Q9HTJ4 (EMBL:AE004949) (438 aa) fasta scores: E(): 1.6e-109, 66.82% id in 425 aa, and to Agrobacterium tumefaciens MFS permease[proline/betaine] TphA or atu2154 or agr_c_3904 SWALL:Q8UDH1 (EMBL:AE009165) (443 aa) fasta scores: E(): 1.5e-88, 55.76% id in 416 aa; sugar transport-related, membrane protein 457880 3096012 BPSS0327 Burkholderia pseudomallei K96243 sugar transport-related, membrane protein YP_110347.1 456588 R 272560 CDS YP_110348.1 53721363 3096013 complement(458196..459230) 1 NC_006351.1 Similar to Methanothermus fervidus malate/L-sulfolactate dehydrogenase Mdh SWALL:MDH_METFE (SWALL:P16142) (339 aa) fasta scores: E(): 6.7e-22, 31.76% id in 277 aa, and to Pseudomonas aeruginosa hypothetical oxidoreductase pa1252 SWALL:YC52_PSEAE (SWALL:Q9I492) (334 aa) fasta scores: E(): 5.2e-77, 61.56% id in 333 aa; malate/L-lactate dehydrogenase 459230 3096013 BPSS0328 Burkholderia pseudomallei K96243 malate/L-lactate dehydrogenase YP_110348.1 458196 R 272560 CDS YP_110349.1 53721364 3095117 complement(459223..460815) 1 NC_006351.1 Similar to Caulobacter crescentus fatty aldehyde dehydrogenase cc2791 SWALL:Q9A4N9 (EMBL:AE005944) (528 aa) fasta scores: E(): 6.8e-120, 65.7% id in 522 aa, and to Vibrio harveyi fatty aldehyde dehydrogenase AldH SWALL:DHAF_VIBHA (SWALL:Q56694) (510 aa) fasta scores: E(): 1.5e-76, 47.22% id in 504 aa. Note: Also similar to BPSS0034 (527 aa) fasta scores: E(): 7.3e-87, 60.803% identity in 523 aa overlap; fatty aldehyde dehydrogenase 460815 3095117 BPSS0329 Burkholderia pseudomallei K96243 fatty aldehyde dehydrogenase YP_110349.1 459223 R 272560 CDS YP_110350.1 53721365 3096902 complement(460891..462516) 1 NC_006351.1 Similar to Xanthomonas campestris amino acid permease YveA or xcc2406 SWALL:AAM41684 (EMBL:AE012351) (528 aa) fasta scores: E(): 4.7e-138, 70.19% id in 520 aa, and to Ralstonia solanacearum probable amino-acid permease transmembrane protein rsp0282 or rs03682 SWALL:Q8XT33 (EMBL:AL646077) (543 aa) fasta scores: E(): 4.4e-69, 38.47% id in 512 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; amino-acid permease membrane protein 462516 3096902 BPSS0330 Burkholderia pseudomallei K96243 amino-acid permease membrane protein YP_110350.1 460891 R 272560 CDS YP_110351.1 53721366 3096903 complement(462961..463881) 1 NC_006351.1 Similar to Prochlorococcus marinus dihydrodipicolinate synthase DapA SWALL:DAPA_PROMA (SWALL:P49423) (302 aa) fasta scores: E(): 1.1e-19, 30.24% id in 291 aa, and to Pseudomonas aeruginosa probable dihydrodipicolinate synthetase pa1254 SWALL:Q9I490 (EMBL:AE004555) (305 aa) fasta scores: E(): 3.3e-92, 73.52% id in 306 aa; dihydrodipicolinate synthase 463881 3096903 BPSS0331 Burkholderia pseudomallei K96243 dihydrodipicolinate synthase YP_110351.1 462961 R 272560 CDS YP_110352.1 53721367 3097013 464132..465064 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1268 SWALL:Q9I476 (EMBL:AE004556) (314 aa) fasta scores: E(): 1.1e-84, 71.79% id in 312 aa, and to Xanthomonas axonopodis hypothetical protein xac2550 SWALL:AAM37401 (EMBL:AE011895) (312 aa) fasta scores: E(): 5e-64, 57.82% id in 313 aa; hydroxyproline-2-epimerase 465064 3097013 BPSS0332 Burkholderia pseudomallei K96243 hydroxyproline-2-epimerase YP_110352.1 464132 D 272560 CDS YP_110353.1 53721368 3096960 465061..466194 1 NC_006351.1 Similar to Xanthomonas campestris D-amino acid oxidase xcc2414 SWALL:AAM41692 (EMBL:AE012352) (389 aa) fasta scores: E(): 7.1e-63, 53.84% id in 364 aa, and to Rhizobium meliloti opine oxidase subunit B OoxB SWALL:OOB2_RHIME (SWALL:P72299) (371 aa) fasta scores: E(): 1.2e-08, 26.24% id in 381 aa; oxidase 466194 3096960 BPSS0333 Burkholderia pseudomallei K96243 oxidase YP_110353.1 465061 D 272560 CDS YP_110354.1 53721369 3096961 466191..466424 1 NC_006351.1 Similar to Xanthomonas campestris sarcosine oxidase alpha subunit SoxA or xcc2413 SWALL:AAM41691 (EMBL:AE012352) (81 aa) fasta scores: E(): 3.1e-08, 48.61% id in 72 aa, and to Pseudomonas aeruginosa hydrogen cyanide synthase HcnA or pa2193 SWALL:Q9REV9 (EMBL:AF208523) (104 aa) fasta scores: E(): 1.3e-07, 45.33% id in 75 aa; oxidase 466424 3096961 BPSS0334 Burkholderia pseudomallei K96243 oxidase YP_110354.1 466191 D 272560 CDS YP_110355.1 53721370 3096328 466421..467713 1 NC_006351.1 Similar to Rhizobium meliloti opine oxidase subunit A OoxA or ra1200 or sma2225 SWALL:OOA1_RHIME (SWALL:Q92XP4) (458 aa) fasta scores: E(): 3.2e-06, 32.88% id in 450 aa, and to Xanthomonas campestris oxidoreductase xcc2412 SWALL:AAM41690 (EMBL:AE012352) (444 aa) fasta scores: E(): 4.9e-58, 48.15% id in 434 aa; oxidoreductase 467713 3096328 BPSS0335 Burkholderia pseudomallei K96243 oxidoreductase YP_110355.1 466421 D 272560 CDS YP_110356.1 53721371 3095560 467905..468621 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1261 SWALL:Q9I483 (EMBL:AE004555) (224 aa) fasta scores: E(): 6.8e-51, 58.48% id in 224 aa, and to Xanthomonas axonopodis transcriptional regulator xac2551 SWALL:Q8PJI0 (EMBL:AE011895) (226 aa) fasta scores: E(): 1.5e-38, 45.53% id in 224 aa; AraC family transcriptional regulator 468621 3095560 BPSS0336 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110356.1 467905 D 272560 CDS YP_110357.1 53721372 3095561 complement(468818..469087) 1 NC_006351.1 hypothetical protein 469087 3095561 BPSS0337 Burkholderia pseudomallei K96243 hypothetical protein YP_110357.1 468818 R 272560 CDS YP_110358.2 229269503 3096273 complement(469303..470583) 1 NC_006351.1 Similar to Shigella flexneri transposase for IS110 s0128 SWALL:Q9AFS5 (EMBL:AF348706) (398 aa) fasta scores: E(): 3e-111, 76.73% id in 404 aa, and to Streptomyces coelicolor insertion element IS110 hypothetical 43.6 kDa protein SWALL:YIS1_STRCO (SWALL:P19780) (405 aa) fasta scores: E(): 3.9e-75, 58.71% id in 390 aa. Note: Also similar to BPSS1472 (428 aa) fasta scores: E(): 9.1e-117, 88.732% identity in 426 aa overlap; insertion element protein 470583 3096273 BPSS0338 Burkholderia pseudomallei K96243 insertion element protein YP_110358.2 469303 R 272560 CDS YP_110359.1 53721374 3096498 complement(470668..472722) 1 NC_006351.1 Similar to Pseudomonas putida 4-hydroxyphenylpyruvate dioxygenase, pp2554 SWALL:AAN68163 (EMBL:AE016783) (635 aa) fasta scores: E(): 2.8e-61, 53.44% id in 683 aa. CDS contains region with additional internal amino acids (residues 272 to 338) in comparison to orthologues; amino acid dioxygenase 472722 3096498 BPSS0339 Burkholderia pseudomallei K96243 amino acid dioxygenase YP_110359.1 470668 R 272560 CDS YP_110360.1 53721375 3097223 472982..473437 1 NC_006351.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 473437 aroQ2 3097223 aroQ2 Burkholderia pseudomallei K96243 3-dehydroquinate dehydratase YP_110360.1 472982 D 272560 CDS YP_110361.1 53721376 3096311 473434..474288 1 NC_006351.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 474288 aroE 3096311 aroE Burkholderia pseudomallei K96243 shikimate 5-dehydrogenase YP_110361.1 473434 D 272560 CDS YP_110362.1 53721377 3096499 474336..475682 1 NC_006351.1 Similar to Ralstonia solanacearum glucarate transporter GudP or rsp0828 or rs05367 SWALL:Q8XRK3 (EMBL:AL646081) (450 aa) fasta scores: E(): 9.1e-73, 44.14% id in 444 aa, and to Escherichia coli, and Escherichia coli O6 D-galactonate transporter DgoT or b3691 or c4612 SWALL:DGOT_ECOLI (SWALL:P31457) (430 aa) fasta scores: E(): 9.8e-71, 46.26% id in 428 aa; sugar transport-related, membrane protein 475682 3096499 BPSS0342 Burkholderia pseudomallei K96243 sugar transport-related, membrane protein YP_110362.1 474336 D 272560 CDS YP_110363.1 53721378 3095699 complement(476085..477194) 1 NC_006351.1 catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate; 2-aminoethylphosphonate--pyruvate transaminase 477194 3095699 BPSS0343 Burkholderia pseudomallei K96243 2-aminoethylphosphonate--pyruvate transaminase YP_110363.1 476085 R 272560 CDS YP_110364.1 53721379 3096021 477432..478514 1 NC_006351.1 Similar to Salmonella typhi probable periplasmic binding component of 2-aminoethylphosphonate transporter PhnS or sty0468 SWALL:Q8Z8W7 (EMBL:AL627266) (337 aa) fasta scores: E(): 1.8e-31, 37.03% id in 324 aa, and to Pyrococcus furiosus solute binding lipoprotein pf1751 SWALL:Q9HH27 (EMBL:AF307052) (357 aa) fasta scores: E(): 2.2e-19, 29.26% id in 352 aa; hypothetical protein 478514 3096021 BPSS0344 Burkholderia pseudomallei K96243 hypothetical protein YP_110364.1 477432 D 272560 CDS YP_110365.1 53721380 3096022 478571..479668 1 NC_006351.1 Similar to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase AfuC or atu4786 or agr_l_193 SWALL:Q8U6M1 (EMBL:AE009407) (353 aa) fasta scores: E(): 7e-41, 40.4% id in 349 aa, and to Brucella melitensis iron(III)-transport ATP-binding protein bmeii0567 SWALL:Q8YCG3 (EMBL:AE009693) (353 aa) fasta scores: E(): 2.6e-40, 44.59% id in 305 aa; ABC transporter ATP-binding protein 479668 3096022 BPSS0345 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_110365.1 478571 D 272560 CDS YP_110366.1 53721381 3095966 479646..480593 1 NC_006351.1 Similar to Salmonella typhimurium PhnU or stm0427 SWALL:P96064 (EMBL:U69493) (286 aa) fasta scores: E(): 5.1e-28, 36.78% id in 261 aa, and to Brucella melitensis iron(III)-transport system permease bmeii0585 SWALL:Q8YCE6 (EMBL:AE009695) (448 aa) fasta scores: E(): 2.7e-14, 32.28% id in 285 aa. CDS is extended at the N-terminus in comparison to orthologues; ABC transporter membrane protein 480593 3095966 BPSS0346 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_110366.1 479646 D 272560 CDS YP_110367.1 53721382 3096002 480583..481437 1 NC_006351.1 Similar to Salmonella typhimurium PhnV or stm0426 SWALL:P96065 (EMBL:U69493) (265 aa) fasta scores: E(): 2.7e-22, 34.97% id in 243 aa, and to Rhizobium meliloti spermidine putrescine ABC transporter permease PotC or rb0779 or smb21275 SWALL:Q92VC9 (EMBL:AL603644) (259 aa) fasta scores: E(): 5.8e-13, 30.54% id in 239 aa; ABC transporter membrane protein 481437 3096002 BPSS0347 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_110367.1 480583 D 272560 CDS YP_110368.1 53721383 3096003 481481..482752 1 NC_006351.1 Similar to Pseudomonas fluorescens phosphonoacetate hydrolase PhnA SWALL:Q51782 (EMBL:L49465) (407 aa) fasta scores: E(): 1.5e-94, 60.48% id in 410 aa, and to Rhizobium meliloti phosphonoacetate hydrolase rb0978 or smb21538 SWALL:Q92UV8 (EMBL:AL603645) (424 aa) fasta scores: E(): 3.1e-85, 56.06% id in 412 aa; phosphonoacetate hydrolase 482752 3096003 BPSS0348 Burkholderia pseudomallei K96243 phosphonoacetate hydrolase YP_110368.1 481481 D 272560 CDS YP_110369.1 53721384 3095849 482758..484203 1 NC_006351.1 Similar to Streptococcus mutans NADP-dependent glyceraldehyde-3-phosphate dehydrogenase GapN or smu.676 SWALL:GAPN_STRMU (SWALL:Q59931) (475 aa) fasta scores: E(): 3.5e-48, 35.32% id in 453 aa, and to Methanobacterium thermoautotrophicum NADP-dependent glyceraldehyde-3-phosphate dehydrogenase mth978 SWALL:O27059 (EMBL:AE000871) (455 aa) fasta scores: E(): 8.9e-58, 42.3% id in 442 aa. Note: Also similar to BPSS0607 (491 aa) fasta scores: E(): 2.8e-91, 59.244% identity in 476 aa overlap; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 484203 3095849 BPSS0349 Burkholderia pseudomallei K96243 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase YP_110369.1 482758 D 272560 CDS YP_110370.1 53721385 3097096 484208..484759 1 NC_006351.1 Similar to Anabaena sp. hypothetical protein all2220 SWALL:Q8YUW1 (EMBL:AP003588) (186 aa) fasta scores: E(): 2.9e-29, 47.54% id in 183 aa, and to Pseudomonas aeruginosa hypothetical protein pa2804 SWALL:Q9I039 (EMBL:AE004707) (193 aa) fasta scores: E(): 1.4e-25, 49.71% id in 175 aa; hypothetical protein 484759 3097096 BPSS0350 Burkholderia pseudomallei K96243 hypothetical protein YP_110370.1 484208 D 272560 CDS YP_110371.1 53721386 3097097 491060..491464 1 NC_006351.1 Similar to Escherichia coli transcriptional regulator CueR or b0487 SWALL:CUER_ECOLI (SWALL:P77565) (135 aa) fasta scores: E(): 4.6e-18, 44.27% id in 131 aa, and to Rhizobium meliloti transcriptional regulator HmrR SWALL:HMRR_RHIME (SWALL:Q9X5X4) (147 aa) fasta scores: E(): 1.9e-30, 65.35% id in 127 aa; MerR family transcriptional regulator 491464 3097097 BPSS0351 Burkholderia pseudomallei K96243 MerR family transcriptional regulator YP_110371.1 491060 D 272560 CDS YP_110372.1 53721387 3096091 complement(492322..493167) 1 NC_006351.1 Similar to Escherichia coli hypothetical protein YhiR or b3499 SWALL:YHIR_ECOLI (SWALL:P37634) (280 aa) fasta scores: E(): 7.5e-46, 48.28% id in 263 aa, and to Ralstonia solanacearum hypothetical protein rsc3368 or rs02643 SWALL:Q8XU26 (EMBL:AL646075) (285 aa) fasta scores: E(): 1.4e-73, 62.1% id in 285 aa; hypothetical protein 493167 3096091 BPSS0352 Burkholderia pseudomallei K96243 hypothetical protein YP_110372.1 492322 R 272560 CDS YP_110373.1 53721388 3095964 complement(493316..494287) 1 NC_006351.1 Similar to the C-terminal region of Homo sapiens voltage-gated potassium channel beta-2 subunit KCNAB2 or KCNA2b or KCNK2 SWALL:KVB2_HUMAN (SWALL:Q13303) (367 aa) fasta scores: E(): 4.2e-56, 45.79% id in 321 aa, and to Xanthomonas campestris voltage-gated potassium channel beta subunit XCC0766 SWALL:AAM40081 (EMBL:AE012176) (322 aa) fasta scores: E(): 5.7e-62, 52.97% id in 319 aa; potassium channel subunit 494287 3095964 BPSS0353 Burkholderia pseudomallei K96243 potassium channel subunit YP_110373.1 493316 R 272560 CDS YP_110374.1 53721389 3095965 494475..495263 1 NC_006351.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 495263 3095965 BPSS0354 Burkholderia pseudomallei K96243 3-hydroxybutyrate dehydrogenase YP_110374.1 494475 D 272560 CDS YP_110375.1 53721390 3095099 complement(495489..496688) 1 NC_006351.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 496688 tyrB 3095099 tyrB Burkholderia pseudomallei K96243 aromatic amino acid aminotransferase YP_110375.1 495489 R 272560 CDS YP_110376.1 53721391 3096546 496976..499066 1 NC_006351.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 499066 uvrB 3096546 uvrB Burkholderia pseudomallei K96243 excinuclease ABC subunit B YP_110376.1 496976 D 272560 CDS YP_110377.1 53721392 3096107 499290..499841 1 NC_006351.1 Similar to Brucella melitensis 19 kDa periplasmic protein bmeii0885 SWALL:Q8YBL4 (EMBL:AE009722) (185 aa) fasta scores: E(): 2.8e-42, 61.62% id in 185 aa, and to Brucella suis membrane antigen, bra0381 SWALL:AAN33579 (EMBL:AE014537) (182 aa) fasta scores: E(): 4.4e-42, 67.27% id in 165 aa; hypothetical protein 499841 3096107 BPSS0357 Burkholderia pseudomallei K96243 hypothetical protein YP_110377.1 499290 D 272560 CDS YP_110378.1 53721393 3095949 499901..500230 1 NC_006351.1 Similar to Brucella melitensis hypothetical protein bmeii0884 SWALL:Q8YBL5 (EMBL:AE009722) (124 aa) fasta scores: E(): 2.2e-13, 46.29% id in 108 aa, and to Rickettsia conorii hypothetical protein rc0541 SWALL:Q92I79 (EMBL:AE008615) (126 aa) fasta scores: E(): 2.7e-07, 38.27% id in 81 aa; hypothetical protein 500230 3095949 BPSS0358 Burkholderia pseudomallei K96243 hypothetical protein YP_110378.1 499901 D 272560 CDS YP_110379.1 53721394 3095950 500290..501132 1 NC_006351.1 Similar to Escherichia coli hypothetical protein YcdN or b1016/b1017 SWALL:YCDN_ECOLI (SWALL:P75901) (276 aa) fasta scores: E(): 5e-17, 30.28% id in 284 aa, and to Brucella melitensis high-affinity iron permease bmeii0883 SWALL:Q8YBL6 (EMBL:AE009722) (278 aa) fasta scores: E(): 6.8e-49, 53.58% id in 265 aa; hypothetical protein 501132 3095950 BPSS0359 Burkholderia pseudomallei K96243 hypothetical protein YP_110379.1 500290 D 272560 CDS YP_110380.1 53721395 3095758 501129..502529 1 NC_006351.1 Similar to Brucella melitensis nitrogen fixation protein VnfA bmeii0882 SWALL:Q8YBL7 (EMBL:AE009722) (457 aa) fasta scores: E(): 3.1e-104, 54.08% id in 453 aa, and to the C-terminal region of Anabaena sp. nitrogen assimilation regulatory protein all3558 SWALL:Q8YR90 (EMBL:AP003593) (841 aa) fasta scores: E(): 7.5e-11, 27.25% id in 466 aa; hypothetical protein 502529 3095758 BPSS0360 Burkholderia pseudomallei K96243 hypothetical protein YP_110380.1 501129 D 272560 CDS YP_110381.1 53721396 3096720 502589..502999 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O6 protein GlcG or b2977 or c3706 SWALL:GLCG_ECOLI (SWALL:P45504) (134 aa) fasta scores: E(): 1.9e-20, 49.24% id in 132 aa, and to Pseudomonas aeruginosa hypothetical protein pa5352 SWALL:Q9HTK6 (EMBL:AE004947) (133 aa) fasta scores: E(): 6.9e-22, 53.38% id in 133 aa; hypothetical protein 502999 3096720 BPSS0361 Burkholderia pseudomallei K96243 hypothetical protein YP_110381.1 502589 D 272560 CDS YP_110382.1 53721397 3096721 complement(503302..503565) 1 NC_006351.1 Low similarity to Ralstonia solanacearum hemin uptake protein HemP or rsc1966 or rs03540 SWALL:Q8XXZ7 (EMBL:AL646067) (92 aa) fasta scores: E(): 0.0018, 39.02% id in 82 aa; hypothetical protein 503565 3096721 BPSS0362 Burkholderia pseudomallei K96243 hypothetical protein YP_110382.1 503302 R 272560 CDS YP_110383.1 53721398 3095788 complement(503709..504194) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1364 or rs04646 SWALL:Q8XZN1 (EMBL:AL646064) (156 aa) fasta scores: E(): 3.5e-24, 49.67% id in 155 aa, and to Pseudomonas aeruginosa hypothetical protein pa1206 SWALL:Q9I4D2 (EMBL:AE004550) (157 aa) fasta scores: E(): 6e-14, 38.81% id in 152 aa; hypothetical protein 504194 3095788 BPSS0363 Burkholderia pseudomallei K96243 hypothetical protein YP_110383.1 503709 R 272560 CDS YP_110384.1 53721399 3095894 complement(504313..505185) 1 NC_006351.1 Similar to Streptomyces coelicolor possible chromosome condensation protein sco3798 or scac2.06C SWALL:Q9F320 (EMBL:AL939117) (325 aa) fasta scores: E(): 1.5e-47, 45.39% id in 293 aa, and to Lycopersicon esculentum pirin-like protein SWALL:PIRL_LYCES (SWALL:Q9SEE4) (291 aa) fasta scores: E(): 4.2e-45, 45.93% id in 283 aa; chromosome condensation protein 505185 3095894 BPSS0364 Burkholderia pseudomallei K96243 chromosome condensation protein YP_110384.1 504313 R 272560 CDS YP_110385.1 53721400 3095895 505308..506279 1 NC_006351.1 Similar to Xanthomonas axonopodis transcriptional regulator xac1655 SWALL:AAM36523 (EMBL:AE011797) (333 aa) fasta scores: E(): 1.4e-49, 45.39% id in 315 aa, and to Yersinia pestis lysr-family transcriptional regulatory protein ypo2150 SWALL:Q8ZEL4 (EMBL:AJ414151) (301 aa) fasta scores: E(): 4.5e-45, 43.33% id in 300 aa. Note: This CDS contains two possible alternative start codons at residues 8 or 18; LysR family transcriptional regulator 506279 3095895 BPSS0365 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110385.1 505308 D 272560 CDS YP_110386.1 53721401 3096354 complement(506662..507084) 1 NC_006351.1 Similar to Xanthomonas campestris biopolymer transport protein ExbD1 or xcc0010 SWALL:EXB1_XANCP (SWALL:O34259) (140 aa) fasta scores: E(): 4.8e-18, 43.18% id in 132 aa, and to Ralstonia solanacearum probable biopolymer transport transmembrane protein rsc1965 or rs03539 SWALL:Q8XXZ8 (EMBL:AL646067) (137 aa) fasta scores: E(): 4.7e-30, 61.76% id in 136 aa; biopolymer transport protein 507084 3096354 BPSS0366 Burkholderia pseudomallei K96243 biopolymer transport protein YP_110386.1 506662 R 272560 CDS YP_110387.1 53721402 3096503 complement(507104..507832) 1 NC_006351.1 Similar to Xanthomonas campestris biopolymer transport protein ExbB or xcc0009 SWALL:EXBB_XANCP (SWALL:O34260) (253 aa) fasta scores: E(): 1.3e-30, 42.46% id in 219 aa, and to Pseudomonas aeruginosa TolQ protein or pa0969 SWALL:TOLQ_PSEAE (SWALL:P50598) (231 aa) fasta scores: E(): 1.7e-15, 30.95% id in 210 aa; bipolymer transport protein 507832 3096503 BPSS0367 Burkholderia pseudomallei K96243 bipolymer transport protein YP_110387.1 507104 R 272560 CDS YP_110388.1 53721403 3096504 complement(507869..508564) 1 NC_006351.1 Similar to Ralstonia solanacearum probable TonB transmembrane protein or rsc1963 or rs03537 SWALL:Q8XY00 (EMBL:AL646067) (221 aa) fasta scores: E(): 5.8e-10, 35.71% id in 238 aa, and to Bordetella bronchiseptica TonB SWALL:Q9ZG18 (EMBL:AF087669) (268 aa) fasta scores: E(): 2.4e-06, 33.86% id in 251 aa; TonB-like transport protein 508564 3096504 BPSS0368 Burkholderia pseudomallei K96243 TonB-like transport protein YP_110388.1 507869 R 272560 CDS YP_110389.1 53721404 3095842 complement(508840..509079) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O6 bacterioferritin-associated ferredoxin Bfd or b3337 or c4108 SWALL:BFD_ECOLI (SWALL:P13655) (64 aa) fasta scores: E(): 0.002, 35.84% id in 53 aa, and to Ralstonia solanacearum bacterioferritin-associated ferredoxin protein rsc0349 or rs03316 SWALL:Q8Y2I7 (EMBL:AL646058) (91 aa) fasta scores: E(): 6.3e-07, 45.45% id in 55 aa. CDS is extended at the C-terminus in comparison to orthologues; bacterioferritin ferredoxin protein 509079 3095842 BPSS0369 Burkholderia pseudomallei K96243 bacterioferritin ferredoxin protein YP_110389.1 508840 R 272560 CDS YP_110390.1 53721405 3096298 complement(509211..510083) 1 NC_006351.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 510083 3096298 BPSS0370 Burkholderia pseudomallei K96243 glutamate racemase YP_110390.1 509211 R 272560 CDS YP_110391.1 53721406 3097235 complement(510130..510606) 1 NC_006351.1 Similar to Azotobacter vinelandii bacterioferritin Bfr SWALL:BFR_AZOVI (SWALL:P22759) (156 aa) fasta scores: E(): 3.7e-38, 68.83% id in 154 aa, and to Serratia marcescens bacterioferritin Bfr SWALL:BFR_SERMA (SWALL:O68935) (159 aa) fasta scores: E(): 1.2e-32, 59.74% id in 154 aa; bacterioferritin 510606 bfr 3097235 bfr Burkholderia pseudomallei K96243 bacterioferritin YP_110391.1 510130 R 272560 CDS YP_110392.1 53721407 3096299 complement(510761..512296) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O6 fumarate hydratase class I, aerobic FumA or b1612 or c2004 SWALL:FUMA_ECOLI (SWALL:P00923) (547 aa) fasta scores: E(): 1.1e-29, 33.89% id in 472 aa, and to Ralstonia solanacearum probable fumarate hydratase rsc1955 or rs03529 SWALL:Q8XY08 (EMBL:AL646067) (507 aa) fasta scores: E(): 1.3e-168, 85.51% id in 511 aa; fumarate hydratase 512296 3096299 BPSS0372 Burkholderia pseudomallei K96243 fumarate hydratase YP_110392.1 510761 R 272560 CDS YP_110393.1 53721408 3094938 complement(512336..512944) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YqhA or b3002 or z4355 or ecs3886 SWALL:YQHA_ECOLI (SWALL:P52082) (164 aa) fasta scores: E(): 8.3e-22, 37.65% id in 162 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1954 or rs03528 SWALL:Q8XY09 (EMBL:AL646067) (179 aa) fasta scores: E(): 6.6e-50, 78.78% id in 165 aa; hypothetical protein 512944 3094938 BPSS0373 Burkholderia pseudomallei K96243 hypothetical protein YP_110393.1 512336 R 272560 CDS YP_110394.1 53721409 3095533 complement(513177..514076) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1953 or rs03527 SWALL:Q8XY10 (EMBL:AL646067) (336 aa) fasta scores: E(): 2.9e-71, 66.1% id in 298 aa, and to Bacillus subtilis hypothetical transport protein YetK SWALL:YETK_BACSU (SWALL:O31540) (330 aa) fasta scores: E(): 2.6e-32, 33.55% id in 295 aa; hypothetical protein 514076 3095533 BPSS0374 Burkholderia pseudomallei K96243 hypothetical protein YP_110394.1 513177 R 272560 CDS YP_110395.1 53721410 3095797 514366..516348 1 NC_006351.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 516348 acoE 3095797 acoE Burkholderia pseudomallei K96243 acetyl-CoA synthetase YP_110395.1 514366 D 272560 CDS YP_110396.1 53721411 3095534 516446..516826 1 NC_006351.1 hypothetical protein 516826 3095534 BPSS0376 Burkholderia pseudomallei K96243 hypothetical protein YP_110396.1 516446 D 272560 CDS YP_110397.1 53721412 3095646 516820..518835 1 NC_006351.1 Similar to Ralstonia solanacearum probable solute:Na+ symporter permease transmembrane protein rsc1951 or rs03525 SWALL:Q8XY12 (EMBL:AL646067) (688 aa) fasta scores: E(): 2.8e-156, 62.25% id in 673 aa, and to Alcaligenes eutrophus hypothetical protein in acoE 3'region SWALL:YACO_ALCEU (SWALL:P31640) (332 aa) fasta scores: E(): 1e-66, 59.31% id in 322 aa; transport related membrane protein 518835 3095646 BPSS0377 Burkholderia pseudomallei K96243 transport related membrane protein YP_110397.1 516820 D 272560 CDS YP_110398.1 53721413 3095647 519142..520371 1 NC_006351.1 Similar to Escherichia coli prophage CP4-57 integrase IntA or SlpA or IntX or b2622 SWALL:INTA_ECOLI (SWALL:P32053) (413 aa) fasta scores: E(): 2.6e-30, 31.07% id in 399 aa, and to Ralstonia solanacearum integrase prophage protein rsc1896 or rs03460 SWALL:Q8XY67 (EMBL:AL646067) (411 aa) fasta scores: E(): 2.3e-67, 49.59% id in 373 aa; phage integrase 520371 3095647 BPSS0378 Burkholderia pseudomallei K96243 phage integrase YP_110398.1 519142 D 272560 CDS YP_110399.1 53721414 3095528 520625..520948 1 NC_006351.1 hypothetical protein 520948 3095528 BPSS0379 Burkholderia pseudomallei K96243 hypothetical protein YP_110399.1 520625 D 272560 CDS YP_110400.1 53721415 3096320 521079..521324 1 NC_006351.1 Similar to Bacillus subtilis BglII control element BglIIC SWALL:Q45487 (EMBL:U49842) (77 aa) fasta scores: E(): 3e-06, 40.98% id in 61 aa, and to Salmonella enterica, and Salmonella paratyphi-A regulatory protein SbaIC SWALL:Q9EZ27 (EMBL:AF508974) (78 aa) fasta scores: E(): 4.9e-06, 44.44% id in 72 aa. Note: Also similar to BPSS0381 (82 aa) fasta scores: E(): 2.7e-27, 88.889% identity in 81 aa overlap; DNA-binding regulatory protein 521324 3096320 BPSS0380 Burkholderia pseudomallei K96243 DNA-binding regulatory protein YP_110400.1 521079 D 272560 CDS YP_110401.1 53721416 3096321 complement(521382..521678) 1 NC_006351.1 Doubtful CDS. No significant database matches; hypothetical protein 521678 3096321 BPSS0380A Burkholderia pseudomallei K96243 hypothetical protein YP_110401.1 521382 R 272560 CDS YP_110402.1 53721417 3095898 complement(521774..522100) 1 NC_006351.1 Doubtful CDS. No significant database matches; hypothetical protein 522100 3095898 BPSS0380B Burkholderia pseudomallei K96243 hypothetical protein YP_110402.1 521774 R 272560 CDS YP_110403.1 53721418 3095662 522475..522720 1 NC_006351.1 Similar to Bacillus subtilis BglII control element BglIIC SWALL:Q45487 (EMBL:U49842) (77 aa) fasta scores: E(): 1.2e-05, 37.7% id in 61 aa, and to Salmonella enterica, and Salmonella paratyphi-a regulatory protein SbaIC SWALL:Q9EZ27 (EMBL:AF508974) (78 aa) fasta scores: E(): 1.2e-05, 38.88% id in 72 aa. Note: Also similar to BPSS0380 (82 aa) fasta scores: E(): 6.3e-28, 88.889% identity in 81 aa overlap; DNA-binding regulatory protein 522720 3095662 BPSS0381 Burkholderia pseudomallei K96243 DNA-binding regulatory protein YP_110403.1 522475 D 272560 CDS YP_110404.1 53721419 3095663 complement(522852..525719) 1 NC_006351.1 Similar in its N-terminal region to Escherichia coli DNA primase TraC SWALL:TRC4_ECOLI (SWALL:P27189) (1061 aa) fasta scores: E(): 5.5e-22, 32.87% id in 362 aa, and in its C-terminal region to Salmonella typhimurium inner membrane protein stm2745 SWALL:Q8ZMQ9 (EMBL:AE008824) (689 aa) fasta scores: E(): 2.7e-61, 33.57% id in 691 aa. Note: Also similar to BPSL0082 (956 aa) fasta scores: E(): 0, 91.832% identity in 955 aa overlap; hypothetical protein 525719 3095663 BPSS0382 Burkholderia pseudomallei K96243 hypothetical protein YP_110404.1 522852 R 272560 CDS YP_110405.1 53721420 3096182 complement(526300..526518) 1 NC_006351.1 Similar to Yersinia pestis regulatory protein ypo0878 or y3260 SWALL:Q8ZHL3 (EMBL:AJ414145) (66 aa) fasta scores: E(): 8.5e-05, 42% id in 50 aa, and to Vibrio cholerae transcriptional regulator vc1785 SWALL:Q9KR58 (EMBL:AE004255) (68 aa) fasta scores: E(): 8.8e-05, 37.03% id in 54 aa; DNA-binding protein 526518 3096182 BPSS0383 Burkholderia pseudomallei K96243 DNA-binding protein YP_110405.1 526300 R 272560 CDS YP_110406.1 53721421 3095809 complement(526611..527657) 1 NC_006351.1 hypothetical protein 527657 3095809 BPSS0384 Burkholderia pseudomallei K96243 hypothetical protein YP_110406.1 526611 R 272560 CDS YP_110407.1 53721422 3095810 complement(527939..528640) 1 NC_006351.1 hypothetical protein 528640 3095810 BPSS0384A Burkholderia pseudomallei K96243 hypothetical protein YP_110407.1 527939 R 272560 CDS YP_110408.1 53721423 3096240 529868..532291 1 NC_006351.1 hypothetical protein 532291 3096240 BPSS0385 Burkholderia pseudomallei K96243 hypothetical protein YP_110408.1 529868 D 272560 CDS YP_110409.1 53721424 3096862 532668..533243 1 NC_006351.1 Similar to Escherichia coli transposon tn2501 resolvase TnpR SWALL:TNR0_ECOLI (SWALL:P05823) (194 aa) fasta scores: E(): 6.7e-43, 67.02% id in 188 aa, and to Salmonella typhimurium DNA-invertase Hin or stm2772 SWALL:HIN_SALTY (SWALL:P03013) (190 aa) fasta scores: E(): 4.3e-17, 37.7% id in 183 aa; transposon Tn2501 resolvase 533243 tnpR 3096862 tnpR Burkholderia pseudomallei K96243 transposon Tn2501 resolvase YP_110409.1 532668 D 272560 CDS YP_110410.1 53721425 3095778 complement(533314..534429) 1 NC_006351.1 Similar to Burkholderia thailandensis bacteriophage phiE125 protein Gp31 SWALL:Q8VP95 (EMBL:AY063741) (363 aa) fasta scores: E(): 2.3e-32, 36.74% id in 362 aa; hypothetical protein 534429 3095778 BPSS0387 Burkholderia pseudomallei K96243 hypothetical protein YP_110410.1 533314 R 272560 CDS YP_110411.1 53721426 3095779 complement(534439..535173) 1 NC_006351.1 Similar to Burkholderia thailandensis bacteriophage phiE125 protein Gp30 SWALL:Q8VP96 (EMBL:AY063741) (244 aa) fasta scores: E(): 7.1e-27, 42.04% id in 245 aa; hypothetical protein 535173 3095779 BPSS0388 Burkholderia pseudomallei K96243 hypothetical protein YP_110411.1 534439 R 272560 CDS YP_110412.1 53721427 3096011 complement(535170..535697) 1 NC_006351.1 Similar to Burkholderia thailandensis bacteriophage phiE125 protein Gp29 SWALL:Q8VP97 (EMBL:AY063741) (186 aa) fasta scores: E(): 4.1e-35, 60.77% id in 181 aa; hypothetical protein 535697 3096011 BPSS0389 Burkholderia pseudomallei K96243 hypothetical protein YP_110412.1 535170 R 272560 CDS YP_110413.1 53721428 3096766 535977..536156 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical protein r02039 or smc04441 SWALL:Q92K60 (EMBL:AL591789) (62 aa) fasta scores: E(): 1.9e-11, 61.01% id in 59 aa, and to Clostridium perfringens hypothetical protein pcp27 SWALL:Q93MC0 (EMBL:AP003515) (65 aa) fasta scores: E(): 6.2e-11, 53.44% id in 58 aa; hypothetical protein 536156 3096766 BPSS0390 Burkholderia pseudomallei K96243 hypothetical protein YP_110413.1 535977 D 272560 CDS YP_110414.1 53721429 3096767 536201..536617 1 NC_006351.1 Similar to Bacteriophage HP1 hypothetical 14.9 kDa protein in rep-hol intergenic region SWALL:YO14_BPHP1 (SWALL:P51716) (133 aa) fasta scores: E(): 8.8e-14, 38.34% id in 133 aa, and to Rhizobium loti hypothetical protein mlr2150 SWALL:Q98J17 (EMBL:AP002999) (133 aa) fasta scores: E(): 2.2e-11, 40.32% id in 124 aa; hypothetical protein 536617 3096767 BPSS0391 Burkholderia pseudomallei K96243 hypothetical protein YP_110414.1 536201 D 272560 CDS YP_110415.1 53721430 3095962 complement(537046..537543) 1 NC_006351.1 hypothetical protein 537543 3095962 BPSS0391A Burkholderia pseudomallei K96243 hypothetical protein YP_110415.1 537046 R 272560 CDS YP_110416.1 53721431 3095317 complement(539214..539498) 1 NC_006351.1 C-terminus is similar to the C-terminal region of Rhizobium meliloti hypothetical protein r00618 or smc04432 SWALL:Q92KN5 (EMBL:AL591784) (105 aa) fasta scores: E(): 6.9e-07, 52.63% id in 57 aa. Similar to Yersinia pestis hypothetical protein ypo1882 or y2427 SWALL:Q8ZF36 (EMBL:AJ414150) (96 aa) fasta scores: E(): 1e-06, 41.57% id in 89 aa; hypothetical protein 539498 3095317 BPSS0394 Burkholderia pseudomallei K96243 hypothetical protein YP_110416.1 539214 R 272560 CDS YP_110417.1 53721432 3096308 complement(539482..539703) 1 NC_006351.1 Low similarity in its C-termianl region to Xylella fastidiosa hypothetical protein xf1562 SWALL:Q9PD18 (EMBL:AE003986) (88 aa) fasta scores: E(): 7.9e-07, 52.94% id in 51 aa; hypothetical protein 539703 3096308 BPSS0395 Burkholderia pseudomallei K96243 hypothetical protein YP_110417.1 539482 R 272560 CDS YP_110418.1 53721433 3096309 540323..540598 1 NC_006351.1 Similar to Bacteriophage phiE125 Gp49 SWALL:Q8W6Q1 (EMBL:AF447491) (91 aa) fasta scores: E(): 3.7e-34, 95.6% id in 91 aa; bacteriophage protein Gp49 540598 3096309 BPSS0396 Burkholderia pseudomallei K96243 bacteriophage protein Gp49 YP_110418.1 540323 D 272560 CDS YP_110419.1 53721434 3096131 540608..540739 1 NC_006351.1 Similar to Bacteriophage phiE125 Gp48 SWALL:Q8W6Q2 (EMBL:AF447491) (43 aa) fasta scores: E(): 1.5e-15, 97.67% id in 43 aa; bacteriophage protein Gp48 540739 3096131 BPSS0397 Burkholderia pseudomallei K96243 bacteriophage protein Gp48 YP_110419.1 540608 D 272560 CDS YP_110420.1 53721435 3095709 540741..540848 1 NC_006351.1 hypothetical protein 540848 3095709 BPSS0397A Burkholderia pseudomallei K96243 hypothetical protein YP_110420.1 540741 D 272560 CDS YP_110421.1 53721436 3095710 540875..541096 1 NC_006351.1 hypothetical protein 541096 3095710 BPSS0398 Burkholderia pseudomallei K96243 hypothetical protein YP_110421.1 540875 D 272560 CDS YP_110422.1 53721437 3095803 complement(541081..541347) 1 NC_006351.1 Similar to Bacteriophage phiE125 Gp46 SWALL:Q8W6Q4 (EMBL:AF447491) (84 aa) fasta scores: E(): 2.9e-34, 95.23% id in 84 aa; bacteriophage protein Gp46 541347 3095803 BPSS0399 Burkholderia pseudomallei K96243 bacteriophage protein Gp46 YP_110422.1 541081 R 272560 CDS YP_110423.1 53721438 3096992 complement(541537..542235) 1 NC_006351.1 Low similarity in parts to Bacteriophage phiE125 Gp45 SWALL:Q8W6Q5 (EMBL:AF447491) (217 aa) fasta scores: E(): 0.12, 34.78% id in 115 aa; bacteriophage protein 542235 3096992 BPSS0400 Burkholderia pseudomallei K96243 bacteriophage protein YP_110423.1 541537 R 272560 CDS YP_110424.1 53721439 3096993 542377..542526 1 NC_006351.1 Identical to Bacteriophage phiE125 Gp44 SWALL:Q8W6Q6 (EMBL:AF447491) (49 aa) fasta scores: E(): 8.1e-19, 100% id in 49 aa; bacteriophage protein Gp44 542526 3096993 BPSS0401 Burkholderia pseudomallei K96243 bacteriophage protein Gp44 YP_110424.1 542377 D 272560 CDS YP_110425.1 53721440 3096158 542523..543698 1 NC_006351.1 Probable fusion protein. N-terminal region highly similar to Bacteriophage phiE125 Gp43 SWALL:Q8W6Q7 (EMBL:AF447491) (270 aa) fasta scores: E(): 5e-90, 99.61% id in 258 aa, and C-terminal region to Pseudomonas putida transposase, ORFB pp4420 SWALL:AAN69997 (EMBL:AE016790) (269 aa) fasta scores: E(): 1.3e-18, 48.07% id in 156 aa; N-terminal region highly similar to Bacteriophage phiE125 Gp43 SWALL:Q8W6Q7 (EMBL:AF447491) (270 aa) fasta scores: E(): 5e-90, 99.61% id in 258 aa, and C-terminal region to Pseudomonas putida transposase, ORFB pp4420 SWALL:AAN69997 (EMBL:AE016790) (269 aa) fasta scores: E(): 1.3e-18, 48.07% id in 156 aa; bacteriophage/transposase fusion protein 543698 3096158 BPSS0402 Burkholderia pseudomallei K96243 bacteriophage/transposase fusion protein YP_110425.1 542523 D 272560 CDS YP_110426.1 53721441 3096153 544679..546139 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2492 or rs01104 SWALL:Q8XWI2 (EMBL:AL646070) (502 aa) fasta scores: E(): 1.1e-131, 66.73% id in 490 aa, and N-terminal region to Wolbachia sp. Wri phosphoprotein phosphatase SWALL:Q9RBM2 (EMBL:AJ012073) (428 aa) fasta scores: E(): 7.3e-21, 29.89% id in 368 aa. Note: Also similar to BPSS1331 (516 aa) fasta scores: E(): 1.2e-154, 87.866% identity in 478 aa overlap; hypothetical protein 546139 3096153 BPSS0403 Burkholderia pseudomallei K96243 hypothetical protein YP_110426.1 544679 D 272560 CDS YP_110427.1 53721442 3095078 546190..547560 1 NC_006351.1 Similar to Paracoccus denitrificans methylamine utilization protein precursor MauG SWALL:MAUG_PARDE (SWALL:Q51658) (387 aa) fasta scores: E(): 4.3e-18, 34.41% id in 369 aa, and to Rhizobium loti methylamine utilization protein mlr1826 SWALL:Q98JQ7 (EMBL:AP002998) (437 aa) fasta scores: E(): 1.8e-46, 40.57% id in 419 aa. Possible alternative translational start site; methylamine utilization protein 547560 3095078 BPSS0404 Burkholderia pseudomallei K96243 methylamine utilization protein YP_110427.1 546190 D 272560 CDS YP_110428.1 53721443 3095079 547717..548649 1 NC_006351.1 Similar to Mycobacterium tuberculosis hypothetical protein precursor rv2277c or mt2337 or mtcy339.33 SWALL:YM77_MYCTU (SWALL:Q50687) (301 aa) fasta scores: E(): 2.3e-38, 40.53% id in 301 aa, and to Yersinia pestis exported protein ypo3232 or y0958 SWALL:Q8ZBZ8 (EMBL:AJ414156) (315 aa) fasta scores: E(): 5.7e-29, 49.16% id in 299 aa; glycerophosphoryl diester phosphodiesterase 548649 3095079 BPSS0405 Burkholderia pseudomallei K96243 glycerophosphoryl diester phosphodiesterase YP_110428.1 547717 D 272560 CDS YP_110429.1 53721444 3096291 548847..549050 1 NC_006351.1 No significant database matches. Doubtful CDS; hypothetical protein 549050 3096291 BPSS0406 Burkholderia pseudomallei K96243 hypothetical protein YP_110429.1 548847 D 272560 CDS YP_110430.1 53721445 3096252 549075..549788 1 NC_006351.1 Similar to Rhodobacter capsulatus insertion element SWALL:O68064 (EMBL:AF010496) (191 aa) fasta scores: E(): 4e-49, 68.68% id in 182 aa, and to Ralstonia solanacearum ISrso14-transposase ORFB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 1.7e-11, 34.18% id in 234 aa. Note: Also similar in its N-terminal region to BPSS0661 (276 aa) fasta scores: E(): 5.1e-52, 97.143% identity in 140 aa overlap and in its C-terminal region to BPSS0662 (59 aa) fasta scores: E(): 3.6e-18, 96.429% identity in 56 aa overlap; insertion element hypothetical protein 549788 3096252 BPSS0407 Burkholderia pseudomallei K96243 insertion element hypothetical protein YP_110430.1 549075 D 272560 CDS YP_110431.1 53721446 3096253 complement(549815..550549) 1 NC_006351.1 hypothetical protein 550549 3096253 BPSS0408 Burkholderia pseudomallei K96243 hypothetical protein YP_110431.1 549815 R 272560 CDS YP_110432.1 53721447 3095229 complement(550540..562935) 1 NC_006351.1 hypothetical protein 562935 3095229 BPSS0409 Burkholderia pseudomallei K96243 hypothetical protein YP_110432.1 550540 R 272560 CDS YP_110433.1 53721448 3095739 complement(562919..566497) 1 NC_006351.1 hypothetical protein 566497 3095739 BPSS0410 Burkholderia pseudomallei K96243 hypothetical protein YP_110433.1 562919 R 272560 CDS YP_110434.1 53721449 3095740 complement(566615..567391) 1 NC_006351.1 hypothetical protein 567391 3095740 BPSS0411 Burkholderia pseudomallei K96243 hypothetical protein YP_110434.1 566615 R 272560 CDS YP_110435.1 53721450 3096994 complement(567424..567849) 1 NC_006351.1 hypothetical protein 567849 3096994 BPSS0412 Burkholderia pseudomallei K96243 hypothetical protein YP_110435.1 567424 R 272560 CDS YP_110436.1 53721451 3095519 568385..568792 1 NC_006351.1 hypothetical protein 568792 3095519 BPSS0413 Burkholderia pseudomallei K96243 hypothetical protein YP_110436.1 568385 D 272560 CDS YP_110437.1 53721452 3095520 569031..570743 1 NC_006351.1 Similar to Caulobacter crescentus acetolactate synthase, large subunit cc2100 SWALL:Q9A6J3 (EMBL:AE005883) (582 aa) fasta scores: E(): 3.3e-53, 36.34% id in 575 aa, and to Bacillus subtilis acetolactate synthase large subunit IlvB SWALL:ILVB_BACSU (SWALL:P37251) (573 aa) fasta scores: E(): 7.6e-53, 33.74% id in 572 aa; acetolactate synthase 570743 3095520 BPSS0414 Burkholderia pseudomallei K96243 acetolactate synthase YP_110437.1 569031 D 272560 CDS YP_110438.1 53721453 3097192 complement(570903..573890) 1 NC_006351.1 Similar to Salmonella typhimurium outer membrane lipoprotein YjbH or stm4225 SWALL:Q8ZKI1 (EMBL:AE008897) (698 aa) fasta scores: E(): 2.6e-34, 40.08% id in 726 aa, and to Escherichia coli hypothetical lipoprotein precursor YmcA or b0984 SWALL:YMCA_ECOLI (SWALL:P75882) (698 aa) fasta scores: E(): 4.8e-33, 39.68% id in 693 aa. Note: N-terminal region presents no similarities to any database entries; lipoprotein 573890 3097192 BPSS0415 Burkholderia pseudomallei K96243 lipoprotein YP_110438.1 570903 R 272560 CDS YP_110439.1 53721454 3096119 complement(573892..574536) 1 NC_006351.1 lipoprotein 574536 3096119 BPSS0416 Burkholderia pseudomallei K96243 lipoprotein YP_110439.1 573892 R 272560 CDS YP_110440.1 53721455 3096120 574629..574985 1 NC_006351.1 hypothetical protein 574985 3096120 BPSS0416A Burkholderia pseudomallei K96243 hypothetical protein YP_110440.1 574629 D 272560 CDS YP_110441.1 53721456 3096557 575855..578407 1 NC_006351.1 C-terminus is weakly similar to the C-terinal region of Escherichia coli polysialic acid transport protein precursor KpsD SWALL:KSD1_ECOLI (SWALL:Q03961) (558 aa) fasta scores: E(): 1.4e-09, 25.1% id in 458 aa, and to Shewanella oneidensis polysaccharide biosynthesis protein so3193 SWALL:AAN56193 (EMBL:AE015757) (921 aa) fasta scores: E(): 5.3e-26, 26.41% id in 863 aa; hypothetical protein 578407 3096557 BPSS0417 Burkholderia pseudomallei K96243 hypothetical protein YP_110441.1 575855 D 272560 CDS YP_110442.1 53721457 3095946 578412..579629 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O6 capsule polysaccharide export inner-membrane protein KpsE or c3687 SWALL:KSE5_ECOLI (SWALL:P42214) (382 aa) fasta scores: E(): 0.00055, 22.35% id in 340 aa, and to Ralstonia solanacearum tyrosine-protein kinase EpsB SWALL:EPB2_RALSO (SWALL:Q45409) (750 aa) fasta scores: E(): 7.4e-06, 25.16% id in 302 aa. Note: The N-terminal region does not seem to present any similarities with database entries. Possible alternative translational start site; transport-related membrane protein 579629 3095946 BPSS0418 Burkholderia pseudomallei K96243 transport-related membrane protein YP_110442.1 578412 D 272560 CDS YP_110443.1 53721458 3095925 579626..580402 1 NC_006351.1 Similar to Salmonella typhimurium glucose-1-phosphate cytidylyltransferase RfbF or stm2092 SWALL:RFBF_SALTY (SWALL:P26396) (257 aa) fasta scores: E(): 4e-73, 68.09% id in 257 aa, and to Yersinia enterocolitica DdhA SWALL:Q56860 (EMBL:U46859) (261 aa) fasta scores: E(): 9e-74, 66.14% id in 257 aa; glucose-1-phosphate cytidylyltransferase 580402 rfbF 3095925 rfbF Burkholderia pseudomallei K96243 glucose-1-phosphate cytidylyltransferase YP_110443.1 579626 D 272560 CDS YP_110444.1 53721459 3095700 580405..581478 1 NC_006351.1 Similar to Salmonella typhimurium CDP-glucose 4,6-dehydratase RfbG or stm2091 SWALL:RFBG_SALTY (SWALL:P26397) (359 aa) fasta scores: E(): 2.3e-85, 55.55% id in 351 aa, and to Yersinia pseudotuberculosis CDP-D-glucose-4,6-dehydratase AscB or DdhB SWALL:Q57329 (EMBL:L33181) (357 aa) fasta scores: E(): 8.7e-88, 58.33% id in 348 aa; CDP-glucose 4,6-dehydratase 581478 rfbG 3095700 rfbG Burkholderia pseudomallei K96243 CDP-glucose 4,6-dehydratase YP_110444.1 580405 D 272560 CDS YP_110445.1 53721460 3095701 581486..582838 1 NC_006351.1 Similar to Salmonella typhimurium lipopolysaccharide biosynthesis protein RfbH or stm2090 SWALL:RFBH_SALTY (SWALL:P26398) (437 aa) fasta scores: E(): 4.6e-120, 64.45% id in 436 aa, and to Yersinia pseudotuberculosis, and Yersinia pseudotuberculosis CDP-4-keto-6-deoxy-D-glucose-3-dehydrase DdhC SWALL:Q05341 (EMBL:AF461770) (437 aa) fasta scores: E(): 1.3e-119, 65.13% id in 436 aa; lipopolysaccharide biosynthesis protein 582838 rfbH 3095701 rfbH Burkholderia pseudomallei K96243 lipopolysaccharide biosynthesis protein YP_110445.1 581486 D 272560 CDS YP_110446.1 53721461 3095947 582864..584624 1 NC_006351.1 C-terminal region similar to Escherichia coli, and Escherichia coli O157:H7 perosamine synthetase Per or RfbE or z3200 or ecs2841 SWALL:O07849 (EMBL:AF061251) (366 aa) fasta scores: E(): 3.5e-50, 38.76% id in 356 aa and N-terminal region similar to Agrobacterium tumefaciens acetyltransferase atu2080 or agr_c_3768 SWALL:Q8UDP1 (EMBL:Q8UDP1) (177 aa) blastp scores: Score = 39.9 bits (91), Expect = 0.14 Identities = 46/165 (27%), Positives = 70/165 (41%), Gaps = 18/165 (10%); aminotransferase 584624 3095947 BPSS0422 Burkholderia pseudomallei K96243 aminotransferase YP_110446.1 582864 D 272560 CDS YP_110447.1 53721462 3096628 584873..586228 1 NC_006351.1 Similar to Salmonella enterica hypothetical protein with 12 predicted transmembrane segments which possibly functions in export of O-antigen SWALL:Q00339 (EMBL:X61917) (446 aa) fasta scores: E(): 2e-39, 30.15% id in 441 aa, and to Sphingomonas sp. S88 hypothetical 47.3 kDa protein SpsS SWALL:P74815 (EMBL:U51197) (452 aa) fasta scores: E(): 1.5e-05, 26.01% id in 469 aa; hypothetical protein 586228 3096628 BPSS0423 Burkholderia pseudomallei K96243 hypothetical protein YP_110447.1 584873 D 272560 CDS YP_110448.1 53721463 3096227 586225..587286 1 NC_006351.1 Similar to Salmonella enterica WbaR protein SWALL:Q00337 (EMBL:X61917) (320 aa) fasta scores: E(): 1.1e-15, 32.25% id in 248 aa, and low similarity to Salmonella typhimurium O antigen biosynthesis abequosyltransferase RfbV or stm2087 SWALL:RFBV_SALTY (SWALL:P26401) (333 aa) fasta scores: E(): 0.00069, 26.54% id in 275 aa; glycosyl transferase 587286 3096227 BPSS0424 Burkholderia pseudomallei K96243 glycosyl transferase YP_110448.1 586225 D 272560 CDS YP_110449.1 53721464 3096228 587459..588715 1 NC_006351.1 Similar to Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or Rfa-2 or b3621 SWALL:RFAC_ECOLI (SWALL:P24173) (319 aa) fasta scores: E(): 7.8e-07, 26.45% id in 310 aa, and to Rhizobium loti ADP-heptose-LPS heptosyltransferase mlr2566 SWALL:Q98I51 (EMBL:AP003000) (335 aa) fasta scores: E(): 1.8e-15, 26.87% id in 346 aa; heptosyltransferase (O-antigen related) 588715 3096228 BPSS0425 Burkholderia pseudomallei K96243 heptosyltransferase (O-antigen related) YP_110449.1 587459 D 272560 CDS YP_110450.1 53721465 3095452 588621..589676 1 NC_006351.1 Similar to Escherichia coli WaaQ SWALL:Q9R9D5 (EMBL:AF019746) (340 aa) fasta scores: E(): 4.7e-06, 22.68% id in 335 aa, and to Neisseria gonorrhoeae ADP-heptose:LPS heptosyltransferase II RfaF SWALL:Q51063 (EMBL:Z37141) (336 aa) fasta scores: E(): 5.8e-09, 24.92% id in 349 aa; heptosyltransferase (O-antigen related) 589676 3095452 BPSS0426 Burkholderia pseudomallei K96243 heptosyltransferase (O-antigen related) YP_110450.1 588621 D 272560 CDS YP_110451.1 53721466 3096167 589669..590238 1 NC_006351.1 Similar to Escherichia coli lipopolysaccharide biosynthesis O-acetyl transferase WbbJ or b2033 SWALL:WBBJ_ECOLI (SWALL:P37750) (196 aa) fasta scores: E(): 4.5e-09, 36.06% id in 122 aa, and to Aeromonas hydrophila O-acetyl transferase SWALL:AAM74482 (EMBL:AF148126) (199 aa) fasta scores: E(): 2.2e-11, 31.6% id in 174 aa; O-acetyl transferase 590238 3096167 BPSS0427 Burkholderia pseudomallei K96243 O-acetyl transferase YP_110451.1 589669 D 272560 CDS YP_110452.1 53721467 3096168 590250..591296 1 NC_006351.1 Similar to Salmonella enterica rhamnosyl transferase SWALL:Q00482 (EMBL:X61917) (347 aa) fasta scores: E(): 4.6e-25, 30.03% id in 323 aa, and to Salmonella typhimurium O antigen biosynthesis abequosyltransferase RfbV or stm2087 SWALL:RFBV_SALTY (SWALL:P26401) (333 aa) fasta scores: E(): 0.00046, 23.58% id in 229 aa; glycosyl transferase (O-antigen related) 591296 3096168 BPSS0428 Burkholderia pseudomallei K96243 glycosyl transferase (O-antigen related) YP_110452.1 590250 D 272560 CDS YP_110453.1 53721468 3095791 591300..592349 1 NC_006351.1 hypothetical protein 592349 3095791 BPSS0429 Burkholderia pseudomallei K96243 hypothetical protein YP_110453.1 591300 D 272560 CDS YP_110454.1 53721469 3095206 complement(593393..594292) 1 NC_006351.1 Similar to Pseudomonas putida transcriptional regulator, LysR family pp3811 SWALL:AAN69405 (EMBL:AE016788) (294 aa) fasta scores: E(): 9.2e-52, 50% id in 288 aa, and to Bradyrhizobium japonicum transcriptional regulatory protein blr6553 SWALL:BAC51818 (EMBL:AP005959) (323 aa) fasta scores: E(): 8.9e-39, 41.69% id in 295 aa; LysR family transcriptional regulator 594292 3095206 BPSS0431 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110454.1 593393 R 272560 CDS YP_110455.1 53721470 3095207 594422..595147 1 NC_006351.1 Similar to Escherichia coli protein YhhW or b3439 SWALL:YHHW_ECOLI (SWALL:P46852) (231 aa) fasta scores: E(): 2.7e-42, 49.57% id in 234 aa, and to Xanthomonas axonopodis hypothetical protein xac1747 SWALL:AAM36613 (EMBL:AE011806) (233 aa) fasta scores: E(): 2.7e-52, 58.44% id in 231 aa; hypothetical protein 595147 3095207 BPSS0432 Burkholderia pseudomallei K96243 hypothetical protein YP_110455.1 594422 D 272560 CDS YP_110456.1 53721471 3096715 595429..596109 1 NC_006351.1 Highly similar in its N-terminal region to Rhizobium loti hypothetical protein mlr1837 SWALL:Q98JQ1 (EMBL:AP002998) (143 aa) fasta scores: E(): 2.3e-30, 68.08% id in 141 aa, and similar in its full length to Ralstonia solanacearum permease transmembrane protein rsc0238 or rs00670 SWALL:Q8Y2U4 (EMBL:AL646058) (236 aa) fasta scores: E(): 6.9e-20, 39.42% id in 208 aa; hypothetical protein 596109 3096715 BPSS0433 Burkholderia pseudomallei K96243 hypothetical protein YP_110456.1 595429 D 272560 CDS YP_110457.1 53721472 3096035 complement(596139..597170) 1 NC_006351.1 Low similarity to Xanthomonas axonopodis thioredoxin reductase TrxB or xac1182 SWALL:AAM36054 (EMBL:AE011747) (365 aa) fasta scores: E(): 9.5e-05, 28.67% id in 286 aa; hypothetical protein 597170 3096035 BPSS0434 Burkholderia pseudomallei K96243 hypothetical protein YP_110457.1 596139 R 272560 CDS YP_110458.1 53721473 3096036 597509..598435 1 NC_006351.1 C-terminus is similar to the C-terminal regions of Rhizobium loti probable transcriptional regulator mll0489 SWALL:Q98MP6 (EMBL:AP002995) (313 aa) fasta scores: E(): 5.7e-24, 36.29% id in 259 aa, and Pseudomonas aeruginosa probable transcriptional regulator pa2696 SWALL:Q9I0E6 (EMBL:AE004697) (297 aa) fasta scores: E(): 5.5e-20, 34.07% id in 226 aa; AraC family transcriptional regulator 598435 3096036 BPSS0435 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110458.1 597509 D 272560 CDS YP_110459.1 53721474 3096505 complement(598494..599396) 1 NC_006351.1 Similar to Rhizobium leguminosarum arac-like transcriptional regulator SWALL:Q93EA6 (EMBL:AF361470) (303 aa) fasta scores: E(): 1.6e-38, 38.92% id in 298 aa, and to Rhizobium leguminosarum arac-like transcriptional regulator SWALL:Q93EA7 (EMBL:AF361470) (306 aa) fasta scores: E(): 3.7e-14, 26.88% id in 305 aa; AraC family transcriptional regulator 599396 3096505 BPSS0436 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110459.1 598494 R 272560 CDS YP_110460.1 53721475 3095580 complement(599746..600948) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll3464 SWALL:Q98G70 (EMBL:AP003002) (405 aa) fasta scores: E(): 1.3e-54, 44.63% id in 401 aa, and to Xanthomonas campestris MFS transporter xcc0495 SWALL:AAM39811 (EMBL:AE012146) (396 aa) fasta scores: E(): 3.3e-42, 39.23% id in 390 aa; transporter protein 600948 3095580 BPSS0437 Burkholderia pseudomallei K96243 transporter protein YP_110460.1 599746 R 272560 CDS YP_110461.1 53721476 3095581 601354..602265 1 NC_006351.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsp0910 or rs01682 SWALL:Q8XRE4 (EMBL:AL646081) (309 aa) fasta scores: E(): 5.5e-53, 49.5% id in 303 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0056 SWALL:Q9I776 (EMBL:AE004445) (306 aa) fasta scores: E(): 3.5e-30, 35.43% id in 302 aa; LysR family transcriptional regulator 602265 3095581 BPSS0438 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110461.1 601354 D 272560 CDS YP_110462.1 53721477 3096171 complement(602395..603081) 1 NC_006351.1 Similar to Ralstonia solanacearum hydrolase rsc0242 or rs00674 SWALL:Q8Y2U0 (EMBL:AL646058) (228 aa) fasta scores: E(): 2.4e-77, 85.9% id in 227 aa, and to Rhizobium meliloti hydrolase ra0202 or sma0376 SWALL:Q930J3 (EMBL:AE007213) (229 aa) fasta scores: E(): 5.6e-68, 78.94% id in 228 aa; hypothetical protein 603081 3096171 BPSS0439 Burkholderia pseudomallei K96243 hypothetical protein YP_110462.1 602395 R 272560 CDS YP_110463.1 53721478 3095827 603608..603922 1 NC_006351.1 Similar to Xanthomonas campestris hypothetical protein xcc2052 SWALL:Q8P914 (EMBL:AE012311) (102 aa) fasta scores: E(): 9.2e-19, 62.13% id in 103 aa, and to Rhizobium leguminosarum hypothetical 10.3 kDa protein SWALL:Q93EB2 (EMBL:AF361470) (96 aa) fasta scores: E(): 7.9e-15, 56.38% id in 94 aa; hypothetical protein 603922 3095827 BPSS0440 Burkholderia pseudomallei K96243 hypothetical protein YP_110463.1 603608 D 272560 CDS YP_110464.1 53721479 3095828 603915..605813 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein atu3982 or agr_l_1745 SWALL:Q8U8V6 (EMBL:AE009329) (625 aa) fasta scores: E(): 1.1e-204, 79.32% id in 624 aa, and to Ralstonia solanacearum hypothetical protein rsc0239 or rs00671 SWALL:Q8Y2U3 (EMBL:AL646058) (612 aa) fasta scores: E(): 7e-154, 65.59% id in 625 aa; hypothetical protein 605813 3095828 BPSS0441 Burkholderia pseudomallei K96243 hypothetical protein YP_110464.1 603915 D 272560 CDS YP_110465.1 53721480 3096163 605992..607227 1 NC_006351.1 C-terminal region similar to C-terminal region of Xanthomonas campestris hypothetical protein xcc2051 SWALL:Q8P915 (EMBL:AE012311) (403 aa) fasta scores: E(): 4e-61, 63.57% id in 280 aa, and similar in its C-terminal region to the full length of Bradyrhizobium japonicum protein blr4261 SWALL:BAC49526 (EMBL:AP005950) (310 aa) fasta scores: E(): 1.4e-60, 59.04% id in 293 aa, N-terminal region similar to Streptomyces coelicolor hypothetical protein sco0467 or scf76.07 SWALL:Q9RJG7 (EMBL:Q9RJG7) blastp scores: Score = 49.2 bits (115), Expect = 1e-04 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%); hypothetical protein 607227 3096163 BPSS0442 Burkholderia pseudomallei K96243 hypothetical protein YP_110465.1 605992 D 272560 CDS YP_110466.1 53721481 3096263 607554..608903 1 NC_006351.1 Similar to Xanthomonas campestris hypothetical protein xcc2050 SWALL:AAM41339 (EMBL:AE012311) (463 aa) fasta scores: E(): 4.3e-106, 57.7% id in 435 aa, and to Zymomonas mobilis hypothetical 54.0 kDa protein SWALL:Q9RQC9 (EMBL:AF117351) (483 aa) fasta scores: E(): 1.2e-07, 24.41% id in 340 aa; hypothetical protein 608903 3096263 BPSS0443 Burkholderia pseudomallei K96243 hypothetical protein YP_110466.1 607554 D 272560 CDS YP_110467.1 53721482 3096545 609469..610290 1 NC_006351.1 Similar to Pseudomonas fluorescens non-heme chloroperoxidase Cpo or CpoF SWALL:PRXC_PSEFL (SWALL:O31158) (273 aa) fasta scores: E(): 2.3e-73, 67.77% id in 270 aa, and to Burkholderia cepacia chloride peroxidase SWALL:Q8VT61 (EMBL:AF335493) (273 aa) fasta scores: E(): 1.2e-86, 78.59% id in 271 aa; non-heme chloroperoxidase 610290 cpo 3096545 cpo Burkholderia pseudomallei K96243 non-heme chloroperoxidase YP_110467.1 609469 D 272560 CDS YP_110468.1 53721483 3096419 611180..611809 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein xac0432 SWALL:Q8PQ96 (EMBL:AE011670) (226 aa) fasta scores: E(): 1.2e-40, 57.61% id in 210 aa, and to Pseudomonas aeruginosa hypothetical protein pa4017 SWALL:Q9HX10 (EMBL:AE004818) (213 aa) fasta scores: E(): 4.1e-21, 42.1% id in 209 aa; hypothetical protein 611809 3096419 BPSS0446 Burkholderia pseudomallei K96243 hypothetical protein YP_110468.1 611180 D 272560 CDS YP_110469.1 53721484 3096744 612507..613112 1 NC_006351.1 Similar to Escherichia coli hypothetical protein YddH or b1462 SWALL:YDDH_ECOLI (SWALL:P76121) (189 aa) fasta scores: E(): 2.5e-22, 38.42% id in 190 aa, and to Xanthomonas campestris hypothetical protein xcc3203 SWALL:AAM42473 (EMBL:AE012437) (193 aa) fasta scores: E(): 6.4e-08, 28.49% id in 179 aa; hypothetical protein 613112 3096744 BPSS0447 Burkholderia pseudomallei K96243 hypothetical protein YP_110469.1 612507 D 272560 CDS YP_110470.1 53721485 3095892 complement(613249..613701) 1 NC_006351.1 hypothetical protein 613701 3095892 BPSS0448 Burkholderia pseudomallei K96243 hypothetical protein YP_110470.1 613249 R 272560 CDS YP_110471.1 53721486 3095893 complement(613963..615297) 1 NC_006351.1 Similar to Rhodobacter sphaeroides hypothetical transcriptional regulator in rdxA 3'region SWALL:YRDX_RHOSH (SWALL:Q01856) (456 aa) fasta scores: E(): 1.1e-45, 37.81% id in 439 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2100 SWALL:Q9I215 (EMBL:AE004637) (477 aa) fasta scores: E(): 6.5e-43, 35.46% id in 423 aa; GntR family transcriptional regulator 615297 3095893 BPSS0449 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_110471.1 613963 R 272560 CDS YP_110472.1 53721487 3096732 615386..616003 1 NC_006351.1 Similar to Methanosarcina mazei transcriptional regulator, AraC family mm3310 SWALL:AAM33006 (EMBL:AE013592) (209 aa) fasta scores: E(): 6.8e-05, 26.92% id in 208 aa, and to parts of Xanthomonas campestris thiJ/pfpI family protein xcc3565 SWALL:AAM42835 (EMBL:AE012477) (257 aa) fasta scores: E(): 5.9e-07, 29.37% id in 177 aa; DJ-1/PfpI family protein 616003 3096732 BPSS0450 Burkholderia pseudomallei K96243 DJ-1/PfpI family protein YP_110472.1 615386 D 272560 CDS YP_110473.1 53721488 3096655 complement(616361..617449) 1 NC_006351.1 C-terminal region is similar to Escherichia coli, and Shigella flexneri penicillin-binding protein 7 precursor PbpG or b2134 or sf2219 or s2348 SWALL:PBP7_ECOLI (SWALL:P33364) (313 aa) fasta scores: E(): 2.9e-36, 46.69% id in 272 aa. Full length CDS is similar to Ralstonia solanacearum D-alanyl-D-alanine-endopeptidase rsc1609 or rs03972 SWALL:Q8XYZ7 (EMBL:AL646065) (375 aa) fasta scores: E(): 1.2e-51, 47.82% id in 345 aa; peptidase 617449 3096655 BPSS0451 Burkholderia pseudomallei K96243 peptidase YP_110473.1 616361 R 272560 CDS YP_110474.1 53721489 3096656 618584..620524 1 NC_006351.1 Similar in its N-terminal region to Thermoanaerobacter tengcongensis DNA polymerase IV Pol4 or tte2516 SWALL:Q8R7A2 (EMBL:AE013193) (570 aa) fasta scores: E(): 3.1e-74, 43.36% id in 565 aa, and to Bacillus halodurans DNA-dependent DNA polymerase beta chain bh3107 SWALL:Q9K899 (EMBL:AP001517) (571 aa) fasta scores: E(): 5.3e-63, 38.21% id in 581 aa. Note: This CDS presents no similarity to any of the database matches in its C-terminal region (from approx. residue 577 onwards); phosphoesterase 620524 3096656 BPSS0452 Burkholderia pseudomallei K96243 phosphoesterase YP_110474.1 618584 D 272560 CDS YP_110475.1 53721490 3095839 620793..621200 1 NC_006351.1 hypothetical protein 621200 3095839 BPSS0453 Burkholderia pseudomallei K96243 hypothetical protein YP_110475.1 620793 D 272560 CDS YP_110476.1 53721491 3095535 621293..621589 1 NC_006351.1 hypothetical protein 621589 3095535 BPSS0454 Burkholderia pseudomallei K96243 hypothetical protein YP_110476.1 621293 D 272560 CDS YP_110477.1 53721492 3095536 621586..623250 1 NC_006351.1 Similar to Agrobacterium tumefaciens copper tolerance protein CopB or atu3992 or agr_l_1720 WALL:Q8U8U6 (EMBL:AE009330) (492 aa) fasta scores: E(): 1.1e-42, 40.04% id in 482 aa, and to Rhizobium meliloti hypothetical protein ra0562 or sma1037 SWALL:Q92ZC8 (EMBL:AE007246) (488 aa) fasta scores: E(): 3.4e-42, 39.17% id in 485 aa; copper resistance-related lipoprotein 623250 3095536 BPSS0455 Burkholderia pseudomallei K96243 copper resistance-related lipoprotein YP_110477.1 621586 D 272560 CDS YP_110478.1 53721493 3096682 623253..624548 1 NC_006351.1 Similar to Bradyrhizobium japonicum multicopper oxidase CopA or bll2210 SWALL:BAC47475 (EMBL:AP005942) (445 aa) fasta scores: E(): 5.9e-124, 70.99% id in 424 aa, and low to the plasmid-borne Escherichia coli copper resistance protein A precursor PcoA SWALL:PCOA_ECOLI (SWALL:Q47452) (605 aa) fasta scores: E(): 2e-12, 26.94% id in 386 aa; exported copper oxidase 624548 3096682 BPSS0456 Burkholderia pseudomallei K96243 exported copper oxidase YP_110478.1 623253 D 272560 CDS YP_110479.1 53721494 3096683 624667..625023 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical signal peptide protein rsp0929 or rs05404 SWALL:Q8XRC9 (EMBL:AL646081) (114 aa) fasta scores: E(): 2.3e-10, 45.76% id in 118 aa, and to Rhizobium meliloti hypothetical signal peptide protein r00588 or smc02284 SWALL:Q92S41 (EMBL:AL591784) (94 aa) fasta scores: E(): 8.3e-08, 52% id in 75 aa; hypothetical protein 625023 3096683 BPSS0457 Burkholderia pseudomallei K96243 hypothetical protein YP_110479.1 624667 D 272560 CDS YP_110480.1 53721495 3096033 625073..625453 1 NC_006351.1 Similar to Yersinia pestis copper resistance protein ypo1784 SWALL:Q8ZFD0 (EMBL:AJ414150) (128 aa) fasta scores: E(): 5e-10, 40.51% id in 116 aa, and to Escherichia coli copper resistance protein C precursor PcoC SWALL:PCOC_ECOLI (SWALL:Q47454) (126 aa) fasta scores: E(): 6.1e-05, 34.86% id in 109 aa; copper-resistance exported protein 625453 3096033 BPSS0458 Burkholderia pseudomallei K96243 copper-resistance exported protein YP_110480.1 625073 D 272560 CDS YP_110481.1 53721496 3095729 625453..626397 1 NC_006351.1 Similar to Ralstonia solanacearum probable copper resistance D transmembrane protein CopD or rsp0659 or rs01790 SWALL:Q8XS22 (EMBL:AL646080) (309 aa) fasta scores: E(): 2.3e-08, 30.88% id in 327 aa, and to Pseudomonas syringae copper resistance protein D copD SWALL:COPD_PSESF (SWALL:Q9KWM8) (311 aa) fasta scores: E(): 2.6e-08, 31.29% id in 262 aa; copper-resistance membrane protein 626397 3095729 BPSS0459 Burkholderia pseudomallei K96243 copper-resistance membrane protein YP_110481.1 625453 D 272560 CDS YP_110482.1 53721497 3095730 626698..628539 1 NC_006351.1 Similar to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 1e-49, 43.19% id in 558 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis I CheD3 or rsp1406 or rs02052 SWALL:Q8XQ80 (EMBL:AL646084) (608 aa) fasta scores: E(): 1e-57, 44.6% id in 621 aa; methyl-accepting chemotaxis protein 628539 3095730 BPSS0460 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_110482.1 626698 D 272560 CDS YP_110483.1 53721498 3095942 complement(628847..630139) 1 NC_006351.1 Similar to Escherichia coli probable oxidoreductase OrdL or b1301 SWALL:ORDL_ECOLI (SWALL:P37906) (426 aa) fasta scores: E(): 4.4e-61, 43.97% id in 423 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa5309 SWALL:Q9HTP5 (EMBL:AE004943) (439 aa) fasta scores: E(): 2e-73, 50% id in 436 aa; oxidoreductase 630139 3095942 BPSS0461 Burkholderia pseudomallei K96243 oxidoreductase YP_110483.1 628847 R 272560 CDS YP_110484.1 53721499 3096800 complement(630210..631541) 1 NC_006351.1 Similar to Pseudomonas putida oxidoreductase, pp5273 SWALL:AAN70838 (EMBL:AE016793) (430 aa) fasta scores: E(): 5e-58, 42.51% id in 421 aa, and to Escherichia coli probable oxidoreductase OrdL or b1301 SWALL:ORDL_ECOLI (SWALL:P37906) (426 aa) fasta scores: E(): 1.7e-53, 38.42% id in 419 aa. Note: This CDS contains two possible alternative start codons at residues 5 and/or 14; oxidoreductase 631541 3096800 BPSS0462 Burkholderia pseudomallei K96243 oxidoreductase YP_110484.1 630210 R 272560 CDS YP_110485.1 53721500 3096801 complement(631645..633219) 1 NC_006351.1 hypothetical protein 633219 3096801 BPSS0463 Burkholderia pseudomallei K96243 hypothetical protein YP_110485.1 631645 R 272560 CDS YP_110486.1 53721501 3095862 complement(633288..634217) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O6 putrescine transport system permease PotI or b0857 or c0990 SWALL:POTI_ECOLI (SWALL:P31136) (281 aa) fasta scores: E(): 2.4e-56, 58.86% id in 265 aa, and to Salmonella typhi putrescine transport system permease sty0913 SWALL:Q8Z843 (EMBL:AL627268) (281 aa) fasta scores: E(): 4.5e-55, 57.35% id in 265 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; putrescine transport system permease 634217 potI 3095862 potI Burkholderia pseudomallei K96243 putrescine transport system permease YP_110486.1 633288 R 272560 CDS YP_110487.1 53721502 3095901 complement(634214..635194) 1 NC_006351.1 Similar to Escherichia coli putrescine transport system permease PotH or b0856 SWALL:POTH_ECOLI (SWALL:P31135) (317 aa) fasta scores: E(): 8.1e-65, 55.98% id in 284 aa, and to Yersinia pestis putrescine transport system permease ypo1333 or y2848 SWALL:AAM86399 (EMBL:AJ414147) (321 aa) fasta scores: E(): 4.5e-67, 53.72% id in 322 aa. Note: This CDS has a possible aternative star codon at residue 44; putrescine ABC transport system, permease 635194 potH 3095901 potH Burkholderia pseudomallei K96243 putrescine ABC transport system, permease YP_110487.1 634214 R 272560 CDS YP_110488.1 53721503 3095749 complement(635191..636345) 1 NC_006351.1 Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 1.4e-71, 54.83% id in 372 aa, and to Neisseria meningitidis spermidine/putrescine ABC transporter ATP-binding protein nmb0610 SWALL:Q9K0I9 (EMBL:AE002416) (419 aa) fasta scores: E(): 1.4e-76, 56.38% id in 360 aa; putrescine ABC transporter ATP-binding protein 636345 potG 3095749 potG Burkholderia pseudomallei K96243 putrescine ABC transporter ATP-binding protein YP_110488.1 635191 R 272560 CDS YP_110489.1 53721504 3095748 complement(636535..637656) 1 NC_006351.1 Similar to Escherichia coli putrescine-binding periplasmic protein precursor PotF or b0854 SWALL:POTF_ECOLI (SWALL:P31133) (370 aa) fasta scores: E(): 3.3e-67, 49.3% id in 357 aa, and to Pseudomonas aeruginosa polyamine transport protein pa0301 SWALL:Q9I6J0 (EMBL:AE004468) (365 aa) fasta scores: E(): 6.3e-69, 49.59% id in 367 aa. Possible alternative translational start site; putrescine ABC transporter binding exported protein 637656 potF 3095748 potF Burkholderia pseudomallei K96243 putrescine ABC transporter binding exported protein YP_110489.1 636535 R 272560 CDS YP_110490.1 53721505 3096129 complement(637724..639142) 1 NC_006351.1 Similar to Pseudomonas fluorescens BioA SWALL:Q9AH00 (EMBL:AF323694) (453 aa) fasta scores: E(): 1.1e-109, 58.29% id in 446 aa, and to Agrobacterium tumefaciens adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA or atu1002 or agr_c_1843 SWALL:Q8UGN4 (EMBL:AE009065) (484 aa) fasta scores: E(): 3.3e-101, 54.56% id in 438 aa; aminotransferase 639142 3096129 BPSS0468 Burkholderia pseudomallei K96243 aminotransferase YP_110490.1 637724 R 272560 CDS YP_110491.1 53721506 3096236 complement(639178..640512) 1 NC_006351.1 Similar to Xanthomonas campestris glutamine synthetase GlnA or xcc2346 SWALL:AAM41624 (EMBL:AE012342) (461 aa) fasta scores: E(): 6e-107, 58.63% id in 440 aa, and to Thermotoga maritima glutamine synthetase GlnA or tm0943 SWALL:GLNA_THEMA (SWALL:P36205) (439 aa) fasta scores: E(): 1.9e-29, 28.09% id in 420 aa; glutamine synthetase 640512 3096236 BPSS0469 Burkholderia pseudomallei K96243 glutamine synthetase YP_110491.1 639178 R 272560 CDS YP_110492.1 53721507 3096237 complement(640539..641339) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable glutamine amidotransferase pa0297 SWALL:Q9I6J4 (EMBL:AE004467) (250 aa) fasta scores: E(): 1.6e-48, 55.46% id in 247 aa, and to Escherichia coli O157:H7 probable amidotransferase subunit YcjL or z2490 or ecs1875 SWALL:Q8X7G2 (EMBL:AE005376) (258 aa) fasta scores: E(): 2e-31, 40.87% id in 252 aa; glutamine amidotransferase 641339 3096237 BPSS0470 Burkholderia pseudomallei K96243 glutamine amidotransferase YP_110492.1 640539 R 272560 CDS YP_110493.1 53721508 3096198 641574..641981 1 NC_006351.1 hypothetical protein 641981 3096198 BPSS0471 Burkholderia pseudomallei K96243 hypothetical protein YP_110493.1 641574 D 272560 CDS YP_110494.1 53721509 3096024 642281..642832 1 NC_006351.1 Similar to Brucella melitensis transcriptional regulator, MerR family bmeii0372 SWALL:Q8YD05 (EMBL:AE009674) (182 aa) fasta scores: E(): 4.6e-32, 49.73% id in 185 aa, and to Shewanella oneidensis transcriptional regulator, so1265 SWALL:AAN54333 (EMBL:AE015570) (182 aa) fasta scores: E(): 2.1e-31, 53.29% id in 182 aa; MerR family transcriptional regulator 642832 3096024 BPSS0472 Burkholderia pseudomallei K96243 MerR family transcriptional regulator YP_110494.1 642281 D 272560 CDS YP_110495.1 53721510 3096025 642950..644440 1 NC_006351.1 Similar to Escherichia coli aldehyde dehydrogenase AldH or b1300 SWALL:DHAL_ECOLI (SWALL:P23883) (495 aa) fasta scores: E(): 8.7e-104, 54.52% id in 497 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa5312 SWALL:Q9HTP2 (EMBL:AE004944) (497 aa) fasta scores: E(): 5.9e-121, 62.65% id in 498 aa; aldehyde dehydrogenase 644440 3096025 BPSS0473 Burkholderia pseudomallei K96243 aldehyde dehydrogenase YP_110495.1 642950 D 272560 CDS YP_110496.1 53721511 3096391 644571..645533 1 NC_006351.1 catalyzes the formation of putrescine from agmatine; agmatinase 645533 speB 3096391 speB Burkholderia pseudomallei K96243 agmatinase YP_110496.1 644571 D 272560 CDS YP_110497.1 53721512 3095661 645652..646065 1 NC_006351.1 hypothetical protein 646065 3095661 BPSS0475 Burkholderia pseudomallei K96243 hypothetical protein YP_110497.1 645652 D 272560 CDS YP_110498.1 53721513 3095051 646259..646549 1 NC_006351.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 646549 groES 3095051 groES Burkholderia pseudomallei K96243 co-chaperonin GroES YP_110498.1 646259 D 272560 CDS YP_110499.1 53721514 3095050 646571..648211 1 NC_006351.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; molecular chaperone GroEL 648211 groEL 3095050 groEL Burkholderia pseudomallei K96243 molecular chaperone GroEL YP_110499.1 646571 D 272560 CDS YP_110500.1 53721515 3095566 complement(648273..648719) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2757 SWALL:Q9I086 (EMBL:AE004703) (147 aa) fasta scores: E(): 3.2e-30, 55.47% id in 146 aa, and to Vitreoscilla sp. hypothetical 17.2 kDa protein SWALL:Q9XD48 (EMBL:AF114793) (152 aa) fasta scores: E(): 6.4e-21, 45.32% id in 139 aa; hypothetical protein 648719 3095566 BPSS0478 Burkholderia pseudomallei K96243 hypothetical protein YP_110500.1 648273 R 272560 CDS YP_110501.1 53721516 3095567 649327..651861 1 NC_006351.1 Similar to Vaccinia virus ribonucleoside-diphosphate reductase large chain I4L SWALL:RIR1_VACCV (SWALL:P12848) (771 aa) fasta scores: E(): 2.8e-22, 25.22% id in 654 aa, and to Thermoanaerobacter tengcongensis ribonucleotide reductase alpha subunit tte2336 SWALL:Q8R7R2 (EMBL:AE013176) (691 aa) fasta scores: E(): 9.2e-56, 36.48% id in 677 aa; ribonucleotide reductase 651861 3095567 BPSS0479 Burkholderia pseudomallei K96243 ribonucleotide reductase YP_110501.1 649327 D 272560 CDS YP_110502.1 53721517 3096521 652422..652544 1 NC_006351.1 hypothetical protein 652544 3096521 BPSS0480 Burkholderia pseudomallei K96243 hypothetical protein YP_110502.1 652422 D 272560 CDS YP_110503.1 53721518 3096431 652895..654520 1 NC_006351.1 Similar to Azoarcus evansii 2-aminobenzoate-CoA ligase SWALL:Q93FC0 (EMBL:AF320253) (542 aa) fasta scores: E(): 2.6e-119, 57.35% id in 537 aa, and to Bacillus subtilis long-chain-fatty-acid--CoA ligase LcfA SWALL:LCFA_BACSU (SWALL:P94547) (560 aa) fasta scores: E(): 1.9e-31, 29.07% id in 564 aa; CoA ligase 654520 3096431 BPSS0481 Burkholderia pseudomallei K96243 CoA ligase YP_110503.1 652895 D 272560 CDS YP_110504.1 53721519 3096432 654607..655497 1 NC_006351.1 Similar in its N-terminal region to Pseudomonas aeruginosa hypothetical protein pa0997 SWALL:Q9I4X2 (EMBL:AE004532) (283 aa) fasta scores: E(): 2.6e-08, 33.15% id in 190 aa and very low similarity also in its N-terminal region to Bacillus subtilis 3-oxoacyl-[acyl-carrier-protein] synthase III FabH SWALL:FABH_BACSU (SWALL:O34746) (312 aa) fasta scores: E(): 0.25, 27.27% id in 154 aa; hypothetical protein 655497 3096432 BPSS0482 Burkholderia pseudomallei K96243 hypothetical protein YP_110504.1 654607 D 272560 CDS YP_110505.1 53721520 3095761 655497..656603 1 NC_006351.1 Most of the significant database matches in this CDS are to eukaryotic entries. Similar to Perilla frutescens beta-ketoacyl-ACP synthase IIIA Kas IIIA SWALL:O48944 (EMBL:AF026150) (401 aa) fasta scores: E(): 1.2e-18, 28.29% id in 357 aa, and to Cuphea wrightii 3-oxoacyl-[acyl-carrier-protein] synthase III A, chloroplast precursor Kas3A SWALL:FBH1_CUPWR (SWALL:P49244) (400 aa) fasta scores: E(): 1.6e-17, 28.88% id in 367 aa; 3-ketoacyl-ACP synthase 656603 3095761 BPSS0483 Burkholderia pseudomallei K96243 3-ketoacyl-ACP synthase YP_110505.1 655497 D 272560 CDS YP_110506.1 53721521 3095088 656593..657591 1 NC_006351.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis; 3-oxoacyl-ACP synthase 657591 fabH 3095088 fabH Burkholderia pseudomallei K96243 3-oxoacyl-ACP synthase YP_110506.1 656593 D 272560 CDS YP_110507.1 53721522 3095907 657606..658496 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1000 SWALL:YA00_PSEAE (SWALL:P20581) (301 aa) fasta scores: E(): 3.7e-25, 32.67% id in 303 aa, and to Aeropyrum pernix hypothetical protein ape2156 SWALL:Q9Y9Y3 (EMBL:AP000063) (298 aa) fasta scores: E(): 7.7e-07, 24.9% id in 249 aa; metallo-beta lactamase-related protein 658496 3095907 BPSS0485 Burkholderia pseudomallei K96243 metallo-beta lactamase-related protein YP_110507.1 657606 D 272560 CDS YP_110508.1 53721523 3095908 658624..662499 1 NC_006351.1 N-terminal region similar to Streptomyces atroolivaceus non-ribosomal peptide synthetase SWALL:AAN85512 (EMBL:AF484556) (1745 aa) fasta scores: E(): 2.8e-67, 36.51% id in 838 aa, and C-terminal region similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa1631 SWALL:Q9I391 (EMBL:AE004590) (384 aa) fasta scores: E(): 2e-23, 32.13% id in 361 aa; non-ribosomal peptide synthetase 662499 3095908 BPSS0486 Burkholderia pseudomallei K96243 non-ribosomal peptide synthetase YP_110508.1 658624 D 272560 CDS YP_110509.1 53721524 3096258 662513..664648 1 NC_006351.1 hypothetical protein 664648 3096258 BPSS0487 Burkholderia pseudomallei K96243 hypothetical protein YP_110509.1 662513 D 272560 CDS YP_110510.1 53721525 3096647 665015..665386 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0788 or rs05049 SWALL:Q8Y1A2 (EMBL:AL646061) (127 aa) fasta scores: E(): 2.7e-17, 47.1% id in 121 aa, and to Neisseria meningitidis membrane protein nma1176 SWALL:Q9JUR4 (EMBL:AL162755) (127 aa) fasta scores: E(): 8.6e-14, 42.06% id in 126 aa; hypothetical protein 665386 3096647 BPSS0488 Burkholderia pseudomallei K96243 hypothetical protein YP_110510.1 665015 D 272560 CDS YP_110511.1 53721526 3095335 666227..666682 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr2292 SWALL:Q98IR1 (EMBL:AP002999) (183 aa) fasta scores: E(): 4.2e-09, 32.62% id in 141 aa, and to Xanthomonas axonopodis hypothetical protein xac0102 SWALL:AAM34994 (EMBL:AE011633) (219 aa) fasta scores: E(): 2e-08, 33.11% id in 151 aa; hypothetical protein 666682 3095335 BPSS0489 Burkholderia pseudomallei K96243 hypothetical protein YP_110511.1 666227 D 272560 CDS YP_110512.1 53721527 3095973 complement(667638..669245) 1 NC_006351.1 Similar to Pseudomonas putida alkyl hydroperoxide reductase subunit F AhpF SWALL:AHPF_PSEPU (SWALL:O82864) (520 aa) fasta scores: E(): 2.5e-134, 71.26% id in 522 aa, and to Escherichia coli alkyl hydroperoxide reductase subunit F Ahpf or b0606 SWALL:AHPF_ECOLI (SWALL:P35340) (521 aa) fasta scores: E(): 1.6e-117, 60.5% id in 519 aa; alkyl hydroperoxide reductase 669245 ahpF 3095973 ahpF Burkholderia pseudomallei K96243 alkyl hydroperoxide reductase YP_110512.1 667638 R 272560 CDS YP_110513.1 53721528 3096133 complement(669449..670012) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri alkyl hydroperoxide reductase C22 protein AhpC or b0605 or c0694 or z0749 or ecs0644 or sf0524 SWALL:AHPC_ECOLI (SWALL:P26427) (186 aa) fasta scores: E(): 8.4e-52, 67.02% id in 185 aa, and to Pseudomonas putida AhpC SWALL:O82863 (EMBL:AB010689) (187 aa) fasta scores: E(): 6.4e-62, 81.28% id in 187 aa; alkyl hydroperoxide reductase 670012 ahpC 3096133 ahpC Burkholderia pseudomallei K96243 alkyl hydroperoxide reductase YP_110513.1 669449 R 272560 CDS YP_110514.1 53721529 3096851 complement(670272..671369) 1 NC_006351.1 Similar to the N-terminal region of Yersinia pestis carbohydrate-binding protein ypo3227 SWALL:Q8ZC03 (EMBL:AJ414156) (534 aa) fasta scores: E(): 9.8e-68, 52.97% id in 353 aa, and of Alteromonas sp. chitin-binding protein 1 precursor Cbp1 SWALL:Q8VLQ2 (EMBL:AB063629) (475 aa) fasta scores: E(): 1.2e-28, 38.04% id in 347 aa; chitin-binding protein 671369 3096851 BPSS0493 Burkholderia pseudomallei K96243 chitin-binding protein YP_110514.1 670272 R 272560 CDS YP_110515.1 53721530 3096852 complement(671929..672432) 1 NC_006351.1 hypothetical protein 672432 3096852 BPSS0494 Burkholderia pseudomallei K96243 hypothetical protein YP_110515.1 671929 R 272560 CDS YP_110516.1 53721531 3095734 complement(672507..673130) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3208 SWALL:Q9HZ32 (EMBL:AE004744) (186 aa) fasta scores: E(): 9.9e-25, 43.71% id in 183 aa, and to Escherichia coli, and Escherichia coli O157:H7 protein YdjA or b1765 or z2798 or ecs2471 SWALL:YDJA_ECOLI (SWALL:P24250) (183 aa) fasta scores: E(): 7.8e-18, 39.08% id in 174 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; nitroreductase 673130 3095734 BPSS0495 Burkholderia pseudomallei K96243 nitroreductase YP_110516.1 672507 R 272560 CDS YP_110517.1 53721532 3096563 673843..675279 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll0717 SWALL:Q98M60 (EMBL:AP002995) (478 aa) fasta scores: E(): 4.6e-148, 78.52% id in 475 aa, and to Synechocystis sp. hypothetical protein sll0335 SWALL:Y335_SYNY3 (SWALL:Q55587) (481 aa) fasta scores: E(): 1e-94, 52.13% id in 468 aa; hypothetical protein 675279 3096563 BPSS0496 Burkholderia pseudomallei K96243 hypothetical protein YP_110517.1 673843 D 272560 CDS YP_110518.1 53721533 3096564 675374..676315 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll0716 SWALL:Q98M61 (EMBL:AP002995) (313 aa) fasta scores: E(): 1.3e-84, 66.98% id in 312 aa, and to Agrobacterium tumefaciens hypothetical protein atu2339 or agr_c_4249 SWALL:Q8UCY9 (EMBL:AE009183) (313 aa) fasta scores: E(): 1.7e-74, 56.91% id in 311 aa; hypothetical protein 676315 3096564 BPSS0497 Burkholderia pseudomallei K96243 hypothetical protein YP_110518.1 675374 D 272560 CDS YP_110519.1 53721534 3096842 676324..677280 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein atu2340 or agr_c_4251 SWALL:Q8UCY8 (EMBL:AE009183) (273 aa) fasta scores: E(): 1.6e-26, 39.81% id in 319 aa, and to Rhizobium meliloti hypothetical protein rb1182 or smb20888 SWALL:Q92UE9 (EMBL:AL603646) (272 aa) fasta scores: E(): 1.9e-25, 38.8% id in 317 aa; transglutaminase-like superfamily protein 677280 3096842 BPSS0498 Burkholderia pseudomallei K96243 transglutaminase-like superfamily protein YP_110519.1 676324 D 272560 CDS YP_110520.1 53721535 3096215 677417..680839 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll2877 SWALL:Q98HG6 (EMBL:AP003000) (1119 aa) fasta scores: E(): 1.2e-129, 56.41% id in 1138 aa, and to Mycobacterium leprae hypothetical protein ml2678 or mlcb1913.12 SWALL:O53120 (EMBL:AL022118) (1000 aa) fasta scores: E(): 1.7e-23, 32.69% id in 1049 aa; transglutaminase-like superfamily protein 680839 3096215 BPSS0499 Burkholderia pseudomallei K96243 transglutaminase-like superfamily protein YP_110520.1 677417 D 272560 CDS YP_110521.1 53721536 3096216 681027..683675 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4927 SWALL:Q9HUN7 (EMBL:AE004905) (830 aa) fasta scores: E(): 8.9e-69, 42.25% id in 833 aa, and to Mycobacterium leprae hypothetical protein ml2679 or mlcb1913.13 SWALL:O53121 (EMBL:AL022118) (893 aa) fasta scores: E(): 2.3e-47, 32.03% id in 899 aa; hypothetical protein 683675 3096216 BPSS0500 Burkholderia pseudomallei K96243 hypothetical protein YP_110521.1 681027 D 272560 CDS YP_110522.1 53721537 3095926 683666..684703 1 NC_006351.1 CDS is extended at the N-terminus in comparison to some orthologues. Similar to Pseudomonas aeruginosa hypothetical protein pa4926 SWALL:Q9HUN8 (EMBL:AE004905) (311 aa) fasta scores: E(): 6.3e-32, 45.51% id in 323 aa, and to Mycobacterium tuberculosis hypothetical protein Rv2569c or MT2645 or MTCY227.32 SWALL:YP69_MYCTU (SWALL:Q50652) (314 aa) fasta scores: E(): 2.7e-28, 41.61% id in 310 aa; transglutaminase-like superfamily protein 684703 3095926 BPSS0501 Burkholderia pseudomallei K96243 transglutaminase-like superfamily protein YP_110522.1 683666 D 272560 CDS YP_110523.1 53721538 3095927 complement(684891..686393) 1 NC_006351.1 Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 8.3e-36, 31.95% id in 460 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa4165 SWALL:Q9HWL6 (EMBL:AE004833) (496 aa) fasta scores: E(): 4.8e-49, 38.21% id in 471 aa; GntR family transcriptional regulator 686393 3095927 BPSS0502 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_110523.1 684891 R 272560 CDS YP_110524.1 53721539 3096742 686521..687708 1 NC_006351.1 Similar to Pseudomonas aeruginosa chloramphenicol resistance protein CmlA SWALL:CMLA_PSEAE (SWALL:P32482) (419 aa) fasta scores: E(): 9.1e-26, 29.92% id in 381 aa, and to Pseudomonas aeruginosa probable MFS transporter pa3573 SWALL:Q9HY47 (EMBL:AE004778) (392 aa) fasta scores: E(): 3.7e-34, 34.39% id in 378 aa; transporter protein 687708 3096742 BPSS0503 Burkholderia pseudomallei K96243 transporter protein YP_110524.1 686521 D 272560 CDS YP_110525.1 53721540 3095305 complement(688046..689119) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0134 or rs02986 SWALL:Q8XTH6 (EMBL:AL646076) (361 aa) fasta scores: E(): 9.4e-72, 58.68% id in 351 aa, and to Neisseria meningitidis integral membrane protein nma0079 SWALL:Q9JX36 (EMBL:AL162752) (375 aa) fasta scores: E(): 8.9e-27, 34.57% id in 350 aa; hypothetical protein 689119 3095305 BPSS0504 Burkholderia pseudomallei K96243 hypothetical protein YP_110525.1 688046 R 272560 CDS YP_110526.1 53721541 3095306 complement(689358..690323) 1 NC_006351.1 Similar to Streptomyces coelicolor transcriptional regulator SCO6746 or SC5f2A.29 SWALL:Q9X7Q2 (EMBL:AL939129) (325 aa) fasta scores: E(): 5.5e-47, 45.62% id in 320 aa, and to Caulobacter crescentus AraC family transcriptional regulator cc2960 SWALL:Q9A483 (EMBL:AE005960) (312 aa) fasta scores: E(): 8.8e-44, 43.5% id in 308 aa. Similar to BPSS1864, 56.782% identity (56.782% ungapped) in 317 aa overlap; AraC family transcriptional regulator 690323 3095306 BPSS0505 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110526.1 689358 R 272560 CDS YP_110527.1 53721542 3096430 690465..691163 1 NC_006351.1 Similar to Anabaena sp. ThiJ family protein all7521 SWALL:Q8ZSI9 (EMBL:AP003602) (226 aa) fasta scores: E(): 2.7e-23, 39.6% id in 202 aa, and to Streptomyces coelicolor hypothetical protein sco6747 sco6747 or sc5f2a.30 SWALL:Q9X7Q3 (EMBL:AL939129) (211 aa) fasta scores: E(): 2.2e-14, 31.03% id in 203 aa; DJ-1/PfpI family protein 691163 3096430 BPSS0506 Burkholderia pseudomallei K96243 DJ-1/PfpI family protein YP_110527.1 690465 D 272560 CDS YP_110528.1 53721543 3095919 complement(691309..692376) 1 NC_006351.1 Similar to Pseudomonas aeruginosa 2-aminoethylphosphonate:pyruvate aminotransferase PhnW or pa1310 SWALL:Q9I434 (EMBL:AE004560) (371 aa) fasta scores: E(): 5.8e-31, 35.42% id in 350 aa, and to Vibrio cholerae 2-aminoethylphosphonate:pyruvate aminotransferase vca0604 SWALL:Q9KLY7 (EMBL:AE004391) (367 aa) fasta scores: E(): 8.4e-37, 37% id in 354 aa; aminotransferase class-V 692376 3095919 BPSS0507 Burkholderia pseudomallei K96243 aminotransferase class-V YP_110528.1 691309 R 272560 CDS YP_110529.1 53721544 3095920 complement(692391..693572) 1 NC_006351.1 Similar to Streptomyces viridochromogenes 3-phosphonopyruvate decarboxylase Ppd SWALL:O86938 (EMBL:Y14337) (397 aa) fasta scores: E(): 3.7e-49, 45.29% id in 393 aa, and to Streptomyces hygroscopicus 3-phosphonopyruvate decarboxylase BcpC SWALL:BAA07055 (EMBL:D37809) (401 aa) fasta scores: E(): 5.5e-46, 43.9% id in 394 aa; thiamine pyrophosphate enzyme 693572 3095920 BPSS0508 Burkholderia pseudomallei K96243 thiamine pyrophosphate enzyme YP_110529.1 692391 R 272560 CDS YP_110530.1 53721545 3095956 complement(693569..695203) 1 NC_006351.1 Possible fusion protein. N-terminal region is similar to Mytilus edulis phosphoenolpyruvate phosphomutase SWALL:PEPM_MYTED (SWALL:P56839) (295 aa) fasta scores: E(): 1.1e-72, 68.18% id in 286 aa, and to Tetrahymena pyriformis phosphoenolpyruvate phosphomutase precursor pepM SWALL:PEPM_TETPY (SWALL:P33182) (300 aa) fasta scores: E(): 2.7e-68, 61.95% id in 297 aa. C-terminal region is weakly similar to Pseudomonas putida transferase, pp0726 SWALL:AAN66351 (EMBL:AE016776) (241 aa) fasta scores: E(): 4.1e-13, 28.76% id in 226 aa; hypothetical protein 695203 3095956 BPSS0509 Burkholderia pseudomallei K96243 hypothetical protein YP_110530.1 693569 R 272560 CDS YP_110531.1 53721546 3096248 complement(695254..696036) 1 NC_006351.1 Similar to Caulobacter crescentus nucleotidyltransferase cc1152 SWALL:Q9A942 (EMBL:AE005793) (253 aa) fasta scores: E(): 3.8e-14, 32.93% id in 249 aa, and to Archaeoglobus fulgidus glucose-1-phosphate cytidylyltransferase af1142 SWALL:O29123 (EMBL:AE001025) (241 aa) fasta scores: E(): 3.2e-13, 28.62% id in 248 aa; hypothetical protein 696036 3096248 BPSS0510 Burkholderia pseudomallei K96243 hypothetical protein YP_110531.1 695254 R 272560 CDS YP_110532.1 53721547 3096249 complement(696060..697061) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4313 SWALL:Q9HW88 (EMBL:AE004847) (333 aa) fasta scores: E(): 4.3e-05, 25.98% id in 304 aa, and to Mycobacterium leprae probable integral membrane protein ml2618 SWALL:Q9CD01 (EMBL:AL583926) (352 aa) fasta scores: E(): 0.12, 24.31% id in 329 aa; hypothetical protein 697061 3096249 BPSS0511 Burkholderia pseudomallei K96243 hypothetical protein YP_110532.1 696060 R 272560 CDS YP_110533.1 53721548 3095733 complement(697058..697831) 1 NC_006351.1 Weakly similar to Streptomyces griseus ArpA protein SWALL:Q54223 (EMBL:X79605) (250 aa) fasta scores: E(): 8.3e-05, 26.02% id in 196 aa; hypothetical protein 697831 3095733 BPSS0512 Burkholderia pseudomallei K96243 hypothetical protein YP_110533.1 697058 R 272560 CDS YP_110534.1 53721549 3096807 complement(697828..698517) 1 NC_006351.1 Weakly similar to Aeropyrum pernix hypothetical protein ape1516 SWALL:Q9YBT3 (EMBL:AP000061) (223 aa) fasta scores: E(): 2.3e-05, 27.91% id in 197 aa, and to Streptomyces coelicolor transmembrane protein SCO3457 or SCE46.14 SWALL:Q9RKH5 (EMBL:AL939116) (205 aa) fasta scores: E(): 0.00014, 32.63% id in 190 aa; CDP-alcohol phosphatidyltransferase 698517 3096807 BPSS0513 Burkholderia pseudomallei K96243 CDP-alcohol phosphatidyltransferase YP_110534.1 697828 R 272560 CDS YP_110535.1 53721550 3096808 698792..700396 1 NC_006351.1 Similar to Clostridium kluyveri succinyl-CoA:coenzyme A transferase Cat1 SWALL:CAT1_CLOKL (SWALL:P38946) (538 aa) fasta scores: E(): 2e-97, 51.73% id in 520 aa, and to Xanthomonas campestris coa tranferase xcc3588 SWALL:Q8P4W8 (EMBL:AE012479) (504 aa) fasta scores: E(): 1.2e-133, 68.52% id in 502 aa. Possible alternative translational start sites; acetyl-CoA hydrolase/transferase 700396 3096808 BPSS0514 Burkholderia pseudomallei K96243 acetyl-CoA hydrolase/transferase YP_110535.1 698792 D 272560 CDS YP_110536.1 53721551 3095506 702116..703054 1 NC_006351.1 Weakly similar to Yersinia pestis hypothetical protein ypo0499 or y3676 SWALL:Q8ZIJ9 (EMBL:AJ414143) (337 aa) fasta scores: E(): 2.6e-05, 28.43% id in 313 aa, and to Xanthomonas axonopodis hypothetical protein xac4112 SWALL:Q8PF73 (EMBL:AE012060) (347 aa) fasta scores: E(): 0.084, 26.3% id in 346 aa; hypothetical protein 703054 3095506 BPSS0515 Burkholderia pseudomallei K96243 hypothetical protein YP_110536.1 702116 D 272560 CDS YP_110537.1 53721552 3096828 703088..703636 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0500 SWALL:Q8ZIJ8 (EMBL:AJ414143) (186 aa) fasta scores: E(): 5.8e-30, 55.76% id in 156 aa, and to Salmonella typhi hypothetical protein sty0297 SWALL:Q8Z970 (EMBL:AL627266) (180 aa) fasta scores: E(): 4.7e-28, 47.51% id in 181 aa; hypothetical protein 703636 3096828 BPSS0516 Burkholderia pseudomallei K96243 hypothetical protein YP_110537.1 703088 D 272560 CDS YP_110538.1 53721553 3096829 703633..705144 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0501 SWALL:Q8ZIJ7 (EMBL:AJ414143) (503 aa) fasta scores: E(): 5.4e-142, 65.66% id in 498 aa, and to Pseudomonas aeruginosa hypothetical protein pa0084 SWALL:Q9I748 (EMBL:AE004447) (498 aa) fasta scores: E(): 8e-133, 61.94% id in 494 aa; hypothetical protein 705144 3096829 BPSS0517 Burkholderia pseudomallei K96243 hypothetical protein YP_110538.1 703633 D 272560 CDS YP_110539.1 53721554 3096785 705288..705815 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0502 SWALL:Q8ZIJ6 (EMBL:AJ414143) (172 aa) fasta scores: E(): 1e-49, 72.09% id in 172 aa, and to Pseudomonas aeruginosa hypothetical protein pa0085 SWALL:Q9I747 (EMBL:AE004447) (162 aa) fasta scores: E(): 4.1e-13, 37.27% id in 169 aa; hypothetical protein 705815 3096785 BPSS0518 Burkholderia pseudomallei K96243 hypothetical protein YP_110539.1 705288 D 272560 CDS YP_110540.1 53721555 3096580 705856..706326 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0503 SWALL:Q8ZIJ5 (EMBL:AJ414143) (147 aa) fasta scores: E(): 9.3e-06, 30.37% id in 135 aa. Weakly similar to Salmonella typhi hypothetical protein sty0290 SWALL:Q8Z977 (EMBL:AL627266) (164 aa) fasta scores: E(): 0.1, 31.57% id in 114 aa; hypothetical protein 706326 3096580 BPSS0519 Burkholderia pseudomallei K96243 hypothetical protein YP_110540.1 705856 D 272560 CDS YP_110541.1 53721556 3096581 706340..708202 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0504 SWALL:Q8ZIJ4 (EMBL:AJ414143) (614 aa) fasta scores: E(): 5.2e-60, 33.98% id in 612 aa, and to Pseudomonas aeruginosa hypothetical protein pa0088 SWALL:Q9I744 (EMBL:AE004447) (619 aa) fasta scores: E(): 1.3e-39, 31.38% id in 615 aa; hypothetical protein 708202 3096581 BPSS0520 Burkholderia pseudomallei K96243 hypothetical protein YP_110541.1 706340 D 272560 CDS YP_110542.1 53721557 3095800 708199..709188 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0505 SWALL:Q8ZIJ3 (EMBL:AJ414143) (327 aa) fasta scores: E(): 4.8e-37, 36.41% id in 335 aa. Weakly similar to Pseudomonas aeruginosa hypothetical protein pa0089 SWALL:Q9I743 (EMBL:AE004447) (348 aa) fasta scores: E(): 5.4e-15, 28.34% id in 321 aa; hypothetical protein 709188 3095800 BPSS0521 Burkholderia pseudomallei K96243 hypothetical protein YP_110542.1 708199 D 272560 CDS YP_110543.1 53721558 3096832 709191..712061 1 NC_006351.1 N-terminal region is similar to Escherichia coli heat shock protein ClpB or HtpM SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 7.4e-43, 36.28% id in 871 aa, and to Yersinia pestis Clp ATPase ypo0506 SWALL:Q8ZIJ2 (EMBL:AJ414143) (867 aa) fasta scores: E(): 1.6e-136, 48.66% id in 861 aa; ATPase 712061 3096832 BPSS0522 Burkholderia pseudomallei K96243 ATPase YP_110543.1 709191 D 272560 CDS YP_110544.1 53721559 3096833 712052..714343 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0507 SWALL:Q8ZIJ1 (EMBL:AJ414143) (782 aa) fasta scores: E(): 1.4e-145, 58.14% id in 786 aa, and to Pseudomonas aeruginosa hypothetical protein pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 4.8e-63, 33.56% id in 733 aa. CDS is extended at the C-terminus in comparison to orthologues. Highly simlar to BPSS0524, 91.874% identity (91.995% ungapped) in 763 aa overlap; hypothetical protein 714343 3096833 BPSS0523 Burkholderia pseudomallei K96243 hypothetical protein YP_110544.1 712052 D 272560 CDS YP_110545.1 53721560 3095481 714509..716797 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0507 SWALL:Q8ZIJ1 (EMBL:AJ414143) (782 aa) fasta scores: E(): 1.1e-143, 57.7% id in 785 aa, and to Pseudomonas aeruginosa hypothetical protein pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 1.3e-60, 33.6% id in 735 aa. Highly similar to BPSS0523, 91.874% identity (91.995% ungapped) in 763 aa overlap; hypothetical protein 716797 3095481 BPSS0524 Burkholderia pseudomallei K96243 hypothetical protein YP_110545.1 714509 D 272560 CDS YP_110546.1 53721561 3096425 716801..719017 1 NC_006351.1 No significant database matches to the full length CDS. N-terminal region is similar to Yersinia pestis hypothetical protein ypo0508 SWALL:Q8ZIJ0 (EMBL:AJ414143) (190 aa) fasta scores: E(): 4.9e-08, 30.6% id in 183 aa. Internal region is similar to Yersinia pestis hypothetical protein ypo0509 SWALL:Q8ZII9 (EMBL:AJ414143) (540 aa) fasta scores: E(): 4.2e-21, 24.13% id in 547 aa. C-terminal region is similar to to Yersinia pestis hypothetical protein ypo0510 SWALL:Q8ZII8 (EMBL:AJ414143) (367 aa) fasta scores: E(): 0.00034, 18.62% id in 247 aa; hypothetical protein 719017 3096425 BPSS0525 Burkholderia pseudomallei K96243 hypothetical protein YP_110546.1 716801 D 272560 CDS YP_110547.1 53721562 3096426 719014..720087 1 NC_006351.1 Weakly similar to Chlorobium tepidum pentapeptide repeat family protein CT0918 SWALL:AAM72153 (EMBL:AE012857) (382 aa) fasta scores: E(): 0.06, 19.69% id in 325 aa; hypothetical protein 720087 3096426 BPSS0526 Burkholderia pseudomallei K96243 hypothetical protein YP_110547.1 719014 D 272560 CDS YP_110548.1 53721563 3095877 720090..720806 1 NC_006351.1 Possible alternative translational start site. C-terminal region is weakly similar to Yersinia pestis hypothetical protein ypo0511 SWALL:Q8ZII7 (EMBL:AJ414143) (205 aa) fasta scores: E(): 0.0008, 25.74% id in 202 aa; hypothetical protein 720806 3095877 BPSS0527 Burkholderia pseudomallei K96243 hypothetical protein YP_110548.1 720090 D 272560 CDS YP_110549.1 53721564 3095391 720849..721238 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0511a SWALL:Q8ZII6 (EMBL:AJ414143) (121 aa) fasta scores: E(): 1.1e-09, 44.14% id in 111 aa. Similar to BPSS0185, 55.556% identity (56.075% ungapped) in 108 aa overlap; hypothetical protein 721238 3095391 BPSS0528 Burkholderia pseudomallei K96243 hypothetical protein YP_110549.1 720849 D 272560 CDS YP_110550.1 53721565 3095392 721244..721837 1 NC_006351.1 Weakly similar to Yersinia pestis lipoprotein ypo0512 SWALL:Q8ZII5 (EMBL:AJ414143) (163 aa) fasta scores: E(): 1.1e-05, 23.7% id in 135 aa; lipoprotein 721837 3095392 BPSS0529 Burkholderia pseudomallei K96243 lipoprotein YP_110550.1 721244 D 272560 CDS YP_110551.1 53721566 3095955 721834..723195 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0513 SWALL:Q8ZII4 (EMBL:AJ414143) (451 aa) fasta scores: E(): 5.3e-66, 41.2% id in 449 aa, and to Pseudomonas aeruginosa hypothetical protein pa0079 SWALL:Q9I753 (EMBL:AE004447) (444 aa) fasta scores: E(): 1.5e-46, 35.21% id in 443 aa; hypothetical protein 723195 3095955 BPSS0530 Burkholderia pseudomallei K96243 hypothetical protein YP_110551.1 721834 D 272560 CDS YP_110552.1 53721567 3095834 723278..724936 1 NC_006351.1 Similar to Yersinia pestis OmpA-family membrane protein ypo0514 SWALL:Q8ZII3 (EMBL:AJ414143) (536 aa) fasta scores: E(): 5.4e-45, 36.23% id in 505 aa. Internal region is weakly similar to Salmonella typhi membrane protein sty0305 SWALL:Q8Z965 (EMBL:AL627266) (433 aa) fasta scores: E(): 3.5e-13, 28.31% id in 445 aa. CDS is extended at the C-terminus in comparison to similar proteins; hypothetical protein 724936 3095834 BPSS0531 Burkholderia pseudomallei K96243 hypothetical protein YP_110552.1 723278 D 272560 CDS YP_110553.1 53721568 3095835 724933..728436 1 NC_006351.1 Similar to Yersinia pestis membrane protein ypo0515 SWALL:Q8ZII2 (EMBL:AJ414143) (1150 aa) fasta scores: E(): 2.6e-128, 34.31% id in 1157 aa. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa0077 SWALL:Q9I755 (EMBL:AE004446) (1101 aa) fasta scores: E(): 6e-62, 26.85% id in 1132 aa; hypothetical protein 728436 3095835 BPSS0532 Burkholderia pseudomallei K96243 hypothetical protein YP_110553.1 724933 D 272560 CDS YP_110554.1 53721569 3096749 728495..728854 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo0516 SWALL:Q8ZII1 (EMBL:AJ414143) (117 aa) fasta scores: E(): 1.1e-07, 31.53% id in 111 aa; hypothetical protein 728854 3096749 BPSS0533 Burkholderia pseudomallei K96243 hypothetical protein YP_110554.1 728495 D 272560 CDS YP_110555.1 53721570 3095635 728877..729302 1 NC_006351.1 Doubtful CDS. No significant database matches; hypothetical protein 729302 3095635 BPSS0534 Burkholderia pseudomallei K96243 hypothetical protein YP_110555.1 728877 D 272560 CDS YP_110556.1 53721571 3095636 729527..729898 1 NC_006351.1 hypothetical protein 729898 3095636 BPSS0535 Burkholderia pseudomallei K96243 hypothetical protein YP_110556.1 729527 D 272560 CDS YP_110557.1 53721572 3096849 730449..731348 1 NC_006351.1 Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 subunit A RhlA SWALL:RHLA_PSEAE (SWALL:Q51559) (295 aa) fasta scores: E(): 4e-45, 48.49% id in 266 aa, and to Pseudomonas putida (R)-3-hydroxydecanoyl-ACP:CoA transacylase PhaG SWALL:PHAG_PSEPU (SWALL:O85207) (295 aa) fasta scores: E(): 8.2e-42, 42.64% id in 272 aa. Almost identical to BPSS1352, 99.666% identity (99.666% ungapped) in 299 aa overlap; 3-hydroxydecanoyl-ACP:CoA transacylase 731348 3096849 BPSS0536 Burkholderia pseudomallei K96243 3-hydroxydecanoyl-ACP:CoA transacylase YP_110557.1 730449 D 272560 CDS YP_110558.1 53721573 3096379 731570..732889 1 NC_006351.1 Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 catalytic subunit B RhlB SWALL:Q51560 (EMBL:L28170) (426 aa) fasta scores: E(): 1.2e-47, 47.54% id in 427 aa, and to Nocardia aerocolonigenes glycosyltransferase RbmA or Ngt SWALL:CAC93713 (EMBL:AF534707) (421 aa) fasta scores: E(): 3.7e-08, 27.35% id in 446 aa. Almost identical to BPSS1351, 99.569% identity (99.569% ungapped) in 464 aa overlap; UDP-glucoronosyl and UDP-glucosyl transferase 732889 3096379 BPSS0537 Burkholderia pseudomallei K96243 UDP-glucoronosyl and UDP-glucosyl transferase YP_110558.1 731570 D 272560 CDS YP_110559.1 53721574 3096380 732886..734472 1 NC_006351.1 Similar to Escherichia coli multidrug resistance protein B EmrB SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 6.9e-88, 45.34% id in 505 aa, and to Burkholderia pseudomallei hypothetical protein SWALL:Q9ZF72 (EMBL:AF110185) (520 aa) fasta scores: E(): 2.7e-114, 56.92% id in 527 aa. CDS is extended at the N-terminus in comparison to some orthologues. Almost identical to BPSS1350, 99.621% identity (99.621% ungapped) in 528 aa overlap; transport protein 734472 3096380 BPSS0538 Burkholderia pseudomallei K96243 transport protein YP_110559.1 732886 D 272560 CDS YP_110560.1 53721575 3095614 734725..735720 1 NC_006351.1 Similar to Shigella flexneri DTDP-rhamnosyl transferase RfbF or sf2099 SWALL:RFBF_SHIFL (SWALL:P37782) (296 aa) fasta scores: E(): 2.7e-15, 25% id in 304 aa, and to Pseudomonas aeruginosa hypothetical protein pa1130 SWALL:Q9I4K5 (EMBL:AE004543) (325 aa) fasta scores: E(): 3.7e-41, 45.51% id in 312 aa. Almost identical to BPSS1349, 99.085% identity (99.085% ungapped) in 328 aa overlap; hypothetical protein 735720 3095614 BPSS0539 Burkholderia pseudomallei K96243 hypothetical protein YP_110560.1 734725 D 272560 CDS YP_110561.1 53721576 3096736 736025..737608 1 NC_006351.1 Similar to Xanthomonas axonopodis outer membrane efflux protein xac1444 SWALL:AAM36315 (EMBL:AE011776) (496 aa) fasta scores: E(): 7.2e-38, 38.41% id in 505 aa, and to Burkholderia cepacia fusaric acid resistance protein fusa precursor FusA SWALL:FUSA_BURCE (SWALL:P24126) (530 aa) fasta scores: E(): 9.3e-28, 31.74% id in 526 aa. Identical to BPSS1348, 100.000% identity (100.000% ungapped) in 527 aa overlap; outer membrane efflux protein 737608 3096736 BPSS0540 Burkholderia pseudomallei K96243 outer membrane efflux protein YP_110561.1 736025 D 272560 CDS YP_110562.1 53721577 3096737 738188..739354 1 NC_006351.1 Similar to Escherichia coli multidrug resistance protein A EmrA SWALL:EMRA_ECOLI (SWALL:P27303) (390 aa) fasta scores: E(): 9e-46, 40.51% id in 390 aa, and to Xanthomonas campestris multidrug resistance efflux pump xcc1399 SWALL:AAM40697 (EMBL:AE012239) (397 aa) fasta scores: E(): 5.4e-50, 44.44% id in 387 aa. Almost identical to BPSS1347, 99.742% identity (99.742% ungapped) in 388 aa overlap; HlyD family secretion protein 739354 3096737 BPSS0541 Burkholderia pseudomallei K96243 HlyD family secretion protein YP_110562.1 738188 D 272560 CDS YP_110563.1 53721578 3095630 complement(739867..741531) 1 NC_006351.1 Similar to Hansenula anomala invertase precursor INV1 SWALL:INV1_HANAN (SWALL:P40912) (550 aa) fasta scores: E(): 4.3e-41, 31.59% id in 519 aa, and to Acetobacter diazotrophicus levanase precursor LsdB SWALL:Q9RBJ1 (EMBL:L41732) (534 aa) fasta scores: E(): 1.4e-105, 53.09% id in 501 aa; glycosyl hydrolase 741531 3095630 BPSS0542 Burkholderia pseudomallei K96243 glycosyl hydrolase YP_110563.1 739867 R 272560 CDS YP_110564.1 53721579 3095602 complement(741664..743229) 1 NC_006351.1 Similar to Acetobacter diazotrophicus levansucrase precursor LsdA SWALL:SACB_ACEDI (SWALL:Q43998) (584 aa) fasta scores: E(): 4.8e-129, 66.8% id in 476 aa, and to Arthrobacter sp. K-1 beta-fructofuranosidase Bff SWALL:Q8VW87 (EMBL:AB062134) (578 aa) fasta scores: E(): 7.6e-109, 56.27% id in 526 aa; levansucrase 743229 3095602 BPSS0543 Burkholderia pseudomallei K96243 levansucrase YP_110564.1 741664 R 272560 CDS YP_110565.1 53721580 3095603 743418..744434 1 NC_006351.1 Similar to Escherichia coli raffinose operon repressor RafR SWALL:RAFR_ECOLI (SWALL:P21867) (335 aa) fasta scores: E(): 3.5e-39, 38.85% id in 332 aa, and to Rhizobium meliloti transcription regulator AglR or r00694 or smc03060 SWALL:AGLR_RHIME (SWALL:Q9Z3R4) (356 aa) fasta scores: E(): 4.5e-37, 40.18% id in 321 aa; LacI family regulatory protein 744434 3095603 BPSS0544 Burkholderia pseudomallei K96243 LacI family regulatory protein YP_110565.1 743418 D 272560 CDS YP_110566.1 53721581 3095054 744930..746129 1 NC_006351.1 Similar to Pseudomonas putida glutathione-independent formaldehyde dehydrogenase FdhA SWALL:FADH_PSEPU (SWALL:P46154) (398 aa) fasta scores: E(): 1.2e-121, 80.9% id in 398 aa, and to Ralstonia solanacearum probable glutathione-independent formaldehyde dehydrogenase oxidoreductase rsp0053 or rs02028 SWALL:Q8XTQ3 (EMBL:AL646076) (398 aa) fasta scores: E(): 2e-142, 92.98% id in 399 aa; glutathione-independent formaldehyde dehydrogenase 746129 fdhA 3095054 fdhA Burkholderia pseudomallei K96243 glutathione-independent formaldehyde dehydrogenase YP_110566.1 744930 D 272560 CDS YP_110567.1 53721582 3094917 complement(746307..747332) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 5.7e-114, 85.71% id in 336 aa, and to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 1.5e-65, 55.12% id in 312 aa. Similar to BPSS1424, 56.913% identity (57.097% ungapped) in 311 aa overlap; AraC family transcriptional regulator 747332 3094917 BPSS0546 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110567.1 746307 R 272560 CDS YP_110568.1 53721583 3096429 747751..749040 1 NC_006351.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 749040 glyA 3096429 glyA Burkholderia pseudomallei K96243 serine hydroxymethyltransferase YP_110568.1 747751 D 272560 CDS YP_110569.1 53721584 3095707 749113..750084 1 NC_006351.1 Similar to Ralstonia solanacearum dipeptidase rsp0056 or rs02031 SWALL:Q8XTQ0 (EMBL:AL646076) (323 aa) fasta scores: E(): 1.7e-119, 90.4% id in 323 aa, and to Pseudomonas aeruginosa hypothetical protein pa5396 SWALL:Q9HTG8 (EMBL:AE004952) (325 aa) fasta scores: E(): 1.1e-94, 71.47% id in 319 aa; family M19 non-peptidase 750084 3095707 BPSS0548 Burkholderia pseudomallei K96243 family M19 non-peptidase YP_110569.1 749113 D 272560 CDS YP_110570.1 53721585 3095708 750235..750768 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp0057 or rs02032 SWALL:Q8XTP9 (EMBL:AL646076) (177 aa) fasta scores: E(): 8.8e-72, 90.85% id in 175 aa, and to Pseudomonas aeruginosa hypothetical protein pa5397 SWALL:Q9HTG7 (EMBL:AE004952) (176 aa) fasta scores: E(): 1e-39, 57.71% id in 175 aa; hypothetical protein 750768 3095708 BPSS0549 Burkholderia pseudomallei K96243 hypothetical protein YP_110570.1 750235 D 272560 CDS YP_110571.1 53721586 3095620 750829..752892 1 NC_006351.1 Similar to Rhizobium meliloti probable N-methylproline demethylase StcD or StcD2 or rb1010 or smb21570 SWALL:STCD_RHIME (SWALL:O87278) (678 aa) fasta scores: E(): 2.6e-101, 43.61% id in 681 aa, and to Ralstonia solanacearum probable stachydrine utilization oxidoreductase rsp0058 or rs02033 SWALL:Q8XTP8 (EMBL:AL646076) (687 aa) fasta scores: E(): 0, 94.46% id in 687 aa; NADH:flavin oxidoreductase / NADH oxidase 752892 3095620 BPSS0550 Burkholderia pseudomallei K96243 NADH:flavin oxidoreductase / NADH oxidase YP_110571.1 750829 D 272560 CDS YP_110572.1 53721587 3095675 752895..754820 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0059 or rs02034 SWALL:Q8XTP7 (EMBL:AL646076) (641 aa) fasta scores: E(): 1.6e-211, 86.73% id in 641 aa. C-terminal region os weakly similar to Escherichia coli anaerobic glycerol-3-phosphate dehydrogenase subunit C GlpC SWALL:GLPC_ECOLI (SWALL:P13034) (396 aa) fasta scores: E(): 0.0036, 22.41% id in 415 aa; hypothetical protein 754820 3095675 BPSS0551 Burkholderia pseudomallei K96243 hypothetical protein YP_110572.1 752895 D 272560 CDS YP_110573.1 53721588 3095676 754825..755997 1 NC_006351.1 CDS is extended at the N-terminus in comparison to most orthologues. C-terminal region is similar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit EtfA or EtfL SWALL:ETFA_BRAJA (SWALL:P53573) (314 aa) fasta scores: E(): 3.2e-14, 30.35% id in 313 aa. Full length CDS is similar to Ralstonia solanacearum electron transfer flavoprotein alpha-subunit rsp0060 or rs02035 SWALL:Q8XTP6 (EMBL:AL646076) (392 aa) fasta scores: E(): 2.1e-98, 71.89% id in 395 aa. Possible alternative translational start site; electron transfer flavoprotein subunit alpha 755997 3095676 BPSS0552 Burkholderia pseudomallei K96243 electron transfer flavoprotein subunit alpha YP_110573.1 754825 D 272560 CDS YP_110574.1 53721589 3096931 755994..756779 1 NC_006351.1 C-terminus is similar to the C-terminal region of Methylophilus methylotrophus electron transfer flavoprotein beta-subunit EtfB SWALL:ETFB_METME (SWALL:P53570) (264 aa) fasta scores: E(): 0.11, 27.92% id in 222 aa. Full length CDS is similar to Ralstonia solanacearum electron transfer flavoprotein beta-subunit rsp0061 or rs02036 SWALL:Q8XTP5 (EMBL:AL646076) (261 aa) fasta scores: E(): 6.7e-70, 77.39% id in 261 aa; electron transfer flavoprotein subunit beta 756779 3096931 BPSS0553 Burkholderia pseudomallei K96243 electron transfer flavoprotein subunit beta YP_110574.1 755994 D 272560 CDS YP_110575.1 53721590 3097047 756804..758072 1 NC_006351.1 Similar to Ralstonia solanacearum dioxygenase rsp0062 or rs02037 SWALL:Q8XTP4 (EMBL:AL646076) (414 aa) fasta scores: E(): 9.8e-153, 84.42% id in 411 aa, and to Pseudomonas aeruginosa probable ring hydroxylating dioxygenase, alpha-subunit pa5410 SWALL:Q9HTF4 (EMBL:AE004953) (429 aa) fasta scores: E(): 4e-73, 43.81% id in 420 aa. Possible alternative translational start site; (Fe-S)-binding protein 758072 3097047 BPSS0554 Burkholderia pseudomallei K96243 (Fe-S)-binding protein YP_110575.1 756804 D 272560 CDS YP_110576.1 53721591 3097048 758093..759238 1 NC_006351.1 Similar to Ralstonia solanacearum probable ferredoxin oxidoreductase rsp0063 or rs02038 SWALL:Q8XTP3 (EMBL:AL646076) (382 aa) fasta scores: E(): 2.7e-133, 84.81% id in 382 aa, and to the C-terminal region of Escherichia coli probable phenylacetic acid degradation NADH oxidoreductase PaaE paae or b1392 SWALL:PAAE_ECOLI (SWALL:P76081) (356 aa) fasta scores: E(): 1.3e-21, 31.56% id in 358 aa; ferredoxin oxidoreductase 759238 3097048 BPSS0555 Burkholderia pseudomallei K96243 ferredoxin oxidoreductase YP_110576.1 758093 D 272560 CDS YP_110577.1 53721592 3095782 759348..760211 1 NC_006351.1 Similar to Ralstonia solanacearum glycine betaine transmembrane and periplasmic ABC transporter protein rsp0064 or rs02039 SWALL:Q8XTP2 (EMBL:AL646076) (289 aa) fasta scores: E(): 1.3e-89, 80.56% id in 283 aa. C-terminal region is similar to the N-terminal region of Bacillus subtilis glycine betaine-binding protein precursor opuaC SWALL:OPAC_BACSU (SWALL:P46922) (293 aa) fasta scores: E(): 2.9e-21, 38.63% id in 176 aa; hypothetical protein 760211 3095782 BPSS0556 Burkholderia pseudomallei K96243 hypothetical protein YP_110577.1 759348 D 272560 CDS YP_110578.1 53721593 3095539 760392..762047 1 NC_006351.1 Similar to Rhizobium meliloti permease r00105 or smc04147 SWALL:Q92T75 (EMBL:AL591782) (594 aa) fasta scores: E(): 8e-72, 46.73% id in 597 aa, and weakly similar to Mus musculus cystine/glutamate transporter SLC7A11 SWALL:XCT_MOUSE (SWALL:Q9WTR6) (502 aa) fasta scores: E(): 5.7e-05, 24.4% id in 549 aa; hypothetical protein 762047 3095539 BPSS0557 Burkholderia pseudomallei K96243 hypothetical protein YP_110578.1 760392 D 272560 CDS YP_110579.1 53721594 3095540 complement(762134..763009) 1 NC_006351.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 763009 3095540 BPSS0558 Burkholderia pseudomallei K96243 formyltetrahydrofolate deformylase YP_110579.1 762134 R 272560 CDS YP_110580.1 53721595 3096278 complement(763153..764052) 1 NC_006351.1 Similar to Escherichia coli glycine cleavage system transcriptional activator GcvA SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.9e-32, 37.5% id in 296 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0032 SWALL:Q9I798 (EMBL:AE004442) (304 aa) fasta scores: E(): 9.4e-40, 43.53% id in 294 aa; LysR family transcriptional regulator 764052 3096278 BPSS0559 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110580.1 763153 R 272560 CDS YP_110581.1 53721596 3096948 764188..765741 1 NC_006351.1 Similar to Rhizobium meliloti choline-sulfatase BetC SWALL:BETC_RHIME (SWALL:O69787) (512 aa) fasta scores: E(): 8.2e-93, 46.96% id in 511 aa, and to Pseudomonas aeruginosa choline sulfatase pa0031 SWALL:Q9I799 (EMBL:AE004442) (503 aa) fasta scores: E(): 2.2e-126, 61.06% id in 506 aa; choline-sulfatase 765741 3096948 BPSS0560 Burkholderia pseudomallei K96243 choline-sulfatase YP_110581.1 764188 D 272560 CDS YP_110582.1 53721597 3096949 765777..766775 1 NC_006351.1 Similar to Brucella melitensis glycine betaine/L-proline-binding protein bmei0441 SWALL:Q8YIK3 (EMBL:AE009487) (326 aa) fasta scores: E(): 5.5e-48, 43.36% id in 309 aa. C-terminal region is similar to the N-terminal region of Bacillus subtilis glycine betaine-binding protein precursor opuaC SWALL:OPAC_BACSU (SWALL:P46922) (293 aa) fasta scores: E(): 6.3e-07, 24.58% id in 179 aa; hypothetical protein 766775 3096949 BPSS0561 Burkholderia pseudomallei K96243 hypothetical protein YP_110582.1 765777 D 272560 CDS YP_110583.1 53721598 3096945 767003..768145 1 NC_006351.1 Similar to Burkholderia cepacia major porin protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 1e-29, 38.07% id in 394 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 1.1e-32, 39.34% id in 399 aa; porin protein 768145 3096945 BPSS0562 Burkholderia pseudomallei K96243 porin protein YP_110583.1 767003 D 272560 CDS YP_110584.1 53721599 3096279 complement(768200..769426) 1 NC_006351.1 Similar to the N-terminal region of Vibrio proteolyticus bacterial leucyl aminopeptidase precursor SWALL:AMPX_VIBPR (SWALL:Q01693) (504 aa) fasta scores: E(): 1.8e-62, 45.27% id in 402 aa, and to the full length Aeromonas punctata aminopeptidase ApaC SWALL:O82996 (EMBL:AB015725) (393 aa) fasta scores: E(): 2.6e-61, 46.63% id in 401 aa; aminopeptidase 769426 3096279 BPSS0563 Burkholderia pseudomallei K96243 aminopeptidase YP_110584.1 768200 R 272560 CDS YP_110585.1 53721600 3096280 complement(769544..771247) 1 NC_006351.1 Similar to Bacillus stearothermophilus thermolysin precursor NprT SWALL:THER_BACST (SWALL:P06874) (548 aa) fasta scores: E(): 0.00076, 23.78% id in 597 aa, and to Alicyclobacillus acidocaldarius thermolysin precursor SWALL:Q43880 (EMBL:U07824) (546 aa) fasta scores: E(): 2.5e-05, 24.32% id in 592 aa; thermolysin metallopeptidase 771247 3096280 BPSS0564 Burkholderia pseudomallei K96243 thermolysin metallopeptidase YP_110585.1 769544 R 272560 CDS YP_110586.1 53721601 3095853 complement(771719..772663) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa5389 SWALL:Q9HTH5 (EMBL:AE004951) (336 aa) fasta scores: E(): 5.2e-77, 62.58% id in 310 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5380 SWALL:Q9HTI4 (EMBL:AE004950) (367 aa) fasta scores: E(): 1.5e-48, 43.73% id in 311 aa; AraC family transcriptional regulator 772663 3095853 BPSS0565 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110586.1 771719 R 272560 CDS YP_110587.1 53721602 3095242 772931..773881 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5388 SWALL:Q9HTH6 (EMBL:AE004951) (312 aa) fasta scores: E(): 1.2e-60, 50% id in 302 aa. C-terminal region is similar to the N-terminal region of Bacillus subtilis glycine betaine-binding protein precursor OpaC SWALL:OPAC_BACSU (SWALL:P46922) (293 aa) fasta scores: E(): 7.4e-10, 28.24% id in 177 aa. Similar to BPSS1423, 64.664% identity (64.664% ungapped) in 283 aa overlap; lipoprotein 773881 3095242 BPSS0566 Burkholderia pseudomallei K96243 lipoprotein YP_110587.1 772931 D 272560 CDS YP_110588.1 53721603 3095243 773964..774893 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5387 SWALL:Q9HTH7 (EMBL:AE004951) (294 aa) fasta scores: E(): 8.5e-96, 83.05% id in 295 aa, and to Streptomyces coelicolor hypothetical protein sco6298 or scbac8d1.11c SWALL:Q93RX4 (EMBL:AL939127) (308 aa) fasta scores: E(): 1.3e-77, 66.88% id in 305 aa; hypothetical protein 774893 3095243 BPSS0567 Burkholderia pseudomallei K96243 hypothetical protein YP_110588.1 773964 D 272560 CDS YP_110589.1 53721604 3095253 775008..775973 1 NC_006351.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 775973 3095253 BPSS0568 Burkholderia pseudomallei K96243 3-hydroxybutyryl-CoA dehydrogenase YP_110589.1 775008 D 272560 CDS YP_110590.1 53721605 3096956 775991..776473 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5385 SWALL:Q9HTH9 (EMBL:AE004951) (159 aa) fasta scores: E(): 1.6e-29, 54.19% id in 155 aa, and to Rhizobium loti hypothetical protein mlr1489 SWALL:Q98KG3 (EMBL:AP002997) (159 aa) fasta scores: E(): 9.8e-17, 39.31% id in 145 aa; hypothetical protein 776473 3096956 BPSS0569 Burkholderia pseudomallei K96243 hypothetical protein YP_110590.1 775991 D 272560 CDS YP_110591.1 53721606 3096957 776509..777468 1 NC_006351.1 Similar to Escherichia coli acetyl esterase Aes SWALL:AES_ECOLI (SWALL:P23872) (319 aa) fasta scores: E(): 3.8e-11, 29.96% id in 297 aa, and to Rhizobium loti lipase mll4497 SWALL:Q98DY0 (EMBL:AP003004) (319 aa) fasta scores: E(): 2.1e-23, 43.46% id in 306 aa; hypothetical protein 777468 3096957 BPSS0570 Burkholderia pseudomallei K96243 hypothetical protein YP_110591.1 776509 D 272560 CDS YP_110592.1 53721607 3095861 complement(777815..778123) 1 NC_006351.1 No significant database matches. Similar to BPSS1748, 52.525% identity (57.143% ungapped) in 99 aa overlap, and to BPSS0881, 50.000% identity (55.446% ungapped) in 112 aa overlap; hypothetical protein 778123 3095861 BPSS0571 Burkholderia pseudomallei K96243 hypothetical protein YP_110592.1 777815 R 272560 CDS YP_110593.1 53721608 3096678 complement(778357..779346) 1 NC_006351.1 Similar to Homo sapiens androgen-regulated short-chain dehydrogenase/reductase 1 ARSDR1 SWALL:Q9NRW0 (EMBL:AF167438) (318 aa) fasta scores: E(): 1.8e-28, 38.56% id in 293 aa, and to Pseudomonas aeruginosa probable short chain dehydrogenase pa5031 SWALL:Q9HUD8 (EMBL:AE004916) (309 aa) fasta scores: E(): 1.7e-70, 61.11% id in 306 aa; short-chain dehydrogenase 779346 3096678 BPSS0572 Burkholderia pseudomallei K96243 short-chain dehydrogenase YP_110593.1 778357 R 272560 CDS YP_110594.1 53721609 3096679 complement(779565..779855) 1 NC_006351.1 Doubtful CDS. No significant database matches; hypothetical protein 779855 3096679 BPSS0573 Burkholderia pseudomallei K96243 hypothetical protein YP_110594.1 779565 R 272560 CDS YP_110595.1 53721610 3096875 complement(780625..781869) 1 NC_006351.1 Similar to Escherichia coli D-amino acid dehydrogenase small subunit DadA or DadR SWALL:DADA_ECOLI (SWALL:P29011) (432 aa) fasta scores: E(): 3.7e-17, 28.78% id in 410 aa, and to Rhizobium meliloti oxidoreductase r00742 or smc00797 SWALL:Q92RU9 (EMBL:AL591784) (417 aa) fasta scores: E(): 3.2e-77, 52.64% id in 416 aa; FAD dependent oxidoreductase 781869 3096875 BPSS0574 Burkholderia pseudomallei K96243 FAD dependent oxidoreductase YP_110595.1 780625 R 272560 CDS YP_110596.1 53721611 3096414 782752..783867 1 NC_006351.1 Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 5.9e-79, 59.23% id in 368 aa, and to Escherichia coli Leu/Ile/Val-binding protein precursor LivJ b3460 SWALL:LIVJ_ECOLI (SWALL:P02917) (367 aa) fasta scores: E(): 2.3e-65, 50.41% id in 361 aa; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor 783867 braC 3096414 braC Burkholderia pseudomallei K96243 leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor YP_110596.1 782752 D 272560 CDS YP_110597.1 53721612 3096394 784061..784987 1 NC_006351.1 Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport system permease BraD SWALL:BRAD_PSEAE (SWALL:P21627) (307 aa) fasta scores: E(): 1.9e-64, 59.6% id in 302 aa, and to Escherichia coli high-affinity branched-chain amino acid transport system permease LivH SWALL:LIVH_ECOLI (SWALL:P08340) (308 aa) fasta scores: E(): 5.3e-62, 56.91% id in 311 aa; high-affinity branched-chain amino acid transport system permease 784987 braD 3096394 braD Burkholderia pseudomallei K96243 high-affinity branched-chain amino acid transport system permease YP_110597.1 784061 D 272560 CDS YP_110598.2 161723220 3096605 784996..786267 1 NC_006351.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 786267 livM 3096605 livM Burkholderia pseudomallei K96243 leucine/isoleucine/valine transporter permease subunit YP_110598.2 784996 D 272560 CDS YP_110599.1 53721614 3096606 786264..787037 1 NC_006351.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 787037 livG 3096606 livG Burkholderia pseudomallei K96243 leucine/isoleucine/valine transporter ATP-binding subunit YP_110599.1 786264 D 272560 CDS YP_110600.1 53721615 3096548 787037..787738 1 NC_006351.1 Similar to Pseudomonas aeruginosa high-affinity branched-chain amino acid transport ATP-binding protein BraG SWALL:BRAG_PSEAE (SWALL:P21630) (233 aa) fasta scores: E(): 1e-52, 65.23% id in 233 aa, and to Escherichia coli high-affinity branched-chain amino acid transport ATP-binding protein LivF SWALL:LIVF_ECOLI (SWALL:P22731) (237 aa) fasta scores: E(): 5.1e-52, 65.66% id in 233 aa. Similar to BPSL0923, 50.215% identity (50.431% ungapped) in 233 aa overlap; high-affinity branched-chain amino acid transport ATP-binding protein 787738 braG 3096548 braG Burkholderia pseudomallei K96243 high-affinity branched-chain amino acid transport ATP-binding protein YP_110600.1 787037 D 272560 CDS YP_110601.1 53721616 3095825 788473..789708 1 NC_006351.1 N-terinal region is similar to the C-terminal region of Pseudomonas aeruginosa protease LasA SWALL:LASA_PSEAE (SWALL:P14789) (418 aa) fasta scores: E(): 6.2e-10, 29.22% id in 308 aa, and to Achromobacter lyticus beta-lytic metalloendopeptidase precursor SWALL:PRLB_ACHLY (SWALL:P27458) (374 aa) fasta scores: E(): 1.2e-08, 28.85% id in 305 aa; hypothetical protein 789708 3095825 BPSS0580 Burkholderia pseudomallei K96243 hypothetical protein YP_110601.1 788473 D 272560 CDS YP_110602.1 53721617 3095373 complement(790031..791485) 1 NC_006351.1 involved in the conversion of chorismate to salicylate; salicylate biosynthesis isochorismate synthase 791485 pchA 3095373 pchA Burkholderia pseudomallei K96243 salicylate biosynthesis isochorismate synthase YP_110602.1 790031 R 272560 CDS YP_110603.1 53721618 3095362 complement(791482..791787) 1 NC_006351.1 catalyzes the second reaction in the pyochelin biosynthetic pathway, the conversion of isochorismate to salicylate and pyruvate.; isochorismate-pyruvate lyase 791787 pchB 3095362 pchB Burkholderia pseudomallei K96243 isochorismate-pyruvate lyase YP_110603.1 791482 R 272560 CDS YP_110604.1 53721619 3095359 complement(791784..792557) 1 NC_006351.1 Similar to Pseudomonas aeruginosa pyochelin biosynthetic protein PchC SWALL:Q9HWG2 (EMBL:AE004840) (251 aa) fasta scores: E(): 5.5e-46, 56.17% id in 235 aa, and to Streptomyces avermitilis thioesterase SWALL:Q93H55 (EMBL:AB070951) (249 aa) fasta scores: E(): 1.7e-33, 42.38% id in 243 aa; pyochelin biosynthetic protein 792557 pchC 3095359 pchC Burkholderia pseudomallei K96243 pyochelin biosynthetic protein YP_110604.1 791784 R 272560 CDS YP_110605.1 53721620 3095360 complement(792554..794197) 1 NC_006351.1 Similar to Pseudomonas aeruginosa salicyl-AMP ligase PchD SWALL:Q9RFM9 (EMBL:AF184620) (547 aa) fasta scores: E(): 1.6e-152, 69.33% id in 538 aa, and to Bacillus subtilis 2,3-dihydroxybenzoate-AMP ligase DhbE or EntE SWALL:DHBE_BACSU (SWALL:P40871) (539 aa) fasta scores: E(): 2.8e-112, 54.63% id in 529 aa; salicyl-AMP ligase 794197 pchD 3095360 pchD Burkholderia pseudomallei K96243 salicyl-AMP ligase YP_110605.1 792554 R 272560 CDS YP_110606.1 53721621 3097119 794837..795778 1 NC_006351.1 Similar to Pseudomonas aeruginosa AraC family activator of pyochelin and ferripyochelin receptor synthesis PchR SWALL:PCHR_PSEAE (SWALL:P40883) (296 aa) fasta scores: E(): 1.4e-78, 67.34% id in 297 aa; AraC family transcriptional regulator 795778 pchR 3097119 pchR Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110606.1 794837 D 272560 CDS YP_110607.1 53721622 3097182 795905..800410 1 NC_006351.1 Similar to Pseudomonas aeruginosa pyochelin synthetase PchE SWALL:Q9RFM8 (EMBL:AF184621) (1438 aa) fasta scores: E(): 0, 57.14% id in 1484 aa, and to Yersinia pestis yersiniabactin biosynthetic protein Irp2 or ypo1911 SWALL:Q8ZF24 (EMBL:AJ414150) (2035 aa) fasta scores: E(): 4.3e-111, 35.92% id in 1495 aa; pyochelin synthetase 800410 pchE 3097182 pchE Burkholderia pseudomallei K96243 pyochelin synthetase YP_110607.1 795905 D 272560 CDS YP_110608.1 53721623 3097195 800407..806454 1 NC_006351.1 Similar to Pseudomonas aeruginosa pyochelin synthetase PchF SWALL:Q9RFM7 (EMBL:AF184622) (1809 aa) fasta scores: E(): 1.1e-173, 56.86% id in 2019 aa. Weakly similar to Yersinia pestis yersiniabactin biosynthetic protein Irp2 or ypo1911 SWALL:Q8ZF24 (EMBL:AJ414150) (2035 aa) fasta scores: E(): 3.8e-91, 29% id in 1958 aa; pyochelin synthetase 806454 pchF 3097195 pchF Burkholderia pseudomallei K96243 pyochelin synthetase YP_110608.1 800407 D 272560 CDS YP_110609.1 53721624 3097196 806451..807506 1 NC_006351.1 Similar to Pseudomonas aeruginosa reductase required pyochelin biosynthesis PchG SWALL:Q9HWG5 (EMBL:AE004839) (349 aa) fasta scores: E(): 5e-68, 56.81% id in 345 aa, and to Yersinia enterocolitica Irp3 protein SWALL:O54512 (EMBL:Y12527) (365 aa) fasta scores: E(): 4.5e-15, 27.95% id in 347 aa; pyochelin biosynthetic protein 807506 pchG 3097196 pchG Burkholderia pseudomallei K96243 pyochelin biosynthetic protein YP_110609.1 806451 D 272560 CDS YP_110610.1 53721625 3095338 807503..809230 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa4223 or PchH SWALL:Q9HWG6 (EMBL:AE004839) (570 aa) fasta scores: E(): 3.1e-92, 56.09% id in 574 aa, and to Streptomyces coelicolor ABC transporter ATP-binding protein SCO7689 or SC4C2.24 SWALL:Q9EWN8 (EMBL:AL939132) (608 aa) fasta scores: E(): 5.1e-53, 39.93% id in 571 aa; ATP-binding component of ABC transporter 809230 pchH 3095338 pchH Burkholderia pseudomallei K96243 ATP-binding component of ABC transporter YP_110610.1 807503 D 272560 CDS YP_110611.1 53721626 3097118 809227..811011 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa4222 SWALL:Q9HWG7 (EMBL:AE004839) (574 aa) fasta scores: E(): 2.8e-97, 59.71% id in 556 aa, and to Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein rv1349 or mt1392 or mtcy02b10.13 SWALL:YD49_MYCTU (SWALL:Q11019) (579 aa) fasta scores: E(): 1.2e-33, 32.35% id in 578 aa; ABC transporter ATP-binding protein 811011 pchI 3097118 pchI Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_110611.1 809227 D 272560 CDS YP_110612.1 53721627 3095369 811088..813340 1 NC_006351.1 Similar to Pseudomonas aeruginosa Fe(III)-pyochelin receptor precursor FptA SWALL:FPTA_PSEAE (SWALL:P42512) (720 aa) fasta scores: E(): 1.5e-172, 63.05% id in 674 aa, and to the C-terminal region of Pseudomonas aeruginosa ferripyoverdine receptor precursor FpvA SWALL:FPVA_PSEAE (SWALL:P48632) (815 aa) fasta scores: E(): 1.9e-62, 31.42% id in 732 aa. Poor similarity to the P. aeruginosa FptA protein in the N-terminal region. CDS lacks a N-terminal signal sequence, effect on the function of the CDS is not known; Fe(III)-pyochelin receptor 813340 fptA 3095369 fptA Burkholderia pseudomallei K96243 Fe(III)-pyochelin receptor YP_110612.1 811088 D 272560 CDS YP_110613.1 53721628 3095826 813340..813606 1 NC_006351.1 Similar to Pseudomonas aeruginosa FptB protein precursor pa4220 SWALL:FPTB_PSEAE (SWALL:P42513) (93 aa) fasta scores: E(): 0.00021, 38.82% id in 85 aa; hypothetical protein 813606 3095826 BPSS0592 Burkholderia pseudomallei K96243 hypothetical protein YP_110613.1 813340 D 272560 CDS YP_110614.1 53721629 3095692 813608..815122 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0801 SWALL:Q9I5D7 (EMBL:AE004515) (506 aa) fasta scores: E(): 1.2e-18, 26.73% id in 520 aa. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa4219 SWALL:Y6B9_PSEAE (SWALL:P42514) (394 aa) fasta scores: E(): 9e-68, 53.62% id in 386 aa; iron-regulated membrane protein 815122 3095692 BPSS0593 Burkholderia pseudomallei K96243 iron-regulated membrane protein YP_110614.1 813608 D 272560 CDS YP_110615.1 53721630 3097035 815139..816410 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transporter pa4218 SWALL:Q9HWG8 (EMBL:AE004838) (414 aa) fasta scores: E(): 2.8e-105, 71.56% id in 408 aa. N-terminal region is similar to the N-terminal region of Escherichia coli AmpG protein SWALL:AMPG_ECOLI (SWALL:P36670) (491 aa) fasta scores: E(): 7e-12, 24.41% id in 344 aa; hypothetical protein 816410 3097035 BPSS0594 Burkholderia pseudomallei K96243 hypothetical protein YP_110615.1 815139 D 272560 CDS YP_110616.1 53721631 3097036 complement(816784..817074) 1 NC_006351.1 Similar to Synechococcus sp. ferredoxin I PetF SWALL:FER1_SYNP2 (SWALL:P31965) (96 aa) fasta scores: E(): 1.3e-07, 37.93% id in 87 aa, and to Equisetum telmateia ferredoxin I SWALL:FER1_EQUTE (SWALL:P00234) (95 aa) fasta scores: E(): 6.8e-08, 44.3% id in 79 aa; (2Fe-2S)-binding protein 817074 3097036 BPSS0595 Burkholderia pseudomallei K96243 (2Fe-2S)-binding protein YP_110616.1 816784 R 272560 CDS YP_110617.1 53721632 3095969 complement(817491..819431) 1 NC_006351.1 Similar to Alcaligenes eutrophus acetoin catabolism regulatory protein AcoR SWALL:ACOR_ALCEU (SWALL:P28614) (668 aa) fasta scores: E(): 1.1e-63, 38.95% id in 652 aa, and to Xanthomonas axonopodis transcriptional regulator xac0654 SWALL:AAM35543 (EMBL:AE011694) (661 aa) fasta scores: E(): 2.8e-62, 40.25% id in 641 aa; Fis family transcriptional regulator 819431 3095969 BPSS0596 Burkholderia pseudomallei K96243 Fis family transcriptional regulator YP_110617.1 817491 R 272560 CDS YP_110618.1 53721633 3096451 819701..819895 1 NC_006351.1 Similar to an internal region of Chlorobium tepidum hypothetical protein CT1731 SWALL:Q8KBQ3 (EMBL:AE012927) (263 aa) fasta scores: E(): 0.99, 35.48% id in 62 aa. Possible gene remnant; hypothetical protein 819895 3096451 BPSS0597 Burkholderia pseudomallei K96243 hypothetical protein YP_110618.1 819701 D 272560 CDS YP_110619.1 53721634 3096452 820578..820865 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1512 or rs03792 SWALL:Q8XZ92 (EMBL:AL646065) (92 aa) fasta scores: E(): 3.5e-11, 50.57% id in 87 aa, and to Ralstonia solanacearum hypothetical protein rsc1590 or rs03952 SWALL:Q8XZ16 (EMBL:AL646065) (95 aa) fasta scores: E(): 0.042, 36.47% id in 85 aa. Similar to BPSS0833, 59.140% identity (60.440% ungapped) in 93 aa overlap; hypothetical protein 820865 3096452 BPSS0598 Burkholderia pseudomallei K96243 hypothetical protein YP_110619.1 820578 D 272560 CDS YP_110620.1 53721635 3095802 820930..821088 1 NC_006351.1 Similar to Oryza sativa protein P0432C03.16 SWALL:Q8S9Q3 (EMBL:AP004031) (56 aa) fasta scores: E(): 2, 39.62% id in 53 aa; hypothetical protein 821088 3095802 BPSS0599 Burkholderia pseudomallei K96243 hypothetical protein YP_110620.1 820930 D 272560 CDS YP_110621.1 53721636 3097032 821085..821369 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll4983 SWALL:Q98CV6 (EMBL:AP003005) (281 aa) fasta scores: E(): 7.3, 34.88% id in 86 aa. Possible gene remnant; hypothetical protein 821369 3097032 BPSS0600 Burkholderia pseudomallei K96243 hypothetical protein YP_110621.1 821085 D 272560 CDS YP_110622.1 53721637 3097033 complement(821835..823136) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp1678 or rs02237 SWALL:Q8XPG3 (EMBL:AL646086) (434 aa) fasta scores: E(): 1.3e-123, 74.76% id in 432 aa, and to Comamonas acidovorans xanthine/uracil permease XprA SWALL:Q8RLB9 (EMBL:AY082333) (433 aa) fasta scores: E(): 3.1e-115, 69.14% id in 431 aa; permease 823136 3097033 BPSS0601 Burkholderia pseudomallei K96243 permease YP_110622.1 821835 R 272560 CDS YP_110623.1 53721638 3096114 823379..824005 1 NC_006351.1 Poor database matches. Weakly similar to the C-terminal region of Caulobacter crescentus hypothetical protein cc3240 SWALL:Q9A3G4 (EMBL:AE005988) (318 aa) fasta scores: E(): 1.5e-16, 29.63% id in 189 aa; hypothetical protein 824005 3096114 BPSS0602 Burkholderia pseudomallei K96243 hypothetical protein YP_110623.1 823379 D 272560 CDS YP_110624.1 53721639 3097067 824839..825141 1 NC_006351.1 hypothetical protein 825141 3097067 BPSS0603 Burkholderia pseudomallei K96243 hypothetical protein YP_110624.1 824839 D 272560 CDS YP_110625.1 53721640 3097068 complement(825949..826335) 1 NC_006351.1 C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc0324 or rs03291 SWALL:Q8Y2L1 (EMBL:AL646058) (119 aa) fasta scores: E(): 0.0023, 31.31% id in 99 aa. Possible alternative translational start site; hypothetical protein 826335 3097068 BPSS0604 Burkholderia pseudomallei K96243 hypothetical protein YP_110625.1 825949 R 272560 CDS YP_110626.1 53721641 3095374 complement(827078..827803) 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical membrane protein rb0104 or smb20104 SWALL:Q92X58 (EMBL:AL603642) (252 aa) fasta scores: E(): 9.9e-15, 27.61% id in 239 aa, and to Methanosarcina acetivorans hypothetical protein ma1331 SWALL:Q8TR53 (EMBL:AE010803) (243 aa) fasta scores: E(): 6.6e-09, 24.18% id in 244 aa; hypothetical protein 827803 3095374 BPSS0605 Burkholderia pseudomallei K96243 hypothetical protein YP_110626.1 827078 R 272560 CDS YP_110627.1 53721642 3097057 827920..828819 1 NC_006351.1 Similar to Escherichia coli glycine cleavage system transcriptional activator GcvA SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.3e-25, 30.16% id in 295 aa, and to Pseudomonas fluorescens positive transcriptional regulator PhnR SWALL:O69758 (EMBL:L49465) (299 aa) fasta scores: E(): 1.2e-48, 47.6% id in 292 aa; LysR family regulatory protein 828819 3097057 BPSS0606 Burkholderia pseudomallei K96243 LysR family regulatory protein YP_110627.1 827920 D 272560 CDS YP_110628.1 53721643 3097058 complement(828849..830321) 1 NC_006351.1 Similar to Streptococcus mutans NADP-dependent glyceraldehyde-3-phosphate dehydrogenase GapN SWALL:GAPN_STRMU (SWALL:Q59931) (475 aa) fasta scores: E(): 3.7e-47, 35.91% id in 426 aa, and to Rhizobium meliloti aldehyde dehydrogenase rb0979 or smb21539 SWALL:Q92UV7 (EMBL:AL603645) (485 aa) fasta scores: E(): 2.4e-85, 50.43% id in 456 aa. Also similar to BPSS0349 (482 aa) fasta scores: E(): 3.1e-100, 59.244% identity in 476 aa overlap; aldehyde dehydrogenase 830321 3097058 BPSS0607 Burkholderia pseudomallei K96243 aldehyde dehydrogenase YP_110628.1 828849 R 272560 CDS YP_110629.1 53721644 3095794 complement(830360..831238) 1 NC_006351.1 Similar to Alcaligenes eutrophus alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase TfdA SWALL:TFDA_ALCEU (SWALL:P10088) (287 aa) fasta scores: E(): 1.4e-20, 30.76% id in 260 aa, and to Pseudomonas aeruginosa hypothetical protein pa2310 SWALL:Q9I1G5 (EMBL:AE004657) (295 aa) fasta scores: E(): 5.4e-31, 35.94% id in 281 aa; TauD/TfdA family dioxygenase 831238 3095794 BPSS0608 Burkholderia pseudomallei K96243 TauD/TfdA family dioxygenase YP_110629.1 830360 R 272560 CDS YP_110630.1 53721645 3097101 complement(831174..832406) 1 NC_006351.1 Similar to Streptomyces wedmorensis phosphonopyruvate decarboxylase Fom2 SWALL:Q56190 (EMBL:AB016934) (384 aa) fasta scores: E(): 3.2e-56, 47.48% id in 377 aa, and to Streptomyces viridochromogenes 3-phosphonopyruvate decarboxylase Ppd SWALL:O86938 (EMBL:Y14337) (397 aa) fasta scores: E(): 8.5e-37, 38.51% id in 405 aa; thiamine pyrophosphate enzyme family protein 832406 3097101 BPSS0609 Burkholderia pseudomallei K96243 thiamine pyrophosphate enzyme family protein YP_110630.1 831174 R 272560 CDS YP_110631.1 53721646 3097102 complement(832403..833314) 1 NC_006351.1 Similar to Tetrahymena pyriformis phosphoenolpyruvate phosphomutase precursor PepM SWALL:PEPM_TETPY (SWALL:P33182) (300 aa) fasta scores: E(): 5e-19, 32.05% id in 287 aa, and to he c-terminal region of Bacteroides fragilis phosphoenolpyruvate phosphomutase AepX SWALL:Q9F765 (EMBL:AF285774) (433 aa) fasta scores: E(): 1.7e-55, 52% id in 300 aa; phosphoenolpyruvate phosphomutase 833314 3097102 BPSS0610 Burkholderia pseudomallei K96243 phosphoenolpyruvate phosphomutase YP_110631.1 832403 R 272560 CDS YP_110632.1 53721647 3097083 complement(833782..834690) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3325 SWALL:Q9HYS0 (EMBL:AE004754) (295 aa) fasta scores: E(): 1.1e-59, 48.46% id in 293 aa, and to Streptomyces coelicolor hypothetical protein SCO2221 or SC10B7.16 SWALL:Q9KZ16 (EMBL:AL939111) (296 aa) fasta scores: E(): 6.6e-46, 43.86% id in 285 aa. Similar to BPSS1223, 74.150% identity (74.150% ungapped) in 294 aa overlap; hypothetical protein 834690 3097083 BPSS0611 Burkholderia pseudomallei K96243 hypothetical protein YP_110632.1 833782 R 272560 CDS YP_110633.1 53721648 3097045 complement(834728..836518) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa3324 SWALL:Q9HYS1 (EMBL:AE004754) (592 aa) fasta scores: E(): 9.2e-113, 50.42% id in 593 aa, and to Streptomyces coelicolor oxidoreductase SCO3954 or SCD78.21c SWALL:Q9ZBX8 (EMBL:AL939118) (585 aa) fasta scores: E(): 4.4e-107, 50.69% id in 578 aa; short chain dehydrogenase 836518 3097045 BPSS0612 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_110633.1 834728 R 272560 CDS YP_110634.1 53721649 3097046 complement(836572..837459) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3323 SWALL:Q9HYS2 (EMBL:AE004754) (291 aa) fasta scores: E(): 2.2e-70, 62.72% id in 279 aa, and to the C-terminal region of Streptomyces coelicolor hypothetical protein SCO3955 or SCD78.22c SWALL:Q9ZBX7 (EMBL:AL939118) (339 aa) fasta scores: E(): 5e-56, 53.65% id in 274 aa; hypothetical protein 837459 3097046 BPSS0613 Burkholderia pseudomallei K96243 hypothetical protein YP_110634.1 836572 R 272560 CDS YP_110635.1 53721650 3095500 complement(837977..838747) 1 NC_006351.1 Similar to thye C-terminal region of Homo sapiens erythrocyte band 7 integral membrane protein EPB72 or BND7 SWALL:BAN7_HUMAN (SWALL:P27105) (287 aa) fasta scores: E(): 4.9e-39, 48.99% id in 249 aa, and to the full length Ralstonia solanacearum stomatin-like transmembrane protein rsc0802 or rs05031 SWALL:Q8Y188 (EMBL:AL646061) (249 aa) fasta scores: E(): 2.3e-66, 76.73% id in 245 aa; hypothetical protein 838747 3095500 BPSS0614 Burkholderia pseudomallei K96243 hypothetical protein YP_110635.1 837977 R 272560 CDS YP_110636.1 53721651 3095770 complement(838747..840261) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0803 or rs05027 SWALL:Q8Y187 (EMBL:AL646061) (470 aa) fasta scores: E(): 1.6e-74, 58.71% id in 465 aa, and to Rhizobium meliloti probable membrane protein necessary for nodulation competitiveness NfeD or rb1115 or smb20990 SWALL:Q92UL2 (EMBL:AL603646) (478 aa) fasta scores: E(): 2.6e-56, 47.78% id in 475 aa; hypothetical protein 840261 3095770 BPSS0615 Burkholderia pseudomallei K96243 hypothetical protein YP_110636.1 838747 R 272560 CDS YP_110637.1 53721652 3095771 complement(840345..841472) 1 NC_006351.1 Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 5.3e-14, 25% id in 332 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0653 or rs05569 SWALL:Q8XS28 (EMBL:AL646080) (387 aa) fasta scores: E(): 5.1e-89, 64.85% id in 350 aa. Possible alternative translational start site; AraC family transcriptional regulator 841472 3095771 BPSS0616 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110637.1 840345 R 272560 CDS YP_110638.1 53721653 3097098 841572..842705 1 NC_006351.1 Similar to the C-terminal region of Homo sapiens acyl-CoA dehydrogenase, short-chain specific, mitochondrial precursor ACSDS SWALL:ACDS_HUMAN (SWALL:P16219) (412 aa) fasta scores: E(): 5.4e-64, 48.51% id in 371 aa, and to the full length Ralstonia solanacearum probable acyl-CoA dehydrogenase oxidoreductase rsp0652 or rs05570 SWALL:Q8XS29 (EMBL:AL646080) (377 aa) fasta scores: E(): 2.2e-119, 79.57% id in 377 aa; acyl-CoA dehydrogenase 842705 3097098 BPSS0617 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_110638.1 841572 D 272560 CDS YP_110639.1 53721654 3096614 843109..844812 1 NC_006351.1 Similar to Ralstonia solanacearum probable acetyl-coenzyme A synthetase rsp0651 or rs05571 SWALL:Q8XS30 (EMBL:AL646080) (567 aa) fasta scores: E(): 2.8e-165, 75.22% id in 561 aa, and to Streptomyces coelicolor acetyl-coenzyme A synthetase SCO6195 or SC2G5.16 SWALL:Q9Z5A7 (EMBL:AL939126) (558 aa) fasta scores: E(): 1.1e-118, 58.46% id in 561 aa; AMP-binding protein 844812 3096614 BPSS0618 Burkholderia pseudomallei K96243 AMP-binding protein YP_110639.1 843109 D 272560 CDS YP_110640.1 53721655 3095313 844881..846410 1 NC_006351.1 Similar to Pseudomonas aeruginosa methylmalonate-semialdehyde dehydrogenase [acylating] MmsA SWALL:MMSA_PSEAE (SWALL:P28810) (496 aa) fasta scores: E(): 6.6e-114, 58.46% id in 496 aa, and to Ralstonia solanacearum probable methylmalonate-semialdehyde dehydrogenase oxidoreductase rsp0650 or rs05572 SWALL:Q8XS31 (EMBL:AL646080) (515 aa) fasta scores: E(): 3.2e-161, 80.86% id in 507 aa; methylmalonate-semialdehyde dehydrogenase 846410 mmsA 3095313 mmsA Burkholderia pseudomallei K96243 methylmalonate-semialdehyde dehydrogenase YP_110640.1 844881 D 272560 CDS YP_110641.1 53721656 3096485 846522..847418 1 NC_006351.1 Similar to Pseudomonas aeruginosa 3-hydroxyisobutyrate dehydrogenase MmsB SWALL:MMSB_PSEAE (SWALL:P28811) (298 aa) fasta scores: E(): 1.5e-44, 50.33% id in 300 aa, and to Ralstonia solanacearum probable 3-hydroxyisobutyrate dehydrogenase oxidoreductase rsp0649 or rs05573 SWALL:Q8XS32 (EMBL:AL646080) (298 aa) fasta scores: E(): 1e-72, 73.89% id in 295 aa; 3-hydroxyisobutyrate dehydrogenase 847418 mmsB 3096485 mmsB Burkholderia pseudomallei K96243 3-hydroxyisobutyrate dehydrogenase YP_110641.1 846522 D 272560 CDS YP_110642.1 53721657 3096615 847418..848212 1 NC_006351.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 848212 3096615 BPSS0621 Burkholderia pseudomallei K96243 enoyl-CoA hydratase YP_110642.1 847418 D 272560 CDS YP_110643.1 53721658 3094974 848209..849357 1 NC_006351.1 Similar to Homo sapiens 3-hydroxyisobutyryl-coenzyme A hydrolase SWALL:Q92931 (EMBL:U66669) (381 aa) fasta scores: E(): 3.2e-33, 36.24% id in 367 aa, and to Ralstonia solanacearum enoyl-coenzyme A hydratase rsp0647 or rs05575 SWALL:Q8XS34 (EMBL:AL646080) (390 aa) fasta scores: E(): 9e-102, 71.77% id in 372 aa; enoyl-CoA hydratase 849357 3094974 BPSS0622 Burkholderia pseudomallei K96243 enoyl-CoA hydratase YP_110643.1 848209 D 272560 CDS YP_110644.1 53721659 3095502 complement(849810..851192) 1 NC_006351.1 Similar to Pseudomonas aeruginosa outer membrane protein OprJ SWALL:OPRJ_PSEAE (SWALL:Q51397) (479 aa) fasta scores: E(): 5.6e-27, 30.22% id in 450 aa, and to Ralstonia solanacearum outer membrane multidrug resistance lipoprotein rsc1854 or rs05605 SWALL:Q8XYA8 (EMBL:AL646067) (475 aa) fasta scores: E(): 1.8e-29, 29.55% id in 467 aa; outer membrane efflux protein 851192 3095502 BPSS0623 Burkholderia pseudomallei K96243 outer membrane efflux protein YP_110644.1 849810 R 272560 CDS YP_110645.1 53721660 3096996 complement(851202..853163) 1 NC_006351.1 Similar to Escherichia coli macrolide-specific ABC-type efflux carrier MacB SWALL:MACB_ECOLI (SWALL:P75831) (648 aa) fasta scores: E(): 7.7e-128, 59.35% id in 652 aa, and to Yersinia pestis ABC transporter ATP-binding protein ypo1365 SWALL:Q8ZGD7 (EMBL:AJ414148) (649 aa) fasta scores: E(): 9.7e-131, 59.01% id in 649 aa; macrolide-specific ABC-type efflux carrier 853163 macB 3096996 macB Burkholderia pseudomallei K96243 macrolide-specific ABC-type efflux carrier YP_110645.1 851202 R 272560 CDS YP_110646.1 53721661 3095503 complement(853166..854368) 1 NC_006351.1 Similar to Escherichia coli macrolide-specific efflux protein MacA SWALL:MACA_ECOLI (SWALL:P75830) (371 aa) fasta scores: E(): 3e-34, 43.33% id in 390 aa, and to Pseudomonas syringae periplasmic protein SWALL:Q93NK1 (EMBL:AF372703) (389 aa) fasta scores: E(): 9.4e-54, 52.04% id in 367 aa; drug-efflux protein 854368 3095503 BPSS0625 Burkholderia pseudomallei K96243 drug-efflux protein YP_110646.1 853166 R 272560 CDS YP_110647.1 53721662 3096688 854697..855791 1 NC_006351.1 Similar to Pseudomonas putida alkanesulfonate monooxygenase SsuD or DsuD SWALL:SSUD_PSEPU (SWALL:O85764) (382 aa) fasta scores: E(): 2.8e-19, 28.99% id in 369 aa, and to Pseudomonas aeruginosa hypothetical protein pa3954 SWALL:Q9HX62 (EMBL:AE004813) (364 aa) fasta scores: E(): 1.9e-115, 79.94% id in 364 aa; luciferase-like monooxygenase 855791 3096688 BPSS0626 Burkholderia pseudomallei K96243 luciferase-like monooxygenase YP_110647.1 854697 D 272560 CDS YP_110648.1 53721663 3096094 856170..856892 1 NC_006351.1 Similar to Escherichia coli ribonuclease I precursor Rna or RnsA SWALL:RNI_ECOLI (SWALL:P21338) (268 aa) fasta scores: E(): 4.5e-08, 30.29% id in 241 aa, and to Rhizobium meliloti ribonuclease r02202 or smc02819 SWALL:Q92NJ8 (EMBL:AL591789) (255 aa) fasta scores: E(): 4.3e-16, 30.17% id in 232 aa; ribonuclease 856892 3096094 BPSS0627 Burkholderia pseudomallei K96243 ribonuclease YP_110648.1 856170 D 272560 CDS YP_110649.1 53721664 3095799 complement(857404..858318) 1 NC_006351.1 catalyzes the formation of glutamate from glutamine; glutaminase 858318 glsA 3095799 glsA Burkholderia pseudomallei K96243 glutaminase YP_110649.1 857404 R 272560 CDS YP_110650.1 53721665 3096095 858363..858671 1 NC_006351.1 hypothetical protein 858671 3096095 BPSS0629 Burkholderia pseudomallei K96243 hypothetical protein YP_110650.1 858363 D 272560 CDS YP_110651.1 53721666 3094956 858794..859504 1 NC_006351.1 Similar to Escherichia coli, Salmonella typhimurium, Salmonella typhi and Shigella flexneri transcriptional regulatory protein OmpR SWALL:OMPR_ECOLI (SWALL:P03025) (239 aa) fasta scores: E(): 7.1e-29, 43.53% id in 232 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa1157 SWALL:Q9I4I0 (EMBL:AE004546) (236 aa) fasta scores: E(): 5.4e-43, 54.14% id in 229 aa; response regulator protein 859504 3094956 BPSS0630 Burkholderia pseudomallei K96243 response regulator protein YP_110651.1 858794 D 272560 CDS YP_110652.1 53721667 3095623 859892..861007 1 NC_006351.1 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Escherichia coli sensor protein CpxA or EcfB or Ssd or Eup SWALL:CPXA_ECOLI (SWALL:P08336) (457 aa) fasta scores: E(): 9.9e-15, 31.93% id in 238 aa, and to Pseudomonas aeruginosa probable two-component sensor pa1798 SWALL:Q9I2U4 (EMBL:AE004606) (428 aa) fasta scores: E(): 1.7e-33, 39.17% id in 291 aa. Possible alternative translational start site; sensor protein 861007 3095623 BPSS0631 Burkholderia pseudomallei K96243 sensor protein YP_110652.1 859892 D 272560 CDS YP_110653.2 229269502 3095624 complement(861344..864193) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3339 SWALL:Q9HYQ6 (EMBL:AE004756) (728 aa) fasta scores: E(): 6.6e-53, 34.01% id in 729 aa, and to Vibrio cholerae hypothetical protein vc0603 SWALL:Q9KUB9 (EMBL:AE004145) (764 aa) fasta scores: E(): 7.6e-43, 32.18% id in 755 aa. Possible alternative translational start site; patatin-like phospholipase 864193 3095624 BPSS0632 Burkholderia pseudomallei K96243 patatin-like phospholipase YP_110653.2 861344 R 272560 CDS YP_110654.1 53721669 3095136 864490..865554 1 NC_006351.1 Similar to Escherichia coli, Salmonella typhimurium, Salmonella typhi, and Shigella flexneri rod shape-determining protein MreB SWALL:MREB_ECOLI (SWALL:P13519) (347 aa) fasta scores: E(): 3.8e-57, 51.43% id in 348 aa, and to Ralstonia solanacearum probable rod shape-determining protein rsc0059 or rs01882 SWALL:Q8Y3C1 (EMBL:AL646057) (347 aa) fasta scores: E(): 3.5e-63, 54.95% id in 333 aa. Similar to BPSL0186, 54.955% identity (54.955% ungapped) in 333 aa overlap; rod shape-determining protein MreB 865554 mreB 3095136 mreB Burkholderia pseudomallei K96243 rod shape-determining protein MreB YP_110654.1 864490 D 272560 CDS YP_110655.1 53721670 3096695 866105..866695 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1878 SWALL:Q9I2L9 (EMBL:AE004614) (192 aa) fasta scores: E(): 2e-51, 69.84% id in 189 aa, and to Agrobacterium tumefaciens hypothetical protein SWALL:Q9R6H4 (EMBL:AB016260) (222 aa) fasta scores: E(): 8.6e-14, 36.41% id in 184 aa; hypothetical protein 866695 3096695 BPSS0634 Burkholderia pseudomallei K96243 hypothetical protein YP_110655.1 866105 D 272560 CDS YP_110656.1 53721671 3096696 867006..869135 1 NC_006351.1 C-terminal region is similar to Rhizobium loti hypothetical protein mll0692 SWALL:Q98M80 (EMBL:AP002995) (660 aa) fasta scores: E(): 1.1e-110, 53.38% id in 665 aa. Full length CDS is similar to Bacillus halodurans hypothetical protein bh3691 SWALL:Q9K6N7 (EMBL:AP001519) (702 aa) fasta scores: E(): 5.2e-74, 35.78% id in 693 aa; hypothetical protein 869135 3096696 BPSS0635 Burkholderia pseudomallei K96243 hypothetical protein YP_110656.1 867006 D 272560 CDS YP_110657.1 53721672 3095865 869231..869494 1 NC_006351.1 Poor database matches. Similar to the C-terminal region of Myxococcus xanthus RNA polymerase sigma factor CarQ SWALL:CARQ_MYXXA (SWALL:Q06909) (174 aa) fasta scores: E(): 6.7, 32.91% id in 79 aa; hypothetical protein 869494 3095865 BPSS0636 Burkholderia pseudomallei K96243 hypothetical protein YP_110657.1 869231 D 272560 CDS YP_110658.1 53721673 3095505 871103..871579 1 NC_006351.1 Similar to Pseudomonas putida glyoxalase pp3444 SWALL:AAN69046 (EMBL:AE016786) (159 aa) fasta scores: E(): 3.9e-25, 51.92% id in 156 aa, and to Ralstonia solanacearum hypothetical protein rsc0107 or rs00977 SWALL:Q8Y374 (EMBL:AL646057) (159 aa) fasta scores: E(): 2e-24, 47.61% id in 147 aa; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 871579 3095505 BPSS0639 Burkholderia pseudomallei K96243 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_110658.1 871103 D 272560 CDS YP_110659.1 53721674 3096330 871888..872547 1 NC_006351.1 Similar to Zea mays glutathione S-transferase III Gst3 SWALL:GTH3_MAIZE (SWALL:P04907) (221 aa) fasta scores: E(): 2e-05, 30.18% id in 212 aa, and to Rhizobium meliloti glutathione S-transferase r02060 or smc04321 SWALL:Q92NV7 (EMBL:AL591789) (224 aa) fasta scores: E(): 1.3e-36, 48.59% id in 214 aa; glutathione S-transferase 872547 3096330 BPSS0640 Burkholderia pseudomallei K96243 glutathione S-transferase YP_110659.1 871888 D 272560 CDS YP_110660.1 53721675 3095874 872588..873298 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical protein r02087 or smc01408 SWALL:Q92NT5 (EMBL:AL591789) (236 aa) fasta scores: E(): 4.6e-66, 67.09% id in 234 aa, and to Rhizobium loti hypothetical protein mll2522 SWALL:Q98I82 (EMBL:AP002999) (273 aa) fasta scores: E(): 1.9e-20, 41.42% id in 239 aa; hypothetical protein 873298 3095874 BPSS0641 Burkholderia pseudomallei K96243 hypothetical protein YP_110660.1 872588 D 272560 CDS YP_110661.1 53721676 3095875 complement(875199..876578) 1 NC_006351.1 Similar to Escherichia coli sensor protein QseC SWALL:QSEC_ECOLI (SWALL:P40719) (449 aa) fasta scores: E(): 4.6e-27, 32.08% id in 452 aa, and to Ralstonia solanacearum probable transmembrane two-component sensor kinase transcription regulator protein rsp1553 or rs02109 SWALL:Q8XPT4 (EMBL:AL646085) (438 aa) fasta scores: E(): 9.4e-50, 41.34% id in 445 aa; sensor kinase 876578 3095875 BPSS0642 Burkholderia pseudomallei K96243 sensor kinase YP_110661.1 875199 R 272560 CDS YP_110662.1 53721677 3095245 complement(876575..877237) 1 NC_006351.1 Similar to Salmonella typhimurium transcriptional regulatory protein BasR or PmrA or ParA SWALL:BASR_SALTY (SWALL:P36556) (222 aa) fasta scores: E(): 1.2e-38, 50.46% id in 214 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc3404 or rs01713 SWALL:Q8XTZ1 (EMBL:AL646075) (221 aa) fasta scores: E(): 1.1e-43, 55% id in 220 aa. Simlar to BPSL0806, self_match.tab 935589:936422 forward MW:3 (278 aa) initn: 837 init1: 837 opt: 839 Z-score: 811.0 bits: 157.5 E(): 1.3e-39 Smith-Waterman score: 839; 59.259% identity (59.259% ungapped) in 216 aa overlap; response regulator protein 877237 3095245 BPSS0643 Burkholderia pseudomallei K96243 response regulator protein YP_110662.1 876575 R 272560 CDS YP_110663.1 53721678 3095224 877398..878258 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr5989 SWALL:Q98AI2 (EMBL:AP003008) (293 aa) fasta scores: E(): 1.2e-27, 35.12% id in 279 aa, and to Ralstonia solanacearum hypothetical protein rsc0081 or rs02255 SWALL:Q8Y399 (EMBL:AL646057) (300 aa) fasta scores: E(): 3.8e-24, 34.04% id in 282 aa; DNA-binding protein 878258 3095224 BPSS0644 Burkholderia pseudomallei K96243 DNA-binding protein YP_110663.1 877398 D 272560 CDS YP_110664.1 53721679 3095225 878644..878913 1 NC_006351.1 Weakly similar to Salmonella typhi hypothetical protein sty2195 SWALL:Q8Z5Q9 (EMBL:AL627272) (81 aa) fasta scores: E(): 0.066, 38.33% id in 60 aa, and to Escherichia coli hypothetical protein YodC SWALL:YODC_ECOLI (SWALL:P76331) (60 aa) fasta scores: E(): 0.098, 40.74% id in 54 aa; hypothetical protein 878913 3095225 BPSS0645 Burkholderia pseudomallei K96243 hypothetical protein YP_110664.1 878644 D 272560 CDS YP_110665.1 53721680 3095713 complement(879145..879471) 1 NC_006351.1 C-terminal region is similar to Bacteriophage T4 immunity protein Imm SWALL:IMM_BPT4 (SWALL:P08986) (83 aa) fasta scores: E(): 0.004, 40.35% id in 57 aa, and to Bacteriophage T2 ORF42.1 SWALL:Q38392 (EMBL:Z35073) (83 aa) fasta scores: E(): 0.0055, 36.36% id in 55 aa; hypothetical protein 879471 3095713 BPSS0646 Burkholderia pseudomallei K96243 hypothetical protein YP_110665.1 879145 R 272560 CDS YP_110666.1 53721681 3095859 complement(879561..880028) 1 NC_006351.1 Similar to Escherichia coli O157:H7 hypothetical protein Z2165 SWALL:Q8X475 (EMBL:AE005351) (131 aa) fasta scores: E(): 9.3e-29, 60.46% id in 129 aa, and to the C-terminal region of Vibrio cholerae hypothetical protein vca1053 SWALL:Q9KKP9 (EMBL:AE004431) (166 aa) fasta scores: E(): 1.8e-29, 62.69% id in 126 aa; hypothetical protein 880028 3095859 BPSS0647 Burkholderia pseudomallei K96243 hypothetical protein YP_110666.1 879561 R 272560 CDS YP_110667.1 53721682 3095860 880135..881091 1 NC_006351.1 upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism; transcriptional activator FtrA 881091 ftrA 3095860 ftrA Burkholderia pseudomallei K96243 transcriptional activator FtrA YP_110667.1 880135 D 272560 CDS YP_110668.1 53721683 3095196 881655..882119 1 NC_006351.1 Poor database matches. Weakly similar to Rhizobium etli hypothetical protein SWALL:AAM54839 (EMBL:U80928) (157 aa) fasta scores: E(): 6.4, 28.14% id in 135 aa; hypothetical protein 882119 3095196 BPSS0649 Burkholderia pseudomallei K96243 hypothetical protein YP_110668.1 881655 D 272560 CDS YP_110669.1 53721684 3095610 882183..883634 1 NC_006351.1 Similar to Xanthomonas axonopodis succinyl-diaminopimelate desuccinylase xac2952 SWALL:AAM37797 (EMBL:AE011937) (497 aa) fasta scores: E(): 6e-105, 56.72% id in 476 aa, and to Xanthomonas campestris succinyl-diaminopimelate desuccinylase xcc2782 SWALL:AAM42054 (EMBL:AE012391) (497 aa) fasta scores: E(): 7.9e-104, 56.51% id in 476 aa; peptidase 883634 3095610 BPSS0650 Burkholderia pseudomallei K96243 peptidase YP_110669.1 882183 D 272560 CDS YP_110670.1 53721685 3095611 883744..884112 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc0090 or rs02263 SWALL:Q8Y390 (EMBL:AL646057) (152 aa) fasta scores: E(): 3.1e-12, 45.94% id in 111 aa, and to Rhizobium loti hypothetical protein mlr0026 SWALL:Q98NQ9 (EMBL:AP002994) (107 aa) fasta scores: E(): 5e-08, 32.03% id in 103 aa; hypothetical protein 884112 3095611 BPSS0651 Burkholderia pseudomallei K96243 hypothetical protein YP_110670.1 883744 D 272560 CDS YP_110671.1 53721686 3095595 884644..885222 1 NC_006351.1 Similar to Rhizobium meliloti membrane protein, similar to periplasmic nitrate reductase NnuR rb1123 or smb20997 SWALL:Q92UK4 (EMBL:AL603646) (194 aa) fasta scores: E(): 1e-25, 40.31% id in 191 aa, and to Caulobacter crescentus hypothetical protein CC0706 SWALL:Q9AAA0 (EMBL:AE005745) (188 aa) fasta scores: E(): 3.6e-25, 42.48% id in 193 aa; hypothetical protein 885222 3095595 BPSS0652 Burkholderia pseudomallei K96243 hypothetical protein YP_110671.1 884644 D 272560 CDS YP_110673.2 161723219 3096867 886733..888697 1 NC_006351.1 catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase 888697 3096867 BPSS0654 Burkholderia pseudomallei K96243 x-prolyl-dipeptidyl aminopeptidase YP_110673.2 886733 D 272560 CDS YP_110674.1 53721689 3095544 888951..890615 1 NC_006351.1 Similar to Bradyrhizobium japonicum hypothetical protein bll5514 SWALL:BAC50779 (EMBL:AP005955) (520 aa) fasta scores: E(): 2e-18, 30.07% id in 562 aa, and to Caulobacter crescentus hypothetical protein CC3418 SWALL:Q9A2Y8 (EMBL:AE006002) (504 aa) fasta scores: E(): 4.7e-17, 29.55% id in 538 aa; hypothetical protein 890615 3095544 BPSS0655 Burkholderia pseudomallei K96243 hypothetical protein YP_110674.1 888951 D 272560 CDS YP_110675.1 53721690 3095562 890647..891024 1 NC_006351.1 hypothetical protein 891024 3095562 BPSS0656 Burkholderia pseudomallei K96243 hypothetical protein YP_110675.1 890647 D 272560 CDS YP_110676.1 53721691 3096281 892577..894607 1 NC_006351.1 hypothetical protein 894607 3096281 BPSS0658 Burkholderia pseudomallei K96243 hypothetical protein YP_110676.1 892577 D 272560 CDS YP_110677.1 53721692 3095532 894966..895400 1 NC_006351.1 Similar to Agrobacterium tumefaciens VirA/G regulated gene VirK SWALL:O50246 (EMBL:AF034769) (144 aa) fasta scores: E(): 1.4e-09, 29.92% id in 137 aa, and to Xanthomonas campestris VirK protein xcc0418 SWALL:Q8PDC2 (EMBL:AE012139) (143 aa) fasta scores: E(): 2.2e-10, 36.05% id in 147 aa; hypothetical protein 895400 3095532 BPSS0659 Burkholderia pseudomallei K96243 hypothetical protein YP_110677.1 894966 D 272560 CDS YP_110678.1 53721693 3096599 897761..898156 1 NC_006351.1 Similar to the C-terminal regions of Escherichia coli adhesin AIDA-I SWALL:AIDA_ECOLI (SWALL:Q03155) (1286 aa) fasta scores: E(): 0.62, 29.31% id in 116 aa, and to Pseudomonas aeruginosa probable adhesin pa4082 SWALL:Q9HWU6 (EMBL:AE004824) (1018 aa) fasta scores: E(): 0.16, 27.13% id in 129 aa. Possible gene remnant; hypothetical protein 898156 3096599 BPSS0663 Burkholderia pseudomallei K96243 hypothetical protein YP_110678.1 897761 D 272560 CDS YP_110679.1 53721694 3095402 898946..899656 1 NC_006351.1 Similar to Escherichia coli and Shigella flexneri transcriptional regulatory protein CpxR SWALL:CPXR_ECOLI (SWALL:P16244) (232 aa) fasta scores: E(): 1.3e-13, 29.53% id in 237 aa, and to Salmonella typhi two-component response regulatory protein sty3812 SWALL:Q8Z2W2 (EMBL:AL627279) (232 aa) fasta scores: E(): 9.6e-14, 29.53% id in 237 aa; response regulator protein 899656 3095402 BPSS0664 Burkholderia pseudomallei K96243 response regulator protein YP_110679.1 898946 D 272560 CDS YP_110680.1 53721695 3095541 901100..901996 1 NC_006351.1 Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 4.9e-32, 37.23% id in 282 aa, and to Pseudomonas aeruginosa hypothetical protein pa0193 SWALL:Q9I6U1 (EMBL:AE004457) (300 aa) fasta scores: E(): 2e-61, 54.54% id in 286 aa; alpha-ketoglutarate-dependent taurine dioxygenase 901996 3095541 BPSS0665 Burkholderia pseudomallei K96243 alpha-ketoglutarate-dependent taurine dioxygenase YP_110680.1 901100 D 272560 CDS YP_110681.1 53721696 3095568 complement(902357..904294) 1 NC_006351.1 Subfamily M9A unassigned peptidase. C-terminal region is similar to an internal region of Vibrio alginolyticus microbial collagenase precursor SWALL:COLA_VIBAL (SWALL:P43154) (814 aa) fasta scores: E(): 1.8e-54, 32.52% id in 578 aa, and to the C-terminal region of Vibrio parahaemolyticus microbial collagenase precursor PrtVp SWALL:COLA_VIBPA (SWALL:Q56696) (587 aa) fasta scores: E(): 9.3e-48, 33.21% id in 545 aa. Similar to BPSS0827, 81.329% identity (81.458% ungapped) in 632 aa overlap; collagenase 904294 3095568 BPSS0666 Burkholderia pseudomallei K96243 collagenase YP_110681.1 902357 R 272560 CDS YP_110682.1 53721697 3095438 905027..905245 1 NC_006351.1 Similar to Xanthomonas campestris hypothetical protein xcc1648 SWALL:AAM40942 (EMBL:AE012266) (78 aa) fasta scores: E(): 4e-05, 43.54% id in 62 aa, and to an internal region of Pseudomonas aeruginosa hypothetical protein pa3012 SWALL:Q9HZJ4 (EMBL:AE004726) (124 aa) fasta scores: E(): 6.1e-09, 61.01% id in 59 aa; hypothetical protein 905245 3095438 BPSS0668 Burkholderia pseudomallei K96243 hypothetical protein YP_110682.1 905027 D 272560 CDS YP_110683.1 53721698 3095202 complement(905454..906683) 1 NC_006351.1 Similar to Salmonella typhimurium cytoplasmic protein stm0986 SWALL:Q8ZQC1 (EMBL:AE008742) (410 aa) fasta scores: E(): 4.1e-83, 52.03% id in 394 aa, and to Escherichia coli hypothetical protein YcaQ SWALL:YCAQ_ECOLI (SWALL:P75843) (410 aa) fasta scores: E(): 1.1e-82, 51.64% id in 395 aa; hypothetical protein 906683 3095202 BPSS0669 Burkholderia pseudomallei K96243 hypothetical protein YP_110683.1 905454 R 272560 CDS YP_110684.1 53721699 3095203 complement(907100..908497) 1 NC_006351.1 Similar to Rhizobium loti multidrug efflux protein mll8348 SWALL:Q983F7 (EMBL:AP003013) (473 aa) fasta scores: E(): 1.6e-74, 46.01% id in 452 aa, and to Xanthomonas axonopodis drug resistance translocase xac2494 SWALL:AAM37345 (EMBL:AE011887) (471 aa) fasta scores: E(): 2.5e-64, 43.13% id in 459 aa; transporter protein 908497 3095203 BPSS0670 Burkholderia pseudomallei K96243 transporter protein YP_110684.1 907100 R 272560 CDS YP_110685.3 229269501 3096110 909175..910872 1 NC_006351.1 Similar to Escherichia coli periplasmic trehalase precursor TreA or OsmA SWALL:TREA_ECOLI (SWALL:P13482) (565 aa) fasta scores: E(): 7.9e-103, 55.96% id in 495 aa, and to Ralstonia solanacearum probable periplasmic alpha,alpha-trehalase signal peptide protein rsp0277 or rs03687 SWALL:Q8XT38 (EMBL:AL646077) (551 aa) fasta scores: E(): 1.1e-134, 68.56% id in 528 aa. CDS is extended at the N-terminus in comparison to orthologues and lacks an N-terminal signal sequence; the effect on the function of CDS is not known; trehalase 910872 3096110 BPSS0671 Burkholderia pseudomallei K96243 trehalase YP_110685.3 909175 D 272560 CDS YP_110686.1 53721701 3096127 911273..912085 1 NC_006351.1 Weakly similar to Pseudomonas putida formate/nitrite transporter family transporter protein PP1156 SWALL:AAN66781 (EMBL:AE016778) (298 aa) fasta scores: E(): 0.11, 22.69% id in 260 aa. Possible alternative translational start site. C-terminal region is similar to the C-terminal region of Similar to Pseudomonas putida membrane protein PP1696 SWALL:AAN67317 (EMBL:AE016780) (392 aa) fasta scores: E(): 0.91, 28.19% id in 227 aa. Possible gene remnant; hypothetical protein 912085 3096127 BPSS0672 Burkholderia pseudomallei K96243 hypothetical protein YP_110686.1 911273 D 272560 CDS YP_110687.1 53721702 3096128 912150..912743 1 NC_006351.1 Similar to the C-terminal region of Synechocystis sp. cytochrome c oxidase polypeptide III CtaE SWALL:COX3_SYNY3 (SWALL:Q06475) (233 aa) fasta scores: E(): 2.1e-12, 31.79% id in 173 aa, and to the full length Bradyrhizobium japonicum nitric oxide reductase subunit E blr3212 SWALL:BAC48477 (EMBL:AP005946) (191 aa) fasta scores: E(): 2e-21, 39.44% id in 180 aa; cytochrome c oxidase subunit III protein 912743 3096128 BPSS0673 Burkholderia pseudomallei K96243 cytochrome c oxidase subunit III protein YP_110687.1 912150 D 272560 CDS YP_110688.1 53721703 3095548 912765..913067 1 NC_006351.1 Similar to Pseudomonas fluorescens NirP protein SWALL:Q9F0X2 (EMBL:AF197466) (81 aa) fasta scores: E(): 3.9, 29.87% id in 77 aa; hypothetical protein 913067 3095548 BPSS0674 Burkholderia pseudomallei K96243 hypothetical protein YP_110688.1 912765 D 272560 CDS YP_110689.1 53721704 3095090 complement(913160..914050) 1 NC_006351.1 Similar to Burkholderia cepacia genomovar III regulatory protein SWALL:Q8VP25 (EMBL:AY028431) (302 aa) fasta scores: E(): 7.8e-78, 66% id in 303 aa. C-terminal region is similar to Pseudomonas aeruginosa transcriptional activator protein LasR SWALL:LASR_PSEAE (SWALL:P25084) (239 aa) fasta scores: E(): 4.6e-05, 25.1% id in 243 aa; GerR family regulatory protein 914050 3095090 BPSS0675 Burkholderia pseudomallei K96243 GerR family regulatory protein YP_110689.1 913160 R 272560 CDS YP_110690.1 53721705 3095091 914574..915398 1 NC_006351.1 Similar to Burkholderia cepacia genomovar III regulatory protein SWALL:Q8VP24 (EMBL:AY028431) (277 aa) fasta scores: E(): 1.3e-55, 56.27% id in 279 aa. C-terminal region is weakly similar to the C-terminal region of Pseudomonas aeruginosa transcriptional activator protein LasR SWALL:LASR_PSEAE (SWALL:P25084) (239 aa) fasta scores: E(): 6.5, 21.59% id in 213 aa; hypothetical protein 915398 3095091 BPSS0676 Burkholderia pseudomallei K96243 hypothetical protein YP_110690.1 914574 D 272560 CDS YP_110691.1 53721706 3095912 915616..917586 1 NC_006351.1 Similar to Burkholderia cepacia genomovar III asparagine synthetase SWALL:Q8VP10 (EMBL:AY028431) (656 aa) fasta scores: E(): 6e-206, 74.54% id in 656 aa. N-terminal region is similar to the N-terminal region of Bacillus subtilis asparagine synthetase [glutamine-hydrolyzing] 2 AsnH SWALL:ASNH_BACSU (SWALL:P42113) (747 aa) fasta scores: E(): 4.6e-23, 27.93% id in 605 aa; asparagine synthetase 917586 3095912 BPSS0677 Burkholderia pseudomallei K96243 asparagine synthetase YP_110691.1 915616 D 272560 CDS YP_110692.1 53721707 3095496 complement(918753..920984) 1 NC_006351.1 Similar to Brevundimonas diminuta isoquinoline 1-oxidoreductase beta subunit IorB SWALL:IORB_BREDI (SWALL:Q51698) (781 aa) fasta scores: E(): 4e-14, 34.82% id in 784 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa1880 SWALL:Q9I2L7 (EMBL:AE004614) (731 aa) fasta scores: E(): 0, 79.26% id in 738 aa; oxidoreductase subunit beta 920984 3095496 BPSS0679 Burkholderia pseudomallei K96243 oxidoreductase subunit beta YP_110692.1 918753 R 272560 CDS YP_110693.1 53721708 3095200 complement(920987..921448) 1 NC_006351.1 Similar to Brevundimonas diminuta isoquinoline 1-oxidoreductase alpha subunit IorA SWALL:IORA_BREDI (SWALL:Q51697) (152 aa) fasta scores: E(): 5e-32, 58.62% id in 145 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa1881 SWALL:Q9I2L6 (EMBL:AE004614) (153 aa) fasta scores: E(): 1e-50, 84.96% id in 153 aa; oxidoreductase subunit alpha 921448 3095200 BPSS0680 Burkholderia pseudomallei K96243 oxidoreductase subunit alpha YP_110693.1 920987 R 272560 CDS YP_110694.1 53721709 3095215 921649..922632 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2047 SWALL:Q9I268 (EMBL:AE004631) (329 aa) fasta scores: E(): 1.8e-49, 47.72% id in 329 aa, and weakly similar to Pseudomonas aeruginosa regulatory protein AraC family activator of pyochelin and ferripyochelin receptor synthesis PchR SWALL:PCHR_PSEAE (SWALL:P40883) (296 aa) fasta scores: E(): 7.7e-06, 24.25% id in 301 aa; AraC family transcriptional regulator 922632 3095215 BPSS0681 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110694.1 921649 D 272560 CDS YP_110695.1 53721710 3095216 922851..923249 1 NC_006351.1 Similar to Vibrio vulnificus conserved hypothetical protein vv12197 SWALL:AAO10581 (EMBL:AE016804) (129 aa) fasta scores: E(): 5.3e-16, 46.15% id in 117 aa, and to Streptomyces coelicolor hypothetical protein SCO4364 or SCD19.19 SWALL:Q9F2Y3 (EMBL:AL939119) (125 aa) fasta scores: E(): 1.5e-09, 38.33% id in 120 aa. Possible alternative translational start sites; hypothetical protein 923249 3095216 BPSS0682 Burkholderia pseudomallei K96243 hypothetical protein YP_110695.1 922851 D 272560 CDS YP_110696.1 53721711 3095466 complement(923681..924037) 1 NC_006351.1 hypothetical protein 924037 3095466 BPSS0683 Burkholderia pseudomallei K96243 hypothetical protein YP_110696.1 923681 R 272560 CDS YP_110697.1 53721712 3095807 924442..925680 1 NC_006351.1 Similar to Rhodococcus sp. dibenzothiophene desulfurization enzyme C SoxC or DszC SWALL:SOXC_RHOSO (SWALL:P54998) (417 aa) fasta scores: E(): 1.3e-15, 36.09% id in 399 aa, and to Pseudomonas aeruginosa hypothetical protein pa2325 SWALL:Q9I1F3 (EMBL:AE004658) (411 aa) fasta scores: E(): 7.3e-93, 59.46% id in 412 aa. Similar to BPSS0685, 55.721% identity (56.566% ungapped) in 402 aa overlap; hypothetical protein 925680 3095807 BPSS0684 Burkholderia pseudomallei K96243 hypothetical protein YP_110697.1 924442 D 272560 CDS YP_110698.1 53721713 3095808 925685..926899 1 NC_006351.1 Similar to Rhodococcus sp. dibenzothiophene desulfurization enzyme C SoxcC or DszC SWALL:SOXC_RHOSO (SWALL:P54998) (417 aa) fasta scores: E(): 7.9e-13, 30.65% id in 411 aa, and to Pseudomonas aeruginosa hypothetical protein pa2347 SWALL:Q9I1D1 (EMBL:AE004661) (405 aa) fasta scores: E(): 6e-88, 60.3% id in 393 aa. Similar to BPSS0684, 55.721% identity (56.566% ungapped) in 402 aa overlap; hypothetical protein 926899 3095808 BPSS0685 Burkholderia pseudomallei K96243 hypothetical protein YP_110698.1 925685 D 272560 CDS YP_110699.1 53721714 3095474 926987..928390 1 NC_006351.1 Similar to Rhodococcus sp. dibenzothiophene desulfurization enzyme A SoxA or DszA SWALL:SOXA_RHOSO (SWALL:P54995) (453 aa) fasta scores: E(): 2e-52, 38.03% id in 447 aa, and to Pseudomonas aeruginosa hypothetical protein pa2326 SWALL:Q9I1F2 (EMBL:AE004658) (469 aa) fasta scores: E(): 2.3e-134, 71.23% id in 452 aa. Similar to BPSS0314, 57.802% identity (58.444% ungapped) in 455 aa overlap; hypothetical protein 928390 3095474 BPSS0686 Burkholderia pseudomallei K96243 hypothetical protein YP_110699.1 926987 D 272560 CDS YP_110700.1 53721715 3095366 928387..928590 1 NC_006351.1 hypothetical protein 928590 3095366 BPSS0686a Burkholderia pseudomallei K96243 hypothetical protein YP_110700.1 928387 D 272560 CDS YP_110701.1 53721716 3095367 complement(928660..929988) 1 NC_006351.1 Similar to Escherichia coli sensor protein RstB or UspT SWALL:RSTB_ECOLI (SWALL:P18392) (433 aa) fasta scores: E(): 3.3e-37, 33.63% id in 437 aa, and to Ralstonia solanacearum probable transmembrane sensor histidine kinase transcription regulator protein rsc3063 or rs00507 SWALL:Q8XUX0 (EMBL:AL646073) (433 aa) fasta scores: E(): 1.9e-84, 55.88% id in 433 aa; sensor kinase 929988 3095367 BPSS0687 Burkholderia pseudomallei K96243 sensor kinase YP_110701.1 928660 R 272560 CDS YP_110702.1 53721717 3095461 complement(929989..930711) 1 NC_006351.1 Similar to Escherichia coli transcriptional regulatory protein RstA or UrpT SWALL:RSTA_ECOLI (SWALL:P52108) (242 aa) fasta scores: E(): 1.3e-32, 42.61% id in 237 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc3064 or rs00508 SWALL:Q8XUW9 (EMBL:AL646073) (243 aa) fasta scores: E(): 5.1e-78, 83.12% id in 243 aa; response regulator protein 930711 3095461 BPSS0688 Burkholderia pseudomallei K96243 response regulator protein YP_110702.1 929989 R 272560 CDS YP_110703.1 53721718 3095483 930919..931698 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc3065 or rs06074 SWALL:Q8XUW8 (EMBL:AL646073) (261 aa) fasta scores: E(): 3.4e-40, 43.77% id in 249 aa. Weakly similar to Escherichia coli, and Shigella flexneri MltA-interacting protein precursor MipA SWALL:MIPA_ECOLI (SWALL:P77486) (248 aa) fasta scores: E(): 0.073, 23.67% id in 245 aa; hypothetical protein 931698 3095483 BPSS0689 Burkholderia pseudomallei K96243 hypothetical protein YP_110703.1 930919 D 272560 CDS YP_110704.1 53721719 3095484 931722..932909 1 NC_006351.1 Similar to Ralstonia solanacearum signal peptide protein rsc1462 or rs03845 SWALL:Q8XZD9 (EMBL:AL646064) (367 aa) fasta scores: E(): 3.8e-41, 37.97% id in 366 aa, and to Yersinia pestis hypothetical protein ypo1559 or y2608 SWALL:Q8ZFW6 (EMBL:AJ414149) (379 aa) fasta scores: E(): 1.3e-32, 34.97% id in 366 aa. Possible alternative translational start site; hypothetical protein 932909 3095484 BPSS0690 Burkholderia pseudomallei K96243 hypothetical protein YP_110704.1 931722 D 272560 CDS YP_110705.1 53721720 3096645 complement(932953..933390) 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri homoprotocatechuate degradative operon repressor HpcR or HpaR SWALL:HPCR_ECOLI (SWALL:Q07095) (148 aa) fasta scores: E(): 6.2e-20, 46.04% id in 139 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc1592 or rs03954 SWALL:Q8XZ14 (EMBL:AL646065) (154 aa) fasta scores: E(): 5.6e-21, 47.18% id in 142 aa; MarR family transcriptional regulator 933390 3096645 BPSS0691 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_110705.1 932953 R 272560 CDS YP_110706.1 53721721 3095248 933556..934245 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4121 SWALL:Q9HWR0 (EMBL:AE004828) (219 aa) fasta scores: E(): 6.1e-30, 42.92% id in 212 aa, and to the N-terminal region of Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase] HpaG SWALL:HPAG_ECOLI (SWALL:Q46978) (429 aa) fasta scores: E(): 1.6e-21, 33.97% id in 209 aa; fumarylacetoacetate (FAA) hydrolase 934245 3095248 BPSS0692 Burkholderia pseudomallei K96243 fumarylacetoacetate (FAA) hydrolase YP_110706.1 933556 D 272560 CDS YP_110707.1 53721722 3095249 934242..935006 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4122 SWALL:Q9HWQ9 (EMBL:AE004828) (259 aa) fasta scores: E(): 4.6e-59, 59.68% id in 253 aa, and to the C-terminal region of Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase] HpaG SWALL:HPAG_ECOLI (SWALL:Q46978) (429 aa) fasta scores: E(): 4.9e-47, 58.29% id in 223 aa; fumarylacetoacetate (FAA) hydrolase 935006 3095249 BPSS0693 Burkholderia pseudomallei K96243 fumarylacetoacetate (FAA) hydrolase YP_110707.1 934242 D 272560 CDS YP_110708.1 53721723 3094885 935031..936494 1 NC_006351.1 Similar to Escherichia coli 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase HpcC SWALL:HPCC_ECOLI (SWALL:P42269) (468 aa) fasta scores: E(): 2.7e-138, 75.05% id in 461 aa, and to Pseudomonas aeruginosa 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase pa4123 SWALL:Q9HWQ8 (EMBL:AE004828) (486 aa) fasta scores: E(): 3.2e-161, 81.85% id in 485 aa; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 936494 hpcC 3094885 hpcC Burkholderia pseudomallei K96243 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_110708.1 935031 D 272560 CDS YP_110709.1 53721724 3094970 936566..937414 1 NC_006351.1 Similar to Escherichia coli 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpcB SWALL:HPCB_ECOLI (SWALL:Q05353) (275 aa) fasta scores: E(): 7e-71, 64.09% id in 259 aa, and to Salmonella typhi 3,4-dihydroxyphenylacetate 2,3-dioxygenase sty1137 SWALL:Q8Z7Q1 (EMBL:AL627269) (283 aa) fasta scores: E(): 6.1e-81, 66.31% id in 282 aa; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 937414 hpcB 3094970 hpcB Burkholderia pseudomallei K96243 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_110709.1 936566 D 272560 CDS YP_110710.1 53721725 3094886 937472..937864 1 NC_006351.1 Similar to Escherichia coli 5-carboxymethyl-2-hydroxymuconate delta-isomerase HpcD SWALL:HPCD_ECOLI (SWALL:Q05354) (125 aa) fasta scores: E(): 2e-18, 48.41% id in 126 aa, and to Ralstonia solanacearum 5-carboxymethyl-2-hydroxymuconate delta-isomerase rsc2419 or rs02694 SWALL:Q8XWQ4 (EMBL:AL646070) (134 aa) fasta scores: E(): 2.6e-24, 50.79% id in 126 aa; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 937864 hpcD 3094886 hpcD Burkholderia pseudomallei K96243 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_110710.1 937472 D 272560 CDS YP_110711.1 53721726 3094887 937887..938690 1 NC_006351.1 Similar to Escherichia coli 2-oxo-hepta-3-ene-1,7-dioic acid hydratase HpcG SWALL:HPCG_ECOLI (SWALL:P42270) (264 aa) fasta scores: E(): 3.3e-74, 70.3% id in 266 aa, and to Salmonella typhimurium, and Salmonella typhi 4-hydroxyphenylacetate catabolism stm1105 or sty1139 SWALL:Q8XGD0 (EMBL:AE008748) (267 aa) fasta scores: E(): 1.4e-80, 74.06% id in 266 aa; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 938690 hpcG 3094887 hpcG Burkholderia pseudomallei K96243 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_110711.1 937887 D 272560 CDS YP_110712.1 53721727 3094884 938700..939506 1 NC_006351.1 Similar to Escherichia coli 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpcH or HpaI SWALL:HPAI_ECOLI (SWALL:Q47098) (262 aa) fasta scores: E(): 9.1e-58, 67.3% id in 260 aa, and to Ralstonia solanacearum 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase oxidoreductase rsc1591 or rs03953 SWALL:Q8XZ15 (EMBL:AL646065) (272 aa) fasta scores: E(): 4.4e-61, 69.61% id in 260 aa; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 939506 hpcH 3094884 hpcH Burkholderia pseudomallei K96243 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_110712.1 938700 D 272560 CDS YP_110713.1 53721728 3095824 complement(939500..940342) 1 NC_006351.1 Similar to Xanthomonas axonopodis transcriptional regulator xac1442 SWALL:AAM36313 (EMBL:AE011776) (271 aa) fasta scores: E(): 2e-34, 42.08% id in 259 aa, and to Xanthomonas campestris transcriptional regulator xcc1396 SWALL:AAM40694 (EMBL:AE012239) (287 aa) fasta scores: E(): 9.1e-34, 40.97% id in 266 aa; AraC family transcriptional regulator 940342 3095824 BPSS0699 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110713.1 939500 R 272560 CDS YP_110714.1 53721729 3095287 940619..941584 1 NC_006351.1 Similar to Dictyostelium discoideum hypothetical protein SWALL:Q8T1W9 (EMBL:AC116032) (321 aa) fasta scores: E(): 5.4e-30, 35.82% id in 321 aa, and to Streptomyces coelicolor oxidoreductase SCO1199 or SCG11A.30c SWALL:Q9RJX1 (EMBL:AL939108) (326 aa) fasta scores: E(): 6.6e-15, 33.86% id in 313 aa; zinc-binding dehydrogenase 941584 3095287 BPSS0700 Burkholderia pseudomallei K96243 zinc-binding dehydrogenase YP_110714.1 940619 D 272560 CDS YP_110715.1 53721730 3095288 complement(941677..942768) 1 NC_006351.1 Similar to Comamonas acidovorans outer membrane porin protein 32 precursor Omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 1.7e-21, 32.97% id in 373 aa, and to Ralstonia solanacearum transmembrane outer membrane porin signal peptide protein rsc1737 or rs02925 SWALL:Q8XYM1 (EMBL:AL646066) (353 aa) fasta scores: E(): 8e-92, 67.42% id in 350 aa; outer membrane porin protein 942768 3095288 BPSS0701 Burkholderia pseudomallei K96243 outer membrane porin protein YP_110715.1 941677 R 272560 CDS YP_110716.1 53721731 3097207 complement(943253..944320) 1 NC_006351.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2939 or rs00150 SWALL:Q8XV92 (EMBL:AL646072) (358 aa) fasta scores: E(): 9.6e-77, 63.86% id in 357 aa, and to Yersinia pestis probable ABC-transporter ATP-binding protein ypo3048 SWALL:Q8ZCE3 (EMBL:AJ414155) (356 aa) fasta scores: E(): 1.7e-75, 62.64% id in 356 aa; ATP-binding ABC transporter protein 944320 3097207 BPSS0702 Burkholderia pseudomallei K96243 ATP-binding ABC transporter protein YP_110716.1 943253 R 272560 CDS YP_110717.1 53721732 3095475 complement(944313..946082) 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane ABC transporter protein rsc2938 or rs00151 SWALL:Q8XV93 (EMBL:AL646072) (603 aa) fasta scores: E(): 7.4e-105, 63.13% id in 594 aa. Weakly similar to the C-terminal region of Actinobacillus pleuropneumoniae ferric transport system permease AfuB SWALL:AFUB_ACTPL (SWALL:Q44123) (687 aa) fasta scores: E(): 1.6e-22, 24.28% id in 556 aa; transmembrane ABC transporter protein 946082 3095475 BPSS0703 Burkholderia pseudomallei K96243 transmembrane ABC transporter protein YP_110717.1 944313 R 272560 CDS YP_110718.1 53721733 3095476 complement(946182..947270) 1 NC_006351.1 Similar to Ralstonia solanacearum periplasmic iron-binding signal peptide protein rsc2937 or rs00344 SWALL:Q8XV94 (EMBL:AL646072) (365 aa) fasta scores: E(): 1.3e-76, 57.1% id in 366 aa, and to Yersinia pestis exported protein ypo3050 SWALL:Q8ZCE1 (EMBL:AJ414155) (362 aa) fasta scores: E(): 2.3e-69, 54.41% id in 340 aa; periplasmic solute-binding protein 947270 3095476 BPSS0704 Burkholderia pseudomallei K96243 periplasmic solute-binding protein YP_110718.1 946182 R 272560 CDS YP_110719.1 53721734 3095674 947399..948070 1 NC_006351.1 Similar to Escherichia coli transcriptional regulatory protein QseB SWALL:QSEB_ECOLI (SWALL:P52076) (219 aa) fasta scores: E(): 4.3e-28, 42.2% id in 218 aa, and to Ralstonia solanacearum probable two-component response regulator transcription regulator protein rsc1736 or rs02924 SWALL:Q8XYM2 (EMBL:AL646066) (230 aa) fasta scores: E(): 4.2e-59, 72.97% id in 222 aa. Similar to BPSL0775, 55.263% identity (55.507% ungapped) in 228 aa overlap; response regulator protein 948070 3095674 BPSS0705 Burkholderia pseudomallei K96243 response regulator protein YP_110719.1 947399 D 272560 CDS YP_110720.1 53721735 3095880 948067..949566 1 NC_006351.1 Similar to Escherichia coli sensor protein QseC SWALL:QSEC_ECOLI (SWALL:P40719) (449 aa) fasta scores: E(): 1.5e-29, 33.11% id in 468 aa, and to Ralstonia solanacearum probable two-component transmembrane sensor kinase transcription regulator protein rsc1735 or rs02923 SWALL:Q8XYM3 (EMBL:AL646066) (471 aa) fasta scores: E(): 2.4e-87, 59.64% id in 456 aa. CDS is extended at the C-terminus in comparison to orthologues; sensor kinase 949566 3095880 BPSS0706 Burkholderia pseudomallei K96243 sensor kinase YP_110720.1 948067 D 272560 CDS YP_110721.1 53721736 3095881 complement(950344..951213) 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein atu1042 or AGR_C_1923 SWALL:Q8UGJ5 (EMBL:AE009068) (285 aa) fasta scores: E(): 1e-22, 35.61% id in 278 aa, and to Pseudomonas aeruginosa hypothetical protein pa3022 SWALL:Q9HZI4 (EMBL:AE004727) (268 aa) fasta scores: E(): 1.7e-20, 40.07% id in 282 aa; hypothetical protein 951213 3095881 BPSS0707 Burkholderia pseudomallei K96243 hypothetical protein YP_110721.1 950344 R 272560 CDS YP_110722.1 53721737 3095521 953131..954333 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 9.1e-19, 30% id in 380 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 2.9e-36, 37.28% id in 413 aa; porin protein 954333 3095521 BPSS0708 Burkholderia pseudomallei K96243 porin protein YP_110722.1 953131 D 272560 CDS YP_110723.1 53721738 3096463 954456..955919 1 NC_006351.1 Similar to Thermoanaerobacter tengcongensis transposase tte0846 SWALL:Q8RBH2 (EMBL:AE013051) (492 aa) fasta scores: E(): 4.4e-74, 43.54% id in 457 aa, and to Pseudomonas sp. transposase tnpA SWALL:Q936Y1 (EMBL:U66917) (456 aa) fasta scores: E(): 1.7e-32, 30.94% id in 475 aa; transposase 955919 3096463 BPSS0709 Burkholderia pseudomallei K96243 transposase YP_110723.1 954456 D 272560 CDS YP_110724.1 53721739 3096464 957425..958210 1 NC_006351.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 958210 3096464 BPSS0710 Burkholderia pseudomallei K96243 enoyl-CoA hydratase YP_110724.1 957425 D 272560 CDS YP_110725.1 53721740 3096582 complement(958508..959632) 1 NC_006351.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 959632 alr 3096582 alr Burkholderia pseudomallei K96243 alanine racemase YP_110725.1 958508 R 272560 CDS YP_110726.1 53721741 3096081 960161..960541 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical protein rb0957 or smb21379 SWALL:Q92UX8 (EMBL:AL603645) (124 aa) fasta scores: E(): 6.7e-31, 68.33% id in 120 aa, and to Mycobacterium tuberculosis hypothetical protein rv0140 or mt0148 SWALL:P96817 (EMBL:Z92770) (126 aa) fasta scores: E(): 4.7e-18, 50.4% id in 125 aa; hypothetical protein 960541 3096081 BPSS0712 Burkholderia pseudomallei K96243 hypothetical protein YP_110726.1 960161 D 272560 CDS YP_110727.1 53721742 3095416 960706..961941 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1789 or rs04188 SWALL:Q8XYG9 (EMBL:AL646066) (434 aa) fasta scores: E(): 1.2e-65, 56.35% id in 417 aa, and to Xanthomonas campestris hypothetical protein xcc0167 SWALL:AAM39486 (EMBL:AE012112) (427 aa) fasta scores: E(): 9e-57, 52.26% id in 419 aa; hypothetical protein 961941 3095416 BPSS0713 Burkholderia pseudomallei K96243 hypothetical protein YP_110727.1 960706 D 272560 CDS YP_110728.1 53721743 3095417 961946..962920 1 NC_006351.1 Similar to Synechocystis sp. hypothetical protein slr0865 SWALL:P73759 (EMBL:D90909) (337 aa) fasta scores: E(): 2.7e-41, 43.83% id in 308 aa, and to Mycobacterium tuberculosis hypothetical protein rv3701c or mt3804 SWALL:O69669 (EMBL:AL022121) (321 aa) fasta scores: E(): 8.3e-40, 42.4% id in 316 aa; hypothetical protein 962920 3095417 BPSS0714 Burkholderia pseudomallei K96243 hypothetical protein YP_110728.1 961946 D 272560 CDS YP_110729.1 53721744 3096038 complement(963139..963672) 1 NC_006351.1 hypothetical protein 963672 3096038 BPSS0715 Burkholderia pseudomallei K96243 hypothetical protein YP_110729.1 963139 R 272560 CDS YP_110730.1 53721745 3095280 complement(963917..964753) 1 NC_006351.1 Weakly similar to Bacillus stearothermophilus carboxylesterase precursor Est SWALL:EST_BACST (SWALL:Q06174) (247 aa) fasta scores: E(): 0.00011, 23.9% id in 251 aa, and to Thermotoga maritima esterase tm1022 SWALL:O50547 (EMBL:AJ001694) (253 aa) fasta scores: E(): 5.5e-07, 26% id in 250 aa; hypothetical protein 964753 3095280 BPSS0716 Burkholderia pseudomallei K96243 hypothetical protein YP_110730.1 963917 R 272560 CDS YP_110731.1 53721746 3095281 complement(964746..966038) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0982 or rs04310 SWALL:Q8Y0R1 (EMBL:AL646062) (429 aa) fasta scores: E(): 1.4e-83, 53.42% id in 423 aa, and to Rhizobium meliloti two-component sensor histidine kinase rb1162 or smb20868 SWALL:Q92UG9 (EMBL:AL603646) (1229 aa) fasta scores: E(): 1e-09, 26.43% id in 435 aa; hypothetical protein 966038 3095281 BPSS0717 Burkholderia pseudomallei K96243 hypothetical protein YP_110731.1 964746 R 272560 CDS YP_110732.1 53721747 3096272 967024..967668 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2196 SWALL:Q9I1S1 (EMBL:AE004646) (194 aa) fasta scores: E(): 1.6e-32, 51.59% id in 188 aa, and to Yersinia pestis TetR-family transcriptional regulatory protein ypo2378 SWALL:Q8ZE12 (EMBL:AJ414152) (199 aa) fasta scores: E(): 8.7e-28, 45.26% id in 190 aa; TetR family transcriptional regulator 967668 3096272 BPSS0718 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_110732.1 967024 D 272560 CDS YP_110733.1 53721748 3095395 968213..968893 1 NC_006351.1 Similar to Streptomyces griseus subsp. griseus NonF protein SWALL:Q9XDF2 (EMBL:AF074603) (234 aa) fasta scores: E(): 4.9e-28, 42.98% id in 228 aa, and to Xanthomonas campestris NonF-related protein xcc3360 SWALL:AAM42630 (EMBL:AE012455) (226 aa) fasta scores: E(): 4.1e-56, 65.47% id in 223 aa; peptidase 968893 3095395 BPSS0719 Burkholderia pseudomallei K96243 peptidase YP_110733.1 968213 D 272560 CDS YP_110734.1 53721749 3095396 969183..970280 1 NC_006351.1 Similar to Pseudomonas putida xenobiotic reductase A XenA SWALL:Q9R9V9 (EMBL:AF154061) (363 aa) fasta scores: E(): 1.9e-111, 76.3% id in 363 aa, and to Xanthomonas campestris xenobiotic flavin oxidoreductase a xcc1170 SWALL:AAM40468 (EMBL:AE012216) (366 aa) fasta scores: E(): 3.5e-106, 73.75% id in 362 aa; NADH:flavin oxidoreductase / NADH oxidase 970280 3095396 BPSS0720 Burkholderia pseudomallei K96243 NADH:flavin oxidoreductase / NADH oxidase YP_110734.1 969183 D 272560 CDS YP_110735.1 53721750 3096283 971275..972036 1 NC_006351.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 972036 3096283 BPSS0721 Burkholderia pseudomallei K96243 enoyl-ACP reductase YP_110735.1 971275 D 272560 CDS YP_110736.1 53721751 3095454 972923..973993 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical protein ra0234 or sma0447 SWALL:Q930G3 (EMBL:AE007216) (373 aa) fasta scores: E(): 1.4e-28, 34.64% id in 355 aa. Weakly similar to Rhizobium loti hypothetical protein mlr8361 SWALL:Q983E6 (EMBL:AP003013) (411 aa) fasta scores: E(): 5.8e-29, 29.72% id in 360 aa; hypothetical protein 973993 3095454 BPSS0723 Burkholderia pseudomallei K96243 hypothetical protein YP_110736.1 972923 D 272560 CDS YP_110737.1 53721752 3096482 974124..974519 1 NC_006351.1 Weakly similar to Pseudomonas aeruginosa osmotically inducible lipoprotein OsmE SWALL:Q9HUT7 (EMBL:AE004901) (114 aa) fasta scores: E(): 0.0005, 28.57% id in 105 aa; hypothetical protein 974519 3096482 BPSS0724 Burkholderia pseudomallei K96243 hypothetical protein YP_110737.1 974124 D 272560 CDS YP_110738.1 53721753 3095421 complement(974797..975591) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1344 SWALL:Q9I400 (EMBL:AE004564) (264 aa) fasta scores: E(): 1.4e-60, 66.28% id in 264 aa, and to Ralstonia solanacearum probable oxidoreductase rsc3138 or rs00465 SWALL:Q8XUP8 (EMBL:AL646073) (262 aa) fasta scores: E(): 9.4e-50, 58.17% id in 263 aa; short-chain dehydrogenase 975591 3095421 BPSS0725 Burkholderia pseudomallei K96243 short-chain dehydrogenase YP_110738.1 974797 R 272560 CDS YP_110739.1 53721754 3095422 complement(975934..977442) 1 NC_006351.1 Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 8.8e-57, 39.91% id in 491 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc3119 or rs00574 SWALL:Q8XUR6 (EMBL:AL646073) (488 aa) fasta scores: E(): 1.6e-129, 71.83% id in 490 aa; GntR family transcriptional regulator 977442 3095422 BPSS0726 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_110739.1 975934 R 272560 CDS YP_110740.1 53721755 3096524 977546..978265 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc3120 or rs00575 SWALL:Q8XUR5 (EMBL:AL646073) (227 aa) fasta scores: E(): 2.8e-66, 77.23% id in 224 aa, and to Streptomyces coelicolor hypothetical protein SCO1361 or SC10A9.03 SWALL:Q9AKA1 (EMBL:AL939108) (228 aa) fasta scores: E(): 2.7e-37, 48.67% id in 226 aa; hypothetical protein 978265 3096524 BPSS0727 Burkholderia pseudomallei K96243 hypothetical protein YP_110740.1 977546 D 272560 CDS YP_110741.1 53721756 3095440 complement(979524..980234) 1 NC_006351.1 C-terminal region is similar to Pseudomonas aeruginosa cyclic AMP receptor-like protein Vfr SWALL:VFR_PSEAE (SWALL:P55222) (214 aa) fasta scores: E(): 3.6e-05, 26.53% id in 196 aa. Full length CDS is similar to Ralstonia solanacearum transcription regulator protein rsp0805 or rs01902 SWALL:Q8XRM6 (EMBL:AL646081) (239 aa) fasta scores: E(): 3.4e-15, 31.19% id in 234 aa; regulatory protein 980234 3095440 BPSS0730 Burkholderia pseudomallei K96243 regulatory protein YP_110741.1 979524 R 272560 CDS YP_110742.1 53721757 3095220 980533..982194 1 NC_006351.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 982194 3095220 BPSS0731 Burkholderia pseudomallei K96243 acyl-CoA synthetase YP_110742.1 980533 D 272560 CDS YP_110743.1 53721758 3095187 982533..983231 1 NC_006351.1 Poor database matches. C-terminal region is weakly similar to Pseudomonas aeruginosa hypothetical protein pa0981 SWALL:Q9I4Y8 (EMBL:AE004531) (207 aa) fasta scores: E(): 7.3e-12, 32.63% id in 190 aa; hypothetical protein 983231 3095187 BPSS0732 Burkholderia pseudomallei K96243 hypothetical protein YP_110743.1 982533 D 272560 CDS YP_110744.1 53721759 3095188 complement(983344..985440) 1 NC_006351.1 C-terminus is similar to the C-terminal region of Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or CheM SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 3.5e-40, 55.23% id in 277 aa. Full length CDS is similar to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc3136 or rs00467 SWALL:Q8XUQ0 (EMBL:AL646073) (661 aa) fasta scores: E(): 7.2e-44, 46.76% id in 680 aa; methyl-accepting chemotaxis protein 985440 3095188 BPSS0733 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_110744.1 983344 R 272560 CDS YP_110745.1 53721760 3097257 complement(985782..987641) 1 NC_006351.1 Similar to Pseudomonas aeruginosa outer membrane protein OprM or OprK SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 5.5e-60, 50.92% id in 487 aa, and to Xanthomonas campestris outer membrane protein xcc2681 SWALL:AAM41953 (EMBL:AE012380) (497 aa) fasta scores: E(): 7e-62, 51.91% id in 495 aa. CDS is extended at the C-terminus in comparison to orthologues. Probable gene fusion resulting from the loss of a stop codon. The effect on the function of CDS is not known; outer membrane efflux protein 987641 oprM 3097257 oprM Burkholderia pseudomallei K96243 outer membrane efflux protein YP_110745.1 985782 R 272560 CDS YP_110746.1 53721761 3096068 complement(987699..989666) 1 NC_006351.1 Similar to an internal region of Acetobacter xylinus cellulose synthase 1 [includes: cellulose synthase catalytic domain [UDP-forming]; cyclic di-GMP binding domain (cellulose synthase 1 regulatory domain)] AcsA or AcsB SWALL:ACS1_ACEXY (SWALL:P21877) (1550 aa) fasta scores: E(): 2.4e-44, 31.8% id in 632 aa. Full length CDS is similar to Agrobacterium tumefaciens beta 1,3 glucan synthase catalytic subunit ATU3056 or AGR_L_3500 SWALL:Q8UBG0 (EMBL:AE009236) (654 aa) fasta scores: E(): 3.7e-107, 44.34% id in 654 aa; glycosyl transferase 989666 3096068 BPSS0735 Burkholderia pseudomallei K96243 glycosyl transferase YP_110746.1 987699 R 272560 CDS YP_110747.1 53721762 3095472 complement(989669..990994) 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein ATU3055 or AGR_L_3502 SWALL:Q8UBG1 (EMBL:AE009236) (437 aa) fasta scores: E(): 2.3e-66, 45.56% id in 406 aa; hypothetical protein 990994 3095472 BPSS0736 Burkholderia pseudomallei K96243 hypothetical protein YP_110747.1 989669 R 272560 CDS YP_110748.1 53721763 3095473 complement(991009..992559) 1 NC_006351.1 C-terminus is weakly similar to the C-terminal region of Agrobacterium tumefaciens hypothetical protein ATU3057 or AGR_L_3498 SWALL:Q8UBF9 (EMBL:AE009236) (526 aa) fasta scores: E(): 1.2e-13, 25.35% id in 489 aa. Internal region is similar to Rhizobium meliloti hypothetical protein rb0376 or smb20390 SWALL:Q92WG3 (EMBL:AL603643) (410 aa) fasta scores: E(): 6.6e-10, 24.81% id in 403 aa; hypothetical protein 992559 3095473 BPSS0737 Burkholderia pseudomallei K96243 hypothetical protein YP_110748.1 991009 R 272560 CDS YP_110749.1 53721764 3097226 993595..993924 1 NC_006351.1 DNA-binding protein 993924 3097226 BPSS0738 Burkholderia pseudomallei K96243 DNA-binding protein YP_110749.1 993595 D 272560 CDS YP_110750.1 53721765 3097072 complement(994109..994471) 1 NC_006351.1 Weakly similar to Chromobacterium violaceum hypothetical protein SWALL:Q7NTA3 (EMBL:AE016921) (135 aa) fasta scores: E(): 0.08, 36.44% id in 118 aa; hypothetical protein 994471 3097072 BPSS0738A Burkholderia pseudomallei K96243 hypothetical protein YP_110750.1 994109 R 272560 CDS YP_110751.1 53721766 3097073 complement(994808..995302) 1 NC_006351.1 Similar to the C-terminal region of Alcaligenes sp 2,4'-dihydroxyacetophenone dioxygenase (fragment) Dad SWALL:Q9REI7 (EMBL:AJ133820) (176 aa) fasta scores: E(): 5.3e-08, 32.23% id in 152 aa; hypothetical protein 995302 3097073 BPSS0739 Burkholderia pseudomallei K96243 hypothetical protein YP_110751.1 994808 R 272560 CDS YP_110752.1 53721767 3095143 complement(995453..996238) 1 NC_006351.1 hypothetical protein 996238 3095143 BPSS0740 Burkholderia pseudomallei K96243 hypothetical protein YP_110752.1 995453 R 272560 CDS YP_110753.1 53721768 3095124 complement(997157..998107) 1 NC_006351.1 Similar to Pseudomonas sp. SDS degradation transcriptional activation protein SdsB SWALL:SDSB_PSES9 (SWALL:P52686) (306 aa) fasta scores: E(): 7e-09, 27.11% id in 295 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0133 SWALL:Q9I6Z9 (EMBL:AE004451) (305 aa) fasta scores: E(): 4.4e-44, 39.6% id in 303 aa; LysR family transcriptional regulator 998107 3095124 BPSS0741 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110753.1 997157 R 272560 CDS YP_110754.1 53721769 3095125 998211..999566 1 NC_006351.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 999566 3095125 BPSS0742 Burkholderia pseudomallei K96243 beta alanine--pyruvate transaminase YP_110754.1 998211 D 272560 CDS YP_110755.1 53721770 3096016 999777..1001294 1 NC_006351.1 Similar to Pseudomonas aeruginosa methylmalonate-semialdehyde dehydrogenase [acylating] MmsA SWALL:MMSA_PSEAE (SWALL:P28810) (496 aa) fasta scores: E(): 2.9e-89, 47.56% id in 492 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa0130 SWALL:Q9I702 (EMBL:AE004451) (497 aa) fasta scores: E(): 3.6e-129, 66.53% id in 493 aa. Similar to BPSL3420, 57.730% identity (58.300% ungapped) in 511 aa overlap; methylmalonate-semialdehyde dehydrogenase 1001294 3096016 BPSS0743 Burkholderia pseudomallei K96243 methylmalonate-semialdehyde dehydrogenase YP_110755.1 999777 D 272560 CDS YP_110756.1 53721771 3097147 complement(1001970..1002458) 1 NC_006351.1 hypothetical protein 1002458 3097147 BPSS0745 Burkholderia pseudomallei K96243 hypothetical protein YP_110756.1 1001970 R 272560 CDS YP_110757.1 53721772 3097116 complement(1003007..1004239) 1 NC_006351.1 Weakly similar to Streptomyces coelicolor secreted protein SCO7396 or SC10G8.24c SWALL:Q9L181 (EMBL:AL939131) (445 aa) fasta scores: E(): 9.8e-08, 27.56% id in 439 aa; lipase 1004239 3097116 BPSS0746 Burkholderia pseudomallei K96243 lipase YP_110757.1 1003007 R 272560 CDS YP_110758.1 53721773 3095213 1004758..1005855 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.6e-13, 32.18% id in 407 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 5.5e-40, 42.22% id in 386 aa; outer membrane porin protein 1005855 3095213 BPSS0747 Burkholderia pseudomallei K96243 outer membrane porin protein YP_110758.1 1004758 D 272560 CDS YP_110759.1 53721774 3095214 complement(1006475..1006846) 1 NC_006351.1 Similar to Pseudomonas syringae pv. maculicola hypothetical protein SWALL:Q93TD7 (EMBL:AF359557) (126 aa) fasta scores: E(): 5e-20, 51.69% id in 118 aa, and to Agrobacterium tumefaciens hypothetical protein ATU1486 or AGR_C_2741 SWALL:Q8UFB2 (EMBL:AE009107) (129 aa) fasta scores: E(): 1.8e-15, 44.27% id in 131 aa; hypothetical protein 1006846 3095214 BPSS0748 Burkholderia pseudomallei K96243 hypothetical protein YP_110759.1 1006475 R 272560 CDS YP_110760.1 53721775 3096315 complement(1007013..1007813) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1484 SWALL:Q9I3M8 (EMBL:AE004577) (268 aa) fasta scores: E(): 2.9e-54, 56.01% id in 266 aa. C-terminal region is similar to Aeromonas salmonicida hypothetical transcriptional regulator SWALL:YEXN_AERSA (SWALL:P45785) (193 aa) fasta scores: E(): 2e-11, 35.86% id in 184 aa; GerE familyregulatory protein 1007813 3096315 BPSS0749 Burkholderia pseudomallei K96243 GerE familyregulatory protein YP_110760.1 1007013 R 272560 CDS YP_110761.1 53721776 3095118 1007935..1009344 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable amino acid permease pa1485 SWALL:Q9I3M7 (EMBL:AE004577) (455 aa) fasta scores: E(): 2.7e-90, 56.76% id in 451 aa. N-terminus is similar to the N-terminal region of Homo sapiens large neutral amino acids transporter small subunit 1 SLC7A5 or LAT1 or MPE16 SWALL:LAT1_HUMAN (SWALL:Q01650) (507 aa) fasta scores: E(): 4.5e-13, 25.57% id in 391 aa; amino acid permease 1009344 3095118 BPSS0750 Burkholderia pseudomallei K96243 amino acid permease YP_110761.1 1007935 D 272560 CDS YP_110762.1 53721777 3095119 1009386..1010516 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1486 SWALL:Q9I3M6 (EMBL:AE004577) (366 aa) fasta scores: E(): 1.3e-85, 67.47% id in 372 aa, and to Agrobacterium tumefaciens aminopeptidase ATU5242 or AGR_PAT_343 SWALL:Q8UK81 (EMBL:AE008947) (384 aa) fasta scores: E(): 1.2e-42, 44.79% id in 384 aa; peptidase 1010516 3095119 BPSS0751 Burkholderia pseudomallei K96243 peptidase YP_110762.1 1009386 D 272560 CDS YP_110763.1 53721778 3095201 complement(1010507..1012153) 1 NC_006351.1 Poor database matches. N-terminal region is weakly similar to Streptomyces coelicolor lipoprotein SCO6050 or SC1b5.10c SWALL:O69838 (EMBL:AL939126) (289 aa) fasta scores: E(): 3.9, 26.03% id in 315 aa; lipoprotein 1012153 3095201 BPSS0752 Burkholderia pseudomallei K96243 lipoprotein YP_110763.1 1010507 R 272560 CDS YP_110764.1 53721779 3095293 complement(1012328..1012648) 1 NC_006351.1 No significant database matches. Doubtful CDS; hypothetical protein 1012648 3095293 BPSS0753 Burkholderia pseudomallei K96243 hypothetical protein YP_110764.1 1012328 R 272560 CDS YP_110765.1 53721780 3095294 complement(1012673..1014904) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3893 SWALL:Q9HXC0 (EMBL:AE004806) (731 aa) fasta scores: E(): 1.2e-94, 41.24% id in 708 aa. C-terminal region is similar to Burkholderia cepacia fusaric acid resistance protein FusD SWALL:FUSD_BURCE (SWALL:P24129) (208 aa) fasta scores: E(): 2e-22, 43.5% id in 200 aa; hypothetical protein 1014904 3095294 BPSS0754 Burkholderia pseudomallei K96243 hypothetical protein YP_110765.1 1012673 R 272560 CDS YP_110766.1 53721781 3096111 1015115..1016125 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3895 SWALL:Q9HXB8 (EMBL:AE004807) (317 aa) fasta scores: E(): 1.2e-68, 57.84% id in 306 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0876 SWALL:Q9I569 (EMBL:AE004522) (314 aa) fasta scores: E(): 1.8e-59, 51.79% id in 307 aa. Similar to BPSL1971, 57.843% identity (58.033% ungapped) in 306 aa overlap; LysR family transcriptional regulator 1016125 3096111 BPSS0755 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110766.1 1015115 D 272560 CDS YP_110767.1 53721782 3097006 complement(1016647..1016949) 1 NC_006351.1 hypothetical protein 1016949 3097006 BPSS0756 Burkholderia pseudomallei K96243 hypothetical protein YP_110767.1 1016647 R 272560 CDS YP_110768.1 53721783 3097007 1017268..1018422 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.2e-17, 32.2% id in 413 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 3.1e-51, 47.38% id in 401 aa. Similar to BPSL2559, 54.271% identity (59.178% ungapped) in 398 aa overlap, and to BPSS0943, 50.382% identity (55.000% ungapped) in 393 aa overlap; porin protein 1018422 3097007 BPSS0757 Burkholderia pseudomallei K96243 porin protein YP_110768.1 1017268 D 272560 CDS YP_110769.1 53721784 3097066 1018536..1019000 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr5539 SWALL:Q98BJ9 (EMBL:AP003006) (156 aa) fasta scores: E(): 6.2e-35, 61.22% id in 147 aa, and to Caulobacter crescentus hypothetical protein cc1279 SWALL:Q9A8S2 (EMBL:AE005803) (151 aa) fasta scores: E(): 4.6e-25, 52.48% id in 141 aa; hypothetical protein 1019000 3097066 BPSS0758 Burkholderia pseudomallei K96243 hypothetical protein YP_110769.1 1018536 D 272560 CDS YP_110770.1 53721785 3095400 1019550..1020812 1 NC_006351.1 Similar to Escherichia coli cytosine permease CodB SWALL:CODB_ECOLI (SWALL:P25525) (419 aa) fasta scores: E(): 5.7e-44, 32.85% id in 414 aa, and to Pseudomonas aeruginosa cytosine permease pa0438 SWALL:Q9I679 (EMBL:AE004481) (416 aa) fasta scores: E(): 2.8e-44, 33.01% id in 415 aa; cytosine permease 1020812 codB 3095400 codB Burkholderia pseudomallei K96243 cytosine permease YP_110770.1 1019550 D 272560 CDS YP_110771.1 53721786 3095401 1020817..1022049 1 NC_006351.1 Similar to Clostridium perfringens hypothetical protein cpe0759 SWALL:Q8XMD0 (EMBL:AP003188) (399 aa) fasta scores: E(): 4.4e-10, 23.85% id in 415 aa, and to Clostridium acetobutylicum possible transcriptional regulator from leucine-rich protein cac1426 SWALL:Q97J60 (EMBL:AE007654) (397 aa) fasta scores: E(): 2.4e-08, 26.31% id in 399 aa; DNA-binding protein 1022049 3095401 BPSS0760 Burkholderia pseudomallei K96243 DNA-binding protein YP_110771.1 1020817 D 272560 CDS YP_110772.1 53721787 3096544 1022049..1023305 1 NC_006351.1 Similar to Escherichia coli cytosine deaminase CodA SWALL:CODA_ECOLI (SWALL:P25524) (426 aa) fasta scores: E(): 8.3e-86, 56.02% id in 407 aa, and to Salmonella typhimurium cytosine deaminase stm3334 SWALL:Q8ZLR0 (EMBL:AE008853) (426 aa) fasta scores: E(): 3.6e-88, 56.71% id in 402 aa; cytosine deaminase 1023305 codA 3096544 codA Burkholderia pseudomallei K96243 cytosine deaminase YP_110772.1 1022049 D 272560 CDS YP_110773.1 53721788 3095350 complement(1023400..1024737) 1 NC_006351.1 Similar to Agrobacterium vitis tartrate transporter TtuB SWALL:TUB3_AGRVI (SWALL:P70786) (449 aa) fasta scores: E(): 1.3e-55, 40.56% id in 424 aa, and to Ralstonia solanacearum probable permease transmembrane protein rsc2352 or rs01194 SWALL:Q8XWW8 (EMBL:AL646069) (442 aa) fasta scores: E(): 1.9e-59, 41.28% id in 419 aa; transporter protein 1024737 3095350 BPSS0762 Burkholderia pseudomallei K96243 transporter protein YP_110773.1 1023400 R 272560 CDS YP_110774.1 53721789 3096625 complement(1024933..1025865) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll0106 SWALL:Q98NK0 (EMBL:AP002994) (309 aa) fasta scores: E(): 4.3e-76, 65.48% id in 310 aa, and to Archaeoglobus fulgidus hypothetical protein af1210 SWALL:O29058 (EMBL:AE001021) (313 aa) fasta scores: E(): 2.9e-58, 51.14% id in 307 aa; hypothetical protein 1025865 3096625 BPSS0763 Burkholderia pseudomallei K96243 hypothetical protein YP_110774.1 1024933 R 272560 CDS YP_110775.1 53721790 3096626 complement(1025907..1026704) 1 NC_006351.1 Similar to Streptomyces galilaeus ketoacyl reductase AknIII SWALL:Q54190 (EMBL:D14040) (261 aa) fasta scores: E(): 6.2e-23, 37.98% id in 258 aa, and to Rhizobium loti probable short chain dehydrogenase mll1036 SWALL:Q98LG1 (EMBL:AP002996) (268 aa) fasta scores: E(): 1.8e-46, 54.51% id in 266 aa; short chain dehydrogenase 1026704 3096626 BPSS0764 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_110775.1 1025907 R 272560 CDS YP_110776.1 53721791 3095161 complement(1026819..1027535) 1 NC_006351.1 Similar to Rhizobium loti transcriptional regulator mlr7171 SWALL:Q986X5 (EMBL:AP003011) (218 aa) fasta scores: E(): 2.7e-26, 43.6% id in 211 aa, and to Rhizobium loti transcriptional regulator mll7255 SWALL:Q986Q3 (EMBL:AP003011) (218 aa) fasta scores: E(): 5.2e-20, 39.13% id in 207 aa; DNA-binding protein 1027535 3095161 BPSS0765 Burkholderia pseudomallei K96243 DNA-binding protein YP_110776.1 1026819 R 272560 CDS YP_110777.1 53721792 3095328 1027889..1029235 1 NC_006351.1 C-terminal region is similar to Yersinia pseudotuberculosis chloride channel protein EriC-like SWALL:ERIL_YERPS (SWALL:Q9AGD5) (429 aa) fasta scores: E(): 1e-20, 29.67% id in 401 aa, and to Zymomonas mobilis chloride channel protein Clc-B SWALL:Q9RNN4 (EMBL:AF179611) (425 aa) fasta scores: E(): 9.7e-66, 49.02% id in 410 aa. Possible alternative translational start site; voltage gated chloride channel 1029235 3095328 BPSS0766 Burkholderia pseudomallei K96243 voltage gated chloride channel YP_110777.1 1027889 D 272560 CDS YP_110778.1 53721793 3095329 complement(1029559..1029882) 1 NC_006351.1 hypothetical protein 1029882 3095329 BPSS0767 Burkholderia pseudomallei K96243 hypothetical protein YP_110778.1 1029559 R 272560 CDS YP_110779.1 53721794 3095221 complement(1030137..1030379) 1 NC_006351.1 Possible gene remnant. Similar to the C-terminal regions of Bradyrhizobium japonicum USDA 110 BLL6723 protein SWALL:Q89FH7 (EMBL:AP005959) (568 aa) fasta scores: E(): 2.1e-10, 52.27% id in 88 aa, and Francisella novicida acid phosphatase precursor acpA SWALL:Q47936 (EMBL:L39831) (514 aa) fasta scores: E(): 0.093, 38.59% id in 57 aa; hypothetical protein 1030379 3095221 BPSS0768 Burkholderia pseudomallei K96243 hypothetical protein YP_110779.1 1030137 R 272560 CDS YP_110780.1 53721795 3095308 complement(1030401..1031381) 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein ATU1617 or AGR_C_2981 SWALL:Q8UEY6 (EMBL:AE009119) (310 aa) fasta scores: E(): 1.5e-42, 46.78% id in 327 aa, and to Caulobacter crescentus hypothetical protein CC2313 SWALL:Q9A5Y4 (EMBL:AE005901) (328 aa) fasta scores: E(): 7.1e-33, 41.01% id in 334 aa; hypothetical protein 1031381 3095308 BPSS0769 Burkholderia pseudomallei K96243 hypothetical protein YP_110780.1 1030401 R 272560 CDS YP_110781.1 53721796 3095309 complement(1031753..1031920) 1 NC_006351.1 Doubtful CDS. Similar to the C-terminal region of Azoarcus evansii PaaB SWALL:Q9F9U8 (EMBL:AF176259) (103 aa) fasta scores: E(): 1.4, 50% id in 52 aa; hypothetical protein 1031920 3095309 BPSS0769A Burkholderia pseudomallei K96243 hypothetical protein YP_110781.1 1031753 R 272560 CDS YP_110782.1 53721797 3095096 complement(1031917..1032555) 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri response regulator UvrY SWALL:UVRY_ECOLI (SWALL:P07027) (218 aa) fasta scores: E(): 9.6e-15, 28.98% id in 207 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc0192 or rs00624 SWALL:Q8Y2Y9 (EMBL:AL646057) (215 aa) fasta scores: E(): 1.1e-32, 47.11% id in 208 aa. Similar to BPSS1161, 51.905% identity (51.905% ungapped) in 210 aa overlap, and to BPSS0835, 50.000% identity (50.237% ungapped) in 212 aa overlap; GerE family regulatory protein 1032555 3095096 BPSS0770 Burkholderia pseudomallei K96243 GerE family regulatory protein YP_110782.1 1031917 R 272560 CDS YP_110783.1 53721798 3094954 1033745..1033966 1 NC_006351.1 hypothetical protein 1033966 3094954 BPSS0771 Burkholderia pseudomallei K96243 hypothetical protein YP_110783.1 1033745 D 272560 CDS YP_110784.1 53721799 3094955 1034568..1035050 1 NC_006351.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsp0224 or rs05199 SWALL:Q8XT91 (EMBL:AL646077) (154 aa) fasta scores: E(): 3.9e-21, 45.75% id in 153 aa. Weakly similar to Salmonella typhimurium multiple antibiotic resistance protein MarR SWALL:MARR_SALTY (SWALL:Q56069) (144 aa) fasta scores: E(): 0.0013, 30.18% id in 106 aa; MarR family transcriptional regulator 1035050 3094955 BPSS0772 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_110784.1 1034568 D 272560 CDS YP_110785.1 53721800 3096873 1036929..1037864 1 NC_006351.1 Similar to Gallus gallus regucalcin SWALL:Q9I923 (EMBL:AB037935) (299 aa) fasta scores: E(): 4.9e-18, 29.96% id in 287 aa, and to Ralstonia solanacearum hypothetical protein rsc2755 or rs00099 SWALL:Q8XVS4 (EMBL:AL646071) (303 aa) fasta scores: E(): 1.1e-44, 51.23% id in 283 aa; hypothetical protein 1037864 3096873 BPSS0776 Burkholderia pseudomallei K96243 hypothetical protein YP_110785.1 1036929 D 272560 CDS YP_110786.1 53721801 3096874 1038482..1038898 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical protein r01249 or smc01810 SWALL:Q92QQ8 (EMBL:AL591786) (113 aa) fasta scores: E(): 1.3e-05, 27.92% id in 111 aa, and to the C-terminal region of Agrobacterium tumefaciens hypothetical protein ATU0309 or AGR_C_536 SWALL:Q8UII6 (EMBL:AE009002) (170 aa) fasta scores: E(): 2e-17, 49.03% id in 104 aa; hypothetical protein 1038898 3096874 BPSS0777 Burkholderia pseudomallei K96243 hypothetical protein YP_110786.1 1038482 D 272560 CDS YP_110787.1 53721802 3097229 complement(1038984..1039424) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll2249 SWALL:Q98IU1 (EMBL:AP002999) (130 aa) fasta scores: E(): 1.1e-31, 73.68% id in 114 aa, and to Ralstonia solanacearum hypothetical protein rsp1476 or rs03067 SWALL:Q8XQ10 (EMBL:AL646085) (141 aa) fasta scores: E(): 1.2e-31, 66.93% id in 124 aa; hypothetical protein 1039424 3097229 BPSS0778 Burkholderia pseudomallei K96243 hypothetical protein YP_110787.1 1038984 R 272560 CDS YP_110788.1 53721803 3095197 1041219..1042046 1 NC_006351.1 catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA; p-hydroxycinnamoyl CoA hydratase/lyase 1042046 3095197 BPSS0779 Burkholderia pseudomallei K96243 p-hydroxycinnamoyl CoA hydratase/lyase YP_110788.1 1041219 D 272560 CDS YP_110789.1 53721804 3095198 1042213..1043661 1 NC_006351.1 Similar to Pseudomonas sp. salicylaldehyde dehydrogenase NahF or DoxF SWALL:NAHF_PSESP (SWALL:Q52460) (483 aa) fasta scores: E(): 5.7e-79, 47.59% id in 479 aa, and to Pseudomonas fluorescens vanillin: NAD+ oxidoreductase Vdh SWALL:O69763 (EMBL:Y13067) (482 aa) fasta scores: E(): 2.8e-113, 67.14% id in 484 aa. Similar to BPSL0843, 64.694% identity (64.959% ungapped) in 490 aa overlap; aldehyde dehydrogenase 1043661 3095198 BPSS0780 Burkholderia pseudomallei K96243 aldehyde dehydrogenase YP_110789.1 1042213 D 272560 CDS YP_110790.1 53721805 3095155 1043679..1045535 1 NC_006351.1 catalyzes the conversion of ferulic acid to feruloyl-CoA; feruloyl-CoA synthase 1045535 3095155 BPSS0781 Burkholderia pseudomallei K96243 feruloyl-CoA synthase YP_110790.1 1043679 D 272560 CDS YP_110791.1 53721806 3095156 1045840..1047045 1 NC_006351.1 Similar to Pseudomonas putida 4-hydroxybenzoate transporter PcaK SWALL:PCAK_PSEPU (SWALL:Q51955) (448 aa) fasta scores: E(): 3.4e-17, 35.75% id in 400 aa, and to Pseudomonas fluorescens hypothetical metabolite transport protein SWALL:O69757 (EMBL:L49465) (405 aa) fasta scores: E(): 1.7e-60, 48.72% id in 392 aa; 3-hydroxyphenylpropionic transporter MhpT 1047045 3095156 BPSS0782 Burkholderia pseudomallei K96243 3-hydroxyphenylpropionic transporter MhpT YP_110791.1 1045840 D 272560 CDS YP_110792.1 53721807 3096523 1047507..1048646 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 7.5e-13, 32.93% id in 413 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp1594 or rs02151 SWALL:Q8XPP4 (EMBL:AL646085) (374 aa) fasta scores: E(): 8.3e-78, 57.75% id in 374 aa; outer membrane porin protein 1048646 3096523 BPSS0783 Burkholderia pseudomallei K96243 outer membrane porin protein YP_110792.1 1047507 D 272560 CDS YP_110793.1 53721808 3096706 1048719..1050443 1 NC_006351.1 Similar to Acinetobacter sp. ADP1 chlorogenate esterase HcaG SWALL:Q8RLZ8 (EMBL:L05770) (580 aa) fasta scores: E(): 1.1e-104, 51.63% id in 552 aa, and to Agrobacterium tumefaciens tannase ATU5261 or AGR_PAT_374 SWALL:Q8UK62 (EMBL:AE008948) (553 aa) fasta scores: E(): 1.3e-11, 26.96% id in 560 aa. Lower levels of similarity in the N-terminal regions; hypothetical protein 1050443 3096706 BPSS0784 Burkholderia pseudomallei K96243 hypothetical protein YP_110793.1 1048719 D 272560 CDS YP_110794.1 53721809 3096707 complement(1050707..1051531) 1 NC_006351.1 Weakly similar to Erwinia chrysanthemi pectin degradation repressor protein KdgR SWALL:KDGR_ERWCH (SWALL:P37728) (305 aa) fasta scores: E(): 9.6e-08, 26.56% id in 256 aa. Similar to Rhizobium meliloti transcriptional regulator protein rb0681 or smb21102 SWALL:Q92VL9 (EMBL:AL603644) (260 aa) fasta scores: E(): 7.5e-40, 48.83% id in 258 aa. Similar to BPSS2127, 76.557% identity (76.557% ungapped) in 273 aa overlap; IclR family transcriptional regulator 1051531 3096707 BPSS0785 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_110794.1 1050707 R 272560 CDS YP_110795.1 53721810 3095419 1051720..1052733 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella typhi D-ribose-binding periplasmic protein precursor RbsB SWALL:RBSB_SALTY (SWALL:P02926) (296 aa) fasta scores: E(): 3e-14, 27.09% id in 299 aa, and to Rhizobium loti ABC transporter binding protein mll8567 SWALL:Q982N3 (EMBL:AP003014) (346 aa) fasta scores: E(): 2e-14, 28.82% id in 340 aa. CDS is extended at the C-terminus in comparison to orthologues; ABC transporter periplasmic binding protein 1052733 3095419 BPSS0786 Burkholderia pseudomallei K96243 ABC transporter periplasmic binding protein YP_110795.1 1051720 D 272560 CDS YP_110796.1 53721811 3095572 1052730..1054286 1 NC_006351.1 Similar to Escherichia coli ribose transport ATP-binding protein rbsA SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 1.3e-41, 34.86% id in 499 aa, and to Streptomyces coelicolor ABC transporter protein, ATP binding component SCO2746 or SCC57A.17 SWALL:Q9RDI1 (EMBL:AL939113) (517 aa) fasta scores: E(): 5.3e-49, 40.51% id in 501 aa; ABC transporter ATP-binding protein 1054286 3095572 BPSS0787 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_110796.1 1052730 D 272560 CDS YP_110797.1 53721812 3095573 1054276..1055301 1 NC_006351.1 Similar to Escherichia coli ribose transport system permease rbsC SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 6.4e-29, 36.67% id in 319 aa, and to Rhizobium loti ABC transporter permease mll8565 SWALL:Q982N4 (EMBL:AP003014) (338 aa) fasta scores: E(): 2.6e-29, 34.04% id in 329 aa; transport system permease 1055301 3095573 BPSS0788 Burkholderia pseudomallei K96243 transport system permease YP_110797.1 1054276 D 272560 CDS YP_110798.1 53721813 3095617 1055298..1055618 1 NC_006351.1 Similar to Thermoplasma acidophilum hypothetical protein TA1392 SWALL:Q9HIE8 (EMBL:AL445067) (95 aa) fasta scores: E(): 0.00028, 27.77% id in 90 aa, and to Salmonella typhimurium, and Salmonella typhi hydrolase N-terminus stm0649 or sty0700 SWALL:Q8XFB1 (EMBL:AE008726) (113 aa) fasta scores: E(): 7.9e-05, 38.09% id in 84 aa. Possible pseudogene, similar to the N-terminal region of Escherichia coli altronate hydrolase UxaA SWALL:UXAA_ECOLI (SWALL:P42604) (495 aa) fasta scores: E(): 2.2e-05, 40% id in 70 aa; hydrolase N-terminus 1055618 3095617 BPSS0789 Burkholderia pseudomallei K96243 hydrolase N-terminus YP_110798.1 1055298 D 272560 CDS YP_110799.1 53721814 3095169 1055653..1056975 1 NC_006351.1 Similar to Salmonella typhi hydrolase C-terminus sty0701 SWALL:Q8Z8H4 (EMBL:AL627267) (390 aa) fasta scores: E(): 3.4e-39, 36.9% id in 401 aa, and to Brucella melitensis D-galactarate dehydratase bmeii0485 SWALL:Q8YCP3 (EMBL:AE009684) (433 aa) fasta scores: E(): 3.7e-34, 34.38% id in 413 aa. Possible pseudogene, similar to the C-terminal region of Escherichia coli altronate hydrolase UxaA SWALL:UXAA_ECOLI (SWALL:P42604) (495 aa) fasta scores: E(): 1.2e-20, 29.15% id in 415 aa; hydrolase C-terminus 1056975 3095169 BPSS0790 Burkholderia pseudomallei K96243 hydrolase C-terminus YP_110799.1 1055653 D 272560 CDS YP_110800.1 53721815 3095170 1057247..1058086 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein xac4185 SWALL:AAM39020 (EMBL:AE012069) (290 aa) fasta scores: E(): 1.5e-51, 53.73% id in 281 aa, and to Xanthomonas campestris hypothetical protein xcc4066 SWALL:AAM43287 (EMBL:AE012528) (290 aa) fasta scores: E(): 1e-49, 53.02% id in 281 aa; hypothetical protein 1058086 3095170 BPSS0791 Burkholderia pseudomallei K96243 hypothetical protein YP_110800.1 1057247 D 272560 CDS YP_110801.1 53721816 3095165 1058226..1058969 1 NC_006351.1 Similar to Escherichia coli oxidoreductase UcpA SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) fasta scores: E(): 4.2e-22, 41.5% id in 253 aa, and to Yersinia pestis oxidoreductase ypo1565 SWALL:Q8ZFW2 (EMBL:AJ414149) (246 aa) fasta scores: E(): 1.2e-52, 63.52% id in 244 aa; short chain dehydrogenase 1058969 3095165 BPSS0792 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_110801.1 1058226 D 272560 CDS YP_110802.1 53721817 3095375 1059045..1059887 1 NC_006351.1 Similar to Yersinia pestis hydrolase ypo1566 SWALL:Q8ZFW1 (EMBL:AJ414149) (280 aa) fasta scores: E(): 1.3e-85, 72.76% id in 279 aa, and to Xanthomonas axonopodis 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase/5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylase xac4187 SWALL:AAM39022 (EMBL:AE012069) (285 aa) fasta scores: E(): 3.4e-75, 65.1% id in 278 aa. Similar to BPSS2126, 73.285% identity (73.551% ungapped) in 277 aa overlap; fumarylacetoacetate (FAA) hydrolase 1059887 3095375 BPSS0793 Burkholderia pseudomallei K96243 fumarylacetoacetate (FAA) hydrolase YP_110802.1 1059045 D 272560 CDS YP_110803.1 53721818 3095376 1060055..1060831 1 NC_006351.1 Similar to Campylobacter jejuni oxidoreductase cj0485 SWALL:Q9PI24 (EMBL:AL139075) (262 aa) fasta scores: E(): 2e-41, 48.06% id in 258 aa, and to Bos taurus short-chain dehydrogenase/reductase SDR3 SWALL:Q9MYP6 (EMBL:AF202997) (270 aa) fasta scores: E(): 8.7e-22, 38.52% id in 244 aa; short chain dehydrogenase 1060831 3095376 BPSS0794 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_110803.1 1060055 D 272560 CDS YP_110804.1 53721819 3095209 1060867..1061205 1 NC_006351.1 Similar to Xanthomonas campestris hypothetical protein xcc4070 SWALL:AAM43291 (EMBL:AE012529) (125 aa) fasta scores: E(): 4.9e-13, 42.85% id in 112 aa, and to Xanthomonas axonopodis hypothetical protein xac4189 SWALL:AAM39024 (EMBL:AE012069) (119 aa) fasta scores: E(): 8.9e-13, 41.07% id in 112 aa; hypothetical protein 1061205 3095209 BPSS0795 Burkholderia pseudomallei K96243 hypothetical protein YP_110804.1 1060867 D 272560 CDS YP_110805.1 53721820 3097081 1063333..1068294 1 NC_006351.1 Similar to many low complexity proteins, including Rhizobium loti hypothetical glycine-rich protein mlr0587 SWALL:Q98MG7 (EMBL:AP002995) (3145 aa) fasta scores: E(): 1.3e-32, 24.78% id in 1743 aa. Possible alternative translational start site. Similar to BPSL1705, 65.523% identity (70.872% ungapped) in 1749 aa overlap; surface-exposed protein 1068294 3097081 BPSS0796 Burkholderia pseudomallei K96243 surface-exposed protein YP_110805.1 1063333 D 272560 CDS YP_110806.1 53721821 3097082 complement(1069167..1069508) 1 NC_006351.1 Similar to Rhodobacter capsulatus trans-acting regulatory protein HvrA SWALL:HVRA_RHOCA (SWALL:P42505) (102 aa) fasta scores: E(): 0.45, 29.41% id in 85 aa, and to Alcaligenes eutrophus H-NS-like protein SWALL:Q7WXF4 (EMBL:AY305378) (103 aa) fasta scores: E(): 2.4e-10, 44% id in 100 aa; H-NS-like protein 1069508 3097082 BPSS0796A Burkholderia pseudomallei K96243 H-NS-like protein YP_110806.1 1069167 R 272560 CDS YP_110807.1 53721822 3095069 complement(1069699..1070439) 1 NC_006351.1 Similar to the C-terminal region of Erwinia chrysanthemi pectin degradation repressor protein KdgR SWALL:KDGR_ERWCH (SWALL:P37728) (305 aa) fasta scores: E(): 2.2e-12, 29.71% id in 249 aa. Similar to Bacillus halodurans transcriptional regulator bh2137 SWALL:Q9KAZ9 (EMBL:AP001514) (251 aa) fasta scores: E(): 1e-13, 29.6% id in 250 aa. Similar to BPSS0284, 67.886% identity (67.886% ungapped) in 246 aa overlap; IclR family transcriptional regulator 1070439 3095069 BPSS0797 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_110807.1 1069699 R 272560 CDS YP_110808.1 53721823 3097238 complement(1070554..1071018) 1 NC_006351.1 Poor database matches. C-terminus is similar to the C-terminal region of Caulobacter crescentus hypothetical protein CC0121 SWALL:Q9ABU9 (EMBL:AE005686) (151 aa) fasta scores: E(): 9.4, 30.08% id in 123 aa; hypothetical protein 1071018 3097238 BPSS0798 Burkholderia pseudomallei K96243 hypothetical protein YP_110808.1 1070554 R 272560 CDS YP_110809.1 53721824 3097239 complement(1071034..1072254) 1 NC_006351.1 C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa2133 SWALL:Q9I1Y2 (EMBL:AE004640) (285 aa) fasta scores: E(): 4.7e-20, 34.22% id in 263 aa. Similar to the C-terminal region of Rhizobium loti hypothetical protein mlr5176 SWALL:Q98CF0 (EMBL:AP003005) (779 aa) fasta scores: E(): 2.8e-05, 23.17% id in 397 aa; hypothetical protein 1072254 3097239 BPSS0799 Burkholderia pseudomallei K96243 hypothetical protein YP_110809.1 1071034 R 272560 CDS YP_110810.1 53721825 3095067 complement(1073131..1073745) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1836 SWALL:Q9I2Q9 (EMBL:AE004609) (193 aa) fasta scores: E(): 6.8e-25, 40.95% id in 188 aa, and to Streptomyces coelicolor tetr-family transcriptional regulatory protein sco4480 or scd65.23C SWALL:Q9F2Q9 (EMBL:AL939120) (205 aa) fasta scores: E(): 8e-13, 31.25% id in 192 aa; TetR family regulatory protein 1073745 3095067 BPSS0800 Burkholderia pseudomallei K96243 TetR family regulatory protein YP_110810.1 1073131 R 272560 CDS YP_110811.1 53721826 3095741 1073860..1074297 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1835 SWALL:Q9I2R0 (EMBL:AE004609) (145 aa) fasta scores: E(): 1.5e-30, 60.28% id in 141 aa, and to Xanthomonas campestris hypothetical protein xcc3727 SWALL:AAM42985 (EMBL:AE012493) (158 aa) fasta scores: E(): 1.3e-18, 49.25% id in 134 aa; hypothetical protein 1074297 3095741 BPSS0801 Burkholderia pseudomallei K96243 hypothetical protein YP_110811.1 1073860 D 272560 CDS YP_110812.1 53721827 3095742 1074446..1075588 1 NC_006351.1 Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 8.7e-34, 33.6% id in 369 aa, and to Ralstonia solanacearum amino-acid transport signal peptide protein rsc3300 or rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 1.6e-60, 49.31% id in 367 aa. Similar to BPSL3284, 88.421% identity (88.421% ungapped) in 380 aa overlap; extracellular ligand binding protein 1075588 3095742 BPSS0802 Burkholderia pseudomallei K96243 extracellular ligand binding protein YP_110812.1 1074446 D 272560 CDS YP_110813.1 53721828 3094994 1076062..1076697 1 NC_006351.1 Similar to Bacillus cereus hemolysin III SWALL:HLY3_BACCE (SWALL:P54176) (219 aa) fasta scores: E(): 1.2e-31, 46.46% id in 198 aa, and to Neisseria meningitidis haemolysin nma1900 SWALL:Q9JTB2 (EMBL:AL162757) (208 aa) fasta scores: E(): 1.5e-45, 58.17% id in 208 aa; hemolysin 1076697 3094994 BPSS0803 Burkholderia pseudomallei K96243 hemolysin YP_110813.1 1076062 D 272560 CDS YP_110814.1 53721829 3095330 complement(1076755..1077132) 1 NC_006351.1 hypothetical protein 1077132 3095330 BPSS0804 Burkholderia pseudomallei K96243 hypothetical protein YP_110814.1 1076755 R 272560 CDS YP_110815.1 53721830 3095331 complement(1077778..1079844) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1727 SWALL:Q9I310 (EMBL:AE004599) (685 aa) fasta scores: E(): 1.4e-108, 47.58% id in 683 aa, and to Xanthomonas campestris GGDEF family protein xcc1911 SWALL:AAM41200 (EMBL:AE012295) (696 aa) fasta scores: E(): 3.3e-108, 46.72% id in 687 aa; hypothetical protein 1079844 3095331 BPSS0805 Burkholderia pseudomallei K96243 hypothetical protein YP_110815.1 1077778 R 272560 CDS YP_110816.1 53721831 3095387 complement(1080171..1080638) 1 NC_006351.1 Similar to Escherichia coli, Shigella flexneri, and Enterobacter aerogenes leucine-responsive regulatory protein Lrp SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 2.2e-18, 42.56% id in 148 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1377 or rs02081 SWALL:Q8XQA9 (EMBL:AL646084) (152 aa) fasta scores: E(): 6.2e-19, 42% id in 150 aa; leucine-responsive regulatory protein 1080638 3095387 BPSS0806 Burkholderia pseudomallei K96243 leucine-responsive regulatory protein YP_110816.1 1080171 R 272560 CDS YP_110817.1 53721832 3096175 1080971..1082356 1 NC_006351.1 Similar to Escherichia coli aromatic amino acid transport protein AroP SWALL:AROP_ECOLI (SWALL:P15993) (457 aa) fasta scores: E(): 5e-119, 68% id in 450 aa, and to Yersinia pestis aromatic amino acid transport protein ypo3421 SWALL:Q8ZBI9 (EMBL:AJ414157) (465 aa) fasta scores: E(): 1.1e-127, 72.99% id in 448 aa; aromatic amino acid transport protein 1082356 aroP 3096175 aroP Burkholderia pseudomallei K96243 aromatic amino acid transport protein YP_110817.1 1080971 D 272560 CDS YP_110818.1 53721833 3096837 1082388..1083590 1 NC_006351.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1083590 tyrB1 3096837 tyrB1 Burkholderia pseudomallei K96243 aromatic amino acid aminotransferase YP_110818.1 1082388 D 272560 CDS YP_110819.1 53721834 3095857 1083912..1084301 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp1510 or rs03031 SWALL:Q8XPX6 (EMBL:AL646085) (132 aa) fasta scores: E(): 7e-36, 71.53% id in 130 aa, and to Streptomyces coelicolor hypothetical protein SCO7305 or SC5F8.15c SWALL:Q9K4K9 (EMBL:AL939131) (117 aa) fasta scores: E(): 2.5e-05, 31.96% id in 122 aa; hypothetical protein 1084301 3095857 BPSS0809 Burkholderia pseudomallei K96243 hypothetical protein YP_110819.1 1083912 D 272560 CDS YP_110820.1 53721835 3095858 1085445..1086068 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll3172 SWALL:Q98GU4 (EMBL:AP003001) (179 aa) fasta scores: E(): 5.5e-30, 49.12% id in 171 aa, and to Caulobacter crescentus acetyltransferase, GNAT family cc1083 SWALL:Q9A9B1 (EMBL:AE005785) (173 aa) fasta scores: E(): 1.9e-25, 45.56% id in 169 aa; hypothetical protein 1086068 3095858 BPSS0810 Burkholderia pseudomallei K96243 hypothetical protein YP_110820.1 1085445 D 272560 CDS YP_110821.1 53721836 3095864 complement(1086233..1086967) 1 NC_006351.1 C-terminal region is similar to Bradyrhizobium japonicum ID748 SWALL:Q9AMY0 (EMBL:AF322013) (225 aa) fasta scores: E(): 1.6e-36, 48.5% id in 200 aa, and to the C-terminal region of Pseudomonas aeruginosa hypothetical protein pa1894 SWALL:Q9I2K3 (EMBL:AE004615) (230 aa) fasta scores: E(): 5.2e-24, 41.27% id in 189 aa; hypothetical protein 1086967 3095864 BPSS0811 Burkholderia pseudomallei K96243 hypothetical protein YP_110821.1 1086233 R 272560 CDS YP_110822.1 53721837 3095409 complement(1086995..1088428) 1 NC_006351.1 Poor database matches. C-terminus is weakly similar to the C-terminal region of Streptomyces hygroscopicus OrfE protein SWALL:Q54310 (EMBL:X86780) (465 aa) fasta scores: E(): 0.0069, 24.92% id in 353 aa; hypothetical protein 1088428 3095409 BPSS0812 Burkholderia pseudomallei K96243 hypothetical protein YP_110822.1 1086995 R 272560 CDS YP_110823.1 53721838 3095410 1088798..1089277 1 NC_006351.1 hypothetical protein 1089277 3095410 BPSS0812A Burkholderia pseudomallei K96243 hypothetical protein YP_110823.1 1088798 D 272560 CDS YP_110824.1 53721839 3095463 1090088..1091503 1 NC_006351.1 Similar to the C-terminal regions of Anabaena sp. two-component sensor histidine kinase alr0642 SWALL:Q8YZ45 (EMBL:AP003583) (735 aa) fasta scores: E(): 5.4e-38, 32.41% id in 472 aa, and Anabaena sp. two-component sensor histidine kinase alr3225 SWALL:Q8YS66 (EMBL:AP003592) (986 aa) fasta scores: E(): 1.7e-33, 32.37% id in 451 aa. Possible gene remnant, CDS membrane spanning domains. C-terminal rgion is similar to C-terminal regions of BPSS1646, 50.765% identity (54.426% ungapped) in 327 aa overlap, and BPSL0703, 52.273% identity (54.949% ungapped) in 308 aa overlap; sensor histidine kinase 1091503 3095463 BPSS0813 Burkholderia pseudomallei K96243 sensor histidine kinase YP_110824.1 1090088 D 272560 CDS YP_110825.1 53721840 3096165 1091514..1091882 1 NC_006351.1 Similar to Bacillus subtilis chemotaxis protein CheY homolog CheY or CheB SWALL:CHEY_BACSU (SWALL:P24072) (119 aa) fasta scores: E(): 6.4e-07, 32.43% id in 111 aa, and to Vibrio cholerae response regulator vc1082 SWALL:Q9KT23 (EMBL:AE004189) (121 aa) fasta scores: E(): 4.9e-17, 47.5% id in 120 aa. Similar to BPSS2344, 62.810% identity (62.810% ungapped) in 121 aa overlap; chemotaxis protein 1091882 3096165 BPSS0814 Burkholderia pseudomallei K96243 chemotaxis protein YP_110825.1 1091514 D 272560 CDS YP_110826.1 53721841 3096166 1091866..1092486 1 NC_006351.1 Similar to Vibrio cholerae hypothetical protein vc1083 SWALL:Q9KT22 (EMBL:AE004189) (194 aa) fasta scores: E(): 1.2e-12, 32.83% id in 201 aa. N-terminus is similar to the N-terminal rgion of Bacillus subtilis chemotaxis protein CheC SWALL:CHEC_BACSU (SWALL:P40403) (209 aa) fasta scores: E(): 0.0046, 28.22% id in 124 aa; hypothetical protein 1092486 3096166 BPSS0815 Burkholderia pseudomallei K96243 hypothetical protein YP_110826.1 1091866 D 272560 CDS YP_110827.1 53721842 3095254 complement(1092521..1095061) 1 NC_006351.1 Internal region is similar to an internal region of Escherichia coli penicillin-binding protein 1c pbpc or b2519 SWALL:PBPC_ECOLI (SWALL:P76577) (770 aa) fasta scores: E(): 2.3e-29, 32.8% id in 631 aa. C-terminus is similar to the C-terminal region of Leptospira interrogans penicillin-binding protein 1F LA2187 SWALL:AAN49386 (EMBL:AE011390) (709 aa) fasta scores: E(): 3.8e-43, 35.27% id in 771 aa. Possible alternative translational start site; penicillin-binding protein 1095061 3095254 BPSS0816 Burkholderia pseudomallei K96243 penicillin-binding protein YP_110827.1 1092521 R 272560 CDS YP_110828.1 53721843 3096108 complement(1095327..1101467) 1 NC_006351.1 Weakly similar to Anabaena sp. hypothetical protein ALL5100 SWALL:YFA0_ANASP (SWALL:Q8YM40) (1906 aa) fasta scores: E(): 4e-12, 21.2% id in 2056 aa; hypothetical protein 1101467 3096108 BPSS0817 Burkholderia pseudomallei K96243 hypothetical protein YP_110828.1 1095327 R 272560 CDS YP_110829.1 53721844 3096109 1102008..1102562 1 NC_006351.1 Poor database matches. Weakly similar to an internal region of Neisseria meningitidis hypothetical protein Nmb0593 nmb0593 SWALL:Q9K0K2 (EMBL:AE002415) (808 aa) fasta scores: E(): 8.9, 26.28% id in 156 aa; hypothetical protein 1102562 3096109 BPSS0818 Burkholderia pseudomallei K96243 hypothetical protein YP_110829.1 1102008 D 272560 CDS YP_110830.1 53721845 3095286 1103628..1104098 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein SCO4918 or SCK13.10c SWALL:Q9AD81 (EMBL:AL939121) (145 aa) fasta scores: E(): 0.62, 30.96% id in 155 aa; hypothetical protein 1104098 3095286 BPSS0819 Burkholderia pseudomallei K96243 hypothetical protein YP_110830.1 1103628 D 272560 CDS YP_110831.1 53721846 3095822 1104095..1106299 1 NC_006351.1 Similar to Escherichia coli leucyl-tRNA synthetase LeuS SWALL:SYL_ECOLI (SWALL:P07813) (860 aa) fasta scores: E(): 1.1e-34, 30.27% id in 806 aa, and to Thermotoga maritima leucyl-tRNA synthetase leus or tm0168 SWALL:SYL_THEMA (SWALL:Q9WY15) (824 aa) fasta scores: E(): 7.5e-38, 33.33% id in 765 aa. CDS is truncated at the C-terminus in comparison to some orthologues; tRNA synthetase 1106299 3095822 BPSS0820 Burkholderia pseudomallei K96243 tRNA synthetase YP_110831.1 1104095 D 272560 CDS YP_110832.1 53721847 3095823 1106296..1107216 1 NC_006351.1 Poor database matches. C-terminal region is weakly similar to Halobacterium sp. hypothetical protein VNG0713C SWALL:Q9HRG3 (EMBL:AE005016) (231 aa) fasta scores: E(): 0.032, 29.74% id in 232 aa; hypothetical protein 1107216 3095823 BPSS0821 Burkholderia pseudomallei K96243 hypothetical protein YP_110832.1 1106296 D 272560 CDS YP_110833.1 53721848 3097044 1107219..1108121 1 NC_006351.1 Poor database matches. Weakly similar to an internal region of Streptomyces coelicolor hypothetical protein SCO6522 or SC5C7.07 SWALL:O86704 (EMBL:AL939128) (480 aa) fasta scores: E(): 0.13, 29.41% id in 306 aa; hypothetical protein 1108121 3097044 BPSS0822 Burkholderia pseudomallei K96243 hypothetical protein YP_110833.1 1107219 D 272560 CDS YP_110834.1 53721849 3095270 1108118..1109731 1 NC_006351.1 Poor database matches. Weakly similar to an internal region of Streptomyces coelicolor hypothetical protein SCO6994 or SC8f11.20c SWALL:Q9KZF9 (EMBL:AL939130) (1086 aa) fasta scores: E(): 1.7, 26.23% id in 587 aa; hypothetical protein 1109731 3095270 BPSS0823 Burkholderia pseudomallei K96243 hypothetical protein YP_110834.1 1108118 D 272560 CDS YP_110835.1 53721850 3095271 1109724..1110617 1 NC_006351.1 Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 1.8e-24, 34.02% id in 291 aa, and to Pseudomonas aeruginosa hypothetical protein pa2310 SWALL:Q9I1G5 (EMBL:AE004657) (295 aa) fasta scores: E(): 1.1e-33, 40.07% id in 287 aa; dioxygenase 1110617 3095271 BPSS0824 Burkholderia pseudomallei K96243 dioxygenase YP_110835.1 1109724 D 272560 CDS YP_110836.1 53721851 3096947 complement(1110581..1111288) 1 NC_006351.1 Poor database matches. C-terminus is similar to the C-terminal region of Rhizobium loti hypothetical protein mlr1181 SWALL:Q98L47 (EMBL:AP002996) (218 aa) fasta scores: E(): 1.8e-12, 34.54% id in 165 aa. Possible alternative translational start site; hypothetical protein 1111288 3096947 BPSS0825 Burkholderia pseudomallei K96243 hypothetical protein YP_110836.1 1110581 R 272560 CDS YP_110837.1 53721852 3096789 1111300..1112457 1 NC_006351.1 Similar to Streptomyces clavuligerus isopenicillin N epimerase CefD SWALL:CEFD_STRCL (SWALL:P18549) (397 aa) fasta scores: E(): 2.5e-28, 36.36% id in 385 aa, and to Ralstonia solanacearum isopenicillin N epimerase rsp0696 or rs01753 SWALL:Q8XRY5 (EMBL:AL646080) (419 aa) fasta scores: E(): 5.3e-39, 37.17% id in 390 aa; aminotransferase class-V 1112457 3096789 BPSS0826 Burkholderia pseudomallei K96243 aminotransferase class-V YP_110837.1 1111300 D 272560 CDS YP_110838.1 53721853 3096790 1113438..1115375 1 NC_006351.1 C-terminus is similar to the C-terminal region of Vibrio parahaemolyticus microbial collagenase precursor PrtVp SWALL:COLA_VIBPA (SWALL:Q56696) (587 aa) fasta scores: E(): 3.4e-43, 31.36% id in 542 aa. Similar to the N-terminal region of Streptomyces coelicolor SC10A5.17 protein SCO5912 or SC10A5.17 SWALL:O54108 (EMBL:AL939125) (865 aa) fasta scores: E(): 2.8e-63, 35.88% id in 627 aa. Similar to BPSS0666, 81.329% identity (81.458% ungapped) in 632 aa overlap; peptidase 1115375 3096790 BPSS0827 Burkholderia pseudomallei K96243 peptidase YP_110838.1 1113438 D 272560 CDS YP_110839.1 53721854 3096527 complement(1115663..1116001) 1 NC_006351.1 Poor database matches. Similar to an internal region of Archaeoglobus fulgidus hypothetical protein AF0070 SWALL:Y070_ARCFU (SWALL:O30166) (353 aa) fasta scores: E(): 7.7, 27.45% id in 102 aa. Similar to BPSS1748, 51.042% identity (55.682% ungapped) in 96 aa overlap; hypothetical protein 1116001 3096527 BPSS0828 Burkholderia pseudomallei K96243 hypothetical protein YP_110839.1 1115663 R 272560 CDS YP_110840.1 53721855 3095140 complement(1116654..1117820) 1 NC_006351.1 associated with the biosynthesis repression of 4-hydroxy-2-alkylquinolines (HAQs) and HAQ-analogs, which act as extracellular signals that interact with quorum sensing; monooxygenase 1117820 3095140 BPSS0829 Burkholderia pseudomallei K96243 monooxygenase YP_110840.1 1116654 R 272560 CDS YP_110841.1 53721856 3095141 complement(1118418..1119161) 1 NC_006351.1 N-terminal region is similar to Pseudomonas aeruginosa probable transcriptional regulator pa4499 SWALL:Q9HVS2 (EMBL:AE004863) (187 aa) fasta scores: E(): 1.9e-31, 55.49% id in 182 aa, and to Clostridium acetobutylicum predicted transcriptional regulator cac0841 SWALL:Q97KS5 (EMBL:AE007599) (179 aa) fasta scores: E(): 1.1e-08, 29.05% id in 179 aa. CDS is extended at the C-terminus in comparison to orthologues; DNA-binding protein 1119161 3095141 BPSS0830 Burkholderia pseudomallei K96243 DNA-binding protein YP_110841.1 1118418 R 272560 CDS YP_110842.1 53721857 3095804 1119533..1119721 1 NC_006351.1 hypothetical protein 1119721 3095804 BPSS0831 Burkholderia pseudomallei K96243 hypothetical protein YP_110842.1 1119533 D 272560 CDS YP_110843.1 53721858 3096691 complement(1119990..1120478) 1 NC_006351.1 hypothetical protein 1120478 3096691 BPSS0832 Burkholderia pseudomallei K96243 hypothetical protein YP_110843.1 1119990 R 272560 CDS YP_110844.1 53721859 3096692 1120668..1120958 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1512 or rs03792 SWALL:Q8XZ92 (EMBL:AL646065) (92 aa) fasta scores: E(): 1.2e-08, 46.42% id in 84 aa, and to Escherichia coli hypothetical protein YrdB SWALL:YRDB_ECOLI (SWALL:P45795) (85 aa) fasta scores: E(): 0.34, 32.87% id in 73 aa. Similar to BPSS0598, 59.140% identity (60.440% ungapped) in 93 aa overlap; hypothetical protein 1120958 3096692 BPSS0833 Burkholderia pseudomallei K96243 hypothetical protein YP_110844.1 1120668 D 272560 CDS YP_110845.1 53721860 3096951 1121027..1121263 1 NC_006351.1 hypothetical protein 1121263 3096951 BPSS0834 Burkholderia pseudomallei K96243 hypothetical protein YP_110845.1 1121027 D 272560 CDS YP_110846.1 53721861 3094906 complement(1121342..1121989) 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri response regulator UvrYSWALL:UVRY_ECOLI (SWALL:P07027) (218 aa) fasta scores: E(): 4.4e-24, 36.84% id in 209 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc0192 or rs00624 SWALL:Q8Y2Y9 (EMBL:AL646057) (215 aa) fasta scores: E(): 7.9e-48, 60.09% id in 213 aa. Similar to BPSS1161, 81.308% identity (81.308% ungapped) in 214 aa overlap, and to BPSS0770, 50.000% identity (50.237% ungapped) in 212 aa overlap; response regulator protein 1121989 3094906 BPSS0835 Burkholderia pseudomallei K96243 response regulator protein YP_110846.1 1121342 R 272560 CDS YP_110847.1 53721862 3094907 1122557..1123015 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp1561 or rs02117 SWALL:Q8XPS7 (EMBL:AL646085) (151 aa) fasta scores: E(): 1e-14, 41.89% id in 148 aa, and to Pseudomonas aeruginosa hypothetical protein pa3309 SWALL:Q9HYT5 (EMBL:AE004753) (151 aa) fasta scores: E(): 2.1e-13, 40.94% id in 149 aa; universal stress protein 1123015 3094907 BPSS0836 Burkholderia pseudomallei K96243 universal stress protein YP_110847.1 1122557 D 272560 CDS YP_110848.1 53721863 3096403 complement(1123382..1124221) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc0185 or rs00616 SWALL:Q8Y2Z6 (EMBL:AL646057) (279 aa) fasta scores: E(): 5e-29, 35.56% id in 284 aa, and to Bradyrhizobium japonicum hypothetical protein SWALL:Q03082 (EMBL:L07487) (277 aa) fasta scores: E(): 1.5e-24, 38.24% id in 285 aa; hypothetical protein 1124221 3096403 BPSS0837 Burkholderia pseudomallei K96243 hypothetical protein YP_110848.1 1123382 R 272560 CDS YP_110849.1 53721864 3095017 complement(1124218..1124712) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp1561 or rs02117 SWALL:Q8XPS7 (EMBL:AL646085) (151 aa) fasta scores: E(): 3.7e-18, 46.75% id in 154 aa, and to Ralstonia solanacearum hypothetical protein rsc0184 or rs00615 SWALL:Q8Y2Z7 (EMBL:AL646057) (166 aa) fasta scores: E(): 2.3e-16, 41.61% id in 161 aa; universal stress protein 1124712 3095017 BPSS0838 Burkholderia pseudomallei K96243 universal stress protein YP_110849.1 1124218 R 272560 CDS YP_110850.1 53721865 3095018 complement(1124884..1125723) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc0185 or rs00616 SWALL:Q8Y2Z6 (EMBL:AL646057) (279 aa) fasta scores: E(): 5.5e-39, 42.14% id in 280 aa, and to Rhizobium loti hypothetical protein mll0142 SWALL:Q98NH2 (EMBL:AP002994) (277 aa) fasta scores: E(): 1.6e-23, 33.33% id in 285 aa; hypothetical protein 1125723 3095018 BPSS0839 Burkholderia pseudomallei K96243 hypothetical protein YP_110850.1 1124884 R 272560 CDS YP_110851.1 53721866 3095097 1125973..1127013 1 NC_006351.1 Similar to Bacillus subtilis sorbitol dehydrogenase GutB SWALL:DHSO_BACSU (SWALL:Q06004) (352 aa) fasta scores: E(): 1.1e-25, 30.25% id in 347 aa, and to Ralstonia solanacearum probable zinc-dependent alcohol dehydrogenase oxidoreductase rsc0194 or rs00626 SWALL:Q8Y2Y7 (EMBL:AL646058) (345 aa) fasta scores: E(): 1.1e-97, 73.46% id in 343 aa; zinc-binding dehydrogenase 1127013 3095097 BPSS0840 Burkholderia pseudomallei K96243 zinc-binding dehydrogenase YP_110851.1 1125973 D 272560 CDS YP_110852.1 53721867 3095145 1127458..1128504 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0396 or rs00824 SWALL:Q8XSS1 (EMBL:AL646078) (326 aa) fasta scores: E(): 4.5e-39, 38.19% id in 322 aa, and to Xanthomonas campestris hypothetical protein xcc1731 SWALL:Q8P9W4 (EMBL:AE012274) (330 aa) fasta scores: E(): 1.3e-29, 35.46% id in 313 aa. Possible alternative upstream translational start sites. CDS is extended at the C-terminus in comparison to some orthologues; hypothetical protein 1128504 3095145 BPSS0841 Burkholderia pseudomallei K96243 hypothetical protein YP_110852.1 1127458 D 272560 CDS YP_110853.1 53721868 3095146 1128693..1129901 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1445 or rs03862 SWALL:Q8XZF6 (EMBL:AL646064) (400 aa) fasta scores: E(): 7.6e-85, 60% id in 400 aa, and to Klebsiella pneumoniae hypothetical protein SWALL:O87757 (EMBL:AJ011907) (404 aa) fasta scores: E(): 2.9e-76, 54.78% id in 376 aa; transporter protein 1129901 3095146 BPSS0842 Burkholderia pseudomallei K96243 transporter protein YP_110853.1 1128693 D 272560 CDS YP_110854.1 53721869 3095397 1130412..1131173 1 NC_006351.1 Similar to Bacillus megaterium glucose 1-dehydrogenase II GdhII SWALL:DHG2_BACME (SWALL:P39483) (261 aa) fasta scores: E(): 4.2e-10, 30.54% id in 203 aa, and to Pseudomonas aeruginosa probable short chain dehydrogenase pa0117 SWALL:Q9I715 (EMBL:AE004450) (242 aa) fasta scores: E(): 6.2e-30, 41.9% id in 241 aa; short chain dehydrogenase 1131173 3095397 BPSS0843 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_110854.1 1130412 D 272560 CDS YP_110855.1 53721870 3096187 1131189..1132058 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2095 SWALL:Q9I220 (EMBL:AE004637) (281 aa) fasta scores: E(): 3.2e-55, 57.66% id in 274 aa, and to Streptomyces clavuligerus methyltransferase CmcJ SWALL:O85727 (EMBL:AF073896) (310 aa) fasta scores: E(): 9e-17, 34.24% id in 292 aa; hypothetical protein 1132058 3096187 BPSS0844 Burkholderia pseudomallei K96243 hypothetical protein YP_110855.1 1131189 D 272560 CDS YP_110856.1 53721871 3095836 1133021..1134406 1 NC_006351.1 Similar to Salmonella typhimurium proline-specific permease ProY SWALL:PROY_SALTY (SWALL:P37460) (456 aa) fasta scores: E(): 2.9e-93, 52.62% id in 439 aa, and to Bacillus subtilis amino acid transporter YtnA SWALL:O34618 (EMBL:AF008220) (463 aa) fasta scores: E(): 2.3e-119, 65.2% id in 457 aa. Similar to BPSL3256, 66.667% identity (66.667% ungapped) in 438 aa overlap; permease 1134406 proY 3095836 proY Burkholderia pseudomallei K96243 permease YP_110856.1 1133021 D 272560 CDS YP_110857.1 53721872 3095137 complement(1134960..1135202) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein msr0960 SWALL:Q98LM9 (EMBL:AP002996) (83 aa) fasta scores: E(): 7.7e-06, 41.79% id in 67 aa, and to Shewanella oneidensis transcriptional regulator, Cro/CI family SC1469 SWALL:AAN54530 (EMBL:AE015592) (84 aa) fasta scores: E(): 5.7e-05, 44.44% id in 63 aa; DNA-binding protein 1135202 msr0960 3095137 msr0960 Burkholderia pseudomallei K96243 DNA-binding protein YP_110857.1 1134960 R 272560 CDS YP_110858.1 53721873 3096188 1135347..1135643 1 NC_006351.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 6.3e-13, 52.04% id in 98 aa, and to Escherichia coli Lee encoded regulator Ler SWALL:Q8VTF2 (EMBL:AF328682) (129 aa) fasta scores: E(): 0.017, 28% id in 100 aa; hypothetical protein 1135643 3096188 BPSS0846 Burkholderia pseudomallei K96243 hypothetical protein YP_110858.1 1135347 D 272560 CDS YP_110859.1 53721874 3095447 complement(1136037..1137353) 1 NC_006351.1 C-terminal region is similar to Xanthomonas axonopodis hypothetical protein xac0854 SWALL:AAM35742 (EMBL:AE011717) (434 aa) fasta scores: E(): 3.7e-81, 56.28% id in 382 aa. Full length CDS is similar to Agrobacterium tumefaciens acyl-CoA dehydrogenase Acd SWALL:Q8UAD5 (EMBL:AE009274) (451 aa) fasta scores: E(): 3.9e-41, 34.7% id in 438 aa; hypothetical protein 1137353 3095447 BPSS0847 Burkholderia pseudomallei K96243 hypothetical protein YP_110859.1 1136037 R 272560 CDS YP_110860.1 53721875 3096230 complement(1137775..1138272) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2768 SWALL:Q9I075 (EMBL:AE004704) (160 aa) fasta scores: E(): 1.3e-34, 58.55% id in 152 aa; hypothetical protein 1138272 3096230 BPSS0848 Burkholderia pseudomallei K96243 hypothetical protein YP_110860.1 1137775 R 272560 CDS YP_110861.1 53721876 3096231 complement(1138390..1139310) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0830 SWALL:Q9I5A9 (EMBL:AE004517) (277 aa) fasta scores: E(): 3e-33, 42% id in 269 aa, and to Caulobacter crescentus FF domain protein cc1344 SWALL:Q9A8K9 (EMBL:AE005810) (285 aa) fasta scores: E(): 1.4e-28, 37.18% id in 277 aa. Similar to 58.503% identity (59.930% ungapped) in 294 aa overlap, and to BPSS1914, 58.503% identity (59.930% ungapped) in 294 aa overlap, and to BPSS1822, 50.523% identity (51.971% ungapped) in 287 aa overlap; hypothetical protein 1139310 3096231 BPSS0849 Burkholderia pseudomallei K96243 hypothetical protein YP_110861.1 1138390 R 272560 CDS YP_110862.1 53721877 3095652 1139921..1140265 1 NC_006351.1 Similar to Bradyrhizobium japonicum BLL1287 protein SWALL:BAC46552 (EMBL:AP005939) (115 aa) fasta scores: E(): 3e-14, 44.73% id in 114 aa, and to the C-terminal region of Xanthomonas axonopodis hypothetical protein xac4063 SWALL:AAM38898 (EMBL:AE012054) (154 aa) fasta scores: E(): 7.6e-05, 36.44% id in 107 aa; hypothetical protein 1140265 3095652 BPSS0850 Burkholderia pseudomallei K96243 hypothetical protein YP_110862.1 1139921 D 272560 CDS YP_110863.1 53721878 3096750 1140420..1141766 1 NC_006351.1 Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component A NtaA or NmoA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 5e-62, 45.23% id in 451 aa, and to Rhizobium loti nitrilotriacetate monooxygenase component a mll9178 SWALL:Q981Y9 (EMBL:AP003015) (448 aa) fasta scores: E(): 1.8e-78, 50.57% id in 433 aa; nitrilotriacetate monooxygenase component A 1141766 3096750 BPSS0851 Burkholderia pseudomallei K96243 nitrilotriacetate monooxygenase component A YP_110863.1 1140420 D 272560 CDS YP_110864.1 53721879 3096751 1142274..1143245 1 NC_006351.1 Similar to Crithidia fasciculata inosine-uridine preferring nucleoside hydrolase IunH SWALL:IUNH_CRIFA (SWALL:Q27546) (314 aa) fasta scores: E(): 5.3e-27, 36.73% id in 294 aa, and to Rhizobium meliloti nucleoside hydrolase r02906 or smc03175 SWALL:Q92LV9 (EMBL:AL591792) (317 aa) fasta scores: E(): 1.6e-60, 54.65% id in 322 aa; inosine-uridine preferring nucleoside hydrolase 1143245 3096751 BPSS0852 Burkholderia pseudomallei K96243 inosine-uridine preferring nucleoside hydrolase YP_110864.1 1142274 D 272560 CDS YP_110865.1 53721880 3096329 complement(1143269..1144201) 1 NC_006351.1 Similar to Escherichia coli ribokinase RbsK SWALL:RBSK_ECOLI (SWALL:P05054) (309 aa) fasta scores: E(): 2.4e-26, 34.65% id in 303 aa, and to Agrobacterium tumefaciens ribokinase ATU4847 or AGR_L_78 SWALL:Q8U6G0 (EMBL:AE009413) (312 aa) fasta scores: E(): 3.2e-63, 56.67% id in 307 aa; ribokinase 1144201 3096329 BPSS0853 Burkholderia pseudomallei K96243 ribokinase YP_110865.1 1143269 R 272560 CDS YP_110866.1 53721881 3095448 1144496..1144987 1 NC_006351.1 Poor database matches. Weakly similar to Oryza sativa hypothetical protein SWALL:Q94LB7 (EMBL:AC084404) (179 aa) fasta scores: E(): 2.5, 29.44% id in 163 aa; hypothetical protein 1144987 3095448 BPSS0854 Burkholderia pseudomallei K96243 hypothetical protein YP_110866.1 1144496 D 272560 CDS YP_110867.1 53721882 3095449 1145206..1146900 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1865 SWALL:Q9I2N0 (EMBL:AE004612) (559 aa) fasta scores: E(): 4.5e-114, 53.97% id in 554 aa. Weakly similar to the C-terminal region of Homo sapiens hypothetical protein KIAA1018 SWALL:Q9Y2M0 (EMBL:AB023235) (1017 aa) fasta scores: E(): 3.3e-08, 23.76% id in 648 aa; hypothetical protein 1146900 3095449 BPSS0855 Burkholderia pseudomallei K96243 hypothetical protein YP_110867.1 1145206 D 272560 CDS YP_110868.1 53721883 3096201 1146897..1149164 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1866 SWALL:Q9I2M9 (EMBL:AE004612) (758 aa) fasta scores: E(): 3.9e-181, 61.17% id in 752 aa, and to Listeria innocua hypothetical protein lin0195 SWALL:Q92FB1 (EMBL:AL596163) (779 aa) fasta scores: E(): 8.1e-86, 35.45% id in 770 aa; hypothetical protein 1149164 3096201 BPSS0856 Burkholderia pseudomallei K96243 hypothetical protein YP_110868.1 1146897 D 272560 CDS YP_110869.1 53721884 3095348 1149199..1150482 1 NC_006351.1 No significant database matches to the full length CDS. Internal region is similar to Pseudomonas sp. ON4a L-2-amino-thiazoline-4-carboxylic acid hydrolase SWALL:Q9FB06 (EMBL:AB029899) (183 aa) fasta scores: E(): 2.6e-35, 72.83% id in 173 aa, and to Zymomonas mobilis hypothetical protein SWALL:Q9FDK5 (EMBL:AF212041) (160 aa) fasta scores: E(): 4e-24, 56.95% id in 151 aa. Possible alternative translational start site. CDS is extended at the C-terminus in comparison to similar proteins, possible gene fusion; hypothetical protein 1150482 3095348 BPSS0857 Burkholderia pseudomallei K96243 hypothetical protein YP_110869.1 1149199 D 272560 CDS YP_110870.1 53721885 3096005 1151257..1152780 1 NC_006351.1 Similar to Pseudomonas aeruginosa A-type flagellar hook-associated protein 2 FliD SWALL:FLDA_PSEAE (SWALL:O33421) (478 aa) fasta scores: E(): 9e-23, 28.36% id in 483 aa, and to Pseudomonas aeruginosa B-type flagellar hook-associated protein 2 pa1094 SWALL:FLDB_PSEAE (SWALL:Q9K3C5) (474 aa) fasta scores: E(): 4.8e-22, 28.99% id in 469 aa. CDS is extended at the N-terminus in comparison to orthologues. Similar to BPSL3320, 58.300% identity (58.765% ungapped) in 506 aa overlap; flagellar hook-associated protein 1152780 3096005 BPSS0860 Burkholderia pseudomallei K96243 flagellar hook-associated protein YP_110870.1 1151257 D 272560 CDS YP_110871.1 53721886 3097176 complement(1153177..1154076) 1 NC_006351.1 Similar to Pseudomonas aeruginosa transcriptional regulator PtxR SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 3.5e-31, 36.98% id in 292 aa, and to Yersinia pestis LysR-family transcriptional regulatory protein ypo0799 SWALL:Q8ZHT5 (EMBL:AJ414144) (302 aa) fasta scores: E(): 1.4e-61, 54.2% id in 297 aa; LysR family transcriptional regulator 1154076 3097176 BPSS0861 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110871.1 1153177 R 272560 CDS YP_110872.1 53721887 3097177 1154166..1154864 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll3417 SWALL:Q98GA6 (EMBL:AP003001) (216 aa) fasta scores: E(): 3.3e-19, 38.86% id in 211 aa, and to Yersinia pestis hypothetical protein ypo0801 SWALL:Q8ZHT3 (EMBL:AJ414144) (211 aa) fasta scores: E(): 4.8e-10, 31.75% id in 211 aa; hypothetical protein 1154864 3097177 BPSS0862 Burkholderia pseudomallei K96243 hypothetical protein YP_110872.1 1154166 D 272560 CDS YP_110873.1 53721888 3096517 1155494..1156441 1 NC_006351.1 Similar to Xanthomonas axonopodis oxidoreductase xac0288 SWALL:AAM35180 (EMBL:AE011653) (323 aa) fasta scores: E(): 2e-70, 63.37% id in 314 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa3795 SWALL:Q9HXK2 (EMBL:AE004798) (316 aa) fasta scores: E(): 6.1e-70, 63.6% id in 316 aa; aldo/keto reductase 1156441 3096517 BPSS0864 Burkholderia pseudomallei K96243 aldo/keto reductase YP_110873.1 1155494 D 272560 CDS YP_110874.1 53721889 3096518 1156869..1157735 1 NC_006351.1 Similar to Klebsiella aerogenes MoaF protein precursor MoaF SWALL:MOAF_KLEAE (SWALL:P54796) (262 aa) fasta scores: E(): 6.4e-38, 46.83% id in 284 aa, and to Pseudomonas aeruginosa hypothetical protein pa4087 SWALL:Q9HWU1 (EMBL:AE004825) (274 aa) fasta scores: E(): 1.6e-39, 50% id in 282 aa; hypothetical protein 1157735 3096518 BPSS0865 Burkholderia pseudomallei K96243 hypothetical protein YP_110874.1 1156869 D 272560 CDS YP_110875.2 161723217 3096883 1157732..1158565 1 NC_006351.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1158565 3096883 BPSS0866 Burkholderia pseudomallei K96243 3-ketoacyl-ACP reductase YP_110875.2 1157732 D 272560 CDS YP_110876.1 53721891 3096754 1159092..1159799 1 NC_006351.1 Similar to Klebsiella aerogenes monoamine regulon transcriptional regulator MoaR SWALL:MOAR_KLEAE (SWALL:P54794) (227 aa) fasta scores: E(): 7.5e-08, 34.27% id in 213 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa4074 SWALL:Q9HWV4 (EMBL:AE004823) (222 aa) fasta scores: E(): 8.6e-26, 43.66% id in 213 aa; GerE family regulatory protein 1159799 3096754 BPSS0867 Burkholderia pseudomallei K96243 GerE family regulatory protein YP_110876.1 1159092 D 272560 CDS YP_110877.1 53721892 3095384 1160056..1161558 1 NC_006351.1 Similar to Escherichia coli phenylacetaldehyde dehydrogenase FeaB or PadA or MaoB SWALL:FEAB_ECOLI (SWALL:P80668) (499 aa) fasta scores: E(): 7.1e-100, 54.36% id in 493 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa4073 SWALL:Q9HWV5 (EMBL:AE004823) (495 aa) fasta scores: E(): 2.2e-114, 60.8% id in 495 aa. Similar to BPSL0051, 59.259% identity (59.504% ungapped) in 486 aa overlap; phenylacetaldehyde dehydrogenase 1161558 feaB 3095384 feaB Burkholderia pseudomallei K96243 phenylacetaldehyde dehydrogenase YP_110877.1 1160056 D 272560 CDS YP_110878.1 53721893 3096755 1161596..1162945 1 NC_006351.1 Similar to Brucella melitensis omega-amino acid-pyruvate aminotransferase bmeii0130 SWALL:Q8YDP5 (EMBL:AE009651) (452 aa) fasta scores: E(): 4.7e-88, 52.48% id in 442 aa, and to Rhizobium sp. probable aminotransferase Y4UB SWALL:Y4UB_RHISN (SWALL:Q53196) (467 aa) fasta scores: E(): 4e-59, 41.37% id in 435 aa; hypothetical protein 1162945 3096755 BPSS0869 Burkholderia pseudomallei K96243 hypothetical protein YP_110878.1 1161596 D 272560 CDS YP_110879.1 53721894 3095068 1163154..1164644 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable amino acid permease pa4072 SWALL:Q9HWV6 (EMBL:AE004823) (496 aa) fasta scores: E(): 2.4e-117, 69.51% id in 469 aa, and to Salmonella typhimurium amino acid transporter stm3126 SWALL:Q8ZM30 (EMBL:AE008843) (499 aa) fasta scores: E(): 2.2e-110, 63.51% id in 466 aa; amino acid permease 1164644 3095068 BPSS0870 Burkholderia pseudomallei K96243 amino acid permease YP_110879.1 1163154 D 272560 CDS YP_110880.1 53721895 3096974 1164641..1165261 1 NC_006351.1 Weakly similar to Pseudomonas aeruginosa hypothetical protein pa4071 SWALL:Q9HWV7 (EMBL:AE004823) (192 aa) fasta scores: E(): 2.4e-05, 29.94% id in 187 aa; hypothetical protein 1165261 3096974 BPSS0871 Burkholderia pseudomallei K96243 hypothetical protein YP_110880.1 1164641 D 272560 CDS YP_110881.1 53721896 3096975 1165258..1166277 1 NC_006351.1 Similar to Escherichia coli ethanolamine operon regulatory protein EutR SWALL:EUTR_ECOLI (SWALL:P36547) (350 aa) fasta scores: E(): 3.5e-29, 33.83% id in 334 aa, and to Salmonella typhimurium ethanolamine operon regulatory protein stm2454 SWALL:EUTR_SALTY (SWALL:Q9ZFU7) (350 aa) fasta scores: E(): 1.6e-27, 32.91% id in 322 aa; AraC family transcriptional regulator 1166277 3096975 BPSS0872 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_110881.1 1165258 D 272560 CDS YP_110882.1 53721897 3096602 1166507..1167709 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 6.8e-16, 30.84% id in 389 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 4.9e-35, 37.06% id in 402 aa; porin protein 1167709 3096602 BPSS0873 Burkholderia pseudomallei K96243 porin protein YP_110882.1 1166507 D 272560 CDS YP_110883.1 53721898 3096876 1167973..1168290 1 NC_006351.1 No significant database matches. Doubtful CDS; hypothetical protein 1168290 3096876 BPSS0874 Burkholderia pseudomallei K96243 hypothetical protein YP_110883.1 1167973 D 272560 CDS YP_110884.1 53721899 3096877 complement(1168399..1169010) 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri homoserine/homoserine lactone efflux protein RhtB SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 4.9e-09, 29.47% id in 190 aa, and to Rhizobium loti hypothetical protein mll4109 SWALL:Q98ES2 (EMBL:AP003003) (204 aa) fasta scores: E(): 1.1e-48, 63.54% id in 203 aa; LysE type translocator 1169010 3096877 BPSS0875 Burkholderia pseudomallei K96243 LysE type translocator YP_110884.1 1168399 R 272560 CDS YP_110885.1 53721900 3095180 1169182..1169661 1 NC_006351.1 Similar to Caulobacter crescentus acetyltransferase, GNAT family cc3261 SWALL:Q9A3E3 (EMBL:AE005989) (173 aa) fasta scores: E(): 2.6e-22, 50.63% id in 158 aa, and to Pseudomonas aeruginosa probable acetyltransferase pa2271 SWALL:Q9I1K2 (EMBL:AE004653) (171 aa) fasta scores: E(): 1.2e-06, 33.54% id in 161 aa; GNAT family acetyltransferase 1169661 3095180 BPSS0876 Burkholderia pseudomallei K96243 GNAT family acetyltransferase YP_110885.1 1169182 D 272560 CDS YP_110886.1 53721901 3097092 complement(1169802..1170863) 1 NC_006351.1 Similar to Escherichia coli N-ethylmaleimide reductase NemA SWALL:NEMA_ECOLI (SWALL:P77258) (365 aa) fasta scores: E(): 8.5e-57, 49.03% id in 363 aa, and to Pseudomonas aeruginosa xenobiotic reductase pa4356 SWALL:Q9HW45 (EMBL:AE004851) (350 aa) fasta scores: E(): 8.3e-94, 70.77% id in 349 aa; N-ethylmaleimide reductase 1170863 3097092 BPSS0877 Burkholderia pseudomallei K96243 N-ethylmaleimide reductase YP_110886.1 1169802 R 272560 CDS YP_110887.1 53721902 3097093 complement(1170913..1171218) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4354 SWALL:Q9HW47 (EMBL:AE004851) (100 aa) fasta scores: E(): 1.7e-20, 65.97% id in 97 aa, and to Rhizobium meliloti transcription regulator protein r01565 or smc01226 SWALL:Q92PZ8 (EMBL:AL591787) (96 aa) fasta scores: E(): 1e-17, 59.57% id in 94 aa; transcription regulator ArsR 1171218 3097093 BPSS0878 Burkholderia pseudomallei K96243 transcription regulator ArsR YP_110887.1 1170913 R 272560 CDS YP_110888.1 53721903 3096508 1172547..1173671 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1e-14, 31.85% id in 405 aa, and to Burkholderia cepacia major porin protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 3.5e-69, 76.45% id in 378 aa; porin protein 1173671 3096508 BPSS0879 Burkholderia pseudomallei K96243 porin protein YP_110888.1 1172547 D 272560 CDS YP_110889.1 53721904 3096884 complement(1173890..1174300) 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri regulator of nucleoside diphosphate kinase Rnk SWALL:RNK_ECOLI (SWALL:P40679) (136 aa) fasta scores: E(): 6.2e-12, 38.28% id in 128 aa, and to Ralstonia solanacearum regulator of nucleoside diphosphate kinase transcription regulator protein rsc2636 or rs04586 SWALL:Q8XW39 (EMBL:AL646071) (134 aa) fasta scores: E(): 1.1e-15, 44.36% id in 133 aa; transcription elongation factor 1174300 3096884 BPSS0880 Burkholderia pseudomallei K96243 transcription elongation factor YP_110889.1 1173890 R 272560 CDS YP_110890.1 53721905 3096885 1174807..1175148 1 NC_006351.1 No significant database matches. Similar to the C-terminal regions of BPSS1748, 50.538% identity (51.087% ungapped) in 93 aa overlap, and to BPSS0571, 50.000% identity (55.446% ungapped) in 112 aa overlap; hypothetical protein 1175148 3096885 BPSS0881 Burkholderia pseudomallei K96243 hypothetical protein YP_110890.1 1174807 D 272560 CDS YP_110891.1 53721906 3095478 complement(1175353..1175817) 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein xac3045 SWALL:AAM37890 (EMBL:AE011946) (142 aa) fasta scores: E(): 1.5e-22, 53.9% id in 141 aa, and to Xanthomonas campestris hypothetical protein xcc2862 SWALL:AAM42134 (EMBL:AE012399) (142 aa) fasta scores: E(): 1.8e-22, 54.61% id in 141 aa; hypothetical protein 1175817 3095478 BPSS0882 Burkholderia pseudomallei K96243 hypothetical protein YP_110891.1 1175353 R 272560 CDS YP_110892.1 53721907 3095954 1175994..1176647 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri GTP cyclohydrolase II RibA SWALL:GCH2_ECOLI (SWALL:P25523) (196 aa) fasta scores: E(): 1.2e-33, 52.66% id in 188 aa, and to the C-terminal region of Actinobacillus pleuropneumoniae riboflavin biosynthesis protein [includes: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase (dhbp synthase)] RibA SWALL:GCH2_ACTPL (SWALL:P50855) (401 aa) fasta scores: E(): 1e-33, 47.15% id in 193 aa. C-terminus is similar to the C-terminal region of BPSS1121, 54.088% identity (55.844% ungapped) in 159 aa overlap; GTP cyclohydrolase II 1176647 ribA 3095954 ribA Burkholderia pseudomallei K96243 GTP cyclohydrolase II YP_110892.1 1175994 D 272560 CDS YP_110893.1 53721908 3095910 complement(1176610..1177458) 1 NC_006351.1 hypothetical protein 1177458 3095910 BPSS0884 Burkholderia pseudomallei K96243 hypothetical protein YP_110893.1 1176610 R 272560 CDS YP_110894.1 53721909 3097087 complement(1177520..1178131) 1 NC_006351.1 Similar to Ralstonia solanacearum autoinducer synthesis protein SolI SWALL:SLI2_RALSO (SWALL:O30920) (204 aa) fasta scores: E(): 5.5e-51, 65.82% id in 199 aa, and to Burkholderia cepacia acyl homoserine lactone synthase CepI SWALL:Q9ZIU1 (EMBL:AF019654) (202 aa) fasta scores: E(): 6.6e-64, 76.84% id in 203 aa; N-acylhomoserine lactone synthase 1178131 pmlI 3097087 pmlI Burkholderia pseudomallei K96243 N-acylhomoserine lactone synthase YP_110894.1 1177520 R 272560 CDS YP_110895.1 53721910 3095911 complement(1178356..1178799) 1 NC_006351.1 Poor database matches. Weakly similar to the N-terminal region of Rhizobium meliloti hypothetical protein rb0634 or smb21055 SWALL:Q92VR5 (EMBL:AL603644) (194 aa) fasta scores: E(): 1.3, 31.34% id in 134 aa; hypothetical protein 1178799 3095911 BPSS0886 Burkholderia pseudomallei K96243 hypothetical protein YP_110895.1 1178356 R 272560 CDS YP_110896.1 53721911 3095551 1178873..1179592 1 NC_006351.1 Similar to Ralstonia solanacearum transcriptional activator protein SolR SWALL:SLR2_RALSO (SWALL:O30919) (236 aa) fasta scores: E(): 2.2e-66, 67.79% id in 236 aa, and to Burkholderia cepacia transcriptional activator CepR SWALL:Q9ZIU0 (EMBL:AF019654) (239 aa) fasta scores: E(): 2.7e-81, 79.91% id in 239 aa; N-acylhomoserine lactone dependent regulatory protein 1179592 pmlR 3095551 pmlR Burkholderia pseudomallei K96243 N-acylhomoserine lactone dependent regulatory protein YP_110896.1 1178873 D 272560 CDS YP_110897.1 53721912 3095386 complement(1179628..1180344) 1 NC_006351.1 Similar to Salmonella typhimurium Mg(2+) transport ATPase C MgtC SWALL:ATMC_SALTY (SWALL:P22037) (231 aa) fasta scores: E(): 2e-26, 41.92% id in 229 aa, and to Pseudomonas aeruginosa hypothetical protein pa4635 SWALL:Q9HVF6 (EMBL:AE004878) (234 aa) fasta scores: E(): 1.7e-34, 47.23% id in 235 aa; MgtC family protein 1180344 3095386 BPSS0888 Burkholderia pseudomallei K96243 MgtC family protein YP_110897.1 1179628 R 272560 CDS YP_110898.1 53721913 3096981 complement(1181017..1182222) 1 NC_006351.1 Similar to Helicobacter pylori J99 hypothetical protein JHP0380 SWALL:YA44_HELPJ (SWALL:Q9ZM43) (370 aa) fasta scores: E(): 3.4e-24, 31.86% id in 386 aa, and to Campylobacter jejuni hypothetical protein CJ0846 SWALL:Y846_CAMJE (SWALL:Q9PP77) (374 aa) fasta scores: E(): 2.7e-23, 32.22% id in 391 aa; calcineurin-like phosphoesterase 1182222 3096981 BPSS0889 Burkholderia pseudomallei K96243 calcineurin-like phosphoesterase YP_110898.1 1181017 R 272560 CDS YP_110899.1 53721914 3096982 complement(1182285..1182869) 1 NC_006351.1 Similar to Xanthomonas axonopodis NADH dehydrogenase/NAD(P)H nitroreductase xac0554 SWALL:AAM35443 (EMBL:AE011683) (198 aa) fasta scores: E(): 1.2e-53, 74.24% id in 198 aa, and to Xanthomonas campestris NADH dehydrogenase/NAD(P)H nitroreductase xcc3605 SWALL:AAM42875 (EMBL:AE012481) (196 aa) fasta scores: E(): 1.8e-53, 74.34% id in 191 aa; hypothetical protein 1182869 3096982 BPSS0890 Burkholderia pseudomallei K96243 hypothetical protein YP_110899.1 1182285 R 272560 CDS YP_110900.1 53721915 3096643 1183002..1183628 1 NC_006351.1 Similar to Escherichia coli alkylated DNA repair protein AlkB or AidD SWALL:ALKB_ECOLI (SWALL:P05050) (216 aa) fasta scores: E(): 0.15, 30.18% id in 222 aa, and to Pseudomonas aeruginosa hypothetical protein pa3306 SWALL:Q9HYT8 (EMBL:AE004753) (200 aa) fasta scores: E(): 1.2e-33, 50.75% id in 199 aa; 2OG-Fe(II) oxygenase 1183628 3096643 BPSS0891 Burkholderia pseudomallei K96243 2OG-Fe(II) oxygenase YP_110900.1 1183002 D 272560 CDS YP_110901.1 53721916 3096969 1183715..1184665 1 NC_006351.1 Similar to Pseudomonas putida Pca regulon regulatory protein PcaR SWALL:PCAR_PSEPU (SWALL:Q52154) (291 aa) fasta scores: E(): 4.9e-15, 26.25% id in 278 aa. C-terminal region is similar to Pseudomonas aeruginosa probable transcriptional regulator pa3508 SWALL:Q9HYA1 (EMBL:AE004771) (277 aa) fasta scores: E(): 1.2e-41, 49.09% id in 275 aa. Similar to BPSS0900, 64.184% identity (65.108% ungapped) in 282 aa overlap; IclR family transcriptional regulator 1184665 3096969 BPSS0892 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_110901.1 1183715 D 272560 CDS YP_110902.1 53721917 3096970 complement(1184982..1186070) 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.5e-13, 33.16% id in 401 aa, and to Ralstonia solanacearum probable porin transmembrane protein rsc1082 or rs04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 1e-29, 36.95% id in 368 aa; porin 1186070 3096970 BPSS0893 Burkholderia pseudomallei K96243 porin YP_110902.1 1184982 R 272560 CDS YP_110903.1 53721918 3094948 1186505..1186822 1 NC_006351.1 Similar to Pseudomonas aeruginosa naphthalene 1,2-dioxygenase system ferredoxin component NdoA or paha2 SWALL:NDOA_PSEAE (SWALL:Q51493) (103 aa) fasta scores: E(): 2.3e-09, 33.98% id in 103 aa, and to Acinetobacter sp. ADP1 hypothetical protein SWALL:O24846 (EMBL:AF009672) (101 aa) fasta scores: E(): 1.6e-17, 49% id in 100 aa; Rieske (2Fe-2S) domain-containing protein 1186822 3094948 BPSS0894 Burkholderia pseudomallei K96243 Rieske (2Fe-2S) domain-containing protein YP_110903.1 1186505 D 272560 CDS YP_110904.1 53721919 3096494 1186824..1187135 1 NC_006351.1 No significant database matches to the full length CDS. C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa3501 SWALL:Q9HYA8 (EMBL:AE004770) (72 aa) fasta scores: E(): 0.0026, 36.06% id in 61 aa. Possible alternative translational start site; hypothetical protein 1187135 3096494 BPSS0895 Burkholderia pseudomallei K96243 hypothetical protein YP_110904.1 1186824 D 272560 CDS YP_110905.1 53721920 3096495 1187170..1188237 1 NC_006351.1 Similar to Pseudomonas sp. vanillate O-demethylase oxygenase subunit VanA SWALL:VANA_PSESP (SWALL:O05616) (354 aa) fasta scores: E(): 4e-18, 30.44% id in 358 aa, and to Acinetobacter sp. ADP1 hypothetical protein SWALL:O24847 (EMBL:AF009672) (316 aa) fasta scores: E(): 2.1e-88, 62.97% id in 316 aa; Rieske (2Fe-2S) domain-containing protein 1188237 3096495 BPSS0896 Burkholderia pseudomallei K96243 Rieske (2Fe-2S) domain-containing protein YP_110905.1 1187170 D 272560 CDS YP_110906.1 53721921 3096583 1188246..1189004 1 NC_006351.1 member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase 1189004 3096583 BPSS0897 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_110906.1 1188246 D 272560 CDS YP_110907.1 53721922 3096296 1189028..1189570 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3510 SWALL:Q9HY99 (EMBL:AE004771) (176 aa) fasta scores: E(): 5.9e-50, 71.25% id in 167 aa, and to Rhodococcus sp. hypothetical protein SWALL:BAC00796 (EMBL:AB070454) (171 aa) fasta scores: E(): 1.2e-24, 49.36% id in 158 aa; hypothetical protein 1189570 3096296 BPSS0898 Burkholderia pseudomallei K96243 hypothetical protein YP_110907.1 1189028 D 272560 CDS YP_110908.1 53721923 3096297 1189587..1190498 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable hydrolase pa3509 SWALL:Q9HYA0 (EMBL:AE004771) (289 aa) fasta scores: E(): 6e-33, 44.76% id in 277 aa, and to Agrobacterium tumefaciens hydrolase ATU4238 or AGR_L_1247 SWALL:Q8U861 (EMBL:AE009353) (286 aa) fasta scores: E(): 1.9e-10, 29.89% id in 291 aa; hydrolase 1190498 3096297 BPSS0899 Burkholderia pseudomallei K96243 hydrolase YP_110908.1 1189587 D 272560 CDS YP_110909.1 53721924 3095918 1190495..1191349 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3508 SWALL:Q9HYA1 (EMBL:AE004771) (277 aa) fasta scores: E(): 6.5e-43, 49.62% id in 268 aa, and weakly similar to Pseudomonas putida Pca regulon regulatory protein PcaR SWALL:PCAR_PSEPU (SWALL:Q52154) (291 aa) fasta scores: E(): 1.4e-12, 26.37% id in 254 aa. Similar to BPSS0892, 64.184% identity (65.108% ungapped) in 282 aa overlap; IclR family transcriptional regulator 1191349 3095918 BPSS0900 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_110909.1 1190495 D 272560 CDS YP_110910.1 53721925 3095315 1191346..1192143 1 NC_006351.1 Similar to Streptomyces cinnamonensis monensin polyketide synthase ketoacyl reductase SWALL:DHKR_STRCM (SWALL:P41177) (261 aa) fasta scores: E(): 8.2e-19, 34.88% id in 258 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase pa3507 SWALL:Q9HYA2 (EMBL:AE004771) (265 aa) fasta scores: E(): 2.4e-60, 61.74% id in 264 aa; short chain dehydrogenase 1192143 3095315 BPSS0901 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_110910.1 1191346 D 272560 CDS YP_110911.1 53721926 3095316 1192136..1193809 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable decarboxylase pa3506 SWALL:Q9HYA3 (EMBL:AE004771) (560 aa) fasta scores: E(): 1.8e-134, 66.13% id in 561 aa. Weakly similar to Escherichia coli acetolactate synthase isozyme I large subunit IlvB SWALL:ILVB_ECOLI (SWALL:P08142) (562 aa) fasta scores: E(): 1.8e-32, 28.57% id in 532 aa; hypothetical protein 1193809 3095316 BPSS0902 Burkholderia pseudomallei K96243 hypothetical protein YP_110911.1 1192136 D 272560 CDS YP_110912.1 53721927 3096271 1193802..1194617 1 NC_006351.1 catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase 1194617 3096271 BPSS0903 Burkholderia pseudomallei K96243 L-aspartate dehydrogenase YP_110912.1 1193802 D 272560 CDS YP_110913.1 53721928 3094986 1194643..1196133 1 NC_006351.1 Similar to Bacillus subtilis betaine aldehyde dehydrogenase GbsA SWALL:DHAB_BACSU (SWALL:P71016) (490 aa) fasta scores: E(): 6.7e-69, 39.13% id in 488 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa3504 SWALL:Q9HYA5 (EMBL:AE004771) (494 aa) fasta scores: E(): 1.3e-129, 67.21% id in 488 aa; aldehyde dehydrogenase 1196133 3094986 BPSS0904 Burkholderia pseudomallei K96243 aldehyde dehydrogenase YP_110913.1 1194643 D 272560 CDS YP_110914.1 53721929 3094987 1196150..1197115 1 NC_006351.1 C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein pa3503 SWALL:Q9HYA6 (EMBL:AE004770) (211 aa) fasta scores: E(): 1.1e-60, 67.3% id in 208 aa. Full length CDS is weakly similar to Pseudomonas aeruginosa dioxygenase SWALL:O87625 (EMBL:AF087482) (309 aa) fasta scores: E(): 8.8e-13, 28.28% id in 297 aa. N-terminus is weakly similar to the N-terminal region of Rhodococcus rhodochrous metapyrocatechase CatA SWALL:CATA_RHORH (SWALL:Q53034) (318 aa) fasta scores: E(): 9.8e-05, 27.79% id in 277 aa; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1197115 3094987 BPSS0905 Burkholderia pseudomallei K96243 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_110914.1 1196150 D 272560 CDS YP_110915.1 53721930 3097198 1197141..1198355 1 NC_006351.1 Similar to Escherichia coli 3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component HcaD or PhdA or HcaA4 SWALL:HCAD_ECOLI (SWALL:P77650) (400 aa) fasta scores: E(): 1.8e-43, 38.76% id in 405 aa, and to Rhizobium loti ferredoxin reductase MLR5000 SWALL:Q98CU3 (EMBL:AP003005) (412 aa) fasta scores: E(): 8.1e-52, 44.87% id in 390 aa; pyridine nucleotide-disulfide oxidoreductase 1198355 3097198 BPSS0906 Burkholderia pseudomallei K96243 pyridine nucleotide-disulfide oxidoreductase YP_110915.1 1197141 D 272560 CDS YP_110916.1 53721931 3096653 1198390..1199796 1 NC_006351.1 Similar to Acinetobacter calcoaceticus benzoate transport protein BenK SWALL:BENK_ACICA (SWALL:O30513) (466 aa) fasta scores: E(): 1.5e-22, 25.64% id in 429 aa, and to Agrobacterium tumefaciens MFS permease ATU5395 or AGR_PAT_571 SWALL:Q8UJT0 (EMBL:AE008961) (461 aa) fasta scores: E(): 5.3e-58, 37.5% id in 456 aa. CDS is extended at the N-terminus in comparison to some orthologues; transport protein 1199796 3096653 BPSS0907 Burkholderia pseudomallei K96243 transport protein YP_110916.1 1198390 D 272560 CDS YP_110917.1 53721932 3096654 1200501..1202816 1 NC_006351.1 C-terminal region is similar to the C-terminal region of Bradyrhizobium japonicum Blr5538 protein blr5538 SWALL:BAC50803 (EMBL:AP005955) (762 aa) fasta scores: E(): 3e-36, 32.9% id in 708 aa. Similar to an internal region of Xanthomonas axonopodis outer membrane protein xac3546 SWALL:Q8PGS0 (EMBL:AE012003) (2190 aa) fasta scores: E(): 2.3e-31, 32.42% id in 885 aa; surface-exposed protein 1202816 3096654 BPSS0908 Burkholderia pseudomallei K96243 surface-exposed protein YP_110917.1 1200501 D 272560 CDS YP_110918.1 53721933 3095347 1202875..1203705 1 NC_006351.1 C-terminus is similar to the C-terminal region of Escherichia coli outer membrane protein A precursor OmpA or TolG or Tut or Con SWALL:OMPA_ECOLI (SWALL:P02934) (346 aa) fasta scores: E(): 9.7e-16, 41.5% id in 159 aa. Full length CDS is similar to Haemophilus somnus antigen SWALL:Q48292 (EMBL:L07795) (273 aa) fasta scores: E(): 2e-10, 32.49% id in 277 aa; OmpA family protein 1203705 3095347 BPSS0909 Burkholderia pseudomallei K96243 OmpA family protein YP_110918.1 1202875 D 272560 CDS YP_110919.1 53721934 3095039 complement(1203866..1204300) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella typhi protein nucleotide-binding protein stm0614 or sty0662 SWALL:Q8XGB9 (EMBL:AE008724) (142 aa) fasta scores: E(): 0.19, 28.16% id in 142 aa, and to Methanobacterium thermoautotrophicum conserved protein mth898 SWALL:O26984 (EMBL:AE000865) (149 aa) fasta scores: E(): 0.26, 29.16% id in 144 aa; hypothetical protein 1204300 3095039 BPSS0910 Burkholderia pseudomallei K96243 hypothetical protein YP_110919.1 1203866 R 272560 CDS YP_110920.1 53721935 3095040 1204825..1206318 1 NC_006351.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1206318 3095040 BPSS0911 Burkholderia pseudomallei K96243 amidase YP_110920.1 1204825 D 272560 CDS YP_110921.1 53721936 3094914 complement(1206483..1206965) 1 NC_006351.1 Similar to Salmonella typhimurium, and Klebsiella aerogenes leucine-responsive regulatory protein Lrp SWALL:LRP_SALTY (SWALL:P37403) (163 aa) fasta scores: E(): 4.8e-17, 37.83% id in 148 aa, and to Pseudomonas putida Lrp-family transcriptional regulators MdeR SWALL:O33467 (EMBL:D89015) (159 aa) fasta scores: E(): 5.2e-28, 46.45% id in 155 aa; transcription regulator AsnC 1206965 3094914 BPSS0912 Burkholderia pseudomallei K96243 transcription regulator AsnC YP_110921.1 1206483 R 272560 CDS YP_110922.1 53721937 3096921 1207153..1208454 1 NC_006351.1 catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; methionine gamma-lyase 1208454 3096921 BPSS0913 Burkholderia pseudomallei K96243 methionine gamma-lyase YP_110922.1 1207153 D 272560 CDS YP_110923.1 53721938 3096922 complement(1208622..1208846) 1 NC_006351.1 hypothetical protein 1208846 3096922 BPSS0914 Burkholderia pseudomallei K96243 hypothetical protein YP_110923.1 1208622 R 272560 CDS YP_110924.1 53721939 3096282 1209283..1209984 1 NC_006351.1 hypothetical protein 1209984 3096282 BPSS0915 Burkholderia pseudomallei K96243 hypothetical protein YP_110924.1 1209283 D 272560 CDS YP_110925.1 53721940 3095584 1210101..1210973 1 NC_006351.1 Similar to Salmonella typhimurium N-hydroxyarylamine O-acetyltransferase NhoA SWALL:NHOA_SALTY (SWALL:Q00267) (281 aa) fasta scores: E(): 3e-28, 35.05% id in 271 aa, and to Rhizobium loti arylamine N-acetyltransferase mlr4870 SWALL:Q98D42 (EMBL:AP003005) (278 aa) fasta scores: E(): 4.7e-39, 43.11% id in 276 aa; N-hydroxyarylamine O-acetyltransferase 1210973 3095584 BPSS0916 Burkholderia pseudomallei K96243 N-hydroxyarylamine O-acetyltransferase YP_110925.1 1210101 D 272560 CDS YP_110926.1 53721941 3095585 1211259..1211816 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical protein r02764 or smc03980 SWALL:Q92M80 (EMBL:AL591791) (196 aa) fasta scores: E(): 3e-26, 44.08% id in 186 aa, and to Agrobacterium tumefaciens hypothetical protein atu5439 SWALL:Q8UJN7 (EMBL:AE008964) (195 aa) fasta scores: E(): 7e-24, 44.08% id in 186 aa; hypothetical protein 1211816 3095585 BPSS0917 Burkholderia pseudomallei K96243 hypothetical protein YP_110926.1 1211259 D 272560 CDS YP_110927.1 53721942 3095408 complement(1211936..1212397) 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein ATU0237 or AGR_C_402 SWALL:Q8UIQ6 (EMBL:AE008996) (152 aa) fasta scores: E(): 2.8e-28, 55.55% id in 153 aa, and to Rhizobium meliloti hypothetical protein r00359 or smc01160 SWALL:Q92SL2 (EMBL:AL591783) (152 aa) fasta scores: E(): 5.4e-25, 54% id in 150 aa; DNA-binding protein 1212397 3095408 BPSS0918 Burkholderia pseudomallei K96243 DNA-binding protein YP_110927.1 1211936 R 272560 CDS YP_110928.1 53721943 3096911 1212527..1213438 1 NC_006351.1 Similar to Agrobacterium tumefaciens oxidoreductase ATU0238 or AGR_C_405 SWALL:Q8UIQ5 (EMBL:AE008996) (297 aa) fasta scores: E(): 3e-50, 50.16% id in 297 aa, and to the C-terminal region of Bacillus sp. NADH dehydrogenase AhpF or Ndh SWALL:DHNA_BACSP (SWALL:P26829) (519 aa) fasta scores: E(): 4.9e-07, 25.08% id in 311 aa; hypothetical protein 1213438 3096911 BPSS0919 Burkholderia pseudomallei K96243 hypothetical protein YP_110928.1 1212527 D 272560 CDS YP_110929.1 53721944 3095379 complement(1214231..1215166) 1 NC_006351.1 Similar to Escherichia coli cyn operon transcriptional activator CynR SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 5.6e-17, 31.29% id in 262 aa, and to Rhizobium leguminosarum similarity to members of the LysR family SWALL:Q52868 (EMBL:U39409) (300 aa) fasta scores: E(): 1.4e-24, 31.37% id in 290 aa; LysR family transcriptional regulator 1215166 3095379 BPSS0920 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110929.1 1214231 R 272560 CDS YP_110930.1 53721945 3096860 1215284..1216702 1 NC_006351.1 Similar to Bradyrhizobium japonicum BLL7601 protein SWALL:BAC52866 (EMBL:AP005962) (461 aa) fasta scores: E(): 5.8e-106, 56.36% id in 456 aa, and to Streptomyces coelicolor peptidase SCO5185 or 2SC3B6.09 SWALL:Q9FCK3 (EMBL:AL939122) (470 aa) fasta scores: E(): 7.6e-26, 30.1% id in 475 aa; hypothetical protein 1216702 3096860 BPSS0921 Burkholderia pseudomallei K96243 hypothetical protein YP_110930.1 1215284 D 272560 CDS YP_110931.1 53721946 3096861 1216729..1218006 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella typhi citrate-proton symporter CitA SWALL:CIT1_SALTY (SWALL:P24115) (434 aa) fasta scores: E(): 6.4e-49, 35.28% id in 411 aa, and to Pseudomonas aeruginosa probable MFS transporter pa4343 SWALL:Q9HW58 (EMBL:AE004850) (439 aa) fasta scores: E(): 1.2e-57, 40.52% id in 417 aa; transporter protein 1218006 3096861 BPSS0922 Burkholderia pseudomallei K96243 transporter protein YP_110931.1 1216729 D 272560 CDS YP_110932.1 53721947 3096988 complement(1218570..1219523) 1 NC_006351.1 Similar to Mycobacterium tuberculosis probable oxidoreductase EphD or rv2214c or mt2270 or mtcy190.25c SWALL:EPHD_MYCTU (SWALL:Q10402) (592 aa) fasta scores: E(): 4.8e-17, 34.36% id in 323 aa. N-terminus is similar to the N-terminal region of Pseudomonas aeruginosa probable short-chain dehydrogenase pa3324 SWALL:Q9HYS1 (EMBL:AE004754) (592 aa) fasta scores: E(): 9e-27, 48.79% id in 291 aa; hydrolase 1219523 3096988 BPSS0923 Burkholderia pseudomallei K96243 hydrolase YP_110932.1 1218570 R 272560 CDS YP_110933.1 53721948 3096634 complement(1219535..1220449) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1542 SWALL:Q9I3H1 (EMBL:AE004582) (278 aa) fasta scores: E(): 2.4e-34, 43.46% id in 260 aa, and to Pseudomonas aeruginosa hypothetical protein pa0830 SWALL:Q9I5A9 (EMBL:AE004517) (277 aa) fasta scores: E(): 2.3e-33, 41.72% id in 266 aa. Similar to BPSS1914, 68.942% identity (69.896% ungapped) in 293 aa overlap, and to BPSS1822, 61.938% identity (63.028% ungapped) in 289 aa overlap, and to BPSS0849, 58.503% identity (59.930% ungapped) in 294 aa overlap; hypothetical protein 1220449 3096634 BPSS0924 Burkholderia pseudomallei K96243 hypothetical protein YP_110933.1 1219535 R 272560 CDS YP_110934.1 53721949 3096635 complement(1220446..1221372) 1 NC_006351.1 Similar to Pseudomonas paucimobilis C alpha-dehydrogenase LigD SWALL:LIGD_PSEPA (SWALL:Q01198) (305 aa) fasta scores: E(): 4.2e-16, 30.13% id in 292 aa. Previously sequenced as Burkholderia pseudomallei hypothetical protein LPW137-138 SWALL:Q9APG2 (EMBL:AF298896) (308 aa) fasta scores: E(): 5.5e-117, 100% id in 308 aa. Similar to BPSS1968, 53.378% identity (54.110% ungapped) in 296 aa overlap; short chain dehydrogenase 1221372 3096635 BPSS0925 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_110934.1 1220446 R 272560 CDS YP_110935.1 53721950 3095310 complement(1221400..1222989) 1 NC_006351.1 Similar to Pseudomonas fluorescens flavin-binding monooxygenase SWALL:O87636 (EMBL:AF090329) (512 aa) fasta scores: E(): 3.7e-142, 63.7% id in 507 aa, and weakly similar to Acinetobacter sp cyclohexanone monooxygenase SWALL:CYMO_ACISP (SWALL:P12015) (542 aa) fasta scores: E(): 2.2e-23, 28.17% id in 504 aa; flavin-binding monooxygenase-like protein 1222989 3095310 BPSS0926 Burkholderia pseudomallei K96243 flavin-binding monooxygenase-like protein YP_110935.1 1221400 R 272560 CDS YP_110936.1 53721951 3095052 complement(1223235..1223885) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc3353 or rs02628 SWALL:Q8XU41 (EMBL:AL646074) (253 aa) fasta scores: E(): 2.4e-20, 41.96% id in 224 aa, and to Rhizobium loti hypothetical protein mll3549 SWALL:Q98G00 (EMBL:AP003002) (224 aa) fasta scores: E(): 1.1e-07, 35.18% id in 216 aa; hypothetical protein 1223885 3095052 BPSS0927 Burkholderia pseudomallei K96243 hypothetical protein YP_110936.1 1223235 R 272560 CDS YP_110937.1 53721952 3095053 complement(1224086..1225069) 1 NC_006351.1 Similar to Escherichia coli aliphatic sulfonates binding protein precursor SsuA SWALL:SSUA_ECOLI (SWALL:P75853) (319 aa) fasta scores: E(): 3.5e-46, 43.97% id in 307 aa, and to Ralstonia solanacearum alkanesulfonates binding protein precursor rsp1383 or rs02075 SWALL:Q8XQA3 (EMBL:AL646084) (334 aa) fasta scores: E(): 2.2e-74, 61.46% id in 327 aa. Similar to BPSL1252, 50.485% identity (50.980% ungapped) in 309 aa overlap; aliphatic sulfonates binding protein precursor 1225069 3095053 BPSS0928 Burkholderia pseudomallei K96243 aliphatic sulfonates binding protein precursor YP_110937.1 1224086 R 272560 CDS YP_110938.1 53721953 3095715 complement(1225194..1226000) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsc3080 or rs00531 SWALL:Q8XUV3 (EMBL:AL646073) (256 aa) fasta scores: E(): 5.6e-48, 56.66% id in 240 aa, and to Streptomyces coelicolor MerR-family transcriptional regulator SCO3173 or SCE87.24 SWALL:Q9RKB4 (EMBL:AL939115) (215 aa) fasta scores: E(): 3.2e-19, 39.46% id in 223 aa; hypothetical protein 1226000 3095715 BPSS0929 Burkholderia pseudomallei K96243 hypothetical protein YP_110938.1 1225194 R 272560 CDS YP_110939.1 53721954 3097010 complement(1226079..1226645) 1 NC_006351.1 Similar to Alcaligenes faecalis phosphinothricin N-acetyltransferase Pat SWALL:PAT_ALCFA (SWALL:P31668) (197 aa) fasta scores: E(): 8.3e-36, 59.76% id in 169 aa, and to Streptomyces hygroscopicus phosphinothricin N-acetyltransferase Bar SWALL:PAT_STRHY (SWALL:P16426) (183 aa) fasta scores: E(): 2.8e-16, 38.85% id in 175 aa; phosphinothricin N-acetyltransferase 1226645 3097010 BPSS0930 Burkholderia pseudomallei K96243 phosphinothricin N-acetyltransferase YP_110939.1 1226079 R 272560 CDS YP_110940.1 53721955 3097011 1227374..1228171 1 NC_006351.1 Poor database matches. Weakly similar to the C-terminal region of Heterodoxus macropus NADH dehydrogenase subunit 2 Nad2 SWALL:Q9B8G3 (EMBL:AF270939) (298 aa) fasta scores: E(): 2.1, 25.24% id in 202 aa; hypothetical protein 1228171 3097011 BPSS0931 Burkholderia pseudomallei K96243 hypothetical protein YP_110940.1 1227374 D 272560 CDS YP_110941.1 53721956 3095364 complement(1228206..1229720) 1 NC_006351.1 Similar to the C-terminal regions of Streptomyces coelicolor integral membrane transport protein SCO2344 or SCC8A.02c SWALL:Q9KY46 (EMBL:AL939112) (689 aa) fasta scores: E(): 5.7e-93, 52.89% id in 501 aa, and to Streptomyces coelicolor exporter SCO3366 or SCE94.17c SWALL:Q9X8M3 (EMBL:AL939116) (531 aa) fasta scores: E(): 1.6e-85, 46.42% id in 504 aa; membrane transport protein 1229720 3095364 BPSS0932 Burkholderia pseudomallei K96243 membrane transport protein YP_110941.1 1228206 R 272560 CDS YP_110942.1 53721957 3097215 1229959..1231515 1 NC_006351.1 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 4.2e-61, 44.29% id in 526 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis transmembrane protein rsp0303 or rs05471 SWALL:Q8XT14 (EMBL:AL646077) (515 aa) fasta scores: E(): 1.3e-76, 50.78% id in 512 aa. CDS is truncated at the C-terminus in comparison to some orthologues. Similar to N-terminal region of BPSL1829, 51.908% identity (52.510% ungapped) in 524 aa overlap; methyl-accepting chemotaxis protein 1231515 3097215 BPSS0933 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_110942.1 1229959 D 272560 CDS YP_110943.1 53721958 3097216 complement(1231748..1233412) 1 NC_006351.1 hypothetical protein 1233412 3097216 BPSS0934 Burkholderia pseudomallei K96243 hypothetical protein YP_110943.1 1231748 R 272560 CDS YP_110944.1 53721959 3096206 complement(1234055..1234963) 1 NC_006351.1 Poor database matches. C-terminus is weakly similar to the N-terminal region of Bradyrhizobium japonicum transcriptional regulatory protein FixJ SWALL:FIXJ_BRAJA (SWALL:P23221) (205 aa) fasta scores: E(): 0.02, 29.26% id in 123 aa; hypothetical protein 1234963 3096206 BPSS0935 Burkholderia pseudomallei K96243 hypothetical protein YP_110944.1 1234055 R 272560 CDS YP_110945.1 53721960 3094952 1235142..1236470 1 NC_006351.1 Similar to Rhizobium meliloti amino acid deaminase transmembrane protein r02931 or smc03200 SWALL:Q92LU0 (EMBL:AL591792) (445 aa) fasta scores: E(): 5.5e-50, 37.41% id in 441 aa, and to Corynebacterium sp. sarcosine oxidase beta subunit SoxB SWALL:SOXB_CORS1 (SWALL:P40875) (405 aa) fasta scores: E(): 1.8e-10, 25.33% id in 446 aa; hypothetical protein 1236470 3094952 BPSS0936 Burkholderia pseudomallei K96243 hypothetical protein YP_110945.1 1235142 D 272560 CDS YP_110946.1 53721961 3094953 1236747..1237856 1 NC_006351.1 Similar to Streptomyces coelicolor membrane protein SCO3826 or SCGD3.27c SWALL:Q9XA52 (EMBL:AL939117) (365 aa) fasta scores: E(): 7.7e-32, 33.43% id in 344 aa, and to Mycobacterium tuberculosis hypothetical protein rv3200c or mtv014.44c or mt3294 SWALL:O53346 (EMBL:AL021646) (355 aa) fasta scores: E(): 1.7e-31, 33.12% id in 320 aa; hypothetical protein 1237856 3094953 BPSS0937 Burkholderia pseudomallei K96243 hypothetical protein YP_110946.1 1236747 D 272560 CDS YP_110947.1 53721962 3096697 complement(1237920..1238810) 1 NC_006351.1 Similar to Streptomyces coelicolor epoxide hydrolase SCOo6277 or SC1G7.03 SWALL:Q93S12 (EMBL:AL939127) (286 aa) fasta scores: E(): 1.5e-35, 40.82% id in 267 aa. Weakly similar to Glycine max epoxide hydrolase SWALL:O49857 (EMBL:X78548) (341 aa) fasta scores: E(): 3.6e-12, 28% id in 275 aa; hypothetical protein 1238810 3096697 BPSS0938 Burkholderia pseudomallei K96243 hypothetical protein YP_110947.1 1237920 R 272560 CDS YP_110948.1 53721963 3097273 1239185..1239583 1 NC_006351.1 Similar to Acinetobacter calcoaceticus 4-carboxymuconolactone decarboxylase PcaC SWALL:DC4C_ACICA (SWALL:P20370) (134 aa) fasta scores: E(): 6.5e-15, 40.47% id in 126 aa, and to Pseudomonas aeruginosa hypothetical protein pa4486 SWALL:Q9HVT5 (EMBL:AE004862) (128 aa) fasta scores: E(): 1.5e-24, 59.2% id in 125 aa; carboxymuconolactone decarboxylase 1239583 3097273 BPSS0939 Burkholderia pseudomallei K96243 carboxymuconolactone decarboxylase YP_110948.1 1239185 D 272560 CDS YP_110949.1 53721964 3097274 1240463..1241416 1 NC_006351.1 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 1241416 3097274 BPSS0940 Burkholderia pseudomallei K96243 ornithine cyclodeaminase YP_110949.1 1240463 D 272560 CDS YP_110950.1 53721965 3095179 complement(1241388..1242260) 1 NC_006351.1 Similar to Agrobacterium tumefaciens esterase/lipase ATU2002 or AGR_C_3637 SWALL:Q8UDW6 (EMBL:AE009152) (322 aa) fasta scores: E(): 6.1e-17, 33.11% id in 305 aa. C-terminal region is weakly similar to Caldocellum saccharolyticum acetyl esterase XynC SWALL:XYNC_CALSA (SWALL:P23553) (266 aa) fasta scores: E(): 5.6e-11, 26.39% id in 269 aa. Possible alternative translational start site; hypothetical protein 1242260 3095179 BPSS0941 Burkholderia pseudomallei K96243 hypothetical protein YP_110950.1 1241388 R 272560 CDS YP_110951.1 53721966 3096029 complement(1242298..1243464) 1 NC_006351.1 Similar to Rhodobacter sphaeroides OpgC SWALL:Q9FA51 (EMBL:AF016298) (399 aa) fasta scores: E(): 1.1e-15, 30.33% id in 389 aa, and to Rhizobium meliloti hypothetical transmembrane protein smc04381 r03285 or smc04381 SWALL:Q92L11 (EMBL:AL591793) (385 aa) fasta scores: E(): 7.2e-18, 29.28% id in 362 aa. N-terminal region is similar to the C-termial region of BPSS2162, 50.992% identity (52.023% ungapped) in 353 aa overlap; hypothetical protein 1243464 3096029 BPSS0942 Burkholderia pseudomallei K96243 hypothetical protein YP_110951.1 1242298 R 272560 CDS YP_110952.1 53721967 3096030 1243885..1245039 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.8e-19, 34.21% id in 377 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 2.1e-87, 60.1% id in 386 aa. Similar to BPSL2559, 53.197% identity (55.914% ungapped) in 391 aa overlap, and to BPSL3036, 50.370% identity (55.890% ungapped) in 405 aa overlap, and to BPSS0757, 50.382% identity (55.000% ungapped) in 393 aa overlap; porin protein 1245039 3096030 BPSS0943 Burkholderia pseudomallei K96243 porin protein YP_110952.1 1243885 D 272560 CDS YP_110953.1 53721968 3096786 complement(1245541..1246452) 1 NC_006351.1 Similar to Chromatium vinosum rubisco operon transcriptional regulator RbcR SWALL:RBCR_CHRVI (SWALL:P25544) (302 aa) fasta scores: E(): 2.5e-13, 24.54% id in 273 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1267 or rs05312 SWALL:Q8XQG0 (EMBL:AL646083) (294 aa) fasta scores: E(): 3.8e-64, 57.73% id in 291 aa; LysR family transcriptional regulator 1246452 3096786 BPSS0944 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110953.1 1245541 R 272560 CDS YP_110954.1 53721969 3094901 1247073..1248020 1 NC_006351.1 Similar to the C-terminal regions of Escherichia coli, and Shigella flexneri lipoprotein NlpD precursor SWALL:NLPD_ECOLI (SWALL:P33648) (379 aa) fasta scores: E(): 1.3e-12, 32.25% id in 310 aa, and to Rhodocyclus gelatinosus NlpD protein SWALL:Q9JP90 (EMBL:AB034704) (314 aa) fasta scores: E(): 1.4e-28, 42.95% id in 305 aa; peptidase 1248020 3094901 BPSS0945 Burkholderia pseudomallei K96243 peptidase YP_110954.1 1247073 D 272560 CDS YP_110955.1 53721970 3095241 1248195..1249082 1 NC_006351.1 Similar to Yersinia enterocolitica beta-lactamase precursor BlaA SWALL:BLAC_YEREN (SWALL:Q01166) (294 aa) fasta scores: E(): 1.5e-60, 57.43% id in 289 aa. Previously sequenced as Burkholderia pseudomallei class A beta-lactamase PenA or Bla-BPS-1d SWALL:Q932Y0 (EMBL:AY032872) (295 aa) fasta scores: E(): 4.9e-114, 100% id in 295 aa; beta-lactamase precursor 1249082 penA 3095241 penA Burkholderia pseudomallei K96243 beta-lactamase precursor YP_110955.1 1248195 D 272560 CDS YP_110956.1 53721971 3094902 1249773..1250645 1 NC_006351.1 Similar to Escherichia coli glycine cleavage system transcriptional activator GcvA SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.6e-32, 37.93% id in 290 aa, and to Pseudomonas putida transcriptional regulator PP1393 SWALL:AAN67016 (EMBL:AE016779) (291 aa) fasta scores: E(): 4.4e-49, 51.86% id in 268 aa; LysR family transcriptional regulator 1250645 3094902 BPSS0948 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_110956.1 1249773 D 272560 CDS YP_110957.1 53721972 3096121 complement(1250756..1251091) 1 NC_006351.1 Poor database matches. N-terminus is similar to the N-terminal region of Escherichia coli hypothetical protein YmdA SWALL:YMDA_ECOLI (SWALL:P75917) (103 aa) fasta scores: E(): 2.5, 32.85% id in 70 aa; hypothetical protein 1251091 3096121 BPSS0949 Burkholderia pseudomallei K96243 hypothetical protein YP_110957.1 1250756 R 272560 CDS YP_110958.1 53721973 3095441 complement(1251939..1252727) 1 NC_006351.1 Similar to Streptococcus pneumoniae oligopeptide transport ATP-binding protein AmiF SWALL:AMIF_STRPN (SWALL:P18766) (308 aa) fasta scores: E(): 5.8e-29, 43.13% id in 255 aa, and to Rhizobium meliloti dipeptide transport ATP-binding ABC transporter protein r02409 or smc01529 SWALL:Q92N30 (EMBL:AL591790) (255 aa) fasta scores: E(): 2.5e-46, 59.44% id in 254 aa; ABC transporter ATP-binding protein 1252727 3095441 BPSS0950 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_110958.1 1251939 R 272560 CDS YP_110959.1 53721974 3095442 complement(1252715..1253584) 1 NC_006351.1 Similar to the N-terminal region of Bacillus subtilis oligopeptide transport ATP-binding protein OppD SWALL:OPPD_BACSU (SWALL:P24136) (358 aa) fasta scores: E(): 8.4e-32, 42.5% id in 280 aa, and to the full length Rhizobium meliloti dipeptide transport ATP-binding ABC transporter protein r02410 or smc01528 SWALL:Q92N29 (EMBL:AL591790) (277 aa) fasta scores: E(): 2.5e-48, 59.05% id in 276 aa; ABC transporter ATP-binding protein 1253584 3095442 BPSS0951 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_110959.1 1252715 R 272560 CDS YP_110960.1 53721975 3095431 complement(1253586..1254527) 1 NC_006351.1 Similar to Escherichia coli dipeptide transport system permease DppC SWALL:DPPC_ECOLI (SWALL:P37315) (300 aa) fasta scores: E(): 1.1e-43, 44.36% id in 275 aa, and to Rhizobium meliloti dipeptide transport system permease ABC transporter protein r02411 or smc01527 SWALL:Q92N28 (EMBL:AL591790) (310 aa) fasta scores: E(): 4.5e-74, 67.56% id in 296 aa. CDS is extended at the N-terminus in comparison to some orthologues; dipeptide transport system permease 1254527 3095431 BPSS0952 Burkholderia pseudomallei K96243 dipeptide transport system permease YP_110960.1 1253586 R 272560 CDS YP_110961.1 53721976 3096578 complement(1254570..1255640) 1 NC_006351.1 Similar to Escherichia coli dipeptide transport system permease DppB SWALL:DPPB_ECOLI (SWALL:P37316) (339 aa) fasta scores: E(): 1.4e-44, 43.21% id in 324 aa, and to Rhizobium meliloti dipeptide transport system permease ABC transporter protein r02412 or smc01526 SWALL:Q92N27 (EMBL:AL591790) (347 aa) fasta scores: E(): 3.9e-78, 62.24% id in 339 aa. CDS is extended at the N-terminus in comparison to some orthologues; dipeptide transport system permease 1255640 3096578 BPSS0953 Burkholderia pseudomallei K96243 dipeptide transport system permease YP_110961.1 1254570 R 272560 CDS YP_110962.1 53721977 3096579 complement(1255661..1257262) 1 NC_006351.1 Similar to Rhizobium meliloti dipeptide binding periplasmic protein r02413 or smc01525 SWALL:Q92N26 (EMBL:AL591790) (546 aa) fasta scores: E(): 1e-68, 51.3% id in 536 aa, and to Agrobacterium tumefaciens ABC transporter substrate binding protein ATU4431 or AGR_L_873 SWALL:Q8U7L8 (EMBL:AE009372) (545 aa) fasta scores: E(): 1.5e-66, 51.61% id in 527 aa. Similar to BPSS0964, 72.744% identity (73.019% ungapped) in 532 aa overlap; extracellular solute-binding protein 1257262 3096579 BPSS0954 Burkholderia pseudomallei K96243 extracellular solute-binding protein YP_110962.1 1255661 R 272560 CDS YP_110963.1 53721978 3095767 complement(1257411..1257980) 1 NC_006351.1 catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent; involved in peptidoglycan synthesis; D-alanyl-D-alanine dipeptidase 1257980 3095767 BPSS0955 Burkholderia pseudomallei K96243 D-alanyl-D-alanine dipeptidase YP_110963.1 1257411 R 272560 CDS YP_110964.1 53721979 3095513 complement(1258000..1258890) 1 NC_006351.1 Weakly similar to Salmonella typhimurium transcriptional regulator stm4417 SWALL:Q8ZK65 (EMBL:AE008907) (277 aa) fasta scores: E(): 3e-06, 20.75% id in 265 aa, and to Yersinia pestis hypothetical protein ypo2576 SWALL:Q8ZDJ0 (EMBL:AJ414152) (284 aa) fasta scores: E(): 1.1e-05, 22.84% id in 267 aa; hypothetical protein 1258890 3095513 BPSS0956 Burkholderia pseudomallei K96243 hypothetical protein YP_110964.1 1258000 R 272560 CDS YP_110965.1 53721980 3095514 complement(1259881..1261092) 1 NC_006351.1 No significant database matches to the full length CDS. C-terminus is weakly similar to the C-terminal region of Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1016 or rs04262 SWALL:Q8Y0M7 (EMBL:AL646062) (523 aa) fasta scores: E(): 4.1, 25.14% id in 354 aa; hypothetical protein 1261092 3095514 BPSS0957 Burkholderia pseudomallei K96243 hypothetical protein YP_110965.1 1259881 R 272560 CDS YP_110966.1 53721981 3095509 1261382..1263367 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0091 SWALL:Q9I741 (EMBL:AE004447) (643 aa) fasta scores: E(): 1.4e-75, 37.03% id in 640 aa, and to the N-terminal region of Pseudomonas aeruginosa hypothetical protein pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 3e-79, 37.89% id in 636 aa; hypothetical protein 1263367 3095509 BPSS0958 Burkholderia pseudomallei K96243 hypothetical protein YP_110966.1 1261382 D 272560 CDS YP_110967.1 53721982 3096496 1263459..1263899 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo3614 SWALL:Q8ZB15 (EMBL:AJ414158) (140 aa) fasta scores: E(): 2.2e-10, 30.88% id in 136 aa, and to Ralstonia solanacearum hypothetical protein rsp1138 or rs05481 SWALL:Q8XQT1 (EMBL:AL646083) (143 aa) fasta scores: E(): 1.2e-09, 26.61% id in 139 aa; hypothetical protein 1263899 3096496 BPSS0959 Burkholderia pseudomallei K96243 hypothetical protein YP_110967.1 1263459 D 272560 CDS YP_110968.1 53721983 3096497 1263951..1268576 1 NC_006351.1 Similar to Ralstonia solanacearum Rhs-related transmembrane protein rsp1137 or rs05482 SWALL:Q8XQT2 (EMBL:AL646083) (1517 aa) fasta scores: E(): 1.2e-94, 34.74% id in 1557 aa. Internal region is similar to an internal region of Escherichia coli RhsD protein precursor SWALL:RHSD_ECOLI (SWALL:P16919) (1426 aa) fasta scores: E(): 1e-13, 28.1% id in 1000 aa; Rhs-related membrane protein 1268576 3096497 BPSS0960 Burkholderia pseudomallei K96243 Rhs-related membrane protein YP_110968.1 1263951 D 272560 CDS YP_110969.1 53721984 3096672 1268583..1269062 1 NC_006351.1 hypothetical protein 1269062 3096672 BPSS0961 Burkholderia pseudomallei K96243 hypothetical protein YP_110969.1 1268583 D 272560 CDS YP_110970.1 53721985 3095427 1270105..1273500 1 NC_006351.1 Weakly similar to Serratia marcescens extracellular serine protease precursor SWALL:PRTT_SERMA (SWALL:P29805) (1045 aa) fasta scores: E(): 2.8e-32, 29.08% id in 1193 aa, and to Pseudomonas fluorescens serine protease homologue PspB SWALL:Q9ZNI5 (EMBL:AB015053) (1036 aa) fasta scores: E(): 8.4e-71, 36.9% id in 1176 aa. Autotransporter protein; extracellular serine protease precursor 1273500 3095427 BPSS0962 Burkholderia pseudomallei K96243 extracellular serine protease precursor YP_110970.1 1270105 D 272560 CDS YP_110971.1 53721986 3095428 1273540..1274226 1 NC_006351.1 hypothetical protein 1274226 3095428 BPSS0963 Burkholderia pseudomallei K96243 hypothetical protein YP_110971.1 1273540 D 272560 CDS YP_110972.1 53721987 3095768 complement(1274424..1276016) 1 NC_006351.1 Similar to Escherichia coli periplasmic dipeptide transport protein precursor DppA SWALL:DPPA_ECOLI (SWALL:P23847) (535 aa) fasta scores: E(): 3.4e-17, 26.19% id in 542 aa, and to Agrobacterium tumefaciens ABC transporter substrate binding protein ATU4431 or AGR_L_873 SWALL:Q8U7L8 (EMBL:AE009372) (545 aa) fasta scores: E(): 6.3e-65, 51.02% id in 535 aa. Similar to BPSS0954, 72.744% identity (73.019% ungapped) in 532 aa overlap; periplasmic solute-binding protein 1276016 3095768 BPSS0964 Burkholderia pseudomallei K96243 periplasmic solute-binding protein YP_110972.1 1274424 R 272560 CDS YP_110973.1 53721988 3095557 1276302..1277564 1 NC_006351.1 C-terminal region is similar to Bacillus subtilis oxalate decarboxylase OxdD SWALL:OXDD_BACSU (SWALL:O34767) (392 aa) fasta scores: E(): 3.5e-70, 51.09% id in 366 aa. Full legth CDS is similar to Agrobacterium tumefaciens oxalate decarboxylase ATU4771 or AGR_L_224 SWALL:Q8U6N6 (EMBL:AE009405) (415 aa) fasta scores: E(): 1e-106, 63.15% id in 418 aa; oxalate decarboxylase 1277564 3095557 BPSS0965 Burkholderia pseudomallei K96243 oxalate decarboxylase YP_110973.1 1276302 D 272560 CDS YP_110974.1 53721989 3095558 1277697..1278992 1 NC_006351.1 Similar to Escherichia coli manganese transport protein MntH SWALL:MNTH_ECOLI (SWALL:P77145) (412 aa) fasta scores: E(): 3.1e-65, 48.08% id in 391 aa, and to Deinococcus radiodurans probable manganese transport protein dr1709 SWALL:MNTH_DEIRA (SWALL:Q9RTP8) (436 aa) fasta scores: E(): 9.4e-74, 51.75% id in 398 aa; manganese transport protein 1278992 3095558 BPSS0966 Burkholderia pseudomallei K96243 manganese transport protein YP_110974.1 1277697 D 272560 CDS YP_110975.1 53721990 3096307 complement(1279448..1279900) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0141 or rs01011 SWALL:Q8Y340 (EMBL:AL646057) (166 aa) fasta scores: E(): 9.8e-31, 70.31% id in 128 aa, and to Xanthomonas campestris membrane protein xcc3812 SWALL:AAM43486 (EMBL:AE012502) (144 aa) fasta scores: E(): 1.6e-30, 77.5% id in 120 aa; hypothetical protein 1279900 3096307 BPSS0967 Burkholderia pseudomallei K96243 hypothetical protein YP_110975.1 1279448 R 272560 CDS YP_110976.1 53721991 3096965 complement(1280149..1281057) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc3414 or rs01793 SWALL:YY14_RALSO (SWALL:Q8XTY1) (306 aa) fasta scores: E(): 1.1e-50, 48.66% id in 300 aa, and to Salmonella typhi hypothetical protein sty1534 SWALL:YNEE_SALTI (SWALL:Q8Z706) (315 aa) fasta scores: E(): 3e-39, 43.1% id in 290 aa; hypothetical protein 1281057 3096965 BPSS0968 Burkholderia pseudomallei K96243 hypothetical protein YP_110976.1 1280149 R 272560 CDS YP_110977.1 53721992 3096966 complement(1281070..1283394) 1 NC_006351.1 Similar to Ralstonia solanacearum formate dehydrogenase oxidoreductase rsp1048 or rs06130 SWALL:Q8XR20 (EMBL:AL646082) (779 aa) fasta scores: E(): 9e-208, 65.21% id in 756 aa, and to Ralstonia solanacearum formate dehydrogenase oxidoreductase rsp0070 or rs06105 SWALL:Q8XTN6 (EMBL:AL646076) (764 aa) fasta scores: E(): 4e-206, 64.81% id in 756 aa; molybdopterin oxidoreductase 1283394 3096966 BPSS0969 Burkholderia pseudomallei K96243 molybdopterin oxidoreductase YP_110977.1 1281070 R 272560 CDS YP_110978.1 53721993 3096058 1283573..1284991 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa4132 SWALL:Q9HWP9 (EMBL:AE004829) (471 aa) fasta scores: E(): 2.7e-88, 51.82% id in 467 aa, and to Yersinia pestis similar to tyrosine aminotransferase ypo1960 SWALL:Q9ZC65 (EMBL:AL031866) (473 aa) fasta scores: E(): 7.2e-72, 42.45% id in 464 aa; GntR family transcriptional regulator 1284991 3096058 BPSS0970 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_110978.1 1283573 D 272560 CDS YP_110979.1 53721994 3095231 1285062..1285421 1 NC_006351.1 DNA-binding protein 1285421 3095231 BPSS0971 Burkholderia pseudomallei K96243 DNA-binding protein YP_110979.1 1285062 D 272560 CDS YP_110980.1 53721995 3095232 complement(1285528..1286271) 1 NC_006351.1 Similar to Chlorobium tepidum hypothetical protein ct1745 SWALL:AAM72967 (EMBL:AE012928) (267 aa) fasta scores: E(): 1.1e-17, 33.85% id in 254 aa, and to Chlorobium tepidum hypothetical protein ct0395 SWALL:AAM71641 (EMBL:AE012816) (265 aa) fasta scores: E(): 1.3e-17, 38.72% id in 266 aa; hypothetical protein 1286271 3095232 BPSS0972 Burkholderia pseudomallei K96243 hypothetical protein YP_110980.1 1285528 R 272560 CDS YP_110981.1 53721996 3095370 complement(1286347..1289133) 1 NC_006351.1 Similar to Salmonella typhimurium Mg(2+) transport ATPase, P-type 2 MgtB SWALL:ATMB_SALTY (SWALL:P22036) (908 aa) fasta scores: E(): 1e-166, 60.02% id in 908 aa, and to Pseudomonas aeruginosa Mg(2+) transport ATPase, P-type 2 pa4825 SWALL:Q9HUY5 (EMBL:AE004895) (903 aa) fasta scores: E(): 5e-181, 64.78% id in 903 aa; Mg(2+) transport ATPase, P-type 2 1289133 mgtB 3095370 mgtB Burkholderia pseudomallei K96243 Mg(2+) transport ATPase, P-type 2 YP_110981.1 1286347 R 272560 CDS YP_110982.1 53721997 3097149 complement(1289873..1291492) 1 NC_006351.1 No significant database matches to the full length CDS. C-teminal region is similar to an internal region of Bacteroides nodosus extracellular basic protease precursor BprV or Bpr SWALL:BPRV_BACNO (SWALL:P42779) (603 aa) fasta scores: E(): 8.9e-41, 39.94% id in 393 aa. C-terminal region is similar to Burkholderia pseudomallei serine metalloprotease precursor SWALL:Q9F881 (EMBL:AF254803) (500 aa) fasta scores: E(): 1.6e-71, 52.4% id in 500 aa. C-terminal region is similar to BPSS1993, 52.400% identity (54.132% ungapped) in 500 aa overlap; peptidase 1291492 3097149 BPSS0974 Burkholderia pseudomallei K96243 peptidase YP_110982.1 1289873 R 272560 CDS YP_110983.1 53721998 3096900 1293047..1293562 1 NC_006351.1 Similar to Pantoea citrea 2-keto-gluconate dehydrogenase subunit KdgA SWALL:Q9XCR1 (EMBL:AF131202) (189 aa) fasta scores: E(): 0.025, 31.28% id in 163 aa, and to Ralstonia solanacearum transmembrane dehydrogenase rsc0770 or rs05084 SWALL:Q8Y1C0 (EMBL:AL646061) (163 aa) fasta scores: E(): 2.1e-31, 59.39% id in 165 aa; hypothetical protein 1293562 3096900 BPSS0975 Burkholderia pseudomallei K96243 hypothetical protein YP_110983.1 1293047 D 272560 CDS YP_110984.1 53721999 3096901 1293562..1295175 1 NC_006351.1 Similar to Pantoea citrea 2-keto-gluconate dehydrogenase subunit KdgB SWALL:Q9XCR0 (EMBL:AF131202) (553 aa) fasta scores: E(): 1.5e-89, 45.23% id in 535 aa, and to Ralstonia solanacearum transmembrane dehydrogenase rsc0771 or rs05083 SWALL:Q8Y1B9 (EMBL:AL646061) (539 aa) fasta scores: E(): 4.7e-179, 83.48% id in 539 aa; gluconate dehydrogenase subunit 1295175 3096901 BPSS0976 Burkholderia pseudomallei K96243 gluconate dehydrogenase subunit YP_110984.1 1293562 D 272560 CDS YP_110985.1 53722000 3096638 1295220..1296533 1 NC_006351.1 Similar to Pantoea agglomerans cytochrome c subunit II SWALL:Q9RH53 (EMBL:AF068066) (470 aa) fasta scores: E(): 2.6e-64, 47.29% id in 425 aa, and to Ralstonia solanacearum oxidoreductase dehydrogenase rsc0772 or rs05082 SWALL:Q8Y1B8 (EMBL:AL646061) (429 aa) fasta scores: E(): 1.9e-96, 62.91% id in 418 aa. Possible alternative translational start site; cytochrome c subunit II 1296533 3096638 BPSS0977 Burkholderia pseudomallei K96243 cytochrome c subunit II YP_110985.1 1295220 D 272560 CDS YP_110986.1 53722001 3095832 1296725..1297138 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2500 or rs01095 SWALL:Q8XWH4 (EMBL:AL646070) (136 aa) fasta scores: E(): 3.6e-24, 53.54% id in 127 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein YphA or sf2590 SWALL:YPHA_ECOLI (SWALL:P77751) (140 aa) fasta scores: E(): 3.1e-23, 51.96% id in 127 aa; hypothetical protein 1297138 3095832 BPSS0978 Burkholderia pseudomallei K96243 hypothetical protein YP_110986.1 1296725 D 272560 CDS YP_110987.1 53722002 3095833 1297191..1298306 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.5e-11, 30.13% id in 365 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsc2136 or rs01467 SWALL:Q8XXH8 (EMBL:AL646068) (352 aa) fasta scores: E(): 4.2e-38, 40.27% id in 370 aa; porin protein 1298306 3095833 BPSS0979 Burkholderia pseudomallei K96243 porin protein YP_110987.1 1297191 D 272560 CDS YP_110988.1 53722003 3095066 complement(1298505..1299308) 1 NC_006351.1 Similar to Clostridium acetobutylicum uncharacterized membrane protein cac0467 SWALL:Q97LT7 (EMBL:AE007561) (269 aa) fasta scores: E(): 9.4e-35, 38.49% id in 265 aa, and to Thermoanaerobacter tengcongensis hypothetical protein tte0750 SWALL:Q8RBR3 (EMBL:AE013042) (269 aa) fasta scores: E(): 1.2e-29, 35.84% id in 265 aa; hypothetical protein 1299308 3095066 BPSS0980 Burkholderia pseudomallei K96243 hypothetical protein YP_110988.1 1298505 R 272560 CDS YP_110989.1 53722004 3094969 1299775..1300464 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella typhi histidine transport system permease HisQ SWALL:HISQ_SALTY (SWALL:P02913) (228 aa) fasta scores: E(): 1.5e-49, 62.44% id in 229 aa, and to Pseudomonas aeruginosa histidine transport system permease pa2924 SWALL:Q9HZS3 (EMBL:AE004718) (229 aa) fasta scores: E(): 2.1e-55, 67.69% id in 226 aa. Similar to BPSL1032, 76.856% identity (76.856% ungapped) in 229 aa overlap, and to BPSL2394, 77.293% identity (77.293% ungapped) in 229 aa overlap; histidine transport system permease 1300464 hisQ 3094969 hisQ Burkholderia pseudomallei K96243 histidine transport system permease YP_110989.1 1299775 D 272560 CDS YP_110990.1 53722005 3095012 1300461..1301174 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella typhi histidine transport system permease HisM SWALL:HISM_SALTY (SWALL:P02912) (235 aa) fasta scores: E(): 1.3e-56, 61.63% id in 232 aa, and to Pseudomonas aeruginosa histidine transport system permease pa2925 SWALL:Q9HZS2 (EMBL:AE004718) (237 aa) fasta scores: E(): 1.1e-62, 64.97% id in 237 aa. Similar to BPSL1031, 74.153% identity (74.153% ungapped) in 236 aa overlap, and to BPSL2393, 67.511% identity (67.511% ungapped) in 237 aa overlap; histidine transport system permease 1301174 hisM 3095012 hisM Burkholderia pseudomallei K96243 histidine transport system permease YP_110990.1 1300461 D 272560 CDS YP_110991.1 53722006 3095049 1301243..1302010 1 NC_006351.1 Similar to Salmonella typhimurium histidine transport ATP-binding protein HisP SWALL:HISP_SALTY (SWALL:P02915) (258 aa) fasta scores: E(): 2.2e-61, 69.29% id in 254 aa, and to Pseudomonas aeruginosa histidine transport protein pa2926 SWALL:Q9HZS1 (EMBL:AE004718) (255 aa) fasta scores: E(): 6.5e-62, 71.37% id in 255 aa. Similar to BPSL2392, 78.656% identity (78.656% ungapped) in 253 aa overlap, and to BPSL1030, 78.125% identity (78.125% ungapped) in 256 aa overlap, and to BPSS1671, 51.460% identity (52.416% ungapped) in 274 aa overlap; histidine transport ATP-binding protein 1302010 hisP 3095049 hisP Burkholderia pseudomallei K96243 histidine transport ATP-binding protein YP_110991.1 1301243 D 272560 CDS YP_110992.1 53722007 3096584 complement(1302075..1303376) 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA or MurZ SWALL:MURA_ECOLI (SWALL:P28909) (419 aa) fasta scores: E(): 3.9e-30, 31.79% id in 434 aa, and to Borrelia burgdorferi UDP-N-acetylglucosamine 1-carboxyvinyltransferase bb0472 SWALL:MURA_BORBU (SWALL:O51428) (427 aa) fasta scores: E(): 9.1e-49, 33.95% id in 430 aa; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1303376 3096584 BPSS0984 Burkholderia pseudomallei K96243 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_110992.1 1302075 R 272560 CDS YP_110993.1 53722008 3096585 1303632..1304126 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr0112 SWALL:Q98NJ4 (EMBL:AP002994) (132 aa) fasta scores: E(): 2.3e-13, 36.36% id in 132 aa, and to Rhizobium meliloti hypothetical protein r02006 or smc04177 SWALL:Q92K68 (EMBL:AL591789) (153 aa) fasta scores: E(): 1.4e-10, 32.72% id in 165 aa; hypothetical protein 1304126 3096585 BPSS0985 Burkholderia pseudomallei K96243 hypothetical protein YP_110993.1 1303632 D 272560 CDS YP_110994.1 53722009 3096469 1304382..1305131 1 NC_006351.1 Weakly similar to Anabaena sp. hypothetical protein all3462 SWALL:Q8YRI4 (EMBL:AP003593) (260 aa) fasta scores: E(): 2.3, 24.32% id in 259 aa; hypothetical protein 1305131 3096469 BPSS0986 Burkholderia pseudomallei K96243 hypothetical protein YP_110994.1 1304382 D 272560 CDS YP_110995.1 53722010 3095847 complement(1305249..1305593) 1 NC_006351.1 hypothetical protein 1305593 3095847 BPSS0987 Burkholderia pseudomallei K96243 hypothetical protein YP_110995.1 1305249 R 272560 CDS YP_110996.1 53722011 3095848 1306219..1307496 1 NC_006351.1 Possible alternative translational start site. Similar to Bradyrhizobium japonicum inner membrane protein SpcT SWALL:Q9RH56 (EMBL:AF065159) (411 aa) fasta scores: E(): 1.2e-61, 51.97% id in 406 aa, and to Streptomyces spectabilis export protein SpcT SWALL:Q9L629 (EMBL:AF244574) (432 aa) fasta scores: E(): 3.2e-26, 31.02% id in 419 aa; hypothetical protein 1307496 3095848 BPSS0988 Burkholderia pseudomallei K96243 hypothetical protein YP_110996.1 1306219 D 272560 CDS YP_110997.1 53722012 3096853 complement(1307541..1308083) 1 NC_006351.1 Poor database matches. Similar to Ralstonia solanacearum probable transmembrane protein rsp1154 or rs05433 SWALL:Q8XQR7 (EMBL:AL646083) (164 aa) fasta scores: E(): 0.053, 30.3% id in 165 aa; hypothetical protein 1308083 3096853 BPSS0989 Burkholderia pseudomallei K96243 hypothetical protein YP_110997.1 1307541 R 272560 CDS YP_110998.1 53722013 3096250 1308732..1309751 1 NC_006351.1 Similar to Vibrio cholerae hypothetical protein vca0851 SWALL:Q9KL95 (EMBL:AE004413) (359 aa) fasta scores: E(): 5e-25, 34.92% id in 335 aa, and to an internal region of Ralstonia solanacearum transmembrane sensor histidine kinase transcription regulator protein rsc1351 or rs02874 SWALL:Q8XZP4 (EMBL:AL646064) (414 aa) fasta scores: E(): 2.2e-29, 37% id in 354 aa; histidine kinase 1309751 3096250 BPSS0990 Burkholderia pseudomallei K96243 histidine kinase YP_110998.1 1308732 D 272560 CDS YP_110999.1 53722014 3095083 1310767..1312284 1 NC_006351.1 Similar to Pseudomonas aeruginosa catalase precursor KatB SWALL:CATB_PSEAE (SWALL:Q59635) (513 aa) fasta scores: E(): 7.5e-129, 65.6% id in 503 aa, and to Ralstonia solanacearum probable catalase hydroperoxidase HPII oxidoreductase rsp1581 or rs02137 SWALL:Q8XPQ7 (EMBL:AL646085) (509 aa) fasta scores: E(): 1.8e-155, 77.57% id in 504 aa; catalase precursor 1312284 katB 3095083 katB Burkholderia pseudomallei K96243 catalase precursor YP_110999.1 1310767 D 272560 CDS YP_111000.1 53722015 3095065 complement(1312677..1314146) 1 NC_006351.1 Similar to Synechocystis sp. hypothetical protein sll1526 SWALL:YF26_SYNY3 (SWALL:P74360) (506 aa) fasta scores: E(): 1.3e-39, 32.11% id in 439 aa, and to Caulobacter crescentus hypothetical protein cc3341 SWALL:Q9A365 (EMBL:AE005995) (528 aa) fasta scores: E(): 3.1e-27, 30.02% id in 473 aa. Possible alternative translational start site. CDS is truncated at the C-terminus in comparison to some similar proteins; hypothetical protein 1314146 3095065 BPSS0994 Burkholderia pseudomallei K96243 hypothetical protein YP_111000.1 1312677 R 272560 CDS YP_111001.1 53722016 3096304 complement(1314324..1315883) 1 NC_006351.1 Similar to Ralstonia solanacearum regulatory protein HrpB SWALL:HRPB_RALSO (SWALL:P31778) (477 aa) fasta scores: E(): 4.3e-42, 31.48% id in 486 aa, and to Burkholderia pseudomallei hypothetical protein SWALL:Q93L01 (EMBL:AF074878) (483 aa) fasta scores: E(): 5.7e-61, 39.47% id in 494 aa. CDS is extended at the C-terminus in comparison to orthologues; AraC family transcriptional regulator 1315883 3096304 BPSS0995 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111001.1 1314324 R 272560 CDS YP_111002.1 53722017 3096639 complement(1316050..1317054) 1 NC_006351.1 N-terminus is similar to the N-terinal region of Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit Pht3 SWALL:PHT3_PSEPU (SWALL:Q05183) (439 aa) fasta scores: E(): 1.5e-10, 27.44% id in 317 aa. Similar to an internal region to Rhodococcus erythropolis terminal oxygenase KshA SWALL:AAL96829 (EMBL:AY083508) (398 aa) fasta scores: E(): 4.3e-27, 31.57% id in 342 aa; Rieske iron-sulfur domain-containing protein 1317054 3096639 BPSS0996 Burkholderia pseudomallei K96243 Rieske iron-sulfur domain-containing protein YP_111002.1 1316050 R 272560 CDS YP_111003.1 53722018 3096640 complement(1317220..1318899) 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein SCO0642 or SCF91.02c SWALL:Q9RJC2 (EMBL:AL939106) (581 aa) fasta scores: E(): 4.3e-111, 50.61% id in 569 aa, and to Rhizobium loti hypothetical protein mll8338 SWALL:Q983G4 (EMBL:AP003013) (559 aa) fasta scores: E(): 4.1e-93, 42.15% id in 548 aa; hypothetical protein 1318899 3096640 BPSS0997 Burkholderia pseudomallei K96243 hypothetical protein YP_111003.1 1317220 R 272560 CDS YP_111004.1 53722019 3095101 complement(1318941..1320185) 1 NC_006351.1 involved in polyketide production; polyketide beta-ketoacyl:acyl carrier protein synthase 1320185 3095101 BPSS0998 Burkholderia pseudomallei K96243 polyketide beta-ketoacyl:acyl carrier protein synthase YP_111004.1 1318941 R 272560 CDS YP_111005.1 53722020 3095102 complement(1320172..1320411) 1 NC_006351.1 Acyl carrier proteins are involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; this ACP may be involved in the biosynthesis of lipopeptide antibiotics; acyl carrier protein 1320411 3095102 BPSS0999 Burkholderia pseudomallei K96243 acyl carrier protein YP_111005.1 1320172 R 272560 CDS YP_111006.1 53722021 3096724 complement(1320465..1321211) 1 NC_006351.1 involved in polyketide production; polyketide biosynthesis enoyl-CoA hydratase 1321211 3096724 BPSS1000 Burkholderia pseudomallei K96243 polyketide biosynthesis enoyl-CoA hydratase YP_111006.1 1320465 R 272560 CDS YP_111007.1 53722022 3096344 complement(1321248..1322018) 1 NC_006351.1 involved in polyketide synthesis; polyketide biosynthesis enoyl-CoA hydratase 1322018 3096344 BPSS1001 Burkholderia pseudomallei K96243 polyketide biosynthesis enoyl-CoA hydratase YP_111007.1 1321248 R 272560 CDS YP_111008.1 53722023 3096345 complement(1322012..1323271) 1 NC_006351.1 Similar to Myxococcus xanthus ACP synthase (KAS III) homologue Tac SWALL:Q9XB06 (EMBL:AJ132503) (420 aa) fasta scores: E(): 8.3e-121, 67.78% id in 419 aa, and to Yersinia pestis hydroxymethylglutaryl-coenzyme A synthase ypo1457 SWALL:Q8ZG58 (EMBL:AJ414148) (412 aa) fasta scores: E(): 2e-33, 32.78% id in 424 aa. Weakly similar to the N-terminal region of Gallus gallus cytoplasmic hydroxymethylglutaryl-CoA synthase HMGCS SWALL:HMCS_CHICK (SWALL:P23228) (522 aa) fasta scores: E(): 4.3e-05, 25.9% id in 471 aa; hydroxymethylglutaryl-coenzyme A synthase 1323271 3096345 BPSS1002 Burkholderia pseudomallei K96243 hydroxymethylglutaryl-coenzyme A synthase YP_111008.1 1322012 R 272560 CDS YP_111009.1 53722024 3096971 complement(1323383..1323721) 1 NC_006351.1 hypothetical protein 1323721 3096971 BPSS1003 Burkholderia pseudomallei K96243 hypothetical protein YP_111009.1 1323383 R 272560 CDS YP_111010.1 53722025 3095813 complement(1324682..1325866) 1 NC_006351.1 C-terminal region is similar to Escherichia coli malonyl CoA-acyl carrier protein transacylase FabD or TfpA SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 1.2e-21, 35.4% id in 305 aa, and to Bacillus subtilis PksC protein SWALL:O34825 (EMBL:Z99112) (288 aa) fasta scores: E(): 3.7e-43, 51.38% id in 288 aa; acyl transferase 1325866 3095813 BPSS1004 Burkholderia pseudomallei K96243 acyl transferase YP_111010.1 1324682 R 272560 CDS YP_111011.1 53722026 3095814 complement(1326251..1327483) 1 NC_006351.1 Similar to Streptomyces lavendulae integral membrane ion antiporter SWALL:Q93N84 (EMBL:AF386507) (425 aa) fasta scores: E(): 2.2e-34, 34.35% id in 393 aa, and to Xanthomonas axonopodis Na+/H+-exchanging protein yjl094c or xac0254 SWALL:AAM35146 (EMBL:AE011650) (419 aa) fasta scores: E(): 5.8e-29, 32.62% id in 423 aa; sodium/hydrogen exchanger family protein 1327483 3095814 BPSS1005 Burkholderia pseudomallei K96243 sodium/hydrogen exchanger family protein YP_111011.1 1326251 R 272560 CDS YP_111012.1 53722027 3096968 1328091..1341815 1 NC_006351.1 C-terminal region is similar to the C-terminal regions of Bacillus subtilis polyketide synthase PksL or PksX or PksA or OutG SWALL:PKSL_BACSU (SWALL:Q05470) (4427 aa) fasta scores: E(): 3.8e-88, 26.92% id in 4427 aa, and to Pseudomonas fluorescens MmpIV protein SWALL:Q8RL72 (EMBL:AF318063) (6521 aa) fasta scores: E(): 1.7e-78, 28.45% id in 4608 aa; polyketide synthase 1341815 3096968 BPSS1006 Burkholderia pseudomallei K96243 polyketide synthase YP_111012.1 1328091 D 272560 CDS YP_111013.1 53722028 3096857 1341949..1359456 1 NC_006351.1 Internal region is similar to the C-terminal region of Bacillus subtilis polyketide synthase PksL or PksX or PksA or OutG SWALL:PKSL_BACSU (SWALL:Q05470) (4427 aa) fasta scores: E(): 5.7e-96, 33.1% id in 4951 aa, and to the N-terminal region of Streptomyces natalensis polyketide synthase PimS1 SWALL:Q9X993 (EMBL:AJ132222) (6797 aa) fasta scores: E(): 2.2e-79, 28.67% id in 5797 aa; polyketide synthase 1359456 3096857 BPSS1007 Burkholderia pseudomallei K96243 polyketide synthase YP_111013.1 1341949 D 272560 CDS YP_111014.1 53722029 3096858 1359453..1374659 1 NC_006351.1 N-terminal region is similar to the the N-terminal region of Bacillus subtilis polyketide synthase PksK SWALL:PKSK_BACSU (SWALL:P40803) (4447 aa) fasta scores: E(): 1.1e-167, 38.79% id in 3439 aa. Internal region is similar to an internal region of Pseudomonas fluorescens MmpIV protein SWALL:Q8RL72 (EMBL:AF318063) (6521 aa) fasta scores: E(): 2.8e-41, 32.83% id in 4069 aa; polyketide synthase 1374659 3096858 BPSS1008 Burkholderia pseudomallei K96243 polyketide synthase YP_111014.1 1359453 D 272560 CDS YP_111015.1 53722030 3095510 1374643..1379331 1 NC_006351.1 C-terminal region is similar to an internal region of Bacillus subtilis polyketide synthase Pksl or PksX or PksA or OutG SWALL:PKSL_BACSU (SWALL:Q05470) (4427 aa) fasta scores: E(): 3.4e-65, 39.49% id in 633 aa, and to Pseudomonas fluorescens MmpII protein SWALL:Q8RL74 (EMBL:AF318063) (2076 aa) fasta scores: E(): 6.5e-62, 38.92% id in 632 aa; polyketide synthase 1379331 3095510 BPSS1009 Burkholderia pseudomallei K96243 polyketide synthase YP_111015.1 1374643 D 272560 CDS YP_111016.1 53722031 3096636 1379351..1381072 1 NC_006351.1 Similar to Pseudomonas fluorescens halogenase PrnC SWALL:P95482 (EMBL:U74493) (567 aa) fasta scores: E(): 9.7e-91, 43.42% id in 555 aa, and to Burkholderia cepacia PrnC SWALL:Q9RPG5 (EMBL:AF161183) (566 aa) fasta scores: E(): 1.1e-89, 44.99% id in 549 aa; halogenase 1381072 3096636 BPSS1010 Burkholderia pseudomallei K96243 halogenase YP_111016.1 1379351 D 272560 CDS YP_111017.1 53722032 3096637 1381149..1382591 1 NC_006351.1 Similar to Streptomyces lipmanii puromycin resistance protein Pur8 SWALL:PUR8_STRLP (SWALL:P42670) (503 aa) fasta scores: E(): 8.1e-50, 39.73% id in 453 aa, and to Nocardia aerocolonigenes antibiotic antiporter RbmK or RebI SWALL:CAC93723 (EMBL:AF534707) (473 aa) fasta scores: E(): 1.6e-57, 43.76% id in 473 aa, and to Streptomyces coelicolor transmembrane transport protein sco2309 or scc30.17C SWALL:Q9L004 (EMBL:AL939112) (489 aa) fasta scores: E(): 5.5e-55, 41.22% id in 473 aa, and to Streptomyces roseofulvus antibiotic antiporter FrnF SWALL:O68912 (EMBL:AF058302) (517 aa) fasta scores: E(): 7.4e-55, 42.15% id in 465 aa; transmembrane transport protein 1382591 3096637 BPSS1011 Burkholderia pseudomallei K96243 transmembrane transport protein YP_111017.1 1381149 D 272560 CDS YP_111018.1 53722033 3096946 complement(1383248..1385152) 1 NC_006351.1 Similar to Salmonella typhimurium voltage-gated clc-type chloride channel EriC or stm0203 SWALL:ERIC_SALTY (SWALL:Q8ZRP8) (473 aa) fasta scores: E(): 1.3e-18, 27.84% id in 431 aa, and to Ralstonia solanacearum probable transmembrane protein rsc2431 or rs02676 SWALL:Q8XWP2 (EMBL:AL646070) (599 aa) fasta scores: E(): 4.4e-131, 68.8% id in 625 aa, and to Rhizobium loti chloride channel protein mll1477 SWALL:Q98KH1 (EMBL:AP002997) (612 aa) fasta scores: E(): 7.8e-90, 54.41% id in 487 aa; voltage-gated clc-type chloride channel 1385152 3096946 BPSS1012 Burkholderia pseudomallei K96243 voltage-gated clc-type chloride channel YP_111018.1 1383248 R 272560 CDS YP_111019.1 53722034 3095210 complement(1385187..1385600) 1 NC_006351.1 Similar to Ralstonia solanacearum transcription regulator protein rsc2430 or rs02662 SWALL:Q8XWP3 (EMBL:AL646070) (139 aa) fasta scores: E(): 4.6e-30, 63.7% id in 135 aa, and to Rhizobium loti probable transcriptional regulator mlr1478 SWALL:Q98KH0 (EMBL:AP002997) (148 aa) fasta scores: E(): 1.6e-13, 44.8% id in 125 aa; hypothetical protein 1385600 3095210 BPSS1013 Burkholderia pseudomallei K96243 hypothetical protein YP_111019.1 1385187 R 272560 CDS YP_111020.1 53722035 3095211 complement(1385741..1386934) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0130 or rs01000 SWALL:Q8Y351 (EMBL:AL646057) (378 aa) fasta scores: E(): 7.7e-62, 58.61% id in 389 aa, and to Agrobacterium tumefaciens hypothetical protein atu1509 or agr_c_2783 SWALL:Q8UF90 (EMBL:AE009110) (382 aa) fasta scores: E(): 3.5e-50, 45.23% id in 378 aa, and to Pseudomonas stutzeri Orf378 protein SWALL:P95554 (EMBL:Z73914) (378 aa) fasta scores: E(): 1.5e-40, 40.21% id in 378 aa; hypothetical protein 1386934 3095211 BPSS1014 Burkholderia pseudomallei K96243 hypothetical protein YP_111020.1 1385741 R 272560 CDS YP_111021.1 53722036 3095451 1387287..1388258 1 NC_006351.1 Similar to Pseudomonas putida transcriptional regulator, lysR family pp1262 SWALL:AAN66886 (EMBL:AE016778) (315 aa) fasta scores: E(): 7e-57, 51.29% id in 308 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3895 SWALL:Q9HXB8 (EMBL:AE004807) (317 aa) fasta scores: E(): 7.8e-56, 49.68% id in 316 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0876 SWALL:Q9I569 (EMBL:AE004522) (314 aa) fasta scores: E(): 2.4e-52, 49.68% id in 314 aa; LysR family transcriptional regulator 1388258 3095451 BPSS1015 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111021.1 1387287 D 272560 CDS YP_111022.1 53722037 3097254 complement(1388785..1389927) 1 NC_006351.1 Similar to Escherichia coli calcium/proton antiporter ChaA or b1216 SWALL:CHAA_ECOLI (SWALL:P31801) (366 aa) fasta scores: E(): 3.3e-38, 37.89% id in 351 aa, and to Streptomyces coelicolor ionic transporter sco1962 or scc54.22C SWALL:Q9Z504 (EMBL:AL939110) (366 aa) fasta scores: E(): 1.7e-65, 57.26% id in 358 aa, and to Mycobacterium tuberculosis ionic transporter ChaA or rv1607 or mtv046.05 or mt1642 SWALL:O53910 (EMBL:AL022001) (360 aa) fasta scores: E(): 2.8e-63, 56.33% id in 355 aa; ionic antiporter 1389927 3097254 BPSS1016 Burkholderia pseudomallei K96243 ionic antiporter YP_111022.1 1388785 R 272560 CDS YP_111023.1 53722038 3097255 1390598..1391386 1 NC_006351.1 Similar to Escherichia coli multiple antibiotic resistance protein MarC or b1529 SWALL:MARC_ECOLI (SWALL:P31123) (221 aa) fasta scores: E(): 2.5e-15, 29.03% id in 217 aa, and to Caulobacter crescentus hypothetical protein Cc1662 SWALL:Q9A7Q8 (EMBL:AE005841) (228 aa) fasta scores: E(): 4.7e-25, 39.33% id in 211 aa, and to Bordetella pertussis multiple antibiotic resistance protein maR SWALL:Q9X6A6 (EMBL:AF135154) (132 aa) fasta scores: E(): 9.7e-18, 61.29% id in 93 aa; possible alternative start site at codon 42; antibiotic resistance protein 1391386 3097255 BPSS1017 Burkholderia pseudomallei K96243 antibiotic resistance protein YP_111023.1 1390598 D 272560 CDS YP_111024.1 53722039 3096729 complement(1391733..1392641) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa5132 SWALL:Q9HU52 (EMBL:AE004926) (272 aa) fasta scores: E(): 3.3e-25, 43.01% id in 279 aa, and to Yersinia pestis membrane protein ypo1140 SWALL:Q8ZGY1 (EMBL:AJ414146) (272 aa) fasta scores: E(): 1.1e-22, 38.48% id in 278 aa, and to Vibrio cholerae hypothetical protein Vc1074 SWALL:Q9KT31 (EMBL:AE004189) (276 aa) fasta scores: E(): 1.3e-22, 37.4% id in 278 aa. Possible alternative translational start.; hypothetical protein 1392641 3096729 BPSS1018 Burkholderia pseudomallei K96243 hypothetical protein YP_111024.1 1391733 R 272560 CDS YP_111025.1 53722040 3095995 complement(1392817..1393521) 1 NC_006351.1 Similar to Ralstonia sp. U2 fumarylpyruvate hydrolase nagK SWALL:O86042 (EMBL:AF036940) (192 aa) fasta scores: E(): 3.5e-23, 40.2% id in 194 aa, and to Rhizobium loti hypothetical protein Mlr1134 mlr1134 SWALL:Q98L86 (EMBL:AP002996) (232 aa) fasta scores: E(): 1.4e-57, 63.04% id in 230 aa, and to Ralstonia solanacearum hypothetical protein rsc0383 rsc0383 or rs03351 SWALL:Q8Y2F3 (EMBL:AL646059) (233 aa) fasta scores: E(): 1.2e-48, 55.6% id in 232 aa; fumarylpyruvate hydrolase 1393521 3095995 BPSS1019 Burkholderia pseudomallei K96243 fumarylpyruvate hydrolase YP_111025.1 1392817 R 272560 CDS YP_111026.1 53722041 3095996 complement(1393691..1394737) 1 NC_006351.1 Similar to Bacillus sp. GL1 protein Orf1 SWALL:Q9RC93 (EMBL:AB019619) (297 aa) fasta scores: E(): 8.1e-06, 27.88% id in 269 aa, to codon 279 and to Streptococcus pyogenes two-component response regulator Spy1556 SWALL:Q99YT2 (EMBL:AE006588) (246 aa) fasta scores: E(): 4.3e-07, 40.2% id in 97 aa, from codon 209 to codon 301 and to Citrobacter freundii arabinose operon regulatory protein araC SWALL:ARAC_CITFR (SWALL:P11765) (281 aa) fasta scores: E(): 6.3e-07, 38.23% id in 102 aa from codon 194 to codon 296; AraC family transcriptional regulator 1394737 3095996 BPSS1020 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111026.1 1393691 R 272560 CDS YP_111027.1 53722042 3096609 1395387..1395545 1 NC_006351.1 Weakly similar to the N-terminal region Pseudomonas putida conserved hypothetical protein pp2172 SWALL:Q88KW7 (EMBL:AE016782) (147 aa) fasta scores: E(): 1.8, 53.48% id in 43 aa, and to Rhizobium meliloti hypothetical lipoprotein transmembrane r01981 or smc04335 SWALL:Q92K72 (EMBL:AL591789) (57 aa) fasta scores: E(): 7.1, 43.18% id in 44 aa; lipoprotein 1395545 3096609 BPSS1021 Burkholderia pseudomallei K96243 lipoprotein YP_111027.1 1395387 D 272560 CDS YP_111028.1 53722043 3094915 1395561..1396082 1 NC_006351.1 Similar to Rhizobium leguminosarum extracytoplasmic sigma factor EcfR SWALL:Q9X5V5 (EMBL:AF127795) (186 aa) fasta scores: E(): 2.1e-22, 48.64% id in 148 aa, and to Bradyrhizobium japonicum sigma factor EcfA SWALL:Q9EXR8 (EMBL:AJ304855) (172 aa) fasta scores: E(): 6.5e-22, 52.41% id in 166 aa, and to Rhizobium loti RNA polymerase sigma factor mlr0407 SWALL:Q98MW7 (EMBL:AP002994) (183 aa) fasta scores: E(): 3.6e-21, 45.86% id in 157 aa; RNA polymerase sigma factor 1396082 3094915 BPSS1022 Burkholderia pseudomallei K96243 RNA polymerase sigma factor YP_111028.1 1395561 D 272560 CDS YP_111029.1 53722044 3094916 1396079..1396903 1 NC_006351.1 Similar to Agrobacterium tumefaciens transcriptional regulator PrtR or atu1484 or agr_c_2736 SWALL:Q8UFB4 (EMBL:AE009107) (258 aa) fasta scores: E(): 7.5e-16, 34.83% id in 267 aa, and to Agrobacterium tumefaciens hypothetical protein atu2031 or agr_c_3680 SWALL:Q8UDT8 (EMBL:AE009154) (262 aa) fasta scores: E(): 2.3e-15, 32.53% id in 249 aa, and to Rhizobium loti hypothetical protein Mlr7774 SWALL:Q984Z9 (EMBL:AP003012) (263 aa) fasta scores: E(): 1e-14, 32.28% id in 254 aa; hypothetical protein 1396903 3094916 BPSS1023 Burkholderia pseudomallei K96243 hypothetical protein YP_111029.1 1396079 D 272560 CDS YP_111030.1 53722045 3096718 1397146..1397958 1 NC_006351.1 Similar to Caulobacter crescentus hypothetical protein Cc2609 SWALL:Q9A555 (EMBL:AE005928) (230 aa) fasta scores: E(): 9.1e-08, 34.61% id in 156 aa, and to Caulobacter crescentus hypothetical protein Cc3392 SWALL:Q9A314 (EMBL:AE005999) (213 aa) fasta scores: E(): 3.3e-06, 30.35% id in 168 aa, and to Streptomyces coelicolor hypothetical protein sco2566 or scc123.04C SWALL:Q9RDM0 (EMBL:AL939113) (293 aa) fasta scores: E(): 3.8e-06, 30.34% id in 145 aa; hypothetical protein 1397958 3096718 BPSS1024 Burkholderia pseudomallei K96243 hypothetical protein YP_111030.1 1397146 D 272560 CDS YP_111031.1 53722046 3095259 1397998..1398357 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2984 or rs01242 SWALL:Q8XV47 (EMBL:AL646073) (148 aa) fasta scores: E(): 1.5e-18, 54.63% id in 97 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5359 SWALL:Q9HTJ9 (EMBL:AE004947) (151 aa) fasta scores: E(): 5.5e-16, 45.76% id in 118 aa, and to Pseudomonas syringae pv. maculicola hypothetical 13.4 kDa protein SWALL:Q93TD7 (EMBL:AF359557) (126 aa) fasta scores: E(): 6.3e-16, 45.52% id in 123 aa; lipoprotein 1398357 3095259 BPSS1025 Burkholderia pseudomallei K96243 lipoprotein YP_111031.1 1397998 D 272560 CDS YP_111032.1 53722047 3095260 1398354..1398581 1 NC_006351.1 hypothetical protein 1398581 3095260 BPSS1026 Burkholderia pseudomallei K96243 hypothetical protein YP_111032.1 1398354 D 272560 CDS YP_111033.1 53722048 3095415 1398855..1399364 1 NC_006351.1 Similar to Escherichia coli probable RNA polymerase sigma factor FecI or b4293 SWALL:FECI_ECOLI (SWALL:P23484) (173 aa) fasta scores: E(): 1.2e-23, 47.33% id in 150 aa, and to Pseudomonas aeruginosa RNA polymerase sigma factor pa3899 SWALL:Q9HXB4 (EMBL:AE004807) (169 aa) fasta scores: E(): 2.6e-33, 53.61% id in 166 aa, and to Pseudomonas aeruginosa RNA polymerase sigma factor pa1912 SWALL:Q9I2J2 (EMBL:AE004617) (168 aa) fasta scores: E(): 1.3e-30, 53.98% id in 163 aa, and to Bordetella avium RhuI rhuI SWALL:AAM28266 (EMBL:AY095952) (168 aa) fasta scores: E(): 5.7e-27, 48.76% id in 162 aa; RNA polymerase sigma factor 1399364 3095415 BPSS1027 Burkholderia pseudomallei K96243 RNA polymerase sigma factor YP_111033.1 1398855 D 272560 CDS YP_111034.1 53722049 3096782 1399361..1400365 1 NC_006351.1 Similar to Escherichia coli protein iron uptake sensor regulator FecR or b4292 SWALL:FECR_ECOLI (SWALL:P23485) (317 aa) fasta scores: E(): 1.3e-25, 35.04% id in 311 aa, and to Pseudomonas aeruginosa probable transmembrane sensor pa2467 SWALL:Q9I115 (EMBL:AE004674) (328 aa) fasta scores: E(): 8.7e-42, 44.09% id in 322 aa; iron uptake regulator protein 1400365 3096782 BPSS1028 Burkholderia pseudomallei K96243 iron uptake regulator protein YP_111034.1 1399361 D 272560 CDS YP_111035.1 53722050 3096783 1400693..1403158 1 NC_006351.1 Similar to Pseudomonas putida ferric-pseudobactin bn7/bn8 receptor precursor PupB SWALL:PUPB_PSEPU (SWALL:P38047) (809 aa) fasta scores: E(): 1e-32, 26.81% id in 839 aa, and to Pseudomonas aeruginosa probable tonB-dependent receptor pa0151 SWALL:Q9I6Y1 (EMBL:AE004453) (795 aa) fasta scores: E(): 1e-155, 56.5% id in 807 aa, from codon 140 to 822 and to Yersinia pestis hydroxamate-type ferrisiderophore receptor ypo0956 SWALL:Q8ZHE4 (EMBL:AJ414145) (699 aa) fasta scores: E(): 7.2e-110, 45.76% id in 684 aa, and to Escherichia coli O157:H7 iron compound receptor z4386 or ecs3917 SWALL:Q8XBQ5 (EMBL:AE005533) (713 aa) fasta scores: E(): 6.6e-96, 42.67% id in 703 aa, from codon 124 to 822; TonB-dependent receptor family protein 1403158 3096783 BPSS1029 Burkholderia pseudomallei K96243 TonB-dependent receptor family protein YP_111035.1 1400693 D 272560 CDS YP_111036.1 53722051 3095817 complement(1403370..1404350) 1 NC_006351.1 Similar to Bacillus subtilis ribose transport system permease RbsC SWALL:RBSC_BACSU (SWALL:P36948) (322 aa) fasta scores: E(): 1.8e-18, 30.46% id in 302 aa, and to Bacillus halodurans ribose ABC transporter RbsC or bh3731 SWALL:Q9K6J8 (EMBL:AP001519) (314 aa) fasta scores: E(): 1e-20, 30.54% id in 311 aa, and to Thermotoga maritima ribose ABC transporter permease tm0955 SWALL:Q9X050 (EMBL:AE001758) (331 aa) fasta scores: E(): 1.6e-20, 33.02% id in 321 aa; sugar transport system permease 1404350 3095817 BPSS1030 Burkholderia pseudomallei K96243 sugar transport system permease YP_111036.1 1403370 R 272560 CDS YP_111037.1 53722052 3096406 complement(1404343..1405428) 1 NC_006351.1 Similar to Bacillus subtilis ribose transport system permease RbsC SWALL:RBSC_BACSU (SWALL:P36948) (322 aa) fasta scores: E(): 5.2e-23, 35.23% id in 315 aa, and to Rhizobium loti permease of ribose ABC transporter mll2145 SWALL:Q98J21 (EMBL:AP002999) (338 aa) fasta scores: E(): 1e-22, 33.83% id in 334 aa, and to Streptomyces coelicolor bifunctional carbohydrate binding and transport protein sco2747 or scc57a.18 SWALL:Q9RDI0 (EMBL:AL939113) (651 aa) fasta scores: E(): 1.1e-21, 35.54% id in 332 aa; possible alternative start site at codon 30; transmembrane sugar transport protein 1405428 3096406 BPSS1031 Burkholderia pseudomallei K96243 transmembrane sugar transport protein YP_111037.1 1404343 R 272560 CDS YP_111038.1 53722053 3096407 complement(1405425..1407239) 1 NC_006351.1 Similar to Bacillus subtilis ribose transport ATP-binding protein RbsA SWALL:RBSA_BACSU (SWALL:P36947) (493 aa) fasta scores: E(): 7.5e-23, 35.76% id in 548 aa, and to Thermotoga maritima sugar ABC transporter ATP-binding protein tm0115 SWALL:Q9WXX0 (EMBL:AE001697) (520 aa) fasta scores: E(): 2.2e-22, 35.59% id in 545 aa, and to Rhizobium meliloti ATP-binding ABC transporter protein r02565 or smc02337 SWALL:Q92MP8 (EMBL:AL591791) (501 aa) fasta scores: E(): 2.4e-22, 38.63% id in 541 aa; sugar ABC transporter ATP-binding component 1407239 3096407 BPSS1032 Burkholderia pseudomallei K96243 sugar ABC transporter ATP-binding component YP_111038.1 1405425 R 272560 CDS YP_111039.1 53722054 3095593 complement(1407236..1408285) 1 NC_006351.1 Similar to Bacillus subtilis D-ribose-binding protein precursor RbsB SWALL:RBSB_BACSU (SWALL:P36949) (305 aa) fasta scores: E(): 2e-08, 24.02% id in 308 aa, and to Pseudomonas putida sugar-binding protein, pp2757 SWALL:AAN68365 (EMBL:AE016784) (323 aa) fasta scores: E(): 3.6e-61, 57.14% id in 322 aa, and to Pseudomonas putida ribose ABC transporter periplasmic ribose-binding protein, pp2758 SWALL:AAN68366 (EMBL:AE016784) (342 aa) fasta scores: E(): 2.3e-60, 57.79% id in 308 aa, and to Yersinia pestis ABC transporter binding protein y2651 SWALL:AAM86204 (EMBL:AE013867) (363 aa) fasta scores: E(): 7.6e-14, 29.03% id in 341 aa; ABC periplasmic-binding sugar transport protein 1408285 3095593 BPSS1033 Burkholderia pseudomallei K96243 ABC periplasmic-binding sugar transport protein YP_111039.1 1407236 R 272560 CDS YP_111040.1 53722055 3096169 1408916..1409656 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein Mll1752 SWALL:Q98JW1 (EMBL:AP002998) (178 aa) fasta scores: E(): 2.7e-22, 42.44% id in 172 aa, and to Rhizobium loti nickel-cobalt-cadmium resistance protein mlr6490 SWALL:Q989C1 (EMBL:AP003009) (176 aa) fasta scores: E(): 3e-06, 30.95% id in 168 aa, and to Sulfolobus tokodaii hypothetical protein St1187 SWALL:Q972E1 (EMBL:AP000985) (199 aa) fasta scores: E(): 7.1e-06, 29.65% id in 145 aa; hypothetical protein 1409656 3096169 BPSS1034 Burkholderia pseudomallei K96243 hypothetical protein YP_111040.1 1408916 D 272560 CDS YP_111041.1 53722056 3096170 complement(1410001..1410252) 1 NC_006351.1 hypothetical protein 1410252 3096170 BPSS1035 Burkholderia pseudomallei K96243 hypothetical protein YP_111041.1 1410001 R 272560 CDS YP_111042.1 53722057 3096904 complement(1410415..1411674) 1 NC_006351.1 Similar to Paenibacillus sp. A11-2 thermophilic dibenzothiophene desulfurization enzyme C TdsC SWALL:Q9LBX2 (EMBL:AB033997) (414 aa) fasta scores: E(): 1.1e-11, 29.11% id in 419 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2324 SWALL:Q9I1F4 (EMBL:AE004658) (419 aa) fasta scores: E(): 3.5e-105, 68.21% id in 409 aa, and to Xanthomonas axonopodis hypothetical protein Xac0854 SWALL:AAM35742 (EMBL:AE011717) (434 aa) fasta scores: E(): 3.7e-64, 48.41% id in 411 aa; acyl-CoA dehydrogenase 1411674 3096904 BPSS1036 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_111042.1 1410415 R 272560 CDS YP_111043.1 53722058 3096531 complement(1411894..1413363) 1 NC_006351.1 Similar to Bacillus subtilis arabinose-proton symporter AraE SWALL:ARAE_BACSU (SWALL:P96710) (464 aa) fasta scores: E(): 7.5e-19, 26.56% id in 463 aa, and to Thermoplasma acidophilum sugar transport protein related protein ta0775 SWALL:Q9HK33 (EMBL:AL445065) (474 aa) fasta scores: E(): 5e-25, 28.31% id in 452 aa, and to Sulfolobus solfataricus metabolite transport protein, sso3120 SWALL:Q97U99 (EMBL:AE006902) (483 aa) fasta scores: E(): 1e-24, 30.04% id in 406 aa; sugar transport protein 1413363 3096531 BPSS1037 Burkholderia pseudomallei K96243 sugar transport protein YP_111043.1 1411894 R 272560 CDS YP_111044.1 53722059 3096532 1414651..1414923 1 NC_006351.1 hypothetical protein 1414923 3096532 BPSS1038 Burkholderia pseudomallei K96243 hypothetical protein YP_111044.1 1414651 D 272560 CDS YP_111045.1 53722060 3096238 complement(1415018..1416412) 1 NC_006351.1 Almost identical to Burkholderia pseudomallei sensor protein IrlS SWALL:IRLS_BURPS (SWALL:O31396) (464 aa) fasta scores: E(): 6.7e-167, 99.56% id in 464 aa. Similar to and to Ralstonia solanacearum probable transmembrane sensory transduction histidine kinase for cobalt-zinc-cadmium resistance transcription regulator protein CzcS or rsp0488 or rs00366 SWALL:Q8XSI6 (EMBL:AL646079) (465 aa) fasta scores: E(): 6.8e-48, 38.17% id in 461 aa, and to Pseudomonas fluorescens CztS SWALL:Q9ALR1 (EMBL:AY007258) (478 aa) fasta scores: E(): 4.5e-42, 34.64% id in 456 aa. Probably activates partner IrlR by phosphorylation; transmembrane invasion-related two-component sensor protein 1416412 irlS 3096238 irlS Burkholderia pseudomallei K96243 transmembrane invasion-related two-component sensor protein YP_111045.1 1415018 R 272560 CDS YP_111046.1 53722061 3094904 complement(1416409..1417098) 1 NC_006351.1 Almost identical to the previously sequenced Burkholderia pseudomallei transcriptional activator protein IrlR SWALL:IRLR_BURPS (SWALL:O31395) (229 aa) fasta scores: E(): 1.2e-90, 99.56% id in 229 aa. Probably activated following phosphorylation by IrlS. Similar to Ralstonia solanacearum probable response regulator for cobalt zinc cadmium resistance transcription regulator protein CzcR or rsp0489 or rs00367 SWALL:Q8XSI5 (EMBL:AL646079) (224 aa) fasta scores: E(): 2.8e-58, 67.72% id in 220 aa, and to Pseudomonas aeruginosa two-component response regulator IrlR or pa4885 SWALL:Q9HUS8 (EMBL:AE004901) (229 aa) fasta scores: E(): 7.1e-58, 63.06% id in 222 aa; transcriptional activator protein 1417098 irlR 3094904 irlR Burkholderia pseudomallei K96243 transcriptional activator protein YP_111046.1 1416409 R 272560 CDS YP_111047.1 53722062 3096586 complement(1417105..1420338) 1 NC_006351.1 Similar to Alcaligenes sp. cation efflux system protein CzcA SWALL:CZCA_ALCSP (SWALL:P94177) (1063 aa) fasta scores: E(): 0, 73.37% id in 1044 aa, and to Alcaligenes eutrophus cobalt-zinc-cadmium resistance protein CzcA SWALL:CZCA_ALCEU (SWALL:P13511) (1063 aa) fasta scores: E(): 0, 73.08% id in 1044 aa, and to Ralstonia solanacearum probable cation efflux system transmembrane protein CzcA or rsp0493 or rs00371 SWALL:Q8XSI1 (EMBL:AL646079) (1064 aa) fasta scores: E(): 0, 72.42% id in 1059 aa, and to Pseudomonas fluorescens CztA SWALL:Q9ALR2 (EMBL:AY007258) (1051 aa) fasta scores: E(): 0, 70.97% id in 1044 aa; cation efflux system protein 1420338 czcA 3096586 czcA Burkholderia pseudomallei K96243 cation efflux system protein YP_111047.1 1417105 R 272560 CDS YP_111048.1 53722063 3096565 complement(1420384..1421853) 1 NC_006351.1 Similar to Alcaligenes eutrophus cobalt-zinc-cadmium resistance protein CzcB SWALL:CZCB_ALCEU (SWALL:P13510) (520 aa) fasta scores: E(): 3.3e-73, 53.04% id in 443 aa, and to Alcaligenes sp. cation efflux system protein CzcB SWALL:CZCB_ALCSP (SWALL:P94176) (520 aa) fasta scores: E(): 1e-72, 52.59% id in 443 aa, and to Pseudomonas aeruginosa RND divalent metal cation efflux membrane fusion protein czcb precursor czcb or pa2521 SWALL:Q9I0W1 (EMBL:AE004679) (484 aa) fasta scores: E(): 1.1e-62, 45.3% id in 490 aa, and to Ralstonia solanacearum probable cobalt-zinc-cadmium resistance CzcB or rsp0492 or rs00370 SWALL:Q8XSI2 (EMBL:AL646079) (404 aa) fasta scores: E(): 1.9e-56, 50.62% id in 403 aa; cobalt-zinc-cadmium resistance protein 1421853 czcB 3096565 czcB Burkholderia pseudomallei K96243 cobalt-zinc-cadmium resistance protein YP_111048.1 1420384 R 272560 CDS YP_111049.1 53722064 3096566 complement(1421864..1423222) 1 NC_006351.1 Similar to Alcaligenes eutrophus cobalt-zinc-cadmium resistance protein CzcC precursor SWALL:CZCC_ALCEU (SWALL:P13509) (417 aa) fasta scores: E(): 4.7e-34, 39.75% id in 415 aa, and to Alcaligenes sp CzcC SWALL:P94175 (EMBL:D67044) (417 aa) fasta scores: E(): 1.5e-37, 41.3% id in 414 aa, and to Ralstonia solanacearum probable cobalt-zinc-cadmium outer membrane resistance protein CzcC or rsp0491 or rs00369 SWALL:Q8XSI3 (EMBL:AL646079) (441 aa) fasta scores: E(): 4.3e-36, 42.92% id in 424 aa; cobalt-zinc-cadmium resistance protein 1423222 czcC 3096566 czcC Burkholderia pseudomallei K96243 cobalt-zinc-cadmium resistance protein YP_111049.1 1421864 R 272560 CDS YP_111050.1 53722065 3096646 complement(1424167..1424307) 1 NC_006351.1 Similar to Bacteriophage phiE125 gp48 SWALL:Q8W6Q2 (EMBL:AF447491) (43 aa) fasta scores: E(): 1.1e-05, 58.69% id in 46 aa; bacteriophage protein 1424307 3096646 BPSS1044 Burkholderia pseudomallei K96243 bacteriophage protein YP_111050.1 1424167 R 272560 CDS YP_111051.1 53722066 3095670 complement(1424960..1425448) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0419 or rs03387 SWALL:Q8Y2B7 (EMBL:AL646059) (161 aa) fasta scores: E(): 2.1e-48, 75.62% id in 160 aa, and to Mycobacterium tuberculosis hypothetical protein rv3735 rv3735 or mt3840 or mtv025.083 SWALL:O69702 (EMBL:AL022121) (165 aa) fasta scores: E(): 2.2e-40, 64.51% id in 155 aa, and to Sulfolobus tokodaii hypothetical protein St1511 st1511 SWALL:Q970U0 (EMBL:AP000986) (162 aa) fasta scores: E(): 1.4e-33, 55.48% id in 155 aa; hypothetical protein 1425448 3095670 BPSS1045 Burkholderia pseudomallei K96243 hypothetical protein YP_111051.1 1424960 R 272560 CDS YP_111052.1 53722067 3095671 1425780..1426265 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc2911 or rs00184 SWALL:Q8XVC0 (EMBL:AL646072) (162 aa) fasta scores: E(): 1.3e-38, 63.35% id in 161 aa, and to Rhizobium meliloti hypothetical protein r00461 or smc01705 SWALL:Q92SE2 (EMBL:AL591783) (156 aa) fasta scores: E(): 4.5e-22, 44.8% id in 154 aa, and to Rhizobium loti hypothetical protein Mlr1045 SWALL:Q98LF3 (EMBL:AP002996) (157 aa) fasta scores: E(): 6.8e-20, 38.71% id in 155 aa, and to Chlorobium tepidum hypothetical protein Ct1883 SWALL:AAM73102 (EMBL:AE012939) (155 aa) fasta scores: E(): 9.8e-11, 32.85% id in 140 aa; hypothetical protein 1426265 3095671 BPSS1046 Burkholderia pseudomallei K96243 hypothetical protein YP_111052.1 1425780 D 272560 CDS YP_111053.1 53722068 3096043 complement(1426470..1426808) 1 NC_006351.1 Limited similarity to Neisseria meningitidis hypothetical 13.0 kDa protein SWALL:Q9F403 (EMBL:AJ277475) (109 aa) fasta scores: E(): 0.0091, 32.46% id in 77 aa; hypothetical protein 1426808 3096043 BPSS1047 Burkholderia pseudomallei K96243 hypothetical protein YP_111053.1 1426470 R 272560 CDS YP_111054.1 53722069 3095639 1427049..1427201 1 NC_006351.1 hypothetical protein 1427201 3095639 BPSS1047a Burkholderia pseudomallei K96243 hypothetical protein YP_111054.1 1427049 D 272560 CDS YP_111055.1 53722070 3095640 1427189..1427971 1 NC_006351.1 hypothetical protein 1427971 3095640 BPSS1048 Burkholderia pseudomallei K96243 hypothetical protein YP_111055.1 1427189 D 272560 CDS YP_111056.1 53722071 3097210 1428105..1428290 1 NC_006351.1 hypothetical protein 1428290 3097210 BPSS1048a Burkholderia pseudomallei K96243 hypothetical protein YP_111056.1 1428105 D 272560 CDS YP_111057.1 53722072 3095132 1428287..1428508 1 NC_006351.1 hypothetical protein 1428508 3095132 BPSS1048b Burkholderia pseudomallei K96243 hypothetical protein YP_111057.1 1428287 D 272560 CDS YP_111058.1 53722073 3095133 1428512..1428727 1 NC_006351.1 hypothetical protein 1428727 3095133 BPSS1048c Burkholderia pseudomallei K96243 hypothetical protein YP_111058.1 1428512 D 272560 CDS YP_111059.1 53722074 3095686 1428736..1428873 1 NC_006351.1 hypothetical protein 1428873 3095686 BPSS1048d Burkholderia pseudomallei K96243 hypothetical protein YP_111059.1 1428736 D 272560 CDS YP_111060.1 53722075 3095882 1429034..1429246 1 NC_006351.1 hypothetical protein 1429246 3095882 BPSS1049 Burkholderia pseudomallei K96243 hypothetical protein YP_111060.1 1429034 D 272560 CDS YP_111061.1 53722076 3095883 1429448..1430689 1 NC_006351.1 hypothetical protein 1430689 3095883 BPSS1050 Burkholderia pseudomallei K96243 hypothetical protein YP_111061.1 1429448 D 272560 CDS YP_111062.1 53722077 3096890 1430689..1430895 1 NC_006351.1 hypothetical protein 1430895 3096890 BPSS1051 Burkholderia pseudomallei K96243 hypothetical protein YP_111062.1 1430689 D 272560 CDS YP_111063.1 53722078 3096276 1430895..1432688 1 NC_006351.1 Similar to Bacteriophage HP1 Replication protein Rep SWALL:REP_BPHP1 (SWALL:P51711) (775 aa) fasta scores: E(): 3.1e-41, 34.84% id in 442 aa, and to Haemophilus phage HP2 Rep SWALL:Q94N00 (EMBL:AY027935) (775 aa) fasta scores: E(): 3.1e-41, 34.68% id in 444 aa, and to Bacteriophage 186 replication gene A protein or cp87 SWALL:VPA_BP186 (SWALL:P41064) (694 aa) fasta scores: E(): 2e-39, 37.24% id in 443 aa; bacteriophage replication protein 1432688 3096276 BPSS1052 Burkholderia pseudomallei K96243 bacteriophage replication protein YP_111063.1 1430895 D 272560 CDS YP_111064.1 53722079 3096277 1432704..1432970 1 NC_006351.1 Limited similarity to Bacteriophage phi CTX orf34 SWALL:Q9ZXJ1 (EMBL:AB008550) (97 aa) fasta scores: E(): 0.0061, 30% id in 70 aa, and to Ralstonia solanacearum transcriptional activator transcription regulator protein rsc1904 or rs03470 SWALL:Q8XY59 (EMBL:AL646067) (82 aa) fasta scores: E(): 0.0072, 28.91% id in 83 aa; bacteriophage-acquired protein 1432970 3096277 BPSS1053 Burkholderia pseudomallei K96243 bacteriophage-acquired protein YP_111064.1 1432704 D 272560 CDS YP_111065.1 53722080 3096039 1432967..1433173 1 NC_006351.1 Limited similarity to Ralstonia solanacearum bacteriophage transcriptional activator-related transcription regulator protein rsc0964 or rs04403 SWALL:Q8Y0S9 (EMBL:AL646062) (73 aa) fasta scores: E(): 0.0084, 36.17% id in 47 aa, and to Ralstonia solanacearum transcriptional activator transcription regulator protein rsc1904 or rs03470 SWALL:Q8XY59 (EMBL:AL646067) (82 aa) fasta scores: E(): 0.096, 40% id in 50 aa; bacteriophage-acquired protein 1433173 3096039 BPSS1054 Burkholderia pseudomallei K96243 bacteriophage-acquired protein YP_111065.1 1432967 D 272560 CDS YP_111066.1 53722081 3095488 1433260..1433916 1 NC_006351.1 Similar to Mycobacterium celatum ParA-like protein SWALL:Q9XCD0 (EMBL:AF312688) (214 aa) fasta scores: E(): 1.1e-14, 35.6% id in 191 aa, and to Pseudomonas syringae Partition protein Par SWALL:Q9RBZ4 (EMBL:AF169828) (227 aa) fasta scores: E(): 2.1e-29, 47.34% id in 207 aa, and to Aquifex aeolicus hypothetical protein Aa35 aa35 SWALL:O66424 (EMBL:AE000667) (213 aa) fasta scores: E(): 3.3e-18, 37.85% id in 214 aa; partition protein 1433916 3095488 BPSS1055 Burkholderia pseudomallei K96243 partition protein YP_111066.1 1433260 D 272560 CDS YP_111067.1 53722082 3095489 1434117..1434272 1 NC_006351.1 CopG family transcriptional regulator 1434272 3095489 BPSS1056 Burkholderia pseudomallei K96243 CopG family transcriptional regulator YP_111067.1 1434117 D 272560 CDS YP_111068.1 53722083 3094933 1434375..1434908 1 NC_006351.1 Similar to the bacteriophage phiE125 gp29 SWALL:Q8W6S2 (EMBL:AF447491) (186 aa) fasta scores: E(): 1.2e-45, 72.83% id in 173 aa, and to Burkholderia thailandensis gp29 SWALL:Q8VP97 (EMBL:AY063741) (186 aa) fasta scores: E(): 1.2e-45, 72.83% id in 173 aa; bacteriophage gp29 protein 1434908 3094933 BPSS1057 Burkholderia pseudomallei K96243 bacteriophage gp29 protein YP_111068.1 1434375 D 272560 CDS YP_111069.1 53722084 3096159 1434905..1435642 1 NC_006351.1 Similar to Burkholderia thailandensis gp30 SWALL:Q8VP96 (EMBL:AY063741) (244 aa) fasta scores: E(): 3e-31, 43.72% id in 247 aa, and to Bacteriophage phiE125 gp30 SWALL:Q8W6S1 (EMBL:AF447491) (244 aa) fasta scores: E(): 3e-31, 43.72% id in 247 aa; bacteriophage gp30 protein 1435642 3096159 BPSS1058 Burkholderia pseudomallei K96243 bacteriophage gp30 protein YP_111069.1 1434905 D 272560 CDS YP_111070.1 53722085 3096160 1435651..1436772 1 NC_006351.1 Similar to Burkholderia thailandensis gp31 SWALL:Q8VP95 (EMBL:AY063741) (363 aa) fasta scores: E(): 9.6e-34, 37.96% id in 374 aa, and to Bacteriophage phiE125 gp31 SWALL:Q8W6S0 (EMBL:AF447491) (363 aa) fasta scores: E(): 9.6e-34, 37.96% id in 374 aa, and to Pseudomonas aeruginosa hypothetical protein pa0821 SWALL:Q9I5B8 (EMBL:AE004517) (362 aa) fasta scores: E(): 3.1e-20, 34.35% id in 326 aa; bacteriophage gp31 protein 1436772 3096160 BPSS1059 Burkholderia pseudomallei K96243 bacteriophage gp31 protein YP_111070.1 1435651 D 272560 CDS YP_111071.1 53722086 3096773 1437337..1437660 1 NC_006351.1 Similar to Xylella fastidiosa hypothetical protein Xf1703 SWALL:Q9PCS5 (EMBL:AE003994) (102 aa) fasta scores: E(): 2.6e-15, 44.89% id in 98 aa, and to Haemophilus influenzae hypothetical protein Hi1419 SWALL:YE19_HAEIN (SWALL:P44190) (99 aa) fasta scores: E(): 9.1e-15, 48.93% id in 94 aa, and to Anabaena sp. hypothetical protein All2402 SWALL:Q8YUE8 (EMBL:AP003589) (112 aa) fasta scores: E(): 3.4e-13, 52.43% id in 82 aa; hypothetical protein 1437660 3096773 BPSS1060 Burkholderia pseudomallei K96243 hypothetical protein YP_111071.1 1437337 D 272560 CDS YP_111072.1 53722087 3095523 1437657..1438019 1 NC_006351.1 Similar to Xylella fastidiosa hypothetical protein Xf2763 SWALL:Q9P9V8 (EMBL:AE004082) (102 aa) fasta scores: E(): 7.8e-11, 43.61% id in 94 aa, and to Ralstonia solanacearum hypothetical protein rsp0076 or rs05545 SWALL:Q8XTN0 (EMBL:AL646076) (99 aa) fasta scores: E(): 1.3e-10, 46.93% id in 98 aa, and to Haemophilus influenzae hypothetical protein Hi1420 SWALL:YE20_HAEIN (SWALL:P44191) (97 aa) fasta scores: E(): 3.3e-09, 45.45% id in 88 aa; DNA binding protein 1438019 3095523 BPSS1061 Burkholderia pseudomallei K96243 DNA binding protein YP_111072.1 1437657 D 272560 CDS YP_111073.1 53722088 3095524 complement(1438063..1439118) 1 NC_006351.1 Similar to Ralstonia solanacearum probable bacteriophage protein rsc1941 or rs03510 SWALL:Q8XY22 (EMBL:AL646067) (361 aa) fasta scores: E(): 3.6e-90, 62.07% id in 356 aa, and to Xanthomonas campestris phage-related capsid packaging protein Q or xcc2969 SWALL:AAM42241 (EMBL:AE012411) (343 aa) fasta scores: E(): 2.7e-84, 59.4% id in 335 aa, and to Salmonella typhi probable capsid portal protein sty4628 SWALL:Q8Z1E6 (EMBL:AL627283) (348 aa) fasta scores: E(): 2.6e-83, 62.06% id in 319 aa; hypothetical protein 1439118 3095524 BPSS1062 Burkholderia pseudomallei K96243 hypothetical protein YP_111073.1 1438063 R 272560 CDS YP_111074.1 53722089 3096665 complement(1439115..1440920) 1 NC_006351.1 Similar to Bacteriophage P2 terminase, ATPase subunit P SWALL:VPP_BPP2 (SWALL:P25479) (590 aa) fasta scores: E(): 5.2e-136, 56.32% id in 593 aa, and to Bacteriophage phi CTX Pseudomonas aeruginosa phage phi ctx SWALL:Q9ZXM5 (EMBL:AB008550) (594 aa) fasta scores: E(): 7.1e-160, 67.37% id in 564 aa, and to Xanthomonas campestris phage-related terminase P or xcc2970 SWALL:AAM42242 (EMBL:AE012411) (594 aa) fasta scores: E(): 1.3e-152, 62.52% id in 579 aa, and to Xanthomonas axonopodis phage-related terminase P or xac2642 SWALL:AAM37489 (EMBL:AE011904) (594 aa) fasta scores: E(): 5e-152, 62.69% id in 579 aa; alternative start site at codon 13; bacteriophage terminase, ATPase subunit 1440920 3096665 BPSS1063 Burkholderia pseudomallei K96243 bacteriophage terminase, ATPase subunit YP_111074.1 1439115 R 272560 CDS YP_111075.1 53722090 3096472 1441028..1441837 1 NC_006351.1 Similar to Bacteriophage phi CTX Pseudomonas aeruginosa phage phi ctx SWALL:Q9ZXM4 (EMBL:AB008550) (273 aa) fasta scores: E(): 7.2e-31, 45.07% id in 284 aa, and to Salmonella typhi capsid scaffolding protein sty3676 SWALL:Q8Z357 (EMBL:AL627279) (277 aa) fasta scores: E(): 6.3e-30, 46.15% id in 286 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1938 or rs03507 SWALL:Q8XY25 (EMBL:AL646067) (279 aa) fasta scores: E(): 6.3e-30, 48.45% id in 291 aa; bacteriophage protein 1441837 3096472 BPSS1064 Burkholderia pseudomallei K96243 bacteriophage protein YP_111075.1 1441028 D 272560 CDS YP_111076.1 53722091 3096473 1441871..1442884 1 NC_006351.1 Similar to Bacteriophage P2 major capsid protein precursor N SWALL:VPN_BPP2 (SWALL:P25477) (357 aa) fasta scores: E(): 5.6e-72, 54.97% id in 342 aa, and to Bacteriophage phi CTX Pseudomonas aeruginosa phage phi ctx SWALL:Q9ZXM3 (EMBL:AB008550) (338 aa) fasta scores: E(): 1.7e-81, 64.2% id in 338 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1937 or rs03506 SWALL:Q8XY26 (EMBL:AL646067) (338 aa) fasta scores: E(): 2.6e-81, 62.9% id in 337 aa; major capsid protein 1442884 3096473 BPSS1065 Burkholderia pseudomallei K96243 major capsid protein YP_111076.1 1441871 D 272560 CDS YP_111077.1 53722092 3096983 1442881..1443570 1 NC_006351.1 Similar to Bacteriophage P2 terminase, endonuclease subunit M SWALL:VPM_BPP2 (SWALL:P25476) (247 aa) fasta scores: E(): 1.8e-27, 46.29% id in 216 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1936 or rs03505 SWALL:Q8XY27 (EMBL:AL646067) (240 aa) fasta scores: E(): 4.1e-30, 49.16% id in 238 aa, and to Bacteriophage phi CTX Pseudomonas aeruginosa phage phi ctx SWALL:Q9ZXM2 (EMBL:AB008550) (233 aa) fasta scores: E(): 3.8e-29, 48.9% id in 229 aa, and to Bacteriophage 186 protein R SWALL:O80305 (EMBL:U32222) (249 aa) fasta scores: E(): 1.2e-28, 48% id in 225 aa; bacteriophage terminase, endonuclease subunit 1443570 3096983 BPSS1066 Burkholderia pseudomallei K96243 bacteriophage terminase, endonuclease subunit YP_111077.1 1442881 D 272560 CDS YP_111078.1 53722093 3097183 1443670..1444149 1 NC_006351.1 Similar to Bacteriophage P2 head completion/stabilization protein L SWALL:VPL_BPP2 (SWALL:P25475) (169 aa) fasta scores: E(): 2.5e-15, 42.25% id in 142 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1935 or rs03504 SWALL:Q8XY28 (EMBL:AL646067) (159 aa) fasta scores: E(): 2.3e-26, 55.34% id in 159 aa, and to Xanthomonas campestris phage-related capsid completion protein l or xcc2974 SWALL:AAM42246 (EMBL:AE012412) (155 aa) fasta scores: E(): 1.4e-20, 47.79% id in 159 aa; bacteriophage head completion/stabilization protein 1444149 3097183 BPSS1067 Burkholderia pseudomallei K96243 bacteriophage head completion/stabilization protein YP_111078.1 1443670 D 272560 CDS YP_111079.1 53722094 3097184 1444149..1444400 1 NC_006351.1 hypothetical protein 1444400 3097184 BPSS1068 Burkholderia pseudomallei K96243 hypothetical protein YP_111079.1 1444149 D 272560 CDS YP_111080.1 53722095 3096023 1444397..1444603 1 NC_006351.1 Similar to Bacteriophage P2 tail protein X SWALL:VPX_BPP2 (SWALL:P51772) (67 aa) fasta scores: E(): 2.4e-11, 69.81% id in 53 aa, and to Xanthomonas axonopodis phage-related tail protein X or xac2647 or xcc2975 SWALL:AAM42247 (EMBL:AE011905) (69 aa) fasta scores: E(): 3.6e-13, 59.42% id in 69 aa, and to Xanthomonas axonopodis phage-related tail protein X or xac2647 or xcc2975 SWALL:AAM37494 (EMBL:AE011905) (69 aa) fasta scores: E(): 3.6e-13, 59.42% id in 69 aa; bacteriophage tail protein X 1444603 3096023 BPSS1069 Burkholderia pseudomallei K96243 bacteriophage tail protein X YP_111080.1 1444397 D 272560 CDS YP_111081.1 53722096 3095772 1444618..1444962 1 NC_006351.1 Similar to Xanthomonas campestris phage-related protein orf89 or xcc2976 SWALL:AAM42248(118 aa) (EMBL:AE012412)(118 aa) fasta scores: E(): 1.6e-15, 51.75% id in 114 aa,and to Xanthomonas axonopodis phage-related protein orf89 or xac2648 SWALL:AAM37495 (EMBL:AE011905) (118 aa) fasta scores: E(): 2.5e-15, 50.87% id in 114 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0908 pa0908 SWALL:Q9I549 (EMBL:AE004525) (124 aa) fasta scores: E():/ 1.3e-09, 39.28% id in 112 aa; bacteriophage membrane protein 1444962 3095772 BPSS1070 Burkholderia pseudomallei K96243 bacteriophage membrane protein YP_111081.1 1444618 D 272560 CDS YP_111082.1 53722097 3095773 1444964..1445236 1 NC_006351.1 Similar to Xanthomonas axonopodis phage-related protein orf90 or xac2649 or xcc2977 SWALL:AAM37496 (EMBL:AE011905) (91 aa) fasta scores: E(): 4.7e-10, 41.75% id in 91 aa, and to Xanthomonas axonopodis phage-related protein orf90 or xac2649 or xcc2977 SWALL:AAM42249 (EMBL:AE011905) (91 aa) fasta scores: E(): 4.7e-10, 41.75% id in 91 aa, and to Bacteriophage phi CTX orf10 SWALL:Q9ZXL7 (EMBL:AB008550) (90 aa) fasta scores: E(): 2.9e-06, 37.5% id in 80 aa; bacteriophage membrane protein 1445236 3095773 BPSS1071 Burkholderia pseudomallei K96243 bacteriophage membrane protein YP_111082.1 1444964 D 272560 CDS YP_111083.1 53722098 3095135 1445233..1446045 1 NC_006351.1 Similar to Ralstonia solanacearum phage-related protein rsc1931 or rs03500 SWALL:Q8XY32 (EMBL:AL646067) (268 aa) fasta scores: E(): 6.8e-50, 56.77% id in 273 aa, and to Bacteriophage phi CTX orf11 SWALL:Q9ZXL6 (EMBL:AB008550) (268 aa) fasta scores: E(): 1e-44, 50.92% id in 269 aa, and to Brucella melitensis hypothetical protein Bmeii0008 bmeii0008 SWALL:Q8YE10 (EMBL:AE009639) (174 aa) fasta scores: E(): 2.4e-09, 32.72% id in 165 aa; bacteriophage-acquired protein 1446045 3095135 BPSS1072 Burkholderia pseudomallei K96243 bacteriophage-acquired protein YP_111083.1 1445233 D 272560 CDS YP_111084.1 53722099 3096223 1446042..1446482 1 NC_006351.1 Limited similarity to Bacteriophage P2 protein LysB SWALL:LYSB_BPP2 (SWALL:P51770) (141 aa) fasta scores: E(): 0.00062, 29.92% id in 127 aa, and to Bacteriophage phi CTX orf12 SWALL:Q9ZXL5 (EMBL:AB008550) (153 aa) fasta scores: E(): 0.0018, 31.65% id in 139 aa, and to Bacteriophage 186 orf27 SWALL:O80310 (EMBL:U32222) (137 aa) fasta scores: E(): 0.0018, 32.14% id in 112 aa; bacteriophage protein 1446482 3096223 BPSS1073 Burkholderia pseudomallei K96243 bacteriophage protein YP_111084.1 1446042 D 272560 CDS YP_111085.1 53722100 3096224 1446319..1446594 1 NC_006351.1 Similar to Bacteriophage P2 LysC SWALL:Q8LTD0 (EMBL:AF063097) (96 aa) fasta scores: E(): 1.3e-09, 48.78% id in 82 aa, and to Bacteriophage WPhi LysC SWALL:Q7Y4E1 (EMBL:AY135739) (96 aa) fasta scores: E(): 3.2e-09, 48.78% id in 82 aa; hypothetical protein 1446594 3096224 BPSS1073A Burkholderia pseudomallei K96243 hypothetical protein YP_111085.1 1446319 D 272560 CDS YP_111086.1 53722101 3096009 1446587..1447003 1 NC_006351.1 Similar to Bacteriophage P2 tail completion protein R SWALL:VPR_BPP2 (SWALL:P36933) (155 aa) fasta scores: E(): 3.8e-13, 35.87% id in 131 aa, and to Ralstonia solanacearum probable tail completion-like protein rsc1929 or rs03499 SWALL:Q8XY34 (EMBL:AL646067) (144 aa) fasta scores: E(): 4.5e-19, 43.47% id in 138 aa, and to Bacteriophage phi CTX orf13 SWALL:Q9ZXL3 (EMBL:AB008550) (178 aa) fasta scores: E(): 1.2e-18, 41.22% id in 131 aa; bacteriophage tail completion protein R 1447003 3096009 BPSS1074 Burkholderia pseudomallei K96243 bacteriophage tail completion protein R YP_111086.1 1446587 D 272560 CDS YP_111087.1 53722102 3096178 1447000..1447467 1 NC_006351.1 Similar to Bacteriophage P2 tail completion proteinS SWALL:VPS_BPP2 (SWALL:P36934) (150 aa) fasta scores: E(): 2.8e-13, 37.66% id in 154 aa, and to Xanthomonas axonopodis phage-related tail protein s or xac2653 SWALL:AAM37500 (EMBL:AE011905) (148 aa) fasta scores: E(): 6.9e-25, 50.99% id in 151 aa, and to Bacteriophage phi CTX orf14 SWALL:Q9ZXL2 (EMBL:AB008550) (156 aa) fasta scores: E(): 9.4e-24, 51.65% id in 151 aa; bacteriophage tail completion protein S 1447467 3096178 BPSS1075 Burkholderia pseudomallei K96243 bacteriophage tail completion protein S YP_111087.1 1447000 D 272560 CDS YP_111088.1 53722103 3096179 1447594..1448124 1 NC_006351.1 hypothetical protein 1448124 3096179 BPSS1076 Burkholderia pseudomallei K96243 hypothetical protein YP_111088.1 1447594 D 272560 CDS YP_111089.1 53722104 3096642 complement(1448290..1449165) 1 NC_006351.1 Similar to Micrococcus lylae DNA methyltransferase MlyiM SWALL:Q93NZ3 (EMBL:AF355462) (266 aa) fasta scores: E(): 3.1e-08, 25.29% id in 253 aa, and to Xanthomonas campestris site-specific DNA-methyltransferase xcc2967 SWALL:AAM42239 (EMBL:AE012411) (234 aa) fasta scores: E(): 7e-38, 47.21% id in 233 aa, and to Xylella fastidiosa site-specific DNA-methyltransferase xf2313 SWALL:Q9PB32 (EMBL:AE004042) (243 aa) fasta scores: E(): 1.5e-37, 48.48% id in 231 aa; possible alternative start site at codon 50; site-specific DNA methyltransferase 1449165 3096642 BPSS1077 Burkholderia pseudomallei K96243 site-specific DNA methyltransferase YP_111089.1 1448290 R 272560 CDS YP_111090.1 53722105 3096211 1449240..1449920 1 NC_006351.1 Similar to Bacteriophage P2 baseplate assembly protein V SWALL:VPV_BPP2 (SWALL:P31340) (211 aa) fasta scores: E(): 2.5e-14, 35.8% id in 229 aa, and to Xanthomonas campestris phage-related baseplate protein V or xcc2986 to codon 187 SWALL:AAM42258 (EMBL:AE012413) (187 aa) fasta scores: E(): 3e-16, 36.46% id in 181 aa, and to Bacteriophage phi CTX orf16 to codon 190 SWALL:Q9ZXL0 (EMBL:AB008550) (190 aa) fasta scores: E(): 4e-15, 35.67% id in 199 aa, and to Bacteriophage 186 orf32 SWALL:O80314 (EMBL:U32222) (213 aa) fasta scores: E(): 1.1e-14, 35.23% id in 210 aa; bacteriophage baseplate assembly protein V 1449920 3096211 BPSS1078 Burkholderia pseudomallei K96243 bacteriophage baseplate assembly protein V YP_111090.1 1449240 D 272560 CDS YP_111091.1 53722106 3096212 1449917..1450279 1 NC_006351.1 Similar to Bacteriophage P2 baseplate assembly protein W SWALL:VPW_BPP2 (SWALL:P51768) (115 aa) fasta scores: E(): 9.7e-12, 36.28% id in 113 aa, and to Bacteriophage phi CTX orf17 SWALL:Q9ZXK9 (EMBL:AB008550) (114 aa) fasta scores: E(): 8.9e-16, 43.59% id in 117 aa, and to Xanthomonas campestris phage-related baseplate protein W or xcc2987 SWALL:AAM42259 (EMBL:AE012413) (119 aa) fasta scores: E(): 1.3e-15, 56.56% id in 99 aa, and to Ralstonia solanacearum probable phage-related protein rsc1924 or rs03493 SWALL:Q8XY39 (EMBL:AL646067) (115 aa) fasta scores: E(): 3.3e-14, 48.98% id in 98 aa; bacteriophage baseplate assembly protein W 1450279 3096212 BPSS1079 Burkholderia pseudomallei K96243 bacteriophage baseplate assembly protein W YP_111091.1 1449917 D 272560 CDS YP_111092.1 53722107 3096738 1450276..1451181 1 NC_006351.1 Similar to Bacteriophage P2 baseplate assembly protein J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 3.2e-44, 45.6% id in 296 aa, and to Salmonella typhi phage baseplate assembly protein sty3689 SWALL:Q8Z344 (EMBL:AL627279) (302 aa) fasta scores: E(): 2e-48, 50.33% id in 296 aa, and to Salmonella typhi probable phage baseplate assembly protein sty4613 SWALL:Q8Z1G0 (EMBL:AL627283) (302 aa) fasta scores: E(): 3.6e-48, 50% id in 296 aa; bacteriophage baseplate assembly protein J 1451181 3096738 BPSS1080 Burkholderia pseudomallei K96243 bacteriophage baseplate assembly protein J YP_111092.1 1450276 D 272560 CDS YP_111093.1 53722108 3096365 1451174..1451728 1 NC_006351.1 Similar to Bacteriophage P2 tail protein I SWALL:VPI_BPP2 (SWALL:P26701) (176 aa) fasta scores: E(): 9.2e-13, 35.66% id in 143 aa, and to Xanthomonas axonopodis phage-related tail protein i or xac2656 SWALL:AAM37503 (EMBL:AE011905) (180 aa) fasta scores: E(): 2.2e-30, 50.29% id in 171 aa, and to Xanthomonas campestris phage-related tail protein I or xcc2983 SWALL:AAM42255 (EMBL:AE012412) (182 aa) fasta scores: E(): 5.4e-30, 46.89% id in 177 aa; bacteriophage tail protein I 1451728 3096365 BPSS1081 Burkholderia pseudomallei K96243 bacteriophage tail protein I YP_111093.1 1451174 D 272560 CDS YP_111094.1 53722109 3096366 1451739..1454102 1 NC_006351.1 Similar to Bacteriophage phiE125 gp17 from codon 346 to codon 518 SWALL:Q8W6T4 (EMBL:AF447491) (462 aa) fasta scores: E(): 1.6e-06, 41.44% id in 111 aa, and to Xanthomonas campestris phage-related tail fiber protein orf8 or xcc2984 to codon 401 SWALL:AAM42256 (EMBL:AE012412) (401 aa) fasta scores: E(): 1.7e-19, 30.71% id in 394 aa, and to Xylella fastidiosa phage-related tail fiber protein xf1706 from codon 503 to end SWALL:Q9PCS2 (EMBL:AE003994) (387 aa) fasta scores: E(): 1.4e-07, 28.28% id in 251 aa; bacteriophage protein gp17 1454102 3096366 BPSS1082 Burkholderia pseudomallei K96243 bacteriophage protein gp17 YP_111094.1 1451739 D 272560 CDS YP_111095.1 53722110 3095547 1454119..1454790 1 NC_006351.1 Similar to Ralstonia solanacearum tail fiber assembly-like protein rsc1920 or rs03489 to codon 179 SWALL:Q8XY43 (EMBL:AL646067) (250 aa) fasta scores: E(): 4.6e-09, 41.73% id in 115 aa; bacteriophage-acquired protein 1454790 3095547 BPSS1083 Burkholderia pseudomallei K96243 bacteriophage-acquired protein YP_111095.1 1454119 D 272560 CDS YP_111096.1 53722111 3095388 1454846..1456018 1 NC_006351.1 Similar to Bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 1.9e-90, 61.63% id in 391 aa, and to Ralstonia solanacearum probable phage-related protein rsc1918 or rs03487 SWALL:Q8XY45 (EMBL:AL646067) (391 aa) fasta scores: E(): 2.7e-100, 67.26% id in 388 aa, and to Salmonella typhimurium fels-2 prophage: similar to tail sheath proteins in phage p2 stm2701 SWALL:Q8ZMV0 (EMBL:AE008823) (390 aa) fasta scores: E(): 1e-97, 66.83% id in 389 aa; bacteriophage major tail sheath protein 1456018 3095388 BPSS1084 Burkholderia pseudomallei K96243 bacteriophage major tail sheath protein YP_111096.1 1454846 D 272560 CDS YP_111097.1 53722112 3095389 1456034..1456543 1 NC_006351.1 Similar to Bacteriophage P2 major tail tube protein FII SWALL:VPF2_BPP2 (SWALL:P22502) (171 aa) fasta scores: E(): 2.2e-26, 44.7% id in 170 aa, and to Xanthomonas campestris phage-related tail protein FII or xcc2989 SWALL:AAM42261 (EMBL:AE012413) (169 aa) fasta scores: E(): 2e-36, 54.16% id in 168 aa, and to Bacteriophage phi CTX orf23 SWALL:Q9ZXK3 (EMBL:AB008550) (171 aa) fasta scores: E(): 4.7e-33, 52.63% id in 171 aa; bacteriophage major tail tube protein 1456543 3095389 BPSS1085 Burkholderia pseudomallei K96243 bacteriophage major tail tube protein YP_111097.1 1456034 D 272560 CDS YP_111098.1 53722113 3095014 1456601..1456945 1 NC_006351.1 Similar to Bacteriophage P2 protein gpe E SWALL:O64313 (EMBL:AF063097) (91 aa) fasta scores: E(): 1.7e-13, 56.81% id in 88 aa, and to Bacteriophage phi CTX orf24 SWALL:Q9ZXK2 (EMBL:AB008550) (108 aa) fasta scores: E(): 6.9e-14, 54.83% id in 93 aa; bacteriophage protein 1456945 3095014 BPSS1086 Burkholderia pseudomallei K96243 bacteriophage protein YP_111098.1 1456601 D 272560 CDS YP_111099.1 53722114 3095056 1456954..1457067 1 NC_006351.1 Similar to Xanthomonas campestris phage-related protein Orf52 SWALL:Q8P6H8 (EMBL:AE012413) (37 aa) fasta scores: E(): 1.2e-07, 62.16% id in 37 aa, and to Bacteriophage phi CTX Orf24.5 SWALL:Q9ZXK1 (EMBL:AB008550) (39 aa) fasta scores: E(): 6.3e-07, 56.75% id in 37 aa; hypothetical protein 1457067 3095056 BPSS1086a Burkholderia pseudomallei K96243 hypothetical protein YP_111099.1 1456954 D 272560 CDS YP_111100.1 53722115 3095057 1457064..1460030 1 NC_006351.1 Similar to Bacteriophage P2 protein gpt T SWALL:O64314 (EMBL:AF063097) (815 aa) fasta scores: E(): 1.7e-10, 23.27% id in 782 aa, and to Ralstonia solanacearum probable phage-related tail transmembrane protein rsc1914 or rs03483 SWALL:Q8XY49 (EMBL:AL646067) (887 aa) fasta scores: E(): 6.3e-91, 40.06% id in 991 aa, and to Salmonella typhimurium fels-2 prophage:similar to orfG protein in phage 186 stm2697 SWALL:Q8ZMV3 (EMBL:AE008823) (935 aa) fasta scores: E(): 3.7e-18, 23.92% id in 1024 aa; bacteriophage membrane protein 1460030 3095057 BPSS1087 Burkholderia pseudomallei K96243 bacteriophage membrane protein YP_111100.1 1457064 D 272560 CDS YP_111101.1 53722116 3097117 1460048..1460473 1 NC_006351.1 Similar to Bacteriophage phi CTX orf26 SWALL:Q9ZXJ9 (EMBL:AB008550) (146 aa) fasta scores: E(): 1.1e-21, 52% id in 125 aa, and to Xanthomonas campestris phage-related tail protein U or xcc2993 SWALL:AAM42265 (EMBL:AE012413) (133 aa) fasta scores: E(): 2.1e-21, 52.8% id in 125 aa, and to Ralstonia solanacearum probable phage-related tail protein rsc1913 or rs03482 SWALL:Q8XY50 (EMBL:AL646067) (140 aa) fasta scores: E(): 2.3e-20, 45.31% id in 128 aa; bacteriophage tail-related protein 1460473 3097117 BPSS1088 Burkholderia pseudomallei K96243 bacteriophage tail-related protein YP_111101.1 1460048 D 272560 CDS YP_111102.1 53722117 3096031 1460473..1461573 1 NC_006351.1 Similar to Bacteriophage 186 late control gene protein D SWALL:VPD_BP186 (SWALL:P21679) (389 aa) fasta scores: E(): 1.3e-34, 41.59% id in 363 aa, and to Xanthomonas campestris phage-related tail protein D or xcc2994 SWALL:AAM42266 (EMBL:AE012413) (328 aa) fasta scores: E(): 1.6e-62, 49.69% id in 328 aa, and to Bacteriophage phi CTX orf27 SWALL:Q9ZXJ8 (EMBL:AB008550) (424 aa) fasta scores: E(): 2.9e-49, 42.68% id in 328 aa; bacteriophage late control gene D protein 1461573 3096031 BPSS1089 Burkholderia pseudomallei K96243 bacteriophage late control gene D protein YP_111102.1 1460473 D 272560 CDS YP_111103.1 53722118 3095974 complement(1462408..1463523) 1 NC_006351.1 Similar to Vibrio proteolyticus alanine dehydrogenase ald SWALL:O85596 (EMBL:AF070716) (374 aa) fasta scores: E(): 5.5e-77, 63.76% id in 367 aa, and to Vibrio cholerae alanine dehydrogenase vc1905 SWALL:Q9KQU3 (EMBL:AE004266) (374 aa) fasta scores: E(): 3.2e-77, 64.01% id in 364 aa; alanine dehydrogenase 1463523 ald 3095974 ald Burkholderia pseudomallei K96243 alanine dehydrogenase YP_111103.1 1462408 R 272560 CDS YP_111104.1 53722119 3096032 complement(1464248..1464577) 1 NC_006351.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsc0867 or rs04950 SWALL:Q8Y126 (EMBL:AL646061) (96 aa) fasta scores: E(): 3.2e-07, 43.01% id in 93 aa, and to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 2.6e-06, 39.17% id in 97 aa, and to Ralstonia solanacearum hns-like transcription regulator protein rsp0335 or rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 2.6e-05, 35.71% id in 98 aa; hypothetical protein 1464577 3096032 BPSS1091 Burkholderia pseudomallei K96243 hypothetical protein YP_111104.1 1464248 R 272560 CDS YP_111105.1 53722120 3096591 complement(1464591..1465142) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa2582 SWALL:Q9I0Q4 (EMBL:AE004686) (177 aa) fasta scores: E(): 1.2e-14, 41.66% id in 180 aa, and to Escherichia coli ProP effector ProQ or b1831 SWALL:PROQ_ECOLI (SWALL:P45577) (232 aa) fasta scores: E(): 4.3e-06, 37.06% id in 116 aa, and to Escherichia coli O157:H7 proq protein that influences osmotic activation of ProP ProQ or z2878 or ecs2541 SWALL:Q8XCM4 (EMBL:AE005405) (232 aa) fasta scores: E(): 4.3e-06, 37.06% id in 116 aa; possible alternative start site at codon 22; hypothetical protein 1465142 3096591 BPSS1092 Burkholderia pseudomallei K96243 hypothetical protein YP_111105.1 1464591 R 272560 CDS YP_111106.1 53722121 3097162 1465582..1466418 1 NC_006351.1 Similar to Escherichia coli 2-keto-4-pentenoate hydratase MhpD or b0350 from codon 25 SWALL:MHPD_ECOLI (SWALL:P77608) (269 aa) fasta scores: E(): 5.1e-06, 30.07% id in 266 aa, and to Agrobacterium tumefaciens hypothetical protein atu4592 atu4592 or agr_l_566 from codon 24 SWALL:Q8U762 (EMBL:AE009387) (270 aa) fasta scores: E(): 2.2e-13, 29.54% id in 264 aa, and to Ralstonia solanacearum hydratase rsp0891 or rs01662 from codon 89 SWALL:Q8XRG3 (EMBL:AL646081) (265 aa) fasta scores: E(): 5e-07, 34.16% id in 161 aa. Possible alternative translational start site after codon 24; hydratase 1466418 3097162 BPSS1093 Burkholderia pseudomallei K96243 hydratase YP_111106.1 1465582 D 272560 CDS YP_111107.1 53722122 3097163 1466788..1467363 1 NC_006351.1 Similar to Rhodopirellula baltica hypothetical protein SWALL:Q7UN29 (EMBL:BX294146) (182 aa) fasta scores: E(): 1e-11, 36.11% id in 180 aa. C-terminal region is similar to the C-terminal region of Vibrio cholerae hypothetical protein VC1375 SWALL:Q9KS84 (EMBL:AE004217) (242 aa) fasta scores: E(): 1.1e-19, 52.38% id in 126 aa; hypothetical protein 1467363 3097163 BPSS1094 Burkholderia pseudomallei K96243 hypothetical protein YP_111107.1 1466788 D 272560 CDS YP_111108.1 53722123 3095261 1467360..1469207 1 NC_006351.1 Similar to Legionella pneumophila chaperone protein DnaK to codon 431 SWALL:DNAK_LEGPN (SWALL:O32482) (644 aa) fasta scores: E(): 1.5e-08, 26.22% id in 328 aa, and to Vibrio cholerae DnaK-related protein vc1374 to codon 611 SWALL:Q9KS85 (EMBL:AE004217) (631 aa) fasta scores: E(): 2.3e-137, 58.09% id in 618 aa, and to Vibrio cholerae DnaK-related protein vc1373 to codon 611 SWALL:Q9KS86 (EMBL:AE004217) (948 aa) fasta scores: E(): 2.9e-67, 39.74% id in 629 aa; heat-shock chaperone protein 1469207 3095261 BPSS1095 Burkholderia pseudomallei K96243 heat-shock chaperone protein YP_111108.1 1467360 D 272560 CDS YP_111109.1 53722124 3096225 1469211..1472018 1 NC_006351.1 Similar to Legionella pneumophila chaperone protein DnaK to codon 347 SWALL:DNAK_LEGPN (SWALL:O32482) (644 aa) fasta scores: E(): 3e-06, 25.72% id in 346 aa, and to the full-length Vibrio cholerae DnaK-related protein vc1373 SWALL:Q9KS86 (EMBL:AE004217) (948 aa) fasta scores: E(): 1.3e-84, 47.05% id in 952 aa, and to Vibrio cholerae DnaK-related protein vc1374 to codon 606 SWALL:Q9KS85 (EMBL:AE004217) (631 aa) fasta scores: E(): 1.6e-46, 40.6% id in 628 aa; chaperone heat-shock protein 1472018 3096225 BPSS1096 Burkholderia pseudomallei K96243 chaperone heat-shock protein YP_111109.1 1469211 D 272560 CDS YP_111110.1 53722125 3096226 complement(1472313..1473446) 1 NC_006351.1 Similar to Bacillus anthracis capsule biosynthesis protein CapA or pxo2-56 SWALL:CAPA_BACAN (SWALL:P19579) (411 aa) fasta scores: E(): 2.5e-08, 24.07% id in 324 aa, and to horizontally acquired Meloidogyne artiellia polyglutamate synthase ths SWALL:Q8T376 (EMBL:AJ310212) (361 aa) fasta scores: E(): 1.4e-79, 56.51% id in 361 aa, and to Mycobacterium tuberculosis hypothetical 41.5 kDa protein rv0574c or mtv039.12c or mt0602 SWALL:O53771 (EMBL:AL021942) (380 aa) fasta scores: E(): 1.4e-65, 50.98% id in 355 aa. Possible alternative translational start; capsule biosynthesis protein 1473446 3096226 BPSS1097 Burkholderia pseudomallei K96243 capsule biosynthesis protein YP_111110.1 1472313 R 272560 CDS YP_111111.1 53722126 3094929 complement(1474016..1474276) 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical protein r01197 or smc01759 SWALL:Q92QV2 (EMBL:AL591786) (72 aa) fasta scores: E(): 0.00011, 37.87% id in 66 aa; hypothetical protein 1474276 3094929 BPSS1098 Burkholderia pseudomallei K96243 hypothetical protein YP_111111.1 1474016 R 272560 CDS YP_111112.1 53722127 3097186 complement(1475705..1476328) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0198 or rs00630 SWALL:Q8Y2Y3 (EMBL:AL646058) (213 aa) fasta scores: E(): 6.9e-45, 56.28% id in 199 aa; hypothetical protein 1476328 3097186 BPSS1099 Burkholderia pseudomallei K96243 hypothetical protein YP_111112.1 1475705 R 272560 CDS YP_111113.1 53722128 3097187 complement(1476380..1478893) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O157:H7 cation transport ATPase MgtA or Mgt or CorB or b4242 or z5853 or ecs5219 SWALL:ATMA_ECOLI (SWALL:P39168) (898 aa) fasta scores: E(): 9.1e-46, 27.56% id in 849 aa, and to Methanobacterium thermoautotrophicum cation-transporting p-ATPase pacL mth1001 SWALL:O27082 (EMBL:AE000873) (844 aa) fasta scores: E(): 7.2e-64, 35.3% id in 830 aa, and to Streptomyces coelicolor transport ATPase sco2499 or scc121.02C SWALL:Q9L2I4 (EMBL:AL939112) (1472 aa) fasta scores: E(): 4.6e-48, 32.07% id in 876 aa; cation transport ATPase 1478893 3097187 BPSS1100 Burkholderia pseudomallei K96243 cation transport ATPase YP_111113.1 1476380 R 272560 CDS YP_111114.1 53722129 3095501 complement(1478991..1479470) 1 NC_006351.1 Similar to Ralstonia solanacearum signal peptide protein rsc1315 or rs02837 SWALL:Q8XZT0 (EMBL:AL646063) (141 aa) fasta scores: E(): 3.5e-08, 35.71% id in 140 aa; hypothetical protein 1479470 3095501 BPSS1101 Burkholderia pseudomallei K96243 hypothetical protein YP_111114.1 1478991 R 272560 CDS YP_111115.1 53722130 3096440 1480496..1481305 1 NC_006351.1 Similar to Streptococcus agalactiae hypothetical 25.7 kDa protein SWALL:O54084 (EMBL:Y12224) (228 aa) fasta scores: E(): 9.8e-09, 27.12% id in 188 aa, and to Streptomyces galilaeus AknG SWALL:Q9L546 (EMBL:AF257324) (286 aa) fasta scores: E(): 5e-08, 36% id in 150 aa, and to Streptomyces galilaeus AknG SWALL:Q8VWA8 (EMBL:AB008466) (286 aa) fasta scores: E(): 5e-08, 36% id in 150 aa; hypothetical protein 1481305 3096440 BPSS1102 Burkholderia pseudomallei K96243 hypothetical protein YP_111115.1 1480496 D 272560 CDS YP_111116.1 53722131 3096441 complement(1481559..1482989) 1 NC_006351.1 Similar to Paenibacillus thiaminolyticus thiaminase I precursor to codon 383 SWALL:THI1_PANTH (SWALL:P45741) (409 aa) fasta scores: E(): 1.3e-40, 35.84% id in 385 aa; periplasmic thiamine binding protein 1482989 3096441 BPSS1103 Burkholderia pseudomallei K96243 periplasmic thiamine binding protein YP_111116.1 1481559 R 272560 CDS YP_111117.1 53722132 3095063 complement(1483079..1483879) 1 NC_006351.1 Similar to Salmonella typhimurium phosphomethylpyrimidine kinase ThiD or stm2146 SWALL:THID_SALTY (SWALL:P55882) (266 aa) fasta scores: E(): 4.1e-47, 57.79% id in 263 aa, and to Salmonella typhi phosphomethylpyrimidine kinase ThiD or sty2375 SWALL:Q8Z5C9 (EMBL:AL627273) (266 aa) fasta scores: E(): 7.2e-47, 57.41% id in 263 aa, and to Escherichia coli O157:H7 phosphomethylpyrimidine kinase ThiD or z3267 or ecs2906 SWALL:Q8X7G5 (EMBL:AE005436) (266 aa) fasta scores: E(): 2.9e-46, 56.65% id in 263 aa; phosphomethylpyrimidine kinase 1483879 3095063 BPSS1104 Burkholderia pseudomallei K96243 phosphomethylpyrimidine kinase YP_111117.1 1483079 R 272560 CDS YP_111118.1 53722133 3097019 complement(1484107..1484847) 1 NC_006351.1 Similar to Streptomyces avermitilis C5-O-methyltransferase AveD SWALL:Q9S0N6 (EMBL:AB032524) (283 aa) fasta scores: E(): 9.3e-07, 38.28% id in 128 aa, and to Caulobacter crescentus methyltransferase, Cc1846 SWALL:Q9A780 (EMBL:AE005858) (243 aa) fasta scores: E(): 3.9e-08, 31.08% id in 222 aa, and to Nocardia aerocolonigenes methyltransferase RbmF SWALL:CAC93718 (EMBL:AF534707) (273 aa) fasta scores: E(): 3.3e-07, 39.49% id in 119 aa; methyltransferase 1484847 3097019 BPSS1105 Burkholderia pseudomallei K96243 methyltransferase YP_111118.1 1484107 R 272560 CDS YP_111119.1 53722134 3097020 complement(1484863..1485852) 1 NC_006351.1 Similar to Bacteriophage SP01 deoxyuridylate hydroxymethyltransferase 29 SWALL:DUHM_BPSP1 (SWALL:P31654) (383 aa) fasta scores: E(): 6.8e-12, 30.04% id in 223 aa, and to Rhizobium loti thymidylate synthase ThyA or mll1467 SWALL:Q98KH9 (EMBL:AP002997) (264 aa) fasta scores: E(): 8e-08, 24.05% id in 237 aa, and to Agrobacterium tumefaciens thymidylate synthase ThyA or atu2047 or agr_c_3709 SWALL:Q8UDS3 (EMBL:AE009155) (279 aa) fasta scores: E(): 6.8e-07, 23.72% id in 236 aa; thymidylate synthase 1485852 3097020 BPSS1106 Burkholderia pseudomallei K96243 thymidylate synthase YP_111119.1 1484863 R 272560 CDS YP_111120.1 53722135 3096092 complement(1485854..1486309) 1 NC_006351.1 hypothetical protein 1486309 3096092 BPSS1107 Burkholderia pseudomallei K96243 hypothetical protein YP_111120.1 1485854 R 272560 CDS YP_111121.1 53722136 3095295 complement(1486306..1486869) 1 NC_006351.1 Similar to Methanococcus jannaschii ADP-ribose pyrophosphatase NudF or mj1149 SWALL:ADPP_METJA (SWALL:Q58549) (169 aa) fasta scores: E(): 4.5e-07, 33.33% id in 123 aa, and to Aeropyrum pernix hypothetical protein Ape2080 ape2080 SWALL:Q9YA58 (EMBL:AP000063) (175 aa) fasta scores: E(): 2.9e-11, 42.4% id in 125 aa, and to Methanopyrus kandleri ADP-ribose pyrophosphatase mk1028 SWALL:Q8TWK5 (EMBL:AE010391) (154 aa) fasta scores: E(): 2.7e-10, 46.15% id in 117 aa; alternative start site at codon 30; NUDIX/MutT family protein 1486869 3095295 BPSS1108 Burkholderia pseudomallei K96243 NUDIX/MutT family protein YP_111121.1 1486306 R 272560 CDS YP_111122.1 53722137 3095296 1487368..1488162 1 NC_006351.1 Similar to the C-terminal regions of Arabidopsis thaliana (mouse ear cress) phosphoethanolamine N-methyltransferase 3 NMT or at1g73600 or f6d5.1 or f25p22.1 PEM3_ARATH SWALL:PEM3_ARATH (SWALL:Q9C6B9) (490 aa) fasta scores: E(): 2.6e-24, 33.59% id in 259 aa, and Arabidopsis thaliana phosphoethanolamine N-methyltransferase 2 NMT2 or at1g48600 or t1n15_20 or t1n15.22/t1n15.23; methyltransferase 1488162 3095296 BPSS1109 Burkholderia pseudomallei K96243 methyltransferase YP_111122.1 1487368 D 272560 CDS YP_111123.1 53722138 3094900 1488229..1489377 1 NC_006351.1 Similar to Pseudomonas sp. gamma-butyrobetaine,2-oxoglutarate dioxygenase SWALL:BODG_PSESK (SWALL:P80193) (383 aa) fasta scores: E(): 5.2e-20, 27.68% id in 372 aa, and to Rattus norvegicus gamma-butyrobetaine,2-oxoglutarate dioxygenase Bbox1 or BbH SWALL:BODG_RAT (SWALL:Q9QZU7) (387 aa) fasta scores: E(): 1.2e-21, 28.14% id in 366 aa, and to Drosophila melanogaster eg:bacr7a4.9 protein eg:bacr7a4.9 or cg14630 SWALL:Q9NF72 (EMBL:AL109630) (504 aa) fasta scores: E(): 3.5e-21, 29.03% id in 372 aa; gamma-butyrobetaine,2-oxoglutarate dioxygenase 1489377 3094900 BPSS1110 Burkholderia pseudomallei K96243 gamma-butyrobetaine,2-oxoglutarate dioxygenase YP_111123.1 1488229 D 272560 CDS YP_111124.1 53722139 3097217 complement(1489574..1490410) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein Mlr7896 SWALL:Q984Q1 (EMBL:AP003012) (278 aa) fasta scores: E(): 8.9e-49, 54.31% id in 278 aa, and to Salmonella typhimurium integral membrane protein stm3796A SWALL:Q8ZL13 (EMBL:AE008877) (286 aa) fasta scores: E(): 2.1e-29, 39.27% id in 275 aa, and to Streptomyces coelicolor integral membrane protein sco3164 or sce87.15C SWALL:Q9RKC3 (EMBL:AL939115) (281 aa) fasta scores: E(): 1e-26, 37.9% id in 277 aa; hypothetical protein 1490410 3097217 BPSS1111 Burkholderia pseudomallei K96243 hypothetical protein YP_111124.1 1489574 R 272560 CDS YP_111125.1 53722140 3097218 1491119..1492609 1 NC_006351.1 Similar to Pseudomonas aeruginosa arginine/ornithine antiporter ArcD or pa5170 SWALL:ARCD_PSEAE (SWALL:P18275) (482 aa) fasta scores: E(): 5.8e-95, 55.88% id in 476 aa, and to Clostridium perfringens arginine/ornithine antiporter ArcD or cpe0170 SWALL:ARCD_CLOPE (SWALL:Q46170) (478 aa) fasta scores: E(): 8.7e-86, 50.1% id in 471 aa, and to Pseudomonas aeruginosa probable amino acid permease pa1194 SWALL:Q9I4E4 (EMBL:AE004549) (472 aa) fasta scores: E(): 2.6e-81, 51.69% id in 472 aa. N-terminus is extended in comparison to orthologues. Possible alternative start site at codon 23; amino acid permease 1492609 3097218 BPSS1112 Burkholderia pseudomallei K96243 amino acid permease YP_111125.1 1491119 D 272560 CDS YP_111126.1 53722141 3095754 1492837..1493526 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0998 or rs02331 SWALL:Q8XR63 (EMBL:AL646082) (197 aa) fasta scores: E(): 2.7e-37, 56.06% id in 198 aa, and to Xanthomonas axonopodis integral membrane protein xac2748 SWALL:AAM37593 (EMBL:AE011915) (253 aa) fasta scores: E(): 1.5e-26, 43.11% id in 218 aa, and to Xanthomonas campestris integral membrane protein xcc2577 SWALL:AAM41849 (EMBL:AE012370) (228 aa) fasta scores: E(): 2e-25, 43.54% id in 209 aa. Possible alternative translational start site; peptidase 1493526 3095754 BPSS1113 Burkholderia pseudomallei K96243 peptidase YP_111126.1 1492837 D 272560 CDS YP_111127.1 53722142 3095258 complement(1493693..1495693) 1 NC_006351.1 Similar to Bradyrhizobium japonicum metalloprotease FtsH SWALL:Q9XBG5 (EMBL:AJ243808) (640 aa) fasta scores: E(): 2e-93, 46.29% id in 635 aa, and to Anabaena sp. cell division protein FtsH or all4936 SWALL:Q8YMJ7 (EMBL:AP003598) (645 aa) fasta scores: E(): 1.3e-97, 48.94% id in 615 aa, and to Chlorobium tepidum cell division protein FtsH FtsH-1 or ct0127 SWALL:AAM71375 (EMBL:AE012791) (706 aa) fasta scores: E(): 5.9e-96, 47.29% id in 666 aa, and to Synechocystis sp. cell division protein FtsH homolog 3 sll1463 SWALL:FTH3_SYNY3 (SWALL:P73437) (628 aa) fasta scores: E(): 5.4e-94, 48.44% id in 611 aa; FtsH-2 protease 1495693 ftsH 3095258 ftsH Burkholderia pseudomallei K96243 FtsH-2 protease YP_111127.1 1493693 R 272560 CDS YP_111128.1 53722143 3096397 complement(1495747..1496259) 1 NC_006351.1 hypothetical protein 1496259 3096397 BPSS1115 Burkholderia pseudomallei K96243 hypothetical protein YP_111128.1 1495747 R 272560 CDS YP_111129.1 53722144 3096398 1497078..1498832 1 NC_006351.1 Similar to Mycobacterium tuberculosis hypothetical protein rv2913c or mt2981 or mtcy274.45c or mtcy338.01C SWALL:YT13_MYCTU (SWALL:Q10830) (611 aa) fasta scores: E(): 1.6e-136, 58.19% id in 586 aa, and to Caulobacter crescentus hypothetical protein Cc3460 SWALL:Q9A2U6 (EMBL:AE006004) (581 aa) fasta scores: E(): 1.6e-24, 28.21% id in 599 aa, and to Pyrococcus abyssi D-aminoacylase NdaD or pab0090 SWALL:Q9V2D3 (EMBL:AJ248283) (526 aa) fasta scores: E(): 3.8e-09, 26.06% id in 541 aa; possible alternative start at codon 15; hypothetical protein 1498832 3096398 BPSS1116 Burkholderia pseudomallei K96243 hypothetical protein YP_111129.1 1497078 D 272560 CDS YP_111130.1 53722145 3095166 complement(1498963..1499634) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein Ypo4077 SWALL:Q8Z9W2 (EMBL:AJ414160) (214 aa) fasta scores: E(): 2.3e-38, 52.58% id in 213 aa, and to Vibrio cholerae hypothetical protein Vc2666 SWALL:Q9KNR5 (EMBL:AE004332) (205 aa) fasta scores: E(): 1.6e-27, 42.5% id in 200 aa, and to Anabaena sp. hypothetical protein All2491 SWALL:Q8YU63 (EMBL:AP003589) (227 aa) fasta scores: E(): 1.6e-13, 29.68% id in 219 aa; hypothetical protein 1499634 3095166 BPSS1117 Burkholderia pseudomallei K96243 hypothetical protein YP_111130.1 1498963 R 272560 CDS YP_111131.1 53722146 3094898 1499785..1500882 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable RND efflux membrane fusion protein precursor pa4206 SWALL:Q9HWH5 (EMBL:AE004837) (370 aa) fasta scores: E(): 9.3e-39, 39.07% id in 366 aa, and to Vibrio cholerae hypothetical protein Vc0165 SWALL:Q9KVI1 (EMBL:AE004106) (368 aa) fasta scores: E(): 3.1e-34, 35.21% id in 355 aa, and to Rhizobium loti RND efflux membrane fusion protein precursor mlr3647 SWALL:Q98FR7 (EMBL:AP003002) (465 aa) fasta scores: E(): 2.4e-29, 32.15% id in 367 aa; HlyD family protein 1500882 3094898 BPSS1118 Burkholderia pseudomallei K96243 HlyD family protein YP_111131.1 1499785 D 272560 CDS YP_111132.1 53722147 3094899 1500933..1503989 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable RND efflux transporter pa4207 SWALL:Q9HWH4 (EMBL:AE004837) (1029 aa) fasta scores: E(): 1.2e-213, 58.8% id in 1017 aa, and to Pseudomonas aeruginosa probable RND efflux transporter pa4375 SWALL:Q9HW27 (EMBL:AE004853) (1018 aa) fasta scores: E(): 1.9e-184, 51.99% id in 1002 aa. CDS is shorter at the N-terminus in comparison to orthologues.; RND efflux transporter 1503989 3094899 BPSS1119 Burkholderia pseudomallei K96243 RND efflux transporter YP_111132.1 1500933 D 272560 CDS YP_111133.1 53722148 3094890 1504124..1505662 1 NC_006351.1 Similar to Pseudomonas putida efflux protein TtgC SWALL:Q9WWZ8 (EMBL:AF031417) (484 aa) fasta scores: E(): 9.1e-76, 49.68% id in 483 aa, and to Pseudomonas aeruginosa outer membrane protein OprM precursor or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 3.8e-85, 56.19% id in 468 aa, and to Xanthomonas axonopodis outer membrane protein OprM or xac2842 SWALL:AAM37687 (EMBL:AE011925) (503 aa) fasta scores: E(): 5.4e-84, 53.18% id in 502 aa; outer membrane efflux protein 1505662 3094890 BPSS1120 Burkholderia pseudomallei K96243 outer membrane efflux protein YP_111133.1 1504124 D 272560 CDS YP_111134.1 53722149 3095553 1505992..1506636 1 NC_006351.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 1506636 ribA 3095553 ribA Burkholderia pseudomallei K96243 GTP cyclohydrolase II YP_111134.1 1505992 D 272560 CDS YP_111135.1 53722150 3095554 1506633..1508330 1 NC_006351.1 Similar to Pseudomonas glumae WD-repeat protein ToxC SWALL:Q8RS37 (EMBL:AB040403) (563 aa) fasta scores: E(): 6.3e-132, 63.74% id in 571 aa, and to Streptomyces coelicolor repetative protein sco2692 or scc61a.13 SWALL:Q9KYI0 (EMBL:AL939113) (626 aa) fasta scores: E(): 3.5e-15, 28.92% id in 560 aa, and to Anabaena sp. WD-repeat protein all4834 from codon 950 of Q8YMU3 SWALL:Q8YMU3 (EMBL:AP003597) (1551 aa) fasta scores: E(): 4.3e-13, 24.11% id in 593 aa; hypothetical protein 1508330 3095554 BPSS1122 Burkholderia pseudomallei K96243 hypothetical protein YP_111135.1 1506633 D 272560 CDS YP_111136.1 53722151 3096134 1508327..1509037 1 NC_006351.1 Similar to Bacillus halodurans hypothetical protein Bh2058 SWALL:Q9KB70 (EMBL:AP001514) (241 aa) fasta scores: E(): 8.5e-06, 29.63% id in 162 aa; hypothetical protein 1509037 3096134 BPSS1123 Burkholderia pseudomallei K96243 hypothetical protein YP_111136.1 1508327 D 272560 CDS YP_111137.1 53722152 3096433 1509034..1510017 1 NC_006351.1 Similar to Pseudomonas glumae trp-2 toxD SWALL:Q8RS36 (EMBL:AB040403) (325 aa) fasta scores: E(): 1.4e-88, 68.71% id in 326 aa, and to Streptomyces coelicolor hypothetical protein sco2695 or scc61a.16 SWALL:Q9KYH7 (EMBL:AL939113) (256 aa) fasta scores: E(): 5.4e-22, 42.85% id in 252 aa, and to Chlamydia trachomatis serine/threonine protein kinase ct145 SWALL:O84147 (EMBL:AE001288) (614 aa) fasta scores: E(): 1.2e-13, 34.49% id in 258 aa; hypothetical protein 1510017 3096433 BPSS1124 Burkholderia pseudomallei K96243 hypothetical protein YP_111137.1 1509034 D 272560 CDS YP_111138.1 53722153 3096434 1510127..1511314 1 NC_006351.1 Similar to Escherichia coli riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase RibD or RibG or b0414 SWALL:RIBD_ECOLI (SWALL:P25539) (367 aa) fasta scores: E(): 1.8e-33, 39.88% id in 336 aa, and to Xanthomonas campestris riboflavin-specific deaminase/5-amino-6-uracil reductase RibD or xcc0693 SWALL:AAM40009 (EMBL:AE012168) (364 aa) fasta scores: E(): 4.6e-40, 45.05% id in 384 aa, and to Pseudomonas aeruginosa riboflavin-specific deaminase/reductase RibD or pa4056 SWALL:Q9HWX2 (EMBL:AE004822) (373 aa) fasta scores: E(): 5.4e-40, 44.11% id in 365 aa; riboflavin biosynthesis protein 1511314 3096434 BPSS1125 Burkholderia pseudomallei K96243 riboflavin biosynthesis protein YP_111138.1 1510127 D 272560 CDS YP_111139.1 53722154 3096556 1511374..1512426 1 NC_006351.1 Similar to Streptomyces glaucescens tetracenomycin polyketide synthesis 8-O-methyl transferase TcmO SWALL:TCMO_STRGA (SWALL:P39896) (339 aa) fasta scores: E(): 2.8e-13, 26.74% id in 329 aa, and to Streptomyces sp. JP95 methyltransferase GrhL SWALL:AAM33664 (EMBL:AF509565) (343 aa) fasta scores: E(): 2.1e-17, 30.14% id in 355 aa, and to Streptomyces argillaceus O-methyltransferase MtmMI SWALL:Q9R6R8 (EMBL:AF077869) (345 aa) fasta scores: E(): 4.8e-15, 30.47% id in 292 aa; O-methyltransferase 1512426 3096556 BPSS1126 Burkholderia pseudomallei K96243 O-methyltransferase YP_111139.1 1511374 D 272560 CDS YP_111140.1 53722155 3096232 1512429..1513292 1 NC_006351.1 glyoxylase/bleomycin resistance protein/dioxygenase superfamily protein 1513292 3096232 BPSS1127 Burkholderia pseudomallei K96243 glyoxylase/bleomycin resistance protein/dioxygenase superfamily protein YP_111140.1 1512429 D 272560 CDS YP_111141.1 53722156 3096233 1513324..1514727 1 NC_006351.1 Similar to Burkholderia cepacia major facilitator superfamily transporter homolog SWALL:Q9RPH2 (EMBL:AF158699) (531 aa) fasta scores: E(): 5.1e-21, 27.65% id in 452 aa, and to Ralstonia solanacearum transport transmembrane protein rsc2324 or rs01224 SWALL:Q8XWZ4 (EMBL:AL646069) (475 aa) fasta scores: E(): 1.2e-69, 47.34% id in 471 aa, and to Mycobacterium tuberculosis hypothetical 47.7 kDa protein rv1634 or mtcy01b2.26 or mt1670 SWALL:O06151 (EMBL:Z95554) (471 aa) fasta scores: E(): 4.2e-47, 39.22% id in 464 aa; major facilitator transporter 1514727 3096233 BPSS1128 Burkholderia pseudomallei K96243 major facilitator transporter YP_111141.1 1513324 D 272560 CDS YP_111142.1 53722157 3097249 1514792..1515292 1 NC_006351.1 Limited similarity to Yersinia pestis membrane protein ypo0899 SWALL:Q8ZHJ3 (EMBL:AJ414145) (165 aa) fasta scores: E(): 0.0034, 29.63% id in 135 aa; hypothetical protein 1515292 3097249 BPSS1129 Burkholderia pseudomallei K96243 hypothetical protein YP_111142.1 1514792 D 272560 CDS YP_111143.1 53722158 3096373 1515311..1516720 1 NC_006351.1 hypothetical protein 1516720 3096373 BPSS1130 Burkholderia pseudomallei K96243 hypothetical protein YP_111143.1 1515311 D 272560 CDS YP_111144.1 53722159 3096374 complement(1516928..1517731) 1 NC_006351.1 Similar to Vibrio cholerae transcriptional regulator, LuxR family, from codon 69 of vca1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 3.5e-33, 41.41% id in 227 aa; LuxR family transcriptional regulator 1517731 3096374 BPSS1131 Burkholderia pseudomallei K96243 LuxR family transcriptional regulator YP_111144.1 1516928 R 272560 CDS YP_111145.1 53722160 3096492 complement(1518113..1518532) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa2120 SWALL:Q9I1Z5 (EMBL:AE004639) (142 aa) fasta scores: E(): 2.6e-28, 59.23% id in 130 aa, and to Ralstonia solanacearum hypothetical protein rsp0317 or rs05451 SWALL:Q8XT00 (EMBL:AL646078) (147 aa) fasta scores: E(): 4.5e-26, 59.09% id in 132 aa, and to Streptomyces coelicolor hypothetical protein sco7053 or sc4g1.19C SWALL:Q9FC31 (EMBL:AL939130) (139 aa) fasta scores: E(): 1e-11, 38.09% id in 126 aa; hypothetical protein 1518532 3096492 BPSS1132 Burkholderia pseudomallei K96243 hypothetical protein YP_111145.1 1518113 R 272560 CDS YP_111146.1 53722161 3095109 complement(1518650..1520671) 1 NC_006351.1 Similar to Escherichia coli 2,4-dienoyl-CoA reductase [NADPH] FadH or b3081 SWALL:FADH_ECOLI (SWALL:P42593) (671 aa) fasta scores: E(): 8.6e-165, 64.33% id in 673 aa, and to Streptomyces coelicolor 2,4-dienoyl-CoA reductase FadH or sco7066 or sc4g1.32 SWALL:Q9FC18 (EMBL:AL939130) (671 aa) fasta scores: E(): 1.8e-183, 71.32% id in 673 aa, and to Pseudomonas aeruginosa 2,4-dienoyl-Coareductase FadH1 or pa3092 SWALL:Q9HZB6 (EMBL:AE004733) (679 aa) fasta scores: E(): 6.1e-177, 68.64% id in 673 aa; possible alternative start site at codon 12; 2,4-dienoyl-CoA reductase 1520671 fadH 3095109 fadH Burkholderia pseudomallei K96243 2,4-dienoyl-CoA reductase YP_111146.1 1518650 R 272560 CDS YP_111147.1 53722162 3095702 1520820..1521377 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein sco7067 or sc4g1.33 SWALL:Q9FC17 (EMBL:AL939130) (183 aa) fasta scores: E(): 3.5e-36, 60.23% id in 171 aa, and to Ralstonia solanacearum hypothetical protein rsp0309 or rs05461 SWALL:Q8XT08 (EMBL:AL646077) (178 aa) fasta scores: E(): 1.6e-31, 57.23% id in 159 aa, and to Anabaena sp. hypothetical protein All4972 SWALL:Q8YMG2 (EMBL:AP003598) (179 aa) fasta scores: E(): 7.1e-18, 35.75% id in 179 aa; PadR-like family regulatory protein 1521377 3095702 BPSS1134 Burkholderia pseudomallei K96243 PadR-like family regulatory protein YP_111147.1 1520820 D 272560 CDS YP_111148.1 53722163 3095703 1521595..1522425 1 NC_006351.1 Similar to Salmonella typhimurium hydroxyethylthiazole kinase ThiM or stm2147 SWALL:THIM_SALTY (SWALL:P55883) (265 aa) fasta scores: E(): 1.2e-23, 44.53% id in 238 aa, and to Leptospira interrogans hydroxyethylthiazole kinase ThiM or la3365 SWALL:AAN50563 (EMBL:AE011496) (265 aa) fasta scores: E(): 8.7e-30, 43.65% id in 252 aa, and to Shigella flexneri hydoxyethylthiazole kinase ThiM or sf2166 SWALL:AAN43697 (EMBL:AE015232) (262 aa) fasta scores: E(): 4.4e-24, 42.56% id in 242 aa; hydroxyethylthioazole kinase 1522425 3095703 BPSS1135 Burkholderia pseudomallei K96243 hydroxyethylthioazole kinase YP_111148.1 1521595 D 272560 CDS YP_111149.1 53722164 3095072 1522944..1523807 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0187 SWALL:Q9I6U7 (EMBL:AE004456) (271 aa) fasta scores: E(): 1.9e-40, 46.41% id in 265 aa; hypothetical protein 1523807 3095072 BPSS1136 Burkholderia pseudomallei K96243 hypothetical protein YP_111149.1 1522944 D 272560 CDS YP_111150.1 53722165 3094927 1523922..1524809 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0188 SWALL:Q9I6U6 (EMBL:AE004456) (293 aa) fasta scores: E(): 2.2e-48, 48.43% id in 287 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1735 SWALL:Q9I302 (EMBL:AE004599) (295 aa) fasta scores: E(): 2e-29, 37.2% id in 293 aa, and to Vibrio cholerae hypothetical protein Vc1229 vc1229 SWALL:Q9KSM7 (EMBL:AE004202) (291 aa) fasta scores: E(): 5.3e-16, 30.31% id in 287 aa; hypothetical protein 1524809 3094927 BPSS1137 Burkholderia pseudomallei K96243 hypothetical protein YP_111150.1 1523922 D 272560 CDS YP_111151.1 53722166 3094928 complement(1525069..1525698) 1 NC_006351.1 Similar to Neisseria meningitidis hypothetical protein Nmb1992 nmb1992 SWALL:Q9JXK9 (EMBL:AE002548) (208 aa) fasta scores: E(): 5.7e-27, 44.82% id in 203 aa, and to Neisseria meningitidis hypothetical protein Nma0449 nma0449 SWALL:Q9JWC2 (EMBL:AL162753) (193 aa) fasta scores: E(): 5.5e-23, 51.8% id in 166 aa; hypothetical protein 1525698 3094928 BPSS1138 Burkholderia pseudomallei K96243 hypothetical protein YP_111151.1 1525069 R 272560 CDS YP_111152.1 53722167 3095668 complement(1525846..1526103) 1 NC_006351.1 Similar to Alcaligenes eutrophus hypothetical protein SWALL:Q7WXA3 (EMBL:AY305378) (99 aa) fasta scores: E(): 2.2e-15, 64.28% id in 70 aa; hypothetical protein 1526103 3095668 BPSS1139 Burkholderia pseudomallei K96243 hypothetical protein YP_111152.1 1525846 R 272560 CDS YP_111153.1 53722168 3096954 1526486..1527448 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein from codon 175 of rsp1561 or rs02117 SWALL:Q8XPS7 (EMBL:AL646085) (151 aa) fasta scores: E(): 1.8e-11, 39.18% id in 148 aa, and to Ralstonia solanacearum hypothetical protein from codon 175 of rsc0184 or rs00615 SWALL:Q8Y2Z7 (EMBL:AL646057) (166 aa) fasta scores: E(): 1.7e-09, 34.5% id in 142 aa, and to Pseudomonas aeruginosa hypothetical protein from codon 175 of Pa3309 SWALL:Q9HYT5 (EMBL:AE004753) (151 aa) fasta scores: E(): 3.7e-09, 35.61% id in 146 aa, and to Corynebacterium glutamicum universal stress protein UspA and related nucleotide-binding proteins cgl2943 SWALL:BAC00337 (EMBL:AP005283) (301 aa) fasta scores: E(): 2.2e-08, 28.3% id in 318 aa; universal stress family protein 1527448 3096954 BPSS1140 Burkholderia pseudomallei K96243 universal stress family protein YP_111153.1 1526486 D 272560 CDS YP_111154.1 53722169 3096955 complement(1527667..1528083) 1 NC_006351.1 hypothetical protein 1528083 3096955 BPSS1141 Burkholderia pseudomallei K96243 hypothetical protein YP_111154.1 1527667 R 272560 CDS YP_111155.1 53722170 3094973 complement(1528514..1529032) 1 NC_006351.1 Similar to Methanobacterium thermoautotrophicum hydrogenase small subunit EhaN SWALL:Q9UXP5 (EMBL:AJ243655) (148 aa) fasta scores: E(): 4.7e-17, 43.44% id in 122 aa, and to Methanosarcina mazei formate hydrogenlyase subunit 7 mm1064 SWALL:AAM30760 (EMBL:AE013333) (170 aa) fasta scores: E(): 2.7e-26, 54.96% id in 131 aa, and to Methanosarcina acetivorans hydrogenase-3, subunit G ma4373 SWALL:Q8THY5 (EMBL:AE011156) (170 aa) fasta scores: E(): 5.6e-26, 52.48% id in 141 aa; hydrogenase/oxidoreductase subunit 1529032 3094973 BPSS1142 Burkholderia pseudomallei K96243 hydrogenase/oxidoreductase subunit YP_111155.1 1528514 R 272560 CDS YP_111156.1 53722171 3095226 complement(1529032..1530687) 1 NC_006351.1 Similar to Escherichia coli formate hydrogenlyase subunit 5 precursor HycE or HevE or b2721 SWALL:HYCE_ECOLI (SWALL:P16431) (569 aa) fasta scores: E(): 2.5e-31, 31.25% id in 464 aa, and to Methanosarcina acetivorans hydrogenase-3, subunit E ma4372 SWALL:Q8THY6 (EMBL:AE011156) (545 aa) fasta scores: E(): 9.1e-42, 38.47% id in 473 aa, and to Mycobacterium tuberculosis probable formate hydrogenlyase cy251.05 rv0087 or mtcy251.05 SWALL:Q10884 (EMBL:Z74410) (492 aa) fasta scores: E(): 1.4e-39, 42.22% id in 450 aa; formate hydrogenlyase/hydrogenase/NADH dehydrogenase subunit 1530687 3095226 BPSS1143 Burkholderia pseudomallei K96243 formate hydrogenlyase/hydrogenase/NADH dehydrogenase subunit YP_111156.1 1529032 R 272560 CDS YP_111157.1 53722172 3095227 complement(1530760..1532220) 1 NC_006351.1 Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase 4 subunit F 1532220 3095227 BPSS1144 Burkholderia pseudomallei K96243 hydrogenase 4 subunit F YP_111157.1 1530760 R 272560 CDS YP_111158.1 53722173 3095426 complement(1532213..1532872) 1 NC_006351.1 Similar to Mycobacterium tuberculosis hypothetical protein rv0085 or mt0092 or mtcy251.03 SWALL:Y085_MYCTU (SWALL:Q10882) (220 aa) fasta scores: E(): 4e-18, 32.07% id in 212 aa, and to Thermoanaerobacter tengcongensis hydrogenase 4 membrane subunit tte1704 SWALL:Q8R9B2 (EMBL:AE013124) (204 aa) fasta scores: E(): 5.4e-11, 25% id in 204 aa, and to Escherichia coli, and Escherichia coli O157:H7 hydrogenase-4 component E HyfE or b2485 or z3745 or ecs3347 SWALL:HYFE_ECOLI (SWALL:P77524) (216 aa) fasta scores: E(): 2.5e-09, 25.58% id in 215 aa; hypothetical protein 1532872 3095426 BPSS1145 Burkholderia pseudomallei K96243 hypothetical protein YP_111158.1 1532213 R 272560 CDS YP_111159.1 53722174 3096915 complement(1532873..1533823) 1 NC_006351.1 Similar to Escherichia coli formate hydrogenlyase subunit 4 HycD or HevD or b2722 SWALL:HYCD_ECOLI (SWALL:P16430) (307 aa) fasta scores: E(): 2.6e-27, 33.65% id in 306 aa. Almost identical to the previously sequenced Burkholderia pseudomallei formate hydrogenlyase subunit 4 SWALL:Q9ALX9 (EMBL:AF335723) (316 aa) fasta scores: E(): 2.9e-114, 98.73% id in 316 aa; formate hydrogenlyase subunit 4 1533823 3096915 BPSS1146 Burkholderia pseudomallei K96243 formate hydrogenlyase subunit 4 YP_111159.1 1532873 R 272560 CDS YP_111160.1 53722175 3096916 complement(1533817..1535823) 1 NC_006351.1 Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase 4 subunit B 1535823 3096916 BPSS1147 Burkholderia pseudomallei K96243 hydrogenase 4 subunit B YP_111160.1 1533817 R 272560 CDS YP_111161.1 53722176 3096817 1536182..1536955 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0353 or rs00757 SWALL:Q8XSW4 (EMBL:AL646078) (247 aa) fasta scores: E(): 5.1e-58, 63.74% id in 251 aa, and to Xanthomonas axonopodis hypothetical protein Xac1754 SWALL:AAM36618 (EMBL:AE011807) (233 aa) fasta scores: E(): 2.6e-06, 33.47% id in 230 aa, and to Ralstonia solanacearum permease transmembrane protein rsc0238 or rs00670 SWALL:Q8Y2U4 (EMBL:AL646058) (236 aa) fasta scores: E(): 3.5e-06, 31.53% id in 222 aa; hypothetical protein 1536955 3096817 BPSS1148 Burkholderia pseudomallei K96243 hypothetical protein YP_111161.1 1536182 D 272560 CDS YP_111162.1 53722177 3094963 1537182..1537679 1 NC_006351.1 hypothetical protein 1537679 3094963 BPSS1149 Burkholderia pseudomallei K96243 hypothetical protein YP_111162.1 1537182 D 272560 CDS YP_111163.1 53722178 3094964 1537737..1537997 1 NC_006351.1 Similar to Alcaligenes eutrophus phosphocarrier protein Hpr phbH SWALL:PTHP_ALCEU (SWALL:P23537) (89 aa) fasta scores: E(): 4.2e-05, 39.13% id in 69 aa, and to Ralstonia solanacearum probable phosphocarrier protein Hpr PstH or rsc0347 or rs03314 SWALL:Q8Y2I9 (EMBL:AL646058) (89 aa) fasta scores: E(): 9.4e-05, 38.37% id in 86 aa; phosphocarrier protein 1537997 3094964 BPSS1150 Burkholderia pseudomallei K96243 phosphocarrier protein YP_111163.1 1537737 D 272560 CDS YP_111164.1 53722179 3095263 1537994..1538848 1 NC_006351.1 Similar to Pseudomonas aeruginosa spermidine synthase SpeE or pa1687 SWALL:SPEE_PSEAE (SWALL:Q9X6R0) (286 aa) fasta scores: E(): 1.9e-06, 27.95% id in 254 aa, and to Xanthomonas campestris transferase xcc1548 SWALL:AAM40843 (EMBL:AE012255) (247 aa) fasta scores: E(): 1e-24, 43.19% id in 213 aa, and to Neisseria meningitidis transferase nma1087 or nmb0869 SWALL:Q9JQL8 (EMBL:AL162755) (263 aa) fasta scores: E(): 1.7e-20, 34.15% id in 243 aa; spermidine synthase 1538848 3095263 BPSS1151 Burkholderia pseudomallei K96243 spermidine synthase YP_111164.1 1537994 D 272560 CDS YP_111165.1 53722180 3095073 1538955..1539173 1 NC_006351.1 CopG family transcriptional regulator 1539173 3095073 BPSS1152 Burkholderia pseudomallei K96243 CopG family transcriptional regulator YP_111165.1 1538955 D 272560 CDS YP_111166.1 53722181 3095074 1539214..1539540 1 NC_006351.1 hypothetical protein 1539540 3095074 BPSS1153 Burkholderia pseudomallei K96243 hypothetical protein YP_111166.1 1539214 D 272560 CDS YP_111167.1 53722182 3095405 complement(1539545..1540819) 1 NC_006351.1 Similar to Paracoccus pantotrophus nitrate/nitrite transporter NarK SWALL:Q93PW1 (EMBL:AF295359) (905 aa) fasta scores: E(): 4.5e-63, 41.2% id in 415 aa, and to Pseudomonas fluorescens nitrate/nitrite transporter narD SWALL:Q9F0X9 (EMBL:AF197465) (421 aa) fasta scores: E(): 1.6e-89, 56.46% id in 402 aa, and to Ralstonia solanacearum nitrite/nitrate transporter transmembrane protein NarK1 or rsp0972 or rs02304 SWALL:Q8XR87 (EMBL:AL646082) (437 aa) fasta scores: E(): 4.3e-85, 53.44% id in 421 aa, and to Pseudomonas aeruginosa nitrate extrusion protein NarK1 or pa3877 SWALL:O54041 (EMBL:Y15252) (431 aa) fasta scores: E(): 6.4e-71, 44.36% id in 408 aa; nitrate/nitrite transporter 1540819 narK 3095405 narK Burkholderia pseudomallei K96243 nitrate/nitrite transporter YP_111167.1 1539545 R 272560 CDS YP_111168.1 53722183 3096895 complement(1540844..1541641) 1 NC_006351.1 Similar to Azotobacter vinelandii protein NifM SWALL:NIFM_AZOVI (SWALL:P14890) (292 aa) fasta scores: E(): 1.9e-09, 29.71% id in 212 aa, and to Pseudomonas aeruginosa probable peptidyl-prolyl cis-trans isomerase, Ppic-type pa3871 SWALL:Q9HXD5 (EMBL:AE004804) (272 aa) fasta scores: E(): 1.5e-23, 36.33% id in 267 aa, and to Brucella melitensis peptidyl-prolyl cis-trans isomerase C bmeii0954 SWALL:Q8YBE6 (EMBL:AE009728) (271 aa) fasta scores: E(): 4.7e-23, 43.07% id in 260 aa, and to Pseudomonas aeruginosa NifM protein SWALL:O54047 (EMBL:Y15252) (250 aa) fasta scores: E(): 7e-22, 36.94% id in 249 aa; rotamase/peptidyl-prolyl cis-trans isomerase 1541641 3096895 BPSS1155 Burkholderia pseudomallei K96243 rotamase/peptidyl-prolyl cis-trans isomerase YP_111168.1 1540844 R 272560 CDS YP_111169.1 53722184 3095414 complement(1541661..1542344) 1 NC_006351.1 Similar to Escherichia coli respiratory nitrate reductase 1 gamma chain NarI or ChlI or b1227 SWALL:NARI_ECOLI (SWALL:P11350) (225 aa) fasta scores: E(): 9.9e-38, 46.42% id in 224 aa, and to Brucella melitensis respiratory nitrate reductase 2 gamma chain bmeii0953 SWALL:Q8YBE7 (EMBL:AE009728) (241 aa) fasta scores: E(): 6e-43, 51.52% id in 229 aa, and to Brucella suis respiratory nitrate reductase, gamma subunit NarI or bra0296 SWALL:AAN33496 (EMBL:AE014530) (241 aa) fasta scores: E(): 6.9e-43, 51.52% id in 229 aa, and to Salmonella typhimurium nitrate reductase 1, cytochrome b NarI or stm1761 SWALL:Q8ZP40 (EMBL:AE008778) (225 aa) fasta scores: E(): 3.5e-38, 46.42% id in 224 aa; respiratory nitrate reductase subunit 1542344 narI 3095414 narI Burkholderia pseudomallei K96243 respiratory nitrate reductase subunit YP_111169.1 1541661 R 272560 CDS YP_111170.1 53722185 3095404 complement(1542512..1543201) 1 NC_006351.1 Similar to Paracoccus denitrificans respiratory nitrate reductase subunit protein NarJ SWALL:Q56356 (EMBL:Z26255) (228 aa) fasta scores: E(): 9.5e-25, 47.17% id in 212 aa, and to Ralstonia solanacearum respiratory nitrate reductase oxidoreductase NarJ or rsp0976 or rs02308 SWALL:Q8XR83 (EMBL:AL646082) (226 aa) fasta scores: E(): 2.2e-23, 41.7% id in 223 aa, and to Pseudomonas aeruginosa chaperone NarJ or pa3873 SWALL:O54045 (EMBL:Y15252) (246 aa) fasta scores: E(): 4.7e-23, 44.95% id in 218 aa; respiratory nitrate reductase subunit 1543201 narJ 3095404 narJ Burkholderia pseudomallei K96243 respiratory nitrate reductase subunit YP_111170.1 1542512 R 272560 CDS YP_111171.1 53722186 3097251 complement(1543198..1544727) 1 NC_006351.1 Similar to Paracoccus denitrificans nitrate reductase subunit NarH protein SWALL:Q56355 (EMBL:Z26255) (505 aa) fasta scores: E(): 8.3e-156, 73.82% id in 489 aa, and to Brucella melitensis nitrate reductase beta chain BmeII0951 SWALL:Q8YBE9 (EMBL:AE009728) (512 aa) fasta scores: E(): 1.6e-165, 76.11% id in 494 aa, and to Pseudomonas aeruginosa respiratory nitrate reductase beta subunit NarH or pa3874 SWALL:O54044 (EMBL:Y15252) (513 aa) fasta scores: E(): 3.3e-158, 75.54% id in 503 aa, and to Pseudomonas fluorescens respiratory nitrate reductase beta subunit NarH SWALL:Q9F0X6 (EMBL:AF197465) (512 aa) fasta scores: E(): 6.5e-157, 73.65% id in 501 aa; respiratory nitrate reductase subunit 1544727 narH 3097251 narH Burkholderia pseudomallei K96243 respiratory nitrate reductase subunit YP_111171.1 1543198 R 272560 CDS YP_111172.1 53722187 3097250 complement(1544724..1548527) 1 NC_006351.1 Similar to Escherichia coli respiratory nitrate reductase 2 alpha chain NarZ or b1468 SWALL:NARZ_ECOLI (SWALL:P19319) (1245 aa) fasta scores: E(): 0, 67.6% id in 1244 aa, and to Paracoccus halodenitrificans probable nitrate reductase alpha subunit NarG SWALL:Q8VUK0 (EMBL:AB076402) (1255 aa) fasta scores: E(): 0, 68.63% id in 1256 aa, and to Pseudomonas aeruginosa respiratory nitrate reductase alpha subunit NarG or pa3875 SWALL:O54043 (EMBL:Y15252) (1261 aa) fasta scores: E(): 0, 67.68% id in 1247 aa, and to Salmonella typhimurium nitrate reductase 2, alpha subunit NarZ or stm1577 SWALL:Q8ZPE1 (EMBL:AE008769) (1246 aa) fasta scores: E(): 0, 68.37% id in 1246 aa; respiratory nitrate reductase subunit 1548527 narG 3097250 narG Burkholderia pseudomallei K96243 respiratory nitrate reductase subunit YP_111172.1 1544724 R 272560 CDS YP_111173.1 53722188 3096102 1549297..1551264 1 NC_006351.1 Similar to Bacillus subtilis sensor protein DegS or SacU SWALL:DEGS_BACSU (SWALL:P13799) (385 aa) from codon 330 fasta scores: E(): 5.1e-18, 29.48% id in 329 aa, and to Ralstonia solanacearum probable transmembrane two component system sensor kinase transcription regulator protein rsc0191 or rs00623 from codon 202 SWALL:Q8Y2Z0 (EMBL:AL646057) (458 aa) fasta scores: E(): 4.3e-49, 49.12% id in 458 aa. No transmembrane regions are predicted.; sensor kinase 1551264 3096102 BPSS1160 Burkholderia pseudomallei K96243 sensor kinase YP_111173.1 1549297 D 272560 CDS YP_111174.1 53722189 3096103 1551261..1551908 1 NC_006351.1 Similar to Ralstonia solanacearum EPS/virulence gene regulator VsrD SWALL:Q45416 (EMBL:U18135) (210 aa) fasta scores: E(): 3.3e-31, 48.09% id in 210 aa, and to Ralstonia solanacearum probable response regulator transcription regulator protein rsc0192 or rs00624 SWALL:Q8Y2Y9 (EMBL:AL646057) (215 aa) fasta scores: E(): 2.2e-45, 59.07% id in 215 aa, and to Ralstonia solanacearum response regulator transcription regulator protein VsrD or rsc0292 or rs03259 SWALL:Q8Y2P3 (EMBL:AL646058) (210 aa) fasta scores: E(): 3.3e-31, 48.09% id in 210 aa; response regulator protein 1551908 3096103 BPSS1161 Burkholderia pseudomallei K96243 response regulator protein YP_111174.1 1551261 D 272560 CDS YP_111175.1 53722190 3095423 1552463..1552873 1 NC_006351.1 Similar to Ralstonia solanacearum (pseudomonas solanacearum) virulence regulator VsrD SWALL:Q45417 (EMBL:U18135) (146 aa) fasta scores: E(): 9.5e-07, 31.2% id in 125 aa, and to Ralstonia solanacearum transcription regulator protein rsc0291 or rs03258 SWALL:Q8Y2P4 (EMBL:AL646058) (146 aa) fasta scores: E(): 1.1e-06, 31.2% id in 125 aa, and to Rhodococcus sp. NO1-1 CprR SWALL:O85372 (EMBL:AF064700) (212 aa) fasta scores: E(): 2.2e-05, 35.87% id in 131 aa; response regulator receiver domain-containing protein 1552873 3095423 BPSS1162 Burkholderia pseudomallei K96243 response regulator receiver domain-containing protein YP_111175.1 1552463 D 272560 CDS YP_111176.1 53722191 3096763 1552886..1553665 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 fumarate and nitrate reduction regulatory protein FNR or NirR or b1334 or c1807 or z2433 or ecs1915 SWALL:FNR_ECOLI (SWALL:P03019) (250 aa) fasta scores: E(): 5.1e-36, 39.41% id in 241 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0190 or rs00622 SWALL:Q8Y2Z1 (EMBL:AL646057) (266 aa) fasta scores: E(): 3.6e-47, 48.65% id in 261 aa, and to Neisseria meningitidis anaerobic transcriptional regulatory protein nma2107 or nmb0380 SWALL:Q9JQQ8 (EMBL:AL162758) (244 aa) fasta scores: E(): 6.9e-43, 50.46% id in 216 aa; fumarate/nitrate reduction family regulatory protein 1553665 3096763 BPSS1163 Burkholderia pseudomallei K96243 fumarate/nitrate reduction family regulatory protein YP_111176.1 1552886 D 272560 CDS YP_111177.1 53722192 3096764 complement(1554050..1555702) 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein Xac0753 SWALL:AAM35642 (EMBL:AE011705) (526 aa) fasta scores: E(): 1e-41, 37.03% id in 513 aa, and to Xanthomonas campestris hypothetical protein Xcc0700 SWALL:AAM40016 (EMBL:AE012168) (525 aa) fasta scores: E(): 1.2e-41, 36.07% id in 510 aa; hypothetical protein 1555702 3096764 BPSS1164 Burkholderia pseudomallei K96243 hypothetical protein YP_111177.1 1554050 R 272560 CDS YP_111178.1 53722193 3097049 1556400..1557245 1 NC_006351.1 Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD or b0368 SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 1.4e-22, 30.1% id in 279 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2310 SWALL:Q9I1G5 (EMBL:AE004657) (295 aa) fasta scores: E(): 1.7e-31, 36.2% id in 279 aa, and to Ralstonia solanacearum alpha-ketoglutarate-dependent taurine dioxygenase oxidoreductase TauD or rsc0746 or rs05107 SWALL:Q8Y1E4 (EMBL:AL646060) (301 aa) fasta scores: E(): 4.8e-31, 39.43% id in 284 aa; alpha-ketoglutarate-dependent taurine dioxygenase 1557245 3097049 BPSS1165 Burkholderia pseudomallei K96243 alpha-ketoglutarate-dependent taurine dioxygenase YP_111178.1 1556400 D 272560 CDS YP_111179.1 53722194 3094979 complement(1557496..1558746) 1 NC_006351.1 Similar to Yersinia pestis multidrug resistance protein ypo2148 or y2173 SWALL:Q8ZEL6 (EMBL:AJ414151) (400 aa) fasta scores: E(): 4e-21, 26.34% id in 372 aa, and to Escherichia coli florfenicol exporter FloR SWALL:Q9F8W2 (EMBL:AF231986) (404 aa) fasta scores: E(): 1.4e-20, 27.82% id in 399 aa, and to Vibrio cholerae Florfenicol exporter FloR SWALL:Q8VVN0 (EMBL:AY034138) (404 aa) fasta scores: E(): 1.4e-20, 27.82% id in 399 aa, and to Bacillus subtilis bicyclomycin resistance protein YdgK SWALL:P96709 (EMBL:AB001488) (402 aa) fasta scores: E(): 1.6e-20, 23.69% id in 384 aa; transport/efflux protein 1558746 3094979 BPSS1166 Burkholderia pseudomallei K96243 transport/efflux protein YP_111179.1 1557496 R 272560 CDS YP_111180.1 53722195 3094980 complement(1558802..1559686) 1 NC_006351.1 C-terminal region is similar to Streptomyces avermitilis thioesterase PteH SWALL:Q93H75 (EMBL:AB070949) (255 aa) fasta scores: E(): 2.8e-23, 36.28% id in 226 aa, and Clostridium acetobutylicum thioesterase II of alpha/beta hydrolase superfamily cac1022 SWALL:Q97K97 (EMBL:AE007618) (253 aa) fasta scores: E(): 2.9e-24, 35.34% id in 215 aa. Possible alternative translational start site; thioesterase 1559686 3094980 BPSS1167 Burkholderia pseudomallei K96243 thioesterase YP_111180.1 1558802 R 272560 CDS YP_111181.1 53722196 3095975 complement(1559667..1560512) 1 NC_006351.1 Similar to Corynebacterium glutamicum hypothetical protein Cgl0569 SWALL:BAB97962 (EMBL:AP005275) (152 aa) fasta scores: E(): 4.7e-11, 34.69% id in 147 aa, and to Anabaena sp. hypothetical protein All0878 SWALL:Q8YYH2 (EMBL:AP003583) (272 aa) fasta scores: E(): 9e-11, 27.67% id in 271 aa, and to Streptomyces coelicolor acetyltransferase sco7150 or sc9a4.12C SWALL:Q9FBU1 (EMBL:AL939130) (278 aa) fasta scores: E(): 2.1e-07, 31.33% id in 233 aa; acetyltransferase 1560512 3095975 BPSS1168 Burkholderia pseudomallei K96243 acetyltransferase YP_111181.1 1559667 R 272560 CDS YP_111182.1 53722197 3095811 complement(1560517..1562109) 1 NC_006351.1 Similar to Anabaena sp. polyketide synthase all2641 SWALL:Q8YTS2 (EMBL:AP003590) (1019 aa) fasta scores: E(): 1.8e-80, 42.77% id in 533 aa, and to Ralstonia solanacearum hypothetical protein rsp0639 or rs03728 SWALL:Q8XS42 (EMBL:AL646079) (537 aa) fasta scores: E(): 9.7e-77, 41.23% id in 519 aa, and to Streptomyces verticillus hypothetical 59.7 kDa protein SWALL:Q9AG77 (EMBL:AF340166) (544 aa) fasta scores: E(): 9.4e-50, 42.08% id in 537 aa; hypothetical protein 1562109 3095811 BPSS1169 Burkholderia pseudomallei K96243 hypothetical protein YP_111182.1 1560517 R 272560 CDS YP_111183.1 53722198 3095812 complement(1562122..1564590) 1 NC_006351.1 Similar to Polyangium cellulosum polyketide synthase EpoB SWALL:Q9L8C8 (EMBL:AF210843) (1832 aa) fasta scores: E(): 2.2e-74, 42.47% id in 664 aa, and to Polyangium cellulosum EpoC SWALL:Q9KIZ8 (EMBL:AF217189) (1832 aa) fasta scores: E(): 9.3e-74, 42.16% id in 664 aa, and to Nostoc sp. GSV224 NosB SWALL:Q9RAH3 (EMBL:AF204805) (1244 aa) fasta scores: E(): 9.1e-73, 45.99% id in 524 aa; non-ribosomal peptide synthase/polyketide synthase 1564590 3095812 BPSS1170 Burkholderia pseudomallei K96243 non-ribosomal peptide synthase/polyketide synthase YP_111183.1 1562122 R 272560 CDS YP_111184.1 53722199 3097220 complement(1564571..1568047) 1 NC_006351.1 Similar to Anabaena sp. 90 peptide synthetase AdpA SWALL:Q9K5M2 (EMBL:AJ269505) (2258 aa) fasta scores: E(): 2.2e-72, 29.05% id in 1084 aa, and to Ralstonia solanacearum probable peptide synthetase rsp0642 or rs05859 SWALL:Q8XS39 (EMBL:AL646079) (5953 aa) fasta scores: E(): 1e-66, 33.39% id in 1069 aa, and to Myxococcus xanthus saframycin mx1 synthetase B SafB SWALL:Q50857 (EMBL:U24657) (1770 aa) fasta scores: E(): 4.3e-61, 39.62% id in 593 aa; non-ribosomal peptide synthase/polyketide synthase 1568047 3097220 BPSS1171 Burkholderia pseudomallei K96243 non-ribosomal peptide synthase/polyketide synthase YP_111184.1 1564571 R 272560 CDS YP_111185.1 53722200 3096448 complement(1568087..1572076) 1 NC_006351.1 Similar to Polyangium cellulosum polyketide synthase EpoC SWALL:Q9KIZ8 (EMBL:AF217189) (1832 aa) fasta scores: E(): 1.7e-90, 46.7% id in 576 aa, and to Polyangium cellulosum polyketide synthase EpoB SWALL:Q9L8C8 (EMBL:AF210843) (1832 aa) fasta scores: E(): 2.2e-90, 46.52% id in 576 aa, and to Stigmatella aurantiaca MtaD SWALL:Q9RFK8 (EMBL:AF188287) (3291 aa) fasta scores: E(): 2.5e-89, 48.97% id in 537 aa; non-ribosomal peptide synthase/polyketide synthase 1572076 3096448 BPSS1172 Burkholderia pseudomallei K96243 non-ribosomal peptide synthase/polyketide synthase YP_111185.1 1568087 R 272560 CDS YP_111186.1 53722201 3096449 complement(1572069..1576661) 1 NC_006351.1 Similar to Streptomyces verticillus polyketide synthase BlmVIII SWALL:Q9FB25 (EMBL:AF210249) (1841 aa) fasta scores: E(): 9.9e-99, 37.09% id in 1143 aa, and to Streptomyces natalensis PimS4 protein Pims4 SWALL:Q9EWA3 (EMBL:AJ278573) (2024 aa) fasta scores: E(): 1.1e-79, 29.41% id in 1785 aa, and to Streptomyces avermitilis modular polyketide synthase PteA5 SWALL:Q93H83 (EMBL:AB070949) (3352 aa) fasta scores: E(): 1.2e-78, 30.65% id in 1579 aa; non-ribosomal peptide/polyketide synthase 1576661 3096449 BPSS1173 Burkholderia pseudomallei K96243 non-ribosomal peptide/polyketide synthase YP_111186.1 1572069 R 272560 CDS YP_111187.1 53722202 3096286 complement(1576669..1581285) 1 NC_006351.1 Similar to Agrobacterium tumefaciens non-ribosomal peptide synthetase MtaD or atu3682 or agr_l_2311 SWALL:Q8U9P4 (EMBL:AE009297) (2399 aa) fasta scores: E(): 7.7e-68, 31.58% id in 1086 aa, and to Xanthomonas campestris ATP-dependent serine activating enzyme EntF or xcc3867 SWALL:AAM43098 (EMBL:AE012507) (1326 aa) fasta scores: E(): 5.3e-67, 31.43% id in 1056 aa, and to Xanthomonas axonopodis ATP-dependent serine activating enzyme EntF or xac3922 SWALL:AAM38759 (EMBL:AE012041) (1332 aa) fasta scores: E(): 4e-66, 29.34% id in 1261 aa; non-ribosomal peptide/polyketide synthase 1581285 3096286 BPSS1174 Burkholderia pseudomallei K96243 non-ribosomal peptide/polyketide synthase YP_111187.1 1576669 R 272560 CDS YP_111188.1 53722203 3096908 1581480..1583549 1 NC_006351.1 Similar to Salmonella typhimurium oligopeptidase A PrlC or OpdA or OptA or stm3594 SWALL:OPDA_SALTY (SWALL:P27237) (680 aa) fasta scores: E(): 8e-99, 39.85% id in 685 aa, and to Ralstonia solanacearum probable oligopeptidase A PrlC or rsc1595 or rs03957 SWALL:Q8XZ11 (EMBL:AL646065) (706 aa) fasta scores: E(): 4.5e-124, 47.51% id in 684 aa, and to Xanthomonas campestris oligopeptidase A PrlC or xcc0580 SWALL:AAM39896 (EMBL:AE012156) (674 aa) fasta scores: E(): 3.5e-109, 44.47% id in 688 aa; oligopeptidase A 1583549 3096908 BPSS1175 Burkholderia pseudomallei K96243 oligopeptidase A YP_111188.1 1581480 D 272560 CDS YP_111189.1 53722204 3096909 1584110..1584814 1 NC_006351.1 Similar to Ralstonia solanacearum transcriptional activator protein SolR SWALL:SLR2_RALSO (SWALL:O30919) (236 aa) fasta scores: E(): 5.1e-31, 41.02% id in 234 aa, and to Ralstonia solanacearum probable transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein rsp0778 or rs01929 SWALL:Q8XRQ3 (EMBL:AL646080) (248 aa) fasta scores: E(): 4e-32, 40.08% id in 237 aa, and to Ralstonia solanacearum transcriptional activator protein SolR or rsc3287 or rs02516 SWALL:SLR1_RALSO (SWALL:P58590) (236 aa) fasta scores: E(): 3.2e-31, 40.88% id in 225 aa; N-acyl-homoserine lactone dependent regulatory protein 1584814 3096909 BPSS1176 Burkholderia pseudomallei K96243 N-acyl-homoserine lactone dependent regulatory protein YP_111189.1 1584110 D 272560 CDS YP_111190.1 53722205 3095055 complement(1584931..1585788) 1 NC_006351.1 Weakly similar to an internal reion of Pseudomonas syringae thioesterase SyrC SWALL:Q52401 (EMBL:U25130) (433 aa) fasta scores: E(): 7.1e-07, 23.93% id in 259 aa; hypothetical protein 1585788 3095055 BPSS1177 Burkholderia pseudomallei K96243 hypothetical protein YP_111190.1 1584931 R 272560 CDS YP_111191.1 53722206 3095545 complement(1585839..1587188) 1 NC_006351.1 Similar to Bacillus cereus antiporter GerN SWALL:Q9KI10 (EMBL:AF246294) (387 aa) fasta scores: E(): 3.9e-12, 28.85% id in 402 aa, and to Streptomyces viridochromogenes transporter AviJ SWALL:Q93KW8 (EMBL:AF333038) (476 aa) fasta scores: E(): 2.5e-38, 33.4% id in 452 aa, and to Nocardia aerocolonigenes membrane transporter protein rebG SWALL:CAC93721 (EMBL:AB090952) (426 aa) fasta scores: E(): 8.8e-36, 35.89% id in 404 aa; transmembrane antiporter Na+ or K+/H+ exchanger 1587188 3095545 BPSS1178 Burkholderia pseudomallei K96243 transmembrane antiporter Na+ or K+/H+ exchanger YP_111191.1 1585839 R 272560 CDS YP_111192.1 53722207 3095546 1587668..1588111 1 NC_006351.1 hypothetical protein 1588111 3095546 BPSS1179 Burkholderia pseudomallei K96243 hypothetical protein YP_111192.1 1587668 D 272560 CDS YP_111193.1 53722208 3095128 1588194..1588814 1 NC_006351.1 Similar to Burkholderia pseudomallei acyl homoserine lactone synthase BpsI SWALL:AAM21707 (EMBL:AF501236) (203 aa) fasta scores: E(): 1.4e-32, 48.7% id in 193 aa, and to Burkholderia cepacia AHL synthase CepI SWALL:Q9AM55 (EMBL:AF330014) (202 aa) fasta scores: E(): 8.6e-35, 47.8% id in 205 aa; N-acylhomoserine lactone synthase 1588814 3095128 BPSS1180 Burkholderia pseudomallei K96243 N-acylhomoserine lactone synthase YP_111193.1 1588194 D 272560 CDS YP_111194.1 53722209 3094918 1588883..1590400 1 NC_006351.1 Similar to Streptomyces pristinaespiralis pristinamycin I synthase I SnbC SWALL:Q54959 (EMBL:X98690) (2591 aa) fasta scores: E(): 6.9e-60, 41.81% id in 507 aa, and to Anabaena sp. hypothetical protein All1695 SWALL:Q8YWC0 (EMBL:AP003586) (1449 aa) fasta scores: E(): 4.5e-62, 41.42% id in 507 aa; surfactin/non-ribosomally encoded peptide/polyketide synthase 1590400 3094918 BPSS1181 Burkholderia pseudomallei K96243 surfactin/non-ribosomally encoded peptide/polyketide synthase YP_111194.1 1588883 D 272560 CDS YP_111195.1 53722210 3094919 1590397..1590636 1 NC_006351.1 Similar to the region of Escherichia coli enterobactin synthetase component F EntF or b0586 in which the acyl carrier protein (ACP) is encoded SWALL:ENTF_ECOLI (SWALL:P11454) (1293 aa) fasta scores: E(): 5.7, 40% id in 50 aa, and to Bacillus subtilis peptide synthetase 1 PpsA or Pps1 SWALL:PPS1_BACSU (SWALL:P39845) (2561 aa) fasta scores: E(): 5.4, 38.46% id in 52 aa, and to; acyl carrier protein 1590636 3094919 BPSS1182 Burkholderia pseudomallei K96243 acyl carrier protein YP_111195.1 1590397 D 272560 CDS YP_111196.1 53722211 3094908 1590782..1591705 1 NC_006351.1 Similar to Pseudomonas syringae syringomycin biosynthesis enzyme 2 Syrb2 SWALL:Q9RBY6 (EMBL:U25130) (310 aa) fasta scores: E(): 4.5e-72, 53.61% id in 304 aa, and to Pseudomonas syringae CmaB SWALL:O50472 (EMBL:U14657) (262 aa) fasta scores: E(): 1.9e-55, 53.93% id in 267 aa; non-ribosomally encoded peptide/polyketide synthase 1591705 3094908 BPSS1183 Burkholderia pseudomallei K96243 non-ribosomally encoded peptide/polyketide synthase YP_111196.1 1590782 D 272560 CDS YP_111197.1 53722212 3096269 1591796..1592092 1 NC_006351.1 Poor database matches. Similar to an internal region of Streptomyces sp. MA6548 FK506 peptide synthetase fkbP SWALL:Q9ZGA6 (EMBL:AF082100) (1504 aa) fasta scores: E(): 0.59, 31.18% id in 93 aa. Possible gene remnant; hypothetical protein 1592092 3096269 BPSS1184 Burkholderia pseudomallei K96243 hypothetical protein YP_111197.1 1591796 D 272560 CDS YP_111198.1 53722213 3096470 1592930..1593055 1 NC_006351.1 Poor database matches. Weakly similar to Acinetobacter calcoaceticus p-hydroxybenzoate hydroxylase transcriptional activator pobR SWALL:POBR_ACICA (SWALL:Q43992) (271 aa) fasta scores: E(): 1.1, 40% id in 40 aa; hypothetical protein 1593055 3096470 BPSS1185a Burkholderia pseudomallei K96243 hypothetical protein YP_111198.1 1592930 D 272560 CDS YP_111199.1 53722214 3095129 1593544..1594350 1 NC_006351.1 hypothetical protein 1594350 3095129 BPSS1187 Burkholderia pseudomallei K96243 hypothetical protein YP_111199.1 1593544 D 272560 CDS YP_111200.1 53722215 3097212 complement(1597242..1598189) 1 NC_006351.1 Similar to Bacillus halodurans hypothetical protein Bh0875 SWALL:Q9KEH7 (EMBL:AP001510) (335 aa) fasta scores: E(): 3.3e-20, 32.01% id in 328 aa, and to Bacillus subtilis hypothetical protein YwcH or ipa-44D SWALL:YWCH_BACSU (SWALL:P39606) (333 aa) fasta scores: E(): 7.4e-18, 36.17% id in 235 aa, and to Brucella melitensis alkanal monooxygenase alpha chain Bmei0894 SWALL:Q8YHA8 (EMBL:AE009530) (327 aa) fasta scores: E(): 2.2e-17, 32.42% id in 330 aa; monooxygenase 1598189 3097212 BPSS1190 Burkholderia pseudomallei K96243 monooxygenase YP_111200.1 1597242 R 272560 CDS YP_111201.1 53722216 3096629 complement(1598201..1599265) 1 NC_006351.1 Similar to Rhizobium leguminosarum 1-aminocyclopropane-1-carboxylate deaminase AcdS SWALL:Q93AG0 (EMBL:AF421376) (339 aa) fasta scores: E(): 2.4e-07, 25.77% id in 291 aa, and to Escherichia coli 1-aminocyclopropane-1-carboxylate deaminase YedO or b1919 SWALL:1A1D_ECOLI (SWALL:P76316) (328 aa) fasta scores: E(): 4.5e-15, 29.58% id in 311 aa, and to Salmonella typhimurium 1-cyclopropane-carboxylate deaminase YedO or stm1953 SWALL:Q8ZNT7 (EMBL:AE008786) (328 aa) fasta scores: E(): 4.5e-15, 29.8% id in 302 aa; 1-aminocyclopropane-1-carboxylate deaminase 1599265 3096629 BPSS1191 Burkholderia pseudomallei K96243 1-aminocyclopropane-1-carboxylate deaminase YP_111201.1 1598201 R 272560 CDS YP_111202.1 53722217 3097230 complement(1599262..1600587) 1 NC_006351.1 hypothetical protein 1600587 3097230 BPSS1192 Burkholderia pseudomallei K96243 hypothetical protein YP_111202.1 1599262 R 272560 CDS YP_111203.1 53722218 3097231 complement(1600584..1605287) 1 NC_006351.1 N-terminus similar to Anabaena sp. 90 peptide synthetase AdpB SWALL:Q9K5M1 (EMBL:AJ269505) (5060 aa) fasta scores: E(): 1e-130, 33.65% id in 1539 aa, and N-terminus similar to Nostoc sp. GSV224 NosD SWALL:Q9RAH1 (EMBL:AF204805) (2450 aa) fasta scores: E(): 3.7e-117, 32.26% id in 1559 aa, and N-terminus similar to Bradyrhizobium japonicum Id930 SWALL:Q9AMR5 (EMBL:AF322013) (3310 aa) fasta scores: E(): 1.4e-110, 36.09% id in 1305 aa; non-ribosomal peptide/polyketide synthase 1605287 3097231 BPSS1193 Burkholderia pseudomallei K96243 non-ribosomal peptide/polyketide synthase YP_111203.1 1600584 R 272560 CDS YP_111204.1 53722219 3096934 complement(1605305..1607986) 1 NC_006351.1 C-terminus is similar to Stigmatella aurantiaca peptide synthase/polyketide synthase MtaG SWALL:Q9RFK5 (EMBL:AF188287) (1750 aa) fasta scores: E(): 5.9e-68, 39.81% id in 648 aa, and to Mycobacterium smegmatis peptide synthase/polyketide synthas FxbC SWALL:O87314 (EMBL:AF027770) (4976 aa) fasta scores: E(): 1e-67, 42.6% id in 629 aa; peptide synthase/polyketide synthase 1607986 3096934 BPSS1194 Burkholderia pseudomallei K96243 peptide synthase/polyketide synthase YP_111204.1 1605305 R 272560 CDS YP_111205.1 53722220 3096154 complement(1608005..1609315) 1 NC_006351.1 Similar to the N-terminus of Streptomyces verticillus peptide synthetase NRPS9-8 BlmX SWALL:Q9FB27 (EMBL:AF210249) (2162 aa) fasta scores: E(): 2.5e-11, 29.57% id in 470 aa, and to the N-terminus of Pseudomonas aeruginosa probable non-ribosomal peptide synthetase pa2302 SWALL:Q9I1H3 (EMBL:AE004656) (2124 aa) fasta scores: E(): 6.1e-10, 30.9% id in 466 aa; non-ribosomal peptide synthase 1609315 3096154 BPSS1195 Burkholderia pseudomallei K96243 non-ribosomal peptide synthase YP_111205.1 1608005 R 272560 CDS YP_111206.1 53722221 3096155 complement(1609312..1610373) 1 NC_006351.1 Similar to Pseudomonas syringae syringomycin biosynthesis enzyme SyrP SWALL:P97053 (EMBL:U88574) (353 aa) fasta scores: E(): 9.3e-40, 36.39% id in 349 aa; SyrP-like protein 1610373 3096155 BPSS1196 Burkholderia pseudomallei K96243 SyrP-like protein YP_111206.1 1609312 R 272560 CDS YP_111207.1 53722222 3096534 complement(1610399..1619863) 1 NC_006351.1 Similar to central portion of Ralstonia solanacearum probable peptide synthetase rsp0641 or rs05860 SWALL:Q8XS40 (EMBL:AL646079) (6889 aa) fasta scores: E(): 1.4e-124, 33.62% id in 3396 aa, and to N-terminus of Stigmatella aurantiaca StiC protein SWALL:Q8RJY4 (EMBL:AJ421825) (1885 aa) fasta scores: E(): 3.5e-95, 41.69% id in 933 aa, and to N-terminus of Stigmatella aurantiaca StiB protein SWALL:Q8RJY5 (EMBL:AJ421825) (1585 aa) fasta scores: E(): 1.3e-91, 36.35% id in 1268 aa; non-ribosomal peptide synthase 1619863 3096534 BPSS1197 Burkholderia pseudomallei K96243 non-ribosomal peptide synthase YP_111207.1 1610399 R 272560 CDS YP_111208.1 53722223 3096535 complement(1619864..1620622) 1 NC_006351.1 hypothetical protein 1620622 3096535 BPSS1198 Burkholderia pseudomallei K96243 hypothetical protein YP_111208.1 1619864 R 272560 CDS YP_111209.1 53722224 3095762 complement(1620659..1620922) 1 NC_006351.1 hypothetical protein 1620922 3095762 BPSS1199 Burkholderia pseudomallei K96243 hypothetical protein YP_111209.1 1620659 R 272560 CDS YP_111210.1 53722225 3094921 1621547..1623028 1 NC_006351.1 Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 1.6e-40, 37.79% id in 471 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0268 SWALL:Q9I6M2 (EMBL:AE004465) (473 aa) fasta scores: E(): 6.5e-75, 54.37% id in 491 aa, and to Anabaena sp. transcriptional regulator alr4738 SWALL:Q8YN32 (EMBL:AP003597) (490 aa) fasta scores: E(): 4e-53, 39.17% id in 485 aa; GntR family transcriptional regulator 1623028 3094921 BPSS1200 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_111210.1 1621547 D 272560 CDS YP_111211.1 53722226 3094922 1623260..1623709 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0269 SWALL:Q9I6M1 (EMBL:AE004465) (145 aa) fasta scores: E(): 6.7e-31, 54.86% id in 144 aa, and to Rhizobium meliloti hypothetical protein r00543 or smc02239 SWALL:Q92S80 (EMBL:AL591784) (153 aa) fasta scores: E(): 7e-31, 52.77% id in 144 aa, and to Agrobacterium tumefaciens hypothetical protein atu0492 or agr_c_871 SWALL:Q8UI08 (EMBL:AE009018) (167 aa) fasta scores: E(): 6.3e-29, 50.35% id in 141 aa; hypothetical protein 1623709 3094922 BPSS1201 Burkholderia pseudomallei K96243 hypothetical protein YP_111211.1 1623260 D 272560 CDS YP_111212.1 53722227 3095144 1623706..1624161 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0270 pa0270 SWALL:Q9I6M0 (EMBL:AE004465) (135 aa) fasta scores: E(): 1.4e-11, 39.55% id in 134 aa, and to Rhizobium meliloti hypothetical exported protein smb20700 rb1407 or smb20700 SWALL:Q92TT8 (EMBL:AL603647) (137 aa) fasta scores: E(): 5.4e-11, 41.22% id in 131 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 1624161 3095144 BPSS1202 Burkholderia pseudomallei K96243 hypothetical protein YP_111212.1 1623706 D 272560 CDS YP_111213.1 53722228 3095952 1624695..1625990 1 NC_006351.1 catalyzes the conversion of carbamoyl phosphate and aspartate to form N-carbamoyl aspartate; aspartate carbamoyltransferase 1625990 pyrB 3095952 pyrB Burkholderia pseudomallei K96243 aspartate carbamoyltransferase YP_111213.1 1624695 D 272560 CDS YP_111214.1 53722229 3095648 1626389..1628635 1 NC_006351.1 Similar to Pseudomonas aeruginosa hydroxamate-type ferrisiderophore receptor PiuA or Fiu or pa4514 SWALL:O68590 (EMBL:AF051690) (753 aa) fasta scores: E(): 1.1e-134, 49.12% id in 741 aa, and to Escherichia coli O157:H7 outer membrane receptor for iron transport z1026 or ecs0883 SWALL:Q8X7W7 (EMBL:AE005261) (760 aa) fasta scores: E(): 7.3e-73, 36.9% id in 775 aa, and to Escherichia coli probable tonB-dependent receptor YbiL precursor or b0805 SWALL:YBIL_ECOLI (SWALL:P75780) (760 aa) fasta scores: E(): 7.3e-73, 36.77% id in 775 aa; iron transport receptor protein 1628635 3095648 BPSS1204 Burkholderia pseudomallei K96243 iron transport receptor protein YP_111214.1 1626389 D 272560 CDS YP_111215.1 53722230 3095649 1628637..1629383 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa4516 pa4516 SWALL:Q9HVQ6 (EMBL:AE004865) (271 aa) fasta scores: E(): 2.8e-35, 47.59% id in 229 aa, and to Xanthomonas axonopodis hypothetical protein Xac2943 xac2943 SWALL:AAM37788 (EMBL:AE011936) (252 aa) fasta scores: E(): 5.1e-32, 45.25% id in 232 aa, and to Xanthomonas campestris hypothetical protein Xcc2774 xcc2774 SWALL:AAM42046 (EMBL:AE012390) (252 aa) fasta scores: E(): 7.3e-31, 42.92% id in 226 aa; hypothetical protein 1629383 3095649 BPSS1205 Burkholderia pseudomallei K96243 hypothetical protein YP_111215.1 1628637 D 272560 CDS YP_111216.1 53722231 3097227 1629380..1630063 1 NC_006351.1 Similar to Pseudomonas aeruginosa iron-uptake factor PiuC SWALL:O68589 (EMBL:AF051690) (226 aa) fasta scores: E(): 1.8e-52, 58.4% id in 226 aa, and to Xanthomonas campestris hypothetical protein Xcc2773SWALL:AAM42045 (EMBL:AE012390) (228 aa) fasta scores: E(): 2.9e-54, 61.13% id in 229 aa, and to Bordetella bronchiseptica hypothetical 25.1 kDa protein SWALL:Q9S3N8 (EMBL:AJ132742) (226 aa) fasta scores: E(): 9.9e-54, 60.17% id in 226 aa; hydroxylase 1630063 3097227 BPSS1206 Burkholderia pseudomallei K96243 hydroxylase YP_111216.1 1629380 D 272560 CDS YP_111217.1 53722232 3097244 complement(1631212..1631577) 1 NC_006351.1 Similar to Escherichia coli transposase InsN for insertion sequence element Is911A InsN1 or b0255 SWALL:INN1_ECOLI (SWALL:P75679) (134 aa) fasta scores: E(): 0.45, 29.78% id in 94 aa, and to Bradyrhizobium japonicum Id47 id47 SWALL:Q9ANP5 (EMBL:AF322012) (119 aa) fasta scores: E(): 4.8e-23, 72.81% id in 103 aa, and to Bradyrhizobium japonicum Id62 SWALL:Q9ANN6 (EMBL:AF322012) (119 aa) fasta scores: E(): 2.5e-22, 71.84% id in 103 aa; transposase 1631577 3097244 BPSS1209 Burkholderia pseudomallei K96243 transposase YP_111217.1 1631212 R 272560 CDS YP_111218.1 53722233 3097242 complement(1631760..1632023) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc3217 or rs02434 SWALL:Q8XUH1 (EMBL:AL646074) (90 aa) fasta scores: E(): 1.1e-19, 60.71% id in 84 aa, and to Ralstonia solanacearum hypothetical protein rsc0961 or rs06040 SWALL:Q8Y0T2 (EMBL:AL646061) (88 aa) fasta scores: E(): 3.2e-15, 53.01% id in 83 aa, and to Ralstonia solanacearum hypothetical protein rsp0515 or rs00394 SWALL:Q8XSG1 (EMBL:AL646079) (88 aa) fasta scores: E(): 7e-15, 52.94% id in 85 aa; hypothetical protein 1632023 3097242 BPSS1210 Burkholderia pseudomallei K96243 hypothetical protein YP_111218.1 1631760 R 272560 CDS YP_111219.1 53722234 3097243 complement(1632033..1633571) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0259 SWALL:Q9I6N0 (EMBL:AE004464) (480 aa) fasta scores: E(): 4.5e-15, 28.39% id in 472 aa; hypothetical protein 1633571 3097243 BPSS1211 Burkholderia pseudomallei K96243 hypothetical protein YP_111219.1 1632033 R 272560 CDS YP_111220.1 53722235 3095625 complement(1633710..1635902) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0260 SWALL:Q9I6M9 (EMBL:AE004464) (716 aa) fasta scores: E(): 1.7e-24, 31.97% id in 763 aa; hypothetical protein 1635902 3095625 BPSS1212 Burkholderia pseudomallei K96243 hypothetical protein YP_111220.1 1633710 R 272560 CDS YP_111221.1 53722236 3097259 complement(1635964..1638741) 1 NC_006351.1 Similar to Ralstonia solanacearum VGR-related protein rsc3222 or rs02439 SWALL:Q8XUG6 (EMBL:AL646074) (547 aa) fasta scores: E(): 7.4e-54, 45.28% id in 382 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0262 SWALL:Q9I6M7 (EMBL:AE004464) (1019 aa) fasta scores: E(): 4.1e-43, 31.13% id in 893 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1511 SWALL:Q9I3K1 (EMBL:AE004579) (842 aa) fasta scores: E(): 7.3e-39, 30.09% id in 864 aa; hypothetical protein 1638741 3097259 BPSS1213 Burkholderia pseudomallei K96243 hypothetical protein YP_111221.1 1635964 R 272560 CDS YP_111222.1 53722237 3097260 1640244..1640939 1 NC_006351.1 transcriptional regulator 1640939 3097260 BPSS1214 Burkholderia pseudomallei K96243 transcriptional regulator YP_111222.1 1640244 D 272560 CDS YP_111223.1 53722238 3096117 1640912..1642192 1 NC_006351.1 Similar to Klebsiella pneumoniae citrate-proton symporter CitH or Cit SWALL:CIT1_KLEPN (SWALL:P16482) (444 aa) fasta scores: E(): 2.2e-19, 25.71% id in 420 aa, and to Rickettsia conorii proline/betaine transporter Prop7 or rc1368 SWALL:Q92FV9 (EMBL:AE008682) (424 aa) fasta scores: E(): 1.1e-27, 26.19% id in 420 aa, and to Rickettsia prowazekii proline/betaine transporter rp881 SWALL:Q9ZC87 (EMBL:AJ235273) (423 aa) fasta scores: E(): 1.2e-27, 26.52% id in 411 aa; sugar transporter 1642192 3096117 BPSS1215 Burkholderia pseudomallei K96243 sugar transporter YP_111223.1 1640912 D 272560 CDS YP_111224.1 53722239 3097261 1642227..1642826 1 NC_006351.1 Similar to Bacillus subtilis thiamine-phosphate pyrophosphorylase ThiE or ThiC or Ipa-26D SWALL:THIE_BACSU (SWALL:P39594) (222 aa) fasta scores: E(): 8.4e-11, 27.32% id in 172 aa, and to Ralstonia solanacearum thiamine-phosphate pyrophosphorylase ThiE2 or rsp0984 or rs02315 SWALL:Q8XR75 (EMBL:AL646082) (198 aa) fasta scores: E(): 6.5e-31, 43.68% id in 190 aa, and to Xanthomonas axonopodis dGTP-pyrophosphohydrolase xac0789 SWALL:AAM35677 (EMBL:AE011709) (315 aa) fasta scores: E(): 1.3e-25, 43.78% id in 185 aa; thiamine-phosphate pyrophosphorylase 1642826 3097261 BPSS1216 Burkholderia pseudomallei K96243 thiamine-phosphate pyrophosphorylase YP_111224.1 1642227 D 272560 CDS YP_111225.1 53722240 3097262 1644100..1644699 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp0327 or rs05439 SWALL:Q8XSZ0 (EMBL:AL646078) (199 aa) fasta scores: E(): 2.3e-33, 60.41% id in 192 aa, and to Caulobacter crescentus hypothetical protein Cc0019 SWALL:Q9AC47 (EMBL:AE005676) (210 aa) fasta scores: E(): 3.4e-14, 43.78% id in 201 aa, and to Rhizobium loti hypothetical protein Mlr0093 SWALL:Q98NL1 (EMBL:AP002994) (536 aa) fasta scores: E(): 3.5e-09, 36.84% id in 190 aa; hypothetical protein 1644699 3097262 BPSS1217 Burkholderia pseudomallei K96243 hypothetical protein YP_111225.1 1644100 D 272560 CDS YP_111226.1 53722241 3097185 1645592..1647145 1 NC_006351.1 C-terminus similar to Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or Chem or stm1919 SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 1.9e-53, 56.88% id in 327 aa, and entire protein similar to Ralstonia solanacearum methyl-accepting chemotaxis transducer transmembrane protein rsp1099 or rs02605 SWALL:Q8XQW9 (EMBL:AL646082) (513 aa) fasta scores: E(): 3.3e-87, 52.62% id in 515 aa, and entire protein similar to Ralstonia solanacearum probable methyl-accepting chemotaxis transducer transmembrane protein rsc1155 or rs04596 SWALL:Q8Y089 (EMBL:AL646063) (629 aa) fasta scores: E(): 9.5e-83, 50.87% id in 515 aa; methyl-accepting chemotaxis protein 1647145 3097185 BPSS1218 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_111226.1 1645592 D 272560 CDS YP_111227.1 53722242 3097077 1647742..1649526 1 NC_006351.1 Similar to Neisseria meningitidis penicillin-binding protein 2 PenA or nma2072 or nmb0413 SWALL:PBP2_NEIMA (SWALL:P11882) (581 aa) fasta scores: E(): 1.2e-81, 44.13% id in 580 aa, and to Ralstonia solanacearum probable penicillin-binding 3 precursor Pbp-3 transmembrane protein ftsi or rsc2850 or rs00255 SWALL:Q8XVI1 (EMBL:AL646072) (595 aa) fasta scores: E(): 1.9e-107, 51.9% id in 578 aa, and to Neisseria meningitidis penicillin-binding protein 2 PenA SWALL:Q51098 (EMBL:X59630) (582 aa) fasta scores: E(): 7.3e-82, 44.63% id in 578 aa; penicillin-binding protein 1649526 3097077 BPSS1219 Burkholderia pseudomallei K96243 penicillin-binding protein YP_111227.1 1647742 D 272560 CDS YP_111228.1 53722243 3095667 1649914..1650915 1 NC_006351.1 Similar to Escherichia coli L-arabinose-binding periplasmic protein precursor AraF or b1901 SWALL:ARAF_ECOLI (SWALL:P02924) (329 aa) fasta scores: E(): 2.9e-51, 46.08% id in 319 aa, and to Ralstonia solanacearum probable L-arabinose-binding periplasmic AraF or rsc2758 or rs00096 SWALL:Q8XVS1 (EMBL:AL646071) (331 aa) fasta scores: E(): 7.5e-77, 64.46% id in 318 aa, and to Rhizobium meliloti ABC transporter periplasmic sugar-binding protein rb0490 or smb20508 SWALL:Q92W55 (EMBL:AL603643) (327 aa) fasta scores: E(): 1.7e-66, 55.55% id in 324 aa; L-arabinose-binding periplasmic protein precursor 1650915 araF 3095667 araF Burkholderia pseudomallei K96243 L-arabinose-binding periplasmic protein precursor YP_111228.1 1649914 D 272560 CDS YP_111229.1 53722244 3097078 1650974..1651747 1 NC_006351.1 Similar to Escherichia coli oxidoreductase UcpA or b2426 SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) fasta scores: E(): 9.6e-19, 35.03% id in 254 aa, and to Agrobacterium tumefaciens short-chain dehydrogenase atu2597 or agr_c_4705 SWALL:Q8UCA1 (EMBL:AE009206) (261 aa) fasta scores: E(): 7.8e-32, 46.03% id in 252 aa, and to Rhizobium meliloti oxidoreductase, Sdr superfamily protein rb0825 or smb21159 SWALL:Q92V84 (EMBL:AL603645) (258 aa) fasta scores: E(): 2.7e-29, 43.47% id in 253 aa; short chain dehydrogenase 1651747 3097078 BPSS1221 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_111229.1 1650974 D 272560 CDS YP_111230.1 53722245 3097201 complement(1651782..1653533) 1 NC_006351.1 Similar to Yersinia enterocolitica efflux pump/antiporter RosB SWALL:Q56876 (EMBL:U46859) (563 aa) fasta scores: E(): 5.1e-42, 46.44% id in 562 aa, and to Rhizobium meliloti transport protein ra0872 or sma1600 SWALL:Q92YK4 (EMBL:AE007274) (584 aa) fasta scores: E(): 1.1e-95, 51.13% id in 573 aa, and to Brucella melitensis potassium/proton antiporter rosb bmei0679 SWALL:Q8YHW7 (EMBL:AE009509) (619 aa) fasta scores: E(): 1.1e-94, 50.52% id in 576 aa; efflux pump/antiporter 1653533 3097201 BPSS1222 Burkholderia pseudomallei K96243 efflux pump/antiporter YP_111230.1 1651782 R 272560 CDS YP_111231.1 53722246 3095929 1654763..1655665 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa3325 SWALL:Q9HYS0 (EMBL:AE004754) (295 aa) fasta scores: E(): 2.8e-58, 49.14% id in 291 aa, and to Streptomyces coelicolor hypothetical protein sco2221 or sc10b7.16 SWALL:Q9KZ16 (EMBL:AL939111) (296 aa) fasta scores: E(): 6.4e-46, 46.66% id in 285 aa, and to Mycobacterium tuberculosis hypothetical protein rv2777c or mt2847 or mtv002.42C SWALL:O33319 (EMBL:AL008967) (393 aa) fasta scores: E(): 1.1e-41, 39.22% id in 283 aa; hypothetical protein 1655665 3095929 BPSS1223 Burkholderia pseudomallei K96243 hypothetical protein YP_111231.1 1654763 D 272560 CDS YP_111232.1 53722247 3095930 1655766..1657739 1 NC_006351.1 Similar to Synechocystis sp. hypothetical protein Sll0173 SWALL:Q55557 (EMBL:D63999) (352 aa) fasta scores: E(): 2.4e-16, 31.06% id in 264 aa, and to Streptomyces coelicolor hydrolase sco4449 or scd6.27C SWALL:Q9KZX7 (EMBL:AL939120) (299 aa) fasta scores: E(): 3.8e-05, 26.2% id in 290 aa, and to Ralstonia solanacearum hydrolase transmembrane protein rsp0135 or rs02985 SWALL:Q8XTH5 (EMBL:AL646076) (349 aa) fasta scores: E(): 7.7e-05, 32.16% id in 286 aa; hypothetical protein 1657739 3095930 BPSS1224 Burkholderia pseudomallei K96243 hypothetical protein YP_111232.1 1655766 D 272560 CDS YP_111233.1 53722248 3095988 1657753..1658109 1 NC_006351.1 hypothetical protein 1658109 3095988 BPSS1225 Burkholderia pseudomallei K96243 hypothetical protein YP_111233.1 1657753 D 272560 CDS YP_111234.1 53722249 3097014 1658338..1658616 1 NC_006351.1 hypothetical protein 1658616 3097014 BPSS1226 Burkholderia pseudomallei K96243 hypothetical protein YP_111234.1 1658338 D 272560 CDS YP_111235.1 53722250 3097015 complement(1658768..1659241) 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein sco7282 or sc5h1.10C SWALL:Q9X7R8 (EMBL:AL939131) (160 aa) fasta scores: E(): 4.2e-28, 50.31% id in 159 aa, and to Bradyrhizobium japonicum Blr2409 protein SWALL:BAC47674 (EMBL:AP005943) (162 aa) fasta scores: E(): 7e-25, 42.4% id in 158 aa, and to Rhizobium loti hypothetical protein Mll5357 SWALL:Q98C01 (EMBL:AP003006) (156 aa) fasta scores: E(): 3.2e-24, 44.23% id in 156 aa; hypothetical protein 1659241 3097015 BPSS1227 Burkholderia pseudomallei K96243 hypothetical protein YP_111235.1 1658768 R 272560 CDS YP_111236.1 53722251 3096660 complement(1659397..1660419) 1 NC_006351.1 Similar to Pseudomonas fluorescens CmaX SWALL:Q9S4T9 (EMBL:AF115334) (331 aa) fasta scores: E(): 3.2e-19, 28.32% id in 293 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1873 SWALL:Q9I2M4 (EMBL:AE004613) (340 aa) fasta scores: E(): 2.9e-77, 62.91% id in 329 aa, and to Pseudomonas aeruginosa cytoplasmic membrane-associated protein CmaX or pa1773 SWALL:Q9ZIH2 (EMBL:AF027290) (332 aa) fasta scores: E(): 1.1e-22, 28.48% id in 337 aa; cation transporter 1660419 3096660 BPSS1228 Burkholderia pseudomallei K96243 cation transporter YP_111236.1 1659397 R 272560 CDS YP_111237.1 53722252 3096395 1660932..1661714 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 aga operon transcriptional repressor AgaR or b3131 or c3886 or z4483 or ecs4009 SWALL:AGAR_ECOLI (SWALL:P42902) (269 aa) fasta scores: E(): 1.1e-14, 28.62% id in 248 aa, and to Rhizobium loti transcriptional regulator mlr6641 SWALL:Q988Q4 (EMBL:AP003009) (238 aa) fasta scores: E(): 3.5e-46, 61.68% id in 214 aa, and to Rhizobium meliloti transcription regulator protein r03273 or smc03890 SWALL:Q92L17 (EMBL:AL591793) (260 aa) fasta scores: E(): 1.4e-31, 42.97% id in 249 aa; transcriptional regulator 1661714 3096395 BPSS1229 Burkholderia pseudomallei K96243 transcriptional regulator YP_111237.1 1660932 D 272560 CDS YP_111238.1 53722253 3096396 1661727..1662884 1 NC_006351.1 Similar to Yersinia pestis membrane protein ypo1221 or y2967 SWALL:Q8ZGR2 (EMBL:AJ414147) (384 aa) fasta scores: E(): 1.7e-54, 46.32% id in 367 aa, and to Rhizobium meliloti transport protein r03272 or smc03889 SWALL:Q92L18 (EMBL:AL591793) (379 aa) fasta scores: E(): 3.4e-36, 36.43% id in 365 aa, and to Agrobacterium tumefaciens MFS permease atu2724 or agr_c_4938 SWALL:Q8UBX5 (EMBL:AE009218) (398 aa) fasta scores: E(): 1.3e-34, 32.33% id in 368 aa; transport protein 1662884 3096396 BPSS1230 Burkholderia pseudomallei K96243 transport protein YP_111238.1 1661727 D 272560 CDS YP_111239.1 53722254 3095100 complement(1663300..1663770) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein Ypo4064 ypo4064 SWALL:Q8Z9X3 (EMBL:AJ414160) (150 aa) fasta scores: E(): 5.2e-26, 51.02% id in 147 aa; hypothetical protein 1663770 3095100 BPSS1231 Burkholderia pseudomallei K96243 hypothetical protein YP_111239.1 1663300 R 272560 CDS YP_111240.1 53722255 3096060 1664562..1665842 1 NC_006351.1 Similar to Rhodobacter sphaeroides periplasmic sorbitol-binding protein smoE SWALL:O30831 (EMBL:AF018073) (436 aa) fasta scores: E(): 2.4e-22, 28.47% id in 432 aa, and to the C-terminus of Yersinia pestis hypothetical protein similar to af039956_5 sinorhizobium fredii ypo1893 or y2417 SWALL:Q9ZC22 (EMBL:AL031866) (422 aa) fasta scores: E(): 6.2e-37, 33.87% id in 434 aa, and to Rhizobium meliloti probable sorbitol-binding periplasmic protein smoE or r02445 or smc01496 SWALL:Q92N02 (EMBL:AL591790) (436 aa) fasta scores: E(): 2e-23, 29.13% id in 429 aa; transporter periplasmic binding protein 1665842 3096060 BPSS1232 Burkholderia pseudomallei K96243 transporter periplasmic binding protein YP_111240.1 1664562 D 272560 CDS YP_111241.1 53722256 3096061 1666029..1666907 1 NC_006351.1 Similar to Streptococcus pneumoniae binding protein dependent ORF-3 SWALL:Q54725 (EMBL:U43526) (294 aa) fasta scores: E(): 4.9e-26, 31.93% id in 285 aa, and to Rhizobium loti sugar ABC transporter permease mlr4912 SWALL:Q98D12 (EMBL:AP003005) (290 aa) fasta scores: E(): 1.9e-63, 60.77% id in 283 aa, and to Yersinia pestis similar to many ypo1894 or y2416 SWALL:Q9ZC23 (EMBL:AL031866) (286 aa) fasta scores: E(): 1.3e-31, 33.81% id in 278 aa; binding-protein-dependent transport system protein 1666907 3096061 BPSS1233 Burkholderia pseudomallei K96243 binding-protein-dependent transport system protein YP_111241.1 1666029 D 272560 CDS YP_111242.1 53722257 3096150 1666895..1667707 1 NC_006351.1 Similar to Rhizobium meliloti ThuG or rb0313 or smb20327 SWALL:Q9R9Q5 (EMBL:AF175299) (276 aa) fasta scores: E(): 9.7e-24, 35.33% id in 266 aa, and to Rhizobium loti sugar ABC transporter permease mlr4913 SWALL:Q98D11 (EMBL:AP003005) (276 aa) fasta scores: E(): 4.3e-58, 57.99% id in 269 aa, and to Pseudomonas fluorescens probable ABC transporter permease MtlG SWALL:O30493 (EMBL:AF007800) (276 aa) fasta scores: E(): 1.9e-26, 35.24% id in 261 aa; ABC transporter permease 1667707 3096150 BPSS1234 Burkholderia pseudomallei K96243 ABC transporter permease YP_111242.1 1666895 D 272560 CDS YP_111243.1 53722258 3096519 1667729..1668763 1 NC_006351.1 Similar to Candida sp. HA167 xylitol dehydrogenase Xdh SWALL:O74230 (EMBL:AF072541) (353 aa) fasta scores: E(): 2.5e-40, 40.95% id in 337 aa, and to Agrobacterium tumefaciens xylitol dehydrogenase atu4318 or agr_l_1091 SWALL:Q8U7Y1 (EMBL:AE009360) (350 aa) fasta scores: E(): 1.1e-78, 62.35% id in 348 aa, and to Rhizobium loti xylitol mlr4915 SWALL:Q98D10 (EMBL:AP003005) (348 aa) fasta scores: E(): 1.2e-76, 62.75% id in 341 aa; zinc-binding xylitol/sorbitol dehydrogenase 1668763 3096519 BPSS1235 Burkholderia pseudomallei K96243 zinc-binding xylitol/sorbitol dehydrogenase YP_111243.1 1667729 D 272560 CDS YP_111244.1 53722259 3096520 1668767..1669960 1 NC_006351.1 Similar to Bacillus pseudofirmus maltose transportor ATP-binding protein malK SWALL:O87551 (EMBL:AF084104) (366 aa) fasta scores: E(): 1.3e-51, 50.14% id in 355 aa, and to Rhizobium loti sugar ABC transporter ATP-binding protein mlr4917 SWALL:Q98D09 (EMBL:AP003005) (363 aa) fasta scores: E(): 1.2e-60, 58.21% id in 347 aa, and to Brucella melitensis maltose/maltodextrin transport ATP-binding protein malK bmeI1713 SWALL:Q8YF14 (EMBL:AE009605) (363 aa) fasta scores: E(): 2.3e-55, 53.46% id in 361 aa; sugar transporter ATP-binding protein 1669960 3096520 BPSS1236 Burkholderia pseudomallei K96243 sugar transporter ATP-binding protein YP_111244.1 1668767 D 272560 CDS YP_111245.1 53722260 3097228 1669957..1670955 1 NC_006351.1 Similar to Pseudomonas fluorescens activator protein mtlR SWALL:O52770 (EMBL:AF047527) (301 aa) fasta scores: E(): 1.2e-38, 39.33% id in 300 aa, and to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4319 or agr_l_1086 SWALL:Q8U7Y0 (EMBL:AE009360) (305 aa) fasta scores: E(): 3.9e-51, 46.29% id in 283 aa; AraC family transcriptional regulator 1670955 3097228 BPSS1237 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111245.1 1669957 D 272560 CDS YP_111246.1 53722261 3097131 1670952..1672412 1 NC_006351.1 Similar to Klebsiella pneumoniae D-xylulose-kinase DalK SWALL:O52719 (EMBL:AF045245) (487 aa) fasta scores: E(): 4.7e-98, 52.92% id in 478 aa, and to Ralstonia solanacearum D-arabinitol kinase DalK or rsc2128 or rs01476 SWALL:Q8XXI5 (EMBL:AL646068) (491 aa) fasta scores: E(): 9.3e-100, 55.8% id in 482 aa; sugar carbohydrate kinase 1672412 3097131 BPSS1238 Burkholderia pseudomallei K96243 sugar carbohydrate kinase YP_111246.1 1670952 D 272560 CDS YP_111247.1 53722262 3097132 1673068..1674069 1 NC_006351.1 Similar to Pseudomonas putida D-alanyl-D-alanine carboxypeptidase DacA or pp4803 SWALL:AAN70372 (EMBL:AE016792) (386 aa) fasta scores: E(): 3.1e-33, 42.75% id in 276 aa, and to Ralstonia solanacearum probable penicillin-binding Dac or rsc0327 or rs03294 SWALL:Q8Y2K8 (EMBL:AL646058) (397 aa) fasta scores: E(): 4.4e-45, 44.87% id in 312 aa, and to Xanthomonas axonopodis penicillin-binding protein 6 DacC or xac0664 SWALL:Q8PPM2 (EMBL:AE011695) (401 aa) fasta scores: E(): 1.2e-33, 38.8% id in 268 aa; peptidase 1674069 3097132 BPSS1239 Burkholderia pseudomallei K96243 peptidase YP_111247.1 1673068 D 272560 CDS YP_111248.1 53722263 3095351 1674424..1676136 1 NC_006351.1 Similar to Neisseria gonorrhoeae penicillin-binding protein 2 PenA SWALL:PBP2_NEIGO (SWALL:P08149) (581 aa) fasta scores: E(): 1.9e-65, 37.97% id in 574 aa, and to Ralstonia solanacearum probable penicillin-binding 3 precursor pbp-3 transmembrane protein FtsI or rsc2850 or rs00255 SWALL:Q8XVI1 (EMBL:AL646072) (595 aa) fasta scores: E(): 1e-84, 46.4% id in 556 aa, and to Xanthomonas axonopodis penicillin-binding protein 3 FtsI or xac0774 SWALL:AAM35662 (EMBL:AE011708) (622 aa) fasta scores: E(): 2.7e-68, 40.76% id in 547 aa; penicillin-binding protein 1676136 ftsI 3095351 ftsI Burkholderia pseudomallei K96243 penicillin-binding protein YP_111248.1 1674424 D 272560 CDS YP_111249.1 53722264 3095935 complement(1676705..1680961) 1 NC_006351.1 Possible fusion protein. N-terminal region is similar to Synechococcus sp. nitrate reductase NarB SWALL:NARB_SYNP7 (SWALL:P39458) (729 aa) fasta scores: E(): 9.4e-73, 43.09% id in 724 aa. C-terminal region is similar to Escherichia coli sulfite reductase [NADPH] flavoprotein alpha-component CysJ SWALL:CYSJ_ECOLI (SWALL:P38038) (598 aa) fasta scores: E(): 8.1e-70, 39.13% id in 598 aa; bifunctional reductase 1680961 3095935 BPSS1241 Burkholderia pseudomallei K96243 bifunctional reductase YP_111249.1 1676705 R 272560 CDS YP_111250.1 53722265 3096245 complement(1681005..1681355) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O157:H7 nitrite reductase [NAD(P)H] NirD or b3366 or z4727 or ecs4217 SWALL:NIRD_ECOLI (SWALL:P23675) (108 aa) fasta scores: E(): 5.4e-14, 46.29% id in 108 aa, and to Ralstonia solanacearum probable nitrite reductase NADPH NirD or rsp1221 or rs03165 SWALL:Q8XQK3 (EMBL:AL646083) (113 aa) fasta scores: E(): 2.3e-29, 70% id in 110 aa, and to Yersinia pestis nitrite reductase NirD or ypo0160 or y3944 SWALL:Q8ZJE9 (EMBL:AJ414141) (108 aa) fasta scores: E(): 9.3e-17, 48.64% id in 111 aa; nitrite reductase 1681355 3096245 BPSS1242 Burkholderia pseudomallei K96243 nitrite reductase YP_111250.1 1681005 R 272560 CDS YP_111251.1 53722266 3097160 complement(1681393..1683978) 1 NC_006351.1 Similar to Escherichia coli nitrite reductase [NAD(P)H] NirB or b3365 SWALL:NIRB_ECOLI (SWALL:P08201) (847 aa) fasta scores: E(): 3.8e-212, 61.02% id in 839 aa, and to Ralstonia solanacearum probable nitrite reductase NADPH NirB or rsp1222 or rs03166 SWALL:Q8XQK2 (EMBL:AL646083) (852 aa) fasta scores: E(): 0, 78.9% id in 839 aa; nitrite reductase (NAD(P)H) 1683978 nirB 3097160 nirB Burkholderia pseudomallei K96243 nitrite reductase (NAD(P)H) YP_111251.1 1681393 R 272560 CDS YP_111252.1 53722267 3096246 complement(1683992..1685317) 1 NC_006351.1 Similar to Cylindrotheca fusiformis nitrate transporter Nat1 SWALL:Q9SWR7 (EMBL:AF135038) (482 aa) fasta scores: E(): 1.4e-51, 38.79% id in 415 aa, and to Ralstonia solanacearum probable high affinity nitrate transporter transmembrane protein rsp1223 or rs03167 SWALL:Q8XQK1 (EMBL:AL646083) (441 aa) fasta scores: E(): 2e-120, 71.33% id in 436 aa, and to Skeletonema costatum nitrate transporter SWALL:Q8RY50 (EMBL:AY078280) (487 aa) fasta scores: E(): 8.7e-53, 38.39% id in 435 aa; nitrate transporter 1685317 3096246 BPSS1244 Burkholderia pseudomallei K96243 nitrate transporter YP_111252.1 1683992 R 272560 CDS YP_111253.1 53722268 3095745 1686328..1687152 1 NC_006351.1 Similar to Pseudomonas fluorescens uroporphyrin-III c-methyltransferase CobA SWALL:SUMT_PSEFL (SWALL:P37725) (247 aa) fasta scores: E(): 2.2e-32, 46.38% id in 235 aa, and to Xanthomonas campestris uroporphyrin-III c-methyltransferase CysG or xcc2010 SWALL:AAM41299 (EMBL:AE012305) (258 aa) fasta scores: E(): 1.5e-49, 63.55% id in 236 aa, and to Pseudomonas aeruginosa uroporphyrin-III c-methyltransferase CobA or pa1778 SWALL:Q9I2W4 (EMBL:AE004603) (245 aa) fasta scores: E(): 5e-37, 51.31% id in 228 aa; possible alternative start site at codon 41 and codon 44; uroporphyrin-III C-methyltransferase 1687152 3095745 BPSS1245 Burkholderia pseudomallei K96243 uroporphyrin-III C-methyltransferase YP_111253.1 1686328 D 272560 CDS YP_111254.1 53722269 3096027 1687254..1687850 1 NC_006351.1 Similar to Azotobacter vinelandii NasT SWALL:Q44531 (EMBL:X83602) (192 aa) fasta scores: E(): 9.3e-28, 45.69% id in 186 aa, and to Xanthomonas campestris histidine kinase/response regulator hybrid protein NasT or xcc2004 SWALL:AAM41293 (EMBL:AE012305) (190 aa) fasta scores: E(): 2e-36, 60.87% id in 184 aa. Possible alternative translational start site; response regulator protein 1687850 3096027 BPSS1246 Burkholderia pseudomallei K96243 response regulator protein YP_111254.1 1687254 D 272560 CDS YP_111255.1 53722270 3096028 1687847..1688929 1 NC_006351.1 Similar to Klebsiella oxytoca nitrate transporter component NasF SWALL:Q48466 (EMBL:L27431) (418 aa) fasta scores: E(): 3.3e-57, 45.55% id in 349 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1786 SWALL:Q9I2V6 (EMBL:AE004604) (402 aa) fasta scores: E(): 6.3e-65, 53.17% id in 346 aa, and to Xanthomonas campestris nitrate transport ATP-binding protein NasF or xcc2005 SWALL:AAM41294 (EMBL:AE012305) (356 aa) fasta scores: E(): 2.4e-63, 51.03% id in 339 aa, and to Ralstonia solanacearum nitrate transporter protein NasF or rsc0381 or rs03349 SWALL:Q8Y2F5 (EMBL:AL646058) (420 aa) fasta scores: E(): 5.6e-63, 48.98% id in 345 aa; nitrate transporter component 1688929 3096028 BPSS1247 Burkholderia pseudomallei K96243 nitrate transporter component YP_111255.1 1687847 D 272560 CDS YP_111256.1 53722271 3097265 complement(1689206..1689838) 1 NC_006351.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1689838 folE 3097265 folE Burkholderia pseudomallei K96243 GTP cyclohydrolase I YP_111256.1 1689206 R 272560 CDS YP_111257.1 53722272 3095693 1691427..1693619 1 NC_006351.1 lipoprotein 1693619 3095693 BPSS1249 Burkholderia pseudomallei K96243 lipoprotein YP_111257.1 1691427 D 272560 CDS YP_111258.1 53722273 3095694 complement(1694154..1695176) 1 NC_006351.1 Similar to Mycoplana ramosa acetylpolyamine aminohydrolase AphA or Aph SWALL:APHA_MYCRA (SWALL:Q48935) (341 aa) fasta scores: E(): 1e-41, 37.46% id in 339 aa, and to Rhizobium loti acetylpolyamine aminohydrolase mll0103 SWALL:Q98NK3 (EMBL:AP002994) (342 aa) fasta scores: E(): 9.4e-59, 45.85% id in 338 aa, and to Pseudomonas aeruginosa acetylpolyamine aminohydrolase AphA or pa1409 SWALL:Q9I3T5 (EMBL:AE004570) (346 aa) fasta scores: E(): 1.5e-50, 43.64% id in 346 aa; acetylpolyamine aminohydrolase 1695176 3095694 BPSS1250 Burkholderia pseudomallei K96243 acetylpolyamine aminohydrolase YP_111258.1 1694154 R 272560 CDS YP_111259.1 53722274 3095714 complement(1695207..1696586) 1 NC_006351.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1696586 3095714 BPSS1251 Burkholderia pseudomallei K96243 allantoate amidohydrolase YP_111259.1 1695207 R 272560 CDS YP_111260.1 53722275 3095027 complement(1696611..1697945) 1 NC_006351.1 Similar to Escherichia coli shikimate transporter ShiA or b1981 SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 5.4e-52, 36.34% id in 421 aa, and to Pseudomonas aeruginosa probable MFS transporter pa3595 SWALL:Q9HY31 (EMBL:AE004780) (469 aa) fasta scores: E(): 2.9e-66, 44.17% id in 446 aa, and to Rhodococcus sp 3- ohpA SWALL:Q9KH22 (EMBL:AF274045) (468 aa) fasta scores: E(): 8.3e-59, 40.54% id in 439 aa; inner membrane transport protein 1697945 3095027 BPSS1252 Burkholderia pseudomallei K96243 inner membrane transport protein YP_111260.1 1696611 R 272560 CDS YP_111261.1 53722276 3095028 1698134..1699072 1 NC_006351.1 Similar to Thiobacillus denitrificans CbbR SWALL:Q9APD4 (EMBL:AF307090) (316 aa) fasta scores: E(): 5.5e-15, 27.97% id in 286 aa, and to the Acinetobacter lwoffii fragment of hypothetical 14.1 kDa protein SWALL:O86998 (EMBL:U77659) (124 aa) fasta scores: E(): 8.5e-36, 78.51% id in 121 aa, and to Rhizobium meliloti transcriptional regulator, LysR family protein rb0846 or smb21180 SWALL:Q92V68 (EMBL:AL603645) (317 aa) fasta scores: E(): 1.2e-35, 37.93% id in 290 aa; LysR family transcriptional regulator 1699072 3095028 BPSS1253 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111261.1 1698134 D 272560 CDS YP_111262.1 53722277 3095633 complement(1699715..1700722) 1 NC_006351.1 Similar to Bradyrhizobium japonicum fragment of GstR SWALL:O67999 (EMBL:AF007569) (342 aa) fasta scores: E(): 2e-25, 35.25% id in 295 aa, and to Rhizobium meliloti transcriptional regulator protein rb0476 or smb20494 SWALL:Q92W69 (EMBL:AL603643) (298 aa) fasta scores: E(): 6.1e-54, 53.92% id in 293 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2534 SWALL:Q9I0V0 (EMBL:AE004681) (303 aa) fasta scores: E(): 8.8e-53, 53% id in 300 aa. CDS is extended at the C-terminus in comparison to some orthologues; LysR family transcriptional regulator 1700722 3095633 BPSS1255 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111262.1 1699715 R 272560 CDS YP_111263.1 53722278 3095634 1700846..1701589 1 NC_006351.1 Similar to Picea abies short-chain type dehydrogenase/reductase SWALL:SDR1_PICAB (SWALL:Q08632) (271 aa) fasta scores: E(): 8.8e-29, 44.84% id in 252 aa, and to Rhizobium loti probable short chain dehydrogenase mll1981 SWALL:Q98JE4 (EMBL:AP002998) (258 aa) fasta scores: E(): 9.7e-50, 59.83% id in 239 aa, and to Rhizobium meliloti short chain dehydrogenase/reductase rb0475 or smb20493 SWALL:Q92W70 (EMBL:AL603643) (244 aa) fasta scores: E(): 1.4e-48, 58.57% id in 239 aa, and to Xanthomonas axonopodis short chain dehydrogenase xac0083 SWALL:AAM34975 (EMBL:AE011631) (245 aa) fasta scores: E(): 1.3e-47, 58.02% id in 243 aa; short-chain type dehydrogenase/reductase 1701589 3095634 BPSS1256 Burkholderia pseudomallei K96243 short-chain type dehydrogenase/reductase YP_111263.1 1700846 D 272560 CDS YP_111264.1 53722279 3095230 complement(1701899..1703317) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc3367 or rs02642 SWALL:Q8XU27 (EMBL:AL646075) (482 aa) fasta scores: E(): 1.7e-58, 41.97% id in 467 aa, and to Ralstonia solanacearum hypothetical protein rsp1421 or rs03121 SWALL:Q8XQ65 (EMBL:AL646084) (383 aa) fasta scores: E(): 3.2e-12, 29.95% id in 227 aa, and to Mycobacterium tuberculosis hypothetical 38.7 kDa protein Mcr or rv1143 or mt1176 or mtci65.10 SWALL:O06543 (EMBL:Z95584) (395 aa) fasta scores: E(): 5.8e-12, 33.64% id in 211 aa; CoA transferase 1703317 3095230 BPSS1257 Burkholderia pseudomallei K96243 CoA transferase YP_111264.1 1701899 R 272560 CDS YP_111265.1 53722280 3095455 complement(1704390..1705427) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa2197 SWALL:Q9I1S0 (EMBL:AE004646) (345 aa) fasta scores: E(): 4.7e-89, 67.44% id in 344 aa, and to Escherichia coli NADP-dependent oxidoreductase YncB or b1449 SWALL:YNCB_ECOLI (SWALL:P76113) (353 aa) fasta scores: E(): 9.5e-85, 64.53% id in 344 aa, and to Escherichia coli O157:H7 oxidoreductase YncB or z2270 or ecs2053 SWALL:Q8X9W9 (EMBL:AE005361) (376 aa) fasta scores: E(): 1e-84, 64.53% id in 344 aa; oxidoreductase/dehydrogenase 1705427 3095455 BPSS1258 Burkholderia pseudomallei K96243 oxidoreductase/dehydrogenase YP_111265.1 1704390 R 272560 CDS YP_111266.1 53722281 3095456 complement(1705492..1706649) 1 NC_006351.1 Similar to Clostridium acetobutylicum NADH-dependent butanol dehydrogenase B BdhB or cac3298 SWALL:ADHB_CLOAB (SWALL:Q04945) (390 aa) fasta scores: E(): 1.1e-46, 39.72% id in 360 aa, and to Zymomonas mobilis NADH-dependent butanol dehydrogenase YugJ SWALL:Q9Z659 (EMBL:AF102543) (385 aa) fasta scores: E(): 2.8e-101, 67.79% id in 385 aa, and to Salmonella typhi probable alcohol dehydrogenase sty3337 SWALL:Q8Z3Q2 (EMBL:AL627277) (387 aa) fasta scores: E(): 3.2e-95, 63.99% id in 386 aa; iron-containing alcohol dehydrogenase 1706649 3095456 BPSS1259 Burkholderia pseudomallei K96243 iron-containing alcohol dehydrogenase YP_111266.1 1705492 R 272560 CDS YP_111267.1 53722282 3095492 1708563..1710377 1 NC_006351.1 Limited similarity to Escherichia coli O157:H7 plasmid pO157 DNA, complete sequence l7031 SWALL:O82882 (EMBL:AB011549) (898 aa) fasta scores: E(): 4.8e-13, 24.09% id in 332 aa; hypothetical protein 1710377 3095492 BPSS1260 Burkholderia pseudomallei K96243 hypothetical protein YP_111267.1 1708563 D 272560 CDS YP_111268.1 53722283 3097112 complement(1710619..1710951) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp0610 ror rs03757 SWALL:Q8XS71 (EMBL:AL646079) (110 aa) fasta scores: E(): 1.3e-33, 85.32% id in 109 aa, and to Neisseria meningitidis hypothetical protein Nma0986 SWALL:Q9JV57 (EMBL:AL162754) (106 aa) fasta scores: E(): 1.3e-11, 47.05% id in 102 aa, and to Neisseria meningitidis hypothetical protein Nmb0775 SWALL:Q9K047 (EMBL:AE002431) (106 aa) fasta scores: E(): 2.2e-10, 46.8% id in 94 aa; hypothetical protein 1710951 3097112 BPSS1261 Burkholderia pseudomallei K96243 hypothetical protein YP_111268.1 1710619 R 272560 CDS YP_111269.1 53722284 3097113 1711200..1711982 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp1480 or rs03063 SWALL:Q8XQ06 (EMBL:AL646085) (246 aa) fasta scores: E(): 8.9e-39, 60.61% id in 259 aa, and to Xanthomonas axonopodis hypothetical protein Xac3752 SWALL:AAM38595 (EMBL:AE012024) (236 aa) fasta scores: E(): 7.8e-22, 46.61% id in 251 aa, and to Xanthomonas campestris hypothetical protein Xcc3710 SWALL:AAM42968 (EMBL:AE012492) (248 aa) fasta scores: E(): 1.2e-20, 45.07% id in 264 aa; hypothetical protein 1711982 3097113 BPSS1262 Burkholderia pseudomallei K96243 hypothetical protein YP_111269.1 1711200 D 272560 CDS YP_111270.1 53722285 3094936 1711993..1714809 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp1481 or rs03062 SWALL:Q8XQ05 (EMBL:AL646085) (698 aa) fasta scores: E(): 1.6e-108, 53.09% id in 938 aa, and to Xanthomonas campestris hypothetical protein Xcc3711 xcc3711 SWALL:AAM42969 (EMBL:AE012492) (896 aa) fasta scores: E(): 2.9e-71, 48.25% id in 943 aa, and to Xanthomonas axonopodis hypothetical protein Xac3753 SWALL:AAM38596 (EMBL:AE012024) (452 aa) fasta scores: E(): 1.2e-68, 56.05% id in 421 aa; hypothetical protein 1714809 3094936 BPSS1263 Burkholderia pseudomallei K96243 hypothetical protein YP_111270.1 1711993 D 272560 CDS YP_111271.1 53722286 3094888 1714806..1715453 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rs03061 SWALL:Q8XQ04 (EMBL:AL646085) (215 aa) fasta scores: E(): 1.8e-65, 81.86% id in 215 aa. C-terminus is similar to the C-terminal region of Bacillus subtilis chemotaxis MotB protein SWALL:MOTB_BACSU (SWALL:P28612) (261 aa) fasta scores: E(): 5.9e-05, 30% id in 130 aa; hypothetical protein 1715453 3094888 BPSS1264 Burkholderia pseudomallei K96243 hypothetical protein YP_111271.1 1714806 D 272560 CDS YP_111272.1 53722287 3094889 1715446..1716288 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp1483 or rs03060 SWALL:Q8XQ03 (EMBL:AL646085) (219 aa) fasta scores: E(): 5.4e-14, 47.14% id in 280 aa, and to Xanthomonas campestris hypothetical protein Xcc3713 xcc3713 SWALL:Q8P4J4 (EMBL:AE012492) (237 aa) fasta scores: E(): 3.2e-07, 38.54% id in 262 aa, and to Xanthomonas axonopodis hypothetical protein Xac3755 SWALL:Q8PG62 (EMBL:AE012024) (440 aa) fasta scores: E(): 2e-06, 35.86% id in 276 aa. The coding sequence is contains a long repeat sequence (gcgcct x12) near the N-terminus; hypothetical protein 1716288 3094889 BPSS1265 Burkholderia pseudomallei K96243 hypothetical protein YP_111272.1 1715446 D 272560 CDS YP_111273.1 53722288 3095669 complement(1716573..1719788) 1 NC_006351.1 Similar to Bacillus subtilis siderophore synthase DhbF SWALL:Q9R9I2 (EMBL:AF184977) (2378 aa) fasta scores: E(): 1.1e-119, 41.63% id in 1052 aa, and to Streptomyces chrysomallus actinomycin synthetase II AcmB SWALL:O68487 (EMBL:AF047717) (2611 aa) fasta scores: E(): 3.6e-165, 49.07% id in 1076 aa, and to Pseudomonas syringae syringopeptin synthetase SypA SWALL:Q9FDB3 (EMBL:AF286216) (1261 aa) fasta scores: E(): 5.2e-123, 39.61% id in 1083 aa; peptide/siderophore synthetase 1719788 3095669 BPSS1266 Burkholderia pseudomallei K96243 peptide/siderophore synthetase YP_111273.1 1716573 R 272560 CDS YP_111274.1 53722289 3095936 complement(1719868..1720074) 1 NC_006351.1 Similar to Streptomyces avermitilis MbtH-like protein SWALL:Q93GZ2 (EMBL:AB070956) (72 aa) fasta scores: E(): 3.6e-14, 53.84% id in 65 aa, and to Amycolatopsis mediterranei hypothetical 7.8 kDa protein SWALL:Q939Y8 (EMBL:Y16952) (69 aa) fasta scores: E(): 7.7e-15, 61.9% id in 63 aa; balhimycin biosynthetic protein MbtH 1720074 3095936 BPSS1267 Burkholderia pseudomallei K96243 balhimycin biosynthetic protein MbtH YP_111274.1 1719868 R 272560 CDS YP_111275.1 53722290 3095937 complement(1720093..1721382) 1 NC_006351.1 Similar to Escherichia coli tetracycline resistance protein, class A TetA SWALL:TCR1_ECOLI (SWALL:P02982) (399 aa) fasta scores: E(): 4.6e-38, 35.75% id in 400 aa, and to Xanthomonas axonopodis tetracycline-efflux transporter TetA or xac4295 SWALL:AAM39125 (EMBL:AE012083) (421 aa) fasta scores: E(): 3.8e-46, 40.75% id in 400 aa, and to Xanthomonas campestris tetracycline-efflux transporter TetA or xcc4156 SWALL:AAM43372 (EMBL:AE012541) (420 aa) fasta scores: E(): 5.9e-43, 36.85% id in 407 aa; efflux system protein 1721382 3095937 BPSS1268 Burkholderia pseudomallei K96243 efflux system protein YP_111275.1 1720093 R 272560 CDS YP_111276.1 53722291 3097055 complement(1721387..1734097) 1 NC_006351.1 Similar to C-terminus of Aphanizomenon ovalisporum peptide synthetase AoaB SWALL:AAM33468 (EMBL:AF395828) (1869 aa) fasta scores: E(): 5.4e-125, 35.68% id in 1841 aa, and to C-terminus of Stigmatella aurantiaca MtaD SWALL:Q9RFK8 (EMBL:AF188287) (3291 aa) fasta scores: E(): 7.3e-124, 29.54% id in 3368 aa; peptide synthase/polyketide synthase 1734097 3097055 BPSS1269 Burkholderia pseudomallei K96243 peptide synthase/polyketide synthase YP_111276.1 1721387 R 272560 CDS YP_111277.1 53722292 3095888 complement(1734147..1734950) 1 NC_006351.1 Limited similarity to Caulobacter crescentus hypothetical protein Cc3057 SWALL:Q9A3Z3 (EMBL:AE005969) (261 aa) fasta scores: E(): 0.00043, 28.19% id in 227 aa; hypothetical protein 1734950 3095888 BPSS1270 Burkholderia pseudomallei K96243 hypothetical protein YP_111277.1 1734147 R 272560 CDS YP_111278.1 53722293 3095889 complement(1735403..1735723) 1 NC_006351.1 Similar to Streptomyces avermitilis hypothetical protein SWALL:Q93HB6 (EMBL:AB070946) (88 aa) fasta scores: E(): 4.5e-11, 53.33% id in 75 aa, and to Anabaena sp. hypothetical protein Alr4059 alr4059 SWALL:Q8YPY1 (EMBL:AP003595) (126 aa) fasta scores: E(): 1.2e-05, 34.61% id in 78 aa; phosphopantetheine binding protein 1735723 3095889 BPSS1271 Burkholderia pseudomallei K96243 phosphopantetheine binding protein YP_111278.1 1735403 R 272560 CDS YP_111279.1 53722294 3095324 complement(1735704..1737497) 1 NC_006351.1 Similar to Streptomyces avermitilis acyl-CoA dehydrogenase SWALL:Q93HB7 (EMBL:AB070946) (609 aa) fasta scores: E(): 1.3e-71, 47.28% id in 590 aa, and to Anabaena sp. hypothetical protein Alr4058 alr4058 SWALL:Q8YPY2 (EMBL:AP003595) (602 aa) fasta scores: E(): 1.7e-37, 31.36% id in 577 aa, and to Rhizobium meliloti isovaleryl-CoA dehydrogenase IvdH or rb0700 or smb21121 SWALL:Q92VK1 (EMBL:AL603644) (387 aa) fasta scores: E(): 3.1e-13, 28% id in 375 aa; acyl-CoA dehydrogenase 1737497 3095324 BPSS1272 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_111279.1 1735704 R 272560 CDS YP_111280.1 53722295 3095542 complement(1737494..1739254) 1 NC_006351.1 Similar to Streptomyces avermitilis acyl-CoA dehydrogenase SWALL:Q93HB7 (EMBL:AB070946) (609 aa) fasta scores: E(): 1.2e-53, 36.45% id in 587 aa, and to Anabaena sp. hypothetical protein Alr4058 alr4058 SWALL:Q8YPY2 (EMBL:AP003595) (602 aa) fasta scores: E(): 1.1e-65, 38.39% id in 586 aa; acyl-CoA dehydrogenase 1739254 3095542 BPSS1273 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_111280.1 1737494 R 272560 CDS YP_111281.1 53722296 3095543 complement(1739251..1741083) 1 NC_006351.1 Similar to N-terminus of Myxococcus xanthus saframycin Mx1 synthetase B SafB SWALL:Q50857 (EMBL:U24657) (1770 aa) fasta scores: E(): 1.5e-78, 43.85% id in 586 aa, and to entire protein Anabaena sp. hypothetical protein Alr4057 alr4057 SWALL:Q8YPY3 (EMBL:AP003595) (602 aa) fasta scores: E(): 1.5e-75, 41.27% id in 596 aa, and to N-terminus of Streptomyces coelicolor polyketide synthase sco5892 or sc3f7.12 SWALL:O54155 (EMBL:AL939125) (2297 aa) fasta scores: E(): 2.2e-75, 43.69% id in 579 aa; polyketide synthase 1741083 3095543 BPSS1274 Burkholderia pseudomallei K96243 polyketide synthase YP_111281.1 1739251 R 272560 CDS YP_111282.1 53722297 3096843 1741680..1742204 1 NC_006351.1 Similar to Pseudomonas syringae RNA polymerase sigma factor HrpL SWALL:HRPL_PSESY (SWALL:P37929) (184 aa) fasta scores: E(): 7e-10, 31.09% id in 164 aa, and to Ralstonia solanacearum probable RNA polymerase sigma factor transcription regulator protein rsp1651 or rs02210 SWALL:Q8XPI9 (EMBL:AL646086) (208 aa) fasta scores: E(): 4.6e-14, 38.23% id in 170 aa, and to Rhizobium meliloti rpoE6 RNA polymerase sigma factor rpoE6 or ra0075 or sma0143 SWALL:Q930W9 (EMBL:AE007202) (201 aa) fasta scores: E(): 8.2e-14, 37.03% id in 162 aa; RNA polymerase sigma factor 1742204 3096843 BPSS1275 Burkholderia pseudomallei K96243 RNA polymerase sigma factor YP_111282.1 1741680 D 272560 CDS YP_111283.1 53722298 3095680 1742983..1743573 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc3277 or rs02506 SWALL:Q8XUB4 (EMBL:AL646074) (195 aa) fasta scores: E(): 5.3e-51, 73.95% id in 192 aa, and to Streptomyces coelicolor hypothetical protein sco1302 or scbac36f5.13C SWALL:Q93IW8 (EMBL:AL939108) (208 aa) fasta scores: E(): 4.2e-21, 40.41% id in 193 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0168 SWALL:Q9I6W4 (EMBL:AE004454) (196 aa) fasta scores: E(): 3.3e-18, 39.47% id in 190 aa; hypothetical protein 1743573 3095680 BPSS1276 Burkholderia pseudomallei K96243 hypothetical protein YP_111283.1 1742983 D 272560 CDS YP_111284.1 53722299 3096702 1743703..1744773 1 NC_006351.1 Similar to Ralstonia metallidurans CnrT protein SWALL:Q9L3G0 (EMBL:AJ276513) (351 aa) fasta scores: E(): 3.5e-84, 65.16% id in 356 aa, and to Ralstonia solanacearum probable cobalt-nickel-resistance system transmembrane protein CnrT or rsp1044 or rs02381 SWALL:Q8XR24 (EMBL:AL646082) (352 aa) fasta scores: E(): 1.1e-86, 68.07% id in 354 aa; cobalt-nickel-resistance system transmembrane protein 1744773 cnrT 3096702 cnrT Burkholderia pseudomallei K96243 cobalt-nickel-resistance system transmembrane protein YP_111284.1 1743703 D 272560 CDS YP_111285.1 53722300 3096218 complement(1745502..1746800) 1 NC_006351.1 Similar to Deinococcus radiodurans hypothetical protein Dr1724 SWALL:Q9RTN3 (EMBL:AE002014) (441 aa) fasta scores: E(): 2.5e-08, 27% id in 437 aa, and to Deinococcus radiodurans orf509E (fragment) SWALL:O83031 (EMBL:AB016803) (324 aa) fasta scores: E(): 1.2e-07, 28.34% id in 321 aa; oxidoreductase 1746800 3096218 BPSS1278 Burkholderia pseudomallei K96243 oxidoreductase YP_111285.1 1745502 R 272560 CDS YP_111286.1 53722301 3096017 1746879..1747595 1 NC_006351.1 Weakly similar to Rhizobium loti MLL5233 protein SWALL:Q98CA4 (EMBL:AP003006) (219 aa) fasta scores: E(): 4.6e-05, 25.72% id in 206 aa. N-terminus similar to the N-terminal region of Anabaena sp. transcriptional regulator SWALL:Q8YQT9 (EMBL:AP003594) (192 aa) fasta scores: E(): 9.8e-10, 34% id in 150 aa; TetR family regulatory protein 1747595 3096017 BPSS1278a Burkholderia pseudomallei K96243 TetR family regulatory protein YP_111286.1 1746879 D 272560 CDS YP_111287.1 53722302 3095570 complement(1747574..1749181) 1 NC_006351.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 1749181 3095570 BPSS1279 Burkholderia pseudomallei K96243 threonine dehydratase YP_111287.1 1747574 R 272560 CDS YP_111288.1 53722303 3095571 1749591..1749848 1 NC_006351.1 hypothetical protein 1749848 3095571 BPSS1280 Burkholderia pseudomallei K96243 hypothetical protein YP_111288.1 1749591 D 272560 CDS YP_111289.1 53722304 3095246 complement(1749935..1750861) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2428 SWALL:Q9I154 (EMBL:AE004670) (304 aa) fasta scores: E(): 2.3e-90, 74.57% id in 295 aa, and to Rhizobium meliloti hypothetical protein ra0092 or sma0172 SWALL:Q930V2 (EMBL:AE007203) (306 aa) fasta scores: E(): 7.9e-73, 62.75% id in 298 aa; hypothetical protein 1750861 3095246 BPSS1281 Burkholderia pseudomallei K96243 hypothetical protein YP_111289.1 1749935 R 272560 CDS YP_111290.1 53722305 3095247 complement(1751486..1752982) 1 NC_006351.1 lipoprotein 1752982 3095247 BPSS1282 Burkholderia pseudomallei K96243 lipoprotein YP_111290.1 1751486 R 272560 CDS YP_111291.1 53722306 3095420 complement(1752996..1754291) 1 NC_006351.1 Similar to Klebsiella pneumoniae MceH SWALL:Q93GK4 (EMBL:AF063590) (413 aa) fasta scores: E(): 1.6e-14, 24.01% id in 404 aa, and to Xylella fastidiosa colicin V secretion protein xf1216 SWALL:Q9PE12 (EMBL:AE003955) (420 aa) fasta scores: E(): 7.5e-24, 28.96% id in 397 aa, and to Pseudomonas aeruginosa probable secretion protein pa4142 SWALL:Q9HWN9 (EMBL:AE004831) (418 aa) fasta scores: E(): 1.9e-20, 26.23% id in 404 aa. Possible alternative translational start site; hypothetical protein 1754291 3095420 BPSS1283 Burkholderia pseudomallei K96243 hypothetical protein YP_111291.1 1752996 R 272560 CDS YP_111292.1 53722307 3095621 complement(1754304..1755326) 1 NC_006351.1 hypothetical protein 1755326 3095621 BPSS1284 Burkholderia pseudomallei K96243 hypothetical protein YP_111292.1 1754304 R 272560 CDS YP_111293.1 53722308 3095622 complement(1755323..1757467) 1 NC_006351.1 Similar to Klebsiella pneumoniae microcin MceG SWALL:Q93GK5 (EMBL:AF063590) (698 aa) fasta scores: E(): 2.3e-56, 29.89% id in 679 aa, and to Pseudomonas aeruginosa probable toxin transporter pa4143 SWALL:Q9HWN8 (EMBL:AE004831) (719 aa) fasta scores: E(): 1.8e-70, 33.9% id in 696 aa, and to Xylella fastidiosa colicin V secretion ABC transporter ATP-binding protein xf1220 SWALL:Q9PE08 (EMBL:AE003955) (707 aa) fasta scores: E(): 2.2e-67, 34% id in 700 aa; peptidase 1757467 3095622 BPSS1285 Burkholderia pseudomallei K96243 peptidase YP_111293.1 1755323 R 272560 CDS YP_111294.1 53722309 3095038 complement(1757583..1757801) 1 NC_006351.1 hypothetical protein 1757801 3095038 BPSS1286 Burkholderia pseudomallei K96243 hypothetical protein YP_111294.1 1757583 R 272560 CDS YP_111295.1 53722310 3095982 complement(1758015..1758188) 1 NC_006351.1 hypothetical protein 1758188 3095982 BPSS1286a Burkholderia pseudomallei K96243 hypothetical protein YP_111295.1 1758015 R 272560 CDS YP_111296.1 53722311 3095983 1758557..1759897 1 NC_006351.1 Similar to Enterobacter aerogenes TolC protein precursor SWALL:Q8VLQ0 (EMBL:AJ421426) (486 aa) fasta scores: E(): 1e-19, 26.16% id in 451 aa, and to Ralstonia solanacearum probable porin rsc0695 or rs01600 SWALL:Q8Y1J5 (EMBL:AL646060) (484 aa) fasta scores: E(): 4.3e-25, 27.8% id in 446 aa; outer membrane efflux protein 1759897 3095983 BPSS1287 Burkholderia pseudomallei K96243 outer membrane efflux protein YP_111296.1 1758557 D 272560 CDS YP_111297.1 53722312 3095085 complement(1760116..1761837) 1 NC_006351.1 Similar to Helicobacter pylori gamma-glutamyltranspeptidase hp1118 SWALL:O25743 (EMBL:AE000618) (567 aa) fasta scores: E(): 1.3e-83, 42.43% id in 568 aa, and to Caulobacter crescentus gamma-glutamyltransferase cc0104 SWALL:Q9ABW6 (EMBL:AE005685) (583 aa) fasta scores: E(): 3.3e-132, 63.54% id in 565 aa, and to Pseudomonas aeruginosa gamma-glutamyltranspeptidase precursor Ggt or pa1338 SWALL:Q9I406 (EMBL:AE004563) (557 aa) fasta scores: E(): 3.2e-130, 63.04% id in 552 aa; gamma-glutamyltransferase 1 1761837 3095085 BPSS1288 Burkholderia pseudomallei K96243 gamma-glutamyltransferase 1 YP_111297.1 1760116 R 272560 CDS YP_111298.1 53722313 3095284 1762739..1763257 1 NC_006351.1 hypothetical protein 1763257 3095284 BPSS1289 Burkholderia pseudomallei K96243 hypothetical protein YP_111298.1 1762739 D 272560 CDS YP_111299.1 53722314 3095285 1763600..1764118 1 NC_006351.1 hypothetical protein 1764118 3095285 BPSS1290 Burkholderia pseudomallei K96243 hypothetical protein YP_111299.1 1763600 D 272560 CDS YP_111300.1 53722315 3095462 1764795..1769594 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable ATP-dependent DNA helicase pa3272 SWALL:Q9HYW9 (EMBL:AE004749) (1448 aa) fasta scores: E(): 4.7e-132, 63.01% id in 1598 aa, and to Xanthomonas axonopodis ATP-dependent DNA helicase Lhr1 or xac2450 SWALL:AAM37301 (EMBL:AE011882) (1480 aa) fasta scores: E(): 1.3e-123, 57.92% id in 1597 aa; DEAD/DEAH box helicase 1769594 3095462 BPSS1291 Burkholderia pseudomallei K96243 DEAD/DEAH box helicase YP_111300.1 1764795 D 272560 CDS YP_111301.1 53722316 3095434 1770212..1771507 1 NC_006351.1 Similar to Bacillus subtilis amino acid permease YecA protein SWALL:O34560 (EMBL:Z99107) (463 aa) fasta scores: E(): 7e-40, 35.74% id in 414 aa, and to Escherichia coli O157:H7 transport YjeH or z5746 or ecs5122 SWALL:Q8XDR1 (EMBL:AE005648) (418 aa) fasta scores: E(): 3e-29, 34.21% id in 418 aa, and to Escherichia coli hypothetical protein YjeH or b4141 SWALL:YJEH_ECOLI (SWALL:P39277) (418 aa) fasta scores: E(): 3e-29, 34.21% id in 418 aa; amino acid permease 1771507 3095434 BPSS1292 Burkholderia pseudomallei K96243 amino acid permease YP_111301.1 1770212 D 272560 CDS YP_111302.1 53722317 3095435 1771895..1772497 1 NC_006351.1 Similar to Xanthomonas campestris hypothetical protein Xcc2424 SWALL:Q8P824 (EMBL:AE012353) (150 aa) fasta scores: E(): 2.8e-13, 55.17% id in 87 aa, and to Xanthomonas axonopodis hypothetical protein Xac2556 SWALL:Q8PJH5 (EMBL:AE011896) (124 aa) fasta scores: E(): 7.1e-12, 50.6% id in 83 aa; lipoprotein 1772497 3095435 BPSS1293 Burkholderia pseudomallei K96243 lipoprotein YP_111302.1 1771895 D 272560 CDS YP_111303.1 53722318 3095525 complement(1772610..1773047) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa1354 SWALL:Q9I3Z0 (EMBL:AE004565) (141 aa) fasta scores: E(): 1e-36, 67.85% id in 140 aa, and to Agrobacterium tumefaciens hypothetical protein atu0851 or agr_c_1556 SWALL:Q8UH34 (EMBL:AE009052) (140 aa) fasta scores: E(): 8.5e-34, 62.85% id in 140 aa; hypothetical protein 1773047 3095525 BPSS1294 Burkholderia pseudomallei K96243 hypothetical protein YP_111303.1 1772610 R 272560 CDS YP_111304.1 53722319 3096312 1773286..1774404 1 NC_006351.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1774404 aroG 3096312 aroG Burkholderia pseudomallei K96243 phospho-2-dehydro-3-deoxyheptonate aldolase YP_111304.1 1773286 D 272560 CDS YP_111305.1 53722320 3094957 complement(1774902..1775570) 1 NC_006351.1 Similar to Acinetobacter sp. ADP1 O-methyltransferase-like protein SWALL:Q93D14 (EMBL:AF400582) (222 aa) fasta scores: E(): 7.2e-33, 47.27% id in 220 aa, and to Streptomyces coelicolor O-methyltransferase sco2338 or scc53.29 SWALL:Q9KXI2 (EMBL:AL939112) (223 aa) fasta scores: E(): 1.8e-41, 56.5% id in 223 aa, and to Rhizobium loti O-methyltransferase Mlr0279 SWALL:Q98N64 (EMBL:AP002994) (221 aa) fasta scores: E(): 1.2e-39, 53.18% id in 220 aa; O-methyltransferase-like protein 1775570 3094957 BPSS1296 Burkholderia pseudomallei K96243 O-methyltransferase-like protein YP_111305.1 1774902 R 272560 CDS YP_111306.1 53722321 3094958 complement(1776176..1777645) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp1524 or rs04801 SWALL:Q8XPW2 (EMBL:AL646085) (505 aa) fasta scores: E(): 2.2e-65, 39.58% id in 480 aa, and to Ralstonia solanacearum transmembrane protein rsp0398 or rs00826 SWALL:Q8XSR9 (EMBL:AL646078) (488 aa) fasta scores: E(): 2.9e-62, 39.62% id in 477 aa; regulatory protein 1777645 3094958 BPSS1297 Burkholderia pseudomallei K96243 regulatory protein YP_111306.1 1776176 R 272560 CDS YP_111307.1 53722322 3095336 1778359..1779030 1 NC_006351.1 hypothetical protein 1779030 3095336 BPSS1298 Burkholderia pseudomallei K96243 hypothetical protein YP_111307.1 1778359 D 272560 CDS YP_111308.1 53722323 3094910 complement(1779761..1780765) 1 NC_006351.1 Similar to Agrobacterium tumefaciens pca operon transcriptional activator PcaQ or atu4543 or agr_l_649 SWALL:PCAQ_AGRT5 (SWALL:P52668) (311 aa) fasta scores: E(): 1.7e-38, 41.74% id in 309 aa, and to Rhizobium meliloti transcriptional activator of the Pca operon, LysR family protein pcaq or rb1492 or smb20580 SWALL:Q92TL9 (EMBL:AL603647) (313 aa) fasta scores: E(): 2.9e-40, 43.18% id in 308 aa, and to Ralstonia solanacearum probable transcriptional regulatory DNA-binding transcription regulator protein PcaQ or rsc1440 or rs03867 SWALL:Q8XZG1 (EMBL:AL646064) (319 aa) fasta scores: E(): 3.9e-40, 45.27% id in 307 aa; LysR family transcriptional regulator 1780765 3094910 BPSS1299 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111308.1 1779761 R 272560 CDS YP_111309.1 53722324 3095333 1780873..1781577 1 NC_006351.1 Similar to Burkholderia cepacia protocatechuate 3,4-dioxygenase beta chain PcaH SWALL:PCXB_BURCE (SWALL:P15110) (235 aa) fasta scores: E(): 9.7e-88, 91.06% id in 235 aa, and to Pseudomonas marginata protocatechuate 3,4-dioxygenase beta-subunit PcaH SWALL:Q9ZB85 (EMBL:U33634) (234 aa) fasta scores: E(): 5.5e-87, 88.46% id in 234 aa, and to Acinetobacter lwoffii protocatechuate 3,4-dioxygenase beta subunit PcaH SWALL:Q8KQ86 (EMBL:AY099487) (226 aa) fasta scores: E(): 1.1e-79, 84.51% id in 226 aa; protocatechuate 3,4-dioxygenase 1781577 pcaH 3095333 pcaH Burkholderia pseudomallei K96243 protocatechuate 3,4-dioxygenase YP_111309.1 1780873 D 272560 CDS YP_111310.1 53722325 3095358 1781580..1782173 1 NC_006351.1 Similar to Burkholderia cepacia protocatechuate 3,4-dioxygenase alpha chain PcaG SWALL:PCXA_BURCE (SWALL:P15109) (197 aa) fasta scores: E(): 4.3e-56, 74.11% id in 197 aa, and to Pseudomonas marginata protocatechuate 3,4-dioxygenase alpha-subunit PcaG SWALL:Q9ZB84 (EMBL:U33634) (196 aa) fasta scores: E(): 1.9e-57, 74.61% id in 197 aa; protocatechuate 3,4-dioxygenase alpha chain 1782173 pcaG 3095358 pcaG Burkholderia pseudomallei K96243 protocatechuate 3,4-dioxygenase alpha chain YP_111310.1 1781580 D 272560 CDS YP_111311.1 53722326 3094911 complement(1782617..1783444) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1384 or rs04667 SWALL:Q8XZL1 (EMBL:AL646064) (271 aa) fasta scores: E(): 3.7e-59, 65.45% id in 275 aa, and to Deinococcus radiodurans peptide ABC transporter dr1843 SWALL:Q9RTC2 (EMBL:AE002024) (283 aa) fasta scores: E(): 2.2e-24, 40.28% id in 283 aa, and to Streptomyces coelicolor transport associated protein sco6486 or sc9c7.22 SWALL:Q9ZBI8 (EMBL:AL939128) (277 aa) fasta scores: E(): 2.8e-19, 32.47% id in 271 aa; peptidase 1783444 3094911 BPSS1302 Burkholderia pseudomallei K96243 peptidase YP_111311.1 1782617 R 272560 CDS YP_111312.1 53722327 3096850 complement(1783444..1784790) 1 NC_006351.1 Similar to Ralstonia solanacearum probable D-aminopeptidase rsc1383 or rs04666 SWALL:Q8XZL2 (EMBL:AL646064) (341 aa) fasta scores: E(): 5.3e-39, 57.62% id in 413 aa, and to Brucella melitensis D-aminopeptidase bmeII0741 SWALL:Q8YBZ5 (EMBL:AE009708) (340 aa) fasta scores: E(): 5.9e-27, 41.14% id in 418 aa, and to Rhizobium loti probable D-aminopeptidase mlr2477 SWALL:Q98IB6 (EMBL:AP002999) (343 aa) fasta scores: E(): 8.3e-27, 41.53% id in 431 aa. CDS contains addition internal residue in comparison to orthologues. CDS is extended at the N-terminus in comparison to orthologues; aminopeptidase 1784790 3096850 BPSS1303 Burkholderia pseudomallei K96243 aminopeptidase YP_111312.1 1783444 R 272560 CDS YP_111313.1 53722328 3097025 complement(1784790..1785698) 1 NC_006351.1 Similar to Bacillus firmus dipeptide transport system permease DppC SWALL:DPPC_BACFI (SWALL:P94312) (304 aa) fasta scores: E(): 4.2e-46, 43.28% id in 298 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1382 or rs04665 SWALL:Q8XZL3 (EMBL:AL646064) (299 aa) fasta scores: E(): 1.5e-93, 82.49% id in 297 aa, and to Escherichia coli O157:H7 transport system permease z1056 or ecs0911 SWALL:Q8X6V6 (EMBL:AE005264) (303 aa) fasta scores: E(): 2e-84, 77.03% id in 283 aa; ABC transport system permease 1785698 3097025 BPSS1304 Burkholderia pseudomallei K96243 ABC transport system permease YP_111313.1 1784790 R 272560 CDS YP_111314.1 53722329 3097026 complement(1785706..1786626) 1 NC_006351.1 Similar to Agrobacterium tumefaciens MoaB SWALL:O50268 (EMBL:AF242881) (313 aa) fasta scores: E(): 1e-42, 37.89% id in 314 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1381 or rs04750 SWALL:Q8XZL4 (EMBL:AL646064) (307 aa) fasta scores: E(): 2.5e-96, 80.32% id in 305 aa, and to Salmonella typhi hypothetical ABC transporter permease ylic or sty0889 SWALL:Q8Z862 (EMBL:AL627268) (306 aa) fasta scores: E(): 3.9e-91, 76.14% id in 306 aa; ABC transport permease 1786626 3097026 BPSS1305 Burkholderia pseudomallei K96243 ABC transport permease YP_111314.1 1785706 R 272560 CDS YP_111315.1 53722330 3096450 complement(1786763..1788325) 1 NC_006351.1 Similar to Agrobacterium tumefaciens mannopinic acid permease AgaA SWALL:O50260 (EMBL:AF242881) (509 aa) fasta scores: E(): 7.9e-42, 30.29% id in 505 aa, and to Ralstonia solanacearum probable substate-binding periplasmic rsc1380 or rs04663 SWALL:Q8XZL5 (EMBL:AL646064) (517 aa) fasta scores: E(): 2.5e-150, 73.58% id in 511 aa, and to Escherichia coli O157:H7 transport protein z1054 or ecs0909 SWALL:Q8X6V9 (EMBL:AE005264) (512 aa) fasta scores: E(): 1.3e-128, 63.58% id in 508 aa; ABC transporter substrate-binding protein 1788325 3096450 BPSS1306 Burkholderia pseudomallei K96243 ABC transporter substrate-binding protein YP_111315.1 1786763 R 272560 CDS YP_111316.1 53722331 3096385 complement(1788561..1790600) 1 NC_006351.1 Similar to Agrobacterium tumefaciens mannopinic and agropinic acid catabolism protein MoaD SWALL:O50270 (EMBL:AF242881) (588 aa) fasta scores: E(): 1.8e-48, 48.4% id in 659 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1379 or rs04662 SWALL:Q8XZL6 (EMBL:AL646064) (627 aa) fasta scores: E(): 2.2e-76, 69.08% id in 676 aa, and to Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein rv1281c rv1281c or mt1318 or mtcy50.01 SWALL:YC81_MYCTU (SWALL:Q11040) (612 aa) fasta scores: E(): 4.2e-66, 46.01% id in 628 aa; ATP-binding ABC transporter protein 1790600 3096385 BPSS1307 Burkholderia pseudomallei K96243 ATP-binding ABC transporter protein YP_111316.1 1788561 R 272560 CDS YP_111317.1 53722332 3096386 complement(1790641..1791687) 1 NC_006351.1 Similar to Hordeum vulgare asparaginase SWALL:Q9FUG8 (EMBL:AF308474) (333 aa) fasta scores: E(): 5.1e-26, 39.45% id in 327 aa, and to Ralstonia solanacearum probable L-asparaginase precursor protein rsc1378 or rs04661 SWALL:Q8XZL7 (EMBL:AL646064) (320 aa) fasta scores: E(): 8.2e-30, 62.89% id in 345 aa, and to Oryza sativa L-asparaginase h0212b02.5 SWALL:Q9FSS5 (EMBL:AL442007) (333 aa) fasta scores: E(): 1.1e-27, 40.66% id in 332 aa; asparaginase 1791687 3096386 BPSS1308 Burkholderia pseudomallei K96243 asparaginase YP_111317.1 1790641 R 272560 CDS YP_111318.1 53722333 3095872 complement(1791684..1792646) 1 NC_006351.1 Similar to Yersinia pestis hex regulon repressor HexR or ypo2065 SWALL:Q8ZET8 (EMBL:AJ414151) (289 aa) fasta scores: E(): 2.5e-09, 27.82% id in 266 aa, and to Ralstonia solanacearum hypothetical protein rsc1377 or rs04660 SWALL:Q8XZL8 (EMBL:AL646064) (332 aa) fasta scores: E(): 1.7e-58, 57.14% id in 308 aa, and to Clostridium perfringens probable transcriptional regulator cpe1082 SWALL:Q8XLF9 (EMBL:AP003189) (291 aa) fasta scores: E(): 1.8e-16, 30.79% id in 276 aa; transcriptional regulator 1792646 3095872 BPSS1309 Burkholderia pseudomallei K96243 transcriptional regulator YP_111318.1 1791684 R 272560 CDS YP_111319.1 53722334 3097064 1792979..1795009 1 NC_006351.1 Similar to Rhizobium meliloti glycine/proline betaine transporter betP SWALL:Q8VTN3 (EMBL:AF323271) (706 aa) fasta scores: E(): 7.9e-120, 48.71% id in 663 aa, and to Pasteurella multocida hypothetical protein Pm1791 pm1791 SWALL:Q9CK43 (EMBL:AE006216) (668 aa) fasta scores: E(): 3.1e-131, 50% id in 658 aa, and to Haemophilus influenzae probable transport protein Hi1706 hi1706 SWALL:YH06_HAEIN (SWALL:P45335) (669 aa) fasta scores: E(): 1.9e-123, 47.59% id in 664 aa; BCCT (betaine/carnitine/choline) family transporter 1795009 3097064 BPSS1310 Burkholderia pseudomallei K96243 BCCT (betaine/carnitine/choline) family transporter YP_111319.1 1792979 D 272560 CDS YP_111320.1 53722335 3095112 complement(1795244..1796458) 1 NC_006351.1 Similar to Pseudomonas marginata esterase EstB SWALL:Q9KX40 (EMBL:U33634) (392 aa) fasta scores: E(): 1.9e-96, 68.38% id in 389 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2315 SWALL:Q9I1G0 (EMBL:AE004657) (391 aa) fasta scores: E(): 2.3e-68, 52.46% id in 385 aa, and to Pseudomonas sp triacylglycerol lipase lip-1 SWALL:Q9KX30 (EMBL:X61673) (333 aa) fasta scores: E(): 1.4e-59, 53.65% id in 328 aa; esterase 1796458 estA 3095112 estA Burkholderia pseudomallei K96243 esterase YP_111320.1 1795244 R 272560 CDS YP_111321.1 53722336 3097065 1796638..1796973 1 NC_006351.1 Similar to Chromobacterium violaceum ATCC 12472 hypothetical protein SWALL:Q7P1Q6 (EMBL:AE016910) (96 aa) fasta scores: E(): 8.1e-09, 46.07% id in 102 aa; hypothetical protein 1796973 3097065 BPSS1311A Burkholderia pseudomallei K96243 hypothetical protein YP_111321.1 1796638 D 272560 CDS YP_111322.1 53722337 3095031 1797052..1798512 1 NC_006351.1 Similar to the N-terminal regions of Arabidopsis thaliana hypothetical 59.0 kDa protein at3g03520 SWALL:Q8VZ53 (EMBL:AY065242) (523 aa) fasta scores: E(): 4.6e-40, 35.03% id in 471 aa, and to Arabidopsis thaliana t21p5.6 protein t21p5.6 or at3g03520 SWALL:Q9SRQ6 (EMBL:AC009895) (523 aa) fasta scores: E(): 4.6e-40, 35.03% id in 471 aa; hypothetical protein 1798512 3095031 BPSS1312 Burkholderia pseudomallei K96243 hypothetical protein YP_111322.1 1797052 D 272560 CDS YP_111323.1 53722338 3096066 1799023..1799664 1 NC_006351.1 Similar to Streptomyces coelicolor membrane protein sco3332 or sce68.30C SWALL:Q9WX02 (EMBL:AL939116) (238 aa) fasta scores: E(): 2e-06, 29.44% id in 180 aa; hypothetical protein 1799664 3096066 BPSS1313 Burkholderia pseudomallei K96243 hypothetical protein YP_111323.1 1799023 D 272560 CDS YP_111324.1 53722339 3096067 complement(1799718..1800068) 1 NC_006351.1 hypothetical protein 1800068 3096067 BPSS1314 Burkholderia pseudomallei K96243 hypothetical protein YP_111324.1 1799718 R 272560 CDS YP_111325.1 53722340 3094966 complement(1800598..1803501) 1 NC_006351.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1803501 ileS 3094966 ileS Burkholderia pseudomallei K96243 isoleucyl-tRNA synthetase YP_111325.1 1800598 R 272560 CDS YP_111326.1 53722341 3096476 complement(1803585..1804523) 1 NC_006351.1 Similar to Rhodobacter capsulatus hypothetical 32.2 kDa protein SWALL:O68125 (EMBL:AF010496) (296 aa) fasta scores: E(): 7e-35, 38.62% id in 290 aa, and to Sphingomonas aromaticivorans hypothetical 34.0 kDa protein orf114 SWALL:O85844 (EMBL:AF079317) (309 aa) fasta scores: E(): 8.5e-28, 33.44% id in 296 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4287 pa4287 SWALL:Q9HWB3 (EMBL:AE004845) (296 aa) fasta scores: E(): 2.9e-22, 33.1% id in 287 aa; hypothetical protein 1804523 3096476 BPSS1316 Burkholderia pseudomallei K96243 hypothetical protein YP_111326.1 1803585 R 272560 CDS YP_111327.1 53722342 3095157 complement(1804520..1805239) 1 NC_006351.1 Similar to Ralstonia solanacearum probable alanyl-tRNA synthetase related protein rsc0988 or rs04304 SWALL:Q8Y0Q5 (EMBL:AL646062) (245 aa) fasta scores: E(): 7.9e-18, 39.03% id in 228 aa, and to Bacillus anthracis alanyl-tRNA synthetase domain protein ba1720 SWALL:Q81SE0 (EMBL:AE017029) (236 aa) fasta scores: E(): 2.7e-16, 31.65% id in 218 aa. Similar to an internal region of Escherichia coli alanyl-tRNA synthetase AlaS or LovB SWALL:SYA_ECOLI (SWALL:P00957) (876 aa) fasta scores: E(): 4.5e-09, 29.87% id in 231 aa; alanyl-tRNA synthetase 1805239 3095157 BPSS1317 Burkholderia pseudomallei K96243 alanyl-tRNA synthetase YP_111327.1 1804520 R 272560 CDS YP_111328.1 53722343 3095158 complement(1805789..1807282) 1 NC_006351.1 Similar to Saccharomyces cerevisiae D-lactate dehydrogenase [cytochrome], mitochondrial precursor DlD1 or Dld or ydl174C SWALL:DLD1_YEAST (SWALL:P32891) (587 aa) fasta scores: E(): 1.6e-53, 37.01% id in 489 aa, and to Ralstonia solanacearum D-lactate dehydrogenase Dld or rsc2664 or rs04542 SWALL:Q8XW11 (EMBL:AL646071) (472 aa) fasta scores: E(): 1.1e-101, 58.98% id in 451 aa, and to Rhizobium loti probable D-lactate dehydrogenase mll1488 SWALL:Q98KG4 (EMBL:AP002997) (575 aa) fasta scores: E(): 2.4e-99, 56.4% id in 445 aa. Possible alternative translational start; D-lactate dehydrogenase 1807282 3095158 BPSS1318 Burkholderia pseudomallei K96243 D-lactate dehydrogenase YP_111328.1 1805789 R 272560 CDS YP_111329.1 53722344 3095299 complement(1807422..1807718) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein Msl7859 SWALL:Q984S8 (EMBL:AP003012) (97 aa) fasta scores: E(): 1.4e-08, 38.29% id in 94 aa, and to Ralstonia solanacearum hypothetical protein rsc1128 or rs04625 SWALL:Q8Y0B6 (EMBL:AL646062) (96 aa) fasta scores: E(): 2e-08, 35.48% id in 93 aa, and to Rhizobium meliloti hypothetical protein r00331 or smc00411 SWALL:Q92SN9 (EMBL:AL591783) (95 aa) fasta scores: E(): 1.5e-07, 40.21% id in 92 aa; hypothetical protein 1807718 3095299 BPSS1319 Burkholderia pseudomallei K96243 hypothetical protein YP_111329.1 1807422 R 272560 CDS YP_111330.1 53722345 3095931 complement(1807779..1808636) 1 NC_006351.1 hypothetical protein 1808636 3095931 BPSS1320 Burkholderia pseudomallei K96243 hypothetical protein YP_111330.1 1807779 R 272560 CDS YP_111331.1 53722346 3095932 complement(1808641..1809741) 1 NC_006351.1 C-terminus is similar to the N-terminus of Haemophilus influenzae hypothetical protein Hi0912 hi0912 SWALL:Y912_HAEIN (SWALL:P44074) (254 aa) fasta scores: E(): 4.1e-05, 30% id in 150 aa; hypothetical protein 1809741 3095932 BPSS1321 Burkholderia pseudomallei K96243 hypothetical protein YP_111331.1 1808641 R 272560 CDS YP_111332.1 53722347 3094941 1810477..1811349 1 NC_006351.1 Similar to Lactococcus lactis xylose regulatory protein XylR SWALL:Q9X421 (EMBL:AF092042) (319 aa) fasta scores: E(): 3.4e-05, 20.28% id in 281 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3269 SWALL:Q9HYX2 (EMBL:AE004749) (284 aa) fasta scores: E(): 7e-24, 33.81% id in 275 aa, and to Agrobacterium tumefaciens transcriptional regulator, AraC family atu1081 or agr_c_1998 SWALL:Q8UGF7 (EMBL:AE009072) (285 aa) fasta scores: E(): 3e-23, 33.08% id in 272 aa; AraC family transcriptional regulator 1811349 3094941 BPSS1322 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111332.1 1810477 D 272560 CDS YP_111333.1 53722348 3096632 complement(1811570..1812529) 1 NC_006351.1 hypothetical protein 1812529 3096632 BPSS1323 Burkholderia pseudomallei K96243 hypothetical protein YP_111333.1 1811570 R 272560 CDS YP_111334.1 53722349 3096633 complement(1812770..1813786) 1 NC_006351.1 catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 1813786 3096633 BPSS1324 Burkholderia pseudomallei K96243 1-aminocyclopropane-1-carboxylate deaminase YP_111334.1 1812770 R 272560 CDS YP_111335.1 53722350 3097167 1813979..1814488 1 NC_006351.1 Similar to Klebsiella pneumoniae leucine-responsive regulatory protein Lrp SWALL:LRP_KLEPN (SWALL:P37424) (163 aa) fasta scores: E(): 3.1e-24, 45.09% id in 153 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0645 or rs05577 SWALL:Q8XS36 (EMBL:AL646080) (186 aa) fasta scores: E(): 1.7e-48, 75.88% id in 170 aa, and to Rhizobium leguminosarum leucine-responsive regulatory-like protein SWALL:AAO17689 (EMBL:AY172673) (158 aa) fasta scores: E(): 4.9e-27, 50% id in 150 aa; transcription regulator AsnC 1814488 lrp 3097167 lrp Burkholderia pseudomallei K96243 transcription regulator AsnC YP_111335.1 1813979 D 272560 CDS YP_111336.1 53722351 3096550 1814887..1816338 1 NC_006351.1 Similar to Xanthomonas campestris hypothetical protein Xcc3767 SWALL:AAM43024 (EMBL:AE012497) (277 aa) fasta scores: E(): 1.6e-07, 29.6% id in 304 aa, and to Xanthomonas axonopodis hypothetical protein Xac3820 SWALL:AAM38662 (EMBL:AE012031) (268 aa) fasta scores: E(): 3.3e-07, 29.53% id in 298 aa; hypothetical protein 1816338 3096550 BPSS1326 Burkholderia pseudomallei K96243 hypothetical protein YP_111336.1 1814887 D 272560 CDS YP_111337.1 53722352 3096778 complement(1816540..1817895) 1 NC_006351.1 Similar to Burkholderia cepacia phthalate transporter OphD SWALL:Q9RPP3 (EMBL:AF152094) (448 aa) fasta scores: E(): 8.5e-47, 36.21% id in 428 aa, and to Caulobacter crescentus major facilitator family transporter cc2354 SWALL:Q9A5U3 (EMBL:AE005905) (430 aa) fasta scores: E(): 6.9e-79, 52.55% id in 430 aa, and to Agrobacterium tumefaciens MFS permease atu2708 or agr_c_4908 SWALL:Q8UBZ0 (EMBL:AE009217) (487 aa) fasta scores: E(): 3.4e-75, 49.05% id in 424 aa. Possible alternative translational start sites.; major facilitator superfamily sugar transporter protein 1817895 3096778 BPSS1327 Burkholderia pseudomallei K96243 major facilitator superfamily sugar transporter protein YP_111337.1 1816540 R 272560 CDS YP_111338.1 53722353 3096779 1818003..1818728 1 NC_006351.1 Similar to Streptomyces griseus GntR-family transcriptional regulator DasR SWALL:Q8VV01 (EMBL:AB061860) (253 aa) fasta scores: E(): 1.1e-14, 31.33% id in 233 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1506 or rs03035 SWALL:Q8XPY0 (EMBL:AL646085) (240 aa) fasta scores: E(): 4.6e-66, 70.04% id in 237 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc1997 or rs03565 SWALL:Q8XXW6 (EMBL:AL646067) (274 aa) fasta scores: E(): 3.3e-26, 35.34% id in 232 aa; GntR family transcriptional regulator 1818728 3096779 BPSS1328 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_111338.1 1818003 D 272560 CDS YP_111339.1 53722354 3096551 1818788..1820212 1 NC_006351.1 Similar to Rhodococcus sp. 19070 benzoate transport protein BopK SWALL:Q93Q76 (EMBL:AF279141) (448 aa) fasta scores: E(): 3.4e-17, 27.94% id in 433 aa, and to Ralstonia solanacearum probable metabolite transport transmembrane protein rsp0234 or rs05189 SWALL:Q8XT81 (EMBL:AL646077) (416 aa) fasta scores: E(): 2.8e-51, 70.79% id in 428 aa, and to Pseudomonas aeruginosa probable MFS transporter pa2114 SWALL:Q9I201 (EMBL:AE004638) (423 aa) fasta scores: E(): 2.4e-35, 48.59% id in 428 aa. Possible alternative translational start sites.; major facilitator transporter 1820212 3096551 BPSS1329 Burkholderia pseudomallei K96243 major facilitator transporter YP_111339.1 1818788 D 272560 CDS YP_111340.1 53722355 3097088 1820264..1821151 1 NC_006351.1 Similar to Sphingomonas sp. LB126 fluorene degradation FldB protein SWALL:Q9L399 (EMBL:AJ277295) (295 aa) fasta scores: E(): 1.7e-19, 31.75% id in 274 aa, and to Ralstonia solanacearum probable hydrolase transmembrane protein rsp0233 or rs05190 SWALL:Q8XT82 (EMBL:AL646077) (302 aa) fasta scores: E(): 5.6e-61, 60.72% id in 275 aa, and to Yersinia pestis orf45 ypo1933 or y2378 SWALL:Q9ZC43 (EMBL:AL031866) (289 aa) fasta scores: E(): 1.4e-26, 35.35% id in 280 aa; hypothetical protein 1821151 3097088 BPSS1330 Burkholderia pseudomallei K96243 hypothetical protein YP_111340.1 1820264 D 272560 CDS YP_111341.1 53722356 3097089 1821570..1823045 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc2492 or rs01104 SWALL:Q8XWI2 (EMBL:AL646070) (502 aa) fasta scores: E(): 6.5e-123, 66.4% id in 503 aa, and to Wolbachia sp. wri phosphoprotein phosphatase SWALL:Q9RBM2 (EMBL:AJ012073) (428 aa) fasta scores: E(): 9e-19, 28.91% id in 415 aa. Note: Also similar to BPSS0403 (479 aa) fasta scores: E(): 4.7e-135, 87.866% identity in 478 aa overlap; phosphatase 1823045 3097089 BPSS1331 Burkholderia pseudomallei K96243 phosphatase YP_111341.1 1821570 D 272560 CDS YP_111342.1 53722357 3095177 1823042..1824664 1 NC_006351.1 Similar to Paracoccus denitrificans methylamine utilization protein MauG precursor SWALL:MAUG_PARDE (SWALL:Q51658) (387 aa) fasta scores: E(): 9.1e-14, 36.74% id in 381 aa, and to Ralstonia solanacearum probable signal peptide protein rsc2493 or rs01103 SWALL:Q8XWI1 (EMBL:AL646070) (449 aa) fasta scores: E(): 6.4e-93, 67.86% id in 417 aa, and to Ralstonia solanacearum probable lipoprotein transmembrane rsp1173 or rs05063 SWALL:Q8XQP8 (EMBL:AL646083) (441 aa) fasta scores: E(): 4.5e-42, 39.9% id in 421 aa; cytochrome-c methylamine utilization protein 1824664 3095177 BPSS1332 Burkholderia pseudomallei K96243 cytochrome-c methylamine utilization protein YP_111342.1 1823042 D 272560 CDS YP_111343.1 53722358 3097199 1824843..1825703 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein Mlr0915 SWALL:Q98LR1 (EMBL:AP002996) (299 aa) fasta scores: E(): 8.2e-25, 37.85% id in 280 aa, and to Bacillus subtilis hypothetical protein YktD SWALL:Q45500 (EMBL:AF012285) (304 aa) fasta scores: E(): 2.1e-15, 29.61% id in 287 aa, and to Methanosarcina acetivorans hypothetical protein Ma2904 SWALL:Q8TLW9 (EMBL:AE010992) (313 aa) fasta scores: E(): 1.2e-13, 32.85% id in 207 aa; hypothetical protein 1825703 3097199 BPSS1333 Burkholderia pseudomallei K96243 hypothetical protein YP_111343.1 1824843 D 272560 CDS YP_111344.1 53722359 3097200 1826391..1826663 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp0427 or rs00886 SWALL:Q8XSP0 (EMBL:AL646078) (91 aa) fasta scores: E(): 7.9e-10, 44.94% id in 89 aa; hypothetical protein 1826663 3097200 BPSS1334 Burkholderia pseudomallei K96243 hypothetical protein YP_111344.1 1826391 D 272560 CDS YP_111345.1 53722360 3096197 1827019..1827231 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc0762 or rs05091 SWALL:Q8Y1C8 (EMBL:AL646060) (68 aa) fasta scores: E(): 2.5e-19, 86.27% id in 51 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0200 SWALL:Q9I6T8 (EMBL:AE004458) (70 aa) fasta scores: E(): 1.2e-17, 65.21% id in 69 aa; hypothetical protein 1827231 3096197 BPSS1335 Burkholderia pseudomallei K96243 hypothetical protein YP_111345.1 1827019 D 272560 CDS YP_111346.1 53722361 3095720 complement(1827569..1828078) 1 NC_006351.1 Similar to Ralstonia solanacearum probable acetyltransferase rsp0265 or rs03701 SWALL:Q8XT50 (EMBL:AL646077) (184 aa) fasta scores: E(): 4.3e-32, 58.68% id in 167 aa, and to C-terminus of Myxococcus xanthus acetyltransferase ActC SWALL:Q93P57 (EMBL:AF350253) (437 aa) fasta scores: E(): 4.8e-19, 42.77% id in 166 aa, and to entire protein of Deinococcus radiodurans hypothetical protein Dr2432 SWALL:Q9RRQ6 (EMBL:AE002073) (173 aa) fasta scores: E(): 1.6e-13, 39.21% id in 153 aa; acetyltransferase 1828078 3095720 BPSS1336 Burkholderia pseudomallei K96243 acetyltransferase YP_111346.1 1827569 R 272560 CDS YP_111347.1 53722362 3095721 complement(1828173..1828595) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0437 or rs03406 SWALL:Q8Y299 (EMBL:AL646059) (137 aa) fasta scores: E(): 6e-32, 70.14% id in 134 aa, and to uncultured proteobacterium conserved hypothetical protein ebac000-60d04.57 SWALL:AAM48689 (EMBL:AE008921) (141 aa) fasta scores: E(): 1.2e-22, 57.93% id in 126 aa; hypothetical protein 1828595 3095721 BPSS1337 Burkholderia pseudomallei K96243 hypothetical protein YP_111347.1 1828173 R 272560 CDS YP_111348.1 53722363 3096995 complement(1828597..1829031) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0438 or rs03407 SWALL:Q8Y298 (EMBL:AL646059) (144 aa) fasta scores: E(): 3.5e-32, 67.36% id in 144 aa, and to Vibrio cholerae hypothetical protein Vca0641 SWALL:Q9KLV0 (EMBL:AE004394) (139 aa) fasta scores: E(): 6.1e-17, 48.14% id in 135 aa, and to Rhizobium meliloti hypothetical protein ra0570 or sma1053 SWALL:Q92ZC0 (EMBL:AE007247) (136 aa) fasta scores: E(): 6.2e-16, 51.53% id in 130 aa; hypothetical protein 1829031 3096995 BPSS1338 Burkholderia pseudomallei K96243 hypothetical protein YP_111348.1 1828597 R 272560 CDS YP_111349.1 53722364 3095311 complement(1829021..1829368) 1 NC_006351.1 Similar to Rhizobium leguminosarum nodulation regulator NolR protein SWALL:O54057 (EMBL:AJ001934) (105 aa) fasta scores: E(): 4.5e-09, 40.86% id in 93 aa, and to Rhizobium loti transcriptional regulator mlr2159 SWALL:Q98J11 (EMBL:AP002999) (112 aa) fasta scores: E(): 6.8e-15, 52.63% id in 95 aa, and to Agrobacterium tumefaciens transcriptional regulator, ArsR family atu3466 or agr_l_2725 SWALL:Q8UAA8 (EMBL:AE009276) (117 aa) fasta scores: E(): 9.7e-15, 49.49% id in 99 aa; transcription regulator ArsR 1829368 3095311 BPSS1339 Burkholderia pseudomallei K96243 transcription regulator ArsR YP_111349.1 1829021 R 272560 CDS YP_111350.1 53722365 3095312 1829882..1830415 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri cytochrome b561 CybB or b1418 or sf1794 SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 1.3e-07, 26.59% id in 173 aa, and to Xanthomonas axonopodis cytochrome like b561 xac1686 SWALL:AAM36553 (EMBL:AE011801) (173 aa) fasta scores: E(): 2.8e-12, 34.54% id in 165 aa, and to Rhizobium loti cytochrome b561 mlr4647 SWALL:Q98DL7 (EMBL:AP003004) (179 aa) fasta scores: E(): 1.1e-11, 32.35% id in 170 aa; transmembrane cytochrome b561 1830415 3095312 BPSS1340 Burkholderia pseudomallei K96243 transmembrane cytochrome b561 YP_111350.1 1829882 D 272560 CDS YP_111351.1 53722366 3096157 complement(1830706..1832688) 1 NC_006351.1 Similar to Mycobacterium paratuberculosis probable cysteine desulfurase SWALL:CSD_MYCPA (SWALL:Q9KII6) (685 aa) fasta scores: E(): 1e-86, 53.23% id in 680 aa, and to Mycobacterium leprae probable cysteine desulfurase 1 Csd1 or ml0842 or mlcb22.44C SWALL:CSD1_MYCLE (SWALL:O32975) (611 aa) fasta scores: E(): 1.7e-81, 54.9% id in 632 aa. C-terminal region is similar to Erwinia chrysanthemi cysteine desulfurase SufS SWALL:Q9EXP2 (EMBL:AJ301654) (412 aa) fasta scores: E(): 4e-57, 52.64% id in 397 aa; cysteine desulfurase 1832688 3096157 BPSS1341 Burkholderia pseudomallei K96243 cysteine desulfurase YP_111351.1 1830706 R 272560 CDS YP_111352.1 53722367 3097085 complement(1832696..1833628) 1 NC_006351.1 Similar to Synechococcus sp. cysteine biosynthesis SrpI protein SWALL:SRPI_SYNP7 (SWALL:Q55032) (306 aa) fasta scores: E(): 1.3e-86, 73.59% id in 303 aa, and to Mycobacterium paratuberculosis 35 kDa protein SWALL:Q9RAJ4 (EMBL:AJ250887) (307 aa) fasta scores: E(): 9.6e-84, 69.38% id in 307 aa, and to Mycobacterium paratuberculosis major membrane protein-1 SWALL:Q9KII7 (EMBL:AF232751) (295 aa) fasta scores: E(): 3.6e-82, 70.84% id in 295 aa. Possible alternative start site at codon 29; hypothetical protein 1833628 3097085 BPSS1342 Burkholderia pseudomallei K96243 hypothetical protein YP_111352.1 1832696 R 272560 CDS YP_111353.1 53722368 3097086 complement(1833749..1834033) 1 NC_006351.1 Similar to Streptomyces griseus SgraiC control protein SWALL:Q9F6L1 (EMBL:AF290880) (79 aa) fasta scores: E(): 7.6e-05, 41.42% id in 70 aa, and to Rhizobium meliloti hypothetical transcription regulator protein smc02184 r00496 or smc02184 SWALL:Q92SB3 (EMBL:AL591783) (89 aa) fasta scores: E(): 2.8e-05, 44.04% id in 84 aa; DNA-binding protein 1834033 3097086 BPSS1343 Burkholderia pseudomallei K96243 DNA-binding protein YP_111353.1 1833749 R 272560 CDS YP_111354.1 53722369 3097027 complement(1834030..1835019) 1 NC_006351.1 Similar to Synechococcus sp. serine acetyltransferase, plasmid SrpH SWALL:SRPH_SYNP7 (SWALL:Q59967) (319 aa) fasta scores: E(): 3.4e-54, 58.05% id in 267 aa, and to Trypanosoma cruzi serine acetyltransferase Sat SWALL:Q9BKB1 (EMBL:AF296848) (348 aa) fasta scores: E(): 3.8e-28, 47.44% id in 196 aa, and to Entamoeba histolytica serine acetyltransferase EhsaT SWALL:Q9U8X2 (EMBL:AB023954) (305 aa) fasta scores: E(): 1.4e-25, 46.99% id in 183 aa; serine acetyltransferase 1835019 3097027 BPSS1344 Burkholderia pseudomallei K96243 serine acetyltransferase YP_111354.1 1834030 R 272560 CDS YP_111355.1 53722370 3095318 complement(1835134..1835601) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1257 or rs02773 SWALL:Q8XZY8 (EMBL:AL646063) (158 aa) fasta scores: E(): 6.1e-21, 49.36% id in 158 aa, and to Ralstonia solanacearum hypothetical protein rsc0296 rsc0296 or rs03263 SWALL:Q8Y2N9 (EMBL:AL646058) (130 aa) fasta scores: E(): 8.9e-17, 46.82% id in 126 aa, and to Mycobacterium tuberculosis hypothetical protein rv0390 or mtcy04d9.02 SWALL:P95198 (EMBL:Z84725) (140 aa) fasta scores: E(): 3e-12, 49.29% id in 142 aa; hypothetical protein 1835601 3095318 BPSS1345 Burkholderia pseudomallei K96243 hypothetical protein YP_111355.1 1835134 R 272560 CDS YP_111356.1 53722371 3095319 1835968..1838085 1 NC_006351.1 Similar to Novosphingobium capsulatum prolyl oligopeptidase SWALL:Q9ZNM8 (EMBL:AB010298) (723 aa) fasta scores: E(): 1.7e-36, 29.04% id in 699 aa, and to Caulobacter crescentus prolyl oligopeptidase cc3687 SWALL:Q9A279 (EMBL:AE006026) (723 aa) fasta scores: E(): 1.9e-81, 37.78% id in 704 aa, and to Rhizobium sp. probable peptidase Y4nA SWALL:Y4NA_RHISN (SWALL:P55577) (726 aa) fasta scores: E(): 3.6e-80, 38.08% id in 709 aa; peptidase 1838085 3095319 BPSS1346 Burkholderia pseudomallei K96243 peptidase YP_111356.1 1835968 D 272560 CDS YP_111357.1 53722372 3097138 complement(1838603..1839856) 1 NC_006351.1 Similar to Neisseria gonorrhoeae efflux pump protein FarA SWALL:Q9RQ30 (EMBL:AF132909) (394 aa) fasta scores: E(): 6.5e-48, 48.46% id in 359 aa, and to Ralstonia solanacearum probable multidrug resistance A EmrA or rsc1293 or rs02806 SWALL:Q8XZV2 (EMBL:AL646063) (428 aa) fasta scores: E(): 6e-57, 47.76% id in 402 aa, and to Xanthomonas campestris multidrug resistance efflux pump PmrA or xcc1399 SWALL:AAM40697 (EMBL:AE012239) (397 aa) fasta scores: E(): 1.1e-49, 44.22% id in 398 aa; HlyD family efflux pump protein 1839856 3097138 BPSS1347 Burkholderia pseudomallei K96243 HlyD family efflux pump protein YP_111357.1 1838603 R 272560 CDS YP_111358.1 53722373 3096813 complement(1840349..1841932) 1 NC_006351.1 Similar to Burkholderia cepacia Fusaric acid resistance protein precursor FusA SWALL:FUSA_BURCE (SWALL:P24126) (530 aa) fasta scores: E(): 9.3e-28, 31.74% id in 526 aa, and to Xanthomonas axonopodis outer membrane efflux protein YjcP or xac1444 SWALL:AAM36315 (EMBL:AE011776) (496 aa) fasta scores: E(): 7.2e-38, 38.41% id in 505 aa, and to Ralstonia solanacearum outer membrane chanel lipoprotein rsc1294 or rs02807 SWALL:Q8XZV1 (EMBL:AL646063) (489 aa) fasta scores: E(): 9.2e-38, 37.88% id in 483 aa; outer membrane efflux protein 1841932 3096813 BPSS1348 Burkholderia pseudomallei K96243 outer membrane efflux protein YP_111358.1 1840349 R 272560 CDS YP_111359.1 53722374 3096814 complement(1842237..1843232) 1 NC_006351.1 Similar to Shigella flexneri dTDP-rhamnosyl transferase RfbF or sf2099 SWALL:RFBF_SHIFL (SWALL:P37782) (296 aa) fasta scores: E(): 7.7e-16, 25% id in 312 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1130 SWALL:Q9I4K5 (EMBL:AE004543) (325 aa) fasta scores: E(): 5.3e-42, 45.19% id in 312 aa, and to Ralstonia solanacearum probable dTDP-rhamnosyl transferase RfbF or rsc0687 or rs01592 SWALL:Q8Y1K3 (EMBL:AL646060) (309 aa) fasta scores: E(): 2.1e-30, 40.51% id in 311 aa; dTDP-rhamnosyl transferase 1843232 3096814 BPSS1349 Burkholderia pseudomallei K96243 dTDP-rhamnosyl transferase YP_111359.1 1842237 R 272560 CDS YP_111360.1 53722375 3096889 complement(1843461..1845047) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O157:H7 multidrug resistance protein B EmrB or b2686 or z3987 or ecs3548 SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 7.5e-88, 45.34% id in 505 aa, and to Burkholderia pseudomallei hypothetical 55.5 kDa protein SWALL:Q9ZF72 (EMBL:AF110185) (520 aa) fasta scores: E(): 3.8e-114, 56.73% id in 527 aa, and to Burkholderia cepacia multidrug efflux protein BcrA SWALL:Q937U9 (EMBL:AJ347753) (518 aa) fasta scores: E(): 9e-103, 53.83% id in 522 aa; efflux/sugar transport/multidrug resistance protein 1845047 3096889 BPSS1350 Burkholderia pseudomallei K96243 efflux/sugar transport/multidrug resistance protein YP_111360.1 1843461 R 272560 CDS YP_111361.1 53722376 3097051 complement(1845044..1846363) 1 NC_006351.1 Similar to Pseudomonas aeruginosa rhamnosyltransferase chain B RhlB or pa3478 SWALL:Q9HYD1 (EMBL:AE004768) (426 aa) fasta scores: E(): 6.3e-48, 48% id in 427 aa, and to Candida albicans UDP-glucose:sterol glucosyltransferase ugt51c1 SWALL:Q9Y752 (EMBL:AF091398) (1516 aa) fasta scores: E(): 9.5e-09, 25.31% id in 403 aa; rhamnosyltransferase 1846363 3097051 BPSS1351 Burkholderia pseudomallei K96243 rhamnosyltransferase YP_111361.1 1845044 R 272560 CDS YP_111362.1 53722377 3097052 complement(1846596..1847495) 1 NC_006351.1 Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 subunit A RhlA or pa3479 SWALL:RHLA_PSEAE (SWALL:Q51559) (295 aa) fasta scores: E(): 2.7e-45, 48.49% id in 266 aa, and to Pseudomonas aeruginosa 3- hydroxyacyl-CoA-acyl carrier protein transferase PhaG or Qin or pa0730 SWALL:PHAG_PSEAE (SWALL:Q51553) (300 aa) fasta scores: E(): 2.4e-43, 43.11% id in 276 aa, and to Pseudomonas putida 3- hydroxyacyl-CoA-acyl carrier protein transferase PhaG SWALL:PHAG_PSEPU (SWALL:O85207) (295 aa) fasta scores: E(): 3.5e-42, 43.01% id in 272 aa; fatty acid biosynthetic protein 1847495 3097052 BPSS1352 Burkholderia pseudomallei K96243 fatty acid biosynthetic protein YP_111362.1 1846596 R 272560 CDS YP_111363.1 53722378 3096015 1848477..1849064 1 NC_006351.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 1849064 betI 3096015 betI Burkholderia pseudomallei K96243 transcriptional regulator BetI YP_111363.1 1848477 D 272560 CDS YP_111364.1 53722379 3096019 1849107..1850576 1 NC_006351.1 catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 1850576 betB 3096019 betB Burkholderia pseudomallei K96243 betaine aldehyde dehydrogenase YP_111364.1 1849107 D 272560 CDS YP_111365.1 53722380 3096018 1850596..1852293 1 NC_006351.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 1852293 betA 3096018 betA Burkholderia pseudomallei K96243 choline dehydrogenase YP_111365.1 1850596 D 272560 CDS YP_111366.1 53722381 3096459 1853417..1856794 1 NC_006351.1 hypothetical protein 1856794 3096459 BPSS1356 Burkholderia pseudomallei K96243 hypothetical protein YP_111366.1 1853417 D 272560 CDS YP_111367.1 53722382 3095250 1857019..1858455 1 NC_006351.1 Similar to Acinetobacter calcoaceticus 4-hydroxybenzoate transporter PcaK SWALL:PCAK_ACICA (SWALL:Q43975) (457 aa) fasta scores: E(): 2.2e-36, 30.24% id in 453 aa, and to Ralstonia solanacearum probable metabolite transport transmembrane protein rsp0052 or rs02027 SWALL:Q8XTQ4 (EMBL:AL646076) (476 aa) fasta scores: E(): 1e-145, 82.27% id in 474 aa, and to Pseudomonas aeruginosa probable MFS transporter pa3467 SWALL:Q9HYD9 (EMBL:AE004767) (455 aa) fasta scores: E(): 3.5e-124, 70.56% id in 462 aa; MFS sugar transporter 1858455 3095250 BPSS1357 Burkholderia pseudomallei K96243 MFS sugar transporter YP_111367.1 1857019 D 272560 CDS YP_111368.1 53722383 3095251 complement(1858536..1860014) 1 NC_006351.1 Similar to Erwinia chrysanthemi regulator HrpX SWALL:AAM46691 (EMBL:AF448202) (450 aa) fasta scores: E(): 8.4e-24, 28.46% id in 390 aa, and similar to the C-terminus of Pseudomonas aeruginosa probable two-component sensor pa0600 from codon 129 SWALL:Q9I5T8 (EMBL:AE004496) (797 aa) fasta scores: E(): 1.2e-36, 38.79% id in 366 aa, and to similar to the C-terminus of Ralstonia solanacearum probable transmembrane two component system sensor kinase transcription regulator protein rsc0191 or rs00623 from codon 254 SWALL:Q8Y2Z0 (EMBL:AL646057) (458 aa) fasta scores: E(): 7.7e-28, 44.87% id in 234 aa; sensor kinase 1860014 3095251 BPSS1358 Burkholderia pseudomallei K96243 sensor kinase YP_111368.1 1858536 R 272560 CDS YP_111369.1 53722384 3096351 complement(1860011..1860463) 1 NC_006351.1 Similar to Synechocystis sp. response regulator Rcp1 or slr0474 SWALL:RCP1_SYNY3 (SWALL:Q55169) (147 aa) fasta scores: E(): 9.3e-25, 48.98% id in 147 aa, and to Anabaena sp. two-component response regulator alr1967 SWALL:Q8YVK8 (EMBL:AP003587) (148 aa) fasta scores: E(): 3.6e-30, 57.24% id in 138 aa, and to Methanosarcina acetivorans response regulator receiver ma1268 SWALL:Q8TRB2 (EMBL:AE010795) (148 aa) fasta scores: E(): 2.8e-29, 58.39% id in 137 aa; response regulator protein 1860463 3096351 BPSS1359 Burkholderia pseudomallei K96243 response regulator protein YP_111369.1 1860011 R 272560 CDS YP_111370.1 53722385 3094977 complement(1860467..1862680) 1 NC_006351.1 C-terminus is similar to the C-terminal regions of Anabaena sp. cyanobacterial phytochrome A AphA or ALR3157 SWALL:PHYA_ANASP (SWALL:Q9LCC2) (765 aa) fasta scores: E(): 3.5e-45, 54.78% id in 261 aa, and to Methanosarcina acetivorans sensory transduction histidine kinase MA1270 SWALL:Q8TRB0 (EMBL:AE010795) (1456 aa) fasta scores: E(): 4.8e-62, 41.14% id in 508 aa; two-component sensor kinase 1862680 3094977 BPSS1360 Burkholderia pseudomallei K96243 two-component sensor kinase YP_111370.1 1860467 R 272560 CDS YP_111371.1 53722386 3094978 complement(1863240..1863725) 1 NC_006351.1 Similar to Vibrio cholerae hypothetical protein Vca0330 SWALL:Q9KMK9 (EMBL:AE004371) (162 aa) fasta scores: E(): 1.4e-32, 53.94% id in 152 aa, and to Xanthomonas campestris hypothetical protein Xcc2248 SWALL:AAM41527 (EMBL:AE012332) (156 aa) fasta scores: E(): 1.1e-13, 39.33% id in 150 aa, and to Agrobacterium tumefaciens hypothetical protein atu1003 or agr_c_1844 SWALL:Q8UGN3 (EMBL:AE009065) (176 aa) fasta scores: E(): 5.1e-13, 34.64% id in 153 aa; stress-induced protein 1863725 3094978 BPSS1361 Burkholderia pseudomallei K96243 stress-induced protein YP_111371.1 1863240 R 272560 CDS YP_111372.1 53722387 3097270 complement(1863764..1864696) 1 NC_006351.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 1864696 3097270 BPSS1362 Burkholderia pseudomallei K96243 2-hydroxyacid dehydrogenase YP_111372.1 1863764 R 272560 CDS YP_111373.1 53722388 3096007 1865456..1865911 1 NC_006351.1 Similar to Ralstonia solanacearum probable alanin-rich signal peptide protein rsp1518 or rs04795 SWALL:Q8XPW8 (EMBL:AL646085) (178 aa) fasta scores: E(): 2.5e-09, 47.61% id in 168 aa; hypothetical protein 1865911 3096007 BPSS1363 Burkholderia pseudomallei K96243 hypothetical protein YP_111373.1 1865456 D 272560 CDS YP_111374.1 53722389 3096537 complement(1866688..1866891) 1 NC_006351.1 Similar to Shewanella violacea cold shock-like protein CspG SWALL:Q9S170 (EMBL:AB022716) (70 aa) fasta scores: E(): 8.6e-17, 70.76% id in 65 aa, and to Ralstonia solanacearum probable cold shock-like transcription regulator protein CspD3 or rsp0002 or rs05790 SWALL:Q8XTV2 (EMBL:AL646076) (67 aa) fasta scores: E(): 4.6e-20, 78.78% id in 66 aa, and to Burkholderia multivorans cold-shock protein CspD SWALL:Q8RL32 (EMBL:AY089707) (68 aa) fasta scores: E(): 6e-19, 75.38% id in 65 aa; cold shock-like protein 1866891 cspD 3096537 cspD Burkholderia pseudomallei K96243 cold shock-like protein YP_111374.1 1866688 R 272560 CDS YP_111375.1 53722390 3095643 1867543..1867755 1 NC_006351.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1867755 rpsU 3095643 rpsU Burkholderia pseudomallei K96243 30S ribosomal protein S21 YP_111375.1 1867543 D 272560 CDS YP_111376.1 53722391 3095385 complement(1868394..1868855) 1 NC_006351.1 Similar to Ralstonia solanacearum dihydroneopterin aldolase FolB2 or rsc1105 or rs04050 SWALL:Q8Y0D9 (EMBL:AL646062) (148 aa) fasta scores: E(): 1.3e-37, 70.42% id in 142 aa, and to Ralstonia solanacearum probable dihydroneopterin aldolase FolB1 or rsp0050 or rs02025 SWALL:Q8XTQ6 (EMBL:AL646076) (148 aa) fasta scores: E(): 1e-36, 69.01% id in 142 aa; dihydroneopterin aldolase 1868855 folB 3095385 folB Burkholderia pseudomallei K96243 dihydroneopterin aldolase YP_111376.1 1868394 R 272560 CDS YP_111377.1 53722392 3095987 complement(1868855..1869490) 1 NC_006351.1 Similar to Corynebacterium sp. sarcosine oxidase gamma subunit SoxG SWALL:SOXG_CORS1 (SWALL:Q46338) (203 aa) fasta scores: E(): 1.6e-11, 32.98% id in 191 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxG2 or rsc1104 or rs04053 SWALL:Q8Y0E0 (EMBL:AL646062) (210 aa) fasta scores: E(): 2.8e-62, 75.71% id in 210 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxG1 or rsp0049 or rs02024 SWALL:Q8XTQ7 (EMBL:AL646076) (210 aa) fasta scores: E(): 2.8e-59, 73.81% id in 210 aa; sarcosine oxidase gamma subunit 1869490 soxG 3095987 soxG Burkholderia pseudomallei K96243 sarcosine oxidase gamma subunit YP_111377.1 1868855 R 272560 CDS YP_111378.1 53722393 3095685 complement(1869480..1872488) 1 NC_006351.1 Similar to Corynebacterium sp. sarcosine oxidase alpha subunit SoxA SWALL:SOXA_CORS1 (SWALL:Q46337) (967 aa) fasta scores: E(): 2.3e-145, 46.45% id in 1014 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxA2 or rsc1103 or rs04054 SWALL:Q8Y0E1 (EMBL:AL646062) (1003 aa) fasta scores: E(): 0, 86.14% id in 1003 aa, and to Pseudomonas aeruginosa sarcosine oxidase alpha subunit SoxA or pa5418 SWALL:Q9HTE6 (EMBL:AE004954) (1005 aa) fasta scores: E(): 1.3e-211, 57.46% id in 1011 aa; sarcosine oxidase alpha subunit 1872488 soxA 3095685 soxA Burkholderia pseudomallei K96243 sarcosine oxidase alpha subunit YP_111378.1 1869480 R 272560 CDS YP_111379.1 53722394 3095986 complement(1872485..1872775) 1 NC_006351.1 Similar to Corynebacterium sp. sarcosine oxidase delta subunit SoxD SWALL:SOXD_CORS1 (SWALL:Q46336) (98 aa) fasta scores: E(): 1.9e-19, 55.81% id in 86 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxD2 or rsc1102 or rs04055 SWALL:Q8Y0E2 (EMBL:AL646062) (98 aa) fasta scores: E(): 3.4e-31, 76.66% id in 90 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxD1 or rsp0047 or rs02022 SWALL:Q8XTQ9 (EMBL:AL646076) (107 aa) fasta scores: E(): 6.9e-30, 74.72% id in 91 aa; sarcosine oxidase delta subunit 1872775 soxD 3095986 soxD Burkholderia pseudomallei K96243 sarcosine oxidase delta subunit YP_111379.1 1872485 R 272560 CDS YP_111380.1 53722395 3096357 complement(1873103..1874347) 1 NC_006351.1 Similar to Corynebacterium sp. sarcosine oxidase beta subunit SoxB SWALL:SOXB_CORS1 (SWALL:P40875) (405 aa) fasta scores: E(): 1.1e-105, 65.91% id in 399 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxB1 or rsp0046 or rs06046 SWALL:Q8XTR0 (EMBL:AL646076) (414 aa) fasta scores: E(): 3.8e-157, 95.65% id in 414 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxB2 or rsc1101 or rs04056 SWALL:Q8Y0E3 (EMBL:AL646062) (414 aa) fasta scores: E(): 1.6e-156, 94.92% id in 414 aa; sarcosine oxidase beta subunit 1874347 soxB 3096357 soxB Burkholderia pseudomallei K96243 sarcosine oxidase beta subunit YP_111380.1 1873103 R 272560 CDS YP_111381.1 53722396 3095866 complement(1874364..1875749) 1 NC_006351.1 Similar to Escherichia coli L-serine dehydratase 2 SdaB or b2797 SWALL:SDHM_ECOLI (SWALL:P30744) (455 aa) fasta scores: E(): 1.3e-84, 50.86% id in 462 aa, and to Ralstonia solanacearum probable L-serine dehydratase SdaA1 or rsp0045 or rs02020 SWALL:Q8XTR1 (EMBL:AL646076) (461 aa) fasta scores: E(): 1.1e-162, 90.88% id in 461 aa, and to Ralstonia solanacearum probable L-serine dehydratase SdaA2 or rsc3296 or rs02527 SWALL:Q8XU97 (EMBL:AL646074) (458 aa) fasta scores: E(): 5.4e-121, 67.89% id in 461 aa; L-serine dehydratase 1875749 sdaB 3095866 sdaB Burkholderia pseudomallei K96243 L-serine dehydratase YP_111381.1 1874364 R 272560 CDS YP_111382.1 53722397 3096008 1876037..1877203 1 NC_006351.1 Similar to Streptomyces griseus transcriptional regulator AdpA SWALL:Q9S166 (EMBL:AB023785) (405 aa) fasta scores: E(): 3.6e-18, 30.97% id in 339 aa, and to Ralstonia solanacearum probable transcriptional regulatory DNA-binding transcription regulator protein rsc1098 or rs04066 SWALL:Q8Y0E6 (EMBL:AL646062) (360 aa) fasta scores: E(): 8.7e-115, 84.4% id in 359 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0044 or rs02019 SWALL:Q8XTR2 (EMBL:AL646076) (387 aa) fasta scores: E(): 1.2e-111, 82.81% id in 355 aa. CDS is extended in the C-terminus in comparison to some orthologues; AraC family transcriptional regulator 1877203 3096008 BPSS1371 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111382.1 1876037 D 272560 CDS YP_111383.1 53722398 3094985 complement(1877566..1877817) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa2487 pa2487 SWALL:Q9I0Z5 (EMBL:AE004676) (90 aa) fasta scores: E(): 8.9e-12, 50% id in 80 aa; hypothetical protein 1877817 3094985 BPSS1372 Burkholderia pseudomallei K96243 hypothetical protein YP_111383.1 1877566 R 272560 CDS YP_111384.1 53722399 3095493 complement(1878010..1878714) 1 NC_006351.1 Similar to Vibrio cholerae hypothetical protein Vca0740 SWALL:Q9KLK3 (EMBL:AE004403) (216 aa) fasta scores: E(): 1.8e-28, 48.34% id in 211 aa, and to Vibrio vulnificus uncharacterized protein conserved in bacteria vv20756 SWALL:AAO07687 (EMBL:AE016810) (220 aa) fasta scores: E(): 8.2e-27, 48.38% id in 217 aa, and to Rhizobium loti hypothetical protein Mll4256 SWALL:Q98EG3 (EMBL:AP003003) (209 aa) fasta scores: E(): 4.5e-26, 44.11% id in 204 aa; hypothetical protein 1878714 3095493 BPSS1373 Burkholderia pseudomallei K96243 hypothetical protein YP_111384.1 1878010 R 272560 CDS YP_111385.1 53722400 3095494 complement(1878950..1879678) 1 NC_006351.1 Similar to Ralstonia solanacearum probable glutathione S-transferase rsc3070 or rs00514 SWALL:Q8XUW3 (EMBL:AL646073) (238 aa) fasta scores: E(): 4.1e-53, 59.75% id in 241 aa, and to Rhizobium meliloti probable glutathione S-transferase Gst12 or rb1278 or smb21449 SWALL:Q92U61 (EMBL:AL603646) (240 aa) fasta scores: E(): 1.1e-49, 56.19% id in 242 aa, and to Xanthomonas axonopodis glutathione transferase xac3203 SWALL:AAM38047 (EMBL:AE011966) (241 aa) fasta scores: E(): 1.2e-48, 56.96% id in 244 aa; glutathione-S-transferase 1879678 3095494 BPSS1374 Burkholderia pseudomallei K96243 glutathione-S-transferase YP_111385.1 1878950 R 272560 CDS YP_111386.1 53722401 3096334 complement(1880830..1881387) 1 NC_006351.1 C-terminal region is similar to Pseudomonas aeruginosa hypothetical protein Pa2187 SWALL:Q9I1S8 (EMBL:AE004645) (141 aa) fasta scores: E(): 2.5e-18, 51.35% id in 111 aa, and Agrobacterium tumefaciens hypothetical protein atu3812 or agr_l_2041 SWALL:Q8U9B6 (EMBL:AE009312) (135 aa) fasta scores: E(): 8.2e-17, 45.65% id in 138 aa; hypothetical protein 1881387 3096334 BPSS1375 Burkholderia pseudomallei K96243 hypothetical protein YP_111386.1 1880830 R 272560 CDS YP_111387.1 53722402 3095459 complement(1882053..1883063) 1 NC_006351.1 Similar to Rhodobacter sphaeroides quinol oxidase subunit II QxtB SWALL:O86081 (EMBL:AF084032) (335 aa) fasta scores: E(): 9e-62, 48.94% id in 331 aa, and to Ralstonia solanacearum transmembrane cytochrome bd-II oxidase rsp1206 or rs03150 SWALL:Q8XQL6 (EMBL:AL646083) (336 aa) fasta scores: E(): 7.1e-94, 69.34% id in 336 aa, and to Pseudomonas aeruginosa cyanide insensitive terminal oxidase CioB or pa3929 SWALL:O07441 (EMBL:Y10528) (335 aa) fasta scores: E(): 1.7e-66, 51.04% id in 335 aa; quinol oxidase subunit 1883063 3095459 BPSS1376 Burkholderia pseudomallei K96243 quinol oxidase subunit YP_111387.1 1882053 R 272560 CDS YP_111388.1 53722403 3095460 complement(1883053..1884498) 1 NC_006351.1 Similar to Pseudomonas aeruginosa cyanide insensitive terminal oxidase CioA or pa3930 SWALL:O07440 (EMBL:Y10528) (488 aa) fasta scores: E(): 4.2e-82, 48.84% id in 475 aa, and to Ralstonia solanacearum transmembrane cytochrome bd-II oxidase rsp1207 or rs03151 SWALL:Q8XQL5 (EMBL:AL646083) (482 aa) fasta scores: E(): 3.3e-117, 65.31% id in 470 aa, and to Xanthomonas campestris cyanide insensitive terminal oxidase CioA or xcc3691 SWALL:AAM43463 (EMBL:AE012490) (471 aa) fasta scores: E(): 1e-82, 50.31% id in 471 aa; ubiquinol cytochrome c cyanide insensitive terminal oxidase 1884498 3095460 BPSS1377 Burkholderia pseudomallei K96243 ubiquinol cytochrome c cyanide insensitive terminal oxidase YP_111388.1 1883053 R 272560 CDS YP_111389.1 53722404 3095594 complement(1884733..1885158) 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical signal peptide protein smc00921 r00784 or smc00921 SWALL:Q92KL7 (EMBL:AL591784) (128 aa) fasta scores: E(): 1.1e-10, 45.52% id in 123 aa, and to Rhizobium loti hypothetical protein Mlr5326 SWALL:Q98C23 (EMBL:AP003006) (130 aa) fasta scores: E(): 1.1e-10, 44.44% id in 117 aa; hypothetical protein 1885158 3095594 BPSS1378 Burkholderia pseudomallei K96243 hypothetical protein YP_111389.1 1884733 R 272560 CDS YP_111390.1 53722405 3096202 1885379..1886074 1 NC_006351.1 Similar to Oceanobacillus iheyensis cation-transporting ATPase ob0089 SWALL:BAC12045 (EMBL:AP004593) (232 aa) fasta scores: E(): 1e-20, 46.02% id in 176 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YhiD or b3508 or z4920 or ecs4388 SWALL:YHID_ECOLI (SWALL:P26606) (215 aa) fasta scores: E(): 1.8e-21, 40.84% id in 213 aa, and to Escherichia coli O6 hypothetical protein YhiD or c4319 SWALL:AAN82755 (EMBL:AE016768) (215 aa) fasta scores: E(): 2.8e-21, 40.37% id in 213 aa; transmembrane transporter protein 1886074 3096202 BPSS1379 Burkholderia pseudomallei K96243 transmembrane transporter protein YP_111390.1 1885379 D 272560 CDS YP_111391.1 53722406 3096203 1886113..1886403 1 NC_006351.1 hypothetical protein 1886403 3096203 BPSS1380 Burkholderia pseudomallei K96243 hypothetical protein YP_111391.1 1886113 D 272560 CDS YP_111392.1 53722407 3095657 1886475..1888661 1 NC_006351.1 Similar to Rhizobium meliloti phospholipase rb0094 or smb20094 SWALL:Q92X68 (EMBL:AL603642) (590 aa) fasta scores: E(): 3.3e-51, 39.47% id in 461 aa, and to Caulobacter crescentus phospholipase D family protein cc0522 SWALL:Q9AAS4 (EMBL:AE005724) (505 aa) fasta scores: E(): 1.7e-42, 36.4% id in 478 aa, and to Caulobacter crescentus membrane protein, cc1538 SWALL:Q9A826 (EMBL:AE005828) (239 aa) fasta scores: E(): 3.3e-14, 33.19% id in 235 aa; transmembrane phospholipase 1888661 3095657 BPSS1381 Burkholderia pseudomallei K96243 transmembrane phospholipase YP_111392.1 1886475 D 272560 CDS YP_111393.1 53722408 3095789 1888658..1889674 1 NC_006351.1 Similar to Brucella melitensis dioxygenase BmeII0240 SWALL:Q8YDD7 (EMBL:AE009663) (285 aa) fasta scores: E(): 4.9e-14, 36.36% id in 231 aa, and to Rhizobium loti hypothetical protein Mlr2853 mlr2853 SWALL:Q98HI7 (EMBL:AP003000) (246 aa) fasta scores: E(): 2.2e-13, 36.54% id in 249 aa. C-terminus is extended in comparison to similar proteins; hypothetical protein 1889674 3095789 BPSS1382 Burkholderia pseudomallei K96243 hypothetical protein YP_111393.1 1888658 D 272560 CDS YP_111394.1 53722409 3095790 1889557..1890045 1 NC_006351.1 hypothetical protein 1890045 3095790 BPSS1383 Burkholderia pseudomallei K96243 hypothetical protein YP_111394.1 1889557 D 272560 CDS YP_111395.1 53722410 3096475 complement(1890320..1891054) 1 NC_006351.1 Weakly similar to Ralstonia solanacearum isomerase rotamase signal peptide protein rsc1744 or rs02932 SWALL:Q8XYL4 (EMBL:AL646066) (255 aa) fasta scores: E(): 1.3e-10, 28.44% id in 225 aa. C-terminus is similar to the C-terminal region of Nitrosomonas europaea PpiC-type peptidyl-prolyl cis-trans isomerase ne1418 SWALL:Q82UR3 (EMBL:BX321861) (264 aa) fasta scores: E(): 7.1e-10, 30.04% id in 213 aa; rotamase 1891054 3096475 BPSS1383a Burkholderia pseudomallei K96243 rotamase YP_111395.1 1890320 R 272560 CDS YP_111396.1 53722411 3095181 complement(1891215..1892744) 1 NC_006351.1 hypothetical protein 1892744 3095181 BPSS1384 Burkholderia pseudomallei K96243 hypothetical protein YP_111396.1 1891215 R 272560 CDS YP_111397.1 53722412 3096526 complement(1893842..1894828) 1 NC_006351.1 ATP/GTP binding protein 1894828 3096526 BPSS1385 Burkholderia pseudomallei K96243 ATP/GTP binding protein YP_111397.1 1893842 R 272560 CDS YP_111398.1 53722413 3097104 complement(1895431..1899264) 1 NC_006351.1 Poor database matches. Almost identical to the previously sequence Burkholderia pseudomallei hypothetical protein SWALL:Q93L05 (EMBL:AF074878) (1287 aa) fasta scores: E(): 0, 98.21% id in 1287 aa; ATP/GTP binding protein 1899264 3097104 BPSS1386 Burkholderia pseudomallei K96243 ATP/GTP binding protein YP_111398.1 1895431 R 272560 CDS YP_111399.1 53722414 3095274 complement(1899336..1899821) 1 NC_006351.1 Previously sequenced as Burkholderia pseudomallei hypothetical 17.9 kDa protein SWALL:Q93L04 (EMBL:AF074878) (161 aa) fasta scores: E(): 5e-66, 100% id in 161 aa. Similar to Sinorhizobium meliloti phage PBC5 hypothetical 17.1 kDa protein orf18 SWALL:Q8W6K9 (EMBL:AF448724) (150 aa) fasta scores: E(): 4.7e-13, 35.46% id in 141 aa; hypothetical protein 1899821 3095274 BPSS1387 Burkholderia pseudomallei K96243 hypothetical protein YP_111399.1 1899336 R 272560 CDS YP_111400.1 53722415 3094971 complement(1899846..1901654) 1 NC_006351.1 Similar to Burkholderia pseudomallei hypothetical 61.4 kDa protein SWALL:Q93L03 (EMBL:AF074878) (602 aa) fasta scores: E(): 7.5e-177, 99.5% id in 602 aa, and to C-terminus of Pseudomonas syringae HrpK SWALL:Q9L6W3 (EMBL:AF232004) (780 aa) fasta scores: E(): 2.8e-21, 30.3% id in 660 aa, and to C-terminus of Pseudomonas syringae HrpK SWALL:Q9L6V5 (EMBL:AF232005) (767 aa) fasta scores: E(): 6.6e-21, 29.83% id in 620 aa; hypothetical protein 1901654 3094971 BPSS1388 Burkholderia pseudomallei K96243 hypothetical protein YP_111400.1 1899846 R 272560 CDS YP_111401.1 53722416 3094972 complement(1901932..1903338) 1 NC_006351.1 hypothetical protein 1903338 3094972 BPSS1389 Burkholderia pseudomallei K96243 hypothetical protein YP_111401.1 1901932 R 272560 CDS YP_111402.1 53722417 3095732 complement(1903732..1905498) 1 NC_006351.1 Almost identical to the previously sequenced Burkholderia pseudomallei typeIII secretion-system associated protein SctC SWALL:Q93L02 (EMBL:AF074878) (588 aa) fasta scores: E(): 7.7e-207, 99.49% id in 588 aa. Similar to Ralstonia solanacearum hypersensitivity response secretion protein HrpA precursor HrpA or HrcC or rsp0874 or rs01645 SWALL:HRPA_RALSO (SWALL:Q52498) (568 aa) fasta scores: E(): 1.3e-84, 45.58% id in 577 aa, and to Burkholderia cepacia genomovar III BcsCC SWALL:Q8VP21 (EMBL:AY028431) (681 aa) fasta scores: E(): 2.9e-39, 37.1% id in 601 aa; type III secretion system protein 1905498 sctC 3095732 sctC Burkholderia pseudomallei K96243 type III secretion system protein YP_111402.1 1903732 R 272560 CDS YP_111403.1 53722418 3096424 complement(1905540..1906991) 1 NC_006351.1 Similar to Ralstonia solanacearum regulatory protein HrpB or rsp0873 or rs01644 SWALL:HRPB_RALSO (SWALL:P31778) (477 aa) fasta scores: E(): 5.6e-49, 34.35% id in 492 aa. Almost identical to the previously sequenced Burkholderia pseudomallei hypothetical 54.7 kDa protein SWALL:Q93L01 (EMBL:AF074878) (483 aa) fasta scores: E(): 4.9e-195, 99.58% id in 483 aa; AraC family transcriptional regulator 1906991 3096424 BPSS1391 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111403.1 1905540 R 272560 CDS YP_111404.1 53722419 3095564 complement(1907166..1907984) 1 NC_006351.1 Similar to Xanthomonas campestris type III secretion associated protein Hrpb8 SWALL:Q56786 (EMBL:U33548) (276 aa) fasta scores: E(): 7.1e-46, 44.64% id in 271 aa. Identical to Burkholderia pseudomallei type III secretion-associated protein SctT SWALL:Q93L00 (EMBL:AF074878) (240 aa) fasta scores: E(): 6.7e-93, 100% id in 240 aa. Similar to Xanthomonas campestris HrpB8 protein HrcT or xcc1238 SWALL:AAM40536 (EMBL:AE012222) (276 aa) fasta scores: E(): 1.6e-46, 44.98% id in 269 aa; type III secretion-associated protein 1907984 sctT 3095564 sctT Burkholderia pseudomallei K96243 type III secretion-associated protein YP_111404.1 1907166 R 272560 CDS YP_111405.1 53722420 3095840 complement(1907981..1908487) 1 NC_006351.1 Previously sequenced as Burkholderia pseudomallei ORF7 SWALL:Q93KZ9 (EMBL:AF074878) (168 aa) fasta scores: E(): 3.1e-52, 100% id in 168 aa; hypothetical protein 1908487 3095840 BPSS1393 Burkholderia pseudomallei K96243 hypothetical protein YP_111405.1 1907981 R 272560 CDS YP_111406.1 53722421 3095780 complement(1908508..1909857) 1 NC_006351.1 Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion associated protein SctN SWALL:Q93KZ8 (EMBL:AF074878) (449 aa) fasta scores: E(): 8.6e-155, 99.77% id in 449 aa. Similar to Xanthomonas axonopodis HrcN protein or xac0412 SWALL:Q8PQB6 (EMBL:AE011666) (442 aa) fasta scores: E(): 1.2e-107, 70.48% id in 437 aa, and to Xanthomonas campestris probable ATP synthase HrpB6 SWALL:HRB6_XANCV (SWALL:P80153) (442 aa) fasta scores: E(): 3.6e-107, 70.48% id in 437 aa; type III secretion system ATPase 1909857 sctN 3095780 sctN Burkholderia pseudomallei K96243 type III secretion system ATPase YP_111406.1 1908508 R 272560 CDS YP_111407.1 53722422 3095905 complement(1909854..1910723) 1 NC_006351.1 Previously sequenced as Burkholderia pseudomallei type III secretion-associated protein SctL SWALL:Q93KZ7 (EMBL:AF074878) (289 aa) fasta scores: E(): 2.4e-103, 100% id in 289 aa. Similar to Ralstonia solanacearum protein HrpF or rsp0869 or rs01640 SWALL:Q8XRH8 (EMBL:AL646081) (301 aa) fasta scores: E(): 1.8e-15, 31.25% id in 288 aa, and to Xanthomonas axonopodis protein HrpB5 or xac0411 SWALL:AAM35302 (EMBL:AE011666) (233 aa) fasta scores: E(): 4.9e-15, 31.17% id in 247 aa; type III secretion system protein HrpB 1910723 sctL 3095905 sctL Burkholderia pseudomallei K96243 type III secretion system protein HrpB YP_111407.1 1909854 R 272560 CDS YP_111408.1 53722423 3095841 complement(1910708..1911475) 1 NC_006351.1 Almost identical to the previously sequenced Burkholderia pseudomallei hypothetical 27.8 kDa protein SWALL:Q93KZ6 (EMBL:AF074878) (255 aa) fasta scores: E(): 7.5e-105, 99.6% id in 255 aa; hypothetical protein 1911475 3095841 BPSS1396 Burkholderia pseudomallei K96243 hypothetical protein YP_111408.1 1910708 R 272560 CDS YP_111409.1 53722424 3095904 complement(1911490..1912314) 1 NC_006351.1 Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion associated protein SctJ SWALL:Q93KZ5 (EMBL:AF074878) (274 aa) fasta scores: E(): 1e-101, 99.27% id in 274 aa. Similar to Xanthomonas campestris HrcJ protein or xcc1233 SWALL:AAM40531 (EMBL:AE012222) (254 aa) fasta scores: E(): 1.2e-44, 53.01% id in 249 aa, and to Ralstonia solanacearum Hrp conserved lipoprotein HrcJ transmembrane or rsp0867 or rs01638 SWALL:Q52492 (EMBL:AJ245811) (269 aa) fasta scores: E(): 3.1e-44, 52.29% id in 262 aa; type III secretion associated protein 1912314 sctJ 3095904 sctJ Burkholderia pseudomallei K96243 type III secretion associated protein YP_111409.1 1911490 R 272560 CDS YP_111410.1 53722425 3096618 complement(1912352..1912738) 1 NC_006351.1 Previously sequenced as Burkholderia pseudomallei hypothetical 13.9 kDa protein SWALL:Q93KZ4 (EMBL:AF074878) (128 aa) fasta scores: E(): 1.4e-41, 100% id in 128 aa; hypothetical protein 1912738 3096618 BPSS1398 Burkholderia pseudomallei K96243 hypothetical protein YP_111410.1 1912352 R 272560 CDS YP_111411.1 53722426 3094997 complement(1912775..1913344) 1 NC_006351.1 Highly similar to the previously sequenced Burkholderia pseudomallei hypothetical 19.6 kDa protein SWALL:Q93KZ3 (EMBL:AF074878) (178 aa) fasta scores: E(): 2.4e-70, 98.87% id in 178 aa. N-terminus is similar to the N-terminal region of Ralstonia solanacearum HRPK protein rsp0865 or rs01636 SWALL:Q52490 (EMBL:AJ245811) (158 aa) fasta scores: E(): 2.2e-06, 29.36% id in 126 aa; hypothetical protein 1913344 3094997 BPSS1399 Burkholderia pseudomallei K96243 hypothetical protein YP_111411.1 1912775 R 272560 CDS YP_111412.1 53722427 3095565 1913631..1914689 1 NC_006351.1 Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctU SWALL:Q93KZ2 (EMBL:AF074878) (351 aa) fasta scores: E(): 5.4e-132, 99.14% id in 352 aa. Similar to Ralstonia solanacearum hypersensitivity response secretion protein HrcU or HrpN or rsp0864 or rs01635 SWALL:HRCU_RALSO (SWALL:P35652) (357 aa) fasta scores: E(): 2.8e-60, 50% id in 346 aa, and to Xanthomonas campestris HrcU homolog SWALL:Q9RBK8 (EMBL:AF160974) (357 aa) fasta scores: E(): 3e-57, 45.79% id in 345 aa; type III secretion system protein HrcU 1914689 sctU 3095565 sctU Burkholderia pseudomallei K96243 type III secretion system protein HrcU YP_111412.1 1913631 D 272560 CDS YP_111413.1 53722428 3095735 1914705..1916822 1 NC_006351.1 Almost identical to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctV SWALL:Q93KZ1 (EMBL:AF074878) (705 aa) fasta scores: E(): 0, 99.71% id in 705 aa. Similar to Pseudomonas glumae HrpO SWALL:Q9F1J5 (EMBL:AB053455) (698 aa) fasta scores: E(): 7.7e-193, 77.69% id in 704 aa; type III secretion-associated protein 1916822 sctV 3095735 sctV Burkholderia pseudomallei K96243 type III secretion-associated protein YP_111413.1 1914705 D 272560 CDS YP_111414.1 53722429 3094998 1916819..1917505 1 NC_006351.1 Highly similar to the previously sequenced Burkholderia pseudomallei hypothetical 24.8 kDa protein SWALL:Q9ZGR2 (EMBL:AF074878) (227 aa) fasta scores: E(): 1.4e-73, 96.91% id in 227 aa; hypothetical protein 1917505 3094998 BPSS1402 Burkholderia pseudomallei K96243 hypothetical protein YP_111414.1 1916819 D 272560 CDS YP_111415.1 53722430 3097268 1917874..1918806 1 NC_006351.1 Similar to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctQ SWALL:Q9ZGR1 (EMBL:AF074878) (310 aa) fasta scores: E(): 4.2e-117, 98.06% id in 310 aa. Similar to Zea mays fdr3 SWALL:Q94KV5 (EMBL:AF262623) (355 aa) fasta scores: E(): 1.1e-16, 33.33% id in 315 aa, and to Ralstonia solanacearum protein HrpQ or HrcQ or rsp0861 or rs01632 SWALL:Q52489 (EMBL:AJ245811) (354 aa) fasta scores: E(): 1.8e-12, 29.09% id in 299 aa; type III secretion-associated protein 1918806 sctQ 3097268 sctQ Burkholderia pseudomallei K96243 type III secretion-associated protein YP_111415.1 1917874 D 272560 CDS YP_111416.1 53722431 3097269 1918790..1919440 1 NC_006351.1 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 1919440 sctR 3097269 sctR Burkholderia pseudomallei K96243 type III secretion system protein YP_111416.1 1918790 D 272560 CDS YP_111417.1 53722432 3095656 1919463..1919726 1 NC_006351.1 Highly similar to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctS SWALL:Q9ZGR0 (EMBL:AF074878) (87 aa) fasta scores: E(): 3.7e-31, 98.85% id in 87 aa. Similar to Ralstonia solanacearum HrpU protein or HrcS or rsp0859 or rs01630 SWALL:Q52487 (EMBL:AJ245811) (86 aa) fasta scores: E(): 3.4e-14, 58.53% id in 82 aa, and to Xanthomonas oryzae pv. oryzicola HrcS SWALL:Q93MH8 (EMBL:AF404819) (86 aa) fasta scores: E(): 2e-13, 52.32% id in 86 aa; type III secretion-associated protein 1919726 sctS 3095656 sctS Burkholderia pseudomallei K96243 type III secretion-associated protein YP_111417.1 1919463 D 272560 CDS YP_111418.1 53722433 3095527 1919731..1920690 1 NC_006351.1 Similar to the previously sequenced Burkholderia pseudomallei hypothetical 34.4 kDa protein SWALL:Q9ZGQ9 (EMBL:AF074878) (317 aa) fasta scores: E(): 6.1e-118, 97.8% id in 319 aa; hypothetical protein 1920690 3095527 BPSS1406 Burkholderia pseudomallei K96243 hypothetical protein YP_111418.1 1919731 D 272560 CDS YP_111419.1 53722434 3095934 1920833..1921882 1 NC_006351.1 Highly similar to the previously sequenced Burkholderia pseudomallei type III secretion-associated protein SctD SWALL:Q93KZ0 (EMBL:AF074878) (349 aa) fasta scores: E(): 1.7e-119, 98.28% id in 349 aa. Similar to Xanthomonas campestris HrpD5 protein or xcc1223 SWALL:Q8PBA0 (EMBL:AE012221) (315 aa) fasta scores: E(): 1e-09, 30.09% id in 329 aa; secretion-associated protein 1921882 sctD 3095934 sctD Burkholderia pseudomallei K96243 secretion-associated protein YP_111419.1 1920833 D 272560 CDS YP_111420.1 53722435 3095113 1921937..1922185 1 NC_006351.1 Previously sequenced as Burkholderia pseudomallei hypothetical 8.8 kDa protein SWALL:Q93KY9 (EMBL:AF074878) (82 aa) fasta scores: E(): 7.3e-30, 100% id in 82 aa; hypothetical protein 1922185 3095113 BPSS1408 Burkholderia pseudomallei K96243 hypothetical protein YP_111420.1 1921937 D 272560 CDS YP_111421.1 53722436 3095114 1922315..1922602 1 NC_006351.1 hypothetical protein 1922602 3095114 BPSS1409 Burkholderia pseudomallei K96243 hypothetical protein YP_111421.1 1922315 D 272560 CDS YP_111422.1 53722437 3095928 1922715..1923170 1 NC_006351.1 Similar to Xanthomonas oryzae HpaB SWALL:Q9KW23 (EMBL:AB045311) (162 aa) fasta scores: E(): 7e-30, 52.86% id in 157 aa. Almost identical to the previously sequenced Burkholderia pseudomallei hypothetical 16.8 kDa protein SWALL:Q93KY8 (EMBL:AF074878) (151 aa) fasta scores: E(): 1.1e-61, 99.33% id in 151 aa; hypothetical protein 1923170 3095928 BPSS1410 Burkholderia pseudomallei K96243 hypothetical protein YP_111422.1 1922715 D 272560 CDS YP_111423.1 53722438 3096408 1923507..1924622 1 NC_006351.1 Previously sequenced as Burkholderia pseudomallei hypothetical 23.1 kDa protein SWALL:Q93KY7 (EMBL:AF074878) (218 aa) fasta scores: E(): 8e-79, 100% id in 218 aa. Weakly similar to Serratia entomophila SepC protein SWALL:Q9F9Z0 (EMBL:AF135182) (973 aa) fasta scores: E(): 5.3e-07, 29.94% id in 334 aa, and to Yersinia pestis insecticial toxin ypo2380 SWALL:Q8ZE10 (EMBL:AJ414152) (984 aa) fasta scores: E(): 7.7e-05, 31.45% id in 302 aa; hypothetical protein 1924622 3096408 BPSS1411 Burkholderia pseudomallei K96243 hypothetical protein YP_111423.1 1923507 D 272560 CDS YP_111424.1 53722439 3096409 complement(1925049..1925531) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc2672 or rs04533 SWALL:Q8XW03 (EMBL:AL646071) (159 aa) fasta scores: E(): 2.7e-13, 36.91% id in 149 aa, and to Rhizobium meliloti auxin-binding protein r01214 or smc01776 SWALL:Q92QU1 (EMBL:AL591786) (167 aa) fasta scores: E(): 1.7e-06, 36.36% id in 99 aa; hypothetical protein 1925531 3096409 BPSS1412 Burkholderia pseudomallei K96243 hypothetical protein YP_111424.1 1925049 R 272560 CDS YP_111425.1 53722440 3094909 complement(1925626..1926240) 1 NC_006351.1 Similar to Bradyrhizobium japonicum Bll1358 protein SWALL:BAC46623 (EMBL:AP005939) (271 aa) fasta scores: E(): 5.4e-28, 44.33% id in 203 aa, and to Xanthomonas axonopodis hydrolase xac3428 SWALL:Q8PH32 (EMBL:AE011989) (205 aa) fasta scores: E(): 4.7e-16, 36.31% id in 201 aa; hydrolase 1926240 3094909 BPSS1413 Burkholderia pseudomallei K96243 hydrolase YP_111425.1 1925626 R 272560 CDS YP_111426.1 53722441 3096292 1926431..1927135 1 NC_006351.1 Similar to Rhodobacter capsulatus pyruvate dehydrogenase complex repressor PdhR SWALL:O33960 (EMBL:U78309) (257 aa) fasta scores: E(): 1.5e-12, 32.6% id in 230 aa, and to Rhizobium meliloti GntR-family transcriptional regulator ra0130 or sma0246 SWALL:Q930R5 (EMBL:AE007207) (233 aa) fasta scores: E(): 8.2e-21, 37% id in 227 aa, and to Agrobacterium tumefaciens transcriptional regulator, GntR family atu2740 or agr_c_4967 SWALL:Q8UBW0 (EMBL:AE009221) (238 aa) fasta scores: E(): 1.7e-20, 36.74% id in 215 aa; GntR family transcriptional regulator 1927135 3096292 BPSS1414 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_111426.1 1926431 D 272560 CDS YP_111427.1 53722442 3096293 1927214..1928104 1 NC_006351.1 Similar to Salmonella typhimurium 3-hydroxyisobutyrate dehydrogenase YgbJ or stm2918 SWALL:Q8ZMG4 (EMBL:AE008833) (307 aa) fasta scores: E(): 2.5e-52, 58.07% id in 291 aa, and to Pasteurella multocida hypothetical protein Pm1366 SWALL:Q9CL76 (EMBL:AE006174) (301 aa) fasta scores: E(): 9.3e-52, 55.66% id in 300 aa, and to Brucella melitensis D-beta-hydroxybutyrate dehydrogenase bmeII1090 SWALL:Q8YB11 (EMBL:AE009741) (302 aa) fasta scores: E(): 2.4e-49, 55.4% id in 296 aa; dehydrogenase/oxidoreductase 1928104 3096293 BPSS1415 Burkholderia pseudomallei K96243 dehydrogenase/oxidoreductase YP_111427.1 1927214 D 272560 CDS YP_111428.1 53722443 3096152 1928115..1929518 1 NC_006351.1 Similar to Pasteurella multocida hypothetical protein Pm1365 SWALL:Q9CL77 (EMBL:AE006174) (413 aa) fasta scores: E(): 4.4e-60, 48.96% id in 388 aa, and to Brucella melitensis hypothetical protein BmeII1091 SWALL:Q8YB10 (EMBL:AE009741) (436 aa) fasta scores: E(): 6.8e-60, 45.16% id in 465 aa, and to Rhizobium meliloti hypothetical protein rb1377 or smb20670 SWALL:Q92TW7 (EMBL:AL603646) (425 aa) fasta scores: E(): 8.9e-59, 48.34% id in 453 aa; hypothetical protein 1929518 3096152 BPSS1416 Burkholderia pseudomallei K96243 hypothetical protein YP_111428.1 1928115 D 272560 CDS YP_111429.1 53722444 3096558 1929515..1930156 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri L-fuculose phosphate aldolase FucA or FucC or prd or b2800 or sf2814 SWALL:FUCA_ECOLI (SWALL:P11550) (215 aa) fasta scores: E(): 3.6e-07, 28.35% id in 201 aa, and to Rhizobium meliloti aldolase, possibly L-fuculose-phosphate aldolase rb1373 or smb20666 SWALL:Q92TX1 (EMBL:AL603646) (225 aa) fasta scores: E(): 1.7e-34, 51.2% id in 207 aa, and to Brucella melitensis L-fuculose phosphate aldolase bmeII1095 SWALL:Q8YB06 (EMBL:AE009741) (224 aa) fasta scores: E(): 2.4e-29, 44.97% id in 209 aa; aldolase 1930156 3096558 BPSS1417 Burkholderia pseudomallei K96243 aldolase YP_111429.1 1929515 D 272560 CDS YP_111430.1 53722445 3096559 1930260..1931582 1 NC_006351.1 Similar to Burkholderia cepacia phthalate transporter OphD SWALL:Q9RPP3 (EMBL:AF152094) (448 aa) fasta scores: E(): 3.2e-70, 42.61% id in 420 aa, and to Brucella melitensis tartrate transporter bmeii1096 SWALL:Q8YB05 (EMBL:AE009741) (451 aa) fasta scores: E(): 2e-112, 64.52% id in 420 aa, and to Ralstonia solanacearum probable permease transmembrane protein rsc2352 or rs01194 SWALL:Q8XWW8 (EMBL:AL646069) (442 aa) fasta scores: E(): 2.5e-106, 59.59% id in 443 aa; transmembrane permease transporter 1931582 3096559 BPSS1418 Burkholderia pseudomallei K96243 transmembrane permease transporter YP_111430.1 1930260 D 272560 CDS YP_111431.1 53722446 3094965 1931664..1932440 1 NC_006351.1 Similar to Escherichia coli hydroxypyruvate isomerase Hyi or Gip or b0508 SWALL:HYI_ECOLI (SWALL:P30147) (258 aa) fasta scores: E(): 3.6e-43, 43.96% id in 257 aa, and to Alcaligenes eutrophus hypothetical 28.3 kDa protein in Gbd 5'region SWALL:YGB4_ALCEU (SWALL:Q44015) (260 aa) fasta scores: E(): 4.8e-86, 79.45% id in 258 aa, and to Ralstonia solanacearum hypothetical protein rsc0020 or rs01842 SWALL:Q8Y3G0 (EMBL:AL646057) (262 aa) fasta scores: E(): 1.1e-77, 71.26% id in 254 aa; hydroxypyruvate isomerase 1932440 hyi 3094965 hyi Burkholderia pseudomallei K96243 hydroxypyruvate isomerase YP_111431.1 1931664 D 272560 CDS YP_111432.1 53722447 3095138 1932468..1933439 1 NC_006351.1 Similar to Alcaligenes eutrophus hypothetical 34.2 kDa protein in Gbd 5'region SWALL:Q44016 (EMBL:L36817) (324 aa) fasta scores: E(): 3.4e-76, 66.87% id in 320 aa, and to Yersinia pestis hypothetical protein ypo2238 or y2079 SWALL:Q8ZED6 (EMBL:AJ414151) (333 aa) fasta scores: E(): 9.1e-63, 55.03% id in 318 aa, and to Brucella melitensis 4-hydroxybutyrate dehydrogenase bmeII1094 SWALL:Q8YB07 (EMBL:AE009741) (321 aa) fasta scores: E(): 7.6e-59, 52.18% id in 320 aa; hypothetical protein 1933439 3095138 BPSS1420 Burkholderia pseudomallei K96243 hypothetical protein YP_111432.1 1932468 D 272560 CDS YP_111433.1 53722448 3095591 1934223..1935014 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein Mll1937 from codon 35 SWALL:Q98JH6 (EMBL:AP002998) (228 aa) fasta scores: E(): 9.7e-45, 50.66% id in 225 aa. Possible alternative start site at codon 34; hypothetical protein 1935014 3095591 BPSS1421 Burkholderia pseudomallei K96243 hypothetical protein YP_111433.1 1934223 D 272560 CDS YP_111434.1 53722449 3095592 complement(1935909..1936808) 1 NC_006351.1 Similar to Ralstonia solanacearum aspartyl/asparaginyl beta-hydroxylase transmembrane protein rsc1877 or rs03437 SWALL:Q8XY86 (EMBL:AL646067) (300 aa) fasta scores: E(): 2.4e-77, 58.38% id in 298 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4512 SWALL:Q9HVQ9 (EMBL:AE004865) (299 aa) fasta scores: E(): 4.9e-75, 60.06% id in 298 aa, and to Xanthomonas campestris aspartyl/asparaginyl beta-hydroxylase AspH or xcc0382 SWALL:AAM39701 (EMBL:AE012134) (301 aa) fasta scores: E(): 8.8e-74, 57.71% id in 298 aa; hypothetical protein 1936808 3095592 BPSS1422 Burkholderia pseudomallei K96243 hypothetical protein YP_111434.1 1935909 R 272560 CDS YP_111435.1 53722450 3096295 complement(1937183..1938133) 1 NC_006351.1 Similar to Rhizobium meliloti glycine betaine/L-proline ABC transporter ProX SWALL:Q8RPR1 (EMBL:AF360731) (309 aa) fasta scores: E(): 7.1e-57, 52.24% id in 312 aa, and to Brucella suis glycine betaine/L-proline ABC transporter periplasmic glycine betaine-binding protein, br1579 SWALL:AAN30485 (EMBL:AE014452) (322 aa) fasta scores: E(): 6.3e-63, 55.84% id in 308 aa, and to Brucella melitensis glycine betaine/L-proline-binding protein ProX bmei0441 SWALL:Q8YIK3 (EMBL:AE009487) (326 aa) fasta scores: E(): 9.7e-63, 55.51% id in 308 aa; glycine betaine/L-proline ABC transporter substrate-binding protein 1938133 3096295 BPSS1423 Burkholderia pseudomallei K96243 glycine betaine/L-proline ABC transporter substrate-binding protein YP_111435.1 1937183 R 272560 CDS YP_111436.1 53722451 3096864 complement(1938234..1939232) 1 NC_006351.1 Similar to Pseudomonas syringae arginine pathway regulatory protein ArgR SWALL:Q8VVB2 (EMBL:AF443787) (354 aa) fasta scores: E(): 4.9e-35, 40% id in 315 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 2.1e-97, 76.2% id in 332 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 2.4e-67, 56.82% id in 315 aa; AraC transcriptional regulatory protein 1939232 3096864 BPSS1424 Burkholderia pseudomallei K96243 AraC transcriptional regulatory protein YP_111436.1 1938234 R 272560 CDS YP_111437.1 53722452 3096865 complement(1939355..1940257) 1 NC_006351.1 Similar to Lactococcus lactis glycine-betaine binding permease BusAB or OpuabC SWALL:Q9RQ05 (EMBL:AF139575) (573 aa) fasta scores: E(): 7e-47, 50.73% id in 272 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsp0067 or rs02042 SWALL:Q8XTN9 (EMBL:AL646076) (298 aa) fasta scores: E(): 1.7e-94, 84.84% id in 297 aa, and to Brucella melitensis glycine betaine/L-proline transport system permease ProW bmeii0549 SWALL:Q8YCH9 (EMBL:AE009690) (301 aa) fasta scores: E(): 6.5e-59, 58.82% id in 289 aa; glycine-betaine binding ABC transporter permease 1940257 3096865 BPSS1425 Burkholderia pseudomallei K96243 glycine-betaine binding ABC transporter permease YP_111437.1 1939355 R 272560 CDS YP_111438.1 53722453 3095234 complement(1940250..1941419) 1 NC_006351.1 Similar to Salmonella typhimurium glycine betaine/L-proline transport ATP-binding protein ProV or stm2809 SWALL:PROV_SALTY (SWALL:P17328) (400 aa) fasta scores: E(): 2.3e-57, 46.73% id in 398 aa, and to Ralstonia solanacearum glycine betaine/L-proline ATP-binding ABC transporter protein OpuA or rsp0066 or rs02041 SWALL:Q8XTP0 (EMBL:AL646076) (385 aa) fasta scores: E(): 2.3e-106, 82.26% id in 389 aa, and to Brucella melitensis glycine betaine/L-proline transport ATP-binding protein ProV bmeii0548 SWALL:Q8YCI0 (EMBL:AE009690) (398 aa) fasta scores: E(): 4.7e-63, 50.51% id in 392 aa; glycine betaine/L-proline transport ATP-binding protein 1941419 3095234 BPSS1426 Burkholderia pseudomallei K96243 glycine betaine/L-proline transport ATP-binding protein YP_111438.1 1940250 R 272560 CDS YP_111439.1 53722454 3095878 1942199..1942861 1 NC_006351.1 Similar to Streptomyces avermitilis NADPH-dependent fmn reductase SWALL:Q82GT3 (EMBL:AP005036) (203 aa) fasta scores: E(): 1e-28, 50.79% id in 189 aa; hypothetical protein 1942861 3095878 BPSS1427 Burkholderia pseudomallei K96243 hypothetical protein YP_111439.1 1942199 D 272560 CDS YP_111440.1 53722455 3095879 1943447..1943662 1 NC_006351.1 hypothetical protein 1943662 3095879 BPSS1428 Burkholderia pseudomallei K96243 hypothetical protein YP_111440.1 1943447 D 272560 CDS YP_111441.1 53722456 3096411 1943761..1944660 1 NC_006351.1 hypothetical protein 1944660 3096411 BPSS1429 Burkholderia pseudomallei K96243 hypothetical protein YP_111441.1 1943761 D 272560 CDS YP_111442.1 53722457 3095792 1945122..1945457 1 NC_006351.1 Similar to Thiobacillus ferrooxidans ArsR-like protein SWALL:Q9L9D2 (EMBL:AF173880) (118 aa) fasta scores: E(): 1.7e-11, 50.52% id in 95 aa, and to Ralstonia solanacearum arsenical resistance operon repressor transcription regulator protein ArsR or rsp1129 or rs05489 SWALL:Q8XQT9 (EMBL:AL646083) (107 aa) fasta scores: E(): 2.4e-17, 57.14% id in 105 aa, and to Caulobacter crescentus transcriptional regulator, ArsR family cc1505 SWALL:Q9A859 (EMBL:AE005825) (109 aa) fasta scores: E(): 5e-15, 51.57% id in 95 aa; transcription regulator ArsR 1945457 3095792 BPSS1430 Burkholderia pseudomallei K96243 transcription regulator ArsR YP_111442.1 1945122 D 272560 CDS YP_111443.1 53722458 3095793 1945454..1945933 1 NC_006351.1 Similar to Mycobacterium tuberculosis hypothetical protein rv2641 or mt2719 or mtcy441.11 SWALL:YQ41_MYCTU (SWALL:P71940) (152 aa) fasta scores: E(): 9.6e-12, 36.12% id in 155 aa, and to Anabaena sp. hypothetical protein Alr1104 SWALL:Q8YXV5 (EMBL:AP003584) (150 aa) fasta scores: E(): 2.6e-11, 34.21% id in 152 aa; hypothetical protein 1945933 3095793 BPSS1431 Burkholderia pseudomallei K96243 hypothetical protein YP_111443.1 1945454 D 272560 CDS YP_111444.1 53722459 3095736 1945968..1946462 1 NC_006351.1 Similar to Thiobacillus ferrooxidans arsenate reductase ArsC SWALL:Q9L9D3 (EMBL:AF173880) (163 aa) fasta scores: E(): 1.1e-13, 37.83% id in 148 aa, and to Ralstonia solanacearum arsenate reductase ArsC or rsp1128 or rs05491 SWALL:Q8XQU0 (EMBL:AL646083) (164 aa) fasta scores: E(): 7.6e-52, 79.26% id in 164 aa, and to Rhodobacter capsulatus arsenate reductase SWALL:O68076 (EMBL:AF010496) (281 aa) fasta scores: E(): 5.2e-22, 45.57% id in 158 aa; arsenate reductase 1946462 3095736 BPSS1432 Burkholderia pseudomallei K96243 arsenate reductase YP_111444.1 1945968 D 272560 CDS YP_111445.1 53722460 3096313 1946525..1947595 1 NC_006351.1 Similar to Sinorhizobium sp. As4 arsenic resistance ArsB SWALL:Q9RA92 (EMBL:AF178758) (351 aa) fasta scores: E(): 5.8e-24, 30.65% id in 349 aa, and to Agrobacterium tumefaciens sodium bile acid symporter family protein atu1491 or agr_c_2750 SWALL:Q8UFA7 (EMBL:AE009108) (352 aa) fasta scores: E(): 8.7e-87, 71.04% id in 335 aa, and to Pasteurella multocida hypothetical protein Pm1943 SWALL:Q9CJQ1 (EMBL:AE006231) (338 aa) fasta scores: E(): 3.6e-64, 51.66% id in 331 aa; sodium bile acid symporter family protein 1947595 3096313 BPSS1433 Burkholderia pseudomallei K96243 sodium bile acid symporter family protein YP_111445.1 1946525 D 272560 CDS YP_111446.1 53722461 3096314 1948688..1956592 1 NC_006351.1 Similar to C-terminus of Streptococcus pneumoniae cell wall surface anchor family protein sp1772 SWALL:Q97P71 (EMBL:AE007470) (4776 aa) fasta scores: E(): 1.2e-132, 37.46% id in 2565 aa, and to C-terminus of Streptococcus cristatus SrpA SWALL:Q9KX33 (EMBL:U96166) (3381 aa) fasta scores: E(): 8.9e-115, 32.07% id in 2703 aa, and to C-terminus of Streptococcus gordonii streptococcal hemagglutinin Hsa SWALL:Q9KWR3 (EMBL:AB029393) (2178 aa) fasta scores: E(): 1.5e-88, 35.24% id in 2105 aa; membrane-anchored cell surface protein 1956592 3096314 BPSS1434 Burkholderia pseudomallei K96243 membrane-anchored cell surface protein YP_111446.1 1948688 D 272560 CDS YP_111447.1 53722462 3095262 1956745..1957068 1 NC_006351.1 lipoprotein 1957068 3095262 BPSS1437 Burkholderia pseudomallei K96243 lipoprotein YP_111447.1 1956745 D 272560 CDS YP_111448.1 53722463 3095851 1957626..1959422 1 NC_006351.1 C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc3164 or rs00434 SWALL:Q8XUM3 (EMBL:AL646074) (387 aa) fasta scores: E(): 6e-30, 34.75% id in 374 aa, and Caulobacter crescentus protein FlbA or cc1457 SWALL:FLBA_CAUCR (SWALL:P21296) (596 aa) fasta scores: E(): 8.3e-11, 28.22% id in 613 aa; hypothetical protein 1959422 3095851 BPSS1438 Burkholderia pseudomallei K96243 hypothetical protein YP_111448.1 1957626 D 272560 CDS YP_111449.1 53722464 3095852 1960277..1964869 1 NC_006351.1 Similar to C-terminus of Staphylococcus epidermidis streptococcal hemagglutinin protein se2249 SWALL:AAO05891 (EMBL:AE016751) (2310 aa) fasta scores: E(): 1.8e-79, 40.67% id in 1480 aa, and to C-terminus of Streptococcus pneumoniae cell wall surface anchor family protein sp1772 SWALL:Q97P71 (EMBL:AE007470) (4776 aa) fasta scores: E(): 1.1e-73, 36.81% id in 1456 aa. Possible alternative translational start site; membrane-anchored cell surface protein 1964869 3095852 BPSS1439 Burkholderia pseudomallei K96243 membrane-anchored cell surface protein YP_111449.1 1960277 D 272560 CDS YP_111450.1 53722465 3095277 1964863..1966020 1 NC_006351.1 hypothetical protein 1966020 3095277 BPSS1442 Burkholderia pseudomallei K96243 hypothetical protein YP_111450.1 1964863 D 272560 CDS YP_111451.1 53722466 3095411 1966066..1967190 1 NC_006351.1 hypothetical protein 1967190 3095411 BPSS1443 Burkholderia pseudomallei K96243 hypothetical protein YP_111451.1 1966066 D 272560 CDS YP_111452.1 53722467 3095412 complement(1967536..1968717) 1 NC_006351.1 hypothetical protein 1968717 3095412 BPSS1444 Burkholderia pseudomallei K96243 hypothetical protein YP_111452.1 1967536 R 272560 CDS YP_111453.1 53722468 3095238 complement(1968819..1970813) 1 NC_006351.1 Similar to Mycobacterium tuberculosis acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase AccA1 or BccA or rv2501c or mt2576 or mtcy07a7.07C] SWALL:BCCA_MYCTU (SWALL:P46401) (654 aa) fasta scores: E(): 1.3e-95, 47.81% id in 663 aa, and to Xanthomonas campestris biotin carboxylase AccC or xcc0244 SWALL:AAM39563 (EMBL:AE012120) (675 aa) fasta scores: E(): 6e-133, 58.04% id in 665 aa, and to Xanthomonas axonopodis biotin carboxylase AccC or xac0263 SWALL:AAM35155 (EMBL:AE011651) (675 aa) fasta scores: E(): 2e-128, 57.31% id in 663 aa; biotin carboxylase 1970813 3095238 BPSS1445 Burkholderia pseudomallei K96243 biotin carboxylase YP_111453.1 1968819 R 272560 CDS YP_111454.1 53722469 3096105 complement(1970974..1971759) 1 NC_006351.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1971759 3096105 BPSS1446 Burkholderia pseudomallei K96243 enoyl-CoA hydratase YP_111454.1 1970974 R 272560 CDS YP_111455.1 53722470 3096106 complement(1971780..1973387) 1 NC_006351.1 Similar to Homo sapiens methylcrotonyl-coA carboxylase beta chain, mitochondrial precursor MccC2 or MccB SWALL:MCCB_HUMAN (SWALL:Q9HCC0) (563 aa) fasta scores: E(): 1e-140, 66.09% id in 522 aa, and to Ralstonia solanacearum propionyl-coA carboxylase rsc0269 or rs03236 SWALL:Q8Y2R6 (EMBL:AL646058) (535 aa) fasta scores: E(): 4.7e-179, 81.86% id in 535 aa, and to Agrobacterium tumefaciens 3-methylcrotonoyl-coA carboxylase beta subunit MccB or atu3478 or agr_l_2706 SWALL:Q8UA96 (EMBL:AE009278) (537 aa) fasta scores: E(): 4.4e-164, 75.37% id in 532 aa; biotin-dependent carboxyl transferase 1973387 3096106 BPSS1447 Burkholderia pseudomallei K96243 biotin-dependent carboxyl transferase YP_111455.1 1971780 R 272560 CDS YP_111456.1 53722471 3095407 complement(1973410..1974591) 1 NC_006351.1 Similar to Solanum tuberosum isovaleryl-coA dehydrogenase 2, mitochondrial precursor Ivd2 SWALL:Q9FS87 (EMBL:AJ278988) (401 aa) fasta scores: E(): 2.1e-97, 65.54% id in 386 aa, and to Ralstonia solanacearum probable acyl-coA dehydrogenase oxidoreductase rsc0279 or rs03246 SWALL:Q8Y2Q6 (EMBL:AL646058) (393 aa) fasta scores: E(): 8e-131, 82.9% id in 392 aa, and to Xanthomonas campestris acyl-coA dehydrogenase AcdA or xcc0246 SWALL:AAM39565 (EMBL:AE012121) (387 aa) fasta scores: E(): 2.3e-112, 71.86% id in 391 aa; acyl-CoA dehydrogenase 1974591 3095407 BPSS1448 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_111456.1 1973410 R 272560 CDS YP_111457.1 53722472 3097213 1974799..1975563 1 NC_006351.1 Similar to Bacillus subtilis hypothetical protein YsiA SWALL:P94548 (EMBL:Z75208) (194 aa) fasta scores: E(): 4.3e-10, 21.87% id in 192 aa, and to Bacillus cereus transcriptional regulator, TetR family SWALL:Q72ZL6 (EMBL:AE017278) (195 aa) fasta scores: E(): 3.4e-08, 24.06% id in 187 aa. CDS is extended at the N- and C-termini in comparison to similar proteins. Possible pseudogene; TetR family transcriptional regulator 1975563 3097213 BPSS1449 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_111457.1 1974799 D 272560 CDS YP_111458.1 53722473 3095134 1978963..1980426 1 NC_006351.1 Similar to Neisseria gonorrhoeae major outer membrane protein Pan 1 precursor AniA SWALL:ANIA_NEIGO (SWALL:Q02219) (392 aa) fasta scores: E(): 7.9e-20, 31.92% id in 379 aa, and to Hyphomicrobium denitrificans nitrite reductase precursor NirK SWALL:Q8KKH4 (EMBL:AB076606) (486 aa) fasta scores: E(): 1.8e-20, 29.76% id in 467 aa. CDS is extended at the C-terminus in comparison to similar proteins; copper nitrite reductase 1980426 3095134 BPSS1452 Burkholderia pseudomallei K96243 copper nitrite reductase YP_111458.1 1978963 D 272560 CDS YP_111459.1 53722474 3095103 1980962..1984240 1 NC_006351.1 Possible gene fusion. N-terminus is similar to Rhodococcus sp. I24 nidA dioxygenase large subunit NidA SWALL:Q9X593 (EMBL:AF121905) (468 aa) fasta scores: E(): 7.4e-07, 32.74% id in 113 aa. C-terminus is similar to Vibrio alginolyticus carboxynorspermidine decarboxylase NspC SWALL:Q56575 (EMBL:D31783) (377 aa) fasta scores: E(): 6.9e-33, 30.37% id in 372 aa; bifunctional protein GlmU 1984240 3095103 BPSS1453 Burkholderia pseudomallei K96243 bifunctional protein GlmU YP_111459.1 1980962 D 272560 CDS YP_111460.1 53722475 3095104 1984227..1985591 1 NC_006351.1 C-terminal region is similar to Anabaena sp. hypothetical protein Alr0786 SWALL:Q8YYR0 (EMBL:AP003583) (344 aa) fasta scores: E(): 3.2e-29, 34.19% id in 348 aa, and Synechocystis sp. hypothetical protein Slr1287 SWALL:P74202 (EMBL:D90913) (336 aa) fasta scores: E(): 1.1e-24, 34.22% id in 336 aa. Possible alternative translational start site; hypothetical protein 1985591 3095104 BPSS1454 Burkholderia pseudomallei K96243 hypothetical protein YP_111460.1 1984227 D 272560 CDS YP_111461.1 53722476 3096827 1985593..1986384 1 NC_006351.1 Weakly similar to internal regions of Homo sapiens hypothetical protein Kiaa0585 SWALL:Q9Y4E2 (EMBL:AB011157) (416 aa) fasta scores: E(): 3.4e-14, 29.88% id in 261 aa, and Mus musculus apoptotic cell clearance receptor Ptdserr PtdsR SWALL:Q9ERI5 (EMBL:AF304118) (403 aa) fasta scores: E(): 4.5e-14, 29.5% id in 261 aa; hypothetical protein 1986384 3096827 BPSS1455 Burkholderia pseudomallei K96243 hypothetical protein YP_111461.1 1985593 D 272560 CDS YP_111462.1 53722477 3095005 1986772..1987392 1 NC_006351.1 hypothetical protein 1987392 3095005 BPSS1456 Burkholderia pseudomallei K96243 hypothetical protein YP_111462.1 1986772 D 272560 CDS YP_111463.1 53722478 3095006 1987533..1988546 1 NC_006351.1 Similar to Caulobacter crescentus hypothetical protein Cc1198 SWALL:Q9A8Z7 (EMBL:AE005797) (331 aa) fasta scores: E(): 4.5e-83, 62.23% id in 331 aa, and to Campylobacter jejuni hypothetical protein Cj0554 SWALL:Q9PHW0 (EMBL:AL139075) (334 aa) fasta scores: E(): 2.4e-64, 48.77% id in 326 aa, and to Streptomyces coelicolor hypothetical protein sco0437 or scf51a.15C SWALL:Q9RL49 (EMBL:AL939105) (341 aa) fasta scores: E(): 1e-54, 48.94% id in 331 aa; hypothetical protein 1988546 3095006 BPSS1457 Burkholderia pseudomallei K96243 hypothetical protein YP_111463.1 1987533 D 272560 CDS YP_111464.1 53722479 3097090 complement(1989047..1990465) 1 NC_006351.1 Similar to Comamonas testosteroni transporter PmdK SWALL:Q93PT0 (EMBL:AF305325) (465 aa) fasta scores: E(): 1e-16, 26.15% id in 455 aa, and to Xanthomonas campestris MFS transporter xcc1685 SWALL:AAM40979 (EMBL:AE012270) (468 aa) fasta scores: E(): 2.2e-83, 50.98% id in 459 aa, and to Xanthomonas axonopodis MFS transporter xac1705 SWALL:AAM36572 (EMBL:AE011802) (474 aa) fasta scores: E(): 4.2e-78, 49.56% id in 462 aa; major facilitator transporter 1990465 3097090 BPSS1458 Burkholderia pseudomallei K96243 major facilitator transporter YP_111464.1 1989047 R 272560 CDS YP_111465.1 53722480 3097091 complement(1990568..1991350) 1 NC_006351.1 Similar to Saccharomyces cerevisiae hypothetical 27.4 kDa protein in Hyr1 3'region yir042C SWALL:YIW2_YEAST (SWALL:P40586) (236 aa) fasta scores: E(): 8e-44, 51.94% id in 231 aa, and to Yersinia pestis hypothetical 27.4 kDa protein ypo1955 or y2355 SWALL:Q9ZC61 (EMBL:AL031866) (299 aa) fasta scores: E(): 1e-40, 46.48% id in 256 aa; acetyltransferase 1991350 3097091 BPSS1459 Burkholderia pseudomallei K96243 acetyltransferase YP_111465.1 1990568 R 272560 CDS YP_111466.1 53722481 3096383 complement(1991964..1993325) 1 NC_006351.1 Similar to Pseudomonas sp. JR1 two-component sensor ArmS SWALL:Q9KJZ1 (EMBL:AF155506) (440 aa) fasta scores: E(): 7.1e-18, 32.31% id in 359 aa, and to Brucella melitensis two-component system sensor bmeII1015 SWALL:Q8YB85 (EMBL:AE009734) (447 aa) fasta scores: E(): 7.6e-71, 51.03% id in 437 aa, and to Agrobacterium tumefaciens two component sensor kinase atu4018 or agr_l_1672 SWALL:Q8U8S2 (EMBL:AE009332) (445 aa) fasta scores: E(): 2.3e-46, 37.69% id in 443 aa; two-component sensor kinase 1993325 3096383 BPSS1460 Burkholderia pseudomallei K96243 two-component sensor kinase YP_111466.1 1991964 R 272560 CDS YP_111467.1 53722482 3095218 complement(1993328..1993987) 1 NC_006351.1 Similar to Pseudomonas sp. JR1 response regulator ArmR SWALL:Q9KJZ2 (EMBL:AF155506) (227 aa) fasta scores: E(): 6.5e-32, 45.37% id in 216 aa, and to Brucella melitensis two component response regulator bmIIi1014 SWALL:Q8YB86 (EMBL:AE009734) (225 aa) fasta scores: E(): 2.6e-52, 67.13% id in 216 aa, and to Agrobacterium tumefaciens two component response regulator atu4019 or agr_l_1670 SWALL:Q8U8S1 (EMBL:AE009332) (217 aa) fasta scores: E(): 4.5e-40, 52.99% id in 217 aa; two-component response regulator 1993987 3095218 BPSS1461 Burkholderia pseudomallei K96243 two-component response regulator YP_111467.1 1993328 R 272560 CDS YP_111468.1 53722483 3095219 1994219..1994575 1 NC_006351.1 Similar to Brucella melitensis hypothetical cytosolic protein BmeII1013 SWALL:Q8YB87 (EMBL:AE009734) (111 aa) fasta scores: E(): 4.9e-14, 43.22% id in 118 aa, and to Brucella melitensis hypothetical cytosolic protein Bmei0390 SWALL:Q8YIQ3 (EMBL:AE009481) (87 aa) fasta scores: E(): 0.00027, 37.34% id in 83 aa; hypothetical protein 1994575 3095219 BPSS1462 Burkholderia pseudomallei K96243 hypothetical protein YP_111468.1 1994219 D 272560 CDS YP_111469.1 53722484 3096267 1995364..1995831 1 NC_006351.1 Similar to Brucella melitensis hypothetical protein Bmeii1012 SWALL:Q8YB88 (EMBL:AE009733) (156 aa) fasta scores: E(): 3.9e-31, 57.41% id in 155 aa; hypothetical protein 1995831 3096267 BPSS1463 Burkholderia pseudomallei K96243 hypothetical protein YP_111469.1 1995364 D 272560 CDS YP_111470.1 53722485 3095716 1995853..1998192 1 NC_006351.1 Similar to Brucella melitensis sulfite reductase bmeii1011 SWALL:Q8YB89 (EMBL:AE009733) (733 aa) fasta scores: E(): 3.7e-34, 44.75% id in 782 aa, and to Caulobacter crescentus sulfite reductase cc3063 SWALL:Q9A3Y7 (EMBL:AE005969) (504 aa) fasta scores: E(): 9.1e-17, 31.37% id in 510 aa; transmembrane NADPH flavoprotein 1998192 3095716 BPSS1464 Burkholderia pseudomallei K96243 transmembrane NADPH flavoprotein YP_111470.1 1995853 D 272560 CDS YP_111471.1 53722486 3095717 1998173..1999402 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O157:H7 thiamine biosynthesis lipoprotein ApbE precursor apbE SWALL:APBE_ECOLI (SWALL:P33944) (351 aa) fasta scores: E(): 8.5e-19, 28.42% id in 380 aa, and to Brucella melitensis thiamine biosynthesis lipoprotein ApbE precursor SWALL:Q8YB90 (EMBL:AE009733) (325 aa) fasta scores: E(): 2.2e-34, 42.64% id in 394 aa. CDS contains additional internal residues in comparison to orthologues; thiamine biosynthesis lipoprotein 1999402 3095717 BPSS1465 Burkholderia pseudomallei K96243 thiamine biosynthesis lipoprotein YP_111471.1 1998173 D 272560 CDS YP_111472.1 53722487 3096623 complement(1999417..2000928) 1 NC_006351.1 Similar to Streptomyces clavuligerus semialdehyde dehydrogenase Pcd SWALL:O85725 (EMBL:AF073895) (512 aa) fasta scores: E(): 2e-120, 66.05% id in 492 aa, and to Ralstonia solanacearum transmembrane aldehyde dehydrogenase oxidoreductase rsp1591 or rs02148 SWALL:Q8XPP7 (EMBL:AL646085) (504 aa) fasta scores: E(): 9.4e-134, 69.84% id in 504 aa, and to Rhizobium loti aldehyde dehydrogenase mll2867 SWALL:Q98HH4 (EMBL:AP003000) (504 aa) fasta scores: E(): 4.1e-132, 68.93% id in 499 aa; aldehyde dehydrogenase 2000928 3096623 BPSS1466 Burkholderia pseudomallei K96243 aldehyde dehydrogenase YP_111472.1 1999417 R 272560 CDS YP_111473.1 53722488 3096259 complement(2001096..2002322) 1 NC_006351.1 Similar to Streptomyces coelicolor aminotransferase sco3306 or sce68.04C SWALL:Q9WX27 (EMBL:AL939116) (404 aa) fasta scores: E(): 1.2e-64, 50.5% id in 400 aa, and to Ralstonia solanacearum aminotransferase rsc0229 or rs00661 SWALL:Q8Y2V3 (EMBL:AL646058) (402 aa) fasta scores: E(): 1e-56, 47.08% id in 395 aa, and to Pyrococcus abyssi aminotransferase pab2227 SWALL:Q9V282 (EMBL:AJ248283) (410 aa) fasta scores: E(): 3.6e-53, 39.54% id in 397 aa; aminotransferase 2002322 3096259 BPSS1467 Burkholderia pseudomallei K96243 aminotransferase YP_111473.1 2001096 R 272560 CDS YP_111474.1 53722489 3096260 complement(2002377..2003396) 1 NC_006351.1 C-terminal region is similar to Anabaena sp. hypothetical protein Alr2404 alr2404 SWALL:Q8YUE6 (EMBL:AP003589) (313 aa) fasta scores: E(): 1.2e-08, 26.86% id in 309 aa. Possible alternative translation start sites; hypothetical protein 2003396 3096260 BPSS1468 Burkholderia pseudomallei K96243 hypothetical protein YP_111474.1 2002377 R 272560 CDS YP_111475.1 53722490 3096072 2003571..2004479 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 4.1e-31, 38.77% id in 294 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1593 or rs02150 SWALL:Q8XPP5 (EMBL:AL646085) (296 aa) fasta scores: E(): 5.1e-60, 55.89% id in 297 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0448 SWALL:Q9I670 (EMBL:AE004482) (302 aa) fasta scores: E(): 1.4e-54, 53% id in 300 aa; LysR family transcriptional regulator 2004479 3096072 BPSS1469 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111475.1 2003571 D 272560 CDS YP_111476.1 53722491 3095479 2004540..2005028 1 NC_006351.1 N-terminal region is similar to Ralstonia solanacearum hypothetical protein RSC0264 SWALL:Q8Y2S1 (EMBL:AL646058) (99 aa) fasta scores: E(): 1.6e-06, 47.72% id in 88 aa. CDS contains an alanine rich region towards the C-terminus; hypothetical protein 2005028 3095479 BPSS1469a Burkholderia pseudomallei K96243 hypothetical protein YP_111476.1 2004540 D 272560 CDS YP_111477.1 53722492 3095480 2005276..2006577 1 NC_006351.1 Similar to Escherichia coli probable oxidoreductase OrdL or b1301 SWALL:ORDL_ECOLI (SWALL:P37906) (426 aa) fasta scores: E(): 9.2e-41, 37.43% id in 390 aa, and to Rhizobium meliloti oxidoreductase ordl3 or r02961 or smc03132 SWALL:Q92LR9 (EMBL:AL591792) (426 aa) fasta scores: E(): 1.7e-56, 42.99% id in 414 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2776 pa2776 SWALL:Q9I067 (EMBL:AE004705) (427 aa) fasta scores: E(): 1.6e-46, 39% id in 423 aa; FAD-binding oxidoreductase 2006577 3095480 BPSS1470 Burkholderia pseudomallei K96243 FAD-binding oxidoreductase YP_111477.1 2005276 D 272560 CDS YP_111478.1 53722493 3095626 2006630..2007328 1 NC_006351.1 Similar to Ralstonia solanacearum transcription regulator protein rsp1395 or rs02063 SWALL:Q8XQ91 (EMBL:AL646084) (224 aa) fasta scores: E(): 2.7e-40, 53.15% id in 222 aa, and to Rhizobium meliloti hypothetical transcriptional regulator protein smb20033 rb0036 or smb20033 SWALL:Q92XC6 (EMBL:AL603642) (220 aa) fasta scores: E(): 1.1e-39, 55.02% id in 209 aa. Possible alternative translation start site after codon 8.; TetR family transcriptional regulator 2007328 3095626 BPSS1471 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_111478.1 2006630 D 272560 CDS YP_111479.2 229269500 3096612 2007941..2009203 1 NC_006351.1 Similar to Shigella flexneri transposase for IS110 s0128 SWALL:Q9AFS5 (EMBL:AF348706) (398 aa) fasta scores: E(): 8.1e-116, 79.64% id in 398 aa, and to Streptomyces coelicolor insertion element IS110 hypothetical 43.6 kDa protein SWALL:YIS1_STRCO (SWALL:P19780) (405 aa) fasta scores: E(): 1.1e-79, 59.74% id in 395 aa. Note: Also similar to BPSS0338 (427 aa) fasta scores: E(): 2.5e-113, 88.732% identity in 426 aa overlap; transposase 2009203 3096612 BPSS1472 Burkholderia pseudomallei K96243 transposase YP_111479.2 2007941 D 272560 CDS YP_111480.1 53722495 3096613 complement(2009252..2011057) 1 NC_006351.1 Limited similarity to Rhizobium meliloti hypothetical protein ra1102 or sma2012 SWALL:Q92XY6 (EMBL:AE007296) (638 aa) fasta scores: E(): 0.00033, 26.1% id in 544 aa; hypothetical protein 2011057 3096613 BPSS1473 Burkholderia pseudomallei K96243 hypothetical protein YP_111480.1 2009252 R 272560 CDS YP_111481.1 53722496 3096929 complement(2011759..2012517) 1 NC_006351.1 Similar to Escherichia coli glycerol-3-phosphate regulon repressor GlpR or b3423 SWALL:GLPR_ECOLI (SWALL:P09392) (252 aa) fasta scores: E(): 2e-21, 32.14% id in 252 aa, and to Rhizobium meliloti transcriptional regulator, GntR family protein rb0973 or smb21533 SWALL:Q92UW3 (EMBL:AL603645) (261 aa) fasta scores: E(): 5.3e-33, 44.57% id in 249 aa, and to Rhizobium loti transcriptional regulator mlr5371 SWALL:Q98BY9 (EMBL:AP003006) (258 aa) fasta scores: E(): 9e-23, 35.96% id in 253 aa; DeoR family transcriptional regulator 2012517 3096929 BPSS1474 Burkholderia pseudomallei K96243 DeoR family transcriptional regulator YP_111481.1 2011759 R 272560 CDS YP_111482.1 53722497 3096661 complement(2013143..2014453) 1 NC_006351.1 Similar to Bacillus subtilis hexuronate transporter ExuT SWALL:EXUT_BACSU (SWALL:O34456) (422 aa) fasta scores: E(): 1.6e-32, 47.3% id in 408 aa, and to Salmonella typhimurium transport protein stm1543 SWALL:Q8ZPG6 (EMBL:AE008767) (428 aa) fasta scores: E(): 4.4e-89, 54.73% id in 422 aa. Possible alternative translation start site after codon 5.; transmembrane sugar transporter 2014453 3096661 BPSS1475 Burkholderia pseudomallei K96243 transmembrane sugar transporter YP_111482.1 2013143 R 272560 CDS YP_111483.1 53722498 3096662 complement(2014766..2016235) 1 NC_006351.1 Similar to Pseudomonas fluorescens mannitol 2-dehydrogenase MtlD SWALL:O08355 (EMBL:AF007800) (493 aa) fasta scores: E(): 2.3e-53, 38.74% id in 431 aa, and to Brucella melitensis D-mannonate oxidoreductase bmeII0478 SWALL:Q8YCQ0 (EMBL:AE009684) (502 aa) fasta scores: E(): 3.1e-68, 44.9% id in 461 aa, and to Rhizobium meliloti D-mannonate oxidoreductase UxuB or rb1441 or smb20749 SWALL:Q92TQ9 (EMBL:AL603647) (487 aa) fasta scores: E(): 3.9e-67, 45.16% id in 476 aa; mannitol dehydrogenase 2016235 3096662 BPSS1476 Burkholderia pseudomallei K96243 mannitol dehydrogenase YP_111483.1 2014766 R 272560 CDS YP_111484.1 53722499 3097171 2016410..2017135 1 NC_006351.1 Similar to Bacillus stearothermophilus regulatory protein UxuR SWALL:Q9ZFL9 (EMBL:AF098273) (249 aa) fasta scores: E(): 7.3e-13, 30.55% id in 216 aa, and to Salmonella typhimurium, and Salmonella typhi regulatory protein, GntR family ydfh or stm1510 or sty1551 SWALL:Q8XFZ6 (EMBL:AE008766) (228 aa) fasta scores: E(): 1.5e-17, 31.36% id in 220 aa, and to Rhizobium meliloti GntR-family transcriptional regulator ra0032 or sma0065 SWALL:Q931B2 (EMBL:AE007198) (230 aa) fasta scores: E(): 1.8e-17, 33.93% id in 221 aa; GntR family transcriptional regulator 2017135 3097171 BPSS1477 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_111484.1 2016410 D 272560 CDS YP_111485.1 53722500 3095526 2017157..2018365 1 NC_006351.1 Similar to Escherichia coli starvation sensing protein RspA or b1581 SWALL:RSPA_ECOLI (SWALL:P38104) (404 aa) fasta scores: E(): 4.3e-108, 65.84% id in 404 aa, and to Caulobacter crescentus mandelate racemase / muconate lactonizing enzyme family cc2812 SWALL:Q9A4L8 (EMBL:AE005947) (403 aa) fasta scores: E(): 3.6e-113, 70.82% id in 401 aa, and to Xanthomonas campestris starvation sensing protein rspa or xcc4104 SWALL:AAM43325 (EMBL:AE012534) (419 aa) fasta scores: E(): 5.4e-109, 69.36% id in 395 aa; mandelate racemase 2018365 rspA 3095526 rspA Burkholderia pseudomallei K96243 mandelate racemase YP_111485.1 2017157 D 272560 CDS YP_111486.1 53722501 3095731 2018414..2019445 1 NC_006351.1 Similar to Escherichia coli starvation sensing protein RspB or b1580 SWALL:RSPB_ECOLI (SWALL:P38105) (339 aa) fasta scores: E(): 4.3e-69, 52.33% id in 342 aa, and to Salmonella typhimurium dehydrogenase RspB or stm1506 SWALL:Q8ZPJ0 (EMBL:AE008765) (339 aa) fasta scores: E(): 7.5e-69, 52.92% id in 342 aa, and to Bacillus subtilis zinc-containing alcohol dehydrogenase YjmD SWALL:O35045 (EMBL:AF015825) (339 aa) fasta scores: E(): 3.2e-43, 38.01% id in 342 aa; dehydrogenase 2019445 rspB 3095731 rspB Burkholderia pseudomallei K96243 dehydrogenase YP_111486.1 2018414 D 272560 CDS YP_111487.1 53722502 3095632 2020393..2020578 1 NC_006351.1 hypothetical protein 2020578 3095632 BPSS1480 Burkholderia pseudomallei K96243 hypothetical protein YP_111487.1 2020393 D 272560 CDS YP_111488.1 53722503 3095004 2020691..2021569 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa3358 SWALL:Q9HYN8 (EMBL:AE004758) (292 aa) fasta scores: E(): 2.1e-30, 43.36% id in 279 aa, and to Rhizobium meliloti hypothetical membrane protein smb20885 rb1179 or smb20885 SWALL:Q92UF2 (EMBL:AL603646) (306 aa) fasta scores: E(): 4.8e-30, 38.94% id in 285 aa; hypothetical protein 2021569 3095004 BPSS1481 Burkholderia pseudomallei K96243 hypothetical protein YP_111488.1 2020691 D 272560 CDS YP_111489.1 53722504 3097154 2021925..2022779 1 NC_006351.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2022779 nadE 3097154 nadE Burkholderia pseudomallei K96243 NAD synthetase YP_111489.1 2021925 D 272560 CDS YP_111490.1 53722505 3095007 complement(2023034..2024068) 1 NC_006351.1 No significant database matches to the full length CDS. N-terminal region is similar to Rhizobium loti transcriptional regulator mll3386 SWALL:Q98GC7 (EMBL:AP003001) (219 aa) fasta scores: E(): 1.2e-20, 50.25% id in 193 aa, and Yersinia pestis TetR-family regulatory protein ypo3840 or y0390 SWALL:Q8ZAG2 (EMBL:AJ414159) (228 aa) fasta scores: E(): 4e-15, 52.5% id in 200 aa; TetR family transcriptional regulator 2024068 3095007 BPSS1483 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_111490.1 2023034 R 272560 CDS YP_111491.1 53722506 3095008 2024180..2025397 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo3839 or y0391 SWALL:Q8ZAG3 (EMBL:AJ414159) (405 aa) fasta scores: E(): 1.8e-95, 67.09% id in 392 aa, and to Rhizobium loti hypothetical protein Mll9388 SWALL:Q981G1 (EMBL:AP003016) (408 aa) fasta scores: E(): 5.3e-85, 59.43% id in 392 aa; hypothetical protein 2025397 3095008 BPSS1484 Burkholderia pseudomallei K96243 hypothetical protein YP_111491.1 2024180 D 272560 CDS YP_111492.1 53722507 3096891 2025394..2026242 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo3838 or y0392 SWALL:Q8ZAG4 (EMBL:AJ414159) (280 aa) fasta scores: E(): 2e-84, 80.43% id in 276 aa, and to Rhizobium sp. hypothetical 30.2 kDa protein Y4oV SWALL:Y4OV_RHISN (SWALL:P55607) (285 aa) fasta scores: E(): 1.3e-71, 69.53% id in 279 aa; hypothetical protein 2026242 3096891 BPSS1485 Burkholderia pseudomallei K96243 hypothetical protein YP_111492.1 2025394 D 272560 CDS YP_111493.1 53722508 3096318 2026288..2026728 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein Mlr1698 SWALL:Q98K03 (EMBL:AP002998) (147 aa) fasta scores: E(): 1.4e-18, 45.11% id in 133 aa, and to Yersinia pestis hypothetical protein ypo0625 or y3553 SWALL:Q8ZI86 (EMBL:AJ414143) (148 aa) fasta scores: E(): 7.1e-13, 36.29% id in 135 aa; hypothetical protein 2026728 3096318 BPSS1486 Burkholderia pseudomallei K96243 hypothetical protein YP_111493.1 2026288 D 272560 CDS YP_111494.1 53722509 3096319 2027135..2028697 1 NC_006351.1 Similar to Ralstonia solanacearum probable major anaerobically induced outer membrane transmembrane protein rsp1503 or rs03038 SWALL:Q8XPY3 (EMBL:AL646085) (510 aa) fasta scores: E(): 3.3e-93, 71.45% id in 522 aa, and to Neisseria meningitidis nitrite reductase, major outer membrane copper-containing protein AniA or nma1887 SWALL:Q9JTB8 (EMBL:AL162757) (386 aa) fasta scores: E(): 1.9e-67, 58.26% id in 357 aa, and to Neisseria meningitidis major anaerobically induced outer membrane protein nmb1623 SWALL:Q9JYE1 (EMBL:AE002512) (390 aa) fasta scores: E(): 3.1e-67, 57.7% id in 357 aa; anaerobically induced outer membrane protein 2028697 3096319 BPSS1487 Burkholderia pseudomallei K96243 anaerobically induced outer membrane protein YP_111494.1 2027135 D 272560 CDS YP_111495.1 53722510 3096006 2028722..2029558 1 NC_006351.1 Similar to Ralstonia solanacearum probable signal peptide protein rsp1502 or rs03039 SWALL:Q8XPY4 (EMBL:AL646085) (263 aa) fasta scores: E(): 2.4e-78, 74.14% id in 263 aa, and to Neisseria meningitidis hypothetical protein Nma1888 SWALL:Q9JTB7 (EMBL:AL162757) (251 aa) fasta scores: E(): 8.8e-30, 38.71% id in 248 aa. CDs is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site; hypothetical protein 2029558 3096006 BPSS1488 Burkholderia pseudomallei K96243 hypothetical protein YP_111495.1 2028722 D 272560 CDS YP_111496.1 53722511 3095175 2029555..2030169 1 NC_006351.1 Similar to Ralstonia solanacearum probable signal peptide protein rsp1501 or rs03040 SWALL:Q8XPY5 (EMBL:AL646085) (194 aa) fasta scores: E(): 1.4e-39, 63.1% id in 187 aa, and to Bacillus sp MnxC mnxC SWALL:Q45436 (EMBL:U31081) (195 aa) fasta scores: E(): 6.3e-09, 33.79% id in 145 aa, and to Aquifex aeolicus hypothetical protein Aq_2194 aq_2194 SWALL:O67938 (EMBL:AE000777) (232 aa) fasta scores: E(): 1.7e-08, 27.1% id in 166 aa; hypothetical protein 2030169 3095175 BPSS1489 Burkholderia pseudomallei K96243 hypothetical protein YP_111496.1 2029555 D 272560 CDS YP_111497.1 53722512 3095176 2031208..2032233 1 NC_006351.1 Similar to Ralstonia solanacearum N-acetylmuramoyl-L-alanine amidase rsc1796 or rs04196 SWALL:Q8XYG2 (EMBL:AL646066) (343 aa) fasta scores: E(): 1.2e-79, 65.31% id in 320 aa, and to Yersinia pestis probable N-acetylmuramoyl-L-alanine amidase ypo1715 or y1877 SWALL:Q8ZFI8 (EMBL:AJ414150) (283 aa) fasta scores: E(): 6.1e-40, 51.19% id in 252 aa, and to Salmonella typhi N-acetylmuramoyl-L-alanine amidase sty0927 SWALL:Q8Z834 (EMBL:AL627268) (276 aa) fasta scores: E(): 1.1e-34, 46.94% id in 262 aa; N-acetylmuramoyl-L-alanine amidase 2032233 3095176 BPSS1490 Burkholderia pseudomallei K96243 N-acetylmuramoyl-L-alanine amidase YP_111497.1 2031208 D 272560 CDS YP_111498.1 53722513 3096138 2032502..2033761 1 NC_006351.1 Similar to Escherichia coli hypothetical glycosyltransferase TibC SWALL:Q9S4K6 (EMBL:AF131891) (406 aa) fasta scores: E(): 2.5e-60, 45.45% id in 363 aa, and to Escherichia coli plasmid pib6 orfa DNA SWALL:Q93K96 (EMBL:AJ304444) (391 aa) fasta scores: E(): 8e-56, 42% id in 369 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative out of frame downstream translational start site, therefore CDS could be pseudogene; hypothetical protein 2033761 3096138 BPSS1491 Burkholderia pseudomallei K96243 hypothetical protein YP_111498.1 2032502 D 272560 CDS YP_111499.1 53722514 3097017 2033784..2035334 1 NC_006351.1 C-terminus is similar to Ralstonia solanacearum hemagglutinin-related protein rsp1620 or rs02177 SWALL:Q8XPL8 (EMBL:AL646086) (1309 aa) fasta scores: E(): 5.5e-12, 35.51% id in 428 aa; hypothetical protein 2035334 3097017 BPSS1492 Burkholderia pseudomallei K96243 hypothetical protein YP_111499.1 2033784 D 272560 CDS YP_111500.1 53722515 3097018 complement(2036034..2037980) 1 NC_006351.1 Weakly similar to Pseudomonas aeruginosa hypothetical protein Pa1656 SWALL:Q9I369 (EMBL:AE004593) (518 aa) fasta scores: E(): 8.7e-06, 25.93% id in 590 aa, and to Yersinia pestis hypothetical protein ypo1483 or y2687 SWALL:Q8ZG37 (EMBL:AJ414148) (533 aa) fasta scores: E(): 3.8e-05, 25.13% id in 378 aa; hypothetical protein 2037980 3097018 BPSS1493 Burkholderia pseudomallei K96243 hypothetical protein YP_111500.1 2036034 R 272560 CDS YP_111501.1 53722516 3097012 complement(2037977..2038714) 1 NC_006351.1 Similar to Rhizobium sp LcrB protein SWALL:Q53167 (EMBL:M38698) (238 aa) fasta scores: E(): 9.9e-34, 43.16% id in 234 aa, and to Agrobacterium tumefaciens Tiorf152 protein SWALL:BAA87777 (EMBL:AB016260) (253 aa) fasta scores: E(): 3.5e-32, 41% id in 239 aa, and to Agrobacterium tumefaciens regulatory protein VirG or atu6178 or agr_pti_15 SWALL:VIRG_AGRT5 (SWALL:P07545) (253 aa) fasta scores: E(): 3.5e-32, 41% id in 239 aa; two-component response regulator protein 2038714 3097012 BPSS1494 Burkholderia pseudomallei K96243 two-component response regulator protein YP_111501.1 2037977 R 272560 CDS YP_111502.1 53722517 3096752 complement(2038711..2040555) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable two-component sensor pa2571 SWALL:Q9I0R5 (EMBL:AE004685) (470 aa) fasta scores: E(): 4.9e-11, 26.43% id in 401 aa, and to Chlorobium tepidum sensor histidine kinase/response regulator ct1396 SWALL:AAM72624 (EMBL:AE012897) (808 aa) fasta scores: E(): 2.1e-06, 29.09% id in 409 aa, and to Anabaena sp. two-component hybrid sensor and regulator alr1968 SWALL:Q8YVK7 (EMBL:AP003587) (759 aa) fasta scores: E(): 2.3e-06, 29.8% id in 312 aa; two-component regulator sensor kinase 2040555 3096752 BPSS1495 Burkholderia pseudomallei K96243 two-component regulator sensor kinase YP_111502.1 2038711 R 272560 CDS YP_111503.1 53722518 3096753 2040815..2041309 1 NC_006351.1 Similar to Vibrio cholerae hypothetical protein Vca0107 SWALL:Q9KN58 (EMBL:AE004353) (168 aa) fasta scores: E(): 2.3e-28, 55.9% id in 161 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1657 SWALL:Q9I368 (EMBL:AE004593) (168 aa) fasta scores: E(): 3.5e-28, 51.55% id in 161 aa, and to Yersinia pestis hypothetical protein Ypo3707 SWALL:Q8ZAT3 (EMBL:AJ414158) (165 aa) fasta scores: E(): 2.6e-24, 47.59% id in 166 aa; hypothetical protein 2041309 3096753 BPSS1496 Burkholderia pseudomallei K96243 hypothetical protein YP_111503.1 2040815 D 272560 CDS YP_111504.1 53722519 3096333 2041333..2042832 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa1658 SWALL:Q9I367 (EMBL:AE004593) (491 aa) fasta scores: E(): 9.7e-131, 66.03% id in 474 aa, and to Vibrio cholerae hypothetical protein Vca0108 SWALL:Q9KN57 (EMBL:AE004353) (492 aa) fasta scores: E(): 3.2e-123, 61.45% id in 480 aa, and to Yersinia pestis hypothetical protein ypo3706 or y0038 SWALL:Q8ZAT4 (EMBL:AJ414158) (493 aa) fasta scores: E(): 9.9e-120, 59.67% id in 491 aa; hypothetical protein 2042832 3096333 BPSS1497 Burkholderia pseudomallei K96243 hypothetical protein YP_111504.1 2041333 D 272560 CDS YP_111505.1 53722520 3095204 2043052..2043561 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo1470 or ypo0973 or y2700 or y3363 SWALL:Q8XGB3 (EMBL:AJ414148) (163 aa) fasta scores: E(): 0.0042, 24.84% id in 161 aa, and to Pseudomonas aeruginosa secreted protein Hcp (HcpB or pa5267) and (HcpC or pa0263) and (hc or pa1512) SWALL:Q9HI36 (EMBL:AE004939) (172 aa) fasta scores: E(): 0.013, 25.14% id in 175 aa; hypothetical protein 2043561 3095204 BPSS1498 Burkholderia pseudomallei K96243 hypothetical protein YP_111505.1 2043052 D 272560 CDS YP_111506.1 53722521 3095205 2043554..2044015 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa1659 SWALL:Q9I366 (EMBL:AE004593) (135 aa) fasta scores: E(): 0.00057, 29.24% id in 106 aa, and to Yersinia pestis hypothetical protein Ypo1488 SWALL:Q8ZG31 (EMBL:AJ414148) (150 aa) fasta scores: E(): 0.00084, 30.76% id in 117 aa; hypothetical protein 2044015 3095205 BPSS1499 Burkholderia pseudomallei K96243 hypothetical protein YP_111506.1 2043554 D 272560 CDS YP_111507.1 53722522 3096930 2044052..2045794 1 NC_006351.1 Similar to Vibrio cholerae hypothetical protein Vca0110 SWALL:Q9KN55 (EMBL:AE004353) (589 aa) fasta scores: E(): 1.4e-37, 33.77% id in 598 aa, and to Yersinia pestis hypothetical protein ypo1485 or y2684 SWALL:Q8ZG34 (EMBL:AJ414148) (587 aa) fasta scores: E(): 2.5e-37, 33.39% id in 587 aa; hypothetical protein 2045794 3096930 BPSS1500 Burkholderia pseudomallei K96243 hypothetical protein YP_111507.1 2044052 D 272560 CDS YP_111508.1 53722523 3096693 2045782..2046804 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa1661 pa1661 SWALL:Q9I364 (EMBL:AE004594) (335 aa) fasta scores: E(): 9e-25, 31.56% id in 320 aa, and to Xanthomonas axonopodis hypothetical protein Xac4141 xac4141 SWALL:AAM38976 (EMBL:AE012064) (346 aa) fasta scores: E(): 3.3e-21, 31.76% id in 318 aa; hypothetical protein 2046804 3096693 BPSS1501 Burkholderia pseudomallei K96243 hypothetical protein YP_111508.1 2045782 D 272560 CDS YP_111509.1 53722524 3096694 2046791..2049829 1 NC_006351.1 Similar to Yersinia enterocolitica clp protease-associated protein ClpB SWALL:Q9F746 (EMBL:AF285784) (890 aa) fasta scores: E(): 7.8e-55, 41.06% id in 962 aa, and to Ralstonia solanacearum ClpA/B-type chaperone protein rsp0749 or rs01959 SWALL:Q8XRT2 (EMBL:AL646080) (905 aa) fasta scores: E(): 4.1e-66, 47.08% id in 962 aa; Clp-type ATPase chaperone protein 2049829 3096694 BPSS1502 Burkholderia pseudomallei K96243 Clp-type ATPase chaperone protein YP_111509.1 2046791 D 272560 CDS YP_111510.1 53722525 3095009 2049856..2052879 1 NC_006351.1 Similar over its N-terminal half to Pseudomonas aeruginosa hypothetical protein Pa5266 SWALL:Q9HTT3 (EMBL:AE004939) (691 aa) fasta scores: E(): 3.8e-32, 30.61% id in 503 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 1.5e-31, 26.39% id in 629 aa; hypothetical protein 2052879 3095009 BPSS1503 Burkholderia pseudomallei K96243 hypothetical protein YP_111510.1 2049856 D 272560 CDS YP_111511.1 53722526 3095587 2052905..2055547 1 NC_006351.1 Similar over its C-terminal region to Chlorobium tepidum pentapeptide repeat family protein ct1045 SWALL:AAM72278 (EMBL:AE012867) (549 aa) fasta scores: E(): 1.5e-08, 32.65% id in 346 aa, and to Caulobacter crescentus pentapeptide repeat family protein cc0587 SWALL:Q9AAL0 (EMBL:AE005733) (371 aa) fasta scores: E(): 2.2e-08, 32.08% id in 321 aa; hypothetical protein 2055547 3095587 BPSS1504 Burkholderia pseudomallei K96243 hypothetical protein YP_111511.1 2052905 D 272560 CDS YP_111512.1 53722527 3095588 2055565..2056629 1 NC_006351.1 N-terminal region is weakly similar to Synechocystis sp. hypothetical protein SLR1819 SWALL:YI19_SYNY3 (SWALL:P73709) (331 aa) fasta scores: E(): 1.1e-15, 28.8% id in 309 aa; hypothetical protein 2056629 3095588 BPSS1505 Burkholderia pseudomallei K96243 hypothetical protein YP_111512.1 2055565 D 272560 CDS YP_111513.1 53722528 3094883 2056626..2057378 1 NC_006351.1 Weakly similar to Rhizobium loti hypothetical protein Mlr1970 SWALL:Q98JF2 (EMBL:AP002998) (211 aa) fasta scores: E(): 5.6, 29.57% id in 186 aa; hypothetical protein 2057378 3094883 BPSS1506 Burkholderia pseudomallei K96243 hypothetical protein YP_111513.1 2056626 D 272560 CDS YP_111514.1 53722529 3096369 2057407..2057799 1 NC_006351.1 Weakly similar to Yersinia pestis hypothetical protein ypo0511a or y3662 SWALL:Q8ZII6 (EMBL:AJ414143) (121 aa) fasta scores: E(): 0.57, 28.84% id in 104 aa; hypothetical protein 2057799 3096369 BPSS1507 Burkholderia pseudomallei K96243 hypothetical protein YP_111514.1 2057407 D 272560 CDS YP_111515.1 53722530 3096370 2057929..2058606 1 NC_006351.1 Weakly similar to Ralstonia solanacearum transmembrane protein rsp0741 or rs01967 SWALL:Q8XRU0 (EMBL:AL646080) (193 aa) fasta scores: E(): 1.8, 25.52% id in 192 aa; hypothetical protein 2058606 3096370 BPSS1508 Burkholderia pseudomallei K96243 hypothetical protein YP_111515.1 2057929 D 272560 CDS YP_111516.1 53722531 3095047 2058639..2060036 1 NC_006351.1 Weakly similar to Salmonella typhi hypothetical protein Sty0304 SWALL:Q8Z966 (EMBL:AL627266) (447 aa) fasta scores: E(): 9.9e-06, 26.31% id in 475 aa; hypothetical protein 2060036 3095047 BPSS1509 Burkholderia pseudomallei K96243 hypothetical protein YP_111516.1 2058639 D 272560 CDS YP_111517.1 53722532 3096207 2060051..2060698 1 NC_006351.1 Similar over its N-terminal region to Ralstonia solanacearum probable transmembrane protein rsp0739 or rs01969 SWALL:Q8XRU2 (EMBL:AL646080) (263 aa) fasta scores: E(): 1.3e-06, 34.83% id in 155 aa, and to Yersinia pestis membrane protein ypo1468 or ypo0975 or y2703 or y3366 SWALL:Q8XF18 (EMBL:AJ414148) (228 aa) fasta scores: E(): 0.047, 28.94% id in 190 aa; hypothetical protein 2060698 3096207 BPSS1510 Burkholderia pseudomallei K96243 hypothetical protein YP_111517.1 2060051 D 272560 CDS YP_111518.1 53722533 3096208 2060710..2064669 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0763 or rs01945 SWALL:Q8XRR8 (EMBL:AL646080) (1313 aa) fasta scores: E(): 4.4e-17, 25.47% id in 1162 aa, and to Rhizobium leguminosarum ImpL SWALL:Q93EC2 (EMBL:AF361470) (1158 aa) fasta scores: E(): 3.1e-11, 24.82% id in 1003 aa; hypothetical protein 2064669 3096208 BPSS1511 Burkholderia pseudomallei K96243 hypothetical protein YP_111518.1 2060710 D 272560 CDS YP_111519.1 53722534 3096758 2065185..2066609 1 NC_006351.1 hypothetical protein 2066609 3096758 BPSS1512 Burkholderia pseudomallei K96243 hypothetical protein YP_111519.1 2065185 D 272560 CDS YP_111520.1 53722535 3096713 2066773..2067066 1 NC_006351.1 No significant database matches. Doubtful CDS.; hypothetical protein 2067066 3096713 BPSS1513 Burkholderia pseudomallei K96243 hypothetical protein YP_111520.1 2066773 D 272560 CDS YP_111521.1 53722536 3095368 2067071..2067703 1 NC_006351.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2067703 folE 3095368 folE Burkholderia pseudomallei K96243 GTP cyclohydrolase I YP_111521.1 2067071 D 272560 CDS YP_111522.1 53722537 3096078 complement(2068764..2070173) 1 NC_006351.1 hypothetical protein 2070173 3096078 BPSS1516 Burkholderia pseudomallei K96243 hypothetical protein YP_111522.1 2068764 R 272560 CDS YP_111523.1 53722538 3095899 complement(2070325..2070768) 1 NC_006351.1 hypothetical protein 2070768 3095899 BPSS1517 Burkholderia pseudomallei K96243 hypothetical protein YP_111523.1 2070325 R 272560 CDS YP_111524.1 53722539 3095900 complement(2070853..2071140) 1 NC_006351.1 Similar to N-terminal region of Xanthomonas oryzae transposase SWALL:Q93LQ4 (EMBL:AY035401) (344 aa) fasta scores: E(): 1.5e-07, 50% id in 66 aa; transposase 2071140 3095900 BPSS1518 Burkholderia pseudomallei K96243 transposase YP_111524.1 2070853 R 272560 CDS YP_111525.1 53722540 3095264 2071442..2072041 1 NC_006351.1 Similar to Burkholderia cepacia transposase for insertion sequence element IS402 SWALL:T402_BURCE (SWALL:P24536) (211 aa) fasta scores: E(): 1.4e-21, 55.63% id in 133 aa, and to Pseudomonas glumae transposase SWALL:Q9KVZ9 (EMBL:AB046460) (265 aa) fasta scores: E(): 7.9e-20, 52.71% id in 129 aa; transposase 2072041 3095264 BPSS1519 Burkholderia pseudomallei K96243 transposase YP_111525.1 2071442 D 272560 CDS YP_111526.1 53722541 3095464 complement(2072125..2073186) 1 NC_006351.1 Weakly similar to Streptomyces coelicolor regulatory protein sco5017 or sck15.19 SWALL:Q9KY85 (EMBL:AL939122) (365 aa) fasta scores: E(): 4e-11, 28.89% id in 353 aa, and Pseudomonas aeruginosa probable transcriptional regulator pa4094 SWALL:Q9HWT4 (EMBL:AE004825) (319 aa) fasta scores: E(): 2e-09, 26.93% id in 323 aa; AraC family transcriptional regulator 2073186 3095464 BPSS1520 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111526.1 2072125 R 272560 CDS YP_111527.1 53722542 3095465 complement(2073665..2074108) 1 NC_006351.1 Weakly similar to Myxococcus xanthus sigma-54 dependent transcriptional activator 221_mxA SWALL:Q50874 (EMBL:U49156) (140 aa) fasta scores: E(): 3.3, 27.88% id in 104 aa; hypothetical protein 2074108 3095465 BPSS1521 Burkholderia pseudomallei K96243 hypothetical protein YP_111527.1 2073665 R 272560 CDS YP_111528.1 53722543 3096722 complement(2074346..2075017) 1 NC_006351.1 Similar to Pseudomonas viridiflava response regulator GacA or RepB SWALL:GACA_PSEVI (SWALL:P95582) (214 aa) fasta scores: E(): 3.6e-17, 35.21% id in 213 aa, and to Yersinia pestis two-component response regulator ypo0255 or y0512 SWALL:Q8ZJ69 (EMBL:AJ414141) (210 aa) fasta scores: E(): 9e-22, 40.58% id in 207 aa; two-component response regulator 2075017 3096722 BPSS1522 Burkholderia pseudomallei K96243 two-component response regulator YP_111528.1 2074346 R 272560 CDS YP_111529.1 53722544 3096082 complement(2075253..2075708) 1 NC_006351.1 Similar to Salmonella typhimurium SicP SWALL:O85300 (EMBL:AF060857) (116 aa) fasta scores: E(): 7.2e-06, 25.89% id in 112 aa, and to Escherichia coli O111:H- Tir chaperone CesT SWALL:CEST_ECO11 (SWALL:O30999) (156 aa) fasta scores: E(): 0.38, 26.11% id in 134 aa; chaperone 2075708 bicP 3096082 bicP Burkholderia pseudomallei K96243 chaperone YP_111529.1 2075253 R 272560 CDS YP_111530.1 53722545 3096275 complement(2075849..2077387) 1 NC_006351.1 Similar to Shigella flexneri intercellular spread protein icsb or cp0132 SWALL:ICSB_SHIFL (SWALL:P33546) (494 aa) fasta scores: E(): 1.6e-32, 31.7% id in 388 aa; intercellular spread protein 2077387 bopA 3096275 bopA Burkholderia pseudomallei K96243 intercellular spread protein YP_111530.1 2075849 R 272560 CDS YP_111531.1 53722546 3096393 2078020..2078805 1 NC_006351.1 Similar to Salmonella enterica subsp. VII G-nucleotide exchange factor SopE SWALL:Q8VSR1 (EMBL:AF378113) (240 aa) fasta scores: E(): 8.6e-08, 28.77% id in 212 aa, and to Salmonella gallinarum G-nucleotide exchange factor SopE SWALL:Q8VSQ6 (EMBL:AF380340) (240 aa) fasta scores: E(): 1.5e-07, 24.56% id in 228 aa; G-nucleotide exchange factor 2078805 bopE 3096393 bopE Burkholderia pseudomallei K96243 G-nucleotide exchange factor YP_111531.1 2078020 D 272560 CDS YP_111532.1 53722547 3097079 complement(2079259..2079822) 1 NC_006351.1 Similar to Salmonella typhi invasion protein IagB or sty3000 SWALL:IAGB_SALTI (SWALL:P43018) (160 aa) fasta scores: E(): 2e-11, 42.27% id in 123 aa, and to Burkholderia pseudomallei hypothetical 18.2 kDa protein SWALL:Q9ZF87 (EMBL:AF110185) (161 aa) fasta scores: E(): 5.2e-21, 47.68% id in 151 aa; invasion protein 2079822 bapC 3097079 bapC Burkholderia pseudomallei K96243 invasion protein YP_111532.1 2079259 R 272560 CDS YP_111533.1 53722548 3097128 complement(2079819..2080100) 1 NC_006351.1 Similar to Saccharopolyspora erythraea acyl carrier protein AcpP SWALL:ACP_SACER (SWALL:P11830) (95 aa) fasta scores: E(): 0.0043, 36.84% id in 76 aa, and to Thermotoga maritima acyl carrier protein AcpP or tm0662 SWALL:Q9WZD0 (EMBL:AE001739) (81 aa) fasta scores: E(): 9.7e-05, 31.88% id in 69 aa; acyl carrier protein 2080100 bapB 3097128 bapB Burkholderia pseudomallei K96243 acyl carrier protein YP_111533.1 2079819 R 272560 CDS YP_111534.1 53722549 3096284 complement(2080097..2082739) 1 NC_006351.1 hypothetical protein 2082739 3096284 BPSS1528 Burkholderia pseudomallei K96243 hypothetical protein YP_111534.1 2080097 R 272560 CDS YP_111535.1 53722550 3096115 complement(2082841..2083773) 1 NC_006351.1 Similar over the C-terminal region to Shigella flexneri 36 kDa membrane antigen IpaD or cp0126 SWALL:AAK18444 (EMBL:J04117) (332 aa) fasta scores: E(): 2e-09, 36.81% id in 182 aa, and to Shigella dysenteriae 37 kDa membrane antigen IpaD SWALL:IPAD_SHIDY (SWALL:Q03947) (332 aa) fasta scores: E(): 8.7e-09, 36.36% id in 187 aa; membrane antigen 2083773 bipD 3096115 bipD Burkholderia pseudomallei K96243 membrane antigen YP_111535.1 2082841 R 272560 CDS YP_111536.1 53722551 3096413 complement(2083835..2084125) 1 NC_006351.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0029 or rs02004 SWALL:Q8XTS5 (EMBL:AL646076) (95 aa) fasta scores: E(): 3.7e-14, 58.33% id in 96 aa, and to Citrobacter rodentium lee-encoded regulator SWALL:Q93FM7 (EMBL:AF311901) (129 aa) fasta scores: E(): 0.0036, 26% id in 100 aa; HNS-like regulatory protein 2084125 bprA 3096413 bprA Burkholderia pseudomallei K96243 HNS-like regulatory protein YP_111536.1 2083835 R 272560 CDS YP_111537.1 53722552 3096209 complement(2084259..2085518) 1 NC_006351.1 Weakly similar to Bordetella bronchiseptica outer protein D BopD SWALL:Q9REZ6 (EMBL:AF207788) (313 aa) fasta scores: E(): 1.4, 25.7% id in 284 aa, and to Salmonella typhi SipC protein or sty3007 SWALL:Q56135 (EMBL:X82670) (409 aa) fasta scores: E(): 0.0039, 24.21% id in 285 aa; cell invasion protein 2085518 bipC 3096209 bipC Burkholderia pseudomallei K96243 cell invasion protein YP_111537.1 2084259 R 272560 CDS YP_111538.1 53722553 3096083 complement(2085560..2087422) 1 NC_006351.1 Similar to Shigella flexneri 62 kDa membrane antigen IpaB or cp0128 SWALL:CAC05803 (EMBL:J04117) (580 aa) fasta scores: E(): 2.1e-29, 29.81% id in 597 aa, and to Salmonella typhimurium, and Salmonella dublin SipB or stm2885 SWALL:Q56019 (EMBL:U25631) (593 aa) fasta scores: E(): 5.8e-41, 35.54% id in 543 aa; cell invasion protein 2087422 bipB 3096083 bipB Burkholderia pseudomallei K96243 cell invasion protein YP_111538.1 2085560 R 272560 CDS YP_111539.1 53722554 3096042 complement(2087441..2087956) 1 NC_006351.1 Similar to Salmonella typhimurium, Salmonella typhi, and Salmonella dublin surface presentation of antigens protein SpaT or SicA or stm2886 or sty3009 SWALL:SPAT_SALTY (SWALL:P40703) (165 aa) fasta scores: E(): 4.2e-37, 61.9% id in 147 aa, and to Shigella flexneri, and Shigella dysenteriae IppI or IpgC or cp0129 SWALL:IPPI_SHIFL (SWALL:P18008) (155 aa) fasta scores: E(): 2.4e-33, 50.32% id in 153 aa; surface presentation of antigens protein 2087956 bicA 3096042 bicA Burkholderia pseudomallei K96243 surface presentation of antigens protein YP_111539.1 2087441 R 272560 CDS YP_111540.1 53722555 3096627 complement(2088082..2089317) 1 NC_006351.1 Required for surface presentation of invasion plasmid antigens; required for invasion and for secretion of the three ipa proteins; surface presentation of antigens protein SpaS 2089317 bsaZ 3096627 bsaZ Burkholderia pseudomallei K96243 surface presentation of antigens protein SpaS YP_111540.1 2088082 R 272560 CDS YP_111541.1 53722556 3096690 complement(2089321..2090076) 1 NC_006351.1 Similar to Salmonella typhimurium surface presentation of antigens protein SpaR or stm2888 SWALL:SPAR_SALTY (SWALL:P40701) (263 aa) fasta scores: E(): 2.9e-32, 43.61% id in 227 aa, and to Yersinia enterocolitica YsaT SWALL:Q9KKH0 (EMBL:AF005744) (266 aa) fasta scores: E(): 3.3e-36, 46% id in 250 aa; surface presentation of antigens protein 2090076 bsaY 3096690 bsaY Burkholderia pseudomallei K96243 surface presentation of antigens protein YP_111541.1 2089321 R 272560 CDS YP_111542.1 53722557 3096689 complement(2090110..2090364) 1 NC_006351.1 Similar to Salmonella typhimurium, Salmonella typhi, Salmonella dublin, Salmonella enteritidis, Salmonella gallinarum, Salmonella senftenberg, and Salmonella typhisuis surface presentation of antigens protein SpaQ or stm2889 or sty3012 SWALL:SPAQ_SALTY (SWALL:P40704) (86 aa) fasta scores: E(): 3.7e-15, 54.21% id in 83 aa, and to Yersinia enterocolitica YsaS SWALL:Q93NK6 (EMBL:AF369954) (89 aa) fasta scores: E(): 7.6e-18, 65.06% id in 83 aa; surface presentation of antigens protein 2090364 bsaX 3096689 bsaX Burkholderia pseudomallei K96243 surface presentation of antigens protein YP_111542.1 2090110 R 272560 CDS YP_111543.1 53722558 3096471 complement(2090401..2091081) 1 NC_006351.1 part of a type III secretory system probably involved in invasion into eukaryotic cells; surface presentation of antigens protein SpaP 2091081 spaP 3096471 spaP Burkholderia pseudomallei K96243 surface presentation of antigens protein SpaP YP_111543.1 2090401 R 272560 CDS YP_111544.1 53722559 3096529 complement(2091071..2092042) 1 NC_006351.1 Similar to Salmonella typhimurium SpaO SWALL:Q57524 (EMBL:U29358) (303 aa) fasta scores: E(): 0.045, 28.34% id in 314 aa; surface presentation of antigens protein 2092042 bsaV 3096529 bsaV Burkholderia pseudomallei K96243 surface presentation of antigens protein YP_111544.1 2091071 R 272560 CDS YP_111545.1 53722560 3096285 complement(2092039..2093316) 1 NC_006351.1 No significant database matches to the full length protein; hypothetical protein 2093316 3096285 BPSS1539 Burkholderia pseudomallei K96243 hypothetical protein YP_111545.1 2092039 R 272560 CDS YP_111546.1 53722561 3096528 complement(2093294..2093758) 1 NC_006351.1 Weakly similar to Salmonella enterica SpaM SWALL:Q54062 (EMBL:U43314) (147 aa) fasta scores: E(): 3.7, 24.8% id in 125 aa; surface presentation of antigens protein 2093758 bsaT 3096528 bsaT Burkholderia pseudomallei K96243 surface presentation of antigens protein YP_111546.1 2093294 R 272560 CDS YP_111547.1 53722562 3096673 complement(2093755..2095062) 1 NC_006351.1 Invasion protein InvC; necessary for efficient entry of S.typhimurium into cultured epithelial cells. Probable catalytic subunit of a protein translocase; ATP synthase SpaL 2095062 bsaS 3096673 bsaS Burkholderia pseudomallei K96243 ATP synthase SpaL YP_111547.1 2093755 R 272560 CDS YP_111548.1 53722563 3096685 complement(2095059..2095466) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella typhi surface presentation of antigens protein SpaK or InvB or stm2895 or sty3018 SWALL:SPAK_SALTY (SWALL:P39443) (135 aa) fasta scores: E(): 4e-06, 27.61% id in 134 aa, and to Shigella sonnei surface presentation of antigens protein spak spak or spa15 SWALL:SPAK_SHISO (SWALL:Q55296) (133 aa) fasta scores: E(): 1.9e-05, 26.51% id in 132 aa; surface presentation of antigens protein 2095466 bsaR 3096685 bsaR Burkholderia pseudomallei K96243 surface presentation of antigens protein YP_111548.1 2095059 R 272560 CDS YP_111549.1 53722564 3096684 complement(2095478..2097550) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella typhi invasion protein InvA or stm2896 or sty3019 SWALL:INVA_SALTY (SWALL:P35657) (685 aa) fasta scores: E(): 7.7e-135, 56.05% id in 694 aa, and to Shigella flexneri, and Shigella sonnei MxiA protein or VirH or cp0147 SWALL:MXIA_SHIFL (SWALL:P35533) (686 aa) fasta scores: E(): 5.3e-133, 55.57% id in 691 aa; Type III secretion system protein 2097550 bsaQ 3096684 bsaQ Burkholderia pseudomallei K96243 Type III secretion system protein YP_111549.1 2095478 R 272560 CDS YP_111550.1 53722565 3096728 complement(2097586..2098692) 1 NC_006351.1 Similar to Salmonella typhimurium invasion protein InvE or stm2897 SWALL:INVE_SALTY (SWALL:P35671) (372 aa) fasta scores: E(): 3.8e-24, 33.81% id in 346 aa; Type III secretion system protein 2098692 bsaP 3096728 bsaP Burkholderia pseudomallei K96243 Type III secretion system protein YP_111550.1 2097586 R 272560 CDS YP_111551.1 53722566 3096571 complement(2098689..2100551) 1 NC_006351.1 Similar to Salmonella typhimurium InvG protein precursor InvG or stm2898 SWALL:INVG_SALTY (SWALL:P35672) (562 aa) fasta scores: E(): 1.8e-22, 44.5% id in 519 aa, and to Escherichia coli O157:H7 type III secretion apparatus protein z4197 or ecs3733 SWALL:Q8X6D6 (EMBL:AE005515) (567 aa) fasta scores: E(): 4e-36, 40.81% id in 517 aa; Type III secretion system protein 2100551 bsaO 3096571 bsaO Burkholderia pseudomallei K96243 Type III secretion system protein YP_111551.1 2098689 R 272560 CDS YP_111552.1 53722567 3096570 complement(2100565..2101206) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella typhi invasion protein InvF or stm2899 or sty3022 SWALL:INVF_SALTY (SWALL:P39437) (216 aa) fasta scores: E(): 3.5e-18, 36.01% id in 211 aa, and to Escherichia coli O157:H7 regulatory protein for type III secretion apparatus z4198 or ecs3734 SWALL:Q8X6D3 (EMBL:AE005515) (249 aa) fasta scores: E(): 4.4e-15, 36.84% id in 190 aa; AraC family transcriptional regulator 2101206 bsaN 3096570 bsaN Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111552.1 2100565 R 272560 CDS YP_111553.1 53722568 3096220 2101717..2103003 1 NC_006351.1 Similar to Salmonella typhimurium PrgH protein or stm2874 SWALL:PRGH_SALTY (SWALL:P41783) (392 aa) fasta scores: E(): 9.1e-12, 23.74% id in 417 aa, and to Salmonella typhi pathogenicity 1 island effector protein PrgH or sty2995 SWALL:Q8Z499 (EMBL:AL627276) (392 aa) fasta scores: E(): 7e-12, 24.46% id in 417 aa; type III secretion system protein 2103003 3096220 BPSS1547 Burkholderia pseudomallei K96243 type III secretion system protein YP_111553.1 2101717 D 272560 CDS YP_111554.1 53722569 3095549 2103000..2103269 1 NC_006351.1 Similar to Salmonella typhimurium PrgI protein or stm2873 SWALL:PRGI_SALTY (SWALL:P41784) (80 aa) fasta scores: E(): 4.2e-12, 55.26% id in 76 aa, and to Shigella flexneri, and Shigella sonnei MxiH protein or cp0137 SWALL:MXIH_SHIFL (SWALL:Q06079) (83 aa) fasta scores: E(): 3.1e-10, 49.35% id in 77 aa; Type III secretion system protein 2103269 3095549 BPSS1548 Burkholderia pseudomallei K96243 Type III secretion system protein YP_111554.1 2103000 D 272560 CDS YP_111555.1 53722570 3095550 2103329..2103631 1 NC_006351.1 Similar to Shigella flexneri, and Shigella sonnei MxiI protein or cp0138 SWALL:MXII_SHIFL (SWALL:Q06080) (97 aa) fasta scores: E(): 0.00022, 37.37% id in 99 aa, and to Salmonella typhimurium PrgJ protein or stm2872 SWALL:PRGJ_SALTY (SWALL:P41785) (101 aa) fasta scores: E(): 0.00075, 37.83% id in 74 aa; Type III secretion system protein 2103631 3095550 BPSS1549 Burkholderia pseudomallei K96243 Type III secretion system protein YP_111555.1 2103329 D 272560 CDS YP_111556.1 53722571 3096770 2103636..2104583 1 NC_006351.1 Similar to Salmonella typhimurium lipoprotein PrgK precursor or stm2871 SWALL:PRGK_SALTY (SWALL:P41786) (252 aa) fasta scores: E(): 1.2e-25, 42.43% id in 238 aa, and to Shigella flexneri lipoprotein MxiJ precursor or cp0139 SWALL:MXIJ_SHIFL (SWALL:Q06081) (241 aa) fasta scores: E(): 1.1e-23, 47.89% id in 190 aa; Type III secretion system protein 2104583 3096770 BPSS1550 Burkholderia pseudomallei K96243 Type III secretion system protein YP_111556.1 2103636 D 272560 CDS YP_111557.1 53722572 3096404 2104580..2105167 1 NC_006351.1 Similar to Salmonella typhimurium oxygen-regulated invasion protein OrgA or stm2870 SWALL:ORGA_SALTY (SWALL:P58653) (199 aa) fasta scores: E(): 4.2e-08, 31.87% id in 160 aa; Type III secretion system protein 2105167 3096404 BPSS1551 Burkholderia pseudomallei K96243 Type III secretion system protein YP_111557.1 2104580 D 272560 CDS YP_111558.1 53722573 3096405 2105136..2105918 1 NC_006351.1 Similar to Salmonella typhimurium oxygen-regulated invasion protein OrgB or stm2869 SWALL:ORGB_SALTY (SWALL:P58654) (226 aa) fasta scores: E(): 2.9e-07, 27.4% id in 208 aa; Type III secretion system protein 2105918 3096405 BPSS1552 Burkholderia pseudomallei K96243 Type III secretion system protein YP_111558.1 2105136 D 272560 CDS YP_111559.1 53722574 3095781 2106912..2107883 1 NC_006351.1 No significant similarity over the entire length of the protein. Similar to Yersinia enterocolitica orf1 SWALL:Q9KKJ0 (EMBL:AF005744) (161 aa) fasta scores: E(): 0.0001, 39.09% id in 110 aa, and to Salmonella typhi possible transmembrane regulator sty0377 SWALL:Q8Z922 (EMBL:AL627266) (247 aa) fasta scores: E(): 0.03, 30.2% id in 149 aa; hypothetical protein 2107883 3095781 BPSS1553 Burkholderia pseudomallei K96243 hypothetical protein YP_111559.1 2106912 D 272560 CDS YP_111560.1 53722575 3095650 2107895..2108335 1 NC_006351.1 hypothetical protein 2108335 3095650 BPSS1554 Burkholderia pseudomallei K96243 hypothetical protein YP_111560.1 2107895 D 272560 CDS YP_111561.1 53722576 3095651 2109379..2111076 1 NC_006351.1 Similar to Streptomyces coelicolor metalloproteinase sco2474 or sc7a8.13 SWALL:Q9L2E5 (EMBL:AL939112) (547 aa) fasta scores: E(): 3.1e-52, 41.6% id in 572 aa, and to Xanthomonas axonopodis metalloproteinase xac0465 SWALL:AAM35356 (EMBL:AE011673) (540 aa) fasta scores: E(): 1.1e-61, 45.75% id in 518 aa; peptidase 2111076 3095651 BPSS1555 Burkholderia pseudomallei K96243 peptidase YP_111561.1 2109379 D 272560 CDS YP_111562.1 53722577 3095003 complement(2112198..2112686) 1 NC_006351.1 Similar to Ralstonia oxalatica transcription regulator SWALL:CAD61124 (EMBL:AJ536756) (164 aa) fasta scores: E(): 1.4e-07, 34.17% id in 158 aa, and to Bacillus subtilis YetL protein yetL SWALL:O31541 (EMBL:Z99107) (167 aa) fasta scores: E(): 2e-07, 30.9% id in 165 aa; MarR family transcriptional regulator 2112686 3095003 BPSS1556 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_111562.1 2112198 R 272560 CDS YP_111563.1 53722578 3096288 2113012..2113470 1 NC_006351.1 Similar to Caulobacter crescentus lactoylglutathione lyase, cc1933 SWALL:Q9A6Z3 (EMBL:AE005867) (139 aa) fasta scores: E(): 0.00013, 31.61% id in 136 aa, and to Arabidopsis thaliana f9l1.33 protein f9l1.33 or at1g15380 SWALL:Q9XI31 (EMBL:AC007591) (174 aa) fasta scores: E(): 3.5e-05, 28.35% id in 134 aa; glyoxalase 2113470 3096288 BPSS1557 Burkholderia pseudomallei K96243 glyoxalase YP_111563.1 2113012 D 272560 CDS YP_111564.1 53722579 3094946 2114037..2115356 1 NC_006351.1 Similar to Escherichia coli alpha-ketoglutarate permease KgtP or WitA or b2587 SWALL:KGTP_ECOLI (SWALL:P17448) (432 aa) fasta scores: E(): 2.6e-80, 52.82% id in 407 aa, and to Ralstonia solanacearum alpha-ketoglutarate permease transmembrane protein KgtP2 or rsp0007 or rs01979 SWALL:Q8XTU7 (EMBL:AL646076) (447 aa) fasta scores: E(): 3.7e-108, 66.82% id in 416 aa; alpha-ketoglutarate permease 2115356 kgtP 3094946 kgtP Burkholderia pseudomallei K96243 alpha-ketoglutarate permease YP_111564.1 2114037 D 272560 CDS YP_111565.1 53722580 3096289 complement(2115742..2116629) 1 NC_006351.1 Similar to Yersinia pestis similar to hypothetical transcriptional regulator ypo1934 or y2377 SWALL:Q9ZC44 (EMBL:AL031866) (320 aa) fasta scores: E(): 5.2e-58, 55.67% id in 291 aa; LysR family transcriptional regulator 2116629 3096289 BPSS1559 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111565.1 2115742 R 272560 CDS YP_111566.1 53722581 3095127 2116730..2117953 1 NC_006351.1 Similar to Pseudomonas putida L(+)-mandelate dehydrogenase MdlB SWALL:MDLB_PSEPU (SWALL:P20932) (393 aa) fasta scores: E(): 5.7e-46, 38.36% id in 378 aa, and to Brucella melitensis L-lactate dehydrogenase bmeii0377 SWALL:Q8YD00 (EMBL:AE009675) (382 aa) fasta scores: E(): 4.5e-42, 35.67% id in 370 aa. CDS is extended at the N-terminus in comparison to orthologues.; L(+)-mandelate dehydrogenase 2117953 mdlB 3095127 mdlB Burkholderia pseudomallei K96243 L(+)-mandelate dehydrogenase YP_111566.1 2116730 D 272560 CDS YP_111567.1 53722582 3096104 complement(2118077..2119741) 1 NC_006351.1 Similar to Ralstonia solanacearum probable carboxypeptidase rsc1003 or rs04289 SWALL:Q8Y0P0 (EMBL:AL646062) (543 aa) fasta scores: E(): 2.7e-111, 56.51% id in 545 aa, and to Deinococcus radiodurans carboxypeptidase-related protein dr0964 SWALL:Q9RVQ8 (EMBL:AE001948) (500 aa) fasta scores: E(): 2.7e-33, 34.62% id in 517 aa; carboxypeptidase 2119741 3096104 BPSS1561 Burkholderia pseudomallei K96243 carboxypeptidase YP_111567.1 2118077 R 272560 CDS YP_111568.1 53722583 3097003 complement(2120444..2122033) 1 NC_006351.1 Similar to Bacillus subtilis kumamolysin kumA SWALL:Q8RR56 (EMBL:AB070740) (572 aa) fasta scores: E(): 6e-86, 50.64% id in 541 aa, and to Pseudomonas sp. pseudomonapepsin precursor Pcp SWALL:PICP_PSESR (SWALL:P42790) (587 aa) fasta scores: E(): 2.2e-29, 31.64% id in 534 aa; kumamolisin 2122033 3097003 BPSS1562 Burkholderia pseudomallei K96243 kumamolisin YP_111568.1 2120444 R 272560 CDS YP_111569.1 53722584 3097004 complement(2122464..2123090) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa4507 pa4507 SWALL:Q9HVR4 (EMBL:AE004864) (210 aa) fasta scores: E(): 1.7e-31, 47.76% id in 201 aa, and to Ralstonia solanacearum probable transport transmembrane protein rsc0418 or rs03386 SWALL:Q8Y2B8 (EMBL:AL646059) (206 aa) fasta scores: E(): 5.4e-18, 35.78% id in 204 aa; LysE family translocator 2123090 3097004 BPSS1563 Burkholderia pseudomallei K96243 LysE family translocator YP_111569.1 2122464 R 272560 CDS YP_111570.1 53722585 3095576 2123224..2123688 1 NC_006351.1 Similar to Pseudomonas putida lrp-family transcriptional regulators MdeR SWALL:O33467 (EMBL:D89015) (159 aa) fasta scores: E(): 2.2e-26, 49.33% id in 150 aa, and to Pseudomonas putida transcriptional regulator, AsnC-family pp1307 SWALL:AAN66931 (EMBL:AE016778) (159 aa) fasta scores: E(): 1.4e-25, 48.66% id in 150 aa; transcription regulator AsnC 2123688 3095576 BPSS1564 Burkholderia pseudomallei K96243 transcription regulator AsnC YP_111570.1 2123224 D 272560 CDS YP_111571.1 53722586 3094891 2124036..2124440 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp0181 or rs04693 SWALL:Q8XTD2 (EMBL:AL646077) (134 aa) fasta scores: E(): 6.4e-29, 57.81% id in 128 aa, and to Rhizobium meliloti hypothetical protein rb1133 or smb21007 SWALL:Q92UJ5 (EMBL:AL603646) (139 aa) fasta scores: E(): 5.6e-14, 37.58% id in 141 aa; hypothetical protein 2124440 3094891 BPSS1565 Burkholderia pseudomallei K96243 hypothetical protein YP_111571.1 2124036 D 272560 CDS YP_111572.1 53722587 3094892 2124793..2126379 1 NC_006351.1 Similar to Escherichia coli low-affinity inorganic phosphate transporter 1 PitA or Pit or b3493 or c4291 or z4893 or ecs4365 SWALL:PITA_ECOLI (SWALL:P37308) (499 aa) fasta scores: E(): 8.9e-26, 43.53% id in 503 aa, and to Pseudomonas aeruginosa probable phosphate transporter pa0450 SWALL:Q9I668 (EMBL:AE004482) (540 aa) fasta scores: E(): 6.9e-120, 64.97% id in 511 aa; phosphate transporter 2126379 3094892 BPSS1566 Burkholderia pseudomallei K96243 phosphate transporter YP_111572.1 2124793 D 272560 CDS YP_111573.1 53722588 3095655 2126529..2127311 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc2567 or rs00763 SWALL:Q8XWA7 (EMBL:AL646070) (250 aa) fasta scores: E(): 5.7e-70, 71.93% id in 228 aa, and to Rhizobium loti hypothetical protein Mlr1862 SWALL:Q98JN4 (EMBL:AP002998) (247 aa) fasta scores: E(): 3.1e-62, 60.56% id in 246 aa; hypothetical protein 2127311 3095655 BPSS1567 Burkholderia pseudomallei K96243 hypothetical protein YP_111573.1 2126529 D 272560 CDS YP_111574.1 53722589 3095342 2127907..2129514 1 NC_006351.1 Similar to Rhizobium meliloti long-chain fatty-acid-CoA ligase rb1358 or smb20650 SWALL:Q92TY5 (EMBL:AL603646) (515 aa) fasta scores: E(): 9.6e-51, 39.27% id in 522 aa, and to Rhizobium loti long chain acyl-CoA synthetase mll6742 SWALL:Q988H2 (EMBL:AP003010) (511 aa) fasta scores: E(): 1.2e-46, 37.35% id in 522 aa; AMP-binding protein 2129514 3095342 BPSS1568 Burkholderia pseudomallei K96243 AMP-binding protein YP_111574.1 2127907 D 272560 CDS YP_111575.1 53722590 3095343 2130282..2130974 1 NC_006351.1 Similar to Pseudomonas aeruginosa PhzR or pa1898 SWALL:Q9RMS5 (EMBL:AF190630) (237 aa) fasta scores: E(): 6.4e-14, 34.5% id in 200 aa, and to Rhizobium sp. hypothetical transcriptional regulator Y4qH SWALL:Y4QH_RHISN (SWALL:P55629) (326 aa) fasta scores: E(): 9.8e-17, 35.71% id in 182 aa; N-acylhomoserine lactone-dependent regulatory protein 2130974 3095343 BPSS1569 Burkholderia pseudomallei K96243 N-acylhomoserine lactone-dependent regulatory protein YP_111575.1 2130282 D 272560 CDS YP_111576.1 53722591 3096892 2131287..2131895 1 NC_006351.1 Similar to Burkholderia multivorans N-acyl homoserine lactone synthase SWALL:Q93NN9 (EMBL:AF364058) (202 aa) fasta scores: E(): 4.5e-23, 43.97% id in 191 aa, and to Burkholderia cepacia N-acyl homoserine lactone synthase cepI SWALL:Q9AM52 (EMBL:AF330017) (202 aa) fasta scores: E(): 8.3e-23, 44.19% id in 181 aa; N-acylhomoserine lactone synthase 2131895 3096892 BPSS1570 Burkholderia pseudomallei K96243 N-acylhomoserine lactone synthase YP_111576.1 2131287 D 272560 CDS YP_111577.1 53722592 3095256 2132198..2133562 1 NC_006351.1 Similar to Deinococcus radiodurans NADH oxidase-related protein dr2333 SWALL:Q9RRZ6 (EMBL:AE002064) (403 aa) fasta scores: E(): 1.2e-72, 50.12% id in 405 aa, and to Pseudomonas fluorescens MupC SWALL:Q8RL71 (EMBL:AF318063) (431 aa) fasta scores: E(): 7.5e-76, 50.82% id in 425 aa; NADH oxidoreductase 2133562 3095256 BPSS1571 Burkholderia pseudomallei K96243 NADH oxidoreductase YP_111577.1 2132198 D 272560 CDS YP_111578.1 53722593 3096796 complement(2133908..2134765) 1 NC_006351.1 Similar to Escherichia coli taurine transport system permease TauC or SsiC or b0367 SWALL:TAUC_ECOLI (SWALL:Q47539) (275 aa) fasta scores: E(): 8e-53, 59.1% id in 247 aa, and to Pseudomonas putida ABC-type transporter membrane permease component TauC SWALL:BAC00966 (EMBL:AB086390) (279 aa) fasta scores: E(): 3.9e-56, 57.14% id in 273 aa; taurine ABC transporter permease 2134765 tauC 3096796 tauC Burkholderia pseudomallei K96243 taurine ABC transporter permease YP_111578.1 2133908 R 272560 CDS YP_111579.1 53722594 3096834 complement(2134762..2135544) 1 NC_006351.1 Similar to Escherichia coli taurine transport ATP-binding protein TauB or SsiB or b0366 SWALL:TAUB_ECOLI (SWALL:Q47538) (255 aa) fasta scores: E(): 1.6e-41, 52.19% id in 251 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC taurine transporter pa3937 SWALL:Q9HX79 (EMBL:AE004811) (263 aa) fasta scores: E(): 8.4e-49, 56.58% id in 258 aa; ATP-binding component of taurine ABC transporter 2135544 tauB 3096834 tauB Burkholderia pseudomallei K96243 ATP-binding component of taurine ABC transporter YP_111579.1 2134762 R 272560 CDS YP_111580.1 53722595 3096489 complement(2135565..2136575) 1 NC_006351.1 Similar to Escherichia coli taurine-binding periplasmic protein precursor TauA or SsiA or b0365 SWALL:TAUA_ECOLI (SWALL:Q47537) (320 aa) fasta scores: E(): 1.1e-51, 48.91% id in 323 aa, and to Pseudomonas aeruginosa probable periplasmic taurine-binding protein precursor pa3938 SWALL:Q9HX78 (EMBL:AE004811) (337 aa) fasta scores: E(): 6.5e-64, 55.45% id in 330 aa; periplasmic component of taurine ABC transporter 2136575 tauA 3096489 tauA Burkholderia pseudomallei K96243 periplasmic component of taurine ABC transporter YP_111580.1 2135565 R 272560 CDS YP_111581.1 53722596 3096797 2136848..2137681 1 NC_006351.1 catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers; taurine dioxygenase 2137681 tauD 3096797 tauD Burkholderia pseudomallei K96243 taurine dioxygenase YP_111581.1 2136848 D 272560 CDS YP_111582.1 53722597 3095257 complement(2138107..2139663) 1 NC_006351.1 Similar to Salmonella typhimurium, and Salmonella typhi inner membrane protein yhju or stm3624 or sty4176 or bcsG SWALL:Q8XFY5 (EMBL:AE008867) (559 aa) fasta scores: E(): 2.6e-50, 35.3% id in 541 aa, and to Escherichia coli hypothetical protein yhju yhju or b3538 SWALL:YHJU_ECOLI (SWALL:P37659) (559 aa) fasta scores: E(): 8.5e-51, 36.34% id in 542 aa; hypothetical protein 2139663 3095257 BPSS1576 Burkholderia pseudomallei K96243 hypothetical protein YP_111582.1 2138107 R 272560 CDS YP_111583.1 53722598 3096079 complement(2139697..2142237) 1 NC_006351.1 Similar to Escherichia coli O157:H7 cellulose synthase catalytic subunit [UDP-forming] BcsA or z4948 or ecs4413 SWALL:Q8X5L7 (EMBL:AE005579) (888 aa) fasta scores: E(): 1.6e-156, 48.61% id in 833 aa, and to Salmonella typhimurium cellulose synthase catalytic subunit [udp-forming] bcsa or stm3619 SWALL:Q93IN2 (EMBL:AJ315770) (874 aa) fasta scores: E(): 2.1e-156, 48.03% id in 816 aa; cellulose synthase catalytic subunit 2142237 bcsA 3096079 bcsA Burkholderia pseudomallei K96243 cellulose synthase catalytic subunit YP_111583.1 2139697 R 272560 CDS YP_111584.1 53722599 3096014 complement(2142234..2143097) 1 NC_006351.1 Similar to the C-terminal region of Pseudomonas fluorescens WssA SWALL:Q8RSZ2 (EMBL:AY074776) (344 aa) fasta scores: E(): 2.3e-10, 30.56% id in 265 aa. Full length CDS is similar to Chromobacterium violaceum hypothetical protein SWALL:Q7NUL8 (EMBL:AE016919) (252 aa) fasta scores: E(): 2.5e-06, 29.6% id in 277 aa; hypothetical protein 2143097 3096014 BPSS1578 Burkholderia pseudomallei K96243 hypothetical protein YP_111584.1 2142234 R 272560 CDS YP_111585.1 53722600 3094959 complement(2143094..2143294) 1 NC_006351.1 No significant database matches. Doubtful CDS; hypothetical protein 2143294 3094959 BPSS1578a Burkholderia pseudomallei K96243 hypothetical protein YP_111585.1 2143094 R 272560 CDS YP_111586.1 53722601 3094960 complement(2143303..2145534) 1 NC_006351.1 No significant database matches to the full length protein; hypothetical protein 2145534 3094960 BPSS1579 Burkholderia pseudomallei K96243 hypothetical protein YP_111586.1 2143303 R 272560 CDS YP_111587.1 53722602 3095970 complement(2145560..2150062) 1 NC_006351.1 Similar to Acetobacter xylinus cellulose synthase 2 operon protein C precursor BcsciI SWALL:Q9WX71 (EMBL:AB015803) (1307 aa) fasta scores: E(): 3.8e-38, 28.41% id in 1327 aa, and to Acetobacter xylinus cellulose synthase operon protein c precursor acsC SWALL:ACSC_ACEXY (SWALL:P37718) (1319 aa) fasta scores: E(): 1.5e-08, 27.26% id in 1346 aa; cellulose biosynthesis protein 2150062 3095970 BPSS1580 Burkholderia pseudomallei K96243 cellulose biosynthesis protein YP_111587.1 2145560 R 272560 CDS YP_111588.1 53722603 3096132 complement(2150059..2151579) 1 NC_006351.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase 2151579 bcsZ 3096132 bcsZ Burkholderia pseudomallei K96243 endo-1,4-D-glucanase YP_111588.1 2150059 R 272560 CDS YP_111589.1 53722604 3096080 complement(2151584..2153980) 1 NC_006351.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 2153980 bcsB 3096080 bcsB Burkholderia pseudomallei K96243 cellulose synthase regulator protein YP_111589.1 2151584 R 272560 CDS YP_111590.1 53722605 3096075 2154301..2154891 1 NC_006351.1 Weakly similar to Chromobacterium violaceum hypothetical protein CV0474 SWALL:Q7NPT2 (EMBL:AE016911) (184 aa) fasta scores: E(): 0.0084, 32.78% id in 183 aa. Doubtful CDS; hypothetical protein 2154891 3096075 BPSS1582a Burkholderia pseudomallei K96243 hypothetical protein YP_111590.1 2154301 D 272560 CDS YP_111591.1 53722606 3095011 2155047..2155451 1 NC_006351.1 N-terminal region is similar to Escherichia coli protein HipB or b1508 SWALL:HIPB_ECOLI (SWALL:P23873) (88 aa) fasta scores: E(): 0.16, 30% id in 80 aa, and Ralstonia solanacearum transcription regulator protein HipB or rsp1252 or rs03197 SWALL:Q8XQH3 (EMBL:AL646083) (88 aa) fasta scores: E(): 0.0018, 46.26% id in 67 aa; transcriptional regulator 2155451 hipB 3095011 hipB Burkholderia pseudomallei K96243 transcriptional regulator YP_111591.1 2155047 D 272560 CDS YP_111592.1 53722607 3095070 2155448..2156800 1 NC_006351.1 Similar to Escherichia coli protein HipA or b1507 SWALL:HIPA_ECOLI (SWALL:P23874) (440 aa) fasta scores: E(): 1.1e-53, 38.82% id in 443 aa, and to Ralstonia solanacearum HipA transcription regulator protein hipa or rsc1446 or rs03861 SWALL:Q8XZF5 (EMBL:AL646064) (445 aa) fasta scores: E(): 9.3e-87, 52.82% id in 443 aa; regulatory protein 2156800 hipA 3095070 hipA Burkholderia pseudomallei K96243 regulatory protein YP_111592.1 2155448 D 272560 CDS YP_111593.1 53722608 3096076 complement(2156968..2157420) 1 NC_006351.1 hypothetical protein 2157420 3096076 BPSS1585 Burkholderia pseudomallei K96243 hypothetical protein YP_111593.1 2156968 R 272560 CDS YP_111594.1 53722609 3094920 complement(2157837..2158751) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1145 SWALL:Q9I4J0 (EMBL:AE004544) (300 aa) fasta scores: E(): 7.1e-44, 41.41% id in 297 aa, and to Rhizobium loti transcriptional regulator mlr6990 SWALL:Q987M7 (EMBL:AP003010) (299 aa) fasta scores: E(): 1.3e-27, 32.42% id in 293 aa; LysR family transcriptional regulator 2158751 3094920 BPSS1586 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111594.1 2157837 R 272560 CDS YP_111595.1 53722610 3096603 2158918..2159871 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri agmatinase SpeB or b2937 or z4281 or ecs3812 or sf2927 SWALL:SPEB_ECOLI (SWALL:P16936) (306 aa) fasta scores: E(): 1.3e-23, 42.17% id in 294 aa, and to Pseudomonas aeruginosa agmatinase SpeB2 or pa1421 SWALL:Q9I3S3 (EMBL:AE004571) (319 aa) fasta scores: E(): 1.3e-89, 71.47% id in 319 aa; agmatinase 2159871 speB 3096603 speB Burkholderia pseudomallei K96243 agmatinase YP_111595.1 2158918 D 272560 CDS YP_111596.1 53722611 3097129 2160486..2161886 1 NC_006351.1 hypothetical protein 2161886 3097129 BPSS1588 Burkholderia pseudomallei K96243 hypothetical protein YP_111596.1 2160486 D 272560 CDS YP_111597.1 53722612 3097130 2163237..2164037 1 NC_006351.1 Similar to Pseudomonas putida hypothetical protein pp5399 SWALL:AAN70963 (EMBL:AE016794) (256 aa) fasta scores: E(): 7.6e-41, 46.18% id in 249 aa; hypothetical protein 2164037 3097130 BPSS1589 Burkholderia pseudomallei K96243 hypothetical protein YP_111597.1 2163237 D 272560 CDS YP_111598.1 53722613 3096439 2164292..2164522 1 NC_006351.1 hypothetical protein 2164522 3096439 BPSS1590 Burkholderia pseudomallei K96243 hypothetical protein YP_111598.1 2164292 D 272560 CDS YP_111599.1 53722614 3095725 2164673..2165557 1 NC_006351.1 hypothetical protein 2165557 3095725 BPSS1591 Burkholderia pseudomallei K96243 hypothetical protein YP_111599.1 2164673 D 272560 CDS YP_111600.1 53722615 3095726 complement(2165625..2167430) 1 NC_006351.1 Similar to Burkholderia pseudomallei SctC SWALL:Q93L02 (EMBL:AF074878) (588 aa) fasta scores: E(): 5.5e-34, 51.72% id in 609 aa, and to Xanthomonas campestris hypersensitivity response secretion protein Hrpa1 precursor hrpa1 SWALL:HRA1_XANCV (SWALL:P80151) (607 aa) fasta scores: E(): 1.5e-56, 46.31% id in 611 aa; type III secretion system protein 2167430 3095726 BPSS1592 Burkholderia pseudomallei K96243 type III secretion system protein YP_111600.1 2165625 R 272560 CDS YP_111601.1 53722616 3095393 complement(2167547..2169220) 1 NC_006351.1 Similar to Escherichia coli minor fimbrial subunit PilV SWALL:Q93AE4 (EMBL:AF422146) (454 aa) fasta scores: E(): 0.00091, 27.79% id in 385 aa, and to Salmonella typhi PilV or sty4550 SWALL:O51801 (EMBL:AF000001) (435 aa) fasta scores: E(): 1.4e-05, 24.45% id in 458 aa; type IV pilus biosynthesis protein 2169220 pilV 3095393 pilV Burkholderia pseudomallei K96243 type IV pilus biosynthesis protein YP_111601.1 2167547 R 272560 CDS YP_111602.1 53722617 3095471 complement(2169229..2169708) 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein sco7368 sco7368 or sc9h11.22 SWALL:Q9KYL9 (EMBL:AL939131) (187 aa) fasta scores: E(): 9.7, 32.33% id in 133 aa; hypothetical protein 2169708 3095471 BPSS1594 Burkholderia pseudomallei K96243 hypothetical protein YP_111602.1 2169229 R 272560 CDS YP_111603.1 53722618 3095297 complement(2169748..2170302) 1 NC_006351.1 Similar to Escherichia coli major pilin subunit PilS SWALL:Q93AE6 (EMBL:AF422146) (178 aa) fasta scores: E(): 0.00017, 25.64% id in 156 aa, and to Escherichia coli bundlin beta-1 BfpA SWALL:Q9F5V1 (EMBL:AF304471) (195 aa) fasta scores: E(): 3.2e-05, 28.31% id in 166 aa; major pilin subunit 2170302 pilS 3095297 pilS Burkholderia pseudomallei K96243 major pilin subunit YP_111603.1 2169748 R 272560 CDS YP_111604.1 53722619 3095470 complement(2170335..2171411) 1 NC_006351.1 Similar to Escherichia coli BfpE SWALL:Q47071 (EMBL:Z68186) (352 aa) fasta scores: E(): 3e-47, 38.06% id in 352 aa, and to Salmonella typhi, and Salmonella dublin PilR or sty4546 SWALL:Q9ZIV0 (EMBL:AF000001) (361 aa) fasta scores: E(): 9.3e-29, 34.07% id in 361 aa; type IV pilus biosynthesis protein 2171411 pilR 3095470 pilR Burkholderia pseudomallei K96243 type IV pilus biosynthesis protein YP_111604.1 2170335 R 272560 CDS YP_111605.1 53722620 3095469 complement(2171401..2173011) 1 NC_006351.1 Similar to Escherichia coli BfpD SWALL:Q47070 (EMBL:Z68186) (534 aa) fasta scores: E(): 3.2e-44, 35.28% id in 496 aa, and to Salmonella dublin PilQ SWALL:Q9KHW5 (EMBL:AF247502) (571 aa) fasta scores: E(): 2.5e-31, 33.33% id in 471 aa; type IV pilus biosynthesis protein 2173011 pilQ 3095469 pilQ Burkholderia pseudomallei K96243 type IV pilus biosynthesis protein YP_111605.1 2171401 R 272560 CDS YP_111606.1 53722621 3096322 complement(2173008..2173511) 1 NC_006351.1 hypothetical protein 2173511 3096322 BPSS1598 Burkholderia pseudomallei K96243 hypothetical protein YP_111606.1 2173008 R 272560 CDS YP_111607.1 53722622 3095346 complement(2173522..2174820) 1 NC_006351.1 Weakly similar to Escherichia coli PilO SWALL:Q93D65 (EMBL:AF399919) (415 aa) fasta scores: E(): 0.016, 29% id in 231 aa; type IV pilus biosynthesis protein 2174820 pilO 3095346 pilO Burkholderia pseudomallei K96243 type IV pilus biosynthesis protein YP_111607.1 2173522 R 272560 CDS YP_111608.1 53722623 3095327 complement(2174832..2176601) 1 NC_006351.1 Similar to Escherichia coli PilN protein SWALL:Q9F533 (EMBL:AP002527) (547 aa) fasta scores: E(): 2.3e-27, 32.99% id in 588 aa, and to Yersinia pseudotuberculosis lipoprotein PilN SWALL:Q8KR30 (EMBL:AY047316) (530 aa) fasta scores: E(): 5.2e-27, 35.94% id in 409 aa; type IV pilus biosynthesis protein 2176601 pilN 3095327 pilN Burkholderia pseudomallei K96243 type IV pilus biosynthesis protein YP_111608.1 2174832 R 272560 CDS YP_111609.1 53722624 3096323 complement(2176601..2177170) 1 NC_006351.1 Similar to Escherichia coli BfpG SWALL:Q47067 (EMBL:Z68186) (133 aa) fasta scores: E(): 0.0014, 34.94% id in 83 aa; type IV pilus biosynthesis protein 2177170 3096323 BPSS1601 Burkholderia pseudomallei K96243 type IV pilus biosynthesis protein YP_111609.1 2176601 R 272560 CDS YP_111610.1 53722625 3095406 2177487..2178593 1 NC_006351.1 Similar to Neisseria gonorrhoeae twitching motility protein PilT SWALL:PILT_NEIGO (SWALL:Q06581) (374 aa) fasta scores: E(): 2.1e-25, 34.02% id in 291 aa, and to Pseudomonas aeruginosa twitching mobility protein PilT or pa0395 SWALL:PILT_PSEAE (SWALL:P24559) (344 aa) fasta scores: E(): 2.8e-24, 31.61% id in 329 aa; twitching motility protein 2178593 pilT 3095406 pilT Burkholderia pseudomallei K96243 twitching motility protein YP_111610.1 2177487 D 272560 CDS YP_111611.1 53722626 3095637 complement(2178792..2180597) 1 NC_006351.1 Similar to Xanthomonas campestris hypersensitivity response secretion protein Hrpa1 precursor hrpa1 SWALL:HRA1_XANCV (SWALL:P80151) (607 aa) fasta scores: E(): 6.1e-11, 27.66% id in 459 aa, and to Yersinia enterocolitica yop proteins translocation protein C precursor YscC SWALL:YSCC_YEREN (SWALL:Q01244) (607 aa) fasta scores: E(): 3.4e-10, 30.98% id in 255 aa; secretion protein 2180597 3095637 BPSS1603 Burkholderia pseudomallei K96243 secretion protein YP_111611.1 2178792 R 272560 CDS YP_111612.1 53722627 3095320 complement(2180594..2181328) 1 NC_006351.1 Similar to Escherichia coli phosphate regulon transcriptional regulatory protein PhoB or b0399 or z0497 or ecs0449 SWALL:PHOB_ECOLI (SWALL:P08402) (229 aa) fasta scores: E(): 2e-20, 33.18% id in 226 aa, and to Klebsiella pneumoniae phosphate regulon transcriptional regulatory protein PhoB SWALL:PHOB_KLEPN (SWALL:P45605) (229 aa) fasta scores: E(): 4e-21, 33.62% id in 226 aa; two-component system response regulator 2181328 3095320 BPSS1604 Burkholderia pseudomallei K96243 two-component system response regulator YP_111612.1 2180594 R 272560 CDS YP_111613.1 53722628 3095321 complement(2181394..2182479) 1 NC_006351.1 Similar to Deinococcus radiodurans sensor histidine kinase dr1606 SWALL:Q9RTZ2 (EMBL:AE002004) (433 aa) fasta scores: E(): 4.8e-10, 30.22% id in 354 aa; two-component system sensor kinase 2182479 3095321 BPSS1605 Burkholderia pseudomallei K96243 two-component system sensor kinase YP_111613.1 2181394 R 272560 CDS YP_111614.1 53722629 3096533 complement(2182607..2183251) 1 NC_006351.1 hypothetical protein 2183251 3096533 BPSS1606 Burkholderia pseudomallei K96243 hypothetical protein YP_111614.1 2182607 R 272560 CDS YP_111615.1 53722630 3096161 2183466..2183954 1 NC_006351.1 Similar to Xanthomonas campestris HrpB1 SWALL:Q56781 (EMBL:U33548) (151 aa) fasta scores: E(): 9.6e-05, 28.07% id in 114 aa, and to Xanthomonas campestris HrpB1 protein or xcc1231 SWALL:AAM40529 (EMBL:AE012222) (151 aa) fasta scores: E(): 9.6e-05, 29.33% id in 150 aa; hypothetical protein 2183954 3096161 BPSS1607 Burkholderia pseudomallei K96243 hypothetical protein YP_111615.1 2183466 D 272560 CDS YP_111616.1 53722631 3096162 complement(2184499..2185161) 1 NC_006351.1 Similar to Agrobacterium tumefaciens acetyltransferase atu4896 or agr_l_4 SWALL:Q8U6B2 (EMBL:AE009417) (200 aa) fasta scores: E(): 7.2e-06, 26.08% id in 184 aa, and to Thermoanaerobacter tengcongensis acetyltransferases, including N-acetylases of ribosomal proteins riml or tte1540 SWALL:Q8R9Q9 (EMBL:AE013110) (185 aa) fasta scores: E(): 0.0013, 25.54% id in 184 aa; hypothetical protein 2185161 3096162 BPSS1608 Burkholderia pseudomallei K96243 hypothetical protein YP_111616.1 2184499 R 272560 CDS YP_111617.1 53722632 3096937 2185370..2186017 1 NC_006351.1 Similar to Gossypium hirsutum proline-rich cell wall protein SWALL:Q39789 (EMBL:L17308) (214 aa) fasta scores: E(): 1.3, 24.74% id in 198 aa; hypothetical protein 2186017 3096937 BPSS1609 Burkholderia pseudomallei K96243 hypothetical protein YP_111617.1 2185370 D 272560 CDS YP_111618.1 53722633 3095884 complement(2186573..2188018) 1 NC_006351.1 Similar to Ralstonia solanacearum regulatory protein HrpB or rsp0873 or rs01644 SWALL:HRPB_RALSO (SWALL:P31778) (477 aa) fasta scores: E(): 1e-53, 37.65% id in 486 aa, and to Burkholderia pseudomallei hypothetical 54.7 kDa protein SWALL:Q93L01 (EMBL:AF074878) (483 aa) fasta scores: E(): 2.9e-59, 41.17% id in 493 aa; AraC family transcription regulator 2188018 3095884 BPSS1610 Burkholderia pseudomallei K96243 AraC family transcription regulator YP_111618.1 2186573 R 272560 CDS YP_111619.1 53722634 3095885 complement(2188230..2188685) 1 NC_006351.1 Similar to Xanthomonas campestris HpaB SWALL:Q9WWG3 (EMBL:AF056246) (162 aa) fasta scores: E(): 2e-29, 53.84% id in 156 aa, and to Burkholderia pseudomallei hypothetical 16.8 kDa protein SWALL:Q93KY8 (EMBL:AF074878) (151 aa) fasta scores: E(): 2e-41, 68% id in 150 aa; hypothetical protein 2188685 3095885 BPSS1611 Burkholderia pseudomallei K96243 hypothetical protein YP_111619.1 2188230 R 272560 CDS YP_111620.1 53722635 3096034 complement(2188778..2188966) 1 NC_006351.1 hypothetical protein 2188966 3096034 BPSS1612 Burkholderia pseudomallei K96243 hypothetical protein YP_111620.1 2188778 R 272560 CDS YP_111621.1 53722636 3096787 complement(2189128..2189379) 1 NC_006351.1 Similar to Burkholderia pseudomallei hypothetical 8.8 kDa protein SWALL:Q93KY9 (EMBL:AF074878) (82 aa) fasta scores: E(): 0.0014, 37.34% id in 83 aa, and to Xanthomonas axonopodis HrpD6 protein or xac0398 SWALL:Q8PQC8 (EMBL:AE011666) (80 aa) fasta scores: E(): 8.1, 25.67% id in 74 aa; type III secretion protein 2189379 3096787 BPSS1613 Burkholderia pseudomallei K96243 type III secretion protein YP_111621.1 2189128 R 272560 CDS YP_111622.1 53722637 3096788 complement(2189407..2190390) 1 NC_006351.1 Similar to Burkholderia pseudomallei SctD SWALL:Q93KZ0 (EMBL:AF074878) (349 aa) fasta scores: E(): 2.3e-32, 42.38% id in 335 aa, and to Xanthomonas campestris Hrpd5 SWALL:Q9WWG0 (EMBL:AF056246) (312 aa) fasta scores: E(): 1.2e-14, 32.51% id in 326 aa; type III secretion protein 2190390 3096788 BPSS1614 Burkholderia pseudomallei K96243 type III secretion protein YP_111622.1 2189407 R 272560 CDS YP_111623.1 53722638 3096219 complement(2190586..2191455) 1 NC_006351.1 Similar to Xanthomonas campestris HpaA protein or xcc1224 SWALL:AAM40522 (EMBL:AE012221) (271 aa) fasta scores: E(): 0.00061, 29.91% id in 234 aa, and to Burkholderia pseudomallei hypothetical 34.4 kDa protein SWALL:Q9ZGQ9 (EMBL:AF074878) (317 aa) fasta scores: E(): 2.3e-06, 30.14% id in 282 aa; type III secretion protein 2191455 3096219 BPSS1615 Burkholderia pseudomallei K96243 type III secretion protein YP_111623.1 2190586 R 272560 CDS YP_111624.1 53722639 3095167 complement(2191452..2191715) 1 NC_006351.1 Similar to Burkholderia pseudomallei SctS SWALL:Q9ZGR0 (EMBL:AF074878) (87 aa) fasta scores: E(): 5.3e-16, 58.14% id in 86 aa, and to Xanthomonas oryzae pv. oryzicola HrcS SWALL:Q93MH8 (EMBL:AF404819) (86 aa) fasta scores: E(): 2.2e-15, 53.48% id in 86 aa; type III secretion protein 2191715 3095167 BPSS1616 Burkholderia pseudomallei K96243 type III secretion protein YP_111624.1 2191452 R 272560 CDS YP_111625.1 53722640 3095168 complement(2191756..2192406) 1 NC_006351.1 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 2192406 3095168 BPSS1617 Burkholderia pseudomallei K96243 type III secretion system protein YP_111625.1 2191756 R 272560 CDS YP_111626.1 53722641 3096820 complement(2192393..2193679) 1 NC_006351.1 Similar to Burkholderia pseudomallei SctQ SWALL:Q9ZGR1 (EMBL:AF074878) (310 aa) fasta scores: E(): 4.5e-10, 32.7% id in 373 aa, and to Xanthomonas campestris HrcQ SWALL:Q9WWF7 (EMBL:AF056246) (268 aa) fasta scores: E(): 6.3e-07, 30.38% id in 316 aa; type III secretion protein 2193679 3096820 BPSS1618 Burkholderia pseudomallei K96243 type III secretion protein YP_111626.1 2192393 R 272560 CDS YP_111627.1 53722642 3096417 complement(2193709..2194320) 1 NC_006351.1 Similar to Burkholderia pseudomallei hypothetical 24.8 kDa protein SWALL:Q9ZGR2 (EMBL:AF074878) (227 aa) fasta scores: E(): 4.2e-08, 35.13% id in 222 aa, and to Ralstonia solanacearum Hrp associated protein HpaP or rsp0862 or rs01633 SWALL:HPAP_RALSO (SWALL:P35651) (197 aa) fasta scores: E(): 3.8e-06, 33.51% id in 188 aa; type III secretion protein 2194320 3096417 BPSS1619 Burkholderia pseudomallei K96243 type III secretion protein YP_111627.1 2193709 R 272560 CDS YP_111628.1 53722643 3096418 complement(2194317..2196389) 1 NC_006351.1 Similar to Ralstonia solanacearum hypersensitivity response secretion protein HrcV or HrpO or rsp0863 or rs01634 SWALL:HRCV_RALSO (SWALL:P35656) (690 aa) fasta scores: E(): 4.6e-146, 60.49% id in 681 aa, and to Acidovorax avenae subsp. avenae HrpO SWALL:Q9F1J6 (EMBL:AB053454) (674 aa) fasta scores: E(): 6.3e-123, 55.78% id in 674 aa; type III secretion protein 2196389 3096418 BPSS1620 Burkholderia pseudomallei K96243 type III secretion protein YP_111628.1 2194317 R 272560 CDS YP_111629.1 53722644 3096071 complement(2196386..2197468) 1 NC_006351.1 Similar to Burkholderia pseudomallei SctU SWALL:Q93KZ2 (EMBL:AF074878) (351 aa) fasta scores: E(): 7.7e-60, 47.85% id in 349 aa, and to Ralstonia solanacearum hypersensitivity response secretion protein HrcU or HrpN or rsp0864 or rs01635 SWALL:HRCU_RALSO (SWALL:P35652) (357 aa) fasta scores: E(): 6.8e-54, 48.01% id in 352 aa; type III secretion system protein HrcU 2197468 3096071 BPSS1621 Burkholderia pseudomallei K96243 type III secretion system protein HrcU YP_111629.1 2196386 R 272560 CDS YP_111630.1 53722645 3095189 2197704..2198285 1 NC_006351.1 Similar to Burkholderia pseudomallei hypothetical 19.6 kDa protein SWALL:Q93KZ3 (EMBL:AF074878) (178 aa) fasta scores: E(): 2.1e-14, 35.29% id in 170 aa, and to Xanthomonas oryzae HrpBL SWALL:Q9K2Q2 (EMBL:AB045311) (151 aa) fasta scores: E(): 4.2e-05, 31.7% id in 123 aa; type III secretion protein 2198285 3095189 BPSS1622 Burkholderia pseudomallei K96243 type III secretion protein YP_111630.1 2197704 D 272560 CDS YP_111631.1 53722646 3095190 2198299..2198715 1 NC_006351.1 Similar to Xanthomonas oryzae Hrpb2 SWALL:Q9K3A4 (EMBL:AB045311) (130 aa) fasta scores: E(): 8.7e-06, 30.08% id in 123 aa, and to Xanthomonas campestris Hrpb2 SWALL:Q56782 (EMBL:U33548) (130 aa) fasta scores: E(): 1.9e-05, 29.26% id in 123 aa; type III secretion protein 2198715 3095190 BPSS1623 Burkholderia pseudomallei K96243 type III secretion protein YP_111631.1 2198299 D 272560 CDS YP_111632.1 53722647 3095191 2198712..2199566 1 NC_006351.1 Similar to Burkholderia pseudomallei SctJ SWALL:Q93KZ5 (EMBL:AF074878) (274 aa) fasta scores: E(): 8.5e-50, 60.44% id in 273 aa, and to Ralstonia solanacearum Hrp conserved lipoprotein HrcJ or rsp0867 or rs01638 SWALL:Q52492 (EMBL:AJ245811) (269 aa) fasta scores: E(): 5.4e-42, 54.51% id in 266 aa; type III secretion protein 2199566 3095191 BPSS1624 Burkholderia pseudomallei K96243 type III secretion protein YP_111632.1 2198712 D 272560 CDS YP_111633.1 53722648 3095589 2199563..2200240 1 NC_006351.1 Similar to Xanthomonas oryzae HrpB4 SWALL:Q9LBD4 (EMBL:AF026197) (209 aa) fasta scores: E(): 0.0038, 29.41% id in 204 aa, and to Ralstonia solanacearum HrpH protein or rsp0868 or rs01639 SWALL:Q52493 (EMBL:AJ245811) (209 aa) fasta scores: E(): 0.0068, 33.89% id in 177 aa; type III secretion protein 2200240 3095589 BPSS1625 Burkholderia pseudomallei K96243 type III secretion protein YP_111633.1 2199563 D 272560 CDS YP_111634.1 53722649 3095590 2200225..2200941 1 NC_006351.1 Similar to Burkholderia pseudomallei SctL SWALL:Q93KZ7 (EMBL:AF074878) (289 aa) fasta scores: E(): 1.6e-30, 45.79% id in 238 aa, and to Ralstonia solanacearum HrpF protein or rsp0869 or rs01640 SWALL:Q8XRH8 (EMBL:AL646081) (301 aa) fasta scores: E(): 2.8e-16, 38.26% id in 230 aa; type III secretion system protein HrpB 2200941 3095590 BPSS1626 Burkholderia pseudomallei K96243 type III secretion system protein HrpB YP_111634.1 2200225 D 272560 CDS YP_111635.1 53722650 3095522 2200938..2202266 1 NC_006351.1 Similar to Burkholderia pseudomallei SctN SWALL:Q93KZ8 (EMBL:AF074878) (449 aa) fasta scores: E(): 1.1e-115, 73.22% id in 437 aa, and to Xanthomonas campestris probable ATP synthase HrpB6 SWALL:HRB6_XANCV (SWALL:P80153) (442 aa) fasta scores: E(): 4.4e-106, 71.63% id in 416 aa; type III secretion system ATPase 2202266 3095522 BPSS1627 Burkholderia pseudomallei K96243 type III secretion system ATPase YP_111635.1 2200938 D 272560 CDS YP_111636.1 53722651 3096887 2202263..2202790 1 NC_006351.1 Similar to Burkholderia pseudomallei orf7 SWALL:Q93KZ9 (EMBL:AF074878) (168 aa) fasta scores: E(): 4.1e-08, 33.95% id in 162 aa, and to Ralstonia solanacearum HrpD protein SWALL:Q52496 (EMBL:AJ245811) (166 aa) fasta scores: E(): 0.0027, 32.14% id in 140 aa; type III secretion protein 2202790 3096887 BPSS1628 Burkholderia pseudomallei K96243 type III secretion protein YP_111636.1 2202263 D 272560 CDS YP_111637.1 53722652 3096888 2202787..2203818 1 NC_006351.1 Similar to Burkholderia pseudomallei SctT SWALL:Q93L00 (EMBL:AF074878) (240 aa) fasta scores: E(): 4.4e-34, 49.78% id in 231 aa, and to Xanthomonas campestris HrpB8 protein HrcT or xcc1238 SWALL:AAM40536 (EMBL:AE012222) (276 aa) fasta scores: E(): 5.2e-30, 43.12% id in 269 aa. CDS is extended at the C-terminus in comparison to similar proteins.; type III secretion protein 2203818 3096888 BPSS1629 Burkholderia pseudomallei K96243 type III secretion protein YP_111637.1 2202787 D 272560 CDS YP_111638.1 53722653 3096210 2204186..2205952 1 NC_006351.1 C-terminal region is similar to Ralstonia solanacearum hypothetical transmembrane protein rsp0101 or rs03022 SWALL:Q8XTK7 (EMBL:AL646076) (484 aa) fasta scores: E(): 6.2e-08, 27.91% id in 498 aa; hypothetical protein 2205952 3096210 BPSS1630 Burkholderia pseudomallei K96243 hypothetical protein YP_111638.1 2204186 D 272560 CDS YP_111639.1 53722654 3095627 complement(2206192..2207145) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa2304 SWALL:Q9I1H1 (EMBL:AE004656) (362 aa) fasta scores: E(): 1.4e-39, 41.03% id in 290 aa, and to Streptomyces avermitilis SyrP-like protein SWALL:Q93H52 (EMBL:AB070951) (311 aa) fasta scores: E(): 1.4e-39, 40.7% id in 285 aa; hypothetical protein 2207145 3095627 BPSS1631 Burkholderia pseudomallei K96243 hypothetical protein YP_111639.1 2206192 R 272560 CDS YP_111640.1 53722655 3095628 complement(2207213..2225497) 1 NC_006351.1 Similar to Ralstonia solanacearum probable peptide synthetase rsp0641 or rs05860 SWALL:Q8XS40 (EMBL:AL646079) (6889 aa) fasta scores: E(): 0, 45.74% id in 4411 aa, and to Pseudomonas syringae syringomycin synthetase syrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 6.6e-215, 40.88% id in 5709 aa; non-ribosomal peptide synthetase 2225497 3095628 BPSS1632 Burkholderia pseudomallei K96243 non-ribosomal peptide synthetase YP_111640.1 2207213 R 272560 CDS YP_111641.1 53722656 3095217 complement(2225494..2238816) 1 NC_006351.1 Similar to Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 5.4e-169, 43.97% id in 4498 aa, and to Xenorhabdus bovienii peptide synthetase XpsB SWALL:Q8VQF8 (EMBL:AF455810) (3316 aa) fasta scores: E(): 4.3e-157, 42.45% id in 3387 aa; non-ribosomal peptide synthetase 2238816 3095217 BPSS1633 Burkholderia pseudomallei K96243 non-ribosomal peptide synthetase YP_111641.1 2225494 R 272560 CDS YP_111642.1 53722657 3097150 complement(2238813..2248688) 1 NC_006351.1 Similar to Nostoc sp. GSV224 NosC SWALL:Q9RAH2 (EMBL:AF204805) (3317 aa) fasta scores: E(): 0, 36.9% id in 3390 aa, and to Ralstonia solanacearum probable peptide synthetase rsp0642 or rs05859 SWALL:Q8XS39 (EMBL:AL646079) (5953 aa) fasta scores: E(): 0, 47.91% id in 3304 aa; non-ribosomal peptide synthetase 2248688 3097150 BPSS1634 Burkholderia pseudomallei K96243 non-ribosomal peptide synthetase YP_111642.1 2238813 R 272560 CDS YP_111643.1 53722658 3097151 complement(2248989..2251772) 1 NC_006351.1 Similar over the N-terminal region to Rhizobium meliloti diaminobutyrate--2-oxoglutarate aminotransferase RhbA or RhsA or ra1258 or sma2400 SWALL:RHBA_RHIME (SWALL:Q9Z3R2) (470 aa) fasta scores: E(): 1.1e-81, 53.84% id in 429 aa, and to Pseudomonas aeruginosa probable class III aminotransferase pa2413 SWALL:Q9I168 (EMBL:AE004668) (469 aa) fasta scores: E(): 1.6e-82, 54.48% id in 435 aa; class III aminotransferase 2251772 3097151 BPSS1635 Burkholderia pseudomallei K96243 class III aminotransferase YP_111643.1 2248989 R 272560 CDS YP_111644.1 53722659 3095863 complement(2253512..2255230) 1 NC_006351.1 catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 2255230 poxB 3095863 poxB Burkholderia pseudomallei K96243 pyruvate dehydrogenase YP_111644.1 2253512 R 272560 CDS YP_111645.1 53722660 3096515 complement(2255243..2256574) 1 NC_006351.1 Similar to Clostridium kluyveri 4-hydroxybutyrate coenzyme A transferase Cat2 SWALL:CAT2_CLOKL (SWALL:P38942) (429 aa) fasta scores: E(): 2.1e-59, 42.75% id in 428 aa, and to Yersinia pestis similar to 4-hydroxybutyrate CoA transferase ypo1926 or y2385 SWALL:Q9ZC36 (EMBL:AL031866) (440 aa) fasta scores: E(): 2.3e-102, 60.13% id in 439 aa; 4-hydroxybutyrate CoA-transferase 2256574 cat2 3096515 cat2 Burkholderia pseudomallei K96243 4-hydroxybutyrate CoA-transferase YP_111645.1 2255243 R 272560 CDS YP_111646.1 53722661 3095769 complement(2256599..2257126) 1 NC_006351.1 Similar to Salmonella enteritidis FkbR2 SWALL:Q93DX2 (EMBL:AF376036) (175 aa) fasta scores: E(): 3.6e-51, 74.28% id in 175 aa, and to Yersinia pestis similar to regulatory proteins ypo1927 SWALL:Q9ZC37 (EMBL:AL031866) (180 aa) fasta scores: E(): 1.2e-55, 76.57% id in 175 aa; hydratase 2257126 3095769 BPSS1638 Burkholderia pseudomallei K96243 hydratase YP_111646.1 2256599 R 272560 CDS YP_111647.1 53722662 3096759 complement(2257163..2258044) 1 NC_006351.1 Similar to Leuconostoc mesenteroides citrate lyase beta chain CitE SWALL:CILB_LEUMC (SWALL:O53078) (302 aa) fasta scores: E(): 3.9e-14, 33.09% id in 284 aa, and to Yersinia pestis similar to CitE ypo1928 or y2383 SWALL:Q9ZC38 (EMBL:AL031866) (280 aa) fasta scores: E(): 1.7e-36, 46.29% id in 270 aa; citrate lyase subunit beta 2258044 3096759 BPSS1639 Burkholderia pseudomallei K96243 citrate lyase subunit beta YP_111647.1 2257163 R 272560 CDS YP_111648.1 53722663 3096760 complement(2258149..2259060) 1 NC_006351.1 Similar to Brucella melitensis transcriptional regulatory protein, LysR family bmeii1077 SWALL:Q8YB24 (EMBL:AE009740) (294 aa) fasta scores: E(): 3.6e-60, 53.55% id in 295 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1267 or rs05312 SWALL:Q8XQG0 (EMBL:AL646083) (294 aa) fasta scores: E(): 2.9e-56, 52.54% id in 295 aa; LysR family transcriptional regulator 2259060 3096760 BPSS1640 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111648.1 2258149 R 272560 CDS YP_111649.1 53722664 3095831 complement(2259622..2260542) 1 NC_006351.1 Similar to Pseudomonas aeruginosa transcriptional regulator PtxR or pa2258 SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 7e-29, 35.21% id in 301 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa1312 SWALL:Q9I432 (EMBL:AE004560) (303 aa) fasta scores: E(): 4.2e-56, 55.1% id in 294 aa; LysR family transcriptional regulator 2260542 3095831 BPSS1643 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111649.1 2259622 R 272560 CDS YP_111650.1 53722665 3097123 2260651..2262048 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable MFS transporter pa1313 SWALL:Q9I431 (EMBL:AE004560) (452 aa) fasta scores: E(): 2.3e-73, 51.78% id in 448 aa, and to Streptomyces coelicolor efflux membrane protein sco2498 or scc121.01 or scc82.04 SWALL:CAD55309 (EMBL:AL939112) (481 aa) fasta scores: E(): 3.5e-27, 31.16% id in 430 aa; hypothetical protein 2262048 3097123 BPSS1644 Burkholderia pseudomallei K96243 hypothetical protein YP_111650.1 2260651 D 272560 CDS YP_111651.1 53722666 3097124 2262045..2262443 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa1314 SWALL:Q9I430 (EMBL:AE004560) (128 aa) fasta scores: E(): 2.4e-17, 48% id in 125 aa, and to Salmonella typhimurium cytoplasmic protein stm2910 SWALL:Q8ZMH1 (EMBL:AE008832) (126 aa) fasta scores: E(): 3.5e-14, 41.86% id in 129 aa; hypothetical protein 2262443 3097124 BPSS1645 Burkholderia pseudomallei K96243 hypothetical protein YP_111651.1 2262045 D 272560 CDS YP_111652.1 53722667 3096560 complement(2262606..2263775) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable two-component sensor pa2571 SWALL:Q9I0R5 (EMBL:AE004685) (470 aa) fasta scores: E(): 1.4e-47, 46.91% id in 373 aa, and to Xanthomonas campestris histidine kinase xcc1957 SWALL:AAM41246 (EMBL:AE012299) (408 aa) fasta scores: E(): 2.1e-47, 50.95% id in 314 aa; two-component sensor kinase 2263775 3096560 BPSS1646 Burkholderia pseudomallei K96243 two-component sensor kinase YP_111652.1 2262606 R 272560 CDS YP_111653.1 53722668 3096241 complement(2263768..2264946) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa1975 SWALL:Q9I2D0 (EMBL:AE004624) (387 aa) fasta scores: E(): 8.4e-50, 41.75% id in 364 aa, and to Rhizobium loti hypothetical protein Mlr1131 SWALL:Q98L89 (EMBL:AP002996) (361 aa) fasta scores: E(): 7.8e-48, 41.31% id in 351 aa; hypothetical protein 2264946 3096241 BPSS1647 Burkholderia pseudomallei K96243 hypothetical protein YP_111653.1 2263768 R 272560 CDS YP_111654.1 53722669 3096242 complement(2265019..2266446) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable two-component response regulator pa2572 SWALL:Q9I0R4 (EMBL:AE004685) (447 aa) fasta scores: E(): 1.5e-46, 37.41% id in 425 aa, and to Vibrio cholerae response regulator vc1087 SWALL:Q9KT18 (EMBL:AE004189) (447 aa) fasta scores: E(): 1.3e-18, 30.75% id in 439 aa; two-component response regulator 2266446 3096242 BPSS1648 Burkholderia pseudomallei K96243 two-component response regulator YP_111654.1 2265019 R 272560 CDS YP_111655.1 53722670 3094967 2266833..2269253 1 NC_006351.1 Similar over its C-terminal region to Dactylium dendroides galactose oxidase precursor GaoA SWALL:GAOA_DACDE (SWALL:Q01745) (680 aa) fasta scores: E(): 4.1e-70, 42.12% id in 489 aa, and partly to Polyangium cellulosum beta-mannanase SWALL:Q9ADL2 (EMBL:U24241) (502 aa) fasta scores: E(): 6.2e-10, 25.71% id in 350 aa; sugar-binding protein 2269253 3094967 BPSS1649 Burkholderia pseudomallei K96243 sugar-binding protein YP_111655.1 2266833 D 272560 CDS YP_111656.1 53722671 3094968 2269250..2269741 1 NC_006351.1 hypothetical protein 2269741 3094968 BPSS1650 Burkholderia pseudomallei K96243 hypothetical protein YP_111656.1 2269250 D 272560 CDS YP_111657.1 53722672 3095390 2269728..2270342 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane protein rsc2292 or rs01263 SWALL:Q8XX26 (EMBL:AL646069) (207 aa) fasta scores: E(): 2e-09, 32.14% id in 168 aa; hypothetical protein 2270342 3095390 BPSS1651 Burkholderia pseudomallei K96243 hypothetical protein YP_111657.1 2269728 D 272560 CDS YP_111658.1 53722673 3095457 complement(2270441..2271439) 1 NC_006351.1 Similar to Anabaena sp. patatin-like protein all2302 SWALL:Q8YUN7 (EMBL:AP003589) (390 aa) fasta scores: E(): 1.4e-07, 27.57% id in 330 aa, and to Oryza sativa patatin-like protein p0506a10.15 or p0674h09.28 SWALL:Q8S0E1 (EMBL:AP003418) (411 aa) fasta scores: E(): 8.9e-06, 26.73% id in 318 aa; patatin-like protein 2271439 3095457 BPSS1652 Burkholderia pseudomallei K96243 patatin-like protein YP_111658.1 2270441 R 272560 CDS YP_111659.1 53722674 3095458 complement(2272044..2272613) 1 NC_006351.1 Similar over the C-terminal region to Ralstonia solanacearum 4-hydroxybenzoate transporter transmembrane protein rsp0896 or rs01667 SWALL:Q8XRF8 (EMBL:AL646081) (458 aa) fasta scores: E(): 4.2e-09, 38.4% id in 138 aa, and to Alcaligenes eutrophus orf TfdK SWALL:P70737 (EMBL:U16782) (460 aa) fasta scores: E(): 8.1e-08, 32.06% id in 131 aa; hypothetical protein 2272613 3095458 BPSS1653 Burkholderia pseudomallei K96243 hypothetical protein YP_111659.1 2272044 R 272560 CDS YP_111660.1 53722675 3094930 complement(2272681..2275035) 1 NC_006351.1 Similar to Rhodococcus sp. NCIMB 9784 cytochrome P450 Rhf p450rhF SWALL:Q8KU27 (EMBL:AF459424) (773 aa) fasta scores: E(): 8.5e-183, 62.83% id in 783 aa, and to Rhodococcus erythropolis cytochrome p450 116 ThcB or Cyp116 SWALL:THCB_RHOER (SWALL:P43492) (436 aa) fasta scores: E(): 1.1e-88, 56.08% id in 419 aa; cytochrome P450 2275035 3094930 BPSS1654 Burkholderia pseudomallei K96243 cytochrome P450 YP_111660.1 2272681 R 272560 CDS YP_111661.1 53722676 3095555 2275313..2275453 1 NC_006351.1 hypothetical protein 2275453 3095555 BPSS1655 Burkholderia pseudomallei K96243 hypothetical protein YP_111661.1 2275313 D 272560 CDS YP_111662.1 53722677 3095556 2275525..2276781 1 NC_006351.1 Similar to Streptomyces atroolivaceus antibiotic transport protein SWALL:AAN85500 (EMBL:AF484556) (432 aa) fasta scores: E(): 1.4e-27, 31.64% id in 395 aa, and to Bradyrhizobium japonicum Blr5045 protein blr5045 SWALL:BAC50310 (EMBL:AP005953) (414 aa) fasta scores: E(): 2.4e-24, 32.39% id in 392 aa; hypothetical protein 2276781 3095556 BPSS1656 Burkholderia pseudomallei K96243 hypothetical protein YP_111662.1 2275525 D 272560 CDS YP_111663.1 53722678 3097236 2277526..2279721 1 NC_006351.1 Similar to Thermotoga neapolitana beta-glucosidase BglB SWALL:Q60038 (EMBL:Z77856) (720 aa) fasta scores: E(): 6.4e-57, 32.24% id in 732 aa, and to Cellvibrio gilvus beta-D-glucosidase precursor Cgb SWALL:P96316 (EMBL:D14068) (752 aa) fasta scores: E(): 4.6e-51, 42.05% id in 749 aa; beta-glucosidase 2279721 bglB 3097236 bglB Burkholderia pseudomallei K96243 beta-glucosidase YP_111663.1 2277526 D 272560 CDS YP_111664.1 53722679 3096980 2280113..2280697 1 NC_006351.1 No significant database matches. Possible alternative translational start sites; hypothetical protein 2280697 3096980 BPSS1658 Burkholderia pseudomallei K96243 hypothetical protein YP_111664.1 2280113 D 272560 CDS YP_111665.1 53722680 3096460 2280838..2281125 1 NC_006351.1 hypothetical protein 2281125 3096460 BPSS1659 Burkholderia pseudomallei K96243 hypothetical protein YP_111665.1 2280838 D 272560 CDS YP_111666.1 53722681 3096461 2281205..2281687 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc2888 or rs00212 SWALL:Q8XVE3 (EMBL:AL646072) (152 aa) fasta scores: E(): 8.7e-20, 42.5% id in 160 aa, and to Yersinia pestis hypothetical protein ypo1877 or y2433 SWALL:Q8ZF41 (EMBL:AJ414150) (101 aa) fasta scores: E(): 2e-09, 42.7% id in 96 aa; hypothetical protein 2281687 3096461 BPSS1660 Burkholderia pseudomallei K96243 hypothetical protein YP_111666.1 2281205 D 272560 CDS YP_111667.1 53722682 3095642 2281756..2281971 1 NC_006351.1 hypothetical protein 2281971 3095642 BPSS1661 Burkholderia pseudomallei K96243 hypothetical protein YP_111667.1 2281756 D 272560 CDS YP_111668.1 53722683 3095660 complement(2282552..2284477) 1 NC_006351.1 Similar to Escherichia coli selenocysteine-specific elongation factor SelB or FdhA or b3590 SWALL:SELB_ECOLI (SWALL:P14081) (614 aa) fasta scores: E(): 1.4e-43, 42.45% id in 636 aa, and to Pseudomonas aeruginosa selenocysteine-specific elongation factor SelB or pa4807 SWALL:Q9HV02 (EMBL:AE004893) (641 aa) fasta scores: E(): 5.8e-97, 49.76% id in 639 aa; selenocysteine-specific elongation factor 2284477 selB 3095660 selB Burkholderia pseudomallei K96243 selenocysteine-specific elongation factor YP_111668.1 2282552 R 272560 CDS YP_111669.1 53722684 3095756 complement(2284474..2285916) 1 NC_006351.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 2285916 selA 3095756 selA Burkholderia pseudomallei K96243 selenocysteine synthase YP_111669.1 2284474 R 272560 CDS YP_111670.1 53722685 3094981 complement(2285913..2286881) 1 NC_006351.1 Similar to Escherichia coli protein FdhE or b3891 SWALL:FDHE_ECOLI (SWALL:P13024) (309 aa) fasta scores: E(): 4.8e-35, 39.67% id in 305 aa, and to Salmonella typhi protein FdhE or sty3843 SWALL:Q8Z2U4 (EMBL:AL627279) (309 aa) fasta scores: E(): 2.1e-35, 40.32% id in 305 aa; protein FdhE 2286881 fdhE 3094981 fdhE Burkholderia pseudomallei K96243 protein FdhE YP_111670.1 2285913 R 272560 CDS YP_111671.1 53722686 3095425 complement(2287056..2287682) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 formate dehydrogenase, cytochrome B556 (FDO) subunit FdoI or b3892 or c4842 or z5434 or ecs4818 SWALL:FDOI_ECOLI (SWALL:P32174) (211 aa) fasta scores: E(): 4.6e-42, 54.32% id in 208 aa, and to Pseudomonas aeruginosa nitrate-inducible formate dehydrogenase, gamma subunit FdnI or pa4810 SWALL:Q9HUZ9 (EMBL:AE004894) (208 aa) fasta scores: E(): 1e-50, 62.81% id in 199 aa; formate dehydrogenase, cytochrome b556 (FDO) subunit 2287682 fdoI 3095425 fdoI Burkholderia pseudomallei K96243 formate dehydrogenase, cytochrome b556 (FDO) subunit YP_111671.1 2287056 R 272560 CDS YP_111672.1 53722687 3095192 complement(2287679..2288593) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri formate dehydrogenase-O, iron-sulfur subunit FdoH or b3893 or c4843 or sf3969 SWALL:FDOH_ECOLI (SWALL:P32175) (300 aa) fasta scores: E(): 2.4e-81, 68.21% id in 302 aa, and to Yersinia pestis formate dehydrogenase-o, iron-sulfur subunit fdoh or ypo4057 or y4077 SWALL:Q8Z9X8 (EMBL:AJ414160) (323 aa) fasta scores: E(): 1.8e-84, 72.26% id in 292 aa; formate dehydrogenase-O, iron-sulfur subunit 2288593 fdoH 3095192 fdoH Burkholderia pseudomallei K96243 formate dehydrogenase-O, iron-sulfur subunit YP_111672.1 2287679 R 272560 CDS YP_111673.1 53722688 3094982 complement(join(2288604..2291084,2291088..2291675)) 1 NC_006351.1 Similar to Escherichia coli formate dehydrogenase-O, major subunit Fdog or b3894 SWALL:FDOG_ECOLI (SWALL:P32176) (1016 aa) fasta scores: E(): 0, 66.6% id in 1021 aa, and to Shigella flexneri formate dehydrogenase-O, major subunit Fdog or sf3970 SWALL:AAN45405 (EMBL:AE015404) (1016 aa) fasta scores: E(): 0, 66.69% id in 1021 aa. This CDS contains an in-frame opal codon, UGA, at position 197. This opal codon encodes selenocysteine, which forms the active-site of the protein; formate dehydrogenase-O, major subunit 2291675 fdoG 3094982 fdoG Burkholderia pseudomallei K96243 formate dehydrogenase-O, major subunit YP_111673.1 2288604 R 272560 CDS YP_111674.1 53722689 3095163 complement(2292615..2293382) 1 NC_006351.1 Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc0146 or rs01016 SWALL:Q8Y335 (EMBL:AL646057) (251 aa) fasta scores: E(): 2e-61, 59.6% id in 255 aa, and to Xanthomonas axonopodis hypothetical protein Xac1712 xac1712 SWALL:Q8PLS7 (EMBL:AE011803) (253 aa) fasta scores: E(): 2.8e-45, 50.78% id in 254 aa; hypothetical protein 2293382 3095163 BPSS1669 Burkholderia pseudomallei K96243 hypothetical protein YP_111674.1 2292615 R 272560 CDS YP_111675.1 53722690 3095164 complement(2293634..2294569) 1 NC_006351.1 Similar to Agrobacterium tumefaciens ABC transporter substrate binding protein atu3415 or agr_l_2813 SWALL:Q8UAF9 (EMBL:AE009272) (355 aa) fasta scores: E(): 3.3e-65, 58.11% id in 308 aa, and to Escherichia coli, and Escherichia coli O6 cystine-binding periplasmic protein precursor FliY or b1920 or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 3.9e-07, 26.89% id in 238 aa. Note: Also similar to BPSS1674 (329 aa) fasta scores: E(): 1.4e-51, 57.097% identity in 310 aa overlap; hypothetical protein 2294569 3095164 BPSS1670 Burkholderia pseudomallei K96243 hypothetical protein YP_111675.1 2293634 R 272560 CDS YP_111676.1 53722691 3096511 complement(2295168..2297078) 1 NC_006351.1 Similar in its full length to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu3417 or agr_l_2810 SWALL:Q8UAF7 (EMBL:AE009272) (592 aa) fasta scores: E(): 1.6e-59, 66.61% id in 626 aa, and in its N-terminal region to Streptomyces coelicolor ATP-binding protein AtrC or sco5258 or 2sc7g11.20C SWALL:Q9F3K7 (EMBL:AL939123) (253 aa) fasta scores: E(): 2.3e-39, 59.83% id in 249 aa; ABC transporter ATP-binding protein 2297078 3096511 BPSS1671 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_111676.1 2295168 R 272560 CDS YP_111677.1 53722692 3095043 complement(2297194..2298516) 1 NC_006351.1 Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component A NtaA or NmoA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 1.9e-48, 37.77% id in 450 aa, and to Agrobacterium tumefaciens monooxygenase atu3420 or agr_l_2804 SWALL:Q8UAF4 (EMBL:AE009272) (453 aa) fasta scores: E(): 1.1e-124, 72.45% id in 432 aa; monooxygenase 2298516 3095043 BPSS1672 Burkholderia pseudomallei K96243 monooxygenase YP_111677.1 2297194 R 272560 CDS YP_111678.1 53722693 3095044 complement(2298572..2299573) 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein catu3421 or agr_l_2803 SWALL:Q8UAF3 (EMBL:AE009272) (335 aa) fasta scores: E(): 5.2e-67, 56.88% id in 327 aa, and to Bacillus subtilis hypothetical protein YwcH or ipa-44D SWALL:YWCH_BACSU (SWALL:P39606) (333 aa) fasta scores: E(): 5.3e-37, 42.16% id in 332 aa; hypothetical protein 2299573 3095044 BPSS1673 Burkholderia pseudomallei K96243 hypothetical protein YP_111678.1 2298572 R 272560 CDS YP_111679.1 53722694 3096057 complement(2299893..2300846) 1 NC_006351.1 Similar to Agrobacterium tumefaciens ABC transporter substrate binding protein atu3415 or agr_l_2813 SWALL:Q8UAF9 (EMBL:AE009272) (355 aa) fasta scores: E(): 8.3e-65, 55.8% id in 310 aa, and to Escherichia coli, and Escherichia coli O6 cystine-binding periplasmic protein precursor FliY or b1920 or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 8e-12, 32.91% id in 237 aa. Note: Also similar to BPSS1670 (312 aa) fasta scores: E(): 1.6e-56, 57.097% identity in 310 aa overlap; hypothetical protein 2300846 3096057 BPSS1674 Burkholderia pseudomallei K96243 hypothetical protein YP_111679.1 2299893 R 272560 CDS YP_111680.1 53722695 3097037 complement(2300932..2301483) 1 NC_006351.1 Similar to Agrobacterium tumefaciens acetyltransferase atu3418 or agr_l_2808 SWALL:Q8UAF6 (EMBL:AE009272) (181 aa) fasta scores: E(): 1.4e-29, 52.22% id in 180 aa, and to Streptomyces coelicolor acetyltransferase sco3175 or sce87.26 SWALL:Q9RKB2 (EMBL:AL939115) (161 aa) fasta scores: E(): 2.7e-06, 32.39% id in 142 aa; acetyltransferase 2301483 3097037 BPSS1675 Burkholderia pseudomallei K96243 acetyltransferase YP_111680.1 2300932 R 272560 CDS YP_111681.1 53722696 3097038 complement(2302418..2303440) 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein atu5238 or agr_pat_335 SWALL:Q8UK85 (EMBL:AE008946) (335 aa) fasta scores: E(): 2.1e-41, 40.92% id in 325 aa, and to Rhizobium meliloti hypothetical protein rb0421 or smb20435 SWALL:Q92WC2 (EMBL:AL603643) (331 aa) fasta scores: E(): 8.6e-39, 38.39% id in 323 aa; hypothetical protein 2303440 3097038 BPSS1676 Burkholderia pseudomallei K96243 hypothetical protein YP_111681.1 2302418 R 272560 CDS YP_111682.1 53722697 3096976 2304159..2304392 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp0793 or rs01914 SWALL:Q8XRN8 (EMBL:AL646080) (73 aa) fasta scores: E(): 1.4e-10, 53.84% id in 65 aa; hypothetical protein 2304392 3096976 BPSS1677 Burkholderia pseudomallei K96243 hypothetical protein YP_111682.1 2304159 D 272560 CDS YP_111683.1 53722698 3096670 2304652..2305575 1 NC_006351.1 Similar to Ralstonia solanacearum ribonuclease RNAse BN rsp1664 or rs02223 SWALL:Q8XPH6 (EMBL:AL646086) (324 aa) fasta scores: E(): 3.3e-35, 38.54% id in 288 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribonuclease BN Rbn or b3886 or c4833 or z5425 or ecs4809 SWALL:RBN_ECOLI (SWALL:P32146) (290 aa) fasta scores: E(): 8.5e-07, 27.06% id in 303 aa; ribonuclease 2305575 3096670 BPSS1678 Burkholderia pseudomallei K96243 ribonuclease YP_111683.1 2304652 D 272560 CDS YP_111684.1 53722699 3096671 2306033..2307187 1 NC_006351.1 Similar to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 6.7e-44, 44.33% id in 406 aa, and to Alcaligenes eutrophus hypothetical 40.6 kDa protein in gbd 3'region precursor SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 1.4e-36, 42.71% id in 391 aa; porin related exported protein 2307187 3096671 BPSS1679 Burkholderia pseudomallei K96243 porin related exported protein YP_111684.1 2306033 D 272560 CDS YP_111685.1 53722700 3096774 complement(2309027..2309449) 1 NC_006351.1 Similar to Bordetella pertussis Bph2 SWALL:P94344 (EMBL:U82555) (145 aa) fasta scores: E(): 3.7e-26, 65.27% id in 144 aa, and to Xylella fastidiosa histone-like protein xf1943 SWALL:Q9PC42 (EMBL:AE004013) (130 aa) fasta scores: E(): 1.2e-18, 54.61% id in 130 aa; histone-like protein 2309449 3096774 BPSS1680 Burkholderia pseudomallei K96243 histone-like protein YP_111685.1 2309027 R 272560 CDS YP_111686.1 53722701 3096587 2309745..2310872 1 NC_006351.1 Similar to Bradyrhizobium japonicum protein blr2360 SWALL:BAC47625 (EMBL:AP005943) (393 aa) fasta scores: E(): 1.2e-44, 40.11% id in 359 aa, and to Rhizobium loti hypothetical protein mlr1941 SWALL:Q98JH3 (EMBL:AP002998) (388 aa) fasta scores: E(): 7.4e-19, 30.97% id in 381 aa; hypothetical protein 2310872 3096587 BPSS1681 Burkholderia pseudomallei K96243 hypothetical protein YP_111686.1 2309745 D 272560 CDS YP_111687.1 53722702 3095010 complement(2311424..2312311) 1 NC_006351.1 Similar to Bacillus subtilis UTP--glucose-1-phosphate uridylyltransferase GtaB SWALL:GTAB_BACSU (SWALL:Q05852) (292 aa) fasta scores: E(): 3.2e-52, 49.48% id in 289 aa, and to Burkholderia pseudomallei UTP-glucose-1-phosphate uridylyltransferase SWALL:Q9F5N4 (EMBL:AF312223) (295 aa) fasta scores: E(): 5.5e-114, 98.64% id in 295 aa; UTP-glucose-1-phosphate uridylyltransferase 2312311 gtaB 3095010 gtaB Burkholderia pseudomallei K96243 UTP-glucose-1-phosphate uridylyltransferase YP_111687.1 2311424 R 272560 CDS YP_111688.1 53722703 3096588 2312964..2314121 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5458 SWALL:Q9HTB2 (EMBL:AE004958) (380 aa) fasta scores: E(): 2.1e-11, 28.83% id in 385 aa, and to Rhizobium loti exopolysaccharide biosynthesis protein mlr6758 SWALL:Q988F9 (EMBL:AP003010) (395 aa) fasta scores: E(): 2.5e-09, 27.69% id in 343 aa; lipopolysaccharide biosynthesis-related membrane protein 2314121 3096588 BPSS1683 Burkholderia pseudomallei K96243 lipopolysaccharide biosynthesis-related membrane protein YP_111688.1 2312964 D 272560 CDS YP_111689.1 53722704 3096455 complement(2314235..2316697) 1 NC_006351.1 Possible fusion protein. N-terminal region similar to Salmonella enterica first mannosyl transferase SWALL:Q00483 (EMBL:X61917) (385 aa) fasta scores: E(): 1.9e-82, 60.11% id in 361 aa, and C-terminal region to Agrobacterium tumefaciens glycosyltransferase atu3560 or agr_l_2541 SWALL:Q8UA15 (EMBL:AE009285) (382 aa) fasta scores: E(): 1.6e-41, 39.94% id in 383 aa. CDS is extended at the N-terminus in comparison to some similar proteins with matches in this region; lipopolysaccharide biosynthesys-related glycosyltransferase 2316697 3096455 BPSS1684 Burkholderia pseudomallei K96243 lipopolysaccharide biosynthesys-related glycosyltransferase YP_111689.1 2314235 R 272560 CDS YP_111690.1 53722705 3096487 complement(2316694..2318160) 1 NC_006351.1 Similar to Shigella flexneri O-antigen transporter RfbE or sf2100 SWALL:RFBE_SHIFL (SWALL:P37781) (418 aa) fasta scores: E(): 1.5e-24, 26.17% id in 424 aa, and to Salmonella typhi O-antigen transporter RfbX or sty2297 SWALL:RFBX_SALTI (SWALL:Q99191) (432 aa) fasta scores: E(): 2.6e-05, 21.56% id in 422 aa; lipopolysaccharide biosynthesis related membrane protein 2318160 3096487 BPSS1685 Burkholderia pseudomallei K96243 lipopolysaccharide biosynthesis related membrane protein YP_111690.1 2316694 R 272560 CDS YP_111691.1 53722706 3096488 complement(2318209..2320389) 1 NC_006351.1 Similar to Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 3.3e-39, 38.99% id in 695 aa, and to Anabaena sp. hypothetical protein all3696 SWALL:Q8YQW5 (EMBL:AP003594) (379 aa) fasta scores: E(): 2.6e-45, 38.03% id in 376 aa; hypothetical protein 2320389 3096488 BPSS1686 Burkholderia pseudomallei K96243 hypothetical protein YP_111691.1 2318209 R 272560 CDS YP_111692.1 53722707 3096186 2320944..2322002 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr1941 SWALL:Q98JH3 (EMBL:AP002998) (388 aa) fasta scores: E(): 3.8e-18, 35.77% id in 355 aa, and to Corynebacterium glutamicum predicted acyltransferases cgl2858 SWALL:BAC00251 (EMBL:AP005283) (356 aa) fasta scores: E(): 1.2e-11, 29.73% id in 380 aa; hypothetical protein 2322002 3096186 BPSS1687 Burkholderia pseudomallei K96243 hypothetical protein YP_111692.1 2320944 D 272560 CDS YP_111693.1 53722708 3095272 2322038..2323081 1 NC_006351.1 Similar to Pseudomonas aeruginosa GDP-mannose 4,6-dehydratase Gca or pa5453 SWALL:GM4D_PSEAE (SWALL:Q51366) (323 aa) fasta scores: E(): 1.6e-62, 58.63% id in 336 aa, and to Xanthomonas campestris GDP-mannose 4,6-dehydratase Gmd SWALL:Q93S88 (EMBL:AF204145) (344 aa) fasta scores: E(): 2.8e-105, 76.09% id in 343 aa; GCP-mannose 4,6-dehydratase 2323081 gca 3095272 gca Burkholderia pseudomallei K96243 GCP-mannose 4,6-dehydratase YP_111693.1 2322038 D 272560 CDS YP_111694.1 53722709 3095577 2323068..2324036 1 NC_006351.1 Similar to Xylella fastidiosa UDP-glucose 4-epimerase xf0610 SWALL:Q9PFP7 (EMBL:AE003906) (295 aa) fasta scores: E(): 9.9e-53, 53.71% id in 296 aa, and to Xanthomonas campestris UDP-glucose 4-epimerase Rmd or xcc0608 SWALL:AAM39924 (EMBL:AE012159) (312 aa) fasta scores: E(): 1.3e-49, 50.65% id in 304 aa; UDP-glucose 4-epimerase 2324036 3095577 BPSS1689 Burkholderia pseudomallei K96243 UDP-glucose 4-epimerase YP_111694.1 2323068 D 272560 CDS YP_111695.1 53722710 3095578 complement(2324021..2324401) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2490 SWALL:Q9I0Z2 (EMBL:AE004676) (124 aa) fasta scores: E(): 9.5e-16, 45.71% id in 105 aa, and to Xanthomonas axonopodis hypothetical protein xac0128 SWALL:AAM35020 (EMBL:AE011636) (123 aa) fasta scores: E(): 1.5e-15, 41.52% id in 118 aa; hypothetical protein 2324401 3095578 BPSS1690 Burkholderia pseudomallei K96243 hypothetical protein YP_111695.1 2324021 R 272560 CDS YP_111696.1 53722711 3095378 complement(2324782..2325999) 1 NC_006351.1 catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase 2325999 metZ 3095378 metZ Burkholderia pseudomallei K96243 O-succinylhomoserine sulfhydrylase YP_111696.1 2324782 R 272560 CDS YP_111697.1 53722712 3095844 complement(2326228..2327763) 1 NC_006351.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 2327763 purF 3095844 purF Burkholderia pseudomallei K96243 amidophosphoribosyltransferase YP_111697.1 2326228 R 272560 CDS YP_111698.1 53722713 3096577 complement(2327816..2328310) 1 NC_006351.1 Similar to Ralstonia solanacearum probable colicin V production transmembrane protein CvpA or rsc1977 or rs03551 SWALL:Q8XXY6 (EMBL:AL646067) (165 aa) fasta scores: E(): 1.7e-23, 45.34% id in 161 aa, and to Escherichia coli colicin V production protein CvpA or DedE or b2313 SWALL:CVPA_ECOLI (SWALL:P08550) (162 aa) fasta scores: E(): 1.4e-08, 35% id in 140 aa; bacteriocin production-like protein 2328310 3096577 BPSS1693 Burkholderia pseudomallei K96243 bacteriocin production-like protein YP_111698.1 2327816 R 272560 CDS YP_111699.1 53722714 3095486 complement(2328317..2329057) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1978 or rs03552 SWALL:Q8XXY5 (EMBL:AL646067) (273 aa) fasta scores: E(): 1.9e-08, 40.24% id in 241 aa, and to Salmonella typhimurium paral lipoprotein DedD or stm2364 SWALL:Q8ZNC1 (EMBL:AE008806) (224 aa) fasta scores: E(): 9e-05, 29.59% id in 223 aa; hypothetical protein 2329057 3095486 BPSS1694 Burkholderia pseudomallei K96243 hypothetical protein YP_111699.1 2328317 R 272560 CDS YP_111700.1 53722715 3095339 complement(2329162..2330475) 1 NC_006351.1 Similar to Escherichia coli folc bifunctional protein [includes: folylpolyglutamate synthase; dihydrofolate synthase] FolC or DedC or b2315 SWALL:FOLC_ECOLI (SWALL:P08192) (422 aa) fasta scores: E(): 2.1e-34, 43.02% id in 430 aa, and to Neisseria gonorrhoeae FolC protein SWALL:Q50990 (EMBL:Z68205) (424 aa) fasta scores: E(): 2.3e-74, 50.69% id in 434 aa; folylpolyglutamate synthase/dihydrofolate synthase 2330475 folC 3095339 folC Burkholderia pseudomallei K96243 folylpolyglutamate synthase/dihydrofolate synthase YP_111700.1 2329162 R 272560 CDS YP_111701.1 53722716 3095672 complement(2330587..2331459) 1 NC_006351.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 2331459 accD 3095672 accD Burkholderia pseudomallei K96243 acetyl-CoA carboxylase subunit beta YP_111701.1 2330587 R 272560 CDS YP_111702.1 53722717 3096324 complement(2331539..2332354) 1 NC_006351.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2332354 trpA 3096324 trpA Burkholderia pseudomallei K96243 tryptophan synthase subunit alpha YP_111702.1 2331539 R 272560 CDS YP_111703.1 53722718 3095487 complement(2332398..2333246) 1 NC_006351.1 Similar to Rhodobacter sphaeroides modification methylase RsrIM SWALL:MTR1_RHOSH (SWALL:P14751) (319 aa) fasta scores: E(): 4.1e-25, 38.96% id in 231 aa, and to Bacillus subtilis modification methylase BglIIM SWALL:MTB2_BACSU (SWALL:Q45489) (360 aa) fasta scores: E(): 3.3e-22, 35.03% id in 254 aa; modification methylase 2333246 3095487 BPSS1698 Burkholderia pseudomallei K96243 modification methylase YP_111703.1 2332398 R 272560 CDS YP_111704.1 53722719 3096325 complement(2333256..2334449) 1 NC_006351.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2334449 trpB 3096325 trpB Burkholderia pseudomallei K96243 tryptophan synthase subunit beta YP_111704.1 2333256 R 272560 CDS YP_111705.2 229269499 3096989 complement(2334521..2335282) 1 NC_006351.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 2335282 trpF 3096989 trpF Burkholderia pseudomallei K96243 N-(5'-phosphoribosyl)anthranilate isomerase YP_111705.2 2334521 R 272560 CDS YP_111706.1 53722721 3097109 complement(2335282..2336097) 1 NC_006351.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2336097 truA 3097109 truA Burkholderia pseudomallei K96243 tRNA pseudouridine synthase A YP_111706.1 2335282 R 272560 CDS YP_111707.1 53722722 3095086 complement(2336094..2337227) 1 NC_006351.1 Poor database matches. Alanine rich low complexity protein. Possible C-terminal region of a pseudogene, Possible N-terminal region is BPSS17023; hypothetical protein 2337227 3095086 BPSS1702 Burkholderia pseudomallei K96243 hypothetical protein YP_111707.1 2336094 R 272560 CDS YP_111708.1 53722723 3096958 complement(2337384..2338700) 1 NC_006351.1 Poor database matches. Alanine rich low complexity protein; hypothetical protein 2338700 3096958 BPSS1703 Burkholderia pseudomallei K96243 hypothetical protein YP_111708.1 2337384 R 272560 CDS YP_111709.1 53722724 3097224 complement(2338910..2340031) 1 NC_006351.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 2340031 asd 3097224 asd Burkholderia pseudomallei K96243 aspartate-semialdehyde dehydrogenase YP_111709.1 2338910 R 272560 CDS YP_111710.1 53722725 3094947 complement(2340376..2341443) 1 NC_006351.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2341443 leuB 3094947 leuB Burkholderia pseudomallei K96243 3-isopropylmalate dehydrogenase YP_111710.1 2340376 R 272560 CDS YP_111711.1 53722726 3095029 complement(2341492..2342142) 1 NC_006351.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2342142 leuD 3095029 leuD Burkholderia pseudomallei K96243 isopropylmalate isomerase small subunit YP_111711.1 2341492 R 272560 CDS YP_111712.1 53722727 3096959 complement(2342220..2342363) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri entericidin b precursor ecnb or b4147.2 or c5235 or z5754 or ecs5128.2 or sf4305 SWALL:ECNB_ECOLI (SWALL:P56549) (48 aa) fasta scores: E(): 0.55, 45.23% id in 42 aa; lipoprotein 2342363 3096959 BPSS1706a Burkholderia pseudomallei K96243 lipoprotein YP_111712.1 2342220 R 272560 CDS YP_111713.1 53722728 3095020 complement(2342366..2343775) 1 NC_006351.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2343775 leuC 3095020 leuC Burkholderia pseudomallei K96243 isopropylmalate isomerase large subunit YP_111713.1 2342366 R 272560 CDS YP_111714.1 53722729 3096964 complement(2344167..2345462) 1 NC_006351.1 Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component A NtaA or NmoA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 5.5e-53, 40.04% id in 447 aa, and to Agrobacterium tumefaciens nitrilotriacetate monooxygenase atu3450 or agr_l_2756 SWALL:Q8UAC4 (EMBL:AE009275) (435 aa) fasta scores: E(): 1.7e-54, 37.23% id in 427 aa; nitrilotriacetate monooxygenase 2345462 3096964 BPSS1708 Burkholderia pseudomallei K96243 nitrilotriacetate monooxygenase YP_111714.1 2344167 R 272560 CDS YP_111715.1 53722730 3096708 complement(2345455..2346402) 1 NC_006351.1 hypothetical protein 2346402 3096708 BPSS1709 Burkholderia pseudomallei K96243 hypothetical protein YP_111715.1 2345455 R 272560 CDS YP_111716.1 53722731 3096709 complement(2347122..2347649) 1 NC_006351.1 Similar to Pseudomonas putida bkd operon transcriptional regulator BkdR SWALL:BKDR_PSEPU (SWALL:P42179) (161 aa) fasta scores: E(): 2.5e-45, 76.73% id in 159 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Shigella flexneri, and Enterobacter aerogenes leucine-responsive regulatory protein SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 8.8e-22, 41.44% id in 152 aa; transcription regulator AsnC 2347649 3096709 BPSS1710 Burkholderia pseudomallei K96243 transcription regulator AsnC YP_111716.1 2347122 R 272560 CDS YP_111717.1 53722732 3095727 2347810..2350533 1 NC_006351.1 paralogs to the E1 component of pyruvate dehydrogenase subunit E1; 2-oxoacid dehydrogenase subunit E1 2350533 aceE 3095727 aceE Burkholderia pseudomallei K96243 2-oxoacid dehydrogenase subunit E1 YP_111717.1 2347810 D 272560 CDS YP_111718.1 53722733 3096502 complement(2350787..2352031) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo2976 or y1506 SWALL:Q8ZCK7 (EMBL:AJ414154) (415 aa) fasta scores: E(): 1.2e-95, 57.49% id in 407 aa, and to Escherichia coli hypothetical protein YbiU or b0821 SWALL:YBIU_ECOLI (SWALL:P75791) (421 aa) fasta scores: E(): 3.6e-70, 45.3% id in 415 aa; hypothetical protein 2352031 3096502 BPSS1712 Burkholderia pseudomallei K96243 hypothetical protein YP_111718.1 2350787 R 272560 CDS YP_111719.1 53722734 3096668 complement(2352889..2353278) 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein atu4267 or agr_l_1189 SWALL:Q8U832 (EMBL:AE009355) (134 aa) fasta scores: E(): 4.7e-15, 43.65% id in 126 aa, and to Bradyrhizobium japonicum hypothetical protein blr0519 SWALL:BAC45784 (EMBL:AP005936) (128 aa) fasta scores: E(): 7.4e-14, 44.69% id in 132 aa; hypothetical protein 2353278 3096668 BPSS1713 Burkholderia pseudomallei K96243 hypothetical protein YP_111719.1 2352889 R 272560 CDS YP_111720.1 53722735 3096669 2353354..2354328 1 NC_006351.1 Similar to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4297 or agr_l_1135 SWALL:Q8U802 (EMBL:AE009358) (313 aa) fasta scores: E(): 4.8e-31, 39.72% id in 287 aa, and to Vibrio cholerae transcriptional regulator, AraC/XylS family vc1260 SWALL:Q9KSJ6 (EMBL:AE004205) (299 aa) fasta scores: E(): 3.8e-21, 30.36% id in 303 aa; AraC family transcriptional regulator 2354328 3096669 BPSS1714 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111720.1 2353354 D 272560 CDS YP_111721.1 53722736 3096977 complement(2354425..2355726) 1 NC_006351.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 2355726 gltA 3096977 gltA Burkholderia pseudomallei K96243 type II citrate synthase YP_111721.1 2354425 R 272560 CDS YP_111722.1 53722737 3096676 complement(2355779..2356051) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1992 or rs03560 SWALL:Q8XXX1 (EMBL:AL646067) (95 aa) fasta scores: E(): 4.3e-22, 70.78% id in 89 aa; hypothetical protein 2356051 3096676 BPSS1716 Burkholderia pseudomallei K96243 hypothetical protein YP_111722.1 2355779 R 272560 CDS YP_111723.1 53722738 3095873 complement(2356053..2356754) 1 NC_006351.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2356754 sdhB 3095873 sdhB Burkholderia pseudomallei K96243 succinate dehydrogenase iron-sulfur subunit YP_111723.1 2356053 R 272560 CDS YP_111724.1 53722739 3095867 complement(2356776..2358551) 1 NC_006351.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 2358551 sdhA 3095867 sdhA Burkholderia pseudomallei K96243 succinate dehydrogenase flavoprotein subunit YP_111724.1 2356776 R 272560 CDS YP_111725.1 53722740 3096506 complement(2358556..2358924) 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane succinate dehydrogenase sdhd or rsc1995 or rs03563 SWALL:Q8XXW8 (EMBL:AL646067) (121 aa) fasta scores: E(): 1.2e-35, 71.31% id in 122 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri succinate dehydrogenase hydrophobic membrane anchor protein sdhd or b0722 or c0800 or sf0575 SWALL:DHSD_ECOLI (SWALL:P10445) (115 aa) fasta scores: E(): 1.7e-10, 32.69% id in 104 aa; succinate dehydrogenase 2358924 3096506 BPSS1719 Burkholderia pseudomallei K96243 succinate dehydrogenase YP_111725.1 2358556 R 272560 CDS YP_111726.1 53722741 3096507 complement(2358929..2359345) 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane succinate dehydrogenase SdhC or rsc1996 or rs03564 SWALL:Q8XXW7 (EMBL:AL646067) (140 aa) fasta scores: E(): 1.1e-30, 58.69% id in 138 aa, and to Escherichia coli, and Escherichia coli O157:H7 succinate dehydrogenase cytochrome b-556 subunit SdhC or CybA or b0721 or z0875 or ecs0746 SWALL:DHSC_ECOLI (SWALL:P10446) (129 aa) fasta scores: E(): 7.3e-11, 35.15% id in 128 aa; succinate dehydrogenase cytochrome b-556 subunit 2359345 3096507 BPSS1720 Burkholderia pseudomallei K96243 succinate dehydrogenase cytochrome b-556 subunit YP_111726.1 2358929 R 272560 CDS YP_111727.1 53722742 3097204 complement(2359545..2360345) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsc1997 or rs03565 SWALL:Q8XXW6 (EMBL:AL646067) (274 aa) fasta scores: E(): 4.4e-67, 67.66% id in 266 aa, and to Escherichia coli hypothetical transcriptional regulator YhfR or b3375 SWALL:YHFR_ECOLI (SWALL:P45544) (243 aa) fasta scores: E(): 5.6e-14, 29.49% id in 217 aa; GntR family transcriptional regulator 2360345 3097204 BPSS1721 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_111727.1 2359545 R 272560 CDS YP_111728.1 53722743 3095126 2360644..2361627 1 NC_006351.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 2361627 mdh 3095126 mdh Burkholderia pseudomallei K96243 malate dehydrogenase YP_111728.1 2360644 D 272560 CDS YP_111729.1 53722744 3096700 2361825..2362844 1 NC_006351.1 Similar to Ralstonia solanacearum probable lyase rsc1999 or rs03567 SWALL:Q8XXW4 (EMBL:AL646067) (320 aa) fasta scores: E(): 8.8e-69, 58.17% id in 318 aa, and to Leptospira interrogans citrate lyase, beta subunit CitE or la2841 SWALL:AAN50040 (EMBL:AE011449) (342 aa) fasta scores: E(): 7.8e-59, 47.48% id in 318 aa; lyase 2362844 3096700 BPSS1723 Burkholderia pseudomallei K96243 lyase YP_111729.1 2361825 D 272560 CDS YP_111730.1 53722745 3096701 2363001..2363510 1 NC_006351.1 Similar to Ralstonia solanacearum probable signal peptide protein rsc2001 or rs03569 SWALL:Q8XXW2 (EMBL:AL646067) (185 aa) fasta scores: E(): 6.9e-20, 49.41% id in 170 aa; hypothetical protein 2363510 3096701 BPSS1724 Burkholderia pseudomallei K96243 hypothetical protein YP_111730.1 2363001 D 272560 CDS YP_111731.1 53722746 3095704 2363587..2365038 1 NC_006351.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 2365038 prpD 3095704 prpD Burkholderia pseudomallei K96243 2-methylcitrate dehydratase YP_111731.1 2363587 D 272560 CDS YP_111732.1 53722747 3096598 2365086..2367803 1 NC_006351.1 catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2367803 acnA 3096598 acnA Burkholderia pseudomallei K96243 aconitate hydratase YP_111732.1 2365086 D 272560 CDS YP_111733.1 53722748 3097063 complement(2368050..2370776) 1 NC_006351.1 Similar to the N-terminal region of Bordetella pertussis filamentous hemagglutinin FhaB SWALL:FHAB_BORPE (SWALL:P12255) (3591 aa) fasta scores: E(): 7e-34, 29.76% id in 897 aa, and to Bordetella pertussis Fha protein FhaB2 SWALL:Q8VV99 (EMBL:AJ420989) (3590 aa) fasta scores: E(): 7e-34, 29.76% id in 897 aa; hemagglutinin-like protein 2370776 3097063 BPSS1727 Burkholderia pseudomallei K96243 hemagglutinin-like protein YP_111733.1 2368050 R 272560 CDS YP_111734.1 53722749 3095194 complement(2370877..2372568) 1 NC_006351.1 Similar to Proteus mirabilis hemolysin activator protein precursor HpmB SWALL:HLYB_PROMI (SWALL:P16465) (561 aa) fasta scores: E(): 2.6e-21, 25.86% id in 549 aa, and to Bordetella pertussis hemolysin activator-like protein FhaC precursor SWALL:FHAC_BORPE (SWALL:P35077) (584 aa) fasta scores: E(): 1.9e-53, 33.15% id in 567 aa; secretion/activator protein 2372568 3095194 BPSS1728 Burkholderia pseudomallei K96243 secretion/activator protein YP_111734.1 2370877 R 272560 CDS YP_111735.1 53722750 3095041 complement(2373847..2375931) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable cytochrome C pa4571 SWALL:Q9HVL3 (EMBL:AE004870) (675 aa) fasta scores: E(): 1.6e-102, 64.84% id in 694 aa, and to Acetobacter polyoxogenes, and Acetobacter europaeus alcohol dehydrogenase cytochrome C subunit precursor AdhB SWALL:CYCA_ACEPO (SWALL:Q03318) (468 aa) fasta scores: E(): 4.8e-59, 42.85% id in 413 aa; cytochrome C 2375931 3095041 BPSS1729 Burkholderia pseudomallei K96243 cytochrome C YP_111735.1 2373847 R 272560 CDS YP_111736.1 53722751 3094942 complement(2376418..2376789) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0612 or rs03755 SWALL:Q8XS69 (EMBL:AL646079) (122 aa) fasta scores: E(): 7.3e-28, 67.76% id in 121 aa, and to Pseudomonas aeruginosa hypothetical protein pa3386 SWALL:Q9HYL6 (EMBL:AE004760) (121 aa) fasta scores: E(): 0.0026, 35% id in 120 aa; hypothetical protein 2376789 3094942 BPSS1730 Burkholderia pseudomallei K96243 hypothetical protein YP_111736.1 2376418 R 272560 CDS YP_111737.1 53722752 3094943 complement(2377103..2378716) 1 NC_006351.1 Similar to Aspergillus oryzae tyrosinase MelO SWALL:TYRO_ASPOR (SWALL:Q00234) (539 aa) fasta scores: E(): 4.6e-35, 41.49% id in 535 aa, and to Agaricus bisporus tyrosinase Ppo2 SWALL:TYRO_AGABI (SWALL:O42713) (556 aa) fasta scores: E(): 2.1e-05, 28.1% id in 395 aa; pigment biosynthesis-related tyrosinase 2378716 3094943 BPSS1731 Burkholderia pseudomallei K96243 pigment biosynthesis-related tyrosinase YP_111737.1 2377103 R 272560 CDS YP_111738.1 53722753 3095058 complement(2379008..2379637) 1 NC_006351.1 hypothetical protein 2379637 3095058 BPSS1732 Burkholderia pseudomallei K96243 hypothetical protein YP_111738.1 2379008 R 272560 CDS YP_111739.1 53722754 3095120 2380632..2380766 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane protein rsp1646 or rs02205 SWALL:Q8XPJ4 (EMBL:AL646086) (44 aa) fasta scores: E(): 5.2e-12, 68.18% id in 44 aa; hypothetical protein 2380766 3095120 BPSS1733 Burkholderia pseudomallei K96243 hypothetical protein YP_111739.1 2380632 D 272560 CDS YP_111740.1 53722755 3095121 2381113..2382861 1 NC_006351.1 Similar to Pseudomonas sp. pseudomonapepsin precursor Pcp SWALL:PICP_PSESR (SWALL:P42790) (587 aa) fasta scores: E(): 1.1e-143, 67.53% id in 579 aa, and to Xanthomonas sp. xanthomonapepsin precursor SWALL:XANP_XANS2 (SWALL:Q60106) (827 aa) fasta scores: E(): 4.4e-33, 43.66% id in 616 aa; sedolisin 2382861 3095121 BPSS1734 Burkholderia pseudomallei K96243 sedolisin YP_111740.1 2381113 D 272560 CDS YP_111741.1 53722756 3095267 complement(2382956..2383795) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1731 or rs02919 SWALL:Q8XYM7 (EMBL:AL646066) (272 aa) fasta scores: E(): 4.3e-87, 86.76% id in 272 aa, and to Yersinia pestis ABC transporter permease ypo2841 SWALL:Q8ZCW7 (EMBL:AJ414154) (282 aa) fasta scores: E(): 7.7e-54, 56.56% id in 274 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; ABC transporter membrane protein 2383795 3095267 BPSS1735 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_111741.1 2382956 R 272560 CDS YP_111742.1 53722757 3095980 complement(2383826..2385094) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transport system permease transmembrane protein rsc1732 or rs02920 SWALL:Q8XYM6 (EMBL:AL646066) (420 aa) fasta scores: E(): 1.2e-125, 80.52% id in 416 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa0605 SWALL:Q9I5T3 (EMBL:AE004497) (415 aa) fasta scores: E(): 8.9e-92, 59.33% id in 423 aa; ABC transporter membrane protein 2385094 3095980 BPSS1736 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_111742.1 2383826 R 272560 CDS YP_111743.1 53722758 3095981 complement(2385186..2386232) 1 NC_006351.1 Similar to Ralstonia solanacearum lipoprotein signal peptide rsc1733 or rs02921 SWALL:Q8XYM5 (EMBL:AL646066) (346 aa) fasta scores: E(): 2.4e-116, 86.09% id in 338 aa, and to Pseudomonas putida polyamine ABC transporter periplasmic polyamine-binding protein pp0412 SWALL:AAN66042 (EMBL:AE016775) (344 aa) fasta scores: E(): 2.2e-84, 62.09% id in 343 aa; ABC transporter exported protein 2386232 3095981 BPSS1737 Burkholderia pseudomallei K96243 ABC transporter exported protein YP_111743.1 2385186 R 272560 CDS YP_111744.1 53722759 3095673 complement(2386307..2387407) 1 NC_006351.1 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1734 or rs02922 SWALL:Q8XYM4 (EMBL:AL646066) (363 aa) fasta scores: E(): 1.8e-102, 80.82% id in 365 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa0603 SWALL:Q9I5T5 (EMBL:AE004496) (369 aa) fasta scores: E(): 2e-69, 59.94% id in 362 aa; ABC transport system ATP-binding protein 2387407 3095673 BPSS1738 Burkholderia pseudomallei K96243 ABC transport system ATP-binding protein YP_111744.1 2386307 R 272560 CDS YP_111745.1 53722760 3097070 2387516..2389045 1 NC_006351.1 Similar to Ralstonia solanacearum transcription regulator protein rsc0030 or rs01853 SWALL:Q8Y3F0 (EMBL:AL646057) (509 aa) fasta scores: E(): 2e-107, 57.08% id in 501 aa, and to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 6.7e-52, 38.54% id in 480 aa; GntR family transcriptional regulator 2389045 3097070 BPSS1739 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_111745.1 2387516 D 272560 CDS YP_111746.1 53722761 3095162 complement(2389152..2390186) 1 NC_006351.1 acts as a molecular chaperone to fold and export lipase A; lipase chaperone 2390186 lipB 3095162 lipB Burkholderia pseudomallei K96243 lipase chaperone YP_111746.1 2389152 R 272560 CDS YP_111747.1 53722762 3095030 complement(2390190..2391284) 1 NC_006351.1 Similar to Burkholderia cepacia lipase precursor LipA SWALL:LIP_BURCE (SWALL:P22088) (364 aa) fasta scores: E(): 7.1e-111, 84.34% id in 364 aa, and to Pseudomonas sp. Lipase precursor Lip SWALL:LIP_PSES5 (SWALL:P25275) (364 aa) fasta scores: E(): 4.2e-110, 83.79% id in 364 aa; lipase precursor 2391284 lipA1 3095030 lipA1 Burkholderia pseudomallei K96243 lipase precursor YP_111747.1 2390190 R 272560 CDS YP_111748.1 53722763 3097071 complement(2391608..2393857) 1 NC_006351.1 Similar to Pseudomonas putida outer membrane copper receptor OprC or pp4838 SWALL:AAN70407 (EMBL:AE016792) (688 aa) fasta scores: E(): 5.8e-81, 59.23% id in 655 aa, and to Pseudomonas stutzeri outer membrane protein NosA SWALL:Q8KLV2 (EMBL:AJ507426) (719 aa) fasta scores: E(): 9e-71, 49.48% id in 675 aa; outer membrane copper receptor 2393857 3097071 BPSS1742 Burkholderia pseudomallei K96243 outer membrane copper receptor YP_111748.1 2391608 R 272560 CDS YP_111749.1 53722764 3097168 complement(2393945..2394340) 1 NC_006351.1 hypothetical protein 2394340 3097168 BPSS1743 Burkholderia pseudomallei K96243 hypothetical protein YP_111749.1 2393945 R 272560 CDS YP_111750.1 53722765 3097263 complement(2394501..2395037) 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri cytochrome b561 CybB or b1418 or sf1794 SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 5e-16, 34.7% id in 170 aa, and to Pseudomonas aeruginosa cytochrome b561 pa0918 SWALL:Q9I539 (EMBL:AE004526) (182 aa) fasta scores: E(): 1.9e-22, 41.86% id in 172 aa; cytochrome b561 2395037 3097263 BPSS1744 Burkholderia pseudomallei K96243 cytochrome b561 YP_111750.1 2394501 R 272560 CDS YP_111751.1 53722766 3097264 2395306..2395941 1 NC_006351.1 Similar to Caulobacter crescentus hypothetical protein cc3427 SWALL:Q9A2X9 (EMBL:AE006002) (218 aa) fasta scores: E(): 4.5e-10, 35.36% id in 164 aa, and to Streptomyces coelicolor integral membrane regulator sco3583 or sch66.04 SWALL:Q9X936 (EMBL:AL939117) (254 aa) fasta scores: E(): 8.3e-08, 33.33% id in 219 aa; hypothetical protein 2395941 3097264 BPSS1745 Burkholderia pseudomallei K96243 hypothetical protein YP_111751.1 2395306 D 272560 CDS YP_111752.1 53722767 3097222 complement(2396072..2396836) 1 NC_006351.1 Similar to Coxiella burnetii lipoprotein precursor NlpD SWALL:Q9KI20 (EMBL:AF244357) (230 aa) fasta scores: E(): 9e-17, 37.91% id in 240 aa, and to Pseudomonas aeruginosa lipoprotein NlpD/LppB homolog precursor pa3623 SWALL:NLPD_PSEAE (SWALL:P45682) (297 aa) fasta scores: E(): 6.8e-14, 36.53% id in 271 aa; lipoprotein 2396836 3097222 BPSS1746 Burkholderia pseudomallei K96243 lipoprotein YP_111752.1 2396072 R 272560 CDS YP_111753.1 53722768 3095783 complement(2397116..2397433) 1 NC_006351.1 Similar to Neisseria meningitidis hypothetical protein nma0001 SWALL:Q9JX93 (EMBL:AL162752) (106 aa) fasta scores: E(): 1.1e-27, 68.62% id in 102 aa, and to Pseudomonas aeruginosa hypothetical protein pa2490 SWALL:Q9I0Z2 (EMBL:AE004676) (124 aa) fasta scores: E(): 0.00015, 31.19% id in 109 aa; hypothetical protein 2397433 3095783 BPSS1747 Burkholderia pseudomallei K96243 hypothetical protein YP_111753.1 2397116 R 272560 CDS YP_111754.1 53722769 3095784 complement(2397872..2398204) 1 NC_006351.1 hypothetical protein 2398204 3095784 BPSS1748 Burkholderia pseudomallei K96243 hypothetical protein YP_111754.1 2397872 R 272560 CDS YP_111755.1 53722770 3097024 complement(2398403..2399818) 1 NC_006351.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 2399818 gnd 3097024 gnd Burkholderia pseudomallei K96243 6-phosphogluconate dehydrogenase YP_111755.1 2398403 R 272560 CDS YP_111756.1 53722771 3097194 complement(2400273..2400887) 1 NC_006351.1 Similar to Anabaena sp. hypothetical protein all0385 SWALL:Q8YZS2 (EMBL:AP003582) (210 aa) fasta scores: E(): 7e-37, 51.72% id in 203 aa, and to Synechocystis sp. hypothetical protein slr0065 SWALL:Q55157 (EMBL:D64001) (212 aa) fasta scores: E(): 2.1e-35, 49.75% id in 201 aa; hypothetical protein 2400887 3097194 BPSS1750 Burkholderia pseudomallei K96243 hypothetical protein YP_111756.1 2400273 R 272560 CDS YP_111757.1 53722772 3096048 complement(2400913..2401851) 1 NC_006351.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2401851 3096048 BPSS1751 Burkholderia pseudomallei K96243 NAD-dependent deacetylase YP_111757.1 2400913 R 272560 CDS YP_111758.1 53722773 3096049 complement(2401848..2403272) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transporter pa5099 SWALL:Q9HU84 (EMBL:AE004922) (480 aa) fasta scores: E(): 2.1e-121, 67.79% id in 472 aa, and to Bacillus subtilis homologous to purine-cytosine permease YxlA SWALL:P94369 (EMBL:D83026) (457 aa) fasta scores: E(): 2.8e-59, 39.47% id in 461 aa; transport-related, membrane protein 2403272 3096049 BPSS1752 Burkholderia pseudomallei K96243 transport-related, membrane protein YP_111758.1 2401848 R 272560 CDS YP_111759.1 53722774 3096059 2403909..2404769 1 NC_006351.1 hypothetical protein 2404769 3096059 BPSS1753 Burkholderia pseudomallei K96243 hypothetical protein YP_111759.1 2403909 D 272560 CDS YP_111760.1 53722775 3096686 2404833..2405999 1 NC_006351.1 Similar to Methanosarcina mazei conserved protein mm0534 SWALL:AAM30230 (EMBL:AE013279) (391 aa) fasta scores: E(): 1.2e-23, 27.13% id in 387 aa, and to Rhizobium loti hypothetical protein mll7337 SWALL:Q986I8 (EMBL:AP003011) (398 aa) fasta scores: E(): 5.6e-22, 35.05% id in 388 aa. Possible alternative translational start site; hypothetical protein 2405999 3096686 BPSS1754 Burkholderia pseudomallei K96243 hypothetical protein YP_111760.1 2404833 D 272560 CDS YP_111761.1 53722776 3096687 complement(2406884..2408926) 1 NC_006351.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 2408926 3096687 BPSS1755 Burkholderia pseudomallei K96243 RNA polymerase sigma factor RpoD YP_111761.1 2406884 R 272560 CDS YP_111762.1 53722777 3096768 complement(2409370..2411244) 1 NC_006351.1 synthesizes RNA primers at the replication forks; DNA primase 2411244 dnaG 3096768 dnaG Burkholderia pseudomallei K96243 DNA primase YP_111762.1 2409370 R 272560 CDS YP_111763.1 53722778 3096576 complement(2411338..2411784) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc2217 or rs01382 SWALL:Q8XX99 (EMBL:AL646068) (149 aa) fasta scores: E(): 1.9e-33, 77.55% id in 147 aa, and to Bacillus subtilis hypothetical protein YqeY SWALL:YQEY_BACSU (SWALL:P54464) (148 aa) fasta scores: E(): 9.7e-14, 37.16% id in 148 aa; hypothetical protein 2411784 3096576 BPSS1757 Burkholderia pseudomallei K96243 hypothetical protein YP_111763.1 2411338 R 272560 CDS YP_111764.1 53722779 3095644 complement(2411951..2412163) 1 NC_006351.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2412163 rpsU 3095644 rpsU Burkholderia pseudomallei K96243 30S ribosomal protein S21 YP_111764.1 2411951 R 272560 CDS YP_111765.1 53722780 3095896 complement(2412243..2413466) 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical protein r00707 or smc00763 SWALL:Q92RY0 (EMBL:AL591784) (394 aa) fasta scores: E(): 2.8e-77, 55.16% id in 397 aa, and to Escherichia coli hypothetical protein YhiN or b3492 SWALL:YHIN_ECOLI (SWALL:P37631) (400 aa) fasta scores: E(): 1.2e-68, 48.47% id in 394 aa; hypothetical protein 2413466 3095896 BPSS1759 Burkholderia pseudomallei K96243 hypothetical protein YP_111765.1 2412243 R 272560 CDS YP_111766.1 53722781 3095273 2413606..2414646 1 NC_006351.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 2414646 gcp 3095273 gcp Burkholderia pseudomallei K96243 DNA-binding/iron metalloprotein/AP endonuclease YP_111766.1 2413606 D 272560 CDS YP_111767.1 53722782 3095897 complement(2415068..2415877) 1 NC_006351.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase 2415877 3095897 BPSS1761 Burkholderia pseudomallei K96243 GTP cyclohydrolase YP_111767.1 2415068 R 272560 CDS YP_111768.1 53722783 3096803 complement(2416028..2417932) 1 NC_006351.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2417932 dxs 3096803 dxs Burkholderia pseudomallei K96243 1-deoxy-D-xylulose-5-phosphate synthase YP_111768.1 2416028 R 272560 CDS YP_111769.1 53722784 3095022 complement(2418016..2418900) 1 NC_006351.1 Similar to Escherichia coli geranyltranstransferase IspA or b0421 SWALL:ISPA_ECOLI (SWALL:P22939) (299 aa) fasta scores: E(): 6.8e-41, 45.97% id in 298 aa, and to Salmonella typhi geranyltranstransferase sty0462 SWALL:Q8Z8X2 (EMBL:AL627266) (299 aa) fasta scores: E(): 1.5e-42, 46.98% id in 298 aa; geranyltranstransferase 2418900 ispA 3095022 ispA Burkholderia pseudomallei K96243 geranyltranstransferase YP_111769.1 2418016 R 272560 CDS YP_111770.1 53722785 3096525 complement(2418897..2419190) 1 NC_006351.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 2419190 xseB 3096525 xseB Burkholderia pseudomallei K96243 exodeoxyribonuclease VII small subunit YP_111770.1 2418897 R 272560 CDS YP_111771.1 53722786 3096723 2419460..2420566 1 NC_006351.1 Similar to the eukaryotic Beta vulgaris choline monooxygenase, chloroplast precursor Cmo SWALL:CHMO_BETVU (SWALL:O22553) (446 aa) fasta scores: E(): 6e-12, 25.75% id in 365 aa, and to Ralstonia solanacearum probable dioxygenase rsc2224 or rs01375 SWALL:Q8XX92 (EMBL:AL646068) (365 aa) fasta scores: E(): 2e-115, 73.55% id in 363 aa; osmotic adaptation-related protein 2420566 3096723 BPSS1765 Burkholderia pseudomallei K96243 osmotic adaptation-related protein YP_111771.1 2419460 D 272560 CDS YP_111772.1 53722787 3096362 2420714..2421583 1 NC_006351.1 Similar to Escherichia coli 3-mercaptopyruvate sulfurtransferase SseA or b2521 SWALL:THTM_ECOLI (SWALL:P31142) (280 aa) fasta scores: E(): 3.6e-21, 33.09% id in 284 aa, and to Pseudomonas aeruginosa probable 3-mercaptopyruvate sulfurtransferase pa1292 SWALL:THTM_PSEAE (SWALL:Q9I452) (284 aa) fasta scores: E(): 1.5e-49, 50.17% id in 281 aa; sulfurtransferase (cyanide detoxification) 2421583 3096362 BPSS1766 Burkholderia pseudomallei K96243 sulfurtransferase (cyanide detoxification) YP_111772.1 2420714 D 272560 CDS YP_111773.1 53722788 3096363 complement(2421642..2422517) 1 NC_006351.1 Similar to Pseudomonas putida, and Pseudomonas sp. carboxymethylenebutenolidase ClcD SWALL:CLCD_PSEPU (SWALL:P11453) (236 aa) fasta scores: E(): 4e-07, 28.07% id in 228 aa, and to Escherichia coli carboxymethylenebutenolidase YsgA or b3830 SWALL:DLHH_ECOLI (SWALL:P56262) (271 aa) fasta scores: E(): 3.6e-52, 52.65% id in 264 aa; carboxymethylenebutenolidase 2422517 3096363 BPSS1767 Burkholderia pseudomallei K96243 carboxymethylenebutenolidase YP_111773.1 2421642 R 272560 CDS YP_111774.1 53722789 3096026 2423237..2425030 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp1080 or rs02587 SWALL:Q8XQY8 (EMBL:AL646082) (541 aa) fasta scores: E(): 1.6e-38, 33.68% id in 576 aa, and to Rhizobium loti hypothetical protein mll7595 SWALL:Q985N8 (EMBL:AP003012) (589 aa) fasta scores: E(): 1.4e-28, 28.31% id in 611 aa; hypothetical protein 2425030 3096026 BPSS1768 Burkholderia pseudomallei K96243 hypothetical protein YP_111774.1 2423237 D 272560 CDS YP_111775.1 53722790 3097258 complement(2425270..2426652) 1 NC_006351.1 Similar to Escherichia coli NADH dehydrogenase Ndh or b1109 SWALL:DHNA_ECOLI (SWALL:P00393) (433 aa) fasta scores: E(): 9.1e-23, 45.43% id in 460 aa, and to Ralstonia solanacearum probable NADH dehydrogenase, membrane flavoprotein FAD NAD ubiquinone electron transport oxidoreductase Ndh or rsc2229 or rs01370 SWALL:Q8XX87 (EMBL:AL646069) (441 aa) fasta scores: E(): 3.1e-68, 62.66% id in 458 aa; NADH dehydrogenase 2426652 ndh 3097258 ndh Burkholderia pseudomallei K96243 NADH dehydrogenase YP_111775.1 2425270 R 272560 CDS YP_111776.1 53722791 3095629 complement(2426971..2429742) 1 NC_006351.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 2429742 polA 3095629 polA Burkholderia pseudomallei K96243 DNA polymerase I YP_111776.1 2426971 R 272560 CDS YP_111777.1 53722792 3096490 2429831..2430493 1 NC_006351.1 Similar to Neisseria meningitidis hypothetical protein nma2204 SWALL:Q9JSP2 (EMBL:AL162758) (210 aa) fasta scores: E(): 2.9e-35, 54.77% id in 199 aa, and to Corynebacterium glutamicum predicted Rossmann fold nucleotide-binding protein cgl1110 SWALL:BAB98503 (EMBL:AP005277) (256 aa) fasta scores: E(): 2.6e-34, 48.46% id in 196 aa; decarboxylase 2430493 3096490 BPSS1771 Burkholderia pseudomallei K96243 decarboxylase YP_111777.1 2429831 D 272560 CDS YP_111778.1 53722793 3096491 2430911..2431195 1 NC_006351.1 Similar to Ralstonia solanacearum probable signal peptide protein rsp0708 or rs01741 SWALL:Q8XRX3 (EMBL:AL646080) (106 aa) fasta scores: E(): 4.1e-05, 42.04% id in 88 aa, and to Bordetella pertussis Vrg-6 SWALL:Q45395 (EMBL:M77374) (105 aa) fasta scores: E(): 0.14, 40.59% id in 101 aa; hypothetical protein 2431195 3096491 BPSS1772 Burkholderia pseudomallei K96243 hypothetical protein YP_111778.1 2430911 D 272560 CDS YP_111779.1 53722794 3096086 2431845..2432336 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical protein r00856 or smc00850 SWALL:Q92RL1 (EMBL:AL591785) (172 aa) fasta scores: E(): 4.6e-28, 53.12% id in 160 aa, and to Ralstonia solanacearum hypothetical protein rsc1374 or rs04657 SWALL:Q8XZM1 (EMBL:AL646064) (173 aa) fasta scores: E(): 3.2e-26, 50.62% id in 160 aa; hypothetical protein 2432336 3096086 BPSS1773 Burkholderia pseudomallei K96243 hypothetical protein YP_111779.1 2431845 D 272560 CDS YP_111780.1 53722795 3096649 complement(2433214..2434440) 1 NC_006351.1 hypothetical protein 2434440 3096649 BPSS1774 Burkholderia pseudomallei K96243 hypothetical protein YP_111780.1 2433214 R 272560 CDS YP_111781.1 53722796 3095963 complement(2436429..2437955) 1 NC_006351.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 2437955 amn 3095963 amn Burkholderia pseudomallei K96243 AMP nucleosidase YP_111781.1 2436429 R 272560 CDS YP_111782.1 53722797 3096631 2438111..2438509 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane protein rsc2232 or rs01367 SWALL:Q8XX84 (EMBL:AL646069) (139 aa) fasta scores: E(): 4.8e-07, 38.06% id in 134 aa; hypothetical protein 2438509 3096631 BPSS1778 Burkholderia pseudomallei K96243 hypothetical protein YP_111782.1 2438111 D 272560 CDS YP_111783.1 53722798 3096847 2438603..2439598 1 NC_006351.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 2439598 thrB 3096847 thrB Burkholderia pseudomallei K96243 homoserine kinase YP_111783.1 2438603 D 272560 CDS YP_111784.1 53722799 3097056 2439589..2440401 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc2234 or rs01365 SWALL:Q8XX82 (EMBL:AL646069) (265 aa) fasta scores: E(): 2e-41, 45.92% id in 270 aa; hypothetical protein 2440401 3097056 BPSS1780 Burkholderia pseudomallei K96243 hypothetical protein YP_111784.1 2439589 D 272560 CDS YP_111785.1 53722800 3096256 2440904..2441356 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2849 SWALL:Q9HZZ4 (EMBL:AE004711) (151 aa) fasta scores: E(): 1.8e-24, 53.24% id in 154 aa, and to Brucella suis transcriptional regulator, MarR family bra0886 SWALL:AAN34058 (EMBL:AE014582) (151 aa) fasta scores: E(): 1.7e-23, 52.02% id in 148 aa; MarR family transcriptional regulator 2441356 3096256 BPSS1781 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_111785.1 2440904 D 272560 CDS YP_111786.1 53722801 3097161 2441494..2441913 1 NC_006351.1 Similar to Xanthomonas axonopodis organic hydroperoxide resistance protein Ohr or xac0282 SWALL:OHR_XANAC (SWALL:O68390) (142 aa) fasta scores: E(): 2.1e-31, 62.04% id in 137 aa, and to Pseudomonas putida organic hydroperoxide resistance protein Ohr or pp1859 SWALL:AAN67478 (EMBL:AE016780) (142 aa) fasta scores: E(): 1.5e-33, 67.4% id in 135 aa; organic hydroperoxide resistance protein 2441913 ohr 3097161 ohr Burkholderia pseudomallei K96243 organic hydroperoxide resistance protein YP_111786.1 2441494 D 272560 CDS YP_111787.1 53722802 3096257 complement(2442026..2442184) 1 NC_006351.1 hypothetical protein 2442184 3096257 BPSS1783 Burkholderia pseudomallei K96243 hypothetical protein YP_111787.1 2442026 R 272560 CDS YP_111788.1 53722803 3096172 complement(2442281..2443327) 1 NC_006351.1 Similar to Rhizobium loti polyhydroxybutyrate depolymerase mlr2444 SWALL:Q98IE0 (EMBL:AP002999) (371 aa) fasta scores: E(): 1.5e-18, 30.4% id in 296 aa, and to Pseudomonas lemoignei poly(3-hydroxyalkanoate) depolymerase C precursor PhaZ1 SWALL:PHA1_PSELE (SWALL:P52090) (414 aa) fasta scores: E(): 1.4e-15, 30.23% id in 258 aa; depolymerase 2443327 3096172 BPSS1784 Burkholderia pseudomallei K96243 depolymerase YP_111788.1 2442281 R 272560 CDS YP_111789.1 53722804 3096771 2443689..2444378 1 NC_006351.1 Similar to Aeromonas hydrophila hypothetical 28.2 kDa protein SWALL:Q9X647 (EMBL:AF131869) (264 aa) fasta scores: E(): 2e-19, 36.12% id in 227 aa, and to Klebsiella pneumoniae hypothetical 22.5 kDa protein in cps region SWALL:YC02_KLEPN (SWALL:Q48448) (209 aa) fasta scores: E(): 2.5e-14, 32.16% id in 199 aa; hypothetical protein 2444378 3096771 BPSS1785 Burkholderia pseudomallei K96243 hypothetical protein YP_111789.1 2443689 D 272560 CDS YP_111790.1 53722805 3096772 2444947..2445747 1 NC_006351.1 Similar to Ralstonia solanacearum molybdate-binding periplasmic signal peptide protein rsp0106 or rs06057 SWALL:Q8XTK2 (EMBL:AL646076) (257 aa) fasta scores: E(): 9.3e-52, 62.64% id in 257 aa, and to Methanosarcina acetivorans molybdenum ABC transporter solute-binding protein ma2280 SWALL:Q8TNK5 (EMBL:AE010915) (274 aa) fasta scores: E(): 5.8e-35, 48.3% id in 236 aa, and to Escherichia coli molybdate-binding periplasmic protein precursor ModA or b0763 SWALL:MODA_ECOLI (SWALL:P37329) (257 aa) fasta scores: E(): 1.2e-20, 36.11% id in 252 aa; molybdenum transport-related, exported protein 2445747 3096772 BPSS1786 Burkholderia pseudomallei K96243 molybdenum transport-related, exported protein YP_111790.1 2444947 D 272560 CDS YP_111791.1 53722806 3095605 2445760..2446434 1 NC_006351.1 Similar to Methanosarcina acetivorans molybdenum ABC transporter permease ModB or ma2281 SWALL:Q8TNK4 (EMBL:AE010915) (225 aa) fasta scores: E(): 3.1e-35, 48.83% id in 215 aa, and to Escherichia coli, and Escherichia coli O157:H7 molybdenum transport system permease ModB or ChlJ or b0764 or z0934 or ecs0792 SWALL:MODB_ECOLI (SWALL:P09834) (229 aa) fasta scores: E(): 6e-31, 45% id in 220 aa; molybdenum transport-related membrane protein 2446434 3095605 BPSS1787 Burkholderia pseudomallei K96243 molybdenum transport-related membrane protein YP_111791.1 2445760 D 272560 CDS YP_111792.1 53722807 3096898 2446436..2447137 1 NC_006351.1 Similar to Methanosarcina acetivorans molydbenum ABC transporter ATP-binding protein ModC or ma2282 SWALL:Q8TNK3 (EMBL:AE010915) (383 aa) fasta scores: E(): 1.7e-27, 44.15% id in 231 aa, and to Mycobacterium tuberculosis molybdenum transport ATP-binding protein ModC or rv1859 or mt1907 or mtcy359.14 SWALL:MODC_MYCTU (SWALL:P95155) (369 aa) fasta scores: E(): 2.9e-23, 43.77% id in 217 aa; molybdenum transport-related, ATP-binding protein 2447137 3096898 BPSS1788 Burkholderia pseudomallei K96243 molybdenum transport-related, ATP-binding protein YP_111792.1 2446436 D 272560 CDS YP_111793.1 53722808 3096486 complement(2447680..2448468) 1 NC_006351.1 Similar to Azotobacter vinelandii molybdenum transport protein ModE or ModA SWALL:MODE_AZOVI (SWALL:P37733) (270 aa) fasta scores: E(): 2.2e-34, 50.6% id in 249 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri transcriptional regulator ModE or ModR or b0761 or z0931 or ecs0789 or sf0543 SWALL:MODE_ECOLI (SWALL:P46930) (262 aa) fasta scores: E(): 2.2e-23, 40.16% id in 244 aa; molybdenum transport protein 2448468 modE 3096486 modE Burkholderia pseudomallei K96243 molybdenum transport protein YP_111793.1 2447680 R 272560 CDS YP_111794.1 53722809 3096899 complement(2448563..2450620) 1 NC_006351.1 C-terminal region is similar to Caulobacter crescentus hypothetical protein cc3522 SWALL:Q9A2N4 (EMBL:AE006010) (509 aa) fasta scores: E(): 1.1e-13, 31.79% id in 519 aa, and to Rhizobium loti hypothetical protein mll9114 SWALL:Q982E5 (EMBL:AP003015) (500 aa) fasta scores: E(): 0.00016, 28.97% id in 421 aa; hypothetical protein 2450620 3096899 BPSS1790 Burkholderia pseudomallei K96243 hypothetical protein YP_111794.1 2448563 R 272560 CDS YP_111795.1 53722810 3095357 complement(2450683..2451066) 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein sco1037 or scg20a.17 SWALL:Q9K3M3 (EMBL:AL939107) (133 aa) fasta scores: E(): 4.5e-12, 40.62% id in 128 aa, and to Bacillus subtilis hypothetical protein YrdN SWALL:YRDN_BACSU (SWALL:P94502) (129 aa) fasta scores: E(): 4.6e-11, 34.64% id in 127 aa; hypothetical protein 2451066 3095357 BPSS1791 Burkholderia pseudomallei K96243 hypothetical protein YP_111795.1 2450683 R 272560 CDS YP_111796.1 53722811 3096139 2451164..2452039 1 NC_006351.1 Similar to Erwinia chrysanthemi pectinase gene transcriptional regulator PecT SWALL:PECT_ERWCH (SWALL:P52662) (316 aa) fasta scores: E(): 1e-16, 33.84% id in 260 aa, to Agrobacterium tumefaciens transcriptional regulator, LysR family HexA or atu3987 or agr_l_1733 SWALL:Q8U8V1 (EMBL:AE009329) (293 aa) fasta scores: E(): 1.1e-42, 49.64% id in 278 aa, and to Rhizobium loti transcriptional regulator mlr5687 SWALL:Q98B84 (EMBL:AP003007) (302 aa) fasta scores: E(): 3.9e-38, 47.42% id in 272 aa; LysR family transcriptional regulator 2452039 3096139 BPSS1792 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111796.1 2451164 D 272560 CDS YP_111797.1 53722812 3096140 2452106..2453026 1 NC_006351.1 Similar to Clostridium acetobutylicum predicted permease cac0076 SWALL:Q97MW5 (EMBL:AE007520) (303 aa) fasta scores: E(): 2e-43, 41.05% id in 285 aa, and to Brucella suis membrane protein, br1507 SWALL:AAN30418 (EMBL:AE014445) (303 aa) fasta scores: E(): 2.1e-30, 35.78% id in 299 aa; hypothetical protein 2453026 3096140 BPSS1793 Burkholderia pseudomallei K96243 hypothetical protein YP_111797.1 2452106 D 272560 CDS YP_111798.1 53722813 3097193 2453119..2453898 1 NC_006351.1 Similar to parts of Ralstonia solanacearum probable composite two-component regulatory rsp1676 or rs02235 SWALL:Q8XPG5 (EMBL:AL646086) (796 aa) fasta scores: E(): 1e-19, 34.13% id in 249 aa, and of Anabaena sp. two-component hybrid sensor and regulator alr3442 SWALL:Q8YRK4 (EMBL:AP003593) (865 aa) fasta scores: E(): 3.8e-13, 29.43% id in 248 aa; hypothetical protein 2453898 3097193 BPSS1794 Burkholderia pseudomallei K96243 hypothetical protein YP_111798.1 2453119 D 272560 CDS YP_111799.1 53722814 3097205 2453984..2455324 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5362 SWALL:Q9HTJ8 (EMBL:AE004948) (446 aa) fasta scores: E(): 2.8e-73, 51.38% id in 432 aa, and to Xanthomonas campestris hypothetical protein xcc1493 SWALL:AAM40789 (EMBL:AE012250) (454 aa) fasta scores: E(): 1.1e-41, 47.81% id in 435 aa, and to Bacillus subtilis hypothetical protein YhdP SWALL:YHDP_BACSU (SWALL:O07585) (444 aa) fasta scores: E(): 5e-37, 30.13% id in 438 aa; hypothetical protein 2455324 3097205 BPSS1795 Burkholderia pseudomallei K96243 hypothetical protein YP_111799.1 2453984 D 272560 CDS YP_111800.1 53722815 3097206 2455360..2455950 1 NC_006351.1 Similar to Ralstonia solanacearum thiamine-phosphate pyrophosphorylase ThiE2 or rsp0984 or rs02315 SWALL:Q8XR75 (EMBL:AL646082) (198 aa) fasta scores: E(): 4.6e-24, 44.79% id in 192 aa, and to Streptococcus pneumoniae, and Streptococcus pneumoniae probable thiamine-phosphate pyrophosphorylase 2 ThiE2 or ThiE or sp0725 or spr0637 SWALL:THE2_STRPN (SWALL:Q97RR8) (210 aa) fasta scores: E(): 9.8e-08, 29.41% id in 170 aa; hypothetical protein 2455950 3097206 BPSS1796 Burkholderia pseudomallei K96243 hypothetical protein YP_111800.1 2455360 D 272560 CDS YP_111801.1 53722816 3096087 complement(2456109..2457752) 1 NC_006351.1 Similar to Ralstonia solanacearum maltooligosyl trehalose trehalohydrolase rsp0237 or rs05186 SWALL:Q8XT78 (EMBL:AL646077) (622 aa) fasta scores: E(): 7.3e-43, 36.26% id in 626 aa, and to Rhizobium sp. malto-oligosyltrehalose trehalohydrolase TreZ SWALL:TREZ_RHISP (SWALL:Q53238) (596 aa) fasta scores: E(): 1.6e-08, 30.13% id in 365 aa; trehalose trehalohydrolase 2457752 3096087 BPSS1797 Burkholderia pseudomallei K96243 trehalose trehalohydrolase YP_111801.1 2456109 R 272560 CDS YP_111802.1 53722817 3095967 2458028..2458741 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein atu5140 or agr_pat_202 SWALL:Q8UKG9 (EMBL:AE008938) (238 aa) fasta scores: E(): 9.5e-47, 60.6% id in 231 aa, and to Pseudomonas aeruginosa hypothetical protein pa2034 SWALL:Q9I281 (EMBL:AE004629) (224 aa) fasta scores: E(): 1.4e-16, 38.24% id in 217 aa; hypothetical protein 2458741 3095967 BPSS1798 Burkholderia pseudomallei K96243 hypothetical protein YP_111802.1 2458028 D 272560 CDS YP_111803.1 53722818 3095968 2459079..2459534 1 NC_006351.1 Similar to Salmonella typhimurium cytoplasmic protein stm4549 SWALL:Q8ZJX0 (EMBL:AE008914) (152 aa) fasta scores: E(): 6.4e-34, 60.52% id in 152 aa, and to Pseudomonas aeruginosa hypothetical protein pa1357 SWALL:Q9I3Y7 (EMBL:AE004565) (158 aa) fasta scores: E(): 6.6e-34, 61.84% id in 152 aa; hypothetical protein 2459534 3095968 BPSS1799 Burkholderia pseudomallei K96243 hypothetical protein YP_111803.1 2459079 D 272560 CDS YP_111804.1 53722819 3095089 complement(2459599..2460837) 1 NC_006351.1 Similar to Escherichia coli L-lactate dehydrogenase LldD or LctD or b3605 SWALL:LLDD_ECOLI (SWALL:P33232) (396 aa) fasta scores: E(): 3.4e-45, 40.43% id in 366 aa, and to Pseudomonas putida L(+)-mandelate dehydrogenase MdlB SWALL:MDLB_PSEPU (SWALL:P20932) (393 aa) fasta scores: E(): 4.5e-46, 39.56% id in 369 aa; dehydrogenase 2460837 3095089 BPSS1800 Burkholderia pseudomallei K96243 dehydrogenase YP_111804.1 2459599 R 272560 CDS YP_111805.1 53722820 3095615 2461063..2461500 1 NC_006351.1 Similar to Methanosarcina mazei transposase mm2165 or mm3236 SWALL:AAM31861 (EMBL:AE013456) (168 aa) fasta scores: E(): 0.0016, 29.56% id in 115 aa, and to Sulfolobus solfataricus first ORF in transposon ISC1078 sso1384 SWALL:Q97YE2 (EMBL:AE006753) (152 aa) fasta scores: E(): 0.0043, 26.05% id in 119 aa; transposon protein 2461500 3095615 BPSS1801 Burkholderia pseudomallei K96243 transposon protein YP_111805.1 2461063 D 272560 CDS YP_111806.1 53722821 3095616 complement(2461742..2462368) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein Mll3530 mll3530 SWALL:Q98G16 (EMBL:AP003002) (208 aa) fasta scores: E(): 1.2e-33, 52.82% id in 195 aa, and to Pseudomonas putida conserved hypothetical protein pp3405 SWALL:AAN69008 (EMBL:AE016786) (209 aa) fasta scores: E(): 3.6e-10, 30.1% id in 196 aa. Note: This CDS has an alternative start codon at residue 12; hypothetical protein 2462368 3095616 BPSS1802 Burkholderia pseudomallei K96243 hypothetical protein YP_111806.1 2461742 R 272560 CDS YP_111807.1 53722822 3095107 2462431..2463285 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2489 SWALL:Q9I0Z3 (EMBL:AE004676) (271 aa) fasta scores: E(): 2.3e-43, 44.01% id in 259 aa, and to Streptomyces coelicolor AraC-family regulatory protein sco2294 or scc30.02C SWALL:Q9L019 (EMBL:AL939112) (278 aa) fasta scores: E(): 1.6e-23, 32.95% id in 267 aa; AraC family transcriptional regulator 2463285 3095107 BPSS1803 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111807.1 2462431 D 272560 CDS YP_111808.1 53722823 3096938 2463970..2465058 1 NC_006351.1 hypothetical protein 2465058 3096938 BPSS1804 Burkholderia pseudomallei K96243 hypothetical protein YP_111808.1 2463970 D 272560 CDS YP_111809.1 53722824 3096939 complement(2465125..2465709) 1 NC_006351.1 Similar to Rhodobacter capsulatus hypothetical 19.0 kDa protein SWALL:O68026 (EMBL:AF010496) (190 aa) fasta scores: E(): 7.5e-10, 34.03% id in 191 aa, and to Escherichia coli hypothetical protein YfiK or b2578 SWALL:YFIK_ECOLI (SWALL:P38101) (195 aa) fasta scores: E(): 2.7e-07, 32.5% id in 160 aa; hypothetical protein 2465709 3096939 BPSS1805 Burkholderia pseudomallei K96243 hypothetical protein YP_111809.1 2465125 R 272560 CDS YP_111810.1 53722825 3096776 complement(2465765..2466187) 1 NC_006351.1 Similar to Pyrobaculum aerophilum hypothetical protein pae2796 SWALL:Q8ZUG4 (EMBL:AE009894) (110 aa) fasta scores: E(): 4.7e-12, 40.56% id in 106 aa, and to Clostridium acetobutylicum possible pectin degradation protein cac3376 SWALL:Q97DU5 (EMBL:AE007834) (114 aa) fasta scores: E(): 1.8e-06, 35.64% id in 101 aa; hypothetical protein 2466187 3096776 BPSS1806 Burkholderia pseudomallei K96243 hypothetical protein YP_111810.1 2465765 R 272560 CDS YP_111811.1 53722826 3095371 complement(2466225..2467268) 1 NC_006351.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 2467268 mhpE 3095371 mhpE Burkholderia pseudomallei K96243 4-hydroxy-2-ketovalerate aldolase YP_111811.1 2466225 R 272560 CDS YP_111812.1 53722827 3095332 complement(2467265..2468158) 1 NC_006351.1 catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 2468158 mhpF 3095332 mhpF Burkholderia pseudomallei K96243 acetaldehyde dehydrogenase YP_111812.1 2467265 R 272560 CDS YP_111813.1 53722828 3096141 complement(2468155..2468997) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable thioesterase pa2425 SWALL:Q9I156 (EMBL:AE004670) (254 aa) fasta scores: E(): 1.2e-31, 41.46% id in 246 aa, and to Bacillus brevis gramicidin S biosynthesis GrsT protein SWALL:GRST_BACBR (SWALL:P14686) (256 aa) fasta scores: E(): 4e-31, 37.29% id in 244 aa; thioesterase 2468997 3096141 BPSS1809 Burkholderia pseudomallei K96243 thioesterase YP_111813.1 2468155 R 272560 CDS YP_111814.1 53722829 3096300 complement(2468994..2469938) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 branched-chain amino acid aminotransferase IlvE or b3770 or c4692 or z5281 or ecs4704 SWALL:ILVE_ECOLI (SWALL:P00510) (308 aa) fasta scores: E(): 8.4e-55, 49.34% id in 304 aa, and to Vibrio cholerae branched-chain amino acid aminotransferase vc0029 SWALL:Q9KVV9 (EMBL:AE004094) (319 aa) fasta scores: E(): 2e-59, 52.11% id in 307 aa; branched-chain amino acid aminotransferase 2469938 ilvE 3096300 ilvE Burkholderia pseudomallei K96243 branched-chain amino acid aminotransferase YP_111814.1 2468994 R 272560 CDS YP_111815.1 53722830 3096142 complement(2469953..2470636) 1 NC_006351.1 Similar to Legionella pneumophila protein DlpA SWALL:DLPA_LEGPN (SWALL:Q48806) (615 aa) fasta scores: E(): 6.2e-12, 29.54% id in 220 aa, and to Ralstonia solanacearum transferase rsp1231 or rs03175 SWALL:Q8XQJ4 (EMBL:AL646083) (216 aa) fasta scores: E(): 5.3e-09, 27.35% id in 223 aa; transferase 2470636 3096142 BPSS1811 Burkholderia pseudomallei K96243 transferase YP_111815.1 2469953 R 272560 CDS YP_111816.1 53722831 3095856 complement(2470644..2471441) 1 NC_006351.1 Similar to Bacillus brevis gramicidin S biosynthesis GrsT protein SWALL:GRST_BACBR (SWALL:P14686) (256 aa) fasta scores: E(): 6.4e-33, 36.84% id in 247 aa, and to Streptomyces coelicolor thioesterase sco5894 or sc3f7.14 SWALL:O54157 (EMBL:AL939125) (280 aa) fasta scores: E(): 2.3e-27, 37.87% id in 264 aa; non-ribosomal peptide synthesis thioesterase 2471441 3095856 BPSS1812 Burkholderia pseudomallei K96243 non-ribosomal peptide synthesis thioesterase YP_111816.1 2470644 R 272560 CDS YP_111817.1 53722832 3095989 complement(2471445..2472350) 1 NC_006351.1 Similar to Pseudomonas syringae syringomycin biosynthesis enzyme 2 SyrB2 SWALL:Q9RBY6 (EMBL:U25130) (310 aa) fasta scores: E(): 2e-50, 43.33% id in 300 aa, and to Pseudomonas syringae CmaB SWALL:O50472 (EMBL:U14657) (262 aa) fasta scores: E(): 8.9e-35, 40.81% id in 245 aa; non-ribosomal peptide synthase related protein 2472350 3095989 BPSS1813 Burkholderia pseudomallei K96243 non-ribosomal peptide synthase related protein YP_111817.1 2471445 R 272560 CDS YP_111818.1 53722833 3095990 complement(2472447..2472707) 1 NC_006351.1 Similar to the C-terminal region of Streptomyces antibioticus SimH SWALL:Q9F5J4 (EMBL:AF321122) (997 aa) fasta scores: E(): 0.067, 31.7% id in 82 aa, and of Streptomyces tendae NikP1 protein SWALL:Q9F2E7 (EMBL:AJ250581) (677 aa) fasta scores: E(): 0.076, 30.12% id in 83 aa; hypothetical protein 2472707 3095990 BPSS1814 Burkholderia pseudomallei K96243 hypothetical protein YP_111818.1 2472447 R 272560 CDS YP_111819.1 53722834 3096984 complement(2472704..2474293) 1 NC_006351.1 Similar to Streptomyces avermitilis non-ribosomal peptide synthetase SWALL:Q93H39 (EMBL:AB070952) (625 aa) fasta scores: E(): 4.2e-44, 38.2% id in 513 aa, and to Streptomyces coelicolor peptide synthase sco5891 or st3f7.11 SWALL:O54154 (EMBL:AL939125) (532 aa) fasta scores: E(): 1.8e-38, 32.47% id in 502 aa; non-ribosomal peptide synthase 2474293 3096984 BPSS1815 Burkholderia pseudomallei K96243 non-ribosomal peptide synthase YP_111819.1 2472704 R 272560 CDS YP_111820.1 53722835 3096339 complement(2475528..2475821) 1 NC_006351.1 Similar to Pseudomonas aurantiaca transcriptional regulatory protein SWALL:AAN18029 (EMBL:AY135187) (107 aa) fasta scores: E(): 2.5e-21, 66.66% id in 96 aa, and to Streptomyces coelicolor transcriptional regulator sco4059 or 2scd60.25 SWALL:Q9AK58 (EMBL:AL939118) (111 aa) fasta scores: E(): 3.2e-06, 40% id in 95 aa; regulatory protein 2475821 3096339 BPSS1816 Burkholderia pseudomallei K96243 regulatory protein YP_111820.1 2475528 R 272560 CDS YP_111821.1 53722836 3096340 complement(2475877..2476338) 1 NC_006351.1 Similar to Pseudomonas aurantiaca hypothetical protein SWALL:Q84H33 (EMBL:AY135187) (151 aa) fasta scores: E(): 6.7e-37, 62.66% id in 150 aa, and to Rhizobium meliloti hypothetical protein SMB21007 smb21007 SWALL:Q92UJ5 (EMBL:AL603646) (139 aa) fasta scores: E(): 0.00036, 28.76% id in 146 aa; hypothetical protein 2476338 3096340 BPSS1817 Burkholderia pseudomallei K96243 hypothetical protein YP_111821.1 2475877 R 272560 CDS YP_111822.1 53722837 3095508 complement(2476485..2477138) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsp0410 or rs00867 SWALL:Q8XSQ7 (EMBL:AL646078) (224 aa) fasta scores: E(): 5e-45, 52.17% id in 207 aa, and to Deinococcus radiodurans hypothetical protein dr0351 SWALL:Q9RXG2 (EMBL:AE001895) (227 aa) fasta scores: E(): 6.6e-16, 31.05% id in 219 aa; hypothetical protein 2477138 3095508 BPSS1818 Burkholderia pseudomallei K96243 hypothetical protein YP_111822.1 2476485 R 272560 CDS YP_111823.1 53722838 3095688 2477260..2477994 1 NC_006351.1 Similar to Escherichia coli serine/threonine protein phosphatase 1 PphA or PrpA or b1838 SWALL:PRP1_ECOLI (SWALL:P55798) (218 aa) fasta scores: E(): 3e-17, 35.74% id in 221 aa, and to Salmonella typhimurium serine/threonine protein phosphatase PrpA or stm1853 SWALL:Q8ZNY9 (EMBL:AE008782) (216 aa) fasta scores: E(): 2.9e-13, 32.12% id in 221 aa; serine/threonine protein phosphatase 2477994 3095688 BPSS1819 Burkholderia pseudomallei K96243 serine/threonine protein phosphatase YP_111823.1 2477260 D 272560 CDS YP_111824.1 53722839 3095689 complement(2478095..2478796) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll2215 SWALL:Q98IW7 (EMBL:AP002999) (240 aa) fasta scores: E(): 5.3e-23, 37.38% id in 214 aa, and to Brucella melitensis hypothetical protein bmeii0978 SWALL:Q8YBC2 (EMBL:AE009731) (221 aa) fasta scores: E(): 1.7e-16, 34.34% id in 198 aa; hypothetical protein 2478796 3095689 BPSS1820 Burkholderia pseudomallei K96243 hypothetical protein YP_111824.1 2478095 R 272560 CDS YP_111825.1 53722840 3096052 complement(2478793..2479212) 1 NC_006351.1 Similar to Rhizobium sp. hypothetical 14.7 kDa protein y4oB SWALL:Y4OB_RHISN (SWALL:P55587) (129 aa) fasta scores: E(): 5.9e-21, 59.13% id in 115 aa, and to Brucella melitensis hypothetical protein bmeii0977 SWALL:Q8YBC3 (EMBL:AE009731) (158 aa) fasta scores: E(): 1.2e-15, 43.84% id in 130 aa; hypothetical protein 2479212 3096052 BPSS1821 Burkholderia pseudomallei K96243 hypothetical protein YP_111825.1 2478793 R 272560 CDS YP_111826.1 53722841 3096064 complement(2479942..2480850) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0830 SWALL:Q9I5A9 (EMBL:AE004517) (277 aa) fasta scores: E(): 7.1e-34, 38.57% id in 267 aa, and to Caulobacter crescentus FF domain protein cc1344 SWALL:Q9A8K9 (EMBL:AE005810) (285 aa) fasta scores: E(): 1.7e-29, 35.31% id in 286 aa; hypothetical protein 2480850 3096064 BPSS1822 Burkholderia pseudomallei K96243 hypothetical protein YP_111826.1 2479942 R 272560 CDS YP_111827.1 53722842 3094935 2481354..2481695 1 NC_006351.1 Similar to Neisseria meningitidis peptidyl-prolyl cis-trans isomerase Fbp or nmb0027 SWALL:FKBP_NEIMB (SWALL:P25138) (109 aa) fasta scores: E(): 2.6e-24, 66.66% id in 105 aa, and to Neurospora crassa FK506-binding protein 9g6.180 SWALL:FKBP_NEUCR (SWALL:P20080) (120 aa) fasta scores: E(): 1.3e-19, 53.5% id in 114 aa; peptidyl-prolyl cis-trans isomerase 2481695 fbp 3094935 fbp Burkholderia pseudomallei K96243 peptidyl-prolyl cis-trans isomerase YP_111827.1 2481354 D 272560 CDS YP_111828.1 53722843 3096065 2481758..2482525 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3220 SWALL:Q9HZ20 (EMBL:AE004745) (254 aa) fasta scores: E(): 3.8e-21, 37.4% id in 254 aa, and to Photobacterium leiognathi probable transcriptional regulator LumQ SWALL:LUMQ_PHOLE (SWALL:Q51872) (248 aa) fasta scores: E(): 9.7e-13, 24.59% id in 248 aa; AraC family transcriptional regulator 2482525 3096065 BPSS1824 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111828.1 2481758 D 272560 CDS YP_111829.1 53722844 3095604 complement(2482814..2483980) 1 NC_006351.1 Similar to Anabaena sp. HepB or alr3698 SWALL:P70778 (EMBL:U68035) (389 aa) fasta scores: E(): 1.7e-42, 38.03% id in 376 aa, and to Mycobacterium tuberculosis hypothetical protein rv0486 or mt0504 or mtcy20g9.12 SWALL:Y486_MYCTU (SWALL:Q11152) (480 aa) fasta scores: E(): 1.4e-11, 33.89% id in 354 aa; glycosyltransferase 2483980 3095604 BPSS1825 Burkholderia pseudomallei K96243 glycosyltransferase YP_111829.1 2482814 R 272560 CDS YP_111830.1 53722845 3095682 complement(2483980..2485164) 1 NC_006351.1 Similar to Anabaena sp. glycosyltransferase alr2839 SWALL:Q8YT87 (EMBL:AP003591) (381 aa) fasta scores: E(): 3.1e-62, 47.25% id in 383 aa, and to Methanobacterium thermoautotrophicum LPS biosynthesis related protein mth450 SWALL:O26550 (EMBL:AE000829) (411 aa) fasta scores: E(): 2.7e-13, 27.87% id in 330 aa; glycosyltransferase 2485164 3095682 BPSS1826 Burkholderia pseudomallei K96243 glycosyltransferase YP_111830.1 2483980 R 272560 CDS YP_111831.1 53722846 3095683 complement(2485161..2486636) 1 NC_006351.1 Similar to Anabaena sp. hypothetical protein alr2841 SWALL:Q8YT85 (EMBL:AP003591) (474 aa) fasta scores: E(): 1.5e-53, 32.74% id in 455 aa; hypothetical protein 2486636 3095683 BPSS1827 Burkholderia pseudomallei K96243 hypothetical protein YP_111831.1 2485161 R 272560 CDS YP_111832.1 53722847 3095923 complement(2486648..2487787) 1 NC_006351.1 glycosyltransferase group 1 protein 2487787 3095923 BPSS1828 Burkholderia pseudomallei K96243 glycosyltransferase group 1 protein YP_111832.1 2486648 R 272560 CDS YP_111833.1 53722848 3095924 complement(2487831..2488778) 1 NC_006351.1 Similar to Anabaena sp. glycosyltransferase alr2840 SWALL:Q8YT86 (EMBL:AP003591) (315 aa) fasta scores: E(): 3.2e-53, 48.84% id in 303 aa, and to Archaeoglobus fulgidus succinoglycan biosynthesis protein af0620 SWALL:O29635 (EMBL:AE001062) (297 aa) fasta scores: E(): 1.9e-08, 30.73% id in 231 aa; glycosyltransferase 2488778 3095924 BPSS1829 Burkholderia pseudomallei K96243 glycosyltransferase YP_111833.1 2487831 R 272560 CDS YP_111834.1 53722849 3095477 complement(2488808..2491027) 1 NC_006351.1 Similar to Acinetobacter johnsonii tyrosine-protein kinase Ptk SWALL:PTK_ACIJO (SWALL:O52788) (733 aa) fasta scores: E(): 9.7e-68, 33.1% id in 728 aa, and to Escherichia coli tyrosine-protein kinase Wzc or b2060 SWALL:WZC_ECOLI (SWALL:P76387) (720 aa) fasta scores: E(): 4e-63, 36.25% id in 742 aa; exopolysaccharide biosynthesis-like tyrosine-protein kinase 2491027 3095477 BPSS1830 Burkholderia pseudomallei K96243 exopolysaccharide biosynthesis-like tyrosine-protein kinase YP_111834.1 2488808 R 272560 CDS YP_111835.1 53722850 3095991 complement(2491078..2492253) 1 NC_006351.1 Similar to Erwinia amylovora amylovoran export outer membrane protein AmsH precursor SWALL:AMSH_ERWAM (SWALL:Q46629) (377 aa) fasta scores: E(): 1.3e-34, 38.36% id in 391 aa, and to Escherichia coli, and Escherichia coli O157:H7 polysaccharide export protein Wza precursor b2062 or z3227 or ecs2867 SWALL:WZA_ECOLI (SWALL:P76388) (379 aa) fasta scores: E(): 7.2e-34, 36.45% id in 395 aa, and to Vibrio vulnificus capsular polysaccharide transport protein Wza SWALL:Q938A5 (EMBL:AY055488) (378 aa) fasta scores: E(): 3.3e-35, 38.94% id in 380 aa; exopolysaccharide (EPS) biosynthesis related polysaccharide lipoprotein 2492253 3095991 BPSS1831 Burkholderia pseudomallei K96243 exopolysaccharide (EPS) biosynthesis related polysaccharide lipoprotein YP_111835.1 2491078 R 272560 CDS YP_111836.1 53722851 3095992 complement(2492247..2492681) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O157:H7 low molecular weight protein-tyrosine-phosphatase Wzb or b2061 or z3226 or ecs2866 SWALL:WZB_ECOLI (SWALL:P77153) (147 aa) fasta scores: E(): 5.1e-16, 40.27% id in 144 aa, and to Acinetobacter johnsonii low molecular weight protein-tyrosine-phosphatase Ptp SWALL:PTP_ACIJO (SWALL:O52787) (142 aa) fasta scores: E(): 1.7e-16, 39.86% id in 143 aa. Note: Also similar to BPSL2779 (145 aa) fasta scores: E(): 5.1e-15, 41.259% identity in 143 aa overlap; exopolysaccharide (EPS) biosynthesis-likelow molecular weight protein-tyrosine-phosphatase 2492681 3095992 BPSS1832 Burkholderia pseudomallei K96243 exopolysaccharide (EPS) biosynthesis-likelow molecular weight protein-tyrosine-phosphatase YP_111836.1 2492247 R 272560 CDS YP_111837.1 53722852 3096805 complement(2492704..2494125) 1 NC_006351.1 Similar to Pseudomonas aeruginosa UDP-glucose 6-dehydrogenase Udg or Ugd or pa2022 SWALL:UDG_PSEAE (SWALL:O86422) (453 aa) fasta scores: E(): 5.7e-83, 51.97% id in 456 aa, and to Rhizobium meliloti UDP-glucose 6-dehydrogenase RkpK or r01082 or smc02641 SWALL:UDG_RHIME (SWALL:O54068) (437 aa) fasta scores: E(): 2.8e-70, 49.66% id in 453 aa. Note: Also similar to BPSL2511 Udg (467 aa) fasta scores: E(): 1.5e-121, 76.304% identity in 460 aa overlap; UDP-glucose 6-dehydrogenase 2 2494125 udg2 3096805 udg2 Burkholderia pseudomallei K96243 UDP-glucose 6-dehydrogenase 2 YP_111837.1 2492704 R 272560 CDS YP_111838.1 53722853 3096118 complement(2494171..2495586) 1 NC_006351.1 Similar to Escherichia coli colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ or b2047 SWALL:WCAJ_ECOLI (SWALL:P71241) (464 aa) fasta scores: E(): 2.5e-59, 39.65% id in 469 aa, and to Salmonella typhimurium undecaprenylphosphate glucosephosphotransferase WcaJ or stm2103 SWALL:Q9F799 (EMBL:AF285085) (464 aa) fasta scores: E(): 2.8e-58, 38.92% id in 465 aa. Note: Also similar to BPSL0618 (473 aa) fasta scores: E(): 3.5e-96, 50.433% identity in 462 aa overlap; lipopolysaccharide biosynthesis-like protein 2495586 3096118 BPSS1834 Burkholderia pseudomallei K96243 lipopolysaccharide biosynthesis-like protein YP_111838.1 2494171 R 272560 CDS YP_111839.1 53722854 3095239 2496042..2497502 1 NC_006351.1 Similar to Salmonella enterica subsp. enterica GDP-mannose pyrophosphorylase ManC SWALL:Q9EXX7 (EMBL:AY012192) (482 aa) fasta scores: E(): 4.4e-76, 48.45% id in 485 aa, and to Escherichia coli O157:H7 mannose-1-phosphate guanylyltransferase ManC or z3195 or ecs2836 SWALL:MANC_ECO57 (SWALL:O85342) (482 aa) fasta scores: E(): 1.2e-75, 48.14% id in 486 aa. Note: Also similar to BPSL0605 ManC (531 aa) fasta scores: E(): 1.2e-105, 63.843% identity in 484 aa overlap; LPS biosynthesis mannose-1-phosphate guanylyltransferase 2497502 3095239 BPSS1835 Burkholderia pseudomallei K96243 LPS biosynthesis mannose-1-phosphate guanylyltransferase YP_111839.1 2496042 D 272560 CDS YP_111840.1 53722855 3095240 complement(2497575..2498579) 1 NC_006351.1 Similar in its N-terminal region to Shigella flexneri IS1650 ORFA s0204 SWALL:Q9AFP3 (EMBL:AF348706) (149 aa) fasta scores: E(): 5.5e-06, 37.77% id in 90 aa, and to Agrobacterium tumefaciens ORF3 protein SWALL:Q00429 (EMBL:X53945) (123 aa) fasta scores: E(): 1.1e-05, 35.6% id in 132 aa; hypothetical protein 2498579 3095240 BPSS1836 Burkholderia pseudomallei K96243 hypothetical protein YP_111840.1 2497575 R 272560 CDS YP_111841.1 53722856 3096881 complement(2499156..2499737) 1 NC_006351.1 Similar to Sulfolobus tokodaii hypothetical protein st2368 SWALL:Q96XZ9 (EMBL:AP000989) (188 aa) fasta scores: E(): 2.4e-09, 32.11% id in 137 aa, and to Sulfolobus solfataricus hypothetical protein sso2644 SWALL:Q97VH9 (EMBL:AE006859) (188 aa) fasta scores: E(): 3.9e-07, 32.84% id in 137 aa; hypothetical protein 2499737 3096881 BPSS1837 Burkholderia pseudomallei K96243 hypothetical protein YP_111841.1 2499156 R 272560 CDS YP_111842.1 53722857 3096882 complement(2499763..2501100) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O157:H7 anaerobic glycerol-3-phosphate dehydrogenase subunit C GlpC or b2243 or z3501 or ecs3128 SWALL:GLPC_ECOLI (SWALL:P13034) (396 aa) fasta scores: E(): 3e-22, 28.08% id in 413 aa, and to Salmonella typhimurium SN-glycerol-3-phosphate dehydrogenase stm2286 SWALL:Q8ZNG3 (EMBL:AE008802) (396 aa) fasta scores: E(): 1.3e-22, 28.7% id in 418 aa; ferredoxin 2501100 3096882 BPSS1838 Burkholderia pseudomallei K96243 ferredoxin YP_111842.1 2499763 R 272560 CDS YP_111843.1 53722858 3096815 complement(2501208..2501630) 1 NC_006351.1 Similar to the N-terminal region of Porphyromonas gingivalis rubrerythrin Rr or Rbr SWALL:RUBY_PORGI (SWALL:Q9AGG3) (200 aa) fasta scores: E(): 2.8e-17, 46.09% id in 141 aa, and of Desulfovibrio vulgaris rubrerythrin Rr SWALL:RUBY_DESVH (SWALL:P24931) (191 aa) fasta scores: E(): 5.8e-16, 45.58% id in 136 aa. Note: The C-terminal region of the database matches belongs to the rubredoxin family; this CDS presents no similarities to this region; oxidative stress related rubrerythrin protein 2501630 3096815 BPSS1839 Burkholderia pseudomallei K96243 oxidative stress related rubrerythrin protein YP_111843.1 2501208 R 272560 CDS YP_111844.1 53722859 3096352 complement(2501901..2502935) 1 NC_006351.1 Similar to Ralstonia solanacearum N-acetylmuramoyl-L-alanine amidase rsc1796 or rs04196 SWALL:Q8XYG2 (EMBL:AL646066) (343 aa) fasta scores: E(): 3.2e-86, 68.86% id in 334 aa, and to Escherichia coli probable N-acetylmuramoyl-L-alanine amidase YbjR or b0867 SWALL:YBJR_ECOLI (SWALL:P75820) (276 aa) fasta scores: E(): 5e-34, 41.72% id in 290 aa; N-acetylmuramoyl-L-alanine amidase 2502935 3096352 BPSS1840 Burkholderia pseudomallei K96243 N-acetylmuramoyl-L-alanine amidase YP_111844.1 2501901 R 272560 CDS YP_111845.1 53722860 3096353 complement(2503507..2504775) 1 NC_006351.1 Similar to Streptomyces coelicolor RNA polymerase sigma factor sco4757 or sc6g4.35 SWALL:O86798 (EMBL:AL939121) (419 aa) fasta scores: E(): 1.7e-96, 65.4% id in 422 aa, and to Rhizobium loti sigma-70 factor, ECF subfamily mll7837 SWALL:Q984U6 (EMBL:AP003012) (417 aa) fasta scores: E(): 7.9e-52, 47.5% id in 421 aa; RNA polymerase sigma factor 2504775 3096353 BPSS1841 Burkholderia pseudomallei K96243 RNA polymerase sigma factor YP_111845.1 2503507 R 272560 CDS YP_111846.1 53722861 3095450 complement(2504772..2505311) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll4384 SWALL:Q98E68 (EMBL:AP003004) (175 aa) fasta scores: E(): 2.5e-14, 37.41% id in 155 aa; hypothetical protein 2505311 3095450 BPSS1842 Burkholderia pseudomallei K96243 hypothetical protein YP_111846.1 2504772 R 272560 CDS YP_111847.1 53722862 3095289 complement(2505333..2505746) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1354 SWALL:Q9I3Z0 (EMBL:AE004565) (141 aa) fasta scores: E(): 2.6e-25, 56.93% id in 137 aa, and to Ralstonia solanacearum hypothetical protein rsp0637 or rs03730 SWALL:Q8XS44 (EMBL:AL646079) (143 aa) fasta scores: E(): 3.5e-21, 50% id in 140 aa; hypothetical protein 2505746 3095289 BPSS1843 Burkholderia pseudomallei K96243 hypothetical protein YP_111847.1 2505333 R 272560 CDS YP_111848.1 53722863 3095290 complement(2505912..2506265) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr2587 SWALL:Q98I36 (EMBL:AP003000) (134 aa) fasta scores: E(): 3e-08, 34.51% id in 113 aa, and to Pseudomonas putida conserved hypothetical protein pp4555 SWALL:AAN70128 (EMBL:AE016791) (114 aa) fasta scores: E(): 1.4e-07, 37.5% id in 112 aa; hypothetical protein 2506265 3095290 BPSS1844 Burkholderia pseudomallei K96243 hypothetical protein YP_111848.1 2505912 R 272560 CDS YP_111849.1 53722864 3095094 2506642..2508516 1 NC_006351.1 Similar to Xanthomonas axonopodis nuclease xac0274 SWALL:AAM35166 (EMBL:AE011652) (609 aa) fasta scores: E(): 1.3e-59, 39.51% id in 615 aa, and to Anabaena sp. hypothetical protein alr0276 SWALL:Q8Z027 (EMBL:AP003581) (2348 aa) fasta scores: E(): 4.1e-38, 43.57% id in 615 aa; endonuclease/exonuclease/phosphatase 2508516 3095094 BPSS1845 Burkholderia pseudomallei K96243 endonuclease/exonuclease/phosphatase YP_111849.1 2506642 D 272560 CDS YP_111850.1 53722865 3095095 2509305..2509685 1 NC_006351.1 Low similarity to Yersinia pestis membrane protein ypo0570 or y3609 SWALL:Q8ZID5 (EMBL:AJ414143) (101 aa) fasta scores: E(): 0.0024, 30.43% id in 92 aa, and to Pseudomonas aeruginosa hypothetical protein pa2754 SWALL:Q9I089 (EMBL:AE004703) (109 aa) fasta scores: E(): 0.021, 28.7% id in 108 aa; hypothetical protein 2509685 3095095 BPSS1846 Burkholderia pseudomallei K96243 hypothetical protein YP_111850.1 2509305 D 272560 CDS YP_111851.1 53722866 3095255 2509734..2510318 1 NC_006351.1 Similar to Ralstonia solanacearum lipoprotein rsc1878 or rs03438 SWALL:Q8XY85 (EMBL:AL646067) (200 aa) fasta scores: E(): 2.6e-34, 56.47% id in 193 aa, and to Xylella fastidiosa hypothetical protein xf0565 SWALL:Q9PFU2 (EMBL:AE003903) (301 aa) fasta scores: E(): 1.5e-06, 30.38% id in 181 aa; lipoprotein 2510318 3095255 BPSS1847 Burkholderia pseudomallei K96243 lipoprotein YP_111851.1 2509734 D 272560 CDS YP_111852.1 53722867 3094990 2510510..2511604 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2651 SWALL:Q9I0I7 (EMBL:AE004694) (352 aa) fasta scores: E(): 3e-85, 64.7% id in 340 aa, and to Brucella suis membrane protein, bra0460 SWALL:AAN33654 (EMBL:AE014544) (352 aa) fasta scores: E(): 4.3e-65, 48.82% id in 340 aa. Note: This CDS contains a possible alternative start codon at residue 13; hypothetical protein 2511604 3094990 BPSS1848 Burkholderia pseudomallei K96243 hypothetical protein YP_111852.1 2510510 D 272560 CDS YP_111853.1 53722868 3094991 complement(2511820..2512296) 1 NC_006351.1 hypothetical protein 2512296 3094991 BPSS1849 Burkholderia pseudomallei K96243 hypothetical protein YP_111853.1 2511820 R 272560 CDS YP_111854.1 53722869 3095485 complement(2512421..2514517) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0781 pa0781 SWALL:Q9I5F7 (EMBL:AE004513) (687 aa) fasta scores: E(): 4.9e-139, 56.81% id in 690 aa, and to Xanthomonas axonopodis outer membrane hemin receptor xac2829 SWALL:Q8PIR6 (EMBL:AE011924) (687 aa) fasta scores: E(): 2.9e-21, 33.37% id in 731 aa; hypothetical protein 2514517 3095485 BPSS1850 Burkholderia pseudomallei K96243 hypothetical protein YP_111854.1 2512421 R 272560 CDS YP_111855.1 53722870 3096896 2514984..2516189 1 NC_006351.1 Similar to Rhizobium meliloti transmembrane transport protein ra1285 or sma2377 SWALL:Q92XG9 (EMBL:AE007314) (389 aa) fasta scores: E(): 2.8e-27, 32.34% id in 371 aa, and to Pseudomonas aeruginosa probable MFS transporter pa4136 SWALL:Q9HWP5 (EMBL:AE004830) (402 aa) fasta scores: E(): 1.3e-23, 31.65% id in 398 aa; transport-related membrane protein 2516189 3096896 BPSS1851 Burkholderia pseudomallei K96243 transport-related membrane protein YP_111855.1 2514984 D 272560 CDS YP_111856.1 53722871 3096897 complement(2516831..2517847) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable oxidoreductase pa1648 SWALL:Q9I377 (EMBL:AE004592) (334 aa) fasta scores: E(): 4.9e-54, 46.6% id in 339 aa, and to Rhizobium loti quinone oxidoreductase mlr6843 SWALL:Q987Z3 (EMBL:AP003010) (339 aa) fasta scores: E(): 5.7e-44, 43.1% id in 341 aa; oxidoreductase 2517847 3096897 BPSS1852 Burkholderia pseudomallei K96243 oxidoreductase YP_111856.1 2516831 R 272560 CDS YP_111857.1 53722872 3094931 complement(2518209..2519006) 1 NC_006351.1 Converts 2,5-dichloro-2,5-cyclohexadiene-1,4-diol to 2,5-dichlorohydroquinone; short chain dehydrogenase 2519006 3094931 BPSS1853 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_111857.1 2518209 R 272560 CDS YP_111858.1 53722873 3094932 complement(2519246..2520016) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1828 SWALL:Q9I2R7 (EMBL:AE004609) (255 aa) fasta scores: E(): 3.1e-62, 66.66% id in 255 aa, and to Caulobacter crescentus oxidoreductase, short-chain dehydrogenase/reductase cc3076 SWALL:Q9A3X5 (EMBL:AE005971) (254 aa) fasta scores: E(): 3.1e-29, 39.2% id in 250 aa; short chain dehydrogenase 2520016 3094932 BPSS1854 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_111858.1 2519246 R 272560 CDS YP_111859.1 53722874 3097075 complement(2520050..2520739) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1831 SWALL:Q9I2R4 (EMBL:AE004609) (236 aa) fasta scores: E(): 1.9e-19, 33.89% id in 236 aa; phosphoglycerate mutase 2520739 3097075 BPSS1855 Burkholderia pseudomallei K96243 phosphoglycerate mutase YP_111859.1 2520050 R 272560 CDS YP_111860.1 53722875 3096467 complement(2520736..2521812) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1829 SWALL:Q9I2R6 (EMBL:AE004609) (356 aa) fasta scores: E(): 2.3e-67, 51.36% id in 331 aa, and to Streptomyces coelicolor phosphotransferase sco1689 or sci30a.10 SWALL:Q9S263 (EMBL:AL939109) (341 aa) fasta scores: E(): 1.4e-31, 38.11% id in 328 aa; phosphotransferase 2521812 3096467 BPSS1856 Burkholderia pseudomallei K96243 phosphotransferase YP_111860.1 2520736 R 272560 CDS YP_111861.1 53722876 3096468 complement(2521809..2523041) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa2550 SWALL:Q9I0T4 (EMBL:AE004683) (409 aa) fasta scores: E(): 6e-103, 63.52% id in 403 aa, and to Rattus norvegicus acyl-CoA dehydrogenase, medium-chain specific, mitochondrial precursor AcaDM SWALL:ACDM_RAT (SWALL:P08503) (421 aa) fasta scores: E(): 9.5e-27, 28.75% id in 400 aa; acyl-CoA dehydrogenase 2523041 3096468 BPSS1857 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_111861.1 2521809 R 272560 CDS YP_111862.1 53722877 3095314 2523398..2524324 1 NC_006351.1 Similar to Burkholderia cepacia DntR SWALL:Q8VUD7 (EMBL:AF169302) (301 aa) fasta scores: E(): 9.3e-22, 30.4% id in 296 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2018 or rs03586 SWALL:Q8XXU5 (EMBL:AL646067) (321 aa) fasta scores: E(): 1.9e-38, 41.11% id in 304 aa; LysR family transcriptional regulator 2524324 3095314 BPSS1858 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111862.1 2523398 D 272560 CDS YP_111863.1 53722878 3095282 2524416..2524817 1 NC_006351.1 Similar to Xanthomonas campestris hypothetical protein xcc2716 SWALL:AAM41988 (EMBL:AE012384) (144 aa) fasta scores: E(): 6.4e-13, 42.01% id in 119 aa, and to Caulobacter crescentus hypothetical protein cc2998 SWALL:Q9A445 (EMBL:AE005963) (158 aa) fasta scores: E(): 2.3e-10, 38.39% id in 112 aa; hypothetical protein 2524817 3095282 BPSS1859 Burkholderia pseudomallei K96243 hypothetical protein YP_111863.1 2524416 D 272560 CDS YP_111864.1 53722879 3095283 complement(2524957..2526144) 1 NC_006351.1 hypothetical protein 2526144 3095283 BPSS1860 Burkholderia pseudomallei K96243 hypothetical protein YP_111864.1 2524957 R 272560 CDS YP_111865.1 53722880 3095870 complement(2527026..2527907) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2765 SWALL:Q9I078 (EMBL:AE004704) (299 aa) fasta scores: E(): 4.7e-77, 64.84% id in 293 aa, and to Escherichia coli hypothetical protein YfeX or b2431 SWALL:YFEX_ECOLI (SWALL:P76536) (299 aa) fasta scores: E(): 7.6e-18, 31.12% id in 257 aa; hypothetical protein 2527907 3095870 BPSS1861 Burkholderia pseudomallei K96243 hypothetical protein YP_111865.1 2527026 R 272560 CDS YP_111866.1 53722881 3095871 2528589..2530598 1 NC_006351.1 Similar to Rhizobium loti ATP-binding protein of ABC transporter mll0815 SWALL:Q98LY9 (EMBL:AP002995) (601 aa) fasta scores: E(): 1.6e-148, 71.28% id in 592 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase Exsa or atu4728 or agr_l_309 SWALL:Q8U6S8 (EMBL:AE009401) (600 aa) fasta scores: E(): 1.8e-141, 68.41% id in 592 aa; ABC transporter ATP-binding protein 2530598 3095871 BPSS1862 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_111866.1 2528589 D 272560 CDS YP_111867.1 53722882 3095108 complement(2530933..2531631) 1 NC_006351.1 Similar to Anabaena sp. thij family protein all7521 SWALL:Q8ZSI9 (EMBL:AP003602) (226 aa) fasta scores: E(): 2.7e-43, 53.36% id in 208 aa, and to Streptomyces coelicolor hypothetical protein sco6747 sco6747 or sc5f2a.30 SWALL:Q9X7Q3 (EMBL:AL939129) (211 aa) fasta scores: E(): 7e-30, 43.81% id in 210 aa; DJ-1/PfpI family protein 2531631 3095108 BPSS1863 Burkholderia pseudomallei K96243 DJ-1/PfpI family protein YP_111867.1 2530933 R 272560 CDS YP_111868.1 53722883 3096381 2531740..2532780 1 NC_006351.1 Similar to Streptomyces coelicolor transcriptional regulator sco6746 or sc5f2a.29 SWALL:Q9X7Q2 (EMBL:AL939129) (325 aa) fasta scores: E(): 2.3e-50, 50.94% id in 318 aa, and to Caulobacter crescentus transcriptional regulator, AraC family cc2960 SWALL:Q9A483 (EMBL:AE005960) (312 aa) fasta scores: E(): 5.1e-46, 47.92% id in 313 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; AraC family transcriptional regulator 2532780 3096381 BPSS1864 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111868.1 2531740 D 272560 CDS YP_111869.1 53722884 3097179 2533352..2534392 1 NC_006351.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2534392 trpS 3097179 trpS Burkholderia pseudomallei K96243 tryptophanyl-tRNA synthetase YP_111869.1 2533352 D 272560 CDS YP_111870.1 53722885 3096382 2534904..2535572 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc1027 or rs04225 SWALL:Q8Y0L6 (EMBL:AL646062) (250 aa) fasta scores: E(): 8e-10, 32.11% id in 218 aa; lipoprotein 2535572 3096382 BPSS1866 Burkholderia pseudomallei K96243 lipoprotein YP_111870.1 2534904 D 272560 CDS YP_111871.1 53722886 3096830 complement(2535679..2536092) 1 NC_006351.1 Possible gene remnant. Similar to the c-terminal regions of Rhizobium meliloti transcription factor SMA1454 SWALL:Q92YS0 (EMBL:AE007266) (356 aa) fasta scores: E(): 1.5, 30.4% id in 125 aa, and Pseudomonas putida transcriptional regulator, AraC family SWALL:Q88EF7 (EMBL:AE016790) (353 aa) fasta scores: E(): 0.49, 34.23% id in 111 aa; hypothetical protein 2536092 3096830 BPSS1866A Burkholderia pseudomallei K96243 hypothetical protein YP_111871.1 2535679 R 272560 CDS YP_111872.1 53722887 3095023 2536426..2537370 1 NC_006351.1 Similar to Clostridium acetobutylicum conserved membrane protein, possible homolog of CAAX-like membrane endopeptidase cac0420 SWALL:Q97LY0 (EMBL:AE007556) (276 aa) fasta scores: E(): 5.8e-12, 27.13% id in 269 aa, and to Caulobacter crescentus membrane protein, cc2538 SWALL:Q9A5B2 (EMBL:AE005921) (309 aa) fasta scores: E(): 2.4e-11, 27.63% id in 304 aa; hypothetical protein 2537370 3095023 BPSS1867 Burkholderia pseudomallei K96243 hypothetical protein YP_111872.1 2536426 D 272560 CDS YP_111873.1 53722888 3095024 complement(2537573..2538856) 1 NC_006351.1 Similar to Xanthomonas campestris hypothetical protein xcc1977 SWALL:Q8P988 (EMBL:AE012302) (440 aa) fasta scores: E(): 6.5e-89, 61.11% id in 414 aa, and to Clostridium perfringens hypothetical protein cpe0590 SWALL:Q8XMU8 (EMBL:AP003187) (437 aa) fasta scores: E(): 4.1e-60, 44.98% id in 389 aa; voltage gated chloride channel membrane protein 2538856 3095024 BPSS1868 Burkholderia pseudomallei K96243 voltage gated chloride channel membrane protein YP_111873.1 2537573 R 272560 CDS YP_111874.1 53722889 3095300 complement(2539182..2539904) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable haloacid dehalogenase pa0810 SWALL:Q9I5C9 (EMBL:AE004516) (233 aa) fasta scores: E(): 1.6e-37, 48.08% id in 235 aa, and to Pseudomonas sp. 2-haloalkanoic acid dehalogenase I SWALL:HAD1_PSESP (SWALL:P24069) (227 aa) fasta scores: E(): 1e-08, 31.88% id in 207 aa; dehalogenase 2539904 3095300 BPSS1869 Burkholderia pseudomallei K96243 dehalogenase YP_111874.1 2539182 R 272560 CDS YP_111875.1 53722890 3095301 complement(2540279..2541307) 1 NC_006351.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 2541307 3095301 BPSS1870 Burkholderia pseudomallei K96243 chemotaxis-specific methylesterase YP_111875.1 2540279 R 272560 CDS YP_111876.1 53722891 3094951 complement(2541314..2543908) 1 NC_006351.1 Similar to Thermotoga maritima chemotaxis protein CheA or tm0702 SWALL:CHEA_THEMA (SWALL:Q56310) (671 aa) fasta scores: E(): 2.2e-33, 27.4% id in 708 aa, and to Rhizobium loti chemotaxis histidine kinase mll9511 SWALL:Q98PD0 (EMBL:AP003017) (757 aa) fasta scores: E(): 1.1e-104, 49.07% id in 864 aa; chemotaxis-related histidine kinase 2543908 3094951 BPSS1871 Burkholderia pseudomallei K96243 chemotaxis-related histidine kinase YP_111876.1 2541314 R 272560 CDS YP_111877.1 53722892 3096913 complement(2543905..2544639) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll9513 SWALL:Q98PC9 (EMBL:AP003017) (234 aa) fasta scores: E(): 1.2e-21, 38.33% id in 240 aa, and the C-terminal region of Rhizobium meliloti chemotaxis protein CheW or r00640 or smc03008 SWALL:CHEW_RHIME (SWALL:Q52881) (155 aa) fasta scores: E(): 1.7e-05, 31.25% id in 144 aa; chemotaxis-related protein 2544639 3096913 BPSS1872 Burkholderia pseudomallei K96243 chemotaxis-related protein YP_111877.1 2543905 R 272560 CDS YP_111878.1 53722893 3096914 complement(2544620..2546674) 1 NC_006351.1 Similar to Ralstonia solanacearum methyltransferase rsp1647 or rs02206 SWALL:Q8XPJ3 (EMBL:AL646086) (466 aa) fasta scores: E(): 1.3e-45, 37.71% id in 684 aa, and to Myxococcus xanthus protein methyltransferase FrzF SWALL:FRZF_MYXXA (SWALL:P31759) (593 aa) fasta scores: E(): 7.1e-08, 27.28% id in 546 aa; chemotaxis-related methyltranferase 2546674 3096914 BPSS1873 Burkholderia pseudomallei K96243 chemotaxis-related methyltranferase YP_111878.1 2544620 R 272560 CDS YP_111879.1 53722894 3097197 complement(2546671..2547213) 1 NC_006351.1 Similar to Pseudomonas putida purine-binding chemotaxis protein CheW3 SWALL:Q93A55 (EMBL:AF430345) (168 aa) fasta scores: E(): 1.2e-08, 39.61% id in 154 aa, and to Pseudomonas aeruginosa CheW or pa1464 SWALL:O87130 (EMBL:AB012767) (159 aa) fasta scores: E(): 0.00051, 35.44% id in 79 aa; chemotaxis-related protein 2547213 3097197 BPSS1874 Burkholderia pseudomallei K96243 chemotaxis-related protein YP_111879.1 2546671 R 272560 CDS YP_111880.1 53722895 3097202 complement(2547224..2548900) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable chemotaxis transducer pa3708 SWALL:Q9HXT3 (EMBL:AE004789) (542 aa) fasta scores: E(): 1.4e-91, 57.51% id in 539 aa, and to Pseudomonas aeruginosa protein PilJ or pa0411 SWALL:PILJ_PSEAE (SWALL:P42257) (682 aa) fasta scores: E(): 4.5e-21, 27.94% id in 526 aa; chemotaxis-related protein 2548900 3097202 BPSS1875 Burkholderia pseudomallei K96243 chemotaxis-related protein YP_111880.1 2547224 R 272560 CDS YP_111881.1 53722896 3097203 complement(2549071..2550168) 1 NC_006351.1 N-terminal region similar to Pseudomonas aeruginosa probable two-component response regulator pa3702 SWALL:Q9HXT9 (EMBL:AE004789) (347 aa) fasta scores: E(): 3.7e-29, 64.92% id in 134 aa, C-terminal region to Caulobacter crescentus sensory box histidine kinase, cc3327 SWALL:Q9A377 (EMBL:AE005994) (761 aa) fasta scores: E(): 9.5e-22, 37.61% id in 226 aa, and in full length to Mycobacterium leprae sensor-like histidine kinase SenX3 or ml2440 or b2168_c3_247 SWALL:SEX3_MYCLE (SWALL:P54883) (443 aa) fasta scores: E(): 1.9e-15, 29.85% id in 335 aa; sensor kinase/response regulator fusion protein 2550168 3097203 BPSS1876 Burkholderia pseudomallei K96243 sensor kinase/response regulator fusion protein YP_111881.1 2549071 R 272560 CDS YP_111882.1 53722897 3097144 2550617..2550940 1 NC_006351.1 hypothetical protein 2550940 3097144 BPSS1876A Burkholderia pseudomallei K96243 hypothetical protein YP_111882.1 2550617 D 272560 CDS YP_111883.1 53722898 3097145 2550984..2551319 1 NC_006351.1 hypothetical protein 2551319 3097145 BPSS1877 Burkholderia pseudomallei K96243 hypothetical protein YP_111883.1 2550984 D 272560 CDS YP_111884.1 53722899 3094893 complement(2551599..2553032) 1 NC_006351.1 Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 5.2e-45, 36.61% id in 478 aa, and to Rhizobium sp. probable succinate-semialdehyde dehydrogenase [NADP+] GabD or y4sJ SWALL:GABD_RHISN (SWALL:P55653) (491 aa) fasta scores: E(): 1.6e-42, 34.51% id in 481 aa; dehydrogenase 2553032 3094893 BPSS1878 Burkholderia pseudomallei K96243 dehydrogenase YP_111884.1 2551599 R 272560 CDS YP_111885.1 53722900 3097059 complement(2553124..2554764) 1 NC_006351.1 catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase 2554764 3097059 BPSS1879 Burkholderia pseudomallei K96243 acetolactate synthase YP_111885.1 2553124 R 272560 CDS YP_111886.1 53722901 3097060 complement(2555071..2556651) 1 NC_006351.1 Similar to Agrobacterium tumefaciens Na+/H+ antiporter atu3059 or agr_l_3497 SWALL:Q8UBF7 (EMBL:AE009236) (550 aa) fasta scores: E(): 7e-101, 53.2% id in 530 aa, and to Rhizobium loti Na+/H+ antiporter mll3064 SWALL:Q98H22 (EMBL:AP003001) (517 aa) fasta scores: E(): 8.4e-49, 36.46% id in 521 aa; Na+/H+ antiporter membrane protein 2556651 3097060 BPSS1880 Burkholderia pseudomallei K96243 Na+/H+ antiporter membrane protein YP_111886.1 2555071 R 272560 CDS YP_111887.1 53722902 3096047 complement(2556811..2558097) 1 NC_006351.1 Similar to Escherichia coli hypothetical protein YjiN or b4336 SWALL:YJIN_ECOLI (SWALL:P39385) (426 aa) fasta scores: E(): 1.1e-85, 54.34% id in 414 aa, and to Salmonella typhi membrane protein sty4873 SWALL:Q8Z0X2 (EMBL:AL627284) (423 aa) fasta scores: E(): 2.2e-85, 53.86% id in 414 aa; hypothetical protein 2558097 3096047 BPSS1881 Burkholderia pseudomallei K96243 hypothetical protein YP_111887.1 2556811 R 272560 CDS YP_111888.1 53722903 3096183 complement(2558138..2558563) 1 NC_006351.1 Similar to Ralstonia solanacearum probable acetyltransferase rsp0265 or rs03701 SWALL:Q8XT50 (EMBL:AL646077) (184 aa) fasta scores: E(): 1.4e-07, 41.28% id in 109 aa, and to Myxococcus xanthus ActC SWALL:Q93P57 (EMBL:AF350253) (437 aa) fasta scores: E(): 1.7e-06, 37.31% id in 134 aa; acetyltransferase 2558563 3096183 BPSS1882 Burkholderia pseudomallei K96243 acetyltransferase YP_111888.1 2558138 R 272560 CDS YP_111889.1 53722904 3096184 2558842..2560494 1 NC_006351.1 Similar to Xanthomonas axonopodis cardiolipin synthase Cls or xac2871 SWALL:AAM37716 (EMBL:AE011929) (520 aa) fasta scores: E(): 1.5e-61, 41.13% id in 530 aa, and to Pseudomonas aeruginosa hypothetical protein pa5310 SWALL:Q9HTP4 (EMBL:AE004943) (529 aa) fasta scores: E(): 1.7e-61, 40.15% id in 528 aa; hypothetical protein 2560494 3096184 BPSS1883 Burkholderia pseudomallei K96243 hypothetical protein YP_111889.1 2558842 D 272560 CDS YP_111890.1 53722905 3097008 complement(2560561..2560977) 1 NC_006351.1 Similar to Ralstonia solanacearum HIT-like protein rsp0494 or rs00372 SWALL:Q8XSI0 (EMBL:AL646079) (144 aa) fasta scores: E(): 6.9e-29, 58.08% id in 136 aa, and to Caulobacter crescentus HIT family protein cc2470 SWALL:Q9A5H7 (EMBL:AE005916) (144 aa) fasta scores: E(): 7.9e-23, 50.72% id in 138 aa; hypothetical protein 2560977 3097008 BPSS1884 Burkholderia pseudomallei K96243 hypothetical protein YP_111890.1 2560561 R 272560 CDS YP_111891.1 53722906 3097009 complement(2561180..2562421) 1 NC_006351.1 Similar to Rhodococcus erythropolis rhodocoxin reductase ThcD SWALL:THCD_RHOER (SWALL:P43494) (426 aa) fasta scores: E(): 1.7e-39, 37.1% id in 407 aa, and to Escherichia coli 3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component (EC 1.18.1.3) HcaD or PhdA or HcaA4 or b2542 SWALL:HCAD_ECOLI (SWALL:P77650) (400 aa) fasta scores: E(): 4.7e-38, 37.83% id in 407 aa; aromatic hydrocarbons catabolism-related reductase 2562421 3097009 BPSS1885 Burkholderia pseudomallei K96243 aromatic hydrocarbons catabolism-related reductase YP_111891.1 2561180 R 272560 CDS YP_111892.1 53722907 3094939 complement(2562408..2562737) 1 NC_006351.1 Similar to Pseudomonas aeruginosa naphthalene 1,2-dioxygenase system ferredoxin component NdoA or PahA2 SWALL:NDOA_PSEAE (SWALL:Q51493) (103 aa) fasta scores: E(): 2.8e-13, 44% id in 100 aa, and to Pseudomonas putida, and Pseudomonas sp. naphthalene 1,2-dioxygenase system ferredoxin component NdoA or NahAB or DoxA or NdoC1 SWALL:NDOA_PSEPU (SWALL:P23082) (103 aa) fasta scores: E(): 1.1e-12, 42.26% id in 97 aa; aromatic hydrocarbons catabolism-related dioxygenase 2562737 3094939 BPSS1886 Burkholderia pseudomallei K96243 aromatic hydrocarbons catabolism-related dioxygenase YP_111892.1 2562408 R 272560 CDS YP_111893.1 53722908 3094896 complement(2562759..2563256) 1 NC_006351.1 Similar to Sphingomonas aromaticivorans small subunit aromatic oxygenase BphA2D SWALL:O85985 (EMBL:AF079317) (162 aa) fasta scores: E(): 7.8e-27, 50.36% id in 137 aa, and to Pseudomonas aeruginosa ortho-halobenzoate 1,2-dioxygenase beta-isp protein OhbA SWALL:Q9Z5W2 (EMBL:AF121970) (176 aa) fasta scores: E(): 8.4e-27, 48.36% id in 153 aa. Note: The N-terminal region of this CDS does not present similarities with the database matches hit by the rest of the CDS; aromatic oxygenase 2563256 3094896 BPSS1887 Burkholderia pseudomallei K96243 aromatic oxygenase YP_111893.1 2562759 R 272560 CDS YP_111894.1 53722909 3094897 complement(2563271..2564527) 1 NC_006351.1 Similar to Sphingomonas aromaticivorans large subunit aromatic oxygenase BphA1C SWALL:O85993 (EMBL:AF079317) (420 aa) fasta scores: E(): 5e-83, 49.88% id in 419 aa, and to Pseudomonas aeruginosa O-halobenzoate 1,2-dioxygenase large subunit OhbA SWALL:Q93AD8 (EMBL:AF422937) (401 aa) fasta scores: E(): 8.3e-72, 46.34% id in 397 aa; aromatic oxygenase 2564527 3094897 BPSS1888 Burkholderia pseudomallei K96243 aromatic oxygenase YP_111894.1 2563271 R 272560 CDS YP_111895.1 53722910 3097234 2564727..2565767 1 NC_006351.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsc1832 or rs04267 SWALL:Q8XYC6 (EMBL:AL646067) (342 aa) fasta scores: E(): 1.7e-19, 33.62% id in 348 aa, and to Pseudomonas putida xylDLEGF operon transcriptional activator 1 XylS1 SWALL:XYS1_PSEPU (SWALL:Q04710) (321 aa) fasta scores: E(): 2.4e-14, 30.53% id in 298 aa. Possible alternative translational start sites.; AraC family transcriptional regulator 2565767 3097234 BPSS1889 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111895.1 2564727 D 272560 CDS YP_111896.1 53722911 3096978 complement(2565817..2566704) 1 NC_006351.1 Similar to Acinetobacter lwoffii probable cat1 operon transcriptional activator SWALL:CATR_ACILW (SWALL:O33945) (303 aa) fasta scores: E(): 5.3e-46, 47.29% id in 296 aa, and to Burkholderia sp. NK8 LysR-type transcriptional regulatory protein CbeR SWALL:Q9AQS6 (EMBL:AB024746) (306 aa) fasta scores: E(): 2.5e-53, 55.19% id in 279 aa; LysR family transcriptional regulator 2566704 3096978 BPSS1890 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111896.1 2565817 R 272560 CDS YP_111897.1 53722912 3096549 2566794..2567927 1 NC_006351.1 Similar to Acinetobacter lwoffii muconate cycloisomerase I 1 CatB1 SWALL:CTB1_ACILW (SWALL:O33946) (379 aa) fasta scores: E(): 7.3e-80, 62.53% id in 371 aa, and to Burkholderia sp. TH2 cis,cis-muconate lactonizing enzyme CatB2 SWALL:BAC16768 (EMBL:AB035325) (395 aa) fasta scores: E(): 3.5e-92, 73.76% id in 343 aa; muconate cycloisomerase I 2567927 catB 3096549 catB Burkholderia pseudomallei K96243 muconate cycloisomerase I YP_111897.1 2566794 D 272560 CDS YP_111898.1 53722913 3096516 2567962..2568864 1 NC_006351.1 Similar to Acinetobacter lwoffii catechol 1,2-dioxygenase 2 CatA2 SWALL:CTA2_ACILW (SWALL:O33950) (275 aa) fasta scores: E(): 4.6e-84, 81.22% id in 261 aa, and to Burkholderia sp. TH2 catechol 1,2-dioxygenase CatA2 SWALL:BAC16769 (EMBL:AB035325) (300 aa) fasta scores: E(): 3.4e-90, 74.66% id in 300 aa; catechol 1,2-dioxygenase 2568864 catA 3096516 catA Burkholderia pseudomallei K96243 catechol 1,2-dioxygenase YP_111898.1 2567962 D 272560 CDS YP_111899.1 53722914 3096616 2568902..2569192 1 NC_006351.1 Similar to Acinetobacter lwoffii muconolactone delta-isomerase 2 CatC2 SWALL:CTC2_ACILW (SWALL:O33951) (96 aa) fasta scores: E(): 2.9e-32, 80.2% id in 96 aa, and to Pseudomonas putida muconolactone delta-isomerase CatC SWALL:CATC_PSEPU (SWALL:P00948) (96 aa) fasta scores: E(): 4.4e-28, 73.95% id in 96 aa; muconolactone delta-isomerase 2569192 catC 3096616 catC Burkholderia pseudomallei K96243 muconolactone delta-isomerase YP_111899.1 2568902 D 272560 CDS YP_111900.1 53722915 3096541 complement(2569312..2569644) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri cytochrome O ubiquinol oxidase CyoD or b0429 or z0532 or ecs0483 or sf0370 SWALL:CYOD_ECOLI (SWALL:P18403) (109 aa) fasta scores: E(): 2.7e-16, 49.5% id in 101 aa, and to Pseudomonas putida cytochrome O ubiquinol oxidase CyoD SWALL:CYOD_PSEPU (SWALL:Q9WWR4) (110 aa) fasta scores: E(): 2.7e-15, 42.72% id in 110 aa; cytochrome O ubiquinol oxidase 2569644 cyoD 3096541 cyoD Burkholderia pseudomallei K96243 cytochrome O ubiquinol oxidase YP_111900.1 2569312 R 272560 CDS YP_111901.1 53722916 3096540 complement(2569645..2570238) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri cytochrome O ubiquinol oxidase subunit III CyoC or b0430 or c0541 or sf0371 SWALL:CYOC_ECOLI (SWALL:P18402) (204 aa) fasta scores: E(): 1.1e-41, 53.6% id in 194 aa, and to Pseudomonas putida cytochrome O ubiquinol oxidase subunit III CyoC SWALL:CYOC_PSEPU (SWALL:Q9WWR3) (207 aa) fasta scores: E(): 5.3e-44, 55.72% id in 192 aa; cytochrome O ubiquinol oxidase subunit III 2570238 cyoC 3096540 cyoC Burkholderia pseudomallei K96243 cytochrome O ubiquinol oxidase subunit III YP_111901.1 2569645 R 272560 CDS YP_111902.1 53722917 3096522 complement(2570253..2572265) 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ubiquinol oxidase polypeptide I CyoB or b0431 or c0542 or z0534 or ecs0485 SWALL:CYOB_ECOLI (SWALL:P18401) (663 aa) fasta scores: E(): 1.5e-189, 67.22% id in 653 aa, and to Acetobacter aceti ubiquinol oxidase polypeptide I precursor CyaA SWALL:QOX1_ACEAC (SWALL:P98009) (664 aa) fasta scores: E(): 4.4e-197, 69.06% id in 666 aa; ubiquinol oxidase polypeptide I 2572265 cyoB 3096522 cyoB Burkholderia pseudomallei K96243 ubiquinol oxidase polypeptide I YP_111902.1 2570253 R 272560 CDS YP_111903.1 53722918 3096608 complement(2572268..2573155) 1 NC_006351.1 Similar to Escherichia coli, and Escherichia coli O6 ubiquinol oxidase polypeptide II precursor CyoA or b0432 or c0543 SWALL:CYOA_ECOLI (SWALL:P18400) (315 aa) fasta scores: E(): 6e-66, 55.9% id in 288 aa, and to Acetobacter aceti ubiquinol oxidase polypeptide II precursor CyaB SWALL:QOX2_ACEAC (SWALL:P50653) (307 aa) fasta scores: E(): 7.3e-73, 63.76% id in 287 aa; ubiquinol oxidase polypeptide II precursor 2573155 cyoA 3096608 cyoA Burkholderia pseudomallei K96243 ubiquinol oxidase polypeptide II precursor YP_111903.1 2572268 R 272560 CDS YP_111904.1 53722919 3094934 complement(2573880..2575913) 1 NC_006351.1 Similar to Escherichia coli 2,4-dienoyl-CoA reductase [NADPH] FadH or b3081 SWALL:FADH_ECOLI (SWALL:P42593) (671 aa) fasta scores: E(): 3e-151, 60.71% id in 672 aa, and to Pseudomonas aeruginosa 2,4-dienoyl-CoA reductase FadH1 or pa3092 SWALL:Q9HZB6 (EMBL:AE004733) (679 aa) fasta scores: E(): 4.9e-170, 65.73% id in 677 aa; 2,4-dienoyl-CoA reductase 2575913 fadH 3094934 fadH Burkholderia pseudomallei K96243 2,4-dienoyl-CoA reductase YP_111904.1 2573880 R 272560 CDS YP_111905.1 53722920 3096979 2576063..2577115 1 NC_006351.1 Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 2.5e-27, 33.23% id in 346 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 1.7e-20, 29.88% id in 338 aa; AraC family transcriptional regulator 2577115 3096979 BPSS1899 Burkholderia pseudomallei K96243 AraC family transcriptional regulator YP_111905.1 2576063 D 272560 CDS YP_111906.1 53722921 3095653 complement(2577069..2578016) 1 NC_006351.1 Similar to Xanthomonas axonopodis transcriptional regulator LysR family xac4038 SWALL:Q8PFE5 (EMBL:AE012052) (304 aa) fasta scores: E(): 2e-63, 62.45% id in 293 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family atu2191 or agr_c_3985 SWALL:Q8UDD6 (EMBL:AE009170) (314 aa) fasta scores: E(): 5.2e-57, 53.87% id in 310 aa; LysR family transcriptional regulator 2578016 3095653 BPSS1900 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111906.1 2577069 R 272560 CDS YP_111907.1 53722922 3095654 2578111..2579112 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein xac4039 SWALL:Q8PFE4 (EMBL:AE012052) (330 aa) fasta scores: E(): 2.2e-79, 64.48% id in 321 aa, and to Ralstonia solanacearum hypothetical protein rsc3335 or rs02569 SWALL:Q8XU58 (EMBL:AL646074) (318 aa) fasta scores: E(): 9.4e-70, 59.04% id in 315 aa; hypothetical protein 2579112 3095654 BPSS1901 Burkholderia pseudomallei K96243 hypothetical protein YP_111907.1 2578111 D 272560 CDS YP_111908.1 53722923 3096458 complement(2579291..2580205) 1 NC_006351.1 Similar to Burkholderia sp. NK8 LysR-type transcriptional regulatory protein CbeR SWALL:Q9AQS6 (EMBL:AB024746) (306 aa) fasta scores: E(): 2.8e-94, 83.05% id in 301 aa, and to Acinetobacter calcoaceticus ben and cat operon transcriptional regulator BenM SWALL:BENM_ACICA (SWALL:O68014) (304 aa) fasta scores: E(): 8.9e-54, 47.69% id in 304 aa; LysR family transcriptional regulator 2580205 3096458 BPSS1902 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111908.1 2579291 R 272560 CDS YP_111909.1 53722924 3096099 2580429..2581796 1 NC_006351.1 Similar to Acinetobacter calcoaceticus benzoate 1,2-dioxygenase alpha subunit BenA SWALL:BENA_ACICA (SWALL:P07769) (461 aa) fasta scores: E(): 2.6e-150, 74.65% id in 438 aa, and to Pseudomonas putida benzoate 1,2-dioxygenase large subunit BenA SWALL:Q93SR8 (EMBL:AY026914) (455 aa) fasta scores: E(): 1.8e-142, 73.68% id in 437 aa; benzoate 1,2-dioxygenase subunit alpha 2581796 benA 3096099 benA Burkholderia pseudomallei K96243 benzoate 1,2-dioxygenase subunit alpha YP_111909.1 2580429 D 272560 CDS YP_111910.1 53722925 3097134 2581793..2582284 1 NC_006351.1 Similar to Acinetobacter calcoaceticus benzoate 1,2-dioxygenase beta subunit BenB SWALL:BENB_ACICA (SWALL:P07770) (169 aa) fasta scores: E(): 1.8e-48, 71.16% id in 163 aa, and to Pseudomonas putida benzoate 1,2-dioxygenase small subunit BenB SWALL:Q93SR7 (EMBL:AY026914) (162 aa) fasta scores: E(): 1.3e-42, 66.45% id in 155 aa; benzoate 1,2-dioxygenase subunit beta 2582284 benB 3097134 benB Burkholderia pseudomallei K96243 benzoate 1,2-dioxygenase subunit beta YP_111910.1 2581793 D 272560 CDS YP_111911.1 53722926 3097135 2582328..2583347 1 NC_006351.1 with BenAB catalyzes the formation of 2-hydro-1,2-dihydroxybenzoate from benzoate; benzoate 1,2-dioxygenase ferredoxin reductase subunit 2583347 benC 3097135 benC Burkholderia pseudomallei K96243 benzoate 1,2-dioxygenase ferredoxin reductase subunit YP_111911.1 2582328 D 272560 CDS YP_111912.1 53722927 3096088 2583344..2584138 1 NC_006351.1 catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 2584138 benD 3096088 benD Burkholderia pseudomallei K96243 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase YP_111912.1 2583344 D 272560 CDS YP_111913.1 53722928 3095515 complement(2584182..2585090) 1 NC_006351.1 Similar to Caulobacter crescentus carboxylesterase cc2298 SWALL:Q9A5Z9 (EMBL:AE005900) (289 aa) fasta scores: E(): 3.6e-36, 43.94% id in 289 aa, and to Xanthomonas campestris carboxylesterase xcc2285 SWALL:Q8P8F7 (EMBL:AE012336) (291 aa) fasta scores: E(): 7.3e-32, 44.07% id in 270 aa; hypothetical protein 2585090 3095515 BPSS1907 Burkholderia pseudomallei K96243 hypothetical protein YP_111913.1 2584182 R 272560 CDS YP_111914.1 53722929 3095516 2585463..2585948 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3067 SWALL:Q9HZE1 (EMBL:AE004731) (147 aa) fasta scores: E(): 3.7e-41, 80.82% id in 146 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv0880 or mt0903.1 or mtcy31.08 SWALL:Y880_MYCTU (SWALL:Q10542) (143 aa) fasta scores: E(): 4.2e-09, 36.23% id in 138 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; MarR family transcriptional regulator 2585948 3095516 BPSS1908 Burkholderia pseudomallei K96243 MarR family transcriptional regulator YP_111914.1 2585463 D 272560 CDS YP_111915.1 53722930 3096412 2585945..2586517 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3066 SWALL:Q9HZE2 (EMBL:AE004731) (190 aa) fasta scores: E(): 1e-53, 75.26% id in 190 aa, and to Ralstonia solanacearum hydrolase rsp0438 or rs00897 SWALL:Q8XSM9 (EMBL:AL646078) (197 aa) fasta scores: E(): 2.8e-10, 35.17% id in 145 aa; hypothetical protein 2586517 3096412 BPSS1909 Burkholderia pseudomallei K96243 hypothetical protein YP_111915.1 2585945 D 272560 CDS YP_111916.1 53722931 3096199 2586540..2587592 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3065 SWALL:Q9HZE3 (EMBL:AE004731) (328 aa) fasta scores: E(): 8e-70, 63.6% id in 327 aa; hypothetical protein 2587592 3096199 BPSS1910 Burkholderia pseudomallei K96243 hypothetical protein YP_111916.1 2586540 D 272560 CDS YP_111917.1 53722932 3096200 2588240..2589724 1 NC_006351.1 hypothetical protein 2589724 3096200 BPSS1911 Burkholderia pseudomallei K96243 hypothetical protein YP_111917.1 2588240 D 272560 CDS YP_111918.1 53722933 3096848 complement(2589898..2591118) 1 NC_006351.1 Similar to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 6.2e-138, 78.07% id in 406 aa, and to Ralstonia solanacearum ISrso15-transposase rsp1547 or rs02103 or rsc2573 or rs00774 SWALL:Q8XFK1 (EMBL:AL646085) (406 aa) fasta scores: E(): 8.5e-161, 91.62% id in 406 aa; IS1001 transposase 2591118 tnpA 3096848 tnpA Burkholderia pseudomallei K96243 IS1001 transposase YP_111918.1 2589898 R 272560 CDS YP_111919.1 53722934 3097029 complement(2591285..2592847) 1 NC_006351.1 Similar to Escherichia coli lysine-specific permease LysP or CadR (WALL:P25737) (488 aa) fasta scores: E(): 5.6e-145, 75.05% id in 477 aa, and to Ralstonia solanacearum probable lysine-specific permease transmembrane protein rsc1758 or rs02945 SWALL:Q8XYK0 (EMBL:AL646066) (512 aa) fasta scores: E(): 1.5e-152, 78.79% id in 481 aa; lysine-specific permease 2592847 lysP 3097029 lysP Burkholderia pseudomallei K96243 lysine-specific permease YP_111919.1 2591285 R 272560 CDS YP_111920.1 53722935 3096552 complement(2593487..2594377) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1542 SWALL:Q9I3H1 (EMBL:AE004582) (278 aa) fasta scores: E(): 5.1e-33, 39.2% id in 278 aa, and to Ralstonia solanacearum hypothetical protein rsp1030 or rs02367 SWALL:Q8XR38 (EMBL:AL646082) (250 aa) fasta scores: E(): 2.7e-09, 29.63% id in 243 aa; hypothetical protein 2594377 3096552 BPSS1914 Burkholderia pseudomallei K96243 hypothetical protein YP_111920.1 2593487 R 272560 CDS YP_111921.1 53722936 3096553 2595091..2596470 1 NC_006351.1 Similar to Pseudomonas putida metallo-beta-lactamase pp3291 SWALL:AAN68898 (EMBL:AE016786) (455 aa) fasta scores: E(): 5.1e-93, 54.48% id in 457 aa, and to Chlorobium tepidum metallo-beta-lactamase superfamily protein ct0598 SWALL:Q8KET4 (EMBL:AE012833) (469 aa) fasta scores: E(): 3e-57, 38.01% id in 463 aa; metallo-beta-lactamase 2596470 3096553 BPSS1915 Burkholderia pseudomallei K96243 metallo-beta-lactamase YP_111921.1 2595091 D 272560 CDS YP_111922.1 53722937 3095326 complement(2597063..2597809) 1 NC_006351.1 Similar to Alcaligenes eutrophus acetoacetyl-CoA reductase PhbB SWALL:PHBB_ALCEU (SWALL:P14697) (246 aa) fasta scores: E(): 2.4e-46, 55.32% id in 244 aa, and to Zoogloea ramigera acetoacetyl-CoA reductase PhbB SWALL:PHBB_ZOORA (SWALL:P23238) (241 aa) fasta scores: E(): 3.9e-42, 53.25% id in 246 aa; acetoacetyl-CoA reductase 2597809 phbB 3095326 phbB Burkholderia pseudomallei K96243 acetoacetyl-CoA reductase YP_111922.1 2597063 R 272560 CDS YP_111923.1 53722938 3097133 2598474..2599256 1 NC_006351.1 Similar to Ralstonia solanacearum probable transcription regulator protein rsc0190 or rs00622 SWALL:Q8Y2Z1 (EMBL:AL646057) (266 aa) fasta scores: E(): 5e-49, 51.75% id in 257 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri fumarate and nitrate reduction regulatory protein Fnr or NirR or b1334 or c1807 or z2433 or ecs1915 or sf1836 SWALL:FNR_ECOLI (SWALL:P03019) (250 aa) fasta scores: E(): 1.2e-33, 39.38% id in 226 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; Crp/Fnr family transcriptional regulator 2599256 3097133 BPSS1917 Burkholderia pseudomallei K96243 Crp/Fnr family transcriptional regulator YP_111923.1 2598474 D 272560 CDS YP_111924.1 53722939 3096927 complement(2599462..2600448) 1 NC_006351.1 Similar to Ralstonia solanacearum probable alcohol dehydrogenase-like oxidoreductase rsc1505 or rs03800 SWALL:Q8XZ99 (EMBL:AL646064) (334 aa) fasta scores: E(): 4.3e-81, 66.26% id in 329 aa, and to Bacillus stearothermophilus alcohol dehydrogenase SWALL:ADH3_BACST (SWALL:P42328) (339 aa) fasta scores: E(): 8.8e-32, 34.02% id in 338 aa; alcohol dehydrogenase 2600448 3096927 BPSS1918 Burkholderia pseudomallei K96243 alcohol dehydrogenase YP_111924.1 2599462 R 272560 CDS YP_111925.1 53722940 3096928 complement(2600448..2600675) 1 NC_006351.1 hypothetical protein 2600675 3096928 BPSS1919 Burkholderia pseudomallei K96243 hypothetical protein YP_111925.1 2600448 R 272560 CDS YP_111926.1 53722941 3097074 2601413..2601841 1 NC_006351.1 hypothetical protein 2601841 3097074 BPSS1920 Burkholderia pseudomallei K96243 hypothetical protein YP_111926.1 2601413 D 272560 CDS YP_111927.1 53722942 3097232 complement(2602227..2602550) 1 NC_006351.1 hypothetical protein 2602550 3097232 BPSS1921 Burkholderia pseudomallei K96243 hypothetical protein YP_111927.1 2602227 R 272560 CDS YP_111928.1 53722943 3097233 2602830..2603777 1 NC_006351.1 Similar to Brucella melitensis 3-isopropylmalate dehydrogenase bmeii0271 SWALL:Q8YDA7 (EMBL:AE009665) (276 aa) fasta scores: E(): 1.5e-37, 44.36% id in 284 aa, and to Caulobacter crescentus hypothetical protein cc0810 SWALL:Q9AA01 (EMBL:AE005757) (260 aa) fasta scores: E(): 6.7e-37, 48.47% id in 262 aa. Possible alternative translational start site after codon 23; hypothetical protein 2603777 3097233 BPSS1922 Burkholderia pseudomallei K96243 hypothetical protein YP_111928.1 2602830 D 272560 CDS YP_111929.1 53722944 3096349 2604114..2604503 1 NC_006351.1 hypothetical protein 2604503 3096349 BPSS1923 Burkholderia pseudomallei K96243 hypothetical protein YP_111929.1 2604114 D 272560 CDS YP_111930.1 53722945 3096350 complement(2605105..2605755) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc0189 or rs00621 SWALL:Q8Y2Z2 (EMBL:AL646057) (215 aa) fasta scores: E(): 5.2e-36, 51.64% id in 213 aa, and to Escherichia coli, and Escherichia coli O6 osmotically inducible protein Y precursor OsmY or b4376 or c5457 SWALL:OSMY_ECOLI (SWALL:P27291) (201 aa) fasta scores: E(): 0.0034, 28.33% id in 180 aa; hypothetical protein 2605755 3096350 BPSS1924 Burkholderia pseudomallei K96243 hypothetical protein YP_111930.1 2605105 R 272560 CDS YP_111931.1 53722946 3095579 complement(2606114..2607292) 1 NC_006351.1 hypothetical protein 2607292 3095579 BPSS1925 Burkholderia pseudomallei K96243 hypothetical protein YP_111931.1 2606114 R 272560 CDS YP_111932.1 53722947 3095059 complement(2607590..2608234) 1 NC_006351.1 Similar to Bacillus halodurans probable adenylylsulfate kinase bh1489 SWALL:CYC1_BACHD (SWALL:Q9KCT0) (202 aa) fasta scores: E(): 1e-31, 48.24% id in 199 aa, and to Klebsiella aerogenes APS kinase CysC SWALL:Q9EYY1 (EMBL:AF308468) (201 aa) fasta scores: E(): 2.1e-29, 49.73% id in 189 aa; denylylsulfate kinase 2608234 3095059 BPSS1926 Burkholderia pseudomallei K96243 denylylsulfate kinase YP_111932.1 2607590 R 272560 CDS YP_111933.1 53722948 3095060 complement(2608475..2610166) 1 NC_006351.1 Similar to C-terminal region similar to C-terminal region of Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 1.7e-49, 47.9% id in 405 aa, and full length similar to Rahnella aquatilis methyl-accepting chemotaxis protein I SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 2.9e-63, 43.33% id in 540 aa; methyl-accepting chemotaxis protein 2610166 3095060 BPSS1927 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis protein YP_111933.1 2608475 R 272560 CDS YP_111934.1 53722949 3097076 2611158..2611997 1 NC_006351.1 Weakly similar to Streptomyces coelicolor polysaccharide deacetylase sco2710 or scc61a.31 SWALL:Q9KYG2 (EMBL:AL939113) (229 aa) fasta scores: E(): 4.1e-06, 28.21% id in 241 aa, and to Staphylococcus caprae IcaB SWALL:Q9AIQ6 (EMBL:AF246926) (289 aa) fasta scores: E(): 5.9e-06, 21.79% id in 234 aa; hypothetical protein 2611997 3097076 BPSS1928 Burkholderia pseudomallei K96243 hypothetical protein YP_111934.1 2611158 D 272560 CDS YP_111935.1 53722950 3096360 complement(2612032..2613516) 1 NC_006351.1 Similar to Chlorobium tepidum ABC-type export system, outer membrane channel protein ct0554 SWALL:AAM71796 (EMBL:AE012830) (500 aa) fasta scores: E(): 9.1e-73, 47.88% id in 472 aa, and to Ralstonia solanacearum probable outer membrane channel lipoprotein rsc0166 or rs01036 SWALL:Q8Y315 (EMBL:AL646057) (480 aa) fasta scores: E(): 7.8e-59, 44% id in 475 aa; outer membrane lipoprotein 2613516 3096360 BPSS1929 Burkholderia pseudomallei K96243 outer membrane lipoprotein YP_111935.1 2612032 R 272560 CDS YP_111936.1 53722951 3096361 complement(2613494..2614579) 1 NC_006351.1 Similar to Chlorobium tepidum ABC-type export system, membrane fusion protein ct0553 SWALL:AAM71795 (EMBL:AE012830) (314 aa) fasta scores: E(): 1.8e-24, 46.92% id in 358 aa, and to Escherichia coli hypothetical membrane protein YbhG or b0795 SWALL:YBHG_ECOLI (SWALL:P75777) (332 aa) fasta scores: E(): 1.9e-07, 30.1% id in 299 aa; ABC transport system, exported protein 2614579 3096361 BPSS1930 Burkholderia pseudomallei K96243 ABC transport system, exported protein YP_111936.1 2613494 R 272560 CDS YP_111937.1 53722952 3095608 complement(2614576..2615274) 1 NC_006351.1 Similar to Chlorobium tepidum ABC-type export system, ATP-binding subunit ct0552 SWALL:AAM71794 (EMBL:AE012830) (239 aa) fasta scores: E(): 2.7e-53, 68.26% id in 230 aa, and to Bacillus halodurans ABC transporter bh2699 SWALL:Q9K9E9 (EMBL:AP001516) (251 aa) fasta scores: E(): 4e-25, 38.46% id in 221 aa; ABC transporter ATP-binding protein 2615274 3095608 BPSS1931 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_111937.1 2614576 R 272560 CDS YP_111938.1 53722953 3095609 complement(2615277..2616413) 1 NC_006351.1 Similar to Chlorobium tepidum ABC-type export system, membrane protein ct0551 SWALL:AAM71793 (EMBL:AE012830) (384 aa) fasta scores: E(): 1e-92, 64.28% id in 378 aa, and to Deinococcus radiodurans hypothetical protein dr0474 SWALL:Q9RX41 (EMBL:AE001906) (386 aa) fasta scores: E(): 2.5e-07, 24.61% id in 386 aa; ABC transporter membrane protein 2616413 3095609 BPSS1932 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_111938.1 2615277 R 272560 CDS YP_111939.1 53722954 3097159 complement(2616410..2616661) 1 NC_006351.1 hypothetical protein 2616661 3097159 BPSS1933 Burkholderia pseudomallei K96243 hypothetical protein YP_111939.1 2616410 R 272560 CDS YP_111940.1 53722955 3096674 complement(2616694..2617164) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp1561 or rs02117 SWALL:Q8XPS7 (EMBL:AL646085) (151 aa) fasta scores: E(): 1.5e-20, 49.66% id in 147 aa, and to Methanosarcina acetivorans universal stress protein ma4094 SWALL:Q8TIP8 (EMBL:AE011122) (153 aa) fasta scores: E(): 3.5e-11, 37.33% id in 150 aa. Note There is a possible alternative start codon 45 amino acid residues upstream; universal stress protein 2617164 3096674 BPSS1934 Burkholderia pseudomallei K96243 universal stress protein YP_111940.1 2616694 R 272560 CDS YP_111941.1 53722956 3096675 complement(2617380..2618246) 1 NC_006351.1 Similar to the N-terminal region of Ralstonia solanacearum transcription regulator protein rsp1164 or rs05643 SWALL:Q8XQQ7 (EMBL:AL646083) (233 aa) fasta scores: E(): 2e-05, 57.53% id in 73 aa, and very low similarity to the full length Rhizobium loti transcriptional regulator mll4816 SWALL:Q98D84 (EMBL:AP003005) (244 aa) fasta scores: E(): 0.047, 27.14% id in 221 aa; TetR family transcriptional regulator 2618246 3096675 BPSS1935 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_111941.1 2617380 R 272560 CDS YP_111942.1 53722957 3096705 2618540..2620066 1 NC_006351.1 Similar to Caulobacter crescentus efflux system protein cc0806 SWALL:Q9AA05 (EMBL:AE005757) (467 aa) fasta scores: E(): 3.7e-62, 44.9% id in 461 aa, and to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 3.7e-61, 42.56% id in 484 aa. CDS is extended at the N-terminus in comparison to orthologues; outer membrane efflux protein 2620066 3096705 BPSS1936 Burkholderia pseudomallei K96243 outer membrane efflux protein YP_111942.1 2618540 D 272560 CDS YP_111943.1 53722958 3097157 2620063..2621136 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa5232 SWALL:Q9HTV8 (EMBL:AE004935) (357 aa) fasta scores: E(): 4.4e-67, 60.51% id in 352 aa, and to Escherichia coli hypothetical protein precursor YhiI or b3487 SWALL:YHII_ECOLI (SWALL:P37626) (355 aa) fasta scores: E(): 1.3e-63, 58.4% id in 351 aa; ABC transport system, exported protein 2621136 3097157 BPSS1937 Burkholderia pseudomallei K96243 ABC transport system, exported protein YP_111943.1 2620063 D 272560 CDS YP_111944.1 53722959 3097158 2621133..2624357 1 NC_006351.1 Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YhiH or b3486 SWALL:YHIH_ECOLI (SWALL:P37624) (894 aa) fasta scores: E(): 2.2e-102, 56.16% id in 1063 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu4667 or agr_l_430 SWALL:Q8U6Y9 (EMBL:AE009395) (930 aa) fasta scores: E(): 1.4e-101, 55.46% id in 1071 aa. Note: This CDS presents no similarities in the database matches between approx. residue 510 and approx. residue 690; ABC transporter ATP-binding protein 2624357 3097158 BPSS1938 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_111944.1 2621133 D 272560 CDS YP_111945.1 53722960 3095122 2624360..2625484 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri hypothetical protein YhhJ or b3485 or sf3501 SWALL:YHHJ_ECOLI (SWALL:P31993) (374 aa) fasta scores: E(): 8.7e-92, 61.76% id in 374 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa5230 SWALL:Q9HTW0 (EMBL:AE004935) (374 aa) fasta scores: E(): 6.6e-91, 63.1% id in 374 aa; ABC transporter membrane protein 2625484 3095122 BPSS1939 Burkholderia pseudomallei K96243 ABC transporter membrane protein YP_111945.1 2624360 D 272560 CDS YP_111946.1 53722961 3095123 2625634..2627469 1 NC_006351.1 Similar to Caulobacter crescentus sensory box histidine kinase/response regulator cc3225 SWALL:Q9A3H9 (EMBL:AE005986) (731 aa) fasta scores: E(): 9.5e-57, 35.17% id in 688 aa, and to Pseudomonas putida sensor histidine kinase/response regulator pp3651 SWALL:AAN69251 (EMBL:AE016787) (727 aa) fasta scores: E(): 6.1e-51, 33.19% id in 729 aa; sensor kinase/response regulator fusion protein 2627469 3095123 BPSS1940 Burkholderia pseudomallei K96243 sensor kinase/response regulator fusion protein YP_111946.1 2625634 D 272560 CDS YP_111947.1 53722962 3097050 complement(2627825..2629390) 1 NC_006351.1 Similar to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 4.1e-44, 42.75% id in 414 aa, and to Ralstonia solanacearum methyl-accepting chemotaxis transducer transmembrane protein rsp1099 or rs02605 SWALL:Q8XQW9 (EMBL:AL646082) (513 aa) fasta scores: E(): 2.4e-84, 50.09% id in 515 aa; methyl-accepting chemotaxis transducer transmembrane protein 2629390 3097050 BPSS1941 Burkholderia pseudomallei K96243 methyl-accepting chemotaxis transducer transmembrane protein YP_111947.1 2627825 R 272560 CDS YP_111948.1 53722963 3097136 2629931..2630440 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein rsc0339 or rs03306 SWALL:Q8Y2J6 (EMBL:AL646058) (171 aa) fasta scores: E(): 4.6e-23, 46.78% id in 171 aa, and to Xanthomonas campestris hypothetical protein xcc3810 SWALL:AAM43484 (EMBL:AE012502) (165 aa) fasta scores: E(): 4.5e-13, 36% id in 150 aa; hypothetical protein 2630440 3097136 BPSS1942 Burkholderia pseudomallei K96243 hypothetical protein YP_111948.1 2629931 D 272560 CDS YP_111949.1 53722964 3097137 complement(2630498..2631001) 1 NC_006351.1 hypothetical protein 2631001 3097137 BPSS1943 Burkholderia pseudomallei K96243 hypothetical protein YP_111949.1 2630498 R 272560 CDS YP_111950.1 53722965 3096266 complement(2631078..2632103) 1 NC_006351.1 Similar to Rhizobium meliloti alcohol dehydrogenase AdhA or ra0704 or sma1296 SWALL:ADHA_RHIME (SWALL:O31186) (340 aa) fasta scores: E(): 3e-84, 64.37% id in 334 aa, and to Brucella melitensis alcohol dehydrogenase bmei1746 SWALL:Q8YEY1 (EMBL:AE009608) (373 aa) fasta scores: E(): 4.7e-95, 72.35% id in 340 aa; alcohol dehydrogenase 2632103 adhA 3096266 adhA Burkholderia pseudomallei K96243 alcohol dehydrogenase YP_111950.1 2631078 R 272560 CDS YP_111951.1 53722966 3097127 complement(2632318..2633166) 1 NC_006351.1 Similar to Thiobacillus ferrooxidans ATP synthase gamma chain AtpG SWALL:ATPG_THIFE (SWALL:P41169) (298 aa) fasta scores: E(): 4.9e-06, 24.91% id in 281 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri ATP synthase gamma chain AtpG or UncG or PapC or b3733 or c4659 or z5231 or ecs4675 or sf3813 SWALL:ATPG_ECOLI (SWALL:P00837) (287 aa) fasta scores: E(): 0.00014, 22.66% id in 278 aa; ATP synthase subunit gamma 2633166 atpG 3097127 atpG Burkholderia pseudomallei K96243 ATP synthase subunit gamma YP_111951.1 2632318 R 272560 CDS YP_111952.1 53722967 3096069 complement(2633163..2635163) 1 NC_006351.1 produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 2635163 atpA 3096069 atpA Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit alpha YP_111952.1 2633163 R 272560 CDS YP_111953.1 53722968 3096663 complement(2635147..2635896) 1 NC_006351.1 Similar to the N-terminal region of Methanosarcina barkeri ATP synthase B subunit AtpF SWALL:O31081 (EMBL:AF028006) (386 aa) fasta scores: E(): 3.2e-08, 26.98% id in 252 aa, and of Methanosarcina acetivorans H(+)-transporting ATP synthase, subunit B ma2435 SWALL:Q8TN58 (EMBL:AE010936) (329 aa) fasta scores: E(): 2.8e-07, 26.12% id in 245 aa; ATP synthase subunit B 2635896 3096663 BPSS1947 Burkholderia pseudomallei K96243 ATP synthase subunit B YP_111953.1 2635147 R 272560 CDS YP_111954.1 53722969 3095796 complement(2635910..2636158) 1 NC_006351.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 2636158 atpE 3095796 atpE Burkholderia pseudomallei K96243 F0F1 ATP synthase subunit C YP_111954.1 2635910 R 272560 CDS YP_111955.1 53722970 3096761 complement(2636155..2636856) 1 NC_006351.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 2636856 3096761 BPSS1949 Burkholderia pseudomallei K96243 F0F1 ATP synthase subunit A YP_111955.1 2636155 R 272560 CDS YP_111956.1 53722971 3096762 complement(2636853..2637152) 1 NC_006351.1 hypothetical protein 2637152 3096762 BPSS1950 Burkholderia pseudomallei K96243 hypothetical protein YP_111956.1 2636853 R 272560 CDS YP_111957.1 53722972 3096854 complement(2637154..2637630) 1 NC_006351.1 Very low similarity to Methanosarcina barkeri ATP synthase gene 1 AtpI SWALL:O31077 (EMBL:AF028006) (112 aa) fasta scores: E(): 0.0029, 27% id in 100 aa, and to Chlorobium tepidum ATP synthase, ct1031 SWALL:AAM72264 (EMBL:AE012866) (107 aa) fasta scores: E(): 0.0093, 25.77% id in 97 aa; ATP synthesis-related protein 2637630 3096854 BPSS1951 Burkholderia pseudomallei K96243 ATP synthesis-related protein YP_111957.1 2637154 R 272560 CDS YP_111958.1 53722973 3096855 complement(2637651..2638106) 1 NC_006351.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit epsilon 2638106 3096855 BPSS1952 Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit epsilon YP_111958.1 2637651 R 272560 CDS YP_111959.1 53722974 3096070 complement(2638096..2639631) 1 NC_006351.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 2639631 atpD 3096070 atpD Burkholderia pseudomallei K96243 ATP synthase F0F1 subunit beta YP_111959.1 2638096 R 272560 CDS YP_111960.1 53722975 3095531 2640073..2641866 1 NC_006351.1 Similar to Azorhizobium caulinodans poly-beta-hydroxybutyrate polymerase PhbC SWALL:PHBC_AZOCA (SWALL:O66392) (583 aa) fasta scores: E(): 2e-73, 40.23% id in 517 aa, and to Methylobacterium extorquens poly(3-hydroxyalkanoate) polymerase PhaC SWALL:PHAC_METEX (SWALL:P52070) (605 aa) fasta scores: E(): 1e-72, 40.74% id in 535 aa; polymerase 2641866 3095531 BPSS1954 Burkholderia pseudomallei K96243 polymerase YP_111960.1 2640073 D 272560 CDS YP_111961.1 53722976 3095722 2641877..2643280 1 NC_006351.1 Catalyses the synthesis of acetylphosphate from acetyl-CoA and inorganic phosphate; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 2643280 3095722 BPSS1955 Burkholderia pseudomallei K96243 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_111961.1 2641877 D 272560 CDS YP_111962.1 53722977 3095723 2643277..2644455 1 NC_006351.1 Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation; acetate kinase 2644455 3095723 BPSS1956 Burkholderia pseudomallei K96243 acetate kinase YP_111962.1 2643277 D 272560 CDS YP_111963.1 53722978 3095075 complement(2645187..2646128) 1 NC_006351.1 Similar to Escherichia coli 6-phosphofructokinase isozyme 2 PfkB or b1723 SWALL:K6P2_ECOLI (SWALL:P06999) (309 aa) fasta scores: E(): 1.8e-31, 39.48% id in 309 aa, and to Salmonella typhimurium 6-phosphofructokinase II Pfkb or stm1326 SWALL:Q8ZPT5 (EMBL:AE008757) (310 aa) fasta scores: E(): 7e-32, 39.15% id in 309 aa; 6-phosphofructokinase 2646128 3095075 BPSS1957 Burkholderia pseudomallei K96243 6-phosphofructokinase YP_111963.1 2645187 R 272560 CDS YP_111964.1 53722979 3096375 complement(2646621..2647268) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc0189 or rs00621 SWALL:Q8Y2Z2 (EMBL:AL646057) (215 aa) fasta scores: E(): 1e-29, 46.75% id in 216 aa, and very low similarity to Escherichia coli, and Escherichia coli O6 osmotically inducible protein Y precursor OsmY or b4376 or c5457 SWALL:OSMY_ECOLI (SWALL:P27291) (201 aa) fasta scores: E(): 0.00021, 31.72% id in 145 aa; hypothetical protein 2647268 3096375 BPSS1958 Burkholderia pseudomallei K96243 hypothetical protein YP_111964.1 2646621 R 272560 CDS YP_111965.1 53722980 3096617 complement(2647883..2648275) 1 NC_006351.1 Similar to Bacillus subtilis cytidine deaminase Cdd SWALL:CDD_BACSU (SWALL:P19079) (136 aa) fasta scores: E(): 3.4e-25, 55.9% id in 127 aa, and to Thermoanaerobacter tengcongensis cytidine deaminase tte0462 SWALL:Q8RCG7 (EMBL:AE013017) (135 aa) fasta scores: E(): 6.1e-27, 58.4% id in 125 aa; cytidine deaminase 2648275 cdd 3096617 cdd Burkholderia pseudomallei K96243 cytidine deaminase YP_111965.1 2647883 R 272560 CDS YP_111966.1 53722981 3097221 complement(2648584..2649906) 1 NC_006351.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 2649906 deoA 3097221 deoA Burkholderia pseudomallei K96243 thymidine phosphorylase YP_111966.1 2648584 R 272560 CDS YP_111967.1 53722982 3096376 2650594..2650773 1 NC_006351.1 hypothetical protein 2650773 3096376 BPSS1961 Burkholderia pseudomallei K96243 hypothetical protein YP_111967.1 2650594 D 272560 CDS YP_111968.1 53722983 3096510 complement(2651073..2651855) 1 NC_006351.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 2651855 deoC 3096510 deoC Burkholderia pseudomallei K96243 deoxyribose-phosphate aldolase YP_111968.1 2651073 R 272560 CDS YP_111969.1 53722984 3095752 complement(2651869..2653143) 1 NC_006351.1 Similar to Yersinia pestis Na+ dependent nucleoside transporter-family protein ypo0435 SWALL:Q8ZIQ5 (EMBL:AJ414142) (423 aa) fasta scores: E(): 3.7e-85, 57.68% id in 423 aa, and to Escherichia coli hypothetical transport protein YeiM or b2164 SWALL:YEIM_ECOLI (SWALL:P33024) (416 aa) fasta scores: E(): 1.3e-81, 55.18% id in 424 aa; nucleoside transport related membrane protein 2653143 3095752 BPSS1963 Burkholderia pseudomallei K96243 nucleoside transport related membrane protein YP_111969.1 2651869 R 272560 CDS YP_111970.1 53722985 3095753 complement(2653661..2654914) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa3036 SWALL:Q9HZH2 (EMBL:AE004728) (310 aa) fasta scores: E(): 2.6e-45, 49.19% id in 311 aa, and to Rhizobium meliloti hypothetical protein rb0009 or smb20006 SWALL:Q92XF2 (EMBL:AL603642) (317 aa) fasta scores: E(): 3.5e-41, 48.14% id in 297 aa. Note: C-terminal region presents no simi;arities to any of the database macthes and contains repeat regions; hypothetical protein 2654914 3095753 BPSS1964 Burkholderia pseudomallei K96243 hypothetical protein YP_111970.1 2653661 R 272560 CDS YP_111971.1 53722986 3095850 complement(2655043..2655687) 1 NC_006351.1 Similar to Pseudomonas putida glutathione S-transferase pp1162 SWALL:AAN66786 (EMBL:AE016778) (209 aa) fasta scores: E(): 5.7e-46, 63.18% id in 201 aa, and to Rhizobium leguminosarum GstA protein SWALL:GSTA_RHILE (SWALL:Q52828) (203 aa) fasta scores: E(): 1.6e-41, 57.5% id in 200 aa; glutathione S-transferase 2655687 3095850 BPSS1965 Burkholderia pseudomallei K96243 glutathione S-transferase YP_111971.1 2655043 R 272560 CDS YP_111972.1 53722987 3095916 2655961..2656866 1 NC_006351.1 Similar to Pseudomonas aeruginosa transcriptional regulator PtxR or pa2258 SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 4.6e-30, 39.73% id in 297 aa, and to Rhizobium loti transcriptional regulator mlr3418 SWALL:Q98GA5 (EMBL:AP003001) (311 aa) fasta scores: E(): 4.2e-38, 43.68% id in 293 aa; LysR family transcriptional regulator 2656866 3095916 BPSS1966 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_111972.1 2655961 D 272560 CDS YP_111973.1 53722988 3095917 complement(2657077..2657730) 1 NC_006351.1 Similar to Streptomyces coelicolor TetR-family transcriptional regulator sco0745 or scf81.04C SWALL:Q9RJE7 (EMBL:AL939106) (219 aa) fasta scores: E(): 4.2e-05, 28.64% id in 192 aa, and to Mycobacterium tuberculosis hypothetical protein rv0825c rv0825c or mt0847 or mtv043.17C SWALL:O53836 (EMBL:AL022004) (239 aa) fasta scores: E(): 5.2e-05, 29.06% id in 203 aa; TetR family transcriptional regulator 2657730 3095917 BPSS1967 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_111973.1 2657077 R 272560 CDS YP_111974.1 53722989 3096358 2657833..2658741 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa1537 SWALL:Q9I3H6 (EMBL:AE004582) (295 aa) fasta scores: E(): 1.1e-54, 52.57% id in 291 aa, and to Mycobacterium tuberculosis oxidoreductase rv3085 or mtv013.06 or mt3170 SWALL:O53302 (EMBL:AL021309) (276 aa) fasta scores: E(): 1.4e-44, 48.18% id in 276 aa; dehydrogenase 2658741 3096358 BPSS1968 Burkholderia pseudomallei K96243 dehydrogenase YP_111974.1 2657833 D 272560 CDS YP_111975.1 53722990 3096359 2658738..2660336 1 NC_006351.1 Similar to Caulobacter crescentus monooxygenase, flavin-binding family cc2569 SWALL:Q9A588 (EMBL:AE005925) (498 aa) fasta scores: E(): 4.8e-120, 61% id in 500 aa, and to Emericella nidulans sterigmatocystin biosynthesis monooxygenase StcW SWALL:STCW_EMENI (SWALL:Q00730) (488 aa) fasta scores: E(): 7.6e-17, 23.7% id in 443 aa. CDS is extended at the N-terminus in comparison to orthologues; monooxygenase 2660336 3096359 BPSS1969 Burkholderia pseudomallei K96243 monooxygenase YP_111975.1 2658738 D 272560 CDS YP_111976.1 53722991 3095237 2660333..2661316 1 NC_006351.1 Similar to Pseudomonas fluorescens lactone-specific esterase EstF1 SWALL:O87637 (EMBL:AF090329) (332 aa) fasta scores: E(): 3.4e-52, 47.11% id in 312 aa, and to Rhizobium loti esterase mlr3816 SWALL:Q98FE1 (EMBL:AP003002) (355 aa) fasta scores: E(): 1.5e-21, 29.94% id in 334 aa; hypothetical protein 2661316 3095237 BPSS1970 Burkholderia pseudomallei K96243 hypothetical protein YP_111976.1 2660333 D 272560 CDS YP_111977.1 53722992 3097107 2662056..2663579 1 NC_006351.1 Similar in its full length to Ralstonia solanacearum probable transmembrane protein rsp1524 or rs04801 SWALL:Q8XPW2 (EMBL:AL646085) (505 aa) fasta scores: E(): 1.4e-75, 42.12% id in 489 aa, N-terminal region to Rhizobium loti two-component system histidine protein kinase mll4698 SWALL:Q98DH8 (EMBL:AP003004) (535 aa) fasta scores: E(): 3.6e-21, 32.24% id in 338 aa, and C-terminal region to Xanthomonas campestris response regulator xcc3729 SWALL:Q8P4H8 (EMBL:AE012493) (349 aa) fasta scores: E(): 4.1e-38, 38.46% id in 338 aa; two component system fusin protein 2663579 3097107 BPSS1971 Burkholderia pseudomallei K96243 two component system fusin protein YP_111977.1 2662056 D 272560 CDS YP_111978.1 53722993 3097108 2663739..2664188 1 NC_006351.1 hypothetical protein 2664188 3097108 BPSS1972 Burkholderia pseudomallei K96243 hypothetical protein YP_111978.1 2663739 D 272560 CDS YP_111979.1 53722994 3095105 2665124..2667058 1 NC_006351.1 Similar to Xanthomonas sp. xanthomonapepsin precursor SWALL:XANP_XANS2 (SWALL:Q60106) (827 aa) fasta scores: E(): 7.7e-91, 56.77% id in 627 aa, and to Pseudomonas sp. pseudomonapepsin precursor Pcp SWALL:PICP_PSESR (SWALL:P42790) (587 aa) fasta scores: E(): 2e-24, 48.81% id in 631 aa; sedolisin-B 2667058 3095105 BPSS1973 Burkholderia pseudomallei K96243 sedolisin-B YP_111979.1 2665124 D 272560 CDS YP_111980.1 53722995 3095106 2667859..2669577 1 NC_006351.1 C-terminal region similar to Ralstonia solanacearum hemagglutinin-related transmembrane protein rsp1094 or rs02600 SWALL:Q8XQX4 (EMBL:AL646082) (459 aa) fasta scores: E(): 8.5e-38, 41.25% id in 446 aa, and N-terminal region to Mycobacterium tuberculosis hypothetical pe-PGRS family protein precursor rv3508 or mtv023.15 SWALL:YZ08_MYCTU (SWALL:O53553) (1901 aa) fasta scores: E(): 3.7e-21, 31.42% id in 560 aa. Note: This CDS contains a repeat region between residue 44 and residue 199; lipoprotein 2669577 3095106 BPSS1974 Burkholderia pseudomallei K96243 lipoprotein YP_111980.1 2667859 D 272560 CDS YP_111981.1 53722996 3097219 2669668..2670951 1 NC_006351.1 hypothetical protein 2670951 3097219 BPSS1975 Burkholderia pseudomallei K96243 hypothetical protein YP_111981.1 2669668 D 272560 CDS YP_111982.1 53722997 3095868 2671756..2673126 1 NC_006351.1 hypothetical protein 2673126 3095868 BPSS1976 Burkholderia pseudomallei K96243 hypothetical protein YP_111982.1 2671756 D 272560 CDS YP_111983.1 53722998 3095869 2673158..2674486 1 NC_006351.1 Low similarity to Pseudomonas aeruginosa probable glycosyl hydrolase pa2237 SWALL:Q9I1N2 (EMBL:AE004649) (442 aa) fasta scores: E(): 9.6e-15, 25.65% id in 382 aa; hypothetical protein 2674486 3095869 BPSS1977 Burkholderia pseudomallei K96243 hypothetical protein YP_111983.1 2673158 D 272560 CDS YP_111984.1 53722999 3095490 2674611..2676974 1 NC_006351.1 Similar to Ralstonia solanacearum tyrosine-protein kinase EpsB SWALL:EPB2_RALSO (SWALL:Q45409) (750 aa) fasta scores: E(): 3.4e-36, 30.28% id in 733 aa, and to Escherichia coli O157:H7 tyrosine-protein kinase Etk or z1398 or ecs1137 SWALL:ETK_ECO57 (SWALL:Q8XC28) (726 aa) fasta scores: E(): 9.6e-36, 28.78% id in 747 aa; EPS transport-related membrane protein kinase 2676974 3095490 BPSS1978 Burkholderia pseudomallei K96243 EPS transport-related membrane protein kinase YP_111984.1 2674611 D 272560 CDS YP_111985.1 53723000 3095491 2677447..2678637 1 NC_006351.1 hypothetical protein 2678637 3095491 BPSS1979 Burkholderia pseudomallei K96243 hypothetical protein YP_111985.1 2677447 D 272560 CDS YP_111986.1 53723001 3096841 2678760..2679263 1 NC_006351.1 No significant database matches. Possible alternative translational start sites; hypothetical protein 2679263 3096841 BPSS1980 Burkholderia pseudomallei K96243 hypothetical protein YP_111986.1 2678760 D 272560 CDS YP_111987.1 53723002 3097169 2679546..2679821 1 NC_006351.1 Similar to Serratia marcescens hypothetical 10.1 kDa protein in bioA 5'region SWALL:YOHL_SERMA (SWALL:P55757) (91 aa) fasta scores: E(): 3.4e-14, 53.84% id in 91 aa, and to Escherichia coli, and Escherichia coli O6 hypothetical protein YaiN or b0357 or c0466 SWALL:YAIN_ECOLI (SWALL:P55756) (91 aa) fasta scores: E(): 7.1e-10, 41.75% id in 91 aa; hypothetical protein 2679821 3097169 BPSS1981 Burkholderia pseudomallei K96243 hypothetical protein YP_111987.1 2679546 D 272560 CDS YP_111988.1 53723003 3097170 2679834..2681102 1 NC_006351.1 Similar to Agrobacterium tumefaciens cation efflux system protein atu0891 or agr_c_1625 SWALL:Q8UGZ4 (EMBL:AE009054) (338 aa) fasta scores: E(): 2.4e-36, 46.6% id in 412 aa, and to the N-terminal region of Escherichia coli zinc transporter ZitB or b0752 SWALL:ZITB_ECOLI (SWALL:P75757) (313 aa) fasta scores: E(): 4.1e-15, 39.24% id in 186 aa. Note: This CDS presents no similarities in the region between residue 170 and 280; cation efflux related membrane protein 2681102 3097170 BPSS1982 Burkholderia pseudomallei K96243 cation efflux related membrane protein YP_111988.1 2679834 D 272560 CDS YP_111989.1 53723004 3096355 2681882..2682934 1 NC_006351.1 Similar to eukaryotic proteins as Sus scrofa deoxyribonuclease II precursor DNAse2 or Dnl2 SWALL:DRN2_PIG (SWALL:O62855) (364 aa) fasta scores: E(): 1.8e-26, 30.55% id in 360 aa, and to Homo sapiens deoxyribonuclease II precursor DNAse2 or Dnl2 SWALL:DRN2_HUMAN (SWALL:O00115) (360 aa) fasta scores: E(): 5e-26, 29.32% id in 324 aa; deoxyribonuclease 2682934 3096355 BPSS1983 Burkholderia pseudomallei K96243 deoxyribonuclease YP_111989.1 2681882 D 272560 CDS YP_111990.1 53723005 3096356 2683006..2685912 1 NC_006351.1 hypothetical protein 2685912 3096356 BPSS1984 Burkholderia pseudomallei K96243 hypothetical protein YP_111990.1 2683006 D 272560 CDS YP_111991.1 53723006 3096944 2685909..2686691 1 NC_006351.1 hypothetical protein 2686691 3096944 BPSS1985 Burkholderia pseudomallei K96243 hypothetical protein YP_111991.1 2685909 D 272560 CDS YP_111992.1 53723007 3095600 2686735..2687490 1 NC_006351.1 hypothetical protein 2687490 3095600 BPSS1986 Burkholderia pseudomallei K96243 hypothetical protein YP_111992.1 2686735 D 272560 CDS YP_111993.1 53723008 3095601 2687491..2689113 1 NC_006351.1 phosphesterase 2689113 3095601 BPSS1987 Burkholderia pseudomallei K96243 phosphesterase YP_111993.1 2687491 D 272560 CDS YP_111994.1 53723009 3096100 2689110..2690126 1 NC_006351.1 hypothetical protein 2690126 3096100 BPSS1988 Burkholderia pseudomallei K96243 hypothetical protein YP_111994.1 2689110 D 272560 CDS YP_111995.1 53723010 3096101 2690149..2691303 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein sco7155 or sc9a4.17 SWALL:Q9FBT7 (EMBL:AL939130) (355 aa) fasta scores: E(): 5.4e-20, 32.93% id in 334 aa, and to Anabaena sp. hypothetical protein alr1577 SWALL:Q8YWM8 (EMBL:AP003586) (366 aa) fasta scores: E(): 3.6e-07, 28.19% id in 376 aa; hypothetical protein 2691303 3096101 BPSS1989 Burkholderia pseudomallei K96243 hypothetical protein YP_111995.1 2690149 D 272560 CDS YP_111996.1 53723011 3097225 complement(2691407..2692159) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical aldolase class II protein pa3430 SWALL:YY30_PSEAE (SWALL:Q9HYH5) (259 aa) fasta scores: E(): 3.6e-60, 62.34% id in 247 aa, and to parts of Homo sapiens alpha adducin Add1 or AddA SWALL:ADDA_HUMAN (SWALL:P35611) (737 aa) fasta scores: E(): 3.3e-32, 41.03% id in 251 aa; aldolase 2692159 3097225 BPSS1990 Burkholderia pseudomallei K96243 aldolase YP_111996.1 2691407 R 272560 CDS YP_111997.1 53723012 3096962 2692430..2693104 1 NC_006351.1 Similar to Vibrio cholerae hypothetical protein vc0266 SWALL:Q9KV90 (EMBL:AE004115) (190 aa) fasta scores: E(): 3.8e-47, 61.9% id in 189 aa, and to Ralstonia solanacearum hypothetical protein rsc1329 or rs02851 SWALL:Q8XZR6 (EMBL:AL646064) (198 aa) fasta scores: E(): 1.2e-37, 53.4% id in 191 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; hypothetical protein 2693104 3096962 BPSS1991 Burkholderia pseudomallei K96243 hypothetical protein YP_111997.1 2692430 D 272560 CDS YP_111998.1 53723013 3096963 complement(2693248..2695182) 1 NC_006351.1 catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase 2695182 3096963 BPSS1992 Burkholderia pseudomallei K96243 x-prolyl-dipeptidyl aminopeptidase YP_111998.1 2693248 R 272560 CDS YP_111999.1 53723014 3095199 complement(2695482..2696984) 1 NC_006351.1 Previously sequenced as Burkholderia pseudomallei serine metalloprotease precursor SWALL:Q9F881 (EMBL:AF254803) (500 aa) fasta scores: E(): 7.7e-170, 100% id in 500 aa. Similar to Xanthomonas campestris extracellular protease precursor xcc0851 SWALL:EXPR_XANCP (SWALL:P23314) (580 aa) fasta scores: E(): 4.5e-65, 49.02% id in 463 aa; serine metalloprotease precursor 2696984 mprA 3095199 mprA Burkholderia pseudomallei K96243 serine metalloprotease precursor YP_111999.1 2695482 R 272560 CDS YP_112000.1 53723015 3094905 2698676..2699368 1 NC_006351.1 Similar to Burkholderia pseudomallei transcriptional activator protein IrlR SWALL:IRLR_BURPS (SWALL:O31395) (229 aa) fasta scores: E(): 2.6e-70, 73.24% id in 228 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 transcriptional regulatory protein CusR or b0571 or c0657 or z0709 or ecs0609 SWALL:CUSR_ECOLI (SWALL:P77380) (227 aa) fasta scores: E(): 1.1e-52, 60.81% id in 222 aa; metal-related two-component system, response regulator 2699368 irlR2 3094905 irlR2 Burkholderia pseudomallei K96243 metal-related two-component system, response regulator YP_112000.1 2698676 D 272560 CDS YP_112001.1 53723016 3095021 2699365..2700819 1 NC_006351.1 Similar to Burkholderia pseudomallei sensor protein IrlS SWALL:IRLS_BURPS (SWALL:O31396) (464 aa) fasta scores: E(): 6.3e-81, 49.78% id in 468 aa, and to Escherichia coli sensor kinase CusS or b0570 SWALL:CUSS_ECOLI (SWALL:P77485) (480 aa) fasta scores: E(): 8.6e-38, 33.94% id in 436 aa; metal-related two-component system, histidine kinase 2700819 irlS2 3095021 irlS2 Burkholderia pseudomallei K96243 metal-related two-component system, histidine kinase YP_112001.1 2699365 D 272560 CDS YP_112002.1 53723017 3096940 2700919..2701311 1 NC_006351.1 hypothetical protein 2701311 3096940 BPSS1996 Burkholderia pseudomallei K96243 hypothetical protein YP_112002.1 2700919 D 272560 CDS YP_112003.1 53723018 3095413 complement(2701464..2702273) 1 NC_006351.1 Almost identical to the previously sequenced Burkholderia pseudomallei beta-lactamase precursor Oxa SWALL:CAD32565 (EMBL:AJ488303) (269 aa) fasta scores: E(): 2.2e-111, 99.62% id in 269 aa. Similar to Pseudomonas aeruginosa beta-lactamase Oxa-18 precursor SWALL:BLOI_PSEAE (SWALL:O07293) (275 aa) fasta scores: E(): 2.4e-37, 43.07% id in 267 aa; beta-lactamase precursor 2702273 oxa 3095413 oxa Burkholderia pseudomallei K96243 beta-lactamase precursor YP_112003.1 2701464 R 272560 CDS YP_112004.1 53723019 3096941 complement(2702920..2705784) 1 NC_006351.1 Similar to Anabaena sp. hypothetical protein alr1386 SWALL:Q8YX32 (EMBL:AP003585) (1001 aa) fasta scores: E(): 2.5e-60, 41.34% id in 1028 aa, and low similarity to Methanosarcina mazei ORF492 SWALL:Q50245 (EMBL:X84710) (491 aa) fasta scores: E(): 0.00018, 24.58% id in 301 aa; lipoprotein 2705784 3096941 BPSS1998 Burkholderia pseudomallei K96243 lipoprotein YP_112004.1 2702920 R 272560 CDS YP_112005.1 53723020 3095035 complement(2706195..2707031) 1 NC_006351.1 Similar to Rickettsia prowazekii hypothetical protein rp393 SWALL:Q9ZDD8 (EMBL:AJ235271) (282 aa) fasta scores: E(): 2.1e-27, 34.1% id in 258 aa, and to Brucella melitensis high-affinity iron permease bmeii0883 SWALL:Q8YBL6 (EMBL:AE009722) (278 aa) fasta scores: E(): 2.9e-16, 30.03% id in 273 aa; transport related, membrane protein 2707031 3095035 BPSS1999 Burkholderia pseudomallei K96243 transport related, membrane protein YP_112005.1 2706195 R 272560 CDS YP_112006.1 53723021 3096442 complement(2707045..2707386) 1 NC_006351.1 Similar to Rickettsia prowazekii hypothetical protein rp394 SWALL:Y394_RICPR (SWALL:Q9ZDD7) (125 aa) fasta scores: E(): 2e-06, 33.33% id in 81 aa, and to Brucella melitensis hypothetical protein bmeii0884 SWALL:Q8YBL5 (EMBL:AE009722) (124 aa) fasta scores: E(): 9e-06, 31.63% id in 98 aa; hypothetical protein 2707386 3096442 BPSS2000 Burkholderia pseudomallei K96243 hypothetical protein YP_112006.1 2707045 R 272560 CDS YP_112007.1 53723022 3096443 complement(2708347..2708595) 1 NC_006351.1 hypothetical protein 2708595 3096443 BPSS2001 Burkholderia pseudomallei K96243 hypothetical protein YP_112007.1 2708347 R 272560 CDS YP_112008.1 53723023 3095183 2710129..2710617 1 NC_006351.1 Similar to Pasteurella multocida hypothetical protein Pm1939 SWALL:Q9CJQ5 (EMBL:AE006230) (151 aa) fasta scores: E(): 6.5e-26, 50% id in 142 aa; periplasmic protein 2710617 3095183 BPSS2003 Burkholderia pseudomallei K96243 periplasmic protein YP_112008.1 2710129 D 272560 CDS YP_112009.1 53723024 3096435 complement(2711269..2711580) 1 NC_006351.1 Similar to Ralstonia solanacearum ISRso16-transposase OrfA protein Rsp0557 or Rs03922 SWALL:Q8XSC1 (EMBL:AL646079) (88 aa) fasta scores: E(): 1.1e-16, 67.07% id in 82 aa, and to Xanthomonas campestris truncated transposase tnP SWALL:Q8RJP9 (EMBL:U33548) (88 aa) fasta scores: E(): 1.1e-14, 62.19% id in 82 aa; transposase 2711580 3096435 BPSS2005 Burkholderia pseudomallei K96243 transposase YP_112009.1 2711269 R 272560 CDS YP_112010.1 53723025 3096436 complement(2711640..2711780) 1 NC_006351.1 hypothetical protein 2711780 3096436 BPSS2006 Burkholderia pseudomallei K96243 hypothetical protein YP_112010.1 2711640 R 272560 CDS YP_112011.1 53723026 3095801 complement(2711792..2712958) 1 NC_006351.1 Similar to Ralstonia solanacearum transmembrane protein Rsc1400 or Rs05292 SWALL:Q8XZJ5 (EMBL:AL646064) (375 aa) fasta scores: E(): 4e-36, 36.54% id in 353 aa; hypothetical protein 2712958 3095801 BPSS2007 Burkholderia pseudomallei K96243 hypothetical protein YP_112011.1 2711792 R 272560 CDS YP_112012.1 53723027 3095222 complement(2714171..2715988) 1 NC_006351.1 Similar to Escherichia coli glucosamine--fructose-6-phosphate aminotransferase [isomerizing] GlmS or b3729 SWALL:GLMS_ECOLI (SWALL:P17169) (608 aa) fasta scores: E(): 6.3e-116, 52.86% id in 611 aa; glucosamine--fructose-6-phosphate aminotransferase 2715988 glmS3 3095222 glmS3 Burkholderia pseudomallei K96243 glucosamine--fructose-6-phosphate aminotransferase YP_112012.1 2714171 R 272560 CDS YP_112013.1 53723028 3095979 complement(2715995..2717116) 1 NC_006351.1 hypothetical protein 2717116 3095979 BPSS2010 Burkholderia pseudomallei K96243 hypothetical protein YP_112013.1 2715995 R 272560 CDS YP_112014.1 53723029 3095774 complement(2717209..2719323) 1 NC_006351.1 hypothetical protein 2719323 3095774 BPSS2011 Burkholderia pseudomallei K96243 hypothetical protein YP_112014.1 2717209 R 272560 CDS YP_112015.1 53723030 3095775 complement(2719653..2720468) 1 NC_006351.1 hypothetical protein 2720468 3095775 BPSS2012 Burkholderia pseudomallei K96243 hypothetical protein YP_112015.1 2719653 R 272560 CDS YP_112016.1 53723031 3095363 complement(2720481..2721737) 1 NC_006351.1 hypothetical protein 2721737 3095363 BPSS2013 Burkholderia pseudomallei K96243 hypothetical protein YP_112016.1 2720481 R 272560 CDS YP_112017.1 53723032 3096651 complement(2721751..2722743) 1 NC_006351.1 No significant database matches. Possible alternative translational start sites; hypothetical protein 2722743 3096651 BPSS2014 Burkholderia pseudomallei K96243 hypothetical protein YP_112017.1 2721751 R 272560 CDS YP_112018.1 53723033 3096652 complement(2722747..2724309) 1 NC_006351.1 Similar to Listeria monocytogenes hypothetical protein Lmo0529 SWALL:Q8Y9J8 (EMBL:AL591975) (416 aa) fasta scores: E(): 4.9e-28, 29.22% id in 414 aa, and to Leptospira interrogans glycosyl transferase La0627 SWALL:AAN47826 (EMBL:AE011249) (516 aa) fasta scores: E(): 1.3e-22, 28.13% id in 391 aa. CDS is extended at the N-terminus in comparison to similar proteins; inner membrane glycosyltransferase 2724309 3096652 BPSS2015 Burkholderia pseudomallei K96243 inner membrane glycosyltransferase YP_112018.1 2722747 R 272560 CDS YP_112019.1 53723034 3096547 2725574..2726788 1 NC_006351.1 Similar to Escherichia coli UDP-N-acetylglucosamine 2-epimerase WecB or RffE or NfrC or b3786 SWALL:WECB_ECOLI (SWALL:P27828) (376 aa) fasta scores: E(): 1.3e-81, 57.83% id in 370 aa; UDP-N-acetylglucosamine 2-epimerase 2726788 wecB 3096547 wecB Burkholderia pseudomallei K96243 UDP-N-acetylglucosamine 2-epimerase YP_112019.1 2725574 D 272560 CDS YP_112020.1 53723035 3097041 complement(2728076..2728954) 1 NC_006351.1 Similar to Vibrio cholerae transcriptional activator protein NhaR or HlyT or Vc0677 SWALL:NHAR_VIBCH (SWALL:P52692) (296 aa) fasta scores: E(): 3.7e-23, 31.72% id in 290 aa, and to Escherichia coli transcriptional activator protein nhar nhar or anto or b0020 SWALL:NHAR_ECOLI (SWALL:P10087) (301 aa) fasta scores: E(): 1.8e-22, 31.46% id in 286 aa; LysR family transcriptional regulator 2728954 3097041 BPSS2017 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_112020.1 2728076 R 272560 CDS YP_112021.1 53723036 3097042 2729087..2729848 1 NC_006351.1 Similar to Agrobacterium tumefaciens hypothetical protein Atu4476 or Agr_l_786 SWALL:Q8U7H3 (EMBL:AE009376) (275 aa) fasta scores: E(): 1e-63, 66.13% id in 251 aa, and to Escherichia coli hypothetical protein YoaE or b1816 or c2222 or z2859 or ecs2525 SWALL:YOAE_ECOLI (SWALL:P76262) (518 aa) fasta scores: E(): 1.1e-48, 50.61% id in 243 aa; hypothetical protein 2729848 3097042 BPSS2018 Burkholderia pseudomallei K96243 hypothetical protein YP_112021.1 2729087 D 272560 CDS YP_112022.1 53723037 3097021 2729992..2730315 1 NC_006351.1 Similar to Caulobacter crescentus hypothetical protein Cc2510 SWALL:Q9A5E0 (EMBL:AE005919) (106 aa) fasta scores: E(): 1.2e-09, 38.73% id in 111 aa; hypothetical protein 2730315 3097021 BPSS2019 Burkholderia pseudomallei K96243 hypothetical protein YP_112022.1 2729992 D 272560 CDS YP_112023.1 53723038 3096331 2730550..2730978 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein Mll0824 SWALL:Q98LY2 (EMBL:AP002995) (138 aa) fasta scores: E(): 3.4e-06, 29.1% id in 134 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4177 SWALL:Q9HWK4 (EMBL:AE004834) (133 aa) fasta scores: E(): 4.4e-06, 37.36% id in 91 aa; hypothetical protein 2730978 3096331 BPSS2020 Burkholderia pseudomallei K96243 hypothetical protein YP_112023.1 2730550 D 272560 CDS YP_112024.1 53723039 3096332 complement(2731210..2732691) 1 NC_006351.1 Similar to Mus musculus sphingosine-1-phosphate lyase Sgpl1 SWALL:O54955 (EMBL:AF036894) (568 aa) fasta scores: E(): 6.1e-52, 37.34% id in 482 aa; decarboxylase 2732691 3096332 BPSS2021 Burkholderia pseudomallei K96243 decarboxylase YP_112024.1 2731210 R 272560 CDS YP_112025.1 53723040 3097275 2732831..2733736 1 NC_006351.1 No significant database matches. Possible alternative translation start sites; outer membrane protein 2733736 3097275 BPSS2022 Burkholderia pseudomallei K96243 outer membrane protein YP_112025.1 2732831 D 272560 CDS YP_112026.1 53723041 3097276 2734100..2734363 1 NC_006351.1 hypothetical protein 2734363 3097276 BPSS2023 Burkholderia pseudomallei K96243 hypothetical protein YP_112026.1 2734100 D 272560 CDS YP_112027.1 53723042 3095042 complement(2734375..2735583) 1 NC_006351.1 Similar to Anabaena sp. alcohol dehydrogenase All5334 SWALL:Q8YLG4 (EMBL:AP003599) (409 aa) fasta scores: E(): 3.1e-102, 65.42% id in 402 aa, and to Methylobacter marinus glutathione-dependent formaldehyde dehydrogenase Fdh SWALL:FADH_METMR (SWALL:P47734) (424 aa) fasta scores: E(): 5.2e-43, 44.41% id in 412 aa; zinc-containing alcohol dehydrogenase 2735583 3095042 BPSS2024 Burkholderia pseudomallei K96243 zinc-containing alcohol dehydrogenase YP_112027.1 2734375 R 272560 CDS YP_112028.1 53723043 3095612 complement(2736052..2737575) 1 NC_006351.1 Similar to Mus musculus sphingosine-1-phosphate lyase Sgpl1 SWALL:O54955 (EMBL:AF036894) (568 aa) fasta scores: E(): 6e-48, 37.71% id in 456 aa; decarboxylase 2737575 3095612 BPSS2025 Burkholderia pseudomallei K96243 decarboxylase YP_112028.1 2736052 R 272560 CDS YP_112029.1 53723044 3095613 complement(2737851..2739464) 1 NC_006351.1 Similar to Xanthomonas axonopodis xylulose kinase XylB or Xac4244 SWALL:AAM39079 (EMBL:AE012077) (532 aa) fasta scores: E(): 3.9e-60, 37.87% id in 536 aa, and to Brucella abortus erythritol kinase EryA SWALL:Q9ZB32 (EMBL:U57100) (519 aa) fasta scores: E(): 7.1e-19, 26.77% id in 534 aa; carbohydrate kinase 2739464 3095613 BPSS2026 Burkholderia pseudomallei K96243 carbohydrate kinase YP_112029.1 2737851 R 272560 CDS YP_112030.1 53723045 3096657 complement(2740058..2740432) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa3178 SWALL:Q9HZ56 (EMBL:AE004742) (125 aa) fasta scores: E(): 2.3e-16, 48.27% id in 116 aa; hypothetical protein 2740432 3096657 BPSS2027 Burkholderia pseudomallei K96243 hypothetical protein YP_112030.1 2740058 R 272560 CDS YP_112031.1 53723046 3096658 complement(2740651..2741325) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa2885 SWALL:Q9HZW2 (EMBL:AE004714) (198 aa) fasta scores: E(): 1.6e-22, 40.21% id in 189 aa, and to Neisseria gonorrhoeae regulatory protein MtrR SWALL:MTRR_NEIGO (SWALL:P39897) (210 aa) fasta scores: E(): 0.0013, 28.77% id in 139 aa; TetR family transcriptional regulator 2741325 3096658 BPSS2028 Burkholderia pseudomallei K96243 TetR family transcriptional regulator YP_112031.1 2740651 R 272560 CDS YP_112032.1 53723047 3095659 complement(2741521..2742693) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa1535 SWALL:Q9I3H8 (EMBL:AE004582) (382 aa) fasta scores: E(): 1e-70, 50% id in 380 aa, and to Rattus norvegicus acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor AcaDL SWALL:ACDL_RAT (SWALL:P15650) (430 aa) fasta scores: E(): 4.8e-43, 37.63% id in 380 aa; acyl-CoA dehydrogenase 2742693 3095659 BPSS2029 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_112032.1 2741521 R 272560 CDS YP_112033.1 53723048 3095664 2743020..2743880 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase Pa2887 SWALL:Q9HZW0 (EMBL:AE004715) (292 aa) fasta scores: E(): 1.1e-58, 57.58% id in 290 aa, and to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SWALL:GNO_GLUOX (SWALL:P50199) (256 aa) fasta scores: E(): 4.9e-21, 36.99% id in 246 aa; short-chain dehydrogenase 2743880 3095664 BPSS2030 Burkholderia pseudomallei K96243 short-chain dehydrogenase YP_112033.1 2743020 D 272560 CDS YP_112034.1 53723049 3095665 2743882..2745498 1 NC_006351.1 Similar to Myxococcus xanthus acetyl-CoA carboxylase carboxyltransferase AccB SWALL:Q9FAF6 (EMBL:AB039884) (538 aa) fasta scores: E(): 1.1e-112, 56.48% id in 540 aa; acetyl-CoA carboxylase carboxyltransferase 2745498 3095665 BPSS2031 Burkholderia pseudomallei K96243 acetyl-CoA carboxylase carboxyltransferase YP_112034.1 2743882 D 272560 CDS YP_112035.1 53723050 3097245 2745511..2746662 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase Pa2889 SWALL:Q9HZV8 (EMBL:AE004715) (386 aa) fasta scores: E(): 1e-104, 65.87% id in 381 aa, and to Rattus norvegicus acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor AcaDL SWALL:ACDL_RAT (SWALL:P15650) (430 aa) fasta scores: E(): 3.2e-43, 35.88% id in 379 aa; acyl-CoA dehydrogenase 2746662 3097245 BPSS2032 Burkholderia pseudomallei K96243 acyl-CoA dehydrogenase YP_112035.1 2745511 D 272560 CDS YP_112036.1 53723051 3097246 2746669..2747511 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable enoyl-CoA hydratase/isomerase Pa2890 SWALL:Q9HZV7 (EMBL:AE004715) (264 aa) fasta scores: E(): 4.4e-26, 44.09% id in 254 aa, and to Escherichia coli probable enoyl-CoA hydratase PaaG or b1394 SWALL:PAAG_ECOLI (SWALL:P77467) (262 aa) fasta scores: E(): 5.9e-15, 34.48% id in 261 aa; enoyl-CoA hydratase 2747511 3097246 BPSS2033 Burkholderia pseudomallei K96243 enoyl-CoA hydratase YP_112036.1 2746669 D 272560 CDS YP_112037.1 53723052 3096222 2747508..2749520 1 NC_006351.1 Similar to Mycobacterium tuberculosis acetyl-/propionyl-coenzyme A carboxylase alpha chain [includes: biotin carboxylase (EC 6.3.4.14); biotin carboxyl carrier protein (BccP)] protein AccA1 or BccA or Rv2501c or mt2576 or mtcy07a7.07C SWALL:BCCA_MYCTU (SWALL:P46401) (654 aa) fasta scores: E(): 2.6e-90, 45.97% id in 670 aa; acetyl-/propionyl-coenzyme A carboxylase subunit alpha 2749520 3096222 BPSS2034 Burkholderia pseudomallei K96243 acetyl-/propionyl-coenzyme A carboxylase subunit alpha YP_112037.1 2747508 D 272560 CDS YP_112038.1 53723053 3096952 2749555..2750439 1 NC_006351.1 Similar to many eg. Streptomyces coelicolor hypothetical protein SCO6298 or SCBAC8D1.11c SWALL:Q93RX4 (EMBL:AL939127) (308 aa) fasta scores: E(): 4.2e-17, 33.65% id in 315 aa; hypothetical protein 2750439 3096952 BPSS2035 Burkholderia pseudomallei K96243 hypothetical protein YP_112038.1 2749555 D 272560 CDS YP_112039.1 53723054 3096953 2750802..2752463 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable AMP-binding enzyme Pa1617 SWALL:Q9I3A5 (EMBL:AE004589) (555 aa) fasta scores: E(): 3.1e-73, 48.55% id in 554 aa, and to Rhizobium leguminosarum malonyl CoA synthetase MatB SWALL:Q9ZIP5 (EMBL:AF117694) (504 aa) fasta scores: E(): 1.9e-16, 27.11% id in 472 aa; AMP-binding acetyl-CoA synthetase 2752463 3096953 BPSS2036 Burkholderia pseudomallei K96243 AMP-binding acetyl-CoA synthetase YP_112039.1 2750802 D 272560 CDS YP_112040.1 53723055 3096932 2753572..2754483 1 NC_006351.1 Similar to Streptomyces coelicolor fatty acid desaturase SCO3128 or SCE66.07 SWALL:Q9K3T6 (EMBL:AL939115) (336 aa) fasta scores: E(): 4.2e-43, 40.98% id in 283 aa, and to Saccharomyces cerevisiae acyl-CoA desaturase 1 Ole1 or ygl055W SWALL:ACO1_YEAST (SWALL:P21147) (510 aa) fasta scores: E(): 5.7e-14, 27.83% id in 291 aa. Also similar to neighbouring CDS BPSS2040 (49.135% identity (50.000% ungapped) in 289 aa overlap).; inner membrane fatty acid desaturase 2754483 3096932 BPSS2037 Burkholderia pseudomallei K96243 inner membrane fatty acid desaturase YP_112040.1 2753572 D 272560 CDS YP_112041.1 53723056 3096933 2754509..2754793 1 NC_006351.1 Similar to Anabaena sp. polyketide synthase HetM or Alr5357 SWALL:HETM_ANASP (SWALL:P37693) (506 aa) fasta scores: E(): 2.5e-06, 48% id in 75 aa, and to Stigmatella aurantiaca MxaF SWALL:Q93TW6 (EMBL:AF319998) (2368 aa) fasta scores: E(): 0.00056, 40.9% id in 66 aa; polyketide synthase 2754793 3096933 BPSS2038 Burkholderia pseudomallei K96243 polyketide synthase YP_112041.1 2754509 D 272560 CDS YP_112042.1 53723057 3095337 2754806..2755741 1 NC_006351.1 Similar to Ralstonia solanacearum cyclopropane-mycolic acid synthase Rsp1657 or Rs02216 SWALL:Q8XPI3 (EMBL:AL646086) (290 aa) fasta scores: E(): 8e-24, 33.68% id in 282 aa, and to Mycobacterium tuberculosis cyclopropane-fatty-acyl-phospholipid synthase 1 CmaA1 or Cma1 or Rv3392c or mt3499 or mtv004.50 SWALL:CFA1_MYCTU (SWALL:Q11195) (287 aa) fasta scores: E(): 8.1e-20, 31.33% id in 300 aa; cyclopropane-fatty-acyl-phospholipid synthase 2755741 3095337 BPSS2039 Burkholderia pseudomallei K96243 cyclopropane-fatty-acyl-phospholipid synthase YP_112042.1 2754806 D 272560 CDS YP_112043.1 53723058 3095152 2755738..2756778 1 NC_006351.1 Similar to Ralstonia solanacearum fatty acid desaturase transmembrane protein Rsp0792 or Rs01915 SWALL:Q8XRN9 (EMBL:AL646080) (301 aa) fasta scores: E(): 1.3e-38, 44.64% id in 271 aa, and to Synechococcus sp. delta-9 desaturase DesC SWALL:O07873 (EMBL:U36390) (277 aa) fasta scores: E(): 2e-11, 31.74% id in 252 aa. Also similar to neighbouring CDS BPSS2037 (49.135% identity (50.000% ungapped) in 289 aa overlap).; inner membrane fatty acid desaturase 2756778 3095152 BPSS2040 Burkholderia pseudomallei K96243 inner membrane fatty acid desaturase YP_112043.1 2755738 D 272560 CDS YP_112044.1 53723059 3095153 2756819..2757844 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein SCO4016 or 2SC10A7.20 SWALL:Q9ADP0 (EMBL:AL939118) (317 aa) fasta scores: E(): 0.00057, 28.57% id in 329 aa; hypothetical protein 2757844 3095153 BPSS2041 Burkholderia pseudomallei K96243 hypothetical protein YP_112044.1 2756819 D 272560 CDS YP_112045.1 53723060 3095498 2757841..2759694 1 NC_006351.1 Similar to Myxococcus xanthus saframycin MX1 synthetase B SafB SWALL:Q50857 (EMBL:U24657) (1770 aa) fasta scores: E(): 3.3e-77, 44.21% id in 588 aa, and to Streptomyces coelicolor polyketide synthase SCO5892 or SC3F7.12 SWALL:O54155 (EMBL:AL939125) (2297 aa) fasta scores: E(): 5.2e-47, 43.28% id in 603 aa, and to Mycobacterium tuberculosis fatty-acid--CoA ligase FadD26 or Rv2930 or mt2999 or mtcy338.19 SWALL:FD26_MYCTU (SWALL:Q10976) (583 aa) fasta scores: E(): 2.1e-33, 34.11% id in 595 aa; inner membrane fatty-acid--CoA ligase 2759694 3095498 BPSS2042 Burkholderia pseudomallei K96243 inner membrane fatty-acid--CoA ligase YP_112045.1 2757841 D 272560 CDS YP_112046.1 53723061 3095499 2759708..2760127 1 NC_006351.1 Similar to Deinococcus radiodurans ComA-related protein Dr0847 SWALL:Q9RW22 (EMBL:AE001939) (119 aa) fasta scores: E(): 9.3e-23, 50.84% id in 118 aa, and to Bacillus subtilis ComA operon protein 2 YuxO or ComAB or ComA2 SWALL:CMA2_BACSU (SWALL:P14205) (126 aa) fasta scores: E(): 0.00047, 26.08% id in 115 aa; hypothetical protein 2760127 3095499 BPSS2043 Burkholderia pseudomallei K96243 hypothetical protein YP_112046.1 2759708 D 272560 CDS YP_112047.1 53723062 3095985 2760200..2761105 1 NC_006351.1 Similar to Ralstonia solanacearum hydrolase RS04279 SWALL:Q8XYB7 (EMBL:AL646067) (295 aa) fasta scores: E(): 2.3e-24, 34.26% id in 286 aa, and to the C-terminal region of Caulobacter crescentus hypothetical protein CC2565 SWALL:Q9A592 (EMBL:AE005925) (475 aa) fasta scores: E(): 2.3e-25, 34.43% id in 302 aa; hypothetical protein 2761105 3095985 BPSS2044 Burkholderia pseudomallei K96243 hypothetical protein YP_112047.1 2760200 D 272560 CDS YP_112048.1 53723063 3095695 2761576..2762172 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein Xac2731 SWALL:AAM37576 (EMBL:AE011912) (206 aa) fasta scores: E(): 1.7e-60, 78.42% id in 190 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 2762172 3095695 BPSS2045 Burkholderia pseudomallei K96243 hypothetical protein YP_112048.1 2761576 D 272560 CDS YP_112049.1 53723064 3095696 2762409..2763137 1 NC_006351.1 Similar to Rhizobium hedysari transposase SWALL:O30982 (EMBL:AF023675) (250 aa) fasta scores: E(): 3.9e-32, 44.29% id in 228 aa, and to Pantoea agglomerans IS1327 containing a transposase TnpA SWALL:P94785 (EMBL:X87144) (234 aa) fasta scores: E(): 8.6e-23, 33.33% id in 228 aa; IS element transposase 2763137 3095696 BPSS2046 Burkholderia pseudomallei K96243 IS element transposase YP_112049.1 2762409 D 272560 CDS YP_112050.1 53723065 3096176 2763357..2764790 1 NC_006351.1 Similar to Streptomyces coelicolor hydrolase SCO1984 or SC3C9.19c SWALL:Q93JH8 (EMBL:AL939111) (465 aa) fasta scores: E(): 6.7e-32, 32.52% id in 452 aa, and to Rhodococcus corallinus s-triazine hydrolase TrzA SWALL:TRZA_RHOCO (SWALL:Q52725) (476 aa) fasta scores: E(): 2e-17, 27.97% id in 454 aa; chrolohydrolase 2764790 3096176 BPSS2047 Burkholderia pseudomallei K96243 chrolohydrolase YP_112050.1 2763357 D 272560 CDS YP_112051.1 53723066 3096177 2764816..2765469 1 NC_006351.1 Similar to Caulobacter crescentus glutathione S-transferase Cc2647 SWALL:Q9A522 (EMBL:AE005932) (215 aa) fasta scores: E(): 6.4e-51, 57.94% id in 214 aa, and to Zea mays glutathione S-transferase III Gst3 SWALL:GTH3_MAIZE (SWALL:P04907) (221 aa) fasta scores: E(): 8e-11, 29.66% id in 209 aa; glutathione S-transferase 2765469 3096177 BPSS2048 Burkholderia pseudomallei K96243 glutathione S-transferase YP_112051.1 2764816 D 272560 CDS YP_112052.1 53723067 3096343 complement(2765650..2766378) 1 NC_006351.1 Similar to Rhizobium hedysari transposase SWALL:O30982 (EMBL:AF023675) (250 aa) fasta scores: E(): 7.8e-32, 44.29% id in 228 aa, and to Pantoea agglomerans IS1327 containing a transposase TnpA SWALL:P94785 (EMBL:X87144) (234 aa) fasta scores: E(): 5e-22, 32.89% id in 228 aa; IS element transposase 2766378 3096343 BPSS2049 Burkholderia pseudomallei K96243 IS element transposase YP_112052.1 2765650 R 272560 CDS YP_112053.1 53723068 3095619 complement(2767010..2768149) 1 NC_006351.1 Similar to Ralstonia solanacearum transposase Rsc3179 or Rs06078 SWALL:Q8XUK9 (EMBL:AL646074) (363 aa) fasta scores: E(): 5.9e-48, 41.71% id in 338 aa; DNA-binding protein 2768149 3095619 BPSS2051 Burkholderia pseudomallei K96243 DNA-binding protein YP_112053.1 2767010 R 272560 CDS YP_112054.1 53723069 3096990 complement(2768149..2769918) 1 NC_006351.1 Similar to Ralstonia solanacearum probable activation/secretion signal peptide protein Rsp0550 or Rs06123 SWALL:Q8XSC8 (EMBL:AL646079) (590 aa) fasta scores: E(): 9.6e-145, 62.7% id in 563 aa, and to Proteus mirabilis hemolysin activator protein precursor HpmB SWALL:HLYB_PROMI (SWALL:P16465) (561 aa) fasta scores: E(): 9.1e-28, 28.64% id in 412 aa, and to Serratia marcescens hemolysin activator protein precursor ShlB SWALL:HLYB_SERMA (SWALL:P15321) (557 aa) fasta scores: E(): 1.6e-25, 26.07% id in 510 aa. Possible alternative translational start sites; activator/secretion protein 2769918 3096990 BPSS2052 Burkholderia pseudomallei K96243 activator/secretion protein YP_112054.1 2768149 R 272560 CDS YP_112055.1 53723070 3096991 complement(2770766..2780077) 1 NC_006351.1 Similar to Ralstonia solanacearum probable hemagglutinin-related protein Rsc1775 or Rs04371 SWALL:Q8XYI3 (EMBL:AL646066) (3165 aa) fasta scores: E(): 3.8e-164, 33.54% id in 3258 aa, and to Yersinia pestis adhesin Ypo0599 or y3579 SWALL:Q8ZIA8 (EMBL:AJ414143) (3295 aa) fasta scores: E(): 3.1e-62, 30.38% id in 3383 aa; cell surface protein 2780077 3096991 BPSS2053 Burkholderia pseudomallei K96243 cell surface protein YP_112055.1 2770766 R 272560 CDS YP_112056.1 53723071 3096084 complement(2781283..2785914) 1 NC_006351.1 similar to Rhs-family proteins eg. Yersinia pestis hypothetical protein Ypo0762 SWALL:Q8ZHW7 (EMBL:AJ414144) (1438 aa) fasta scores: E(): 9e-190, 43.08% id in 1460 aa, and to Escherichia coli RhsB protein precursor or b3482 SWALL:RHSB_ECOLI (SWALL:P16917) (1411 aa) fasta scores: E(): 3.1e-34, 27.48% id in 1317 aa. Possibly membrane associated.; hypothetical protein 2785914 3096084 BPSS2054 Burkholderia pseudomallei K96243 hypothetical protein YP_112056.1 2781283 R 272560 CDS YP_112057.1 53723072 3096085 complement(2785928..2787196) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein Ypo0763 SWALL:Q8ZHW6 (EMBL:AJ414144) (439 aa) fasta scores: E(): 1.6e-69, 43.99% id in 416 aa; hypothetical protein 2787196 3096085 BPSS2055 Burkholderia pseudomallei K96243 hypothetical protein YP_112057.1 2785928 R 272560 CDS YP_112058.1 53723073 3095178 complement(2787212..2789416) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 2.4e-105, 41.24% id in 725 aa, and to Yersinia pestis hypothetical protein Ypo0764 or y3430 SWALL:Q8ZHW5 (EMBL:AJ414144) (741 aa) fasta scores: E(): 5.3e-62, 33.28% id in 706 aa; hypothetical protein 2789416 3095178 BPSS2056 Burkholderia pseudomallei K96243 hypothetical protein YP_112058.1 2787212 R 272560 CDS YP_112059.1 53723074 3095705 complement(2790628..2791848) 1 NC_006351.1 Similar to Burkholderia mallei transposase Tnp SWALL:Q9FDC1 (EMBL:AF285635) (386 aa) fasta scores: E(): 3.7e-163, 99.48% id in 386 aa, and to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 2e-138, 78.32% id in 406 aa; IS element transposase 2791848 3095705 BPSS2057 Burkholderia pseudomallei K96243 IS element transposase YP_112059.1 2790628 R 272560 CDS YP_112060.1 53723075 3095706 complement(2792731..2793330) 1 NC_006351.1 May be truncated due to insertion of downstream IS element. Similar to the N-terminal portion of many transporters eg. Ralstonia solanacearum glutamate symport transmembrane protein rsc1957 or rs03531 SWALL:Q8XY06 (EMBL:AL646067) (428 aa) fasta scores: E(): 1.5e-23, 50.75% id in 132 aa, and to Escherichia coli proton glutamate symport protein gltp or b4077 SWALL:GLTP_ECOLI (SWALL:P21345) (437 aa) fasta scores: E(): 2.4e-09, 36.6% id in 112 aa; ATP-binding inner membrane transport protein 2793330 3095706 BPSS2058 Burkholderia pseudomallei K96243 ATP-binding inner membrane transport protein YP_112060.1 2792731 R 272560 CDS YP_112061.1 53723076 3097110 complement(2793355..2793765) 1 NC_006351.1 Similar to many eg. Ralstonia solanacearum hypothetical protein Rsp1515 or Rs04792 SWALL:Q8XPX1 (EMBL:AL646085) (130 aa) fasta scores: E(): 6.7e-26, 61.98% id in 121 aa; hypothetical protein 2793765 3097110 BPSS2059 Burkholderia pseudomallei K96243 hypothetical protein YP_112061.1 2793355 R 272560 CDS YP_112062.1 53723077 3095666 complement(2793880..2794935) 1 NC_006351.1 Similar to Wolinella succinogenes L-asparaginase AnsA SWALL:ASPG_WOLSU (SWALL:P50286) (330 aa) fasta scores: E(): 1.2e-51, 48.32% id in 329 aa, and to Escherichia coli L-asparaginase II precursor AnsB or b2957 SWALL:ASG2_ECOLI (SWALL:P00805) (348 aa) fasta scores: E(): 1.5e-46, 47.23% id in 326 aa; L-asparaginase 2794935 ansA 3095666 ansA Burkholderia pseudomallei K96243 L-asparaginase YP_112062.1 2793880 R 272560 CDS YP_112063.1 53723078 3097111 2795170..2795802 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein Rsp1517 or Rs04794 SWALL:Q8XPW9 (EMBL:AL646085) (214 aa) fasta scores: E(): 1.5e-34, 53.17% id in 205 aa; hypothetical protein 2795802 3097111 BPSS2061 Burkholderia pseudomallei K96243 hypothetical protein YP_112063.1 2795170 D 272560 CDS YP_112064.1 53723079 3095914 complement(2796704..2797141) 1 NC_006351.1 Similar to Streptomyces coelicolor acetyltransferase SCO3363 or SCE94.14 SWALL:Q9X8M0 (EMBL:AL939116) (147 aa) fasta scores: E(): 1.6e-08, 38.73% id in 142 aa, and to the C-terminal region of Xanthomonas campestris acetyltransferase xcc4205 SWALL:Q8P373 (EMBL:AE012547) (203 aa) fasta scores: E(): 1.1e-05, 34.59% id in 159 aa; acetyltransferase (GNAT) family protein 2797141 3095914 BPSS2062 Burkholderia pseudomallei K96243 acetyltransferase (GNAT) family protein YP_112064.1 2796704 R 272560 CDS YP_112065.1 53723080 3095915 complement(2797101..2797703) 1 NC_006351.1 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Pseudomonas alcaligenes hypothetical protein SWALL:Q9F127 (EMBL:AF173167) (282 aa) fasta scores: E(): 2e-20, 45% id in 140 aa, and to Pseudomonas syringae hypothetical protein SWALL:Q9L6V8 (EMBL:AF232005) (507 aa) fasta scores: E(): 2.2e-19, 45.92% id in 135 aa; hypothetical protein 2797703 3095915 BPSS2063 Burkholderia pseudomallei K96243 hypothetical protein YP_112065.1 2797101 R 272560 CDS YP_112066.1 53723081 3095130 complement(2797880..2798065) 1 NC_006351.1 hypothetical protein 2798065 3095130 BPSS2063a Burkholderia pseudomallei K96243 hypothetical protein YP_112066.1 2797880 R 272560 CDS YP_112067.1 53723082 3095131 complement(2798378..2799457) 1 NC_006351.1 Similar to Comamonas acidovorans outer membrane porin protein 32 precursor omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 6.7e-16, 28.64% id in 370 aa, and to Ralstonia solanacearum porin signal peptide protein rsc2760 or rs00094 SWALL:Q8XVR9 (EMBL:AL646071) (353 aa) fasta scores: E(): 5.9e-46, 42.12% id in 349 aa. Similar to BPSL1029, 65.565% identity (66.854% ungapped) in 363 aa overlap; porin protein 2799457 3095131 BPSS2064 Burkholderia pseudomallei K96243 porin protein YP_112067.1 2798378 R 272560 CDS YP_112068.1 53723083 3097069 complement(2799869..2801308) 1 NC_006351.1 Similar to Vibrio harveyi fatty aldehyde dehydrogenase AldH SWALL:DHAF_VIBHA (SWALL:Q56694) (510 aa) fasta scores: E(): 9.7e-58, 40.3% id in 464 aa, and to Streptomyces coelicolor aldehyde dehydrogenase SCO1871 or SCi39.18c SWALL:Q93RV5 (EMBL:AL939110) (509 aa) fasta scores: E(): 1.8e-61, 43.81% id in 477 aa; fatty aldehyde dehydrogenase 2801308 3097069 BPSS2065 Burkholderia pseudomallei K96243 fatty aldehyde dehydrogenase YP_112068.1 2799869 R 272560 CDS YP_112069.1 53723084 3096444 complement(2801509..2802693) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo1289 SWALL:Q8ZGK2 (EMBL:AJ414147) (380 aa) fasta scores: E(): 3.3e-79, 55.95% id in 386 aa, and to Rhizobium loti hypothetical protein mll7369 SWALL:Q986G4 (EMBL:AP003011) (385 aa) fasta scores: E(): 2.2e-77, 54.92% id in 386 aa; hypothetical protein 2802693 3096444 BPSS2066 Burkholderia pseudomallei K96243 hypothetical protein YP_112069.1 2801509 R 272560 CDS YP_112070.1 53723085 3096445 complement(2802704..2803600) 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical protein ra0037 or sma0077 SWALL:Q931A7 (EMBL:AE007198) (295 aa) fasta scores: E(): 1.8e-46, 44.33% id in 291 aa, and to Rhizobium loti hypothetical protein mll7370 SWALL:Q986G3 (EMBL:AP003011) (299 aa) fasta scores: E(): 3.6e-39, 40.97% id in 288 aa; aldose 1-epimerase 2803600 3096445 BPSS2067 Burkholderia pseudomallei K96243 aldose 1-epimerase YP_112070.1 2802704 R 272560 CDS YP_112071.1 53723086 3096925 complement(2803594..2804364) 1 NC_006351.1 Similar to Escherichia coli gluconate 5-dehydrogenase IdnO SWALL:IDNO_ECOLI (SWALL:P39345) (254 aa) fasta scores: E(): 3.4e-18, 30.46% id in 256 aa, and to Rhizobium loti probable oxidoreductase mll7371 SWALL:Q986G2 (EMBL:AP003011) (252 aa) fasta scores: E(): 6.2e-52, 58.96% id in 251 aa; short chain dehydrogenase 2804364 3096925 BPSS2068 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_112071.1 2803594 R 272560 CDS YP_112072.1 53723087 3096926 complement(2804379..2805242) 1 NC_006351.1 Similar to Rhizobium loti ABC transporter ATP-binding protein mll7373 SWALL:Q986G1 (EMBL:AP003011) (243 aa) fasta scores: E(): 6.7e-53, 65.56% id in 241 aa, and to the C-terminal region of Escherichia coli ribose transport ATP-binding protein RbsA SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 1.8e-27, 41.07% id in 241 aa. CDS is extended at the N-terminus in comparison to orthologues; ABC transporter ATP-binding protein 2805242 3096926 BPSS2069 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_112072.1 2804379 R 272560 CDS YP_112073.1 53723088 3096010 complement(2805239..2806207) 1 NC_006351.1 Similar to Escherichia coli ribose transport system permease RbsC SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 2.7e-21, 29.39% id in 296 aa, and to Rhizobium meliloti ABC transporter permease ra0034 or sma0070 SWALL:Q931B0 (EMBL:AE007198) (327 aa) fasta scores: E(): 1.1e-72, 63.07% id in 325 aa; branched-chain amino acid transport system permease 2806207 3096010 BPSS2070 Burkholderia pseudomallei K96243 branched-chain amino acid transport system permease YP_112073.1 2805239 R 272560 CDS YP_112074.1 53723089 3095110 complement(2806228..2807226) 1 NC_006351.1 Similar to Escherichia coli D-allose-binding periplasmic protein precursor AlsB SWALL:ALSB_ECOLI (SWALL:P39265) (311 aa) fasta scores: E(): 2.2e-05, 23.74% id in 278 aa, and to Rhizobium loti hypothetical protein mll7376 SWALL:Q986F9 (EMBL:AP003011) (325 aa) fasta scores: E(): 1.2e-74, 59.94% id in 332 aa; hypothetical protein 2807226 3095110 BPSS2071 Burkholderia pseudomallei K96243 hypothetical protein YP_112074.1 2806228 R 272560 CDS YP_112075.1 53723090 3095111 complement(2807264..2808466) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll7377 SWALL:Q986F8 (EMBL:AP003011) (400 aa) fasta scores: E(): 4.6e-115, 71.17% id in 399 aa. Weakly similar to Escherichia coli starvation sensing protein RspA SWALL:RSPA_ECOLI (SWALL:P38104) (404 aa) fasta scores: E(): 1.6e-18, 24.68% id in 393 aa; mandelate racemase 2808466 3095111 BPSS2072 Burkholderia pseudomallei K96243 mandelate racemase YP_112075.1 2807264 R 272560 CDS YP_112076.1 53723091 3095711 complement(2808477..2809190) 1 NC_006351.1 Similar to Agrobacterium tumefaciens GntR family transcriptional regulator ATU0271 or AGR_C_464 SWALL:Q8UIM2 (EMBL:AE008999) (235 aa) fasta scores: E(): 5.4e-31, 43.36% id in 226 aa, and to Rhizobium loti transcriptional regulator mll7378 SWALL:Q986F7 (EMBL:AP003011) (224 aa) fasta scores: E(): 1e-29, 44.59% id in 222 aa; GntR family transcriptional regulator 2809190 3095711 BPSS2073 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_112076.1 2808477 R 272560 CDS YP_112077.1 53723092 3095712 2809322..2810212 1 NC_006351.1 Similar to Oryctolagus cuniculus senescence marker protein-30 RGM or SMP30 SWALL:SM30_RABIT (SWALL:Q9TTJ6) (299 aa) fasta scores: E(): 2.7e-21, 29.73% id in 296 aa, and to Rhizobium loti regucalcin homolog mlr7379 SWALL:Q986F6 (EMBL:AP003011) (301 aa) fasta scores: E(): 1.7e-37, 40.83% id in 289 aa; senescence marker protein-30 (SMP-30) family protein 2810212 3095712 BPSS2074 Burkholderia pseudomallei K96243 senescence marker protein-30 (SMP-30) family protein YP_112077.1 2809322 D 272560 CDS YP_112078.1 53723093 3094925 complement(2810654..2811283) 1 NC_006351.1 Similar to Pseudomonas putida hypothetical protein SWALL:Q9R9V2 (EMBL:AJ245436) (192 aa) fasta scores: E(): 4.8e-23, 41.43% id in 181 aa, and to Rhizobium sp. hypothetical protein Y4hQ SWALL:Y4HQ_RHISN (SWALL:P50361) (194 aa) fasta scores: E(): 1.3e-17, 35.23% id in 193 aa. Possible alternative translational start site; hypothetical protein 2811283 3094925 BPSS2075 Burkholderia pseudomallei K96243 hypothetical protein YP_112078.1 2810654 R 272560 CDS YP_112079.1 53723094 3095976 complement(2812870..2813217) 1 NC_006351.1 Similar to Escherichia coli hypothetical protein Hp4 SWALL:O88118 (EMBL:AF081284) (115 aa) fasta scores: E(): 3.5e-32, 69.56% id in 115 aa, and to Shigella flexneri 2a hypothetical protein SWALL:Q93F14 (EMBL:AF326777) (115 aa) fasta scores: E(): 1.5e-31, 67.82% id in 115 aa; hypothetical protein 2813217 3095976 BPSS2078 Burkholderia pseudomallei K96243 hypothetical protein YP_112079.1 2812870 R 272560 CDS YP_112080.1 53723095 3095977 complement(2813214..2813621) 1 NC_006351.1 Similar to Escherichia coli hypothetical protein L0013 SWALL:O85620 (EMBL:AF071034) (133 aa) fasta scores: E(): 1.8e-10, 36.76% id in 136 aa, and to Shigella flexneri 2a hypothetical protein SWALL:Q93F13 (EMBL:AF326777) (133 aa) fasta scores: E(): 3.2e-10, 36.76% id in 136 aa; DNA-binding protein 2813621 3095977 BPSS2079 Burkholderia pseudomallei K96243 DNA-binding protein YP_112080.1 2813214 R 272560 CDS YP_112081.1 53723096 3095034 complement(2814054..2816087) 1 NC_006351.1 hypothetical protein 2816087 3095034 BPSS2080 Burkholderia pseudomallei K96243 hypothetical protein YP_112081.1 2814054 R 272560 CDS YP_112082.1 53723097 3095353 complement(2816328..2818499) 1 NC_006351.1 Similar to Escherichia coli alpha-galactosidase RafA SWALL:RAFA_ECOLI (SWALL:P16551) (708 aa) fasta scores: E(): 2.3e-105, 39.97% id in 718 aa, and to Yersinia pestis alpha-galactosidase ypo1581 SWALL:Q8ZFU7 (EMBL:AJ414149) (708 aa) fasta scores: E(): 3.6e-108, 40.16% id in 712 aa; alpha-galactosidase 2818499 3095353 BPSS2081 Burkholderia pseudomallei K96243 alpha-galactosidase YP_112082.1 2816328 R 272560 CDS YP_112083.1 53723098 3095354 complement(2818504..2819355) 1 NC_006351.1 Similar to Rhizobium meliloti ABC transporter permease ra1243 or sma2309 SWALL:Q92XK1 (EMBL:AE007309) (273 aa) fasta scores: E(): 1.1e-63, 56.08% id in 271 aa, and to Thermus sp. T2 permease SWALL:O54314 (EMBL:Z93773) (274 aa) fasta scores: E(): 1.6e-44, 45.34% id in 258 aa; ABC transporter permease 2819355 3095354 BPSS2082 Burkholderia pseudomallei K96243 ABC transporter permease YP_112083.1 2818504 R 272560 CDS YP_112084.1 53723099 3095921 complement(2819356..2820309) 1 NC_006351.1 Similar to Rhizobium meliloti ABC transporter permease ra1242 or sma2307 SWALL:Q92XK2 (EMBL:AE007309) (307 aa) fasta scores: E(): 3.5e-53, 51.08% id in 276 aa, and to Listeria monocytogenes, and Listeria innocua hypothetical protein lmo0179 or lin0218 SWALL:Q92F88 (EMBL:AL591973) (292 aa) fasta scores: E(): 1.4e-31, 34.83% id in 267 aa. CDS is extended at the N-terminus in comparison to orthologues; ABC transporter permease 2820309 3095921 BPSS2083 Burkholderia pseudomallei K96243 ABC transporter permease YP_112084.1 2819356 R 272560 CDS YP_112085.1 53723100 3095922 complement(2820342..2821583) 1 NC_006351.1 Similar to Bradyrhizobium japonicum Blr3389 protein blr3389 SWALL:BAC48654 (EMBL:AP005947) (420 aa) fasta scores: E(): 1.3e-19, 25.18% id in 417 aa. N-terminus is weakly similar to the N-terminal region of Streptococcus mutans multiple sugar-binding protein precursor MsmE SWALL:MSME_STRMU (SWALL:Q00749) (420 aa) fasta scores: E(): 1.3e-11, 24.66% id in 373 aa; extracellular solute-binding protein 2821583 3095922 BPSS2084 Burkholderia pseudomallei K96243 extracellular solute-binding protein YP_112085.1 2820342 R 272560 CDS YP_112086.1 53723101 3095886 complement(2821619..2822863) 1 NC_006351.1 No significant database matches to the full length CDS. C-terminal region is similar to Escherichia coli maltose/maltodextrin transport ATP-binding protein MalK SWALL:MALK_ECOLI (SWALL:P02914) (371 aa) fasta scores: E(): 3.4e-59, 50.8% id in 374 aa, and to Vibrio cholerae maltose/maltodextrin ABC transporter ATP-binding protein vca0946 SWALL:Q9KL04 (EMBL:AE004421) (373 aa) fasta scores: E(): 1.6e-62, 51.75% id in 371 aa. CDS is extended at the C-terminus in comparison to orthologues. Similar to BPSL0833, 51.482% identity (52.909% ungapped) in 371 aa overlap; ABC transporter ATP-binding protein 2822863 3095886 BPSS2085 Burkholderia pseudomallei K96243 ABC transporter ATP-binding protein YP_112086.1 2821619 R 272560 CDS YP_112087.1 53723102 3096793 complement(2822906..2824966) 1 NC_006351.1 hypothetical protein 2824966 3096793 BPSS2086 Burkholderia pseudomallei K96243 hypothetical protein YP_112087.1 2822906 R 272560 CDS YP_112088.1 53723103 3096794 complement(2825317..2826375) 1 NC_006351.1 Similar to Escherichia coli and Shigella flexneri transcriptional repressor CytR SWALL:CYTR_ECOLI (SWALL:P06964) (341 aa) fasta scores: E(): 1.1e-26, 31.95% id in 338 aa, and to Thermoanaerobacter tengcongensis transcriptional regulator tte2576 SWALL:Q8R748 (EMBL:AE013198) (341 aa) fasta scores: E(): 2.8e-33, 36.17% id in 340 aa; LacI family regulatory protein 2826375 3096794 BPSS2087 Burkholderia pseudomallei K96243 LacI family regulatory protein YP_112088.1 2825317 R 272560 CDS YP_112089.1 53723104 3096481 2827766..2828551 1 NC_006351.1 hypothetical protein 2828551 3096481 BPSS2089 Burkholderia pseudomallei K96243 hypothetical protein YP_112089.1 2827766 D 272560 CDS YP_112090.1 53723105 3095507 complement(2829283..2829711) 1 NC_006351.1 Poor database matches. Similar to an internal region of Ralstonia solanacearum transposase rsc3179 or rs06078 SWALL:Q8XUK9 (EMBL:AL646074) (363 aa) fasta scores: E(): 1.8e-12, 37.64% id in 170 aa. Possible gene remnant. Similar to an internal region of PSS2051, 61.611% identity (75.581% ungapped) in 211 aa overlap; DNA-binding protein 2829711 3095507 BPSS2090 Burkholderia pseudomallei K96243 DNA-binding protein YP_112090.1 2829283 R 272560 CDS YP_112091.1 53723106 3096798 complement(2829708..2830487) 1 NC_006351.1 Possible gene remnant. No significant database matches. N-terminus is similar to the N-terminal regions of Yersinia pestis hypothetical protein ypo0762 SWALL:Q8ZHW7 (EMBL:AJ414144) (1438 aa) fasta scores: E(): 3.5e-18, 34.19% id in 193 aa, and Escherichia coli RhsD protein precursor b0497 SWALL:RHSD_ECOLI (SWALL:P16919) (1426 aa) fasta scores: E(): 2.4e-11, 33.15% id in 184 aa. N-terminal region is similar to an internal region of BPSS2054, 62.366% identity (62.366% ungapped) in 186 aa overlap; hypothetical protein 2830487 3096798 BPSS2091 Burkholderia pseudomallei K96243 hypothetical protein YP_112091.1 2829708 R 272560 CDS YP_112092.1 53723107 3095598 complement(2831227..2833431) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 9.6e-108, 42.52% id in 722 aa, and to Rhizobium loti hypothetical protein mll2357 SWALL:Q98IK7 (EMBL:AP002999) (775 aa) fasta scores: E(): 6.8e-92, 39.68% id in 751 aa. Similar to BPSS2056, 80.245% identity (80.245% ungapped) in 734 aa overlap; hypothetical protein 2833431 3095598 BPSS2093 Burkholderia pseudomallei K96243 hypothetical protein YP_112092.1 2831227 R 272560 CDS YP_112093.1 53723108 3095599 complement(2833428..2836094) 1 NC_006351.1 Similar to Escherichia coli ATPase subunit of an intracellular ATP-dependent protease ClpB or HtpM SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 1.1e-92, 38.66% id in 869 aa, and to Yersinia pestis Clp ATPase ypo2946 SWALL:Q8ZCN5 (EMBL:AJ414154) (891 aa) fasta scores: E(): 5.8e-161, 56.37% id in 855 aa. Similar to BPSL3101, 53.114% identity (53.539% ungapped) in 883 aa overlap, and to BPSS0174, 55.792% identity (60.624% ungapped) in 941 aa overlap, and to BPSS0116, 57.931% identity (58.810% ungapped) in 870 aa overlap; Clp protease ATPase 2836094 3095599 BPSS2094 Burkholderia pseudomallei K96243 Clp protease ATPase YP_112093.1 2833428 R 272560 CDS YP_112094.1 53723109 3096392 complement(2836073..2837551) 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein xac4141 SWALL:AAM38976 (EMBL:AE012064) (346 aa) fasta scores: E(): 2.7e-18, 38.75% id in 400 aa, and to Pseudomonas aeruginosa hypothetical protein pa0089 SWALL:Q9I743 (EMBL:AE004447) (348 aa) fasta scores: E(): 6.4e-17, 41.93% id in 372 aa. Possible alternative translational start site; hypothetical protein 2837551 3096392 BPSS2095 Burkholderia pseudomallei K96243 hypothetical protein YP_112094.1 2836073 R 272560 CDS YP_112095.1 53723110 3095467 complement(2837548..2839419) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0088 SWALL:Q9I744 (EMBL:AE004447) (619 aa) fasta scores: E(): 4.4e-110, 47.77% id in 628 aa, and to Xanthomonas axonopodis hypothetical protein xac4142 SWALL:AAM38977 (EMBL:AE012064) (627 aa) fasta scores: E(): 9.1e-109, 46.74% id in 629 aa; hypothetical protein 2839419 3095467 BPSS2096 Burkholderia pseudomallei K96243 hypothetical protein YP_112095.1 2837548 R 272560 CDS YP_112096.1 53723111 3095468 complement(2839424..2839960) 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein xac4143 SWALL:AAM38978 (EMBL:AE012064) (167 aa) fasta scores: E(): 4.3e-18, 40.96% id in 166 aa, and to Pseudomonas aeruginosa hypothetical protein pa0087 SWALL:Q9I745 (EMBL:AE004447) (169 aa) fasta scores: E(): 7.9e-18, 44.93% id in 158 aa; hypothetical protein 2839960 3095468 BPSS2097 Burkholderia pseudomallei K96243 hypothetical protein YP_112096.1 2839424 R 272560 CDS YP_112097.1 53723112 3095171 complement(2839991..2840482) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0085 SWALL:Q9I747 (EMBL:AE004447) (162 aa) fasta scores: E(): 5.4e-19, 40.24% id in 164 aa, and to Bradyrhizobium japonicum hypothetical protein bll3592 SWALL:BAC48857 (EMBL:AP005948) (161 aa) fasta scores: E(): 1.5e-18, 40.12% id in 162 aa; hypothetical protein 2840482 3095171 BPSS2098 Burkholderia pseudomallei K96243 hypothetical protein YP_112097.1 2839991 R 272560 CDS YP_112098.1 53723113 3095172 complement(2840542..2842050) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0084 SWALL:Q9I748 (EMBL:AE004447) (498 aa) fasta scores: E(): 3.9e-153, 72.83% id in 497 aa, and to Yersinia pestis hypothetical protein ypo2938 SWALL:Q8ZCP0 (EMBL:AJ414154) (500 aa) fasta scores: E(): 7e-153, 72.52% id in 495 aa. Similar to BPSS0098, 73.642% identity (73.790% ungapped) in 497 aa overlap, and to BPSS0172, 72.233% identity (72.672% ungapped) in 497 aa overlap, and to BPSS0517, 61.290% identity (61.414% ungapped) in 496 aa overlap; hypothetical protein 2842050 3095172 BPSS2099 Burkholderia pseudomallei K96243 hypothetical protein YP_112098.1 2840542 R 272560 CDS YP_112099.1 53723114 3096765 complement(2842043..2842621) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0083 SWALL:Q9I749 (EMBL:AE004447) (172 aa) fasta scores: E(): 2.7e-40, 68.82% id in 170 aa, and to Xanthomonas axonopodis hypothetical protein Xac4147 SWALL:AAM38982 (EMBL:AE012065) (169 aa) fasta scores: E(): 2e-38, 69.64% id in 168 aa, and to Salmonella typhi hypothetical protein Sty0297 SWALL:Q8Z970 (EMBL:AL627266) (180 aa) fasta scores: E(): 8.8e-38, 65.66% id in 166 aa. Similar to BPSS0097, 69.643% identity (70.482% ungapped) in 168 aa overlap, and to BPSS0173, 65.934% identity (65.934% ungapped) in 182 aa overlap; hypothetical protein 2842621 3096765 BPSS2100 Burkholderia pseudomallei K96243 hypothetical protein YP_112099.1 2842043 R 272560 CDS YP_112100.1 53723115 3095432 complement(2842684..2843763) 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein Xac4112 SWALL:AAM38947 (EMBL:AE012060) (347 aa) fasta scores: E(): 5.7e-23, 38.96% id in 367 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0082 SWALL:Q9I750 (EMBL:AE004447) (344 aa) fasta scores: E(): 3.8e-18, 35.79% id in 366 aa, and to Salmonella typhimurium, and Salmonella enterica subsp. enterica serovar Typhimurium cytoplasmic protein stm0266 or sciA SWALL:Q93IT5 (EMBL:AE008707) (351 aa) fasta scores: E(): 1.4e-13, 31.94% id in 360 aa; hypothetical protein 2843763 3095432 BPSS2101 Burkholderia pseudomallei K96243 hypothetical protein YP_112100.1 2842684 R 272560 CDS YP_112101.1 53723116 3095433 complement(2843816..2846431) 1 NC_006351.1 No significant database matches to the full length CDS. N-terminus is similar to the N-terminal region of Deinococcus radiodurans protein kinase dra0332 SWALL:Q9RYI0 (EMBL:AE001863) (524 aa) fasta scores: E(): 5.9e-16, 34.49% id in 403 aa. Internal region is weakly similar to an internal region of Streptomyces coelicolor multi-domain regulatory protein SCO2259 or SCC75A.05C SWALL:Q9RKR9 (EMBL:AL939112) (1334 aa) fasta scores: E(): 1.2e-07, 28.92% id in 491 aa; protein kinase 2846431 3095433 BPSS2102 Burkholderia pseudomallei K96243 protein kinase YP_112101.1 2843816 R 272560 CDS YP_112102.1 53723117 3097180 complement(2846642..2847574) 1 NC_006351.1 Similar to N-terminus of Pseudomonas aeruginosa hypothetical protein Pa0076 SWALL:Q9I756 (EMBL:AE004446) (226 aa) fasta scores: E(): 1.6e-05, 36.17% id in 141 aa, and to N-terminus of Rhizobium leguminosarum ImpM SWALL:Q93EC1 (EMBL:AF361470) (457 aa) fasta scores: E(): 2.4e-05, 28.98% id in 207 aa; hypothetical protein 2847574 3097180 BPSS2103 Burkholderia pseudomallei K96243 hypothetical protein YP_112102.1 2846642 R 272560 CDS YP_112103.1 53723118 3097181 complement(2847580..2851209) 1 NC_006351.1 Similar to Vibrio cholerae IcmF-related protein vca0120 or IcmF SWALL:Q9KN45 (EMBL:AE004353) (1181 aa) fasta scores: E(): 6.1e-46, 26.92% id in 1237 aa, and to Rhizobium loti hypothetical protein Mlr2360 SWALL:Q98IK4 (EMBL:AP002999) (1176 aa) fasta scores: E(): 3e-103, 33.08% id in 1209 aa, and to Xanthomonas axonopodis hypothetical protein Xac4119 SWALL:AAM38954 (EMBL:AE012061) (1176 aa) fasta scores: E(): 2.2e-77, 34.27% id in 1205 aa; hypothetical protein 2851209 3097181 BPSS2104 Burkholderia pseudomallei K96243 hypothetical protein YP_112103.1 2847580 R 272560 CDS YP_112104.1 53723119 3095757 complement(2851212..2852528) 1 NC_006351.1 Similar to Rhizobium leguminosarum ImpK SWALL:Q93EC3 (EMBL:AF361470) (510 aa) fasta scores: E(): 5.2e-19, 33.03% id in 451 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0078 SWALL:Q9I754 (EMBL:AE004447) (449 aa) fasta scores: E(): 5.4e-63, 47.12% id in 452 aa, and to Xanthomonas axonopodis hypothetical protein Xac4120 SWALL:Q8PF65 (EMBL:AE012061) (451 aa) fasta scores: E(): 1.2e-45, 40.29% id in 412 aa; hypothetical protein 2852528 3095757 BPSS2105 Burkholderia pseudomallei K96243 hypothetical protein YP_112104.1 2851212 R 272560 CDS YP_112105.1 53723120 3095960 complement(2852544..2853932) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0079 SWALL:Q9I753 (EMBL:AE004447) (444 aa) fasta scores: E(): 1.8e-58, 49.88% id in 451 aa, and to Yersinia pestis hypothetical protein ypo2934 or y1549 SWALL:Q8ZCP3 (EMBL:AJ414154) (449 aa) fasta scores: E(): 1.2e-54, 37% id in 454 aa, and to Xanthomonas axonopodis hypothetical protein Xac4121 SWALL:AAM38956 (EMBL:AE012061) (444 aa) fasta scores: E(): 1e-53, 46.44% id in 450 aa; hypothetical protein 2853932 3095960 BPSS2106 Burkholderia pseudomallei K96243 hypothetical protein YP_112105.1 2852544 R 272560 CDS YP_112106.1 53723121 3095961 complement(2853944..2854462) 1 NC_006351.1 Similar to Salmonella typhimurium outer membrane lipoprotein stm0280 SWALL:Q8ZRL4 (EMBL:AE008707) (178 aa) fasta scores: E(): 2.5e-15, 37.95% id in 166 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium SciN protein precursor SWALL:Q93IS2 (EMBL:AJ320483) (163 aa) fasta scores: E(): 3.1e-15, 38.96% id in 154 aa, and to Salmonella typhi probable lipoprotein sty0303 SWALL:Q8Z967 (EMBL:AL627266) (178 aa) fasta scores: E(): 3.4e-15, 40.37% id in 161 aa; hypothetical protein 2854462 3095961 BPSS2107 Burkholderia pseudomallei K96243 hypothetical protein YP_112106.1 2853944 R 272560 CDS YP_112107.1 53723122 3097247 2855102..2855503 1 NC_006351.1 Similar to Bordetella parapertussis lipoprotein SWALL:Q7W1G3 (EMBL:BX640425) (131 aa) fasta scores: E(): 6.1e-11, 41.07% id in 112 aa, and to Bordetella bronchiseptica lipoprotein SWALL:Q7WP73 (EMBL:BX640439) (131 aa) fasta scores: E(): 6.1e-11, 41.07% id in 112 aa; lipoprotein 2855503 3097247 BPSS2108 Burkholderia pseudomallei K96243 lipoprotein YP_112107.1 2855102 D 272560 CDS YP_112108.1 53723123 3097248 2855558..2856994 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein Pa0081 SWALL:Q9I751 (EMBL:AE004447) (497 aa) fasta scores: E(): 3e-14, 28.71% id in 491 aa, and to Rhizobium loti hypothetical protein Mlr2345 SWALL:Q98IL9 (EMBL:AP002999) (486 aa) fasta scores: E(): 5.3e-11, 27.13% id in 468 aa, and to Xanthomonas axonopodis hypothetical protein Xac4122 SWALL:AAM38957 (EMBL:AE012061) (438 aa) fasta scores: E(): 8.7e-11, 25.54% id in 462 aa; FHA-family protein 2856994 3097248 BPSS2109 Burkholderia pseudomallei K96243 FHA-family protein YP_112108.1 2855558 D 272560 CDS YP_112109.1 53723124 3095064 complement(2857037..2858941) 1 NC_006351.1 Similar to Xylella fastidiosa hypothetical protein Xf1451 SWALL:Q9PDC8 (EMBL:AE003975) (636 aa) fasta scores: E(): 1.5e-39, 28.15% id in 618 aa, and to Xanthomonas axonopodis hypothetical protein Xac2007 SWALL:AAM36869 (EMBL:AE011836) (642 aa) fasta scores: E(): 4.2e-38, 27.45% id in 641 aa, and to Xanthomonas campestris hypothetical protein Xcc1973 SWALL:AAM41262 (EMBL:AE012301) (642 aa) fasta scores: E(): 1.5e-36, 27.07% id in 628 aa; hypothetical protein 2858941 3095064 BPSS2110 Burkholderia pseudomallei K96243 hypothetical protein YP_112109.1 2857037 R 272560 CDS YP_112110.1 53723125 3095032 2859411..2860655 1 NC_006351.1 Similar to Bradyrhizobium japonicum USDA 110 BLL2502 protein SWALL:Q89SA3 (EMBL:AP005944) (428 aa) fasta scores: E(): 9.2e-53, 42.39% id in 401 aa, and to Rhodopseudomonas palustris possible FAD-dependent monooxygenase SWALL:Q6N3V5 (EMBL:BX572604) (430 aa) fasta scores: E(): 2.6e-44, 37.79% id in 426 aa; hypothetical protein 2860655 3095032 BPSS2111 Burkholderia pseudomallei K96243 hypothetical protein YP_112110.1 2859411 D 272560 CDS YP_112111.1 53723126 3095076 2861331..2861507 1 NC_006351.1 hypothetical protein 2861507 3095076 BPSS2113 Burkholderia pseudomallei K96243 hypothetical protein YP_112111.1 2861331 D 272560 CDS YP_112112.1 53723127 3095077 complement(2861989..2862693) 1 NC_006351.1 Similar to Achromobacter xylosoxidans oxidoreductase SWALL:Q8RMC9 (EMBL:AJ431208) (234 aa) fasta scores: E(): 4.1e-44, 54.7% id in 234 aa, and to Bradyrhizobium japonicum oxidoreductase bll5294 SWALL:BAC50559 (EMBL:AP005954) (234 aa) fasta scores: E(): 1.7e-41, 52.56% id in 234 aa, and to Rhizobium meliloti oxidoreductase r01874 or smc00136 SWALL:Q92PA5 (EMBL:AL591788) (234 aa) fasta scores: E(): 3.3e-41, 50.42% id in 234 aa; oxidoreductase/short-chain dehydrogenase 2862693 3095077 BPSS2114 Burkholderia pseudomallei K96243 oxidoreductase/short-chain dehydrogenase YP_112112.1 2861989 R 272560 CDS YP_112113.1 53723128 3094962 2862875..2863789 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 4.9e-35, 40.94% id in 298 aa, and to Rhizobium loti probable transcriptional regulator mlr1832 SWALL:Q98JQ4 (EMBL:AP002998) (299 aa) fasta scores: E(): 3.6e-54, 54.93% id in 284 aa, and to Rhizobium loti glycine cleavage system transcription activator mlr1973 SWALL:Q98JE9 (EMBL:AP002998) (303 aa) fasta scores: E(): 2.4e-37, 40.78% id in 304 aa; LysR family transcriptional regulator 2863789 3094962 BPSS2115 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_112113.1 2862875 D 272560 CDS YP_112114.1 53723129 3096802 complement(2864045..2865382) 1 NC_006351.1 catalyzes the formation of pyruvate from serine; D-serine dehydratase 2865382 dsdA 3096802 dsdA Burkholderia pseudomallei K96243 D-serine dehydratase YP_112114.1 2864045 R 272560 CDS YP_112115.1 53723130 3097152 2865479..2866420 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 2.1e-26, 35.48% id in 310 aa, and to Caulobacter crescentus transcriptional regulator, LysR family cc1117 SWALL:Q9A977 (EMBL:AE005790) (340 aa) fasta scores: E(): 2.3e-27, 37.01% id in 308 aa; LysR family transcriptional regulator 2866420 3097152 BPSS2117 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_112115.1 2865479 D 272560 CDS YP_112116.1 53723131 3097153 complement(2866651..2866956) 1 NC_006351.1 Similar to Rhodopseudomonas palustris hypothetical protein SWALL:Q6N615 (EMBL:BX572602) (107 aa) fasta scores: E(): 1.5e-08, 35.05% id in 97 aa, and to Gloeobacter violaceus PCC 7421 GLL2745 protein SWALL:Q7NGZ2 (EMBL:AP006577) (104 aa) fasta scores: E(): 1.3e-07, 38.94% id in 95 aa; hypothetical protein 2866956 3097153 BPSS2117A Burkholderia pseudomallei K96243 hypothetical protein YP_112116.1 2866651 R 272560 CDS YP_112117.1 53723132 3095045 complement(2867429..2868121) 1 NC_006351.1 Similar to Streptomyces peucetius ORF1 and ORF2 SWALL:Q9ZF16 (EMBL:AJ005575) (226 aa) fasta scores: E(): 2.6e-27, 42.08% id in 221 aa, and to Mycobacterium tuberculosis hypothetical 23.8 kDa protein rv1674c or mtv047.09c or mt1712 SWALL:O53921 (EMBL:AL022002) (218 aa) fasta scores: E(): 7e-36, 51.83% id in 218 aa; transcription regulator ArsR 2868121 3095045 BPSS2118 Burkholderia pseudomallei K96243 transcription regulator ArsR YP_112117.1 2867429 R 272560 CDS YP_112118.1 53723133 3095046 2868176..2868916 1 NC_006351.1 Similar to N-terminus of Methanosarcina acetivorans metallo-beta-lactamase ma1794 SWALL:Q8TPW0 (EMBL:AE010859) (481 aa) fasta scores: E(): 5e-25, 36.75% id in 234 aa, and to entire protein of Sulfolobus solfataricus hypothetical protein sso2072 sso2072 or c06001 SWALL:P95849 (EMBL:Y08256) (247 aa) fasta scores: E(): 3.1e-29, 44.49% id in 236 aa, and to entire protein of Sulfolobus tokodaii hypothetical protein St1629 st1629 SWALL:Q970G3 (EMBL:AP000987) (246 aa) fasta scores: E(): 9.8e-29, 42.41% id in 224 aa; metallo-beta-lactamase 2868916 3095046 BPSS2119 Burkholderia pseudomallei K96243 metallo-beta-lactamase YP_112118.1 2868176 D 272560 CDS YP_112119.1 53723134 3094940 2868936..2870162 1 NC_006351.1 Similar to Streptococcus pneumoniae, and Streptococcus pneumoniae multi-drug resistance efflux pump PmrA or sp0972 or spr0875 SWALL:PMRA_STRPN (SWALL:Q9ZEX9) (399 aa) fasta scores: E(): 9.6e-08, 23.82% id in 382 aa, and to Halobacterium sp. similar to sulfolobus solfactaricus orf c06004 vng6457c or vng6068C SWALL:O54630 (EMBL:AF016485) (421 aa) fasta scores: E(): 6.1e-58, 39.9% id in 401 aa, and to Sulfolobus solfataricus transport protein, sso2074 SWALL:Q97WP8 (EMBL:AE006814) (366 aa) fasta scores: E(): 2.4e-13, 28.93% id in 394 aa; sugar transport/efflux pump 2870162 3094940 BPSS2120 Burkholderia pseudomallei K96243 sugar transport/efflux pump YP_112119.1 2868936 D 272560 CDS YP_112120.1 53723135 3097190 2870209..2871330 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri cysteine desulfurase IscS or b2530 or c3056 or z3797 or ecs3396 or sf2577 SWALL:ISCS_ECOLI (SWALL:P39171) (404 aa) fasta scores: E(): 1.1e-52, 46.19% id in 368 aa, and to Thermoanaerobacter tengcongensis cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes NifS2 or tte2465 SWALL:Q8R7E9 (EMBL:AE013188) (384 aa) fasta scores: E(): 2.7e-54, 44.94% id in 376 aa, and to Methanosarcina thermophila probable cysteine desulfurase IscS or NifS SWALL:ISCS_METTE (SWALL:P57795) (404 aa) fasta scores: E(): 5.5e-53, 45.3% id in 373 aa; cysteine desulfurase 2871330 3097190 BPSS2121 Burkholderia pseudomallei K96243 cysteine desulfurase YP_112120.1 2870209 D 272560 CDS YP_112121.1 53723136 3097191 complement(2871821..2872219) 1 NC_006351.1 hypothetical protein 2872219 3097191 BPSS2122 Burkholderia pseudomallei K96243 hypothetical protein YP_112121.1 2871821 R 272560 CDS YP_112122.1 53723137 3097053 2872672..2874006 1 NC_006351.1 Similar to Streptomyces avermitilis MFS transporter SWALL:Q829Y1 (EMBL:AP005046) (434 aa) fasta scores: E(): 6.7e-58, 42.27% id in 414 aa, and to Pseudomonas aeruginosa probable MFS transporter SWALL:Q9HY31 (EMBL:AE004780) (469 aa) fasta scores: E(): 2e-63, 45.16% id in 434 aa; transporter protein 2874006 3097053 BPSS2123 Burkholderia pseudomallei K96243 transporter protein YP_112122.1 2872672 D 272560 CDS YP_112123.1 53723138 3097054 2874595..2875518 1 NC_006351.1 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.1e-20, 33.11% id in 305 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2383 SWALL:Q9I196 (EMBL:AE004664) (306 aa) fasta scores: E(): 7e-54, 53.46% id in 303 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc2665 or rs04540 SWALL:Q8XW10 (EMBL:AL646071) (296 aa) fasta scores: E(): 2.2e-32, 43.53% id in 294 aa; LysR family transcriptional regulator 2875518 3097054 BPSS2124 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_112123.1 2874595 D 272560 CDS YP_112124.1 53723139 3095025 2875583..2876725 1 NC_006351.1 Similar to Neisseria meningitidis L-lactate dehydrogenase LldA or nma1592 SWALL:Q9JTX1 (EMBL:AL162756) (390 aa) fasta scores: E(): 8.4e-92, 61.93% id in 373 aa, and to Pseudomonas aeruginosa L-lactate dehydrogenase LldA or pa2382 SWALL:Q9I197 (EMBL:AE004664) (383 aa) fasta scores: E(): 1.4e-103, 72.41% id in 377 aa, and to Agrobacterium tumefaciens L-lactate dehydrogenase LldA or atu2318 or agr_c_4216 SWALL:Q8UD10 (EMBL:AE009181) (382 aa) fasta scores: E(): 3.7e-94, 64.17% id in 374 aa; L-lactate dehydrogenase 2876725 lldA 3095025 lldA Burkholderia pseudomallei K96243 L-lactate dehydrogenase YP_112124.1 2875583 D 272560 CDS YP_112125.1 53723140 3095071 complement(2876902..2877750) 1 NC_006351.1 Similar to Burkholderia cepacia 2,4-dinitrotoluene oxygenase DntG SWALL:Q8VUC7 (EMBL:AF169302) (281 aa) fasta scores: E(): 1e-27, 37.5% id in 272 aa, and to Yersinia pestis hydrolase ypo1566 or y2599 SWALL:Q8ZFW1 (EMBL:AJ414149) (280 aa) fasta scores: E(): 5.5e-79, 69.42% id in 278 aa, and to Brucella melitensis 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase bmei1708 SWALL:Q8YF19 (EMBL:AE009604) (301 aa) fasta scores: E(): 1.5e-72, 63.92% id in 280 aa; FAA-hydrolase 2877750 3095071 BPSS2126 Burkholderia pseudomallei K96243 FAA-hydrolase YP_112125.1 2876902 R 272560 CDS YP_112126.1 53723141 3094923 2878261..2879085 1 NC_006351.1 Similar to Escherichia coli transcriptional regulator KdgR or b1827 SWALL:KDGR_ECOLI (SWALL:P76268) (263 aa) fasta scores: E(): 1.3e-08, 26.86% id in 242 aa, and to Rhizobium meliloti transcriptional regulator protein rb0681 or smb21102 SWALL:Q92VL9 (EMBL:AL603644) (260 aa) fasta scores: E(): 1.2e-41, 49.6% id in 256 aa. CDS is extended at the N-terminus in comparison to similar proteins; IclR family transcriptional regulator 2879085 3094923 BPSS2127 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_112126.1 2878261 D 272560 CDS YP_112127.1 53723142 3094924 2879391..2880794 1 NC_006351.1 catalyzes the formation of indole-3-acetic acid from indole-3-acetamide; indole acetimide hydrolase 2880794 3094924 BPSS2128 Burkholderia pseudomallei K96243 indole acetimide hydrolase YP_112127.1 2879391 D 272560 CDS YP_112128.1 53723143 3094992 2880980..2881531 1 NC_006351.1 hypothetical protein 2881531 3094992 BPSS2129 Burkholderia pseudomallei K96243 hypothetical protein YP_112128.1 2880980 D 272560 CDS YP_112129.1 53723144 3094993 complement(2882057..2884420) 1 NC_006351.1 Similar to Pyrococcus furiosus acetyl-CoA synthetase AcdA or pf1540 SWALL:Q9Y8L1 (EMBL:AJ240061) (462 aa) fasta scores: E(): 3.9e-24, 30.9% id in 453 aa, and to Rhizobium loti hypothetical protein Mlr6591 SWALL:Q988U3 (EMBL:AP003009) (893 aa) fasta scores: E(): 1.3e-34, 33.88% id in 903 aa, and to Rhizobium meliloti hypothetical protein ra0619 or sma1146 SWALL:Q92Z73 (EMBL:AE007251) (899 aa) fasta scores: E(): 1.4e-32, 31.22% id in 903 aa; acetyl-CoA synthetase 2884420 3094993 BPSS2130 Burkholderia pseudomallei K96243 acetyl-CoA synthetase YP_112129.1 2882057 R 272560 CDS YP_112130.1 53723145 3095154 complement(2885962..2886252) 1 NC_006351.1 Similar to Ralstonia solanacearum HNS-like transcription regulator protein rsp0335 or rs00711 SWALL:Q8XSY2 (EMBL:AL646078) (96 aa) fasta scores: E(): 1.6e-13, 50.51% id in 97 aa; hypothetical protein 2886252 3095154 BPSS2131 Burkholderia pseudomallei K96243 hypothetical protein YP_112130.1 2885962 R 272560 CDS YP_112131.1 53723146 3095344 complement(2886355..2886504) 1 NC_006351.1 hypothetical protein 2886504 3095344 BPSS2131a Burkholderia pseudomallei K96243 hypothetical protein YP_112131.1 2886355 R 272560 CDS YP_112132.1 53723147 3095345 complement(2886710..2887267) 1 NC_006351.1 Similar to Chromobacterium violaceum hypothetical protein CV3234 SWALL:Q7NT30 (EMBL:AE016921) (179 aa) fasta scores: E(): 6.4e-22, 43.94% id in 157 aa; hypothetical protein 2887267 3095345 BPSS2131b Burkholderia pseudomallei K96243 hypothetical protein YP_112132.1 2886710 R 272560 CDS YP_112133.1 53723148 3095355 complement(2887571..2889091) 1 NC_006351.1 Similar to Burkholderia sp. RP007 transcriptional regulator PhnR SWALL:Q9ZHH9 (EMBL:AF061751) (562 aa) fasta scores: E(): 5e-35, 40.37% id in 374 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2005 SWALL:Q9I2A4 (EMBL:AE004627) (481 aa) fasta scores: E(): 2.6e-81, 58.6% id in 488 aa, and to Bacillus halodurans transcriptional regulator bh3899 SWALL:Q9K633 (EMBL:AP001520) (559 aa) fasta scores: E(): 1.7e-41, 35.3% id in 473 aa; Fis family transcriptional regulator 2889091 3095355 BPSS2132 Burkholderia pseudomallei K96243 Fis family transcriptional regulator YP_112133.1 2887571 R 272560 CDS YP_112134.1 53723149 3095356 2889396..2890799 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical transmembrane protein RS01064 SWALL:Q8XWF6 (EMBL:AL646070) (466 aa) fasta scores: E(): 5.3e-124, 73.19% id in 470 aa, and to Pseudomonas putida membrane protein, SWALL:Q88IC5 (EMBL:AE016785) (463 aa) fasta scores: E(): 2.2e-122, 71.52% id in 467 aa; hypothetical protein 2890799 3095356 BPSS2133 Burkholderia pseudomallei K96243 hypothetical protein YP_112134.1 2889396 D 272560 CDS YP_112135.1 53723150 3095193 2891157..2891402 1 NC_006351.1 hypothetical protein 2891402 3095193 BPSS2134 Burkholderia pseudomallei K96243 hypothetical protein YP_112135.1 2891157 D 272560 CDS YP_112136.1 53723151 3095429 2891557..2892549 1 NC_006351.1 Similar to Xanthomonas axonopodis hypothetical protein Xac1749 SWALL:AAM36615 (EMBL:AE011807) (330 aa) fasta scores: E(): 3e-61, 54.25% id in 317 aa, and to Xanthomonas campestris hypothetical protein Xcc1731 SWALL:AAM41024 (EMBL:AE012274) (330 aa) fasta scores: E(): 4.6e-61, 52.87% id in 331 aa, and to Ralstonia solanacearum probable transmembrane protein rsp0396 or rs00824 SWALL:Q8XSS1 (EMBL:AL646078) (326 aa) fasta scores: E(): 2.4e-39, 38.9% id in 329 aa; DedA family transmembrane protein 2892549 3095429 BPSS2135 Burkholderia pseudomallei K96243 DedA family transmembrane protein YP_112136.1 2891557 D 272560 CDS YP_112137.1 53723152 3095430 complement(2892881..2894323) 1 NC_006351.1 Similar to Pseudomonas aeruginosa porin D precursor OprD or pa0958 SWALL:PORD_PSEAE (SWALL:P32722) (443 aa) fasta scores: E(): 2.2e-32, 35.58% id in 444 aa, and to Pseudomonas aeruginosa probable porin pa4501 SWALL:Q9HVS0 (EMBL:AE004864) (484 aa) fasta scores: E(): 2.8e-43, 33.66% id in 505 aa; hypothetical protein 2894323 3095430 BPSS2136 Burkholderia pseudomallei K96243 hypothetical protein YP_112137.1 2892881 R 272560 CDS YP_112138.1 53723153 3097256 complement(2894499..2895632) 1 NC_006351.1 Similar to Salmonella typhimurium oligopeptide transport ATP-binding protein OppF or stm1742 SWALL:OPPF_SALTY (SWALL:P08007) (334 aa) fasta scores: E(): 1e-57, 58.07% id in 322 aa, and to Yersinia pestis oligopeptide transport ATP-binding protein OppF or ypo2186 or y2030 SWALL:Q8ZEI4 (EMBL:AJ414151) (333 aa) fasta scores: E(): 1.1e-58, 59.31% id in 322 aa. CDS is extended at the N-terminus in comparison to orthologues; oligopeptide transport ATP-binding ABC transport protein 2895632 oppF 3097256 oppF Burkholderia pseudomallei K96243 oligopeptide transport ATP-binding ABC transport protein YP_112138.1 2894499 R 272560 CDS YP_112139.1 53723154 3097002 complement(2895629..2896618) 1 NC_006351.1 Similar to Salmonella typhimurium oligopeptide transport ATP-binding protein OppD or stm1743 SWALL:OPPD_SALTY (SWALL:P04285) (335 aa) fasta scores: E(): 1.3e-59, 57.45% id in 322 aa, and to Yersinia pestis oligopeptide transport ATP-binding protein OppD or ypo2185 or y2029 SWALL:Q8ZEI5 (EMBL:AJ414151) (333 aa) fasta scores: E(): 2.8e-61, 59% id in 322 aa, and to Salmonella typhi oligopeptide transport ATP-binding protein OppD sty1308 SWALL:Q8Z7E8 (EMBL:AL627269) (335 aa) fasta scores: E(): 8.8e-60, 57.76% id in 322 aa; oligopeptide transport ATP-binding ABC transport protein 2896618 oppD 3097002 oppD Burkholderia pseudomallei K96243 oligopeptide transport ATP-binding ABC transport protein YP_112139.1 2895629 R 272560 CDS YP_112140.1 53723155 3095292 complement(2896620..2897522) 1 NC_006351.1 Similar to Salmonella typhimurium oligopeptide transport system permease OppC or stm1744 SWALL:OPPC_SALTY (SWALL:P08006) (302 aa) fasta scores: E(): 1e-56, 54.74% id in 274 aa, and to Vibrio cholerae oligopeptide ABC transporter permease vc1093 SWALL:Q9KT12 (EMBL:AE004190) (300 aa) fasta scores: E(): 2.2e-57, 54.24% id in 271 aa, and to Haemophilus influenzae oligopeptide transport system permease OppC or hi1122 SWALL:OPPC_HAEIN (SWALL:P45053) (311 aa) fasta scores: E(): 7e-57, 54.01% id in 274 aa; oligopeptide transport system permease 2897522 oppC 3095292 oppC Burkholderia pseudomallei K96243 oligopeptide transport system permease YP_112140.1 2896620 R 272560 CDS YP_112141.1 53723156 3095291 complement(2897534..2898472) 1 NC_006351.1 Similar to Salmonella typhimurium oligopeptide transport system permease OppB or stm1745 SWALL:OPPB_SALTY (SWALL:P08005) (306 aa) fasta scores: E(): 1e-59, 48.71% id in 312 aa, and to Yersinia pestis oligopeptide transport system permease OppB or ypo2183 or y2027 SWALL:Q8ZEI7 (EMBL:AJ414151) (306 aa) fasta scores: E(): 2.1e-61, 51.6% id in 312 aa, and to Haemophilus influenzae oligopeptide transport system permease OppB or hi1123 SWALL:OPPB_HAEIN (SWALL:P45054) (306 aa) fasta scores: E(): 8.8e-61, 51.92% id in 312 aa; oligopeptide transport system permease 2898472 oppB 3095291 oppB Burkholderia pseudomallei K96243 oligopeptide transport system permease YP_112141.1 2897534 R 272560 CDS YP_112142.1 53723157 3095325 complement(2898490..2900154) 1 NC_006351.1 Similar to Salmonella typhimurium periplasmic oligopeptide-binding protein precursor OppA or stm1746 SWALL:OPPA_SALTY (SWALL:P06202) (543 aa) fasta scores: E(): 1e-86, 42.93% id in 545 aa, and to Escherichia coli O157:H7 oligopeptide transport, periplasmic binding protein OppA or z2019 or ecs1743 SWALL:Q8XDA4 (EMBL:AE005341) (543 aa) fasta scores: E(): 6.6e-87, 42.75% id in 545 aa; periplasmic oligopeptide-binding protein precursor 2900154 oppA 3095325 oppA Burkholderia pseudomallei K96243 periplasmic oligopeptide-binding protein precursor YP_112142.1 2898490 R 272560 CDS YP_112143.1 53723158 3095015 complement(2900290..2900871) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa4987 SWALL:Q9HUH8 (EMBL:AE004911) (199 aa) fasta scores: E(): 1.2e-15, 35.71% id in 182 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa4499 SWALL:Q9HVS2 (EMBL:AE004863) (187 aa) fasta scores: E(): 5.9e-15, 32.58% id in 178 aa, and to Fusobacterium nucleatum transcriptional regulator, merr family fn1928 SWALL:Q8RHS0 (EMBL:AE010495) (184 aa) fasta scores: E(): 1.6e-13, 31.52% id in 184 aa; MerR family transcriptional regulator 2900871 3095015 BPSS2142 Burkholderia pseudomallei K96243 MerR family transcriptional regulator YP_112143.1 2900290 R 272560 CDS YP_112144.1 53723159 3095016 2901507..2903009 1 NC_006351.1 Similar to Lactococcus lactis di-/tripeptide transporter DtpT or ll0702 SWALL:DTPT_LACLA (SWALL:P36574) (497 aa) fasta scores: E(): 4e-21, 29.36% id in 453 aa, and to Salmonella typhimurium pot family, peptide transport protein YdgR or stm1452 SWALL:Q8ZPM6 (EMBL:AE008763) (501 aa) fasta scores: E(): 8.5e-68, 39.66% id in 484 aa. Possible alternative translation start site after codon 18; POT-family proton dependent transporter 2903009 3095016 BPSS2143 Burkholderia pseudomallei K96243 POT-family proton dependent transporter YP_112144.1 2901507 D 272560 CDS YP_112145.1 53723160 3095149 2903449..2903652 1 NC_006351.1 hypothetical protein 2903652 3095149 BPSS2144 Burkholderia pseudomallei K96243 hypothetical protein YP_112145.1 2903449 D 272560 CDS YP_112146.1 53723161 3095443 complement(2903723..2905414) 1 NC_006351.1 Similar to Streptomyces coelicolor secreted protein sco6608 or sc1f2.05 SWALL:O86542 (EMBL:AL939128) (552 aa) fasta scores: E(): 1.1e-11, 37.06% id in 580 aa, and to Clostridium acetobutylicum uncharaterized conserved protein, YomE b.subtilis ortholog cac2633 SWALL:Q97FU3 (EMBL:AE007760) (354 aa) fasta scores: E(): 1.3e-07, 28.15% id in 238 aa; hypothetical protein 2905414 3095443 BPSS2145 Burkholderia pseudomallei K96243 hypothetical protein YP_112146.1 2903723 R 272560 CDS YP_112147.1 53723162 3095444 complement(2905720..2906661) 1 NC_006351.1 Similar to Burkholderia cepacia DntR SWALL:Q8VUD7 (EMBL:AF169302) (301 aa) fasta scores: E(): 1.3e-33, 33.33% id in 297 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family atu5197 or agr_pat_273 SWALL:Q8UKC6 (EMBL:AE008942) (325 aa) fasta scores: E(): 1.6e-35, 40.61% id in 293 aa, and to Ralstonia sp. U2 LysR-like regular protein NagR SWALL:Q9EXL7 (EMBL:AF036940) (301 aa) fasta scores: E(): 5.3e-34, 33.67% id in 297 aa; LysR family transcriptional regulator 2906661 3095444 BPSS2146 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_112147.1 2905720 R 272560 CDS YP_112148.1 53723163 3095269 complement(2907228..2908088) 1 NC_006351.1 IS element protein 2908088 3095269 BPSS2148 Burkholderia pseudomallei K96243 IS element protein YP_112148.1 2907228 R 272560 CDS YP_112149.1 53723164 3095933 complement(2908085..2908387) 1 NC_006351.1 transposase 2908387 3095933 BPSS2148a Burkholderia pseudomallei K96243 transposase YP_112149.1 2908085 R 272560 CDS YP_112150.1 53723165 3095737 complement(2908478..2909989) 1 NC_006351.1 Similar to Mycobacterium smegmatis hypothetical 50.9 kDa protein SWALL:Q938D1 (EMBL:AY054120) (477 aa) fasta scores: E(): 1.7e-23, 29.83% id in 476 aa, and to Agrobacterium tumefaciens hypothetical protein atu3361 atu3361 or agr_l_2924 SWALL:Q8UAL2 (EMBL:AE009266) (448 aa) fasta scores: E(): 1.8e-21, 32.57% id in 442 aa, and to Methanobacterium thermoautotrophicum conserved protein mth965 SWALL:O27046 (EMBL:AE000870) (452 aa) fasta scores: E(): 3.2e-21, 32.25% id in 400 aa; MmgE/Prp family protein 2909989 3095737 BPSS2149 Burkholderia pseudomallei K96243 MmgE/Prp family protein YP_112150.1 2908478 R 272560 CDS YP_112151.1 53723166 3095738 complement(2909986..2910858) 1 NC_006351.1 Similar to Rhodococcus erythropolis citrate lyase SWALL:Q8VQP0 (EMBL:AF453714) (291 aa) fasta scores: E(): 4.1e-21, 33.92% id in 283 aa, and to Streptomyces coelicolor citrate lyase beta chain sco2033 or sc4g6.02 SWALL:Q9S2U9 (EMBL:AL939111) (274 aa) fasta scores: E(): 4e-36, 46.15% id in 273 aa; citrate lyase 2910858 3095738 BPSS2150 Burkholderia pseudomallei K96243 citrate lyase YP_112151.1 2909986 R 272560 CDS YP_112152.1 53723167 3095677 complement(2910855..2912156) 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein sco2032 or sc3a3.10 SWALL:Q9S2Y3 (EMBL:AL939111) (404 aa) fasta scores: E(): 6.1e-99, 63.23% id in 408 aa, and to Caulobacter crescentus hypothetical protein Cc3562 SWALL:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 3.3e-62, 43.46% id in 398 aa. CDS is extended at the N-terminus in comparison to some orthologues; acyl-CoA transferase 2912156 3095677 BPSS2151 Burkholderia pseudomallei K96243 acyl-CoA transferase YP_112152.1 2910855 R 272560 CDS YP_112153.1 53723168 3095678 complement(2912215..2913381) 1 NC_006351.1 Limited similarity to Methylobacterium extorquens alcohol dehydrogenase AdhA SWALL:Q49134 (EMBL:L48340) (432 aa) fasta scores: E(): 0.0066, 21.69% id in 378 aa; zinc-binding dehydrogenase 2913381 3095678 BPSS2152 Burkholderia pseudomallei K96243 zinc-binding dehydrogenase YP_112153.1 2912215 R 272560 CDS YP_112154.1 53723169 3095760 complement(2913435..2914022) 1 NC_006351.1 Similar to Streptomyces coelicolor hydrolase sco0748 or scf81.07 SWALL:Q9RJE4 (EMBL:AL939106) (193 aa) fasta scores: E(): 3.4e-31, 52.15% id in 186 aa, and to Salmonella typhimurium, and Salmonella typhi isochorismatase YecD or stm1902 or sty2110 SWALL:Q8XEW8 (EMBL:AE008785) (188 aa) fasta scores: E(): 4.9e-25, 47.25% id in 182 aa, and to Bacillus subtilis hypothetical isochorismatase YwoC SWALL:YWOC_BACSU (SWALL:P94573) (189 aa) fasta scores: E(): 4.9e-24, 48.86% id in 176 aa; isochorismatase 2914022 3095760 BPSS2153 Burkholderia pseudomallei K96243 isochorismatase YP_112154.1 2913435 R 272560 CDS YP_112155.1 53723170 3095837 complement(2914055..2915485) 1 NC_006351.1 Similar to Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA SWALL:TCMA_STRGA (SWALL:P39886) (538 aa) fasta scores: E(): 1.5e-23, 28.66% id in 450 aa, and to Bacillus subtilis hypothetical protein YwoD SWALL:P94574 (EMBL:Z82987) (452 aa) fasta scores: E(): 4.7e-41, 32.88% id in 447 aa, and to Burkholderia cepacia major facilitator superfamily transporter homolog SWALL:Q9RPH2 (EMBL:AF158699) (531 aa) fasta scores: E(): 1.3e-25, 29.67% id in 455 aa; major facilitator transporter 2915485 3095837 BPSS2154 Burkholderia pseudomallei K96243 major facilitator transporter YP_112155.1 2914055 R 272560 CDS YP_112156.1 53723171 3095838 complement(2916019..2917482) 1 NC_006351.1 Similar to Bacillus subtilis arabinose-proton symporter AraE SWALL:ARAE_BACSU (SWALL:P96710) (464 aa) fasta scores: E(): 3.7e-14, 23.21% id in 405 aa, and to Xanthomonas campestris MFS transporter xcc1685 SWALL:AAM40979 (EMBL:AE012270) (468 aa) fasta scores: E(): 8.4e-89, 53.72% id in 456 aa, and to Xanthomonas axonopodis MFS transporter xac1705 SWALL:AAM36572 (EMBL:AE011802) (474 aa) fasta scores: E(): 6.4e-87, 52.57% id in 466 aa; major facilitator transporter 2917482 3095838 BPSS2155 Burkholderia pseudomallei K96243 major facilitator transporter YP_112156.1 2916019 R 272560 CDS YP_112157.1 53723172 3095890 complement(2917573..2918580) 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein sco6307 sco6307 or scif3.09C SWALL:Q93RT4 (EMBL:AL939127) (320 aa) fasta scores: E(): 2.6e-12, 36.18% id in 351 aa; hypothetical protein 2918580 3095890 BPSS2156 Burkholderia pseudomallei K96243 hypothetical protein YP_112157.1 2917573 R 272560 CDS YP_112158.1 53723173 3095891 complement(2918645..2919922) 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein sco2032 or sc3a3.10 SWALL:Q9S2Y3 (EMBL:AL939111) (404 aa) fasta scores: E(): 1.3e-58, 43.32% id in 397 aa, and to Caulobacter crescentus hypothetical protein Cc3562 SWALL:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 4.4e-54, 38.26% id in 426 aa, and to Ralstonia solanacearum hypothetical protein rsc1197 or rs05729 SWALL:Q8Y047 (EMBL:AL646063) (405 aa) fasta scores: E(): 4.9e-50, 40.9% id in 396 aa. Selfmatch to BPSS2151 fasta scores: E():2.2e-59, 45.3% id in 404 aa.; acyl-CoA transferase 2919922 3095891 BPSS2157 Burkholderia pseudomallei K96243 acyl-CoA transferase YP_112158.1 2918645 R 272560 CDS YP_112159.1 53723174 3095638 complement(2919996..2920745) 1 NC_006351.1 Similar to Pseudomonas putida efflux pump regulator SrpS SWALL:Q9R9U0 (EMBL:AF061937) (259 aa) fasta scores: E(): 1.1e-06, 31.81% id in 154 aa, and to Rhodococcus globerulus regulatory protein hppR SWALL:O05148 (EMBL:U89712) (206 aa) fasta scores: E(): 1e-11, 34.61% id in 182 aa, and to Corynebacterium glutamicum transcriptional regulator cgl1314 SWALL:BAB98707 (EMBL:AP005278) (235 aa) fasta scores: E(): 1.4e-10, 28.64% id in 206 aa; IclR family transcriptional regulator 2920745 3095638 BPSS2158 Burkholderia pseudomallei K96243 IclR family transcriptional regulator YP_112159.1 2919996 R 272560 CDS YP_112160.1 53723175 3095537 2920989..2921894 1 NC_006351.1 Similar to Leuconostoc mesenteroides citrate lyase beta chain CitE SWALL:CILB_LEUMC (SWALL:O53078) (302 aa) fasta scores: E(): 2.9e-19, 30.24% id in 291 aa, and to Rhizobium loti probable similar to beta subunit of citrate lyase msi180 SWALL:CAD31585 (EMBL:AL672113) (304 aa) fasta scores: E(): 3.5e-37, 46.07% id in 280 aa, and to Caulobacter crescentus citrate lyase beta subunit, cc3659 SWALL:Q9A2A7 (EMBL:AE006024) (295 aa) fasta scores: E(): 8.1e-23, 36.82% id in 296 aa; citrate lyase subunit beta 2921894 3095537 BPSS2159 Burkholderia pseudomallei K96243 citrate lyase subunit beta YP_112160.1 2920989 D 272560 CDS YP_112161.1 53723176 3095538 2922210..2923289 1 NC_006351.1 Similar to Burkholderia cepacia major porin protein Opcp1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 3.7e-15, 31.59% id in 383 aa, and to Ralstonia solanacearum outer membrane porin signal peptide protein rsc2855 or rs00250 SWALL:Q8XVH6 (EMBL:AL646072) (389 aa) fasta scores: E(): 7.3e-30, 34.77% id in 394 aa, and to Ralstonia solanacearum porin signal peptide protein rsc2933 or rs00157 SWALL:Q8XV98 (EMBL:AL646072) (379 aa) fasta scores: E(): 4.4e-21, 32.46% id in 345 aa; outer membrane porin protein 2923289 3095538 BPSS2160 Burkholderia pseudomallei K96243 outer membrane porin protein YP_112161.1 2922210 D 272560 CDS YP_112162.1 53723177 3095940 2923331..2924806 1 NC_006351.1 Similar to Aeropyrum pernix hypothetical protein Ape2147 SWALL:Q9Y9Z2 (EMBL:AP000063) (479 aa) fasta scores: E(): 1.8e-57, 39.46% id in 446 aa, and to Pyrobaculum aerophilum propionate catabolism protein PrpD pae1717 SWALL:Q8ZWM4 (EMBL:AE009835) (453 aa) fasta scores: E(): 2.4e-50, 36.46% id in 447 aa, and to Corynebacterium glutamicum uncharacterized protein involved in propionate catabolism cgl2538 SWALL:BAB99931 (EMBL:AP005282) (457 aa) fasta scores: E(): 3.2e-39, 31.17% id in 433 aa; MmgE/PrpD family protein 2924806 3095940 BPSS2161 Burkholderia pseudomallei K96243 MmgE/PrpD family protein YP_112162.1 2923331 D 272560 CDS YP_112163.1 53723178 3095941 complement(2924882..2926009) 1 NC_006351.1 Similar to Bradyrhizobium japonicum Blr1102 protein SWALL:BAC46367 (EMBL:AP005939) (415 aa) fasta scores: E(): 6.4e-18, 28.65% id in 349 aa, and to Rhodobacter sphaeroides quorum sensing OpgC SWALL:Q9FA51 (EMBL:AF016298) (399 aa) fasta scores: E(): 1.1e-16, 29.82% id in 342 aa, and to Rhizobium meliloti hypothetical transmembrane protein smc04381 r03285 or smc04381 SWALL:Q92L11 (EMBL:AL591793) (385 aa) fasta scores: E(): 1.3e-16, 25.38% id in 327 aa; hypothetical protein 2926009 3095941 BPSS2162 Burkholderia pseudomallei K96243 hypothetical protein YP_112163.1 2924882 R 272560 CDS YP_112164.1 53723179 3097034 complement(2926408..2927301) 1 NC_006351.1 Similar to Pseudomonas aeruginosa chloramphenicol-sensitive protein RarD or pa3473 SWALL:RARD_PSEAE (SWALL:O68827) (299 aa) fasta scores: E(): 7.6e-52, 54.79% id in 292 aa, and to Haemophilus influenzae hypothetical protein Hi0680 SWALL:Y680_HAEIN (SWALL:Q57389) (298 aa) fasta scores: E(): 3.4e-31, 39% id in 282 aa, and to Haemophilus influenzae hypothetical protein Hi0223 SWALL:Y223_HAEIN (SWALL:P44579) (300 aa) fasta scores: E(): 2.9e-30, 33.9% id in 292 aa; hypothetical protein 2927301 3097034 BPSS2163 Burkholderia pseudomallei K96243 hypothetical protein YP_112164.1 2926408 R 272560 CDS YP_112165.1 53723180 3095820 complement(2927298..2927594) 1 NC_006351.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 2927594 3095820 BPSS2164 Burkholderia pseudomallei K96243 acylphosphatase YP_112165.1 2927298 R 272560 CDS YP_112166.1 53723181 3095821 2927755..2928762 1 NC_006351.1 Similar to Zymomonas mobilis HpnA protein SWALL:O34285 (EMBL:AJ001401) (337 aa) fasta scores: E(): 1.2e-74, 64.41% id in 326 aa, and to Synechocystis sp. dihydroflavonol-4-reductase slr1706 SWALL:DFRA_SYNY3 (SWALL:P73212) (343 aa) fasta scores: E(): 6.6e-42, 43.11% id in 334 aa; hypothetical protein 2928762 3095821 BPSS2165 Burkholderia pseudomallei K96243 hypothetical protein YP_112166.1 2927755 D 272560 CDS YP_112167.1 53723182 3095943 2929017..2930585 1 NC_006351.1 N-terminus is similar to the C-terminal region of Frankia sp. CpI1 hypothetical protein SWALL:Q9AEZ8 (EMBL:AY027524) (471 aa) fasta scores: E(): 2.7e-16, 42.3% id in 416 aa. CDS contains alanine rich region, residues 25 to 413; hypothetical protein 2930585 3095943 BPSS2166 Burkholderia pseudomallei K96243 hypothetical protein YP_112167.1 2929017 D 272560 CDS YP_112168.1 53723183 3095944 complement(2930811..2932001) 1 NC_006351.1 Similar to Synechocystis sp. hypothetical protein slr1566 SWALL:P74597 (EMBL:D90916) (395 aa) fasta scores: E(): 2.2e-66, 48.49% id in 398 aa, and to Anabaena sp. hypothetical protein alr0776 SWALL:Q8YYS0 (EMBL:AP003583) (396 aa) fasta scores: E(): 1.2e-55, 49.74% id in 396 aa; glycosyl transferase 2932001 3095944 BPSS2167 Burkholderia pseudomallei K96243 glycosyl transferase YP_112168.1 2930811 R 272560 CDS YP_112169.1 53723184 3095062 2932395..2933336 1 NC_006351.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2933336 ispH 3095062 ispH Burkholderia pseudomallei K96243 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_112169.1 2932395 D 272560 CDS YP_112170.1 53723185 3095559 2933349..2934509 1 NC_006351.1 Similar to Anabaena sp. hypothetical protein alr4269 SWALL:Q8YPC9 (EMBL:AP003595) (338 aa) fasta scores: E(): 2.6e-79, 56.17% id in 324 aa, and to Streptomyces coelicolor hypothetical protein SCO6766 or SC6A5.15 SWALL:Q9X7W1 (EMBL:AL939129) (340 aa) fasta scores: E(): 1.1e-73, 50.29% id in 340 aa. CDS is extended at the C-terminus in comparison to orthologues; MoaA/NifB/PqqE family protein 2934509 3095559 BPSS2169 Burkholderia pseudomallei K96243 MoaA/NifB/PqqE family protein YP_112170.1 2933349 D 272560 CDS YP_112171.1 53723186 3095750 2934853..2935206 1 NC_006351.1 Similar to Anabaena sp. hypothetical protein alr0056 SWALL:Q8Z0N5 (EMBL:AP003581) (120 aa) fasta scores: E(): 1.1e-21, 52.33% id in 107 aa, and to Rhizobium loti hypothetical protein mll2280 SWALL:Q98IR7 (EMBL:AP002999) (137 aa) fasta scores: E(): 2.7e-14, 41.96% id in 112 aa; hypothetical protein 2935206 3095750 BPSS2170 Burkholderia pseudomallei K96243 hypothetical protein YP_112171.1 2934853 D 272560 CDS YP_112172.1 53723187 3095751 2935765..2937123 1 NC_006351.1 catalyzes the formation of 5-aminovulinate from (S)-4-amino-5-oxopentanoate; aminotransferase 2937123 3095751 BPSS2171 Burkholderia pseudomallei K96243 aminotransferase YP_112172.1 2935765 D 272560 CDS YP_112173.1 53723188 3095818 2937924..2938391 1 NC_006351.1 hypothetical protein 2938391 3095818 BPSS2172 Burkholderia pseudomallei K96243 hypothetical protein YP_112173.1 2937924 D 272560 CDS YP_112174.1 53723189 3095819 complement(2938659..2938865) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein RSC0023 SWALL:Q8Y3F7 (EMBL:AL646057) (64 aa) fasta scores: E(): 1.3e-16, 72.13% id in 61 aa, and to Pseudomonas putida hypothetical protein SWALL:Q88E28 (EMBL:AE016791) (65 aa) fasta scores: E(): 9.7e-17, 68.11% id in 69 aa; hypothetical protein 2938865 3095819 BPSS2172a Burkholderia pseudomallei K96243 hypothetical protein YP_112174.1 2938659 R 272560 CDS YP_112175.1 53723190 3096607 complement(2938877..2940955) 1 NC_006351.1 Similar to Escherichia coli carbon starvation protein A CstA SWALL:CSTA_ECOLI (SWALL:P15078) (701 aa) fasta scores: E(): 1.2e-186, 69.8% id in 702 aa, and to Ralstonia solanacearum probable carbon starvation A transmembrane protein rsc0022 or rs01844 SWALL:Q8Y3F8 (EMBL:AL646057) (686 aa) fasta scores: E(): 1e-208, 79.32% id in 682 aa; carbon starvation protein A 2940955 cstA 3096607 cstA Burkholderia pseudomallei K96243 carbon starvation protein A YP_112175.1 2938877 R 272560 CDS YP_112176.1 53723191 3097237 complement(2941198..2941707) 1 NC_006351.1 Similar to Methylococcus capsulatus cytochrome P460 Cyp SWALL:O87646 (EMBL:AF091435) (161 aa) fasta scores: E(): 8.9e-17, 44.17% id in 163 aa; cytochrome P460 2941707 3097237 BPSS2174 Burkholderia pseudomallei K96243 cytochrome P460 YP_112176.1 2941198 R 272560 CDS YP_112177.1 53723192 3096096 complement(2941725..2942777) 1 NC_006351.1 Similar to Rhizobium meliloti epoxide hydrolase rb0209 or smb20216 SWALL:Q92WW8 (EMBL:AL603642) (348 aa) fasta scores: E(): 8.5e-91, 66.76% id in 352 aa, and to Rhizobium loti epoxide hydrolase mlr3288 SWALL:Q98GK2 (EMBL:AP003001) (341 aa) fasta scores: E(): 6.3e-84, 64.24% id in 344 aa; hydrolase 2942777 3096096 BPSS2175 Burkholderia pseudomallei K96243 hydrolase YP_112177.1 2941725 R 272560 CDS YP_112178.1 53723193 3096097 complement(2943116..2944624) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp1573 or rs02129 SWALL:Q8XPR5 (EMBL:AL646085) (494 aa) fasta scores: E(): 1.1e-113, 61.69% id in 496 aa, and to Rhizobium loti hypothetical protein mlr6294 SWALL:Q989S9 (EMBL:AP003008) (525 aa) fasta scores: E(): 6e-73, 43.81% id in 493 aa; hypothetical protein 2944624 3096097 BPSS2176 Burkholderia pseudomallei K96243 hypothetical protein YP_112178.1 2943116 R 272560 CDS YP_112179.1 53723194 3097125 2944785..2945741 1 NC_006351.1 Similar to Ralstonia solanacearum probable transcriptional regulator protein rsp1571 or rs02127 SWALL:Q8XPR7 (EMBL:AL646085) (324 aa) fasta scores: E(): 1.5e-43, 40.82% id in 316 aa, and to Escherichia coli cyn operon transcriptional activator CynR or b0338 SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 5.9e-14, 26.12% id in 310 aa; LysR family transcriptional regulator 2945741 3097125 BPSS2177 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_112179.1 2944785 D 272560 CDS YP_112180.1 53723195 3097126 complement(2946195..2946584) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp1249 or rs03193 SWALL:Q8XQH6 (EMBL:AL646083) (127 aa) fasta scores: E(): 1.8e-37, 69.29% id in 127 aa, and to Anabaena sp. hypothetical protein all3014 SWALL:Q8YSS0 (EMBL:AP003591) (120 aa) fasta scores: E(): 4.2e-17, 48.33% id in 120 aa; hypothetical protein 2946584 3097126 BPSS2178 Burkholderia pseudomallei K96243 hypothetical protein YP_112180.1 2946195 R 272560 CDS YP_112181.1 53723196 3096173 2946843..2947295 1 NC_006351.1 hypothetical protein 2947295 3096173 BPSS2179 Burkholderia pseudomallei K96243 hypothetical protein YP_112181.1 2946843 D 272560 CDS YP_112182.1 53723197 3097139 complement(2947351..2947713) 1 NC_006351.1 hypothetical protein 2947713 3097139 BPSS2180 Burkholderia pseudomallei K96243 hypothetical protein YP_112182.1 2947351 R 272560 CDS YP_112183.1 53723198 3097140 complement(2947734..2948480) 1 NC_006351.1 Similar to Caulobacter crescentus hypothetical protein cc2891 SWALL:Q9A4E3 (EMBL:AE005953) (241 aa) fasta scores: E(): 8.7e-45, 48.73% id in 238 aa; hypothetical protein 2948480 3097140 BPSS2181 Burkholderia pseudomallei K96243 hypothetical protein YP_112183.1 2947734 R 272560 CDS YP_112184.1 53723199 3097121 complement(2948508..2949569) 1 NC_006351.1 Similar to Bacteriophage P22 bactoprenol glucosyl transferase GtrB SWALL:GTRB_BPP22 (SWALL:P57022) (310 aa) fasta scores: E(): 2.1e-62, 54.45% id in 303 aa, and to Bacteriophage SFX bactoprenol glucosyl transferase GtrB SWALL:GTRB_BPSFX (SWALL:Q9T1D6) (305 aa) fasta scores: E(): 3.7e-61, 54.45% id in 303 aa. CDS is extended at the C-terminus in comparison to orthologues; glycosyl transferase 2949569 3097121 BPSS2182 Burkholderia pseudomallei K96243 glycosyl transferase YP_112184.1 2948508 R 272560 CDS YP_112185.1 53723200 3097122 complement(2949554..2950978) 1 NC_006351.1 Similar to Chlorobium tepidum hypothetical protein ct0439 SWALL:AAM71684 (EMBL:AE012821) (454 aa) fasta scores: E(): 7.1e-38, 35.04% id in 408 aa, and to Chlorobium tepidum hypothetical protein ct0441 SWALL:AAM71686 (EMBL:AE012821) (317 aa) fasta scores: E(): 2.3e-26, 37.3% id in 319 aa. Possible alternative translational start site. CDS is extended at the C-terminus in comparison to some similar proteins; hypothetical protein 2950978 3097122 BPSS2183 Burkholderia pseudomallei K96243 hypothetical protein YP_112185.1 2949554 R 272560 CDS YP_112186.1 53723201 3096294 complement(2950975..2952216) 1 NC_006351.1 Similar to Chlorobium tepidum hypothetical protein ct0440 SWALL:AAM71685 (EMBL:AE012821) (406 aa) fasta scores: E(): 9.8e-35, 36.72% id in 403 aa, and to Chlorobium tepidum hypothetical protein ct0439 SWALL:AAM71684 (EMBL:AE012821) (454 aa) fasta scores: E(): 1.9e-34, 36.22% id in 403 aa. Possible alternative translational start site after codon 11; hypothetical protein 2952216 3096294 BPSS2184 Burkholderia pseudomallei K96243 hypothetical protein YP_112186.1 2950975 R 272560 CDS YP_112187.1 53723202 3097271 2953340..2953510 1 NC_006351.1 Similar to Caulobacter crescentus pilus subunit protein PilA or cc2948 SWALL:Q9L720 (EMBL:AF229646) (59 aa) fasta scores: E(): 9.7e-08, 54% id in 50 aa, and to Ralstonia solanacearum pilin protein rsp1092 or rs02598 SWALL:Q8XQX6 (EMBL:AL646082) (58 aa) fasta scores: E(): 7.6e-06, 53.33% id in 45 aa. Note: Also similar to BPSS2186 (73 aa) fasta scores: E(): 3.3e-10, 70.213% identity in 47 aa overlap; pilus subunit protein 2953510 3097271 BPSS2185 Burkholderia pseudomallei K96243 pilus subunit protein YP_112187.1 2953340 D 272560 CDS YP_112188.1 53723203 3097272 2953617..2953835 1 NC_006351.1 Similar to Caulobacter crescentus pilus subunit protein PilA or cc2948 SWALL:Q9L720 (EMBL:AF229646) (59 aa) fasta scores: E(): 5.1e-05, 51.06% id in 47 aa. Note: Also similar to BPSS2185 (57 aa) fasta scores: E(): 4.7e-09, 70.213% identity in 47 aa overlap. CDS is extended at the N-terminus in comparison to orthologues; pilus subunit protein 2953835 3097272 BPSS2186 Burkholderia pseudomallei K96243 pilus subunit protein YP_112188.1 2953617 D 272560 CDS YP_112189.1 53723204 3096337 2953927..2954466 1 NC_006351.1 Similar to Ralstonia solanacearum probable prepilin peptidase transmembrane protein CpaA1 or rsc0657 or rs01561 SWALL:Q8Y1N3 (EMBL:AL646060) (172 aa) fasta scores: E(): 1.2e-20, 48.21% id in 168 aa, and to Burkholderia pseudomallei type 4 prepilin-like proteins leader peptide processing enzyme SWALL:LEP4_BURPS (SWALL:Q9ZF70) (275 aa) fasta scores: E(): 0.004, 35.5% id in 138 aa; pilus assembly-related outer membrane protein 2954466 3096337 BPSS2187 Burkholderia pseudomallei K96243 pilus assembly-related outer membrane protein YP_112189.1 2953927 D 272560 CDS YP_112190.1 53723205 3096338 2954506..2955888 1 NC_006351.1 Similar to Methanopyrus kandleri predicted AAA+ class ATPase with chaperone activity mk0708 SWALL:Q8TXG6 (EMBL:AE010363) (585 aa) fasta scores: E(): 3.4e-25, 33.03% id in 333 aa, and to Methanobacterium thermoautotrophicum conserved protein mth616 SWALL:O26713 (EMBL:AE000843) (442 aa) fasta scores: E(): 6.9e-22, 28.5% id in 407 aa; hypothetical protein 2955888 3096338 BPSS2188 Burkholderia pseudomallei K96243 hypothetical protein YP_112190.1 2954506 D 272560 CDS YP_112191.1 53723206 3096554 2955934..2956779 1 NC_006351.1 Similar to Ralstonia solanacearum probable pilus assembly transmembrane protein CpaB or rsc0656 or rs01560 SWALL:Q8Y1N4 (EMBL:AL646060) (288 aa) fasta scores: E(): 3.3e-33, 63.23% id in 291 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpC or atu0222 or agr_c_380 SWALL:Q8UIS0 (EMBL:AE008995) (268 aa) fasta scores: E(): 1.2e-09, 30.58% id in 255 aa; pilus assembly-related, exported protein 2956779 3096554 BPSS2189 Burkholderia pseudomallei K96243 pilus assembly-related, exported protein YP_112191.1 2955934 D 272560 CDS YP_112192.1 53723207 3096073 2956893..2958965 1 NC_006351.1 Similar to Ralstonia solanacearum probable outer membrane channel protein CpaC or rsc0655 or rs01559 SWALL:Q8Y1N5 (EMBL:AL646060) (634 aa) fasta scores: E(): 6.2e-45, 54.45% id in 617 aa, and to Caulobacter crescentus PilQ (pilus assembly protein CpaC) or cc2945 SWALL:Q9L717 (EMBL:AF229646) (560 aa) fasta scores: E(): 1.3e-10, 30.64% id in 558 aa; hypothetical protein 2958965 3096073 BPSS2190 Burkholderia pseudomallei K96243 hypothetical protein YP_112192.1 2956893 D 272560 CDS YP_112193.1 53723208 3096074 2958987..2959292 1 NC_006351.1 Similar to Ralstonia solanacearum probable lipoprotein rsc0654 or rs01558 SWALL:Q8Y1N6 (EMBL:AL646060) (102 aa) fasta scores: E(): 4.3e-11, 46.59% id in 88 aa; lipoprotein 2959292 3096074 BPSS2191 Burkholderia pseudomallei K96243 lipoprotein YP_112193.1 2958987 D 272560 CDS YP_112194.1 53723209 3096421 2959383..2960573 1 NC_006351.1 hypothetical protein 2960573 3096421 BPSS2192 Burkholderia pseudomallei K96243 hypothetical protein YP_112194.1 2959383 D 272560 CDS YP_112195.1 53723210 3096422 2960597..2961139 1 NC_006351.1 hypothetical protein 2961139 3096422 BPSS2193 Burkholderia pseudomallei K96243 hypothetical protein YP_112195.1 2960597 D 272560 CDS YP_112196.1 53723211 3096437 2961136..2961597 1 NC_006351.1 hypothetical protein 2961597 3096437 BPSS2194 Burkholderia pseudomallei K96243 hypothetical protein YP_112196.1 2961136 D 272560 CDS YP_112197.1 53723212 3096666 2961620..2962828 1 NC_006351.1 Similar to Ralstonia solanacearum pilus assembly protein CpaE1 or rsc0653 or rs01557 SWALL:Q8Y1N7 (EMBL:AL646060) (397 aa) fasta scores: E(): 1.8e-49, 39.59% id in 394 aa, and to Caulobacter crescentus CpaE SWALL:Q9L715 (EMBL:AF229646) (517 aa) fasta scores: E(): 6.4e-14, 29.53% id in 369 aa; pilus assembly-related protein 2962828 3096666 BPSS2195 Burkholderia pseudomallei K96243 pilus assembly-related protein YP_112197.1 2961620 D 272560 CDS YP_112198.1 53723213 3096667 2962850..2964217 1 NC_006351.1 Similar to Chlorobium tepidum type II secretion system protein ct0434 SWALL:AAM71680 (EMBL:AE012821) (480 aa) fasta scores: E(): 1.1e-92, 60.33% id in 416 aa, and to Agrobacterium tumefaciens component of type IV pilus CtpG or atu0218 or agr_c_373 SWALL:Q8UIS4 (EMBL:AE008995) (491 aa) fasta scores: E(): 4e-73, 48.49% id in 431 aa; type II/IV secretion system-related protein 2964217 3096667 BPSS2196 Burkholderia pseudomallei K96243 type II/IV secretion system-related protein YP_112198.1 2962850 D 272560 CDS YP_112199.1 53723214 3095763 2964244..2965221 1 NC_006351.1 Similar to Ralstonia solanacearum tight adherence TadB-related transmembrane protein rsc0651 or rs01555 SWALL:Q8Y1N9 (EMBL:AL646060) (325 aa) fasta scores: E(): 6.1e-57, 46.34% id in 328 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpH or atu0217 or agr_c_372 SWALL:Q8UIS5 (EMBL:AE008995) (334 aa) fasta scores: E(): 1.9e-21, 28.35% id in 335 aa; hypothetical protein 2965221 3095763 BPSS2197 Burkholderia pseudomallei K96243 hypothetical protein YP_112199.1 2964244 D 272560 CDS YP_112200.1 53723215 3095764 2965276..2966235 1 NC_006351.1 Similar to Ralstonia solanacearum tight adherence TadC-related transmembrane protein rsc0650 or rs01554 SWALL:Q8Y1P0 (EMBL:AL646060) (315 aa) fasta scores: E(): 2.5e-53, 50.48% id in 311 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpI or atu0216 or agr_c_371 SWALL:Q8UIS6 (EMBL:AE008995) (328 aa) fasta scores: E(): 4.2e-23, 31.56% id in 320 aa; hypothetical protein 2966235 3095764 BPSS2198 Burkholderia pseudomallei K96243 hypothetical protein YP_112200.1 2965276 D 272560 CDS YP_112201.1 53723216 3096567 complement(2966659..2967135) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2082 SWALL:Q9I233 (EMBL:AE004636) (158 aa) fasta scores: E(): 3.2e-34, 56.12% id in 155 aa, and to Bacillus subtilis transcriptional regulator AzlB SWALL:AZLB_BACSU (SWALL:O07920) (157 aa) fasta scores: E(): 2.2e-15, 34.45% id in 148 aa. Note: Also similar to BPSL0849 (168 aa) fasta scores: E(): 3.2e-29, 52.500% identity in 160 aa overlap; transcription regulator AsnC 2967135 3096567 BPSS2199 Burkholderia pseudomallei K96243 transcription regulator AsnC YP_112201.1 2966659 R 272560 CDS YP_112202.1 53723217 3096804 2967370..2968587 1 NC_006351.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2968587 tyrB2 3096804 tyrB2 Burkholderia pseudomallei K96243 aromatic amino acid aminotransferase YP_112202.1 2967370 D 272560 CDS YP_112203.1 53723218 3096574 2968811..2969203 1 NC_006351.1 Similar to Rhizobium meliloti translation initiation inhibitor protein rb0363 or smb20377 SWALL:Q92WH6 (EMBL:AL603643) (127 aa) fasta scores: E(): 1.1e-11, 40.32% id in 124 aa, to Xanthomonas axonopodis translation initiation inhibitor xac3392 SWALL:AAM38235 (EMBL:AE011985) (126 aa) fasta scores: E(): 4.9e-08, 36.03% id in 111 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri TdcF protein or b3113 or c3871 or sf3153 SWALL:TDCF_ECOLI (SWALL:P42631) (129 aa) fasta scores: E(): 7.8e-06, 33.91% id in 115 aa; hypothetical protein 2969203 3096574 BPSS2201 Burkholderia pseudomallei K96243 hypothetical protein YP_112203.1 2968811 D 272560 CDS YP_112204.1 53723219 3096575 2969371..2970444 1 NC_006351.1 Similar to Ralstonia solanacearum probable porin signal peptide protein rsc2108 or rs01496 SWALL:Q8XXK5 (EMBL:AL646068) (381 aa) fasta scores: E(): 2.3e-16, 31.94% id in 385 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 8.5e-11, 30.78% id in 393 aa; porin related, membrane protein 2970444 3096575 BPSS2202 Burkholderia pseudomallei K96243 porin related, membrane protein YP_112204.1 2969371 D 272560 CDS YP_112205.1 53723220 3096698 2970524..2971954 1 NC_006351.1 Similar to Bacillus subtilis amino-acid permease RocC or ipa-78D SWALL:ROCC_BACSU (SWALL:P39636) (470 aa) fasta scores: E(): 2.4e-57, 37.3% id in 453 aa, and to Escherichia coli probable S-methylmethionine permease MmuP or b0260 SWALL:MMUP_ECOLI (SWALL:Q47689) (467 aa) fasta scores: E(): 8.4e-57, 37.69% id in 451 aa; amino acid transport, membrane protein 2971954 3096698 BPSS2203 Burkholderia pseudomallei K96243 amino acid transport, membrane protein YP_112205.1 2970524 D 272560 CDS YP_112206.1 53723221 3096699 complement(2972031..2972798) 1 NC_006351.1 Similar to Rhizobium meliloti transcriptional regulator, GntR family protein rb1031 or smb21591 SWALL:Q92UR2 (EMBL:AL603645) (244 aa) fasta scores: E(): 5.6e-15, 34.66% id in 225 aa, and to Escherichia coli galactonate operon transcriptional repressor DgoR or b3694/b3695 SWALL:DGOR_ECOLI (SWALL:P31460) (229 aa) fasta scores: E(): 2.2e-07, 25.11% id in 219 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; GntR family transcriptional regulator 2972798 3096699 BPSS2204 Burkholderia pseudomallei K96243 GntR family transcriptional regulator YP_112206.1 2972031 R 272560 CDS YP_112207.1 53723222 3096863 complement(2973292..2974830) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsp1573 or rs02129 SWALL:Q8XPR5 (EMBL:AL646085) (494 aa) fasta scores: E(): 1.5e-114, 60.8% id in 495 aa, and to Brucella melitensis hypothetical cytosolic protein bmeii0539 SWALL:Q8YCI9 (EMBL:AE009689) (489 aa) fasta scores: E(): 1.9e-34, 30.2% id in 500 aa; hypothetical protein 2974830 3096863 BPSS2205 Burkholderia pseudomallei K96243 hypothetical protein YP_112207.1 2973292 R 272560 CDS YP_112208.1 53723223 3096733 complement(2974827..2976134) 1 NC_006351.1 Similar to the plasmid-borne Agrobacterium vitis tartrate transporter TtuB SWALL:TUB3_AGRVI (SWALL:P70786) (449 aa) fasta scores: E(): 3.9e-69, 43.63% id in 424 aa, and to Pseudomonas putida phthalate transporter Pht1 SWALL:PHT1_PSEPU (SWALL:Q05181) (451 aa) fasta scores: E(): 1.5e-62, 41.45% id in 427 aa; transport related, membrane protein 2976134 3096733 BPSS2206 Burkholderia pseudomallei K96243 transport related, membrane protein YP_112208.1 2974827 R 272560 CDS YP_112209.1 53723224 3096734 2976263..2977177 1 NC_006351.1 Similar to Ralstonia solanacearum probable transcriptional regulator protein rsp1571 or rs02127 SWALL:Q8XPR7 (EMBL:AL646085) (324 aa) fasta scores: E(): 4e-38, 37.17% id in 304 aa, and to Pseudomonas sp. transcriptional regulator ORF99 SWALL:Q936X4 (EMBL:U66917) (322 aa) fasta scores: E(): 4.8e-19, 34.25% id in 289 aa; LysR family transcriptional regulator 2977177 3096734 BPSS2207 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_112209.1 2976263 D 272560 CDS YP_112210.1 53723225 3096868 complement(2977466..2979592) 1 NC_006351.1 hypothetical protein 2979592 3096868 BPSS2208 Burkholderia pseudomallei K96243 hypothetical protein YP_112210.1 2977466 R 272560 CDS YP_112211.1 53723226 3096869 2980527..2980904 1 NC_006351.1 hypothetical protein 2980904 3096869 BPSS2209 Burkholderia pseudomallei K96243 hypothetical protein YP_112211.1 2980527 D 272560 CDS YP_112212.1 53723227 3096483 2980951..2982270 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable transporter pa2135 SWALL:Q9I1Y0 (EMBL:AE004641) (454 aa) fasta scores: E(): 1.6e-32, 39.95% id in 463 aa, and to Methanosarcina mazei Na(+)/H(+) antiporter mm1891 SWALL:AAM31587 (EMBL:AE013425) (437 aa) fasta scores: E(): 5.1e-05, 29.97% id in 447 aa, and to Escherichia coli Na(+)/H(+) exchanger YjcE or b4065 SWALL:YJCE_ECOLI (SWALL:P32703) (549 aa) fasta scores: E(): 0.00014, 29.67% id in 273 aa; cation transport-like protein 2982270 3096483 BPSS2210 Burkholderia pseudomallei K96243 cation transport-like protein YP_112212.1 2980951 D 272560 CDS YP_112213.1 53723228 3096301 complement(2982849..2986328) 1 NC_006351.1 Similar to Pseudomonas aeruginosa probable ATP-dependent DNA ligase pa2138 SWALL:Q9I1X7 (EMBL:AE004641) (840 aa) fasta scores: E(): 3.9e-54, 42.03% id in 1123 aa, and to Xanthomonas campestris ATP-dependent DNA ligase xcc0105 SWALL:Q8PE76 (EMBL:AE012104) (1001 aa) fasta scores: E(): 4.3e-34, 35.13% id in 1147 aa. Note: There are some fragments in this CDS that present no similarities to any of the database matches; ATP-dependent DNA ligase 2986328 3096301 BPSS2211 Burkholderia pseudomallei K96243 ATP-dependent DNA ligase YP_112213.1 2982849 R 272560 CDS YP_112214.1 53723229 3096302 complement(2986398..2987504) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2150 SWALL:Q9I1W5 (EMBL:AE004642) (293 aa) fasta scores: E(): 1.6e-40, 48.67% id in 302 aa, and to Xanthomonas campestris hypothetical protein xcc0104 SWALL:AAM39423 (EMBL:AE012104) (313 aa) fasta scores: E(): 3.3e-29, 39.2% id in 278 aa. Note: This CDS is longer in its C-terminal region than most of its database matches; hypothetical protein 2987504 3096302 BPSS2212 Burkholderia pseudomallei K96243 hypothetical protein YP_112214.1 2986398 R 272560 CDS YP_112215.1 53723230 3096538 complement(2987586..2988089) 1 NC_006351.1 Similar to Rhizobium meliloti hypothetical membrane-anchored protein rb0938 or smb21362 SWALL:Q92UZ6 (EMBL:AL603645) (146 aa) fasta scores: E(): 1.4e-07, 30.07% id in 143 aa, and to Bacillus halodurans hypothetical protein bh1232 SWALL:Q9KDI1 (EMBL:AP001511) (218 aa) fasta scores: E(): 1.4e-07, 29.73% id in 148 aa; hypothetical protein 2988089 3096538 BPSS2213 Burkholderia pseudomallei K96243 hypothetical protein YP_112215.1 2987586 R 272560 CDS YP_112216.1 53723231 3095084 complement(2988112..2990238) 1 NC_006351.1 Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; hydroperoxidase II 2990238 katE 3095084 katE Burkholderia pseudomallei K96243 hydroperoxidase II YP_112216.1 2988112 R 272560 CDS YP_112217.1 53723232 3096539 complement(2990374..2990805) 1 NC_006351.1 hypothetical protein 2990805 3096539 BPSS2215 Burkholderia pseudomallei K96243 hypothetical protein YP_112217.1 2990374 R 272560 CDS YP_112218.1 53723233 3096712 complement(2990840..2991049) 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane protein RS02225 SWALL:Q8XPH4 (EMBL:AL646086) (72 aa) fasta scores: E(): 2.1e-11, 74.13% id in 58 aa, and to Bordetella pertussis membrane protein SWALL:Q7VXL6 (EMBL:BX640416) (53 aa) fasta scores: E(): 4.3e-10, 69.81% id in 53 aa. Possible alternative translational start site after codon 16; hypothetical protein 2991049 3096712 BPSS2216 Burkholderia pseudomallei K96243 hypothetical protein YP_112218.1 2990840 R 272560 CDS YP_112219.1 53723234 3095938 complement(2991046..2991234) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein msr0042 SWALL:Q98NP7 (EMBL:AP002994) (62 aa) fasta scores: E(): 5.3e-11, 68.85% id in 61 aa, and to Brucella melitensis hypothetical cytosolic protein bmei1136 SWALL:Q8YGM2 (EMBL:AE009553) (65 aa) fasta scores: E(): 2.7e-10, 68.33% id in 60 aa; hypothetical protein 2991234 3095938 BPSS2217 Burkholderia pseudomallei K96243 hypothetical protein YP_112219.1 2991046 R 272560 CDS YP_112220.1 53723235 3095887 complement(2991302..2992777) 1 NC_006351.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 2992777 rpoN 3095887 rpoN Burkholderia pseudomallei K96243 RNA polymerase factor sigma-54 YP_112220.1 2991302 R 272560 CDS YP_112221.1 53723236 3095939 2993473..2994231 1 NC_006351.1 lipoprotein 2994231 3095939 BPSS2219 Burkholderia pseudomallei K96243 lipoprotein YP_112221.1 2993473 D 272560 CDS YP_112222.1 53723237 3096040 2994290..2995033 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2185 SWALL:Q9I1T0 (EMBL:AE004645) (294 aa) fasta scores: E(): 3.2e-48, 56.31% id in 293 aa, and to Salmonella typhi hypothetical protein sty1320 SWALL:Q8Z7E1 (EMBL:AL627269) (292 aa) fasta scores: E(): 4e-46, 53.4% id in 294 aa. Note: This CDS seems to lack a fragment of approx 50 residues at residue 37; hypothetical protein 2995033 3096040 BPSS2220 Burkholderia pseudomallei K96243 hypothetical protein YP_112222.1 2994290 D 272560 CDS YP_112223.1 53723238 3096041 complement(2995345..2995854) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2184 SWALL:Q9I1T1 (EMBL:AE004645) (169 aa) fasta scores: E(): 2.5e-34, 59.76% id in 169 aa, and to Escherichia coli protein YciE or b1257 SWALL:YCIE_ECOLI (SWALL:P21363) (168 aa) fasta scores: E(): 4.7e-25, 49.39% id in 164 aa; hypothetical protein 2995854 3096041 BPSS2221 Burkholderia pseudomallei K96243 hypothetical protein YP_112223.1 2995345 R 272560 CDS YP_112224.1 53723239 3096769 complement(2996319..2996996) 1 NC_006351.1 C-terminal region is similar to Ralstonia solanacearum hypothetical protein ssp0486 or rs00364 SWALL:Q8XSI8 (EMBL:AL646078) (148 aa) fasta scores: E(): 7.6e-11, 42.3% id in 130 aa; hypothetical protein 2996996 3096769 BPSS2222 Burkholderia pseudomallei K96243 hypothetical protein YP_112224.1 2996319 R 272560 CDS YP_112225.1 53723240 3095997 complement(2997308..2998165) 1 NC_006351.1 Similar to Agrobacterium tumefaciens agr_c_1796 SWALL:Q8U5G0 (EMBL:AE008028) (286 aa) fasta scores: E(): 4.9e-20, 29.56% id in 274 aa, and to Rhizobium loti hypothetical protein mlr1332 SWALL:Q98KT3 (EMBL:AP002997) (289 aa) fasta scores: E(): 4.7e-18, 29.83% id in 238 aa; hypothetical protein 2998165 3095997 BPSS2223 Burkholderia pseudomallei K96243 hypothetical protein YP_112225.1 2997308 R 272560 CDS YP_112226.1 53723241 3095998 complement(2998583..2998879) 1 NC_006351.1 lipoprotein 2998879 3095998 BPSS2224 Burkholderia pseudomallei K96243 lipoprotein YP_112226.1 2998583 R 272560 CDS YP_112227.1 53723242 3096730 complement(2998916..2999272) 1 NC_006351.1 hypothetical protein 2999272 3096730 BPSS2225 Burkholderia pseudomallei K96243 hypothetical protein YP_112227.1 2998916 R 272560 CDS YP_112228.1 53723243 3096731 complement(3001052..3001351) 1 NC_006351.1 hypothetical protein 3001351 3096731 BPSS2226 Burkholderia pseudomallei K96243 hypothetical protein YP_112228.1 3001052 R 272560 CDS YP_112229.1 53723244 3096784 3001644..3001892 1 NC_006351.1 Similar to the C-terminal region of Ralstonia solanacearum hypothetical protein rsp1523 or rs04800 SWALL:Q8XPW3 (EMBL:AL646085) (91 aa) fasta scores: E(): 0.5, 37.87% id in 66 aa, and of Mycobacterium tuberculosis hypothetical protein mt3313 SWALL:Q8VJ47 (EMBL:AE007143) (150 aa) fasta scores: E(): 3.2, 29.41% id in 68 aa. Similar to Rhizobium loti hypothetical protein Msl3106 msl3106 SWALL:Q98GZ3 (EMBL:AP003001) (86 aa) fasta scores: E(): 3.4, 32.85% id in 70 aa. Possible gene remanat; hypothetical protein 3001892 3096784 BPSS2227 Burkholderia pseudomallei K96243 hypothetical protein YP_112229.1 3001644 D 272560 CDS YP_112230.1 53723245 3096561 3002044..3002223 1 NC_006351.1 N-terminus is weakly similar to the C-terminal region of Rhizobium loti hypothetical protein msl3425 SWALL:Q98GA0 (EMBL:AP003002) (51 aa) fasta scores: E(): 0.37, 36.95% id in 46 aa; hypothetical protein 3002223 3096561 BPSS2227A Burkholderia pseudomallei K96243 hypothetical protein YP_112230.1 3002044 D 272560 CDS YP_112231.1 53723246 3096562 complement(3002627..3003271) 1 NC_006351.1 hypothetical protein 3003271 3096562 BPSS2228 Burkholderia pseudomallei K96243 hypothetical protein YP_112231.1 3002627 R 272560 CDS YP_112232.1 53723247 3096589 3003879..3004310 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2159 SWALL:Q9I1V6 (EMBL:AE004642) (138 aa) fasta scores: E(): 1.5e-21, 50.36% id in 137 aa, and to Bacillus halodurans hypothetical protein bh2605 SWALL:Q9K9P0 (EMBL:AP001516) (142 aa) fasta scores: E(): 1.2e-14, 37.85% id in 140 aa; hypothetical protein 3004310 3096589 BPSS2229 Burkholderia pseudomallei K96243 hypothetical protein YP_112232.1 3003879 D 272560 CDS YP_112233.1 53723248 3096590 3004456..3004947 1 NC_006351.1 Similar to Methanosarcina mazei hypothetical protein mm1793 SWALL:AAM31489 (EMBL:AE013416) (135 aa) fasta scores: E(): 1.3e-21, 49.6% id in 125 aa, and to Agrobacterium tumefaciens agr_c_723 SWALL:Q8U5M3 (EMBL:AE007978) (142 aa) fasta scores: E(): 1.3e-12, 40.17% id in 117 aa; hypothetical protein 3004947 3096590 BPSS2230 Burkholderia pseudomallei K96243 hypothetical protein YP_112233.1 3004456 D 272560 CDS YP_112234.1 53723249 3096777 complement(3005164..3005613) 1 NC_006351.1 Partially similar to Brucella suis polar differentiation response regulator DivK or bra0612 SWALL:AAN33801 (EMBL:AE014558) (123 aa) fasta scores: E(): 1.8e-07, 27.58% id in 116 aa, and to Streptomyces coelicolor regulatory protein sco5351 or scbac5h2.20 SWALL:Q9ADB7 (EMBL:AL939123) (167 aa) fasta scores: E(): 3.7e-07, 36.36% id in 110 aa; response regulator 3005613 3096777 BPSS2231 Burkholderia pseudomallei K96243 response regulator YP_112234.1 3005164 R 272560 CDS YP_112235.1 53723250 3096825 3005722..3006078 1 NC_006351.1 hypothetical protein 3006078 3096825 BPSS2232 Burkholderia pseudomallei K96243 hypothetical protein YP_112235.1 3005722 D 272560 CDS YP_112236.1 53723251 3096826 3006090..3006746 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mll5147 SWALL:Q98CH6 (EMBL:AP003005) (223 aa) fasta scores: E(): 1.1e-28, 47.34% id in 188 aa, and to Zymomonas mobilis hypothetical protein SWALL:Q9RNL0 (EMBL:AF180145) (206 aa) fasta scores: E(): 6e-28, 43.14% id in 197 aa; DNA glycosylase 3006746 3096826 BPSS2233 Burkholderia pseudomallei K96243 DNA glycosylase YP_112236.1 3006090 D 272560 CDS YP_112237.1 53723252 3096809 3006825..3008279 1 NC_006351.1 Similar to Bradyrhizobium japonicum Blr6117 protein SWALL:BAC51382 (EMBL:AP005957) (450 aa) fasta scores: E(): 4.1e-64, 47.4% id in 405 aa, and to Ralstonia solanacearum probable manganese transport protein MntH or rsp0520 or rs00399 SWALL:MNTH_RALSO (SWALL:Q8XSF6) (442 aa) fasta scores: E(): 1.1e-11, 27.19% id in 445 aa; transport related, membrane protein 3008279 3096809 BPSS2234 Burkholderia pseudomallei K96243 transport related, membrane protein YP_112237.1 3006825 D 272560 CDS YP_112238.1 53723253 3096810 complement(3008389..3009564) 1 NC_006351.1 Similar to Methylobacter marinus glutathione-dependent formaldehyde dehydrogenase Fdh SWALL:FADH_METMR (SWALL:P47734) (424 aa) fasta scores: E(): 1.8e-78, 53.07% id in 390 aa, and to Pseudomonas putida glutathione-independent formaldehyde dehydrogenase FdhA SWALL:FADH_PSEPU (SWALL:P46154) (398 aa) fasta scores: E(): 4.7e-20, 32.5% id in 403 aa; Zinc-binding dehydrogenase 3009564 3096810 BPSS2235 Burkholderia pseudomallei K96243 Zinc-binding dehydrogenase YP_112238.1 3008389 R 272560 CDS YP_112239.1 53723254 3096474 complement(3010008..3010649) 1 NC_006351.1 hypothetical protein 3010649 3096474 BPSS2236 Burkholderia pseudomallei K96243 hypothetical protein YP_112239.1 3010008 R 272560 CDS YP_112240.1 53723255 3096844 complement(3010737..3011342) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2134 SWALL:Q9I1Y1 (EMBL:AE004641) (190 aa) fasta scores: E(): 3.5e-13, 44% id in 150 aa; hypothetical protein 3011342 3096844 BPSS2237 Burkholderia pseudomallei K96243 hypothetical protein YP_112240.1 3010737 R 272560 CDS YP_112241.1 53723256 3096845 complement(3011380..3012237) 1 NC_006351.1 Similar to Anabaena sp. oxidoreductase alr5182 SWALL:Q8YLW4 (EMBL:AP003599) (285 aa) fasta scores: E(): 3.4e-62, 60.28% id in 277 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase pa2142 SWALL:Q9I1X3 (EMBL:AE004641) (286 aa) fasta scores: E(): 3.5e-58, 57.34% id in 286 aa; short-chain dehydrogenase 3012237 3096845 BPSS2238 Burkholderia pseudomallei K96243 short-chain dehydrogenase YP_112241.1 3011380 R 272560 CDS YP_112242.1 53723257 3096680 complement(3012448..3013014) 1 NC_006351.1 hypothetical protein 3013014 3096680 BPSS2239 Burkholderia pseudomallei K96243 hypothetical protein YP_112242.1 3012448 R 272560 CDS YP_112243.1 53723258 3096681 complement(3013274..3013585) 1 NC_006351.1 C-terminal region similar to Anabaena sp. hypothetical protein Asl3383 asl3383 SWALL:Q8YRR0 (EMBL:AP003592) (65 aa) fasta scores: E(): 2.8e-06, 46.66% id in 60 aa, and to Methanosarcina mazei hypothetical protein mm0228 SWALL:AAM29924 (EMBL:AE013247) (62 aa) fasta scores: E(): 4.5e-05, 44.06% id in 59 aa; hypothetical protein 3013585 3096681 BPSS2240 Burkholderia pseudomallei K96243 hypothetical protein YP_112243.1 3013274 R 272560 CDS YP_112244.1 53723259 3096838 complement(3013740..3013949) 1 NC_006351.1 hypothetical protein 3013949 3096838 BPSS2241 Burkholderia pseudomallei K96243 hypothetical protein YP_112244.1 3013740 R 272560 CDS YP_112245.1 53723260 3096572 complement(3013956..3014771) 1 NC_006351.1 Similar to Xanthomonas campestris glucose 1-dehydrogenase homolog YxnA or xcc1992 SWALL:AAM41281 (EMBL:AE012304) (292 aa) fasta scores: E(): 6.3e-44, 51.15% id in 260 aa, and to Actinosynnema pretiosum glucose 1-dehydrogenase asm27 SWALL:AAM54105 (EMBL:AF453501) (341 aa) fasta scores: E(): 1e-33, 43.51% id in 262 aa, and to Bacillus subtilis hypothetical oxidoreductase YqjQ SWALL:YQJQ_BACSU (SWALL:P54554) (259 aa) fasta scores: E(): 4.7e-16, 31.43% id in 264 aa; short chain dehydrogenase 3014771 3096572 BPSS2242 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_112245.1 3013956 R 272560 CDS YP_112246.1 53723261 3096573 complement(3014799..3015290) 1 NC_006351.1 lipoprotein 3015290 3096573 BPSS2243 Burkholderia pseudomallei K96243 lipoprotein YP_112246.1 3014799 R 272560 CDS YP_112247.1 53723262 3096716 3015521..3016909 1 NC_006351.1 Similar to Nostoc punctiforme sucrose-phosphate synthase SpsA SWALL:Q937E5 (EMBL:AJ316587) (423 aa) fasta scores: E(): 1.1e-44, 36.34% id in 421 aa, and to Mycobacterium tuberculosis hypothetical protein rv0486 or mt0504 or mtcy20g9.12 SWALL:Y486_MYCTU (SWALL:Q11152) (480 aa) fasta scores: E(): 8.9e-24, 36.23% id in 425 aa; transferase 3016909 3096716 BPSS2244 Burkholderia pseudomallei K96243 transferase YP_112247.1 3015521 D 272560 CDS YP_112248.1 53723263 3096717 3016906..3017952 1 NC_006351.1 Similar to Pseudomonas aeruginosa similar to NAD dependent epimerase/dehydratase SWALL:AAM27842 (EMBL:AF498418) (318 aa) fasta scores: E(): 1.4e-87, 69.5% id in 305 aa, and to Synechocystis sp. dTDP-glucose 4-6-dehydratase RfbB or slr0809 SWALL:P74036 (EMBL:D90911) (328 aa) fasta scores: E(): 1.6e-73, 61.09% id in 311 aa; epimerase 3017952 3096717 BPSS2245 Burkholderia pseudomallei K96243 epimerase YP_112248.1 3016906 D 272560 CDS YP_112249.1 53723264 3095951 complement(3018081..3020396) 1 NC_006351.1 Similar to Anabaena sp. two-component hybrid sensor and regulator alr3442 SWALL:Q8YRK4 (EMBL:AP003593) (865 aa) fasta scores: E(): 1.3e-49, 30.58% id in 680 aa, and to Ralstonia solanacearum probable composite two-component regulatory rsp1676 or rs02235 SWALL:Q8XPG5 (EMBL:AL646086) (796 aa) fasta scores: E(): 1e-42, 32.65% id in 640 aa; sensor kinase/response regulator fusion protein 3020396 3095951 BPSS2246 Burkholderia pseudomallei K96243 sensor kinase/response regulator fusion protein YP_112249.1 3018081 R 272560 CDS YP_112250.1 53723265 3096427 3020531..3021223 1 NC_006351.1 hypothetical protein 3021223 3096427 BPSS2247 Burkholderia pseudomallei K96243 hypothetical protein YP_112250.1 3020531 D 272560 CDS YP_112251.1 53723266 3096428 3021241..3022149 1 NC_006351.1 Similar to Streptomyces coelicolor transferase sco6190 or sc2g5.11 SWALL:Q9Z5B2 (EMBL:AL939126) (298 aa) fasta scores: E(): 9.1e-54, 51.56% id in 287 aa, and to Clostridium acetobutylicum predicted glycosyltransferase cac2171 SWALL:Q97H42 (EMBL:AE007717) (299 aa) fasta scores: E(): 8.4e-09, 24.26% id in 239 aa; transferase 3022149 3096428 BPSS2248 Burkholderia pseudomallei K96243 transferase YP_112251.1 3021241 D 272560 CDS YP_112252.1 53723267 3095235 complement(3022173..3023543) 1 NC_006351.1 Similar to Ralstonia solanacearum probable sigma-54 interacting response regulator transcription regulator protein rsp1667 or rs02226 SWALL:Q8XPH3 (EMBL:AL646086) (491 aa) fasta scores: E(): 2.6e-102, 62.63% id in 455 aa, and to Escherichia coli acetoacetate metabolism regulatory protein AtoC or Az or b2220 SWALL:ATOC_ECOLI (SWALL:Q06065) (461 aa) fasta scores: E(): 7.5e-55, 39.52% id in 458 aa. Note: Also similar in its C-terminal region to the upstream CDS BPSS2250 (323 aa) fasta scores: E(): 7.7e-44, 47.352% identity in 321 aa overlap; Fis family transcriptional regulator 3023543 3095235 BPSS2249 Burkholderia pseudomallei K96243 Fis family transcriptional regulator YP_112252.1 3022173 R 272560 CDS YP_112253.1 53723268 3095236 3023932..3024900 1 NC_006351.1 Similar to Ralstonia solanacearum probable sigma-54 interacting transcription regulator protein rsp1668 or rs02227 SWALL:Q8XPH2 (EMBL:AL646086) (384 aa) fasta scores: E(): 2.7e-56, 52.59% id in 308 aa, and to Zymomonas mobilis nitrogen assimilation regulatory protein ntrC SWALL:Q9RNP2 (EMBL:AF179611) (372 aa) fasta scores: E(): 8.3e-41, 52.08% id in 240 aa. Note: Also similar to the C-terminal region of BPSS2249 (468 aa) fasta scores: E(): 1e-48, 47.664% identity in 321 aa overlap; Fis family transcriptional regulator 3024900 3095236 BPSS2250 Burkholderia pseudomallei K96243 Fis family transcriptional regulator YP_112253.1 3023932 D 272560 CDS YP_112254.1 53723269 3096987 complement(3025134..3026084) 1 NC_006351.1 Similar to Streptomyces coelicolor transferase sco6184 or sc2g5.05 SWALL:Q9Z5B8 (EMBL:AL939126) (316 aa) fasta scores: E(): 5.4e-22, 39.81% id in 324 aa, and low similarity to Halobacterium sp. LPS glycosyltransferase Lpg or vng0060G SWALL:Q9HSV4 (EMBL:AE004975) (333 aa) fasta scores: E(): 1.7e-06, 24.19% id in 248 aa; LPS biosynthesis related transferase 3026084 3096987 BPSS2251 Burkholderia pseudomallei K96243 LPS biosynthesis related transferase YP_112254.1 3025134 R 272560 CDS YP_112255.1 53723270 3096610 complement(3026074..3027189) 1 NC_006351.1 Similar to Rhizobium loti ADP-heptose-LPS heptosyltransferase mlr2566 SWALL:Q98I51 (EMBL:AP003000) (335 aa) fasta scores: E(): 4e-13, 28.53% id in 347 aa, and to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF or WaaF or b3620 SWALL:RFAF_ECOLI (SWALL:P37692) (348 aa) fasta scores: E(): 3.1e-08, 27.21% id in 305 aa. Note: This CDS is longer in its N-terminal region than most of its database matches; LPS biosynthesis related glycosyltransferase 3027189 3096610 BPSS2252 Burkholderia pseudomallei K96243 LPS biosynthesis related glycosyltransferase YP_112255.1 3026074 R 272560 CDS YP_112256.1 53723271 3096611 complement(3027186..3028187) 1 NC_006351.1 Similar to Streptomyces coelicolor transferase sco6181 or sc2g5.02 SWALL:Q9Z5C1 (EMBL:AL939126) (344 aa) fasta scores: E(): 2e-31, 40.41% id in 334 aa, and to Methanosarcina mazei glycosyltransferase mm2102 SWALL:AAM31798 (EMBL:AE013451) (327 aa) fasta scores: E(): 1.1e-10, 26.84% id in 231 aa; glycosyltransferase 3028187 3096611 BPSS2253 Burkholderia pseudomallei K96243 glycosyltransferase YP_112256.1 3027186 R 272560 CDS YP_112257.1 53723272 3095322 complement(3028184..3029938) 1 NC_006351.1 Similar to Rhizobium sp. nodulation protein NolO or y4hD SWALL:NOLO_RHISN (SWALL:P55474) (680 aa) fasta scores: E(): 3.9e-56, 39.72% id in 584 aa, and to Methanopyrus kandleri predicted carbamoyl transferase, NodU family mk0097 SWALL:Q8TZ42 (EMBL:AE010309) (515 aa) fasta scores: E(): 1.8e-44, 33.08% id in 526 aa. Note: This CDS is shorter in its C-terminal region than most of its database matches; carbamoyltransferase 3029938 3095322 BPSS2254 Burkholderia pseudomallei K96243 carbamoyltransferase YP_112257.1 3028184 R 272560 CDS YP_112258.1 53723273 3095323 complement(3029942..3031801) 1 NC_006351.1 Poor database matches. C-terminal region is weakly similar to Streptomyces coelicolor transferase SCO6183 or SC2G5.04 SWALL:Q9Z5B9 (EMBL:AL939126) (335 aa) fasta scores: E(): 3.2e-10, 29.08% id in 471 aa; glycosyl transferase 3031801 3095323 BPSS2255 Burkholderia pseudomallei K96243 glycosyl transferase YP_112258.1 3029942 R 272560 CDS YP_112259.1 53723274 3097172 complement(3031798..3032433) 1 NC_006351.1 Similar to Yersinia pestis hypothetical protein ypo1074 SWALL:Q8ZH37 (EMBL:AJ414146) (188 aa) fasta scores: E(): 4.2e-15, 32.75% id in 174 aa, and to Escherichia coli and Shigella flexneri hypothetical protein YaeD SWALL:YAED_ECOLI (SWALL:P31546) (191 aa) fasta scores: E(): 1.2e-14, 35.03% id in 157 aa. CDS is extended at the C-terminus in comparison to some orthologues; haloacid dehalogenase 3032433 3097172 BPSS2256 Burkholderia pseudomallei K96243 haloacid dehalogenase YP_112259.1 3031798 R 272560 CDS YP_112260.1 53723275 3097173 complement(3032424..3033179) 1 NC_006351.1 Similar to Methanosarcina acetivorans 3-oxoacyl-[acyl-carrier protein] reductase ma2686 SWALL:Q8TMH4 (EMBL:AE010965) (239 aa) fasta scores: E(): 7.2e-19, 33.61% id in 238 aa. N-terminus is similar to the N-terminal region of to Pseudomonas paucimobilis 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX SWALL:LINX_PSEPA (SWALL:P50198) (250 aa) fasta scores: E(): 8.3e-16, 34.46% id in 206 aa; short chain dehydrogenase 3033179 3097173 BPSS2257 Burkholderia pseudomallei K96243 short chain dehydrogenase YP_112260.1 3032424 R 272560 CDS YP_112261.1 53723276 3095497 complement(3033392..3033886) 1 NC_006351.1 hypothetical protein 3033886 3095497 BPSS2258 Burkholderia pseudomallei K96243 hypothetical protein YP_112261.1 3033392 R 272560 CDS YP_112262.1 53723277 3095173 complement(3033861..3036827) 1 NC_006351.1 No significant database matches to the full length CDS. N-terminal region is similar to Ralstonia solanacearum probable composite ATP-binding transmembrane ABC transporter protein rsc0478 or rs04417 SWALL:Q8Y258 (EMBL:AL646059) (592 aa) fasta scores: E(): 3.2e-84, 50.42% id in 591 aa, and to Yersinia pestis ABC transport protein ypo2588 SWALL:Q8ZDI0 (EMBL:AJ414152) (631 aa) fasta scores: E(): 6.9e-74, 47.04% id in 576 aa. C-terminal region is Similar to Ralstonia solanacearum probable composite two-component regulatory rsp1676 or rs02235 SWALL:Q8XPG5 (EMBL:AL646086) (796 aa) fasta scores: E(): 3.9e-09, 28.02% id in 339 aa. Similar to BPSL0655, 51.007% identity (53.427% ungapped) in 596 aa overlap; fusion protein, ATP-binding transmembrane ABC transporter and regulatory protein 3036827 3095173 BPSS2259 Burkholderia pseudomallei K96243 fusion protein, ATP-binding transmembrane ABC transporter and regulatory protein YP_112262.1 3033861 R 272560 CDS YP_112263.1 53723278 3095174 complement(3036925..3037992) 1 NC_006351.1 Poor database matches. Weakly similar to an internal region of Deinococcus radiodurans hypothetical protein dr0392 SWALL:Q9RXC3 (EMBL:AE001899) (465 aa) fasta scores: E(): 7.2e-09, 28.05% id in 385 aa; hypothetical protein 3037992 3095174 BPSS2260 Burkholderia pseudomallei K96243 hypothetical protein YP_112263.1 3036925 R 272560 CDS YP_112264.1 53723279 3096568 complement(3038859..3040160) 1 NC_006351.1 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Schizosaccharomyces pombe phosphatidylserine decarboxylase proenzyme 2 precursor SPAC31G5.15 SWALL:O14111 (EMBL:Z98979) (980 aa) fasta scores: E(): 4.9e-09, 33.33% id in 204 aa; phosphatidylserine decarboxylase 3040160 3096568 BPSS2261 Burkholderia pseudomallei K96243 phosphatidylserine decarboxylase YP_112264.1 3038859 R 272560 CDS YP_112265.1 53723280 3095755 complement(3040322..3041029) 1 NC_006351.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 3041029 sdhB 3095755 sdhB Burkholderia pseudomallei K96243 succinate dehydrogenase iron-sulfur subunit YP_112265.1 3040322 R 272560 CDS YP_112266.1 53723281 3096569 complement(3041112..3041357) 1 NC_006351.1 Poor database matches. C-terminal region is weakly similar to Ralstonia solanacearum hypothetical protein rsp0643 or rs05579 SWALL:Q8XS38 (EMBL:AL646080) (103 aa) fasta scores: E(): 2.3, 29.73% id in 74 aa; hypothetical protein 3041357 3096569 BPSS2263 Burkholderia pseudomallei K96243 hypothetical protein YP_112266.1 3041112 R 272560 CDS YP_112267.1 53723282 3096985 complement(3041653..3042540) 1 NC_006351.1 Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GlxR or GlxB1 SWALL:GLXR_ECOLI (SWALL:P77161) (292 aa) fasta scores: E(): 6.2e-18, 30.42% id in 286 aa, and to Helicobacter pylori J99 3-hydroxyacid dehydrogenase jhp0585 SWALL:Q9ZLJ4 (EMBL:AE001491) (285 aa) fasta scores: E(): 2.7e-24, 34.03% id in 285 aa; dehydrogenase 3042540 3096985 BPSS2264 Burkholderia pseudomallei K96243 dehydrogenase YP_112267.1 3041653 R 272560 CDS YP_112268.1 53723283 3096986 complement(3042681..3044030) 1 NC_006351.1 Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component A NtaA or NmoA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 9.8e-53, 40.22% id in 455 aa, and to Agrobacterium tumefaciens monooxygenase ATU3420 or AGR_L_2804 SWALL:Q8UAF4 (EMBL:AE009272) (453 aa) fasta scores: E(): 3.2e-114, 63.71% id in 441 aa. Similar to BPSS1672, 64.865% identity (65.753% ungapped) in 444 aa overlap; monooxygenase 3044030 3096986 BPSS2265 Burkholderia pseudomallei K96243 monooxygenase YP_112268.1 3042681 R 272560 CDS YP_112269.1 53723284 3095361 complement(3044311..3045126) 1 NC_006351.1 Similar to Anabaena sp. 4'-phosphopantetheinyl transferase HetI SWALL:HETI_ANASP (SWALL:P37695) (237 aa) fasta scores: E(): 7.9e-15, 31.5% id in 200 aa, and to Stigmatella aurantiaca MtaA protein SWALL:Q9RFL1 (EMBL:AF188287) (277 aa) fasta scores: E(): 1.5e-37, 43.08% id in 253 aa; 4'-phosphopantetheinyl transferase 3045126 3095361 BPSS2266 Burkholderia pseudomallei K96243 4'-phosphopantetheinyl transferase YP_112269.1 3044311 R 272560 CDS YP_112270.1 53723285 3096387 complement(3045344..3046597) 1 NC_006351.1 Similar to Oxalobacter formigenes oxalate:formate antiporter OxlT SWALL:OXLT_OXAFO (SWALL:Q51330) (417 aa) fasta scores: E(): 1.7e-11, 22.41% id in 406 aa, and to Rhizobium meliloti transport transmembrane protein r01093 or smc02603 SWALL:Q92R34 (EMBL:AL591786) (412 aa) fasta scores: E(): 3e-54, 42.85% id in 392 aa; hypothetical protein 3046597 3096387 BPSS2267 Burkholderia pseudomallei K96243 hypothetical protein YP_112270.1 3045344 R 272560 CDS YP_112271.1 53723286 3096388 complement(3046960..3047433) 1 NC_006351.1 No significant database matches to the full length CDS. C-terminal region is similar to Agrobacterium tumefaciens actinorhodin polyketide dimerase ATU2531 or AGR_C_4599 SWALL:Q8UCF6 (EMBL:AE009199) (179 aa) fasta scores: E(): 1e-13, 37.8% id in 164 aa, and to the C-terminal region of Rhizobium etli probable 4-hydroxyphenylacetate-3-monooxygenase YP049 SWALL:Q8KL32 (EMBL:U80928) (208 aa) fasta scores: E(): 8.8e-17, 40.69% id in 145 aa. Possible alternative translational start site; hypothetical protein 3047433 3096388 BPSS2268 Burkholderia pseudomallei K96243 hypothetical protein YP_112271.1 3046960 R 272560 CDS YP_112272.1 53723287 3095606 complement(3048340..3049497) 1 NC_006351.1 C-terminus region is weakly similar to the C-terminal region of Burkholderia cepacia transcriptional activator BviR SWALL:Q9AHP7 (EMBL:AF296284) (237 aa) fasta scores: E(): 0.025, 24.87% id in 193 aa, and to Pseudomonas chlororaphis transcriptional activator CsaR SWALL:Q939D1 (EMBL:AY040629) (241 aa) fasta scores: E(): 1.3, 25.76% id in 229 aa. Similar to BPSS1804, 52.208% identity (58.601% ungapped) in 385 aa overlap; transcriptional regulator 3049497 3095606 BPSS2269 Burkholderia pseudomallei K96243 transcriptional regulator YP_112272.1 3048340 R 272560 CDS YP_112273.1 53723288 3095026 complement(3050150..3051550) 1 NC_006351.1 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3051550 lpdV 3095026 lpdV Burkholderia pseudomallei K96243 dihydrolipoamide dehydrogenase YP_112273.1 3050150 R 272560 CDS YP_112274.1 53723289 3096274 complement(3051555..3053006) 1 NC_006351.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; branched-chain alpha-keto acid dehydrogenase subunit E2 3053006 bkdB 3096274 bkdB Burkholderia pseudomallei K96243 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_112274.1 3051555 R 272560 CDS YP_112275.1 53723290 3096229 complement(3053008..3054051) 1 NC_006351.1 Similar to Pseudomonas putida 2-oxoisovalerate dehydrogenase beta subunit BkdA2 SWALL:ODBB_PSEPU (SWALL:P09061) (339 aa) fasta scores: E(): 3.9e-125, 87.83% id in 337 aa, and to Pseudomonas aeruginosa 2-oxoisovalerate dehydrogenase pa2248 SWALL:Q9I1M1 (EMBL:AE004650) (350 aa) fasta scores: E(): 4.7e-122, 82.37% id in 346 aa. Possible alternative translational start site; 2-oxoisovalerate dehydrogenase subunit beta 3054051 bkdA2 3096229 bkdA2 Burkholderia pseudomallei K96243 2-oxoisovalerate dehydrogenase subunit beta YP_112275.1 3053008 R 272560 CDS YP_112276.1 53723291 3096116 complement(3054057..3055289) 1 NC_006351.1 Similar to Pseudomonas putida 2-oxoisovalerate dehydrogenase alpha subunit BkdA1 SWALL:ODBA_PSEPU (SWALL:P09060) (410 aa) fasta scores: E(): 1.6e-139, 80% id in 410 aa, and to Pseudomonas aeruginosa 2-oxoisovalerate dehydrogenase pa2247 SWALL:Q9I1M2 (EMBL:AE004650) (410 aa) fasta scores: E(): 6.2e-145, 83.9% id in 410 aa; 2-oxoisovalerate dehydrogenase subunit alpha 3055289 bkdA1 3096116 bkdA1 Burkholderia pseudomallei K96243 2-oxoisovalerate dehydrogenase subunit alpha YP_112276.1 3054057 R 272560 CDS YP_112277.1 53723292 3095607 3056541..3056981 1 NC_006351.1 Weakly similar to Mycobacterium tuberculosis hypothetical protein rv1919c or mt1970 or mtv050.03C SWALL:O53961 (EMBL:AL022020) (161 aa) fasta scores: E(): 0.0014, 26.27% id in 137 aa, and to Mycobacterium leprae hypothetical protein ml1983 SWALL:Q9CBH1 (EMBL:AL583924) (155 aa) fasta scores: E(): 0.0099, 25.56% id in 133 aa; hypothetical protein 3056981 3095607 BPSS2274 Burkholderia pseudomallei K96243 hypothetical protein YP_112277.1 3056541 D 272560 CDS YP_112278.1 53723293 3095185 complement(3057306..3058421) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2122 SWALL:Q9I1Z3 (EMBL:AE004639) (378 aa) fasta scores: E(): 1.8e-81, 53.53% id in 368 aa; hypothetical protein 3058421 3095185 BPSS2275 Burkholderia pseudomallei K96243 hypothetical protein YP_112278.1 3057306 R 272560 CDS YP_112279.1 53723294 3095186 3058719..3059654 1 NC_006351.1 Similar to Pseudomonas putida transcriptional activator protein NahR SWALL:NAHR_PSEPU (SWALL:P10183) (300 aa) fasta scores: E(): 3.1e-30, 34.48% id in 290 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2121 SWALL:Q9I1Z4 (EMBL:AE004639) (301 aa) fasta scores: E(): 8.6e-77, 67.56% id in 296 aa; LysR family transcriptional regulator 3059654 3095186 BPSS2276 Burkholderia pseudomallei K96243 LysR family transcriptional regulator YP_112279.1 3058719 D 272560 CDS YP_112280.1 53723295 3095876 3059829..3060260 1 NC_006351.1 hypothetical protein 3060260 3095876 BPSS2277 Burkholderia pseudomallei K96243 hypothetical protein YP_112280.1 3059829 D 272560 CDS YP_112281.1 53723296 3095902 3060560..3062218 1 NC_006351.1 Similar to Mycobacterium leprae cholesterol oxidase ml0389 SWALL:Q9CCV1 (EMBL:AL583918) (569 aa) fasta scores: E(): 2.8e-82, 44.79% id in 547 aa. Weakly similar to the C-terminal region of Phanerochaete chrysosporium cellobiose dehydrogenase precursor Cdh-1 and Cdh-2 SWALL:CDH_PHACH (SWALL:Q01738) (773 aa) fasta scores: E(): 0.011, 19.96% id in 571 aa; hypothetical protein 3062218 3095902 BPSS2278 Burkholderia pseudomallei K96243 hypothetical protein YP_112281.1 3060560 D 272560 CDS YP_112282.1 53723297 3095903 complement(3062508..3064781) 1 NC_006351.1 No significant database matches to the full length CDS, probable gene fusion. N-terminal region is similar to Mycobacterium tuberculosis hypothetical protein rv1869c or mtcy359.04 or mt1918 SWALL:P95146 (EMBL:Z83859) (411 aa) fasta scores: E(): 3.4e-38, 33.66% id in 407 aa, and to Pseudomonas putida putidaredoxin reductase CamA SWALL:CAMA_PSEPU (SWALL:P16640) (422 aa) fasta scores: E(): 4.7e-29, 29.68% id in 411 aa. C-terminal region is similar to Rhizobium loti hypothetical protein mlr3635 SWALL:Q98FS8 (EMBL:AP003002) (361 aa) fasta scores: E(): 1.5e-27, 31.84% id in 336 aa. Possible alternative translational start sites; bifunctional pyridine nucleotide-disulfide oxidoreductase/patatin-like phospholipase 3064781 3095903 BPSS2279 Burkholderia pseudomallei K96243 bifunctional pyridine nucleotide-disulfide oxidoreductase/patatin-like phospholipase YP_112282.1 3062508 R 272560 CDS YP_112283.1 53723298 3097266 complement(3064914..3065309) 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc1511 or rs03793 SWALL:Q8XZ93 (EMBL:AL646065) (122 aa) fasta scores: E(): 6.2e-06, 36.92% id in 130 aa, and to the C-terminal region of Escherichia coli, and Shigella flexneri DnaK suppressor protein SWALL:DKSA_ECOLI (SWALL:P18274) (151 aa) fasta scores: E(): 0.0069, 28.81% id in 118 aa; DksA/TraR C4-type zinc finger protein 3065309 3097266 BPSS2280 Burkholderia pseudomallei K96243 DksA/TraR C4-type zinc finger protein YP_112283.1 3064914 R 272560 CDS YP_112284.1 53723299 3097267 3066655..3067926 1 NC_006351.1 Similar to Alcaligenes eutrophus intracellular PHB depolymerase PhaZre SWALL:O87189 (EMBL:AB017612) (419 aa) fasta scores: E(): 6.3e-54, 38.47% id in 421 aa, and to Xanthomonas campestris PHB depolymerase xcc1353 SWALL:AAM40651 (EMBL:AE012234) (466 aa) fasta scores: E(): 3.5e-56, 39.26% id in 438 aa; PHB depolymerase 3067926 3097267 BPSS2281 Burkholderia pseudomallei K96243 PHB depolymerase YP_112284.1 3066655 D 272560 CDS YP_112285.1 53723300 3095815 3068154..3069995 1 NC_006351.1 class I; catalyzes the formation of deoxyribonucleotides from their corresponding ribonucleotides; ribonucleotide reductase-like protein 3069995 3095815 BPSS2282 Burkholderia pseudomallei K96243 ribonucleotide reductase-like protein YP_112285.1 3068154 D 272560 CDS YP_112286.1 53723301 3095816 3070172..3071881 1 NC_006351.1 Similar to Chlorobium tepidum hypothetical protein ct0831 SWALL:AAM72067 (EMBL:AE012850) (515 aa) fasta scores: E(): 3e-53, 37.37% id in 495 aa, and to Pseudomonas aeruginosa hypothetical protein pa4701 SWALL:Q9HV96 (EMBL:AE004884) (520 aa) fasta scores: E(): 4.6e-49, 36.63% id in 505 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 3071881 3095816 BPSS2283 Burkholderia pseudomallei K96243 hypothetical protein YP_112286.1 3070172 D 272560 CDS YP_112287.1 53723302 3096601 3072406..3073437 1 NC_006351.1 Similar to Streptomyces coelicolor hypothetical protein SCO0162 or SCJ1.11 SWALL:Q9RJ03 (EMBL:AL939104) (330 aa) fasta scores: E(): 1.5e-26, 37.3% id in 319 aa, and to Streptomyces coelicolor hypothetical protein SCO0215 or SCJ12.27c SWALL:Q9RI33 (EMBL:AL939104) (335 aa) fasta scores: E(): 2.3e-23, 34.28% id in 315 aa. CDS is extended at the N-terminus in comparison to some orthologues; hypothetical protein 3073437 3096601 BPSS2284 Burkholderia pseudomallei K96243 hypothetical protein YP_112287.1 3072406 D 272560 CDS YP_112288.1 53723303 3095829 3073434..3075266 1 NC_006351.1 Similar to the C-terminal region of Stylosanthes hamata high affinity sulphate transporter 2 ST2 SWALL:SUT2_STYHA (SWALL:P53392) (662 aa) fasta scores: E(): 4.5e-28, 25% id in 584 aa. Similar to Corynebacterium glutamicum sulfate permease and related transporters cgl1051 SWALL:BAB98444 (EMBL:AP005277) (579 aa) fasta scores: E(): 3.4e-34, 35.87% id in 577 aa. CDS is extended at the N-terminus in comparison to orthologues; ulfate transporter family protein 3075266 3095829 BPSS2285 Burkholderia pseudomallei K96243 ulfate transporter family protein YP_112288.1 3073434 D 272560 CDS YP_112289.1 53723304 3095830 complement(3075738..3076256) 1 NC_006351.1 Poor similarity to Aeropyrum pernix hypothetical protein ape2489 SWALL:Q9Y8Z5 (EMBL:AP000064) (150 aa) fasta scores: E(): 1.6e-10, 39.39% id in 132 aa, and to Pyrobaculum aerophilum conserved protein with 2 CBS domains pae2961 SWALL:Q8ZU39 (EMBL:AE009903) (139 aa) fasta scores: E(): 7.6e-08, 28.98% id in 138 aa; hypothetical protein 3076256 3095830 BPSS2286 Burkholderia pseudomallei K96243 hypothetical protein YP_112289.1 3075738 R 272560 CDS YP_112290.1 53723305 3097094 3076641..3077294 1 NC_006351.1 Similar to Methanopyrus kandleri nitroreductase mk1490 SWALL:Q8TVA2 (EMBL:AE010439) (233 aa) fasta scores: E(): 0.00036, 32.21% id in 208 aa. C-terminal region is weakly similar to Pyrococcus abyssi hypothetical protein Pab1763 pab1763 SWALL:Q9V092 (EMBL:AJ248285) (196 aa) fasta scores: E(): 3.7e-07, 28.57% id in 196 aa; hypothetical protein 3077294 3097094 BPSS2287 Burkholderia pseudomallei K96243 hypothetical protein YP_112290.1 3076641 D 272560 CDS YP_112291.1 53723306 3097095 complement(3077355..3077789) 1 NC_006351.1 Similar to Chenopodium rubrum 18.3 kDa class I heat shock protein HSP18 SWALL:HS11_CHERU (SWALL:Q05832) (161 aa) fasta scores: E(): 2.8e-10, 37.06% id in 143 aa, and to Ralstonia solanacearum small heat shock protein rsc0200 or rs00632 SWALL:Q8Y2Y1 (EMBL:AL646058) (140 aa) fasta scores: E(): 8.7e-23, 52.44% id in 143 aa; heat shock protein 20 3077789 3097095 BPSS2288 Burkholderia pseudomallei K96243 heat shock protein 20 YP_112291.1 3077355 R 272560 CDS YP_112292.1 53723307 3095957 complement(3078195..3079322) 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2e-06, 27.79% id in 421 aa, and to Ralstonia solanacearum probable porin transmembrane protein rsc1084 or rs04103 SWALL:Q8Y0G0 (EMBL:AL646062) (364 aa) fasta scores: E(): 1.9e-17, 31.41% id in 382 aa; porin protein 3079322 3095957 BPSS2289 Burkholderia pseudomallei K96243 porin protein YP_112292.1 3078195 R 272560 CDS YP_112293.1 53723308 3095958 complement(3079402..3081207) 1 NC_006351.1 Similar to Pseudomonas oleovorans medium-chain-fatty-acid--CoA ligase AlkK SWALL:ALKK_PSEOL (SWALL:Q00594) (546 aa) fasta scores: E(): 2.6e-29, 31.56% id in 583 aa, and to Pseudomonas aeruginosa probable medium-chain acyl-CoA ligase pa3924 SWALL:Q9HX89 (EMBL:AE004810) (560 aa) fasta scores: E(): 2.5e-63, 47.77% id in 584 aa; AMP-binding protein 3081207 3095958 BPSS2290 Burkholderia pseudomallei K96243 AMP-binding protein YP_112293.1 3079402 R 272560 CDS YP_112294.1 53723309 3097115 complement(3081508..3084273) 1 NC_006351.1 Weakly similar to Klebsiella pneumoniae AcoK SWALL:Q48411 (EMBL:U10553) (921 aa) fasta scores: E(): 1.8e-39, 28.42% id in 943 aa, and to Pseudomonas oleovorans regulatory protein AlkS SWALL:ALKS_PSEOL (SWALL:P17051) (882 aa) fasta scores: E(): 8.1e-12, 23.02% id in 925 aa; GerE family regulatory protein 3084273 3097115 BPSS2291 Burkholderia pseudomallei K96243 GerE family regulatory protein YP_112294.1 3081508 R 272560 CDS YP_112295.1 53723310 3097208 3084437..3085498 1 NC_006351.1 hypothetical protein 3085498 3097208 BPSS2292 Burkholderia pseudomallei K96243 hypothetical protein YP_112295.1 3084437 D 272560 CDS YP_112296.1 53723311 3097209 3085601..3086584 1 NC_006351.1 Similar to Escherichia coli quinone oxidoreductase Qor or Hcz SWALL:QOR_ECOLI (SWALL:P28304) (327 aa) fasta scores: E(): 6.7e-49, 46.93% id in 326 aa, and to Ralstonia solanacearum probable NADPH:quinone reductase, zeta-crystallin homolog oxidoreductase qor or rsc2184 or rs01415 SWALL:Q8XXD1 (EMBL:AL646068) (324 aa) fasta scores: E(): 3.7e-69, 58.51% id in 323 aa. Similar to BPSL1169, 56.037% identity (56.037% ungapped) in 323 aa overlap; quinone oxidoreductase 3086584 3097209 BPSS2293 Burkholderia pseudomallei K96243 quinone oxidoreductase YP_112296.1 3085601 D 272560 CDS YP_112297.1 53723312 3094912 3086586..3087434 1 NC_006351.1 Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 4.3e-28, 39.86% id in 291 aa, and to Pseudomonas aeruginosa taurine dioxygenase pa3935 SWALL:Q9HX81 (EMBL:AE004811) (277 aa) fasta scores: E(): 1.3e-28, 42.06% id in 290 aa; taurine catabolism dioxygenase TauD, TfdA family protein 3087434 3094912 BPSS2294 Burkholderia pseudomallei K96243 taurine catabolism dioxygenase TauD, TfdA family protein YP_112297.1 3086586 D 272560 CDS YP_112298.1 53723313 3094913 3087533..3088552 1 NC_006351.1 Weakly similar to Rhizobium loti hypothetical protein mll0106 SWALL:Q98NK0 (EMBL:AP002994) (309 aa) fasta scores: E(): 1.9e-08, 25.55% id in 313 aa, and to Thermoanaerobacter tengcongensis hypothetical protein tte0719 SWALL:Q8RBU0 (EMBL:AE013040) (275 aa) fasta scores: E(): 3e-07, 28.88% id in 315 aa; hypothetical protein 3088552 3094913 BPSS2295 Burkholderia pseudomallei K96243 hypothetical protein YP_112298.1 3087533 D 272560 CDS YP_112299.1 53723314 3096453 3088719..3090044 1 NC_006351.1 Similar to Caulobacter crescentus major facilitator family transporter cc0336 SWALL:Q9AB95 (EMBL:AE005706) (438 aa) fasta scores: E(): 1.8e-23, 30.71% id in 394 aa, and weakly similar to Bacillus subtilis hexuronate transporter ExuT SWALL:EXUT_BACSU (SWALL:O34456) (422 aa) fasta scores: E(): 9.6e-15, 24.62% id in 398 aa; transport protein 3090044 3096453 BPSS2296 Burkholderia pseudomallei K96243 transport protein YP_112299.1 3088719 D 272560 CDS YP_112300.1 53723315 3096454 3090067..3090663 1 NC_006351.1 Similar to Caulobacter crescentus hypothetical protein cc2185 SWALL:Q9A6A9 (EMBL:AE005890) (207 aa) fasta scores: E(): 3.8e-23, 45.72% id in 199 aa, and to Deinococcus radiodurans hypothetical protein dr0945 SWALL:Q9RVS7 (EMBL:AE001947) (195 aa) fasta scores: E(): 6.2e-21, 43.78% id in 185 aa; hypothetical protein 3090663 3096454 BPSS2297 Burkholderia pseudomallei K96243 hypothetical protein YP_112300.1 3090067 D 272560 CDS YP_112301.1 53723316 3096806 3090660..3091382 1 NC_006351.1 Similar to the C-terminal region of Caulobacter crescentus hypothetical protein cc1843 SWALL:Q9A783 (EMBL:AE005858) (214 aa) fasta scores: E(): 1.2e-16, 31.53% id in 222 aa, and to Rhizobium meliloti hypothetical protein r01644 or smc00952 SWALL:Q92PT6 (EMBL:AL591787) (221 aa) fasta scores: E(): 3.1e-15, 32.35% id in 204 aa. CDS is extended at the N-terminus in comparison to orthologues; hypothetical protein 3091382 3096806 BPSS2298 Burkholderia pseudomallei K96243 hypothetical protein YP_112301.1 3090660 D 272560 CDS YP_112302.1 53723317 3095001 <3092021..3094897 1 NC_006351.1 Similar to Aquifex aeolicus DMS reductase chain A AQ_1234 SWALL:O67280 (EMBL:AE000730) (984 aa) fasta scores: E(): 1.3e-171, 49.21% id in 949 aa. Weakly similar to Salmonella typhimurium thiosulfate reductase precursor PhsA or stm2065 SWALL:PHSA_SALTY (SWALL:P37600) (758 aa) fasta scores: E(): 1.3e-15, 24.03% id in 903 aa. CDS is truncated at the N-terminus in comparison to some orthologues; molybdopterin oxidoreductase 3094897 3095001 BPSS2299 Burkholderia pseudomallei K96243 molybdopterin oxidoreductase YP_112302.1 <3092021 D 272560 CDS YP_112303.1 53723318 3095002 3094911..3095708 1 NC_006351.1 N-terminus is similar to the N-terminal regions of Escherichia coli anaerobic dimethyl sulfoxide reductase chain B DmsB SWALL:DMSB_ECOLI (SWALL:P18776) (204 aa) fasta scores: E(): 5.4e-16, 38.41% id in 177 aa, and Aquifex aeolicus DMSO reductase chain B AQ_1232 SWALL:O67279 (EMBL:AE000730) (254 aa) fasta scores: E(): 1.2e-47, 66.82% id in 205 aa. Similarity with Aquifex aeolicus and other proteins ends at a glycine rich region, residues 209 to 227. Possible fusion protein; iron-sulfur cluster protein 3095708 3095002 BPSS2300 Burkholderia pseudomallei K96243 iron-sulfur cluster protein YP_112303.1 3094911 D 272560 CDS YP_112304.1 53723319 3097188 3095766..3096716 1 NC_006351.1 Similar to Rhizobium loti DMSO reductase chain C mll5612 SWALL:Q98BE5 (EMBL:AP003007) (311 aa) fasta scores: E(): 5.9e-26, 36.42% id in 324 aa. N-terminus is weakly similar to the N-terminal region of Escherichia coli anaerobic dimethyl sulfoxide reductase chain C DmsC SWALL:DMSC_ECOLI (SWALL:P18777) (287 aa) fasta scores: E(): 0.03, 27.67% id in 224 aa; hypothetical protein 3096716 3097188 BPSS2301 Burkholderia pseudomallei K96243 hypothetical protein YP_112304.1 3095766 D 272560 CDS YP_112305.1 53723320 3097189 3097926..3098816 1 NC_006351.1 Weakly similar to Leptospira interrogans polysaccharide deacetylase la1998 SWALL:AAN49197 (EMBL:AE011373) (300 aa) fasta scores: E(): 5e-16, 27.75% id in 245 aa. C-terminal region is weakly similar to Lactococcus lactis hypothetical protein SWALL:Q8VUB1 (EMBL:AF188107) (250 aa) fasta scores: E(): 9.4e-13, 27.34% id in 245 aa. Similar to BPSS1928, 55.512% identity (57.317% ungapped) in 254 aa overlap; hypothetical protein 3098816 3097189 BPSS2302 Burkholderia pseudomallei K96243 hypothetical protein YP_112305.1 3097926 D 272560 CDS YP_112306.1 53723321 3096189 3099281..3100672 1 NC_006351.1 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal region of Fusobacterium nucleatum hypothetical cytosolic protein fn0456 SWALL:Q8RG61 (EMBL:AE010557) (380 aa) fasta scores: E(): 3.9e-29, 33.64% id in 324 aa, and Borrelia burgdorferi hypothetical protein Bb0165 bb0165 SWALL:O51187 (EMBL:AE001127) (614 aa) fasta scores: E(): 4.5e-11, 28.86% id in 336 aa; hypothetical protein 3100672 3096189 BPSS2303 Burkholderia pseudomallei K96243 hypothetical protein YP_112306.1 3099281 D 272560 CDS YP_112307.1 53723322 3096190 complement(3100875..3103394) 1 NC_006351.1 Internal region is similar to an internal region of Escherichia coli penicillin-binding protein 1A MrcA or PonA SWALL:PBPA_ECOLI (SWALL:P02918) (850 aa) fasta scores: E(): 1.4e-21, 30.8% id in 737 aa. C-terminal region is similar to Chlorobium tepidum penicillin-binding protein 1 CT0176 SWALL:AAM71424 (EMBL:AE012797) (763 aa) fasta scores: E(): 1.5e-58, 36.31% id in 771 aa; penicillin-binding protein 3103394 3096190 BPSS2304 Burkholderia pseudomallei K96243 penicillin-binding protein YP_112307.1 3100875 R 272560 CDS YP_112308.1 53723323 3096196 complement(3104258..3105826) 1 NC_006351.1 Similar to Xanthomonas axonopodis disulphide-isomerase xac3878 SWALL:AAM38720 (EMBL:AE012037) (526 aa) fasta scores: E(): 3.7e-46, 36.06% id in 524 aa, and to Xanthomonas campestris disulphide-isomerase xcc3823 SWALL:AAM43059 (EMBL:AE012503) (525 aa) fasta scores: E(): 4.2e-41, 34.04% id in 517 aa; lipoprotein 3105826 3096196 BPSS2305 Burkholderia pseudomallei K96243 lipoprotein YP_112308.1 3104258 R 272560 CDS YP_112309.1 53723324 3095436 complement(3106526..3107698) 1 NC_006351.1 Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.9e-19, 35.01% id in 377 aa, and to Ralstonia solanacearum probable porin transmembrane protein rsc1082 or rs04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 1.4e-45, 43.18% id in 389 aa. Similar to BPSS1679, 57.069% identity (58.421% ungapped) in 389 aa overlap, and to BPSS0252, 51.451% identity (54.167% ungapped) in 379 aa overlap; porin protein 3107698 3095436 BPSS2306 Burkholderia pseudomallei K96243 porin protein YP_112309.1 3106526 R 272560 CDS YP_112310.1 53723325 3095437 complement(3108024..3109610) 1 NC_006351.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3109610 3095437 BPSS2307 Burkholderia pseudomallei K96243 amidase YP_112310.1 3108024 R 272560 CDS YP_112311.1 53723326 3097022 3110107..3110430 1 NC_006351.1 hypothetical protein 3110430 3097022 BPSS2308 Burkholderia pseudomallei K96243 hypothetical protein YP_112311.1 3110107 D 272560 CDS YP_112312.1 53723327 3097023 complement(3110622..3111197) 1 NC_006351.1 Similar to Agrobacterium tumefaciens acetyltransferase ATU2080 or AGR_C_3768 SWALL:Q8UDP1 (EMBL:AE009158) (177 aa) fasta scores: E(): 5.5e-19, 43.42% id in 175 aa, and to Escherichia coli hypothetical acetyltransferase YhhY SWALL:YHHY_ECOLI (SWALL:P46854) (162 aa) fasta scores: E(): 1.1e-17, 43.29% id in 164 aa. CDS is extended at the N-terminus in comparison to some orthologues; acetyltransferase (GNAT) family protein 3111197 3097023 BPSS2309 Burkholderia pseudomallei K96243 acetyltransferase (GNAT) family protein YP_112312.1 3110622 R 272560 CDS YP_112313.1 53723328 3096367 complement(3111194..3111751) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa1377 SWALL:Q9I3W7 (EMBL:AE004567) (177 aa) fasta scores: E(): 1.1e-13, 32.92% id in 164 aa, and to Salmonella typhimurium transferase stm3546 SWALL:Q8ZLG1 (EMBL:AE008863) (162 aa) fasta scores: E(): 5.9e-13, 35.36% id in 164 aa; acetyltransferase (GNAT) family protein 3111751 3096367 BPSS2310 Burkholderia pseudomallei K96243 acetyltransferase (GNAT) family protein YP_112313.1 3111194 R 272560 CDS YP_112314.1 53723329 3096368 complement(3111756..3113117) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2530 SWALL:Q9I0V3 (EMBL:AE004680) (441 aa) fasta scores: E(): 4.3e-78, 50.45% id in 436 aa, and to Anabaena sp. hypothetical protein all1089 SWALL:Q8YXW8 (EMBL:AP003584) (448 aa) fasta scores: E(): 9.4e-50, 36.01% id in 422 aa; hypothetical protein 3113117 3096368 BPSS2311 Burkholderia pseudomallei K96243 hypothetical protein YP_112314.1 3111756 R 272560 CDS YP_112315.1 53723330 3097148 complement(3113117..3114550) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa2529 SWALL:Q9I0V4 (EMBL:AE004680) (477 aa) fasta scores: E(): 5.3e-102, 60.87% id in 478 aa. Weakly similar to Escherichia coli, and Shigella flexneri TldD protein SWALL:TLDD_ECOLI (SWALL:P46473) (481 aa) fasta scores: E(): 1.6e-12, 27.23% id in 437 aa; modulator of DNA gyrase 3114550 3097148 BPSS2312 Burkholderia pseudomallei K96243 modulator of DNA gyrase YP_112315.1 3113117 R 272560 CDS YP_112316.1 53723331 3095719 3115766..3117166 1 NC_006351.1 Similar to Ralstonia solanacearum probable transmembrane sensor histidine kinase transcription regulator protein rsc0021 or rs01843 SWALL:Q8Y3F9 (EMBL:AL646057) (487 aa) fasta scores: E(): 5.6e-64, 51.92% id in 468 aa. C-terminus is similar to the C-terminal region of Bacillus subtilis sensor protein DegS or SacU SWALL:DEGS_BACSU (SWALL:P13799) (385 aa) fasta scores: E(): 1.4e-19, 34.83% id in 267 aa; sensor kinase 3117166 3095719 BPSS2314 Burkholderia pseudomallei K96243 sensor kinase YP_112316.1 3115766 D 272560 CDS YP_112317.1 53723332 3095036 3117163..3117810 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri nitrate/nitrite response regulator protein NarL or FrdR SWALL:NARL_ECOLI (SWALL:P10957) (216 aa) fasta scores: E(): 2.5e-21, 38.53% id in 205 aa, and to Brucella melitensis transcriptional regulatory protein bmei1582 SWALL:Q8YFE0 (EMBL:AE009594) (213 aa) fasta scores: E(): 3.7e-28, 46.53% id in 202 aa; response regulator protein 3117810 3095036 BPSS2315 Burkholderia pseudomallei K96243 response regulator protein YP_112317.1 3117163 D 272560 CDS YP_112318.1 53723333 3095037 complement(3118004..3118600) 1 NC_006351.1 Similar to Ralstonia solanacearum probable signal peptide protein rsc2958 or rs01342 SWALL:Q8XV73 (EMBL:AL646072) (211 aa) fasta scores: E(): 8.3e-26, 40.59% id in 202 aa, and to Neisseria meningitidis hypothetical protein nmb1963 SWALL:Q9JXN1 (EMBL:AE002544) (196 aa) fasta scores: E(): 2.4e-13, 30.3% id in 198 aa; hypothetical protein 3118600 3095037 BPSS2316 Burkholderia pseudomallei K96243 hypothetical protein YP_112318.1 3118004 R 272560 CDS YP_112319.1 53723334 3096972 complement(3118893..3119657) 1 NC_006351.1 Similar to Pseudomonas aeruginosa hypothetical protein pa0862 SWALL:Q9I579 (EMBL:AE004521) (260 aa) fasta scores: E(): 1.6e-52, 50.83% id in 240 aa; hypothetical protein 3119657 3096972 BPSS2317 Burkholderia pseudomallei K96243 hypothetical protein YP_112319.1 3118893 R 272560 CDS YP_112320.1 53723335 3096973 complement(3119667..3122108) 1 NC_006351.1 Similar to Rhizobium loti hypothetical protein mlr3171 SWALL:Q98GU5 (EMBL:AP003001) (832 aa) fasta scores: E(): 6.3e-114, 39.3% id in 804 aa, and to Pseudomonas aeruginosa hypothetical protein pa0861 SWALL:Q9I580 (EMBL:AE004521) (818 aa) fasta scores: E(): 1.2e-112, 39.82% id in 786 aa. Possible alternative translational start site; hypothetical protein 3122108 3096973 BPSS2318 Burkholderia pseudomallei K96243 hypothetical protein YP_112320.1 3119667 R 272560 CDS YP_112321.1 53723336 3095019 complement(3122425..3123495) 1 NC_006351.1 Similar to Burkholderia cepacia lipase precursor LipA SWALL:LIP_BURCE (SWALL:P22088) (364 aa) fasta scores: E(): 2.1e-83, 65.65% id in 364 aa, and to Pseudomonas sp. lipase precursor Lip SWALL:LIP_PSES5 (SWALL:P25275) (364 aa) fasta scores: E(): 5.4e-84, 66.2% id in 364 aa. Similar to BPSS1741, 67.397% identity (70.690% ungapped) in 365 aa overlap; lipase precursor 3123495 lipA2 3095019 lipA2 Burkholderia pseudomallei K96243 lipase precursor YP_112321.1 3122425 R 272560 CDS YP_112322.1 53723337 3096967 complement(3123622..3124386) 1 NC_006351.1 C-terminal region is similar to Anabaena sp. 4'-phosphopantetheinyl transferase HetI SWALL:HETI_ANASP (SWALL:P37695) (237 aa) fasta scores: E(): 2.3e-15, 32.75% id in 229 aa, and Ralstonia solanacearum phosphopantetheinyl transferase rsp0163 or rs05515 SWALL:Q8XTF0 (EMBL:AL646076) (272 aa) fasta scores: E(): 2.8e-12, 34.22% id in 225 aa. Possible alternative translational start sites; 4'-phosphopantetheinyl transferase 3124386 3096967 BPSS2320 Burkholderia pseudomallei K96243 4'-phosphopantetheinyl transferase YP_112322.1 3123622 R 272560 CDS YP_112323.1 53723338 3096997 complement(3124449..3124847) 1 NC_006351.1 Poor database matches. Weakly similar to the C-terminal region of Vibrio cholerae hypothetical protein vca1012 SWALL:Q9KKT8 (EMBL:AE004427) (155 aa) fasta scores: E(): 0.79, 28.92% id in 121 aa; hypothetical protein 3124847 3096997 BPSS2321 Burkholderia pseudomallei K96243 hypothetical protein YP_112323.1 3124449 R 272560 CDS YP_112324.1 53723339 3096998 complement(3124887..3126185) 1 NC_006351.1 hypothetical protein 3126185 3096998 BPSS2322 Burkholderia pseudomallei K96243 hypothetical protein YP_112324.1 3124887 R 272560 CDS YP_112325.1 53723340 3096923 complement(3126182..3126964) 1 NC_006351.1 Similar to Escherichia coli O157:H7 hypothetical protein z1555 or ecs1295 SWALL:Q8XAK5 (EMBL:AE005305) (262 aa) fasta scores: E(): 1.5e-24, 33.33% id in 261 aa, and to Vibrio cholerae hypothetical protein vca0853 SWALL:Q9KL93 (EMBL:AE004413) (247 aa) fasta scores: E(): 5.5e-15, 27.63% id in 228 aa; hypothetical protein 3126964 3096923 BPSS2323 Burkholderia pseudomallei K96243 hypothetical protein YP_112325.1 3126182 R 272560 CDS YP_112326.1 53723341 3096924 complement(3127021..3128448) 1 NC_006351.1 Weakly similar to Vibrio cholerae hypothetical protein vca0854 SWALL:Q9KL92 (EMBL:AE004413) (419 aa) fasta scores: E(): 1.3e-11, 25.1% id in 470 aa, and to Borrelia burgdorferi hypothetical protein bbj27 SWALL:O50782 (EMBL:AE000787) (411 aa) fasta scores: E(): 1.6e-06, 21.8% id in 477 aa; permease 3128448 3096924 BPSS2324 Burkholderia pseudomallei K96243 permease YP_112326.1 3127021 R 272560 CDS YP_112327.1 53723342 3097164 complement(3128448..3129149) 1 NC_006351.1 Similar to Streptomyces coelicolor ABC-transporter ATP binding protein SCO5870 or SC2E9.11 SWALL:O54136 (EMBL:AL939125) (230 aa) fasta scores: E(): 2.5e-33, 52.48% id in 221 aa, and to Thermotoga maritima hypothetical ABC transporter ATP-binding protein tm0352 SWALL:Y352_THEMA (SWALL:Q9WYI7) (234 aa) fasta scores: E(): 4.7e-33, 48.01% id in 227 aa; ABC-transporter ATP binding protein 3129149 3097164 BPSS2325 Burkholderia pseudomallei K96243 ABC-transporter ATP binding protein YP_112327.1 3128448 R 272560 CDS YP_112328.1 53723343 3097165 complement(3129149..3130636) 1 NC_006351.1 Similar to Caulobacter crescentus monooxygenase, flavin-binding family cc0774 SWALL:Q9AA34 (EMBL:AE005753) (458 aa) fasta scores: E(): 2e-54, 38.84% id in 466 aa, and to the N-terminal region of Homo sapiens dimethylaniline monooxygenase [N-oxide forming] 1 FMO1 SWALL:FMO1_HUMAN (SWALL:Q01740) (531 aa) fasta scores: E(): 1.2e-22, 34.43% id in 424 aa. CDS is extended at the N-terminus in comparison to orthologues; flavin-binding monooxygenase-like protein 3130636 3097165 BPSS2326 Burkholderia pseudomallei K96243 flavin-binding monooxygenase-like protein YP_112328.1 3129149 R 272560 CDS YP_112329.1 53723344 3095013 complement(3130669..3134790) 1 NC_006351.1 No significant database matches to the full length CDS. N-terminal region is similar to Bacillus halodurans cytochrome P450 hydroxylase bh0579 SWALL:Q9KFA6 (EMBL:AP001509) (453 aa) fasta scores: E(): 3.6e-38, 32.75% id in 461 aa, and to the N-terminal region of Bacillus megaterium bifunctional P-450:NADPH-p450 reductase Cyp102A1 or Cyp102 SWALL:CPXB_BACME (SWALL:P14779) (1048 aa) fasta scores: E(): 1.1e-24, 25.57% id in 606 aa; cytochrome P450 family protein 3134790 3095013 BPSS2327 Burkholderia pseudomallei K96243 cytochrome P450 family protein YP_112329.1 3130669 R 272560 CDS YP_112330.1 53723345 3094995 complement(3134787..3141608) 1 NC_006351.1 Internal regions are weakly similar to the N-terminal region of Streptomyces coelicolor multi-domain beta keto-acyl synthase sco0126 or scj21.07 SWALL:Q9S200 (EMBL:AL939104) (2082 aa) fasta scores: E(): 2.9e-31, 28.89% id in 1059 aa, and to the C-terminal region of Streptomyces avermitilis modular polyketide synthase SWALL:Q93HH9 (EMBL:AB070941) (2365 aa) fasta scores: E(): 7.5e-23, 27.79% id in 1903 aa; beta keto-acyl synthase 3141608 3094995 BPSS2328 Burkholderia pseudomallei K96243 beta keto-acyl synthase YP_112330.1 3134787 R 272560 CDS YP_112331.1 53723346 3094996 complement(3141712..3143346) 1 NC_006351.1 Similar to internal regions of Streptomyces avermitilis modular polyketide synthase PteA1 SWALL:Q93H87 (EMBL:AB070949) (6048 aa) fasta scores: E(): 2e-14, 28.35% id in 529 aa, and to Streptomyces venezuelae type I polyketide synthase PikAI SWALL:Q9ZGI5 (EMBL:AF079138) (4613 aa) fasta scores: E(): 3e-13, 27.83% id in 521 aa; acyl transferase 3143346 3094996 BPSS2329 Burkholderia pseudomallei K96243 acyl transferase YP_112331.1 3141712 R 272560 CDS YP_112332.1 53723347 3094894 3143858..3146491 1 NC_006351.1 Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsp0362 or rs00775 SWALL:Q8XSV5 (EMBL:AL646078) (805 aa) fasta scores: E(): 2.2e-07, 24.28% id in 873 aa. C-terminal region is similar to Zymomonas mobilis hypothetical protein SWALL:O69016 (EMBL:AF086791) (169 aa) fasta scores: E(): 1.1e-25, 55.28% id in 161 aa; hypothetical protein 3146491 3094894 BPSS2330 Burkholderia pseudomallei K96243 hypothetical protein YP_112332.1 3143858 D 272560 CDS YP_112333.1 53723348 3094895 3146484..3147467 1 NC_006351.1 Similar to Ralstonia solanacearum probable lipoprotein precursor rsc2959 or rs01340 SWALL:Q8XV72 (EMBL:AL646072) (269 aa) fasta scores: E(): 2e-29, 48.99% id in 249 aa, and to Pseudomonas aeruginosa hypothetical protein pa2800 SWALL:Q9I043 (EMBL:AE004707) (234 aa) fasta scores: E(): 3.9e-20, 40.69% id in 231 aa. CDS is extended at the C-terminus in comparison to orthologues; lipoprotein 3147467 3094895 BPSS2331 Burkholderia pseudomallei K96243 lipoprotein YP_112333.1 3146484 D 272560 CDS YP_112334.1 53723349 3095115 complement(3147703..3148251) 1 NC_006351.1 hypothetical protein 3148251 3095115 BPSS2332 Burkholderia pseudomallei K96243 hypothetical protein YP_112334.1 3147703 R 272560 CDS YP_112335.1 53723350 3095116 complement(3148295..3149641) 1 NC_006351.1 Similar to Bacillus sphaericus adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA SWALL:BIOA_BACSH (SWALL:P22805) (455 aa) fasta scores: E(): 1.3e-45, 33.48% id in 430 aa, and to Ralstonia solanacearum aminotransferase rsc0082 or rs02256 SWALL:Q8Y398 (EMBL:AL646057) (450 aa) fasta scores: E(): 3.7e-128, 73.03% id in 445 aa; hypothetical protein 3149641 3095116 BPSS2333 Burkholderia pseudomallei K96243 hypothetical protein YP_112335.1 3148295 R 272560 CDS YP_112336.1 53723351 3094903 complement(3149638..3150708) 1 NC_006351.1 Weakly similar to Penicillium chrysogenum acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase precursor Aat or pendE SWALL:AAAA_PENCH (SWALL:P15802) (357 aa) fasta scores: E(): 1.5e-07, 26.45% id in 344 aa. Similar to Ralstonia solanacearum hypothetical protein rsc1742 rsc1742 or rs02930 SWALL:Q8XYL6 (EMBL:AL646066) (350 aa) fasta scores: E(): 1.1e-52, 47.73% id in 331 aa; hypothetical protein 3150708 3094903 BPSS2334 Burkholderia pseudomallei K96243 hypothetical protein YP_112336.1 3149638 R 272560 CDS YP_112337.1 53723352 3095798 complement(3150721..3151443) 1 NC_006351.1 similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein 3151443 glnQ 3095798 glnQ Burkholderia pseudomallei K96243 glutamine ABC transporter ATP-binding protein YP_112337.1 3150721 R 272560 CDS YP_112338.1 53723353 3095377 complement(3151446..3152102) 1 NC_006351.1 similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 3152102 glnP 3095377 glnP Burkholderia pseudomallei K96243 glutamine ABC transporter permease YP_112338.1 3151446 R 272560 CDS YP_112339.1 53723354 3095223 complement(3152167..3152919) 1 NC_006351.1 similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein 3152919 glnH 3095223 glnH Burkholderia pseudomallei K96243 glutamine ABC transporter periplasmic protein YP_112339.1 3152167 R 272560 CDS YP_112340.1 53723355 3094988 complement(3153366..3154073) 1 NC_006351.1 Weakly similar to Synechocystis sp. hypothetical protein slr1977 SWALL:P74128 (EMBL:D90912) (244 aa) fasta scores: E(): 0.0058, 25.86% id in 232 aa; hypothetical protein 3154073 3094988 BPSS2338 Burkholderia pseudomallei K96243 hypothetical protein YP_112340.1 3153366 R 272560 CDS YP_112341.1 53723356 3095684 complement(3154080..3156053) 1 NC_006351.1 Similar to Zymomonas mobilis squalene--hopene cyclase Shc SWALL:SQHC_ZYMMO (SWALL:P33990) (658 aa) fasta scores: E(): 7.5e-169, 62.28% id in 647 aa, and to Rhodopseudomonas palustris squalene-hopene cyclase Shc SWALL:O69790 (EMBL:Y09979) (654 aa) fasta scores: E(): 1.7e-182, 66.19% id in 639 aa; squalene--hopene cyclase 3156053 shc 3095684 shc Burkholderia pseudomallei K96243 squalene--hopene cyclase YP_112341.1 3154080 R 272560 CDS YP_112342.1 53723357 3094989 complement(3156381..3157229) 1 NC_006351.1 Similar to the C-terminal region of Capsicum annuum phytoene synthase, chloroplast precursor PSY1 SWALL:PSY_CAPAN (SWALL:P37272) (419 aa) fasta scores: E(): 8.8e-16, 32.72% id in 272 aa, and the full length to Bradyrhizobium japonicum hypothetical protein SWALL:O06002 (EMBL:X86552) (279 aa) fasta scores: E(): 9.1e-55, 55.84% id in 265 aa; squalene/phytoene synthase 3157229 3094989 BPSS2340 Burkholderia pseudomallei K96243 squalene/phytoene synthase YP_112342.1 3156381 R 272560 CDS YP_112343.1 53723358 3095087 3157746..3158651 1 NC_006351.1 Similar to Burkholderia gladioli esterase EstC SWALL:Q9LAB8 (EMBL:AF144381) (298 aa) fasta scores: E(): 2.3e-65, 64.78% id in 284 aa, and to Oryza sativa PIR7B protein SWALL:PI7B_ORYSA (SWALL:Q43360) (268 aa) fasta scores: E(): 2.3e-05, 29.43% id in 299 aa; esterase 3158651 estC 3095087 estC Burkholderia pseudomallei K96243 esterase YP_112343.1 3157746 D 272560 CDS YP_112344.1 53723359 3097039 complement(3158698..3159633) 1 NC_006351.1 Similar to the C-terminal region of Thermoanaerobacter tengcongensis diguanylate cyclase/phosphodiesterase domain 1 tte1100 SWALL:Q8RAU5 (EMBL:AE013073) (670 aa) fasta scores: E(): 8e-21, 32.66% id in 300 aa. C-terminus is similar to the C-terminal region of Agrobacterium tumefaciens GGDEF family protein ATU2179 or AGR_C_3960 SWALL:Q8UDE8 (EMBL:AE009168) (400 aa) fasta scores: E(): 3.1e-22, 34.67% id in 274 aa; hypothetical protein 3159633 3097039 BPSS2342 Burkholderia pseudomallei K96243 hypothetical protein YP_112344.1 3158698 R 272560 CDS YP_112345.1 53723360 3097040 complement(3159630..3160241) 1 NC_006351.1 Weakly similar to Vibrio cholerae hypothetical protein vc1083 SWALL:Q9KT22 (EMBL:AE004189) (194 aa) fasta scores: E(): 1.3e-08, 29.55% id in 203 aa, and to Bacillus halodurans inhibition of CheR-mediated methylation of MCPs bh2434 SWALL:Q9KA56 (EMBL:AP001515) (209 aa) fasta scores: E(): 0.017, 25.11% id in 211 aa. Possible C-terminal portion of a pseudogene. CDS is similar to the C-terminal regions of larger proteins, including Vibrio cholerae response regulator vca0189 SWALL:Q9KMX7 (EMBL:AE004359) (334 aa) fasta scores: E(): 4.5e-12, 29.79% id in 198 aa. Upstream CDS, BPSS2344, is similar to the N-terminal regions of the same proteins; hypothetical protein 3160241 3097040 BPSS2343 Burkholderia pseudomallei K96243 hypothetical protein YP_112345.1 3159630 R 272560 CDS YP_112346.1 53723361 3094944 complement(3160246..3160614) 1 NC_006351.1 Similar to Listeria monocytogenes, and Listeria innocua chemotaxis protein lmo0691 or lin0699 SWALL:CHEY_LISMO (SWALL:Q48767) (119 aa) fasta scores: E(): 5e-06, 33.33% id in 117 aa, and to Vibrio cholerae response regulator vc1082 SWALL:Q9KT23 (EMBL:AE004189) (121 aa) fasta scores: E(): 7.6e-20, 50.83% id in 120 aa. Possible N-terminal portion of a pseudogene. CDS is also similar to the N-terminal regions of larger proteins, including Vibrio cholerae response regulator vca0189 SWALL:Q9KMX7 (EMBL:AE004359) (334 aa) fasta scores: E(): 8.1e-16, 43.96% id in 116 aa. Downstream CDS, BPSS2343, is similar to the C-terminal regions of the same proteins. Similar to BPSS0814, 62.810% identity (62.810% ungapped) in 121 aa overlap; response regulator protein 3160614 3094944 BPSS2344 Burkholderia pseudomallei K96243 response regulator protein YP_112346.1 3160246 R 272560 CDS YP_112347.1 53723362 3094945 3161120..3163402 1 NC_006351.1 No significant database matches to the full length CDS. C-terminus is similar to the C-terminal regions of Brucella melitensis sensory transduction protein kinase bmei0947 SWALL:Q8YH57 (EMBL:AE009535) (767 aa) fasta scores: E(): 1.7e-39, 35.64% id in 418 aa, and Caulobacter crescentus sensory box histidine kinase/response regulator cc2874 SWALL:Q9A4G0 (EMBL:AE005952) (794 aa) fasta scores: E(): 1.6e-34, 33.82% id in 541 aa. Possible alternative translational start site; sensory kinase 3163402 3094945 BPSS2345 Burkholderia pseudomallei K96243 sensory kinase YP_112347.1 3161120 D 272560 CDS YP_112348.1 53723363 3095142 complement(3163794..3164351) 1 NC_006351.1 Similar to Xanthomonas campestris hypothetical protein xcc1433 SWALL:AAM40730 (EMBL:AE012243) (184 aa) fasta scores: E(): 7.5e-36, 55.8% id in 181 aa, and to Chlorobium tepidum hypothetical protein ct1462 SWALL:AAM72690 (EMBL:AE012903) (187 aa) fasta scores: E(): 2.1e-35, 56.28% id in 183 aa; hypothetical protein 3164351 3095142 BPSS2346 Burkholderia pseudomallei K96243 hypothetical protein YP_112348.1 3163794 R 272560 CDS YP_112349.1 53723364 3095303 3164715..3165320 1 NC_006351.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 3165320 3095303 BPSS2347 Burkholderia pseudomallei K96243 RNA polymerase sigma factor YP_112349.1 3164715 D 272560 CDS YP_112350.1 53723365 3095304 3165301..3165498 1 NC_006351.1 Similar to Ralstonia solanacearum hypothetical protein rsc0035 or rs01858 SWALL:Q8Y3E5 (EMBL:AL646057) (65 aa) fasta scores: E(): 3.7e-06, 45.16% id in 62 aa, and to Neisseria meningitidis hypothetical protein nmb2145 SWALL:Q9JXA7 (EMBL:AE002562) (59 aa) fasta scores: E(): 0.0052, 34% id in 50 aa; hypothetical protein 3165498 3095304 BPSS2347a Burkholderia pseudomallei K96243 hypothetical protein YP_112350.1 3165301 D 272560 CDS YP_112351.1 53723366 3095275 complement(3165814..3166170) 1 NC_006351.1 Similar to Escherichia coli, and Shigella flexneri arsenate reductase ArsC or ArsG SWALL:ARSC_ECOLI (SWALL:P37311) (141 aa) fasta scores: E(): 7.5e-12, 41.07% id in 112 aa, and to Vibrio cholerae arsenate reductase vc2165 SWALL:Q9KQ39 (EMBL:AE004288) (116 aa) fasta scores: E(): 2.3e-17, 53.98% id in 113 aa. CDS is truncated at the C-terminus in comparison to some orthologues; arsenate reductase 3166170 3095275 BPSS2348 Burkholderia pseudomallei K96243 arsenate reductase YP_112351.1 3165814 R 272560 CDS YP_112352.1 53723367 3095276 3166744..3167406 1 NC_006351.1 Similar to Ralstonia solanacearum probable partition protein rsp0003 or rs01975 SWALL:Q8XTV1 (EMBL:AL646076) (222 aa) fasta scores: E(): 8.1e-26, 38.18% id in 220 aa, and to Chlorobium limicola hypothetical protein Hyp7H SWALL:P94650 (EMBL:U77780) (209 aa) fasta scores: E(): 1.4e-19, 34.43% id in 212 aa; partition protein ParA 3167406 3095276 BPSS2349 Burkholderia pseudomallei K96243 partition protein ParA YP_112352.1 3166744 D 272560 CDS YP_112353.1 53723368 3095380 3167431..3168498 1 NC_006351.1 C-terminal region is similar to the C-terminal region of Ralstonia solanacearum partitioning protein rsp0004 or rs01976 SWALL:Q8XTV0 (EMBL:AL646076) (334 aa) fasta scores: E(): 2.6e-19, 31.06% id in 264 aa, and to the full length Bacillus subtilis stage 0 sporulation protein J Spo0J SWALL:SP0J_BACSU (SWALL:P26497) (282 aa) fasta scores: E(): 4.4e-06, 24.35% id in 271 aa; partitioning protein ParB 3168498 3095380 BPSS2350 Burkholderia pseudomallei K96243 partitioning protein ParB YP_112353.1 3167431 D 272560 CDS YP_112354.1 53723369 3095381 complement(3168589..3170031) 1 NC_006351.1 Similar to Paracoccus versutus replication protein Rep SWALL:Q8VS80 (EMBL:AF390867) (419 aa) fasta scores: E(): 1e-08, 26.81% id in 440 aa. C-terminal region is weakly similar to Coxiella burnetii hypothetical protein SWALL:Q9S6J8 (EMBL:AF131076) (433 aa) fasta scores: E(): 7.6e-08, 21.42% id in 448 aa; replication protein 3170031 3095381 BPSS2351 Burkholderia pseudomallei K96243 replication protein YP_112354.1 3168589 R 272560 CDS