-- dump date 20140619_014426 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 398527000001 SEQ_END SEQ_END NC_010676.1 3625999 3625999 DR NC_010676.1; contig end 3625999..3625999 Burkholderia phytofirmans PsJN 398527000002 SEQ_END SEQ_END NC_010679.1 121122 121122 DR NC_010679.1; contig end 121122..121122 Burkholderia phytofirmans PsJN 398527000003 SEQ_END SEQ_END NC_010681.1 4467537 4467537 DR NC_010681.1; contig end 4467537..4467537 Burkholderia phytofirmans PsJN YP_001887746.1 CDS Bphyt_3990 NC_010676.1 270 479 R KEGG: bxe:Bxe_B0463 hypothetical protein; hypothetical protein complement(270..479) Burkholderia phytofirmans PsJN 6279301 YP_001887747.1 CDS Bphyt_3991 NC_010676.1 663 947 R KEGG: bxe:Bxe_B0448 hypothetical protein; hypothetical protein complement(663..947) Burkholderia phytofirmans PsJN 6278024 YP_001887748.1 CDS Bphyt_3992 NC_010676.1 1036 1314 R KEGG: bxe:Bxe_B0465 hypothetical protein; hypothetical protein complement(1036..1314) Burkholderia phytofirmans PsJN 6277937 YP_001887749.1 CDS Bphyt_3993 NC_010676.1 1730 3865 D PFAM: protein of unknown function RIO1; Serine/threonine protein kinase-related; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bxe:Bxe_B0466 serine/threonine protein kinase; serine/threonine protein kinase 1730..3865 Burkholderia phytofirmans PsJN 6277880 YP_001887750.1 CDS Bphyt_3994 NC_010676.1 3938 5911 R PFAM: protein of unknown function DUF323; peptidase C14 caspase catalytic subunit p20; KEGG: bxe:Bxe_B0467 hypothetical protein; hypothetical protein complement(3938..5911) Burkholderia phytofirmans PsJN 6277990 YP_001887751.1 CDS Bphyt_3995 NC_010676.1 6280 6783 D KEGG: bxe:Bxe_B0468 hypothetical protein; hypothetical protein 6280..6783 Burkholderia phytofirmans PsJN 6278152 YP_001887752.1 CDS Bphyt_3996 NC_010676.1 6831 7265 D KEGG: bxe:Bxe_B0469 hypothetical protein; hypothetical protein 6831..7265 Burkholderia phytofirmans PsJN 6277996 YP_001887753.1 CDS Bphyt_3997 NC_010676.1 7569 7850 D KEGG: bxe:Bxe_B0470 hypothetical protein; hypothetical protein 7569..7850 Burkholderia phytofirmans PsJN 6277875 YP_001887754.1 CDS Bphyt_3998 NC_010676.1 8076 9530 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B0471 ABC efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 8076..9530 Burkholderia phytofirmans PsJN 6278280 YP_001887755.1 CDS Bphyt_3999 NC_010676.1 9760 12342 D PFAM: Forkhead-associated protein; KEGG: bxe:Bxe_B0472 putative forkhead-associated protein; FHA domain-containing protein 9760..12342 Burkholderia phytofirmans PsJN 6277900 YP_001887756.1 CDS Bphyt_4000 NC_010676.1 12320 13693 D PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B0473 ABC efflux pump, membrane fusion protein, HlyD subfamily; secretion protein HlyD family protein 12320..13693 Burkholderia phytofirmans PsJN 6278267 YP_001887757.1 CDS Bphyt_4001 NC_010676.1 13731 14483 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bxe:Bxe_B0474 putative peptidyl-prolyl isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 13731..14483 Burkholderia phytofirmans PsJN 6277902 YP_001887758.1 CDS Bphyt_4002 NC_010676.1 14550 17606 D PFAM: cyclic nucleotide-binding; ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bxe:Bxe_B0475 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter, fused ATPase and inner membrane subunits; cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter 14550..17606 Burkholderia phytofirmans PsJN 6277873 YP_001887759.1 CDS Bphyt_4003 NC_010676.1 17606 18961 D PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_B0476 sigma54 specific transcriptional regulator with PAS sensor, fis family; sigma-54 specific transcriptional regulator 17606..18961 Burkholderia phytofirmans PsJN 6278001 YP_001887760.1 CDS Bphyt_4004 NC_010676.1 18986 19756 R PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: bxe:Bxe_B0477 protein serine/threonine phosphatases; protein serine/threonine phosphatase complement(18986..19756) Burkholderia phytofirmans PsJN 6277948 YP_001887761.1 CDS Bphyt_4005 NC_010676.1 19762 20049 R KEGG: bxe:Bxe_B0478 hypothetical protein; hypothetical protein complement(19762..20049) Burkholderia phytofirmans PsJN 6277910 YP_001887762.1 CDS Bphyt_4006 NC_010676.1 20520 21017 D KEGG: bxe:Bxe_B0479 hypothetical protein; hypothetical protein 20520..21017 Burkholderia phytofirmans PsJN 6277755 YP_001887763.1 CDS Bphyt_4007 NC_010676.1 21085 21342 D KEGG: bxe:Bxe_B0480 hypothetical protein; hypothetical protein 21085..21342 Burkholderia phytofirmans PsJN 6278278 YP_001887764.1 CDS Bphyt_4008 NC_010676.1 21339 22217 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0481 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(21339..22217) Burkholderia phytofirmans PsJN 6278097 YP_001887765.1 CDS Bphyt_4009 NC_010676.1 22318 23265 D PFAM: beta-lactamase; KEGG: rpa:RPA0362 putative class A beta-lactamase precursor (penicillinase); beta-lactamase 22318..23265 Burkholderia phytofirmans PsJN 6277970 YP_001887766.1 CDS Bphyt_4010 NC_010676.1 23311 23556 D KEGG: sus:Acid_4229 hypothetical protein; hypothetical protein 23311..23556 Burkholderia phytofirmans PsJN 6277882 YP_001887767.1 CDS Bphyt_4011 NC_010676.1 23615 24631 R PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: bxe:Bxe_B0482 potassium-tellurite ethidium and proflavin transporter; potassium-tellurite ethidium and proflavin transporter complement(23615..24631) Burkholderia phytofirmans PsJN 6277877 YP_001887768.1 CDS Bphyt_4012 NC_010676.1 24912 25676 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bch:Bcen2424_5466 transcriptional regulator, IclR family; IclR family transcriptional regulator 24912..25676 Burkholderia phytofirmans PsJN 6280310 YP_001887769.1 CDS Bphyt_4013 NC_010676.1 25706 26530 R KEGG: reu:Reut_B4959 citrate synthase; citrate synthase complement(25706..26530) Burkholderia phytofirmans PsJN 6280160 YP_001887770.1 CDS Bphyt_4014 NC_010676.1 26533 27732 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B2210 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F complement(26533..27732) Burkholderia phytofirmans PsJN 6279769 YP_001887771.1 CDS Bphyt_4015 NC_010676.1 27774 29207 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_5007 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(27774..29207) Burkholderia phytofirmans PsJN 6279828 YP_001887772.1 CDS Bphyt_4016 NC_010676.1 29413 29763 R PFAM: response regulator receiver; KEGG: bxe:Bxe_B0483 response regulator receiver domain protein(CheY); response regulator receiver protein complement(29413..29763) Burkholderia phytofirmans PsJN 6277893 YP_001887773.1 CDS Bphyt_4017 NC_010676.1 29770 31245 R PFAM: KaiA binding; KEGG: bxe:Bxe_B0484 RAD55; Non-specific serine/threonine protein kinase complement(29770..31245) Burkholderia phytofirmans PsJN 6279381 YP_001887774.1 CDS Bphyt_4018 NC_010676.1 31599 33332 R PFAM: Tannase and feruloyl esterase; KEGG: bvi:Bcep1808_3848 feruloyl esterase; feruloyl esterase complement(31599..33332) Burkholderia phytofirmans PsJN 6279445 YP_001887775.1 CDS Bphyt_4019 NC_010676.1 33343 34482 R PFAM: porin Gram-negative type; KEGG: bvi:Bcep1808_3847 porin, gram-negative type; porin complement(33343..34482) Burkholderia phytofirmans PsJN 6279814 YP_001887776.1 CDS Bphyt_4020 NC_010676.1 34544 35791 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5633 putative 3-hydroxyphenylpropionic transporter MhpT; 3-hydroxyphenylpropionic transporter MhpT complement(34544..35791) Burkholderia phytofirmans PsJN 6280406 YP_001887777.1 CDS Bphyt_4021 NC_010676.1 36123 36623 R PFAM: regulatory protein MarR; KEGG: bpd:BURPS668_A1140 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(36123..36623) Burkholderia phytofirmans PsJN 6280057 YP_001887778.1 CDS Bphyt_4022 NC_010676.1 36761 37588 D catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA; p-hydroxycinnamoyl CoA hydratase/lyase 36761..37588 Burkholderia phytofirmans PsJN 6277816 YP_001887779.1 CDS Bphyt_4023 NC_010676.1 37670 39121 D PFAM: Aldehyde Dehydrogenase_; KEGG: bvi:Bcep1808_3842 aldehyde dehydrogenase; aldehyde dehydrogenase 37670..39121 Burkholderia phytofirmans PsJN 6279273 YP_001887780.1 CDS Bphyt_4024 NC_010676.1 39158 41059 D catalyzes the conversion of ferulic acid to feruloyl-CoA; feruloyl-CoA synthase 39158..41059 Burkholderia phytofirmans PsJN 6280292 YP_001887781.1 CDS Bphyt_4025 NC_010676.1 41099 41983 D PFAM: amidohydrolase 2; KEGG: bvi:Bcep1808_3840 amidohydrolase 2; amidohydrolase 2 41099..41983 Burkholderia phytofirmans PsJN 6280342 YP_001887782.1 CDS Bphyt_4026 NC_010676.1 42010 43176 D PFAM: Squalene/phytoene synthase; KEGG: bxe:Bxe_B0485 squalene/phytoene synthase family protein; squalene/phytoene synthase 42010..43176 Burkholderia phytofirmans PsJN 6280153 YP_001887783.1 CDS Bphyt_4027 NC_010676.1 43294 43542 D KEGG: bxe:Bxe_B0487 hypothetical protein; hypothetical protein 43294..43542 Burkholderia phytofirmans PsJN 6280148 YP_001887784.1 CDS Bphyt_4028 NC_010676.1 43885 44202 R KEGG: bxe:Bxe_B0489 hypothetical protein; hypothetical protein complement(43885..44202) Burkholderia phytofirmans PsJN 6279316 YP_001887785.1 CDS Bphyt_4029 NC_010676.1 44430 45122 R KEGG: bxe:Bxe_B0490 hypothetical protein; hypothetical protein complement(44430..45122) Burkholderia phytofirmans PsJN 6280265 YP_001887786.1 CDS Bphyt_4030 NC_010676.1 45122 45604 R PFAM: protein of unknown function DUF847; KEGG: bxe:Bxe_B0491 hypothetical protein; hypothetical protein complement(45122..45604) Burkholderia phytofirmans PsJN 6280295 YP_001887787.1 CDS Bphyt_4031 NC_010676.1 45686 47119 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_B0492 putative TPR repeat protein; hypothetical protein complement(45686..47119) Burkholderia phytofirmans PsJN 6280192 YP_001887788.1 CDS Bphyt_4032 NC_010676.1 47455 47721 R KEGG: bur:Bcep18194_B0663 hypothetical protein; hypothetical protein complement(47455..47721) Burkholderia phytofirmans PsJN 6280084 YP_001887789.1 CDS Bphyt_4033 NC_010676.1 48178 49041 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0493 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(48178..49041) Burkholderia phytofirmans PsJN 6280107 YP_001887790.1 CDS Bphyt_4034 NC_010676.1 49058 49852 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0494 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit; ABC transporter-like protein complement(49058..49852) Burkholderia phytofirmans PsJN 6280030 YP_001887791.1 CDS Bphyt_4035 NC_010676.1 49893 50912 R KEGG: bxe:Bxe_B0495 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein; ABC nitrate/sulfonate/bicarbonate family transporter periplasmic ligand binding protein complement(49893..50912) Burkholderia phytofirmans PsJN 6280043 YP_001887792.1 CDS Bphyt_4036 NC_010676.1 51162 51839 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B0496 two component transcriptional regulator, winged helix family; two component winged helix family transcriptional regulator 51162..51839 Burkholderia phytofirmans PsJN 6279942 YP_001887793.1 CDS Bphyt_4037 NC_010676.1 51829 53223 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bxe:Bxe_B0497 histidine kinase; histidine kinase 51829..53223 Burkholderia phytofirmans PsJN 6277684 YP_001887794.1 CDS Bphyt_4038 NC_010676.1 53349 54419 D PFAM: NMT1/THI5 like domain protein; KEGG: bpd:BURPS668_0038 hypothetical protein; NMT1/THI5 like domain-containing protein 53349..54419 Burkholderia phytofirmans PsJN 6278854 YP_001887795.1 CDS Bphyt_4039 NC_010676.1 54486 55868 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bpd:BURPS668_0041 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 54486..55868 Burkholderia phytofirmans PsJN 6277862 YP_001887796.1 CDS Bphyt_4040 NC_010676.1 55894 56592 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmu:Bmul_0032 two component transcriptional regulator, winged helix family; two component winged helix family transcriptional regulator 55894..56592 Burkholderia phytofirmans PsJN 6280341 YP_001887797.1 CDS Bphyt_4041 NC_010676.1 56775 57899 D PFAM: porin Gram-negative type; KEGG: bps:BPSL0041 outer membrane porin lipoprotein precursor; porin 56775..57899 Burkholderia phytofirmans PsJN 6280376 YP_001887798.1 CDS Bphyt_4043 NC_010676.1 58278 58511 D KEGG: bps:BPSL1298 hypothetical protein; hypothetical protein 58278..58511 Burkholderia phytofirmans PsJN 6280374 YP_001887799.1 CDS Bphyt_4045 NC_010676.1 59188 60105 D PFAM: EAL domain protein; KEGG: bxe:Bxe_B0499 putative diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 59188..60105 Burkholderia phytofirmans PsJN 6280008 YP_001887800.1 CDS Bphyt_4046 NC_010676.1 60302 61030 R KEGG: bxe:Bxe_B0500 glycosyl transferase WecB/TagA/CpsF; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(60302..61030) Burkholderia phytofirmans PsJN 6279723 YP_001887801.1 CDS Bphyt_4047 NC_010676.1 61098 62264 R KEGG: bxe:Bxe_B0501 hypothetical protein; hypothetical protein complement(61098..62264) Burkholderia phytofirmans PsJN 6279271 YP_001887802.1 CDS Bphyt_4048 NC_010676.1 62261 63058 R KEGG: bxe:Bxe_B2249 hypothetical protein; hypothetical protein complement(62261..63058) Burkholderia phytofirmans PsJN 6279919 YP_001887803.1 CDS Bphyt_4049 NC_010676.1 63055 64146 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_B0503 putative glycosyltransferase; group 1 glycosyl transferase complement(63055..64146) Burkholderia phytofirmans PsJN 6280163 YP_001887804.1 CDS Bphyt_4050 NC_010676.1 64143 65402 R KEGG: bxe:Bxe_B0504 hypothetical protein; hypothetical protein complement(64143..65402) Burkholderia phytofirmans PsJN 6280201 YP_001887805.1 CDS Bphyt_4051 NC_010676.1 65399 66730 R KEGG: bxe:Bxe_B0505 hypothetical protein; hypothetical protein complement(65399..66730) Burkholderia phytofirmans PsJN 6280123 YP_001887806.1 CDS wecC NC_010676.1 66730 67968 R catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase complement(66730..67968) Burkholderia phytofirmans PsJN 6280137 YP_001887807.1 CDS Bphyt_4053 NC_010676.1 68137 70359 R KEGG: bxe:Bxe_B0507 exopolysaccharide transport protein/putative tyrosine protein kinase; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; exopolysaccharide transport protein family protein complement(68137..70359) Burkholderia phytofirmans PsJN 6280333 YP_001887808.1 CDS Bphyt_4054 NC_010676.1 70416 70868 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bxe:Bxe_B0508 protein tyrosine phosphatase; protein tyrosine phosphatase complement(70416..70868) Burkholderia phytofirmans PsJN 6278782 YP_001887809.1 CDS Bphyt_4055 NC_010676.1 70865 72037 R PFAM: polysaccharide export protein; KEGG: bxe:Bxe_B0509 putative polysaccharide export, outer membrane protein, EpsA; polysaccharide export protein complement(70865..72037) Burkholderia phytofirmans PsJN 6280241 YP_001887810.1 CDS Bphyt_4056 NC_010676.1 72169 73584 R TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bxe:Bxe_B0510 undecaprenyl-phosphate galactosephosphotransferase; undecaprenyl-phosphate glucose phosphotransferase complement(72169..73584) Burkholderia phytofirmans PsJN 6278610 YP_001887811.1 CDS Bphyt_4057 NC_010676.1 74659 74976 R KEGG: bxe:Bxe_A3353 hypothetical protein; hypothetical protein complement(74659..74976) Burkholderia phytofirmans PsJN 6278584 YP_001887812.1 CDS Bphyt_4058 NC_010676.1 75390 76658 R KEGG: bxe:Bxe_B0515 hypothetical protein; hypothetical protein complement(75390..76658) Burkholderia phytofirmans PsJN 6279753 YP_001887813.1 CDS Bphyt_4059 NC_010676.1 76739 77755 R KEGG: bxe:Bxe_B0516 putative lipoprotein; lipoprotein complement(76739..77755) Burkholderia phytofirmans PsJN 6278865 YP_001887814.1 CDS Bphyt_4060 NC_010676.1 77907 78833 D KEGG: bpl:BURPS1106A_A2683 hypothetical protein; hypothetical protein 77907..78833 Burkholderia phytofirmans PsJN 6278602 YP_001887815.1 CDS Bphyt_4061 NC_010676.1 78863 80026 R PFAM: iron-containing alcohol dehydrogenase; KEGG: bcm:Bcenmc03_3517 alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(78863..80026) Burkholderia phytofirmans PsJN 6279145 YP_001887816.1 CDS Bphyt_4062 NC_010676.1 80023 80331 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rme:Rmet_5441 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(80023..80331) Burkholderia phytofirmans PsJN 6280309 YP_001887817.1 CDS Bphyt_4063 NC_010676.1 80806 81477 D RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease; extracytoplasmic-function sigma-70 factor 80806..81477 Burkholderia phytofirmans PsJN 6279115 YP_001887818.1 CDS Bphyt_4064 NC_010676.1 81606 81845 D PFAM: MbtH domain protein; KEGG: bxe:Bxe_B0518 hypothetical protein; MbtH domain-containing protein 81606..81845 Burkholderia phytofirmans PsJN 6279377 YP_001887819.1 CDS Bphyt_4065 NC_010676.1 81933 82967 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bxe:Bxe_B0519 hypothetical protein; taurine catabolism dioxygenase tauD/tfdA 81933..82967 Burkholderia phytofirmans PsJN 6279650 YP_001887820.1 CDS Bphyt_4066 NC_010676.1 82964 83830 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0520 ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit; ABC transporter-like protein 82964..83830 Burkholderia phytofirmans PsJN 6279928 YP_001887821.1 CDS Bphyt_4067 NC_010676.1 83827 85935 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 83827..85935 Burkholderia phytofirmans PsJN 6280436 YP_001887822.1 CDS Bphyt_4068 NC_010676.1 85932 86750 D KEGG: bxe:Bxe_B0522 putative iron reductase; iron reductase 85932..86750 Burkholderia phytofirmans PsJN 6279298 YP_001887823.1 CDS Bphyt_4069 NC_010676.1 86828 87856 D PFAM: periplasmic binding protein; KEGG: bxe:Bxe_B0523 ABC Fe3+-hydroxamate transporter, periplasmic ligand binding protein; periplasmic binding protein 86828..87856 Burkholderia phytofirmans PsJN 6280024 YP_001887824.1 CDS Bphyt_4070 NC_010676.1 87949 88236 R KEGG: bvi:Bcep1808_3442 DGPFAETKE family protein; hypothetical protein complement(87949..88236) Burkholderia phytofirmans PsJN 6278553 YP_001887825.1 CDS Bphyt_4071 NC_010676.1 88236 90002 R KEGG: bxe:Bxe_B0524 ABC cyclic peptide efflux pump, fused ATPase and inner membrane subunits; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; SMART: AAA ATPase; cyclic peptide transporter complement(88236..90002) Burkholderia phytofirmans PsJN 6278874 YP_001887826.1 CDS Bphyt_4072 NC_010676.1 90294 99986 D TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bxe:Bxe_B0525 non-ribosomal peptide synthase; amino acid adenylation domain-containing protein 90294..99986 Burkholderia phytofirmans PsJN 6278931 YP_001887827.1 CDS Bphyt_4073 NC_010676.1 100021 105045 D TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bxe:Bxe_B0526 non-ribosomal peptide synthetase; amino acid adenylation domain-containing protein 100021..105045 Burkholderia phytofirmans PsJN 6278577 YP_001887828.1 CDS Bphyt_4074 NC_010676.1 105179 106549 D KEGG: bxe:Bxe_B0527 L-ornithine 5-monooxygenase; L-ornithine 5-monooxygenase 105179..106549 Burkholderia phytofirmans PsJN 6278568 YP_001887829.1 CDS Bphyt_4075 NC_010676.1 106597 108834 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bpm:BURPS1710b_2091 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 106597..108834 Burkholderia phytofirmans PsJN 6278537 YP_001887830.1 CDS Bphyt_4076 NC_010676.1 108869 109711 D KEGG: bxe:Bxe_B0528 hypothetical protein; hypothetical protein 108869..109711 Burkholderia phytofirmans PsJN 6278649 YP_001887831.1 CDS Bphyt_4077 NC_010676.1 109779 111503 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0529 major facilitator superfamily (MFS) efflux pump; major facilitator superfamily protein complement(109779..111503) Burkholderia phytofirmans PsJN 6277960 YP_001887832.1 CDS Bphyt_4078 NC_010676.1 111631 112569 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0530 transcriptional regulator, LysR family; LysR family transcriptional regulator 111631..112569 Burkholderia phytofirmans PsJN 6279852 YP_001887833.1 CDS Bphyt_4079 NC_010676.1 112566 114749 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_B0531 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(112566..114749) Burkholderia phytofirmans PsJN 6280484 YP_001887834.1 CDS Bphyt_4080 NC_010676.1 115165 117393 D KEGG: bxe:Bxe_B0532 isocitrate dehydrogenase NADP-dependent, monomeric type; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; isocitrate dehydrogenase 115165..117393 Burkholderia phytofirmans PsJN 6277961 YP_001887835.1 CDS Bphyt_4081 NC_010676.1 117501 117731 R KEGG: bxe:Bxe_B0533 hypothetical protein; hypothetical protein complement(117501..117731) Burkholderia phytofirmans PsJN 6278677 YP_001887836.1 CDS Bphyt_4082 NC_010676.1 118124 118942 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0534 putative peroxidase; alpha/beta fold family hydrolase complement(118124..118942) Burkholderia phytofirmans PsJN 6278802 YP_001887837.1 CDS Bphyt_4083 NC_010676.1 119127 120515 R PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_1075 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(119127..120515) Burkholderia phytofirmans PsJN 6280256 YP_001887838.1 CDS Bphyt_4084 NC_010676.1 120657 122909 R PFAM: CoA-binding domain protein; ATP-grasp domain protein; KEGG: bpt:Bpet2987 acetyl-CoA synthetase; CoA-binding domain-containing protein complement(120657..122909) Burkholderia phytofirmans PsJN 6278645 YP_001887839.1 CDS Bphyt_4085 NC_010676.1 122918 124114 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_1816 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein complement(122918..124114) Burkholderia phytofirmans PsJN 6280059 YP_001887840.1 CDS Bphyt_4086 NC_010676.1 124279 125130 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bbr:BB4480 probable transcriptional regulator; IclR family transcriptional regulator 124279..125130 Burkholderia phytofirmans PsJN 6278555 YP_001887841.1 CDS Bphyt_4087 NC_010676.1 125233 126573 R KEGG: bxe:Bxe_B0535 hypothetical protein; hypothetical protein complement(125233..126573) Burkholderia phytofirmans PsJN 6280257 YP_001887842.1 CDS Bphyt_4088 NC_010676.1 126604 127098 R KEGG: bxe:Bxe_B0536 hypothetical protein; hypothetical protein complement(126604..127098) Burkholderia phytofirmans PsJN 6279213 YP_001887843.1 CDS Bphyt_4089 NC_010676.1 127277 128170 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4509 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(127277..128170) Burkholderia phytofirmans PsJN 6279855 YP_001887844.1 CDS Bphyt_4090 NC_010676.1 128270 129574 D TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; KEGG: bam:Bamb_1244 citrate/H+ symporter, CitMHS family; CitMHS family citrate/H+ symporter 128270..129574 Burkholderia phytofirmans PsJN 6280542 YP_001887845.1 CDS Bphyt_4091 NC_010676.1 129604 130962 D PFAM: protein of unknown function DUF1446; KEGG: bcm:Bcenmc03_1346 protein of unknown function DUF1446; hypothetical protein 129604..130962 Burkholderia phytofirmans PsJN 6279802 YP_001887846.1 CDS Bphyt_4092 NC_010676.1 130964 131278 D KEGG: bmu:Bmul_1927 hypothetical protein; hypothetical protein 130964..131278 Burkholderia phytofirmans PsJN 6279929 YP_001887847.1 CDS Bphyt_4093 NC_010676.1 131304 132338 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppw:PputW619_1688 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(131304..132338) Burkholderia phytofirmans PsJN 6279882 YP_001887848.1 CDS Bphyt_4094 NC_010676.1 132404 133672 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1021 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein 132404..133672 Burkholderia phytofirmans PsJN 6278742 YP_001887849.1 CDS Bphyt_4095 NC_010676.1 133904 135013 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gdi:GDI2773 putative N-ethylmaleimide reductase, FMN-linked; NADH:flavin oxidoreductase 133904..135013 Burkholderia phytofirmans PsJN 6278214 YP_001887850.1 CDS Bphyt_4096 NC_010676.1 135141 136067 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_3137 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(135141..136067) Burkholderia phytofirmans PsJN 6279450 YP_001887851.1 CDS Bphyt_4097 NC_010676.1 136177 136761 R PFAM: regulatory protein TetR; KEGG: bja:blr1086 transcriptional regulatory protein; TetR family transcriptional regulator complement(136177..136761) Burkholderia phytofirmans PsJN 6278721 YP_001887852.1 CDS Bphyt_4098 NC_010676.1 136840 137961 R PFAM: oxidoreductase domain protein; KEGG: sco:SCP1.239c putative oxidoreductase, mmyg; oxidoreductase domain-containing protein complement(136840..137961) Burkholderia phytofirmans PsJN 6278018 YP_001887853.1 CDS Bphyt_4099 NC_010676.1 138042 138788 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_3959 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(138042..138788) Burkholderia phytofirmans PsJN 6277698 YP_001887854.1 CDS Bphyt_4100 NC_010676.1 139047 139757 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: psb:Psyr_4228 regulatory protein, GntR:bacterial regulatory protein, GntR; GntR family transcriptional regulator complement(139047..139757) Burkholderia phytofirmans PsJN 6278135 YP_001887855.1 CDS Bphyt_4101 NC_010676.1 140181 141512 D PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_1091 major facilitator superfamily MFS_1; major facilitator superfamily protein 140181..141512 Burkholderia phytofirmans PsJN 6280129 YP_001887856.1 CDS Bphyt_4102 NC_010676.1 141645 142994 D TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bxe:Bxe_B0539 glucarate dehydratase; glucarate dehydratase 141645..142994 Burkholderia phytofirmans PsJN 6279024 YP_001887857.1 CDS Bphyt_4103 NC_010676.1 143071 143988 D catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase 143071..143988 Burkholderia phytofirmans PsJN 6278973 YP_001887858.1 CDS Bphyt_4104 NC_010676.1 144136 145692 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0540 major facilitator superfamily (MFS) multidrug efflux pump; EmrB/QacA subfamily drug resistance transporter complement(144136..145692) Burkholderia phytofirmans PsJN 6278803 YP_001887859.1 CDS Bphyt_4105 NC_010676.1 146078 146386 D KEGG: bam:Bamb_4557 hypothetical protein; hypothetical protein 146078..146386 Burkholderia phytofirmans PsJN 6280216 YP_001887860.1 CDS Bphyt_4106 NC_010676.1 146639 147094 R PFAM: dehydroquinase class II; KEGG: bja:blr1201 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase complement(146639..147094) Burkholderia phytofirmans PsJN 6279838 YP_001887861.1 CDS Bphyt_4107 NC_010676.1 147155 148531 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro08874 probable metabolite transporter, MFS superfamily; major facilitator superfamily protein complement(147155..148531) Burkholderia phytofirmans PsJN 6279938 YP_001887862.1 CDS Bphyt_4108 NC_010676.1 148770 149552 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pna:Pnap_2705 regulatory proteins, IclR; IclR family transcriptional regulator 148770..149552 Burkholderia phytofirmans PsJN 6279890 YP_001887863.1 CDS Bphyt_4109 NC_010676.1 149526 150632 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bmu:Bmul_1981 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(149526..150632) Burkholderia phytofirmans PsJN 6279711 YP_001887864.1 CDS Bphyt_4110 NC_010676.1 150684 151547 R PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bam:Bamb_3333 catechol 1,2-dioxygenase; hydroxyquinol 1,2-dioxygenase complement(150684..151547) Burkholderia phytofirmans PsJN 6279365 YP_001887865.1 CDS Bphyt_4111 NC_010676.1 151656 152333 R KEGG: bxe:Bxe_B0541 hypothetical protein; hypothetical protein complement(151656..152333) Burkholderia phytofirmans PsJN 6278784 YP_001887866.1 CDS Bphyt_4112 NC_010676.1 152561 153442 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; TrkA-N domain protein; NmrA family protein; Male sterility domain; KEGG: mrd:Mrad2831_0235 NmrA family protein; NmrA family protein complement(152561..153442) Burkholderia phytofirmans PsJN 6277696 YP_001887867.1 CDS Bphyt_4113 NC_010676.1 153559 154443 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mll0238 probable transcriptional regulator; LysR family transcriptional regulator 153559..154443 Burkholderia phytofirmans PsJN 6277742 YP_001887868.1 CDS Bphyt_4114 NC_010676.1 154499 155131 R KEGG: bxe:Bxe_B0542 hypothetical protein; hypothetical protein complement(154499..155131) Burkholderia phytofirmans PsJN 6277810 YP_001887869.1 CDS Bphyt_4115 NC_010676.1 155164 156384 R KEGG: bxe:Bxe_B0543 hypothetical protein; hypothetical protein complement(155164..156384) Burkholderia phytofirmans PsJN 6279892 YP_001887870.1 CDS Bphyt_4116 NC_010676.1 156492 157259 D PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bxe:Bxe_B0544 hypothetical protein; hypothetical protein 156492..157259 Burkholderia phytofirmans PsJN 6278558 YP_001887871.1 CDS Bphyt_4117 NC_010676.1 157460 159097 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bpd:BURPS668_A2780 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 157460..159097 Burkholderia phytofirmans PsJN 6277320 YP_001887872.1 CDS Bphyt_4118 NC_010676.1 159365 160393 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B0545 outer membrane porin, OmpC family; porin 159365..160393 Burkholderia phytofirmans PsJN 6277566 YP_001887873.1 CDS Bphyt_4119 NC_010676.1 160452 161798 R KEGG: bxe:Bxe_B2746 L-sorbosone dehydrogenase; L-sorbosone dehydrogenase complement(160452..161798) Burkholderia phytofirmans PsJN 6278197 YP_001887874.1 CDS Bphyt_4120 NC_010676.1 161992 162774 R KEGG: pna:Pnap_0632 hypothetical protein; hypothetical protein complement(161992..162774) Burkholderia phytofirmans PsJN 6277486 YP_001887875.1 CDS Bphyt_4121 NC_010676.1 163269 163976 D PFAM: dienelactone hydrolase; KEGG: bxe:Bxe_B0548 carboxymethylenebutenolidase; carboxymethylenebutenolidase 163269..163976 Burkholderia phytofirmans PsJN 6278205 YP_001887876.1 CDS Bphyt_4122 NC_010676.1 164104 164850 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0549 putative short-chain type dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(164104..164850) Burkholderia phytofirmans PsJN 6277645 YP_001887877.1 CDS Bphyt_4123 NC_010676.1 164916 165812 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0550 putative hydrolase, alpha/beta fold family; alpha/beta fold family hydrolase complement(164916..165812) Burkholderia phytofirmans PsJN 6278184 YP_001887878.1 CDS Bphyt_4124 NC_010676.1 166009 166908 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0551 transcriptional regulator, LysR family; LysR family transcriptional regulator 166009..166908 Burkholderia phytofirmans PsJN 6277581 YP_001887879.1 CDS Bphyt_4125 NC_010676.1 166985 168571 D KEGG: bxe:Bxe_B0552 hypothetical protein; hypothetical protein 166985..168571 Burkholderia phytofirmans PsJN 6277539 YP_001887880.1 CDS Bphyt_4126 NC_010676.1 168700 169302 R PFAM: phosphoesterase PA-phosphatase related; KEGG: bxe:Bxe_B0055 membrane-associated phospholipid phosphatase; PA-phosphatase-like phosphoesterase complement(168700..169302) Burkholderia phytofirmans PsJN 6278588 YP_001887881.1 CDS Bphyt_4127 NC_010676.1 169451 170692 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 169451..170692 Burkholderia phytofirmans PsJN 6278617 YP_001887882.1 CDS Bphyt_4128 NC_010676.1 170674 171555 D PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_3914 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 170674..171555 Burkholderia phytofirmans PsJN 6278652 YP_001887883.1 CDS Bphyt_4129 NC_010676.1 171643 171948 R KEGG: bxe:Bxe_B0555 hypothetical protein; hypothetical protein complement(171643..171948) Burkholderia phytofirmans PsJN 6278710 YP_001887884.1 CDS Bphyt_4130 NC_010676.1 172109 172741 R TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bxe:Bxe_B0556 methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(172109..172741) Burkholderia phytofirmans PsJN 6278754 YP_001887885.1 CDS Bphyt_4131 NC_010676.1 173034 174371 D SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; Protein kinase ATP binding, conserved site; KEGG: bxe:Bxe_B0557 serine/threonine protein kinase; serine/threonine protein kinase 173034..174371 Burkholderia phytofirmans PsJN 6278945 YP_001887886.1 CDS Bphyt_4132 NC_010676.1 174451 175440 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B0558 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator 174451..175440 Burkholderia phytofirmans PsJN 6279059 YP_001887887.1 CDS Bphyt_4133 NC_010676.1 175511 175942 R PFAM: PRC-barrel domain protein; KEGG: bxe:Bxe_B0559 hypothetical protein; PRC-barrel domain-containing protein complement(175511..175942) Burkholderia phytofirmans PsJN 6279222 YP_001887888.1 CDS Bphyt_4134 NC_010676.1 176204 177379 D PFAM: glycosyl transferase family 9; KEGG: bxe:Bxe_B0560 putative heptosyltransferase; glycosyl transferase 176204..177379 Burkholderia phytofirmans PsJN 6279112 YP_001887889.1 CDS Bphyt_4135 NC_010676.1 177481 177885 D PFAM: protein of unknown function DUF1486; KEGG: bxe:Bxe_B0561 hypothetical protein; hypothetical protein 177481..177885 Burkholderia phytofirmans PsJN 6280538 YP_001887890.1 CDS Bphyt_4136 NC_010676.1 177919 179145 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bja:blr2205 putative dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(177919..179145) Burkholderia phytofirmans PsJN 6278832 YP_001887891.1 CDS Bphyt_4137 NC_010676.1 179375 179836 D PFAM: regulatory protein MarR; KEGG: bcm:Bcenmc03_1671 transcriptional regulator, MarR family; MarR family transcriptional regulator 179375..179836 Burkholderia phytofirmans PsJN 6280507 YP_001887892.1 CDS Bphyt_4138 NC_010676.1 179969 180475 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(179969..180475) Burkholderia phytofirmans PsJN 6279342 YP_001887893.1 CDS Bphyt_4140 NC_010676.1 180638 180910 R KEGG: bxe:Bxe_A2488 hypothetical protein; hypothetical protein complement(180638..180910) Burkholderia phytofirmans PsJN 6280089 YP_001887894.1 CDS Bphyt_4141 NC_010676.1 180996 181421 R PFAM: OsmC family protein; KEGG: reh:H16_A1665 predicted redox protein, regulator of disulfide-bond formation; OsmC family protein complement(180996..181421) Burkholderia phytofirmans PsJN 6280019 YP_001887895.1 CDS Bphyt_4142 NC_010676.1 181701 182837 D KEGG: bxe:Bxe_B0563 hypothetical protein; hypothetical protein 181701..182837 Burkholderia phytofirmans PsJN 6278444 YP_001887896.1 CDS Bphyt_4143 NC_010676.1 182877 183788 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_1614 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(182877..183788) Burkholderia phytofirmans PsJN 6279077 YP_001887897.1 CDS Bphyt_4144 NC_010676.1 183954 185054 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: bur:Bcep18194_A4869 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 183954..185054 Burkholderia phytofirmans PsJN 6277678 YP_001887898.1 CDS Bphyt_4145 NC_010676.1 185095 185331 R PFAM: 4-oxalocrotonate tautomerase; KEGG: smd:Smed_3914 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(185095..185331) Burkholderia phytofirmans PsJN 6279553 YP_001887899.1 CDS Bphyt_4146 NC_010676.1 185392 186102 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1786 short-chain alcohol dehydrogenase of unknown specificity; short-chain dehydrogenase/reductase SDR complement(185392..186102) Burkholderia phytofirmans PsJN 6279922 YP_001887900.1 CDS Bphyt_4147 NC_010676.1 186321 187484 R PFAM: Patatin; KEGG: reu:Reut_A0386 patatin; patatin complement(186321..187484) Burkholderia phytofirmans PsJN 6279912 YP_001887901.1 CDS Bphyt_4148 NC_010676.1 188110 189792 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; OmpA/MotB domain protein; KEGG: rme:Rmet_1701 secretion protein HlyD; RND family efflux transporter MFP subunit 188110..189792 Burkholderia phytofirmans PsJN 6280200 YP_001887902.1 CDS Bphyt_4149 NC_010676.1 189796 192963 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_1702 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 189796..192963 Burkholderia phytofirmans PsJN 6279822 YP_001887903.1 CDS Bphyt_4150 NC_010676.1 192960 194378 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_1703 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 192960..194378 Burkholderia phytofirmans PsJN 6279959 YP_001887904.1 CDS Bphyt_4151 NC_010676.1 194405 194839 R KEGG: bxe:Bxe_B0566 hypothetical protein; hypothetical protein complement(194405..194839) Burkholderia phytofirmans PsJN 6280223 YP_001887905.1 CDS Bphyt_4152 NC_010676.1 194862 195305 R KEGG: bxe:Bxe_B0567 hypothetical protein; hypothetical protein complement(194862..195305) Burkholderia phytofirmans PsJN 6278483 YP_001887906.1 CDS Bphyt_4153 NC_010676.1 195477 196301 R KEGG: bxe:Bxe_B0568 hypothetical protein; hypothetical protein complement(195477..196301) Burkholderia phytofirmans PsJN 6280489 YP_001887907.1 CDS Bphyt_4154 NC_010676.1 196631 197530 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0570 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(196631..197530) Burkholderia phytofirmans PsJN 6278760 YP_001887908.1 CDS Bphyt_4155 NC_010676.1 197662 198579 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bxe:Bxe_B0571 putative carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 197662..198579 Burkholderia phytofirmans PsJN 6277929 YP_001887909.1 CDS Bphyt_4156 NC_010676.1 198610 199482 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0572 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(198610..199482) Burkholderia phytofirmans PsJN 6280546 YP_001887910.1 CDS Bphyt_4157 NC_010676.1 199674 200639 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B0573 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator 199674..200639 Burkholderia phytofirmans PsJN 6278497 YP_001887911.1 CDS Bphyt_4158 NC_010676.1 200712 202325 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0574 ABC sugar transporter, fused ATPase subunits; ABC transporter-like protein 200712..202325 Burkholderia phytofirmans PsJN 6278239 YP_001887912.1 CDS Bphyt_4159 NC_010676.1 202328 203329 D PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B0575 ABC sugar transporter, inner membrane subunit; monosaccharide-transporting ATPase 202328..203329 Burkholderia phytofirmans PsJN 6278970 YP_001887913.1 CDS Bphyt_4160 NC_010676.1 203468 204400 D TIGRFAM: ribokinase; PFAM: PfkB domain protein; Phosphomethylpyrimidine kinase type-1; KEGG: bxe:Bxe_B0576 putative ribokinase; ribokinase 203468..204400 Burkholderia phytofirmans PsJN 6277310 YP_001887914.1 CDS Bphyt_4161 NC_010676.1 204550 205626 D PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: sus:Acid_1342 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 204550..205626 Burkholderia phytofirmans PsJN 6277395 YP_001887915.1 CDS Bphyt_4162 NC_010676.1 206098 207810 D KEGG: bxe:Bxe_B0577 putative CHASE2 sensor protein; CHASE2 sensor protein 206098..207810 Burkholderia phytofirmans PsJN 6278238 YP_001887916.1 CDS Bphyt_4163 NC_010676.1 207813 208193 D KEGG: bxe:Bxe_B0578 hypothetical protein; hypothetical protein 207813..208193 Burkholderia phytofirmans PsJN 6278439 YP_001887917.1 CDS Bphyt_4164 NC_010676.1 208268 209902 D PFAM: peptidase M48 Ste24p; KEGG: bxe:Bxe_B0579 putative Zn dependent protease; peptidase M48 Ste24p 208268..209902 Burkholderia phytofirmans PsJN 6277389 YP_001887918.1 CDS Bphyt_4165 NC_010676.1 210328 210588 D hypothetical protein 210328..210588 Burkholderia phytofirmans PsJN 6277436 YP_001887919.1 CDS Bphyt_4166 NC_010676.1 210607 211944 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_3675 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(210607..211944) Burkholderia phytofirmans PsJN 6277540 YP_001887920.1 CDS Bphyt_4167 NC_010676.1 212053 212787 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B0580 putative transcriptional regulator, TetR family; TetR family transcriptional regulator complement(212053..212787) Burkholderia phytofirmans PsJN 6277491 YP_001887921.1 CDS Bphyt_4168 NC_010676.1 212852 213016 R hypothetical protein complement(212852..213016) Burkholderia phytofirmans PsJN 6277421 YP_001887922.1 CDS Bphyt_4169 NC_010676.1 213252 213458 D hypothetical protein 213252..213458 Burkholderia phytofirmans PsJN 6278237 YP_001887923.1 CDS Bphyt_4170 NC_010676.1 213778 215289 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C1350 ABC sugar transporter, fused ATPase subunits; ABC transporter-like protein 213778..215289 Burkholderia phytofirmans PsJN 6277307 YP_001887924.1 CDS Bphyt_4171 NC_010676.1 215307 216332 D PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C1349 ABC sugar transporter, inner membrane subunit; monosaccharide-transporting ATPase 215307..216332 Burkholderia phytofirmans PsJN 6278210 YP_001887925.1 CDS Bphyt_4172 NC_010676.1 216418 217356 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_C1348 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator 216418..217356 Burkholderia phytofirmans PsJN 6277529 YP_001887926.1 CDS Bphyt_4173 NC_010676.1 217467 218765 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bxe:Bxe_C1347 putative mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 217467..218765 Burkholderia phytofirmans PsJN 6277369 YP_001887927.1 CDS Bphyt_4175 NC_010676.1 219017 219985 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: oan:Oant_0791 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(219017..219985) Burkholderia phytofirmans PsJN 6277368 YP_001887928.1 CDS Bphyt_4176 NC_010676.1 220027 221211 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ecm:EcSMS35_4680 AP endonuclease, family 2; xylose isomerase domain-containing protein complement(220027..221211) Burkholderia phytofirmans PsJN 6277314 YP_001887929.1 CDS Bphyt_4177 NC_010676.1 221214 222383 R PFAM: protein of unknown function DUF993; KEGG: sme:SMc04402 hypothetical protein; hypothetical protein complement(221214..222383) Burkholderia phytofirmans PsJN 6278187 YP_001887930.1 CDS Bphyt_4178 NC_010676.1 222391 223170 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(222391..223170) Burkholderia phytofirmans PsJN 6277469 YP_001887931.1 CDS Bphyt_4179 NC_010676.1 223167 224312 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: vei:Veis_0882 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein complement(223167..224312) Burkholderia phytofirmans PsJN 6277476 YP_001887932.1 CDS Bphyt_4180 NC_010676.1 224526 226088 D PFAM: coenzyme A transferase; KEGG: vei:Veis_0883 coenzyme A transferase; coenzyme A transferase 224526..226088 Burkholderia phytofirmans PsJN 6277530 YP_001887933.1 CDS Bphyt_4181 NC_010676.1 226144 226827 R PFAM: regulatory protein TetR; KEGG: rde:RD1_0515 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(226144..226827) Burkholderia phytofirmans PsJN 6278070 YP_001887934.1 CDS Bphyt_4182 NC_010676.1 227041 228549 D PFAM: Aldehyde Dehydrogenase_; KEGG: sme:SMa1415 probable aldehyde; aldehyde dehydrogenase 227041..228549 Burkholderia phytofirmans PsJN 6277609 YP_001887935.1 CDS Bphyt_4183 NC_010676.1 228645 230318 D PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: vei:Veis_0884 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 228645..230318 Burkholderia phytofirmans PsJN 6277586 YP_001887936.1 CDS Bphyt_4184 NC_010676.1 230445 231524 D KEGG: vei:Veis_0885 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 230445..231524 Burkholderia phytofirmans PsJN 6277752 YP_001887937.1 CDS Bphyt_4185 NC_010676.1 231521 232549 D PFAM: inner-membrane translocator; KEGG: vei:Veis_0886 inner-membrane translocator; monosaccharide-transporting ATPase 231521..232549 Burkholderia phytofirmans PsJN 6277622 YP_001887938.1 CDS Bphyt_4186 NC_010676.1 232568 234067 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0887 ABC transporter related; ABC transporter-like protein 232568..234067 Burkholderia phytofirmans PsJN 6277677 YP_001887939.1 CDS Bphyt_4187 NC_010676.1 234075 235034 D PFAM: transport system permease protein; inner-membrane translocator; KEGG: vei:Veis_0888 inner-membrane translocator; monosaccharide-transporting ATPase 234075..235034 Burkholderia phytofirmans PsJN 6278719 YP_001887940.1 CDS Bphyt_4188 NC_010676.1 235088 235837 D PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0998 electron transfer flavoprotein, beta-subunit; electron transfer flavoprotein subunits alpha/beta 235088..235837 Burkholderia phytofirmans PsJN 6278769 YP_001887941.1 CDS Bphyt_4189 NC_010676.1 235852 236784 D PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bxe:Bxe_A0999 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 235852..236784 Burkholderia phytofirmans PsJN 6278842 YP_001887942.1 CDS Bphyt_4190 NC_010676.1 236940 237956 D PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A2190 putative aldo/keto oxidoreductase; pyridoxal 4-dehydrogenase 236940..237956 Burkholderia phytofirmans PsJN 6279056 YP_001887943.1 CDS Bphyt_4191 NC_010676.1 238054 239127 R PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: bur:Bcep18194_B0182 beta-lactamase-like; beta-lactamase domain-containing protein complement(238054..239127) Burkholderia phytofirmans PsJN 6279037 YP_001887944.1 CDS Bphyt_4192 NC_010676.1 239273 239929 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_B0181 peroxidase; peroxidase complement(239273..239929) Burkholderia phytofirmans PsJN 6279221 YP_001887945.1 CDS Bphyt_4193 NC_010676.1 240281 241123 R KEGG: bxe:Bxe_A3474 putative 10 TMS drug/metabolite exporter, DME family, DMT superfamily; 10 TMS drug/metabolite exporter complement(240281..241123) Burkholderia phytofirmans PsJN 6279179 YP_001887946.1 CDS Bphyt_4194 NC_010676.1 241250 242158 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3473 transcriptional regulator, LysR family; LysR family transcriptional regulator 241250..242158 Burkholderia phytofirmans PsJN 6279170 YP_001887947.1 CDS Bphyt_4195 NC_010676.1 242363 242686 D KEGG: bur:Bcep18194_B3177 hypothetical protein; hypothetical protein 242363..242686 Burkholderia phytofirmans PsJN 6279153 YP_001887948.1 CDS Bphyt_4196 NC_010676.1 242720 243685 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sen:SACE_1944 D-isomer specific 2-hydroxyacid dehydrogenase family protein; D-isomer specific 2-hydroxyacid dehydrogenase complement(242720..243685) Burkholderia phytofirmans PsJN 6279111 YP_001887949.1 CDS Bphyt_4197 NC_010676.1 243740 244396 R hypothetical protein complement(243740..244396) Burkholderia phytofirmans PsJN 6279331 YP_001887950.1 CDS Bphyt_4198 NC_010676.1 244374 244943 R PFAM: isochorismatase hydrolase; KEGG: reh:H16_B0623 amidase related to nicotinamidase; isochorismatase hydrolase complement(244374..244943) Burkholderia phytofirmans PsJN 6279323 YP_001887951.1 CDS Bphyt_4199 NC_010676.1 245467 245748 D KEGG: bxe:Bxe_A2488 hypothetical protein; hypothetical protein 245467..245748 Burkholderia phytofirmans PsJN 6279318 YP_001887952.1 CDS Bphyt_4200 NC_010676.1 245946 246491 D KEGG: reu:Reut_B4332 hypothetical protein; hypothetical protein 245946..246491 Burkholderia phytofirmans PsJN 6279303 YP_001887953.1 CDS Bphyt_4201 NC_010676.1 246679 247119 D PFAM: nuclear protein SET; KEGG: bxe:Bxe_C1219 hypothetical protein; nuclear protein SET 246679..247119 Burkholderia phytofirmans PsJN 6279299 YP_001887954.1 CDS Bphyt_4202 NC_010676.1 247214 247465 R PFAM: Transglycosylase-associated protein; KEGG: reh:H16_B2506 hypothetical membrane spanning protein; transglycosylase-associated protein complement(247214..247465) Burkholderia phytofirmans PsJN 6279297 YP_001887955.1 CDS Bphyt_4203 NC_010676.1 247652 249604 D KEGG: mms:mma_1194 ABC-type multidrug transport system, ATPase and permease components; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter ATPase/inner membrane subunits 247652..249604 Burkholderia phytofirmans PsJN 6279308 YP_001887956.1 CDS Bphyt_4205 NC_010676.1 249924 251138 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: sme:SMc00164 hypothetical protein; Phytanoyl-CoA dioxygenase 249924..251138 Burkholderia phytofirmans PsJN 6279414 YP_001887957.1 CDS Bphyt_4206 NC_010676.1 251525 252061 R KEGG: bam:Bamb_4781 hypothetical protein; hypothetical protein complement(251525..252061) Burkholderia phytofirmans PsJN 6279552 YP_001887958.1 CDS Bphyt_4207 NC_010676.1 252165 254402 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_C1225 putative xanthene dehydrogenase; acylaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein complement(252165..254402) Burkholderia phytofirmans PsJN 6279418 YP_001887959.1 CDS Bphyt_4208 NC_010676.1 254427 255434 R PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bxe:Bxe_C1224 putative oxidoreductase, molybopterin binding subunit; FAD-binding molybdopterin dehydrogenase complement(254427..255434) Burkholderia phytofirmans PsJN 6279609 YP_001887960.1 CDS Bphyt_4209 NC_010676.1 255446 255994 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_C1223 putative oxidoreductase; (2Fe-2S)-binding domain-containing protein complement(255446..255994) Burkholderia phytofirmans PsJN 6279582 YP_001887961.1 CDS Bphyt_4210 NC_010676.1 256392 257069 R PFAM: ThiJ/PfpI domain protein; KEGG: sme:SMb20212 hypothetical protein; ThiJ/PfpI domain-containing protein complement(256392..257069) Burkholderia phytofirmans PsJN 6279518 YP_001887962.1 CDS Bphyt_4211 NC_010676.1 257654 257941 D PFAM: protein of unknown function DUF1330; KEGG: bur:Bcep18194_C7348 protein of unknown function DUF1330; hypothetical protein 257654..257941 Burkholderia phytofirmans PsJN 6279442 YP_001887963.1 CDS Bphyt_4212 NC_010676.1 257979 258413 R PFAM: DGPFAETKE family protein; KEGG: bam:Bamb_4525 DGPFAETKE family protein; DGPFAETKE family protein complement(257979..258413) Burkholderia phytofirmans PsJN 6279598 YP_001887964.1 CDS Bphyt_4213 NC_010676.1 258560 259804 R PFAM: Citrate synthase; KEGG: bch:Bcen2424_3209 citrate synthase; citrate synthase complement(258560..259804) Burkholderia phytofirmans PsJN 6279766 YP_001887965.1 CDS Bphyt_4214 NC_010676.1 259900 260289 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bam:Bamb_6375 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(259900..260289) Burkholderia phytofirmans PsJN 6279849 YP_001887966.1 CDS Bphyt_4215 NC_010676.1 260315 261631 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_6376 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(260315..261631) Burkholderia phytofirmans PsJN 6279974 YP_001887967.1 CDS Bphyt_4216 NC_010676.1 261686 262444 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4042 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(261686..262444) Burkholderia phytofirmans PsJN 6280088 YP_001887968.1 CDS Bphyt_4217 NC_010676.1 262759 263721 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bam:Bamb_6378 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 262759..263721 Burkholderia phytofirmans PsJN 6280108 YP_001887969.1 CDS Bphyt_4218 NC_010676.1 263954 264427 R PFAM: PRC-barrel domain protein; KEGG: bxe:Bxe_B2570 hypothetical protein; PRC-barrel domain-containing protein complement(263954..264427) Burkholderia phytofirmans PsJN 6280251 YP_001887970.1 CDS Bphyt_4219 NC_010676.1 264498 264728 R KEGG: bte:BTH_II0963 hypothetical protein; hypothetical protein complement(264498..264728) Burkholderia phytofirmans PsJN 6280392 YP_001887971.1 CDS Bphyt_4220 NC_010676.1 264867 265595 R TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bam:Bamb_3446 haloacid dehalogenase, type II; type II haloacid dehalogenase complement(264867..265595) Burkholderia phytofirmans PsJN 6280448 YP_001887972.1 CDS Bphyt_4221 NC_010676.1 265743 266261 D KEGG: bxe:Bxe_A0242 hypothetical protein; hypothetical protein 265743..266261 Burkholderia phytofirmans PsJN 6280340 YP_001887973.1 CDS Bphyt_4222 NC_010676.1 266288 266614 R KEGG: bxe:Bxe_B1018 hypothetical protein; hypothetical protein complement(266288..266614) Burkholderia phytofirmans PsJN 6278126 YP_001887974.1 CDS Bphyt_4223 NC_010676.1 267165 267416 D hypothetical protein 267165..267416 Burkholderia phytofirmans PsJN 6278569 YP_001887975.1 CDS Bphyt_4224 NC_010676.1 267662 268183 R KEGG: bxe:Bxe_A1905 hypothetical protein; hypothetical protein complement(267662..268183) Burkholderia phytofirmans PsJN 6280555 YP_001887976.1 CDS Bphyt_4225 NC_010676.1 268356 268850 R TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bte:BTH_I1867 phasin family protein; phasin family protein complement(268356..268850) Burkholderia phytofirmans PsJN 6278583 YP_001887977.1 CDS Bphyt_4226 NC_010676.1 269225 269713 D PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2221 NUDIX hydrolase; NUDIX hydrolase 269225..269713 Burkholderia phytofirmans PsJN 6280470 YP_001887978.1 CDS Bphyt_4227 NC_010676.1 269803 270717 R PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bxe:Bxe_A1829 putative ornithine cyclodeaminase; ornithine cyclodeaminase/mu-crystallin complement(269803..270717) Burkholderia phytofirmans PsJN 6278391 YP_001887979.1 CDS Bphyt_4228 NC_010676.1 270764 271756 R KEGG: bxe:Bxe_B2492 putative asparaginase/glutaminase; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; type II L-asparaginase complement(270764..271756) Burkholderia phytofirmans PsJN 6279007 YP_001887980.1 CDS Bphyt_4229 NC_010676.1 271815 273062 R PFAM: FAD dependent oxidoreductase; KEGG: reu:Reut_A2589 D-amino acid dehydrogenase small subunit; D-amino-acid dehydrogenase complement(271815..273062) Burkholderia phytofirmans PsJN 6278741 YP_001887981.1 CDS Bphyt_4230 NC_010676.1 273265 274356 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: pol:Bpro_1392 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(273265..274356) Burkholderia phytofirmans PsJN 6279197 YP_001887982.1 CDS Bphyt_4231 NC_010676.1 274599 275753 D PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A4327 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor 274599..275753 Burkholderia phytofirmans PsJN 6279375 YP_001887983.1 CDS Bphyt_4232 NC_010676.1 276083 276619 D PFAM: Hemerythrin HHE cation binding domain protein; KEGG: bxe:Bxe_B2480 hypothetical protein; hemerythrin HHE cation binding domain-containing protein 276083..276619 Burkholderia phytofirmans PsJN 6277632 YP_001887984.1 CDS Bphyt_4233 NC_010676.1 277858 279399 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psb:Psyr_1002 ABC transporter; ABC transporter-like protein 277858..279399 Burkholderia phytofirmans PsJN 6277495 YP_001887985.1 CDS Bphyt_4234 NC_010676.1 279424 280617 D PFAM: inner-membrane translocator; KEGG: psp:PSPPH_1052 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 279424..280617 Burkholderia phytofirmans PsJN 6278369 YP_001887986.1 CDS Bphyt_4235 NC_010676.1 280614 281540 D PFAM: inner-membrane translocator; KEGG: psb:Psyr_1004 inner-membrane translocator; inner-membrane translocator 280614..281540 Burkholderia phytofirmans PsJN 6278789 YP_001887987.1 CDS Bphyt_4236 NC_010676.1 281719 282801 D PFAM: basic membrane lipoprotein; KEGG: psa:PST_3583 bmp family protein; basic membrane lipoprotein 281719..282801 Burkholderia phytofirmans PsJN 6277746 YP_001887988.1 CDS Bphyt_4238 NC_010676.1 283325 283900 D catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 283325..283900 Burkholderia phytofirmans PsJN 6280087 YP_001887989.1 CDS Bphyt_4239 NC_010676.1 283903 284733 D KEGG: har:HEAR2036 S-formylglutathione hydrolase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 283903..284733 Burkholderia phytofirmans PsJN 6277733 YP_001887990.1 CDS Bphyt_4240 NC_010676.1 284936 286489 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bpt:Bpet4036 transcriptional regulator, GntR-family; GntR family transcriptional regulator complement(284936..286489) Burkholderia phytofirmans PsJN 6280067 YP_001887991.1 CDS Bphyt_4242 NC_010676.1 287713 288102 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psa:PST_3582 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 287713..288102 Burkholderia phytofirmans PsJN 6279289 YP_001887992.1 CDS Bphyt_4243 NC_010676.1 288118 289092 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mms:mma_2506 oxidoreductase/oxygenase, VanB family; ferredoxin 288118..289092 Burkholderia phytofirmans PsJN 6279212 YP_001887993.1 CDS Bphyt_4244 NC_010676.1 289194 290252 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mms:mma_2504 hypothetical protein; Rieske (2Fe-2S) domain-containing protein 289194..290252 Burkholderia phytofirmans PsJN 6277378 YP_001887994.1 CDS Bphyt_4245 NC_010676.1 290385 291500 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: mms:mma_2504 hypothetical protein; Rieske (2Fe-2S) domain-containing protein 290385..291500 Burkholderia phytofirmans PsJN 6279981 YP_001887995.1 CDS Bphyt_4246 NC_010676.1 291497 291706 D KEGG: fre:Franean1_1634 hypothetical protein; hypothetical protein 291497..291706 Burkholderia phytofirmans PsJN 6280550 YP_001887996.1 CDS Bphyt_4247 NC_010676.1 291726 292955 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro02653 probable FAD-dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 291726..292955 Burkholderia phytofirmans PsJN 6278744 YP_001887997.1 CDS Bphyt_4248 NC_010676.1 293291 294607 D PFAM: aminotransferase class-III; KEGG: tel:tlr0408 omega-amino acid:pyruvate aminotransferase; class III aminotransferase 293291..294607 Burkholderia phytofirmans PsJN 6278530 YP_001887998.1 CDS Bphyt_4249 NC_010676.1 294653 296158 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bbr:BB0868 putative methylmalonate-semialdehyde dehydrogenase [acylating]; methylmalonate-semialdehyde dehydrogenase 294653..296158 Burkholderia phytofirmans PsJN 6279174 YP_001887999.1 CDS Bphyt_4250 NC_010676.1 296186 297607 D catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 296186..297607 Burkholderia phytofirmans PsJN 6278587 YP_001888000.1 CDS cofG NC_010676.1 297675 298835 D 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis along with cofH; FO synthase subunit 1 297675..298835 Burkholderia phytofirmans PsJN 6280534 YP_001888001.1 CDS Bphyt_4252 NC_010676.1 298832 300139 D PFAM: Radical SAM domain protein; KEGG: pde:Pden_1115 radical SAM domain protein; radical SAM protein 298832..300139 Burkholderia phytofirmans PsJN 6279214 YP_001888002.1 CDS Bphyt_4253 NC_010676.1 300132 301136 D catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); 2-phospho-L-lactate transferase 300132..301136 Burkholderia phytofirmans PsJN 6279528 YP_001888003.1 CDS Bphyt_4254 NC_010676.1 301133 301774 D PFAM: protein of unknown function DUF121; KEGG: cps:CPS_4046 hypothetical protein; hypothetical protein 301133..301774 Burkholderia phytofirmans PsJN 6278908 YP_001888004.1 CDS Bphyt_4255 NC_010676.1 301771 302550 D TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: cps:CPS_4045 putative F420-dependent oxidoreductase; F420-dependent oxidoreductase 301771..302550 Burkholderia phytofirmans PsJN 6279321 YP_001888005.1 CDS Bphyt_4256 NC_010676.1 302547 303227 D TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: pde:Pden_1119 NADPH-dependent F420 reductase; NADPH-dependent F420 reductase 302547..303227 Burkholderia phytofirmans PsJN 6278986 YP_001888006.1 CDS Bphyt_4257 NC_010676.1 303260 304261 D PFAM: Luciferase-like monooxygenase; KEGG: pde:Pden_1120 luciferase family protein; luciferase-like monooxygenase 303260..304261 Burkholderia phytofirmans PsJN 6277350 YP_001888007.1 CDS Bphyt_4258 NC_010676.1 304405 305643 D KEGG: aav:Aave_0970 amidase, hydantoinase/carbamoylase family; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; hydantoinase/carbamoylase family amidase 304405..305643 Burkholderia phytofirmans PsJN 6277767 YP_001888008.1 CDS Bphyt_4259 NC_010676.1 305711 306829 D PFAM: alanine dehydrogenase/PNT domain protein; KEGG: reh:H16_A0850 NAD(P) transhydrogenase subunit alpha 1; NAD(P)(+) transhydrogenase 305711..306829 Burkholderia phytofirmans PsJN 6277367 YP_001888009.1 CDS Bphyt_4260 NC_010676.1 306840 307196 D KEGG: reh:H16_A0851 NAD(P) transhydrogenase subunit alpha 2; NAD(P) transhydrogenase subunit alpha 2 306840..307196 Burkholderia phytofirmans PsJN 6277760 YP_001888010.1 CDS Bphyt_4261 NC_010676.1 307193 308656 D PFAM: NAD(P) transhydrogenase beta subunit; KEGG: reh:H16_A3131 NAD(P) transhydrogenase subunit beta; NAD(P)(+) transhydrogenase 307193..308656 Burkholderia phytofirmans PsJN 6278410 YP_001888011.1 CDS Bphyt_4263 NC_010676.1 309881 310831 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_1670 transcriptional regulator, LysR family; LysR family transcriptional regulator 309881..310831 Burkholderia phytofirmans PsJN 6280515 YP_001888012.1 CDS Bphyt_4264 NC_010676.1 310978 311538 D PFAM: transposase IS4 family protein; KEGG: bvi:Bcep1808_7045 transposase, IS4 family protein; transposase IS4 family protein 310978..311538 Burkholderia phytofirmans PsJN 6277425 YP_001888013.1 CDS Bphyt_4265 NC_010676.1 312409 313455 D PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_A5230 outer membrane protein, (porin); porin 312409..313455 Burkholderia phytofirmans PsJN 6279043 YP_001888014.1 CDS Bphyt_4267 NC_010676.1 315315 317000 R PFAM: phosphoesterase; KEGG: bmn:BMA10247_A1822 phosphoesterase family protein; phosphoesterase complement(315315..317000) Burkholderia phytofirmans PsJN 6278627 YP_001888015.1 CDS Bphyt_4268 NC_010676.1 317481 318581 D KEGG: xac:XAC3089 hypothetical protein; hypothetical protein 317481..318581 Burkholderia phytofirmans PsJN 6279827 YP_001888016.1 CDS Bphyt_4269 NC_010676.1 318663 319337 D KEGG: mag:amb1293 ABC-type uncharacterized transport system; ABC transporter substrate-binding protein-like protein 318663..319337 Burkholderia phytofirmans PsJN 6279860 YP_001888017.1 CDS Bphyt_4270 NC_010676.1 319331 320455 D PFAM: high-affinity nickel-transporter; KEGG: mag:amb1292 ABC-type uncharacterized transport system; high-affinity nickel-transporter 319331..320455 Burkholderia phytofirmans PsJN 6279599 YP_001888018.1 CDS Bphyt_4271 NC_010676.1 320572 321891 R PFAM: protein of unknown function DUF323; KEGG: bxe:Bxe_B0605 hypothetical protein; hypothetical protein complement(320572..321891) Burkholderia phytofirmans PsJN 6280506 YP_001888019.1 CDS Bphyt_4272 NC_010676.1 322022 322678 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bxe:Bxe_B0606 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator complement(322022..322678) Burkholderia phytofirmans PsJN 6280040 YP_001888020.1 CDS Bphyt_4273 NC_010676.1 323082 323549 R PFAM: UspA domain protein; KEGG: bxe:Bxe_B0607 putative universal stress-related protein; UspA domain-containing protein complement(323082..323549) Burkholderia phytofirmans PsJN 6278510 YP_001888021.1 CDS Bphyt_4274 NC_010676.1 323839 324528 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: atu:Atu4191 transcriptional regulator, GntR family; GntR family transcriptional regulator 323839..324528 Burkholderia phytofirmans PsJN 6277743 YP_001888022.1 CDS Bphyt_4275 NC_010676.1 324705 325298 R PFAM: autoinducer synthesis protein; KEGG: bxe:Bxe_B0608 putative autoinducer synthesis protein; autoinducer synthesis protein complement(324705..325298) Burkholderia phytofirmans PsJN 6277881 YP_001888023.1 CDS Bphyt_4276 NC_010676.1 325453 325770 D KEGG: bxe:Bxe_B0609 hypothetical protein; hypothetical protein 325453..325770 Burkholderia phytofirmans PsJN 6278880 YP_001888024.1 CDS Bphyt_4277 NC_010676.1 325754 326458 R PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bxe:Bxe_B0610 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(325754..326458) Burkholderia phytofirmans PsJN 6279560 YP_001888025.1 CDS Bphyt_4278 NC_010676.1 327147 328088 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_B0611 gluconolactonase; gluconolactonase 327147..328088 Burkholderia phytofirmans PsJN 6277331 YP_001888026.1 CDS Bphyt_4279 NC_010676.1 328328 329497 D PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_1684 extracellular solute-binding protein, family 1; family 1 extracellular solute-binding protein 328328..329497 Burkholderia phytofirmans PsJN 6278406 YP_001888027.1 CDS Bphyt_4280 NC_010676.1 329586 330665 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bur:Bcep18194_A4846 ABC transporter, ATPase subunit; ABC transporter-like protein 329586..330665 Burkholderia phytofirmans PsJN 6278521 YP_001888028.1 CDS Bphyt_4281 NC_010676.1 330662 331540 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_1592 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 330662..331540 Burkholderia phytofirmans PsJN 6279608 YP_001888029.1 CDS Bphyt_4282 NC_010676.1 331540 332478 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcm:Bcenmc03_1659 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 331540..332478 Burkholderia phytofirmans PsJN 6277353 YP_001888030.1 CDS Bphyt_4283 NC_010676.1 332491 334296 D catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 332491..334296 Burkholderia phytofirmans PsJN 6277795 YP_001888031.1 CDS Bphyt_4284 NC_010676.1 334402 335007 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B0613 short chain dehydrogenase; short chain dehydrogenase complement(334402..335007) Burkholderia phytofirmans PsJN 6278940 YP_001888032.1 CDS Bphyt_4285 NC_010676.1 335224 335679 R KEGG: bxe:Bxe_B0614 hypothetical protein; hypothetical protein complement(335224..335679) Burkholderia phytofirmans PsJN 6277587 YP_001888033.1 CDS Bphyt_4286 NC_010676.1 336000 336233 D KEGG: bxe:Bxe_B0615 hypothetical protein; hypothetical protein 336000..336233 Burkholderia phytofirmans PsJN 6277423 YP_001888034.1 CDS Bphyt_4287 NC_010676.1 336360 337286 D KEGG: bxe:Bxe_B0616 serine O-acetyltransferase; Serine O-acetyltransferase 336360..337286 Burkholderia phytofirmans PsJN 6278433 YP_001888035.1 CDS Bphyt_4288 NC_010676.1 337430 338251 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bxe:Bxe_B0617 transcriptional regulator, AraC family; AraC family transcriptional regulator 337430..338251 Burkholderia phytofirmans PsJN 6278729 YP_001888036.1 CDS Bphyt_4289 NC_010676.1 338297 338812 R PFAM: membrane-bound metal-dependent hydrolase; KEGG: bxe:Bxe_B0618 hypothetical protein; membrane-bound metal-dependent hydrolase complement(338297..338812) Burkholderia phytofirmans PsJN 6278712 YP_001888037.1 CDS Bphyt_4290 NC_010676.1 338952 339422 R KEGG: bxe:Bxe_B0619 hypothetical protein; hypothetical protein complement(338952..339422) Burkholderia phytofirmans PsJN 6279320 YP_001888038.1 CDS Bphyt_4291 NC_010676.1 339621 340772 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B0620 outer membrane porin, OmpC family; porin complement(339621..340772) Burkholderia phytofirmans PsJN 6278937 YP_001888039.1 CDS Bphyt_4292 NC_010676.1 341401 341937 D KEGG: bxe:Bxe_B0621 hypothetical protein; hypothetical protein 341401..341937 Burkholderia phytofirmans PsJN 6279208 YP_001888040.1 CDS Bphyt_4293 NC_010676.1 342154 344106 D KEGG: bxe:Bxe_B0622 putative exported alkaline phosphatase; exported alkaline phosphatase 342154..344106 Burkholderia phytofirmans PsJN 6279350 YP_001888041.1 CDS Bphyt_4294 NC_010676.1 344204 344794 D KEGG: xac:XACb0003 hypothetical protein; hypothetical protein 344204..344794 Burkholderia phytofirmans PsJN 6279306 YP_001888042.1 CDS Bphyt_4295 NC_010676.1 345059 345493 R KEGG: bvi:Bcep1808_5556 hypothetical protein; hypothetical protein complement(345059..345493) Burkholderia phytofirmans PsJN 6280476 YP_001888043.1 CDS Bphyt_4296 NC_010676.1 345740 346441 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bxe:Bxe_B0624 hypothetical protein; CDP-alcohol phosphatidyltransferase 345740..346441 Burkholderia phytofirmans PsJN 6277639 YP_001888044.1 CDS Bphyt_4297 NC_010676.1 346438 347250 D PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B0625 oxidoreductase, 2OG-Fe(II) oxygenase family; 2OG-Fe(II) oxygenase 346438..347250 Burkholderia phytofirmans PsJN 6278794 YP_001888045.1 CDS Bphyt_4298 NC_010676.1 347247 348266 D KEGG: bxe:Bxe_B0626 hypothetical protein; hypothetical protein 347247..348266 Burkholderia phytofirmans PsJN 6280560 YP_001888046.1 CDS Bphyt_4299 NC_010676.1 348294 349058 D KEGG: bxe:Bxe_B0627 hypothetical protein; hypothetical protein 348294..349058 Burkholderia phytofirmans PsJN 6279417 YP_001888047.1 CDS Bphyt_4300 NC_010676.1 349284 350687 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0628 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein 349284..350687 Burkholderia phytofirmans PsJN 6280499 YP_001888048.1 CDS Bphyt_4301 NC_010676.1 350909 352642 D KEGG: bxe:Bxe_B0629 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 350909..352642 Burkholderia phytofirmans PsJN 6280516 YP_001888049.1 CDS Bphyt_4302 NC_010676.1 352770 353813 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bxe:Bxe_B0630 putative serine protease; 2-alkenal reductase complement(352770..353813) Burkholderia phytofirmans PsJN 6278969 YP_001888050.1 CDS Bphyt_4303 NC_010676.1 354105 354503 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0631 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 354105..354503 Burkholderia phytofirmans PsJN 6280006 YP_001888051.1 CDS Bphyt_4304 NC_010676.1 354660 355586 D PFAM: protein of unknown function DUF344; KEGG: bxe:Bxe_B0632 hypothetical protein; hypothetical protein 354660..355586 Burkholderia phytofirmans PsJN 6279663 YP_001888052.1 CDS Bphyt_4305 NC_010676.1 355696 357282 R PFAM: phosphate transporter; KEGG: bur:Bcep18194_B0357 phosphate transporter; phosphate transporter complement(355696..357282) Burkholderia phytofirmans PsJN 6278287 YP_001888053.1 CDS Bphyt_4306 NC_010676.1 357489 358082 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_C6188 short chain dehydrogenase; short chain dehydrogenase complement(357489..358082) Burkholderia phytofirmans PsJN 6280098 YP_001888054.1 CDS Bphyt_4307 NC_010676.1 358349 359230 D PFAM: CHAD domain containing protein; KEGG: bxe:Bxe_B0637 hypothetical protein; CHAD domain-containing protein 358349..359230 Burkholderia phytofirmans PsJN 6279436 YP_001888055.1 CDS Bphyt_4308 NC_010676.1 359257 360294 R KEGG: bxe:Bxe_B0639 putative DedA-like transmembrane protein; DedA-like transmembrane protein complement(359257..360294) Burkholderia phytofirmans PsJN 6280442 YP_001888056.1 CDS Bphyt_4309 NC_010676.1 360587 361492 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_B0640 putative transmembrane protein; hypothetical protein 360587..361492 Burkholderia phytofirmans PsJN 6279979 YP_001888057.1 CDS Bphyt_4310 NC_010676.1 361526 362164 R PFAM: GTP cyclohydrolase I; KEGG: bxe:Bxe_B0641 GTP cyclohydrolase I; GTP cyclohydrolase I complement(361526..362164) Burkholderia phytofirmans PsJN 6280147 YP_001888058.1 CDS Bphyt_4311 NC_010676.1 362288 363217 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0642 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(362288..363217) Burkholderia phytofirmans PsJN 6280231 YP_001888059.1 CDS Bphyt_4312 NC_010676.1 363604 364311 D KEGG: bxe:Bxe_B0643 3-oxoadipate CoA-transferase subunit A (PcaI); TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 363604..364311 Burkholderia phytofirmans PsJN 6279610 YP_001888060.1 CDS Bphyt_4313 NC_010676.1 364325 364984 D KEGG: bxe:Bxe_B0644 3-oxoadipate CoA-transferase subunit B (PcaJ); TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 364325..364984 Burkholderia phytofirmans PsJN 6279400 YP_001888061.1 CDS Bphyt_4314 NC_010676.1 365077 366456 D Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase 365077..366456 Burkholderia phytofirmans PsJN 6277579 YP_001888062.1 CDS Bphyt_4315 NC_010676.1 366462 367253 D TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0646 3-oxoadipate enol-lactonase (PcaD); 3-oxoadipate enol-lactonase 366462..367253 Burkholderia phytofirmans PsJN 6277382 YP_001888063.1 CDS Bphyt_4316 NC_010676.1 367250 367645 D KEGG: bxe:Bxe_B0647 4-carboxymuconolactone decarboxylase (PcaC); TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase 367250..367645 Burkholderia phytofirmans PsJN 6279296 YP_001888064.1 CDS Bphyt_4317 NC_010676.1 368163 369011 D PFAM: ABC-2 type transporter; KEGG: bxe:Bxe_B0650 ABC polysaccharide efflux pump, inner membrane subunit; ABC transporter 368163..369011 Burkholderia phytofirmans PsJN 6279330 YP_001888065.1 CDS Bphyt_4318 NC_010676.1 369012 370382 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0651 ABC polysaccharide efflux pump, ATPase subunit; ABC transporter-like protein 369012..370382 Burkholderia phytofirmans PsJN 6279102 YP_001888066.1 CDS Bphyt_4319 NC_010676.1 370431 373142 D PFAM: glycosyl transferase group 1; KEGG: amt:Amet_3452 glycosyl transferase, group 1; group 1 glycosyl transferase 370431..373142 Burkholderia phytofirmans PsJN 6279241 YP_001888067.1 CDS Bphyt_4320 NC_010676.1 373209 374396 D PFAM: Methyltransferase type 11; KEGG: bxe:Bxe_B0652 putative glycosyl transferase; type 11 methyltransferase 373209..374396 Burkholderia phytofirmans PsJN 6278997 YP_001888068.1 CDS Bphyt_4321 NC_010676.1 374463 375566 D PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: bxe:Bxe_A3733 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 374463..375566 Burkholderia phytofirmans PsJN 6278872 YP_001888069.1 CDS Bphyt_4322 NC_010676.1 375588 376316 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B0653 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(375588..376316) Burkholderia phytofirmans PsJN 6279161 YP_001888070.1 CDS Bphyt_4323 NC_010676.1 376678 378306 D KEGG: bxe:Bxe_B0654 hypothetical protein; hypothetical protein 376678..378306 Burkholderia phytofirmans PsJN 6277831 YP_001888071.1 CDS Bphyt_4324 NC_010676.1 378359 379297 D PFAM: protein of unknown function DUF375; KEGG: bxe:Bxe_B0655 hypothetical protein; hypothetical protein 378359..379297 Burkholderia phytofirmans PsJN 6277317 YP_001888072.1 CDS Bphyt_4325 NC_010676.1 379273 379863 D PFAM: protein of unknown function DUF1185; KEGG: bxe:Bxe_B0656 hypothetical protein; hypothetical protein 379273..379863 Burkholderia phytofirmans PsJN 6278538 YP_001888073.1 CDS Bphyt_4326 NC_010676.1 379937 380521 D PFAM: protein of unknown function DUF1185; KEGG: bxe:Bxe_B0657 hypothetical protein; hypothetical protein 379937..380521 Burkholderia phytofirmans PsJN 6277407 YP_001888074.1 CDS Bphyt_4327 NC_010676.1 380697 382637 D PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B0658 ABC branched chain amino acid family transporter, fused inner membrane subunits; inner-membrane translocator 380697..382637 Burkholderia phytofirmans PsJN 6279300 YP_001888075.1 CDS Bphyt_4328 NC_010676.1 382634 383443 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0659 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter-like protein 382634..383443 Burkholderia phytofirmans PsJN 6279329 YP_001888076.1 CDS Bphyt_4329 NC_010676.1 383440 384153 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0660 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter-like protein 383440..384153 Burkholderia phytofirmans PsJN 6279066 YP_001888077.1 CDS Bphyt_4330 NC_010676.1 384232 385431 D PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bxe:Bxe_B0661 putative amidohydrolase; amidohydrolase 384232..385431 Burkholderia phytofirmans PsJN 6279188 YP_001888078.1 CDS Bphyt_4331 NC_010676.1 385463 385981 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_B0662 putative oxidoreductase alpha subunit; (2Fe-2S)-binding domain-containing protein 385463..385981 Burkholderia phytofirmans PsJN 6279171 YP_001888079.1 CDS Bphyt_4332 NC_010676.1 385978 389601 D PFAM: cytochrome c class I; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B0663 isoquinoline 1-oxidoreductase; Isoquinoline 1-oxidoreductase., gluconate 2-dehydrogenase 385978..389601 Burkholderia phytofirmans PsJN 6279186 YP_001888080.1 CDS Bphyt_4333 NC_010676.1 389675 390883 D PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_B0664 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor 389675..390883 Burkholderia phytofirmans PsJN 6279209 YP_001888081.1 CDS Bphyt_4334 NC_010676.1 391009 391260 R KEGG: bxe:Bxe_B0668 hypothetical protein; hypothetical protein complement(391009..391260) Burkholderia phytofirmans PsJN 6279220 YP_001888082.1 CDS Bphyt_4335 NC_010676.1 391439 391993 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_A1388 sigma-24 (FecI); ECF subfamily RNA polymerase sigma-24 subunit 391439..391993 Burkholderia phytofirmans PsJN 6278982 YP_001888083.1 CDS Bphyt_4336 NC_010676.1 392006 392314 D KEGG: bur:Bcep18194_C6639 hypothetical protein; hypothetical protein 392006..392314 Burkholderia phytofirmans PsJN 6278967 YP_001888084.1 CDS Bphyt_4337 NC_010676.1 392317 392613 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bur:Bcep18194_C6638 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 392317..392613 Burkholderia phytofirmans PsJN 6277305 YP_001888085.1 CDS Bphyt_4338 NC_010676.1 392706 393422 D PFAM: O-methyltransferase family 3; Methyltransferase type 11; KEGG: bur:Bcep18194_C6637 O-methyltransferase, family 3; O-methyltransferase family protein 392706..393422 Burkholderia phytofirmans PsJN 6277507 YP_001888086.1 CDS Bphyt_4339 NC_010676.1 393591 394109 D KEGG: bxe:Bxe_B0669 hypothetical protein; hypothetical protein 393591..394109 Burkholderia phytofirmans PsJN 6278211 YP_001888087.1 CDS Bphyt_4340 NC_010676.1 394320 395648 R catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase complement(394320..395648) Burkholderia phytofirmans PsJN 6278352 YP_001888088.1 CDS Bphyt_4341 NC_010676.1 395907 397322 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_B0671 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator 395907..397322 Burkholderia phytofirmans PsJN 6277386 YP_001888089.1 CDS Bphyt_4342 NC_010676.1 397332 397955 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B0672 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA complement(397332..397955) Burkholderia phytofirmans PsJN 6277401 YP_001888090.1 CDS Bphyt_4343 NC_010676.1 398332 399021 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bur:Bcep18194_B0419 ferredoxin/oxidoreductase FAD/NAD(P)-binding; oxidoreductase FAD/NAD(P)-binding domain-containing protein 398332..399021 Burkholderia phytofirmans PsJN 6277319 YP_001888091.1 CDS Bphyt_4344 NC_010676.1 399589 399789 D KEGG: bte:BTH_II0363 hypothetical protein; hypothetical protein 399589..399789 Burkholderia phytofirmans PsJN 6278235 YP_001888092.1 CDS Bphyt_4345 NC_010676.1 399976 400737 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_3959 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(399976..400737) Burkholderia phytofirmans PsJN 6278231 YP_001888093.1 CDS Bphyt_4346 NC_010676.1 400778 401656 R PFAM: NmrA family protein; KEGG: mlo:mlr1895 hypothetical protein; NmrA family protein complement(400778..401656) Burkholderia phytofirmans PsJN 6277345 YP_001888094.1 CDS Bphyt_4347 NC_010676.1 401818 402390 R PFAM: regulatory protein TetR; KEGG: cak:Caul_5130 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(401818..402390) Burkholderia phytofirmans PsJN 6278240 YP_001888095.1 CDS Bphyt_4348 NC_010676.1 402574 403284 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_4292 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(402574..403284) Burkholderia phytofirmans PsJN 6278333 YP_001888096.1 CDS Bphyt_4349 NC_010676.1 403391 404143 R PFAM: dihydrodipicolinate reductase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: reu:Reut_A1579 NAD-dependent epimerase/dehydratase:dTDP-4-dehydrorhamnose reductase:NmrA-like; NmrA family protein complement(403391..404143) Burkholderia phytofirmans PsJN 6278462 YP_001888097.1 CDS Bphyt_4350 NC_010676.1 404332 405861 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bam:Bamb_5788 transcriptional regulator, GntR family; GntR family transcriptional regulator 404332..405861 Burkholderia phytofirmans PsJN 6278305 YP_001888098.1 CDS Bphyt_4351 NC_010676.1 405979 406653 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mms:mma_1228 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(405979..406653) Burkholderia phytofirmans PsJN 6277633 YP_001888099.1 CDS Bphyt_4352 NC_010676.1 406650 407117 R PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_2190 PhnO-related protein; N-acetyltransferase GCN5 complement(406650..407117) Burkholderia phytofirmans PsJN 6278041 YP_001888100.1 CDS Bphyt_4353 NC_010676.1 407235 408149 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcm:Bcenmc03_6414 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(407235..408149) Burkholderia phytofirmans PsJN 6278044 YP_001888101.1 CDS Bphyt_4354 NC_010676.1 408334 409197 D PFAM: NmrA family protein; KEGG: bam:Bamb_6112 NmrA family protein; NmrA family protein 408334..409197 Burkholderia phytofirmans PsJN 6277593 YP_001888102.1 CDS Bphyt_4355 NC_010676.1 409401 409805 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_C7168 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 409401..409805 Burkholderia phytofirmans PsJN 6277357 YP_001888103.1 CDS Bphyt_4356 NC_010676.1 409847 410698 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0682 putative hydrolase, alpha/beta fold family; alpha/beta fold family hydrolase complement(409847..410698) Burkholderia phytofirmans PsJN 6277528 YP_001888104.1 CDS Bphyt_4357 NC_010676.1 410794 411645 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0683 transcriptional regulator, LysR family; LysR family transcriptional regulator 410794..411645 Burkholderia phytofirmans PsJN 6277448 YP_001888105.1 CDS Bphyt_4358 NC_010676.1 411677 412609 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: reh:H16_B0869 hypothetical protein; cobalamin synthesis protein P47K complement(411677..412609) Burkholderia phytofirmans PsJN 6278054 YP_001888106.1 CDS Bphyt_4359 NC_010676.1 412606 414264 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bmu:Bmul_6052 amidohydrolase 3; amidohydrolase 3 complement(412606..414264) Burkholderia phytofirmans PsJN 6278565 YP_001888107.1 CDS Bphyt_4360 NC_010676.1 414298 415683 R PFAM: Na+/solute symporter; KEGG: reh:H16_B0867 APC transporter, SSS family; Na+/solute symporter complement(414298..415683) Burkholderia phytofirmans PsJN 6278621 YP_001888108.1 CDS Bphyt_4361 NC_010676.1 415696 415905 R KEGG: reu:Reut_B5755 hypothetical protein; hypothetical protein complement(415696..415905) Burkholderia phytofirmans PsJN 6278604 YP_001888109.1 CDS Bphyt_4362 NC_010676.1 416189 416599 D PFAM: protein of unknown function DUF1486; KEGG: bxe:Bxe_B0684 putative taurine dehydrogenase, small subunit; hypothetical protein 416189..416599 Burkholderia phytofirmans PsJN 6278666 YP_001888110.1 CDS Bphyt_4363 NC_010676.1 416613 418028 D PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0685 putative taurine dehydrogenase, large subunit; FAD dependent oxidoreductase 416613..418028 Burkholderia phytofirmans PsJN 6278691 YP_001888111.1 CDS Bphyt_4364 NC_010676.1 418298 419728 D PFAM: amino acid permease-associated region; KEGG: bxe:Bxe_B0686 beta-alanine/gamma-aminobutyrate-H+ symporter, AAT family, APC superfamily; amino acid permease-associated protein 418298..419728 Burkholderia phytofirmans PsJN 6278715 YP_001888112.1 CDS Bphyt_4365 NC_010676.1 419869 420858 D PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bxe:Bxe_B0687 putative cobalt insertion protein; cobaltochelatase 419869..420858 Burkholderia phytofirmans PsJN 6278879 YP_001888113.1 CDS Bphyt_4366 NC_010676.1 420855 422591 D PFAM: Cobalt chelatase CobT subunit; KEGG: bxe:Bxe_B0688 putative cobalamin biosynthesis CobT protein; cobaltochelatase 420855..422591 Burkholderia phytofirmans PsJN 6278747 YP_001888114.1 CDS Bphyt_4367 NC_010676.1 422613 423374 R PFAM: protein of unknown function DUF81; KEGG: bxe:Bxe_B0689 hypothetical protein; hypothetical protein complement(422613..423374) Burkholderia phytofirmans PsJN 6278850 YP_001888115.1 CDS Bphyt_4368 NC_010676.1 423371 424405 R TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; KEGG: bxe:Bxe_B0690 phosphate acetyltransferase; phosphate acetyltransferase complement(423371..424405) Burkholderia phytofirmans PsJN 6278921 YP_001888116.1 CDS Bphyt_4369 NC_010676.1 424554 426386 R catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source; sulfoacetaldehyde acetyltransferase complement(424554..426386) Burkholderia phytofirmans PsJN 6279005 YP_001888117.1 CDS Bphyt_4370 NC_010676.1 426574 428031 R TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bur:Bcep18194_B1988 aldehyde dehydrogenase; phosphonoacetaldehyde dehydrogenase complement(426574..428031) Burkholderia phytofirmans PsJN 6279003 YP_001888118.1 CDS Bphyt_4371 NC_010676.1 428227 429147 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0692 ABC taurine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(428227..429147) Burkholderia phytofirmans PsJN 6279071 YP_001888119.1 CDS Bphyt_4372 NC_010676.1 429140 429955 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0693 ABC taurine transporter, ATPase subunit; ABC transporter-like protein complement(429140..429955) Burkholderia phytofirmans PsJN 6279228 YP_001888120.1 CDS Bphyt_4373 NC_010676.1 429989 431047 R KEGG: bxe:Bxe_B0694 ABC taurine transporter, periplasmic ligand binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; taurine ABC transporter periplasmic binding protein complement(429989..431047) Burkholderia phytofirmans PsJN 6279196 YP_001888121.1 CDS Bphyt_4374 NC_010676.1 431369 432895 D PFAM: regulatory protein GntR HTH; KEGG: bxe:Bxe_B0695 transcriptional regulator, GntR family; GntR family transcriptional regulator 431369..432895 Burkholderia phytofirmans PsJN 6279167 YP_001888122.1 CDS Bphyt_4375 NC_010676.1 432938 433690 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0696 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(432938..433690) Burkholderia phytofirmans PsJN 6279060 YP_001888123.1 CDS Bphyt_4376 NC_010676.1 433809 434645 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0697 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(433809..434645) Burkholderia phytofirmans PsJN 6280549 YP_001888124.1 CDS Bphyt_4377 NC_010676.1 434851 436506 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bxe:Bxe_B0698 putative glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 434851..436506 Burkholderia phytofirmans PsJN 6279406 YP_001888125.1 CDS Bphyt_4378 NC_010676.1 436696 438006 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0699 major facilitator superfamily (MFS)metabolite/H+ symporter; major facilitator superfamily protein 436696..438006 Burkholderia phytofirmans PsJN 6279737 YP_001888126.1 CDS Bphyt_4379 NC_010676.1 438126 438503 R PFAM: PilT protein domain protein; KEGG: reu:Reut_C6344 PilT protein, N-terminal; PilT protein domain-containing protein complement(438126..438503) Burkholderia phytofirmans PsJN 6280404 YP_001888127.1 CDS Bphyt_4380 NC_010676.1 438503 438733 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: reu:Reut_C6345 prevent-host-death protein; prevent-host-death family protein complement(438503..438733) Burkholderia phytofirmans PsJN 6280027 YP_001888128.1 CDS Bphyt_4381 NC_010676.1 438866 439630 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0700 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(438866..439630) Burkholderia phytofirmans PsJN 6279434 YP_001888129.1 CDS Bphyt_4382 NC_010676.1 439835 441280 D PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B0701 succinate-semialdehyde dehydrogenase (NAD(P)+); aldehyde dehydrogenase 439835..441280 Burkholderia phytofirmans PsJN 6279385 YP_001888130.1 CDS Bphyt_4383 NC_010676.1 441277 442938 D PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_B0702 putative acyl-CoA synthetase; AMP-dependent synthetase and ligase 441277..442938 Burkholderia phytofirmans PsJN 6279322 YP_001888131.1 CDS Bphyt_4384 NC_010676.1 443002 444384 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0703 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein 443002..444384 Burkholderia phytofirmans PsJN 6279532 YP_001888132.1 CDS Bphyt_4385 NC_010676.1 444824 445156 D KEGG: bmu:Bmul_6287 hypothetical protein; hypothetical protein 444824..445156 Burkholderia phytofirmans PsJN 6279388 YP_001888133.1 CDS Bphyt_4386 NC_010676.1 445245 445583 D KEGG: bur:Bcep18194_B0467 hypothetical protein; hypothetical protein 445245..445583 Burkholderia phytofirmans PsJN 6279376 YP_001888134.1 CDS Bphyt_4387 NC_010676.1 445991 447550 D PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bxe:Bxe_A3224 sulphate transporter; sulfate transporter 445991..447550 Burkholderia phytofirmans PsJN 6279526 YP_001888135.1 CDS Bphyt_4389 NC_010676.1 448093 448773 D TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B0708 two component heavy metal response transcriptional regulator, winged helix family; two component heavy metal response winged helix family transcriptional regulator 448093..448773 Burkholderia phytofirmans PsJN 6280145 YP_001888136.1 CDS Bphyt_4390 NC_010676.1 448782 450215 D KEGG: bxe:Bxe_B0709 heavy metal sensor signal transduction histidine kinases (STHK); TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; heavy metal sensor signal transduction histidine kinase 448782..450215 Burkholderia phytofirmans PsJN 6279765 YP_001888137.1 CDS Bphyt_4391 NC_010676.1 450285 450557 R KEGG: bxe:Bxe_B0710 hypothetical protein; hypothetical protein complement(450285..450557) Burkholderia phytofirmans PsJN 6280124 YP_001888138.1 CDS Bphyt_4392 NC_010676.1 450848 451132 D KEGG: bxe:Bxe_B0711 hypothetical protein; hypothetical protein 450848..451132 Burkholderia phytofirmans PsJN 6279274 YP_001888139.1 CDS Bphyt_4393 NC_010676.1 451472 451903 D PFAM: response regulator receiver; KEGG: bxe:Bxe_B0713 response regulator receiver domain protein(CheY); response regulator receiver protein 451472..451903 Burkholderia phytofirmans PsJN 6279572 YP_001888140.1 CDS Bphyt_4394 NC_010676.1 451943 452272 R PFAM: regulatory protein ArsR; KEGG: bxe:Bxe_B0714 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(451943..452272) Burkholderia phytofirmans PsJN 6280085 YP_001888141.1 CDS Bphyt_4395 NC_010676.1 452360 453457 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_B0715 NADH-flavin oxidoreductase / NADH oxidase familyprotein; NADH:flavin oxidoreductase 452360..453457 Burkholderia phytofirmans PsJN 6279142 YP_001888142.1 CDS Bphyt_4396 NC_010676.1 454309 455337 D PFAM: regulatory protein MerR; KEGG: bvi:Bcep1808_5897 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 454309..455337 Burkholderia phytofirmans PsJN 6279309 YP_001888143.1 CDS Bphyt_4397 NC_010676.1 455365 455988 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B0889 sigma-24 (FecI); ECF subfamily RNA polymerase sigma-24 subunit 455365..455988 Burkholderia phytofirmans PsJN 6279378 YP_001888144.1 CDS Bphyt_4398 NC_010676.1 456173 456850 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: bxe:Bxe_B0716 putative pyrimidine reductase; deaminase/reductase domain-containing protein 456173..456850 Burkholderia phytofirmans PsJN 6279282 YP_001888145.1 CDS Bphyt_4399 NC_010676.1 456949 457719 R KEGG: bxe:Bxe_B0717 hypothetical protein; hypothetical protein complement(456949..457719) Burkholderia phytofirmans PsJN 6279443 YP_001888146.1 CDS Bphyt_4400 NC_010676.1 458495 458953 R KEGG: mmu:100044247 hypothetical protein LOC100044247; hypothetical protein complement(458495..458953) Burkholderia phytofirmans PsJN 6279465 YP_001888147.1 CDS Bphyt_4401 NC_010676.1 459304 459729 D TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bxe:Bxe_B0720 phasin; phasin family protein 459304..459729 Burkholderia phytofirmans PsJN 6279768 YP_001888148.1 CDS Bphyt_4402 NC_010676.1 460311 460760 D KEGG: bxe:Bxe_B0721 hypothetical protein; hypothetical protein 460311..460760 Burkholderia phytofirmans PsJN 6280090 YP_001888149.1 CDS Bphyt_4403 NC_010676.1 460772 462049 D KEGG: bxe:Bxe_B0722 hypothetical protein; hypothetical protein 460772..462049 Burkholderia phytofirmans PsJN 6280000 YP_001888150.1 CDS Bphyt_4404 NC_010676.1 462135 463976 R KEGG: bxe:Bxe_B0723 putative adhesin processing HmwC-like protein; adhesin processing HmwC-like protein complement(462135..463976) Burkholderia phytofirmans PsJN 6280386 YP_001888151.1 CDS Bphyt_4405 NC_010676.1 464317 465546 R KEGG: bxe:Bxe_B0724 hypothetical protein; hypothetical protein complement(464317..465546) Burkholderia phytofirmans PsJN 6280290 YP_001888152.1 CDS Bphyt_4406 NC_010676.1 465882 469355 D PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bxe:Bxe_B0725 transglutaminase family protein; transglutaminase domain-containing protein 465882..469355 Burkholderia phytofirmans PsJN 6280358 YP_001888153.1 CDS Bphyt_4407 NC_010676.1 469385 472021 D PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bxe:Bxe_B0726 hypothetical protein; hypothetical protein 469385..472021 Burkholderia phytofirmans PsJN 6280517 YP_001888154.1 CDS Bphyt_4408 NC_010676.1 472018 472908 D PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bxe:Bxe_B0727 transglutaminase family protein; transglutaminase domain-containing protein 472018..472908 Burkholderia phytofirmans PsJN 6279223 YP_001888155.1 CDS Bphyt_4409 NC_010676.1 473096 473845 D PFAM: regulatory protein ArsR; regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B2051 transcriptional regulator, IclR family; IclR family transcriptional regulator 473096..473845 Burkholderia phytofirmans PsJN 6278923 YP_001888156.1 CDS Bphyt_4410 NC_010676.1 473921 474676 D PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bxe:Bxe_B2050 ABC polar amino acid family transporter, periplasmic ligand binding protein; family 3 extracellular solute-binding protein 473921..474676 Burkholderia phytofirmans PsJN 6279700 YP_001888157.1 CDS Bphyt_4411 NC_010676.1 474694 475362 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2049 ABC polar amino acid family transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 474694..475362 Burkholderia phytofirmans PsJN 6279977 YP_001888158.1 CDS Bphyt_4412 NC_010676.1 475359 476135 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A0045 ABC-type transporter, ATPase component: PAAT family; ABC transporter-like protein 475359..476135 Burkholderia phytofirmans PsJN 6279703 YP_001888159.1 CDS Bphyt_4413 NC_010676.1 476132 477094 D catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase 476132..477094 Burkholderia phytofirmans PsJN 6279512 YP_001888160.1 CDS Bphyt_4414 NC_010676.1 477266 477688 D PFAM: regulatory protein MarR; KEGG: bxe:Bxe_B0734 transcriptional regulator, MarR family; MarR family transcriptional regulator 477266..477688 Burkholderia phytofirmans PsJN 6280521 YP_001888161.1 CDS Bphyt_4415 NC_010676.1 477770 478192 D PFAM: regulatory protein MarR; protein of unknown function UPF0074; KEGG: bxe:Bxe_B0735 transcriptional regulator, MarR family; MarR family transcriptional regulator 477770..478192 Burkholderia phytofirmans PsJN 6277703 YP_001888162.1 CDS Bphyt_4416 NC_010676.1 478283 479383 D PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B0736 MFS multidrug efflux pump, membrane fusion protein, EmrA subfamily; secretion protein HlyD family protein 478283..479383 Burkholderia phytofirmans PsJN 6278257 YP_001888163.1 CDS Bphyt_4417 NC_010676.1 479391 480962 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0737 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 479391..480962 Burkholderia phytofirmans PsJN 6278300 YP_001888164.1 CDS Bphyt_4418 NC_010676.1 480973 482406 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B0738 MFS multidrug efflux pump, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 480973..482406 Burkholderia phytofirmans PsJN 6279159 YP_001888165.1 CDS Bphyt_4419 NC_010676.1 482477 483664 D KEGG: bxe:Bxe_B0739 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 482477..483664 Burkholderia phytofirmans PsJN 6278374 YP_001888166.1 CDS Bphyt_4420 NC_010676.1 483861 485138 D TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: bxe:Bxe_B0740 concentrative nucleoside/H+ symporter; nucleoside transporter 483861..485138 Burkholderia phytofirmans PsJN 6279419 YP_001888167.1 CDS Bphyt_4421 NC_010676.1 485154 485543 D TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bxe:Bxe_B0741 cytidine deaminase, homotetrameric; cytidine deaminase 485154..485543 Burkholderia phytofirmans PsJN 6278283 YP_001888168.1 CDS Bphyt_4422 NC_010676.1 485540 486505 D PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: bxe:Bxe_B0742 putative inosine-uridine preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 485540..486505 Burkholderia phytofirmans PsJN 6280482 YP_001888169.1 CDS Bphyt_4423 NC_010676.1 486725 487660 D KEGG: bxe:Bxe_B0743 ketopantoate reductase ApbA/PanE; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 486725..487660 Burkholderia phytofirmans PsJN 6280527 YP_001888170.1 CDS Bphyt_4424 NC_010676.1 487728 488027 D KEGG: bxe:Bxe_B0744 hypothetical protein; hypothetical protein 487728..488027 Burkholderia phytofirmans PsJN 6279826 YP_001888171.1 CDS Bphyt_4425 NC_010676.1 488114 489160 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B0745 ABC polyamine/opine/phosphonate uptake family transporter, periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(488114..489160) Burkholderia phytofirmans PsJN 6279386 YP_001888172.1 CDS Bphyt_4426 NC_010676.1 489193 490320 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0746 putative oxidoreductase; FAD dependent oxidoreductase complement(489193..490320) Burkholderia phytofirmans PsJN 6280502 YP_001888173.1 CDS Bphyt_4427 NC_010676.1 490313 491746 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0747 pyridine nucleotide-disulphide oxidoreductase family protein; BFD (2Fe-2S)-binding domain-containing protein complement(490313..491746) Burkholderia phytofirmans PsJN 6280186 YP_001888174.1 CDS Bphyt_4428 NC_010676.1 491743 492129 R KEGG: bam:Bamb_5373 hypothetical protein; hypothetical protein complement(491743..492129) Burkholderia phytofirmans PsJN 6279138 YP_001888175.1 CDS Bphyt_4429 NC_010676.1 492129 492923 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0748 ABC polyamine/opine/phosphonate uptake family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(492129..492923) Burkholderia phytofirmans PsJN 6279044 YP_001888176.1 CDS Bphyt_4430 NC_010676.1 492963 493877 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0749 ABC polyamine/opine/phosphonate uptake family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(492963..493877) Burkholderia phytofirmans PsJN 6279965 YP_001888177.1 CDS Bphyt_4431 NC_010676.1 493870 494961 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0750 ABC polyamine/opine/phosphonate uptake family transporter, ATPase subunit; ABC transporter-like protein complement(493870..494961) Burkholderia phytofirmans PsJN 6279894 YP_001888178.1 CDS Bphyt_4432 NC_010676.1 495265 496143 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0751 transcriptional regulator, IclR family; IclR family transcriptional regulator 495265..496143 Burkholderia phytofirmans PsJN 6279886 YP_001888179.1 CDS Bphyt_4433 NC_010676.1 496195 497784 R PFAM: outer membrane porin; KEGG: bxe:Bxe_B0752 outer membrane porin for cationic amino acids and peptides; outer membrane porin complement(496195..497784) Burkholderia phytofirmans PsJN 6277866 YP_001888180.1 CDS Bphyt_4434 NC_010676.1 497961 498986 R KEGG: bxe:Bxe_B0753 ABC oligopeptide/dipeptide transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(497961..498986) Burkholderia phytofirmans PsJN 6279902 YP_001888181.1 CDS Bphyt_4435 NC_010676.1 498983 499981 R KEGG: bxe:Bxe_B0754 ABC oligopeptide/dipeptide transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(498983..499981) Burkholderia phytofirmans PsJN 6278636 YP_001888182.1 CDS Bphyt_4436 NC_010676.1 499983 500897 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0755 ABC oligopeptide/dipeptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(499983..500897) Burkholderia phytofirmans PsJN 6280479 YP_001888183.1 CDS Bphyt_4437 NC_010676.1 500901 501839 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0756 ABC oligopeptide/dipeptide transporter, inner membrane subunit; nickel-transporting ATPase complement(500901..501839) Burkholderia phytofirmans PsJN 6280105 YP_001888184.1 CDS Bphyt_4438 NC_010676.1 501857 503473 R PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_B0757 ABC oligopeptide/dipeptide transporter, periplasmic ligand binding protein; family 5 extracellular solute-binding protein complement(501857..503473) Burkholderia phytofirmans PsJN 6279067 YP_001888185.1 CDS Bphyt_4439 NC_010676.1 503655 504227 R PFAM: helix-turn-helix domain protein; protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B0758 transcriptional regulator, XRE family with cupin sensor domain; XRE family transcriptional regulator complement(503655..504227) Burkholderia phytofirmans PsJN 6277979 YP_001888186.1 CDS Bphyt_4440 NC_010676.1 505151 506692 D KEGG: bxe:Bxe_B0759 major facilitator superfamily (MFS) peptide/H+symporter, POT family; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; amino acid/peptide transporter 505151..506692 Burkholderia phytofirmans PsJN 6277769 YP_001888187.1 CDS Bphyt_4441 NC_010676.1 506911 508383 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_B0760 transcriptional regulator, GntR family; GntR family transcriptional regulator 506911..508383 Burkholderia phytofirmans PsJN 6278762 YP_001888188.1 CDS Bphyt_4442 NC_010676.1 508898 509350 D PFAM: histone family protein DNA-binding protein; KEGG: bxe:Bxe_B0762 Bph2; histone family protein DNA-binding protein 508898..509350 Burkholderia phytofirmans PsJN 6277941 YP_001888189.1 CDS Bphyt_4443 NC_010676.1 509755 511164 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bxe:Bxe_B0763 hypothetical protein; hypothetical protein 509755..511164 Burkholderia phytofirmans PsJN 6278735 YP_001888190.1 CDS Bphyt_4444 NC_010676.1 511329 512279 D PFAM: protein of unknown function DUF403; KEGG: bxe:Bxe_B0764 hypothetical protein; hypothetical protein 511329..512279 Burkholderia phytofirmans PsJN 6279366 YP_001888191.1 CDS Bphyt_4445 NC_010676.1 512292 513092 D PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: bxe:Bxe_B0765 transglutaminase family protein; transglutaminase domain-containing protein 512292..513092 Burkholderia phytofirmans PsJN 6279449 YP_001888192.1 CDS Bphyt_4446 NC_010676.1 513266 514138 D KEGG: bxe:Bxe_B0766 hypothetical protein; hypothetical protein 513266..514138 Burkholderia phytofirmans PsJN 6280520 YP_001888193.1 CDS Bphyt_4447 NC_010676.1 514363 515544 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B0768 outer membrane porin, OmpC family; porin complement(514363..515544) Burkholderia phytofirmans PsJN 6280480 YP_001888194.1 CDS Bphyt_4448 NC_010676.1 515963 517294 R PFAM: ribonuclease BN; KEGG: bxe:Bxe_B0769 ribonuclease BN; ribonuclease BN complement(515963..517294) Burkholderia phytofirmans PsJN 6279604 YP_001888195.1 CDS Bphyt_4449 NC_010676.1 517568 518107 D PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bxe:Bxe_B0770 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 517568..518107 Burkholderia phytofirmans PsJN 6279379 YP_001888196.1 CDS Bphyt_4450 NC_010676.1 518424 519983 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bxe:Bxe_B0771 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 518424..519983 Burkholderia phytofirmans PsJN 6279593 YP_001888197.1 CDS Bphyt_4451 NC_010676.1 520014 520460 R KEGG: bxe:Bxe_C0361 response regulator receiver domain protein(CheY); response regulator receiver protein complement(520014..520460) Burkholderia phytofirmans PsJN 6279588 YP_001888198.1 CDS Bphyt_4452 NC_010676.1 520622 522109 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pfo:Pfl_3557 sulphate transporter; sulfate transporter complement(520622..522109) Burkholderia phytofirmans PsJN 6280558 YP_001888199.1 CDS Bphyt_4453 NC_010676.1 522379 522969 R KEGG: bxe:Bxe_B0772 putative lipoprotein; lipoprotein complement(522379..522969) Burkholderia phytofirmans PsJN 6279587 YP_001888200.1 CDS Bphyt_4454 NC_010676.1 523184 524572 R PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: bxe:Bxe_B0773 putative FAD/FMN-containing oxidoreductase; FAD linked oxidase domain-containing protein complement(523184..524572) Burkholderia phytofirmans PsJN 6279566 YP_001888201.1 CDS fabG NC_010676.1 524924 525685 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(524924..525685) Burkholderia phytofirmans PsJN 6279564 YP_001888202.1 CDS Bphyt_4456 NC_010676.1 525714 525911 D hypothetical protein 525714..525911 Burkholderia phytofirmans PsJN 6278129 YP_001888203.1 CDS Bphyt_4457 NC_010676.1 526814 527866 D KEGG: bxe:Bxe_B0776 putative membrane glycoprotein; membrane glycoprotein 526814..527866 Burkholderia phytofirmans PsJN 6277950 YP_001888204.1 CDS Bphyt_4458 NC_010676.1 527879 529039 D KEGG: bxe:Bxe_B0776 putative membrane glycoprotein; membrane glycoprotein 527879..529039 Burkholderia phytofirmans PsJN 6278855 YP_001888205.1 CDS Bphyt_4459 NC_010676.1 528954 529613 R PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B0777 putative phosphoesterase; metallophosphoesterase complement(528954..529613) Burkholderia phytofirmans PsJN 6278298 YP_001888206.1 CDS Bphyt_4460 NC_010676.1 529610 532255 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_B0778 putative DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(529610..532255) Burkholderia phytofirmans PsJN 6280485 YP_001888207.1 CDS Bphyt_4461 NC_010676.1 532472 533350 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sma:SAV3194 hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 532472..533350 Burkholderia phytofirmans PsJN 6280552 YP_001888208.1 CDS Bphyt_4462 NC_010676.1 533398 533748 D PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bxe:Bxe_B0780 putative FKBP-type peptidyl-prolyl cis-transisomerase signal peptide protein; FKBP-type peptidylprolyl isomerase 533398..533748 Burkholderia phytofirmans PsJN 6280455 YP_001888209.1 CDS Bphyt_4463 NC_010676.1 533849 534310 D KEGG: bxe:Bxe_B0781 hypothetical protein; hypothetical protein 533849..534310 Burkholderia phytofirmans PsJN 6280544 YP_001888210.1 CDS Bphyt_4464 NC_010676.1 534358 534669 R KEGG: bxe:Bxe_B0782 hypothetical protein; hypothetical protein complement(534358..534669) Burkholderia phytofirmans PsJN 6280509 YP_001888211.1 CDS Bphyt_4465 NC_010676.1 534930 536003 D KEGG: bxe:Bxe_B0783 hypothetical protein; hypothetical protein 534930..536003 Burkholderia phytofirmans PsJN 6280512 YP_001888212.1 CDS Bphyt_4466 NC_010676.1 536031 536270 R KEGG: bvi:Bcep1808_0035 hypothetical protein; hypothetical protein complement(536031..536270) Burkholderia phytofirmans PsJN 6277749 YP_001888213.1 CDS Bphyt_4467 NC_010676.1 536327 536617 R KEGG: bam:Bamb_0017 hypothetical protein; hypothetical protein complement(536327..536617) Burkholderia phytofirmans PsJN 6277773 YP_001888214.1 CDS Bphyt_4468 NC_010676.1 537221 538072 D PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_B0784 putative histone-like protein; histone family protein nucleoid-structuring protein H-NS 537221..538072 Burkholderia phytofirmans PsJN 6279559 YP_001888215.1 CDS Bphyt_4469 NC_010676.1 538095 538580 D KEGG: bxe:Bxe_B0785 hypothetical protein; hypothetical protein 538095..538580 Burkholderia phytofirmans PsJN 6279522 YP_001888216.1 CDS Bphyt_4470 NC_010676.1 538727 539989 D PFAM: phospholipase D/Transphosphatidylase; KEGG: bxe:Bxe_B0786 putative cardiolipin synthetase; phospholipase D/transphosphatidylase 538727..539989 Burkholderia phytofirmans PsJN 6279504 YP_001888217.1 CDS Bphyt_4471 NC_010676.1 540002 540955 R KEGG: bch:Bcen2424_3546 hypothetical protein; hypothetical protein complement(540002..540955) Burkholderia phytofirmans PsJN 6278848 YP_001888218.1 CDS Bphyt_4472 NC_010676.1 540952 541746 R PFAM: NLPA lipoprotein; KEGG: bmu:Bmul_5128 NlpA lipoprotein; NLPA lipoprotein complement(540952..541746) Burkholderia phytofirmans PsJN 6279570 YP_001888219.1 CDS Bphyt_4473 NC_010676.1 541743 542828 R PFAM: protein of unknown function DUF323; KEGG: bmu:Bmul_5129 protein of unknown function DUF323; hypothetical protein complement(541743..542828) Burkholderia phytofirmans PsJN 6279738 YP_001888220.1 CDS Bphyt_4474 NC_010676.1 542836 544782 R PFAM: sulfatase; KEGG: bcm:Bcenmc03_3976 sulfatase; sulfatase complement(542836..544782) Burkholderia phytofirmans PsJN 6279540 YP_001888221.1 CDS Bphyt_4475 NC_010676.1 544941 545489 R KEGG: bxe:Bxe_B0787 conserved hypothetical signal peptide protein; hypothetical protein complement(544941..545489) Burkholderia phytofirmans PsJN 6280466 YP_001888222.1 CDS Bphyt_4476 NC_010676.1 545599 546246 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B0788 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(545599..546246) Burkholderia phytofirmans PsJN 6278269 YP_001888223.1 CDS Bphyt_4477 NC_010676.1 546243 547658 R PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; Cache type 2 domain protein; KEGG: bxe:Bxe_B0789 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(546243..547658) Burkholderia phytofirmans PsJN 6277343 YP_001888224.1 CDS Bphyt_4478 NC_010676.1 547915 548112 D KEGG: bxe:Bxe_B0790 hypothetical protein; hypothetical protein 547915..548112 Burkholderia phytofirmans PsJN 6278164 YP_001888225.1 CDS Bphyt_4479 NC_010676.1 548109 549590 D PFAM: Na+/solute symporter; KEGG: bxe:Bxe_B0791 Na+/monocarboxylate symporter; Na+/solute symporter 548109..549590 Burkholderia phytofirmans PsJN 6278192 YP_001888226.1 CDS Bphyt_4480 NC_010676.1 549665 550909 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0799 D-amino-acid dehydrogenase; FAD dependent oxidoreductase complement(549665..550909) Burkholderia phytofirmans PsJN 6277457 YP_001888227.1 CDS Bphyt_4483 NC_010676.1 551715 552506 D KEGG: bxe:Bxe_B0802 hypothetical protein; hypothetical protein 551715..552506 Burkholderia phytofirmans PsJN 6278229 YP_001888228.1 CDS Bphyt_4484 NC_010676.1 552517 555135 D PFAM: protein of unknown function DUF802; KEGG: bpm:BURPS1710b_A0266 hypothetical protein; hypothetical protein 552517..555135 Burkholderia phytofirmans PsJN 6278137 YP_001888229.1 CDS Bphyt_4485 NC_010676.1 555132 555779 D PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_B0804 hypothetical protein; hypothetical protein 555132..555779 Burkholderia phytofirmans PsJN 6277560 YP_001888230.1 CDS Bphyt_4486 NC_010676.1 555772 556425 D KEGG: bxe:Bxe_B0805 hypothetical protein; hypothetical protein 555772..556425 Burkholderia phytofirmans PsJN 6279619 YP_001888231.1 CDS Bphyt_4487 NC_010676.1 556479 556799 R KEGG: bxe:Bxe_B0806 hypothetical protein; hypothetical protein complement(556479..556799) Burkholderia phytofirmans PsJN 6280438 YP_001888232.1 CDS Bphyt_4488 NC_010676.1 556893 557645 R PFAM: Integral membrane protein TerC; KEGG: bxe:Bxe_B0807 hypothetical protein; integral membrane protein TerC complement(556893..557645) Burkholderia phytofirmans PsJN 6278797 YP_001888233.1 CDS Bphyt_4489 NC_010676.1 557767 558645 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0808 transcriptional regulator, LysR family; LysR family transcriptional regulator 557767..558645 Burkholderia phytofirmans PsJN 6278798 YP_001888234.1 CDS Bphyt_4490 NC_010676.1 558621 559082 R KEGG: bxe:Bxe_B0809 hypothetical protein; hypothetical protein complement(558621..559082) Burkholderia phytofirmans PsJN 6277655 YP_001888235.1 CDS Bphyt_4491 NC_010676.1 559379 559573 R hypothetical protein complement(559379..559573) Burkholderia phytofirmans PsJN 6277497 YP_001888236.1 CDS Bphyt_4492 NC_010676.1 559951 560271 R KEGG: bxe:Bxe_B0810 hypothetical protein; hypothetical protein complement(559951..560271) Burkholderia phytofirmans PsJN 6278127 YP_001888237.1 CDS Bphyt_4493 NC_010676.1 560457 560654 D KEGG: bxe:Bxe_A3098 hypothetical protein; hypothetical protein 560457..560654 Burkholderia phytofirmans PsJN 6277635 YP_001888238.1 CDS Bphyt_4494 NC_010676.1 560651 561532 D KEGG: bxe:Bxe_B0811 hypothetical protein; hypothetical protein 560651..561532 Burkholderia phytofirmans PsJN 6278330 YP_001888239.1 CDS Bphyt_4495 NC_010676.1 561635 563131 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B0814 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(561635..563131) Burkholderia phytofirmans PsJN 6278394 YP_001888240.1 CDS Bphyt_4496 NC_010676.1 563128 563865 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B0815 two component transcriptional regulator, winged helix family; two component winged helix family transcriptional regulator complement(563128..563865) Burkholderia phytofirmans PsJN 6277553 YP_001888241.1 CDS Bphyt_4497 NC_010676.1 563937 566012 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bxe:Bxe_B0816 putative transmembrane protein; redoxin domain-containing protein 563937..566012 Burkholderia phytofirmans PsJN 6277418 YP_001888242.1 CDS Bphyt_4498 NC_010676.1 566062 566802 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: bxe:Bxe_B0817 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 566062..566802 Burkholderia phytofirmans PsJN 6277498 YP_001888243.1 CDS Bphyt_4500 NC_010676.1 568495 570741 D KEGG: bxe:Bxe_B0820 hypothetical protein; hypothetical protein 568495..570741 Burkholderia phytofirmans PsJN 6277617 YP_001888244.1 CDS Bphyt_4501 NC_010676.1 570962 571450 R KEGG: bxe:Bxe_B0821 hypothetical protein; hypothetical protein complement(570962..571450) Burkholderia phytofirmans PsJN 6277577 YP_001888245.1 CDS Bphyt_4502 NC_010676.1 571480 571704 R KEGG: bxe:Bxe_B0821 hypothetical protein; hypothetical protein complement(571480..571704) Burkholderia phytofirmans PsJN 6277341 YP_001888246.1 CDS Bphyt_4503 NC_010676.1 571955 572629 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B0822 HAD-superfamily hydrolase, subfamily IA, variant3; HAD-superfamily hydrolase 571955..572629 Burkholderia phytofirmans PsJN 6278302 YP_001888247.1 CDS Bphyt_4504 NC_010676.1 572982 573944 D KEGG: bxe:Bxe_B0823 response regulator receiver domain protein(CheY); response regulator receiver protein 572982..573944 Burkholderia phytofirmans PsJN 6277638 YP_001888248.1 CDS Bphyt_4505 NC_010676.1 573969 575411 D PFAM: ATP-binding region ATPase domain protein; KEGG: reu:Reut_B3506 ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 573969..575411 Burkholderia phytofirmans PsJN 6277554 YP_001888249.1 CDS Bphyt_4506 NC_010676.1 575487 576452 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bxe:Bxe_B0824 putative lipase (esterase); alpha/beta hydrolase complement(575487..576452) Burkholderia phytofirmans PsJN 6278353 YP_001888250.1 CDS Bphyt_4507 NC_010676.1 576445 576954 R KEGG: bxe:Bxe_B0825 hypothetical protein; hypothetical protein complement(576445..576954) Burkholderia phytofirmans PsJN 6278437 YP_001888251.1 CDS Bphyt_4508 NC_010676.1 577184 578149 R converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase complement(577184..578149) Burkholderia phytofirmans PsJN 6277606 YP_001888252.1 CDS Bphyt_4509 NC_010676.1 578213 579142 R PFAM: protein of unknown function DUF849; KEGG: bxe:Bxe_B0827 hypothetical protein; hypothetical protein complement(578213..579142) Burkholderia phytofirmans PsJN 6278338 YP_001888253.1 CDS Bphyt_4510 NC_010676.1 579184 580149 R TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bxe:Bxe_B0828 ABC glycine betaine transporter, periplasmic ligand binding protein; choline ABC transporter periplasmic binding protein complement(579184..580149) Burkholderia phytofirmans PsJN 6277626 YP_001888254.1 CDS Bphyt_4511 NC_010676.1 580497 581522 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B0829 transcriptional regulator, AraC family; AraC family transcriptional regulator 580497..581522 Burkholderia phytofirmans PsJN 6278398 YP_001888255.1 CDS Bphyt_4512 NC_010676.1 581632 581958 D KEGG: bxe:Bxe_B0830 hypothetical protein; hypothetical protein 581632..581958 Burkholderia phytofirmans PsJN 6277434 YP_001888256.1 CDS Bphyt_4513 NC_010676.1 582016 582417 R PFAM: helix-turn-helix HxlR type; KEGG: gur:Gura_3513 transcriptional regulator, HxlR family; HxlR family transcriptional regulator complement(582016..582417) Burkholderia phytofirmans PsJN 6278366 YP_001888257.1 CDS Bphyt_4514 NC_010676.1 582488 582913 R PFAM: conserved hypothetical protein; KEGG: bvi:Bcep1808_6067 hypothetical protein; hypothetical protein complement(582488..582913) Burkholderia phytofirmans PsJN 6277552 YP_001888258.1 CDS Bphyt_4515 NC_010676.1 582910 584700 R PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bxe:Bxe_B0922 putative nitrite/sulfite reductase; Sulfite reductase complement(582910..584700) Burkholderia phytofirmans PsJN 6280426 YP_001888259.1 CDS Bphyt_4516 NC_010676.1 585029 585217 D KEGG: bxe:Bxe_B0923 hypothetical protein; hypothetical protein 585029..585217 Burkholderia phytofirmans PsJN 6279542 YP_001888260.1 CDS Bphyt_4517 NC_010676.1 585250 586665 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_B0924 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator complement(585250..586665) Burkholderia phytofirmans PsJN 6279848 YP_001888261.1 CDS Bphyt_4518 NC_010676.1 586887 588347 R TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B0833 succinic semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase complement(586887..588347) Burkholderia phytofirmans PsJN 6277664 YP_001888262.1 CDS Bphyt_4519 NC_010676.1 588358 589641 R TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B0834 4-aminobutyrate aminotransferase; 4-aminobutyrate aminotransferase complement(588358..589641) Burkholderia phytofirmans PsJN 6277856 YP_001888263.1 CDS Bphyt_4520 NC_010676.1 589765 591270 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_B0835 transcriptional regulator, GntR family, with aminotransferase activity; GntR family transcriptional regulator 589765..591270 Burkholderia phytofirmans PsJN 6277845 YP_001888264.1 CDS Bphyt_4521 NC_010676.1 591281 592117 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_B0836 hypothetical protein; hypothetical protein complement(591281..592117) Burkholderia phytofirmans PsJN 6279573 YP_001888265.1 CDS Bphyt_4522 NC_010676.1 592397 593239 R TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0837 ABC phosphonate transporter, inner membrane subunit PhnE; phosphonate ABC transporter inner membrane subunit complement(592397..593239) Burkholderia phytofirmans PsJN 6279767 YP_001888266.1 CDS Bphyt_4523 NC_010676.1 593236 594213 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein; KEGG: bxe:Bxe_B0838 ABC phosphonates transporter, periplasmic ligand binding protein PhnD; phosphonate ABC transporter periplasmic phosphonate binding protein complement(593236..594213) Burkholderia phytofirmans PsJN 6279850 YP_001888267.1 CDS Bphyt_4524 NC_010676.1 594255 595178 R KEGG: bxe:Bxe_B0839 ABC phophonates transporter, ATPase subunit PhnC; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase complement(594255..595178) Burkholderia phytofirmans PsJN 6279936 YP_001888268.1 CDS Bphyt_4525 NC_010676.1 595452 596486 D KEGG: bxe:Bxe_B0840 zinc carboxypeptidase-related protein; zinc carboxypeptidase-like protein 595452..596486 Burkholderia phytofirmans PsJN 6280134 YP_001888269.1 CDS Bphyt_4526 NC_010676.1 596483 597283 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0841 putative hydrolase, alpha/beta fold family; alpha/beta fold family hydrolase 596483..597283 Burkholderia phytofirmans PsJN 6278736 YP_001888270.1 CDS Bphyt_4527 NC_010676.1 597453 602294 D PFAM: NAD-glutamate dehydrogenase; KEGG: bxe:Bxe_B0842 putative NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase 597453..602294 Burkholderia phytofirmans PsJN 6279048 YP_001888271.1 CDS Bphyt_4528 NC_010676.1 602492 603397 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bxe:Bxe_B0843 heavy metal/H+ antiporter, CDF family; cation diffusion facilitator family transporter 602492..603397 Burkholderia phytofirmans PsJN 6278445 YP_001888272.1 CDS Bphyt_4529 NC_010676.1 603414 604394 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B0844 putative aldo/keto reductase; aldo/keto reductase complement(603414..604394) Burkholderia phytofirmans PsJN 6278441 YP_001888273.1 CDS Bphyt_4530 NC_010676.1 604628 605701 D PFAM: purine nucleoside permease; KEGG: bxe:Bxe_B0845 concentrative nucleoside/H+ anitporter, CNT family; purine nucleoside permease 604628..605701 Burkholderia phytofirmans PsJN 6277392 YP_001888274.1 CDS Bphyt_4531 NC_010676.1 605924 606232 R KEGG: bxe:Bxe_B0846 hypothetical protein; hypothetical protein complement(605924..606232) Burkholderia phytofirmans PsJN 6277592 YP_001888275.1 CDS Bphyt_4532 NC_010676.1 606467 607471 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0847 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(606467..607471) Burkholderia phytofirmans PsJN 6277573 YP_001888276.1 CDS Bphyt_4533 NC_010676.1 607634 608518 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bxe:Bxe_B0848 putative carboxylesterase; alpha/beta hydrolase 607634..608518 Burkholderia phytofirmans PsJN 6277585 YP_001888277.1 CDS Bphyt_4534 NC_010676.1 608553 609827 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B0849 RND efflux pump, membrane fusion protein, CzcB subfamily; RND family efflux transporter MFP subunit 608553..609827 Burkholderia phytofirmans PsJN 6277365 YP_001888278.1 CDS Bphyt_4535 NC_010676.1 609884 613069 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B0850 hydrophobe/amphiphile efflux pump, RND family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 609884..613069 Burkholderia phytofirmans PsJN 6278362 YP_001888279.1 CDS Bphyt_4536 NC_010676.1 613083 614684 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B0851 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 613083..614684 Burkholderia phytofirmans PsJN 6278318 YP_001888280.1 CDS Bphyt_4537 NC_010676.1 615060 615899 D PFAM: NLPA lipoprotein; KEGG: bxe:Bxe_B0852 ABC methionine transporter, periplasmic ligand binding protein; NLPA lipoprotein 615060..615899 Burkholderia phytofirmans PsJN 6277582 YP_001888281.1 CDS Bphyt_4538 NC_010676.1 615943 617349 D KEGG: bvi:Bcep1808_3569 flavin-dependent oxidoreductase; flavin-dependent oxidoreductase 615943..617349 Burkholderia phytofirmans PsJN 6280498 YP_001888282.1 CDS Bphyt_4539 NC_010676.1 617368 618528 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0853 ABC methionine transporter, ATPase subunit; ABC transporter-like protein 617368..618528 Burkholderia phytofirmans PsJN 6277435 YP_001888283.1 CDS Bphyt_4540 NC_010676.1 618521 619177 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0854 ABC methionine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 618521..619177 Burkholderia phytofirmans PsJN 6278481 YP_001888284.1 CDS Bphyt_4541 NC_010676.1 619333 620535 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B0855 putative monooxygenase; acyl-CoA dehydrogenase type 2 domain 619333..620535 Burkholderia phytofirmans PsJN 6278128 YP_001888285.1 CDS Bphyt_4542 NC_010676.1 620596 621924 D TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bxe:Bxe_B0856 manganese transport protein MntH; manganese transport protein MntH 620596..621924 Burkholderia phytofirmans PsJN 6277538 YP_001888286.1 CDS Bphyt_4543 NC_010676.1 622063 622632 R with FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC complement(622063..622632) Burkholderia phytofirmans PsJN 6277468 YP_001888287.1 CDS Bphyt_4544 NC_010676.1 622647 622967 R with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD complement(622647..622967) Burkholderia phytofirmans PsJN 6277482 YP_001888288.1 CDS Bphyt_4545 NC_010676.1 623501 624724 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bmu:Bmul_3826 protein of unknown function DUF395 YeeE/YedE; hypothetical protein complement(623501..624724) Burkholderia phytofirmans PsJN 6277377 YP_001888289.1 CDS Bphyt_4546 NC_010676.1 624895 625434 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0859 putative acetyltransferase; N-acetyltransferase GCN5 complement(624895..625434) Burkholderia phytofirmans PsJN 6277532 YP_001888290.1 CDS Bphyt_4547 NC_010676.1 625508 626374 R PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_B0860 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(625508..626374) Burkholderia phytofirmans PsJN 6277426 YP_001888291.1 CDS Bphyt_4548 NC_010676.1 626548 626850 R TIGRFAM: addiction module antidote protein; KEGG: bxe:Bxe_B0861 predicted transcriptional regulator; transcriptional regulator complement(626548..626850) Burkholderia phytofirmans PsJN 6279253 YP_001888292.1 CDS Bphyt_4549 NC_010676.1 626847 627218 R TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: bxe:Bxe_B0862 hypothetical protein; addiction module killer protein complement(626847..627218) Burkholderia phytofirmans PsJN 6277824 YP_001888293.1 CDS Bphyt_4550 NC_010676.1 627493 627861 D KEGG: bxe:Bxe_B0863 hypothetical protein; hypothetical protein 627493..627861 Burkholderia phytofirmans PsJN 6277833 YP_001888294.1 CDS Bphyt_4551 NC_010676.1 627889 628239 D KEGG: bxe:Bxe_B0864 hypothetical protein; hypothetical protein 627889..628239 Burkholderia phytofirmans PsJN 6280131 YP_001888295.1 CDS Bphyt_4552 NC_010676.1 628410 628874 D PFAM: RbsD or FucU transport; KEGG: bxe:Bxe_B0865 RbsD or FucU transport; transport protein RbsD/FucU 628410..628874 Burkholderia phytofirmans PsJN 6278962 YP_001888296.1 CDS Bphyt_4553 NC_010676.1 629030 629437 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0866 putative glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 629030..629437 Burkholderia phytofirmans PsJN 6280048 YP_001888297.1 CDS Bphyt_4554 NC_010676.1 629651 630082 D PFAM: DoxX family protein; KEGG: bxe:Bxe_B0867 conserved hypothetical membrane protein YphA; DoxX family protein 629651..630082 Burkholderia phytofirmans PsJN 6279631 YP_001888298.1 CDS Bphyt_4555 NC_010676.1 630147 630419 D KEGG: bxe:Bxe_B0868 hypothetical protein; hypothetical protein 630147..630419 Burkholderia phytofirmans PsJN 6278853 YP_001888299.1 CDS Bphyt_4556 NC_010676.1 630539 632023 R PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4907 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(630539..632023) Burkholderia phytofirmans PsJN 6280350 YP_001888300.1 CDS Bphyt_4557 NC_010676.1 632171 633472 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0871 major facilitator superfamily (MFS)metabolite/H+ symporter; major facilitator superfamily protein complement(632171..633472) Burkholderia phytofirmans PsJN 6278843 YP_001888301.1 CDS Bphyt_4558 NC_010676.1 633871 634611 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B0872 two component transcriptional regulator, winged helix family; two component winged helix family transcriptional regulator 633871..634611 Burkholderia phytofirmans PsJN 6277534 YP_001888302.1 CDS Bphyt_4559 NC_010676.1 634632 635537 R PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B0873 putative dihydrodipicolinate synthase; dihydrodipicolinate synthetase complement(634632..635537) Burkholderia phytofirmans PsJN 6277404 YP_001888303.1 CDS Bphyt_4560 NC_010676.1 635819 636844 D PFAM: proline racemase; KEGG: bxe:Bxe_B0874 putative proline racemase; proline racemase 635819..636844 Burkholderia phytofirmans PsJN 6277656 YP_001888304.1 CDS Bphyt_4561 NC_010676.1 636841 637968 D PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0875 putative oxidoreductase; FAD dependent oxidoreductase 636841..637968 Burkholderia phytofirmans PsJN 6278169 YP_001888305.1 CDS Bphyt_4562 NC_010676.1 637961 639736 D PFAM: ferredoxin; HI0933 family protein; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0877 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 637961..639736 Burkholderia phytofirmans PsJN 6278600 YP_001888306.1 CDS Bphyt_4563 NC_010676.1 640131 640898 D PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: bxe:Bxe_B0878 transcriptional regulator, AraC family; AraC family transcriptional regulator 640131..640898 Burkholderia phytofirmans PsJN 6278062 YP_001888307.1 CDS Bphyt_4564 NC_010676.1 640909 641238 D KEGG: bxe:Bxe_B0879 hypothetical protein; hypothetical protein 640909..641238 Burkholderia phytofirmans PsJN 6280537 YP_001888308.1 CDS Bphyt_4565 NC_010676.1 641360 641620 R KEGG: bxe:Bxe_B0880 hypothetical protein; hypothetical protein complement(641360..641620) Burkholderia phytofirmans PsJN 6278172 YP_001888309.1 CDS Bphyt_4566 NC_010676.1 641778 642110 R KEGG: bxe:Bxe_B0881 hypothetical protein; hypothetical protein complement(641778..642110) Burkholderia phytofirmans PsJN 6278862 YP_001888310.1 CDS Bphyt_4567 NC_010676.1 642301 644184 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: bxe:Bxe_B0882 4-hydroxyphenylpyruvate dioxygenase; xylose isomerase domain-containing protein complement(642301..644184) Burkholderia phytofirmans PsJN 6278113 YP_001888311.1 CDS Bphyt_4568 NC_010676.1 644503 644958 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 644503..644958 Burkholderia phytofirmans PsJN 6278688 YP_001888312.1 CDS Bphyt_4569 NC_010676.1 644955 645869 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 644955..645869 Burkholderia phytofirmans PsJN 6280053 YP_001888313.1 CDS Bphyt_4570 NC_010676.1 645919 647295 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0885 major facilitator superfamily (MFS)metabolite/H+ symporter; major facilitator superfamily protein 645919..647295 Burkholderia phytofirmans PsJN 6278851 YP_001888314.1 CDS Bphyt_4571 NC_010676.1 647366 648061 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B0886 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(647366..648061) Burkholderia phytofirmans PsJN 6278526 YP_001888315.1 CDS Bphyt_4572 NC_010676.1 648156 649436 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0887 putative FAD-binding oxidoreductase; FAD dependent oxidoreductase complement(648156..649436) Burkholderia phytofirmans PsJN 6278644 YP_001888316.1 CDS Bphyt_4573 NC_010676.1 649568 650350 R KEGG: bxe:Bxe_B0888 hypothetical protein; hypothetical protein complement(649568..650350) Burkholderia phytofirmans PsJN 6277403 YP_001888317.1 CDS Bphyt_4574 NC_010676.1 650350 650919 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B0889 sigma-24 (FecI); ECF subfamily RNA polymerase sigma-24 subunit complement(650350..650919) Burkholderia phytofirmans PsJN 6278217 YP_001888318.1 CDS Bphyt_4575 NC_010676.1 651362 652294 R PFAM: dihydrodipicolinate synthetase; KEGG: reh:H16_B0213 dihydrodipicolinate synthase; dihydrodipicolinate synthetase complement(651362..652294) Burkholderia phytofirmans PsJN 6280382 YP_001888319.1 CDS Bphyt_4576 NC_010676.1 652473 653456 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0214 transcriptional regulator, LysR-family; LysR family transcriptional regulator 652473..653456 Burkholderia phytofirmans PsJN 6278021 YP_001888320.1 CDS Bphyt_4577 NC_010676.1 653652 656732 D KEGG: bxe:Bxe_B0890 hypothetical protein; hypothetical protein 653652..656732 Burkholderia phytofirmans PsJN 6279080 YP_001888321.1 CDS Bphyt_4578 NC_010676.1 656785 658011 R PFAM: ROK family protein; KEGG: bxe:Bxe_B0891 ROK; ROK family protein complement(656785..658011) Burkholderia phytofirmans PsJN 6280210 YP_001888322.1 CDS Bphyt_4579 NC_010676.1 658042 658839 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0892 ABC sugar transporter, ATPase subunit; ABC transporter-like protein complement(658042..658839) Burkholderia phytofirmans PsJN 6280097 YP_001888323.1 CDS Bphyt_4580 NC_010676.1 658859 659845 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B0893 ABC sugar transporter, inner membrane subunit; monosaccharide-transporting ATPase complement(658859..659845) Burkholderia phytofirmans PsJN 6278701 YP_001888324.1 CDS Bphyt_4581 NC_010676.1 659938 660942 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B0894 ABC sugar transporter, periplasmic ligand binding protein; monosaccharide-transporting ATPase complement(659938..660942) Burkholderia phytofirmans PsJN 6277844 YP_001888325.1 CDS Bphyt_4582 NC_010676.1 661389 662162 R PFAM: type IV pilus assembly PilZ; YcgR family protein; KEGG: bxe:Bxe_B0896 putative YcgR-like protein; YcgR family protein complement(661389..662162) Burkholderia phytofirmans PsJN 6278120 YP_001888326.1 CDS Bphyt_4583 NC_010676.1 662413 663444 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_3829 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator complement(662413..663444) Burkholderia phytofirmans PsJN 6278858 YP_001888327.1 CDS Bphyt_4584 NC_010676.1 663638 664792 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmu:Bmul_3198 ABC transporter related; ABC transporter-like protein 663638..664792 Burkholderia phytofirmans PsJN 6278903 YP_001888328.1 CDS Bphyt_4585 NC_010676.1 664804 666786 D PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; KEGG: bam:Bamb_4931 beta-galactosidase; beta-galactosidase 664804..666786 Burkholderia phytofirmans PsJN 6279594 YP_001888329.1 CDS Bphyt_4586 NC_010676.1 666876 668129 D PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_5658 extracellular solute-binding protein, family 1; family 1 extracellular solute-binding protein 666876..668129 Burkholderia phytofirmans PsJN 6277718 YP_001888330.1 CDS Bphyt_4587 NC_010676.1 668275 669252 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcm:Bcenmc03_4576 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 668275..669252 Burkholderia phytofirmans PsJN 6277716 YP_001888331.1 CDS Bphyt_4588 NC_010676.1 669263 670114 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvi:Bcep1808_3824 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 669263..670114 Burkholderia phytofirmans PsJN 6279405 YP_001888332.1 CDS Bphyt_4589 NC_010676.1 670686 673034 D KEGG: bxe:Bxe_A3114 hypothetical protein; hypothetical protein 670686..673034 Burkholderia phytofirmans PsJN 6279996 YP_001888333.1 CDS Bphyt_4591 NC_010676.1 674967 675467 D KEGG: bxe:Bxe_A1492 hypothetical protein; hypothetical protein 674967..675467 Burkholderia phytofirmans PsJN 6280224 YP_001888334.1 CDS Bphyt_4592 NC_010676.1 675513 676196 R TIGRFAM: TonB family protein; KEGG: bxe:Bxe_B0897 TonB protein; TonB family protein complement(675513..676196) Burkholderia phytofirmans PsJN 6278045 YP_001888335.1 CDS Bphyt_4593 NC_010676.1 676201 676599 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bxe:Bxe_B0898 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(676201..676599) Burkholderia phytofirmans PsJN 6280238 YP_001888336.1 CDS Bphyt_4594 NC_010676.1 676596 677243 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_B0899 biopolymer transport protein, MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel complement(676596..677243) Burkholderia phytofirmans PsJN 6278068 YP_001888337.1 CDS Bphyt_4595 NC_010676.1 677270 679615 R PFAM: TonB-dependent receptor; Cna B domain protein; TonB-dependent receptor plug; KEGG: bxe:Bxe_B0900 TonB-dependent siderophore receptor; TonB-dependent receptor complement(677270..679615) Burkholderia phytofirmans PsJN 6278125 YP_001888338.1 CDS Bphyt_4596 NC_010676.1 680177 680971 R KEGG: bja:bll0272 hypothetical protein; hypothetical protein complement(680177..680971) Burkholderia phytofirmans PsJN 6278230 YP_001888339.1 CDS Bphyt_4597 NC_010676.1 681088 681438 R KEGG: bxe:Bxe_B0901 hypothetical protein; hypothetical protein complement(681088..681438) Burkholderia phytofirmans PsJN 6277721 YP_001888340.1 CDS Bphyt_4598 NC_010676.1 682116 683360 D PFAM: cyclic nucleotide-binding; KEGG: bxe:Bxe_C1377 cyclic nucleotide-binding domain (cNMP-BD)protein; cyclic nucleotide-binding protein 682116..683360 Burkholderia phytofirmans PsJN 6277841 YP_001888341.1 CDS Bphyt_4599 NC_010676.1 683433 684197 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_C1376 putative flagellar motor protein (MotA); MotA/TolQ/ExbB proton channel 683433..684197 Burkholderia phytofirmans PsJN 6280272 YP_001888342.1 CDS Bphyt_4600 NC_010676.1 684247 684915 D PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_C1375 putative flagellar motor protein (MotB); OmpA/MotB domain-containing protein 684247..684915 Burkholderia phytofirmans PsJN 6277837 YP_001888343.1 CDS Bphyt_4601 NC_010676.1 685061 685309 R KEGG: bam:Bamb_5734 hypothetical protein; hypothetical protein complement(685061..685309) Burkholderia phytofirmans PsJN 6280165 YP_001888344.1 CDS Bphyt_4602 NC_010676.1 685523 686089 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bur:Bcep18194_B0397 hypothetical protein; redoxin domain-containing protein complement(685523..686089) Burkholderia phytofirmans PsJN 6279950 YP_001888345.1 CDS Bphyt_4603 NC_010676.1 686300 686671 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bur:Bcep18194_A4872 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 686300..686671 Burkholderia phytofirmans PsJN 6278084 YP_001888346.1 CDS Bphyt_4604 NC_010676.1 686798 687538 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bmu:Bmul_3459 two component transcriptional regulator, winged helix family; two component winged helix family transcriptional regulator 686798..687538 Burkholderia phytofirmans PsJN 6280101 YP_001888347.1 CDS Bphyt_4605 NC_010676.1 687535 688860 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bmu:Bmul_3460 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 687535..688860 Burkholderia phytofirmans PsJN 6279334 YP_001888348.1 CDS Bphyt_4606 NC_010676.1 688891 690564 R PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0903 thioredoxin reductase; cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(688891..690564) Burkholderia phytofirmans PsJN 6279262 YP_001888349.1 CDS Bphyt_4607 NC_010676.1 690879 692795 D KEGG: bxe:Bxe_B0905 hypothetical protein; hypothetical protein 690879..692795 Burkholderia phytofirmans PsJN 6279776 YP_001888350.1 CDS Bphyt_4608 NC_010676.1 692882 693214 D KEGG: bxe:Bxe_B0906 hypothetical protein; hypothetical protein 692882..693214 Burkholderia phytofirmans PsJN 6278678 YP_001888351.1 CDS Bphyt_4610 NC_010676.1 693548 694387 R PFAM: metallophosphoesterase; KEGG: ppg:PputGB1_3471 phosphoprotein phosphatase; metallophosphoesterase complement(693548..694387) Burkholderia phytofirmans PsJN 6279645 YP_001888352.1 CDS Bphyt_4611 NC_010676.1 695754 695930 D PFAM: Flp/Fap pilin component; KEGG: reh:H16_A0722 flp pilus assembly protein, pilin Flp; Flp/Fap pilin component 695754..695930 Burkholderia phytofirmans PsJN 6278920 YP_001888353.1 CDS Bphyt_4612 NC_010676.1 696070 696606 D PFAM: peptidase A24A prepilin type IV; KEGG: reh:H16_A0720 flp pilus assembly leader peptidase CpaA; peptidase A24A prepilin type IV 696070..696606 Burkholderia phytofirmans PsJN 6278244 YP_001888354.1 CDS Bphyt_4613 NC_010676.1 696668 697477 D TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RSc0656 probable pilus assembly transmembrane protein; Flp pilus assembly protein CpaB 696668..697477 Burkholderia phytofirmans PsJN 6278122 YP_001888355.1 CDS Bphyt_4614 NC_010676.1 697566 699353 D PFAM: type II and III secretion system protein; transport-associated; KEGG: rso:RSc0655 probable outer membrane channel protein; type II and III secretion system protein 697566..699353 Burkholderia phytofirmans PsJN 6277906 YP_001888356.1 CDS Bphyt_4615 NC_010676.1 699378 699671 D KEGG: rso:RSc0654 probable lipoprotein; lipoprotein 699378..699671 Burkholderia phytofirmans PsJN 6278807 YP_001888357.1 CDS Bphyt_4616 NC_010676.1 699718 700920 D KEGG: bxe:Bxe_B1187 putative pilus assembly protein CpaE; pilus assembly protein CpaE 699718..700920 Burkholderia phytofirmans PsJN 6279430 YP_001888358.1 CDS Bphyt_4617 NC_010676.1 700975 702357 D PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: rso:RSc0652 probable secretion ATPase protein; type II secretion system protein E 700975..702357 Burkholderia phytofirmans PsJN 6278943 YP_001888359.1 CDS Bphyt_4618 NC_010676.1 702385 703362 D PFAM: type II secretion system protein; KEGG: bam:Bamb_6299 type II secretion system protein; type II secretion system protein 702385..703362 Burkholderia phytofirmans PsJN 6279285 YP_001888360.1 CDS Bphyt_4619 NC_010676.1 703406 704362 D PFAM: type II secretion system protein; KEGG: rme:Rmet_0639 type II secretion system protein; type II secretion system protein 703406..704362 Burkholderia phytofirmans PsJN 6278904 YP_001888361.1 CDS Bphyt_4620 NC_010676.1 704389 705255 D PFAM: fatty acid hydroxylase; KEGG: ana:all2658 hypothetical protein; fatty acid hydroxylase 704389..705255 Burkholderia phytofirmans PsJN 6279462 YP_001888362.1 CDS Bphyt_4621 NC_010676.1 705252 705782 D PFAM: TadE family protein; KEGG: sat:SYN_01503 hypothetical membrane protein; TadE family protein 705252..705782 Burkholderia phytofirmans PsJN 6279383 YP_001888363.1 CDS Bphyt_4622 NC_010676.1 705784 706413 D PFAM: TadE family protein; KEGG: sat:SYN_01504 hypothetical membrane protein; TadE family protein 705784..706413 Burkholderia phytofirmans PsJN 6280128 YP_001888364.1 CDS Bphyt_4623 NC_010676.1 706467 707822 D PFAM: von Willebrand factor type A; KEGG: sus:Acid_4543 von Willebrand factor, type A; hypothetical protein 706467..707822 Burkholderia phytofirmans PsJN 6278142 YP_001888365.1 CDS Bphyt_4624 NC_010676.1 707830 708543 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bte:BTH_II1380 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 707830..708543 Burkholderia phytofirmans PsJN 6277966 YP_001888366.1 CDS Bphyt_4625 NC_010676.1 708607 710145 R PFAM: Propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: bxe:Bxe_B0908 putative integral membrane protein; propeptide PepSY amd peptidase M4 complement(708607..710145) Burkholderia phytofirmans PsJN 6278043 YP_001888367.1 CDS Bphyt_4626 NC_010676.1 710220 712634 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_B0909 TonB-dependent siderophore receptor; TonB-dependent receptor complement(710220..712634) Burkholderia phytofirmans PsJN 6278658 YP_001888368.1 CDS Bphyt_4627 NC_010676.1 712717 713127 R KEGG: bxe:Bxe_B0910 hypothetical protein; hypothetical protein complement(712717..713127) Burkholderia phytofirmans PsJN 6277670 YP_001888369.1 CDS Bphyt_4628 NC_010676.1 713401 715545 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_B0911 TPR domain protein; hypothetical protein 713401..715545 Burkholderia phytofirmans PsJN 6280164 YP_001888370.1 CDS Bphyt_4629 NC_010676.1 715538 716536 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C6622 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(715538..716536) Burkholderia phytofirmans PsJN 6278844 YP_001888371.1 CDS Bphyt_4630 NC_010676.1 716598 717713 D KEGG: dac:Daci_0547 hypothetical protein; hypothetical protein 716598..717713 Burkholderia phytofirmans PsJN 6278303 YP_001888372.1 CDS Bphyt_4631 NC_010676.1 717761 719089 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: bcn:Bcen_5849 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 717761..719089 Burkholderia phytofirmans PsJN 6280011 YP_001888373.1 CDS Bphyt_4632 NC_010676.1 719141 720247 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B0172 outer membrane porin, OmpC family; porin 719141..720247 Burkholderia phytofirmans PsJN 6280056 YP_001888374.1 CDS Bphyt_4633 NC_010676.1 720276 720872 R KEGG: bxe:Bxe_B0917 hypothetical protein; hypothetical protein complement(720276..720872) Burkholderia phytofirmans PsJN 6279997 YP_001888375.1 CDS Bphyt_4635 NC_010676.1 721638 722186 D KEGG: bxe:Bxe_B0918 hypothetical protein; hypothetical protein 721638..722186 Burkholderia phytofirmans PsJN 6277791 YP_001888376.1 CDS Bphyt_4636 NC_010676.1 722300 723157 D PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_B0919 transcriptional regulator, XRE family; XRE family transcriptional regulator 722300..723157 Burkholderia phytofirmans PsJN 6278571 YP_001888377.1 CDS Bphyt_4637 NC_010676.1 723217 724410 R PFAM: porin Gram-negative type; KEGG: bmu:Bmul_3463 porin gram-negative type; porin complement(723217..724410) Burkholderia phytofirmans PsJN 6278734 YP_001888378.1 CDS Bphyt_4638 NC_010676.1 724604 725959 R PFAM: cytochrome c class I; KEGG: bmu:Bmul_4380 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase complement(724604..725959) Burkholderia phytofirmans PsJN 6278035 YP_001888379.1 CDS Bphyt_4639 NC_010676.1 725956 727734 R PFAM: glucose-methanol-choline oxidoreductase; KEGG: bur:Bcep18194_B1793 glucose-methanol-choline oxidoreductase; gluconate 2-dehydrogenase complement(725956..727734) Burkholderia phytofirmans PsJN 6277739 YP_001888380.1 CDS Bphyt_4640 NC_010676.1 727734 728474 R KEGG: bur:Bcep18194_B1794 hypothetical protein; gluconate 2-dehydrogenase complement(727734..728474) Burkholderia phytofirmans PsJN 6277756 YP_001888381.1 CDS Bphyt_4641 NC_010676.1 728842 729639 R KEGG: bxe:Bxe_C1294 hypothetical protein; hypothetical protein complement(728842..729639) Burkholderia phytofirmans PsJN 6278740 YP_001888382.1 CDS Bphyt_4642 NC_010676.1 729666 731936 R KEGG: bxe:Bxe_C1293 hypothetical protein; hypothetical protein complement(729666..731936) Burkholderia phytofirmans PsJN 6278065 YP_001888383.1 CDS Bphyt_4643 NC_010676.1 732189 732854 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_C1292 transcriptional regulator, GntR family; GntR family transcriptional regulator 732189..732854 Burkholderia phytofirmans PsJN 6278268 YP_001888384.1 CDS Bphyt_4644 NC_010676.1 732986 733306 D PFAM: protein of unknown function DUF1330; KEGG: bur:Bcep18194_B2715 protein of unknown function DUF1330; hypothetical protein 732986..733306 Burkholderia phytofirmans PsJN 6278755 YP_001888385.1 CDS Bphyt_4645 NC_010676.1 733579 734481 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_3607 transcriptional regulator, LysR family; LysR family transcriptional regulator 733579..734481 Burkholderia phytofirmans PsJN 6277829 YP_001888386.1 CDS Bphyt_4646 NC_010676.1 734683 736650 D PFAM: aconitate hydratase domain protein; KEGG: scl:sce8685 3-isopropylmalate dehydratase; 3-isopropylmalate dehydratase 734683..736650 Burkholderia phytofirmans PsJN 6278614 YP_001888387.1 CDS Bphyt_4647 NC_010676.1 736773 738239 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0920 major facilitator superfamily (MFS)metabolite/H+ symporter; major facilitator superfamily protein 736773..738239 Burkholderia phytofirmans PsJN 6280203 YP_001888388.1 CDS Bphyt_4648 NC_010676.1 738280 740211 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bte:BTH_II0077 hypothetical protein; SMP-30/gluconolaconase/LRE domain-containing protein complement(738280..740211) Burkholderia phytofirmans PsJN 6280068 YP_001888389.1 CDS Bphyt_4649 NC_010676.1 740374 741030 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bpt:Bpet4197 transcriptional regulator, GntR-family; GntR family transcriptional regulator complement(740374..741030) Burkholderia phytofirmans PsJN 6279613 YP_001888390.1 CDS Bphyt_4650 NC_010676.1 741256 743040 D PFAM: gamma-glutamyltranspeptidase; KEGG: atc:AGR_L_319 gamma-glutamyltranspeptidase; gamma-glutamyltransferase 741256..743040 Burkholderia phytofirmans PsJN 6278653 YP_001888391.1 CDS Bphyt_4651 NC_010676.1 743089 744501 D PFAM: General substrate transporter; protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bja:bll5496 hypothetical metabolite transport protein; major facilitator superfamily protein 743089..744501 Burkholderia phytofirmans PsJN 6280402 YP_001888392.1 CDS Bphyt_4652 NC_010676.1 744535 745089 D PFAM: GAF domain protein; KEGG: vei:Veis_0546 putative GAF sensor protein; GAF sensor protein 744535..745089 Burkholderia phytofirmans PsJN 6280095 YP_001888393.1 CDS Bphyt_4653 NC_010676.1 745091 746359 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bov:BOV_A0199 cis,cis-muconate transport protein MucK; major facilitator superfamily protein 745091..746359 Burkholderia phytofirmans PsJN 6278297 YP_001888394.1 CDS Bphyt_4654 NC_010676.1 746386 747366 R PFAM: Luciferase-like monooxygenase; KEGG: bxe:Bxe_B0928 putative luciferase-like monooxygenase; luciferase-like monooxygenase complement(746386..747366) Burkholderia phytofirmans PsJN 6279139 YP_001888395.1 CDS Bphyt_4655 NC_010676.1 747415 749790 R Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II complement(747415..749790) Burkholderia phytofirmans PsJN 6279408 YP_001888396.1 CDS Bphyt_4656 NC_010676.1 750019 750444 D PFAM: PRC-barrel domain protein; KEGG: bxe:Bxe_B0930 hypothetical protein; PRC-barrel domain-containing protein 750019..750444 Burkholderia phytofirmans PsJN 6278479 YP_001888397.1 CDS Bphyt_4657 NC_010676.1 750642 751652 R KEGG: bxe:Bxe_B0931 hypothetical protein; hypothetical protein complement(750642..751652) Burkholderia phytofirmans PsJN 6280351 YP_001888398.1 CDS Bphyt_4658 NC_010676.1 751856 753205 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0934 putative oxidoreductase; FAD dependent oxidoreductase complement(751856..753205) Burkholderia phytofirmans PsJN 6278846 YP_001888399.1 CDS Bphyt_4659 NC_010676.1 753205 754497 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0935 putative oxidoreductase; FAD dependent oxidoreductase complement(753205..754497) Burkholderia phytofirmans PsJN 6279990 YP_001888400.1 CDS Bphyt_4660 NC_010676.1 754569 756143 R KEGG: bxe:Bxe_B0936 hypothetical protein; hypothetical protein complement(754569..756143) Burkholderia phytofirmans PsJN 6279190 YP_001888401.1 CDS Bphyt_4661 NC_010676.1 756182 757093 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0937 ABC putrescine transporter, inner membrane subunit PotI; ornithine carbamoyltransferase complement(756182..757093) Burkholderia phytofirmans PsJN 6277888 YP_001888402.1 CDS Bphyt_4662 NC_010676.1 757090 758064 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0938 ABC putrescine transporter, inner membrane subunit PotH; binding-protein-dependent transport system inner membrane protein complement(757090..758064) Burkholderia phytofirmans PsJN 6279617 YP_001888403.1 CDS Bphyt_4663 NC_010676.1 758061 759224 R TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0939 ABC putrescine transporter, ATPase subunit PotG; spermidine/putrescine ABC transporter ATPase complement(758061..759224) Burkholderia phytofirmans PsJN 6278966 YP_001888404.1 CDS Bphyt_4664 NC_010676.1 759437 760558 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B0940 ABC putrescine transporter, periplasmic ligand binding protein PotF; family 1 extracellular solute-binding protein complement(759437..760558) Burkholderia phytofirmans PsJN 6278175 YP_001888405.1 CDS Bphyt_4665 NC_010676.1 760632 762080 R PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B0941 putative aminotransferase; aminotransferase complement(760632..762080) Burkholderia phytofirmans PsJN 6279039 YP_001888406.1 CDS Bphyt_4666 NC_010676.1 762109 763443 R PFAM: glutamine synthetase catalytic region; KEGG: bxe:Bxe_B0942 glutamate--ammonia ligase; glutamate--putrescine ligase complement(762109..763443) Burkholderia phytofirmans PsJN 6280044 YP_001888407.1 CDS Bphyt_4667 NC_010676.1 763476 764270 R PFAM: peptidase C26; KEGG: bxe:Bxe_B0943 putative glutamine amidotransferase; peptidase C26 complement(763476..764270) Burkholderia phytofirmans PsJN 6278671 YP_001888408.1 CDS Bphyt_4668 NC_010676.1 765242 765793 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B0944 transcriptional regulator, XRE family with cupin sensor domain; XRE family transcriptional regulator 765242..765793 Burkholderia phytofirmans PsJN 6278662 YP_001888409.1 CDS Bphyt_4669 NC_010676.1 765909 767402 D PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B0945 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase 765909..767402 Burkholderia phytofirmans PsJN 6277784 YP_001888410.1 CDS Bphyt_4671 NC_010676.1 767651 768847 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0947 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(767651..768847) Burkholderia phytofirmans PsJN 6277762 YP_001888411.1 CDS Bphyt_4672 NC_010676.1 768844 769377 R PFAM: regulatory protein MarR; KEGG: bxe:Bxe_B0948 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(768844..769377) Burkholderia phytofirmans PsJN 6277729 YP_001888412.1 CDS Bphyt_4673 NC_010676.1 769494 770513 R KEGG: bxe:Bxe_B0949 putative transmembrane protein; transmembrane protein complement(769494..770513) Burkholderia phytofirmans PsJN 6278263 YP_001888413.1 CDS Bphyt_4674 NC_010676.1 770833 771249 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: reu:Reut_A1493 cupin:Cupin region; cupin complement(770833..771249) Burkholderia phytofirmans PsJN 6279114 YP_001888414.1 CDS Bphyt_4675 NC_010676.1 771433 772038 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B0950 alkylhydroperoxidase AhpD; peroxidase-like protein 771433..772038 Burkholderia phytofirmans PsJN 6278633 YP_001888415.1 CDS Bphyt_4676 NC_010676.1 772117 773367 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0951 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(772117..773367) Burkholderia phytofirmans PsJN 6280279 YP_001888416.1 CDS Bphyt_4677 NC_010676.1 773475 774413 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0952 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(773475..774413) Burkholderia phytofirmans PsJN 6277683 YP_001888417.1 CDS Bphyt_4678 NC_010676.1 774648 775379 D PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bxe:Bxe_B0953 hypothetical protein; hypothetical protein 774648..775379 Burkholderia phytofirmans PsJN 6279438 YP_001888418.1 CDS Bphyt_4680 NC_010676.1 775730 777703 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_B0954 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase complement(775730..777703) Burkholderia phytofirmans PsJN 6280205 YP_001888419.1 CDS Bphyt_4681 NC_010676.1 777889 778272 R KEGG: bxe:Bxe_B0955 hypothetical protein; hypothetical protein complement(777889..778272) Burkholderia phytofirmans PsJN 6279401 YP_001888420.1 CDS Bphyt_4682 NC_010676.1 778623 778901 D PFAM: histone family protein DNA-binding protein; KEGG: bxe:Bxe_B0956 DNA-binding protein HU-alpha; histone family protein DNA-binding protein 778623..778901 Burkholderia phytofirmans PsJN 6279292 YP_001888421.1 CDS Bphyt_4683 NC_010676.1 779105 780223 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(779105..780223) Burkholderia phytofirmans PsJN 6279901 YP_001888422.1 CDS Bphyt_4684 NC_010676.1 780351 781172 R PFAM: protein of unknown function DUF72; KEGG: bxe:Bxe_B0958 hypothetical protein; hypothetical protein complement(780351..781172) Burkholderia phytofirmans PsJN 6279549 YP_001888423.1 CDS Bphyt_4685 NC_010676.1 781278 782057 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B0959 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(781278..782057) Burkholderia phytofirmans PsJN 6278748 YP_001888424.1 CDS Bphyt_4686 NC_010676.1 782334 783515 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B0960 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 782334..783515 Burkholderia phytofirmans PsJN 6279484 YP_001888425.1 CDS Bphyt_4687 NC_010676.1 783565 785172 D PFAM: carboxyl transferase; KEGG: bxe:Bxe_B0961 propionyl-CoA carboxylase; propionyl-CoA carboxylase 783565..785172 Burkholderia phytofirmans PsJN 6280421 YP_001888426.1 CDS Bphyt_4688 NC_010676.1 785214 785999 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 785214..785999 Burkholderia phytofirmans PsJN 6279794 YP_001888427.1 CDS Bphyt_4689 NC_010676.1 786081 788159 D PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: bxe:Bxe_B0963 putative biotin carboxylase; carbamoyl-phosphate synthase ATP-binding subunit L 786081..788159 Burkholderia phytofirmans PsJN 6280233 YP_001888428.1 CDS Bphyt_4690 NC_010676.1 788183 788974 R KEGG: bxe:Bxe_B0964 putative ABC phosphate/phosphonate transporter, periplasmic ligand binding protein; ABC phosphate/phosphonate transporter periplasmic ligand binding protein complement(788183..788974) Burkholderia phytofirmans PsJN 6278980 YP_001888429.1 CDS Bphyt_4691 NC_010676.1 789000 789278 R KEGG: bxe:Bxe_B0965 hypothetical protein; hypothetical protein complement(789000..789278) Burkholderia phytofirmans PsJN 6278625 YP_001888430.1 CDS Bphyt_4692 NC_010676.1 789542 789730 D hypothetical protein 789542..789730 Burkholderia phytofirmans PsJN 6279062 YP_001888431.1 CDS Bphyt_4693 NC_010676.1 789734 790348 D PFAM: O-methyltransferase family 3; KEGG: rle:RL2915 putative methyltransferase; O-methyltransferase family protein 789734..790348 Burkholderia phytofirmans PsJN 6279998 YP_001888432.1 CDS Bphyt_4694 NC_010676.1 790401 791012 R PFAM: Uracil-DNA glycosylase superfamily; KEGG: bpd:BURPS668_A2858 uracil-DNA glycosylase; uracil-DNA glycosylase superfamily complement(790401..791012) Burkholderia phytofirmans PsJN 6278620 YP_001888433.1 CDS Bphyt_4695 NC_010676.1 791058 791600 R PFAM: protein of unknown function DUF1130; KEGG: bmu:Bmul_3713 protein of unknown function DUF1130; hypothetical protein complement(791058..791600) Burkholderia phytofirmans PsJN 6278177 YP_001888434.1 CDS Bphyt_4696 NC_010676.1 791746 792558 D KEGG: bcm:Bcenmc03_2365 hypothetical protein; hypothetical protein 791746..792558 Burkholderia phytofirmans PsJN 6280271 YP_001888435.1 CDS Bphyt_4697 NC_010676.1 792641 793042 D KEGG: bam:Bamb_2122 hypothetical protein; hypothetical protein 792641..793042 Burkholderia phytofirmans PsJN 6279075 YP_001888436.1 CDS Bphyt_4698 NC_010676.1 793133 793630 D KEGG: bmu:Bmul_0037 abortive infection protein; hypothetical protein 793133..793630 Burkholderia phytofirmans PsJN 6279432 YP_001888437.1 CDS Bphyt_4699 NC_010676.1 793639 794094 R PFAM: guanine-specific ribonuclease N1 and T1; KEGG: bxe:Bxe_B1532 putative guanyl-specific ribonuclease SA; guanine-specific ribonuclease N1 and T1 complement(793639..794094) Burkholderia phytofirmans PsJN 6278781 YP_001888438.1 CDS Bphyt_4701 NC_010676.1 794689 795390 D TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: reu:Reut_A1720 aspartate racemase; aspartate racemase 794689..795390 Burkholderia phytofirmans PsJN 6279198 YP_001888439.1 CDS Bphyt_4703 NC_010676.1 796107 798350 D KEGG: bte:BTH_I1354 exopolysaccharide tyrosine-protein kinase, putative; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; exopolysaccharide transport protein family protein 796107..798350 Burkholderia phytofirmans PsJN 6279169 YP_001888440.1 CDS Bphyt_4704 NC_010676.1 798443 799720 D TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bpe:BP3150 polysaccharide biosynthesis protein; nucleotide sugar dehydrogenase 798443..799720 Burkholderia phytofirmans PsJN 6279103 YP_001888441.1 CDS Bphyt_4705 NC_010676.1 799798 800829 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: prw:PsycPRwf_0248 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 799798..800829 Burkholderia phytofirmans PsJN 6279521 YP_001888442.1 CDS Bphyt_4706 NC_010676.1 800915 802282 D PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: bam:Bamb_6493 virulence factor MviN family protein; virulence factor MVIN family protein 800915..802282 Burkholderia phytofirmans PsJN 6279307 YP_001888443.1 CDS Bphyt_4707 NC_010676.1 802279 803439 D PFAM: glycosyl transferase group 1; KEGG: bpt:Bpet4027 putative glycosyltransferase; group 1 glycosyl transferase 802279..803439 Burkholderia phytofirmans PsJN 6278888 YP_001888444.1 CDS Bphyt_4708 NC_010676.1 803492 804616 D PFAM: glycosyl transferase group 1; KEGG: bpt:Bpet4025 putative glycosyltransferase; group 1 glycosyl transferase 803492..804616 Burkholderia phytofirmans PsJN 6279001 YP_001888445.1 CDS Bphyt_4709 NC_010676.1 804689 805879 D PFAM: glycosyl transferase group 1; KEGG: sat:SYN_02667 alpha-D-QuiNAc alpha-1,3-galactosyltransferase; group 1 glycosyl transferase 804689..805879 Burkholderia phytofirmans PsJN 6278155 YP_001888446.1 CDS Bphyt_4710 NC_010676.1 805918 806655 D PFAM: polysaccharide deacetylase; KEGG: swi:Swit_2654 hypothetical protein; polysaccharide deacetylase 805918..806655 Burkholderia phytofirmans PsJN 6278878 YP_001888447.1 CDS Bphyt_4711 NC_010676.1 806663 807697 D KEGG: aby:ABAYE2503 hypothetical protein; putative exported protein; hypothetical protein 806663..807697 Burkholderia phytofirmans PsJN 6279697 YP_001888448.1 CDS Bphyt_4712 NC_010676.1 807719 808894 R PFAM: glycosyl transferase group 1; KEGG: pca:Pcar_1523 glycosyltransferase; group 1 glycosyl transferase complement(807719..808894) Burkholderia phytofirmans PsJN 6279735 YP_001888449.1 CDS Bphyt_4713 NC_010676.1 809347 810423 D KEGG: csa:Csal_1717 hypothetical protein; hypothetical protein 809347..810423 Burkholderia phytofirmans PsJN 6279754 YP_001888450.1 CDS Bphyt_4714 NC_010676.1 810736 811872 D PFAM: glycosyl transferase family 4; KEGG: rso:RSc0689 putative undecaprenyl phosphate N-acetylglucosaminyltransferase transmembrane protein; glycosyl transferase 810736..811872 Burkholderia phytofirmans PsJN 6278532 YP_001888451.1 CDS Bphyt_4715 NC_010676.1 812056 812754 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmu:Bmul_1682 GntR domain protein; GntR family transcriptional regulator 812056..812754 Burkholderia phytofirmans PsJN 6278603 YP_001888452.1 CDS Bphyt_4716 NC_010676.1 812932 814749 D TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: bur:Bcep18194_A6331 D-fructose-6-phosphate amidotransferase; glucosamine/fructose-6-phosphate aminotransferase 812932..814749 Burkholderia phytofirmans PsJN 6279051 YP_001888453.1 CDS Bphyt_4717 NC_010676.1 814793 816442 D KEGG: azc:AZC_1508 putative formyl transferase; formyl transferase 814793..816442 Burkholderia phytofirmans PsJN 6279022 YP_001888454.1 CDS Bphyt_4718 NC_010676.1 817313 817480 D hypothetical protein 817313..817480 Burkholderia phytofirmans PsJN 6279960 YP_001888455.1 CDS Bphyt_4719 NC_010676.1 817514 818737 R PFAM: lipolytic protein G-D-S-L family; KEGG: scl:sce5221 hypothetical protein; G-D-S-L family lipolytic protein complement(817514..818737) Burkholderia phytofirmans PsJN 6280010 YP_001888456.1 CDS Bphyt_4720 NC_010676.1 819128 822193 D TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; KEGG: bja:bll4282 probable acetoacetyl-CoA synthetase; acetoacetyl-CoA synthase 819128..822193 Burkholderia phytofirmans PsJN 6279969 YP_001888457.1 CDS Bphyt_4721 NC_010676.1 822282 823772 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: smd:Smed_4245 mannitol dehydrogenase domain; mannitol dehydrogenase domain complement(822282..823772) Burkholderia phytofirmans PsJN 6277710 YP_001888458.1 CDS Bphyt_4722 NC_010676.1 824002 825210 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ecv:APECO1_664 starvation sensing protein RspA; galactonate dehydratase 824002..825210 Burkholderia phytofirmans PsJN 6280033 YP_001888459.1 CDS Bphyt_4723 NC_010676.1 825258 826655 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: msm:MSMEG_2911 integral membrane transport protein; major facilitator superfamily protein 825258..826655 Burkholderia phytofirmans PsJN 6280181 YP_001888460.1 CDS Bphyt_4724 NC_010676.1 826689 827735 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr5278 IdnD L-idonate 5-dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 826689..827735 Burkholderia phytofirmans PsJN 6280244 YP_001888461.1 CDS Bphyt_4725 NC_010676.1 827844 829136 D PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4602 major facilitator superfamily MFS_1; major facilitator superfamily protein 827844..829136 Burkholderia phytofirmans PsJN 6280211 YP_001888462.1 CDS Bphyt_4726 NC_010676.1 829233 830066 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: spe:Spro_3567 transcriptional regulator, GntR family; GntR family transcriptional regulator 829233..830066 Burkholderia phytofirmans PsJN 6280229 YP_001888463.1 CDS Bphyt_4727 NC_010676.1 830198 831106 R KEGG: reh:H16_A1656 Ap4A phosphorylase II; Ap4A phosphorylase II complement(830198..831106) Burkholderia phytofirmans PsJN 6280332 YP_001888464.1 CDS Bphyt_4728 NC_010676.1 831153 832109 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: rle:RL4053 putative AraC family transcriptional regulator; AraC family transcriptional regulator complement(831153..832109) Burkholderia phytofirmans PsJN 6279668 YP_001888465.1 CDS Bphyt_4729 NC_010676.1 832323 833309 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: plu:plu1231 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 832323..833309 Burkholderia phytofirmans PsJN 6278924 YP_001888466.1 CDS Bphyt_4730 NC_010676.1 833399 833953 D PFAM: carbonic anhydrase; KEGG: fal:FRAAL2803 hypothetical protein; carbonic anhydrase 833399..833953 Burkholderia phytofirmans PsJN 6278527 YP_001888467.1 CDS Bphyt_4731 NC_010676.1 834026 835033 R PFAM: Luciferase-like monooxygenase; KEGG: bbr:BB2751 putative monooxygenase; luciferase-like monooxygenase complement(834026..835033) Burkholderia phytofirmans PsJN 6278500 YP_001888468.1 CDS Bphyt_4732 NC_010676.1 835349 835894 D PFAM: protein of unknown function DUF336; KEGG: xau:Xaut_1201 protein of unknown function DUF336; hypothetical protein 835349..835894 Burkholderia phytofirmans PsJN 6278885 YP_001888469.1 CDS Bphyt_4733 NC_010676.1 835922 836344 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: amr:AM1_1232 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(835922..836344) Burkholderia phytofirmans PsJN 6278887 YP_001888470.1 CDS Bphyt_4734 NC_010676.1 836450 836752 D KEGG: bxe:Bxe_B1255 hypothetical protein; hypothetical protein 836450..836752 Burkholderia phytofirmans PsJN 6277690 YP_001888471.1 CDS Bphyt_4735 NC_010676.1 836967 838700 D PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: reh:H16_A1779 thioredoxin reductase; cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase 836967..838700 Burkholderia phytofirmans PsJN 6279641 YP_001888472.1 CDS Bphyt_4736 NC_010676.1 838835 840013 R KEGG: azc:AZC_0723 hypothetical membrane protein; hypothetical protein complement(838835..840013) Burkholderia phytofirmans PsJN 6280195 YP_001888473.1 CDS Bphyt_4737 NC_010676.1 840180 840611 R KEGG: mpt:Mpe_A1728 hypothetical protein; hypothetical protein complement(840180..840611) Burkholderia phytofirmans PsJN 6280528 YP_001888474.1 CDS Bphyt_4738 NC_010676.1 840701 842320 R PFAM: AMP-dependent synthetase and ligase; KEGG: sco:SCO3436 fatty acid CoA ligase; AMP-dependent synthetase and ligase complement(840701..842320) Burkholderia phytofirmans PsJN 6278828 YP_001888475.1 CDS Bphyt_4740 NC_010676.1 842687 843859 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B0768 outer membrane porin, OmpC family; porin complement(842687..843859) Burkholderia phytofirmans PsJN 6279109 YP_001888476.1 CDS Bphyt_4741 NC_010676.1 844433 845500 R KEGG: sma:SAV1774 peroxidase; peroxidase complement(844433..845500) Burkholderia phytofirmans PsJN 6280273 YP_001888477.1 CDS Bphyt_4742 NC_010676.1 845703 846452 R KEGG: bxe:Bxe_B2322 hypothetical protein; hypothetical protein complement(845703..846452) Burkholderia phytofirmans PsJN 6279057 YP_001888478.1 CDS Bphyt_4743 NC_010676.1 846563 846790 D KEGG: bte:BTH_II2138 hypothetical protein; hypothetical protein 846563..846790 Burkholderia phytofirmans PsJN 6280318 YP_001888479.1 CDS Bphyt_4744 NC_010676.1 846867 847700 D SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_C7267 ABC amino acid transporter, periplasmic ligand binding protein; family 3 extracellular solute-binding protein 846867..847700 Burkholderia phytofirmans PsJN 6277730 YP_001888480.1 CDS Bphyt_4745 NC_010676.1 847733 849241 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B2011 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein complement(847733..849241) Burkholderia phytofirmans PsJN 6279119 YP_001888481.1 CDS Bphyt_4746 NC_010676.1 849238 852558 R PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B2010 cation/multidrug efflux pump, AcrB/AcrD/AcrF family, RND superfamily; acriflavin resistance protein complement(849238..852558) Burkholderia phytofirmans PsJN 6279361 YP_001888482.1 CDS Bphyt_4747 NC_010676.1 852555 855680 R PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B2009 cation/multidrug efflux pump, AcrB/AcrD/AcrF family, RND superfamily; acriflavin resistance protein complement(852555..855680) Burkholderia phytofirmans PsJN 6279635 YP_001888483.1 CDS Bphyt_4748 NC_010676.1 855696 856925 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B2008 RND efflux pump, membrane fusion protein, CzcB subfamily; RND family efflux transporter MFP subunit complement(855696..856925) Burkholderia phytofirmans PsJN 6277745 YP_001888484.1 CDS Bphyt_4749 NC_010676.1 857350 857571 D hypothetical protein 857350..857571 Burkholderia phytofirmans PsJN 6279616 YP_001888485.1 CDS Bphyt_4750 NC_010676.1 857605 859440 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_1077 ABC transporter related; ABC transporter-like protein complement(857605..859440) Burkholderia phytofirmans PsJN 6279345 YP_001888486.1 CDS Bphyt_4751 NC_010676.1 859762 860916 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2007 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 859762..860916 Burkholderia phytofirmans PsJN 6279252 YP_001888487.1 CDS Bphyt_4752 NC_010676.1 860945 862441 R KEGG: aba:Acid345_0764 hypothetical protein; hypothetical protein complement(860945..862441) Burkholderia phytofirmans PsJN 6278805 YP_001888488.1 CDS Bphyt_4753 NC_010676.1 862633 863697 D KEGG: bxe:Bxe_C1392 hypothetical protein; hypothetical protein 862633..863697 Burkholderia phytofirmans PsJN 6280112 YP_001888489.1 CDS Bphyt_4754 NC_010676.1 863782 866340 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: bxe:Bxe_B2006 periplasmic sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase complement(863782..866340) Burkholderia phytofirmans PsJN 6278901 YP_001888490.1 CDS Bphyt_4755 NC_010676.1 866359 867585 R KEGG: bxe:Bxe_B2005 hypothetical protein; hypothetical protein complement(866359..867585) Burkholderia phytofirmans PsJN 6279992 YP_001888491.1 CDS Bphyt_4756 NC_010676.1 867981 868166 R hypothetical protein complement(867981..868166) Burkholderia phytofirmans PsJN 6280449 YP_001888492.1 CDS Bphyt_4757 NC_010676.1 868417 868695 D KEGG: bcm:Bcenmc03_0912 hypothetical protein; hypothetical protein 868417..868695 Burkholderia phytofirmans PsJN 6280106 YP_001888493.1 CDS Bphyt_4758 NC_010676.1 868769 869050 D KEGG: aba:Acid345_2472 hypothetical protein; hypothetical protein 868769..869050 Burkholderia phytofirmans PsJN 6279790 YP_001888494.1 CDS Bphyt_4759 NC_010676.1 869096 870091 R PFAM: alpha/beta hydrolase fold; KEGG: mbn:Mboo_0148 alpha/beta hydrolase fold; alpha/beta fold family hydrolase complement(869096..870091) Burkholderia phytofirmans PsJN 6279750 YP_001888495.1 CDS Bphyt_4760 NC_010676.1 870088 870771 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rme:Rmet_5326 two component transcriptional regulator, winged helix family; two component winged helix family transcriptional regulator complement(870088..870771) Burkholderia phytofirmans PsJN 6278193 YP_001888496.1 CDS Bphyt_4761 NC_010676.1 870839 871030 R hypothetical protein complement(870839..871030) Burkholderia phytofirmans PsJN 6278968 YP_001888497.1 CDS Bphyt_4762 NC_010676.1 871081 871224 R hypothetical protein complement(871081..871224) Burkholderia phytofirmans PsJN 6277788 YP_001888498.1 CDS Bphyt_4763 NC_010676.1 871382 871936 R KEGG: bxe:Bxe_B2004 hypothetical protein; hypothetical protein complement(871382..871936) Burkholderia phytofirmans PsJN 6279371 YP_001888499.1 CDS Bphyt_4764 NC_010676.1 872222 872503 D KEGG: mrd:Mrad2831_5138 hypothetical protein; hypothetical protein 872222..872503 Burkholderia phytofirmans PsJN 6280266 YP_001888500.1 CDS Bphyt_4765 NC_010676.1 872681 874687 R PFAM: phosphoesterase PA-phosphatase related; SNARE associated Golgi protein; KEGG: bxe:Bxe_B2003 hypothetical protein; PA-phosphatase-like phosphoesterase complement(872681..874687) Burkholderia phytofirmans PsJN 6279477 YP_001888501.1 CDS Bphyt_4766 NC_010676.1 874774 875472 R PFAM: 17 kDa surface antigen; KEGG: rso:RSc1027 probable transmembrane protein; 17 kDa surface antigen complement(874774..875472) Burkholderia phytofirmans PsJN 6280204 YP_001888502.1 CDS Bphyt_4767 NC_010676.1 875586 876230 R PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: bur:Bcep18194_C7497 metal-dependent phosphohydrolase; metal dependent phosphohydrolase complement(875586..876230) Burkholderia phytofirmans PsJN 6279353 YP_001888503.1 CDS Bphyt_4768 NC_010676.1 876391 876729 D KEGG: bxe:Bxe_B2002 hypothetical protein; hypothetical protein 876391..876729 Burkholderia phytofirmans PsJN 6279337 YP_001888504.1 CDS Bphyt_4769 NC_010676.1 876820 877296 D PFAM: OsmC family protein; KEGG: bxe:Bxe_B2001 hypothetical protein; OsmC family protein 876820..877296 Burkholderia phytofirmans PsJN 6278422 YP_001888505.1 CDS Bphyt_4770 NC_010676.1 877357 879015 R KEGG: bvi:Bcep1808_5347 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein complement(877357..879015) Burkholderia phytofirmans PsJN 6279018 YP_001888506.1 CDS Bphyt_4771 NC_010676.1 879197 879724 D hypothetical protein 879197..879724 Burkholderia phytofirmans PsJN 6279872 YP_001888507.1 CDS Bphyt_4772 NC_010676.1 880190 880423 R KEGG: bxe:Bxe_B2000 hypothetical protein; hypothetical protein complement(880190..880423) Burkholderia phytofirmans PsJN 6279364 YP_001888508.1 CDS Bphyt_4773 NC_010676.1 880488 880955 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_B1999 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(880488..880955) Burkholderia phytofirmans PsJN 6280294 YP_001888509.1 CDS Bphyt_4774 NC_010676.1 881109 881762 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B1998 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA 881109..881762 Burkholderia phytofirmans PsJN 6278412 YP_001888510.1 CDS Bphyt_4775 NC_010676.1 881834 882007 R PFAM: protein of unknown function DUF1289; KEGG: bxe:Bxe_B1997 hypothetical protein; hypothetical protein complement(881834..882007) Burkholderia phytofirmans PsJN 6280113 YP_001888511.1 CDS Bphyt_4776 NC_010676.1 882147 882467 D PFAM: protein of unknown function UPF0060; KEGG: bxe:Bxe_B1996 hypothetical protein; hypothetical protein 882147..882467 Burkholderia phytofirmans PsJN 6278376 YP_001888512.1 CDS Bphyt_4777 NC_010676.1 882564 883073 R KEGG: bxe:Bxe_B1995 hypothetical protein; hypothetical protein complement(882564..883073) Burkholderia phytofirmans PsJN 6280268 YP_001888513.1 CDS Bphyt_4778 NC_010676.1 883376 884935 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Peptidase S53 propeptide; KEGG: bxe:Bxe_B1994 kumamolisin; peptidase S53 propeptide 883376..884935 Burkholderia phytofirmans PsJN 6278952 YP_001888514.1 CDS Bphyt_4779 NC_010676.1 885006 886667 D PFAM: peptidase S10 serine carboxypeptidase; KEGG: bxe:Bxe_B1993 carboxypeptidase; peptidase S10 serine carboxypeptidase 885006..886667 Burkholderia phytofirmans PsJN 6280182 YP_001888515.1 CDS Bphyt_4780 NC_010676.1 886929 887582 D KEGG: bxe:Bxe_B1992 hypothetical protein; hypothetical protein 886929..887582 Burkholderia phytofirmans PsJN 6278716 YP_001888516.1 CDS Bphyt_4781 NC_010676.1 887696 888046 D KEGG: bxe:Bxe_B1991 hypothetical protein; hypothetical protein 887696..888046 Burkholderia phytofirmans PsJN 6278660 YP_001888517.1 CDS Bphyt_4782 NC_010676.1 888326 888484 D hypothetical protein 888326..888484 Burkholderia phytofirmans PsJN 6280245 YP_001888518.1 CDS Bphyt_4783 NC_010676.1 888490 888756 D KEGG: bxe:Bxe_B1990 hypothetical protein; hypothetical protein 888490..888756 Burkholderia phytofirmans PsJN 6277786 YP_001888519.1 CDS nadE NC_010676.1 888848 889708 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(888848..889708) Burkholderia phytofirmans PsJN 6279788 YP_001888520.1 CDS Bphyt_4785 NC_010676.1 889954 891024 D KEGG: bxe:Bxe_B1988 hypothetical protein; hypothetical protein 889954..891024 Burkholderia phytofirmans PsJN 6278564 YP_001888521.1 CDS Bphyt_4786 NC_010676.1 891286 892158 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_B1987 hypothetical protein; hypothetical protein complement(891286..892158) Burkholderia phytofirmans PsJN 6277913 YP_001888522.1 CDS Bphyt_4787 NC_010676.1 892292 893851 R PFAM: ABC-1 domain protein; KEGG: bxe:Bxe_B1986 hypothetical protein; ABC-1 domain-containing protein complement(892292..893851) Burkholderia phytofirmans PsJN 6278793 YP_001888523.1 CDS Bphyt_4788 NC_010676.1 894037 894792 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bxe:Bxe_B1877 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 894037..894792 Burkholderia phytofirmans PsJN 6280198 YP_001888524.1 CDS Bphyt_4789 NC_010676.1 895509 896597 D TIGRFAM: 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B1875 ABC transporter, periplasmic ligand binding protein; 2-aminoethylphosphonate ABC transporter substrate-binding protein 895509..896597 Burkholderia phytofirmans PsJN 6280439 YP_001888525.1 CDS Bphyt_4790 NC_010676.1 896723 897823 D KEGG: bxe:Bxe_B1874 ABC transporter, ATPase subunit; TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; 2-aminoethylphosphonate ABC transporter ATP-binding protein PhnT 896723..897823 Burkholderia phytofirmans PsJN 6278219 YP_001888526.1 CDS Bphyt_4791 NC_010676.1 897801 898757 D TIGRFAM: 2-aminoethylphosphonate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1873 ABC transporter, inner membrane subunit; 2-aminoethylphosphonate ABC transporter permease 897801..898757 Burkholderia phytofirmans PsJN 6277853 YP_001888527.1 CDS Bphyt_4792 NC_010676.1 898747 899610 D TIGRFAM: 2-aminoethylphosphonate ABC transport system, membrane component PhnV; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1872 ABC transporter, inner membrane subunit; 2-aminoethylphosphonate ABC transporter membrane protein PhnV 898747..899610 Burkholderia phytofirmans PsJN 6280483 YP_001888528.1 CDS Bphyt_4793 NC_010676.1 899693 900427 D TIGRFAM: phosphonate utilization associated transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B1871 transcriptional regulator, GntR family; GntR family transcriptional regulator 899693..900427 Burkholderia phytofirmans PsJN 6279898 YP_001888529.1 CDS Bphyt_4794 NC_010676.1 900484 901773 D TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bxe:Bxe_B1870 putative phosphonoacetate hydrolase; phosphonoacetate hydrolase 900484..901773 Burkholderia phytofirmans PsJN 6279422 YP_001888530.1 CDS Bphyt_4795 NC_010676.1 901770 903221 D TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B1869 putative NADP-dependentglyceraldehyde-3-phosphate dehydrogenase; phosphonoacetaldehyde dehydrogenase 901770..903221 Burkholderia phytofirmans PsJN 6279896 YP_001888531.1 CDS Bphyt_4796 NC_010676.1 903226 903786 D KEGG: bxe:Bxe_B1868 hypothetical protein; hypothetical protein 903226..903786 Burkholderia phytofirmans PsJN 6277505 YP_001888532.1 CDS Bphyt_4797 NC_010676.1 909966 910961 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1864 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(909966..910961) Burkholderia phytofirmans PsJN 6278609 YP_001888533.1 CDS Bphyt_4798 NC_010676.1 911164 913332 D PFAM: Fusaric acid resistance protein conserved region; KEGG: bte:BTH_II1647 fusaric acid resistance domain protein; fusaric acid resistance protein 911164..913332 Burkholderia phytofirmans PsJN 6278725 YP_001888534.1 CDS Bphyt_4799 NC_010676.1 913503 913718 D KEGG: bxe:Bxe_B1861 hypothetical protein; hypothetical protein 913503..913718 Burkholderia phytofirmans PsJN 6278788 YP_001888535.1 CDS Bphyt_4800 NC_010676.1 913891 915423 D KEGG: bxe:Bxe_B1860 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase 913891..915423 Burkholderia phytofirmans PsJN 6278795 YP_001888536.1 CDS Bphyt_4801 NC_010676.1 915497 915751 R PFAM: Transglycosylase-associated protein; KEGG: bxe:Bxe_B1859 hypothetical protein; transglycosylase-associated protein complement(915497..915751) Burkholderia phytofirmans PsJN 6278926 YP_001888537.1 CDS Bphyt_4802 NC_010676.1 915913 916620 R PFAM: MgtC/SapB transporter; KEGG: bxe:Bxe_B1858 putative Mg+2 transporter, MgtC/SapB family; MgtC/SapB transporter complement(915913..916620) Burkholderia phytofirmans PsJN 6278991 YP_001888538.1 CDS Bphyt_4803 NC_010676.1 917293 917817 D KEGG: bxe:Bxe_B1856 hypothetical protein; hypothetical protein 917293..917817 Burkholderia phytofirmans PsJN 6279052 YP_001888539.1 CDS Bphyt_4804 NC_010676.1 917858 919021 R PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B1855 Ser/Thr protein phosphatase; metallophosphoesterase complement(917858..919021) Burkholderia phytofirmans PsJN 6279237 YP_001888540.1 CDS Bphyt_4805 NC_010676.1 919409 919738 D KEGG: bxe:Bxe_B1854 hypothetical protein; hypothetical protein 919409..919738 Burkholderia phytofirmans PsJN 6279362 YP_001888541.1 CDS Bphyt_4806 NC_010676.1 919770 920354 R PFAM: nitroreductase; KEGG: bxe:Bxe_B1853 hypothetical protein; hypothetical protein complement(919770..920354) Burkholderia phytofirmans PsJN 6279600 YP_001888542.1 CDS Bphyt_4807 NC_010676.1 920511 921122 D PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B1852 oxidoreductase, 2OG-Fe(II) oxygenase family; 2OG-Fe(II) oxygenase 920511..921122 Burkholderia phytofirmans PsJN 6279451 YP_001888543.1 CDS Bphyt_4808 NC_010676.1 921443 922429 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_6552 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 921443..922429 Burkholderia phytofirmans PsJN 6278415 YP_001888544.1 CDS Bphyt_4809 NC_010676.1 922665 924314 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmu:Bmul_5962 ABC transporter related; ABC transporter-like protein 922665..924314 Burkholderia phytofirmans PsJN 6278393 YP_001888545.1 CDS Bphyt_4810 NC_010676.1 924311 925342 D PFAM: inner-membrane translocator; KEGG: bte:BTH_I2344 ribose ABC transporter permease; monosaccharide-transporting ATPase 924311..925342 Burkholderia phytofirmans PsJN 6279729 YP_001888546.1 CDS Bphyt_4811 NC_010676.1 925339 926436 D membrane component of a putative sugar ABC transporter system; inner membrane ABC transporter permease YjfF 925339..926436 Burkholderia phytofirmans PsJN 6279807 YP_001888547.1 CDS Bphyt_4812 NC_010676.1 926458 927759 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_5283 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(926458..927759) Burkholderia phytofirmans PsJN 6278381 YP_001888548.1 CDS Bphyt_4813 NC_010676.1 927825 928604 R PFAM: protein of unknown function DUF1445; KEGG: bvi:Bcep1808_4029 hypothetical protein; hypothetical protein complement(927825..928604) Burkholderia phytofirmans PsJN 6278360 YP_001888549.1 CDS Bphyt_4814 NC_010676.1 928800 929738 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcm:Bcenmc03_3970 transcriptional regulator, LysR family; LysR family transcriptional regulator 928800..929738 Burkholderia phytofirmans PsJN 6278482 YP_001888550.1 CDS Bphyt_4815 NC_010676.1 929769 930701 R TIGRFAM: malonate decarboxylase, epsilon subunit; PFAM: Acyl transferase; KEGG: bxe:Bxe_B1850 putative acyl transferase; malonate decarboxylase subunit epsilon complement(929769..930701) Burkholderia phytofirmans PsJN 6277885 YP_001888551.1 CDS Bphyt_4816 NC_010676.1 930701 931399 R Catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase complement(930701..931399) Burkholderia phytofirmans PsJN 6278495 YP_001888552.1 CDS Bphyt_4817 NC_010676.1 931399 932217 R TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: bxe:Bxe_B1848 putative malonate decarboxylase gamma subunit; malonate decarboxylase subunit gamma complement(931399..932217) Burkholderia phytofirmans PsJN 6277453 YP_001888553.1 CDS Bphyt_4818 NC_010676.1 932214 933098 R The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta complement(932214..933098) Burkholderia phytofirmans PsJN 6278400 YP_001888554.1 CDS Bphyt_4819 NC_010676.1 933095 933409 R acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta complement(933095..933409) Burkholderia phytofirmans PsJN 6278388 YP_001888555.1 CDS Bphyt_4820 NC_010676.1 933397 934320 R catalyzes the reversible formation of 2'-(5''-triphosphoribosyl)-3'dephospho-CoA from 3-dephospho-CoA; triphosphoribosyl-dephospho-CoA synthase complement(933397..934320) Burkholderia phytofirmans PsJN 6279687 YP_001888556.1 CDS Bphyt_4821 NC_010676.1 934323 936005 R TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: bxe:Bxe_B1844 malonate decarboxylase alpha subunit; malonate decarboxylase subunit alpha complement(934323..936005) Burkholderia phytofirmans PsJN 6279661 YP_001888557.1 CDS Bphyt_4822 NC_010676.1 936014 936787 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B1843 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(936014..936787) Burkholderia phytofirmans PsJN 6279760 YP_001888558.1 CDS Bphyt_4823 NC_010676.1 936965 938263 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1842 major facilitator superfamily (MFS)metabolite/H+ symporter; major facilitator superfamily protein 936965..938263 Burkholderia phytofirmans PsJN 6279780 YP_001888559.1 CDS Bphyt_4824 NC_010676.1 938324 939244 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_B1839 putative 10 TMS drug/metabolite exporter, DME family, DMT super family; hypothetical protein complement(938324..939244) Burkholderia phytofirmans PsJN 6279441 YP_001888560.1 CDS Bphyt_4825 NC_010676.1 939359 940240 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1838 transcriptional regulator, LysR family; LysR family transcriptional regulator 939359..940240 Burkholderia phytofirmans PsJN 6279649 YP_001888561.1 CDS Bphyt_4826 NC_010676.1 940327 941385 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B1837 ABC Fe+3 transporter, ATPase subunit; ABC transporter-like protein complement(940327..941385) Burkholderia phytofirmans PsJN 6279602 YP_001888562.1 CDS Bphyt_4827 NC_010676.1 941414 943018 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1836 ABC Fe+3 transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(941414..943018) Burkholderia phytofirmans PsJN 6278954 YP_001888563.1 CDS Bphyt_4828 NC_010676.1 943018 944061 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B1835 ABC Fe+3 transporter, periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(943018..944061) Burkholderia phytofirmans PsJN 6278949 YP_001888564.1 CDS Bphyt_4829 NC_010676.1 944120 945424 R TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bxe:Bxe_B1834 Tat-translocated enzyme, Dyp-type peroxidase; dyp-type peroxidase family protein complement(944120..945424) Burkholderia phytofirmans PsJN 6279137 YP_001888565.1 CDS Bphyt_4830 NC_010676.1 945462 946724 R KEGG: bxe:Bxe_B1833 hypothetical protein; hypothetical protein complement(945462..946724) Burkholderia phytofirmans PsJN 6279187 YP_001888566.1 CDS Bphyt_4831 NC_010676.1 946724 948247 R PFAM: Carbohydrate-selective porin OprB; KEGG: bxe:Bxe_B1832 carbohydrate-selective porin, OprB family; carbohydrate-selective porin OprB complement(946724..948247) Burkholderia phytofirmans PsJN 6278796 YP_001888567.1 CDS Bphyt_4832 NC_010676.1 948653 949492 D PFAM: N-acetyltransferase; KEGG: bxe:Bxe_B1830 N-hydroxyarylamine O-acetyltransferase; N-hydroxyarylamine O-acetyltransferase 948653..949492 Burkholderia phytofirmans PsJN 6278504 YP_001888568.1 CDS Bphyt_4833 NC_010676.1 949505 950185 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: mlo:mll0909 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 949505..950185 Burkholderia phytofirmans PsJN 6277921 YP_001888569.1 CDS Bphyt_4834 NC_010676.1 950479 951339 D PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B1829 ABC amino acid transporter, periplasmic ligand binding protein; family 3 extracellular solute-binding protein 950479..951339 Burkholderia phytofirmans PsJN 6277374 YP_001888570.1 CDS Bphyt_4835 NC_010676.1 951442 952164 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1828 ABC amino acid transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 951442..952164 Burkholderia phytofirmans PsJN 6277957 YP_001888571.1 CDS Bphyt_4836 NC_010676.1 952179 952931 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1827 ABC amino acid transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 952179..952931 Burkholderia phytofirmans PsJN 6277988 YP_001888572.1 CDS Bphyt_4837 NC_010676.1 952967 953758 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1826 ABC amino acid transporter, ATPase subunit; ABC transporter-like protein 952967..953758 Burkholderia phytofirmans PsJN 6278136 YP_001888573.1 CDS Bphyt_4838 NC_010676.1 953797 955446 D PFAM: phenylalanine/histidine ammonia-lyase; KEGG: bxe:Bxe_B1825 histidine ammonia-lyase; phenylalanine/histidine ammonia-lyase 953797..955446 Burkholderia phytofirmans PsJN 6277963 YP_001888574.1 CDS Bphyt_4839 NC_010676.1 955549 956310 D TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_B1824 transcriptional regulator, GntR family; transcriptional regulator, histidine utilization repressor, GntR family 955549..956310 Burkholderia phytofirmans PsJN 6278346 YP_001888575.1 CDS Bphyt_4840 NC_010676.1 956336 957139 R TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_B1823 transcriptional regulator, histidine utilization repressor, GntR family; transcriptional regulator, histidine utilization repressor, GntR family complement(956336..957139) Burkholderia phytofirmans PsJN 6278179 YP_001888576.1 CDS Bphyt_4841 NC_010676.1 957195 958064 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1822 ABC amino acid transporter, ATPase subunit; ABC transporter-like protein complement(957195..958064) Burkholderia phytofirmans PsJN 6278471 YP_001888577.1 CDS Bphyt_4842 NC_010676.1 958084 958746 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1821 ABC amino acid transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(958084..958746) Burkholderia phytofirmans PsJN 6277355 YP_001888578.1 CDS Bphyt_4843 NC_010676.1 958768 959418 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1820 ABC amino acid transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(958768..959418) Burkholderia phytofirmans PsJN 6278337 YP_001888579.1 CDS Bphyt_4844 NC_010676.1 959507 960334 R PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B1819 ABC amino acid transporter, periplasmic ligand binding protein; family 3 extracellular solute-binding protein complement(959507..960334) Burkholderia phytofirmans PsJN 6278003 YP_001888580.1 CDS Bphyt_4845 NC_010676.1 960641 961630 D PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B1818 putative oxidoreductase; 2OG-Fe(II) oxygenase 960641..961630 Burkholderia phytofirmans PsJN 6280091 YP_001888581.1 CDS Bphyt_4846 NC_010676.1 961627 963039 D PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_B1817 putative oxidoreductase; FAD linked oxidase domain-containing protein 961627..963039 Burkholderia phytofirmans PsJN 6278824 YP_001888582.1 CDS Bphyt_4847 NC_010676.1 963065 966523 R PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1816 hypothetical protein; glucose-methanol-choline oxidoreductase complement(963065..966523) Burkholderia phytofirmans PsJN 6279918 YP_001888583.1 CDS Bphyt_4848 NC_010676.1 966728 967519 R KEGG: bxe:Bxe_B1815 hypothetical protein; hypothetical protein complement(966728..967519) Burkholderia phytofirmans PsJN 6277519 YP_001888584.1 CDS Bphyt_4849 NC_010676.1 967898 969865 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B1814 periplasmic sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 967898..969865 Burkholderia phytofirmans PsJN 6278724 YP_001888585.1 CDS Bphyt_4850 NC_010676.1 970057 970830 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_B1813 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(970057..970830) Burkholderia phytofirmans PsJN 6280302 YP_001888586.1 CDS Bphyt_4851 NC_010676.1 971188 971400 R KEGG: bpd:BURPS668_A0426 hypothetical protein; hypothetical protein complement(971188..971400) Burkholderia phytofirmans PsJN 6277925 YP_001888587.1 CDS Bphyt_4852 NC_010676.1 971375 972379 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bxe:Bxe_B1811 cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(971375..972379) Burkholderia phytofirmans PsJN 6279987 YP_001888588.1 CDS Bphyt_4853 NC_010676.1 972419 973831 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bxe:Bxe_B1810 putative cytochrome oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I complement(972419..973831) Burkholderia phytofirmans PsJN 6277840 YP_001888589.1 CDS Bphyt_4854 NC_010676.1 974598 975419 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B1809 non-heme chloroperoxidase; alpha/beta fold family hydrolase 974598..975419 Burkholderia phytofirmans PsJN 6277544 YP_001888590.1 CDS Bphyt_4855 NC_010676.1 975530 976099 R KEGG: bxe:Bxe_B1808 hypothetical protein; hypothetical protein complement(975530..976099) Burkholderia phytofirmans PsJN 6277375 YP_001888591.1 CDS Bphyt_4856 NC_010676.1 976468 977304 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bxe:Bxe_B1807 hypothetical protein; NAD-dependent epimerase/dehydratase 976468..977304 Burkholderia phytofirmans PsJN 6277526 YP_001888592.1 CDS Bphyt_4857 NC_010676.1 977334 978626 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1806 major facilitator superfamily (MFS) metabolite(phthalate/hexuronate)/H+ symporter; major facilitator superfamily protein 977334..978626 Burkholderia phytofirmans PsJN 6280493 YP_001888593.1 CDS Bphyt_4858 NC_010676.1 978791 980806 R PFAM: glycoside hydrolase family 28; KEGG: rso:RSp0833 polygalacturonase transmembrane protein; glycoside hydrolase complement(978791..980806) Burkholderia phytofirmans PsJN 6278630 YP_001888594.1 CDS Bphyt_4859 NC_010676.1 981048 981941 R KEGG: pnu:Pnuc_0594 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase complement(981048..981941) Burkholderia phytofirmans PsJN 6277463 YP_001888595.1 CDS Bphyt_4860 NC_010676.1 981972 982772 R KEGG: pna:Pnap_1599 2-dehydro-3-deoxyglucarate aldolase; TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase; 2-dehydro-3-deoxyglucarate aldolase complement(981972..982772) Burkholderia phytofirmans PsJN 6279471 YP_001888596.1 CDS Bphyt_4861 NC_010676.1 982995 984578 D PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B1805 putative fatty aldehyde dehydrogenase; aldehyde dehydrogenase 982995..984578 Burkholderia phytofirmans PsJN 6279789 YP_001888597.1 CDS Bphyt_4862 NC_010676.1 984680 985423 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B1804 transcriptional regulator, GntR; GntR family transcriptional regulator complement(984680..985423) Burkholderia phytofirmans PsJN 6279923 YP_001888598.1 CDS Bphyt_4863 NC_010676.1 985625 986977 R TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1803 major facilitator superfamily (MFS) D-galactonate transporter; d-galactonate transporter complement(985625..986977) Burkholderia phytofirmans PsJN 6278528 YP_001888599.1 CDS Bphyt_4864 NC_010676.1 987186 988103 R catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase complement(987186..988103) Burkholderia phytofirmans PsJN 6278582 YP_001888600.1 CDS Bphyt_4865 NC_010676.1 988328 989917 D KEGG: bxe:Bxe_B1801 galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase 988328..989917 Burkholderia phytofirmans PsJN 6278664 YP_001888601.1 CDS Bphyt_4866 NC_010676.1 989969 990811 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bxe:Bxe_B1800 hypothetical protein; NAD-dependent epimerase/dehydratase 989969..990811 Burkholderia phytofirmans PsJN 6278767 YP_001888602.1 CDS Bphyt_4867 NC_010676.1 990808 991737 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_B1799 putative senescence marker protein-30 (SMP-30); SMP-30/gluconolaconase/LRE domain-containing protein 990808..991737 Burkholderia phytofirmans PsJN 6278876 YP_001888603.1 CDS Bphyt_4868 NC_010676.1 992325 993317 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bxe:Bxe_B1798 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 992325..993317 Burkholderia phytofirmans PsJN 6278975 YP_001888604.1 CDS Bphyt_4869 NC_010676.1 993471 993950 D PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bxe:Bxe_B1797 TRAP dicarboxylate transporter, DctQ (4TM)subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 993471..993950 Burkholderia phytofirmans PsJN 6279074 YP_001888605.1 CDS Bphyt_4870 NC_010676.1 993958 995310 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bxe:Bxe_B1796 TRAP C4-dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 993958..995310 Burkholderia phytofirmans PsJN 6279085 YP_001888606.1 CDS Bphyt_4871 NC_010676.1 995409 996608 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1795 outer membrane porin, OmpC family; porin 995409..996608 Burkholderia phytofirmans PsJN 6279485 YP_001888607.1 CDS Bphyt_4872 NC_010676.1 996956 997141 R 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase complement(996956..997141) Burkholderia phytofirmans PsJN 6279658 YP_001888608.1 CDS Bphyt_4873 NC_010676.1 997199 997975 R PFAM: class II aldolase/adducin family protein; KEGG: bcm:Bcenmc03_5620 class II aldolase/adducin family protein; aldolase II superfamily protein complement(997199..997975) Burkholderia phytofirmans PsJN 6279638 YP_001888609.1 CDS Bphyt_4874 NC_010676.1 998067 999011 R PFAM: Urea transporter; KEGG: bxe:Bxe_B1794 UreA transporter; Urea transporter complement(998067..999011) Burkholderia phytofirmans PsJN 6279716 YP_001888610.1 CDS Bphyt_4875 NC_010676.1 999266 999820 D PFAM: protein of unknown function DUF1089; KEGG: bxe:Bxe_B1793 hypothetical protein; hypothetical protein 999266..999820 Burkholderia phytofirmans PsJN 6279851 YP_001888611.1 CDS Bphyt_4876 NC_010676.1 999795 1000760 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B1792 putative hydrolase; alpha/beta fold family hydrolase complement(999795..1000760) Burkholderia phytofirmans PsJN 6277771 YP_001888612.1 CDS Bphyt_4877 NC_010676.1 1000757 1001638 R KEGG: bxe:Bxe_B1791 membrane protein; hypothetical protein complement(1000757..1001638) Burkholderia phytofirmans PsJN 6278428 YP_001888613.1 CDS Bphyt_4878 NC_010676.1 1001721 1002629 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B1790 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1001721..1002629) Burkholderia phytofirmans PsJN 6278029 YP_001888614.1 CDS Bphyt_4879 NC_010676.1 1002703 1004304 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1789 flavin-binding monooxygenase; FAD dependent oxidoreductase complement(1002703..1004304) Burkholderia phytofirmans PsJN 6278368 YP_001888615.1 CDS Bphyt_4880 NC_010676.1 1004428 1005420 R KEGG: bpd:BURPS668_A1350 ABC transporter, substrate-binding protein, aliphatic sulfonates family; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein complement(1004428..1005420) Burkholderia phytofirmans PsJN 6277420 YP_001888616.1 CDS Bphyt_4881 NC_010676.1 1005743 1006609 R PFAM: regulatory protein MerR; KEGG: bxe:Bxe_B1788 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(1005743..1006609) Burkholderia phytofirmans PsJN 6278465 YP_001888617.1 CDS Bphyt_4882 NC_010676.1 1006865 1007458 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B1787 putative phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 complement(1006865..1007458) Burkholderia phytofirmans PsJN 6278199 YP_001888618.1 CDS Bphyt_4883 NC_010676.1 1007657 1007935 R KEGG: bxe:Bxe_B1786 hypothetical protein; hypothetical protein complement(1007657..1007935) Burkholderia phytofirmans PsJN 6278440 YP_001888619.1 CDS Bphyt_4885 NC_010676.1 1008152 1009048 R KEGG: bxe:Bxe_B1784 putative transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(1008152..1009048) Burkholderia phytofirmans PsJN 6277952 YP_001888620.1 CDS Bphyt_4886 NC_010676.1 1009262 1010149 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_B1783 putative drug/metabolite transporter, (DMT) superfamily; hypothetical protein complement(1009262..1010149) Burkholderia phytofirmans PsJN 6277909 YP_001888621.1 CDS Bphyt_4887 NC_010676.1 1010360 1011436 R TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bxe:Bxe_B1781 hypothetical protein; TRAP transporter solute receptor, TAXI family complement(1010360..1011436) Burkholderia phytofirmans PsJN 6278358 YP_001888622.1 CDS Bphyt_4888 NC_010676.1 1011630 1012904 R KEGG: bxe:Bxe_B1780 hypothetical protein; hypothetical protein complement(1011630..1012904) Burkholderia phytofirmans PsJN 6278331 YP_001888623.1 CDS Bphyt_4889 NC_010676.1 1013074 1013220 R hypothetical protein complement(1013074..1013220) Burkholderia phytofirmans PsJN 6277869 YP_001888624.1 CDS Bphyt_4890 NC_010676.1 1013303 1014844 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1779 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter complement(1013303..1014844) Burkholderia phytofirmans PsJN 6277342 YP_001888625.1 CDS Bphyt_4891 NC_010676.1 1014919 1015704 D PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B1778 transcriptional regulator, TetR family; TetR family transcriptional regulator 1014919..1015704 Burkholderia phytofirmans PsJN 6278383 YP_001888626.1 CDS Bphyt_4892 NC_010676.1 1015797 1016516 R PFAM: Dimethylmenaquinone methyltransferase; KEGG: nca:Noca_0038 hypothetical protein; hypothetical protein complement(1015797..1016516) Burkholderia phytofirmans PsJN 6279548 YP_001888627.1 CDS Bphyt_4893 NC_010676.1 1016993 1017505 D PFAM: response regulator receiver; KEGG: bxe:Bxe_B1777 response regulator receiver domain protein(CheY); response regulator receiver protein 1016993..1017505 Burkholderia phytofirmans PsJN 6279684 YP_001888628.1 CDS Bphyt_4894 NC_010676.1 1017654 1018226 R PFAM: ferric-uptake regulator; KEGG: bxe:Bxe_B1776 ferric uptake regulator (FUR) family; Fur family ferric uptake regulator complement(1017654..1018226) Burkholderia phytofirmans PsJN 6279667 YP_001888629.1 CDS Bphyt_4895 NC_010676.1 1018360 1018986 R PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_B1775 glutathione S-transferase; glutathione S-transferase domain complement(1018360..1018986) Burkholderia phytofirmans PsJN 6279739 YP_001888630.1 CDS Bphyt_4896 NC_010676.1 1019200 1020894 D PFAM: NERD domain protein; KEGG: bxe:Bxe_B1774 hypothetical protein; NERD domain-containing protein 1019200..1020894 Burkholderia phytofirmans PsJN 6279704 YP_001888631.1 CDS Bphyt_4897 NC_010676.1 1020911 1021858 R PFAM: phosphoribosyltransferase; KEGG: bxe:Bxe_B1773 hypothetical protein; phosphoribosyltransferase complement(1020911..1021858) Burkholderia phytofirmans PsJN 6279757 YP_001888632.1 CDS Bphyt_4898 NC_010676.1 1022151 1022693 D KEGG: bxe:Bxe_B1772 hypothetical protein; hypothetical protein 1022151..1022693 Burkholderia phytofirmans PsJN 6279787 YP_001888633.1 CDS Bphyt_4899 NC_010676.1 1022693 1024516 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B1771 periplasmic sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 1022693..1024516 Burkholderia phytofirmans PsJN 6279783 YP_001888634.1 CDS Bphyt_4900 NC_010676.1 1024599 1025453 R PFAM: BetR domain protein; KEGG: bxe:Bxe_B1770 response regulator receiver domain protein(CheY); response regulator receiver protein complement(1024599..1025453) Burkholderia phytofirmans PsJN 6279630 YP_001888635.1 CDS Bphyt_4901 NC_010676.1 1025758 1027098 R TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: reh:H16_B1655 uncharacterized protein related to capsule biosynthesis enzymes; HipA N-terminal domain-containing protein complement(1025758..1027098) Burkholderia phytofirmans PsJN 6279615 YP_001888636.1 CDS Bphyt_4902 NC_010676.1 1027101 1027355 R PFAM: helix-turn-helix domain protein; KEGG: bvi:Bcep1808_5111 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(1027101..1027355) Burkholderia phytofirmans PsJN 6279458 YP_001888637.1 CDS Bphyt_4903 NC_010676.1 1027638 1028978 D PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1769 hypothetical protein; FAD dependent oxidoreductase 1027638..1028978 Burkholderia phytofirmans PsJN 6279554 YP_001888638.1 CDS Bphyt_4904 NC_010676.1 1029024 1029656 D KEGG: cmi:CMM_2690 hypothetical protein; hypothetical protein 1029024..1029656 Burkholderia phytofirmans PsJN 6279412 YP_001888639.1 CDS Bphyt_4905 NC_010676.1 1029756 1030007 D KEGG: gox:GOX0576 hypothetical protein; hypothetical protein 1029756..1030007 Burkholderia phytofirmans PsJN 6278811 YP_001888640.1 CDS Bphyt_4906 NC_010676.1 1030272 1031378 D PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: bur:Bcep18194_B1162 TrkA-like protein; TrkA-N domain-containing protein 1030272..1031378 Burkholderia phytofirmans PsJN 6278847 YP_001888641.1 CDS Bphyt_4907 NC_010676.1 1031424 1032359 D PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bxe:Bxe_B1765 ornithine cyclodeaminase/Mu-crystallin family protein; ornithine cyclodeaminase/mu-crystallin 1031424..1032359 Burkholderia phytofirmans PsJN 6278896 YP_001888642.1 CDS Bphyt_4908 NC_010676.1 1032663 1034144 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1032663..1034144 Burkholderia phytofirmans PsJN 6278976 YP_001888643.1 CDS Bphyt_4909 NC_010676.1 1034218 1035000 R TIGRFAM: type IV / VI secretion system protein, DotU family; KEGG: bte:BTH_I2968 OmpA family protein, putative; DotU family type IV / VI secretion system protein complement(1034218..1035000) Burkholderia phytofirmans PsJN 6279045 YP_001888644.1 CDS Bphyt_4910 NC_010676.1 1034997 1036343 R TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bpd:BURPS668_3639 hypothetical protein; type VI secretion protein complement(1034997..1036343) Burkholderia phytofirmans PsJN 6279047 YP_001888645.1 CDS Bphyt_4911 NC_010676.1 1036452 1037084 R TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: bpd:BURPS668_3638 putative lipoprotein; type VI secretion protein complement(1036452..1037084) Burkholderia phytofirmans PsJN 6279140 YP_001888646.1 CDS Bphyt_4912 NC_010676.1 1037439 1038122 D PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bpm:BURPS1710b_3646 putative lipoprotein; hypothetical protein 1037439..1038122 Burkholderia phytofirmans PsJN 6279166 YP_001888647.1 CDS Bphyt_4913 NC_010676.1 1038159 1038707 D TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bte:BTH_I2964 EvpA; type VI secretion protein 1038159..1038707 Burkholderia phytofirmans PsJN 6279191 YP_001888648.1 CDS Bphyt_4914 NC_010676.1 1038722 1040212 D TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bmu:Bmul_2929 type VI secretion protein, EvpB/VC_A0108 family; EvpB family type VI secretion protein 1038722..1040212 Burkholderia phytofirmans PsJN 6279184 YP_001888649.1 CDS Bphyt_4915 NC_010676.1 1040290 1040793 D TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: bte:BTH_I2962 unnamed protein product; similar to Hcp protein; type VI secretion system effector 1040290..1040793 Burkholderia phytofirmans PsJN 6278785 YP_001888650.1 CDS Bphyt_4916 NC_010676.1 1040879 1041358 D TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: bcm:Bcenmc03_0448 type VI secretion system lysozyme-related protein; type VI secretion system lysozyme-like protein 1040879..1041358 Burkholderia phytofirmans PsJN 6278361 YP_001888651.1 CDS Bphyt_4917 NC_010676.1 1041478 1043316 D TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bcm:Bcenmc03_0449 type VI secretion protein, VC_A0110 family; type VI secretion protein 1041478..1043316 Burkholderia phytofirmans PsJN 6278320 YP_001888652.1 CDS Bphyt_4918 NC_010676.1 1043280 1044374 D TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bte:BTH_I2959 protein of unknown function (DUF1305) superfamily; type VI secretion protein 1043280..1044374 Burkholderia phytofirmans PsJN 6277982 YP_001888653.1 CDS Bphyt_4919 NC_010676.1 1044410 1047085 D KEGG: bmu:Bmul_2924 type VI secretion ATPase, ClpV1 family; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family 1044410..1047085 Burkholderia phytofirmans PsJN 6278359 YP_001888654.1 CDS Bphyt_4920 NC_010676.1 1047140 1048249 D TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: bps:BPSL3100 hypothetical protein; type VI secretion-associated protein, ImpA family 1047140..1048249 Burkholderia phytofirmans PsJN 6278114 YP_001888655.1 CDS Bphyt_4921 NC_010676.1 1048325 1049287 R PFAM: OmpA/MotB domain protein; KEGG: bmn:BMA10247_3149 OmpA family protein; OmpA/MotB domain-containing protein complement(1048325..1049287) Burkholderia phytofirmans PsJN 6277878 YP_001888656.1 CDS Bphyt_4922 NC_010676.1 1049292 1050284 R TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; KEGG: bte:BTH_I2955 hypothetical protein; type VI secretion-associated protein complement(1049292..1050284) Burkholderia phytofirmans PsJN 6278363 YP_001888657.1 CDS Bphyt_4923 NC_010676.1 1050281 1054147 R TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bps:BPSL3097 hypothetical protein; type VI secretion protein IcmF complement(1050281..1054147) Burkholderia phytofirmans PsJN 6278378 YP_001888658.1 CDS Bphyt_4924 NC_010676.1 1054407 1055048 R PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bmu:Bmul_2906 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin complement(1054407..1055048) Burkholderia phytofirmans PsJN 6278108 YP_001888659.1 CDS Bphyt_4925 NC_010676.1 1055377 1056312 D KEGG: bpd:BURPS668_3622 hypothetical protein; hypothetical protein 1055377..1056312 Burkholderia phytofirmans PsJN 6277879 YP_001888660.1 CDS Bphyt_4926 NC_010676.1 1056523 1057665 D PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: sus:Acid_1342 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 1056523..1057665 Burkholderia phytofirmans PsJN 6278336 YP_001888661.1 CDS Bphyt_4927 NC_010676.1 1057707 1058663 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1755 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1057707..1058663) Burkholderia phytofirmans PsJN 6278340 YP_001888662.1 CDS Bphyt_4928 NC_010676.1 1059385 1060437 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B1754 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase zinc-binding domain-containing protein complement(1059385..1060437) Burkholderia phytofirmans PsJN 6278313 YP_001888663.1 CDS Bphyt_4929 NC_010676.1 1060756 1061724 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: bxe:Bxe_B1753 transcriptional regulator, AraC family; AraC family transcriptional regulator 1060756..1061724 Burkholderia phytofirmans PsJN 6278204 YP_001888664.1 CDS Bphyt_4930 NC_010676.1 1061750 1062526 R PFAM: oxidoreductase molybdopterin binding; KEGG: bxe:Bxe_B1752 oxidoreductase, molybdopterin-binding protein; molybdopterin binding oxidoreductase complement(1061750..1062526) Burkholderia phytofirmans PsJN 6278405 YP_001888665.1 CDS Bphyt_4931 NC_010676.1 1062523 1063158 R KEGG: bxe:Bxe_B1751 hypothetical protein; hypothetical protein complement(1062523..1063158) Burkholderia phytofirmans PsJN 6277640 YP_001888666.1 CDS Bphyt_4932 NC_010676.1 1063250 1063882 R KEGG: bxe:Bxe_B1750 hypothetical protein; hypothetical protein complement(1063250..1063882) Burkholderia phytofirmans PsJN 6278279 YP_001888667.1 CDS Bphyt_4933 NC_010676.1 1064076 1064747 D TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B1748a hypothetical protein; two component heavy metal response winged helix family transcriptional regulator 1064076..1064747 Burkholderia phytofirmans PsJN 6277894 YP_001888668.1 CDS Bphyt_4934 NC_010676.1 1064744 1066144 D TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B1748 heavy metal sensor signal transduction histidine kinases (STHK); heavy metal sensor signal transduction histidine kinase 1064744..1066144 Burkholderia phytofirmans PsJN 6277714 YP_001888669.1 CDS Bphyt_4935 NC_010676.1 1066141 1066566 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_4639 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1066141..1066566) Burkholderia phytofirmans PsJN 6278276 YP_001888670.1 CDS Bphyt_4936 NC_010676.1 1066621 1066962 R TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: bxe:Bxe_B1747 PhnA protein; alkylphosphonate utilization operon protein PhnA complement(1066621..1066962) Burkholderia phytofirmans PsJN 6278387 YP_001888671.1 CDS Bphyt_4937 NC_010676.1 1067230 1067532 D KEGG: bxe:Bxe_B1746 hypothetical protein; hypothetical protein 1067230..1067532 Burkholderia phytofirmans PsJN 6277971 YP_001888672.1 CDS Bphyt_4938 NC_010676.1 1067651 1069129 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B1745 putative diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(1067651..1069129) Burkholderia phytofirmans PsJN 6277868 YP_001888673.1 CDS Bphyt_4939 NC_010676.1 1069386 1070318 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_B1744 putative 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 1069386..1070318 Burkholderia phytofirmans PsJN 6278452 YP_001888674.1 CDS Bphyt_4940 NC_010676.1 1070688 1073612 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bxe:Bxe_B1743 molybdopterin oxidoreductase; molybdopterin oxidoreductase 1070688..1073612 Burkholderia phytofirmans PsJN 6277965 YP_001888675.1 CDS Bphyt_4941 NC_010676.1 1073640 1074395 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bxe:Bxe_B1742 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 1073640..1074395 Burkholderia phytofirmans PsJN 6278685 YP_001888676.1 CDS Bphyt_4942 NC_010676.1 1074415 1075365 D PFAM: DMSO reductase anchor subunit (DmsC); KEGG: bxe:Bxe_B1741 hypothetical protein; DMSO reductase anchor subunit DmsC 1074415..1075365 Burkholderia phytofirmans PsJN 6279497 YP_001888677.1 CDS Bphyt_4943 NC_010676.1 1075518 1078103 R TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; KEGG: bxe:Bxe_B1704 putative ribonucleotide reductase; ribonucleoside-diphosphate reductase complement(1075518..1078103) Burkholderia phytofirmans PsJN 6278351 YP_001888678.1 CDS Bphyt_4944 NC_010676.1 1078378 1078659 R KEGG: bxe:Bxe_B1703 hypothetical protein; hypothetical protein complement(1078378..1078659) Burkholderia phytofirmans PsJN 6280467 YP_001888679.1 CDS Bphyt_4945 NC_010676.1 1079034 1080116 D PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_B1702 hypothetical protein; hypothetical protein 1079034..1080116 Burkholderia phytofirmans PsJN 6278777 YP_001888680.1 CDS Bphyt_4946 NC_010676.1 1080162 1081049 R PFAM: putative esterase; KEGG: bxe:Bxe_B1701 hypothetical protein; esterase complement(1080162..1081049) Burkholderia phytofirmans PsJN 6279871 YP_001888681.1 CDS Bphyt_4947 NC_010676.1 1081233 1082342 R KEGG: bxe:Bxe_B1700 hypothetical protein; hypothetical protein complement(1081233..1082342) Burkholderia phytofirmans PsJN 6280312 YP_001888682.1 CDS Bphyt_4948 NC_010676.1 1082890 1084050 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1699 outer membrane porin, OmpC family; porin 1082890..1084050 Burkholderia phytofirmans PsJN 6277932 YP_001888683.1 CDS Bphyt_4949 NC_010676.1 1084272 1084601 R KEGG: bxe:Bxe_B1698 hypothetical protein; hypothetical protein complement(1084272..1084601) Burkholderia phytofirmans PsJN 6278446 YP_001888684.1 CDS Bphyt_4950 NC_010676.1 1084824 1085411 R PFAM: NUDIX hydrolase; KEGG: aav:Aave_3332 NUDIX hydrolase; NUDIX hydrolase complement(1084824..1085411) Burkholderia phytofirmans PsJN 6278402 YP_001888685.1 CDS Bphyt_4951 NC_010676.1 1085534 1086289 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bch:Bcen2424_0941 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 1085534..1086289 Burkholderia phytofirmans PsJN 6277890 YP_001888686.1 CDS Bphyt_4952 NC_010676.1 1086773 1089601 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bch:Bcen2424_4420 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; acylaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 1086773..1089601 Burkholderia phytofirmans PsJN 6277884 YP_001888687.1 CDS Bphyt_4953 NC_010676.1 1089598 1090380 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bcm:Bcenmc03_5886 (2Fe-2S)-binding domain protein; (2Fe-2S)-binding domain-containing protein 1089598..1090380 Burkholderia phytofirmans PsJN 6278467 YP_001888688.1 CDS Bphyt_4954 NC_010676.1 1090377 1091639 D PFAM: cytochrome c class I; KEGG: bch:Bcen2424_4418 cytochrome c, class I; gluconate 2-dehydrogenase 1090377..1091639 Burkholderia phytofirmans PsJN 6278909 YP_001888689.1 CDS Bphyt_4955 NC_010676.1 1091791 1092213 R KEGG: sme:SMc04265 hypothetical protein; hypothetical protein complement(1091791..1092213) Burkholderia phytofirmans PsJN 6279947 YP_001888690.1 CDS Bphyt_4956 NC_010676.1 1092807 1093784 D PFAM: Peptidoglycan-binding LysM; Peptidase M23; KEGG: bxe:Bxe_B1694 putative lipoprotein NlpD; peptidase M23 1092807..1093784 Burkholderia phytofirmans PsJN 6280078 YP_001888691.1 CDS Bphyt_4957 NC_010676.1 1093795 1094613 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B1693 putative hydrolase; alpha/beta fold family hydrolase complement(1093795..1094613) Burkholderia phytofirmans PsJN 6278209 YP_001888692.1 CDS Bphyt_4958 NC_010676.1 1095139 1095537 R KEGG: bxe:Bxe_B1692 hypothetical protein; hypothetical protein complement(1095139..1095537) Burkholderia phytofirmans PsJN 6278247 YP_001888693.1 CDS Bphyt_4959 NC_010676.1 1095948 1096403 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_B1691 putative oxidoreductase alpha subunit; (2Fe-2S)-binding domain-containing protein 1095948..1096403 Burkholderia phytofirmans PsJN 6280319 YP_001888694.1 CDS Bphyt_4960 NC_010676.1 1096405 1098657 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B1690 isoquinoline 1-oxidoreductase, beta subunit; acylaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 1096405..1098657 Burkholderia phytofirmans PsJN 6280331 YP_001888695.1 CDS Bphyt_4961 NC_010676.1 1098670 1099950 D PFAM: cytochrome c class I; KEGG: bxe:Bxe_B1689 cytochrome c, class I; gluconate 2-dehydrogenase 1098670..1099950 Burkholderia phytofirmans PsJN 6280385 YP_001888696.1 CDS Bphyt_4962 NC_010676.1 1100029 1100685 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1688 ABC polar amino acid family transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(1100029..1100685) Burkholderia phytofirmans PsJN 6277785 YP_001888697.1 CDS Bphyt_4963 NC_010676.1 1100688 1101434 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1687 ABC polar amino acid family transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(1100688..1101434) Burkholderia phytofirmans PsJN 6279025 YP_001888698.1 CDS Bphyt_4964 NC_010676.1 1101502 1102326 R PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B1686 ABC amino acid transporter, periplasmic ligand binding protein; family 3 extracellular solute-binding protein complement(1101502..1102326) Burkholderia phytofirmans PsJN 6278761 YP_001888699.1 CDS Bphyt_4965 NC_010676.1 1102382 1103455 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B1685 ABC spermidine/putrescine transporter, ATPase subunit; ABC transporter-like protein complement(1102382..1103455) Burkholderia phytofirmans PsJN 6280180 YP_001888700.1 CDS Bphyt_4966 NC_010676.1 1103491 1104378 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1684 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1103491..1104378) Burkholderia phytofirmans PsJN 6279064 YP_001888701.1 CDS Bphyt_4967 NC_010676.1 1104375 1105334 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1683 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1104375..1105334) Burkholderia phytofirmans PsJN 6279988 YP_001888702.1 CDS Bphyt_4968 NC_010676.1 1105331 1106425 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B1682 ABC spermidine/putrescine transporter, periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(1105331..1106425) Burkholderia phytofirmans PsJN 6279876 YP_001888703.1 CDS Bphyt_4969 NC_010676.1 1106955 1107848 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1681 transcriptional regulator, LysR family; LysR family transcriptional regulator 1106955..1107848 Burkholderia phytofirmans PsJN 6280130 YP_001888704.1 CDS Bphyt_4970 NC_010676.1 1107903 1108985 R PFAM: sodium/calcium exchanger membrane region; KEGG: bxe:Bxe_B1680 Ca2+/H+ antiporter, CaCA family; sodium/calcium exchanger membrane protein complement(1107903..1108985) Burkholderia phytofirmans PsJN 6278651 YP_001888705.1 CDS Bphyt_4971 NC_010676.1 1109463 1109810 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bxe:Bxe_B1679 transport-associated; transport-associated protein complement(1109463..1109810) Burkholderia phytofirmans PsJN 6280111 YP_001888706.1 CDS Bphyt_4972 NC_010676.1 1110228 1110869 D TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: bxe:Bxe_B1678 methylpurine-DNA glycosylase (MPG); DNA-3-methyladenine glycosylase 1110228..1110869 Burkholderia phytofirmans PsJN 6279699 YP_001888707.1 CDS Bphyt_4973 NC_010676.1 1111152 1111496 D KEGG: bxe:Bxe_B1677 hypothetical protein; hypothetical protein 1111152..1111496 Burkholderia phytofirmans PsJN 6280524 YP_001888708.1 CDS Bphyt_4974 NC_010676.1 1111881 1112324 R PFAM: CBS domain containing protein; KEGG: bxe:Bxe_B1676 signal-transduction protein containing CBS domains; signal-transduction protein with CBS domains complement(1111881..1112324) Burkholderia phytofirmans PsJN 6277668 YP_001888709.1 CDS Bphyt_4975 NC_010676.1 1112595 1113245 D PFAM: GTP cyclohydrolase II; KEGG: bxe:Bxe_B1675 GTP cyclohydrolase II; GTP cyclohydrolase II 1112595..1113245 Burkholderia phytofirmans PsJN 6280236 YP_001888710.1 CDS Bphyt_4976 NC_010676.1 1113377 1113583 R hypothetical protein complement(1113377..1113583) Burkholderia phytofirmans PsJN 6280415 YP_001888711.1 CDS Bphyt_4977 NC_010676.1 1113598 1114521 R PFAM: NmrA family protein; KEGG: bxe:Bxe_B1674 hypothetical protein; NmrA family protein complement(1113598..1114521) Burkholderia phytofirmans PsJN 6279433 YP_001888712.1 CDS Bphyt_4978 NC_010676.1 1114729 1115685 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1673 putative transcriptional regulator, AraC family; AraC family transcriptional regulator 1114729..1115685 Burkholderia phytofirmans PsJN 6278556 YP_001888713.1 CDS Bphyt_4979 NC_010676.1 1115779 1116606 R KEGG: bxe:Bxe_B1672 predicted transmembrane transcriptional regulator (anti-sigma factor); transmembrane anti-sigma factor complement(1115779..1116606) Burkholderia phytofirmans PsJN 6277695 YP_001888714.1 CDS Bphyt_4980 NC_010676.1 1116603 1117121 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B1671 sigma-24 (FecI); ECF subfamily RNA polymerase sigma-24 subunit complement(1116603..1117121) Burkholderia phytofirmans PsJN 6280217 YP_001888715.1 CDS Bphyt_4981 NC_010676.1 1117270 1117992 R KEGG: bxe:Bxe_B1670 predicted transmembrane transcriptional regulator (anti-sigma factor); transmembrane anti-sigma factor complement(1117270..1117992) Burkholderia phytofirmans PsJN 6277686 YP_001888716.1 CDS Bphyt_4982 NC_010676.1 1118273 1118542 D KEGG: bxe:Bxe_B1669 hypothetical protein; hypothetical protein 1118273..1118542 Burkholderia phytofirmans PsJN 6278889 YP_001888717.1 CDS Bphyt_4983 NC_010676.1 1118654 1119742 D PFAM: Catalase domain protein; KEGG: bxe:Bxe_B1668 putative catalase; Catalase domain-containing protein 1118654..1119742 Burkholderia phytofirmans PsJN 6277680 YP_001888718.1 CDS Bphyt_4984 NC_010676.1 1119739 1120278 D PFAM: cytochrome B561; KEGG: bxe:Bxe_B1667 putative type-b cytochrome; cytochrome B561 1119739..1120278 Burkholderia phytofirmans PsJN 6280255 YP_001888719.1 CDS Bphyt_4985 NC_010676.1 1120286 1122781 R PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: bxe:Bxe_B1666 dehydrogenase; FAD dependent oxidoreductase complement(1120286..1122781) Burkholderia phytofirmans PsJN 6278626 YP_001888720.1 CDS Bphyt_4986 NC_010676.1 1123056 1123838 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bxe:Bxe_B1665 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 1123056..1123838 Burkholderia phytofirmans PsJN 6280143 YP_001888721.1 CDS Bphyt_4987 NC_010676.1 1123963 1127430 D KEGG: bxe:Bxe_B1664 putative helicase; PFAM: SNF2-related protein; helicase domain protein; zinc finger SWIM domain protein; SMART: DEAD-like helicases; Non-specific serine/threonine protein kinase 1123963..1127430 Burkholderia phytofirmans PsJN 6280261 YP_001888722.1 CDS Bphyt_4988 NC_010676.1 1127671 1127919 D KEGG: bch:Bcen2424_2526 hypothetical protein; hypothetical protein 1127671..1127919 Burkholderia phytofirmans PsJN 6279284 YP_001888723.1 CDS Bphyt_4989 NC_010676.1 1127985 1128788 D PFAM: Peptidoglycan-binding LysM; Peptidase M23; KEGG: bxe:Bxe_B1663 putative lipoprotein; peptidase M23 1127985..1128788 Burkholderia phytofirmans PsJN 6280445 YP_001888724.1 CDS Bphyt_4990 NC_010676.1 1128823 1129506 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bxe:Bxe_A4315 rare lipoprotein A; rare lipoprotein A 1128823..1129506 Burkholderia phytofirmans PsJN 6279453 YP_001888725.1 CDS Bphyt_4991 NC_010676.1 1130356 1131093 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B1661 two component transcriptional regulator, winged helix family; two component winged helix family transcriptional regulator 1130356..1131093 Burkholderia phytofirmans PsJN 6278763 YP_001888726.1 CDS Bphyt_4992 NC_010676.1 1131090 1132544 D KEGG: bxe:Bxe_B1660 putative peptidoglycan-binding LysM; peptidoglycan-binding LysM 1131090..1132544 Burkholderia phytofirmans PsJN 6279911 YP_001888727.1 CDS Bphyt_4993 NC_010676.1 1132611 1135100 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE2 domain protein; KEGG: bxe:Bxe_B1659 CHASE sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1132611..1135100 Burkholderia phytofirmans PsJN 6279910 YP_001888728.1 CDS Bphyt_4994 NC_010676.1 1135097 1135741 D KEGG: bxe:Bxe_B1658 putative lipoprotein; lipoprotein 1135097..1135741 Burkholderia phytofirmans PsJN 6280212 YP_001888729.1 CDS Bphyt_4995 NC_010676.1 1135754 1136413 R TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: bxe:Bxe_B1657 putative oxidoreductase; cob(II)yrinic acid a,c-diamide reductase complement(1135754..1136413) Burkholderia phytofirmans PsJN 6279240 YP_001888730.1 CDS Bphyt_4996 NC_010676.1 1136397 1137695 R PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: bxe:Bxe_B1656 CobB; CobB/CobQ domain-containing protein glutamine amidotransferase complement(1136397..1137695) Burkholderia phytofirmans PsJN 6280459 YP_001888731.1 CDS Bphyt_4997 NC_010676.1 1137699 1138301 R catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(1137699..1138301) Burkholderia phytofirmans PsJN 6280185 YP_001888732.1 CDS Bphyt_4998 NC_010676.1 1138298 1138786 R KEGG: cvi:CV_1563 cobalamin biosynthesis protein CbiG; cobalamin biosynthesis protein CbiG complement(1138298..1138786) Burkholderia phytofirmans PsJN 6277765 YP_001888733.1 CDS Bphyt_4999 NC_010676.1 1138783 1139571 R catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase complement(1138783..1139571) Burkholderia phytofirmans PsJN 6278905 YP_001888734.1 CDS Bphyt_5000 NC_010676.1 1140606 1141697 D TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_B1647 CobW; cobalamin biosynthesis protein CobW 1140606..1141697 Burkholderia phytofirmans PsJN 6277813 YP_001888735.1 CDS cobN NC_010676.1 1141704 1145513 D with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 1141704..1145513 Burkholderia phytofirmans PsJN 6278507 YP_001888736.1 CDS Bphyt_5002 NC_010676.1 1145510 1146586 D KEGG: bxe:Bxe_B1645 putative magnesium chelatase, ChlI subunit; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; magnesium chelatase 1145510..1146586 Burkholderia phytofirmans PsJN 6278819 YP_001888737.1 CDS Bphyt_5003 NC_010676.1 1146673 1147269 D KEGG: bxe:Bxe_B1644 hypothetical protein; hypothetical protein 1146673..1147269 Burkholderia phytofirmans PsJN 6280305 YP_001888738.1 CDS Bphyt_5004 NC_010676.1 1147303 1148247 R PFAM: type IV pilus assembly PilZ; KEGG: bxe:Bxe_B1643 hypothetical protein; type IV pilus assembly PilZ complement(1147303..1148247) Burkholderia phytofirmans PsJN 6279941 YP_001888739.1 CDS Bphyt_5005 NC_010676.1 1154383 1155924 R KEGG: bxe:Bxe_B1642 putative AttH; secreted hydrolase-like protein complement(1154383..1155924) Burkholderia phytofirmans PsJN 6280381 YP_001888740.1 CDS Bphyt_5006 NC_010676.1 1155924 1158497 R PFAM: protein of unknown function DUF214; KEGG: bxe:Bxe_B1641 ABC liporpotein exporter, fused inner membrane subunits; hypothetical protein complement(1155924..1158497) Burkholderia phytofirmans PsJN 6278469 YP_001888741.1 CDS Bphyt_5007 NC_010676.1 1158484 1159215 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1640 ABC lipoprotein exporter, ATPase subunit; ABC transporter-like protein complement(1158484..1159215) Burkholderia phytofirmans PsJN 6280102 YP_001888742.1 CDS Bphyt_5008 NC_010676.1 1159913 1161469 D KEGG: bxe:Bxe_B1638 proton-translocating NADH-quinoneoxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 1159913..1161469 Burkholderia phytofirmans PsJN 6279507 YP_001888743.1 CDS Bphyt_5009 NC_010676.1 1161838 1162737 D TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: bxe:Bxe_B1637 cytochrome o ubiquinol oxidase subunit II; ubiquinol oxidase subunit II 1161838..1162737 Burkholderia phytofirmans PsJN 6277689 YP_001888744.1 CDS Bphyt_5010 NC_010676.1 1162741 1164729 D KEGG: bxe:Bxe_B1636 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 1162741..1164729 Burkholderia phytofirmans PsJN 6280454 YP_001888745.1 CDS Bphyt_5011 NC_010676.1 1164729 1165334 D TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: bxe:Bxe_B1635 CyoC; cytochrome o ubiquinol oxidase subunit III 1164729..1165334 Burkholderia phytofirmans PsJN 6280202 YP_001888746.1 CDS Bphyt_5012 NC_010676.1 1165335 1165667 D TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: bxe:Bxe_B1634 CyoD; cytochrome o ubiquinol oxidase subunit IV 1165335..1165667 Burkholderia phytofirmans PsJN 6280353 YP_001888747.1 CDS Bphyt_5013 NC_010676.1 1165995 1167383 D KEGG: bur:Bcep18194_B0590 cysteine--tRNA ligase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; cysteinyl-tRNA synthetase 1165995..1167383 Burkholderia phytofirmans PsJN 6280025 YP_001888748.1 CDS Bphyt_5014 NC_010676.1 1167481 1167729 R KEGG: bxe:Bxe_B1633 hypothetical protein; hypothetical protein complement(1167481..1167729) Burkholderia phytofirmans PsJN 6279004 YP_001888749.1 CDS Bphyt_5015 NC_010676.1 1168051 1168443 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B1632 alkylhydroperoxidase AhpD core; AhpD family alkylhydroperoxidase like protein 1168051..1168443 Burkholderia phytofirmans PsJN 6279096 YP_001888750.1 CDS Bphyt_5016 NC_010676.1 1168540 1169232 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B1631 HAD-superfamily hydrolase, subfamily IA, variant3; HAD-superfamily hydrolase complement(1168540..1169232) Burkholderia phytofirmans PsJN 6279877 YP_001888751.1 CDS Bphyt_5017 NC_010676.1 1169344 1170786 R PFAM: Di-haem cytochrome c peroxidase; KEGG: bte:BTH_II1637 di-haem cytochrome c peroxidase family protein; Di-heme cytochrome c peroxidase complement(1169344..1170786) Burkholderia phytofirmans PsJN 6278837 YP_001888752.1 CDS Bphyt_5018 NC_010676.1 1170988 1172754 R PFAM: phosphoesterase; KEGG: bcm:Bcenmc03_6008 phospholipase C; phosphoesterase complement(1170988..1172754) Burkholderia phytofirmans PsJN 6279459 YP_001888753.1 CDS Bphyt_5019 NC_010676.1 1173155 1173475 D KEGG: bxe:Bxe_B1630 putative lipoprotein; lipoprotein 1173155..1173475 Burkholderia phytofirmans PsJN 6279813 YP_001888754.1 CDS Bphyt_5020 NC_010676.1 1173540 1173641 D KEGG: bpm:BURPS1710b_3063 hypothetical protein; hypothetical protein 1173540..1173641 Burkholderia phytofirmans PsJN 6277679 YP_001888755.1 CDS Bphyt_5021 NC_010676.1 1173835 1174395 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B1629 sigma-24 (FecI); ECF subfamily RNA polymerase sigma-24 subunit 1173835..1174395 Burkholderia phytofirmans PsJN 6280022 YP_001888756.1 CDS Bphyt_5022 NC_010676.1 1174392 1174820 D KEGG: bxe:Bxe_B1628 hypothetical protein; hypothetical protein 1174392..1174820 Burkholderia phytofirmans PsJN 6280035 YP_001888757.1 CDS Bphyt_5023 NC_010676.1 1174817 1175335 D KEGG: bxe:Bxe_B1627 putative membrane-associated protein; membrane-associated protein 1174817..1175335 Burkholderia phytofirmans PsJN 6277676 YP_001888758.1 CDS Bphyt_5024 NC_010676.1 1175409 1176968 D PFAM: Protein of unknown function DUF1800; KEGG: bxe:Bxe_B1626 hypothetical protein; hypothetical protein 1175409..1176968 Burkholderia phytofirmans PsJN 6279374 YP_001888759.1 CDS Bphyt_5025 NC_010676.1 1176974 1178122 D PFAM: protein of unknown function DUF1501; KEGG: bxe:Bxe_B1625 hypothetical protein; hypothetical protein 1176974..1178122 Burkholderia phytofirmans PsJN 6279771 YP_001888760.1 CDS Bphyt_5026 NC_010676.1 1178355 1178570 D KEGG: bam:Bamb_3910 hypothetical protein; hypothetical protein 1178355..1178570 Burkholderia phytofirmans PsJN 6277597 YP_001888761.1 CDS Bphyt_5027 NC_010676.1 1178594 1179838 R PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_3349 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1178594..1179838) Burkholderia phytofirmans PsJN 6279470 YP_001888762.1 CDS Bphyt_5028 NC_010676.1 1179877 1180422 R PFAM: flavin reductase domain protein FMN-binding; KEGG: rpb:RPB_3898 flavin reductase-like, FMN-binding; flavin reductase domain-containing protein complement(1179877..1180422) Burkholderia phytofirmans PsJN 6279666 YP_001888763.1 CDS Bphyt_5029 NC_010676.1 1180617 1182008 R KEGG: bvi:Bcep1808_3569 flavin-dependent oxidoreductase; flavin-dependent oxidoreductase complement(1180617..1182008) Burkholderia phytofirmans PsJN 6278999 YP_001888764.1 CDS Bphyt_5030 NC_010676.1 1182248 1182817 D PFAM: helix-turn-helix domain protein; KEGG: reu:Reut_B5130 helix-turn-helix motif; XRE family transcriptional regulator 1182248..1182817 Burkholderia phytofirmans PsJN 6278087 YP_001888765.1 CDS Bphyt_5031 NC_010676.1 1182956 1183315 R PFAM: transport-associated; KEGG: bxe:Bxe_B1624 putative phospholipid-binding protein; transport-associated protein complement(1182956..1183315) Burkholderia phytofirmans PsJN 6279215 YP_001888766.1 CDS Bphyt_5032 NC_010676.1 1183621 1185426 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: psp:PSPPH_0495 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein complement(1183621..1185426) Burkholderia phytofirmans PsJN 6277943 YP_001888767.1 CDS Bphyt_5033 NC_010676.1 1185696 1186469 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dac:Daci_0266 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1185696..1186469 Burkholderia phytofirmans PsJN 6278103 YP_001888768.1 CDS Bphyt_5034 NC_010676.1 1186556 1188253 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1186556..1188253 Burkholderia phytofirmans PsJN 6279036 YP_001888769.1 CDS Bphyt_5035 NC_010676.1 1188424 1188741 D KEGG: bxe:Bxe_B1622 hypothetical protein; hypothetical protein 1188424..1188741 Burkholderia phytofirmans PsJN 6278216 YP_001888770.1 CDS Bphyt_5036 NC_010676.1 1188875 1189786 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1621 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1188875..1189786) Burkholderia phytofirmans PsJN 6279189 YP_001888771.1 CDS Bphyt_5037 NC_010676.1 1189900 1191030 D KEGG: bxe:Bxe_B1620 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 1189900..1191030 Burkholderia phytofirmans PsJN 6277682 YP_001888772.1 CDS Bphyt_5038 NC_010676.1 1191132 1192427 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1619 major facilitator superfamily (MFS) tartrate/H+ symporter; major facilitator superfamily protein 1191132..1192427 Burkholderia phytofirmans PsJN 6279999 YP_001888773.1 CDS Bphyt_5039 NC_010676.1 1192558 1193688 D PFAM: protein of unknown function DUF125 transmembrane; KEGG: bxe:Bxe_B1618 hypothetical protein; hypothetical protein 1192558..1193688 Burkholderia phytofirmans PsJN 6280032 YP_001888774.1 CDS Bphyt_5040 NC_010676.1 1194200 1195378 D KEGG: bxe:Bxe_B1616 ABC proline/glycine betaine transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase 1194200..1195378 Burkholderia phytofirmans PsJN 6278961 YP_001888775.1 CDS Bphyt_5041 NC_010676.1 1195371 1196273 D TIGRFAM: choline ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1615 ABC proline/glycine betaine transporter, inner membrane subunit; choline ABC transporter permease 1195371..1196273 Burkholderia phytofirmans PsJN 6279989 YP_001888776.1 CDS Bphyt_5042 NC_010676.1 1196281 1197279 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1614 transcriptional regulator, AraC family; AraC family transcriptional regulator 1196281..1197279 Burkholderia phytofirmans PsJN 6279966 YP_001888777.1 CDS Bphyt_5043 NC_010676.1 1197368 1198303 D TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bxe:Bxe_B1613 ABC proline/glycine betaine transporter, periplasmic ligand binding protein; choline ABC transporter periplasmic binding protein 1197368..1198303 Burkholderia phytofirmans PsJN 6278893 YP_001888778.1 CDS Bphyt_5044 NC_010676.1 1198623 1201085 D TIGRFAM: YD repeat protein; KEGG: bxe:Bxe_B2598 YD repeat protein; YD repeat-containing protein 1198623..1201085 Burkholderia phytofirmans PsJN 6279770 YP_001888779.1 CDS Bphyt_5045 NC_010676.1 1201082 1201603 D KEGG: bxe:Bxe_B1611 hypothetical protein; hypothetical protein 1201082..1201603 Burkholderia phytofirmans PsJN 6279773 YP_001888780.1 CDS Bphyt_5046 NC_010676.1 1202184 1203266 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1602 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1202184..1203266) Burkholderia phytofirmans PsJN 6280058 YP_001888781.1 CDS Bphyt_5047 NC_010676.1 1203567 1204961 D KEGG: bxe:Bxe_B1601 iron-sulfur-dependent L-serine dehydratase single chain form; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 1203567..1204961 Burkholderia phytofirmans PsJN 6279494 YP_001888782.1 CDS Bphyt_5048 NC_010676.1 1205073 1206317 D TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1600 sarcosine oxidase, beta subunit, heterotetrameric; sarcosine oxidase subunit beta 1205073..1206317 Burkholderia phytofirmans PsJN 6280061 YP_001888783.1 CDS Bphyt_5049 NC_010676.1 1206346 1206684 D PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: bxe:Bxe_B1599 SoxD; sarcosine oxidase subunit delta 1206346..1206684 Burkholderia phytofirmans PsJN 6279589 YP_001888784.1 CDS Bphyt_5050 NC_010676.1 1206681 1209683 D TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bxe:Bxe_B1598 sarcosine oxidase, alpha subunit, heterotetrameric; sarcosine oxidase subunit alpha 1206681..1209683 Burkholderia phytofirmans PsJN 6280045 YP_001888785.1 CDS Bphyt_5051 NC_010676.1 1209673 1210329 D PFAM: Sarcosine oxidase gamma subunit; KEGG: bxe:Bxe_B1597 sarcosine oxidase, gamma subunit; sarcosine oxidase subunit gamma 1209673..1210329 Burkholderia phytofirmans PsJN 6279718 YP_001888786.1 CDS Bphyt_5052 NC_010676.1 1210387 1210650 D KEGG: bxe:Bxe_B1596 hypothetical protein; hypothetical protein 1210387..1210650 Burkholderia phytofirmans PsJN 6280548 YP_001888787.1 CDS Bphyt_5053 NC_010676.1 1210793 1212211 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1595 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein 1210793..1212211 Burkholderia phytofirmans PsJN 6278147 YP_001888788.1 CDS Bphyt_5054 NC_010676.1 1212215 1212658 R KEGG: bxe:Bxe_B1594 hypothetical protein; hypothetical protein complement(1212215..1212658) Burkholderia phytofirmans PsJN 6279185 YP_001888789.1 CDS Bphyt_5055 NC_010676.1 1212655 1213164 R KEGG: bps:BPSL2568 hypothetical protein; hypothetical protein complement(1212655..1213164) Burkholderia phytofirmans PsJN 6279986 YP_001888790.1 CDS Bphyt_5056 NC_010676.1 1213285 1213686 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: rpe:RPE_1634 cupin 2, conserved barrel domain protein; cupin complement(1213285..1213686) Burkholderia phytofirmans PsJN 6280076 YP_001888791.1 CDS ampC NC_010676.1 1213704 1214870 R PFAM: beta-lactamase; KEGG: bxe:Bxe_B1593 beta-lactamase; beta-lactamase complement(1213704..1214870) Burkholderia phytofirmans PsJN 6278864 YP_001888792.1 CDS Bphyt_5058 NC_010676.1 1215025 1216710 R catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase complement(1215025..1216710) Burkholderia phytofirmans PsJN 6280429 YP_001888793.1 CDS Bphyt_5059 NC_010676.1 1216722 1218191 R catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase complement(1216722..1218191) Burkholderia phytofirmans PsJN 6277848 YP_001888794.1 CDS Bphyt_5060 NC_010676.1 1218234 1218821 R HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI complement(1218234..1218821) Burkholderia phytofirmans PsJN 6277835 YP_001888795.1 CDS Bphyt_5061 NC_010676.1 1219105 1220304 D TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B1589 glutathione-independent formaldehyde dehydrogenase; formaldehyde dehydrogenase 1219105..1220304 Burkholderia phytofirmans PsJN 6278048 YP_001888796.1 CDS Bphyt_5062 NC_010676.1 1220438 1221433 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1586 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1220438..1221433) Burkholderia phytofirmans PsJN 6280016 YP_001888797.1 CDS Bphyt_5063 NC_010676.1 1221876 1223150 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1221876..1223150 Burkholderia phytofirmans PsJN 6279533 YP_001888798.1 CDS Bphyt_5064 NC_010676.1 1223169 1224140 D PFAM: peptidase M19 renal dipeptidase; KEGG: bxe:Bxe_B1584 membrane dipeptidase; membrane dipeptidase 1223169..1224140 Burkholderia phytofirmans PsJN 6279854 YP_001888799.1 CDS Bphyt_5065 NC_010676.1 1224194 1224730 D PFAM: 4-vinyl reductase 4VR; KEGG: bxe:Bxe_B1583 hypothetical protein; 4-vinyl reductase 4VR 1224194..1224730 Burkholderia phytofirmans PsJN 6279906 YP_001888800.1 CDS Bphyt_5066 NC_010676.1 1224780 1226843 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B1582 NADH-flavin oxidoreductase / NADH oxidase family protein; NADH:flavin oxidoreductase 1224780..1226843 Burkholderia phytofirmans PsJN 6277445 YP_001888801.1 CDS Bphyt_5067 NC_010676.1 1226846 1228759 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_B1581 hypothetical protein; hypothetical protein 1226846..1228759 Burkholderia phytofirmans PsJN 6280065 YP_001888802.1 CDS Bphyt_5068 NC_010676.1 1228764 1229945 D PFAM: Electron transfer flavoprotein alpha subunit; KEGG: bxe:Bxe_B1580 putative electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha 1228764..1229945 Burkholderia phytofirmans PsJN 6277511 YP_001888803.1 CDS Bphyt_5069 NC_010676.1 1229942 1230718 D KEGG: bxe:Bxe_B1579 putative electron transfer flavoprotein beta-subunit; electron transfer flavoprotein beta-subunit 1229942..1230718 Burkholderia phytofirmans PsJN 6277836 YP_001888804.1 CDS Bphyt_5070 NC_010676.1 1230792 1232105 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B1578 iron-sulphur Rieske protein; Rieske (2Fe-2S) domain-containing protein 1230792..1232105 Burkholderia phytofirmans PsJN 6277871 YP_001888805.1 CDS Bphyt_5071 NC_010676.1 1232142 1233386 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bxe:Bxe_B1577 putative ferredoxin oxidoreductase protein; oxidoreductase FAD-binding domain-containing protein 1232142..1233386 Burkholderia phytofirmans PsJN 6280390 YP_001888806.1 CDS Bphyt_5072 NC_010676.1 1233523 1234380 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bxe:Bxe_B1576 ABC proline/glycine betaine transporter, periplasmic ligand binding protein; glycine betaine ABC transporter substrate-binding protein 1233523..1234380 Burkholderia phytofirmans PsJN 6278655 YP_001888807.1 CDS Bphyt_5073 NC_010676.1 1234477 1235352 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(1234477..1235352) Burkholderia phytofirmans PsJN 6278692 YP_001888808.1 CDS Bphyt_5074 NC_010676.1 1235491 1236405 R TIGRFAM: choline sulfate-utilization transcription factor; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1574 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1235491..1236405) Burkholderia phytofirmans PsJN 6279290 YP_001888809.1 CDS Bphyt_5075 NC_010676.1 1236569 1238107 D TIGRFAM: choline-sulfatase; PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bxe:Bxe_B1573 putative choline-sulfatase; choline-sulfatase 1236569..1238107 Burkholderia phytofirmans PsJN 6279038 YP_001888810.1 CDS Bphyt_5076 NC_010676.1 1238159 1239109 D TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bxe:Bxe_B1572 ABC proline/glycine betaine transporter, periplasmic ligand binding protein; choline ABC transporter periplasmic binding protein 1238159..1239109 Burkholderia phytofirmans PsJN 6278061 YP_001888811.1 CDS Bphyt_5077 NC_010676.1 1239379 1240527 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1571 outer membrane porin, OmpC family; porin 1239379..1240527 Burkholderia phytofirmans PsJN 6277575 YP_001888812.1 CDS Bphyt_5078 NC_010676.1 1240585 1241505 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II0406 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1240585..1241505) Burkholderia phytofirmans PsJN 6279818 YP_001888813.1 CDS Bphyt_5079 NC_010676.1 1241616 1242257 D PFAM: Glutathione S-transferase domain; KEGG: bmu:Bmul_5040 glutathione S-transferase domain; glutathione S-transferase domain 1241616..1242257 Burkholderia phytofirmans PsJN 6279200 YP_001888814.1 CDS Bphyt_5080 NC_010676.1 1242291 1244339 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; FAD-binding 9 siderophore-interacting domain protein; KEGG: bch:Bcen2424_3671 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like protein 1242291..1244339 Burkholderia phytofirmans PsJN 6280099 YP_001888815.1 CDS Bphyt_5081 NC_010676.1 1244509 1245864 R PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: bja:bll3418 epoxide hydrolase 1; epoxide hydrolase domain-containing protein complement(1244509..1245864) Burkholderia phytofirmans PsJN 6280388 YP_001888816.1 CDS Bphyt_5083 NC_010676.1 1246571 1247455 D PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: mab:MAB_1138c putative transcriptional regulator, MarR family; MarR family transcriptional regulator with acetyltransferase activity 1246571..1247455 Burkholderia phytofirmans PsJN 6279498 YP_001888817.1 CDS Bphyt_5084 NC_010676.1 1247811 1249322 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bur:Bcep18194_B2397 diguanylate cyclase (GGDEF domain); diguanylate cyclase 1247811..1249322 Burkholderia phytofirmans PsJN 6280166 YP_001888818.1 CDS Bphyt_5085 NC_010676.1 1249567 1250643 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mms:mma_3082 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1249567..1250643) Burkholderia phytofirmans PsJN 6280144 YP_001888819.1 CDS Bphyt_5086 NC_010676.1 1250684 1251451 R KEGG: bxe:Bxe_B2600 hypothetical protein; hypothetical protein complement(1250684..1251451) Burkholderia phytofirmans PsJN 6279499 YP_001888820.1 CDS Bphyt_5087 NC_010676.1 1251466 1251675 R KEGG: bxe:Bxe_B2601 hypothetical protein; hypothetical protein complement(1251466..1251675) Burkholderia phytofirmans PsJN 6279394 YP_001888821.1 CDS Bphyt_5088 NC_010676.1 1251733 1252113 R KEGG: syp:SYNPCC7002_D0006 nitrile hydratase activator; nitrile hydratase activator complement(1251733..1252113) Burkholderia phytofirmans PsJN 6278787 YP_001888822.1 CDS Bphyt_5089 NC_010676.1 1252126 1252749 R TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; KEGG: rle:pRL110124 putative cobalt-containing nitrile hydratase subunit alpha; nitrile hydratase subunit alpha complement(1252126..1252749) Burkholderia phytofirmans PsJN 6278548 YP_001888823.1 CDS Bphyt_5090 NC_010676.1 1252793 1253536 R PFAM: nitrile hydratase beta subunit; KEGG: syp:SYNPCC7002_D0008 nitrile hydratase beta subunit; nitrile hydratase subunit beta complement(1252793..1253536) Burkholderia phytofirmans PsJN 6278093 YP_001888824.1 CDS Bphyt_5091 NC_010676.1 1253567 1254070 R KEGG: syp:SYNPCC7002_D0009 hypothetical protein; hypothetical protein complement(1253567..1254070) Burkholderia phytofirmans PsJN 6277980 YP_001888825.1 CDS Bphyt_5092 NC_010676.1 1254139 1255122 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: amr:AM1_1196 cobalamin synthesis protein/P47K; cobalamin synthesis protein P47K complement(1254139..1255122) Burkholderia phytofirmans PsJN 6278117 YP_001888826.1 CDS Bphyt_5093 NC_010676.1 1255546 1257096 R PFAM: alpha/beta hydrolase fold; transcriptional activator domain; KEGG: bra:BRADO0715 conserved hypothetical protein; putative DNA-binding transcriptional activator of the SARP family at N-terminal; putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) at C-terminal; SARP family transcriptional regulator complement(1255546..1257096) Burkholderia phytofirmans PsJN 6277898 YP_001888827.1 CDS Bphyt_5094 NC_010676.1 1257215 1258597 D KEGG: mva:Mvan_5929 hypothetical protein; hypothetical protein 1257215..1258597 Burkholderia phytofirmans PsJN 6278133 YP_001888828.1 CDS Bphyt_5095 NC_010676.1 1258882 1259196 D KEGG: rha:RHA1_ro04016 hypothetical protein; hypothetical protein 1258882..1259196 Burkholderia phytofirmans PsJN 6279397 YP_001888829.1 CDS Bphyt_5096 NC_010676.1 1259321 1260448 R PFAM: protein of unknown function DUF323; KEGG: bbr:BB2727 hypothetical protein; hypothetical protein complement(1259321..1260448) Burkholderia phytofirmans PsJN 6278539 YP_001888830.1 CDS Bphyt_5097 NC_010676.1 1260505 1262157 R PFAM: sulfatase; KEGG: ses:SARI_00412 hypothetical protein; sulfatase complement(1260505..1262157) Burkholderia phytofirmans PsJN 6278286 YP_001888831.1 CDS Bphyt_5098 NC_010676.1 1262532 1264232 D PFAM: AMP-dependent synthetase and ligase; KEGG: maq:Maqu_2888 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1262532..1264232 Burkholderia phytofirmans PsJN 6280432 YP_001888832.1 CDS Bphyt_5099 NC_010676.1 1264324 1267026 R PFAM: regulatory protein LuxR; KEGG: reh:H16_A0864 transcriptional regulator, LuxR-family; LuxR family ATP-dependent transcriptional regulator complement(1264324..1267026) Burkholderia phytofirmans PsJN 6278078 YP_001888833.1 CDS Bphyt_5100 NC_010676.1 1267211 1267981 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_B4560 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1267211..1267981 Burkholderia phytofirmans PsJN 6278573 YP_001888834.1 CDS Bphyt_5101 NC_010676.1 1268009 1269250 D PFAM: Thiolase; KEGG: bpt:Bpet1121 putative thiolase; thiolase 1268009..1269250 Burkholderia phytofirmans PsJN 6279034 YP_001888835.1 CDS Bphyt_5102 NC_010676.1 1269277 1270419 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: psa:PST_0606 probable acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1269277..1270419 Burkholderia phytofirmans PsJN 6278679 YP_001888836.1 CDS Bphyt_5103 NC_010676.1 1270770 1271951 D PFAM: Thiolase; KEGG: rpb:RPB_4078 lipid-transfer protein; lipid-transfer protein 1270770..1271951 Burkholderia phytofirmans PsJN 6278218 YP_001888837.1 CDS Bphyt_5104 NC_010676.1 1271965 1273164 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rme:Rmet_3727 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 1271965..1273164 Burkholderia phytofirmans PsJN 6279348 YP_001888838.1 CDS Bphyt_5105 NC_010676.1 1273180 1274334 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reu:Reut_B3836 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region; acyl-CoA dehydrogenase domain-containing protein 1273180..1274334 Burkholderia phytofirmans PsJN 6279460 YP_001888839.1 CDS Bphyt_5106 NC_010676.1 1274331 1274786 D PFAM: MaoC domain protein dehydratase; KEGG: reu:Reut_B3837 MaoC-like dehydratase; MaoC domain-containing protein dehydratase 1274331..1274786 Burkholderia phytofirmans PsJN 6279493 YP_001888840.1 CDS Bphyt_5107 NC_010676.1 1274823 1275725 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpd:RPD_2250 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1274823..1275725 Burkholderia phytofirmans PsJN 6278220 YP_001888841.1 CDS Bphyt_5108 NC_010676.1 1275903 1277048 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bpt:Bpet1116 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(1275903..1277048) Burkholderia phytofirmans PsJN 6279340 YP_001888842.1 CDS Bphyt_5109 NC_010676.1 1277045 1278196 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bmn:BMA10247_2731 alpha-methylacyl-CoA racemase; L-carnitine dehydratase/bile acid-inducible protein F complement(1277045..1278196) Burkholderia phytofirmans PsJN 6279106 YP_001888843.1 CDS Bphyt_5110 NC_010676.1 1278555 1279670 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B2720 outer membrane porin, OmpC family; porin 1278555..1279670 Burkholderia phytofirmans PsJN 6278689 YP_001888844.1 CDS Bphyt_5111 NC_010676.1 1279747 1280493 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpt:Bpet1123 3-hydroxyacyl-CoA dehydrogenase; short-chain dehydrogenase/reductase SDR 1279747..1280493 Burkholderia phytofirmans PsJN 6279127 YP_001888845.1 CDS Bphyt_5112 NC_010676.1 1280648 1280821 R KEGG: sus:Acid_7608 integrase, catalytic region; hypothetical protein complement(1280648..1280821) Burkholderia phytofirmans PsJN 6278292 YP_001888846.1 CDS Bphyt_5113 NC_010676.1 1280859 1281434 R catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein complement(1280859..1281434) Burkholderia phytofirmans PsJN 6278764 YP_001888847.1 CDS Bphyt_5114 NC_010676.1 1281453 1282562 R TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_6311 alcohol dehydrogenase GroES domain protein; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase complement(1281453..1282562) Burkholderia phytofirmans PsJN 6279281 YP_001888848.1 CDS Bphyt_5115 NC_010676.1 1283677 1283910 D KEGG: bxe:Bxe_A3098 hypothetical protein; hypothetical protein 1283677..1283910 Burkholderia phytofirmans PsJN 6277699 YP_001888849.1 CDS Bphyt_5117 NC_010676.1 1284196 1285320 D TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rfr:Rfer_4054 alanine dehydrogenase; alanine dehydrogenase 1284196..1285320 Burkholderia phytofirmans PsJN 6279585 YP_001888850.1 CDS Bphyt_5119 NC_010676.1 1286463 1287101 D KEGG: bte:BTH_II1927 alkyl hydroperoxide reductase subunit; alkyl hydroperoxide reductase subunit 1286463..1287101 Burkholderia phytofirmans PsJN 6279940 YP_001888851.1 CDS Bphyt_5120 NC_010676.1 1287202 1288491 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4727 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein complement(1287202..1288491) Burkholderia phytofirmans PsJN 6278857 YP_001888852.1 CDS Bphyt_5121 NC_010676.1 1288539 1289966 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bam:Bamb_1486 hypothetical protein; hypothetical protein complement(1288539..1289966) Burkholderia phytofirmans PsJN 6278023 YP_001888853.1 CDS Bphyt_5122 NC_010676.1 1290101 1290997 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sen:SACE_2781 transcriptional regulator, LysR family; LysR family transcriptional regulator 1290101..1290997 Burkholderia phytofirmans PsJN 6278251 YP_001888854.1 CDS Bphyt_5123 NC_010676.1 1291383 1292471 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rru:Rru_A0475 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(1291383..1292471) Burkholderia phytofirmans PsJN 6280021 YP_001888855.1 CDS Bphyt_5124 NC_010676.1 1292498 1293034 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_0515 alkylhydroperoxidase AhpD core; AhpD family alkylhydroperoxidase like protein complement(1292498..1293034) Burkholderia phytofirmans PsJN 6280080 YP_001888856.1 CDS Bphyt_5125 NC_010676.1 1293150 1294064 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0517 transcriptional regulator, LysR family; LysR family transcriptional regulator 1293150..1294064 Burkholderia phytofirmans PsJN 6277766 YP_001888857.1 CDS Bphyt_5126 NC_010676.1 1294238 1294879 R PFAM: protein of unknown function DUF1109; KEGG: bps:BPSL1688 hypothetical protein; hypothetical protein complement(1294238..1294879) Burkholderia phytofirmans PsJN 6277815 YP_001888858.1 CDS Bphyt_5127 NC_010676.1 1294971 1295750 R KEGG: bpl:BURPS1106A_2031 hypothetical protein; hypothetical protein complement(1294971..1295750) Burkholderia phytofirmans PsJN 6279370 YP_001888859.1 CDS Bphyt_5128 NC_010676.1 1295740 1296663 R PFAM: protein of unknown function DUF692; KEGG: bpl:BURPS1106A_2030 hypothetical protein; hypothetical protein complement(1295740..1296663) Burkholderia phytofirmans PsJN 6278682 YP_001888860.1 CDS Bphyt_5129 NC_010676.1 1296696 1297007 R KEGG: bpl:BURPS1106A_2029 hypothetical protein; hypothetical protein complement(1296696..1297007) Burkholderia phytofirmans PsJN 6277731 YP_001888861.1 CDS Bphyt_5130 NC_010676.1 1297166 1297807 R PFAM: protein of unknown function DUF1109; KEGG: bps:BPSL1687 hypothetical protein; hypothetical protein complement(1297166..1297807) Burkholderia phytofirmans PsJN 6279904 YP_001888862.1 CDS Bphyt_5131 NC_010676.1 1297804 1298349 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(1297804..1298349) Burkholderia phytofirmans PsJN 6278557 YP_001888863.1 CDS Bphyt_5132 NC_010676.1 1298366 1298686 R KEGG: xau:Xaut_2977 short-chain dehydrogenase/reductase SDR; hypothetical protein complement(1298366..1298686) Burkholderia phytofirmans PsJN 6278111 YP_001888864.1 CDS Bphyt_5133 NC_010676.1 1298770 1299471 R PFAM: Glutathione S-transferase domain; KEGG: xau:Xaut_0981 glutathione S-transferase domain; glutathione S-transferase domain complement(1298770..1299471) Burkholderia phytofirmans PsJN 6280208 YP_001888865.1 CDS Bphyt_5134 NC_010676.1 1299644 1300237 D PFAM: regulatory protein TetR; KEGG: bpt:Bpet1592 transcriptional regulator, TetR family; TetR family transcriptional regulator 1299644..1300237 Burkholderia phytofirmans PsJN 6279686 YP_001888866.1 CDS Bphyt_5135 NC_010676.1 1300369 1301142 R PFAM: protein of unknown function UPF0153; KEGG: bam:Bamb_3943 protein of unknown function UPF0153; hypothetical protein complement(1300369..1301142) Burkholderia phytofirmans PsJN 6277782 YP_001888867.1 CDS Bphyt_5136 NC_010676.1 1301432 1301821 D PFAM: Thioredoxin domain; KEGG: mrd:Mrad2831_2976 thioredoxin domain protein; thioredoxin domain 1301432..1301821 Burkholderia phytofirmans PsJN 6279847 YP_001888868.1 CDS Bphyt_5137 NC_010676.1 1301821 1302549 D PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mrd:Mrad2831_5394 cytochrome c biogenesis protein transmembrane region; cytochrome c biogenesis protein transmembrane region 1301821..1302549 Burkholderia phytofirmans PsJN 6278713 YP_001888869.1 CDS Bphyt_5138 NC_010676.1 1302614 1303534 R KEGG: mms:mma_0902 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(1302614..1303534) Burkholderia phytofirmans PsJN 6278150 YP_001888870.1 CDS Bphyt_5139 NC_010676.1 1303735 1305837 R PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rru:Rru_A3058 putative suppressor for copper-sensitivity B precursor; cytochrome c biogenesis protein transmembrane region complement(1303735..1305837) Burkholderia phytofirmans PsJN 6278144 YP_001888871.1 CDS Bphyt_5140 NC_010676.1 1305915 1306607 R PFAM: protein of unknown function DUF1223; KEGG: bra:BRADO5149 conserved hypothetical protein; putative signal peptide; hypothetical protein complement(1305915..1306607) Burkholderia phytofirmans PsJN 6280226 YP_001888872.1 CDS Bphyt_5141 NC_010676.1 1306880 1307560 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: xau:Xaut_2933 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 1306880..1307560 Burkholderia phytofirmans PsJN 6278140 YP_001888873.1 CDS Bphyt_5142 NC_010676.1 1307661 1308233 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1307661..1308233 Burkholderia phytofirmans PsJN 6279083 YP_001888874.1 CDS Bphyt_5143 NC_010676.1 1308230 1308871 D PFAM: protein of unknown function DUF1109; KEGG: bxe:Bxe_A2181 putative transmembrane protein DUF1109; hypothetical protein 1308230..1308871 Burkholderia phytofirmans PsJN 6278010 YP_001888875.1 CDS Bphyt_5144 NC_010676.1 1309144 1309389 D hypothetical protein 1309144..1309389 Burkholderia phytofirmans PsJN 6278948 YP_001888876.1 CDS Bphyt_5145 NC_010676.1 1309867 1310751 D PFAM: Patatin; KEGG: bur:Bcep18194_B2789 patatin; patatin 1309867..1310751 Burkholderia phytofirmans PsJN 6280379 YP_001888877.1 CDS Bphyt_5146 NC_010676.1 1310845 1311309 R PFAM: DoxX family protein; KEGG: bpl:BURPS1106A_2032 hypothetical protein; DoxX family protein complement(1310845..1311309) Burkholderia phytofirmans PsJN 6278119 YP_001888878.1 CDS Bphyt_5147 NC_010676.1 1311577 1311888 R KEGG: bpl:BURPS1106A_2029 hypothetical protein; hypothetical protein complement(1311577..1311888) Burkholderia phytofirmans PsJN 6280315 YP_001888879.1 CDS Bphyt_5148 NC_010676.1 1312010 1312216 D hypothetical protein 1312010..1312216 Burkholderia phytofirmans PsJN 6280424 YP_001888880.1 CDS Bphyt_5149 NC_010676.1 1312512 1314602 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; DoxX family protein; KEGG: lpp:lpp0727 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1312512..1314602 Burkholderia phytofirmans PsJN 6280109 YP_001888881.1 CDS Bphyt_5150 NC_010676.1 1314879 1316528 R KEGG: pol:Bpro_0533 sigma54 specific transcriptional regulator with PAS sensor, fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; SMART: PAS domain containing protein; AAA ATPase; PAS modulated Fis family sigma-54 specific transcriptional regulator complement(1314879..1316528) Burkholderia phytofirmans PsJN 6279778 YP_001888882.1 CDS Bphyt_5151 NC_010676.1 1316865 1317242 D PFAM: protein of unknown function DUF485; KEGG: mms:mma_0900 hypothetical protein; hypothetical protein 1316865..1317242 Burkholderia phytofirmans PsJN 6278139 YP_001888883.1 CDS Bphyt_5152 NC_010676.1 1317239 1318789 D TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: har:HEAR0668 putative sodium:solute symporter; putative pantothenate transporter; sodium solute transporter superfamily protein 1317239..1318789 Burkholderia phytofirmans PsJN 6278176 YP_001888884.1 CDS Bphyt_5153 NC_010676.1 1318862 1319548 D TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bpt:Bpet4904 haloacetate dehalogenase; type II haloacid dehalogenase 1318862..1319548 Burkholderia phytofirmans PsJN 6278916 YP_001888885.1 CDS Bphyt_5154 NC_010676.1 1320001 1320654 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pat:Patl_0274 redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 1320001..1320654 Burkholderia phytofirmans PsJN 6278758 YP_001888886.1 CDS Bphyt_5155 NC_010676.1 1320658 1321641 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: xau:Xaut_2974 protein of unknown function DUF6 transmembrane; hypothetical protein 1320658..1321641 Burkholderia phytofirmans PsJN 6278037 YP_001888887.1 CDS Bphyt_5156 NC_010676.1 1321652 1322356 D PFAM: Glutathione S-transferase domain; KEGG: xau:Xaut_2975 glutathione S-transferase domain; glutathione S-transferase domain 1321652..1322356 Burkholderia phytofirmans PsJN 6278033 YP_001888888.1 CDS Bphyt_5157 NC_010676.1 1322386 1323264 D PFAM: Glutathione S-transferase domain; KEGG: bja:blr2939 putative glutathione S-transferase YghU; glutathione S-transferase domain 1322386..1323264 Burkholderia phytofirmans PsJN 6278009 YP_001888889.1 CDS Bphyt_5159 NC_010676.1 1323788 1324684 R KEGG: bam:Bamb_6421 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(1323788..1324684) Burkholderia phytofirmans PsJN 6279584 YP_001888890.1 CDS Bphyt_5160 NC_010676.1 1324884 1326218 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1522 major facilitator superfamily (MFS) metabolite (proline/betaine)/H+ symporter; major facilitator superfamily protein complement(1324884..1326218) Burkholderia phytofirmans PsJN 6277708 YP_001888891.1 CDS Bphyt_5161 NC_010676.1 1326310 1327203 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_B1523 putative dehydrogenase; 6-phosphogluconate dehydrogenase complement(1326310..1327203) Burkholderia phytofirmans PsJN 6277692 YP_001888892.1 CDS Bphyt_5162 NC_010676.1 1327200 1328966 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(1327200..1328966) Burkholderia phytofirmans PsJN 6279534 YP_001888893.1 CDS Bphyt_5163 NC_010676.1 1329078 1329878 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B1525 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1329078..1329878) Burkholderia phytofirmans PsJN 6278615 YP_001888894.1 CDS Bphyt_5164 NC_010676.1 1329881 1331239 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1526 major facilitator superfamily (MFS) tartrate/H+ symporter; major facilitator superfamily protein complement(1329881..1331239) Burkholderia phytofirmans PsJN 6280225 YP_001888895.1 CDS Bphyt_5165 NC_010676.1 1331444 1332418 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1527 transcriptional regulator, LysR family; LysR family transcriptional regulator 1331444..1332418 Burkholderia phytofirmans PsJN 6279856 YP_001888896.1 CDS Bphyt_5166 NC_010676.1 1332774 1333652 R KEGG: bbt:BBta_1130 putative carboxyvinyl-carboxyphosphonate phosphorylmutase; carboxyvinyl-carboxyphosphonate phosphorylmutase complement(1332774..1333652) Burkholderia phytofirmans PsJN 6279452 YP_001888897.1 CDS Bphyt_5167 NC_010676.1 1333684 1335096 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4087 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(1333684..1335096) Burkholderia phytofirmans PsJN 6277522 YP_001888898.1 CDS Bphyt_5168 NC_010676.1 1335175 1335879 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bpt:Bpet2784 transcriptional regulator, GntR-family; GntR family transcriptional regulator complement(1335175..1335879) Burkholderia phytofirmans PsJN 6277938 YP_001888899.1 CDS Bphyt_5169 NC_010676.1 1336038 1336574 R PFAM: DinB family protein; KEGG: pmy:Pmen_2202 DinB family protein; DinB family protein complement(1336038..1336574) Burkholderia phytofirmans PsJN 6279751 YP_001888900.1 CDS Bphyt_5170 NC_010676.1 1336571 1337380 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: chy:CHY_0189 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(1336571..1337380) Burkholderia phytofirmans PsJN 6277527 YP_001888901.1 CDS Bphyt_5171 NC_010676.1 1337437 1338168 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_B2534 putative enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1337437..1338168 Burkholderia phytofirmans PsJN 6279360 YP_001888902.1 CDS Bphyt_5172 NC_010676.1 1338296 1339696 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_5934 major facilitator superfamily MFS_1; major facilitator superfamily protein 1338296..1339696 Burkholderia phytofirmans PsJN 6280422 YP_001888903.1 CDS Bphyt_5173 NC_010676.1 1339717 1341228 D PFAM: Aldehyde Dehydrogenase_; KEGG: msm:MSMEG_6874 aldehyde dehydrogenase; aldehyde dehydrogenase 1339717..1341228 Burkholderia phytofirmans PsJN 6280497 YP_001888904.1 CDS Bphyt_5175 NC_010676.1 1341829 1343262 R PFAM: Integrase catalytic region; KEGG: bam:Bamb_6516 integrase, catalytic region; integrase catalytic subunit complement(1341829..1343262) Burkholderia phytofirmans PsJN 6280478 YP_001888905.1 CDS Bphyt_5176 NC_010676.1 1343617 1344117 R KEGG: bur:Bcep18194_A4894 hypothetical protein; hypothetical protein complement(1343617..1344117) Burkholderia phytofirmans PsJN 6280532 YP_001888906.1 CDS Bphyt_5177 NC_010676.1 1344216 1344713 R KEGG: bur:Bcep18194_A4984 hypothetical protein; hypothetical protein complement(1344216..1344713) Burkholderia phytofirmans PsJN 6280397 YP_001888907.1 CDS Bphyt_5178 NC_010676.1 1344706 1347030 R KEGG: bur:Bcep18194_A4985 hypothetical protein; hypothetical protein complement(1344706..1347030) Burkholderia phytofirmans PsJN 6278810 YP_001888908.1 CDS Bphyt_5179 NC_010676.1 1347027 1348544 R PFAM: integrase family protein; KEGG: bur:Bcep18194_A4986 phage integrase; integrase family protein complement(1347027..1348544) Burkholderia phytofirmans PsJN 6278284 YP_001888909.1 CDS Bphyt_5180 NC_010676.1 1348604 1349182 D KEGG: bpt:Bpet3757 hypothetical protein; hypothetical protein 1348604..1349182 Burkholderia phytofirmans PsJN 6277500 YP_001888910.1 CDS Bphyt_5181 NC_010676.1 1349281 1350717 D PFAM: Integrase catalytic region; KEGG: bpt:Bpet3758 putative transposase; integrase catalytic subunit 1349281..1350717 Burkholderia phytofirmans PsJN 6277562 YP_001888911.1 CDS Bphyt_5182 NC_010676.1 1350714 1351571 D SMART: AAA ATPase; KEGG: bxe:Bxe_C0709 putative ATPase; AAA ATPase 1350714..1351571 Burkholderia phytofirmans PsJN 6277372 YP_001888912.1 CDS Bphyt_5183 NC_010676.1 1351573 1351788 D KEGG: bpt:Bpet3764 hypothetical protein; hypothetical protein 1351573..1351788 Burkholderia phytofirmans PsJN 6278153 YP_001888913.1 CDS Bphyt_5184 NC_010676.1 1351991 1353208 R PFAM: integrase family protein; KEGG: bur:Bcep18194_A4987 phage integrase; integrase family protein complement(1351991..1353208) Burkholderia phytofirmans PsJN 6278470 YP_001888914.1 CDS Bphyt_5185 NC_010676.1 1353381 1354754 R PFAM: phosphoesterase; KEGG: bxe:Bxe_A2871 phospholipase C; phospholipase C complement(1353381..1354754) Burkholderia phytofirmans PsJN 6278693 YP_001888915.1 CDS Bphyt_5186 NC_010676.1 1354976 1355428 R hypothetical protein complement(1354976..1355428) Burkholderia phytofirmans PsJN 6279897 YP_001888916.1 CDS Bphyt_5187 NC_010676.1 1355425 1355826 R KEGG: pap:PSPA7_3448 hypothetical protein; hypothetical protein complement(1355425..1355826) Burkholderia phytofirmans PsJN 6280177 YP_001888917.1 CDS Bphyt_5188 NC_010676.1 1356035 1356166 R hypothetical protein complement(1356035..1356166) Burkholderia phytofirmans PsJN 6277370 YP_001888918.1 CDS Bphyt_5189 NC_010676.1 1356288 1357013 D PFAM: regulatory protein DeoR; KEGG: bxe:Bxe_B1406 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 1356288..1357013 Burkholderia phytofirmans PsJN 6278102 YP_001888919.1 CDS Bphyt_5190 NC_010676.1 1357079 1358137 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1405 ABC sugar transporter, inner membrane subunit; monosaccharide-transporting ATPase complement(1357079..1358137) Burkholderia phytofirmans PsJN 6278458 YP_001888920.1 CDS Bphyt_5191 NC_010676.1 1358153 1359724 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1404 ABC sugar transporter, ATPase subunit; ABC transporter-like protein complement(1358153..1359724) Burkholderia phytofirmans PsJN 6280188 YP_001888921.1 CDS Bphyt_5192 NC_010676.1 1359802 1360806 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B1403 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator complement(1359802..1360806) Burkholderia phytofirmans PsJN 6278503 YP_001888922.1 CDS Bphyt_5193 NC_010676.1 1360902 1361960 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1402 ABC sugar transporter, inner membrane subunit; monosaccharide-transporting ATPase complement(1360902..1361960) Burkholderia phytofirmans PsJN 6278104 YP_001888923.1 CDS Bphyt_5194 NC_010676.1 1362000 1362986 R TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: bxe:Bxe_B1401 ribokinase; ribokinase complement(1362000..1362986) Burkholderia phytofirmans PsJN 6279782 YP_001888924.1 CDS Bphyt_5195 NC_010676.1 1363169 1365532 R PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B1400 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase complement(1363169..1365532) Burkholderia phytofirmans PsJN 6277838 YP_001888925.1 CDS Bphyt_5196 NC_010676.1 1365576 1366586 R KEGG: bxe:Bxe_B1399 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase complement(1365576..1366586) Burkholderia phytofirmans PsJN 6277939 YP_001888926.1 CDS Bphyt_5197 NC_010676.1 1366839 1368461 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1398 ABC sugar transporter, ATPase subunit; ABC transporter-like protein 1366839..1368461 Burkholderia phytofirmans PsJN 6280433 YP_001888927.1 CDS Bphyt_5198 NC_010676.1 1368458 1369459 D PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1397 ABC sugar transporter, inner membrane subunit; monosaccharide-transporting ATPase 1368458..1369459 Burkholderia phytofirmans PsJN 6277667 YP_001888928.1 CDS Bphyt_5199 NC_010676.1 1369527 1370672 D KEGG: bxe:Bxe_B1396 ABC sugar transporter, periplasmic ligand binding protein; sugar ABC transporter periplasmic ligand binding protein 1369527..1370672 Burkholderia phytofirmans PsJN 6278460 YP_001888929.1 CDS Bphyt_5200 NC_010676.1 1370803 1370973 D KEGG: bxe:Bxe_B1395 hypothetical protein; hypothetical protein 1370803..1370973 Burkholderia phytofirmans PsJN 6277887 YP_001888930.1 CDS Bphyt_5201 NC_010676.1 1371106 1371393 R KEGG: bxe:Bxe_B1394 hypothetical protein; hypothetical protein complement(1371106..1371393) Burkholderia phytofirmans PsJN 6277907 YP_001888931.1 CDS Bphyt_5202 NC_010676.1 1371664 1374918 D PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B1393 cation/multidrug efflux pump, RND family; acriflavin resistance protein 1371664..1374918 Burkholderia phytofirmans PsJN 6277872 YP_001888932.1 CDS Bphyt_5203 NC_010676.1 1374937 1376304 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B1392 RND efflux pump, membrane fusion protein, CzcB subfamily; RND family efflux transporter MFP subunit 1374937..1376304 Burkholderia phytofirmans PsJN 6278776 YP_001888933.1 CDS Bphyt_5204 NC_010676.1 1376332 1377819 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B1391 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 1376332..1377819 Burkholderia phytofirmans PsJN 6277991 YP_001888934.1 CDS Bphyt_5205 NC_010676.1 1377952 1381758 R KEGG: bxe:Bxe_A2118 hypothetical protein; hypothetical protein complement(1377952..1381758) Burkholderia phytofirmans PsJN 6278542 YP_001888935.1 CDS Bphyt_5206 NC_010676.1 1382237 1383070 D KEGG: bxe:Bxe_A3116 hypothetical protein; hypothetical protein 1382237..1383070 Burkholderia phytofirmans PsJN 6279568 YP_001888936.1 CDS Bphyt_5207 NC_010676.1 1383596 1384924 R KEGG: bxe:Bxe_A3118 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase; FliI/YscN family ATPase complement(1383596..1384924) Burkholderia phytofirmans PsJN 6280005 YP_001888937.1 CDS Bphyt_5208 NC_010676.1 1384937 1387012 R PFAM: type III secretion FHIPEP protein; KEGG: bxe:Bxe_A3119 putative membrane low calcium response protein, LcrD, type III secretion; type III secretion FHIPEP protein complement(1384937..1387012) Burkholderia phytofirmans PsJN 6277603 YP_001888938.1 CDS Bphyt_5209 NC_010676.1 1387014 1387754 R KEGG: bxe:Bxe_A3120 putative type III secretion transmembrane protein, EscU/SctU/YscU-like; type III secretion transmembrane protein, EscU/SctU/YscU-like protein complement(1387014..1387754) Burkholderia phytofirmans PsJN 6279078 YP_001888939.1 CDS Bphyt_5210 NC_010676.1 1387751 1388476 R PFAM: type III secretion system inner membrane R protein; KEGG: bxe:Bxe_A3121 putative type III secretion system inner membrane protein, HcrT/YscT-like; type III secretion system inner membrane R protein complement(1387751..1388476) Burkholderia phytofirmans PsJN 6277933 YP_001888940.1 CDS Bphyt_5211 NC_010676.1 1388476 1388751 R TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ family 3; KEGG: rso:RSp0859 HRP conserved HrcS transmembrane protein; type III secretion protein, HrpO family complement(1388476..1388751) Burkholderia phytofirmans PsJN 6279021 YP_001888941.1 CDS Bphyt_5212 NC_010676.1 1388748 1389395 R part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein complement(1388748..1389395) Burkholderia phytofirmans PsJN 6280326 YP_001888942.1 CDS Bphyt_5213 NC_010676.1 1389392 1390375 R PFAM: surface presentation of antigens (SPOA) protein; KEGG: bxe:Bxe_A3123 putative type III secretion protein, FliN like; surface presentation of antigens (SPOA) protein complement(1389392..1390375) Burkholderia phytofirmans PsJN 6280183 YP_001888943.1 CDS Bphyt_5214 NC_010676.1 1390372 1391103 R KEGG: bxe:Bxe_A3124 flagellar biosynthesis/type III secretory pathway protein like; flagellar biosynthesis/type III secretory pathway protein-like protein complement(1390372..1391103) Burkholderia phytofirmans PsJN 6279695 YP_001888944.1 CDS Bphyt_5215 NC_010676.1 1391097 1391672 R KEGG: bxe:Bxe_A3125 hypothetical protein; hypothetical protein complement(1391097..1391672) Burkholderia phytofirmans PsJN 6278094 YP_001888945.1 CDS Bphyt_5216 NC_010676.1 1391669 1392490 R TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein; KEGG: bxe:Bxe_A3126 secretory protein YscJ/FliF; type III secretion apparatus lipoprotein, YscJ/HrcJ family complement(1391669..1392490) Burkholderia phytofirmans PsJN 6277462 YP_001888946.1 CDS Bphyt_5217 NC_010676.1 1392490 1392828 R hypothetical protein complement(1392490..1392828) Burkholderia phytofirmans PsJN 6280531 YP_001888947.1 CDS Bphyt_5218 NC_010676.1 1392895 1393092 R hypothetical protein complement(1392895..1393092) Burkholderia phytofirmans PsJN 6278475 YP_001888948.1 CDS Bphyt_5219 NC_010676.1 1393232 1394332 R KEGG: bxe:Bxe_A3131 hypothetical protein; hypothetical protein complement(1393232..1394332) Burkholderia phytofirmans PsJN 6278681 YP_001888949.1 CDS Bphyt_5220 NC_010676.1 1394329 1396242 R TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: bxe:Bxe_A3132 putative type III secretion hypersensitivity response secretion protein, HrcC/HrpA1-like; type III secretion outer membrane pore, YscC/HrcC family complement(1394329..1396242) Burkholderia phytofirmans PsJN 6277309 YP_001888950.1 CDS Bphyt_5221 NC_010676.1 1396478 1396807 D KEGG: bxe:Bxe_A3133 hypothetical protein; hypothetical protein 1396478..1396807 Burkholderia phytofirmans PsJN 6278385 YP_001888951.1 CDS Bphyt_5222 NC_010676.1 1396960 1397223 D hypothetical protein 1396960..1397223 Burkholderia phytofirmans PsJN 6277874 YP_001888952.1 CDS Bphyt_5223 NC_010676.1 1397346 1398806 R TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B1390 heavy metal sensor signal transduction histidine kinases (STHK); heavy metal sensor signal transduction histidine kinase complement(1397346..1398806) Burkholderia phytofirmans PsJN 6277326 YP_001888953.1 CDS Bphyt_5224 NC_010676.1 1398806 1399483 R TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B1389 two component heavy metal response transcriptional regulator, winged helix family; two component heavy metal response winged helix family transcriptional regulator complement(1398806..1399483) Burkholderia phytofirmans PsJN 6280541 YP_001888954.1 CDS Bphyt_5225 NC_010676.1 1399620 1400534 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1387 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit; ABC transporter-like protein complement(1399620..1400534) Burkholderia phytofirmans PsJN 6278487 YP_001888955.1 CDS Bphyt_5226 NC_010676.1 1400594 1401565 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1386 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1400594..1401565) Burkholderia phytofirmans PsJN 6278461 YP_001888956.1 CDS Bphyt_5227 NC_010676.1 1401552 1403006 R TIGRFAM: allophanate hydrolase; PFAM: Amidase; KEGG: bxe:Bxe_B1385 putative UreA amidolyase; allophanate hydrolase complement(1401552..1403006) Burkholderia phytofirmans PsJN 6279126 YP_001888957.1 CDS Bphyt_5228 NC_010676.1 1403003 1406614 R TIGRFAM: urea amidolyase related protein; urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: bxe:Bxe_B1384 UreA amidolyase-related protein; urea carboxylase complement(1403003..1406614) Burkholderia phytofirmans PsJN 6277536 YP_001888958.1 CDS Bphyt_5229 NC_010676.1 1406611 1407267 R TIGRFAM: urea carboxylase-associated protein 1; KEGG: bxe:Bxe_B1383 hypothetical protein; urea carboxylase-associated protein 1 complement(1406611..1407267) Burkholderia phytofirmans PsJN 6278425 YP_001888959.1 CDS Bphyt_5230 NC_010676.1 1407279 1408034 R TIGRFAM: urea carboxylase-associated protein 2; KEGG: bxe:Bxe_B1382 hypothetical protein; urea carboxylase-associated protein 2 complement(1407279..1408034) Burkholderia phytofirmans PsJN 6278380 YP_001888960.1 CDS Bphyt_5231 NC_010676.1 1408690 1409745 R PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B1380 2OG-Fe(II) oxygenase superfamily; 2OG-Fe(II) oxygenase complement(1408690..1409745) Burkholderia phytofirmans PsJN 6280559 YP_001888961.1 CDS Bphyt_5232 NC_010676.1 1409755 1410657 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bxe:Bxe_B1379 hypothetical protein; xylose isomerase domain-containing protein complement(1409755..1410657) Burkholderia phytofirmans PsJN 6278778 YP_001888962.1 CDS Bphyt_5233 NC_010676.1 1410814 1411182 D KEGG: bxe:Bxe_B1378 putative transcriptional regulator, MarR family; MarR family transcriptional regulator 1410814..1411182 Burkholderia phytofirmans PsJN 6280477 YP_001888963.1 CDS Bphyt_5234 NC_010676.1 1411613 1412698 D KEGG: bxe:Bxe_B1377 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein; ABC nitrate/sulfonate/bicarbonate family transporter periplasmic ligand binding protein 1411613..1412698 Burkholderia phytofirmans PsJN 6280525 YP_001888964.1 CDS Bphyt_5235 NC_010676.1 1412856 1413899 D TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: bxe:Bxe_B1376 cell shape determining protein MreB/Mrl; rod shape-determining protein MreB 1412856..1413899 Burkholderia phytofirmans PsJN 6277366 YP_001888965.1 CDS Bphyt_5236 NC_010676.1 1413935 1414693 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B1375 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(1413935..1414693) Burkholderia phytofirmans PsJN 6278511 YP_001888966.1 CDS Bphyt_5237 NC_010676.1 1414729 1415124 R KEGG: bxe:Bxe_B1374 hypothetical protein; hypothetical protein complement(1414729..1415124) Burkholderia phytofirmans PsJN 6277994 YP_001888967.1 CDS Bphyt_5238 NC_010676.1 1415115 1415810 R PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_B1373 isochorismatase family protein; isochorismatase hydrolase complement(1415115..1415810) Burkholderia phytofirmans PsJN 6278490 YP_001888968.1 CDS Bphyt_5239 NC_010676.1 1415807 1417417 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1372 ABC transporter, duplicated ATPase subunits; ABC transporter-like protein complement(1415807..1417417) Burkholderia phytofirmans PsJN 6278138 YP_001888969.1 CDS Bphyt_5240 NC_010676.1 1417420 1418112 R PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_B1371 isochorismatase family protein; isochorismatase hydrolase complement(1417420..1418112) Burkholderia phytofirmans PsJN 6277594 YP_001888970.1 CDS Bphyt_5241 NC_010676.1 1418174 1419100 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1370 ABC transporter, inner membrane subunit; inner-membrane translocator complement(1418174..1419100) Burkholderia phytofirmans PsJN 6279578 YP_001888971.1 CDS Bphyt_5242 NC_010676.1 1419093 1420208 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1369 ABC transporter, inner membrane subunit; inner-membrane translocator complement(1419093..1420208) Burkholderia phytofirmans PsJN 6278242 YP_001888972.1 CDS Bphyt_5243 NC_010676.1 1420249 1421346 R PFAM: basic membrane lipoprotein; KEGG: bxe:Bxe_B1368 ABC transporter, periplasmic ligand binding protein; basic membrane lipoprotein complement(1420249..1421346) Burkholderia phytofirmans PsJN 6277576 YP_001888973.1 CDS Bphyt_5244 NC_010676.1 1421370 1423226 R catalyzes the hydrolysis of allophanate; allophanate hydrolase complement(1421370..1423226) Burkholderia phytofirmans PsJN 6278326 YP_001888974.1 CDS Bphyt_5245 NC_010676.1 1423445 1424200 R PFAM: regulatory protein TetR; KEGG: bja:blr2835 transcriptional regulatory protein; TetR family transcriptional regulator complement(1423445..1424200) Burkholderia phytofirmans PsJN 6280563 YP_001888975.1 CDS Bphyt_5246 NC_010676.1 1424295 1425212 R PFAM: inner-membrane translocator; KEGG: mms:mma_3562 ABC-type transport system, permease component; inner-membrane translocator complement(1424295..1425212) Burkholderia phytofirmans PsJN 6278493 YP_001888976.1 CDS Bphyt_5247 NC_010676.1 1425212 1426303 R PFAM: inner-membrane translocator; KEGG: mms:mma_3563 ABC-type uncharacterized transport system, permease component; inner-membrane translocator complement(1425212..1426303) Burkholderia phytofirmans PsJN 6277559 YP_001888977.1 CDS Bphyt_5248 NC_010676.1 1426300 1427928 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mms:mma_3564 ABC-type uncharacterized transport systems, ATPase component; ABC transporter-like protein complement(1426300..1427928) Burkholderia phytofirmans PsJN 6278064 YP_001888978.1 CDS Bphyt_5249 NC_010676.1 1427930 1428907 R PFAM: basic membrane lipoprotein; KEGG: mms:mma_3565 ABC-type transport system, periplasmic component/surface lipoprotein; basic membrane lipoprotein complement(1427930..1428907) Burkholderia phytofirmans PsJN 6279869 YP_001888979.1 CDS Bphyt_5250 NC_010676.1 1429117 1429917 D PFAM: isochorismatase hydrolase; KEGG: mms:mma_3561 isochorismatase hydrolase; isochorismatase hydrolase 1429117..1429917 Burkholderia phytofirmans PsJN 6280330 YP_001888980.1 CDS Bphyt_5251 NC_010676.1 1429914 1431113 D PFAM: Amidase; KEGG: xau:Xaut_4057 amidase; amidase 1429914..1431113 Burkholderia phytofirmans PsJN 6277896 YP_001888981.1 CDS Bphyt_5252 NC_010676.1 1431124 1432710 D KEGG: mex:Mext_4849 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1431124..1432710 Burkholderia phytofirmans PsJN 6277580 YP_001888982.1 CDS Bphyt_5253 NC_010676.1 1432780 1433370 R PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_B1365 hypothetical protein; flavin reductase domain-containing protein complement(1432780..1433370) Burkholderia phytofirmans PsJN 6280411 YP_001888983.1 CDS Bphyt_5254 NC_010676.1 1433361 1434113 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B1364 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(1433361..1434113) Burkholderia phytofirmans PsJN 6279720 YP_001888984.1 CDS Bphyt_5255 NC_010676.1 1434110 1435075 R PFAM: polysaccharide deacetylase; KEGG: bxe:Bxe_B1363 hypothetical protein; polysaccharide deacetylase complement(1434110..1435075) Burkholderia phytofirmans PsJN 6280253 YP_001888985.1 CDS Bphyt_5256 NC_010676.1 1435391 1436449 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B1362 ABC spermidine/putrescine transporter, ATPase subunit; ABC transporter-like protein 1435391..1436449 Burkholderia phytofirmans PsJN 6278382 YP_001888986.1 CDS Bphyt_5257 NC_010676.1 1436547 1437842 D KEGG: bxe:Bxe_B1361 ABC spermidine/putrescine transporter, periplasmic ligand binding protein; spermidine/putrescine ABC transporter substrate-binding protein 1436547..1437842 Burkholderia phytofirmans PsJN 6278365 YP_001888987.1 CDS Bphyt_5258 NC_010676.1 1437939 1438853 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1360 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1437939..1438853 Burkholderia phytofirmans PsJN 6280258 YP_001888988.1 CDS Bphyt_5259 NC_010676.1 1438856 1439761 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1359 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1438856..1439761 Burkholderia phytofirmans PsJN 6278409 YP_001888989.1 CDS Bphyt_5260 NC_010676.1 1439904 1441184 D PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B1358 hypothetical protein; acyl-CoA dehydrogenase type 2 domain 1439904..1441184 Burkholderia phytofirmans PsJN 6279878 YP_001888990.1 CDS Bphyt_5261 NC_010676.1 1441279 1441797 D KEGG: bxe:Bxe_B1357 hypothetical protein; hypothetical protein 1441279..1441797 Burkholderia phytofirmans PsJN 6279304 YP_001888991.1 CDS Bphyt_5262 NC_010676.1 1442226 1442996 D KEGG: pnu:Pnuc_0953 hypothetical protein; hypothetical protein 1442226..1442996 Burkholderia phytofirmans PsJN 6279727 YP_001888992.1 CDS Bphyt_5263 NC_010676.1 1443000 1443911 D KEGG: pnu:Pnuc_0952 hypothetical protein; hypothetical protein 1443000..1443911 Burkholderia phytofirmans PsJN 6279621 YP_001888993.1 CDS Bphyt_5264 NC_010676.1 1443908 1444756 D PFAM: MltA-interacting MipA family protein; KEGG: rso:RSc2284 putative transmembrane protein; MltA-interacting MipA family protein 1443908..1444756 Burkholderia phytofirmans PsJN 6280146 YP_001888994.1 CDS Bphyt_5265 NC_010676.1 1444813 1445517 R PFAM: protein of unknown function DUF480; KEGG: bxe:Bxe_B1356 hypothetical protein; hypothetical protein complement(1444813..1445517) Burkholderia phytofirmans PsJN 6279429 YP_001888995.1 CDS Bphyt_5266 NC_010676.1 1445724 1446296 D PFAM: Lipocalin family protein; KEGG: bxe:Bxe_B1355 putative outer membrane lipoprotein Blc; lipocalin family protein 1445724..1446296 Burkholderia phytofirmans PsJN 6279324 YP_001888996.1 CDS Bphyt_5267 NC_010676.1 1446377 1446949 D PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_B1354 transcriptional regulator, XRE family; XRE family transcriptional regulator 1446377..1446949 Burkholderia phytofirmans PsJN 6279562 YP_001888997.1 CDS Bphyt_5268 NC_010676.1 1446958 1447506 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B1353 putative acetyltransferase protein; N-acetyltransferase GCN5 1446958..1447506 Burkholderia phytofirmans PsJN 6279597 YP_001888998.1 CDS Bphyt_5269 NC_010676.1 1447518 1447913 R PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_B1352 phenylacetic acid degradation-related protein; thioesterase superfamily protein complement(1447518..1447913) Burkholderia phytofirmans PsJN 6278476 YP_001888999.1 CDS Bphyt_5270 NC_010676.1 1447925 1448557 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B1350 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA complement(1447925..1448557) Burkholderia phytofirmans PsJN 6278509 YP_001889000.1 CDS Bphyt_5271 NC_010676.1 1448710 1448970 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: reh:H16_A1998 putative lipoprotein; transport-associated protein 1448710..1448970 Burkholderia phytofirmans PsJN 6280142 YP_001889001.1 CDS Bphyt_5272 NC_010676.1 1448974 1450134 R TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: bxe:Bxe_B1346 acetate kinase; acetate kinase complement(1448974..1450134) Burkholderia phytofirmans PsJN 6279903 YP_001889002.1 CDS Bphyt_5273 NC_010676.1 1450148 1452541 R PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: bxe:Bxe_B1345 putative phosphoketolase; phosphoketolase complement(1450148..1452541) Burkholderia phytofirmans PsJN 6279809 YP_001889003.1 CDS Bphyt_5274 NC_010676.1 1452981 1453106 D KEGG: bxe:Bxe_B1344 hypothetical protein; hypothetical protein 1452981..1453106 Burkholderia phytofirmans PsJN 6279516 YP_001889004.1 CDS Bphyt_5275 NC_010676.1 1453231 1453767 D PFAM: Ankyrin; KEGG: bxe:Bxe_B1343 ankyrin domain protein; ankyrin 1453231..1453767 Burkholderia phytofirmans PsJN 6278910 YP_001889005.1 CDS Bphyt_5276 NC_010676.1 1453861 1454553 R PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B1342 hypothetical protein; haloacid dehalogenase domain-containing protein hydrolase complement(1453861..1454553) Burkholderia phytofirmans PsJN 6279020 YP_001889006.1 CDS Bphyt_5277 NC_010676.1 1454569 1455606 R similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase complement(1454569..1455606) Burkholderia phytofirmans PsJN 6277891 YP_001889007.1 CDS Bphyt_5278 NC_010676.1 1455995 1457329 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1339 major facilitator superfamily (MFS) sugar efflux pump; major facilitator superfamily protein complement(1455995..1457329) Burkholderia phytofirmans PsJN 6279333 YP_001889008.1 CDS Bphyt_5279 NC_010676.1 1457502 1458038 R KEGG: bxe:Bxe_B1338 hypothetical protein; hypothetical protein complement(1457502..1458038) Burkholderia phytofirmans PsJN 6280496 YP_001889009.1 CDS Bphyt_5280 NC_010676.1 1458184 1458480 R KEGG: bxe:Bxe_B1337 hypothetical protein; hypothetical protein complement(1458184..1458480) Burkholderia phytofirmans PsJN 6279128 YP_001889010.1 CDS Bphyt_5281 NC_010676.1 1458740 1459060 D PFAM: Thioredoxin domain; KEGG: bxe:Bxe_B1336 putative thioredoxin; thioredoxin domain 1458740..1459060 Burkholderia phytofirmans PsJN 6277324 YP_001889011.1 CDS Bphyt_5282 NC_010676.1 1459112 1459531 D PFAM: protein of unknown function UPF0047; KEGG: bxe:Bxe_B1335 protein of unknown function UPF0047; hypothetical protein 1459112..1459531 Burkholderia phytofirmans PsJN 6279611 YP_001889012.1 CDS Bphyt_5283 NC_010676.1 1459548 1460570 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bxe:Bxe_B1333 putative lipase; alpha/beta hydrolase complement(1459548..1460570) Burkholderia phytofirmans PsJN 6280336 YP_001889013.1 CDS Bphyt_5284 NC_010676.1 1460688 1462841 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B1330 periplasmic sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase complement(1460688..1462841) Burkholderia phytofirmans PsJN 6280049 YP_001889014.1 CDS Bphyt_5285 NC_010676.1 1463149 1464714 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1329 putative dioxygenase, ferredoxin reductase component; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1463149..1464714 Burkholderia phytofirmans PsJN 6279976 YP_001889015.1 CDS Bphyt_5286 NC_010676.1 1464743 1464925 D KEGG: bxe:Bxe_B1328 hypothetical protein; hypothetical protein 1464743..1464925 Burkholderia phytofirmans PsJN 6278963 YP_001889016.1 CDS Bphyt_5287 NC_010676.1 1465069 1467102 R PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_B1324 putative membrane transport protein; hypothetical protein complement(1465069..1467102) Burkholderia phytofirmans PsJN 6278090 YP_001889017.1 CDS Bphyt_5288 NC_010676.1 1467248 1467427 R KEGG: gbe:GbCGDNIH1_0678 hypothetical protein; hypothetical protein complement(1467248..1467427) Burkholderia phytofirmans PsJN 6280461 YP_001889018.1 CDS Bphyt_5289 NC_010676.1 1467580 1469796 R KEGG: bxe:Bxe_B1322 glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX complement(1467580..1469796) Burkholderia phytofirmans PsJN 6279061 YP_001889019.1 CDS Bphyt_5290 NC_010676.1 1470065 1470469 D PFAM: PRC-barrel domain protein; KEGG: bxe:Bxe_B1321 hypothetical protein; PRC-barrel domain-containing protein 1470065..1470469 Burkholderia phytofirmans PsJN 6277358 YP_001889020.1 CDS Bphyt_5291 NC_010676.1 1470677 1471135 R PFAM: response regulator receiver; KEGG: bxe:Bxe_B1316 response regulator receiver domain protein(CheY); response regulator receiver protein complement(1470677..1471135) Burkholderia phytofirmans PsJN 6278918 YP_001889021.1 CDS Bphyt_5292 NC_010676.1 1471356 1473032 R catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase complement(1471356..1473032) Burkholderia phytofirmans PsJN 6279972 YP_001889022.1 CDS Bphyt_5293 NC_010676.1 1473029 1474177 R KEGG: bxe:Bxe_B1314 putative exonuclease involved in mRNA processing; exonuclease involved in mRNA processing complement(1473029..1474177) Burkholderia phytofirmans PsJN 6278390 YP_001889023.1 CDS Bphyt_5294 NC_010676.1 1474412 1475314 D PFAM: ribonuclease BN; KEGG: bxe:Bxe_B1313 ribonuclease BN; ribonuclease BN 1474412..1475314 Burkholderia phytofirmans PsJN 6279269 YP_001889024.1 CDS Bphyt_5295 NC_010676.1 1475450 1476253 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B1312 putative hydrolase; alpha/beta fold family hydrolase 1475450..1476253 Burkholderia phytofirmans PsJN 6278451 YP_001889025.1 CDS Bphyt_5296 NC_010676.1 1476258 1478588 D KEGG: bxe:Bxe_B1311 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 1476258..1478588 Burkholderia phytofirmans PsJN 6279072 YP_001889026.1 CDS Bphyt_5297 NC_010676.1 1478710 1479813 D PFAM: AFG1-family ATPase; KEGG: cvi:CV_3022 probable nucleotide-binding protein; AFG1 family ATPase 1478710..1479813 Burkholderia phytofirmans PsJN 6278181 YP_001889027.1 CDS Bphyt_5298 NC_010676.1 1480022 1481107 D KEGG: bxe:Bxe_B1310 hypothetical protein; hypothetical protein 1480022..1481107 Burkholderia phytofirmans PsJN 6280545 YP_001889028.1 CDS Bphyt_5299 NC_010676.1 1481224 1483308 R TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: bxe:Bxe_B1309 transketolase; transketolase complement(1481224..1483308) Burkholderia phytofirmans PsJN 6279372 YP_001889029.1 CDS Bphyt_5300 NC_010676.1 1483570 1484115 R KEGG: bxe:Bxe_B1308 hypothetical protein; hypothetical protein complement(1483570..1484115) Burkholderia phytofirmans PsJN 6278770 YP_001889030.1 CDS Bphyt_5301 NC_010676.1 1484374 1484544 R KEGG: bam:Bamb_6121 hypothetical protein; hypothetical protein complement(1484374..1484544) Burkholderia phytofirmans PsJN 6279884 YP_001889031.1 CDS Bphyt_5302 NC_010676.1 1484597 1484857 R KEGG: bxe:Bxe_B1307 hypothetical protein; hypothetical protein complement(1484597..1484857) Burkholderia phytofirmans PsJN 6279633 YP_001889032.1 CDS Bphyt_5303 NC_010676.1 1485013 1485249 D KEGG: bxe:Bxe_B1306 hypothetical protein; hypothetical protein 1485013..1485249 Burkholderia phytofirmans PsJN 6277780 YP_001889033.1 CDS Bphyt_5304 NC_010676.1 1485301 1485546 R KEGG: bxe:Bxe_B1305 hypothetical protein; hypothetical protein complement(1485301..1485546) Burkholderia phytofirmans PsJN 6280219 YP_001889034.1 CDS Bphyt_5305 NC_010676.1 1485713 1485943 D KEGG: ana:all3916 unknown protein; hypothetical protein 1485713..1485943 Burkholderia phytofirmans PsJN 6279132 YP_001889035.1 CDS Bphyt_5306 NC_010676.1 1486104 1488470 D TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bxe:Bxe_B1304 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase molybdopterin subunit 1486104..1488470 Burkholderia phytofirmans PsJN 6279921 YP_001889036.1 CDS Bphyt_5307 NC_010676.1 1488601 1489686 R PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B1296 outer membrane protein (porin); porin complement(1488601..1489686) Burkholderia phytofirmans PsJN 6278994 YP_001889037.1 CDS Bphyt_5308 NC_010676.1 1490008 1491237 D PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bxe:Bxe_B1301 hypothetical protein; cobaltochelatase 1490008..1491237 Burkholderia phytofirmans PsJN 6280316 YP_001889038.1 CDS Bphyt_5309 NC_010676.1 1491243 1492991 D SMART: von Willebrand factor type A; KEGG: bxe:Bxe_B1300 putative cobalamin biosynthesis protein CobT; hypothetical protein 1491243..1492991 Burkholderia phytofirmans PsJN 6278656 YP_001889039.1 CDS Bphyt_5310 NC_010676.1 1493019 1493852 R PFAM: glutamine amidotransferase class-II; KEGG: bxe:Bxe_B1298 hypothetical protein; glutamine amidotransferase complement(1493019..1493852) Burkholderia phytofirmans PsJN 6278008 YP_001889040.1 CDS Bphyt_5311 NC_010676.1 1493940 1494617 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bxe:Bxe_B1297 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-like protein complement(1493940..1494617) Burkholderia phytofirmans PsJN 6279467 YP_001889041.1 CDS Bphyt_5312 NC_010676.1 1494991 1495206 D KEGG: bxe:Bxe_B1296 hypothetical protein; hypothetical protein 1494991..1495206 Burkholderia phytofirmans PsJN 6280196 YP_001889042.1 CDS Bphyt_5313 NC_010676.1 1495203 1496675 D PFAM: Na+/solute symporter; KEGG: bxe:Bxe_B1295 Na+/monocarboxylate symporter, SSS family; Na+/solute symporter 1495203..1496675 Burkholderia phytofirmans PsJN 6280132 YP_001889043.1 CDS glgA NC_010676.1 1496982 1498583 D catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 1496982..1498583 Burkholderia phytofirmans PsJN 6279853 YP_001889044.1 CDS Bphyt_5315 NC_010676.1 1498666 1499055 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpm:BURPS1710b_A1761 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein; glyoxalase/bleomycin resistance protein/dioxygenase 1498666..1499055 Burkholderia phytofirmans PsJN 6280234 YP_001889045.1 CDS Bphyt_5316 NC_010676.1 1499211 1499873 D PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_A4988 glutathione S-transferase-like; glutathione S-transferase domain 1499211..1499873 Burkholderia phytofirmans PsJN 6278877 YP_001889046.1 CDS Bphyt_5317 NC_010676.1 1499983 1500837 R KEGG: bxe:Bxe_B1278 putative phytochelatin synthase; phytochelatin synthase complement(1499983..1500837) Burkholderia phytofirmans PsJN 6278060 YP_001889047.1 CDS Bphyt_5318 NC_010676.1 1501035 1501265 D PFAM: protein of unknown function DUF1289; KEGG: bxe:Bxe_B1997 hypothetical protein; hypothetical protein 1501035..1501265 Burkholderia phytofirmans PsJN 6279472 YP_001889048.1 CDS Bphyt_5319 NC_010676.1 1501275 1502339 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B1277 periplasmic sensor diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(1501275..1502339) Burkholderia phytofirmans PsJN 6278075 YP_001889049.1 CDS Bphyt_5320 NC_010676.1 1502380 1503108 R KEGG: bxe:Bxe_B1276 hypothetical protein; hypothetical protein complement(1502380..1503108) Burkholderia phytofirmans PsJN 6278134 YP_001889050.1 CDS Bphyt_5321 NC_010676.1 1503740 1504867 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_B1269 putative NADH-flavin oxidoreductase / NADH oxidase; NADH:flavin oxidoreductase 1503740..1504867 Burkholderia phytofirmans PsJN 6278397 YP_001889051.1 CDS Bphyt_5322 NC_010676.1 1504945 1505934 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B1273 putative oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 1504945..1505934 Burkholderia phytofirmans PsJN 6280227 YP_001889052.1 CDS Bphyt_5323 NC_010676.1 1505931 1506872 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2666 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1505931..1506872) Burkholderia phytofirmans PsJN 6277595 YP_001889053.1 CDS Bphyt_5324 NC_010676.1 1506966 1507646 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pat:Patl_0274 redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 1506966..1507646 Burkholderia phytofirmans PsJN 6280175 YP_001889054.1 CDS Bphyt_5325 NC_010676.1 1507671 1508015 R PFAM: blue (type 1) copper domain protein; KEGG: bxe:Bxe_B1272 hypothetical protein; blue (type 1) copper domain-containing protein complement(1507671..1508015) Burkholderia phytofirmans PsJN 6280169 YP_001889055.1 CDS Bphyt_5326 NC_010676.1 1508049 1508993 R PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B1271 hypothetical protein; metallophosphoesterase complement(1508049..1508993) Burkholderia phytofirmans PsJN 6280437 YP_001889056.1 CDS Bphyt_5327 NC_010676.1 1509373 1510119 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B1270 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1509373..1510119 Burkholderia phytofirmans PsJN 6278650 YP_001889057.1 CDS Bphyt_5328 NC_010676.1 1510188 1510835 D PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_B1268 glutathione S-transferase; glutathione S-transferase domain 1510188..1510835 Burkholderia phytofirmans PsJN 6280269 YP_001889058.1 CDS Bphyt_5329 NC_010676.1 1510930 1513113 R PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: bmu:Bmul_2903 peptidase M1 membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase complement(1510930..1513113) Burkholderia phytofirmans PsJN 6278902 YP_001889059.1 CDS Bphyt_5330 NC_010676.1 1513702 1514703 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B1266 aldo/keto reductase; aldo/keto reductase complement(1513702..1514703) Burkholderia phytofirmans PsJN 6279026 YP_001889060.1 CDS Bphyt_5331 NC_010676.1 1514795 1515034 R hypothetical protein complement(1514795..1515034) Burkholderia phytofirmans PsJN 6279123 YP_001889061.1 CDS Bphyt_5332 NC_010676.1 1515044 1515682 R PFAM: Glutathione S-transferase domain; KEGG: pol:Bpro_4773 glutathione S-transferase-like; glutathione S-transferase domain complement(1515044..1515682) Burkholderia phytofirmans PsJN 6277953 YP_001889062.1 CDS Bphyt_5333 NC_010676.1 1515722 1516171 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: cak:Caul_1042 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein complement(1515722..1516171) Burkholderia phytofirmans PsJN 6278002 YP_001889063.1 CDS Bphyt_5334 NC_010676.1 1516168 1516503 R PFAM: regulatory protein MarR; regulatory protein ArsR; KEGG: cak:Caul_1041 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(1516168..1516503) Burkholderia phytofirmans PsJN 6277663 YP_001889064.1 CDS Bphyt_5335 NC_010676.1 1516664 1517569 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3447 transcriptional regulator, LysR family; LysR family transcriptional regulator 1516664..1517569 Burkholderia phytofirmans PsJN 6279131 YP_001889065.1 CDS Bphyt_5336 NC_010676.1 1517594 1518208 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B1265 HAD-superfamily hydrolase, subfamily IA, variant3; HAD-superfamily hydrolase complement(1517594..1518208) Burkholderia phytofirmans PsJN 6279514 YP_001889066.1 CDS Bphyt_5337 NC_010676.1 1518413 1519564 R PFAM: Extracellular ligand-binding receptor; KEGG: bvi:Bcep1808_6419 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(1518413..1519564) Burkholderia phytofirmans PsJN 6279099 YP_001889067.1 CDS Bphyt_5338 NC_010676.1 1519700 1520929 R PFAM: FAD dependent oxidoreductase; KEGG: bvi:Bcep1808_6420 D-amino-acid dehydrogenase; FAD dependent oxidoreductase complement(1519700..1520929) Burkholderia phytofirmans PsJN 6280418 YP_001889068.1 CDS Bphyt_5339 NC_010676.1 1521326 1522735 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bvi:Bcep1808_6422 putative transcriptional regulator, GntR family; GntR family transcriptional regulator 1521326..1522735 Burkholderia phytofirmans PsJN 6278498 YP_001889069.1 CDS Bphyt_5340 NC_010676.1 1522856 1523941 D KEGG: bam:Bamb_4334 hypothetical protein; hypothetical protein 1522856..1523941 Burkholderia phytofirmans PsJN 6278373 YP_001889070.1 CDS Bphyt_5341 NC_010676.1 1524003 1524962 R KEGG: bxe:Bxe_B1263 hypothetical protein; hypothetical protein complement(1524003..1524962) Burkholderia phytofirmans PsJN 6280081 YP_001889071.1 CDS Bphyt_5342 NC_010676.1 1525404 1526768 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A1029 sigma54 specific transcriptional regulator, fis family; Fis family sigma-54 specific transcriptional regulator complement(1525404..1526768) Burkholderia phytofirmans PsJN 6278207 YP_001889072.1 CDS Bphyt_5343 NC_010676.1 1527038 1528201 R PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: bxe:Bxe_B1262 putative epoxide hydrolase; epoxide hydrolase domain-containing protein complement(1527038..1528201) Burkholderia phytofirmans PsJN 6280543 YP_001889073.1 CDS Bphyt_5344 NC_010676.1 1528349 1528720 D PFAM: LrgA family protein; KEGG: bch:Bcen2424_6134 LrgA family protein; LrgA family protein 1528349..1528720 Burkholderia phytofirmans PsJN 6278960 YP_001889074.1 CDS Bphyt_5345 NC_010676.1 1528717 1529457 D PFAM: LrgB family protein; KEGG: bmu:Bmul_6059 LrgB family protein; LrgB family protein 1528717..1529457 Burkholderia phytofirmans PsJN 6279804 YP_001889075.1 CDS Bphyt_5346 NC_010676.1 1529515 1530294 D KEGG: rme:Rmet_4019 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 1529515..1530294 Burkholderia phytofirmans PsJN 6279272 YP_001889076.1 CDS Bphyt_5347 NC_010676.1 1530341 1531324 R KEGG: mgr:MGG_01858 hypothetical protein; hypothetical protein complement(1530341..1531324) Burkholderia phytofirmans PsJN 6279035 YP_001889077.1 CDS Bphyt_5348 NC_010676.1 1531646 1532545 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_B1260 hypothetical protein; hypothetical protein complement(1531646..1532545) Burkholderia phytofirmans PsJN 6279657 YP_001889078.1 CDS Bphyt_5349 NC_010676.1 1532628 1532852 R hypothetical protein complement(1532628..1532852) Burkholderia phytofirmans PsJN 6279891 YP_001889079.1 CDS Bphyt_5350 NC_010676.1 1532993 1534666 D PFAM: glycoside hydrolase family 37; KEGG: bpm:BURPS1710b_A2235 trehalase; alpha,alpha-trehalase 1532993..1534666 Burkholderia phytofirmans PsJN 6277569 YP_001889080.1 CDS Bphyt_5351 NC_010676.1 1534792 1535379 D KEGG: bxe:Bxe_B1259 putative alkylated DNA repair protein; alkylated DNA repair protein 1534792..1535379 Burkholderia phytofirmans PsJN 6277584 YP_001889081.1 CDS Bphyt_5352 NC_010676.1 1535474 1536211 R PFAM: carbonic anhydrase; KEGG: bxe:Bxe_B1257 putative carbonic anhydrase precursor; carbonic anhydrase complement(1535474..1536211) Burkholderia phytofirmans PsJN 6277642 YP_001889082.1 CDS Bphyt_5353 NC_010676.1 1536330 1536965 R PFAM: carbonic anhydrase; KEGG: bxe:Bxe_B1256 carbonate dehydratase; carbonate dehydratase complement(1536330..1536965) Burkholderia phytofirmans PsJN 6277512 YP_001889083.1 CDS Bphyt_5354 NC_010676.1 1537295 1537603 R KEGG: bxe:Bxe_B1255 hypothetical protein; hypothetical protein complement(1537295..1537603) Burkholderia phytofirmans PsJN 6277352 YP_001889084.1 CDS Bphyt_5355 NC_010676.1 1537749 1538900 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1254 outer membrane porin, OmpC family; porin complement(1537749..1538900) Burkholderia phytofirmans PsJN 6280547 YP_001889085.1 CDS Bphyt_5356 NC_010676.1 1539201 1539467 R KEGG: bxe:Bxe_B1253 hypothetical protein; hypothetical protein complement(1539201..1539467) Burkholderia phytofirmans PsJN 6279315 YP_001889086.1 CDS Bphyt_5357 NC_010676.1 1539683 1541176 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1252 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein 1539683..1541176 Burkholderia phytofirmans PsJN 6279393 YP_001889087.1 CDS Bphyt_5358 NC_010676.1 1541243 1542367 R KEGG: rso:RS03192 probable lipoprotein signal peptide; lipoprotein signal peptide complement(1541243..1542367) Burkholderia phytofirmans PsJN 6280283 YP_001889088.1 CDS Bphyt_5359 NC_010676.1 1542370 1543263 R PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: rso:RS03191 probable transcription regulator protein; AraC family transcriptional regulator complement(1542370..1543263) Burkholderia phytofirmans PsJN 6279529 YP_001889089.1 CDS Bphyt_5360 NC_010676.1 1543435 1544328 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV_3257 probable transcriptional regulator LysR family; LysR family transcriptional regulator complement(1543435..1544328) Burkholderia phytofirmans PsJN 6278131 YP_001889090.1 CDS Bphyt_5361 NC_010676.1 1544520 1545497 D catalyzes the formation of putrescine from agmatine; agmatinase 1544520..1545497 Burkholderia phytofirmans PsJN 6279654 YP_001889091.1 CDS Bphyt_5362 NC_010676.1 1545539 1546639 D PFAM: extracellular solute-binding protein family 1; KEGG: cvi:CV_1957 polyamine ABC transporter system, substrate-binding protein; family 1 extracellular solute-binding protein 1545539..1546639 Burkholderia phytofirmans PsJN 6280184 YP_001889092.1 CDS Bphyt_5363 NC_010676.1 1546667 1547599 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1251 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1546667..1547599) Burkholderia phytofirmans PsJN 6278384 YP_001889093.1 CDS Bphyt_5364 NC_010676.1 1547735 1550029 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1547735..1550029 Burkholderia phytofirmans PsJN 6280325 YP_001889094.1 CDS Bphyt_5365 NC_010676.1 1550135 1550860 R KEGG: bxe:Bxe_B1249 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase complement(1550135..1550860) Burkholderia phytofirmans PsJN 6278472 YP_001889095.1 CDS Bphyt_5366 NC_010676.1 1550923 1551651 R CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase complement(1550923..1551651) Burkholderia phytofirmans PsJN 6279202 YP_001889096.1 CDS cbiD NC_010676.1 1551648 1552745 R Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase complement(1551648..1552745) Burkholderia phytofirmans PsJN 6279487 YP_001889097.1 CDS Bphyt_5368 NC_010676.1 1552792 1554015 R KEGG: bxe:Bxe_B1246 precorrin-6Y C5,15-methyltransferase(decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE complement(1552792..1554015) Burkholderia phytofirmans PsJN 6279508 YP_001889098.1 CDS Bphyt_5369 NC_010676.1 1554363 1555886 D TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bxe:Bxe_B1245 putative oxidoreductase; precorrin-3B synthase 1554363..1555886 Burkholderia phytofirmans PsJN 6279105 YP_001889099.1 CDS cobH NC_010676.1 1555879 1556505 D catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 1555879..1556505 Burkholderia phytofirmans PsJN 6279680 YP_001889100.1 CDS Bphyt_5371 NC_010676.1 1556506 1557237 D catalyzes the formation of precorrin-3 from precorrin-2; precorrin-2 C(20)-methyltransferase 1556506..1557237 Burkholderia phytofirmans PsJN 6279764 YP_001889101.1 CDS Bphyt_5372 NC_010676.1 1557234 1558937 D TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: bxe:Bxe_B1242 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 1557234..1558937 Burkholderia phytofirmans PsJN 6280017 YP_001889102.1 CDS Bphyt_5373 NC_010676.1 1558953 1559564 R KEGG: bxe:Bxe_B1239 hypothetical protein; hypothetical protein complement(1558953..1559564) Burkholderia phytofirmans PsJN 6280028 YP_001889103.1 CDS Bphyt_5374 NC_010676.1 1559561 1560043 R KEGG: bxe:Bxe_B1238 hypothetical protein; hypothetical protein complement(1559561..1560043) Burkholderia phytofirmans PsJN 6279513 YP_001889104.1 CDS Bphyt_5375 NC_010676.1 1560064 1560540 R PFAM: protein of unknown function DUF796; KEGG: bxe:Bxe_B1237 hypothetical protein; hypothetical protein complement(1560064..1560540) Burkholderia phytofirmans PsJN 6279626 YP_001889105.1 CDS Bphyt_5376 NC_010676.1 1560807 1563431 R PFAM: SMC domain protein; KEGG: bxe:Bxe_B1236 putative GTP-binding protein; SMC domain-containing protein complement(1560807..1563431) Burkholderia phytofirmans PsJN 6279719 YP_001889106.1 CDS Bphyt_5377 NC_010676.1 1563428 1564570 R PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B1235 putative exonuclease; metallophosphoesterase complement(1563428..1564570) Burkholderia phytofirmans PsJN 6280042 YP_001889107.1 CDS Bphyt_5378 NC_010676.1 1564799 1566088 D PFAM: protein of unknown function DUF445; KEGG: bxe:Bxe_B1234 hypothetical protein; hypothetical protein 1564799..1566088 Burkholderia phytofirmans PsJN 6279985 YP_001889108.1 CDS Bphyt_5379 NC_010676.1 1566225 1568177 D PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_B1233 putative membrane transport protein; hypothetical protein 1566225..1568177 Burkholderia phytofirmans PsJN 6279205 YP_001889109.1 CDS Bphyt_5380 NC_010676.1 1568340 1570091 D PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1226 hypothetical protein; FAD-dependent oxidoreductase 1568340..1570091 Burkholderia phytofirmans PsJN 6279349 YP_001889110.1 CDS Bphyt_5381 NC_010676.1 1570120 1570311 D KEGG: bxe:Bxe_B1225 hypothetical protein; hypothetical protein 1570120..1570311 Burkholderia phytofirmans PsJN 6278866 YP_001889111.1 CDS Bphyt_5382 NC_010676.1 1570369 1571352 R ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase complement(1570369..1571352) Burkholderia phytofirmans PsJN 6279435 YP_001889112.1 CDS Bphyt_5383 NC_010676.1 1571357 1572148 R PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B1223 hypothetical protein; aldolase II superfamily protein complement(1571357..1572148) Burkholderia phytofirmans PsJN 6279101 YP_001889113.1 CDS Bphyt_5384 NC_010676.1 1572202 1573401 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(1572202..1573401) Burkholderia phytofirmans PsJN 6279002 YP_001889114.1 CDS Bphyt_5385 NC_010676.1 1573638 1574579 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1221 transcriptional regulator, LysR family; LysR family transcriptional regulator 1573638..1574579 Burkholderia phytofirmans PsJN 6278841 YP_001889115.1 CDS Bphyt_5386 NC_010676.1 1574684 1575502 R PFAM: regulatory protein LuxR; KEGG: bxe:Bxe_B1220 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(1574684..1575502) Burkholderia phytofirmans PsJN 6277669 YP_001889116.1 CDS Bphyt_5387 NC_010676.1 1575698 1576825 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B1219 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase complement(1575698..1576825) Burkholderia phytofirmans PsJN 6278195 YP_001889117.1 CDS Bphyt_5388 NC_010676.1 1576835 1577449 R PFAM: CheB methylesterase; KEGG: bxe:Bxe_B1218 CheB methylesterase; CheB methylesterase complement(1576835..1577449) Burkholderia phytofirmans PsJN 6279909 YP_001889118.1 CDS Bphyt_5389 NC_010676.1 1577460 1578305 R PFAM: MCP methyltransferase CheR-type; KEGG: bxe:Bxe_B1217 CheR methyltransferase; CheR-type MCP methyltransferase complement(1577460..1578305) Burkholderia phytofirmans PsJN 6278426 YP_001889119.1 CDS Bphyt_5390 NC_010676.1 1578324 1581911 R PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: bxe:Bxe_B1216 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase complement(1578324..1581911) Burkholderia phytofirmans PsJN 6279218 YP_001889120.1 CDS katE NC_010676.1 1582546 1584678 R Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; hydroperoxidase II complement(1582546..1584678) Burkholderia phytofirmans PsJN 6279023 YP_001889121.1 CDS Bphyt_5393 NC_010676.1 1584884 1585780 R PFAM: MltA-interacting MipA family protein; KEGG: bxe:Bxe_B1214 hypothetical protein; MltA-interacting MipA family protein complement(1584884..1585780) Burkholderia phytofirmans PsJN 6278432 YP_001889122.1 CDS Bphyt_5394 NC_010676.1 1586152 1586898 R TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: bxe:Bxe_B0817 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase complement(1586152..1586898) Burkholderia phytofirmans PsJN 6279858 YP_001889123.1 CDS Bphyt_5395 NC_010676.1 1586922 1587446 R TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bcm:Bcenmc03_6721 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase complement(1586922..1587446) Burkholderia phytofirmans PsJN 6279842 YP_001889124.1 CDS Bphyt_5396 NC_010676.1 1587595 1588122 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_5156 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(1587595..1588122) Burkholderia phytofirmans PsJN 6278935 YP_001889125.1 CDS Bphyt_5397 NC_010676.1 1588287 1589303 D catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 1588287..1589303 Burkholderia phytofirmans PsJN 6279702 YP_001889126.1 CDS Bphyt_5398 NC_010676.1 1589300 1590187 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1211 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1589300..1590187) Burkholderia phytofirmans PsJN 6279013 YP_001889127.1 CDS Bphyt_5399 NC_010676.1 1590319 1591044 D PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B1210 hypothetical protein; Pirin domain-containing protein 1590319..1591044 Burkholderia phytofirmans PsJN 6279011 YP_001889128.1 CDS Bphyt_5400 NC_010676.1 1591122 1591535 D PFAM: DoxX family protein; KEGG: bxe:Bxe_B1209 hypothetical protein; DoxX family protein 1591122..1591535 Burkholderia phytofirmans PsJN 6280149 YP_001889129.1 CDS Bphyt_5401 NC_010676.1 1591619 1592773 R PFAM: fatty acid desaturase; KEGG: bxe:Bxe_B1208 alkane-1 monooxygenase; Alkane 1-monooxygenase complement(1591619..1592773) Burkholderia phytofirmans PsJN 6280150 YP_001889130.1 CDS Bphyt_5402 NC_010676.1 1593063 1594655 R TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: bxe:Bxe_B1206 AhpF; alkyl hydroperoxide reductase subunit F complement(1593063..1594655) Burkholderia phytofirmans PsJN 6278883 YP_001889131.1 CDS Bphyt_5403 NC_010676.1 1594808 1595371 R TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_B1205 AhpC; peroxiredoxin complement(1594808..1595371) Burkholderia phytofirmans PsJN 6279642 YP_001889132.1 CDS Bphyt_5404 NC_010676.1 1595511 1597547 R KEGG: bxe:Bxe_B1204 sigma54 specific transcriptional regulator with PAS sensor, fis family; TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; SMART: AAA ATPase; Fis family proprionate catabolism activator complement(1595511..1597547) Burkholderia phytofirmans PsJN 6278430 YP_001889133.1 CDS Bphyt_5405 NC_010676.1 1597707 1598588 D KEGG: bxe:Bxe_B1203 putative carboxyvinyl-carboxyphosphonate phosphorylmutase; carboxyvinyl-carboxyphosphonate phosphorylmutase 1597707..1598588 Burkholderia phytofirmans PsJN 6277924 YP_001889134.1 CDS Bphyt_5406 NC_010676.1 1599116 1600555 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1202 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein 1599116..1600555 Burkholderia phytofirmans PsJN 6277989 YP_001889135.1 CDS Bphyt_5407 NC_010676.1 1600593 1601027 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B1201 hypothetical protein; N-acetyltransferase GCN5 1600593..1601027 Burkholderia phytofirmans PsJN 6277976 YP_001889136.1 CDS Bphyt_5408 NC_010676.1 1601306 1601974 D PFAM: cation efflux protein; KEGG: bxe:Bxe_B1200 heavy metal/H+ antiporter, CDF family; cation efflux protein 1601306..1601974 Burkholderia phytofirmans PsJN 6278105 YP_001889137.1 CDS Bphyt_5409 NC_010676.1 1601994 1602881 R KEGG: bxe:Bxe_B1199 procollagen-proline,2-oxoglutarate-4-dioxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; procollagen-proline dioxygenase complement(1601994..1602881) Burkholderia phytofirmans PsJN 6278208 YP_001889138.1 CDS Bphyt_5410 NC_010676.1 1602976 1603467 R PFAM: protein of unknown function DUF1486; KEGG: bxe:Bxe_B1198 hypothetical protein; hypothetical protein complement(1602976..1603467) Burkholderia phytofirmans PsJN 6277410 YP_001889139.1 CDS Bphyt_5411 NC_010676.1 1603591 1605156 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1197 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein complement(1603591..1605156) Burkholderia phytofirmans PsJN 6278427 YP_001889140.1 CDS Bphyt_5412 NC_010676.1 1605251 1606144 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1196 transcriptional regulator, LysR family; LysR family transcriptional regulator 1605251..1606144 Burkholderia phytofirmans PsJN 6277454 YP_001889141.1 CDS Bphyt_5413 NC_010676.1 1606296 1607723 R PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: bxe:Bxe_B1188 hypothetical protein; nicotinate phosphoribosyltransferase complement(1606296..1607723) Burkholderia phytofirmans PsJN 6278723 YP_001889142.1 CDS Bphyt_5414 NC_010676.1 1607806 1608543 R PFAM: Isoprenylcysteine carboxyl methyltransferase; protein of unknown function DUF1295; KEGG: bte:BTH_II1380 hypothetical protein; isoprenylcysteine carboxyl methyltransferase complement(1607806..1608543) Burkholderia phytofirmans PsJN 6278389 YP_001889143.1 CDS Bphyt_5415 NC_010676.1 1608707 1609909 R KEGG: bxe:Bxe_B1187 putative pilus assembly protein CpaE; pilus assembly protein CpaE complement(1608707..1609909) Burkholderia phytofirmans PsJN 6277634 YP_001889144.1 CDS Bphyt_5416 NC_010676.1 1609977 1610264 R KEGG: bxe:Bxe_B1186 hypothetical protein; hypothetical protein complement(1609977..1610264) Burkholderia phytofirmans PsJN 6278816 YP_001889145.1 CDS Bphyt_5417 NC_010676.1 1611613 1613049 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bxe:Bxe_B1183 sigma54 specific transcriptional regulator, fis family; Fis family sigma-54 specific transcriptional regulator 1611613..1613049 Burkholderia phytofirmans PsJN 6280444 YP_001889146.1 CDS Bphyt_5418 NC_010676.1 1613277 1615028 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B0288 MFS transporter, DHA2 family; EmrB/QacA subfamily drug resistance transporter 1613277..1615028 Burkholderia phytofirmans PsJN 6278856 YP_001889147.1 CDS Bphyt_5419 NC_010676.1 1615169 1615519 D PFAM: NIPSNAP family containing protein; KEGG: bxe:Bxe_B1182 hypothetical protein; NIPSNAP family containing protein 1615169..1615519 Burkholderia phytofirmans PsJN 6277572 YP_001889148.1 CDS Bphyt_5420 NC_010676.1 1615872 1618541 D PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_B1181 hypothetical protein; mechanosensitive ion channel protein MscS 1615872..1618541 Burkholderia phytofirmans PsJN 6278732 YP_001889149.1 CDS Bphyt_5421 NC_010676.1 1618665 1620929 R PFAM: DEAD_2 domain protein; SMART: Helicase-like, DEXD box c2 type; helicase c2; KEGG: bxe:Bxe_B1180 hypothetical protein; DEAD/DEAH box helicase complement(1618665..1620929) Burkholderia phytofirmans PsJN 6278570 YP_001889150.1 CDS Bphyt_5422 NC_010676.1 1620926 1622836 R PFAM: VRR-NUC domain protein; KEGG: bxe:Bxe_B1179 hypothetical protein; VRR-NUC domain-containing protein complement(1620926..1622836) Burkholderia phytofirmans PsJN 6278752 YP_001889151.1 CDS Bphyt_5423 NC_010676.1 1622920 1623807 R PFAM: beta-lactamase domain protein; KEGG: mbn:Mboo_1080 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(1622920..1623807) Burkholderia phytofirmans PsJN 6279280 YP_001889152.1 CDS Bphyt_5424 NC_010676.1 1623963 1625378 R PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_C6128 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1623963..1625378) Burkholderia phytofirmans PsJN 6279683 YP_001889153.1 CDS Bphyt_5425 NC_010676.1 1625416 1626429 R PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: reu:Reut_C6127 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase complement(1625416..1626429) Burkholderia phytofirmans PsJN 6278174 YP_001889154.1 CDS Bphyt_5426 NC_010676.1 1626585 1627469 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_C6126 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator complement(1626585..1627469) Burkholderia phytofirmans PsJN 6278149 YP_001889155.1 CDS Bphyt_5427 NC_010676.1 1627543 1628130 R PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_B1178 hypothetical protein; hypothetical protein complement(1627543..1628130) Burkholderia phytofirmans PsJN 6278646 YP_001889156.1 CDS Bphyt_5428 NC_010676.1 1628117 1629511 R PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_B1177 putative electron transport protein; hypothetical protein complement(1628117..1629511) Burkholderia phytofirmans PsJN 6278722 YP_001889157.1 CDS Bphyt_5429 NC_010676.1 1629508 1630278 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_B1176 putative oxidoreductase; hypothetical protein complement(1629508..1630278) Burkholderia phytofirmans PsJN 6280034 YP_001889158.1 CDS Bphyt_5430 NC_010676.1 1630489 1631808 R TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bpa:BPP2765 hypothetical protein; HipA N-terminal domain-containing protein complement(1630489..1631808) Burkholderia phytofirmans PsJN 6278022 YP_001889159.1 CDS Bphyt_5431 NC_010676.1 1631812 1632144 R PFAM: helix-turn-helix domain protein; KEGG: pmy:Pmen_4031 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(1631812..1632144) Burkholderia phytofirmans PsJN 6278089 YP_001889160.1 CDS Bphyt_5432 NC_010676.1 1632521 1633267 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B1175 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(1632521..1633267) Burkholderia phytofirmans PsJN 6277770 YP_001889161.1 CDS Bphyt_5433 NC_010676.1 1633451 1635223 R PFAM: peptidase S10 serine carboxypeptidase; KEGG: bxe:Bxe_B1174 putative carboxypeptidase-related protein; peptidase S10 serine carboxypeptidase complement(1633451..1635223) Burkholderia phytofirmans PsJN 6279885 YP_001889162.1 CDS Bphyt_5434 NC_010676.1 1635411 1636589 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; KEGG: bxe:Bxe_B1173 putative aspartate transaminase; class I/II aminotransferase complement(1635411..1636589) Burkholderia phytofirmans PsJN 6280337 YP_001889163.1 CDS Bphyt_5435 NC_010676.1 1636727 1638208 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(1636727..1638208) Burkholderia phytofirmans PsJN 6278281 YP_001889164.1 CDS Bphyt_5436 NC_010676.1 1638721 1639062 D PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bxe:Bxe_B1170 phospholipid binding protein; transport-associated protein 1638721..1639062 Burkholderia phytofirmans PsJN 6277709 YP_001889165.1 CDS Bphyt_5437 NC_010676.1 1639269 1639721 R PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_B1169 hypothetical protein; hypothetical protein complement(1639269..1639721) Burkholderia phytofirmans PsJN 6279073 YP_001889166.1 CDS Bphyt_5438 NC_010676.1 1640093 1640335 D KEGG: bxe:Bxe_B1168 hypothetical protein; hypothetical protein 1640093..1640335 Burkholderia phytofirmans PsJN 6278536 YP_001889167.1 CDS Bphyt_5439 NC_010676.1 1640455 1641036 R KEGG: bxe:Bxe_B1167 hypothetical protein; hypothetical protein complement(1640455..1641036) Burkholderia phytofirmans PsJN 6280240 YP_001889168.1 CDS Bphyt_5440 NC_010676.1 1641129 1641473 R KEGG: bxe:Bxe_B1166 hypothetical protein; hypothetical protein complement(1641129..1641473) Burkholderia phytofirmans PsJN 6277757 YP_001889169.1 CDS Bphyt_5441 NC_010676.1 1641470 1642033 R KEGG: bxe:Bxe_B1165 hypothetical protein; hypothetical protein complement(1641470..1642033) Burkholderia phytofirmans PsJN 6279347 YP_001889170.1 CDS Bphyt_5442 NC_010676.1 1642128 1642679 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1164 peptidase C56, PfpI; Pfpi family intracellular protease complement(1642128..1642679) Burkholderia phytofirmans PsJN 6278034 YP_001889171.1 CDS Bphyt_5443 NC_010676.1 1642812 1643153 R KEGG: bxe:Bxe_B1163 hypothetical protein; hypothetical protein complement(1642812..1643153) Burkholderia phytofirmans PsJN 6278766 YP_001889172.1 CDS Bphyt_5444 NC_010676.1 1643363 1644682 D KEGG: bxe:Bxe_B1162 putative DNA topoisomerase, type I; DNA topoisomerase 1643363..1644682 Burkholderia phytofirmans PsJN 6278019 YP_001889173.1 CDS Bphyt_5445 NC_010676.1 1644773 1645066 R KEGG: bxe:Bxe_B1161 hypothetical protein; hypothetical protein complement(1644773..1645066) Burkholderia phytofirmans PsJN 6278720 YP_001889174.1 CDS Bphyt_5446 NC_010676.1 1645384 1645911 D PFAM: PRC-barrel domain protein; KEGG: bxe:Bxe_B1160 hypothetical protein; PRC-barrel domain-containing protein 1645384..1645911 Burkholderia phytofirmans PsJN 6278015 YP_001889175.1 CDS Bphyt_5447 NC_010676.1 1646074 1646463 D KEGG: bxe:Bxe_B1159 hypothetical protein; hypothetical protein 1646074..1646463 Burkholderia phytofirmans PsJN 6278514 YP_001889176.1 CDS Bphyt_5448 NC_010676.1 1646549 1647874 D PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_B1158 putative Na+/H+ antiporter, CPA1 family; sodium/hydrogen exchanger 1646549..1647874 Burkholderia phytofirmans PsJN 6278017 YP_001889177.1 CDS Bphyt_5449 NC_010676.1 1647941 1648510 D KEGG: bxe:Bxe_B1157 hypothetical protein; hypothetical protein 1647941..1648510 Burkholderia phytofirmans PsJN 6280348 YP_001889178.1 CDS Bphyt_5450 NC_010676.1 1648507 1649478 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1156 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1648507..1649478) Burkholderia phytofirmans PsJN 6277713 YP_001889179.1 CDS Bphyt_5451 NC_010676.1 1649595 1649948 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B1155 alkylhydroperoxidase AhpD core; AhpD family alkylhydroperoxidase like protein 1649595..1649948 Burkholderia phytofirmans PsJN 6277787 YP_001889180.1 CDS Bphyt_5452 NC_010676.1 1650028 1651080 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B1154 oxidoreductase; aldo/keto reductase complement(1650028..1651080) Burkholderia phytofirmans PsJN 6278213 YP_001889181.1 CDS Bphyt_5453 NC_010676.1 1651285 1655799 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_B1153 ATP-dependent helicase, DEAD/DEAH family; DEAD/DEAH box helicase 1651285..1655799 Burkholderia phytofirmans PsJN 6278317 YP_001889182.1 CDS Bphyt_5454 NC_010676.1 1655961 1658030 D c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; RNase II stability modulator 1655961..1658030 Burkholderia phytofirmans PsJN 6279410 YP_001889183.1 CDS Bphyt_5455 NC_010676.1 1658118 1659002 R regulator of pathogenicity factor RpfF; involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes; enoyl-CoA hydratase complement(1658118..1659002) Burkholderia phytofirmans PsJN 6279913 YP_001889184.1 CDS Bphyt_5456 NC_010676.1 1659438 1660541 R PFAM: Malate/L-lactate dehydrogenase; KEGG: bcm:Bcenmc03_5376 malate/L-lactate dehydrogenase; hypothetical protein complement(1659438..1660541) Burkholderia phytofirmans PsJN 6279964 YP_001889185.1 CDS Bphyt_5457 NC_010676.1 1660597 1662057 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bxe:Bxe_B1150 putative peptidase; peptidase M20 complement(1660597..1662057) Burkholderia phytofirmans PsJN 6278215 YP_001889186.1 CDS Bphyt_5458 NC_010676.1 1662280 1662591 D KEGG: bxe:Bxe_B1149 hypothetical protein; hypothetical protein 1662280..1662591 Burkholderia phytofirmans PsJN 6278162 YP_001889187.1 CDS Bphyt_5459 NC_010676.1 1662664 1662936 R KEGG: bxe:Bxe_B1148 hypothetical protein; hypothetical protein complement(1662664..1662936) Burkholderia phytofirmans PsJN 6279665 YP_001889188.1 CDS Bphyt_5460 NC_010676.1 1663767 1666664 D PFAM: heat-labile enterotoxin A chain; KEGG: bxe:Bxe_B2202 hypothetical protein; heat-labile enterotoxin A chain 1663767..1666664 Burkholderia phytofirmans PsJN 6278699 YP_001889189.1 CDS Bphyt_5461 NC_010676.1 1666877 1667074 D hypothetical protein 1666877..1667074 Burkholderia phytofirmans PsJN 6279524 YP_001889190.1 CDS Bphyt_5462 NC_010676.1 1667068 1668654 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1147 major facilitator superfamily (MFS) drug efflux pump; major facilitator superfamily protein complement(1667068..1668654) Burkholderia phytofirmans PsJN 6278561 YP_001889191.1 CDS Bphyt_5463 NC_010676.1 1668685 1669323 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B1146 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1668685..1669323) Burkholderia phytofirmans PsJN 6278194 YP_001889192.1 CDS Bphyt_5464 NC_010676.1 1669513 1670625 D PFAM: Patatin; KEGG: bja:bll7964 hypothetical protein; patatin 1669513..1670625 Burkholderia phytofirmans PsJN 6279382 YP_001889193.1 CDS Bphyt_5465 NC_010676.1 1670817 1671242 R PFAM: OsmC family protein; KEGG: bxe:Bxe_B1145 putative OsmC-like protein; OsmC family protein complement(1670817..1671242) Burkholderia phytofirmans PsJN 6278335 YP_001889194.1 CDS Bphyt_5466 NC_010676.1 1671592 1671900 D KEGG: bxe:Bxe_B1144 hypothetical protein; hypothetical protein 1671592..1671900 Burkholderia phytofirmans PsJN 6279676 YP_001889195.1 CDS Bphyt_5467 NC_010676.1 1672160 1672714 R PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B1143 hypothetical protein; carboxymuconolactone decarboxylase complement(1672160..1672714) Burkholderia phytofirmans PsJN 6277895 YP_001889196.1 CDS Bphyt_5468 NC_010676.1 1672747 1674075 R PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B1142 hypothetical protein; hypothetical protein complement(1672747..1674075) Burkholderia phytofirmans PsJN 6279730 YP_001889197.1 CDS Bphyt_5469 NC_010676.1 1674349 1675203 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_B1140 transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(1674349..1675203) Burkholderia phytofirmans PsJN 6279707 YP_001889198.1 CDS Bphyt_5470 NC_010676.1 1675383 1676084 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_1229 GntR domain protein; GntR family transcriptional regulator complement(1675383..1676084) Burkholderia phytofirmans PsJN 6280495 YP_001889199.1 CDS Bphyt_5471 NC_010676.1 1676326 1677888 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_1228 ABC transporter related; ABC transporter-like protein 1676326..1677888 Burkholderia phytofirmans PsJN 6280372 YP_001889200.1 CDS Bphyt_5472 NC_010676.1 1677881 1678912 D PFAM: inner-membrane translocator; KEGG: bam:Bamb_1227 inner-membrane translocator; monosaccharide-transporting ATPase 1677881..1678912 Burkholderia phytofirmans PsJN 6279359 YP_001889201.1 CDS Bphyt_5473 NC_010676.1 1678952 1679899 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bam:Bamb_1226 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 1678952..1679899 Burkholderia phytofirmans PsJN 6278154 YP_001889202.1 CDS Bphyt_5474 NC_010676.1 1680013 1680984 D PFAM: aldo/keto reductase; KEGG: bam:Bamb_1225 aldo/keto reductase; pyridoxal 4-dehydrogenase 1680013..1680984 Burkholderia phytofirmans PsJN 6279781 YP_001889203.1 CDS Bphyt_5475 NC_010676.1 1680981 1681853 D PFAM: amidohydrolase 2; KEGG: bam:Bamb_1224 amidohydrolase 2; amidohydrolase 2 1680981..1681853 Burkholderia phytofirmans PsJN 6278074 YP_001889204.1 CDS Bphyt_5476 NC_010676.1 1681867 1682874 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bam:Bamb_1223 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase GroES domain-containing protein 1681867..1682874 Burkholderia phytofirmans PsJN 6279717 YP_001889205.1 CDS Bphyt_5477 NC_010676.1 1682902 1684062 D PFAM: Mannitol dehydrogenase domain; KEGG: bam:Bamb_1222 mannitol dehydrogenase, C-terminal domain; mannitol dehydrogenase domain 1682902..1684062 Burkholderia phytofirmans PsJN 6279823 YP_001889206.1 CDS Bphyt_5478 NC_010676.1 1684059 1685585 D PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: bam:Bamb_1221 altronate dehydratase; altronate dehydratase 1684059..1685585 Burkholderia phytofirmans PsJN 6279834 YP_001889207.1 CDS Bphyt_5479 NC_010676.1 1685669 1685974 D KEGG: bam:Bamb_1220 hypothetical protein; hypothetical protein 1685669..1685974 Burkholderia phytofirmans PsJN 6278288 YP_001889208.1 CDS Bphyt_5480 NC_010676.1 1686022 1686363 D PFAM: protein of unknown function DUF718; KEGG: bam:Bamb_1219 hypothetical protein; hypothetical protein 1686022..1686363 Burkholderia phytofirmans PsJN 6278833 YP_001889209.1 CDS Bphyt_5481 NC_010676.1 1686550 1686906 R KEGG: lic:LIC10630 hypothetical protein; hypothetical protein complement(1686550..1686906) Burkholderia phytofirmans PsJN 6278212 YP_001889210.1 CDS Bphyt_5482 NC_010676.1 1686995 1688209 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mca:MCA0639 NADH-dependent flavin oxidoreductase, Oye family; NADH:flavin oxidoreductase complement(1686995..1688209) Burkholderia phytofirmans PsJN 6278329 YP_001889211.1 CDS Bphyt_5483 NC_010676.1 1688483 1688725 R KEGG: reu:Reut_A2224 hypothetical protein; hypothetical protein complement(1688483..1688725) Burkholderia phytofirmans PsJN 6279091 YP_001889212.1 CDS Bphyt_5484 NC_010676.1 1688880 1689518 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bte:BTH_I2869 YhfK-like protein; NAD-dependent epimerase/dehydratase complement(1688880..1689518) Burkholderia phytofirmans PsJN 6279693 YP_001889213.1 CDS Bphyt_5485 NC_010676.1 1689621 1689788 R KEGG: reu:Reut_B4060 hypothetical protein; hypothetical protein complement(1689621..1689788) Burkholderia phytofirmans PsJN 6278933 YP_001889214.1 CDS Bphyt_5486 NC_010676.1 1690075 1690605 R PFAM: membrane protein of uknown function UCP014873; KEGG: atc:AGR_C_2272 hypothetical protein; hypothetical protein complement(1690075..1690605) Burkholderia phytofirmans PsJN 6279150 YP_001889215.1 CDS Bphyt_5487 NC_010676.1 1690901 1691728 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reu:Reut_C5912 helix-turn-helix, AraC type; AraC family transcriptional regulator complement(1690901..1691728) Burkholderia phytofirmans PsJN 6279846 YP_001889216.1 CDS Bphyt_5489 NC_010676.1 1692418 1692852 R KEGG: bxe:Bxe_B2373 hypothetical protein; hypothetical protein complement(1692418..1692852) Burkholderia phytofirmans PsJN 6278364 YP_001889217.1 CDS Bphyt_5490 NC_010676.1 1693148 1693723 D KEGG: reu:Reut_C5913 hypothetical protein; hypothetical protein 1693148..1693723 Burkholderia phytofirmans PsJN 6278005 YP_001889218.1 CDS Bphyt_5491 NC_010676.1 1693918 1694553 D PFAM: heat shock protein Hsp20; KEGG: bxe:Bxe_A2578 putative heat shock protein; heat shock protein Hsp20 1693918..1694553 Burkholderia phytofirmans PsJN 6279595 YP_001889219.1 CDS Bphyt_5492 NC_010676.1 1694777 1697611 D PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: reu:Reut_C5916 AAA ATPase, central region:Clp, N terminal; ATPase AAA-2 domain-containing protein 1694777..1697611 Burkholderia phytofirmans PsJN 6278156 YP_001889220.1 CDS Bphyt_5493 NC_010676.1 1697664 1697936 R PFAM: zinc finger UBP-type protein; KEGG: bur:Bcep18194_A4964 hypothetical protein; zinc finger UBP-type protein complement(1697664..1697936) Burkholderia phytofirmans PsJN 6279012 YP_001889221.1 CDS Bphyt_5494 NC_010676.1 1697995 1699236 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bch:Bcen2424_6359 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin-disulfide reductase complement(1697995..1699236) Burkholderia phytofirmans PsJN 6278449 YP_001889222.1 CDS Bphyt_5495 NC_010676.1 1700207 1700773 D KEGG: reu:Reut_C5911 hypothetical protein; hypothetical protein 1700207..1700773 Burkholderia phytofirmans PsJN 6278911 YP_001889223.1 CDS Bphyt_5497 NC_010676.1 1701021 1701809 R PFAM: protein of unknown function UPF0153; KEGG: bvi:Bcep1808_5052 protein of unknown function UPF0153; hypothetical protein complement(1701021..1701809) Burkholderia phytofirmans PsJN 6280083 YP_001889224.1 CDS Bphyt_5498 NC_010676.1 1702148 1702495 R KEGG: azo:azo0016 hypothetical protein; hypothetical protein complement(1702148..1702495) Burkholderia phytofirmans PsJN 6277797 YP_001889225.1 CDS Bphyt_5499 NC_010676.1 1702941 1703861 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2390 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1702941..1703861) Burkholderia phytofirmans PsJN 6278421 YP_001889226.1 CDS Bphyt_5500 NC_010676.1 1703980 1704633 D PFAM: DSBA oxidoreductase; KEGG: bxe:Bxe_B2391 putative DsbA oxidoreductase; DSBA oxidoreductase 1703980..1704633 Burkholderia phytofirmans PsJN 6279956 YP_001889227.1 CDS Bphyt_5501 NC_010676.1 1704630 1705697 D KEGG: bxe:Bxe_B2392 hypothetical protein; hypothetical protein 1704630..1705697 Burkholderia phytofirmans PsJN 6279689 YP_001889228.1 CDS Bphyt_5502 NC_010676.1 1705835 1707001 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2393 major facilitator superfamily (MFS) efflux pump; major facilitator superfamily protein 1705835..1707001 Burkholderia phytofirmans PsJN 6277949 YP_001889229.1 CDS Bphyt_5503 NC_010676.1 1707200 1707388 D KEGG: bur:Bcep18194_A4953 NADH-flavin oxidoreductase/NADH oxidase; hypothetical protein 1707200..1707388 Burkholderia phytofirmans PsJN 6279685 YP_001889230.1 CDS Bphyt_5504 NC_010676.1 1707461 1708738 D PFAM: cytochrome c class I; KEGG: bch:Bcen2424_6358 cytochrome c, class I; gluconate 2-dehydrogenase 1707461..1708738 Burkholderia phytofirmans PsJN 6279590 YP_001889231.1 CDS Bphyt_5505 NC_010676.1 1708735 1709247 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bvi:Bcep1808_6385 (2Fe-2S)-binding domain protein; (2Fe-2S)-binding domain-containing protein 1708735..1709247 Burkholderia phytofirmans PsJN 6280500 YP_001889232.1 CDS Bphyt_5506 NC_010676.1 1709244 1711508 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bam:Bamb_5820 putative aldehyde dehydrogenase; acylaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 1709244..1711508 Burkholderia phytofirmans PsJN 6279546 YP_001889233.1 CDS Bphyt_5507 NC_010676.1 1711693 1712598 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_4757 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1711693..1712598) Burkholderia phytofirmans PsJN 6278350 YP_001889234.1 CDS Bphyt_5508 NC_010676.1 1712694 1713665 D KEGG: bvi:Bcep1808_4756 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 1712694..1713665 Burkholderia phytofirmans PsJN 6279944 YP_001889235.1 CDS Bphyt_5509 NC_010676.1 1713662 1714054 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bvi:Bcep1808_4755 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1713662..1714054 Burkholderia phytofirmans PsJN 6279991 YP_001889236.1 CDS Bphyt_5510 NC_010676.1 1714056 1714514 D PFAM: MaoC domain protein dehydratase; KEGG: bvi:Bcep1808_4754 MaoC domain protein dehydratase; MaoC domain-containing protein dehydratase 1714056..1714514 Burkholderia phytofirmans PsJN 6278443 YP_001889237.1 CDS Bphyt_5511 NC_010676.1 1714514 1715734 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bcm:Bcenmc03_6404 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1714514..1715734 Burkholderia phytofirmans PsJN 6279346 YP_001889238.1 CDS Bphyt_5512 NC_010676.1 1715734 1716567 D TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: bvi:Bcep1808_4752 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 1715734..1716567 Burkholderia phytofirmans PsJN 6280413 YP_001889239.1 CDS Bphyt_5514 NC_010676.1 1716884 1718365 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bam:Bamb_6345 diguanylate cyclase; diguanylate cyclase 1716884..1718365 Burkholderia phytofirmans PsJN 6279500 YP_001889240.1 CDS Bphyt_5515 NC_010676.1 1718647 1719708 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rfr:Rfer_2439 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase GroES domain-containing protein 1718647..1719708 Burkholderia phytofirmans PsJN 6279759 YP_001889241.1 CDS Bphyt_5516 NC_010676.1 1719734 1720636 D PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_6669 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1719734..1720636 Burkholderia phytofirmans PsJN 6279040 YP_001889242.1 CDS Bphyt_5517 NC_010676.1 1720705 1722030 D PFAM: FAD dependent oxidoreductase; KEGG: rle:pRL120605 putative amino acid deaminase; FAD dependent oxidoreductase 1720705..1722030 Burkholderia phytofirmans PsJN 6278299 YP_001889243.1 CDS Bphyt_5518 NC_010676.1 1722101 1723558 D PFAM: Aldehyde Dehydrogenase_; KEGG: bcm:Bcenmc03_6269 aldehyde dehydrogenase; aldehyde dehydrogenase 1722101..1723558 Burkholderia phytofirmans PsJN 6279724 YP_001889244.1 CDS Bphyt_5519 NC_010676.1 1723627 1724817 D KEGG: bch:Bcen2424_6670 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1723627..1724817 Burkholderia phytofirmans PsJN 6279756 YP_001889245.1 CDS Bphyt_5520 NC_010676.1 1724939 1726237 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4980 metabolite/H+ symporter, major facilitator superfamily (MFS); major facilitator superfamily metabolite/H+ symporter 1724939..1726237 Burkholderia phytofirmans PsJN 6277854 YP_001889246.1 CDS Bphyt_5521 NC_010676.1 1726293 1727075 D PFAM: extracellular solute-binding protein family 1; KEGG: bcm:Bcenmc03_6262 extracellular solute-binding protein family 1; family 1 extracellular solute-binding protein 1726293..1727075 Burkholderia phytofirmans PsJN 6280554 YP_001889247.1 CDS Bphyt_5522 NC_010676.1 1727116 1728417 R PFAM: sodium:dicarboxylate symporter; KEGG: bam:Bamb_5625 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter complement(1727116..1728417) Burkholderia phytofirmans PsJN 6277811 YP_001889248.1 CDS Bphyt_5523 NC_010676.1 1728414 1729382 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5626 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1728414..1729382) Burkholderia phytofirmans PsJN 6278485 YP_001889249.1 CDS Bphyt_5524 NC_010676.1 1729677 1731950 R PFAM: Amylo-alpha-16-glucosidase; KEGG: bxe:Bxe_B1135 hypothetical protein; amylo-alpha-16-glucosidase complement(1729677..1731950) Burkholderia phytofirmans PsJN 6280343 YP_001889250.1 CDS gltA NC_010676.1 1732162 1733460 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(1732162..1733460) Burkholderia phytofirmans PsJN 6280417 YP_001889251.1 CDS Bphyt_5526 NC_010676.1 1733871 1734272 D KEGG: bxe:Bxe_B1133 hypothetical protein; hypothetical protein 1733871..1734272 Burkholderia phytofirmans PsJN 6280161 YP_001889252.1 CDS Bphyt_5527 NC_010676.1 1734393 1735316 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B1132 putative hydrolase; alpha/beta fold family hydrolase complement(1734393..1735316) Burkholderia phytofirmans PsJN 6279561 YP_001889253.1 CDS Bphyt_5528 NC_010676.1 1735489 1736541 R TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: bxe:Bxe_B1131 cell shape determining protein MreB/Mrl; rod shape-determining protein MreB complement(1735489..1736541) Burkholderia phytofirmans PsJN 6278801 YP_001889254.1 CDS Bphyt_5529 NC_010676.1 1736742 1737401 R PFAM: phospholipase/Carboxylesterase; KEGG: bxe:Bxe_B1130 putative hydrolase YpfH; phospholipase/carboxylesterase complement(1736742..1737401) Burkholderia phytofirmans PsJN 6277842 YP_001889255.1 CDS Bphyt_5530 NC_010676.1 1737626 1739257 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1129 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 1737626..1739257 Burkholderia phytofirmans PsJN 6280082 YP_001889256.1 CDS Bphyt_5531 NC_010676.1 1739322 1740071 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bxe:Bxe_B1128 putative transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1739322..1740071) Burkholderia phytofirmans PsJN 6278775 YP_001889257.1 CDS Bphyt_5532 NC_010676.1 1740242 1741156 D catalyzes the formation of glutamate from glutamine; glutaminase 1740242..1741156 Burkholderia phytofirmans PsJN 6279475 YP_001889258.1 CDS Bphyt_5533 NC_010676.1 1741243 1742253 R TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pmy:Pmen_3712 alcohol dehydrogenase, zinc-binding domain protein; zinc-binding alcohol dehydrogenase family protein complement(1741243..1742253) Burkholderia phytofirmans PsJN 6277834 YP_001889259.1 CDS Bphyt_5534 NC_010676.1 1742638 1743279 D KEGG: mrd:Mrad2831_5283 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1742638..1743279 Burkholderia phytofirmans PsJN 6277839 YP_001889260.1 CDS Bphyt_5535 NC_010676.1 1743573 1744748 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B0374 outer membrane porin, OmpC family; porin 1743573..1744748 Burkholderia phytofirmans PsJN 6278132 YP_001889261.1 CDS Bphyt_5536 NC_010676.1 1745154 1745465 R KEGG: bxe:Bxe_B2612 aromatic acid exporter, ArAE family; ArAE family aromatic acid exporter complement(1745154..1745465) Burkholderia phytofirmans PsJN 6278812 YP_001889262.1 CDS Bphyt_5537 NC_010676.1 1746026 1746736 D KEGG: rfr:Rfer_0492 ATPase, E1-E2 type; hypothetical protein 1746026..1746736 Burkholderia phytofirmans PsJN 6278817 YP_001889263.1 CDS Bphyt_5538 NC_010676.1 1746744 1747760 R KEGG: bcn:Bcen_5269 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator complement(1746744..1747760) Burkholderia phytofirmans PsJN 6280176 YP_001889264.1 CDS Bphyt_5539 NC_010676.1 1747928 1748290 D KEGG: bcm:Bcenmc03_1679 hypothetical protein; hypothetical protein 1747928..1748290 Burkholderia phytofirmans PsJN 6280474 YP_001889265.1 CDS Bphyt_5540 NC_010676.1 1748374 1748565 D hypothetical protein 1748374..1748565 Burkholderia phytofirmans PsJN 6280020 YP_001889266.1 CDS Bphyt_5541 NC_010676.1 1748586 1748849 D KEGG: bxe:Bxe_A2404 putative insertion element transposase; insertion element transposase 1748586..1748849 Burkholderia phytofirmans PsJN 6278480 YP_001889267.1 CDS Bphyt_5542 NC_010676.1 1749254 1749913 D PFAM: LemA family protein; KEGG: bmn:BMA10247_2232 LemA family protein; LemA family protein 1749254..1749913 Burkholderia phytofirmans PsJN 6277723 YP_001889268.1 CDS Bphyt_5543 NC_010676.1 1750134 1750703 D PFAM: Lipocalin family protein; KEGG: bxe:Bxe_A1894 putative outer membrane lipoprotein, lipocalin Blc like; lipocalin family protein 1750134..1750703 Burkholderia phytofirmans PsJN 6277808 YP_001889269.1 CDS Bphyt_5544 NC_010676.1 1750778 1751428 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bxe:Bxe_A1892 putative phophoslipid binding protein; transport-associated protein complement(1750778..1751428) Burkholderia phytofirmans PsJN 6279656 YP_001889270.1 CDS Bphyt_5545 NC_010676.1 1752196 1752678 R TIGRFAM: phasin family protein; KEGG: bxe:Bxe_A1874 phasin; phasin family protein complement(1752196..1752678) Burkholderia phytofirmans PsJN 6279380 YP_001889271.1 CDS Bphyt_5546 NC_010676.1 1752723 1753415 R PFAM: CBS domain containing protein; KEGG: bxe:Bxe_A1873 hypothetical protein; hypothetical protein complement(1752723..1753415) Burkholderia phytofirmans PsJN 6280435 YP_001889272.1 CDS Bphyt_5548 NC_010676.1 1755154 1755750 D PFAM: Rhomboid family protein; KEGG: bte:BTH_II1299 serine protease, rhomboid family; rhomboid family protein 1755154..1755750 Burkholderia phytofirmans PsJN 6280522 YP_001889273.1 CDS Bphyt_5549 NC_010676.1 1756016 1757128 R KEGG: bxe:Bxe_A3924 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(1756016..1757128) Burkholderia phytofirmans PsJN 6278867 YP_001889274.1 CDS Bphyt_5550 NC_010676.1 1757425 1757904 R KEGG: bmu:Bmul_5872 hypothetical protein; hypothetical protein complement(1757425..1757904) Burkholderia phytofirmans PsJN 6278718 YP_001889275.1 CDS Bphyt_5551 NC_010676.1 1758543 1759040 R PFAM: UspA domain protein; KEGG: bxe:Bxe_A1888 putative universal stress protein; UspA domain-containing protein complement(1758543..1759040) Burkholderia phytofirmans PsJN 6278248 YP_001889276.1 CDS Bphyt_5552 NC_010676.1 1759233 1760081 R PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: bxe:Bxe_A1886 H+-transporting two-sector ATPase, gamma subunit; H+transporting two-sector ATPase subunit gamma complement(1759233..1760081) Burkholderia phytofirmans PsJN 6278547 YP_001889277.1 CDS Bphyt_5553 NC_010676.1 1760078 1761646 R produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(1760078..1761646) Burkholderia phytofirmans PsJN 6277706 YP_001889278.1 CDS Bphyt_5554 NC_010676.1 1761633 1762382 R KEGG: bxe:Bxe_A1884 H+-transporting two-sector ATPase, B/B' subunit; H+-transporting two-sector ATPase subunit B/B' complement(1761633..1762382) Burkholderia phytofirmans PsJN 6279391 YP_001889279.1 CDS Bphyt_5555 NC_010676.1 1762392 1762640 R produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(1762392..1762640) Burkholderia phytofirmans PsJN 6277905 YP_001889280.1 CDS Bphyt_5556 NC_010676.1 1762637 1763335 R produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(1762637..1763335) Burkholderia phytofirmans PsJN 6280440 YP_001889281.1 CDS Bphyt_5557 NC_010676.1 1763332 1763613 R KEGG: bpd:BURPS668_A2791 hypothetical protein; hypothetical protein complement(1763332..1763613) Burkholderia phytofirmans PsJN 6280237 YP_001889282.1 CDS Bphyt_5558 NC_010676.1 1763606 1763923 R TIGRFAM: F0F1-ATPase subunit; PFAM: F0F1-ATPase subunit putative; KEGG: bxe:Bxe_A1881 putative H(+)-transporting ATP synthase, gene 1 protein; F0F1-ATPase subunit complement(1763606..1763923) Burkholderia phytofirmans PsJN 6280289 YP_001889283.1 CDS Bphyt_5559 NC_010676.1 1763920 1764378 R produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon complement(1763920..1764378) Burkholderia phytofirmans PsJN 6279970 YP_001889284.1 CDS Bphyt_5560 NC_010676.1 1764375 1765853 R produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(1764375..1765853) Burkholderia phytofirmans PsJN 6280154 YP_001889285.1 CDS Bphyt_5561 NC_010676.1 1766226 1766504 R KEGG: bxe:Bxe_A1871 hypothetical protein; hypothetical protein complement(1766226..1766504) Burkholderia phytofirmans PsJN 6279745 YP_001889286.1 CDS Bphyt_5562 NC_010676.1 1766577 1767227 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: bxe:Bxe_A1870 periplasmic phospholipid binding protein; transport-associated protein complement(1766577..1767227) Burkholderia phytofirmans PsJN 6280488 YP_001889287.1 CDS Bphyt_5564 NC_010676.1 1767832 1768872 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_A1860 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase GroES domain-containing protein complement(1767832..1768872) Burkholderia phytofirmans PsJN 6277674 YP_001889288.1 CDS Bphyt_5566 NC_010676.1 1769304 1770050 R TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpl:BURPS1106A_A2601 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase complement(1769304..1770050) Burkholderia phytofirmans PsJN 6277701 YP_001889289.1 CDS Bphyt_5567 NC_010676.1 1770518 1770976 R PFAM: UspA domain protein; KEGG: bxe:Bxe_A1859 putative universal stress protein; UspA domain-containing protein complement(1770518..1770976) Burkholderia phytofirmans PsJN 6277903 YP_001889290.1 CDS Bphyt_5568 NC_010676.1 1771035 1771382 R KEGG: bxe:Bxe_A1858 hypothetical protein; hypothetical protein complement(1771035..1771382) Burkholderia phytofirmans PsJN 6279563 YP_001889291.1 CDS Bphyt_5570 NC_010676.1 1771819 1772652 R PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: bxe:Bxe_A1866 putative K+ ion channel; Ion transport 2 domain-containing protein complement(1771819..1772652) Burkholderia phytofirmans PsJN 6278499 YP_001889292.1 CDS Bphyt_5571 NC_010676.1 1772763 1773203 R KEGG: bxe:Bxe_A1865 hypothetical protein; hypothetical protein complement(1772763..1773203) Burkholderia phytofirmans PsJN 6278301 YP_001889293.1 CDS Bphyt_5572 NC_010676.1 1773226 1773738 R KEGG: bxe:Bxe_A1855 hypothetical protein; hypothetical protein complement(1773226..1773738) Burkholderia phytofirmans PsJN 6280468 YP_001889294.1 CDS Bphyt_5573 NC_010676.1 1774044 1774280 D KEGG: bur:Bcep18194_B1644 hypothetical protein; hypothetical protein 1774044..1774280 Burkholderia phytofirmans PsJN 6278946 YP_001889295.1 CDS Bphyt_5574 NC_010676.1 1774395 1775876 D TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; KEGG: bxe:Bxe_A1878 arginine/ornithine antiporter, APC superfamily; arginine/ornithine antiporter 1774395..1775876 Burkholderia phytofirmans PsJN 6280431 YP_001889296.1 CDS Bphyt_5575 NC_010676.1 1775902 1777119 D catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 1775902..1777119 Burkholderia phytofirmans PsJN 6280156 YP_001889297.1 CDS Bphyt_5576 NC_010676.1 1777157 1778155 D TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: bxe:Bxe_A1876 ornithine carbamoyltransferase; ornithine carbamoyltransferase 1777157..1778155 Burkholderia phytofirmans PsJN 6279092 YP_001889298.1 CDS Bphyt_5577 NC_010676.1 1778165 1779073 D reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 1778165..1779073 Burkholderia phytofirmans PsJN 6280151 YP_001889299.1 CDS Bphyt_5578 NC_010676.1 1779155 1780558 D PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: bxe:Bxe_B0357 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 1779155..1780558 Burkholderia phytofirmans PsJN 6279160 YP_001889300.1 CDS Bphyt_5579 NC_010676.1 1780718 1781554 D PFAM: UspA domain protein; KEGG: bxe:Bxe_A1854 hypothetical protein; UspA domain-containing protein 1780718..1781554 Burkholderia phytofirmans PsJN 6278250 YP_001889301.1 CDS Bphyt_5580 NC_010676.1 1781610 1782116 D PFAM: UspA domain protein; KEGG: bxe:Bxe_A1853 universal stress protein; UspA domain-containing protein 1781610..1782116 Burkholderia phytofirmans PsJN 6278339 YP_001889302.1 CDS Bphyt_5581 NC_010676.1 1782113 1782943 D PFAM: UspA domain protein; KEGG: bxe:Bxe_A1852 hypothetical protein; UspA domain-containing protein 1782113..1782943 Burkholderia phytofirmans PsJN 6278233 YP_001889303.1 CDS Bphyt_5582 NC_010676.1 1783117 1783593 R PFAM: UspA domain protein; KEGG: bmu:Bmul_4254 UspA domain protein; UspA domain-containing protein complement(1783117..1783593) Burkholderia phytofirmans PsJN 6278605 YP_001889304.1 CDS Bphyt_5583 NC_010676.1 1783832 1784050 D KEGG: bxe:Bxe_A1851 multi-sensor signal transduction histidine kinase; hypothetical protein 1783832..1784050 Burkholderia phytofirmans PsJN 6280136 YP_001889305.1 CDS Bphyt_5584 NC_010676.1 1784097 1784744 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bmu:Bmul_4256 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1784097..1784744 Burkholderia phytofirmans PsJN 6280371 YP_001889306.1 CDS Bphyt_5585 NC_010676.1 1784916 1785947 D KEGG: bxe:Bxe_A1864 hypothetical protein; hypothetical protein 1784916..1785947 Burkholderia phytofirmans PsJN 6278965 YP_001889307.1 CDS Bphyt_5586 NC_010676.1 1785985 1786260 R KEGG: bxe:Bxe_A1843 periplasmic protein of unknown function, DUF1488; hypothetical protein complement(1785985..1786260) Burkholderia phytofirmans PsJN 6278051 YP_001889308.1 CDS Bphyt_5587 NC_010676.1 1786558 1787229 D KEGG: bxe:Bxe_A1863 putative NADH oxidase (nitroreductase), NoxC-like; NADH oxidase (nitroreductase), NoxC-like protein 1786558..1787229 Burkholderia phytofirmans PsJN 6277819 YP_001889309.1 CDS Bphyt_5589 NC_010676.1 1787643 1789139 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bmu:Bmul_5889 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein complement(1787643..1789139) Burkholderia phytofirmans PsJN 6279580 YP_001889310.1 CDS Bphyt_5590 NC_010676.1 1789117 1790202 R PFAM: secretion protein HlyD family protein; KEGG: bmv:BMASAVP1_1319 auxiliary transport protein, membrane fusion protein (MFP) family; secretion protein HlyD family protein complement(1789117..1790202) Burkholderia phytofirmans PsJN 6278995 YP_001889311.1 CDS Bphyt_5591 NC_010676.1 1790199 1790897 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvi:Bcep1808_6321 ABC transporter related; ABC transporter-like protein complement(1790199..1790897) Burkholderia phytofirmans PsJN 6277732 YP_001889312.1 CDS Bphyt_5592 NC_010676.1 1790899 1792035 R PFAM: protein of unknown function DUF214; KEGG: bpd:BURPS668_A2769 ABC transporter, permease protein, putative; hypothetical protein complement(1790899..1792035) Burkholderia phytofirmans PsJN 6278057 YP_001889313.1 CDS Bphyt_5593 NC_010676.1 1792100 1792291 R KEGG: bxe:Bxe_A1839 conserved hypothetical protein, transmembrane; hypothetical protein complement(1792100..1792291) Burkholderia phytofirmans PsJN 6279801 YP_001889314.1 CDS Bphyt_5594 NC_010676.1 1792688 1794664 D TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A1862 putative acetyl-coenzyme A synthetase; acetate/CoA ligase 1792688..1794664 Burkholderia phytofirmans PsJN 6279691 YP_001889315.1 CDS Bphyt_5595 NC_010676.1 1794767 1795372 D PFAM: GPR1/FUN34/yaaH family protein; KEGG: bxe:Bxe_A1861 hypothetical protein; GPR1/FUN34/yaaH family protein 1794767..1795372 Burkholderia phytofirmans PsJN 6278396 YP_001889316.1 CDS Bphyt_5596 NC_010676.1 1795458 1797317 R PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: bmu:Bmul_5894 poly-beta-hydroxybutyrate polymerase domain protein; Poly-beta-hydroxybutyrate polymerase domain-containing protein complement(1795458..1797317) Burkholderia phytofirmans PsJN 6278403 YP_001889317.1 CDS Bphyt_5597 NC_010676.1 1797713 1798381 D KEGG: bvi:Bcep1808_6351 hypothetical protein; hypothetical protein 1797713..1798381 Burkholderia phytofirmans PsJN 6280060 YP_001889318.1 CDS Bphyt_5598 NC_010676.1 1798569 1799834 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bte:BTH_II2312 intracellular polyhydroxyalkanoate depolymerase; polyhydroxyalkanoate depolymerase 1798569..1799834 Burkholderia phytofirmans PsJN 6278501 YP_001889319.1 CDS Bphyt_5599 NC_010676.1 1799914 1801347 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: bpl:BURPS1106A_A2599 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1799914..1801347 Burkholderia phytofirmans PsJN 6277299 YP_001889320.1 CDS Bphyt_5600 NC_010676.1 1801498 1802529 D PFAM: nitroreductase; KEGG: bxe:Bxe_A1864 hypothetical protein; nitroreductase 1801498..1802529 Burkholderia phytofirmans PsJN 6280157 YP_001889321.1 CDS Bphyt_5601 NC_010676.1 1802616 1804364 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bmn:BMA10247_A2321 inorganic anion transporter, sulfate permease (SulP) family; sulfate transporter 1802616..1804364 Burkholderia phytofirmans PsJN 6280046 YP_001889322.1 CDS Bphyt_5602 NC_010676.1 1804574 1805005 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bxe:Bxe_B1027 hypothetical protein; hypothetical protein complement(1804574..1805005) Burkholderia phytofirmans PsJN 6279454 YP_001889323.1 CDS Bphyt_5603 NC_010676.1 1805007 1805441 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bxe:Bxe_B1026 putative transmembrane protein; hypothetical protein complement(1805007..1805441) Burkholderia phytofirmans PsJN 6279731 YP_001889324.1 CDS Bphyt_5604 NC_010676.1 1805580 1806533 R PFAM: UspA domain protein; KEGG: bxe:Bxe_A1890 putative universal stress protein, UspA-like; UspA domain-containing protein complement(1805580..1806533) Burkholderia phytofirmans PsJN 6278416 YP_001889325.1 CDS Bphyt_5605 NC_010676.1 1806661 1807734 D PFAM: polysaccharide deacetylase; KEGG: bmn:BMA10247_A2342 polysaccharide deacetylase family protein; polysaccharide deacetylase 1806661..1807734 Burkholderia phytofirmans PsJN 6280458 YP_001889326.1 CDS Bphyt_5606 NC_010676.1 1807734 1808990 D KEGG: bte:BTH_II2323 hypothetical protein; hypothetical protein 1807734..1808990 Burkholderia phytofirmans PsJN 6280125 YP_001889327.1 CDS Bphyt_5607 NC_010676.1 1808987 1811341 D PFAM: beta-lactamase; conserved hypothetical protein; KEGG: bte:BTH_II0925 beta-lactamase, putative; hypothetical protein 1808987..1811341 Burkholderia phytofirmans PsJN 6279415 YP_001889328.1 CDS Bphyt_5608 NC_010676.1 1811400 1811972 R KEGG: bvi:Bcep1808_6291 hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein complement(1811400..1811972) Burkholderia phytofirmans PsJN 6278392 YP_001889329.1 CDS Bphyt_5609 NC_010676.1 1811974 1812156 R hypothetical protein complement(1811974..1812156) Burkholderia phytofirmans PsJN 6278357 YP_001889330.1 CDS Bphyt_5610 NC_010676.1 1812511 1812882 R PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B0352 alkylhydroperoxidase AhpD core; carboxymuconolactone decarboxylase complement(1812511..1812882) Burkholderia phytofirmans PsJN 6277908 YP_001889331.1 CDS Bphyt_5611 NC_010676.1 1813241 1813861 R KEGG: bte:BTH_II1310 hypothetical protein; hypothetical protein complement(1813241..1813861) Burkholderia phytofirmans PsJN 6278355 YP_001889332.1 CDS Bphyt_5612 NC_010676.1 1813896 1816406 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bte:BTH_II1309 cation-transporting P-ATPase PacL; HAD superfamily P-type ATPase complement(1813896..1816406) Burkholderia phytofirmans PsJN 6280092 YP_001889333.1 CDS Bphyt_5613 NC_010676.1 1816461 1816946 R KEGG: bpd:BURPS668_A1556 hypothetical protein; hypothetical protein complement(1816461..1816946) Burkholderia phytofirmans PsJN 6277779 YP_001889334.1 CDS Bphyt_5614 NC_010676.1 1817207 1817686 D PFAM: CreA family protein; KEGG: bte:BTH_II0065 CreA protein, putative; CreA family protein 1817207..1817686 Burkholderia phytofirmans PsJN 6278345 YP_001889335.1 CDS Bphyt_5615 NC_010676.1 1818252 1821431 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: bxe:Bxe_B0966 putative diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC sensor(s); PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase 1818252..1821431 Burkholderia phytofirmans PsJN 6279698 YP_001889336.1 CDS Bphyt_5619 NC_010676.1 1823171 1824160 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rme:Rmet_4214 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 1823171..1824160 Burkholderia phytofirmans PsJN 6280338 YP_001889337.1 CDS Bphyt_5620 NC_010676.1 1824229 1824402 D hypothetical protein 1824229..1824402 Burkholderia phytofirmans PsJN 6278508 YP_001889338.1 CDS Bphyt_5621 NC_010676.1 1824399 1824542 D hypothetical protein 1824399..1824542 Burkholderia phytofirmans PsJN 6278234 YP_001889339.1 CDS Bphyt_5622 NC_010676.1 1824575 1825882 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pap:PSPA7_6332 probable MFS dicarboxylate transporter; general substrate transporter 1824575..1825882 Burkholderia phytofirmans PsJN 6278032 YP_001889340.1 CDS Bphyt_5623 NC_010676.1 1825932 1826720 D PFAM: class II aldolase/adducin family protein; KEGG: rme:Rmet_4212 class II aldolase/adducin-like protein; class II aldolase/adducin family protein 1825932..1826720 Burkholderia phytofirmans PsJN 6280262 YP_001889341.1 CDS Bphyt_5624 NC_010676.1 1826779 1828098 R TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bmu:Bmul_6132 metabolite/H+ symporter, major facilitator superfamily (MFS); major facilitator superfamily metabolite/H+ symporter complement(1826779..1828098) Burkholderia phytofirmans PsJN 6277846 YP_001889342.1 CDS Bphyt_5625 NC_010676.1 1828161 1829375 R TIGRFAM: CitB domain protein; KEGG: bmu:Bmul_6133 CitB domain protein; CitB domain-containing protein complement(1828161..1829375) Burkholderia phytofirmans PsJN 6279952 YP_001889343.1 CDS Bphyt_5626 NC_010676.1 1829362 1830771 R catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; tricarballylate dehydrogenase complement(1829362..1830771) Burkholderia phytofirmans PsJN 6280434 YP_001889344.1 CDS Bphyt_5627 NC_010676.1 1830835 1831788 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_6135 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1830835..1831788) Burkholderia phytofirmans PsJN 6280120 YP_001889345.1 CDS Bphyt_5628 NC_010676.1 1832168 1833067 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_5369 transcriptional regulator, LysR family; LysR family transcriptional regulator 1832168..1833067 Burkholderia phytofirmans PsJN 6278550 YP_001889346.1 CDS Bphyt_5629 NC_010676.1 1833472 1834335 D PFAM: transcriptional regulator PadR family protein; KEGG: bxe:Bxe_B1092 transcriptional regulator, PadR-like family; PadR-like transcriptional regulator 1833472..1834335 Burkholderia phytofirmans PsJN 6277750 YP_001889347.1 CDS Bphyt_5630 NC_010676.1 1834438 1835289 D PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: bxe:Bxe_B1091 putative iron transport/utilisation related protein; FAD-binding 9 siderophore-interacting domain-containing protein 1834438..1835289 Burkholderia phytofirmans PsJN 6277793 YP_001889348.1 CDS Bphyt_5631 NC_010676.1 1835592 1836581 R with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK complement(1835592..1836581) Burkholderia phytofirmans PsJN 6278047 YP_001889349.1 CDS Bphyt_5632 NC_010676.1 1836596 1837228 R TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: mfa:Mfla_1105 dihydroxyacetone kinase, subunit L; dihydroxyacetone kinase subunit L complement(1836596..1837228) Burkholderia phytofirmans PsJN 6280553 YP_001889350.1 CDS Bphyt_5633 NC_010676.1 1837225 1838262 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_0704 ABC transporter related; ABC transporter-like protein complement(1837225..1838262) Burkholderia phytofirmans PsJN 6280139 YP_001889351.1 CDS Bphyt_5634 NC_010676.1 1838255 1839358 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mll5298 ABC transporter, ATP-binding protein; ABC transporter-like protein complement(1838255..1839358) Burkholderia phytofirmans PsJN 6279815 YP_001889352.1 CDS Bphyt_5635 NC_010676.1 1839363 1839557 R KEGG: ret:RHE_CH02985 hypothetical protein; hypothetical protein complement(1839363..1839557) Burkholderia phytofirmans PsJN 6278408 YP_001889353.1 CDS Bphyt_5636 NC_010676.1 1839554 1840507 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3568 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(1839554..1840507) Burkholderia phytofirmans PsJN 6278518 YP_001889354.1 CDS Bphyt_5637 NC_010676.1 1840504 1841460 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3567 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(1840504..1841460) Burkholderia phytofirmans PsJN 6279332 YP_001889355.1 CDS Bphyt_5638 NC_010676.1 1841528 1842859 R PFAM: extracellular solute-binding protein family 1; KEGG: bja:blr3566 ABC transporter substrate-binding protein; family 1 extracellular solute-binding protein complement(1841528..1842859) Burkholderia phytofirmans PsJN 6279389 YP_001889356.1 CDS Bphyt_5639 NC_010676.1 1842974 1843993 R SMART: regulatory protein LacI; KEGG: pol:Bpro_0698 regulatory protein, LacI; LacI family transcriptional regulator complement(1842974..1843993) Burkholderia phytofirmans PsJN 6278434 YP_001889357.1 CDS Bphyt_5640 NC_010676.1 1844452 1844763 R KEGG: bxe:Bxe_B0711 hypothetical protein; hypothetical protein complement(1844452..1844763) Burkholderia phytofirmans PsJN 6280126 YP_001889358.1 CDS Bphyt_5641 NC_010676.1 1844982 1845854 R KEGG: gvi:glr0395 hypothetical protein; hypothetical protein complement(1844982..1845854) Burkholderia phytofirmans PsJN 6278013 YP_001889359.1 CDS Bphyt_5642 NC_010676.1 1846165 1847250 R PFAM: protein of unknown function UPF0118; KEGG: sus:Acid_4934 protein of unknown function UPF0118; hypothetical protein complement(1846165..1847250) Burkholderia phytofirmans PsJN 6280179 YP_001889360.1 CDS Bphyt_5643 NC_010676.1 1847442 1847684 R PFAM: CsbD family protein; KEGG: bmu:Bmul_2001 CsbD family protein; CsbD family protein complement(1847442..1847684) Burkholderia phytofirmans PsJN 6279404 YP_001889361.1 CDS Bphyt_5644 NC_010676.1 1847763 1847945 R PFAM: CsbD family protein; KEGG: xac:XAC0100 hypothetical protein; CsbD family protein complement(1847763..1847945) Burkholderia phytofirmans PsJN 6280504 YP_001889362.1 CDS Bphyt_5645 NC_010676.1 1848491 1849639 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_B1089 enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/isomerase complement(1848491..1849639) Burkholderia phytofirmans PsJN 6280250 YP_001889363.1 CDS Bphyt_5646 NC_010676.1 1849636 1850454 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1849636..1850454) Burkholderia phytofirmans PsJN 6280329 YP_001889364.1 CDS Bphyt_5647 NC_010676.1 1850451 1851365 R KEGG: bxe:Bxe_B1087 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase complement(1850451..1851365) Burkholderia phytofirmans PsJN 6279135 YP_001889365.1 CDS Bphyt_5648 NC_010676.1 1851390 1852901 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B1086 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(1851390..1852901) Burkholderia phytofirmans PsJN 6278227 YP_001889366.1 CDS Bphyt_5649 NC_010676.1 1852974 1854665 R PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_B1085 AMP-binding enzyme; AMP-dependent synthetase and ligase complement(1852974..1854665) Burkholderia phytofirmans PsJN 6278731 YP_001889367.1 CDS Bphyt_5650 NC_010676.1 1854777 1855910 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B1084 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(1854777..1855910) Burkholderia phytofirmans PsJN 6277923 YP_001889368.1 CDS Bphyt_5651 NC_010676.1 1856181 1857218 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1083 transcriptional regulator, AraC family; AraC family transcriptional regulator 1856181..1857218 Burkholderia phytofirmans PsJN 6278304 YP_001889369.1 CDS Bphyt_5652 NC_010676.1 1857348 1858916 D PFAM: protein of unknown function DUF107; KEGG: bxe:Bxe_B1082 hypothetical protein; hypothetical protein 1857348..1858916 Burkholderia phytofirmans PsJN 6278950 YP_001889370.1 CDS Bphyt_5653 NC_010676.1 1858913 1859686 D PFAM: band 7 protein; KEGG: bxe:Bxe_B1081 hypothetical protein; hypothetical protein 1858913..1859686 Burkholderia phytofirmans PsJN 6280007 YP_001889371.1 CDS Bphyt_5654 NC_010676.1 1859816 1860073 D KEGG: bxe:Bxe_B1080 hypothetical protein; hypothetical protein 1859816..1860073 Burkholderia phytofirmans PsJN 6278572 YP_001889372.1 CDS Bphyt_5655 NC_010676.1 1860362 1860859 D PFAM: protein of unknown function DUF188; KEGG: bur:Bcep18194_A4809 protein of unknown function DUF188; hypothetical protein 1860362..1860859 Burkholderia phytofirmans PsJN 6278554 YP_001889373.1 CDS Bphyt_5656 NC_010676.1 1861012 1862313 D PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bxe:Bxe_B1078 nucleobase/cation symporter, (NCS2) family; xanthine/uracil/vitamin C permease 1861012..1862313 Burkholderia phytofirmans PsJN 6278484 YP_001889374.1 CDS Bphyt_5657 NC_010676.1 1862405 1862977 D PFAM: cytochrome B561; KEGG: bxe:Bxe_B1077 putative cytochrome b561; cytochrome B561 1862405..1862977 Burkholderia phytofirmans PsJN 6278091 YP_001889375.1 CDS Bphyt_5658 NC_010676.1 1863173 1863463 R KEGG: bxe:Bxe_B1076 hypothetical protein; hypothetical protein complement(1863173..1863463) Burkholderia phytofirmans PsJN 6277432 YP_001889376.1 CDS Bphyt_5659 NC_010676.1 1863862 1865853 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B1075 sigma54 specific transcriptional regulator with GAF sensor, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator 1863862..1865853 Burkholderia phytofirmans PsJN 6279832 YP_001889377.1 CDS Bphyt_5660 NC_010676.1 1865924 1866235 D PFAM: ferredoxin; KEGG: bxe:Bxe_B1074 ferredoxin-(2Fe-2S)-binding protein; ferredoxin 1865924..1866235 Burkholderia phytofirmans PsJN 6279772 YP_001889378.1 CDS Bphyt_5661 NC_010676.1 1866268 1866462 R KEGG: bxe:Bxe_B1073 hypothetical protein; hypothetical protein complement(1866268..1866462) Burkholderia phytofirmans PsJN 6280247 YP_001889379.1 CDS Bphyt_5662 NC_010676.1 1866488 1866682 R PFAM: protein of unknown function DUF1653; KEGG: bxe:Bxe_B1072 hypothetical protein; hypothetical protein complement(1866488..1866682) Burkholderia phytofirmans PsJN 6278806 YP_001889380.1 CDS Bphyt_5663 NC_010676.1 1866738 1867382 R PFAM: YheO domain protein; KEGG: bxe:Bxe_B1071 hypothetical protein; YheO domain-containing protein complement(1866738..1867382) Burkholderia phytofirmans PsJN 6278071 YP_001889381.1 CDS Bphyt_5664 NC_010676.1 1867575 1867793 D KEGG: bxe:Bxe_B1070 hypothetical protein; hypothetical protein 1867575..1867793 Burkholderia phytofirmans PsJN 6278473 YP_001889382.1 CDS Bphyt_5665 NC_010676.1 1868372 1868653 D KEGG: bxe:Bxe_B1068 hypothetical protein; hypothetical protein 1868372..1868653 Burkholderia phytofirmans PsJN 6277726 YP_001889383.1 CDS Bphyt_5666 NC_010676.1 1868785 1869057 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1868785..1869057 Burkholderia phytofirmans PsJN 6278371 YP_001889384.1 CDS Bphyt_5667 NC_010676.1 1869357 1870139 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_C0727 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(1869357..1870139) Burkholderia phytofirmans PsJN 6280239 YP_001889385.1 CDS Bphyt_5668 NC_010676.1 1870175 1871194 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B1066 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase GroES domain-containing protein complement(1870175..1871194) Burkholderia phytofirmans PsJN 6278534 YP_001889386.1 CDS Bphyt_5669 NC_010676.1 1871532 1871894 R PFAM: translation initiation factor SUI1; KEGG: pol:Bpro_2734 translation initiation factor SUI1; translation initiation factor SUI1 complement(1871532..1871894) Burkholderia phytofirmans PsJN 6278316 YP_001889387.1 CDS Bphyt_5670 NC_010676.1 1871952 1873133 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bvi:Bcep1808_5399 diguanylate cyclase; diguanylate cyclase complement(1871952..1873133) Burkholderia phytofirmans PsJN 6280420 YP_001889388.1 CDS Bphyt_5671 NC_010676.1 1873333 1874850 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bte:BTH_I3333 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(1873333..1874850) Burkholderia phytofirmans PsJN 6280023 YP_001889389.1 CDS Bphyt_5672 NC_010676.1 1875201 1876445 D PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_0221 cyanate transporter, putative; major facilitator superfamily protein 1875201..1876445 Burkholderia phytofirmans PsJN 6277849 YP_001889390.1 CDS Bphyt_5673 NC_010676.1 1876624 1877199 D PFAM: response regulator receiver; ANTAR domain protein; KEGG: bxe:Bxe_B1048 response regulator receiver (CheY) and ANTAR domain protein; response regulator receiver and ANTAR domain-containing protein 1876624..1877199 Burkholderia phytofirmans PsJN 6278028 YP_001889391.1 CDS Bphyt_5674 NC_010676.1 1877210 1878361 D KEGG: bxe:Bxe_B1047 ABC nitrate transporter, periplasmic ligand binding protein; ABC nitrate transporter periplasmic ligand binding protein 1877210..1878361 Burkholderia phytofirmans PsJN 6278979 YP_001889392.1 CDS Bphyt_5676 NC_010676.1 1879127 1880215 D PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B1044 ABC transporter, periplasmic ligand binding protein; family 1 extracellular solute-binding protein 1879127..1880215 Burkholderia phytofirmans PsJN 6278759 YP_001889393.1 CDS Bphyt_5677 NC_010676.1 1880315 1882084 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1043 ABC transporter, fused inner membrane subunits; binding-protein-dependent transport system inner membrane protein 1880315..1882084 Burkholderia phytofirmans PsJN 6277764 YP_001889394.1 CDS Bphyt_5678 NC_010676.1 1882077 1883144 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B1042 ABC spermidine/putrescine transporter, ATPase subunit; ABC transporter-like protein 1882077..1883144 Burkholderia phytofirmans PsJN 6278183 YP_001889395.1 CDS Bphyt_5679 NC_010676.1 1883195 1884280 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1041 outer membrane porin, OmpC family; porin 1883195..1884280 Burkholderia phytofirmans PsJN 6280446 YP_001889396.1 CDS Bphyt_5680 NC_010676.1 1884524 1884850 D KEGG: bxe:Bxe_B1039 hypothetical protein; hypothetical protein 1884524..1884850 Burkholderia phytofirmans PsJN 6277792 YP_001889397.1 CDS Bphyt_5681 NC_010676.1 1884952 1885959 R TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: bxe:Bxe_B1038 ABC sugar transporter, periplasmic ligand binding protein; rhamnose ABC transporter periplasmic rhamnose-binding protein complement(1884952..1885959) Burkholderia phytofirmans PsJN 6278661 YP_001889398.1 CDS Bphyt_5682 NC_010676.1 1886052 1887068 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1037 ABC sugar transporter, inner membrane subunit; monosaccharide-transporting ATPase complement(1886052..1887068) Burkholderia phytofirmans PsJN 6278745 YP_001889399.1 CDS Bphyt_5683 NC_010676.1 1887061 1888119 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1036 ABC sugar transporter, inner membrane subunit; monosaccharide-transporting ATPase complement(1887061..1888119) Burkholderia phytofirmans PsJN 6278925 YP_001889400.1 CDS Bphyt_5684 NC_010676.1 1888116 1889645 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1035 ABC sugar transporter, ATPase subunit; ABC transporter-like protein complement(1888116..1889645) Burkholderia phytofirmans PsJN 6280246 YP_001889401.1 CDS Bphyt_5685 NC_010676.1 1889663 1890556 R PFAM: amidohydrolase 2; KEGG: bxe:Bxe_B1034 hypothetical protein; amidohydrolase 2 complement(1889663..1890556) Burkholderia phytofirmans PsJN 6279836 YP_001889402.1 CDS Bphyt_5686 NC_010676.1 1890624 1890947 R TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: bxe:Bxe_B1033 hypothetical protein; L-rhamnose 1-epimerase complement(1890624..1890947) Burkholderia phytofirmans PsJN 6278525 YP_001889403.1 CDS Bphyt_5687 NC_010676.1 1891087 1892094 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1032 transcriptional regulator, LysR family; LysR family transcriptional regulator 1891087..1892094 Burkholderia phytofirmans PsJN 6280193 YP_001889404.1 CDS Bphyt_5688 NC_010676.1 1892111 1892893 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B1031 putative short-chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1892111..1892893) Burkholderia phytofirmans PsJN 6280423 YP_001889405.1 CDS Bphyt_5689 NC_010676.1 1892939 1894117 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bxe:Bxe_B1030 putative mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein complement(1892939..1894117) Burkholderia phytofirmans PsJN 6280055 YP_001889406.1 CDS Bphyt_5690 NC_010676.1 1894154 1895482 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1029 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(1894154..1895482) Burkholderia phytofirmans PsJN 6278882 YP_001889407.1 CDS Bphyt_5691 NC_010676.1 1895580 1896332 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1028 putative 3-oxoacyl-(acyl-carrier protein) reductase; short-chain dehydrogenase/reductase SDR complement(1895580..1896332) Burkholderia phytofirmans PsJN 6278861 YP_001889408.1 CDS Bphyt_5692 NC_010676.1 1896824 1897033 D KEGG: bxe:Bxe_B1025 hypothetical protein; hypothetical protein 1896824..1897033 Burkholderia phytofirmans PsJN 6278739 YP_001889409.1 CDS Bphyt_5693 NC_010676.1 1897154 1897852 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_4300 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1897154..1897852 Burkholderia phytofirmans PsJN 6279651 YP_001889410.1 CDS Bphyt_5694 NC_010676.1 1897872 1898879 R PFAM: proline racemase; KEGG: bxe:Bxe_B1024 putative proline racemase; proline racemase complement(1897872..1898879) Burkholderia phytofirmans PsJN 6278130 YP_001889411.1 CDS Bphyt_5695 NC_010676.1 1898913 1900034 R PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_B1023 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor complement(1898913..1900034) Burkholderia phytofirmans PsJN 6278107 YP_001889412.1 CDS Bphyt_5696 NC_010676.1 1900169 1900879 R PFAM: phospholipid/glycerol acyltransferase; KEGG: bxe:Bxe_B1022 putative acyltransferase; phospholipid/glycerol acyltransferase complement(1900169..1900879) Burkholderia phytofirmans PsJN 6278560 YP_001889413.1 CDS Bphyt_5697 NC_010676.1 1901071 1901442 R KEGG: pap:PSPA7_4255 hypothetical protein; hypothetical protein complement(1901071..1901442) Burkholderia phytofirmans PsJN 6278454 YP_001889414.1 CDS Bphyt_5698 NC_010676.1 1901509 1902756 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1021 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(1901509..1902756) Burkholderia phytofirmans PsJN 6279920 YP_001889415.1 CDS Bphyt_5699 NC_010676.1 1903139 1903411 D KEGG: bxe:Bxe_B1020 hypothetical protein; hypothetical protein 1903139..1903411 Burkholderia phytofirmans PsJN 6278562 YP_001889416.1 CDS Bphyt_5700 NC_010676.1 1903471 1903788 R KEGG: bxe:Bxe_B1019 hypothetical protein; hypothetical protein complement(1903471..1903788) Burkholderia phytofirmans PsJN 6279646 YP_001889417.1 CDS Bphyt_5701 NC_010676.1 1904576 1904902 D KEGG: bxe:Bxe_B1018 hypothetical protein; hypothetical protein 1904576..1904902 Burkholderia phytofirmans PsJN 6279065 YP_001889418.1 CDS Bphyt_5702 NC_010676.1 1905165 1905686 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bxe:Bxe_B1017 protein tyrosine phosphatase; protein tyrosine phosphatase complement(1905165..1905686) Burkholderia phytofirmans PsJN 6277479 YP_001889419.1 CDS Bphyt_5703 NC_010676.1 1905913 1906113 R KEGG: bxe:Bxe_B1016 hypothetical protein; hypothetical protein complement(1905913..1906113) Burkholderia phytofirmans PsJN 6277318 YP_001889420.1 CDS Bphyt_5704 NC_010676.1 1906546 1907223 D PFAM: ChaC family protein; KEGG: bxe:Bxe_A2888 ChaC-like protein; ChaC family protein 1906546..1907223 Burkholderia phytofirmans PsJN 6277517 YP_001889421.1 CDS Bphyt_5705 NC_010676.1 1907228 1907905 R PFAM: heat shock protein DnaJ domain protein; KEGG: bxe:Bxe_B1015 putative DnaJ-like protein; heat shock protein DnaJ domain-containing protein complement(1907228..1907905) Burkholderia phytofirmans PsJN 6279811 YP_001889422.1 CDS Bphyt_5706 NC_010676.1 1908365 1909024 D PFAM: NADPH-dependent FMN reductase; KEGG: bxe:Bxe_B1014 NADPH-dependent FMN reductase family protein; NADPH-dependent FMN reductase 1908365..1909024 Burkholderia phytofirmans PsJN 6277442 YP_001889423.1 CDS Bphyt_5707 NC_010676.1 1909348 1909563 D KEGG: bxe:Bxe_B1013 hypothetical protein; hypothetical protein 1909348..1909563 Burkholderia phytofirmans PsJN 6279113 YP_001889424.1 CDS Bphyt_5708 NC_010676.1 1909698 1910651 D KEGG: bxe:Bxe_B1012 hypothetical protein; hypothetical protein 1909698..1910651 Burkholderia phytofirmans PsJN 6277583 YP_001889425.1 CDS Bphyt_5709 NC_010676.1 1910632 1912086 D catalyzes the formation of indole-3-acetic acid from indole-3-acetamide; indole acetimide hydrolase 1910632..1912086 Burkholderia phytofirmans PsJN 6277338 YP_001889426.1 CDS Bphyt_5710 NC_010676.1 1912136 1912924 D PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: bxe:Bxe_B1010 CDP-diacylglycerol diphosphatase; CDP-diacylglycerol diphosphatase 1912136..1912924 Burkholderia phytofirmans PsJN 6277328 YP_001889427.1 CDS Bphyt_5711 NC_010676.1 1913077 1914069 D PFAM: fatty acid desaturase; KEGG: bxe:Bxe_B1009 putative fatty acid desaturase; fatty acid desaturase 1913077..1914069 Burkholderia phytofirmans PsJN 6278951 YP_001889428.1 CDS Bphyt_5712 NC_010676.1 1914232 1915134 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS03073 probable transcription regulator protein; LysR family transcriptional regulator complement(1914232..1915134) Burkholderia phytofirmans PsJN 6279177 YP_001889429.1 CDS Bphyt_5713 NC_010676.1 1915246 1915569 D PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B1954 hypothetical protein; carboxymuconolactone decarboxylase 1915246..1915569 Burkholderia phytofirmans PsJN 6277599 YP_001889430.1 CDS Bphyt_5714 NC_010676.1 1915585 1915989 D KEGG: bvi:Bcep1808_4283 cupin 2, conserved barrel domain protein; cupin 1915585..1915989 Burkholderia phytofirmans PsJN 6279639 YP_001889431.1 CDS Bphyt_5715 NC_010676.1 1916022 1916990 R TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: spe:Spro_2444 Dyp-type peroxidase family; dyp-type peroxidase family protein complement(1916022..1916990) Burkholderia phytofirmans PsJN 6279491 YP_001889432.1 CDS Bphyt_5716 NC_010676.1 1917392 1917952 D KEGG: bte:BTH_I2760 hypothetical protein; hypothetical protein 1917392..1917952 Burkholderia phytofirmans PsJN 6277644 YP_001889433.1 CDS Bphyt_5717 NC_010676.1 1918002 1920416 R KEGG: bbt:BBta_7794 DNA-binding ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(1918002..1920416) Burkholderia phytofirmans PsJN 6280352 YP_001889434.1 CDS Bphyt_5718 NC_010676.1 1920450 1920854 R KEGG: swi:Swit_1147 molecular chaperone (small heat shock protein)-like protein; molecular chaperone (small heat shock protein)-like protein complement(1920450..1920854) Burkholderia phytofirmans PsJN 6279206 YP_001889435.1 CDS Bphyt_5720 NC_010676.1 1922190 1922459 R hypothetical protein complement(1922190..1922459) Burkholderia phytofirmans PsJN 6278675 YP_001889436.1 CDS Bphyt_5721 NC_010676.1 1922633 1923166 D PFAM: TOBE domain protein; KEGG: bur:Bcep18194_C7726 molybdenum-pterin binding protein; TOBE domain-containing protein 1922633..1923166 Burkholderia phytofirmans PsJN 6277619 YP_001889437.1 CDS Bphyt_5724 NC_010676.1 1926436 1927824 D hypothetical protein 1926436..1927824 Burkholderia phytofirmans PsJN 6278535 YP_001889438.1 CDS Bphyt_5725 NC_010676.1 1927829 1928836 D TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bxe:Bxe_A3839 cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 1927829..1928836 Burkholderia phytofirmans PsJN 6279270 YP_001889439.1 CDS Bphyt_5726 NC_010676.1 1928907 1929818 D PFAM: protein of unknown function UPF0187; KEGG: bxe:Bxe_A3838 hypothetical protein; hypothetical protein 1928907..1929818 Burkholderia phytofirmans PsJN 6279870 YP_001889440.1 CDS Bphyt_5727 NC_010676.1 1930170 1930643 D PFAM: Ferritin Dps family protein; KEGG: reu:Reut_A1742 ferritin and Dps; ferritin Dps family protein 1930170..1930643 Burkholderia phytofirmans PsJN 6277477 YP_001889441.1 CDS Bphyt_5728 NC_010676.1 1930669 1931079 D KEGG: ddi:DDBDRAFT_0217005 hypothetical protein; hypothetical protein 1930669..1931079 Burkholderia phytofirmans PsJN 6277459 YP_001889442.1 CDS Bphyt_5729 NC_010676.1 1931359 1931796 D PFAM: response regulator receiver; KEGG: bxe:Bxe_B0483 response regulator receiver domain protein(CheY); response regulator receiver protein 1931359..1931796 Burkholderia phytofirmans PsJN 6277501 YP_001889443.1 CDS Bphyt_5730 NC_010676.1 1932013 1932288 D KEGG: bxe:Bxe_B1161 hypothetical protein; hypothetical protein 1932013..1932288 Burkholderia phytofirmans PsJN 6278576 YP_001889444.1 CDS Bphyt_5731 NC_010676.1 1932720 1933652 D PFAM: beta-lactamase domain protein; KEGG: bur:Bcep18194_B2842 beta-lactamase-like; beta-lactamase domain-containing protein 1932720..1933652 Burkholderia phytofirmans PsJN 6280384 YP_001889445.1 CDS Bphyt_5732 NC_010676.1 1933975 1934319 R KEGG: bxe:Bxe_B2397 putative heat shock HSP20-related protein; hypothetical protein complement(1933975..1934319) Burkholderia phytofirmans PsJN 6278631 YP_001889446.1 CDS Bphyt_5733 NC_010676.1 1934346 1934786 R PFAM: heat shock protein Hsp20; KEGG: bxe:Bxe_B2398 putative heat shock protein; heat shock protein Hsp20 complement(1934346..1934786) Burkholderia phytofirmans PsJN 6279839 YP_001889447.1 CDS Bphyt_5734 NC_010676.1 1935037 1935459 D KEGG: bxe:Bxe_B2399 hypothetical protein; hypothetical protein 1935037..1935459 Burkholderia phytofirmans PsJN 6279033 YP_001889448.1 CDS Bphyt_5735 NC_010676.1 1935639 1937171 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bch:Bcen2424_1611 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1935639..1937171) Burkholderia phytofirmans PsJN 6279520 YP_001889449.1 CDS Bphyt_5736 NC_010676.1 1937185 1938786 R PFAM: Aldehyde Dehydrogenase_; KEGG: pmy:Pmen_0227 aldehyde dehydrogenase; aldehyde dehydrogenase complement(1937185..1938786) Burkholderia phytofirmans PsJN 6277405 YP_001889450.1 CDS Bphyt_5737 NC_010676.1 1938899 1940002 R PFAM: Malate/L-lactate dehydrogenase; KEGG: bpa:BPP2552 putative malate dehydrogenase; malate/L-lactate dehydrogenase complement(1938899..1940002) Burkholderia phytofirmans PsJN 6278953 YP_001889451.1 CDS Bphyt_5738 NC_010676.1 1940076 1941413 R PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_II1097 major facilitator family transporter; major facilitator superfamily protein complement(1940076..1941413) Burkholderia phytofirmans PsJN 6280387 YP_001889452.1 CDS Bphyt_5739 NC_010676.1 1941557 1942315 R PFAM: Dimethylmenaquinone methyltransferase; KEGG: smd:Smed_4023 dimethylmenaquinone methyltransferase; hypothetical protein complement(1941557..1942315) Burkholderia phytofirmans PsJN 6277660 YP_001889453.1 CDS Bphyt_5740 NC_010676.1 1942358 1943569 R PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_C7282 outer membrane protein (porin); porin complement(1942358..1943569) Burkholderia phytofirmans PsJN 6279251 YP_001889454.1 CDS Bphyt_5741 NC_010676.1 1943720 1944916 R catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase complement(1943720..1944916) Burkholderia phytofirmans PsJN 6278496 YP_001889455.1 CDS Bphyt_5742 NC_010676.1 1945068 1945769 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pen:PSEEN1737 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(1945068..1945769) Burkholderia phytofirmans PsJN 6278007 YP_001889456.1 CDS Bphyt_5743 NC_010676.1 1946080 1947465 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2344 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1946080..1947465) Burkholderia phytofirmans PsJN 6279229 YP_001889457.1 CDS Bphyt_5744 NC_010676.1 1947555 1948721 R PFAM: peptidase M24; KEGG: tth:TTC0703 xaa-pro aminopeptidase; peptidase M24 complement(1947555..1948721) Burkholderia phytofirmans PsJN 6278955 YP_001889458.1 CDS Bphyt_5745 NC_010676.1 1948908 1949903 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcb:XC_2486 galactose-binding protein regulator; LysR family transcriptional regulator 1948908..1949903 Burkholderia phytofirmans PsJN 6279859 YP_001889459.1 CDS Bphyt_5746 NC_010676.1 1949920 1950750 R PFAM: Myo-inositol catabolism IolB domain protein; KEGG: mlo:mll4976 hypothetical protein; myo-inositol catabolism IolB domain-containing protein complement(1949920..1950750) Burkholderia phytofirmans PsJN 6277504 YP_001889460.1 CDS Bphyt_5747 NC_010676.1 1950820 1952298 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: bpt:Bpet3940 hypothetical protein; mannitol dehydrogenase domain complement(1950820..1952298) Burkholderia phytofirmans PsJN 6277313 YP_001889461.1 CDS Bphyt_5748 NC_010676.1 1952285 1953343 R catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase complement(1952285..1953343) Burkholderia phytofirmans PsJN 6278551 YP_001889462.1 CDS Bphyt_5749 NC_010676.1 1953765 1955453 R KEGG: smd:Smed_5113 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase complement(1953765..1955453) Burkholderia phytofirmans PsJN 6277347 YP_001889463.1 CDS Bphyt_5750 NC_010676.1 1955720 1957240 R PFAM: Amidase; KEGG: mex:Mext_1364 amidase; amidase complement(1955720..1957240) Burkholderia phytofirmans PsJN 6278757 YP_001889464.1 CDS Bphyt_5751 NC_010676.1 1957269 1958033 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpc:RPC_3013 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1957269..1958033) Burkholderia phytofirmans PsJN 6278790 YP_001889465.1 CDS Bphyt_5752 NC_010676.1 1958092 1958742 R PFAM: ANTAR domain protein; KEGG: vei:Veis_4901 response regulator receiver and ANTAR domain protein; response regulator receiver and ANTAR domain-containing protein complement(1958092..1958742) Burkholderia phytofirmans PsJN 6278325 YP_001889466.1 CDS Bphyt_5753 NC_010676.1 1958744 1959898 R KEGG: dac:Daci_3638 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; branched chain amino acid family ABC transporter substrate-binding protein complement(1958744..1959898) Burkholderia phytofirmans PsJN 6280503 YP_001889467.1 CDS Bphyt_5754 NC_010676.1 1959980 1960966 R PFAM: Acetamidase/Formamidase; KEGG: acr:Acry_1423 acetamidase/formamidase; Acetamidase/Formamidase complement(1959980..1960966) Burkholderia phytofirmans PsJN 6280441 YP_001889468.1 CDS Bphyt_5755 NC_010676.1 1960980 1961687 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_3885 putative UreA/short-chain amide transport system ATP-binding protein; ABC transporter-like protein complement(1960980..1961687) Burkholderia phytofirmans PsJN 6277615 YP_001889469.1 CDS Bphyt_5756 NC_010676.1 1961684 1962394 R PFAM: ABC transporter related; KEGG: azc:AZC_3886 ATPase; ABC transporter-like protein complement(1961684..1962394) Burkholderia phytofirmans PsJN 6279531 YP_001889470.1 CDS Bphyt_5757 NC_010676.1 1962391 1963461 R PFAM: inner-membrane translocator; KEGG: mrd:Mrad2831_3320 inner-membrane translocator; inner-membrane translocator complement(1962391..1963461) Burkholderia phytofirmans PsJN 6277533 YP_001889471.1 CDS Bphyt_5758 NC_010676.1 1963471 1964340 R PFAM: inner-membrane translocator; KEGG: rpd:RPD_4291 inner-membrane translocator; inner-membrane translocator complement(1963471..1964340) Burkholderia phytofirmans PsJN 6278453 YP_001889472.1 CDS Bphyt_5759 NC_010676.1 1964405 1965640 R KEGG: azc:AZC_3889 putative UreA/short-chain amide transport system substrate-binding protein precursor; UreA/short-chain amide transport system substrate-binding protein complement(1964405..1965640) Burkholderia phytofirmans PsJN 6280394 YP_001889473.1 CDS Bphyt_5760 NC_010676.1 1965934 1966380 R PFAM: helix-turn-helix HxlR type; KEGG: bxe:Bxe_B1101 putative transcriptional regulator; HxlR family transcriptional regulator complement(1965934..1966380) Burkholderia phytofirmans PsJN 6277430 YP_001889474.1 CDS Bphyt_5761 NC_010676.1 1966546 1967517 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_B1099 putative epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1966546..1967517 Burkholderia phytofirmans PsJN 6277396 YP_001889475.1 CDS Bphyt_5762 NC_010676.1 1967594 1968214 D PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bxe:Bxe_B1098 putative reductase; coenzyme F420-dependent NADP oxidoreductase 1967594..1968214 Burkholderia phytofirmans PsJN 6278323 YP_001889476.1 CDS Bphyt_5763 NC_010676.1 1968427 1968750 D PFAM: regulatory protein ArsR; KEGG: bvi:Bcep1808_4684 regulatory protein, ArsR; ArsR family transcriptional regulator 1968427..1968750 Burkholderia phytofirmans PsJN 6277424 YP_001889477.1 CDS Bphyt_5764 NC_010676.1 1968763 1969239 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_A2179 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 1968763..1969239 Burkholderia phytofirmans PsJN 6277337 YP_001889478.1 CDS Bphyt_5765 NC_010676.1 1969263 1969757 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bvi:Bcep1808_4683 protein tyrosine phosphatase; protein tyrosine phosphatase 1969263..1969757 Burkholderia phytofirmans PsJN 6277304 YP_001889479.1 CDS Bphyt_5768 NC_010676.1 1970036 1970758 D TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bam:Bamb_5598 NADPH-dependent FMN reductase; arsenical resistance protein ArsH 1970036..1970758 Burkholderia phytofirmans PsJN 6278459 YP_001889480.1 CDS Bphyt_5769 NC_010676.1 1971069 1973081 D PFAM: beta-lactamase; KEGG: sfu:Sfum_0674 beta-lactamase; beta-lactamase 1971069..1973081 Burkholderia phytofirmans PsJN 6279234 YP_001889481.1 CDS Bphyt_5770 NC_010676.1 1973268 1975382 R PFAM: CoA-binding domain protein; KEGG: reh:H16_B1438 6-carboxyhexanoate-CoA ligase; CoA-binding domain-containing protein complement(1973268..1975382) Burkholderia phytofirmans PsJN 6279219 YP_001889482.1 CDS Bphyt_5771 NC_010676.1 1975406 1976188 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_B1439 enoyl-CoA hydratase/carnithine racemase; enoyl-CoA hydratase/isomerase complement(1975406..1976188) Burkholderia phytofirmans PsJN 6280277 YP_001889483.1 CDS Bphyt_5772 NC_010676.1 1976474 1977805 D PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_1075 major facilitator superfamily MFS_1; major facilitator superfamily protein 1976474..1977805 Burkholderia phytofirmans PsJN 6279243 YP_001889484.1 CDS Bphyt_5773 NC_010676.1 1977819 1978610 R PFAM: regulatory protein IclR; KEGG: reh:H16_B1435 transcriptional regulator, IclR-family; IclR family transcriptional regulator complement(1977819..1978610) Burkholderia phytofirmans PsJN 6279344 YP_001889485.1 CDS Bphyt_5775 NC_010676.1 1979383 1981047 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2490 histidine kinase; histidine kinase complement(1979383..1981047) Burkholderia phytofirmans PsJN 6278840 YP_001889486.1 CDS Bphyt_5776 NC_010676.1 1981049 1982041 R PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: bxe:Bxe_B2489 anti-sigma regulatory factor (Ser/Thr protein kinase and phosphatase); anti-sigma regulatory factor complement(1981049..1982041) Burkholderia phytofirmans PsJN 6277475 YP_001889487.1 CDS Bphyt_5777 NC_010676.1 1982026 1982493 R PFAM: ATP-binding region ATPase domain protein; KEGG: bxe:Bxe_B2488 putative anti-sigma regulatory factor (Ser/Thr protein kinase); anti-sigma regulatory factor complement(1982026..1982493) Burkholderia phytofirmans PsJN 6278820 YP_001889488.1 CDS Bphyt_5778 NC_010676.1 1982429 1982806 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bxe:Bxe_B2487 anti-sigma-factor antagonist (STAS) domain protein; anti-sigma-factor antagonist complement(1982429..1982806) Burkholderia phytofirmans PsJN 6280079 YP_001889489.1 CDS Bphyt_5779 NC_010676.1 1982808 1983674 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bxe:Bxe_B2486 anti-sigma-factor antagonist (STAS) domain protein; anti-sigma-factor antagonist complement(1982808..1983674) Burkholderia phytofirmans PsJN 6279755 YP_001889490.1 CDS Bphyt_5780 NC_010676.1 1984169 1984372 D hypothetical protein 1984169..1984372 Burkholderia phytofirmans PsJN 6278934 YP_001889491.1 CDS Bphyt_5781 NC_010676.1 1984457 1985272 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pna:Pnap_2705 regulatory proteins, IclR; IclR family transcriptional regulator 1984457..1985272 Burkholderia phytofirmans PsJN 6277456 YP_001889492.1 CDS Bphyt_5782 NC_010676.1 1985437 1986801 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro03857 metabolite transporter, MFS superfamily; major facilitator superfamily protein 1985437..1986801 Burkholderia phytofirmans PsJN 6277822 YP_001889493.1 CDS Bphyt_5783 NC_010676.1 1986879 1987544 D KEGG: atc:AGR_L_563 hypothetical protein; hypothetical protein 1986879..1987544 Burkholderia phytofirmans PsJN 6277969 YP_001889494.1 CDS Bphyt_5785 NC_010676.1 1988209 1989660 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bmu:Bmul_3543 transcriptional regulator, GntR family with aminotransferase domain; GntR family transcriptional regulator complement(1988209..1989660) Burkholderia phytofirmans PsJN 6277394 YP_001889495.1 CDS Bphyt_5786 NC_010676.1 1989726 1991282 R PFAM: EAL domain protein; KEGG: bxe:Bxe_B2099 putative diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase complement(1989726..1991282) Burkholderia phytofirmans PsJN 6278253 YP_001889496.1 CDS Bphyt_5787 NC_010676.1 1991531 1992982 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: hch:HCH_03523 transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; GntR family transcriptional regulator 1991531..1992982 Burkholderia phytofirmans PsJN 6277598 YP_001889497.1 CDS Bphyt_5789 NC_010676.1 1993607 1994413 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: atc:AGR_L_554 hypothetical protein; IclR family transcriptional regulator complement(1993607..1994413) Burkholderia phytofirmans PsJN 6277600 YP_001889498.1 CDS Bphyt_5790 NC_010676.1 1994500 1995933 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:bll5462 hypothetical metabolite transport protein; major facilitator superfamily protein 1994500..1995933 Burkholderia phytofirmans PsJN 6277334 YP_001889499.1 CDS Bphyt_5791 NC_010676.1 1996050 1996502 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bcm:Bcenmc03_3793 cupin 2 conserved barrel domain protein; cupin 1996050..1996502 Burkholderia phytofirmans PsJN 6278894 YP_001889500.1 CDS Bphyt_5792 NC_010676.1 1996636 1997472 D PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: xau:Xaut_1616 shikimate dehydrogenase substrate binding domain protein; shikimate dehydrogenase 1996636..1997472 Burkholderia phytofirmans PsJN 6279816 YP_001889501.1 CDS Bphyt_5793 NC_010676.1 1997596 1998615 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bcs:BCAN_B0405 hypothetical protein; oxidoreductase domain-containing protein 1997596..1998615 Burkholderia phytofirmans PsJN 6280041 YP_001889502.1 CDS Bphyt_5795 NC_010676.1 1999039 2000610 R PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: reh:H16_A2758 altronate dehydratase; altronate dehydratase complement(1999039..2000610) Burkholderia phytofirmans PsJN 6277546 YP_001889503.1 CDS Bphyt_5796 NC_010676.1 2000711 2001406 R KEGG: atc:AGR_L_563 hypothetical protein; hypothetical protein complement(2000711..2001406) Burkholderia phytofirmans PsJN 6277443 YP_001889504.1 CDS Bphyt_5797 NC_010676.1 2001436 2002326 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: csa:Csal_1737 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(2001436..2002326) Burkholderia phytofirmans PsJN 6277411 YP_001889505.1 CDS Bphyt_5798 NC_010676.1 2002340 2003149 R KEGG: bte:BTH_II1322 hydratase/decarboxylase family protein; hydratase/decarboxylase family protein complement(2002340..2003149) Burkholderia phytofirmans PsJN 6277865 YP_001889506.1 CDS Bphyt_5799 NC_010676.1 2003146 2003499 R PFAM: regulatory protein IclR; KEGG: pau:PA14_02910 putative transcriptional regulator, IclR family; IclR family transcriptional regulator complement(2003146..2003499) Burkholderia phytofirmans PsJN 6277441 YP_001889507.1 CDS Bphyt_5800 NC_010676.1 2003586 2005019 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:bll5462 hypothetical metabolite transport protein; major facilitator superfamily protein 2003586..2005019 Burkholderia phytofirmans PsJN 6279490 YP_001889508.1 CDS Bphyt_5801 NC_010676.1 2005346 2006581 D PFAM: porin Gram-negative type; KEGG: bmu:Bmul_6035 porin gram-negative type; porin 2005346..2006581 Burkholderia phytofirmans PsJN 6277329 YP_001889509.1 CDS Bphyt_5802 NC_010676.1 2006663 2007847 D KEGG: bch:Bcen2424_6697 hypothetical protein; hypothetical protein 2006663..2007847 Burkholderia phytofirmans PsJN 6279806 YP_001889510.1 CDS Bphyt_5803 NC_010676.1 2007881 2009323 D PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_C1357 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase 2007881..2009323 Burkholderia phytofirmans PsJN 6277621 YP_001889511.1 CDS Bphyt_5804 NC_010676.1 2009908 2010210 D PFAM: regulatory protein ArsR; KEGG: bxe:Bxe_B2017 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2009908..2010210 Burkholderia phytofirmans PsJN 6277705 YP_001889512.1 CDS Bphyt_5805 NC_010676.1 2010297 2011358 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_B2018 putative N-ethylmaleimide reductase; NADH:flavin oxidoreductase 2010297..2011358 Burkholderia phytofirmans PsJN 6279496 YP_001889513.1 CDS Bphyt_5806 NC_010676.1 2011554 2012105 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B2019 putative acetyltransferase; N-acetyltransferase GCN5 complement(2011554..2012105) Burkholderia phytofirmans PsJN 6277659 YP_001889514.1 CDS Bphyt_5807 NC_010676.1 2012220 2012867 D PFAM: SNARE associated Golgi protein; KEGG: reu:Reut_B4005 DedA; hypothetical protein 2012220..2012867 Burkholderia phytofirmans PsJN 6277438 YP_001889515.1 CDS Bphyt_5808 NC_010676.1 2013028 2013525 R KEGG: cak:Caul_1647 activator of HSP90 ATPase 1 family protein; activator of HSP90 ATPase 1 family protein complement(2013028..2013525) Burkholderia phytofirmans PsJN 6278468 YP_001889516.1 CDS Bphyt_5809 NC_010676.1 2013522 2013860 R PFAM: regulatory protein ArsR; KEGG: cak:Caul_1646 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(2013522..2013860) Burkholderia phytofirmans PsJN 6278804 YP_001889517.1 CDS Bphyt_5810 NC_010676.1 2013864 2014325 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reu:Reut_A2755 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2013864..2014325) Burkholderia phytofirmans PsJN 6277312 YP_001889518.1 CDS Bphyt_5811 NC_010676.1 2014530 2014982 D PFAM: regulatory protein MarR; KEGG: bxe:Bxe_B2020 transcriptional regulator, MarR family; MarR family transcriptional regulator 2014530..2014982 Burkholderia phytofirmans PsJN 6279437 YP_001889519.1 CDS Bphyt_5812 NC_010676.1 2015000 2015563 D PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_B2021 isochorismatase hydrolase; isochorismatase hydrolase 2015000..2015563 Burkholderia phytofirmans PsJN 6279539 YP_001889520.1 CDS Bphyt_5813 NC_010676.1 2015628 2016968 D PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2022 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein 2015628..2016968 Burkholderia phytofirmans PsJN 6278964 YP_001889521.1 CDS Bphyt_5814 NC_010676.1 2017055 2018578 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B2023 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(2017055..2018578) Burkholderia phytofirmans PsJN 6279384 YP_001889522.1 CDS Bphyt_5815 NC_010676.1 2018839 2019795 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B5033 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator complement(2018839..2019795) Burkholderia phytofirmans PsJN 6278448 YP_001889523.1 CDS Bphyt_5816 NC_010676.1 2020075 2021481 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:bll5462 hypothetical metabolite transport protein; major facilitator superfamily protein 2020075..2021481 Burkholderia phytofirmans PsJN 6279319 YP_001889524.1 CDS Bphyt_5817 NC_010676.1 2021515 2022582 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pol:Bpro_4498 oxidoreductase-like; oxidoreductase domain-containing protein 2021515..2022582 Burkholderia phytofirmans PsJN 6279425 YP_001889525.1 CDS Bphyt_5818 NC_010676.1 2022626 2023066 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2022626..2023066 Burkholderia phytofirmans PsJN 6278599 YP_001889526.1 CDS Bphyt_5819 NC_010676.1 2023128 2024228 R KEGG: cak:Caul_0094 hypothetical protein; hypothetical protein complement(2023128..2024228) Burkholderia phytofirmans PsJN 6277541 YP_001889527.1 CDS Bphyt_5820 NC_010676.1 2024430 2025335 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2024 transcriptional regulator, LysR family; LysR family transcriptional regulator 2024430..2025335 Burkholderia phytofirmans PsJN 6277821 YP_001889528.1 CDS Bphyt_5821 NC_010676.1 2025473 2026144 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B2025 HAD-superfamily hydrolase, subfamily IA, variant2; HAD-superfamily hydrolase 2025473..2026144 Burkholderia phytofirmans PsJN 6277547 YP_001889529.1 CDS Bphyt_5822 NC_010676.1 2026237 2027304 D PFAM: alanine racemase domain protein; KEGG: bxe:Bxe_B2026 metal-activated pyridoxal enzyme; alanine racemase domain-containing protein 2026237..2027304 Burkholderia phytofirmans PsJN 6277724 YP_001889530.1 CDS Bphyt_5823 NC_010676.1 2027378 2027830 R TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bxe:Bxe_B2027 homoprotocatechuate degradative operon transcriptional repressor, MarR family (HpaR); MarR family transcriptional regulator complement(2027378..2027830) Burkholderia phytofirmans PsJN 6277649 YP_001889531.1 CDS Bphyt_5824 NC_010676.1 2027966 2028739 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_B2028 putative 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxylase/isomerase (HpaG); 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 2027966..2028739 Burkholderia phytofirmans PsJN 6278442 YP_001889532.1 CDS Bphyt_5825 NC_010676.1 2028736 2029494 D KEGG: bxe:Bxe_B2029 putative 5-oxo-1,2,5 tricarboxilic-3-penta acido decarboxylase (HpaG2); TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 2028736..2029494 Burkholderia phytofirmans PsJN 6279176 YP_001889533.1 CDS Bphyt_5826 NC_010676.1 2029519 2030976 D TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B2030 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase (HpaE); 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 2029519..2030976 Burkholderia phytofirmans PsJN 6278246 YP_001889534.1 CDS Bphyt_5827 NC_010676.1 2031050 2031913 D KEGG: bxe:Bxe_B2031 3,4-dihydroxyphenylacetate 2,3-dioxygenase(HpaD); TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 2031050..2031913 Burkholderia phytofirmans PsJN 6278540 YP_001889535.1 CDS Bphyt_5828 NC_010676.1 2031935 2032336 D PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bxe:Bxe_B2032 5-carboxymethyl-2-hydroxymuconate isomerase(HpcD); 5-carboxymethyl-2-hydroxymuconate isomerase 2031935..2032336 Burkholderia phytofirmans PsJN 6279211 YP_001889536.1 CDS Bphyt_5829 NC_010676.1 2032357 2033160 D KEGG: bxe:Bxe_B2033 putative 2-oxo-hept-3-ene-1,7-dioate hydratase(HpaH); TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 2032357..2033160 Burkholderia phytofirmans PsJN 6278567 YP_001889537.1 CDS Bphyt_5830 NC_010676.1 2033182 2033985 D KEGG: bxe:Bxe_B2034 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase(HpaI); TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 2033182..2033985 Burkholderia phytofirmans PsJN 6277444 YP_001889538.1 CDS Bphyt_5831 NC_010676.1 2034038 2036371 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_B2035 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase complement(2034038..2036371) Burkholderia phytofirmans PsJN 6278834 YP_001889539.1 CDS Bphyt_5832 NC_010676.1 2036510 2037655 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B2036 putative diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(2036510..2037655) Burkholderia phytofirmans PsJN 6278541 YP_001889540.1 CDS Bphyt_5833 NC_010676.1 2038210 2038665 D KEGG: bxe:Bxe_B2037 hypothetical protein; hypothetical protein 2038210..2038665 Burkholderia phytofirmans PsJN 6279714 YP_001889541.1 CDS Bphyt_5834 NC_010676.1 2038850 2039749 D KEGG: bxe:Bxe_B2038 hypothetical protein; hypothetical protein 2038850..2039749 Burkholderia phytofirmans PsJN 6277487 YP_001889542.1 CDS Bphyt_5835 NC_010676.1 2039746 2040534 D TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_B2039 hypothetical protein; cellulose synthase operon protein YhjQ 2039746..2040534 Burkholderia phytofirmans PsJN 6278668 YP_001889543.1 CDS Bphyt_5836 NC_010676.1 2040531 2042735 D KEGG: bxe:Bxe_B2040 cellulose synthase (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; cellulose synthase catalytic subunit 2040531..2042735 Burkholderia phytofirmans PsJN 6277371 YP_001889544.1 CDS Bphyt_5837 NC_010676.1 2042739 2045321 D binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 2042739..2045321 Burkholderia phytofirmans PsJN 6277460 YP_001889545.1 CDS Bphyt_5838 NC_010676.1 2045332 2046513 D catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase 2045332..2046513 Burkholderia phytofirmans PsJN 6279421 YP_001889546.1 CDS Bphyt_5839 NC_010676.1 2046504 2051213 D PFAM: TPR repeat-containing protein; cellulose synthase operon C domain protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_B2043 putative cellulose synthase operon protein C; cellulose synthase operon C domain-containing protein 2046504..2051213 Burkholderia phytofirmans PsJN 6278849 YP_001889547.1 CDS Bphyt_5840 NC_010676.1 2051276 2052517 R KEGG: bxe:Bxe_B2044 hypothetical protein; hypothetical protein complement(2051276..2052517) Burkholderia phytofirmans PsJN 6279081 YP_001889548.1 CDS Bphyt_5841 NC_010676.1 2052974 2055637 D KEGG: pfo:Pfl_3140 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 2052974..2055637 Burkholderia phytofirmans PsJN 6278958 YP_001889549.1 CDS Bphyt_5842 NC_010676.1 2055672 2056592 D PFAM: protein of unknown function DUF72; KEGG: bxe:Bxe_B2045 hypothetical protein; hypothetical protein 2055672..2056592 Burkholderia phytofirmans PsJN 6279121 YP_001889550.1 CDS Bphyt_5843 NC_010676.1 2056913 2057242 D KEGG: bxe:Bxe_B2093 hypothetical protein; hypothetical protein 2056913..2057242 Burkholderia phytofirmans PsJN 6278863 YP_001889551.1 CDS Bphyt_5844 NC_010676.1 2057432 2058340 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mll6935 transcriptional regulator; LysR family transcriptional regulator complement(2057432..2058340) Burkholderia phytofirmans PsJN 6279163 YP_001889552.1 CDS Bphyt_5845 NC_010676.1 2058561 2059088 D KEGG: mlo:mlr6937 hypothetical protein; hypothetical protein 2058561..2059088 Burkholderia phytofirmans PsJN 6277339 YP_001889553.1 CDS Bphyt_5846 NC_010676.1 2059118 2059858 D KEGG: pol:Bpro_4803 hypothetical protein; hypothetical protein 2059118..2059858 Burkholderia phytofirmans PsJN 6279571 YP_001889554.1 CDS Bphyt_5847 NC_010676.1 2060237 2060503 D KEGG: bxe:Bxe_B2057 hypothetical protein; hypothetical protein 2060237..2060503 Burkholderia phytofirmans PsJN 6277344 YP_001889555.1 CDS Bphyt_5848 NC_010676.1 2060547 2061902 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2058 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2060547..2061902) Burkholderia phytofirmans PsJN 6279010 YP_001889556.1 CDS Bphyt_5849 NC_010676.1 2061899 2062612 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B2059 two component transcriptional regulator, winged helix family; two component winged helix family transcriptional regulator complement(2061899..2062612) Burkholderia phytofirmans PsJN 6277348 YP_001889557.1 CDS Bphyt_5850 NC_010676.1 2062634 2065765 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rle:RL4275 putative Acr/RND family efflux transmembrane transporter; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(2062634..2065765) Burkholderia phytofirmans PsJN 6278000 YP_001889558.1 CDS Bphyt_5851 NC_010676.1 2065762 2066871 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr6725 putative multidrug resistance protein; RND family efflux transporter MFP subunit complement(2065762..2066871) Burkholderia phytofirmans PsJN 6278343 YP_001889559.1 CDS Bphyt_5852 NC_010676.1 2066861 2068432 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mca:MCA1362 outer membrane efflux family protein; NodT family RND efflux system outer membrane lipoprotein complement(2066861..2068432) Burkholderia phytofirmans PsJN 6277860 YP_001889560.1 CDS Bphyt_5853 NC_010676.1 2068546 2068836 R KEGG: bxe:Bxe_B2059a hypothetical protein; hypothetical protein complement(2068546..2068836) Burkholderia phytofirmans PsJN 6279017 YP_001889561.1 CDS Bphyt_5854 NC_010676.1 2069247 2069582 D similar to CG10953; KEGG: dme:Dmel_CG10953 CG10953; hypothetical protein 2069247..2069582 Burkholderia phytofirmans PsJN 6278520 YP_001889562.1 CDS Bphyt_5855 NC_010676.1 2069960 2070205 D KEGG: bxe:Bxe_B2061 hypothetical protein; hypothetical protein 2069960..2070205 Burkholderia phytofirmans PsJN 6279395 YP_001889563.1 CDS Bphyt_5856 NC_010676.1 2070275 2071525 R PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: bxe:Bxe_B2062 arsenite-antimonite efflux pump, ArsB; arsenical pump membrane protein complement(2070275..2071525) Burkholderia phytofirmans PsJN 6277385 YP_001889564.1 CDS Bphyt_5857 NC_010676.1 2071659 2072684 R KEGG: bxe:Bxe_B2063 putative diguanylate cyclase (GGDEF domain); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase complement(2071659..2072684) Burkholderia phytofirmans PsJN 6279226 YP_001889565.1 CDS Bphyt_5858 NC_010676.1 2072901 2073455 D PFAM: cytochrome B561; KEGG: bxe:Bxe_B2064 putative cytochrome b-561 membrane protein; cytochrome B561 2072901..2073455 Burkholderia phytofirmans PsJN 6279457 YP_001889566.1 CDS Bphyt_5859 NC_010676.1 2073544 2074119 D PFAM: YceI family protein; KEGG: bxe:Bxe_B2065 hypothetical protein; hypothetical protein 2073544..2074119 Burkholderia phytofirmans PsJN 6280412 YP_001889567.1 CDS Bphyt_5860 NC_010676.1 2074165 2074743 D PFAM: YceI family protein; KEGG: bxe:Bxe_B2066 hypothetical protein; hypothetical protein 2074165..2074743 Burkholderia phytofirmans PsJN 6280523 YP_001889568.1 CDS Bphyt_5861 NC_010676.1 2074858 2075841 R KEGG: mdo:100024594 similar to hCG2041257; hypothetical protein complement(2074858..2075841) Burkholderia phytofirmans PsJN 6278522 YP_001889569.1 CDS Bphyt_5862 NC_010676.1 2076224 2076877 D KEGG: bvi:Bcep1808_7527 hypothetical protein; hypothetical protein 2076224..2076877 Burkholderia phytofirmans PsJN 6280491 YP_001889570.1 CDS Bphyt_5864 NC_010676.1 2077761 2078660 D KEGG: bmu:Bmul_5390 hypothetical protein; hypothetical protein 2077761..2078660 Burkholderia phytofirmans PsJN 6278663 YP_001889571.1 CDS Bphyt_5865 NC_010676.1 2078803 2079723 D PFAM: Auxin Efflux Carrier; KEGG: ppw:PputW619_3829 auxin efflux carrier; auxin efflux carrier 2078803..2079723 Burkholderia phytofirmans PsJN 6279116 YP_001889572.1 CDS Bphyt_5866 NC_010676.1 2079829 2080776 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcm:Bcenmc03_6422 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2079829..2080776) Burkholderia phytofirmans PsJN 6278486 YP_001889573.1 CDS Bphyt_5867 NC_010676.1 2080883 2081617 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B1096 glucose dehydrogenase; short-chain dehydrogenase/reductase SDR 2080883..2081617 Burkholderia phytofirmans PsJN 6277431 YP_001889574.1 CDS Bphyt_5868 NC_010676.1 2081689 2082288 D PFAM: Semialdehyde dehydrogenase NAD - binding; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bxe:Bxe_B1095 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 2081689..2082288 Burkholderia phytofirmans PsJN 6277647 YP_001889575.1 CDS Bphyt_5869 NC_010676.1 2082480 2082896 D KEGG: sus:Acid_4476 protein of unknown function DUF1486; hypothetical protein 2082480..2082896 Burkholderia phytofirmans PsJN 6280557 YP_001889576.1 CDS Bphyt_5870 NC_010676.1 2082912 2084039 R PFAM: aminotransferase class V; KEGG: bxe:Bxe_B0255 putative serine-pyruvate aminotransferase; class V aminotransferase complement(2082912..2084039) Burkholderia phytofirmans PsJN 6279424 YP_001889577.1 CDS Bphyt_5871 NC_010676.1 2084285 2085430 D PFAM: UMUC domain protein DNA-repair protein; KEGG: mpt:Mpe_A1234 DNA-directed DNA polymerase; DNA-directed DNA polymerase 2084285..2085430 Burkholderia phytofirmans PsJN 6277399 YP_001889578.1 CDS Bphyt_5872 NC_010676.1 2085463 2086920 R TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2068 heavy metal sensor signal transduction histidine kinases (STHK); heavy metal sensor signal transduction histidine kinase complement(2085463..2086920) Burkholderia phytofirmans PsJN 6279277 YP_001889579.1 CDS Bphyt_5873 NC_010676.1 2086917 2087603 R TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B2069 two component heavy metal response transcriptional regulator, winged helix family; two component heavy metal response winged helix family transcriptional regulator complement(2086917..2087603) Burkholderia phytofirmans PsJN 6277570 YP_001889580.1 CDS Bphyt_5874 NC_010676.1 2087703 2089199 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B2070 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein complement(2087703..2089199) Burkholderia phytofirmans PsJN 6277464 YP_001889581.1 CDS Bphyt_5875 NC_010676.1 2089196 2090419 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B2071 RND efflux pump, membrane fusion protein, CzcB subfamily; RND family efflux transporter MFP subunit complement(2089196..2090419) Burkholderia phytofirmans PsJN 6277510 YP_001889582.1 CDS Bphyt_5876 NC_010676.1 2090455 2093703 R PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B2072 cation/multidrug efflux pump, AcrB/AcrD/AcrF family, RND superfamily; acriflavin resistance protein complement(2090455..2093703) Burkholderia phytofirmans PsJN 6280346 YP_001889583.1 CDS Bphyt_5877 NC_010676.1 2094027 2094461 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B2073 glyoxalase/bleomycin resistanceprotein/dioxygenase superfamily protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(2094027..2094461) Burkholderia phytofirmans PsJN 6277636 YP_001889584.1 CDS Bphyt_5878 NC_010676.1 2094607 2095491 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2074 transcriptional regulator, LysR family; LysR family transcriptional regulator 2094607..2095491 Burkholderia phytofirmans PsJN 6277515 YP_001889585.1 CDS Bphyt_5879 NC_010676.1 2095656 2096294 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B2075 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA 2095656..2096294 Burkholderia phytofirmans PsJN 6278815 YP_001889586.1 CDS Bphyt_5880 NC_010676.1 2096364 2096711 D KEGG: bxe:Bxe_B2076 hypothetical protein; hypothetical protein 2096364..2096711 Burkholderia phytofirmans PsJN 6279495 YP_001889587.1 CDS Bphyt_5881 NC_010676.1 2096760 2098472 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: bxe:Bxe_B2077 sulfate transporter with antisigma-factor antagonist (STAS) domain; sulfate transporter complement(2096760..2098472) Burkholderia phytofirmans PsJN 6278517 YP_001889588.1 CDS Bphyt_5882 NC_010676.1 2099181 2100038 D PFAM: protein of unknown function RIO1; KEGG: bxe:Bxe_B2078 hypothetical protein; hypothetical protein 2099181..2100038 Burkholderia phytofirmans PsJN 6278868 YP_001889589.1 CDS Bphyt_5883 NC_010676.1 2100100 2101143 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B2079 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(2100100..2101143) Burkholderia phytofirmans PsJN 6277563 YP_001889590.1 CDS Bphyt_5884 NC_010676.1 2101194 2102375 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2080 ABC sugar transporter, ATPase subunit; ABC transporter-like protein complement(2101194..2102375) Burkholderia phytofirmans PsJN 6277564 YP_001889591.1 CDS Bphyt_5885 NC_010676.1 2102380 2103300 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2081 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2102380..2103300) Burkholderia phytofirmans PsJN 6277419 YP_001889592.1 CDS Bphyt_5886 NC_010676.1 2103300 2104244 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2082 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2103300..2104244) Burkholderia phytofirmans PsJN 6277611 YP_001889593.1 CDS Bphyt_5887 NC_010676.1 2104254 2105492 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2083 ABC sugar transporter, periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(2104254..2105492) Burkholderia phytofirmans PsJN 6279203 YP_001889594.1 CDS Bphyt_5888 NC_010676.1 2105578 2106990 R KEGG: bxe:Bxe_B2084 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; beta-galactosidase complement(2105578..2106990) Burkholderia phytofirmans PsJN 6277336 YP_001889595.1 CDS Bphyt_5889 NC_010676.1 2107267 2108481 R KEGG: bxe:Bxe_B2085 hypothetical protein; hypothetical protein complement(2107267..2108481) Burkholderia phytofirmans PsJN 6278886 YP_001889596.1 CDS ftrA NC_010676.1 2108645 2109610 R upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism; transcriptional activator FtrA complement(2108645..2109610) Burkholderia phytofirmans PsJN 6279543 YP_001889597.1 CDS Bphyt_5891 NC_010676.1 2109729 2110169 R PFAM: Rhodanese domain protein; KEGG: bxe:Bxe_B2088 hypothetical protein; rhodanese domain-containing protein complement(2109729..2110169) Burkholderia phytofirmans PsJN 6279423 YP_001889598.1 CDS Bphyt_5892 NC_010676.1 2110642 2111817 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B2400 outer membrane porin, OmpC family; porin 2110642..2111817 Burkholderia phytofirmans PsJN 6277525 YP_001889599.1 CDS Bphyt_5893 NC_010676.1 2111904 2112644 R KEGG: rso:RSc1547 hypothetical protein; hypothetical protein complement(2111904..2112644) Burkholderia phytofirmans PsJN 6277531 YP_001889600.1 CDS Bphyt_5894 NC_010676.1 2112831 2114900 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: bxe:Bxe_B2102 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 2112831..2114900 Burkholderia phytofirmans PsJN 6277590 YP_001889601.1 CDS Bphyt_5895 NC_010676.1 2115027 2115833 D KEGG: bxe:Bxe_B2103 hypothetical protein; hypothetical protein 2115027..2115833 Burkholderia phytofirmans PsJN 6279655 YP_001889602.1 CDS Bphyt_5896 NC_010676.1 2115858 2116292 R PFAM: protein of unknown function DUF583; KEGG: bxe:Bxe_B2104 hypothetical protein; hypothetical protein complement(2115858..2116292) Burkholderia phytofirmans PsJN 6277472 YP_001889603.1 CDS Bphyt_5897 NC_010676.1 2116468 2116866 R KEGG: bxe:Bxe_B2105 hypothetical protein; hypothetical protein complement(2116468..2116866) Burkholderia phytofirmans PsJN 6279679 YP_001889604.1 CDS Bphyt_5898 NC_010676.1 2116859 2117857 R PFAM: Peptidase M23; KEGG: bxe:Bxe_B2106 putative peptidase, M23/M37 family; peptidase M23 complement(2116859..2117857) Burkholderia phytofirmans PsJN 6280324 YP_001889605.1 CDS Bphyt_5899 NC_010676.1 2118289 2119212 R TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B2107 dihydrodipicolinate synthase family; dihydrodipicolinate synthase complement(2118289..2119212) Burkholderia phytofirmans PsJN 6277843 YP_001889606.1 CDS Bphyt_5900 NC_010676.1 2119598 2120890 D catalyzes the conversion of carbamoyl phosphate and aspartate to form N-carbamoyl aspartate; aspartate carbamoyltransferase 2119598..2120890 Burkholderia phytofirmans PsJN 6278942 YP_001889607.1 CDS Bphyt_5901 NC_010676.1 2120943 2121794 R PFAM: putative esterase; KEGG: bxe:Bxe_B2109 putative esterase; esterase complement(2120943..2121794) Burkholderia phytofirmans PsJN 6278580 YP_001889608.1 CDS Bphyt_5902 NC_010676.1 2122345 2122836 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_B1488 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2122345..2122836) Burkholderia phytofirmans PsJN 6279390 YP_001889609.1 CDS Bphyt_5903 NC_010676.1 2123176 2123844 D TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bvi:Bcep1808_6425 haloacid dehalogenase, type II; type II haloacid dehalogenase 2123176..2123844 Burkholderia phytofirmans PsJN 6279260 YP_001889610.1 CDS Bphyt_5904 NC_010676.1 2123992 2125086 D PFAM: aminoglycoside phosphotransferase; KEGG: mrd:Mrad2831_3215 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2123992..2125086 Burkholderia phytofirmans PsJN 6277567 YP_001889611.1 CDS Bphyt_5905 NC_010676.1 2125129 2126526 D PFAM: aminotransferase class-III; KEGG: sme:SMa1761 putative aminotransferase; class III aminotransferase 2125129..2126526 Burkholderia phytofirmans PsJN 6277439 YP_001889612.1 CDS Bphyt_5906 NC_010676.1 2126717 2127451 D PFAM: protein of unknown function DUF861 cupin_3; KEGG: bam:Bamb_6360 protein of unknown function DUF861, cupin_3; hypothetical protein 2126717..2127451 Burkholderia phytofirmans PsJN 6277433 YP_001889613.1 CDS Bphyt_5907 NC_010676.1 2127454 2128779 D PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_6361 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2127454..2128779 Burkholderia phytofirmans PsJN 6277409 YP_001889614.1 CDS Bphyt_5908 NC_010676.1 2128951 2130228 R PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_6362 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2128951..2130228) Burkholderia phytofirmans PsJN 6277631 YP_001889615.1 CDS Bphyt_5909 NC_010676.1 2130269 2130673 R PFAM: Endoribonuclease L-PSP; KEGG: bxe:Bxe_A0900 hypothetical protein; endoribonuclease L-PSP complement(2130269..2130673) Burkholderia phytofirmans PsJN 6277508 YP_001889616.1 CDS Bphyt_5910 NC_010676.1 2130874 2131794 D PFAM: regulatory protein LysR; helix-turn-helix Fis-type; LysR substrate-binding; KEGG: bam:Bamb_5304 transcriptional regulator, LysR family; LysR family transcriptional regulator 2130874..2131794 Burkholderia phytofirmans PsJN 6279895 YP_001889617.1 CDS Bphyt_5911 NC_010676.1 2131893 2132771 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B2112 oxidoreductase; oxidoreductase complement(2131893..2132771) Burkholderia phytofirmans PsJN 6280209 YP_001889618.1 CDS Bphyt_5912 NC_010676.1 2132842 2133774 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2113 transcriptional regulator, LysR family; LysR family transcriptional regulator 2132842..2133774 Burkholderia phytofirmans PsJN 6277607 YP_001889619.1 CDS Bphyt_5913 NC_010676.1 2133873 2134364 R PFAM: response regulator receiver; KEGG: bcm:Bcenmc03_1106 response regulator receiver protein; response regulator receiver protein complement(2133873..2134364) Burkholderia phytofirmans PsJN 6278611 YP_001889620.1 CDS Bphyt_5914 NC_010676.1 2134512 2135729 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2114 signal transduction histidine kinase; histidine kinase 2134512..2135729 Burkholderia phytofirmans PsJN 6277390 YP_001889621.1 CDS Bphyt_5915 NC_010676.1 2135753 2136241 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B2461 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2135753..2136241 Burkholderia phytofirmans PsJN 6277518 YP_001889622.1 CDS Bphyt_5916 NC_010676.1 2136682 2137755 R KEGG: bxe:Bxe_B2116 hypothetical protein; hypothetical protein complement(2136682..2137755) Burkholderia phytofirmans PsJN 6279527 YP_001889623.1 CDS Bphyt_5917 NC_010676.1 2138044 2139030 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(2138044..2139030) Burkholderia phytofirmans PsJN 6277359 YP_001889624.1 CDS Bphyt_5918 NC_010676.1 2139032 2140144 R PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; Thioesterase; KEGG: bxe:Bxe_B0315 branched-chain alpha-keto acid dehydrogenase subunit E2; branched-chain alpha-keto acid dehydrogenase E2 subunit complement(2139032..2140144) Burkholderia phytofirmans PsJN 6277393 YP_001889625.1 CDS Bphyt_5919 NC_010676.1 2140148 2141152 R PFAM: Transketolase central region; Transketolase domain protein; KEGG: bxe:Bxe_B0314 acetoin dehydrogenase, beta subunit; transketolase central region complement(2140148..2141152) Burkholderia phytofirmans PsJN 6277364 YP_001889626.1 CDS Bphyt_5920 NC_010676.1 2141192 2142175 R PFAM: dehydrogenase E1 component; KEGG: bxe:Bxe_B0313 pyruvate dehydrogenase (lipoamide); pyruvate dehydrogenase complement(2141192..2142175) Burkholderia phytofirmans PsJN 6278753 YP_001889627.1 CDS Bphyt_5921 NC_010676.1 2142216 2143280 R PFAM: ATP-NAD/AcoX kinase; KEGG: bxe:Bxe_B0312 putative acetoin catabolism protein; ATP-NAD/AcoX kinase complement(2142216..2143280) Burkholderia phytofirmans PsJN 6278038 YP_001889628.1 CDS Bphyt_5922 NC_010676.1 2143695 2145695 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0310 sigma54 specific transcriptional regulator with GAF sensor, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator 2143695..2145695 Burkholderia phytofirmans PsJN 6277362 YP_001889629.1 CDS Bphyt_5923 NC_010676.1 2146043 2146423 D KEGG: bxe:Bxe_B2164 hypothetical protein; hypothetical protein 2146043..2146423 Burkholderia phytofirmans PsJN 6277629 YP_001889630.1 CDS Bphyt_5924 NC_010676.1 2146575 2147147 R KEGG: bxe:Bxe_B2165 hypothetical protein; hypothetical protein complement(2146575..2147147) Burkholderia phytofirmans PsJN 6278395 YP_001889631.1 CDS Bphyt_5925 NC_010676.1 2147661 2148863 R catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase complement(2147661..2148863) Burkholderia phytofirmans PsJN 6279341 YP_001889632.1 CDS Bphyt_5926 NC_010676.1 2149244 2150224 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: bxe:Bxe_B2168 hypothetical protein; NAD-dependent epimerase/dehydratase complement(2149244..2150224) Burkholderia phytofirmans PsJN 6280518 YP_001889633.1 CDS Bphyt_5927 NC_010676.1 2150241 2151029 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bxe:Bxe_B2169 hydroxypyruvate isomerase; hydroxypyruvate isomerase complement(2150241..2151029) Burkholderia phytofirmans PsJN 6280405 YP_001889634.1 CDS Bphyt_5928 NC_010676.1 2151099 2152436 R PFAM: major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_5121 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2151099..2152436) Burkholderia phytofirmans PsJN 6278341 YP_001889635.1 CDS Bphyt_5929 NC_010676.1 2152524 2153186 R PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B2170 putative aldolase; aldolase complement(2152524..2153186) Burkholderia phytofirmans PsJN 6277956 YP_001889636.1 CDS Bphyt_5930 NC_010676.1 2153183 2154493 R PFAM: type III effector Hrp-dependent outers; KEGG: bxe:Bxe_B2171 hypothetical protein; Hrp-dependent type III effector protein complement(2153183..2154493) Burkholderia phytofirmans PsJN 6278566 YP_001889637.1 CDS Bphyt_5931 NC_010676.1 2154507 2155397 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_B2172 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase complement(2154507..2155397) Burkholderia phytofirmans PsJN 6278957 YP_001889638.1 CDS Bphyt_5932 NC_010676.1 2155464 2156168 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B2173 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2155464..2156168) Burkholderia phytofirmans PsJN 6278225 YP_001889639.1 CDS Bphyt_5933 NC_010676.1 2156372 2157196 D TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B2174 transcriptional regulator, IclR family; IclR family transcriptional regulator 2156372..2157196 Burkholderia phytofirmans PsJN 6279335 YP_001889640.1 CDS Bphyt_5934 NC_010676.1 2157249 2158550 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0253 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein complement(2157249..2158550) Burkholderia phytofirmans PsJN 6278241 YP_001889641.1 CDS Bphyt_5935 NC_010676.1 2158617 2159807 R KEGG: bxe:Bxe_B2175 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(2158617..2159807) Burkholderia phytofirmans PsJN 6277620 YP_001889642.1 CDS Bphyt_5936 NC_010676.1 2159941 2160849 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpd:BURPS668_A0475 transcriptional regulator, LysR family; LysR family transcriptional regulator 2159941..2160849 Burkholderia phytofirmans PsJN 6278255 YP_001889643.1 CDS Bphyt_5937 NC_010676.1 2160856 2161410 R TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: bxe:Bxe_B2176 putative phosphonate metabolism protein; phosphonate metabolism protein/1,5-bisphosphokinase PhnN complement(2160856..2161410) Burkholderia phytofirmans PsJN 6279249 YP_001889644.1 CDS Bphyt_5938 NC_010676.1 2161413 2162135 R TIGRFAM: phosphonate metabolism protein; PFAM: protein of unknown function DUF1045; KEGG: bxe:Bxe_B2177 hypothetical protein; phosphonate metabolism protein complement(2161413..2162135) Burkholderia phytofirmans PsJN 6280037 YP_001889645.1 CDS Bphyt_5939 NC_010676.1 2162132 2162890 R TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_B2178 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2162132..2162890) Burkholderia phytofirmans PsJN 6280014 YP_001889646.1 CDS Bphyt_5940 NC_010676.1 2163133 2163570 D TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: bxe:Bxe_B2179 putative phosphonate metabolism protein PhnG; phosphonate C-P lyase system protein PhnG 2163133..2163570 Burkholderia phytofirmans PsJN 6278294 YP_001889647.1 CDS phnH NC_010676.1 2163570 2164193 D TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: bxe:Bxe_B2180 carbon-phosphorus lyase complex subunit; carbon-phosphorus lyase complex subunit 2163570..2164193 Burkholderia phytofirmans PsJN 6280410 YP_001889648.1 CDS Bphyt_5942 NC_010676.1 2164193 2165338 D PFAM: phosphonate metabolism; KEGG: bxe:Bxe_B2181 alkylphosphonate utilization operon protein PhnI; phosphonate metabolism protein 2164193..2165338 Burkholderia phytofirmans PsJN 6277883 YP_001889649.1 CDS Bphyt_5943 NC_010676.1 2165335 2166267 D PFAM: phosphonate metabolism PhnJ; KEGG: bxe:Bxe_B2182 putative phosphonate metabolism PhnJ protein; phosphonate metabolism PhnJ 2165335..2166267 Burkholderia phytofirmans PsJN 6277653 YP_001889650.1 CDS phnK NC_010676.1 2166264 2167034 D KEGG: bxe:Bxe_B2183 phosphonates transport ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK 2166264..2167034 Burkholderia phytofirmans PsJN 6279343 YP_001889651.1 CDS Bphyt_5945 NC_010676.1 2167043 2167807 D KEGG: bxe:Bxe_B2184 ABC phophonate transporter, ATPase subunit PhnL; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL 2167043..2167807 Burkholderia phytofirmans PsJN 6277648 YP_001889652.1 CDS Bphyt_5946 NC_010676.1 2167927 2169060 D TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; KEGG: bxe:Bxe_B2185 putative phosphonate metabolism protein PhnM; phosphonate metabolism protein PhnM 2167927..2169060 Burkholderia phytofirmans PsJN 6277340 YP_001889653.1 CDS Bphyt_5948 NC_010676.1 2169666 2170019 R KEGG: rso:RSc2895 hypothetical signal peptide protein; hypothetical protein complement(2169666..2170019) Burkholderia phytofirmans PsJN 6279690 YP_001889654.1 CDS Bphyt_5949 NC_010676.1 2170031 2170339 R KEGG: rso:RSc2894 hypothetical protein; hypothetical protein complement(2170031..2170339) Burkholderia phytofirmans PsJN 6279829 YP_001889655.1 CDS Bphyt_5950 NC_010676.1 2170736 2172550 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bxe:Bxe_B2186 putative diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(2170736..2172550) Burkholderia phytofirmans PsJN 6279623 YP_001889656.1 CDS Bphyt_5951 NC_010676.1 2172550 2173698 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2187 ABC spermidine/putrescine transporter, periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(2172550..2173698) Burkholderia phytofirmans PsJN 6277863 YP_001889657.1 CDS Bphyt_5952 NC_010676.1 2174191 2174442 D KEGG: bxe:Bxe_B2188 hypothetical protein; hypothetical protein 2174191..2174442 Burkholderia phytofirmans PsJN 6278258 YP_001889658.1 CDS Bphyt_5953 NC_010676.1 2174824 2175606 D TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B2189 ABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein; cationic amino acid ABC transporter periplasmic binding protein 2174824..2175606 Burkholderia phytofirmans PsJN 6277940 YP_001889659.1 CDS Bphyt_5954 NC_010676.1 2175865 2176980 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bxe:Bxe_B2190 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 2175865..2176980 Burkholderia phytofirmans PsJN 6279482 YP_001889660.1 CDS Bphyt_5955 NC_010676.1 2177395 2178549 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B2192 outer membrane porin, OmpC family; porin 2177395..2178549 Burkholderia phytofirmans PsJN 6277450 YP_001889661.1 CDS Bphyt_5956 NC_010676.1 2178769 2179584 D PFAM: class II aldolase/adducin family protein; KEGG: pfo:Pfl_3900 hypothetical protein; aldolase II superfamily protein 2178769..2179584 Burkholderia phytofirmans PsJN 6279945 YP_001889662.1 CDS Bphyt_5957 NC_010676.1 2179711 2180283 R PFAM: OsmC family protein; KEGG: bam:Bamb_6453 OsmC family protein; OsmC family protein complement(2179711..2180283) Burkholderia phytofirmans PsJN 6277612 YP_001889663.1 CDS Bphyt_5958 NC_010676.1 2180769 2182289 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gur:Gura_0526 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 2180769..2182289 Burkholderia phytofirmans PsJN 6279486 YP_001889664.1 CDS Bphyt_5959 NC_010676.1 2182363 2183514 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gur:Gura_0527 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2182363..2183514 Burkholderia phytofirmans PsJN 6279431 YP_001889665.1 CDS Bphyt_5960 NC_010676.1 2183527 2186580 D PFAM: acriflavin resistance protein; KEGG: cvi:CV_1626 probable multidrug efflux protein; acriflavin resistance protein 2183527..2186580 Burkholderia phytofirmans PsJN 6278619 YP_001889666.1 CDS Bphyt_5961 NC_010676.1 2186612 2188105 R PFAM: phosphoesterase; KEGG: bmu:Bmul_6095 phosphoesterase; phosphoesterase complement(2186612..2188105) Burkholderia phytofirmans PsJN 6279244 YP_001889667.1 CDS Bphyt_5962 NC_010676.1 2188377 2189252 D PFAM: extracellular solute-binding protein family 3; KEGG: bcm:Bcenmc03_2190 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2188377..2189252 Burkholderia phytofirmans PsJN 6277413 YP_001889668.1 CDS Bphyt_5963 NC_010676.1 2189363 2189932 D KEGG: bxe:Bxe_B2198 hypothetical protein; hypothetical protein 2189363..2189932 Burkholderia phytofirmans PsJN 6280303 YP_001889669.1 CDS Bphyt_5964 NC_010676.1 2190108 2190476 D KEGG: bxe:Bxe_B2199 hypothetical protein; hypothetical protein 2190108..2190476 Burkholderia phytofirmans PsJN 6277641 YP_001889670.1 CDS Bphyt_5965 NC_010676.1 2190730 2191821 D KEGG: bxe:Bxe_B2200 hypothetical protein; hypothetical protein 2190730..2191821 Burkholderia phytofirmans PsJN 6277543 YP_001889671.1 CDS Bphyt_5966 NC_010676.1 2191925 2194378 R KEGG: bxe:Bxe_B2201 phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase complement(2191925..2194378) Burkholderia phytofirmans PsJN 6279509 YP_001889672.1 CDS Bphyt_5967 NC_010676.1 2195127 2196494 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2203 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein 2195127..2196494 Burkholderia phytofirmans PsJN 6277465 YP_001889673.1 CDS Bphyt_5968 NC_010676.1 2196622 2197629 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; KEGG: bxe:Bxe_B2204 threonine aldolase; threonine aldolase complement(2196622..2197629) Burkholderia phytofirmans PsJN 6278059 YP_001889674.1 CDS Bphyt_5969 NC_010676.1 2197778 2198563 R PFAM: Peptidoglycan-binding LysM; Peptidase M23; KEGG: bxe:Bxe_B2205 putative lipoprotein; peptidase M23 complement(2197778..2198563) Burkholderia phytofirmans PsJN 6279652 YP_001889675.1 CDS Bphyt_5970 NC_010676.1 2198719 2199030 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B2206 hypothetical protein; cupin complement(2198719..2199030) Burkholderia phytofirmans PsJN 6279468 YP_001889676.1 CDS Bphyt_5971 NC_010676.1 2199282 2199602 D KEGG: bxe:Bxe_B2207 hypothetical protein; hypothetical protein 2199282..2199602 Burkholderia phytofirmans PsJN 6277624 YP_001889677.1 CDS Bphyt_5972 NC_010676.1 2199897 2200214 R KEGG: bxe:Bxe_B2209 hypothetical protein; hypothetical protein complement(2199897..2200214) Burkholderia phytofirmans PsJN 6277806 YP_001889678.1 CDS Bphyt_5973 NC_010676.1 2200482 2201891 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(2200482..2201891) Burkholderia phytofirmans PsJN 6278932 YP_001889679.1 CDS Bphyt_5974 NC_010676.1 2202070 2202702 R PFAM: protein of unknown function DUF938; Methyltransferase type 11; KEGG: bxe:Bxe_B2211 hypothetical protein; hypothetical protein complement(2202070..2202702) Burkholderia phytofirmans PsJN 6277406 YP_001889680.1 CDS Bphyt_5976 NC_010676.1 2203363 2204241 R PFAM: Silent information regulator protein Sir2; KEGG: bxe:Bxe_B2213 silent information regulator protein Sir2; silent information regulator protein Sir2 complement(2203363..2204241) Burkholderia phytofirmans PsJN 6279291 YP_001889681.1 CDS Bphyt_5977 NC_010676.1 2204285 2204509 R KEGG: bur:Bcep18194_B0917 hypothetical protein; hypothetical protein complement(2204285..2204509) Burkholderia phytofirmans PsJN 6277412 YP_001889682.1 CDS Bphyt_5978 NC_010676.1 2204587 2205351 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2214 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2204587..2205351) Burkholderia phytofirmans PsJN 6277614 YP_001889683.1 CDS Bphyt_5979 NC_010676.1 2205571 2206428 D PFAM: polysaccharide deacetylase; KEGG: bxe:Bxe_B2215 putative transmembrane protein; polysaccharide deacetylase 2205571..2206428 Burkholderia phytofirmans PsJN 6279629 YP_001889684.1 CDS Bphyt_5980 NC_010676.1 2206507 2207919 R KEGG: bxe:Bxe_B2216 hypothetical protein; hypothetical protein complement(2206507..2207919) Burkholderia phytofirmans PsJN 6277675 YP_001889685.1 CDS Bphyt_5981 NC_010676.1 2208008 2209021 R KEGG: bxe:Bxe_B2217 hypothetical protein; hypothetical protein complement(2208008..2209021) Burkholderia phytofirmans PsJN 6279268 YP_001889686.1 CDS Bphyt_5982 NC_010676.1 2209448 2210317 D KEGG: bur:Bcep18194_B2790 flagellar motor component-like; flagellar motor component-like protein 2209448..2210317 Burkholderia phytofirmans PsJN 6278585 YP_001889687.1 CDS Bphyt_5983 NC_010676.1 2210332 2211321 D PFAM: OmpA/MotB domain protein; KEGG: bur:Bcep18194_B2791 outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein 2210332..2211321 Burkholderia phytofirmans PsJN 6277984 YP_001889688.1 CDS Bphyt_5984 NC_010676.1 2211408 2212091 D KEGG: bxe:Bxe_B2219 hypothetical protein; hypothetical protein 2211408..2212091 Burkholderia phytofirmans PsJN 6279980 YP_001889689.1 CDS Bphyt_5985 NC_010676.1 2212263 2212550 D KEGG: bxe:Bxe_B2220 hypothetical protein; hypothetical protein 2212263..2212550 Burkholderia phytofirmans PsJN 6277415 YP_001889690.1 CDS Bphyt_5986 NC_010676.1 2212687 2213499 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bxe:Bxe_B2221 exodeoxyribonucleaseIII xth; exodeoxyribonuclease III Xth complement(2212687..2213499) Burkholderia phytofirmans PsJN 6277550 YP_001889691.1 CDS Bphyt_5987 NC_010676.1 2213523 2213741 R KEGG: bxe:Bxe_B2222 hypothetical protein; hypothetical protein complement(2213523..2213741) Burkholderia phytofirmans PsJN 6280556 YP_001889692.1 CDS Bphyt_5988 NC_010676.1 2213904 2216027 R KEGG: bxe:Bxe_B2223 putative D-(-)-3-hydroxybutyrate-oligomer hydrolase; D-(-)-3-hydroxybutyrate-oligomer hydrolase complement(2213904..2216027) Burkholderia phytofirmans PsJN 6277461 YP_001889693.1 CDS Bphyt_5989 NC_010676.1 2216171 2216896 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_B2224 2Fe-2S ferredoxin; (2Fe-2S)-binding domain-containing protein 2216171..2216896 Burkholderia phytofirmans PsJN 6280450 YP_001889694.1 CDS Bphyt_5990 NC_010676.1 2216909 2217910 D PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_B2225 oxidoreductase; FAD-binding molybdopterin dehydrogenase 2216909..2217910 Burkholderia phytofirmans PsJN 6278344 YP_001889695.1 CDS Bphyt_5991 NC_010676.1 2217907 2220129 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B2226 xanthine dehydrogenase; xanthine dehydrogenase 2217907..2220129 Burkholderia phytofirmans PsJN 6278596 YP_001889696.1 CDS Bphyt_5992 NC_010676.1 2220254 2220841 D KEGG: bxe:Bxe_B2227 hypothetical protein; hypothetical protein 2220254..2220841 Burkholderia phytofirmans PsJN 6277298 YP_001889697.1 CDS Bphyt_5993 NC_010676.1 2220938 2221486 R PFAM: thioesterase superfamily protein; KEGG: dac:Daci_1900 thioesterase superfamily protein; thioesterase superfamily protein complement(2220938..2221486) Burkholderia phytofirmans PsJN 6279089 YP_001889698.1 CDS Bphyt_5994 NC_010676.1 2221842 2223482 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: bxe:Bxe_B2228 hypothetical protein; uracil-DNA glycosylase superfamily 2221842..2223482 Burkholderia phytofirmans PsJN 6280505 YP_001889699.1 CDS Bphyt_5995 NC_010676.1 2223947 2224651 D PFAM: LmbE family protein; KEGG: bxe:Bxe_B2231 hypothetical protein; LmbE family protein 2223947..2224651 Burkholderia phytofirmans PsJN 6279069 YP_001889700.1 CDS Bphyt_5996 NC_010676.1 2224662 2224904 D KEGG: bxe:Bxe_B2232 hypothetical protein; hypothetical protein 2224662..2224904 Burkholderia phytofirmans PsJN 6280361 YP_001889701.1 CDS Bphyt_5997 NC_010676.1 2224938 2226005 R TIGRFAM: 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bxe:Bxe_B2233 putative aminotransferase class-V; 2-aminoethylphosphonate aminotransferase complement(2224938..2226005) Burkholderia phytofirmans PsJN 6278756 YP_001889702.1 CDS Bphyt_5998 NC_010676.1 2226021 2227184 R TIGRFAM: phosphonopyruvate decarboxylase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bxe:Bxe_B2234 putative thiamine pyrophosphate enzyme; phosphonopyruvate decarboxylase complement(2226021..2227184) Burkholderia phytofirmans PsJN 6280416 YP_001889703.1 CDS Bphyt_5999 NC_010676.1 2227181 2228926 R TIGRFAM: phosphoenolpyruvate phosphomutase; KEGG: bxe:Bxe_B2235 PepM; phosphoenolpyruvate phosphomutase complement(2227181..2228926) Burkholderia phytofirmans PsJN 6279276 YP_001889704.1 CDS Bphyt_6000 NC_010676.1 2229530 2231071 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bxe:Bxe_B2237 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2229530..2231071 Burkholderia phytofirmans PsJN 6278672 YP_001889705.1 CDS Bphyt_6002 NC_010676.1 2232132 2233865 D PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bxe:Bxe_B2238 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 2232132..2233865 Burkholderia phytofirmans PsJN 6280276 YP_001889706.1 CDS Bphyt_6003 NC_010676.1 2234036 2235151 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B2239 putative diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(2234036..2235151) Burkholderia phytofirmans PsJN 6279812 YP_001889707.1 CDS Bphyt_6004 NC_010676.1 2235425 2235682 D KEGG: bxe:Bxe_B2240 hypothetical protein; hypothetical protein 2235425..2235682 Burkholderia phytofirmans PsJN 6280230 YP_001889708.1 CDS Bphyt_6005 NC_010676.1 2235722 2236360 R PFAM: DSBA oxidoreductase; KEGG: bxe:Bxe_B2241 putative 2-hydroxychromene-2-carboxylate isomerase family protein; DSBA oxidoreductase complement(2235722..2236360) Burkholderia phytofirmans PsJN 6279569 YP_001889709.1 CDS Bphyt_6006 NC_010676.1 2236439 2236561 D hypothetical protein 2236439..2236561 Burkholderia phytofirmans PsJN 6279409 YP_001889710.1 CDS Bphyt_6007 NC_010676.1 2236669 2237037 D KEGG: bxe:Bxe_B2242 hypothetical protein; hypothetical protein 2236669..2237037 Burkholderia phytofirmans PsJN 6280320 YP_001889711.1 CDS Bphyt_6008 NC_010676.1 2237089 2237715 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B2243 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA complement(2237089..2237715) Burkholderia phytofirmans PsJN 6279763 YP_001889712.1 CDS Bphyt_6009 NC_010676.1 2237876 2238595 D PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: bxe:Bxe_B2244 hypothetical protein; hypothetical protein 2237876..2238595 Burkholderia phytofirmans PsJN 6279574 YP_001889713.1 CDS Bphyt_6010 NC_010676.1 2238780 2239364 D KEGG: bxe:Bxe_B2245 hypothetical protein; hypothetical protein 2238780..2239364 Burkholderia phytofirmans PsJN 6280070 YP_001889714.1 CDS Bphyt_6011 NC_010676.1 2239478 2240098 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B2246 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA 2239478..2240098 Burkholderia phytofirmans PsJN 6279967 YP_001889715.1 CDS Bphyt_6012 NC_010676.1 2240112 2240531 R KEGG: bxe:Bxe_B2247 putative hexapeptide transferase family protein; hexapeptide transferase family protein complement(2240112..2240531) Burkholderia phytofirmans PsJN 6279463 YP_001889716.1 CDS Bphyt_6013 NC_010676.1 2240575 2241279 R TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: bxe:Bxe_B2248 glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(2240575..2241279) Burkholderia phytofirmans PsJN 6277613 YP_001889717.1 CDS Bphyt_6014 NC_010676.1 2241371 2242177 R KEGG: bxe:Bxe_B2249 hypothetical protein; hypothetical protein complement(2241371..2242177) Burkholderia phytofirmans PsJN 6278450 YP_001889718.1 CDS Bphyt_6015 NC_010676.1 2242183 2243337 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_B2250 putative glycosyltransferase; group 1 glycosyl transferase complement(2242183..2243337) Burkholderia phytofirmans PsJN 6280140 YP_001889719.1 CDS Bphyt_6016 NC_010676.1 2243330 2244637 R KEGG: bxe:Bxe_B2251 hypothetical protein; hypothetical protein complement(2243330..2244637) Burkholderia phytofirmans PsJN 6280254 YP_001889720.1 CDS Bphyt_6017 NC_010676.1 2244630 2245457 R PFAM: glycosyl transferase family 25; KEGG: bxe:Bxe_B2251a hypothetical protein; glycosyl transferase complement(2244630..2245457) Burkholderia phytofirmans PsJN 6277306 YP_001889721.1 CDS Bphyt_6018 NC_010676.1 2245454 2246755 R PFAM: polysaccharide biosynthesis protein; KEGG: bxe:Bxe_B2253 putative lipopolysaccharide (O-antigen)exporter, PST family, MOP superfamily; polysaccharide biosynthesis protein complement(2245454..2246755) Burkholderia phytofirmans PsJN 6278799 YP_001889722.1 CDS wecC NC_010676.1 2246794 2248038 R catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase complement(2246794..2248038) Burkholderia phytofirmans PsJN 6278524 YP_001889723.1 CDS Bphyt_6020 NC_010676.1 2248178 2250388 R KEGG: bxe:Bxe_B2255 protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein complement(2248178..2250388) Burkholderia phytofirmans PsJN 6278004 YP_001889724.1 CDS Bphyt_6021 NC_010676.1 2250392 2250829 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bxe:Bxe_B2256 putative protein tyrosine phosphatase; protein tyrosine phosphatase complement(2250392..2250829) Burkholderia phytofirmans PsJN 6279473 YP_001889725.1 CDS Bphyt_6022 NC_010676.1 2250826 2251980 R PFAM: polysaccharide export protein; KEGG: bxe:Bxe_B2257 putative outer membrane polysaccharide exporter; polysaccharide export protein complement(2250826..2251980) Burkholderia phytofirmans PsJN 6279538 YP_001889726.1 CDS Bphyt_6023 NC_010676.1 2252181 2253596 R TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bxe:Bxe_B2258 putative sugar transferase; undecaprenyl-phosphate glucose phosphotransferase complement(2252181..2253596) Burkholderia phytofirmans PsJN 6279943 YP_001889727.1 CDS Bphyt_6024 NC_010676.1 2254041 2255018 D KEGG: bxe:Bxe_B2259 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 2254041..2255018 Burkholderia phytofirmans PsJN 6278151 YP_001889728.1 CDS Bphyt_6025 NC_010676.1 2255124 2256575 R PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B2260 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase complement(2255124..2256575) Burkholderia phytofirmans PsJN 6280562 YP_001889729.1 CDS Bphyt_6026 NC_010676.1 2256638 2257609 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2261 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2256638..2257609) Burkholderia phytofirmans PsJN 6278818 YP_001889730.1 CDS Bphyt_6027 NC_010676.1 2257639 2258982 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2262 putative major facilitator superfamily (MFS)oxalate/formate antiporter; major facilitator superfamily protein complement(2257639..2258982) Burkholderia phytofirmans PsJN 6279749 YP_001889731.1 CDS Bphyt_6028 NC_010676.1 2259392 2260339 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2263 transcriptional regulator, LysR family; LysR family transcriptional regulator 2259392..2260339 Burkholderia phytofirmans PsJN 6279481 YP_001889732.1 CDS Bphyt_6029 NC_010676.1 2260436 2260741 D KEGG: bxe:Bxe_B2264 hypothetical protein; hypothetical protein 2260436..2260741 Burkholderia phytofirmans PsJN 6278505 YP_001889733.1 CDS Bphyt_6030 NC_010676.1 2260804 2261715 R PFAM: NAD(P) transhydrogenase beta subunit; KEGG: bxe:Bxe_B2265 putative NAD(P) transhydrogenase, beta subunit; NAD(P) transhydrogenase subunit beta complement(2260804..2261715) Burkholderia phytofirmans PsJN 6279352 YP_001889734.1 CDS Bphyt_6031 NC_010676.1 2261778 2262596 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_B2266 putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; fumarylacetoacetate (FAA) hydrolase complement(2261778..2262596) Burkholderia phytofirmans PsJN 6279713 YP_001889735.1 CDS Bphyt_6032 NC_010676.1 2262625 2263872 R catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; formyl-coenzyme A transferase complement(2262625..2263872) Burkholderia phytofirmans PsJN 6277354 YP_001889736.1 CDS Bphyt_6033 NC_010676.1 2264260 2264979 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B2268 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2264260..2264979) Burkholderia phytofirmans PsJN 6279478 YP_001889737.1 CDS Bphyt_6034 NC_010676.1 2264957 2265175 R KEGG: reh:H16_B0579 hypothetical protein; hypothetical protein complement(2264957..2265175) Burkholderia phytofirmans PsJN 6277774 YP_001889738.1 CDS Bphyt_6035 NC_010676.1 2265538 2266857 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2269 shikimate transporter; shikimate transporter 2265538..2266857 Burkholderia phytofirmans PsJN 6280465 YP_001889739.1 CDS Bphyt_6036 NC_010676.1 2267213 2268616 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2270 putative major facilitator superfamily (MFS)oxalate/formate antiporter; major facilitator superfamily protein 2267213..2268616 Burkholderia phytofirmans PsJN 6277297 YP_001889740.1 CDS Bphyt_6037 NC_010676.1 2268627 2268752 D KEGG: bmu:Bmul_2007 hypothetical protein; hypothetical protein 2268627..2268752 Burkholderia phytofirmans PsJN 6279055 YP_001889741.1 CDS Bphyt_6038 NC_010676.1 2268863 2271754 R PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bxe:Bxe_B2271 haemagluttinin like protein; YadA domain-containing protein complement(2268863..2271754) Burkholderia phytofirmans PsJN 6280345 YP_001889742.1 CDS Bphyt_6039 NC_010676.1 2272187 2273407 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2272 signal transduction histidine kinase; histidine kinase complement(2272187..2273407) Burkholderia phytofirmans PsJN 6279242 YP_001889743.1 CDS Bphyt_6040 NC_010676.1 2273689 2274114 R KEGG: bxe:Bxe_B2273 hypothetical protein; hypothetical protein complement(2273689..2274114) Burkholderia phytofirmans PsJN 6280103 YP_001889744.1 CDS Bphyt_6041 NC_010676.1 2274595 2275506 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B2274 trascriptional regulator, AraC family; AraC family transcriptional regulator complement(2274595..2275506) Burkholderia phytofirmans PsJN 6279130 YP_001889745.1 CDS Bphyt_6042 NC_010676.1 2275689 2276690 D PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bxe:Bxe_B2275 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2275689..2276690 Burkholderia phytofirmans PsJN 6278423 YP_001889746.1 CDS Bphyt_6043 NC_010676.1 2276822 2278237 R PFAM: Amidase; KEGG: rpa:RPA1734 putative amidotransferase, subunit A; amidase complement(2276822..2278237) Burkholderia phytofirmans PsJN 6277832 YP_001889747.1 CDS Bphyt_6044 NC_010676.1 2278295 2279056 R PFAM: ABC-2 type transporter; KEGG: bxe:Bxe_B2276 ABC efflux pump, inner membrane subunit; ABC transporter complement(2278295..2279056) Burkholderia phytofirmans PsJN 6277850 YP_001889748.1 CDS Bphyt_6045 NC_010676.1 2279053 2279979 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2277 ABC efflux pump, ATPase subunit; ABC transporter-like protein complement(2279053..2279979) Burkholderia phytofirmans PsJN 6277492 YP_001889749.1 CDS Bphyt_6046 NC_010676.1 2280370 2280792 D KEGG: bxe:Bxe_B2278 hypothetical protein; hypothetical protein 2280370..2280792 Burkholderia phytofirmans PsJN 6279248 YP_001889750.1 CDS Bphyt_6047 NC_010676.1 2280934 2282604 R PFAM: Tannase and feruloyl esterase; KEGG: bxe:Bxe_B2279 feruloyl esterase; feruloyl esterase complement(2280934..2282604) Burkholderia phytofirmans PsJN 6277346 YP_001889751.1 CDS Bphyt_6048 NC_010676.1 2282601 2283734 R KEGG: bxe:Bxe_B2280 hypothetical protein; hypothetical protein complement(2282601..2283734) Burkholderia phytofirmans PsJN 6277449 YP_001889752.1 CDS Bphyt_6049 NC_010676.1 2284212 2285483 D PFAM: acyltransferase 3; KEGG: bxe:Bxe_B2282 putative acyltransferase; acyltransferase 3 2284212..2285483 Burkholderia phytofirmans PsJN 6277422 YP_001889753.1 CDS Bphyt_6050 NC_010676.1 2285690 2286484 D PFAM: protein of unknown function DUF81; KEGG: bxe:Bxe_B2283 hypothetical protein; hypothetical protein 2285690..2286484 Burkholderia phytofirmans PsJN 6277376 YP_001889754.1 CDS Bphyt_6051 NC_010676.1 2286574 2286834 D KEGG: dre:100000182 hypothetical protein LOC100000182; hypothetical protein 2286574..2286834 Burkholderia phytofirmans PsJN 6279246 YP_001889755.1 CDS Bphyt_6052 NC_010676.1 2286915 2288819 R PFAM: peptidase M41; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2284 putative cell division protein; AAA ATPase complement(2286915..2288819) Burkholderia phytofirmans PsJN 6280354 YP_001889756.1 CDS Bphyt_6053 NC_010676.1 2289351 2290376 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: bmu:Bmul_3191 2-nitropropane dioxygenase NPD; 2-nitropropane dioxygenase 2289351..2290376 Burkholderia phytofirmans PsJN 6279100 YP_001889757.1 CDS Bphyt_6054 NC_010676.1 2290572 2291843 R PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mrd:Mrad2831_4221 arsenical pump membrane protein; arsenical pump membrane protein complement(2290572..2291843) Burkholderia phytofirmans PsJN 6277571 YP_001889758.1 CDS Bphyt_6055 NC_010676.1 2291853 2293163 R PFAM: major facilitator superfamily MFS_1; KEGG: rpb:RPB_4332 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2291853..2293163) Burkholderia phytofirmans PsJN 6280118 YP_001889759.1 CDS Bphyt_6056 NC_010676.1 2293160 2294260 R PFAM: metallophosphoesterase; KEGG: mrd:Mrad2831_4222 metallophosphoesterase; metallophosphoesterase complement(2293160..2294260) Burkholderia phytofirmans PsJN 6279162 YP_001889760.1 CDS Bphyt_6057 NC_010676.1 2294377 2294943 R KEGG: bch:Bcen2424_6732 hypothetical protein; hypothetical protein complement(2294377..2294943) Burkholderia phytofirmans PsJN 6277596 YP_001889761.1 CDS Bphyt_6058 NC_010676.1 2294971 2295777 R KEGG: bcm:Bcenmc03_6321 putative secreted protein; hypothetical protein complement(2294971..2295777) Burkholderia phytofirmans PsJN 6279232 YP_001889762.1 CDS Bphyt_6059 NC_010676.1 2295917 2297293 R PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bcm:Bcenmc03_6322 two component, sigma54 specific, transcriptional regulator, Fis family; Fis family two component sigma54 specific transcriptional regulator complement(2295917..2297293) Burkholderia phytofirmans PsJN 6278438 YP_001889763.1 CDS Bphyt_6060 NC_010676.1 2297275 2298843 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bch:Bcen2424_6735 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2297275..2298843) Burkholderia phytofirmans PsJN 6279053 YP_001889764.1 CDS Bphyt_6061 NC_010676.1 2299225 2299428 D KEGG: bxe:Bxe_B2061 hypothetical protein; hypothetical protein 2299225..2299428 Burkholderia phytofirmans PsJN 6279644 YP_001889765.1 CDS Bphyt_6062 NC_010676.1 2299595 2300287 D PFAM: phosphoesterase PA-phosphatase related; KEGG: bmu:Bmul_3315 phosphoesterase PA-phosphatase related; PA-phosphatase-like phosphoesterase 2299595..2300287 Burkholderia phytofirmans PsJN 6278544 YP_001889766.1 CDS Bphyt_6063 NC_010676.1 2300471 2301319 D PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: pna:Pnap_2706 shikimate dehydrogenase; shikimate dehydrogenase 2300471..2301319 Burkholderia phytofirmans PsJN 6277651 YP_001889767.1 CDS Bphyt_6064 NC_010676.1 2301437 2302060 D PFAM: ABC transporter related; KEGG: bur:Bcep18194_C7226 ABC multidrug efflux pump, ATPase subunit; ABC transporter-like protein 2301437..2302060 Burkholderia phytofirmans PsJN 6279558 YP_001889768.1 CDS Bphyt_6065 NC_010676.1 2302101 2303108 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B2290 putative alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(2302101..2303108) Burkholderia phytofirmans PsJN 6278827 YP_001889769.1 CDS Bphyt_6066 NC_010676.1 2303313 2303627 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bxe:Bxe_B2291 putative antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(2303313..2303627) Burkholderia phytofirmans PsJN 6280362 YP_001889770.1 CDS Bphyt_6067 NC_010676.1 2303787 2304746 R KEGG: bxe:Bxe_B2292 hypothetical protein; hypothetical protein complement(2303787..2304746) Burkholderia phytofirmans PsJN 6279076 YP_001889771.1 CDS Bphyt_6068 NC_010676.1 2304871 2306454 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_A4040 TPR domain protein; hypothetical protein complement(2304871..2306454) Burkholderia phytofirmans PsJN 6279567 YP_001889772.1 CDS Bphyt_6069 NC_010676.1 2306590 2306925 R KEGG: bpd:BURPS668_A0715 hypothetical protein; hypothetical protein complement(2306590..2306925) Burkholderia phytofirmans PsJN 6277380 YP_001889773.1 CDS Bphyt_6070 NC_010676.1 2306980 2308275 R PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bxe:Bxe_B2294 multicopper oxidase; multicopper oxidase type 3 complement(2306980..2308275) Burkholderia phytofirmans PsJN 6278996 YP_001889774.1 CDS Bphyt_6071 NC_010676.1 2308277 2309737 R PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B2295 putative outer membrane efflux protein involved in copper resistance; outer membrane efflux protein complement(2308277..2309737) Burkholderia phytofirmans PsJN 6278579 YP_001889775.1 CDS Bphyt_6072 NC_010676.1 2309734 2310039 R KEGG: bxe:Bxe_B2296 hypothetical protein; hypothetical protein complement(2309734..2310039) Burkholderia phytofirmans PsJN 6279808 YP_001889776.1 CDS Bphyt_6073 NC_010676.1 2310137 2310577 R KEGG: bxe:Bxe_B2297 hypothetical protein; hypothetical protein complement(2310137..2310577) Burkholderia phytofirmans PsJN 6277987 YP_001889777.1 CDS Bphyt_6074 NC_010676.1 2310729 2310926 D PFAM: Heavy metal transport/detoxification protein; KEGG: bxe:Bxe_B2298 heavy metal binding protein; heavy metal transport/detoxification protein 2310729..2310926 Burkholderia phytofirmans PsJN 6277591 YP_001889778.1 CDS Bphyt_6075 NC_010676.1 2310956 2311369 D PFAM: protein of unknown function DUF305; KEGG: bxe:Bxe_B2299 hypothetical protein; hypothetical protein 2310956..2311369 Burkholderia phytofirmans PsJN 6279231 YP_001889779.1 CDS Bphyt_6076 NC_010676.1 2311401 2312450 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_B0937 transcriptional regulator, AraC-family; AraC family transcriptional regulator complement(2311401..2312450) Burkholderia phytofirmans PsJN 6277509 YP_001889780.1 CDS Bphyt_6077 NC_010676.1 2312681 2313514 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rfr:Rfer_2229 methyltransferase type 11; type 11 methyltransferase 2312681..2313514 Burkholderia phytofirmans PsJN 6277978 YP_001889781.1 CDS Bphyt_6078 NC_010676.1 2313511 2313687 D hypothetical protein 2313511..2313687 Burkholderia phytofirmans PsJN 6279821 YP_001889782.1 CDS Bphyt_6079 NC_010676.1 2313771 2314958 R TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: bxe:Bxe_B2300 hypothetical protein; AcnD-accessory protein PrpF complement(2313771..2314958) Burkholderia phytofirmans PsJN 6278198 YP_001889783.1 CDS Bphyt_6080 NC_010676.1 2315069 2317666 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(2315069..2317666) Burkholderia phytofirmans PsJN 6278168 YP_001889784.1 CDS Bphyt_6081 NC_010676.1 2317995 2319164 R catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase complement(2317995..2319164) Burkholderia phytofirmans PsJN 6277637 YP_001889785.1 CDS Bphyt_6082 NC_010676.1 2319383 2321374 D KEGG: bxe:Bxe_B2303 sigma54 specific transcriptional regulator with PAS ssensor, fis family; TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: PAS domain containing protein; AAA ATPase; Fis family proprionate catabolism activator 2319383..2321374 Burkholderia phytofirmans PsJN 6277946 YP_001889786.1 CDS Bphyt_6083 NC_010676.1 2321331 2321759 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1502 putative transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator complement(2321331..2321759) Burkholderia phytofirmans PsJN 6279696 YP_001889787.1 CDS Bphyt_6084 NC_010676.1 2321756 2322925 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1501 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2321756..2322925) Burkholderia phytofirmans PsJN 6279875 YP_001889788.1 CDS Bphyt_6085 NC_010676.1 2322922 2324328 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B1500 pyridine nucleotide-disulphide oxidoreductase; BFD (2Fe-2S)-binding domain-containing protein complement(2322922..2324328) Burkholderia phytofirmans PsJN 6280189 YP_001889789.1 CDS Bphyt_6086 NC_010676.1 2324313 2324627 R KEGG: bxe:Bxe_B1499 putative NAD(FAD)-dependent dehydrogenase; NAD(FAD)-dependent dehydrogenase complement(2324313..2324627) Burkholderia phytofirmans PsJN 6279314 YP_001889790.1 CDS Bphyt_6087 NC_010676.1 2324624 2326468 R KEGG: bxe:Bxe_B1498 ABC peptide transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(2324624..2326468) Burkholderia phytofirmans PsJN 6277349 YP_001889791.1 CDS Bphyt_6088 NC_010676.1 2326468 2327418 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1497 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2326468..2327418) Burkholderia phytofirmans PsJN 6279819 YP_001889792.1 CDS Bphyt_6089 NC_010676.1 2327415 2328368 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1496 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2327415..2328368) Burkholderia phytofirmans PsJN 6277373 YP_001889793.1 CDS Bphyt_6090 NC_010676.1 2328450 2330066 R PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_B1495 ABC peptide transporter, periplasmic ligand binding protein; family 5 extracellular solute-binding protein complement(2328450..2330066) Burkholderia phytofirmans PsJN 6279019 YP_001889794.1 CDS Bphyt_6091 NC_010676.1 2330146 2331420 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1494 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2330146..2331420) Burkholderia phytofirmans PsJN 6277452 YP_001889795.1 CDS Bphyt_6092 NC_010676.1 2331464 2332132 R TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B1493 HAD-superfamily hydrolase, subfamily IA, variant2; type II haloacid dehalogenase complement(2331464..2332132) Burkholderia phytofirmans PsJN 6279583 YP_001889796.1 CDS Bphyt_6093 NC_010676.1 2332646 2333530 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B1491 hypothetical protein; N-acetyltransferase GCN5 2332646..2333530 Burkholderia phytofirmans PsJN 6277661 YP_001889797.1 CDS Bphyt_6094 NC_010676.1 2333537 2334463 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_B1490 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 2333537..2334463 Burkholderia phytofirmans PsJN 6279247 YP_001889798.1 CDS Bphyt_6095 NC_010676.1 2334647 2336044 D PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B1489 hypothetical protein; hypothetical protein 2334647..2336044 Burkholderia phytofirmans PsJN 6279440 YP_001889799.1 CDS Bphyt_6096 NC_010676.1 2336100 2336597 D PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_B1488 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2336100..2336597 Burkholderia phytofirmans PsJN 6279640 YP_001889800.1 CDS Bphyt_6097 NC_010676.1 2336658 2337614 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1487 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2336658..2337614) Burkholderia phytofirmans PsJN 6280304 YP_001889801.1 CDS Bphyt_6098 NC_010676.1 2337760 2338842 D KEGG: bxe:Bxe_B1486 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 2337760..2338842 Burkholderia phytofirmans PsJN 6279620 YP_001889802.1 CDS Bphyt_6100 NC_010676.1 2339081 2339425 D PFAM: protein of unknown function DUF861 cupin_3; KEGG: bxe:Bxe_B1483 hypothetical protein; hypothetical protein 2339081..2339425 Burkholderia phytofirmans PsJN 6279883 YP_001889803.1 CDS Bphyt_6101 NC_010676.1 2339775 2340995 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1795 outer membrane porin, OmpC family; porin 2339775..2340995 Burkholderia phytofirmans PsJN 6279506 YP_001889804.1 CDS Bphyt_6102 NC_010676.1 2341071 2342429 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2304 major facilitator superfamily (MFS) aromatic acid transporter; major facilitator superfamily protein 2341071..2342429 Burkholderia phytofirmans PsJN 6277545 YP_001889805.1 CDS Bphyt_6104 NC_010676.1 2343022 2343348 D KEGG: bxe:Bxe_B2305 hypothetical protein; hypothetical protein 2343022..2343348 Burkholderia phytofirmans PsJN 6279245 YP_001889806.1 CDS Bphyt_6106 NC_010676.1 2344269 2347127 D TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bmu:Bmul_3914 type VI secretion system Vgr family protein; ImpA family type VI secretion-associated protein 2344269..2347127 Burkholderia phytofirmans PsJN 6279624 YP_001889807.1 CDS Bphyt_6107 NC_010676.1 2347120 2348472 D KEGG: xom:XOO_3738 hypothetical protein; hypothetical protein 2347120..2348472 Burkholderia phytofirmans PsJN 6280167 YP_001889808.1 CDS Bphyt_6108 NC_010676.1 2348459 2349145 D hypothetical protein 2348459..2349145 Burkholderia phytofirmans PsJN 6277417 YP_001889809.1 CDS Bphyt_6109 NC_010676.1 2349850 2351322 D TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: rso:RSp1611 probable succinate-semialdehyde dehydrogenase oxidoreductase protein; succinate-semialdehyde dehydrogenase 2349850..2351322 Burkholderia phytofirmans PsJN 6277962 YP_001889810.1 CDS Bphyt_6110 NC_010676.1 2351734 2353092 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2307 major facilitator superfamily (MFS)metabolite/H+ symporter; major facilitator superfamily protein 2351734..2353092 Burkholderia phytofirmans PsJN 6277763 YP_001889811.1 CDS Bphyt_6111 NC_010676.1 2353149 2354366 D PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B2308 hypothetical protein; acyl-CoA dehydrogenase type 2 domain 2353149..2354366 Burkholderia phytofirmans PsJN 6278987 YP_001889812.1 CDS Bphyt_6112 NC_010676.1 2354390 2354950 D TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_B2309 4-hydroxyphenylacetate 3-monooxygenase coupling protein; 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit 2354390..2354950 Burkholderia phytofirmans PsJN 6279732 YP_001889813.1 CDS Bphyt_6113 NC_010676.1 2354953 2355663 D PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bxe:Bxe_B2310 hypothetical protein; ethyl tert-butyl ether degradation EthD 2354953..2355663 Burkholderia phytofirmans PsJN 6277809 YP_001889814.1 CDS Bphyt_6114 NC_010676.1 2355693 2356643 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2311 transcriptional regulator, LysR family; LysR family transcriptional regulator 2355693..2356643 Burkholderia phytofirmans PsJN 6279637 YP_001889815.1 CDS Bphyt_6115 NC_010676.1 2356640 2357539 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2312 transcriptional regulator, LysR family; LysR family transcriptional regulator 2356640..2357539 Burkholderia phytofirmans PsJN 6279255 YP_001889816.1 CDS Bphyt_6116 NC_010676.1 2357667 2358989 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2313 major facilitator superfamily (MFS) tartrate/H+symporter; major facilitator superfamily protein 2357667..2358989 Burkholderia phytofirmans PsJN 6278977 YP_001889817.1 CDS Bphyt_6117 NC_010676.1 2359089 2360138 D PFAM: amidohydrolase 2; KEGG: bxe:Bxe_B2314 putative 4-oxalomesaconate hydratase; amidohydrolase 2 2359089..2360138 Burkholderia phytofirmans PsJN 6279476 YP_001889818.1 CDS Bphyt_6118 NC_010676.1 2360135 2360803 D PFAM: Dimethylmenaquinone methyltransferase; KEGG: bxe:Bxe_B2315 hypothetical protein; hypothetical protein 2360135..2360803 Burkholderia phytofirmans PsJN 6277474 YP_001889819.1 CDS Bphyt_6119 NC_010676.1 2360815 2361213 D KEGG: bxe:Bxe_B2316 hypothetical protein; hypothetical protein 2360815..2361213 Burkholderia phytofirmans PsJN 6279715 YP_001889820.1 CDS Bphyt_6120 NC_010676.1 2361239 2362093 R PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bxe:Bxe_B2317 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2361239..2362093) Burkholderia phytofirmans PsJN 6279889 YP_001889821.1 CDS Bphyt_6121 NC_010676.1 2362114 2362827 R PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: bxe:Bxe_B2318 putative alanyl-tRNA synthetase; threonyl/alanyl tRNA synthetase SAD complement(2362114..2362827) Burkholderia phytofirmans PsJN 6279968 YP_001889822.1 CDS Bphyt_6122 NC_010676.1 2362891 2363970 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2375 transcriptional regulator, LysR family; LysR family transcriptional regulator 2362891..2363970 Burkholderia phytofirmans PsJN 6277485 YP_001889823.1 CDS Bphyt_6123 NC_010676.1 2363981 2367013 R PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_4; KEGG: bxe:Bxe_B2376 transcriptional regulator, winged helix family; winged helix family transcriptional regulator complement(2363981..2367013) Burkholderia phytofirmans PsJN 6278178 YP_001889824.1 CDS Bphyt_6124 NC_010676.1 2367196 2367711 R KEGG: bxe:Bxe_B2377 hypothetical protein; hypothetical protein complement(2367196..2367711) Burkholderia phytofirmans PsJN 6278322 YP_001889825.1 CDS Bphyt_6125 NC_010676.1 2367760 2368758 R PFAM: beta-lactamase domain protein; KEGG: bxe:Bxe_B2378 putative metallo-beta-lactamase; beta-lactamase domain-containing protein complement(2367760..2368758) Burkholderia phytofirmans PsJN 6279275 YP_001889826.1 CDS Bphyt_6126 NC_010676.1 2368836 2370563 R PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2382 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2368836..2370563) Burkholderia phytofirmans PsJN 6279622 YP_001889827.1 CDS Bphyt_6127 NC_010676.1 2370616 2372145 R KEGG: bxe:Bxe_B2383 hypothetical protein; hypothetical protein complement(2370616..2372145) Burkholderia phytofirmans PsJN 6278632 YP_001889828.1 CDS Bphyt_6128 NC_010676.1 2372156 2373106 R KEGG: bxe:Bxe_B2384 hypothetical protein; hypothetical protein complement(2372156..2373106) Burkholderia phytofirmans PsJN 6277332 YP_001889829.1 CDS Bphyt_6129 NC_010676.1 2373155 2373406 R PFAM: protein of unknown function DUF1427; KEGG: bxe:Bxe_B2385 hypothetical protein; hypothetical protein complement(2373155..2373406) Burkholderia phytofirmans PsJN 6277628 YP_001889830.1 CDS Bphyt_6130 NC_010676.1 2373448 2374089 R KEGG: bxe:Bxe_B2386 hypothetical protein; hypothetical protein complement(2373448..2374089) Burkholderia phytofirmans PsJN 6279008 YP_001889831.1 CDS Bphyt_6131 NC_010676.1 2374231 2375700 R PFAM: cyclic nucleotide-binding; MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_B2387 cyclic nucleotide-regulated small mechanosensitive ion channel; cyclic nucleotide-regulated small mechanosensitive ion channel complement(2374231..2375700) Burkholderia phytofirmans PsJN 6279444 YP_001889832.1 CDS Bphyt_6132 NC_010676.1 2375740 2377620 R PFAM: Amidohydrolase 3; KEGG: bxe:Bxe_B2388 hypothetical protein; amidohydrolase 3 complement(2375740..2377620) Burkholderia phytofirmans PsJN 6279207 YP_001889833.1 CDS Bphyt_6133 NC_010676.1 2377847 2378482 R PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_B2389 putative isochorismatase hydrolase; isochorismatase hydrolase complement(2377847..2378482) Burkholderia phytofirmans PsJN 6277481 YP_001889834.1 CDS Bphyt_6134 NC_010676.1 2379035 2379856 D PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_5312 alpha/beta hydrolase fold; alpha/beta fold family hydrolase 2379035..2379856 Burkholderia phytofirmans PsJN 6279502 YP_001889835.1 CDS Bphyt_6135 NC_010676.1 2380402 2381319 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B2379 transcriptional regulator, AraC family; AraC family transcriptional regulator 2380402..2381319 Burkholderia phytofirmans PsJN 6277488 YP_001889836.1 CDS Bphyt_6136 NC_010676.1 2381492 2384536 D PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_4; KEGG: bxe:Bxe_B2380 transcriptional regulator, winged helix family; winged helix family transcriptional regulator 2381492..2384536 Burkholderia phytofirmans PsJN 6279278 YP_001889837.1 CDS Bphyt_6137 NC_010676.1 2384579 2385469 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pha:PSHAa1064 DNA-binding transcriptional activator GcvA; LysR family transcriptional regulator complement(2384579..2385469) Burkholderia phytofirmans PsJN 6279230 YP_001889838.1 CDS Bphyt_6138 NC_010676.1 2385601 2386446 D PFAM: Transketolase domain protein; KEGG: reu:Reut_B4777 transketolase, N-terminal; transketolase domain-containing protein 2385601..2386446 Burkholderia phytofirmans PsJN 6277387 YP_001889839.1 CDS Bphyt_6139 NC_010676.1 2386443 2387441 D PFAM: Transketolase central region; Transketolase domain protein; KEGG: bmu:Bmul_4991 transketolase central region; transketolase central region 2386443..2387441 Burkholderia phytofirmans PsJN 6279825 YP_001889840.1 CDS Bphyt_6140 NC_010676.1 2387530 2388294 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_1541 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2387530..2388294 Burkholderia phytofirmans PsJN 6278974 YP_001889841.1 CDS Bphyt_6141 NC_010676.1 2388468 2389511 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bja:blr2170 probable ABC transporter substrate-binding protein; TRAP dicarboxylate transporter subunit DctP 2388468..2389511 Burkholderia phytofirmans PsJN 6279041 YP_001889842.1 CDS Bphyt_6142 NC_010676.1 2389516 2391375 D PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpd:RPD_2721 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 2389516..2391375 Burkholderia phytofirmans PsJN 6280344 YP_001889843.1 CDS Bphyt_6143 NC_010676.1 2391527 2393575 D TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: xau:Xaut_1535 transketolase; transketolase 2391527..2393575 Burkholderia phytofirmans PsJN 6279461 YP_001889844.1 CDS Bphyt_6144 NC_010676.1 2393594 2394559 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: reh:H16_B0611 glycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 2393594..2394559 Burkholderia phytofirmans PsJN 6279317 YP_001889845.1 CDS Bphyt_6145 NC_010676.1 2394618 2395394 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2319 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2394618..2395394) Burkholderia phytofirmans PsJN 6277556 YP_001889846.1 CDS Bphyt_6146 NC_010676.1 2395592 2396179 D PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B2320 transcriptional regulator, TetR family; TetR family transcriptional regulator 2395592..2396179 Burkholderia phytofirmans PsJN 6279357 YP_001889847.1 CDS Bphyt_6147 NC_010676.1 2396266 2397750 R KEGG: mca:MCA0365 hypothetical protein; hypothetical protein complement(2396266..2397750) Burkholderia phytofirmans PsJN 6277818 YP_001889848.1 CDS Bphyt_6148 NC_010676.1 2397996 2398967 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1512 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2397996..2398967) Burkholderia phytofirmans PsJN 6278822 YP_001889849.1 CDS Bphyt_6149 NC_010676.1 2399069 2400151 D KEGG: bxe:Bxe_B1511 ABC spermidine/putrescine transporter, ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 2399069..2400151 Burkholderia phytofirmans PsJN 6277537 YP_001889850.1 CDS Bphyt_6150 NC_010676.1 2400217 2400930 D TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B1510 HAD-superfamily hydrolase, subfamily IA, variant2; type II haloacid dehalogenase 2400217..2400930 Burkholderia phytofirmans PsJN 6277335 YP_001889851.1 CDS Bphyt_6151 NC_010676.1 2400935 2402272 D PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B1509 putative FAD dependent oxidoreductase; FAD dependent oxidoreductase 2400935..2402272 Burkholderia phytofirmans PsJN 6277351 YP_001889852.1 CDS Bphyt_6152 NC_010676.1 2402272 2403177 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1508 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2402272..2403177 Burkholderia phytofirmans PsJN 6278203 YP_001889853.1 CDS Bphyt_6153 NC_010676.1 2403174 2403968 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1507 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2403174..2403968 Burkholderia phytofirmans PsJN 6278667 YP_001889854.1 CDS Bphyt_6154 NC_010676.1 2403993 2405420 D PFAM: Aldehyde Dehydrogenase_; KEGG: azc:AZC_1789 aldehyde dehydrogenase; aldehyde dehydrogenase 2403993..2405420 Burkholderia phytofirmans PsJN 6279293 YP_001889855.1 CDS Bphyt_6155 NC_010676.1 2405520 2407199 R PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: bxe:Bxe_B1504 putative choline dehydrogenase; glucose-methanol-choline oxidoreductase complement(2405520..2407199) Burkholderia phytofirmans PsJN 6279236 YP_001889856.1 CDS Bphyt_6156 NC_010676.1 2407320 2408426 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B1503 ABC spermidine/putrescine transporter, periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(2407320..2408426) Burkholderia phytofirmans PsJN 6279144 YP_001889857.1 CDS Bphyt_6157 NC_010676.1 2408601 2409596 R KEGG: bcm:Bcenmc03_3498 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein; ABC nitrate/sulfonate/bicarbonate family transporter periplasmic ligand binding protein complement(2408601..2409596) Burkholderia phytofirmans PsJN 6279288 YP_001889858.1 CDS Bphyt_6158 NC_010676.1 2409869 2410882 D TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_C0159 ABC aliphatic sulphonates transporter, periplasmic ligand binding protein; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein 2409869..2410882 Burkholderia phytofirmans PsJN 6277796 YP_001889859.1 CDS Bphyt_6159 NC_010676.1 2410996 2411646 D KEGG: bxe:Bxe_B2322 hypothetical protein; hypothetical protein 2410996..2411646 Burkholderia phytofirmans PsJN 6279488 YP_001889860.1 CDS Bphyt_6161 NC_010676.1 2412371 2412661 D KEGG: bxe:Bxe_B2331 hypothetical protein; hypothetical protein 2412371..2412661 Burkholderia phytofirmans PsJN 6277361 YP_001889861.1 CDS Bphyt_6162 NC_010676.1 2413064 2413747 D PFAM: Glutathione S-transferase domain; KEGG: pol:Bpro_0387 glutathione S-transferase-like; glutathione S-transferase domain 2413064..2413747 Burkholderia phytofirmans PsJN 6277379 YP_001889862.1 CDS Bphyt_6163 NC_010676.1 2413834 2415429 R Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator complement(2413834..2415429) Burkholderia phytofirmans PsJN 6277605 YP_001889863.1 CDS Bphyt_6164 NC_010676.1 2415542 2416723 D flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 2415542..2416723 Burkholderia phytofirmans PsJN 6277427 YP_001889864.1 CDS Bphyt_6165 NC_010676.1 2416803 2417090 R KEGG: bxe:Bxe_B2334 hypothetical protein; hypothetical protein complement(2416803..2417090) Burkholderia phytofirmans PsJN 6278050 YP_001889865.1 CDS Bphyt_6166 NC_010676.1 2417163 2417309 R KEGG: bxe:Bxe_B2335 hypothetical protein; hypothetical protein complement(2417163..2417309) Burkholderia phytofirmans PsJN 6279625 YP_001889866.1 CDS Bphyt_6167 NC_010676.1 2417578 2418102 R TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bxe:Bxe_B2336 phasin; phasin family protein complement(2417578..2418102) Burkholderia phytofirmans PsJN 6277610 YP_001889867.1 CDS Bphyt_6168 NC_010676.1 2418556 2419074 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: bja:blr4383 hypothetical protein; cupin complement(2418556..2419074) Burkholderia phytofirmans PsJN 6277616 YP_001889868.1 CDS Bphyt_6169 NC_010676.1 2419071 2419808 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: psb:Psyr_5111 dTDP-glucose 4,6-dehydratase; NAD-dependent epimerase/dehydratase complement(2419071..2419808) Burkholderia phytofirmans PsJN 6279250 YP_001889869.1 CDS Bphyt_6170 NC_010676.1 2419923 2421494 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rxy:Rxyl_0136 transcriptional regulator, GntR family; GntR family transcriptional regulator 2419923..2421494 Burkholderia phytofirmans PsJN 6277652 YP_001889870.1 CDS Bphyt_6172 NC_010676.1 2421651 2422112 D PFAM: protein of unknown function DUF1452; KEGG: pol:Bpro_2306 protein of unknown function DUF1452; hypothetical protein 2421651..2422112 Burkholderia phytofirmans PsJN 6277734 YP_001889871.1 CDS Bphyt_6173 NC_010676.1 2422182 2423213 R PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_II2254 epoxide hydrolase; alpha/beta fold family hydrolase complement(2422182..2423213) Burkholderia phytofirmans PsJN 6278401 YP_001889872.1 CDS Bphyt_6174 NC_010676.1 2423233 2424750 R PFAM: MlrC domain protein; Microcystin LR degradation protein MlrC-like; KEGG: bte:BTH_II2255 MlrC C-terminus family; MlrC domain-containing protein complement(2423233..2424750) Burkholderia phytofirmans PsJN 6277408 YP_001889873.1 CDS Bphyt_6175 NC_010676.1 2424856 2426145 R PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B5122 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2424856..2426145) Burkholderia phytofirmans PsJN 6277301 YP_001889874.1 CDS Bphyt_6176 NC_010676.1 2426288 2427250 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II2256 transcriptional regulator, LysR family, putative; LysR family transcriptional regulator 2426288..2427250 Burkholderia phytofirmans PsJN 6277315 YP_001889875.1 CDS Bphyt_6177 NC_010676.1 2427414 2428445 R PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_II2254 epoxide hydrolase; alpha/beta fold family hydrolase complement(2427414..2428445) Burkholderia phytofirmans PsJN 6277650 YP_001889876.1 CDS Bphyt_6178 NC_010676.1 2428573 2428887 R KEGG: bxe:Bxe_B2209 hypothetical protein; hypothetical protein complement(2428573..2428887) Burkholderia phytofirmans PsJN 6279464 YP_001889877.1 CDS Bphyt_6179 NC_010676.1 2429138 2429941 R PFAM: regulatory protein LuxR; KEGG: pfl:PFL_4899 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(2429138..2429941) Burkholderia phytofirmans PsJN 6277402 YP_001889878.1 CDS Bphyt_6180 NC_010676.1 2430098 2431225 D PFAM: peptidase S58 DmpA; KEGG: bmu:Bmul_4288 peptidase S58 DmpA; peptidase S58 DmpA 2430098..2431225 Burkholderia phytofirmans PsJN 6278543 YP_001889879.1 CDS Bphyt_6181 NC_010676.1 2431274 2432383 D PFAM: extracellular solute-binding protein family 1; KEGG: bmu:Bmul_2990 extracellular solute-binding protein family 1; family 1 extracellular solute-binding protein 2431274..2432383 Burkholderia phytofirmans PsJN 6277483 YP_001889880.1 CDS Bphyt_6182 NC_010676.1 2432390 2433142 D KEGG: bur:Bcep18194_C7441 hypothetical protein; hypothetical protein 2432390..2433142 Burkholderia phytofirmans PsJN 6279634 YP_001889881.1 CDS Bphyt_6183 NC_010676.1 2433320 2434798 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: afw:Anae109_1671 histidine kinase; histidine kinase complement(2433320..2434798) Burkholderia phytofirmans PsJN 6279831 YP_001889882.1 CDS Bphyt_6184 NC_010676.1 2435117 2435986 R TIGRFAM: methyltransferase; KEGG: bxe:Bxe_C0022 hypothetical protein; methyltransferase complement(2435117..2435986) Burkholderia phytofirmans PsJN 6279799 YP_001889883.1 CDS Bphyt_6185 NC_010676.1 2436101 2436265 D KEGG: rpd:RPD_4380 hypothetical protein; hypothetical protein 2436101..2436265 Burkholderia phytofirmans PsJN 6277658 YP_001889884.1 CDS Bphyt_6186 NC_010676.1 2436281 2436721 R PFAM: protein of unknown function DUF1486; KEGG: bxe:Bxe_A3831 hypothetical protein; hypothetical protein complement(2436281..2436721) Burkholderia phytofirmans PsJN 6279305 YP_001889885.1 CDS Bphyt_6187 NC_010676.1 2437076 2438182 D TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bxe:Bxe_A3833 Dyp-type peroxidase; dyp-type peroxidase family protein 2437076..2438182 Burkholderia phytofirmans PsJN 6277805 YP_001889886.1 CDS Bphyt_6188 NC_010676.1 2438240 2438977 D PFAM: Linocin_M18 bacteriocin protein; KEGG: bxe:Bxe_A3834 hypothetical protein; Linocin_M18 bacteriocin protein 2438240..2438977 Burkholderia phytofirmans PsJN 6279259 YP_001889887.1 CDS Bphyt_6189 NC_010676.1 2438996 2439985 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3835 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2438996..2439985) Burkholderia phytofirmans PsJN 6278665 YP_001889888.1 CDS Bphyt_6190 NC_010676.1 2440331 2441758 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_A3836 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator 2440331..2441758 Burkholderia phytofirmans PsJN 6280178 YP_001889889.1 CDS Bphyt_6191 NC_010676.1 2441800 2442807 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bxe:Bxe_A3839 cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(2441800..2442807) Burkholderia phytofirmans PsJN 6278552 YP_001889890.1 CDS Bphyt_6192 NC_010676.1 2442812 2444200 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bxe:Bxe_A3840 putative cytochrome oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I complement(2442812..2444200) Burkholderia phytofirmans PsJN 6279235 YP_001889891.1 CDS Bphyt_6193 NC_010676.1 2444414 2447206 R PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: reh:H16_B1382 ATP-dependent protease Clp, ATPase subunit; ATPase AAA-2 domain-containing protein complement(2444414..2447206) Burkholderia phytofirmans PsJN 6277388 YP_001889892.1 CDS Bphyt_6194 NC_010676.1 2447596 2447976 R KEGG: bxe:Bxe_A3842 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator complement(2447596..2447976) Burkholderia phytofirmans PsJN 6279168 YP_001889893.1 CDS Bphyt_6195 NC_010676.1 2448039 2448236 R KEGG: reh:H16_B1381 hypothetical protein; hypothetical protein complement(2448039..2448236) Burkholderia phytofirmans PsJN 6277602 YP_001889894.1 CDS Bphyt_6196 NC_010676.1 2448275 2448532 R KEGG: bch:Bcen2424_6429 hypothetical protein; hypothetical protein complement(2448275..2448532) Burkholderia phytofirmans PsJN 6277478 YP_001889895.1 CDS Bphyt_6197 NC_010676.1 2448779 2449096 D KEGG: bpd:BURPS668_A3179 hypothetical protein; hypothetical protein 2448779..2449096 Burkholderia phytofirmans PsJN 6279916 YP_001889896.1 CDS Bphyt_6198 NC_010676.1 2449176 2449529 R KEGG: mag:amb3780 protein required for attachment to host cells; hypothetical protein complement(2449176..2449529) Burkholderia phytofirmans PsJN 6278056 YP_001889897.1 CDS Bphyt_6199 NC_010676.1 2449648 2449872 R hypothetical protein complement(2449648..2449872) Burkholderia phytofirmans PsJN 6277523 YP_001889898.1 CDS Bphyt_6200 NC_010676.1 2449895 2451121 D PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_1386 putative transmembrane efflux protein; major facilitator superfamily protein 2449895..2451121 Burkholderia phytofirmans PsJN 6277303 YP_001889899.1 CDS Bphyt_6201 NC_010676.1 2451189 2452193 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_C6115 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 2451189..2452193 Burkholderia phytofirmans PsJN 6279868 YP_001889900.1 CDS Bphyt_6202 NC_010676.1 2452246 2453232 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reu:Reut_B4732 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase zinc-binding domain-containing protein complement(2452246..2453232) Burkholderia phytofirmans PsJN 6277973 YP_001889901.1 CDS Bphyt_6203 NC_010676.1 2453574 2453921 D KEGG: bxe:Bxe_B2756 hypothetical protein; hypothetical protein 2453574..2453921 Burkholderia phytofirmans PsJN 6277574 YP_001889902.1 CDS Bphyt_6204 NC_010676.1 2454070 2454762 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_A4089 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2454070..2454762) Burkholderia phytofirmans PsJN 6277429 YP_001889903.1 CDS Bphyt_6205 NC_010676.1 2455034 2456449 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4090 major facilitator superfamily (MFS) metabolite(sugar)/H+ symporter; major facilitator superfamily protein 2455034..2456449 Burkholderia phytofirmans PsJN 6278080 YP_001889904.1 CDS Bphyt_6206 NC_010676.1 2456446 2457801 D PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_A4091 hypothetical protein; MmgE/PrpD family protein 2456446..2457801 Burkholderia phytofirmans PsJN 6278709 YP_001889905.1 CDS Bphyt_6207 NC_010676.1 2457794 2458531 D KEGG: bxe:Bxe_A4092 hypothetical protein; hypothetical protein 2457794..2458531 Burkholderia phytofirmans PsJN 6277323 YP_001889906.1 CDS Bphyt_6208 NC_010676.1 2458632 2459177 D PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A4093 hypothetical protein; hypothetical protein 2458632..2459177 Burkholderia phytofirmans PsJN 6277934 YP_001889907.1 CDS Bphyt_6209 NC_010676.1 2459283 2460038 D KEGG: bxe:Bxe_A4094 hypothetical protein; gluconate 2-dehydrogenase 2459283..2460038 Burkholderia phytofirmans PsJN 6277321 YP_001889908.1 CDS Bphyt_6210 NC_010676.1 2460099 2461883 D PFAM: glucose-methanol-choline oxidoreductase; KEGG: bxe:Bxe_A4095 putative gluconate dehydrogenase; gluconate 2-dehydrogenase 2460099..2461883 Burkholderia phytofirmans PsJN 6277561 YP_001889909.1 CDS Bphyt_6211 NC_010676.1 2461893 2463239 D PFAM: cytochrome c class I; KEGG: bxe:Bxe_A4096 putative cytochrome c; gluconate 2-dehydrogenase 2461893..2463239 Burkholderia phytofirmans PsJN 6277646 YP_001889910.1 CDS Bphyt_6212 NC_010676.1 2463352 2464521 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A4097 outer membrane porin, OmpC family; porin complement(2463352..2464521) Burkholderia phytofirmans PsJN 6279058 YP_001889911.1 CDS Bphyt_6213 NC_010676.1 2464699 2465451 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A4098 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2464699..2465451) Burkholderia phytofirmans PsJN 6277665 YP_001889912.1 CDS Bphyt_6214 NC_010676.1 2465448 2466749 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4099 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(2465448..2466749) Burkholderia phytofirmans PsJN 6277565 YP_001889913.1 CDS Bphyt_6215 NC_010676.1 2466877 2468160 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4100 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(2466877..2468160) Burkholderia phytofirmans PsJN 6277666 YP_001889914.1 CDS Bphyt_6216 NC_010676.1 2468534 2469283 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_A4101 transcriptional regulator, GntR family; GntR family transcriptional regulator 2468534..2469283 Burkholderia phytofirmans PsJN 6278892 YP_001889915.1 CDS Bphyt_6217 NC_010676.1 2469367 2470752 D PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_A4102 hypothetical protein; MmgE/PrpD family protein 2469367..2470752 Burkholderia phytofirmans PsJN 6279261 YP_001889916.1 CDS Bphyt_6218 NC_010676.1 2470894 2471634 R PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_A4103 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2470894..2471634) Burkholderia phytofirmans PsJN 6279927 YP_001889917.1 CDS Bphyt_6219 NC_010676.1 2471969 2472400 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A4104 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2471969..2472400 Burkholderia phytofirmans PsJN 6279541 YP_001889918.1 CDS Bphyt_6220 NC_010676.1 2472546 2473859 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4105 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein 2472546..2473859 Burkholderia phytofirmans PsJN 6279632 YP_001889919.1 CDS Bphyt_6221 NC_010676.1 2473942 2474304 R PFAM: protein of unknown function DUF190; KEGG: neu:NE1703 DUF190; hypothetical protein complement(2473942..2474304) Burkholderia phytofirmans PsJN 6280529 YP_001889920.1 CDS Bphyt_6222 NC_010676.1 2474459 2475673 R PFAM: MscS Mechanosensitive ion channel; KEGG: pmy:Pmen_1305 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(2474459..2475673) Burkholderia phytofirmans PsJN 6280199 YP_001889921.1 CDS Bphyt_6223 NC_010676.1 2475901 2476389 R KEGG: reu:Reut_B5723 hypothetical protein; hypothetical protein complement(2475901..2476389) Burkholderia phytofirmans PsJN 6279519 YP_001889922.1 CDS Bphyt_6224 NC_010676.1 2476620 2477054 D PFAM: regulatory protein MarR; KEGG: rme:Rmet_5772 transcriptional regulator, MarR family; MarR family transcriptional regulator 2476620..2477054 Burkholderia phytofirmans PsJN 6278786 YP_001889923.1 CDS Bphyt_6225 NC_010676.1 2477576 2478664 D KEGG: acr:Acry_2602 ABC-type sugar transport system periplasmic component-like protein; sugar ABC transporter periplasmic protein-like protein 2477576..2478664 Burkholderia phytofirmans PsJN 6277704 YP_001889924.1 CDS Bphyt_6226 NC_010676.1 2478661 2479662 D PFAM: inner-membrane translocator; KEGG: gdi:GDI2631 putative ribose transport system permease protein RbsC; monosaccharide-transporting ATPase 2478661..2479662 Burkholderia phytofirmans PsJN 6279492 YP_001889925.1 CDS Bphyt_6227 NC_010676.1 2479662 2480432 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2632 putative ABC transporter, ATP-binding protein; ABC transporter-like protein 2479662..2480432 Burkholderia phytofirmans PsJN 6280281 YP_001889926.1 CDS Bphyt_6228 NC_010676.1 2480542 2481144 R PFAM: Chromate transporter; KEGG: bur:Bcep18194_A4041 chromate transporter; chromate transporter complement(2480542..2481144) Burkholderia phytofirmans PsJN 6278939 YP_001889927.1 CDS Bphyt_6229 NC_010676.1 2481113 2481757 R PFAM: Chromate transporter; KEGG: bmu:Bmul_2453 chromate transporter; chromate transporter complement(2481113..2481757) Burkholderia phytofirmans PsJN 6278529 YP_001889928.1 CDS Bphyt_6230 NC_010676.1 2482140 2483774 D PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: lpp:lpp1426 hypothetical protein; peptidase S13 D-Ala-D-Ala carboxypeptidase C 2482140..2483774 Burkholderia phytofirmans PsJN 6279662 YP_001889929.1 CDS Bphyt_6231 NC_010676.1 2483931 2484239 D KEGG: bxe:Bxe_B2629 hypothetical protein; hypothetical protein 2483931..2484239 Burkholderia phytofirmans PsJN 6277398 YP_001889930.1 CDS Bphyt_6232 NC_010676.1 2484268 2485140 D KEGG: bxe:Bxe_A2249 putative transposase A-like protein; transposase A-like protein 2484268..2485140 Burkholderia phytofirmans PsJN 6277489 YP_001889931.1 CDS Bphyt_6233 NC_010676.1 2485191 2485400 R KEGG: bvi:Bcep1808_7610 hypothetical protein; hypothetical protein complement(2485191..2485400) Burkholderia phytofirmans PsJN 6278165 YP_001889932.1 CDS Bphyt_6234 NC_010676.1 2485432 2485680 R KEGG: bch:Bcen2424_6850 hypothetical protein; hypothetical protein complement(2485432..2485680) Burkholderia phytofirmans PsJN 6277428 YP_001889933.1 CDS Bphyt_6235 NC_010676.1 2485818 2486450 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: tbd:Tbd_1290 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(2485818..2486450) Burkholderia phytofirmans PsJN 6277604 YP_001889934.1 CDS Bphyt_6236 NC_010676.1 2486428 2488089 R KEGG: pae:PA0600 probable two-component sensor; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(2486428..2488089) Burkholderia phytofirmans PsJN 6277548 YP_001889935.1 CDS Bphyt_6237 NC_010676.1 2488086 2490251 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bvi:Bcep1808_5667 multi-sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase complement(2488086..2490251) Burkholderia phytofirmans PsJN 6277935 YP_001889936.1 CDS Bphyt_6238 NC_010676.1 2490449 2490790 R KEGG: bxe:Bxe_B2629 hypothetical protein; hypothetical protein complement(2490449..2490790) Burkholderia phytofirmans PsJN 6277311 YP_001889937.1 CDS Bphyt_6239 NC_010676.1 2491046 2491927 D KEGG: pca:Pcar_2298 hypothetical protein; hypothetical protein 2491046..2491927 Burkholderia phytofirmans PsJN 6278319 YP_001889938.1 CDS Bphyt_6240 NC_010676.1 2492124 2492621 D hypothetical protein 2492124..2492621 Burkholderia phytofirmans PsJN 6278076 YP_001889939.1 CDS Bphyt_6241 NC_010676.1 2492645 2494891 R KEGG: tbd:Tbd_1289 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(2492645..2494891) Burkholderia phytofirmans PsJN 6278959 YP_001889940.1 CDS Bphyt_6242 NC_010676.1 2495276 2496595 D PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_6125 major facilitator superfamily MFS_1; major facilitator superfamily protein 2495276..2496595 Burkholderia phytofirmans PsJN 6279263 YP_001889941.1 CDS Bphyt_6243 NC_010676.1 2496646 2497614 D PFAM: dihydrodipicolinate synthetase; KEGG: bvi:Bcep1808_1425 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2496646..2497614 Burkholderia phytofirmans PsJN 6277744 YP_001889942.1 CDS Bphyt_6244 NC_010676.1 2497731 2498807 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_1422 regulatory protein, LacI; LacI family transcriptional regulator 2497731..2498807 Burkholderia phytofirmans PsJN 6279063 YP_001889943.1 CDS Bphyt_6245 NC_010676.1 2498948 2501521 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; KEGG: bxe:Bxe_B2006 periplasmic sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase complement(2498948..2501521) Burkholderia phytofirmans PsJN 6279088 YP_001889944.1 CDS Bphyt_6246 NC_010676.1 2501550 2502587 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: nfa:nfa14390 hypothetical protein; 3-oxoacyl-ACP synthase complement(2501550..2502587) Burkholderia phytofirmans PsJN 6279256 YP_001889945.1 CDS Bphyt_6247 NC_010676.1 2503173 2503370 D KEGG: bxe:Bxe_C1102 hypothetical protein; hypothetical protein 2503173..2503370 Burkholderia phytofirmans PsJN 6279257 YP_001889946.1 CDS Bphyt_6248 NC_010676.1 2503476 2503661 R KEGG: bxe:Bxe_B2790 hypothetical protein; hypothetical protein complement(2503476..2503661) Burkholderia phytofirmans PsJN 6277691 YP_001889947.1 CDS Bphyt_6249 NC_010676.1 2504446 2505516 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B2791 transcriptional regulator, AraC family; AraC family transcriptional regulator 2504446..2505516 Burkholderia phytofirmans PsJN 6278324 YP_001889948.1 CDS Bphyt_6250 NC_010676.1 2505891 2506118 D hypothetical protein 2505891..2506118 Burkholderia phytofirmans PsJN 6280264 YP_001889949.1 CDS Bphyt_6251 NC_010676.1 2506499 2507494 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B1739 transcriptional regulator, AraC family; AraC family transcriptional regulator 2506499..2507494 Burkholderia phytofirmans PsJN 6280168 YP_001889950.1 CDS Bphyt_6252 NC_010676.1 2507552 2508454 R PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: eba:ebA2273 putative dTDP-4-keto-L-rhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(2507552..2508454) Burkholderia phytofirmans PsJN 6277496 YP_001889951.1 CDS Bphyt_6253 NC_010676.1 2508454 2509002 R KEGG: bcm:Bcenmc03_0844 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(2508454..2509002) Burkholderia phytofirmans PsJN 6277643 YP_001889952.1 CDS Bphyt_6254 NC_010676.1 2508999 2509886 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bch:Bcen2424_0872 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase complement(2508999..2509886) Burkholderia phytofirmans PsJN 6280380 YP_001889953.1 CDS Bphyt_6255 NC_010676.1 2509890 2510951 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bur:Bcep18194_A3969 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(2509890..2510951) Burkholderia phytofirmans PsJN 6278492 YP_001889954.1 CDS Bphyt_6256 NC_010676.1 2511073 2512140 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A3868 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2511073..2512140) Burkholderia phytofirmans PsJN 6278049 YP_001889955.1 CDS Bphyt_6257 NC_010676.1 2512294 2513229 R KEGG: bpm:BURPS1710b_3262 arabinose-5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein complement(2512294..2513229) Burkholderia phytofirmans PsJN 6278947 YP_001889956.1 CDS Bphyt_6258 NC_010676.1 2513226 2514017 R KEGG: bur:Bcep18194_C7390 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(2513226..2514017) Burkholderia phytofirmans PsJN 6279752 YP_001889957.1 CDS Bphyt_6259 NC_010676.1 2514001 2514555 R TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: bte:BTH_I1361 possible phosphatase; YrbI family 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(2514001..2514555) Burkholderia phytofirmans PsJN 6279356 YP_001889958.1 CDS Bphyt_6260 NC_010676.1 2514552 2515412 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2514552..2515412) Burkholderia phytofirmans PsJN 6277823 YP_001889959.1 CDS Bphyt_6261 NC_010676.1 2515527 2517767 R KEGG: bte:BTH_I1354 exopolysaccharide tyrosine-protein kinase, putative; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; exopolysaccharide transport protein family protein complement(2515527..2517767) Burkholderia phytofirmans PsJN 6277588 YP_001889960.1 CDS Bphyt_6262 NC_010676.1 2517810 2518247 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bam:Bamb_6174 protein tyrosine phosphatase; protein tyrosine phosphatase complement(2517810..2518247) Burkholderia phytofirmans PsJN 6280110 YP_001889961.1 CDS Bphyt_6263 NC_010676.1 2518250 2519407 R PFAM: polysaccharide export protein; KEGG: rso:RSp1020 EPS I polysaccharide export outer membrane transmembrane protein; polysaccharide export protein complement(2518250..2519407) Burkholderia phytofirmans PsJN 6278826 YP_001889962.1 CDS Bphyt_6264 NC_010676.1 2519895 2521310 D TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bmu:Bmul_4919 undecaprenyl-phosphate glucose phosphotransferase; undecaprenyl-phosphate glucose phosphotransferase 2519895..2521310 Burkholderia phytofirmans PsJN 6277451 YP_001889963.1 CDS Bphyt_6265 NC_010676.1 2521458 2522597 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bxe:Bxe_A3721 putative epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2521458..2522597 Burkholderia phytofirmans PsJN 6277889 YP_001889964.1 CDS Bphyt_6266 NC_010676.1 2522628 2523494 D PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3185 glycosyl transferase, family 2; glycosyl transferase 2522628..2523494 Burkholderia phytofirmans PsJN 6279095 YP_001889965.1 CDS Bphyt_6267 NC_010676.1 2523542 2524822 D PFAM: Capsule polysaccharide biosynthesis protein; KEGG: cko:CKO_00746 hypothetical protein; capsular polysaccharide biosynthesis protein 2523542..2524822 Burkholderia phytofirmans PsJN 6277360 YP_001889966.1 CDS Bphyt_6268 NC_010676.1 2524830 2526194 D PFAM: polysaccharide biosynthesis protein; KEGG: sfu:Sfum_0777 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2524830..2526194 Burkholderia phytofirmans PsJN 6280100 YP_001889967.1 CDS Bphyt_6269 NC_010676.1 2526199 2526840 D KEGG: sbm:Shew185_2895 putative acetyltransferase; acetyltransferase 2526199..2526840 Burkholderia phytofirmans PsJN 6279710 YP_001889968.1 CDS Bphyt_6270 NC_010676.1 2526833 2528014 D hypothetical protein 2526833..2528014 Burkholderia phytofirmans PsJN 6277555 YP_001889969.1 CDS Bphyt_6271 NC_010676.1 2528164 2529597 D KEGG: bpd:BURPS668_3258 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2528164..2529597 Burkholderia phytofirmans PsJN 6277458 YP_001889970.1 CDS Bphyt_6272 NC_010676.1 2529795 2530574 D TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: cpe:CPE0496 N-acetyl-mannosamine transferase; WecB/TagA/CpsF family glycosyl transferase 2529795..2530574 Burkholderia phytofirmans PsJN 6278348 YP_001889971.1 CDS Bphyt_6273 NC_010676.1 2530596 2532107 D KEGG: bvu:BVU_0186 glycoside hydrolase family 28; hypothetical protein 2530596..2532107 Burkholderia phytofirmans PsJN 6279195 YP_001889972.1 CDS Bphyt_6274 NC_010676.1 2532209 2532394 R KEGG: bxe:Bxe_B2790 hypothetical protein; hypothetical protein complement(2532209..2532394) Burkholderia phytofirmans PsJN 6279149 YP_001889973.1 CDS Bphyt_6275 NC_010676.1 2532931 2533923 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_C1098 transcriptional regulator, AraC family; AraC family transcriptional regulator 2532931..2533923 Burkholderia phytofirmans PsJN 6279446 YP_001889974.1 CDS Bphyt_6276 NC_010676.1 2534355 2535236 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bxe:Bxe_A1334 UTP--glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 2534355..2535236 Burkholderia phytofirmans PsJN 6277437 YP_001889975.1 CDS Bphyt_6277 NC_010676.1 2535478 2535786 D KEGG: bxe:Bxe_B2793 hypothetical protein; hypothetical protein 2535478..2535786 Burkholderia phytofirmans PsJN 6279110 YP_001889976.1 CDS Bphyt_6278 NC_010676.1 2535852 2538593 R KEGG: bxe:Bxe_B0214 hypothetical protein; hypothetical protein complement(2535852..2538593) Burkholderia phytofirmans PsJN 6277521 YP_001889977.1 CDS Bphyt_6279 NC_010676.1 2538714 2539667 D PFAM: Indigoidine synthase A family protein; KEGG: reh:H16_B2031 indigoidine synthase A like protein; Indigoidine synthase A family protein 2538714..2539667 Burkholderia phytofirmans PsJN 6277702 YP_001889978.1 CDS Bphyt_6280 NC_010676.1 2539739 2540188 D KEGG: bur:Bcep18194_A5057 hypothetical protein; hypothetical protein 2539739..2540188 Burkholderia phytofirmans PsJN 6279817 YP_001889979.1 CDS Bphyt_6281 NC_010676.1 2540289 2540492 R KEGG: bxe:Bxe_A2486 hypothetical protein; hypothetical protein complement(2540289..2540492) Burkholderia phytofirmans PsJN 6279701 YP_001889980.1 CDS Bphyt_6282 NC_010676.1 2540780 2542069 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2718 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein complement(2540780..2542069) Burkholderia phytofirmans PsJN 6277672 YP_001889981.1 CDS Bphyt_6283 NC_010676.1 2542116 2543444 R PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_2715 major facilitator superfamily; major facilitator superfamily protein complement(2542116..2543444) Burkholderia phytofirmans PsJN 6279413 YP_001889982.1 CDS Bphyt_6284 NC_010676.1 2543665 2544939 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: dac:Daci_0254 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein complement(2543665..2544939) Burkholderia phytofirmans PsJN 6277455 YP_001889983.1 CDS Bphyt_6285 NC_010676.1 2545148 2545852 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pna:Pnap_1700 transcriptional regulator, GntR family; GntR family transcriptional regulator 2545148..2545852 Burkholderia phytofirmans PsJN 6279480 YP_001889984.1 CDS Bphyt_6286 NC_010676.1 2546132 2547094 R PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bch:Bcen2424_5910 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2546132..2547094) Burkholderia phytofirmans PsJN 6277484 YP_001889985.1 CDS Bphyt_6287 NC_010676.1 2547243 2547962 D PFAM: GCN5-related N-acetyltransferase; KEGG: bcm:Bcenmc03_1672 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2547243..2547962 Burkholderia phytofirmans PsJN 6277589 YP_001889986.1 CDS Bphyt_6288 NC_010676.1 2548117 2549310 R KEGG: aby:ABAYE2503 hypothetical protein; putative exported protein; hypothetical protein complement(2548117..2549310) Burkholderia phytofirmans PsJN 6277308 YP_001889987.1 CDS Bphyt_6289 NC_010676.1 2550548 2552365 D KEGG: bam:Bamb_3619 hypothetical protein; hypothetical protein 2550548..2552365 Burkholderia phytofirmans PsJN 6277503 YP_001889988.1 CDS Bphyt_6290 NC_010676.1 2552511 2553785 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: mlo:mlr4613 ECF-family sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(2552511..2553785) Burkholderia phytofirmans PsJN 6278399 YP_001889989.1 CDS Bphyt_6291 NC_010676.1 2553792 2554163 R PFAM: DGPFAETKE family protein; KEGG: mlo:mlr4612 hypothetical protein; DGPFAETKE family protein complement(2553792..2554163) Burkholderia phytofirmans PsJN 6279279 YP_001889990.1 CDS Bphyt_6292 NC_010676.1 2554288 2555199 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_5821 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2554288..2555199) Burkholderia phytofirmans PsJN 6280317 YP_001889991.1 CDS Bphyt_6293 NC_010676.1 2555341 2556312 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120336 putative transmembrane ABC transporter; binding-protein-dependent transport system inner membrane protein 2555341..2556312 Burkholderia phytofirmans PsJN 6279363 YP_001889992.1 CDS Bphyt_6294 NC_010676.1 2556309 2557220 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet0354 putative ABC-transporter permease; binding-protein-dependent transport system inner membrane protein 2556309..2557220 Burkholderia phytofirmans PsJN 6277471 YP_001889993.1 CDS Bphyt_6295 NC_010676.1 2557229 2558206 D KEGG: rme:Rmet_3155 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2557229..2558206 Burkholderia phytofirmans PsJN 6277330 YP_001889994.1 CDS Bphyt_6296 NC_010676.1 2558203 2559246 D KEGG: reu:Reut_A3002 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2558203..2559246 Burkholderia phytofirmans PsJN 6280481 YP_001889995.1 CDS Bphyt_6297 NC_010676.1 2559243 2560856 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc0044 probable substrate-binding periplasmic (PBP) ABC transporter protein; family 5 extracellular solute-binding protein 2559243..2560856 Burkholderia phytofirmans PsJN 6277625 YP_001889996.1 CDS Bphyt_6298 NC_010676.1 2560853 2562796 D PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: bra:BRADO1420 aminopeptidase; homologous to antibiotic hydrolase or cocain esterase; X-Pro dipeptidyl-peptidase domain-containing protein 2560853..2562796 Burkholderia phytofirmans PsJN 6280096 YP_001889997.1 CDS Bphyt_6299 NC_010676.1 2562979 2564088 D PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B0285 outer membrane protein (porin); porin 2562979..2564088 Burkholderia phytofirmans PsJN 6277322 YP_001889998.1 CDS Bphyt_6300 NC_010676.1 2564506 2565069 D catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent; involved in peptidoglycan synthesis; D-alanyl-D-alanine dipeptidase 2564506..2565069 Burkholderia phytofirmans PsJN 6280086 YP_001889999.1 CDS Bphyt_6301 NC_010676.1 2565134 2566741 D PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_C0197 ABC peptide/opine/nickel family transporter, periplasmic ligand binding protein; family 5 extracellular solute-binding protein 2565134..2566741 Burkholderia phytofirmans PsJN 6278549 YP_001890000.1 CDS Bphyt_6302 NC_010676.1 2566797 2567867 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C0196 ABC peptide/opine/nickel family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2566797..2567867 Burkholderia phytofirmans PsJN 6277506 YP_001890001.1 CDS Bphyt_6303 NC_010676.1 2567932 2568846 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C0195 ABC peptide/opine/nickel family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2567932..2568846 Burkholderia phytofirmans PsJN 6278574 YP_001890002.1 CDS Bphyt_6304 NC_010676.1 2568848 2569726 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C0194 ABC peptide/opine/nickel family transporter, ATPase subunit; ABC transporter-like protein 2568848..2569726 Burkholderia phytofirmans PsJN 6278067 YP_001890003.1 CDS Bphyt_6305 NC_010676.1 2569723 2570505 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C0193 ABC peptide/opine/nickel family transporter, ATPase subunit; ABC transporter-like protein 2569723..2570505 Burkholderia phytofirmans PsJN 6279984 YP_001890004.1 CDS Bphyt_6306 NC_010676.1 2570656 2571231 R PFAM: cytochrome B561; KEGG: bxe:Bxe_B2745 putative cytochrome b561; cytochrome B561 complement(2570656..2571231) Burkholderia phytofirmans PsJN 6278642 YP_001890005.1 CDS Bphyt_6307 NC_010676.1 2571438 2572127 R PFAM: CBS domain containing protein; KEGG: bxe:Bxe_A1873 hypothetical protein; signal transduction protein complement(2571438..2572127) Burkholderia phytofirmans PsJN 6278586 YP_001890006.1 CDS Bphyt_6308 NC_010676.1 2572491 2572757 R KEGG: bxe:Bxe_A1871 hypothetical protein; hypothetical protein complement(2572491..2572757) Burkholderia phytofirmans PsJN 6277502 YP_001890007.1 CDS Bphyt_6309 NC_010676.1 2573107 2574324 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bxe:Bxe_A1857 chromate transporter; chromate transporter chromate ion transporter 2573107..2574324 Burkholderia phytofirmans PsJN 6279579 YP_001890008.1 CDS Bphyt_6310 NC_010676.1 2574480 2576111 D in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 2574480..2576111 Burkholderia phytofirmans PsJN 6279953 YP_001890009.1 CDS Bphyt_6311 NC_010676.1 2576184 2577482 D PFAM: natural resistance-associated macrophage protein; KEGG: pnu:Pnuc_0529 putative manganese transport protein; natural resistance-associated macrophage protein 2576184..2577482 Burkholderia phytofirmans PsJN 6279050 YP_001890010.1 CDS Bphyt_6312 NC_010676.1 2577670 2578515 D PFAM: UspA domain protein; KEGG: bxe:Bxe_A1854 hypothetical protein; UspA domain-containing protein 2577670..2578515 Burkholderia phytofirmans PsJN 6278494 YP_001890011.1 CDS Bphyt_6313 NC_010676.1 2578739 2580085 D KEGG: bxe:Bxe_A1851 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 2578739..2580085 Burkholderia phytofirmans PsJN 6277499 YP_001890012.1 CDS Bphyt_6314 NC_010676.1 2580082 2580732 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_A1850 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2580082..2580732 Burkholderia phytofirmans PsJN 6279612 YP_001890013.1 CDS Bphyt_6315 NC_010676.1 2580955 2582166 D PFAM: cyclic nucleotide-binding; response regulator receiver; regulatory protein Crp; KEGG: bpd:BURPS668_A1636 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 2580955..2582166 Burkholderia phytofirmans PsJN 6277493 YP_001890014.1 CDS Bphyt_6316 NC_010676.1 2582248 2583234 R TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_A1844 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase family protein complement(2582248..2583234) Burkholderia phytofirmans PsJN 6277662 YP_001890015.1 CDS Bphyt_6317 NC_010676.1 2583329 2583604 R KEGG: bxe:Bxe_A1843 periplasmic protein of unknown function, DUF1488; hypothetical protein complement(2583329..2583604) Burkholderia phytofirmans PsJN 6280135 YP_001890016.1 CDS Bphyt_6318 NC_010676.1 2583850 2584185 D KEGG: bxe:Bxe_A1842 putative cytochrome c552; cytochrome c552 2583850..2584185 Burkholderia phytofirmans PsJN 6277945 YP_001890017.1 CDS Bphyt_6319 NC_010676.1 2584257 2584631 D KEGG: bxe:Bxe_A1841 hypothetical protein; hypothetical protein 2584257..2584631 Burkholderia phytofirmans PsJN 6279722 YP_001890018.1 CDS Bphyt_6320 NC_010676.1 2584669 2585100 D KEGG: bxe:Bxe_A1840 hypothetical protein; hypothetical protein 2584669..2585100 Burkholderia phytofirmans PsJN 6277685 YP_001890019.1 CDS Bphyt_6321 NC_010676.1 2585161 2585466 R KEGG: bxe:Bxe_B2344 hypothetical protein; hypothetical protein complement(2585161..2585466) Burkholderia phytofirmans PsJN 6280396 YP_001890020.1 CDS Bphyt_6322 NC_010676.1 2585487 2586428 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bxe:Bxe_B2345 putative DnaJ chaperone protein; heat shock protein DnaJ domain-containing protein complement(2585487..2586428) Burkholderia phytofirmans PsJN 6279254 YP_001890021.1 CDS Bphyt_6323 NC_010676.1 2586938 2587333 D TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: bvi:Bcep1808_1221 malonate transporter MadL subunit; malonate transporter MadL subunit 2586938..2587333 Burkholderia phytofirmans PsJN 6278254 YP_001890022.1 CDS Bphyt_6324 NC_010676.1 2587348 2588115 D TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: bur:Bcep18194_A4411 malonate/sodium symporter MadM subunit; malonate transporter MadM subunit 2587348..2588115 Burkholderia phytofirmans PsJN 6280508 YP_001890023.1 CDS Bphyt_6325 NC_010676.1 2588138 2588266 D hypothetical protein 2588138..2588266 Burkholderia phytofirmans PsJN 6277397 YP_001890024.1 CDS Bphyt_6326 NC_010676.1 2588278 2589192 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_0955 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2588278..2589192) Burkholderia phytofirmans PsJN 6279791 YP_001890025.1 CDS Bphyt_6328 NC_010676.1 2589479 2589787 R KEGG: bxe:Bxe_B2491 hypothetical protein; hypothetical protein complement(2589479..2589787) Burkholderia phytofirmans PsJN 6277781 YP_001890026.1 CDS Bphyt_6329 NC_010676.1 2589842 2591608 R KEGG: bmu:Bmul_4590 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; RecQ family ATP-dependent DNA helicase complement(2589842..2591608) Burkholderia phytofirmans PsJN 6277551 YP_001890027.1 CDS Bphyt_6330 NC_010676.1 2591942 2592772 R PFAM: protein of unknown function DUF72; KEGG: mrd:Mrad2831_5900 protein of unknown function DUF72; hypothetical protein complement(2591942..2592772) Burkholderia phytofirmans PsJN 6279354 YP_001890028.1 CDS Bphyt_6331 NC_010676.1 2593776 2594693 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_C1385 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2593776..2594693) Burkholderia phytofirmans PsJN 6277333 YP_001890029.1 CDS Bphyt_6332 NC_010676.1 2594796 2595545 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_C1384 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2594796..2595545 Burkholderia phytofirmans PsJN 6279094 YP_001890030.1 CDS Bphyt_6333 NC_010676.1 2595609 2596367 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cak:Caul_2869 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2595609..2596367 Burkholderia phytofirmans PsJN 6279971 YP_001890031.1 CDS Bphyt_6334 NC_010676.1 2596361 2596591 D KEGG: bvi:Bcep1808_4764 methyl-accepting chemotaxis sensory transducer; hypothetical protein 2596361..2596591 Burkholderia phytofirmans PsJN 6277440 YP_001890032.1 CDS Bphyt_6335 NC_010676.1 2596740 2598488 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: spe:Spro_3294 thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate TPP-binding domain-containing protein complement(2596740..2598488) Burkholderia phytofirmans PsJN 6277654 YP_001890033.1 CDS Bphyt_6336 NC_010676.1 2598795 2600540 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: har:HEAR3262 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(2598795..2600540) Burkholderia phytofirmans PsJN 6279283 YP_001890034.1 CDS Bphyt_6337 NC_010676.1 2600914 2601609 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azc:AZC_3045 putative short-chain dehydrogenase family protein; short-chain dehydrogenase/reductase SDR complement(2600914..2601609) Burkholderia phytofirmans PsJN 6279192 YP_001890035.1 CDS Bphyt_6338 NC_010676.1 2601630 2602970 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mes:Meso_4605 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2601630..2602970) Burkholderia phytofirmans PsJN 6277400 YP_001890036.1 CDS Bphyt_6339 NC_010676.1 2602994 2603791 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120734 putative ATP-binding component of ABC transporter; polar amino acid ABC transporter inner membrane subunit complement(2602994..2603791) Burkholderia phytofirmans PsJN 6278404 YP_001890037.1 CDS Bphyt_6340 NC_010676.1 2603846 2604658 R PFAM: extracellular solute-binding protein family 3; KEGG: smd:Smed_5882 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(2603846..2604658) Burkholderia phytofirmans PsJN 6277300 YP_001890038.1 CDS Bphyt_6341 NC_010676.1 2604692 2605393 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I1228 glutamate/aspartate ABC transporter, ATP-binding protein; ABC transporter-like protein complement(2604692..2605393) Burkholderia phytofirmans PsJN 6279325 YP_001890039.1 CDS Bphyt_6342 NC_010676.1 2605446 2606771 R PFAM: FAD dependent oxidoreductase; KEGG: mes:Meso_0567 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2605446..2606771) Burkholderia phytofirmans PsJN 6279474 YP_001890040.1 CDS Bphyt_6343 NC_010676.1 2606921 2607823 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2701 transcriptional regulator, LysR family; LysR family transcriptional regulator 2606921..2607823 Burkholderia phytofirmans PsJN 6278941 YP_001890041.1 CDS Bphyt_6344 NC_010676.1 2608095 2608340 D hypothetical protein 2608095..2608340 Burkholderia phytofirmans PsJN 6278349 YP_001890042.1 CDS Bphyt_6345 NC_010676.1 2609217 2610248 D TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: bcm:Bcenmc03_3126 cell shape determining protein, MreB/Mrl family; rod shape-determining protein MreB 2609217..2610248 Burkholderia phytofirmans PsJN 6279824 YP_001890043.1 CDS Bphyt_6346 NC_010676.1 2610376 2611092 D KEGG: bcm:Bcenmc03_0984 hypothetical protein; hypothetical protein 2610376..2611092 Burkholderia phytofirmans PsJN 6279659 YP_001890044.1 CDS Bphyt_6347 NC_010676.1 2611331 2611954 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0998 electron transfer flavoprotein, beta-subunit; electron transfer flavoprotein subunits alpha/beta complement(2611331..2611954) Burkholderia phytofirmans PsJN 6279706 YP_001890045.1 CDS Bphyt_6350 NC_010676.1 2612457 2613281 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mpt:Mpe_A3260 putative 2-hydroxyacid dehydrogenase family protein; D-isomer specific 2-hydroxyacid dehydrogenase 2612457..2613281 Burkholderia phytofirmans PsJN 6278377 YP_001890046.1 CDS Bphyt_6351 NC_010676.1 2613464 2614066 R stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA complement(2613464..2614066) Burkholderia phytofirmans PsJN 6279517 YP_001890047.1 CDS Bphyt_6352 NC_010676.1 2614604 2615428 D PFAM: protein of unknown function DUF849; KEGG: reu:Reut_A1631 protein of unknown function DUF849, prokaryotic; hypothetical protein 2614604..2615428 Burkholderia phytofirmans PsJN 6277381 YP_001890048.1 CDS Bphyt_6353 NC_010676.1 2615949 2616725 D PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: mex:Mext_2345 MOSC domain containing protein; MOSC domain-containing protein 2615949..2616725 Burkholderia phytofirmans PsJN 6278407 YP_001890049.1 CDS Bphyt_6354 NC_010676.1 2617311 2619323 D KEGG: mxa:MXAN_2150 beta-lactamase; hypothetical protein 2617311..2619323 Burkholderia phytofirmans PsJN 6280514 YP_001890050.1 CDS Bphyt_6355 NC_010676.1 2619350 2619613 D hypothetical protein 2619350..2619613 Burkholderia phytofirmans PsJN 6277768 YP_001890051.1 CDS Bphyt_6357 NC_010676.1 2620046 2620249 D hypothetical protein 2620046..2620249 Burkholderia phytofirmans PsJN 6279618 YP_001890052.1 CDS Bphyt_6358 NC_010676.1 2620268 2621038 R KEGG: reu:Reut_B5554 hypothetical protein; hypothetical protein complement(2620268..2621038) Burkholderia phytofirmans PsJN 6277916 YP_001890053.1 CDS Bphyt_6361 NC_010676.1 2622061 2623506 R PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: reu:Reut_B5704 permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease complement(2622061..2623506) Burkholderia phytofirmans PsJN 6277542 YP_001890054.1 CDS Bphyt_6362 NC_010676.1 2623781 2624755 R TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: reu:Reut_B5705 putative agmatinase; agmatinase complement(2623781..2624755) Burkholderia phytofirmans PsJN 6277514 YP_001890055.1 CDS Bphyt_6363 NC_010676.1 2625351 2626265 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B5706 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 2625351..2626265 Burkholderia phytofirmans PsJN 6279837 YP_001890056.1 CDS Bphyt_6365 NC_010676.1 2627548 2627955 D hypothetical protein 2627548..2627955 Burkholderia phytofirmans PsJN 6277558 YP_001890057.1 CDS Bphyt_6366 NC_010676.1 2628051 2629310 R PFAM: protein of unknown function DUF1504; KEGG: bcm:Bcenmc03_4249 protein of unknown function DUF1504; hypothetical protein complement(2628051..2629310) Burkholderia phytofirmans PsJN 6280270 YP_001890058.1 CDS Bphyt_6367 NC_010676.1 2629423 2630748 R PFAM: Chloride channel core; KEGG: bxe:Bxe_B2667 putative chloride-channel protein; chloride channel protein complement(2629423..2630748) Burkholderia phytofirmans PsJN 6278456 YP_001890059.1 CDS Bphyt_6368 NC_010676.1 2630874 2631539 R KEGG: sco:SCO7203 integral membrane protein; integral membrane protein complement(2630874..2631539) Burkholderia phytofirmans PsJN 6279201 YP_001890060.1 CDS Bphyt_6369 NC_010676.1 2631906 2632217 D hypothetical protein 2631906..2632217 Burkholderia phytofirmans PsJN 6277817 YP_001890061.1 CDS Bphyt_6371 NC_010676.1 2633991 2634347 D KEGG: psb:Psyr_1822 MscS mechanosensitive ion channel; hypothetical protein 2633991..2634347 Burkholderia phytofirmans PsJN 6279747 YP_001890062.1 CDS Bphyt_6372 NC_010676.1 2634516 2634770 R hypothetical protein complement(2634516..2634770) Burkholderia phytofirmans PsJN 6279547 YP_001890063.1 CDS Bphyt_6375 NC_010676.1 2636816 2637241 R PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_C6567 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(2636816..2637241) Burkholderia phytofirmans PsJN 6278256 YP_001890064.1 CDS Bphyt_6376 NC_010676.1 2637896 2638225 D PFAM: Domain of unknown function DUF1840; KEGG: bxe:Bxe_A4244 hypothetical protein; hypothetical protein 2637896..2638225 Burkholderia phytofirmans PsJN 6279525 YP_001890065.1 CDS Bphyt_6378 NC_010676.1 2638822 2639256 R PFAM: UspA domain protein; KEGG: bur:Bcep18194_A4735 universal stress protein, UspA family; UspA domain-containing protein complement(2638822..2639256) Burkholderia phytofirmans PsJN 6280249 YP_001890066.1 CDS Bphyt_6379 NC_010676.1 2639317 2639502 R KEGG: bur:Bcep18194_B2567 hypothetical protein; hypothetical protein complement(2639317..2639502) Burkholderia phytofirmans PsJN 6279712 YP_001890067.1 CDS Bphyt_6380 NC_010676.1 2639952 2640674 D KEGG: mrd:Mrad2831_3420 hypothetical protein; hypothetical protein 2639952..2640674 Burkholderia phytofirmans PsJN 6280297 YP_001890068.1 CDS Bphyt_6381 NC_010676.1 2640900 2641340 D KEGG: bxe:Bxe_B1992 hypothetical protein; hypothetical protein 2640900..2641340 Burkholderia phytofirmans PsJN 6277778 YP_001890069.1 CDS Bphyt_6382 NC_010676.1 2641395 2643185 R PFAM: glycoside hydrolase 15-related; KEGG: rpe:RPE_3714 glycoside hydrolase 15-related protein; glycoside hydrolase 15-like protein complement(2641395..2643185) Burkholderia phytofirmans PsJN 6278171 YP_001890070.1 CDS Bphyt_6383 NC_010676.1 2643242 2644240 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rxy:Rxyl_2751 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2643242..2644240) Burkholderia phytofirmans PsJN 6277735 YP_001890071.1 CDS Bphyt_6384 NC_010676.1 2644796 2645416 D KEGG: bxe:Bxe_A0414 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 2644796..2645416 Burkholderia phytofirmans PsJN 6279674 YP_001890072.1 CDS Bphyt_6385 NC_010676.1 2645615 2647447 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_A1836 pyruvate decarboxylase; thiamine pyrophosphate protein 2645615..2647447 Burkholderia phytofirmans PsJN 6278647 YP_001890073.1 CDS Bphyt_6386 NC_010676.1 2647458 2648579 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bxe:Bxe_C1285 putative mandelate racemase/muconate lactonizingenzyme; mandelate racemase/muconate lactonizing protein 2647458..2648579 Burkholderia phytofirmans PsJN 6278738 YP_001890074.1 CDS Bphyt_6387 NC_010676.1 2648597 2649601 D KEGG: bxe:Bxe_C1286 hypothetical protein; hypothetical protein 2648597..2649601 Burkholderia phytofirmans PsJN 6280036 YP_001890075.1 CDS Bphyt_6388 NC_010676.1 2649598 2650260 D KEGG: bxe:Bxe_C1287 hypothetical protein; hypothetical protein 2649598..2650260 Burkholderia phytofirmans PsJN 6277855 YP_001890076.1 CDS Bphyt_6389 NC_010676.1 2650253 2651896 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bxe:Bxe_C1288 putative dehydrogenase; glucose-methanol-choline oxidoreductase 2650253..2651896 Burkholderia phytofirmans PsJN 6278014 YP_001890077.1 CDS Bphyt_6390 NC_010676.1 2651980 2652126 R KEGG: bxe:Bxe_B1865 transposase IS66 family; transposase IS66 family complement(2651980..2652126) Burkholderia phytofirmans PsJN 6279800 YP_001890078.1 CDS Bphyt_6391 NC_010676.1 2653112 2653879 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_A2218 DNA-binding transcriptional dual regulator, glycolate-binding; DNA-binding transcriptional regulator GlcC complement(2653112..2653879) Burkholderia phytofirmans PsJN 6279396 YP_001890079.1 CDS Bphyt_6392 NC_010676.1 2654131 2655630 D TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A2219 glycolate oxidase subunit GlcD; glycolate oxidase subunit GlcD 2654131..2655630 Burkholderia phytofirmans PsJN 6277549 YP_001890080.1 CDS glcE NC_010676.1 2655630 2656697 D PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A2220 glycolate oxidase FAD binding subunit; glycolate oxidase FAD binding subunit 2655630..2656697 Burkholderia phytofirmans PsJN 6278917 YP_001890081.1 CDS glcF NC_010676.1 2656720 2657949 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_A2221 glycolate oxidase iron-sulfur subunit; glycolate oxidase iron-sulfur subunit 2656720..2657949 Burkholderia phytofirmans PsJN 6279820 YP_001890082.1 CDS Bphyt_6395 NC_010676.1 2657969 2658373 D PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A2222 conserved protein possibly involved in utilization of glycolate; hypothetical protein 2657969..2658373 Burkholderia phytofirmans PsJN 6279830 YP_001890083.1 CDS Bphyt_6396 NC_010676.1 2658495 2660669 D catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 2658495..2660669 Burkholderia phytofirmans PsJN 6280561 YP_001890084.1 CDS Bphyt_6398 NC_010676.1 2661422 2662196 D KEGG: bch:Bcen2424_0172 transposase and inactivated derivatives-like protein; hypothetical protein join(2661422..2661772,2661771..2662196) Burkholderia phytofirmans PsJN 6278414 YP_001890085.1 CDS Bphyt_6400 NC_010676.1 2662951 2663844 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_B1523 putative dehydrogenase; 2-hydroxy-3-oxopropionate reductase complement(2662951..2663844) Burkholderia phytofirmans PsJN 6279233 YP_001890086.1 CDS Bphyt_6401 NC_010676.1 2663902 2664882 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: acr:Acry_2055 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase complement(2663902..2664882) Burkholderia phytofirmans PsJN 6277627 YP_001890087.1 CDS Bphyt_6402 NC_010676.1 2664906 2666114 R PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mag:amb4454 L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase; L-lactate dehydrogenase complement(2664906..2666114) Burkholderia phytofirmans PsJN 6279550 YP_001890088.1 CDS Bphyt_6403 NC_010676.1 2666178 2667965 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(2666178..2667965) Burkholderia phytofirmans PsJN 6279420 YP_001890089.1 CDS Bphyt_6404 NC_010676.1 2668504 2669583 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A1471 outer membrane porin, OmpC family; porin 2668504..2669583 Burkholderia phytofirmans PsJN 6277356 YP_001890090.1 CDS Bphyt_6405 NC_010676.1 2669621 2670934 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azc:AZC_1489 general substrate transporter; major facilitator superfamily protein 2669621..2670934 Burkholderia phytofirmans PsJN 6278707 YP_001890091.1 CDS Bphyt_6406 NC_010676.1 2671058 2672203 R PFAM: porin Gram-negative type; KEGG: reu:Reut_B4825 porin, gram-negative type; porin complement(2671058..2672203) Burkholderia phytofirmans PsJN 6279456 YP_001890092.1 CDS Bphyt_6407 NC_010676.1 2672337 2673479 R PFAM: Extracellular ligand-binding receptor; KEGG: rme:Rmet_2867 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2672337..2673479) Burkholderia phytofirmans PsJN 6278639 YP_001890093.1 CDS Bphyt_6408 NC_010676.1 2673800 2674759 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_C0898 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2673800..2674759) Burkholderia phytofirmans PsJN 6278148 YP_001890094.1 CDS Bphyt_6409 NC_010676.1 2674922 2675215 D PFAM: protein of unknown function DUF1330; KEGG: bbr:BB3704 hypothetical protein; hypothetical protein 2674922..2675215 Burkholderia phytofirmans PsJN 6278157 YP_001890095.1 CDS Bphyt_6410 NC_010676.1 2675286 2676620 D PFAM: aminotransferase class-III; KEGG: rpd:RPD_2366 aminotransferase class-III; class III aminotransferase 2675286..2676620 Burkholderia phytofirmans PsJN 6278730 YP_001890096.1 CDS Bphyt_6411 NC_010676.1 2676634 2677422 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: swi:Swit_3267 hydroxypyruvate isomerase; hydroxypyruvate isomerase 2676634..2677422 Burkholderia phytofirmans PsJN 6280419 YP_001890097.1 CDS Bphyt_6412 NC_010676.1 2677626 2678576 D PFAM: inner-membrane translocator; KEGG: bpl:BURPS1106A_0989 ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein; inner-membrane translocator 2677626..2678576 Burkholderia phytofirmans PsJN 6278020 YP_001890098.1 CDS Bphyt_6413 NC_010676.1 2678591 2679760 D PFAM: inner-membrane translocator; KEGG: bte:BTH_I0786 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 2678591..2679760 Burkholderia phytofirmans PsJN 6279515 YP_001890099.1 CDS Bphyt_6414 NC_010676.1 2679779 2680555 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmn:BMA10247_0265 ABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, ATP-binding protein; ABC transporter-like protein 2679779..2680555 Burkholderia phytofirmans PsJN 6278637 YP_001890100.1 CDS Bphyt_6415 NC_010676.1 2680555 2681268 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_2541 ABC transporter related; ABC transporter-like protein 2680555..2681268 Burkholderia phytofirmans PsJN 6278025 YP_001890101.1 CDS Bphyt_6416 NC_010676.1 2681354 2682403 R PFAM: aryldialkylphosphatase; KEGG: bta:782020 phosphotriesterase related; aryldialkylphosphatase complement(2681354..2682403) Burkholderia phytofirmans PsJN 6278011 YP_001890102.1 CDS Bphyt_6417 NC_010676.1 2682419 2683750 R PFAM: aminotransferase class-III; KEGG: pol:Bpro_1467 aminotransferase class-III; class III aminotransferase complement(2682419..2683750) Burkholderia phytofirmans PsJN 6278708 YP_001890103.1 CDS Bphyt_6418 NC_010676.1 2684105 2684884 D PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: mlo:mll2260 probable tetracycline repressor protein; TetR family transcriptional regulator 2684105..2684884 Burkholderia phytofirmans PsJN 6279939 YP_001890104.1 CDS Bphyt_6420 NC_010676.1 2686893 2688293 D PFAM: Amidase; KEGG: bja:bll6413 indole acetimide hydrolase; amidase 2686893..2688293 Burkholderia phytofirmans PsJN 6277715 YP_001890105.1 CDS Bphyt_6421 NC_010676.1 2688727 2688951 R hypothetical protein complement(2688727..2688951) Burkholderia phytofirmans PsJN 6278705 YP_001890106.1 CDS Bphyt_6422 NC_010676.1 2689291 2690835 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bvi:Bcep1808_1563 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2689291..2690835) Burkholderia phytofirmans PsJN 6279777 YP_001890107.1 CDS Bphyt_6423 NC_010676.1 2691818 2692837 R PFAM: aldo/keto reductase; KEGG: atc:AGR_pAT_274 putative oxidoreductase protein; aldo/keto reductase complement(2691818..2692837) Burkholderia phytofirmans PsJN 6280425 YP_001890108.1 CDS Bphyt_6424 NC_010676.1 2692930 2693796 R PFAM: TrkA-N domain protein; NmrA family protein; KEGG: bam:Bamb_6112 NmrA family protein; NmrA family protein complement(2692930..2693796) Burkholderia phytofirmans PsJN 6277772 YP_001890109.1 CDS Bphyt_6425 NC_010676.1 2693845 2695158 R PFAM: beta-lactamase; KEGG: rpb:RPB_0579 beta-lactamase; beta-lactamase complement(2693845..2695158) Burkholderia phytofirmans PsJN 6278930 YP_001890110.1 CDS Bphyt_6426 NC_010676.1 2695517 2696431 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bch:Bcen2424_5908 transcriptional regulator, LysR family; LysR family transcriptional regulator 2695517..2696431 Burkholderia phytofirmans PsJN 6278321 YP_001890111.1 CDS Bphyt_6427 NC_010676.1 2696756 2697769 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ppw:PputW619_1692 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(2696756..2697769) Burkholderia phytofirmans PsJN 6278684 YP_001890112.1 CDS Bphyt_6430 NC_010676.1 2699965 2701002 R PFAM: Integrase catalytic region; KEGG: gdi:GDI2819 putative transposase; integrase catalytic subunit complement(2699965..2701002) Burkholderia phytofirmans PsJN 6278702 YP_001890113.1 CDS Bphyt_6433 NC_010676.1 2702140 2702664 R PFAM: transferase hexapeptide repeat containing protein; KEGG: bur:Bcep18194_A5409 carbonic anhydrase/acetyltransferaseisoleucine patch superfamily; transferase hexapeptide repeat containing protein complement(2702140..2702664) Burkholderia phytofirmans PsJN 6279084 YP_001890114.1 CDS Bphyt_6434 NC_010676.1 2702708 2704129 R PFAM: Na+/solute symporter; KEGG: psp:PSPPH_3436 probable sodium/solute symporter; Na+/solute symporter complement(2702708..2704129) Burkholderia phytofirmans PsJN 6278196 YP_001890115.1 CDS Bphyt_6435 NC_010676.1 2704359 2705606 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pol:Bpro_5106 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2704359..2705606) Burkholderia phytofirmans PsJN 6279728 YP_001890116.1 CDS Bphyt_6436 NC_010676.1 2705635 2707239 R PFAM: FAD linked oxidase domain protein; KEGG: pol:Bpro_5107 FAD linked oxidase-like; FAD linked oxidase domain-containing protein complement(2705635..2707239) Burkholderia phytofirmans PsJN 6279555 YP_001890117.1 CDS Bphyt_6437 NC_010676.1 2708016 2709197 D PFAM: iron-containing alcohol dehydrogenase; KEGG: acr:Acry_0242 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2708016..2709197 Burkholderia phytofirmans PsJN 6279204 YP_001890118.1 CDS Bphyt_6438 NC_010676.1 2709232 2709573 D PFAM: NIPSNAP family containing protein; KEGG: dac:Daci_0041 NIPSNAP family containing protein; NIPSNAP family containing protein 2709232..2709573 Burkholderia phytofirmans PsJN 6280197 YP_001890119.1 CDS Bphyt_6440 NC_010676.1 2711722 2713248 D PFAM: Integrase catalytic region; KEGG: bxe:Bxe_A1791 putative transposase catalytic subunit; integrase catalytic subunit 2711722..2713248 Burkholderia phytofirmans PsJN 6279845 YP_001890120.1 CDS Bphyt_6441 NC_010676.1 2713251 2714039 D PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1792 putative transposase-related ATP-binding protein; IstB domain-containing protein ATP-binding protein 2713251..2714039 Burkholderia phytofirmans PsJN 6279455 YP_001890121.1 CDS Bphyt_6442 NC_010676.1 2714416 2714721 R PFAM: IS66 Orf2 family protein; KEGG: bte:BTH_I3141 TnpB protein; IS66 Orf2 family protein complement(2714416..2714721) Burkholderia phytofirmans PsJN 6278046 YP_001890122.1 CDS Bphyt_6443 NC_010676.1 2714730 2715131 R PFAM: transposase IS3/IS911 family protein; KEGG: bte:BTH_I3142 hypothetical protein; transposase IS3/IS911 family protein complement(2714730..2715131) Burkholderia phytofirmans PsJN 6280447 YP_001890123.1 CDS Bphyt_6445 NC_010676.1 2715842 2717470 R PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_1766 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2715842..2717470) Burkholderia phytofirmans PsJN 6280409 YP_001890124.1 CDS Bphyt_6446 NC_010676.1 2717481 2718260 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sfu:Sfum_0112 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2717481..2718260) Burkholderia phytofirmans PsJN 6278455 YP_001890125.1 CDS Bphyt_6447 NC_010676.1 2718257 2719117 R PFAM: amidohydrolase 2; KEGG: bxe:Bxe_C0918 amidohydrolase 2; amidohydrolase 2 complement(2718257..2719117) Burkholderia phytofirmans PsJN 6280363 YP_001890126.1 CDS Bphyt_6448 NC_010676.1 2719403 2720071 D PFAM: regulatory protein TetR; KEGG: gtn:GTNG_3337 transcriptional regulator TetR family; TetR family transcriptional regulator 2719403..2720071 Burkholderia phytofirmans PsJN 6280232 YP_001890127.1 CDS Bphyt_6449 NC_010676.1 2720068 2721003 R PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rru:Rru_A1833 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase complement(2720068..2721003) Burkholderia phytofirmans PsJN 6279975 YP_001890128.1 CDS Bphyt_6450 NC_010676.1 2721032 2722984 R PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C7333 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2721032..2722984) Burkholderia phytofirmans PsJN 6278372 YP_001890129.1 CDS Bphyt_6451 NC_010676.1 2723004 2723735 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpt:Bpet1165 putative branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein complement(2723004..2723735) Burkholderia phytofirmans PsJN 6280093 YP_001890130.1 CDS Bphyt_6452 NC_010676.1 2723732 2724493 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB0369 ABC transport system ATP-binding protein; ABC transporter-like protein complement(2723732..2724493) Burkholderia phytofirmans PsJN 6280383 YP_001890131.1 CDS Bphyt_6453 NC_010676.1 2724490 2725470 R PFAM: inner-membrane translocator; KEGG: bpt:Bpet1167 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator complement(2724490..2725470) Burkholderia phytofirmans PsJN 6280248 YP_001890132.1 CDS Bphyt_6454 NC_010676.1 2725457 2726353 R PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_C7596 ABC branched-chain amino acid family transporter, inner-membrane subunit; inner-membrane translocator complement(2725457..2726353) Burkholderia phytofirmans PsJN 6278638 YP_001890133.1 CDS Bphyt_6455 NC_010676.1 2726400 2727593 R KEGG: bbr:BB0366 hypothetical protein; hypothetical protein complement(2726400..2727593) Burkholderia phytofirmans PsJN 6277825 YP_001890134.1 CDS Bphyt_6456 NC_010676.1 2727645 2728400 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB0371 putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2727645..2728400) Burkholderia phytofirmans PsJN 6279134 YP_001890135.1 CDS Bphyt_6457 NC_010676.1 2729015 2729917 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bpd:BURPS668_A2013 hypothetical oxidoreductase YgbJ; 3-hydroxyisobutyrate dehydrogenase complement(2729015..2729917) Burkholderia phytofirmans PsJN 6277807 YP_001890136.1 CDS Bphyt_6458 NC_010676.1 2730124 2731107 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mlo:mlr3367 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 2730124..2731107 Burkholderia phytofirmans PsJN 6279835 YP_001890137.1 CDS Bphyt_6459 NC_010676.1 2731170 2732303 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: reu:Reut_C5897 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 2731170..2732303 Burkholderia phytofirmans PsJN 6277416 YP_001890138.1 CDS Bphyt_6460 NC_010676.1 2732352 2732750 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_C0505 hypothetical protein; cupin 2732352..2732750 Burkholderia phytofirmans PsJN 6279905 YP_001890139.1 CDS Bphyt_6461 NC_010676.1 2732882 2733655 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rme:Rmet_5550 GntR-like protein; GntR family transcriptional regulator complement(2732882..2733655) Burkholderia phytofirmans PsJN 6278983 YP_001890140.1 CDS Bphyt_6462 NC_010676.1 2734802 2736163 D PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_3414 MFS transporter, phthalate permease family; major facilitator superfamily protein 2734802..2736163 Burkholderia phytofirmans PsJN 6278981 YP_001890141.1 CDS Bphyt_6464 NC_010676.1 2738498 2738713 R KEGG: bpt:Bpet3764 hypothetical protein; hypothetical protein complement(2738498..2738713) Burkholderia phytofirmans PsJN 6278680 YP_001890142.1 CDS Bphyt_6465 NC_010676.1 2738715 2739572 R SMART: AAA ATPase; KEGG: bxe:Bxe_C0709 putative ATPase; AAA ATPase complement(2738715..2739572) Burkholderia phytofirmans PsJN 6278277 YP_001890143.1 CDS Bphyt_6466 NC_010676.1 2739569 2741005 R PFAM: Integrase catalytic region; KEGG: bpt:Bpet3758 putative transposase; integrase catalytic subunit complement(2739569..2741005) Burkholderia phytofirmans PsJN 6277722 YP_001890144.1 CDS Bphyt_6467 NC_010676.1 2741104 2741682 R KEGG: bpt:Bpet3757 hypothetical protein; hypothetical protein complement(2741104..2741682) Burkholderia phytofirmans PsJN 6278706 YP_001890145.1 CDS Bphyt_6468 NC_010676.1 2741783 2744374 R SMART: DEAD-like helicases; KEGG: gme:Gmet_3058 helicase-like; DEAD/DEAH box helicase complement(2741783..2744374) Burkholderia phytofirmans PsJN 6277928 YP_001890146.1 CDS Bphyt_6469 NC_010676.1 2744371 2746176 R KEGG: gme:Gmet_3059 hypothetical protein; hypothetical protein complement(2744371..2746176) Burkholderia phytofirmans PsJN 6277917 YP_001890147.1 CDS Bphyt_6470 NC_010676.1 2746173 2747369 R KEGG: gme:Gmet_3060 hypothetical protein; hypothetical protein complement(2746173..2747369) Burkholderia phytofirmans PsJN 6278228 YP_001890148.1 CDS Bphyt_6471 NC_010676.1 2747468 2753842 R KEGG: fjo:Fjoh_3535 hypothetical protein; hypothetical protein complement(2747468..2753842) Burkholderia phytofirmans PsJN 6279535 YP_001890149.1 CDS Bphyt_6472 NC_010676.1 2753998 2755251 R KEGG: fre:Franean1_2654 hypothetical protein; hypothetical protein complement(2753998..2755251) Burkholderia phytofirmans PsJN 6277717 YP_001890150.1 CDS Bphyt_6473 NC_010676.1 2755336 2757954 R PFAM: UvrD/REP helicase; KEGG: pfo:Pfl_2672 UvrD/REP helicase; UvrD/REP helicase complement(2755336..2757954) Burkholderia phytofirmans PsJN 6277720 YP_001890151.1 CDS Bphyt_6474 NC_010676.1 2758173 2761295 R KEGG: ret:RHE_CH02008 hypothetical protein; hypothetical protein complement(2758173..2761295) Burkholderia phytofirmans PsJN 6279673 YP_001890152.1 CDS Bphyt_6475 NC_010676.1 2761364 2763250 R KEGG: bxe:Bxe_A1801 hypothetical protein; hypothetical protein complement(2761364..2763250) Burkholderia phytofirmans PsJN 6278606 YP_001890153.1 CDS Bphyt_6476 NC_010676.1 2763247 2765535 R KEGG: bxe:Bxe_A1800 predicted ATP-dependent endonuclease, OLD family; OLD family ATP-dependent endonuclease complement(2763247..2765535) Burkholderia phytofirmans PsJN 6279093 YP_001890154.1 CDS Bphyt_6477 NC_010676.1 2766245 2766616 D PFAM: protein of unknown function DUF932; KEGG: bxe:Bxe_A2571 putative F plasmid gene 32-like protein; hypothetical protein 2766245..2766616 Burkholderia phytofirmans PsJN 6280282 YP_001890155.1 CDS Bphyt_6478 NC_010676.1 2766656 2768104 D PFAM: integrase family protein; KEGG: xac:XAC3932 integrase/recombinase; integrase family protein 2766656..2768104 Burkholderia phytofirmans PsJN 6278622 YP_001890156.1 CDS Bphyt_6479 NC_010676.1 2768101 2769984 D PFAM: integrase family protein; KEGG: psa:PST_0586 hypothetical protein; integrase family protein 2768101..2769984 Burkholderia phytofirmans PsJN 6279387 YP_001890157.1 CDS Bphyt_6480 NC_010676.1 2769981 2771864 D PFAM: integrase family protein; KEGG: psa:PST_0587 site-specific recombinase, phage integrase family; integrase family protein 2769981..2771864 Burkholderia phytofirmans PsJN 6280551 YP_001890158.1 CDS Bphyt_6481 NC_010676.1 2771861 2772223 D hypothetical protein 2771861..2772223 Burkholderia phytofirmans PsJN 6278180 YP_001890159.1 CDS Bphyt_6482 NC_010676.1 2772276 2772866 D PFAM: protein of unknown function DUF932; KEGG: bxe:Bxe_A1782 putative F plasmid gene 32-like protein; hypothetical protein 2772276..2772866 Burkholderia phytofirmans PsJN 6278545 YP_001890160.1 CDS Bphyt_6483 NC_010676.1 2772991 2775213 D PFAM: ParB domain protein nuclease; KEGG: bxe:Bxe_A2572 putative chromosome partitioning nuclease, ParB; ParB domain-containing protein nuclease 2772991..2775213 Burkholderia phytofirmans PsJN 6279239 YP_001890161.1 CDS Bphyt_6484 NC_010676.1 2775208 2775978 R KEGG: bxe:Bxe_A2573 hypothetical protein; hypothetical protein complement(2775208..2775978) Burkholderia phytofirmans PsJN 6279180 YP_001890162.1 CDS Bphyt_6485 NC_010676.1 2775971 2776663 R KEGG: bxe:Bxe_C0474 hypothetical protein; hypothetical protein complement(2775971..2776663) Burkholderia phytofirmans PsJN 6280389 YP_001890163.1 CDS Bphyt_6486 NC_010676.1 2776674 2777135 R KEGG: bxe:Bxe_C0473 hypothetical protein; hypothetical protein complement(2776674..2777135) Burkholderia phytofirmans PsJN 6278063 YP_001890164.1 CDS Bphyt_6487 NC_010676.1 2777911 2778282 R KEGG: bmu:Bmul_5613 hypothetical protein; hypothetical protein complement(2777911..2778282) Burkholderia phytofirmans PsJN 6279565 YP_001890165.1 CDS Bphyt_6488 NC_010676.1 2778306 2778629 R SMART: helix-turn-helix domain protein; KEGG: sgl:SG0777 hypothetical protein; XRE family transcriptional regulator complement(2778306..2778629) Burkholderia phytofirmans PsJN 6278533 YP_001890166.1 CDS Bphyt_6489 NC_010676.1 2778833 2779324 D hypothetical protein 2778833..2779324 Burkholderia phytofirmans PsJN 6277712 YP_001890167.1 CDS Bphyt_6490 NC_010676.1 2779468 2779896 D KEGG: bxe:Bxe_A2636a hypothetical protein; hypothetical protein 2779468..2779896 Burkholderia phytofirmans PsJN 6279411 YP_001890168.1 CDS Bphyt_6491 NC_010676.1 2780146 2781159 R KEGG: bxe:Bxe_A2643 putative DNA relaxase/nickase, TraS/VirD2-like; DNA relaxase/nickase, TraS/VirD2-like protein complement(2780146..2781159) Burkholderia phytofirmans PsJN 6280494 YP_001890169.1 CDS Bphyt_6492 NC_010676.1 2781161 2781697 R KEGG: bxe:Bxe_A1767 plasmid-related protein; plasmid-like protein complement(2781161..2781697) Burkholderia phytofirmans PsJN 6278690 YP_001890170.1 CDS Bphyt_6493 NC_010676.1 2781706 2783229 R KEGG: bxe:Bxe_A2645 putative DNA primase, DNA transfer TraO-like protein; DNA primase, DNA transfer TraO-like protein complement(2781706..2783229) Burkholderia phytofirmans PsJN 6278595 YP_001890171.1 CDS Bphyt_6494 NC_010676.1 2783281 2785146 R PFAM: Primase 2; KEGG: bxe:Bxe_A2646 putative DNA replication primase protein; primase 2 complement(2783281..2785146) Burkholderia phytofirmans PsJN 6279049 YP_001890172.1 CDS Bphyt_6495 NC_010676.1 2785143 2786894 R PFAM: TRAG family protein; KEGG: bxe:Bxe_A2647 putative type IV secretory pathway protein VirD4; TRAG family protein complement(2785143..2786894) Burkholderia phytofirmans PsJN 6279833 YP_001890173.1 CDS Bphyt_6496 NC_010676.1 2786891 2787295 R KEGG: bxe:Bxe_A2648 hypothetical protein; hypothetical protein complement(2786891..2787295) Burkholderia phytofirmans PsJN 6279803 YP_001890174.1 CDS Bphyt_6497 NC_010676.1 2787303 2788421 R TIGRFAM: P-type DNA transfer ATPase VirB11; PFAM: type II secretion system protein E; KEGG: bxe:Bxe_A1762 putative type IV secretion system protein VirB11; P-type DNA transfer ATPase VirB11 complement(2787303..2788421) Burkholderia phytofirmans PsJN 6280138 YP_001890175.1 CDS Bphyt_6498 NC_010676.1 2788418 2789662 R PFAM: conjugation TrbI family protein; KEGG: bxe:Bxe_A2650 putative type IV secretion system protein VirB10; conjugation TrbI family protein complement(2788418..2789662) Burkholderia phytofirmans PsJN 6280280 YP_001890176.1 CDS Bphyt_6499 NC_010676.1 2789655 2790485 R PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bxe:Bxe_A1760 putative type IV secretion system protein VirB9; conjugal transfer protein TrbG/VirB9/CagX complement(2789655..2790485) Burkholderia phytofirmans PsJN 6280311 YP_001890177.1 CDS Bphyt_6500 NC_010676.1 2790482 2791186 R PFAM: VirB8 family protein; KEGG: bxe:Bxe_A1759 putative type IV secretion system protein VirB8/TraJ; VirB8 family protein complement(2790482..2791186) Burkholderia phytofirmans PsJN 6279601 YP_001890178.1 CDS Bphyt_6501 NC_010676.1 2791183 2791359 R hypothetical protein complement(2791183..2791359) Burkholderia phytofirmans PsJN 6278871 YP_001890179.1 CDS Bphyt_6502 NC_010676.1 2791370 2792065 R TIGRFAM: P-type DNA transfer protein VirB5; PFAM: type IV secretion system family protein; KEGG: bxe:Bxe_A2653 putative type IV secretion system protein VirB5/TraF; P-type DNA transfer protein VirB5 complement(2791370..2792065) Burkholderia phytofirmans PsJN 6277736 YP_001890180.1 CDS Bphyt_6503 NC_010676.1 2792080 2793240 R PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: bxe:Bxe_A2654 putative type IV secretion system protein VirB6/TraH; TrbL/VirB6 plasmid conjugal transfer protein complement(2792080..2793240) Burkholderia phytofirmans PsJN 6278993 YP_001890181.1 CDS Bphyt_6504 NC_010676.1 2793237 2795702 R TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: bxe:Bxe_A2655 putative type IV secretion system protein VirB4/TraE; type IV secretion/conjugal transfer ATPase complement(2793237..2795702) Burkholderia phytofirmans PsJN 6279917 YP_001890182.1 CDS Bphyt_6505 NC_010676.1 2795704 2796048 R PFAM: type IV secretory pathway VirB3 family protein; KEGG: bxe:Bxe_A2656 putative type IV secretion system protein VirB3/TraD; type IV secretory pathway VirB3 family protein complement(2795704..2796048) Burkholderia phytofirmans PsJN 6278141 YP_001890183.1 CDS Bphyt_6506 NC_010676.1 2796065 2796406 R PFAM: Conjugal transfer protein TrbC; KEGG: bxe:Bxe_A2657 putative type IV secretion system protein VirB2/TraC; conjugal transfer protein TrbC complement(2796065..2796406) Burkholderia phytofirmans PsJN 6278695 YP_001890184.1 CDS Bphyt_6507 NC_010676.1 2796448 2797095 R PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A2658 putative conjugal transfer protein, VirB1/TraA like; lytic transglycosylase complement(2796448..2797095) Burkholderia phytofirmans PsJN 6280119 YP_001890185.1 CDS Bphyt_6508 NC_010676.1 2797092 2797667 R KEGG: bxe:Bxe_A2659 hypothetical protein; hypothetical protein complement(2797092..2797667) Burkholderia phytofirmans PsJN 6277761 YP_001890186.1 CDS Bphyt_6509 NC_010676.1 2797757 2797864 R hypothetical protein complement(2797757..2797864) Burkholderia phytofirmans PsJN 6278515 YP_001890187.1 CDS Bphyt_6510 NC_010676.1 2798000 2798284 R KEGG: bxe:Bxe_A2661 hypothetical protein; hypothetical protein complement(2798000..2798284) Burkholderia phytofirmans PsJN 6280327 YP_001890188.1 CDS Bphyt_6511 NC_010676.1 2798277 2798510 R PFAM: Prophage CP4-57 regulatory; KEGG: bxe:Bxe_A2662 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA complement(2798277..2798510) Burkholderia phytofirmans PsJN 6279479 YP_001890189.1 CDS Bphyt_6512 NC_010676.1 2798627 2799163 R KEGG: bxe:Bxe_A2663 hypothetical protein; hypothetical protein complement(2798627..2799163) Burkholderia phytofirmans PsJN 6280511 YP_001890190.1 CDS Bphyt_6513 NC_010676.1 2799401 2799799 R KEGG: bxe:Bxe_A1749 hypothetical protein; hypothetical protein complement(2799401..2799799) Burkholderia phytofirmans PsJN 6280526 YP_001890191.1 CDS Bphyt_6514 NC_010676.1 2800014 2800958 D PFAM: fatty acid desaturase; KEGG: bxe:Bxe_A1748 putative fatty acid desaturase; fatty acid desaturase 2800014..2800958 Burkholderia phytofirmans PsJN 6280323 YP_001890192.1 CDS Bphyt_6515 NC_010676.1 2800951 2802198 D KEGG: bxe:Bxe_A2669 hypothetical protein; hypothetical protein 2800951..2802198 Burkholderia phytofirmans PsJN 6280530 YP_001890193.1 CDS Bphyt_6516 NC_010676.1 2802808 2803740 R specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein complement(2802808..2803740) Burkholderia phytofirmans PsJN 6280492 YP_001890194.1 CDS Bphyt_6518 NC_010676.1 2805165 2806709 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bmn:BMA10247_2862 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2805165..2806709 Burkholderia phytofirmans PsJN 6278245 YP_001890195.1 CDS Bphyt_6519 NC_010676.1 2807169 2807399 D KEGG: eba:p1B209 hypothetical protein; hypothetical protein 2807169..2807399 Burkholderia phytofirmans PsJN 6278895 YP_001890196.1 CDS Bphyt_6520 NC_010676.1 2807479 2807787 D KEGG: pol:Bpro_5039 hypothetical protein; hypothetical protein 2807479..2807787 Burkholderia phytofirmans PsJN 6279046 YP_001890197.1 CDS Bphyt_6521 NC_010676.1 2807776 2809371 R PFAM: transposase IS66; KEGG: bxe:Bxe_A3778 hypothetical protein; transposase IS66 complement(2807776..2809371) Burkholderia phytofirmans PsJN 6279536 YP_001890198.1 CDS Bphyt_6523 NC_010676.1 2809765 2810202 R PFAM: transposase IS3/IS911 family protein; KEGG: bxe:Bxe_A3776 putative transposase; transposase IS3/IS911 family protein complement(2809765..2810202) Burkholderia phytofirmans PsJN 6278800 YP_001890199.1 CDS Bphyt_6524 NC_010676.1 2811098 2812048 R PFAM: protein of unknown function DUF979; KEGG: reh:H16_A0128 conserved membrane protein of unknown function; hypothetical protein complement(2811098..2812048) Burkholderia phytofirmans PsJN 6278676 YP_001890200.1 CDS Bphyt_6525 NC_010676.1 2812045 2812782 R PFAM: protein of unknown function DUF969; KEGG: bxe:Bxe_A0192 membrane protein; hypothetical protein complement(2812045..2812782) Burkholderia phytofirmans PsJN 6278026 YP_001890201.1 CDS Bphyt_6526 NC_010676.1 2813224 2814414 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(2813224..2814414) Burkholderia phytofirmans PsJN 6280278 YP_001890202.1 CDS Bphyt_6528 NC_010676.1 2815297 2816085 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bmu:Bmul_5654 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein complement(2815297..2816085) Burkholderia phytofirmans PsJN 6277327 YP_001890203.1 CDS Bphyt_6529 NC_010676.1 2816092 2817630 R PFAM: Integrase catalytic region; KEGG: bmu:Bmul_6239 integrase catalytic region; integrase catalytic subunit complement(2816092..2817630) Burkholderia phytofirmans PsJN 6277490 YP_001890204.1 CDS Bphyt_6530 NC_010676.1 2818258 2818383 R hypothetical protein complement(2818258..2818383) Burkholderia phytofirmans PsJN 6277707 YP_001890205.1 CDS Bphyt_6531 NC_010676.1 2818389 2819576 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A0475 outer membrane protein (porin); porin complement(2818389..2819576) Burkholderia phytofirmans PsJN 6277316 YP_001890206.1 CDS Bphyt_6532 NC_010676.1 2819758 2820882 R PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_4345 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2819758..2820882) Burkholderia phytofirmans PsJN 6277814 YP_001890207.1 CDS Bphyt_6533 NC_010676.1 2820879 2822294 R PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_4341 BFD-like (2Fe-2S)-binding region; BFD (2Fe-2S)-binding domain-containing protein complement(2820879..2822294) Burkholderia phytofirmans PsJN 6278992 YP_001890208.1 CDS Bphyt_6534 NC_010676.1 2822278 2822670 R KEGG: pol:Bpro_4342 putative sarcosine oxidase alpha subunit; hypothetical protein complement(2822278..2822670) Burkholderia phytofirmans PsJN 6277852 YP_001890209.1 CDS Bphyt_6535 NC_010676.1 2823288 2825036 R PFAM: Hydantoinase B/oxoprolinase; KEGG: swi:Swit_0476 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase complement(2823288..2825036) Burkholderia phytofirmans PsJN 6277851 YP_001890210.1 CDS Bphyt_6536 NC_010676.1 2825086 2827122 R PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: swi:Swit_0475 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase complement(2825086..2827122) Burkholderia phytofirmans PsJN 6280501 YP_001890211.1 CDS Bphyt_6537 NC_010676.1 2827411 2827881 R PFAM: regulatory protein AsnC/Lrp family; KEGG: pst:PSPTO_0321 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2827411..2827881) Burkholderia phytofirmans PsJN 6278356 YP_001890212.1 CDS Bphyt_6538 NC_010676.1 2828015 2828419 D KEGG: dac:Daci_0244 LrgA family protein; LrgA family protein 2828015..2828419 Burkholderia phytofirmans PsJN 6279741 YP_001890213.1 CDS Bphyt_6539 NC_010676.1 2828416 2829096 D PFAM: LrgB family protein; KEGG: cvi:CV_1152 probable membrane protein; LrgB family protein 2828416..2829096 Burkholderia phytofirmans PsJN 6278971 YP_001890214.1 CDS Bphyt_6540 NC_010676.1 2829346 2830158 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2705 ABC spermidine/putrescine family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2829346..2830158) Burkholderia phytofirmans PsJN 6277920 YP_001890215.1 CDS Bphyt_6541 NC_010676.1 2830173 2831045 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2704 ABC spermidine/putrescine family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2830173..2831045) Burkholderia phytofirmans PsJN 6279643 YP_001890216.1 CDS Bphyt_6542 NC_010676.1 2831032 2832120 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2703 ABC spermidine/putrescine family transporter, ATPase subunit; ABC transporter-like protein complement(2831032..2832120) Burkholderia phytofirmans PsJN 6279978 YP_001890217.1 CDS Bphyt_6543 NC_010676.1 2832193 2833416 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2702 ABC spermidine/putrescine family transporter, periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(2832193..2833416) Burkholderia phytofirmans PsJN 6277827 YP_001890218.1 CDS Bphyt_6544 NC_010676.1 2833584 2834501 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ecv:APECO1_3667 transcriptional activator protein LysR; LysR family transcriptional regulator 2833584..2834501 Burkholderia phytofirmans PsJN 6278938 YP_001890219.1 CDS Bphyt_6546 NC_010676.1 2835674 2836999 R KEGG: rru:Rru_A3316 phage integrase; hypothetical protein complement(2835674..2836999) Burkholderia phytofirmans PsJN 6280115 YP_001890220.1 CDS Bphyt_6547 NC_010676.1 2837285 2838652 R PFAM: integrase family protein; KEGG: bxe:Bxe_A1709 putative phage integrase; integrase family protein complement(2837285..2838652) Burkholderia phytofirmans PsJN 6278143 YP_001890221.1 CDS Bphyt_6548 NC_010676.1 2839656 2840243 R KEGG: xac:XAC3182 hypothetical protein; hypothetical protein complement(2839656..2840243) Burkholderia phytofirmans PsJN 6277520 YP_001890222.1 CDS Bphyt_6549 NC_010676.1 2840438 2840794 R hypothetical protein complement(2840438..2840794) Burkholderia phytofirmans PsJN 6278845 YP_001890223.1 CDS Bphyt_6550 NC_010676.1 2841067 2841669 R PFAM: regulatory protein TetR; KEGG: bcm:Bcenmc03_6735 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2841067..2841669) Burkholderia phytofirmans PsJN 6279742 YP_001890224.1 CDS Bphyt_6554 NC_010676.1 2842947 2844182 R PFAM: integrase family protein; KEGG: bpd:BURPS668_A2389 integrase; integrase family protein complement(2842947..2844182) Burkholderia phytofirmans PsJN 6278327 YP_001890225.1 CDS Bphyt_6555 NC_010676.1 2844480 2846393 R TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: bxe:Bxe_B2548 translation elongation factor, selenocysteine-specific; selenocysteine-specific translation elongation factor complement(2844480..2846393) Burkholderia phytofirmans PsJN 6278717 YP_001890226.1 CDS Bphyt_6556 NC_010676.1 2846390 2847820 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(2846390..2847820) Burkholderia phytofirmans PsJN 6277794 YP_001890227.1 CDS Bphyt_6557 NC_010676.1 2847856 2848851 R TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: bxe:Bxe_B2550 formate dehydrogenase accessory protein; formate dehydrogenase accessory protein FdhE complement(2847856..2848851) Burkholderia phytofirmans PsJN 6277751 YP_001890228.1 CDS Bphyt_6558 NC_010676.1 2848963 2849619 R TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: bxe:Bxe_B2551 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma complement(2848963..2849619) Burkholderia phytofirmans PsJN 6278431 YP_001890229.1 CDS Bphyt_6559 NC_010676.1 2849606 2850538 R TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: bxe:Bxe_B2552 formate dehydrogenase, beta subunit; formate dehydrogenase subunit beta complement(2849606..2850538) Burkholderia phytofirmans PsJN 6278698 YP_001890230.1 CDS Bphyt_6560 NC_010676.1 2850548 2852977 R TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molydopterin dinucleotide-binding region; KEGG: bxe:Bxe_B2553 formate dehydrogenase, alpha subunit, anaerobic; formate dehydrogenase subunit alpha complement(2850548..2852977) Burkholderia phytofirmans PsJN 6279523 YP_001890231.1 CDS Bphyt_6561 NC_010676.1 2853026 2853616 R PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: bxe:Bxe_B2554 formate dehydrogenase-O, major subunit; molybdopterin oxidoreductase Fe4S4 region complement(2853026..2853616) Burkholderia phytofirmans PsJN 6278575 YP_001890232.1 CDS Bphyt_6562 NC_010676.1 2853809 2854168 D KEGG: scl:sce2693 putative beta-xylosidase; beta-xylosidase 2853809..2854168 Burkholderia phytofirmans PsJN 6278232 YP_001890233.1 CDS Bphyt_6563 NC_010676.1 2854351 2855427 D catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 2854351..2855427 Burkholderia phytofirmans PsJN 6279946 YP_001890234.1 CDS Bphyt_6564 NC_010676.1 2855519 2856586 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 2855519..2856586 Burkholderia phytofirmans PsJN 6278513 YP_001890235.1 CDS Bphyt_6565 NC_010676.1 2856612 2857667 D PFAM: permease; KEGG: bxe:Bxe_B2557 conserved hypothetical membrane protein, YraQ-like; permease 2856612..2857667 Burkholderia phytofirmans PsJN 6280475 YP_001890236.1 CDS Bphyt_6566 NC_010676.1 2857671 2857805 D KEGG: bxe:Bxe_B2558 hypothetical protein; hypothetical protein 2857671..2857805 Burkholderia phytofirmans PsJN 6278927 YP_001890237.1 CDS Bphyt_6567 NC_010676.1 2857824 2859527 R in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase complement(2857824..2859527) Burkholderia phytofirmans PsJN 6278972 YP_001890238.1 CDS Bphyt_6568 NC_010676.1 2859962 2861452 R PFAM: MlrC domain protein; Microcystin LR degradation protein MlrC-like; KEGG: bxe:Bxe_B2560 hypothetical protein; microcystin LR degradation protein MlrC-like protein complement(2859962..2861452) Burkholderia phytofirmans PsJN 6279336 YP_001890239.1 CDS Bphyt_6569 NC_010676.1 2861449 2862729 R KEGG: bxe:Bxe_B2561 amidase, hydantoinase/carbamoylase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; hydantoinase/carbamoylase family amidase complement(2861449..2862729) Burkholderia phytofirmans PsJN 6278852 YP_001890240.1 CDS Bphyt_6570 NC_010676.1 2862763 2863464 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2562 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter-like protein complement(2862763..2863464) Burkholderia phytofirmans PsJN 6278243 YP_001890241.1 CDS Bphyt_6571 NC_010676.1 2863461 2864228 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2563 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter-like protein complement(2863461..2864228) Burkholderia phytofirmans PsJN 6278411 YP_001890242.1 CDS Bphyt_6572 NC_010676.1 2864225 2865280 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2564 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(2864225..2865280) Burkholderia phytofirmans PsJN 6280510 YP_001890243.1 CDS Bphyt_6573 NC_010676.1 2865277 2866137 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2565 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(2865277..2866137) Burkholderia phytofirmans PsJN 6280018 YP_001890244.1 CDS Bphyt_6574 NC_010676.1 2866221 2867429 R KEGG: bxe:Bxe_B2566 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; branched chain amino acid family ABC transporter substrate-binding protein complement(2866221..2867429) Burkholderia phytofirmans PsJN 6280430 YP_001890245.1 CDS Bphyt_6575 NC_010676.1 2867705 2868553 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B2567 transcriptional regulator, GntR family; GntR family transcriptional regulator 2867705..2868553 Burkholderia phytofirmans PsJN 6279636 YP_001890246.1 CDS Bphyt_6576 NC_010676.1 2869221 2869685 D KEGG: bxe:Bxe_B2568 hypothetical protein; hypothetical protein 2869221..2869685 Burkholderia phytofirmans PsJN 6278714 YP_001890247.1 CDS Bphyt_6577 NC_010676.1 2869936 2871492 R PFAM: transposase IS66; KEGG: bch:Bcen2424_6840 transposase IS66; transposase IS66 complement(2869936..2871492) Burkholderia phytofirmans PsJN 6279031 YP_001890248.1 CDS Bphyt_6578 NC_010676.1 2871526 2871876 R PFAM: IS66 Orf2 family protein; KEGG: bch:Bcen2424_6839 IS66 Orf2 family protein; IS66 Orf2 family protein complement(2871526..2871876) Burkholderia phytofirmans PsJN 6280370 YP_001890249.1 CDS Bphyt_6579 NC_010676.1 2871857 2872336 R PFAM: transposase IS3/IS911 family protein; KEGG: bch:Bcen2424_6838 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(2871857..2872336) Burkholderia phytofirmans PsJN 6279000 YP_001890250.1 CDS Bphyt_6580 NC_010676.1 2872474 2872689 R KEGG: bpt:Bpet3764 hypothetical protein; hypothetical protein complement(2872474..2872689) Burkholderia phytofirmans PsJN 6278370 YP_001890251.1 CDS Bphyt_6581 NC_010676.1 2872691 2873548 R SMART: AAA ATPase; KEGG: bxe:Bxe_C0709 putative ATPase; AAA ATPase complement(2872691..2873548) Burkholderia phytofirmans PsJN 6278266 YP_001890252.1 CDS Bphyt_6582 NC_010676.1 2873545 2874981 R PFAM: Integrase catalytic region; KEGG: bpt:Bpet3758 putative transposase; integrase catalytic subunit complement(2873545..2874981) Burkholderia phytofirmans PsJN 6280399 YP_001890253.1 CDS Bphyt_6583 NC_010676.1 2875080 2875658 R KEGG: bpt:Bpet3757 hypothetical protein; hypothetical protein complement(2875080..2875658) Burkholderia phytofirmans PsJN 6280428 YP_001890254.1 CDS Bphyt_6584 NC_010676.1 2882060 2884057 D TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: bxe:Bxe_B2569 sigma 70 (RpoD); RNA polymerase sigma-70 subunit RpoD 2882060..2884057 Burkholderia phytofirmans PsJN 6277725 YP_001890255.1 CDS Bphyt_6585 NC_010676.1 2884146 2884526 R KEGG: sse:Ssed_3831 hypothetical protein; hypothetical protein complement(2884146..2884526) Burkholderia phytofirmans PsJN 6279675 YP_001890256.1 CDS Bphyt_6586 NC_010676.1 2884978 2885454 D PFAM: PRC-barrel domain protein; KEGG: bxe:Bxe_B2570 hypothetical protein; PRC-barrel domain-containing protein 2884978..2885454 Burkholderia phytofirmans PsJN 6278463 YP_001890257.1 CDS Bphyt_6587 NC_010676.1 2885800 2886141 R KEGG: gbe:GbCGDNIH1_1249 peptidase, M48 family; hypothetical protein complement(2885800..2886141) Burkholderia phytofirmans PsJN 6278342 YP_001890258.1 CDS Bphyt_6588 NC_010676.1 2886296 2887111 R KEGG: bxe:Bxe_B2571 hypothetical protein; hypothetical protein complement(2886296..2887111) Burkholderia phytofirmans PsJN 6280536 YP_001890259.1 CDS Bphyt_6589 NC_010676.1 2887134 2888024 R KEGG: rso:RSc3028 putative signal peptide protein; signal peptide protein complement(2887134..2888024) Burkholderia phytofirmans PsJN 6279129 YP_001890260.1 CDS Bphyt_6590 NC_010676.1 2888021 2889859 R KEGG: bxe:Bxe_B2572 signal peptide protein; signal peptide protein complement(2888021..2889859) Burkholderia phytofirmans PsJN 6279098 YP_001890261.1 CDS Bphyt_6591 NC_010676.1 2889876 2894666 R PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: bxe:Bxe_B2573 hypothetical protein; alpha-2-macroglobulin domain-containing protein complement(2889876..2894666) Burkholderia phytofirmans PsJN 6278282 YP_001890262.1 CDS Bphyt_6592 NC_010676.1 2894663 2895646 R PFAM: protein of unknown function DUF1175; KEGG: bxe:Bxe_B2574 hypothetical protein; hypothetical protein complement(2894663..2895646) Burkholderia phytofirmans PsJN 6278875 YP_001890263.1 CDS Bphyt_6593 NC_010676.1 2895647 2897437 R KEGG: bxe:Bxe_B2575 hypothetical protein; hypothetical protein complement(2895647..2897437) Burkholderia phytofirmans PsJN 6280155 YP_001890264.1 CDS Bphyt_6594 NC_010676.1 2897898 2899094 R PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_B2576 putative aminotransferase; GntR family transcriptional regulator complement(2897898..2899094) Burkholderia phytofirmans PsJN 6280162 YP_001890265.1 CDS Bphyt_6595 NC_010676.1 2899215 2900387 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2577 putative FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2899215..2900387) Burkholderia phytofirmans PsJN 6278092 YP_001890266.1 CDS Bphyt_6596 NC_010676.1 2900518 2902017 R PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B2578 putative aldehyde dehydrogenase family protein; aldehyde dehydrogenase complement(2900518..2902017) Burkholderia phytofirmans PsJN 6278823 YP_001890267.1 CDS Bphyt_6597 NC_010676.1 2902335 2903222 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2579 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2902335..2903222) Burkholderia phytofirmans PsJN 6280359 YP_001890268.1 CDS Bphyt_6598 NC_010676.1 2903671 2904039 D PFAM: response regulator receiver; KEGG: bxe:Bxe_B2580 response regulator receiver domain protein(CheY); response regulator receiver protein 2903671..2904039 Burkholderia phytofirmans PsJN 6277568 YP_001890269.1 CDS Bphyt_6599 NC_010676.1 2904216 2905595 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4087 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(2904216..2905595) Burkholderia phytofirmans PsJN 6277325 YP_001890270.1 CDS Bphyt_6600 NC_010676.1 2905840 2906652 R PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_B2581 putative citrate lyase beta subunit; HpcH/HpaI aldolase complement(2905840..2906652) Burkholderia phytofirmans PsJN 6278006 YP_001890271.1 CDS Bphyt_6601 NC_010676.1 2906649 2908037 R PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_B2582 putative MmgE/PRP family protein; MmgE/PrpD family protein complement(2906649..2908037) Burkholderia phytofirmans PsJN 6279748 YP_001890272.1 CDS Bphyt_6602 NC_010676.1 2908109 2909287 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_B2583 putative CaiB/BaiF family protein; L-carnitine dehydratase/bile acid-inducible protein F complement(2908109..2909287) Burkholderia phytofirmans PsJN 6280427 YP_001890273.1 CDS Bphyt_6603 NC_010676.1 2909305 2910468 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B2584 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(2909305..2910468) Burkholderia phytofirmans PsJN 6277799 YP_001890274.1 CDS Bphyt_6604 NC_010676.1 2910509 2911351 R KEGG: bxe:Bxe_B2585 hypothetical protein; hypothetical protein complement(2910509..2911351) Burkholderia phytofirmans PsJN 6277524 YP_001890275.1 CDS Bphyt_6605 NC_010676.1 2911643 2912446 D KEGG: bxe:Bxe_B2586 hypothetical protein; hypothetical protein 2911643..2912446 Burkholderia phytofirmans PsJN 6279483 YP_001890276.1 CDS Bphyt_6606 NC_010676.1 2912776 2914692 D KEGG: bxe:Bxe_B2587 hypothetical protein; hypothetical protein 2912776..2914692 Burkholderia phytofirmans PsJN 6278998 YP_001890277.1 CDS Bphyt_6608 NC_010676.1 2914960 2915745 R hypothetical protein complement(2914960..2915745) Burkholderia phytofirmans PsJN 6279009 YP_001890278.1 CDS Bphyt_6609 NC_010676.1 2915929 2917335 R hypothetical protein complement(2915929..2917335) Burkholderia phytofirmans PsJN 6280213 YP_001890279.1 CDS Bphyt_6610 NC_010676.1 2917339 2920113 R TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bam:Bamb_3479 rhs element Vgr protein; ImpA family type VI secretion-associated protein complement(2917339..2920113) Burkholderia phytofirmans PsJN 6279647 YP_001890280.1 CDS Bphyt_6611 NC_010676.1 2920980 2921720 R KEGG: bxe:Bxe_B2600 hypothetical protein; hypothetical protein complement(2920980..2921720) Burkholderia phytofirmans PsJN 6279784 YP_001890281.1 CDS Bphyt_6612 NC_010676.1 2921732 2921953 R KEGG: bxe:Bxe_B2601 hypothetical protein; hypothetical protein complement(2921732..2921953) Burkholderia phytofirmans PsJN 6278012 YP_001890282.1 CDS Bphyt_6613 NC_010676.1 2922196 2922792 D PFAM: Phosphoglycerate mutase; KEGG: bxe:Bxe_B2602 putative phosphoglycerate mutase; phosphoglycerate mutase 2922196..2922792 Burkholderia phytofirmans PsJN 6279079 YP_001890283.1 CDS Bphyt_6614 NC_010676.1 2922811 2923311 R KEGG: bxe:Bxe_B2603 hypothetical protein; hypothetical protein complement(2922811..2923311) Burkholderia phytofirmans PsJN 6278956 YP_001890284.1 CDS Bphyt_6615 NC_010676.1 2923361 2924377 R KEGG: bxe:Bxe_B2604 hypothetical protein; hypothetical protein complement(2923361..2924377) Burkholderia phytofirmans PsJN 6278088 YP_001890285.1 CDS Bphyt_6616 NC_010676.1 2924397 2925755 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2605 major facilitator superfamily (MFS)metabolite/H+ symporter; major facilitator superfamily protein complement(2924397..2925755) Burkholderia phytofirmans PsJN 6278030 YP_001890286.1 CDS Bphyt_6617 NC_010676.1 2925752 2926828 R KEGG: bxe:Bxe_B2606 hypothetical protein; hypothetical protein complement(2925752..2926828) Burkholderia phytofirmans PsJN 6280462 YP_001890287.1 CDS Bphyt_6618 NC_010676.1 2926904 2927956 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B2607 outer membrane porin, OmpC family; porin complement(2926904..2927956) Burkholderia phytofirmans PsJN 6278830 YP_001890288.1 CDS Bphyt_6619 NC_010676.1 2928167 2929069 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2608 transcriptional regulator, LysR family; LysR family transcriptional regulator 2928167..2929069 Burkholderia phytofirmans PsJN 6278201 YP_001890289.1 CDS Bphyt_6620 NC_010676.1 2929178 2930671 D KEGG: bxe:Bxe_B2609 hypothetical protein; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase; circadian clock protein KaiC 2929178..2930671 Burkholderia phytofirmans PsJN 6277754 YP_001890290.1 CDS Bphyt_6621 NC_010676.1 2930675 2932333 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2610 histidine kinase; histidine kinase 2930675..2932333 Burkholderia phytofirmans PsJN 6278772 YP_001890291.1 CDS Bphyt_6622 NC_010676.1 2932453 2932929 D PFAM: regulatory protein MarR; KEGG: bxe:Bxe_B2611 transcriptional regulator, MarR family; MarR family transcriptional regulator 2932453..2932929 Burkholderia phytofirmans PsJN 6279510 YP_001890292.1 CDS Bphyt_6623 NC_010676.1 2932936 2935038 D PFAM: Fusaric acid resistance protein conserved region; KEGG: bxe:Bxe_B2612 aromatic acid exporter, ArAE family; fusaric acid resistance protein 2932936..2935038 Burkholderia phytofirmans PsJN 6280218 YP_001890293.1 CDS Bphyt_6624 NC_010676.1 2935087 2935296 D PFAM: protein of unknown function DUF1656; KEGG: bxe:Bxe_B2613 hypothetical protein; hypothetical protein 2935087..2935296 Burkholderia phytofirmans PsJN 6280141 YP_001890294.1 CDS Bphyt_6625 NC_010676.1 2935293 2936303 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_B2614 aromatic acid efflux pump, membrane fusion protein; RND family efflux transporter MFP subunit 2935293..2936303 Burkholderia phytofirmans PsJN 6278270 YP_001890295.1 CDS Bphyt_6626 NC_010676.1 2936300 2937826 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_B2615 aromatic acid efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 2936300..2937826 Burkholderia phytofirmans PsJN 6278779 YP_001890296.1 CDS Bphyt_6627 NC_010676.1 2937945 2938037 D hypothetical protein 2937945..2938037 Burkholderia phytofirmans PsJN 6280443 YP_001890297.1 CDS Bphyt_6628 NC_010676.1 2938090 2938551 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_B2616 putative isoquinoline 1-oxidoreductase, alpha subunit; (2Fe-2S)-binding domain-containing protein complement(2938090..2938551) Burkholderia phytofirmans PsJN 6278783 YP_001890298.1 CDS Bphyt_6629 NC_010676.1 2938583 2940853 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B2617 putative isoquinoline 1-oxidoreductase, beta subunit; acylaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein complement(2938583..2940853) Burkholderia phytofirmans PsJN 6279068 YP_001890299.1 CDS Bphyt_6630 NC_010676.1 2941105 2942304 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2619 ABC D-xylose transporter, inner membrane subunit; monosaccharide-transporting ATPase complement(2941105..2942304) Burkholderia phytofirmans PsJN 6278118 YP_001890300.1 CDS Bphyt_6631 NC_010676.1 2942301 2943860 R with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit complement(2942301..2943860) Burkholderia phytofirmans PsJN 6280222 YP_001890301.1 CDS Bphyt_6632 NC_010676.1 2943940 2944968 R KEGG: bxe:Bxe_B2621 ABC xylose transporter, periplasmic ligand binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; D-xylose ABC transporter periplasmic substrate-binding protein complement(2943940..2944968) Burkholderia phytofirmans PsJN 6280322 YP_001890302.1 CDS Bphyt_6633 NC_010676.1 2945138 2946460 R catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase complement(2945138..2946460) Burkholderia phytofirmans PsJN 6279032 YP_001890303.1 CDS Bphyt_6634 NC_010676.1 2946732 2947949 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B2623 transcriptional regulator, AraC family; AraC family transcriptional regulator 2946732..2947949 Burkholderia phytofirmans PsJN 6280047 YP_001890304.1 CDS Bphyt_6635 NC_010676.1 2947983 2949068 D PFAM: Aldose 1-epimerase; KEGG: bxe:Bxe_B2624 aldose 1-epimerase; aldose 1-epimerase 2947983..2949068 Burkholderia phytofirmans PsJN 6278055 YP_001890305.1 CDS Bphyt_6636 NC_010676.1 2949239 2949541 D KEGG: bxe:Bxe_B2625 hypothetical protein; hypothetical protein 2949239..2949541 Burkholderia phytofirmans PsJN 6277812 YP_001890306.1 CDS Bphyt_6637 NC_010676.1 2949756 2949977 D KEGG: bur:Bcep18194_A6341 hypothetical protein; hypothetical protein 2949756..2949977 Burkholderia phytofirmans PsJN 6279758 YP_001890307.1 CDS Bphyt_6638 NC_010676.1 2950271 2951389 D PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B0940 ABC putrescine transporter, periplasmic ligand binding protein PotF; family 1 extracellular solute-binding protein 2950271..2951389 Burkholderia phytofirmans PsJN 6278308 YP_001890308.1 CDS Bphyt_6639 NC_010676.1 2951508 2951870 D PFAM: protein of unknown function DUF861 cupin_3; KEGG: pfl:PFL_6047 protein of unknown function (DUF861) family; hypothetical protein 2951508..2951870 Burkholderia phytofirmans PsJN 6277967 YP_001890309.1 CDS Bphyt_6640 NC_010676.1 2951980 2952882 R KEGG: scl:sce8811 transcriptional regulator, TetR family; hypothetical protein complement(2951980..2952882) Burkholderia phytofirmans PsJN 6277936 YP_001890310.1 CDS Bphyt_6641 NC_010676.1 2953010 2954089 D PFAM: Choloylglycine hydrolase; KEGG: bvi:Bcep1808_5029 choloylglycine hydrolase; Choloylglycine hydrolase 2953010..2954089 Burkholderia phytofirmans PsJN 6280066 YP_001890311.1 CDS Bphyt_6642 NC_010676.1 2954297 2954743 D KEGG: bch:Bcen2424_3744 hypothetical protein; hypothetical protein 2954297..2954743 Burkholderia phytofirmans PsJN 6279648 YP_001890312.1 CDS Bphyt_6643 NC_010676.1 2954950 2955762 D PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_02205 acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 2954950..2955762 Burkholderia phytofirmans PsJN 6277830 YP_001890313.1 CDS Bphyt_6644 NC_010676.1 2955785 2956360 R PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_1826 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2955785..2956360) Burkholderia phytofirmans PsJN 6278236 YP_001890314.1 CDS Bphyt_6645 NC_010676.1 2957012 2958763 D PFAM: chemotaxis sensory transducer; KEGG: bte:BTH_I2374 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2957012..2958763 Burkholderia phytofirmans PsJN 6279973 YP_001890315.1 CDS Bphyt_6646 NC_010676.1 2958959 2959909 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B1527 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2958959..2959909) Burkholderia phytofirmans PsJN 6277968 YP_001890316.1 CDS Bphyt_6647 NC_010676.1 2960051 2961481 D PFAM: sulfatase; KEGG: reu:Reut_B5764 sulfatase; sulfatase 2960051..2961481 Burkholderia phytofirmans PsJN 6278274 YP_001890317.1 CDS Bphyt_6648 NC_010676.1 2961534 2962835 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reu:Reut_B5767 general substrate transporter:major facilitator superfamily MFS_1; major facilitator superfamily protein 2961534..2962835 Burkholderia phytofirmans PsJN 6279844 YP_001890318.1 CDS Bphyt_6649 NC_010676.1 2962832 2964247 D PFAM: FAD linked oxidase domain protein; KEGG: rme:Rmet_1608 FAD linked oxidase-like protein; FAD linked oxidase domain-containing protein 2962832..2964247 Burkholderia phytofirmans PsJN 6280293 YP_001890319.1 CDS Bphyt_6650 NC_010676.1 2964463 2964834 R PFAM: DGPFAETKE family protein; KEGG: mpt:Mpe_A0137 hypothetical protein; DGPFAETKE family protein complement(2964463..2964834) Burkholderia phytofirmans PsJN 6278654 YP_001890320.1 CDS Bphyt_6651 NC_010676.1 2965107 2966006 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0265 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2965107..2966006) Burkholderia phytofirmans PsJN 6278161 YP_001890321.1 CDS Bphyt_6652 NC_010676.1 2966187 2967023 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0267 putative hydrolase, alpha/beta hydrolase family; alpha/beta fold family hydrolase 2966187..2967023 Burkholderia phytofirmans PsJN 6278083 YP_001890322.1 CDS Bphyt_6653 NC_010676.1 2967080 2968426 D KEGG: bxe:Bxe_B0268 putative nitrilotriacetate monooxygenase component A; nitrilotriacetate monooxygenase component A 2967080..2968426 Burkholderia phytofirmans PsJN 6277919 YP_001890323.1 CDS Bphyt_6654 NC_010676.1 2968454 2968900 D KEGG: mex:Mext_2454 alcohol dehydrogenase zinc-binding domain protein; NADPH:quinone reductase and related Zn-dependent oxidoreductase-like protein 2968454..2968900 Burkholderia phytofirmans PsJN 6278683 YP_001890324.1 CDS Bphyt_6655 NC_010676.1 2968958 2969704 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cak:Caul_5117 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2968958..2969704 Burkholderia phytofirmans PsJN 6279805 YP_001890325.1 CDS Bphyt_6656 NC_010676.1 2969791 2970540 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0264 putative short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2969791..2970540 Burkholderia phytofirmans PsJN 6278121 YP_001890326.1 CDS Bphyt_6657 NC_010676.1 2970882 2971757 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bxe:Bxe_C0822 putative phage integrase; integrase family protein 2970882..2971757 Burkholderia phytofirmans PsJN 6279392 YP_001890327.1 CDS Bphyt_6658 NC_010676.1 2971779 2972948 D PFAM: putative transposase; KEGG: bxe:Bxe_C0821 putative transposase; transposase 2971779..2972948 Burkholderia phytofirmans PsJN 6279556 YP_001890328.1 CDS Bphyt_6659 NC_010676.1 2973417 2974073 R PFAM: DSBA oxidoreductase; KEGG: atc:AGR_pAT_16 hypothetical protein; DSBA oxidoreductase complement(2973417..2974073) Burkholderia phytofirmans PsJN 6278581 YP_001890329.1 CDS Bphyt_6660 NC_010676.1 2974087 2974812 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa54380 putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2974087..2974812) Burkholderia phytofirmans PsJN 6278746 YP_001890330.1 CDS Bphyt_6661 NC_010676.1 2974905 2975300 D PFAM: helix-turn-helix HxlR type; KEGG: bxe:Bxe_A1776 putative transcriptional regulator; HxlR family transcriptional regulator 2974905..2975300 Burkholderia phytofirmans PsJN 6278312 YP_001890331.1 CDS Bphyt_6662 NC_010676.1 2975572 2976204 D PFAM: Glutathione S-transferase domain; KEGG: bur:Bcep18194_B2348 glutathione S-transferase-like; glutathione S-transferase domain 2975572..2976204 Burkholderia phytofirmans PsJN 6280490 YP_001890332.1 CDS Bphyt_6663 NC_010676.1 2976990 2978699 D PFAM: Carboxylesterase type B; KEGG: sus:Acid_2915 carboxylesterase, type B; carboxylesterase type B 2976990..2978699 Burkholderia phytofirmans PsJN 6279505 YP_001890333.1 CDS Bphyt_6664 NC_010676.1 2979118 2980182 R KEGG: reu:Reut_A3241 putative exported protein (pseudogene); hypothetical protein complement(2979118..2980182) Burkholderia phytofirmans PsJN 6278285 YP_001890334.1 CDS Bphyt_6665 NC_010676.1 2980340 2981878 R PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: sme:SMc00478 hypothetical protein; hypothetical protein complement(2980340..2981878) Burkholderia phytofirmans PsJN 6278221 YP_001890335.1 CDS Bphyt_6666 NC_010676.1 2981897 2983375 R PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: mba:Mbar_A3077 hypothetical protein; hypothetical protein complement(2981897..2983375) Burkholderia phytofirmans PsJN 6278159 YP_001890336.1 CDS Bphyt_6667 NC_010676.1 2983433 2983702 R PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bcm:Bcenmc03_4282 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS complement(2983433..2983702) Burkholderia phytofirmans PsJN 6277959 YP_001890337.1 CDS Bphyt_6668 NC_010676.1 2983798 2984772 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ppw:PputW619_2896 transcriptional regulator, AraC family; AraC family transcriptional regulator 2983798..2984772 Burkholderia phytofirmans PsJN 6277864 YP_001890338.1 CDS Bphyt_6669 NC_010676.1 2984845 2985345 R KEGG: rme:Rmet_5404 hypothetical protein; hypothetical protein complement(2984845..2985345) Burkholderia phytofirmans PsJN 6278659 YP_001890339.1 CDS Bphyt_6670 NC_010676.1 2985463 2985960 R KEGG: rme:Rmet_5406 hypothetical protein; hypothetical protein complement(2985463..2985960) Burkholderia phytofirmans PsJN 6278291 YP_001890340.1 CDS Bphyt_6671 NC_010676.1 2985964 2986740 R KEGG: reu:Reut_B4633 putative periplasmic protein; hypothetical protein complement(2985964..2986740) Burkholderia phytofirmans PsJN 6279779 YP_001890341.1 CDS Bphyt_6672 NC_010676.1 2987263 2988075 D KEGG: smd:Smed_3790 hypothetical protein; hypothetical protein 2987263..2988075 Burkholderia phytofirmans PsJN 6278466 YP_001890342.1 CDS Bphyt_6673 NC_010676.1 2988211 2988975 D KEGG: rme:Rmet_4845 hypothetical protein; hypothetical protein 2988211..2988975 Burkholderia phytofirmans PsJN 6280367 YP_001890343.1 CDS Bphyt_6674 NC_010676.1 2989046 2990065 D KEGG: vfi:VFA0490 soluble lytic murein transglycosylase; soluble lytic murein transglycosylase 2989046..2990065 Burkholderia phytofirmans PsJN 6278158 YP_001890344.1 CDS Bphyt_6675 NC_010676.1 2990222 2990440 D KEGG: reu:Reut_B5465 protein of unknown function DUF1214; hypothetical protein 2990222..2990440 Burkholderia phytofirmans PsJN 6279605 YP_001890345.1 CDS Bphyt_6676 NC_010676.1 2990595 2990729 D hypothetical protein 2990595..2990729 Burkholderia phytofirmans PsJN 6280235 YP_001890346.1 CDS Bphyt_6677 NC_010676.1 2990836 2991213 R PFAM: response regulator receiver; KEGG: sfu:Sfum_0944 response regulator receiver protein; response regulator receiver protein complement(2990836..2991213) Burkholderia phytofirmans PsJN 6278096 YP_001890347.1 CDS Bphyt_6678 NC_010676.1 2991310 2991933 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: xau:Xaut_3389 response regulator receiver protein; two component LuxR family transcriptional regulator complement(2991310..2991933) Burkholderia phytofirmans PsJN 6277972 YP_001890348.1 CDS Bphyt_6679 NC_010676.1 2991930 2993906 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: xau:Xaut_3388 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2991930..2993906) Burkholderia phytofirmans PsJN 6279810 YP_001890349.1 CDS Bphyt_6680 NC_010676.1 2994121 2994888 R KEGG: bxe:Bxe_B2086 hypothetical protein; hypothetical protein complement(2994121..2994888) Burkholderia phytofirmans PsJN 6278700 YP_001890350.1 CDS Bphyt_6681 NC_010676.1 2995296 2996981 D PFAM: sulfatase; KEGG: smd:Smed_1239 sulfatase; sulfatase 2995296..2996981 Burkholderia phytofirmans PsJN 6280298 YP_001890351.1 CDS Bphyt_6682 NC_010676.1 2997069 2998166 D KEGG: bxe:Bxe_A2133 putative nonspecific acid phosphatase, NapD-like; nonspecific acid phosphatase, NapD-like protein 2997069..2998166 Burkholderia phytofirmans PsJN 6277820 YP_001890352.1 CDS Bphyt_6683 NC_010676.1 2998256 2999542 D PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator; radical SAM protein 2998256..2999542 Burkholderia phytofirmans PsJN 6279993 YP_001890353.1 CDS Bphyt_6684 NC_010676.1 2999559 3000359 R hypothetical protein complement(2999559..3000359) Burkholderia phytofirmans PsJN 6278771 YP_001890354.1 CDS Bphyt_6685 NC_010676.1 3000359 3000769 R KEGG: bvi:Bcep1808_6372 hypothetical protein; hypothetical protein complement(3000359..3000769) Burkholderia phytofirmans PsJN 6278223 YP_001890355.1 CDS Bphyt_6688 NC_010676.1 3002904 3003719 R PFAM: Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_B0094 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 subunit complement(3002904..3003719) Burkholderia phytofirmans PsJN 6277899 YP_001890356.1 CDS Bphyt_6689 NC_010676.1 3003748 3004632 R KEGG: bmn:BMA10247_A0392 DedA family protein; DedA family protein complement(3003748..3004632) Burkholderia phytofirmans PsJN 6280291 YP_001890357.1 CDS Bphyt_6690 NC_010676.1 3004677 3005663 R PFAM: alpha/beta hydrolase fold; KEGG: sme:SMc01944 putative haloperoxidase protein; alpha/beta fold family hydrolase complement(3004677..3005663) Burkholderia phytofirmans PsJN 6280460 YP_001890358.1 CDS Bphyt_6691 NC_010676.1 3005918 3007375 R PFAM: cyclic nucleotide-binding; MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_B2387 cyclic nucleotide-regulated small mechanosensitive ion channel; cyclic nucleotide-regulated small mechanosensitive ion channel complement(3005918..3007375) Burkholderia phytofirmans PsJN 6278206 YP_001890359.1 CDS Bphyt_6692 NC_010676.1 3007473 3008681 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reh:H16_A1765 putative dehydrogenase, oxidoreductase FAD flavoprotein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3007473..3008681) Burkholderia phytofirmans PsJN 6279785 YP_001890360.1 CDS Bphyt_6693 NC_010676.1 3008905 3009627 R KEGG: spq:SPAB_03436 hypothetical protein; hypothetical protein complement(3008905..3009627) Burkholderia phytofirmans PsJN 6279660 YP_001890361.1 CDS Bphyt_6694 NC_010676.1 3009980 3011494 D PFAM: transcriptional regulator domain protein; SMART: AAA ATPase; KEGG: mlo:mlr6681 transcriptional regulator; winged helix family transcriptional regulator 3009980..3011494 Burkholderia phytofirmans PsJN 6279743 YP_001890362.1 CDS Bphyt_6695 NC_010676.1 3011559 3012446 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: smd:Smed_5829 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3011559..3012446) Burkholderia phytofirmans PsJN 6278328 YP_001890363.1 CDS Bphyt_6696 NC_010676.1 3012557 3013306 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_3841 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3012557..3013306 Burkholderia phytofirmans PsJN 6277986 YP_001890364.1 CDS Bphyt_6697 NC_010676.1 3013402 3013981 R KEGG: bam:Bamb_3837 YbhB and YbcL; phospholipid-binding protein-like protein complement(join(3013402..3013722,3013724..3013981)) Burkholderia phytofirmans PsJN 6277775 YP_001890365.1 CDS Bphyt_6698 NC_010676.1 3014085 3015017 R PFAM: beta-lactamase domain protein; KEGG: bur:Bcep18194_B2842 beta-lactamase-like; beta-lactamase domain-containing protein complement(3014085..3015017) Burkholderia phytofirmans PsJN 6278519 YP_001890366.1 CDS Bphyt_6700 NC_010676.1 3016052 3016570 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: bra:BRADO6675 conserved hypothetical protein; putative antioxydant protein; peroxidase-like protein complement(3016052..3016570) Burkholderia phytofirmans PsJN 6279503 YP_001890367.1 CDS Bphyt_6701 NC_010676.1 3016681 3017520 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:Pfl_3555 transcriptional regulator, AraC family; AraC family transcriptional regulator 3016681..3017520 Burkholderia phytofirmans PsJN 6279158 YP_001890368.1 CDS Bphyt_6702 NC_010676.1 3017872 3018405 D PFAM: GCN5-related N-acetyltransferase; KEGG: bcm:Bcenmc03_3728 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3017872..3018405 Burkholderia phytofirmans PsJN 6277892 YP_001890369.1 CDS Bphyt_6703 NC_010676.1 3018734 3019195 R KEGG: bxe:Bxe_B2631 hypothetical protein; hypothetical protein complement(3018734..3019195) Burkholderia phytofirmans PsJN 6277927 YP_001890370.1 CDS Bphyt_6704 NC_010676.1 3020001 3021515 R KEGG: bcy:Bcer98_3715 conserved hypothetical protein 698; hypothetical protein complement(3020001..3021515) Burkholderia phytofirmans PsJN 6279893 YP_001890371.1 CDS Bphyt_6705 NC_010676.1 3021807 3024239 R PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: azo:azo3595 hypothetical protein; type 11 methyltransferase complement(3021807..3024239) Burkholderia phytofirmans PsJN 6278424 YP_001890372.1 CDS Bphyt_6706 NC_010676.1 3024597 3026075 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mes:Meso_1102 hypothetical protein; type 11 methyltransferase complement(3024597..3026075) Burkholderia phytofirmans PsJN 6278124 YP_001890373.1 CDS Bphyt_6707 NC_010676.1 3026270 3026491 D hypothetical protein 3026270..3026491 Burkholderia phytofirmans PsJN 6280259 YP_001890374.1 CDS Bphyt_6708 NC_010676.1 3026643 3027815 D PFAM: acyltransferase 3; KEGG: mba:Mbar_A2593 hypothetical protein; acyltransferase 3 3026643..3027815 Burkholderia phytofirmans PsJN 6279501 YP_001890375.1 CDS Bphyt_6709 NC_010676.1 3028266 3029045 D PFAM: ABC-2 type transporter; KEGG: bam:Bamb_0744 ABC-2 type transporter; ABC transporter 3028266..3029045 Burkholderia phytofirmans PsJN 6279664 YP_001890376.1 CDS Bphyt_6710 NC_010676.1 3029045 3029809 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcm:Bcenmc03_0848 ABC transporter related; ABC transporter-like protein 3029045..3029809 Burkholderia phytofirmans PsJN 6278224 YP_001890377.1 CDS Bphyt_6711 NC_010676.1 3029845 3030588 R KEGG: azc:AZC_1521 glycosyltransferase; glycosyltransferase complement(3029845..3030588) Burkholderia phytofirmans PsJN 6280398 YP_001890378.1 CDS Bphyt_6712 NC_010676.1 3030646 3032643 R PFAM: glycosyl transferase group 1; KEGG: azc:AZC_1520 glycosyltransferase; group 1 glycosyl transferase complement(3030646..3032643) Burkholderia phytofirmans PsJN 6279861 YP_001890379.1 CDS Bphyt_6713 NC_010676.1 3033116 3034060 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: azc:AZC_1522 NAD-dependent epimerase; NAD-dependent epimerase/dehydratase complement(3033116..3034060) Burkholderia phytofirmans PsJN 6278375 YP_001890380.1 CDS Bphyt_6714 NC_010676.1 3035251 3035394 R hypothetical protein complement(3035251..3035394) Burkholderia phytofirmans PsJN 6279082 YP_001890381.1 CDS Bphyt_6715 NC_010676.1 3035567 3037027 R PFAM: amino acid permease-associated region; KEGG: mrd:Mrad2831_3677 amino acid permease-associated region; amino acid permease-associated protein complement(3035567..3037027) Burkholderia phytofirmans PsJN 6279688 YP_001890382.1 CDS Bphyt_6716 NC_010676.1 3037238 3039163 R PFAM: K potassium transporter; KEGG: nmu:Nmul_A0201 K+ potassium transporter; K potassium transporter complement(3037238..3039163) Burkholderia phytofirmans PsJN 6277981 YP_001890383.1 CDS Bphyt_6717 NC_010676.1 3039727 3040296 D PFAM: protein of unknown function DUF204; KEGG: ppg:PputGB1_2698 protein of unknown function DUF204; hypothetical protein 3039727..3040296 Burkholderia phytofirmans PsJN 6278170 YP_001890384.1 CDS Bphyt_6718 NC_010676.1 3040458 3040778 D PFAM: protein of unknown function DUF1255; KEGG: bxe:Bxe_C1372 hypothetical protein; hypothetical protein 3040458..3040778 Burkholderia phytofirmans PsJN 6277759 YP_001890385.1 CDS Bphyt_6719 NC_010676.1 3040903 3044016 R KEGG: rfr:Rfer_3250 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC/Chase sensor-containing diguanylate cyclase/phosphodiesterase complement(3040903..3044016) Burkholderia phytofirmans PsJN 6278673 YP_001890386.1 CDS Bphyt_6720 NC_010676.1 3044013 3044807 R KEGG: bxe:Bxe_A3035 hypothetical protein; hypothetical protein complement(3044013..3044807) Burkholderia phytofirmans PsJN 6277867 YP_001890387.1 CDS Bphyt_6721 NC_010676.1 3045077 3045601 D KEGG: msm:MSMEG_5105 hypothetical protein; hypothetical protein 3045077..3045601 Burkholderia phytofirmans PsJN 6279199 YP_001890388.1 CDS Bphyt_6722 NC_010676.1 3045639 3046700 D PFAM: Catalase domain protein; KEGG: bxe:Bxe_A3458 putative catalase; Catalase domain-containing protein 3045639..3046700 Burkholderia phytofirmans PsJN 6278674 YP_001890389.1 CDS Bphyt_6723 NC_010676.1 3046697 3047239 D PFAM: cytochrome B561; KEGG: bxe:Bxe_A3459 putative cytochrome b561; cytochrome B561 3046697..3047239 Burkholderia phytofirmans PsJN 6279653 YP_001890390.1 CDS Bphyt_6724 NC_010676.1 3047328 3049070 R PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc3051 hypothetical signal peptide protein; family 1 extracellular solute-binding protein complement(3047328..3049070) Burkholderia phytofirmans PsJN 6277673 YP_001890391.1 CDS Bphyt_6725 NC_010676.1 3049179 3049460 R KEGG: rso:RSc3050 probable transmembrane protein; transmembrane protein complement(3049179..3049460) Burkholderia phytofirmans PsJN 6277857 YP_001890392.1 CDS Bphyt_6726 NC_010676.1 3049460 3050269 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc3049 probable transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein complement(3049460..3050269) Burkholderia phytofirmans PsJN 6278728 YP_001890393.1 CDS Bphyt_6727 NC_010676.1 3050259 3051155 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc3048 probable sugar-phosphate transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein complement(3050259..3051155) Burkholderia phytofirmans PsJN 6279746 YP_001890394.1 CDS Bphyt_6728 NC_010676.1 3051152 3052240 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc3047 probable ATP-binding ABC transporter protein; ABC transporter-like protein complement(3051152..3052240) Burkholderia phytofirmans PsJN 6280360 YP_001890395.1 CDS Bphyt_6729 NC_010676.1 3052227 3053333 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc3046 putative sugar-phosphate ATP-binding ABC transporter protein; ABC transporter-like protein complement(3052227..3053333) Burkholderia phytofirmans PsJN 6277995 YP_001890396.1 CDS Bphyt_6730 NC_010676.1 3053694 3055592 D PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: bbr:BB3096 putative peptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein 3053694..3055592 Burkholderia phytofirmans PsJN 6277861 YP_001890397.1 CDS Bphyt_6731 NC_010676.1 3055674 3056645 R PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV3810 epoxide hydrolase; alpha/beta fold family hydrolase complement(3055674..3056645) Burkholderia phytofirmans PsJN 6280284 YP_001890398.1 CDS Bphyt_6732 NC_010676.1 3056758 3057468 R KEGG: bja:blr6665 hypothetical protein; hypothetical protein complement(3056758..3057468) Burkholderia phytofirmans PsJN 6277828 YP_001890399.1 CDS Bphyt_6733 NC_010676.1 3057680 3058702 R PFAM: lipolytic protein G-D-S-L family; KEGG: bxe:Bxe_B2743 putative lipase/esterase; G-D-S-L family lipolytic protein complement(3057680..3058702) Burkholderia phytofirmans PsJN 6278436 YP_001890400.1 CDS Bphyt_6735 NC_010676.1 3060050 3061357 D PFAM: sodium:dicarboxylate symporter; KEGG: bam:Bamb_6216 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 3060050..3061357 Burkholderia phytofirmans PsJN 6279070 YP_001890401.1 CDS Bphyt_6736 NC_010676.1 3061354 3062847 D TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: bam:Bamb_6217 aspartate racemase; aspartate racemase 3061354..3062847 Burkholderia phytofirmans PsJN 6277951 YP_001890402.1 CDS Bphyt_6737 NC_010676.1 3062822 3063406 R KEGG: bxe:Bxe_C0027 hypothetical protein; hypothetical protein complement(3062822..3063406) Burkholderia phytofirmans PsJN 6280335 YP_001890403.1 CDS Bphyt_6738 NC_010676.1 3063817 3064206 R KEGG: bxe:Bxe_B2757 hypothetical protein; hypothetical protein complement(3063817..3064206) Burkholderia phytofirmans PsJN 6279054 YP_001890404.1 CDS Bphyt_6739 NC_010676.1 3064669 3066000 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2758 putative major facilitator superfamily (MFS) oxalate/formate antiporter; major facilitator superfamily protein 3064669..3066000 Burkholderia phytofirmans PsJN 6277997 YP_001890405.1 CDS Bphyt_6740 NC_010676.1 3066064 3067806 D catalyzes the formation of formyl-CoA from oxalyl-CoA; oxalyl-CoA decarboxylase 3066064..3067806 Burkholderia phytofirmans PsJN 6280403 YP_001890406.1 CDS Bphyt_6741 NC_010676.1 3067831 3069081 D catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; formyl-coenzyme A transferase 3067831..3069081 Burkholderia phytofirmans PsJN 6278829 YP_001890407.1 CDS Bphyt_6742 NC_010676.1 3069187 3069618 D KEGG: bxe:Bxe_B2761 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein 3069187..3069618 Burkholderia phytofirmans PsJN 6280533 YP_001890408.1 CDS Bphyt_6743 NC_010676.1 3069699 3070625 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4867 transcriptional regulator, LysR family; LysR family transcriptional regulator 3069699..3070625 Burkholderia phytofirmans PsJN 6279879 YP_001890409.1 CDS Bphyt_6744 NC_010676.1 3070979 3072196 D PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: acr:Acry_3309 major facilitator superfamily MFS_1; major facilitator superfamily protein 3070979..3072196 Burkholderia phytofirmans PsJN 6278601 YP_001890410.1 CDS Bphyt_6745 NC_010676.1 3072246 3073349 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: pae:PA4202 hypothetical protein; 2-nitropropane dioxygenase 3072246..3073349 Burkholderia phytofirmans PsJN 6278146 YP_001890411.1 CDS Bphyt_6746 NC_010676.1 3073346 3074617 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4868 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein 3073346..3074617 Burkholderia phytofirmans PsJN 6280062 YP_001890412.1 CDS Bphyt_6747 NC_010676.1 3074636 3075670 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2762 ABC phosphate transporter, periplasmic ligand binding protein; phosphate ABC transporter substrate-binding protein complement(3074636..3075670) Burkholderia phytofirmans PsJN 6278635 YP_001890413.1 CDS Bphyt_6748 NC_010676.1 3076122 3077099 D PFAM: CHAD domain containing protein; KEGG: bxe:Bxe_B2764 hypothetical protein; CHAD domain-containing protein 3076122..3077099 Burkholderia phytofirmans PsJN 6280391 YP_001890414.1 CDS Bphyt_6749 NC_010676.1 3077167 3078204 R PFAM: Mg2 transporter protein CorA family protein; KEGG: bxe:Bxe_B2765 Mg2+ transporter protein, CorA-like; Mg2 transporter protein CorA family protein complement(3077167..3078204) Burkholderia phytofirmans PsJN 6279874 YP_001890415.1 CDS Bphyt_6750 NC_010676.1 3078512 3079537 D TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2766 ABC phosphate transporter, periplasmic ligand binding protein; phosphate ABC transporter substrate-binding protein 3078512..3079537 Burkholderia phytofirmans PsJN 6279122 YP_001890416.1 CDS Bphyt_6751 NC_010676.1 3079608 3082457 R KEGG: bxe:Bxe_B2767 hypothetical protein; chromosome segregation ATPase-like protein complement(3079608..3082457) Burkholderia phytofirmans PsJN 6277955 YP_001890417.1 CDS Bphyt_6752 NC_010676.1 3082809 3083465 D KEGG: bxe:Bxe_B2768 hypothetical protein; hypothetical protein 3082809..3083465 Burkholderia phytofirmans PsJN 6278648 YP_001890418.1 CDS Bphyt_6753 NC_010676.1 3083595 3084044 R KEGG: bxe:Bxe_B0150 hypothetical protein; hypothetical protein complement(3083595..3084044) Burkholderia phytofirmans PsJN 6280535 YP_001890419.1 CDS Bphyt_6754 NC_010676.1 3084592 3085224 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B2769 transcriptional regulator, XRE family; XRE family transcriptional regulator 3084592..3085224 Burkholderia phytofirmans PsJN 6280328 YP_001890420.1 CDS Bphyt_6755 NC_010676.1 3085256 3088255 R PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_B2770 putative FAD-dependent oxidoreductase; D-lactate dehydrogenase complement(3085256..3088255) Burkholderia phytofirmans PsJN 6278347 YP_001890421.1 CDS Bphyt_6756 NC_010676.1 3088295 3089332 R KEGG: bxe:Bxe_B2771 hypothetical protein; hypothetical protein complement(3088295..3089332) Burkholderia phytofirmans PsJN 6277886 YP_001890422.1 CDS Bphyt_6757 NC_010676.1 3089501 3090433 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2772 transcriptional regulator, LysR family; LysR family transcriptional regulator 3089501..3090433 Burkholderia phytofirmans PsJN 6279924 YP_001890423.1 CDS Bphyt_6758 NC_010676.1 3090460 3091593 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B2773 4-hydroxyphenylpyruvate dioxygenase (Hpd); 4-hydroxyphenylpyruvate dioxygenase complement(3090460..3091593) Burkholderia phytofirmans PsJN 6280472 YP_001890424.1 CDS Bphyt_6759 NC_010676.1 3091846 3092829 R TIGRFAM: pca operon transcription factor PcaQ; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2774 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3091846..3092829) Burkholderia phytofirmans PsJN 6279786 YP_001890425.1 CDS Bphyt_6760 NC_010676.1 3092938 3093642 D TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bxe:Bxe_B2775 protocatechuate 3,4-dioxygenase, beta subunit(PcaH); protocatechuate 3,4-dioxygenase subunit beta 3092938..3093642 Burkholderia phytofirmans PsJN 6277904 YP_001890426.1 CDS Bphyt_6761 NC_010676.1 3093646 3094233 D KEGG: bxe:Bxe_B2776 protocatechuate 3,4-dioxygenase, alpha subunit(PcaG); TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; protocatechuate 3,4-dioxygenase subunit alpha 3093646..3094233 Burkholderia phytofirmans PsJN 6279178 YP_001890427.1 CDS Bphyt_6762 NC_010676.1 3094381 3095613 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bte:BTH_I0908 D-alanyl-D-alanine carboxypeptidase family protein; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 complement(3094381..3095613) Burkholderia phytofirmans PsJN 6279721 YP_001890428.1 CDS Bphyt_6763 NC_010676.1 3095768 3096031 R KEGG: bxe:Bxe_B2777 hypothetical protein; hypothetical protein complement(3095768..3096031) Burkholderia phytofirmans PsJN 6280393 YP_001890429.1 CDS Bphyt_6764 NC_010676.1 3096497 3097132 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B2779 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA 3096497..3097132 Burkholderia phytofirmans PsJN 6278079 YP_001890430.1 CDS Bphyt_6765 NC_010676.1 3097440 3097643 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_B2780 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 3097440..3097643 Burkholderia phytofirmans PsJN 6278306 YP_001890431.1 CDS Bphyt_6766 NC_010676.1 3097933 3098157 D KEGG: bxe:Bxe_B2781 hypothetical protein; hypothetical protein 3097933..3098157 Burkholderia phytofirmans PsJN 6278334 YP_001890432.1 CDS Bphyt_6767 NC_010676.1 3098280 3099911 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(3098280..3099911) Burkholderia phytofirmans PsJN 6278768 YP_001890433.1 CDS Bphyt_6768 NC_010676.1 3100066 3100812 D PFAM: cyclic nucleotide-binding; KEGG: bxe:Bxe_B2783 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein 3100066..3100812 Burkholderia phytofirmans PsJN 6279545 YP_001890434.1 CDS Bphyt_6769 NC_010676.1 3100994 3102553 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bxe:Bxe_B2784 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3100994..3102553 Burkholderia phytofirmans PsJN 6277926 YP_001890435.1 CDS Bphyt_6770 NC_010676.1 3102674 3103027 R KEGG: bxe:Bxe_B2785 putative transposase; transposase complement(3102674..3103027) Burkholderia phytofirmans PsJN 6277783 YP_001890436.1 CDS Bphyt_6771 NC_010676.1 3103301 3104440 D PFAM: porin Gram-negative type; KEGG: bte:BTH_I0260 porin; porin 3103301..3104440 Burkholderia phytofirmans PsJN 6277697 YP_001890437.1 CDS Bphyt_6772 NC_010676.1 3104579 3105712 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B2786 outer membrane porin, OmpC family; porin complement(3104579..3105712) Burkholderia phytofirmans PsJN 6280207 YP_001890438.1 CDS Bphyt_6773 NC_010676.1 3106661 3106852 R KEGG: bxe:Bxe_C0209 hypothetical protein; hypothetical protein complement(3106661..3106852) Burkholderia phytofirmans PsJN 6280194 YP_001890439.1 CDS Bphyt_6774 NC_010676.1 3107904 3109949 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(3107904..3109949) Burkholderia phytofirmans PsJN 6277947 YP_001890440.1 CDS dnaG NC_010676.1 3110401 3112272 R synthesizes RNA primers at the replication forks; DNA primase complement(3110401..3112272) Burkholderia phytofirmans PsJN 6279090 YP_001890441.1 CDS Bphyt_6776 NC_010676.1 3112352 3112798 R KEGG: bxe:Bxe_B2822 hypothetical protein; hypothetical protein complement(3112352..3112798) Burkholderia phytofirmans PsJN 6277513 YP_001890442.1 CDS rpsU NC_010676.1 3113033 3113245 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(3113033..3113245) Burkholderia phytofirmans PsJN 6280513 YP_001890443.1 CDS Bphyt_6778 NC_010676.1 3113314 3114486 R PFAM: HI0933 family protein; KEGG: bxe:Bxe_B2824 HI0933-like protein; hypothetical protein complement(3113314..3114486) Burkholderia phytofirmans PsJN 6277748 YP_001890444.1 CDS Bphyt_6779 NC_010676.1 3114530 3115681 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 3114530..3115681 Burkholderia phytofirmans PsJN 6278881 YP_001890445.1 CDS Bphyt_6780 NC_010676.1 3115760 3116566 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase complement(3115760..3116566) Burkholderia phytofirmans PsJN 6279775 YP_001890446.1 CDS Bphyt_6781 NC_010676.1 3116821 3118782 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(3116821..3118782) Burkholderia phytofirmans PsJN 6279294 YP_001890447.1 CDS Bphyt_6782 NC_010676.1 3118814 3119695 R PFAM: Polyprenyl synthetase; KEGG: bxe:Bxe_B2828 geranyltranstransferase; polyprenyl synthetase complement(3118814..3119695) Burkholderia phytofirmans PsJN 6278559 YP_001890448.1 CDS Bphyt_6783 NC_010676.1 3119692 3120000 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(3119692..3120000) Burkholderia phytofirmans PsJN 6279143 YP_001890449.1 CDS Bphyt_6784 NC_010676.1 3120287 3121393 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B2830 putative osmotic adaptation-related protein; Rieske (2Fe-2S) domain-containing protein 3120287..3121393 Burkholderia phytofirmans PsJN 6277985 YP_001890450.1 CDS Bphyt_6785 NC_010676.1 3121613 3122482 D PFAM: Rhodanese domain protein; KEGG: bxe:Bxe_B2831 3-mercaptopyruvate sulfurtransferase; rhodanese domain-containing protein 3121613..3122482 Burkholderia phytofirmans PsJN 6278919 YP_001890451.1 CDS Bphyt_6786 NC_010676.1 3122592 3123476 R PFAM: dienelactone hydrolase; KEGG: bxe:Bxe_B2832 dienelactone hydrolase; carboxymethylenebutenolidase complement(3122592..3123476) Burkholderia phytofirmans PsJN 6278095 YP_001890452.1 CDS Bphyt_6787 NC_010676.1 3123570 3124919 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B2833 putative NADH dehydrogenase; NADH dehydrogenase complement(3123570..3124919) Burkholderia phytofirmans PsJN 6278252 YP_001890453.1 CDS Bphyt_6788 NC_010676.1 3125085 3127826 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(3125085..3127826) Burkholderia phytofirmans PsJN 6278249 YP_001890454.1 CDS Bphyt_6789 NC_010676.1 3127915 3128571 D PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_B2835 conserved hypothetical protein 730; hypothetical protein 3127915..3128571 Burkholderia phytofirmans PsJN 6280031 YP_001890455.1 CDS Bphyt_6790 NC_010676.1 3128632 3129549 R Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(3128632..3129549) Burkholderia phytofirmans PsJN 6279793 YP_001890456.1 CDS Bphyt_6791 NC_010676.1 3129647 3130216 D PFAM: Chromate transporter; KEGG: bxe:Bxe_B2836 chromate transporter; chromate transporter 3129647..3130216 Burkholderia phytofirmans PsJN 6277912 YP_001890457.1 CDS Bphyt_6792 NC_010676.1 3130213 3130743 D PFAM: Chromate transporter; KEGG: bxe:Bxe_B2837 chromate transporter; chromate transporter 3130213..3130743 Burkholderia phytofirmans PsJN 6280395 YP_001890458.1 CDS Bphyt_6793 NC_010676.1 3130802 3132328 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(3130802..3132328) Burkholderia phytofirmans PsJN 6278145 YP_001890459.1 CDS Bphyt_6794 NC_010676.1 3132528 3132923 D KEGG: bxe:Bxe_B2839 hypothetical protein; hypothetical protein 3132528..3132923 Burkholderia phytofirmans PsJN 6278831 YP_001890460.1 CDS Bphyt_6795 NC_010676.1 3133147 3134142 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 3133147..3134142 Burkholderia phytofirmans PsJN 6280206 YP_001890461.1 CDS Bphyt_6796 NC_010676.1 3134133 3134939 D KEGG: bxe:Bxe_B2841 putative transmembrane protein; transmembrane protein 3134133..3134939 Burkholderia phytofirmans PsJN 6278657 YP_001890462.1 CDS Bphyt_6797 NC_010676.1 3135112 3135564 D PFAM: regulatory protein MarR; Penicillinase repressor; KEGG: bxe:Bxe_B2842 transcriptional regulator, MarR family; MarR family transcriptional regulator 3135112..3135564 Burkholderia phytofirmans PsJN 6277826 YP_001890463.1 CDS Bphyt_6798 NC_010676.1 3135739 3136158 D PFAM: OsmC family protein; KEGG: bxe:Bxe_B2843 organic hydroperoxide resistance protein; OsmC family protein 3135739..3136158 Burkholderia phytofirmans PsJN 6278182 YP_001890464.1 CDS Bphyt_6799 NC_010676.1 3136346 3137845 D PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: bxe:Bxe_B2844 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase 3136346..3137845 Burkholderia phytofirmans PsJN 6279864 YP_001890465.1 CDS Bphyt_6800 NC_010676.1 3137899 3138357 D PFAM: TspO/MBR family protein; KEGG: sat:SYN_00101 CrtK protein; TspO and MBR-like protein 3137899..3138357 Burkholderia phytofirmans PsJN 6279537 YP_001890466.1 CDS Bphyt_6801 NC_010676.1 3138443 3138619 R KEGG: bxe:Bxe_B2845 hypothetical protein; hypothetical protein complement(3138443..3138619) Burkholderia phytofirmans PsJN 6279238 YP_001890467.1 CDS Bphyt_6802 NC_010676.1 3138728 3139924 R TIGRFAM: esterase, PHB depolymerase family; KEGG: bxe:Bxe_B2846 esterase, PHB depolymerase; esterase, PHB depolymerase family complement(3138728..3139924) Burkholderia phytofirmans PsJN 6278478 YP_001890468.1 CDS Bphyt_6803 NC_010676.1 3140363 3141064 D PFAM: phosphoesterase PA-phosphatase related; KEGG: bxe:Bxe_B2847 putative phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 3140363..3141064 Burkholderia phytofirmans PsJN 6278751 YP_001890469.1 CDS Bphyt_6804 NC_010676.1 3141200 3141973 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2848 ABC molybdate transporter, periplasmic ligand binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 3141200..3141973 Burkholderia phytofirmans PsJN 6279792 YP_001890470.1 CDS Bphyt_6805 NC_010676.1 3141997 3142671 D TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2849 ABC molybdate transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit 3141997..3142671 Burkholderia phytofirmans PsJN 6280339 YP_001890471.1 CDS Bphyt_6806 NC_010676.1 3142673 3143374 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2850 ABC molybdate transporter, ATPase subunit; ABC transporter-like protein 3142673..3143374 Burkholderia phytofirmans PsJN 6279951 YP_001890472.1 CDS Bphyt_6807 NC_010676.1 3143401 3144237 R PFAM: regulatory protein LysR; TOBE domain protein; KEGG: bxe:Bxe_B2851 transcriptional regulator, ModE family; ModE family transcriptional regulator complement(3143401..3144237) Burkholderia phytofirmans PsJN 6278491 YP_001890473.1 CDS Bphyt_6808 NC_010676.1 3144440 3145234 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B2852 putative short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 3144440..3145234 Burkholderia phytofirmans PsJN 6280009 YP_001890474.1 CDS Bphyt_6809 NC_010676.1 3145291 3146370 R KEGG: bmu:Bmul_5977 porin gram-negative type; porin complement(3145291..3146370) Burkholderia phytofirmans PsJN 6278200 YP_001890475.1 CDS Bphyt_6811 NC_010676.1 3148435 3149178 R KEGG: aci:ACIAD1426 salicylate esterase; salicylate esterase complement(3148435..3149178) Burkholderia phytofirmans PsJN 6278275 YP_001890476.1 CDS Bphyt_6812 NC_010676.1 3149570 3150535 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7648 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3149570..3150535) Burkholderia phytofirmans PsJN 6279295 YP_001890477.1 CDS Bphyt_6813 NC_010676.1 3150861 3151433 R KEGG: bxe:Bxe_B2855 hypothetical protein; hypothetical protein complement(3150861..3151433) Burkholderia phytofirmans PsJN 6279982 YP_001890478.1 CDS Bphyt_6814 NC_010676.1 3151546 3151983 D KEGG: bxe:Bxe_B2856 hypothetical protein; hypothetical protein 3151546..3151983 Burkholderia phytofirmans PsJN 6280170 YP_001890479.1 CDS Bphyt_6815 NC_010676.1 3151980 3152681 D PFAM: RES domain protein; KEGG: bxe:Bxe_B2857 hypothetical protein; RES domain-containing protein 3151980..3152681 Burkholderia phytofirmans PsJN 6279511 YP_001890480.1 CDS Bphyt_6816 NC_010676.1 3152785 3153543 R PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B2858 putative serine/threonine protein phosphatase; metallophosphoesterase complement(3152785..3153543) Burkholderia phytofirmans PsJN 6278036 YP_001890481.1 CDS Bphyt_6817 NC_010676.1 3153667 3155091 R PFAM: cytochrome c class I; KEGG: spe:Spro_2085 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase complement(3153667..3155091) Burkholderia phytofirmans PsJN 6278474 YP_001890482.1 CDS Bphyt_6818 NC_010676.1 3155111 3156712 R PFAM: glucose-methanol-choline oxidoreductase; KEGG: yen:YE1085 hypothetical protein; glucose-methanol-choline oxidoreductase complement(3155111..3156712) Burkholderia phytofirmans PsJN 6278160 YP_001890483.1 CDS Bphyt_6819 NC_010676.1 3156822 3157415 R KEGG: bvi:Bcep1808_5085 hypothetical protein; hypothetical protein complement(3156822..3157415) Burkholderia phytofirmans PsJN 6279428 YP_001890484.1 CDS Bphyt_6820 NC_010676.1 3157776 3158438 D PFAM: protein of unknown function DUF1345; KEGG: bxe:Bxe_B2860 hypothetical protein; hypothetical protein 3157776..3158438 Burkholderia phytofirmans PsJN 6280127 YP_001890485.1 CDS Bphyt_6821 NC_010676.1 3158904 3162359 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bxe:Bxe_B2861 putative alpha-amylase-related protein; alpha amylase catalytic protein 3158904..3162359 Burkholderia phytofirmans PsJN 6278027 YP_001890486.1 CDS Bphyt_6822 NC_010676.1 3162356 3165820 D KEGG: bxe:Bxe_B2862 putative trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose synthase 3162356..3165820 Burkholderia phytofirmans PsJN 6277876 YP_001890487.1 CDS Bphyt_6823 NC_010676.1 3165813 3168023 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 3165813..3168023 Burkholderia phytofirmans PsJN 6277901 YP_001890488.1 CDS Bphyt_6824 NC_010676.1 3168134 3170353 D KEGG: bxe:Bxe_B2864 putative glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 3168134..3170353 Burkholderia phytofirmans PsJN 6278081 YP_001890489.1 CDS Bphyt_6825 NC_010676.1 3170494 3172416 D KEGG: bxe:Bxe_B2865 putative trehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 3170494..3172416 Burkholderia phytofirmans PsJN 6277922 YP_001890490.1 CDS Bphyt_6826 NC_010676.1 3172413 3174623 D KEGG: bxe:Bxe_B2866 glycoside hydrolase, family 77; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase 3172413..3174623 Burkholderia phytofirmans PsJN 6279867 YP_001890491.1 CDS Bphyt_6827 NC_010676.1 3174620 3177475 D KEGG: bxe:Bxe_B2867 putative glycosyl hydrolase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose synthase 3174620..3177475 Burkholderia phytofirmans PsJN 6280299 YP_001890492.1 CDS Bphyt_6829 NC_010676.1 3177848 3178570 R PFAM: protein of unknown function DUF81; KEGG: bxe:Bxe_B2868 hypothetical protein; hypothetical protein complement(3177848..3178570) Burkholderia phytofirmans PsJN 6277958 YP_001890493.1 CDS Bphyt_6830 NC_010676.1 3178630 3179973 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: bxe:Bxe_B2869 putative CorC/HlyC Co++/Mg++ transporter; hypothetical protein complement(3178630..3179973) Burkholderia phytofirmans PsJN 6278616 YP_001890494.1 CDS Bphyt_6831 NC_010676.1 3180067 3180888 R PFAM: histidine kinase A domain protein; KEGG: bxe:Bxe_B2870 histidine kinase; histidine kinase complement(3180067..3180888) Burkholderia phytofirmans PsJN 6278922 YP_001890495.1 CDS Bphyt_6832 NC_010676.1 3181075 3181416 D PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bxe:Bxe_B2871 peptidylprolyl isomerase; FKBP-type peptidylprolyl isomerase 3181075..3181416 Burkholderia phytofirmans PsJN 6278743 YP_001890496.1 CDS Bphyt_6833 NC_010676.1 3181449 3182228 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B2872 transcriptional regulator, AraC family; AraC family transcriptional regulator 3181449..3182228 Burkholderia phytofirmans PsJN 6280308 YP_001890497.1 CDS Bphyt_6834 NC_010676.1 3182367 3183557 R catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase complement(3182367..3183557) Burkholderia phytofirmans PsJN 6278123 YP_001890498.1 CDS Bphyt_6835 NC_010676.1 3183869 3185419 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(3183869..3185419) Burkholderia phytofirmans PsJN 6280094 YP_001890499.1 CDS Bphyt_6836 NC_010676.1 3185583 3186077 R PFAM: Colicin V production protein; KEGG: bxe:Bxe_B2875 putative bacteriocin production related protein; colicin V production protein complement(3185583..3186077) Burkholderia phytofirmans PsJN 6277870 YP_001890500.1 CDS Bphyt_6837 NC_010676.1 3186085 3187008 R PFAM: Sporulation domain protein; KEGG: bxe:Bxe_B2876 hypothetical protein; sporulation domain-containing protein complement(3186085..3187008) Burkholderia phytofirmans PsJN 6279367 YP_001890501.1 CDS Bphyt_6838 NC_010676.1 3187038 3188348 R TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: bxe:Bxe_B2877 folylpolyglutamate synthetase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(3187038..3188348) Burkholderia phytofirmans PsJN 6277944 YP_001890502.1 CDS Bphyt_6839 NC_010676.1 3188745 3189617 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(3188745..3189617) Burkholderia phytofirmans PsJN 6280002 YP_001890503.1 CDS trpA NC_010676.1 3189698 3190510 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(3189698..3190510) Burkholderia phytofirmans PsJN 6279581 YP_001890504.1 CDS Bphyt_6841 NC_010676.1 3190561 3191466 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bxe:Bxe_B2880 putative modification methylase; DNA methylase N-4/N-6 domain-containing protein complement(3190561..3191466) Burkholderia phytofirmans PsJN 6280077 YP_001890505.1 CDS Bphyt_6842 NC_010676.1 3191478 3192671 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(3191478..3192671) Burkholderia phytofirmans PsJN 6277911 YP_001890506.1 CDS Bphyt_6843 NC_010676.1 3192732 3193445 R catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase complement(3192732..3193445) Burkholderia phytofirmans PsJN 6279042 YP_001890507.1 CDS truA NC_010676.1 3193442 3194254 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(3193442..3194254) Burkholderia phytofirmans PsJN 6279694 YP_001890508.1 CDS Bphyt_6845 NC_010676.1 3194251 3196923 R KEGG: bxe:Bxe_B2884 hypothetical protein; hypothetical protein complement(3194251..3196923) Burkholderia phytofirmans PsJN 6279551 YP_001890509.1 CDS Bphyt_6846 NC_010676.1 3197063 3198184 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(3197063..3198184) Burkholderia phytofirmans PsJN 6279840 YP_001890510.1 CDS Bphyt_6847 NC_010676.1 3198523 3199590 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(3198523..3199590) Burkholderia phytofirmans PsJN 6280349 YP_001890511.1 CDS leuD NC_010676.1 3199744 3200397 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(3199744..3200397) Burkholderia phytofirmans PsJN 6279402 YP_001890512.1 CDS Bphyt_6849 NC_010676.1 3200485 3200643 R PFAM: Entericidin EcnAB; KEGG: bpd:BURPS668_A2453 hypothetical protein; entericidin EcnAB complement(3200485..3200643) Burkholderia phytofirmans PsJN 6279586 YP_001890513.1 CDS Bphyt_6850 NC_010676.1 3200650 3202059 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(3200650..3202059) Burkholderia phytofirmans PsJN 6277897 YP_001890514.1 CDS gltA NC_010676.1 3202393 3203694 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(3202393..3203694) Burkholderia phytofirmans PsJN 6278578 YP_001890515.1 CDS Bphyt_6852 NC_010676.1 3203786 3204058 R PFAM: protein of unknown function DUF339; KEGG: bxe:Bxe_B2891 hypothetical protein; hypothetical protein complement(3203786..3204058) Burkholderia phytofirmans PsJN 6279544 YP_001890516.1 CDS sdhB NC_010676.1 3204060 3204764 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(3204060..3204764) Burkholderia phytofirmans PsJN 6280001 YP_001890517.1 CDS sdhA NC_010676.1 3204789 3206564 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(3204789..3206564) Burkholderia phytofirmans PsJN 6278435 YP_001890518.1 CDS Bphyt_6855 NC_010676.1 3206569 3206937 R TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bte:BTH_II0661 succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase, hydrophobic membrane anchor protein complement(3206569..3206937) Burkholderia phytofirmans PsJN 6277942 YP_001890519.1 CDS Bphyt_6856 NC_010676.1 3206941 3207357 R TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: bxe:Bxe_B2895 putative succinate dehydrogenase cytochromeb-556 subunit; succinate dehydrogenase, cytochrome b556 subunit complement(3206941..3207357) Burkholderia phytofirmans PsJN 6277975 YP_001890520.1 CDS Bphyt_6857 NC_010676.1 3207515 3208315 R PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_B2896 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(3207515..3208315) Burkholderia phytofirmans PsJN 6277671 YP_001890521.1 CDS Bphyt_6858 NC_010676.1 3208808 3209791 D catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 3208808..3209791 Burkholderia phytofirmans PsJN 6278618 YP_001890522.1 CDS Bphyt_6859 NC_010676.1 3210039 3211055 D PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_B2899 lyase; HpcH/HpaI aldolase 3210039..3211055 Burkholderia phytofirmans PsJN 6280375 YP_001890523.1 CDS Bphyt_6860 NC_010676.1 3211216 3212403 D catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 3211216..3212403 Burkholderia phytofirmans PsJN 6279351 YP_001890524.1 CDS Bphyt_6861 NC_010676.1 3212505 3213011 D KEGG: bxe:Bxe_B2901 hypothetical protein; hypothetical protein 3212505..3213011 Burkholderia phytofirmans PsJN 6280114 YP_001890525.1 CDS prpD NC_010676.1 3213036 3214487 D functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 3213036..3214487 Burkholderia phytofirmans PsJN 6278765 YP_001890526.1 CDS acnA NC_010676.1 3214527 3217244 D catalyzes the conversion of citrate to isocitrate; aconitate hydratase 3214527..3217244 Burkholderia phytofirmans PsJN 6277681 YP_001890527.1 CDS Bphyt_6864 NC_010676.1 3217355 3218434 R KEGG: bxe:Bxe_B2904 hypothetical protein; hypothetical protein complement(3217355..3218434) Burkholderia phytofirmans PsJN 6278634 YP_001890528.1 CDS Bphyt_6865 NC_010676.1 3218431 3218847 R KEGG: bxe:Bxe_B2905 Hpt domain protein; Hpt domain-containing protein complement(3218431..3218847) Burkholderia phytofirmans PsJN 6280050 YP_001890529.1 CDS Bphyt_6866 NC_010676.1 3219035 3219643 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_B2906 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(3219035..3219643) Burkholderia phytofirmans PsJN 6279466 YP_001890530.1 CDS Bphyt_6867 NC_010676.1 3220079 3221194 R PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_B2907 outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein complement(3220079..3221194) Burkholderia phytofirmans PsJN 6280414 YP_001890531.1 CDS Bphyt_6868 NC_010676.1 3221291 3229789 R PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bxe:Bxe_B2908 putative haemagglutinin; hemagluttinin domain-containing protein complement(3221291..3229789) Burkholderia phytofirmans PsJN 6280051 YP_001890532.1 CDS Bphyt_6869 NC_010676.1 3230402 3230683 D KEGG: bxe:Bxe_B2914 hypothetical protein; hypothetical protein 3230402..3230683 Burkholderia phytofirmans PsJN 6277954 YP_001890533.1 CDS Bphyt_6870 NC_010676.1 3230709 3232235 D KEGG: bxe:Bxe_B2915 hypothetical protein; hypothetical protein 3230709..3232235 Burkholderia phytofirmans PsJN 6279873 YP_001890534.1 CDS Bphyt_6871 NC_010676.1 3232235 3233119 D KEGG: bxe:Bxe_B2916 hypothetical protein; hypothetical protein 3232235..3233119 Burkholderia phytofirmans PsJN 6278069 YP_001890535.1 CDS Bphyt_6872 NC_010676.1 3233116 3233835 D KEGG: bxe:Bxe_B2917 hypothetical protein; hypothetical protein 3233116..3233835 Burkholderia phytofirmans PsJN 6279439 YP_001890536.1 CDS Bphyt_6873 NC_010676.1 3233837 3234049 D KEGG: bxe:Bxe_B2918 hypothetical protein; hypothetical protein 3233837..3234049 Burkholderia phytofirmans PsJN 6279133 YP_001890537.1 CDS Bphyt_6874 NC_010676.1 3234070 3235170 D TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: bxe:Bxe_B2919 putative Flp pilus assembly CpaB; Flp pilus assembly protein CpaB 3234070..3235170 Burkholderia phytofirmans PsJN 6277758 YP_001890538.1 CDS Bphyt_6875 NC_010676.1 3235195 3236880 D PFAM: type II and III secretion system protein; KEGG: bxe:Bxe_B2920 putative type II and III secretion system outermembrane protein, secretin; type II and III secretion system protein 3235195..3236880 Burkholderia phytofirmans PsJN 6277983 YP_001890539.1 CDS Bphyt_6876 NC_010676.1 3236902 3238806 D PFAM: Forkhead-associated protein; type II secretion system protein E; KEGG: bxe:Bxe_B2921 type II/IV secretion system protein E; FHA domain-containing protein 3236902..3238806 Burkholderia phytofirmans PsJN 6279963 YP_001890540.1 CDS Bphyt_6877 NC_010676.1 3238817 3239665 D PFAM: type II secretion system protein; KEGG: bxe:Bxe_B2922 putative type II secretion system protein F; type II secretion system protein 3238817..3239665 Burkholderia phytofirmans PsJN 6279557 YP_001890541.1 CDS Bphyt_6878 NC_010676.1 3239669 3240550 D PFAM: type II secretion system protein; KEGG: bxe:Bxe_B2923 putative type II secretion system protein F; type II secretion system protein 3239669..3240550 Burkholderia phytofirmans PsJN 6279120 YP_001890542.1 CDS Bphyt_6879 NC_010676.1 3240547 3240897 D PFAM: protein of unknown function DUF192; KEGG: bxe:Bxe_B2924 hypothetical protein; hypothetical protein 3240547..3240897 Burkholderia phytofirmans PsJN 6280364 YP_001890543.1 CDS Bphyt_6880 NC_010676.1 3240894 3241730 D PFAM: TadE family protein; KEGG: bxe:Bxe_B2925 hypothetical protein; TadE family protein 3240894..3241730 Burkholderia phytofirmans PsJN 6278512 YP_001890544.1 CDS Bphyt_6881 NC_010676.1 3241730 3242545 D PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_B2926 putative transglycolase; lytic transglycosylase 3241730..3242545 Burkholderia phytofirmans PsJN 6278293 YP_001890545.1 CDS Bphyt_6882 NC_010676.1 3242582 3242968 R PFAM: Hpt domain protein; KEGG: bxe:Bxe_B2927 Hpt domain protein; Hpt protein complement(3242582..3242968) Burkholderia phytofirmans PsJN 6278311 YP_001890546.1 CDS Bphyt_6883 NC_010676.1 3242965 3243606 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_B2928 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(3242965..3243606) Burkholderia phytofirmans PsJN 6278733 YP_001890547.1 CDS Bphyt_6884 NC_010676.1 3243720 3244808 R PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_B2929 outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein complement(3243720..3244808) Burkholderia phytofirmans PsJN 6278273 YP_001890548.1 CDS Bphyt_6885 NC_010676.1 3244965 3245804 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2930 ABC spermidine/putrescine family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3244965..3245804) Burkholderia phytofirmans PsJN 6278429 YP_001890549.1 CDS Bphyt_6886 NC_010676.1 3245820 3247097 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2931 ABC spermidine/putrescine family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3245820..3247097) Burkholderia phytofirmans PsJN 6277608 YP_001890550.1 CDS Bphyt_6887 NC_010676.1 3247217 3248266 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2932 ABC spermidine/putrescine family transporter, periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(3247217..3248266) Burkholderia phytofirmans PsJN 6277977 YP_001890551.1 CDS Bphyt_6888 NC_010676.1 3248375 3249472 R KEGG: bxe:Bxe_B2933 ABC spermidine/putrescine family transporter, ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(3248375..3249472) Burkholderia phytofirmans PsJN 6279097 YP_001890552.1 CDS Bphyt_6889 NC_010676.1 3249602 3251149 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_B2934 transcriptional regulator, GntR family; GntR family transcriptional regulator 3249602..3251149 Burkholderia phytofirmans PsJN 6278163 YP_001890553.1 CDS Bphyt_6890 NC_010676.1 3251156 3254899 R PFAM: protein of unknown function DUF748; KEGG: bxe:Bxe_B2935 hypothetical protein; hypothetical protein complement(3251156..3254899) Burkholderia phytofirmans PsJN 6279258 YP_001890554.1 CDS Bphyt_6891 NC_010676.1 3255126 3256544 R PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: bxe:Bxe_B2936 putative lipoprotein; hypothetical protein complement(3255126..3256544) Burkholderia phytofirmans PsJN 6279603 YP_001890555.1 CDS Bphyt_6892 NC_010676.1 3256840 3257490 D PFAM: Negative transcriptional regulator; KEGG: bxe:Bxe_B2937 negative transcriptional regulator; FMN-binding negative transcriptional regulator 3256840..3257490 Burkholderia phytofirmans PsJN 6280026 YP_001890556.1 CDS Bphyt_6893 NC_010676.1 3257619 3260237 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: bxe:Bxe_B2938 copper-translocating P-type ATPase; heavy metal translocating P-type ATPase 3257619..3260237 Burkholderia phytofirmans PsJN 6280069 YP_001890557.1 CDS Bphyt_6894 NC_010676.1 3260451 3262424 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_B2939 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3260451..3262424 Burkholderia phytofirmans PsJN 6280187 YP_001890558.1 CDS Bphyt_6895 NC_010676.1 3262509 3263162 R PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_B2940 glutathione S-transferase; glutathione S-transferase domain complement(3262509..3263162) Burkholderia phytofirmans PsJN 6279937 YP_001890559.1 CDS Bphyt_6896 NC_010676.1 3263331 3264845 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bxe:Bxe_B2941 polyhydroxyalkanoate depolymerase; polyhydroxyalkanoate depolymerase 3263331..3264845 Burkholderia phytofirmans PsJN 6278031 YP_001890560.1 CDS Bphyt_6897 NC_010676.1 3264937 3265371 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B2942 hypothetical protein; cupin complement(3264937..3265371) Burkholderia phytofirmans PsJN 6279705 YP_001890561.1 CDS Bphyt_6898 NC_010676.1 3265547 3266158 R KEGG: bxe:Bxe_B2943 hypothetical protein; hypothetical protein complement(3265547..3266158) Burkholderia phytofirmans PsJN 6279016 YP_001890562.1 CDS Bphyt_6899 NC_010676.1 3266289 3267203 R PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_B2944 putative 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase complement(3266289..3267203) Burkholderia phytofirmans PsJN 6279740 YP_001890563.1 CDS Bphyt_6900 NC_010676.1 3267358 3267657 R KEGG: bxe:Bxe_B2945 hypothetical protein; hypothetical protein complement(3267358..3267657) Burkholderia phytofirmans PsJN 6279302 YP_001890564.1 CDS Bphyt_6901 NC_010676.1 3268102 3268260 R KEGG: bxe:Bxe_B2946 hypothetical protein; hypothetical protein complement(3268102..3268260) Burkholderia phytofirmans PsJN 6277918 YP_001890565.1 CDS Bphyt_6902 NC_010676.1 3268684 3270087 R KEGG: bxe:Bxe_B2947 hypothetical protein; hypothetical protein complement(3268684..3270087) Burkholderia phytofirmans PsJN 6278106 YP_001890566.1 CDS Bphyt_6903 NC_010676.1 3270219 3270905 R PFAM: MgtC/SapB transporter; KEGG: bxe:Bxe_B2948 MgtC/SapB family transporter; MgtC/SapB transporter complement(3270219..3270905) Burkholderia phytofirmans PsJN 6279841 YP_001890567.1 CDS Bphyt_6904 NC_010676.1 3271187 3272296 D PFAM: N-acylglucosamine 2-epimerase; KEGG: bxe:Bxe_B2949 putative isomerase; N-acylglucosamine 2-epimerase 3271187..3272296 Burkholderia phytofirmans PsJN 6278737 YP_001890568.1 CDS Bphyt_6905 NC_010676.1 3272360 3272683 D KEGG: pnu:Pnuc_1610 hypothetical protein; hypothetical protein 3272360..3272683 Burkholderia phytofirmans PsJN 6278936 YP_001890569.1 CDS Bphyt_6906 NC_010676.1 3272786 3273061 R KEGG: bxe:Bxe_B2950 hypothetical protein; hypothetical protein complement(3272786..3273061) Burkholderia phytofirmans PsJN 6278202 YP_001890570.1 CDS Bphyt_6907 NC_010676.1 3273280 3273483 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_B2951 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 3273280..3273483 Burkholderia phytofirmans PsJN 6279407 YP_001890571.1 CDS Bphyt_6908 NC_010676.1 3273596 3275218 R PFAM: ligand binding Tar domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_B2952 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3273596..3275218) Burkholderia phytofirmans PsJN 6280104 YP_001890572.1 CDS Bphyt_6909 NC_010676.1 3275488 3275922 D PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_B2953 phenylacetic acid degradation-related protein; thioesterase superfamily protein 3275488..3275922 Burkholderia phytofirmans PsJN 6277798 YP_001890573.1 CDS Bphyt_6910 NC_010676.1 3276043 3276345 D SMART: regulatory protein ArsR; KEGG: bxe:Bxe_B2954 putative transcriptional regulator, ArsR family; ArsR family transcriptional regulator 3276043..3276345 Burkholderia phytofirmans PsJN 6278016 YP_001890574.1 CDS Bphyt_6911 NC_010676.1 3276404 3277759 D PFAM: Pyridoxal-dependent decarboxylase; KEGG: bxe:Bxe_B2955 putative pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 3276404..3277759 Burkholderia phytofirmans PsJN 6280471 YP_001890575.1 CDS Bphyt_6912 NC_010676.1 3277865 3278713 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_B2956 fumarylacetoacetate hydrolase family protein; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(3277865..3278713) Burkholderia phytofirmans PsJN 6279210 YP_001890576.1 CDS Bphyt_6913 NC_010676.1 3278780 3279523 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2957 putative short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(3278780..3279523) Burkholderia phytofirmans PsJN 6278884 YP_001890577.1 CDS Bphyt_6914 NC_010676.1 3279568 3280398 R PFAM: amidohydrolase 2; KEGG: bxe:Bxe_B2958 hypothetical protein; amidohydrolase 2 complement(3279568..3280398) Burkholderia phytofirmans PsJN 6278222 YP_001890578.1 CDS Bphyt_6915 NC_010676.1 3280406 3281446 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B2959 putative aldo/keto reductase family protein; pyridoxal 4-dehydrogenase complement(3280406..3281446) Burkholderia phytofirmans PsJN 6277847 YP_001890579.1 CDS Bphyt_6916 NC_010676.1 3281552 3282871 R PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: bxe:Bxe_B2960 altronate dehydratase; altronate dehydratase complement(3281552..3282871) Burkholderia phytofirmans PsJN 6279373 YP_001890580.1 CDS Bphyt_6917 NC_010676.1 3282914 3283246 R PFAM: SAF domain protein; KEGG: bxe:Bxe_B2961 putative hydrolase; SAF domain-containing protein complement(3282914..3283246) Burkholderia phytofirmans PsJN 6278780 YP_001890581.1 CDS Bphyt_6918 NC_010676.1 3283272 3284327 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2962 ABC sugar transporter, inner membrane subunit; monosaccharide-transporting ATPase complement(3283272..3284327) Burkholderia phytofirmans PsJN 6278112 YP_001890582.1 CDS Bphyt_6919 NC_010676.1 3284317 3285849 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2963 ABC sugar transporter, ATPase subunit; ABC transporter-like protein complement(3284317..3285849) Burkholderia phytofirmans PsJN 6279961 YP_001890583.1 CDS Bphyt_6920 NC_010676.1 3285846 3286895 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_B2964 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator complement(3285846..3286895) Burkholderia phytofirmans PsJN 6279181 YP_001890584.1 CDS Bphyt_6921 NC_010676.1 3287169 3287957 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B2965 transcriptional regulator, IclR family; IclR family transcriptional regulator 3287169..3287957 Burkholderia phytofirmans PsJN 6279744 YP_001890585.1 CDS Bphyt_6922 NC_010676.1 3288089 3288634 D KEGG: bxe:Bxe_B2966 hypothetical protein; hypothetical protein 3288089..3288634 Burkholderia phytofirmans PsJN 6277557 YP_001890586.1 CDS Bphyt_6923 NC_010676.1 3288758 3291262 R PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: bxe:Bxe_B2967 putative acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(3288758..3291262) Burkholderia phytofirmans PsJN 6280116 YP_001890587.1 CDS Bphyt_6924 NC_010676.1 3291654 3292529 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2833 transcriptional regulator, LysR family; LysR family transcriptional regulator 3291654..3292529 Burkholderia phytofirmans PsJN 6280117 YP_001890588.1 CDS prfC NC_010676.1 3292636 3294237 R stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 complement(3292636..3294237) Burkholderia phytofirmans PsJN 6278696 YP_001890589.1 CDS Bphyt_6926 NC_010676.1 3294573 3295595 R PFAM: Fimbrial protein; KEGG: dac:Daci_0124 fimbrial protein; fimbrial protein complement(3294573..3295595) Burkholderia phytofirmans PsJN 6278697 YP_001890590.1 CDS Bphyt_6927 NC_010676.1 3295676 3298336 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bxe:Bxe_B2970 putative fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein complement(3295676..3298336) Burkholderia phytofirmans PsJN 6279224 YP_001890591.1 CDS Bphyt_6928 NC_010676.1 3298452 3299249 R PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: bxe:Bxe_B2971 putative fimbrial chaperone protein; Pili assembly chaperone, N-terminal complement(3298452..3299249) Burkholderia phytofirmans PsJN 6279225 YP_001890592.1 CDS Bphyt_6929 NC_010676.1 3299273 3299830 R PFAM: Fimbrial protein; KEGG: bxe:Bxe_B2972 putative fimbrial subunit; fimbrial protein complement(3299273..3299830) Burkholderia phytofirmans PsJN 6278488 YP_001890593.1 CDS Bphyt_6930 NC_010676.1 3300173 3301555 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2828 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein complement(3300173..3301555) Burkholderia phytofirmans PsJN 6278489 YP_001890594.1 CDS Bphyt_6931 NC_010676.1 3301677 3303116 R TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: bur:Bcep18194_B2827 succinic semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase complement(3301677..3303116) Burkholderia phytofirmans PsJN 6280121 YP_001890595.1 CDS Bphyt_6932 NC_010676.1 3303113 3304150 R PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B2826 aldo/keto reductase; aldo/keto reductase complement(3303113..3304150) Burkholderia phytofirmans PsJN 6280122 YP_001890596.1 CDS Bphyt_6933 NC_010676.1 3304241 3304813 R TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: bur:Bcep18194_B2825 hypothetical protein; formaldehyde-activating protein complement(3304241..3304813) Burkholderia phytofirmans PsJN 6279327 YP_001890597.1 CDS Bphyt_6934 NC_010676.1 3305380 3305670 R PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_B2975 putative H-NS-like transcription regulator; histone family protein nucleoid-structuring protein H-NS complement(3305380..3305670) Burkholderia phytofirmans PsJN 6279328 YP_001890598.1 CDS Bphyt_6935 NC_010676.1 3305805 3307004 R PFAM: beta-lactamase; KEGG: bxe:Bxe_B2976 putative beta-lactamase class C and other penicillin binding proteins; beta-lactamase complement(3305805..3307004) Burkholderia phytofirmans PsJN 6279671 YP_001890599.1 CDS Bphyt_6936 NC_010676.1 3307244 3307447 R KEGG: bxe:Bxe_B2061 hypothetical protein; hypothetical protein complement(3307244..3307447) Burkholderia phytofirmans PsJN 6279672 YP_001890600.1 CDS Bphyt_6937 NC_010676.1 3307968 3308228 R KEGG: bur:Bcep18194_B0131 hypothetical protein; hypothetical protein complement(3307968..3308228) Burkholderia phytofirmans PsJN 6277789 YP_001890601.1 CDS Bphyt_6938 NC_010676.1 3308316 3309794 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2979 sigma54 specific transcriptional regulator containing PAS, fis family; PAS modulated Fis family sigma-54 specific transcriptional regulator complement(3308316..3309794) Burkholderia phytofirmans PsJN 6277790 YP_001890602.1 CDS Bphyt_6939 NC_010676.1 3310107 3311507 D PFAM: Citrate transporter; KEGG: bxe:Bxe_B2980 membrane protein; citrate transporter 3310107..3311507 Burkholderia phytofirmans PsJN 6280377 YP_001890603.1 CDS Bphyt_6940 NC_010676.1 3311633 3312010 D PFAM: Endoribonuclease L-PSP; KEGG: bxe:Bxe_B2982 putative translation initiation inhibitor; endoribonuclease L-PSP 3311633..3312010 Burkholderia phytofirmans PsJN 6280378 YP_001890604.1 CDS Bphyt_6941 NC_010676.1 3312033 3315542 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2983 periplasmic sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase complement(3312033..3315542) Burkholderia phytofirmans PsJN 6280463 YP_001890605.1 CDS Bphyt_6942 NC_010676.1 3315850 3317550 D TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: bxe:Bxe_B2984 methyl-accepting chemotaxis sensory transducer, PAS/Pac sensor; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 3315850..3317550 Burkholderia phytofirmans PsJN 6280464 YP_001890606.1 CDS Bphyt_6943 NC_010676.1 3317968 3318576 D PFAM: DinB family protein; KEGG: mlo:mlr8307 nuclease inhibitor; DinB family protein 3317968..3318576 Burkholderia phytofirmans PsJN 6279725 YP_001890607.1 CDS Bphyt_6944 NC_010676.1 3318852 3319103 D KEGG: bxe:Bxe_B2985 hypothetical protein; hypothetical protein 3318852..3319103 Burkholderia phytofirmans PsJN 6279726 YP_001890608.1 CDS Bphyt_6945 NC_010676.1 3319442 3320434 D KEGG: bxe:Bxe_B2986 putative DedA protein; DedA protein 3319442..3320434 Burkholderia phytofirmans PsJN 6280313 YP_001890609.1 CDS Bphyt_6946 NC_010676.1 3320525 3322270 D PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B2987 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3320525..3322270 Burkholderia phytofirmans PsJN 6280314 YP_001890610.1 CDS Bphyt_6947 NC_010676.1 3322409 3322684 D KEGG: bxe:Bxe_B2988 hypothetical protein; hypothetical protein 3322409..3322684 Burkholderia phytofirmans PsJN 6279151 YP_001890611.1 CDS Bphyt_6949 NC_010676.1 3324050 3324649 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B2990 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA complement(3324050..3324649) Burkholderia phytofirmans PsJN 6278607 YP_001890612.1 CDS Bphyt_6950 NC_010676.1 3324807 3325064 R KEGG: bxe:Bxe_B2991 hypothetical protein; hypothetical protein complement(3324807..3325064) Burkholderia phytofirmans PsJN 6278608 YP_001890613.1 CDS Bphyt_6951 NC_010676.1 3325175 3327358 R PFAM: NHL repeat containing protein; KEGG: bte:BTH_II0693 hypothetical protein; NHL repeat containing protein complement(3325175..3327358) Burkholderia phytofirmans PsJN 6279865 YP_001890614.1 CDS Bphyt_6954 NC_010676.1 3328020 3328919 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bvi:Bcep1808_0767 protein of unknown function DUF6, transmembrane; hypothetical protein complement(3328020..3328919) Burkholderia phytofirmans PsJN 6280243 YP_001890615.1 CDS Bphyt_6955 NC_010676.1 3328955 3329995 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_A3921 transcriptional regulator, AraC family; AraC family transcriptional regulator 3328955..3329995 Burkholderia phytofirmans PsJN 6278100 YP_001890616.1 CDS Bphyt_6956 NC_010676.1 3330037 3333060 R PFAM: FAD linked oxidase domain protein; KEGG: bur:Bcep18194_B3025 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase complement(3330037..3333060) Burkholderia phytofirmans PsJN 6278101 YP_001890617.1 CDS Bphyt_6957 NC_010676.1 3333092 3333841 R PFAM: Hydratase/decarboxylase; KEGG: bur:Bcep18194_B3024 2-keto-4-pentenoate hydratase-like; hydratase/decarboxylase complement(3333092..3333841) Burkholderia phytofirmans PsJN 6279795 YP_001890618.1 CDS Bphyt_6958 NC_010676.1 3333885 3335168 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B3023 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein complement(3333885..3335168) Burkholderia phytofirmans PsJN 6279796 YP_001890619.1 CDS Bphyt_6959 NC_010676.1 3335349 3336569 R PFAM: aminotransferase class V; KEGG: bxe:Bxe_B3001 serine--glyoxylate transaminase; serine--glyoxylate transaminase complement(3335349..3336569) Burkholderia phytofirmans PsJN 6279708 YP_001890620.1 CDS Bphyt_6960 NC_010676.1 3336732 3337457 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B3002 transcriptional regulator, GntR family; GntR family transcriptional regulator 3336732..3337457 Burkholderia phytofirmans PsJN 6279709 YP_001890621.1 CDS Bphyt_6961 NC_010676.1 3337711 3338661 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0795 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3337711..3338661) Burkholderia phytofirmans PsJN 6278686 YP_001890622.1 CDS Bphyt_6962 NC_010676.1 3338805 3339530 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A0600 ABC His/Glu/Gln/Arg/opine family transporter, ATPase subunit; ABC transporter-like protein complement(3338805..3339530) Burkholderia phytofirmans PsJN 6278687 YP_001890623.1 CDS Bphyt_6963 NC_010676.1 3339527 3340204 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypy:YPK_3012 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(3339527..3340204) Burkholderia phytofirmans PsJN 6278623 YP_001890624.1 CDS Bphyt_6964 NC_010676.1 3340206 3340943 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0598 ABC His/Glu/Gln/Arg/opine family transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(3340206..3340943) Burkholderia phytofirmans PsJN 6278624 YP_001890625.1 CDS Bphyt_6965 NC_010676.1 3340995 3341933 R PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A0597 ABC glutamate/aspartate transporter, periplasmic ligand binding protein; family 3 extracellular solute-binding protein complement(3340995..3341933) Burkholderia phytofirmans PsJN 6279310 YP_001890626.1 CDS Bphyt_6966 NC_010676.1 3342030 3343313 R KEGG: reh:H16_B0479 hypothetical protein; hypothetical protein complement(3342030..3343313) Burkholderia phytofirmans PsJN 6279311 YP_001890627.1 CDS Bphyt_6967 NC_010676.1 3343491 3344402 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B0481 transcriptional regulator, LysR-family; LysR family transcriptional regulator 3343491..3344402 Burkholderia phytofirmans PsJN 6278899 YP_001890628.1 CDS Bphyt_6968 NC_010676.1 3344826 3346271 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_B0796 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 3344826..3346271 Burkholderia phytofirmans PsJN 6278900 YP_001890629.1 CDS Bphyt_6969 NC_010676.1 3346371 3346643 D hypothetical protein 3346371..3346643 Burkholderia phytofirmans PsJN 6280214 YP_001890630.1 CDS Bphyt_6970 NC_010676.1 3346779 3347801 D KEGG: reu:Reut_A1676 hypothetical protein; hypothetical protein 3346779..3347801 Burkholderia phytofirmans PsJN 6280215 YP_001890631.1 CDS Bphyt_6971 NC_010676.1 3347958 3348416 D hypothetical protein 3347958..3348416 Burkholderia phytofirmans PsJN 6278988 YP_001890632.1 CDS Bphyt_6972 NC_010676.1 3348459 3349061 D KEGG: bxe:Bxe_B2165 hypothetical protein; hypothetical protein 3348459..3349061 Burkholderia phytofirmans PsJN 6278989 YP_001890633.1 CDS Bphyt_6974 NC_010676.1 3349369 3350955 D TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bpm:BURPS1710b_A0975 Na+/H+ antiporter; Na+/H+ antiporter 3349369..3350955 Burkholderia phytofirmans PsJN 6280172 YP_001890634.1 CDS Bphyt_6975 NC_010676.1 3350968 3352299 R PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_1316 general substrate transporter; major facilitator superfamily protein complement(3350968..3352299) Burkholderia phytofirmans PsJN 6280220 YP_001890635.1 CDS Bphyt_6976 NC_010676.1 3352356 3353312 R PFAM: pyruvate carboxyltransferase; KEGG: pfo:Pfl_1315 pyruvate carboxyltransferase; pyruvate carboxyltransferase complement(3352356..3353312) Burkholderia phytofirmans PsJN 6280221 YP_001890636.1 CDS Bphyt_6977 NC_010676.1 3353309 3354502 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ppf:Pput_5025 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(3353309..3354502) Burkholderia phytofirmans PsJN 6280158 YP_001890637.1 CDS Bphyt_6978 NC_010676.1 3354614 3355549 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1313 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3354614..3355549) Burkholderia phytofirmans PsJN 6280159 YP_001890638.1 CDS Bphyt_6979 NC_010676.1 3355655 3356614 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B3004 transcriptional regulator, AraC family; AraC family transcriptional regulator 3355655..3356614 Burkholderia phytofirmans PsJN 6278190 YP_001890639.1 CDS Bphyt_6980 NC_010676.1 3356713 3357471 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B3005 short chain dehydrogenase; short chain dehydrogenase 3356713..3357471 Burkholderia phytofirmans PsJN 6278191 YP_001890640.1 CDS Bphyt_6981 NC_010676.1 3357550 3358296 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_B3006 two component transcriptional regulator, winged helix family; two component winged helix family transcriptional regulator complement(3357550..3358296) Burkholderia phytofirmans PsJN 6279934 YP_001890641.1 CDS Bphyt_6982 NC_010676.1 3359032 3359397 R PFAM: response regulator receiver; KEGG: bxe:Bxe_B3007 response regulator receiver domain protein(CheY); response regulator receiver protein complement(3359032..3359397) Burkholderia phytofirmans PsJN 6279935 YP_001890642.1 CDS Bphyt_6983 NC_010676.1 3359418 3360389 R KEGG: bxe:Bxe_B3008 hypothetical protein; hypothetical protein complement(3359418..3360389) Burkholderia phytofirmans PsJN 6279930 YP_001890643.1 CDS Bphyt_6984 NC_010676.1 3360427 3360969 R KEGG: bxe:Bxe_B3009 hypothetical protein; hypothetical protein complement(3360427..3360969) Burkholderia phytofirmans PsJN 6279931 YP_001890644.1 CDS Bphyt_6985 NC_010676.1 3360966 3361700 R PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_B3010 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3360966..3361700) Burkholderia phytofirmans PsJN 6278726 YP_001890645.1 CDS Bphyt_6986 NC_010676.1 3361746 3364136 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: bxe:Bxe_B3011 CheA signal transduction histidine kinases (STHK); CheA signal transduction histidine kinase complement(3361746..3364136) Burkholderia phytofirmans PsJN 6278727 YP_001890646.1 CDS Bphyt_6987 NC_010676.1 3364416 3366188 D PFAM: phospholipase D/Transphosphatidylase; KEGG: bxe:Bxe_B3012 hypothetical protein; phospholipase D/transphosphatidylase 3364416..3366188 Burkholderia phytofirmans PsJN 6277737 YP_001890647.1 CDS Bphyt_6988 NC_010676.1 3366227 3366928 R PFAM: DNA alkylation repair enzyme; KEGG: bxe:Bxe_B3013 putative DNA alkylation repair enzyme; DNA alkylation repair protein complement(3366227..3366928) Burkholderia phytofirmans PsJN 6277738 YP_001890648.1 CDS Bphyt_6989 NC_010676.1 3366925 3367332 R KEGG: bxe:Bxe_B3014 hypothetical protein; hypothetical protein complement(3366925..3367332) Burkholderia phytofirmans PsJN 6280038 YP_001890649.1 CDS Bphyt_6990 NC_010676.1 3367557 3368996 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bch:Bcen2424_5965 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein complement(3367557..3368996) Burkholderia phytofirmans PsJN 6280039 YP_001890650.1 CDS Bphyt_6991 NC_010676.1 3368993 3372187 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bvi:Bcep1808_4759 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3368993..3372187) Burkholderia phytofirmans PsJN 6279954 YP_001890651.1 CDS Bphyt_6992 NC_010676.1 3372200 3373447 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bvi:Bcep1808_4760 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(3372200..3373447) Burkholderia phytofirmans PsJN 6279955 YP_001890652.1 CDS Bphyt_6993 NC_010676.1 3373808 3374548 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bvi:Bcep1808_4761 two component transcriptional regulator, winged helix family; two component winged helix family transcriptional regulator 3373808..3374548 Burkholderia phytofirmans PsJN 6279957 YP_001890653.1 CDS Bphyt_6994 NC_010676.1 3374532 3375779 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bcm:Bcenmc03_6461 histidine kinase; integral membrane sensor signal transduction histidine kinase 3374532..3375779 Burkholderia phytofirmans PsJN 6279958 YP_001890654.1 CDS Bphyt_6995 NC_010676.1 3375853 3376038 R KEGG: ppf:Pput_3190 hypothetical protein; hypothetical protein complement(3375853..3376038) Burkholderia phytofirmans PsJN 6279669 YP_001890655.1 CDS Bphyt_6996 NC_010676.1 3376724 3376975 R KEGG: sil:SPO1864 hypothetical protein; hypothetical protein complement(3376724..3376975) Burkholderia phytofirmans PsJN 6279670 YP_001890656.1 CDS Bphyt_6997 NC_010676.1 3377318 3377593 D KEGG: bxe:Bxe_A2488 hypothetical protein; hypothetical protein 3377318..3377593 Burkholderia phytofirmans PsJN 6277776 YP_001890657.1 CDS Bphyt_6998 NC_010676.1 3377637 3377993 D KEGG: bxe:Bxe_A2874 putative signal peptide transmembrane protein; signal peptide transmembrane protein 3377637..3377993 Burkholderia phytofirmans PsJN 6277777 YP_001890658.1 CDS Bphyt_6999 NC_010676.1 3378057 3378575 R KEGG: bxe:Bxe_B3016 hypothetical protein; hypothetical protein complement(3378057..3378575) Burkholderia phytofirmans PsJN 6279914 YP_001890659.1 CDS Bphyt_7000 NC_010676.1 3378788 3379267 R PFAM: protein of unknown function DUF1348; KEGG: bxe:Bxe_B3017 hypothetical protein; hypothetical protein complement(3378788..3379267) Burkholderia phytofirmans PsJN 6279915 YP_001890660.1 CDS Bphyt_7001 NC_010676.1 3379281 3379946 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B3018 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3379281..3379946) Burkholderia phytofirmans PsJN 6280073 YP_001890661.1 CDS Bphyt_7002 NC_010676.1 3380055 3380705 D PFAM: YceI family protein; KEGG: bxe:Bxe_B3019 putative YceI like family protein; hypothetical protein 3380055..3380705 Burkholderia phytofirmans PsJN 6280074 YP_001890662.1 CDS tdh NC_010676.1 3380803 3381834 R converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase complement(3380803..3381834) Burkholderia phytofirmans PsJN 6280452 YP_001890663.1 CDS Bphyt_7004 NC_010676.1 3381848 3383047 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(3381848..3383047) Burkholderia phytofirmans PsJN 6280453 YP_001890664.1 CDS Bphyt_7005 NC_010676.1 3383197 3383835 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B3022 transcriptional regulator, XRE family; XRE family transcriptional regulator 3383197..3383835 Burkholderia phytofirmans PsJN 6280539 YP_001890665.1 CDS Bphyt_7006 NC_010676.1 3383941 3384336 D KEGG: bxe:Bxe_B3023 hypothetical protein; hypothetical protein 3383941..3384336 Burkholderia phytofirmans PsJN 6280540 YP_001890666.1 CDS Bphyt_7007 NC_010676.1 3384399 3385481 D PFAM: integrase family protein; KEGG: bxe:Bxe_B3024 putative phage integrase; integrase family protein 3384399..3385481 Burkholderia phytofirmans PsJN 6277800 YP_001890667.1 CDS Bphyt_7008 NC_010676.1 3385553 3386758 R KEGG: bxe:Bxe_B3025 hypothetical protein; hypothetical protein complement(3385553..3386758) Burkholderia phytofirmans PsJN 6277801 YP_001890668.1 CDS Bphyt_7009 NC_010676.1 3388845 3390194 D KEGG: bxe:Bxe_B3026 putative replication protein; replication protein 3388845..3390194 Burkholderia phytofirmans PsJN 6280285 YP_001890669.1 CDS Bphyt_7010 NC_010676.1 3390252 3391310 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bxe:Bxe_B3027 ParB-like partition protein; parB-like partition protein complement(3390252..3391310) Burkholderia phytofirmans PsJN 6280286 YP_001890670.1 CDS Bphyt_7011 NC_010676.1 3391336 3391998 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_B3028 putative partition protein ParA; cobyrinic acid a,c-diamide synthase complement(3391336..3391998) Burkholderia phytofirmans PsJN 6279193 YP_001890671.1 CDS Bphyt_7012 NC_010676.1 3393109 3393468 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bxe:Bxe_B3030 arsenate reductase; arsenate reductase 3393109..3393468 Burkholderia phytofirmans PsJN 6279194 YP_001890672.1 CDS Bphyt_7013 NC_010676.1 3393490 3394476 R TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B3031 ABC aliphatic sulfonates transporter, periplasmic ligand binding protein; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein complement(3393490..3394476) Burkholderia phytofirmans PsJN 6277466 YP_001890673.1 CDS Bphyt_7014 NC_010676.1 3394705 3396081 D TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: bxe:Bxe_B3032 gluconate transporter; gluconate transporter 3394705..3396081 Burkholderia phytofirmans PsJN 6277467 YP_001890674.1 CDS Bphyt_7015 NC_010676.1 3396216 3396506 D PFAM: protein of unknown function DUF1272; KEGG: bxe:Bxe_B3033 hypothetical protein; hypothetical protein 3396216..3396506 Burkholderia phytofirmans PsJN 6280063 YP_001890675.1 CDS Bphyt_7016 NC_010676.1 3396580 3396783 R KEGG: bam:Bamb_4962 hypothetical protein; hypothetical protein complement(3396580..3396783) Burkholderia phytofirmans PsJN 6280064 YP_001890676.1 CDS Bphyt_7017 NC_010676.1 3396770 3397378 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(3396770..3397378) Burkholderia phytofirmans PsJN 6278612 YP_001890677.1 CDS Bphyt_7018 NC_010676.1 3398525 3398809 D KEGG: bxe:Bxe_B0001 hypothetical protein; hypothetical protein 3398525..3398809 Burkholderia phytofirmans PsJN 6278613 YP_001890678.1 CDS Bphyt_7019 NC_010676.1 3398809 3399090 D KEGG: bxe:Bxe_B0002 hypothetical protein; hypothetical protein 3398809..3399090 Burkholderia phytofirmans PsJN 6278271 YP_001890679.1 CDS Bphyt_7020 NC_010676.1 3399265 3399471 R hypothetical protein complement(3399265..3399471) Burkholderia phytofirmans PsJN 6278272 YP_001890680.1 CDS Bphyt_7021 NC_010676.1 3399835 3400389 D PFAM: NADPH-dependent FMN reductase; KEGG: bxe:Bxe_B0004 hypothetical protein; NADPH-dependent FMN reductase 3399835..3400389 Burkholderia phytofirmans PsJN 6279797 YP_001890681.1 CDS Bphyt_7022 NC_010676.1 3400497 3401534 R KEGG: bxe:Bxe_B0005 hypothetical protein; hypothetical protein complement(3400497..3401534) Burkholderia phytofirmans PsJN 6279798 YP_001890682.1 CDS Bphyt_7023 NC_010676.1 3401761 3404052 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B0006 periplasmic sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase complement(3401761..3404052) Burkholderia phytofirmans PsJN 6277693 YP_001890683.1 CDS Bphyt_7024 NC_010676.1 3404768 3405136 D PFAM: response regulator receiver; KEGG: bxe:Bxe_B0007 response regulator receiver domain protein(CheY); response regulator receiver protein 3404768..3405136 Burkholderia phytofirmans PsJN 6277694 YP_001890684.1 CDS Bphyt_7025 NC_010676.1 3405129 3405752 D PFAM: CheC domain protein; KEGG: bxe:Bxe_B0008 CheC, inhibitor of MCP methylation; CheC, inhibitor of MCP methylation 3405129..3405752 Burkholderia phytofirmans PsJN 6279027 YP_001890685.1 CDS Bphyt_7026 NC_010676.1 3405749 3406687 D KEGG: bxe:Bxe_B0009 putative diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 3405749..3406687 Burkholderia phytofirmans PsJN 6279028 YP_001890686.1 CDS Bphyt_7027 NC_010676.1 3406965 3407813 D TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: bxe:Bxe_B0010 putative squalene/phytoene synthase; squalene synthase 3406965..3407813 Burkholderia phytofirmans PsJN 6279994 YP_001890687.1 CDS Bphyt_7028 NC_010676.1 3407818 3409086 D TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; KEGG: bxe:Bxe_B0011 hypothetical protein; squalene-associated FAD-dependent desaturase 3407818..3409086 Burkholderia phytofirmans PsJN 6279995 YP_001890688.1 CDS Bphyt_7029 NC_010676.1 3409083 3411113 D KEGG: bxe:Bxe_B0012 terpene synthase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 3409083..3411113 Burkholderia phytofirmans PsJN 6280355 YP_001890689.1 CDS Bphyt_7030 NC_010676.1 3411117 3411848 D TIGRFAM: hopanoid-associated phosphorylase; KEGG: bxe:Bxe_B0013 hypothetical protein; hypothetical protein 3411117..3411848 Burkholderia phytofirmans PsJN 6280356 YP_001890690.1 CDS Bphyt_7031 NC_010676.1 3411994 3412473 D PFAM: thioesterase superfamily protein; KEGG: pst:PSPTO_5067 4-hydroxybenzoyl-CoA thioesterase domain protein; thioesterase superfamily protein 3411994..3412473 Burkholderia phytofirmans PsJN 6279216 YP_001890691.1 CDS Bphyt_7032 NC_010676.1 3412612 3413634 R PFAM: VacJ family lipoprotein; KEGG: bxe:Bxe_B0014 putative VacJ-like lipoprotein; VacJ family lipoprotein complement(3412612..3413634) Burkholderia phytofirmans PsJN 6279217 YP_001890692.1 CDS Bphyt_7033 NC_010676.1 3413637 3416252 R TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: bxe:Bxe_B0015 hypothetical protein; hopanoid biosynthesis associated RND transporter like protein HpnN complement(3413637..3416252) Burkholderia phytofirmans PsJN 6278928 YP_001890693.1 CDS Bphyt_7034 NC_010676.1 3416466 3417071 D PFAM: toluene tolerance family protein; KEGG: bxe:Bxe_B0016 putative ABC transporter, periplasmic ligand binding protein; toluene tolerance family protein 3416466..3417071 Burkholderia phytofirmans PsJN 6278929 YP_001890694.1 CDS Bphyt_7035 NC_010676.1 3417196 3418350 R TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: bxe:Bxe_B0017 MoaA/NifB/PqqE family protein; hopanoid biosynthesis associated radical SAM protein HpnH complement(3417196..3418350) Burkholderia phytofirmans PsJN 6278039 YP_001890695.1 CDS ispH NC_010676.1 3418361 3419305 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(3418361..3419305) Burkholderia phytofirmans PsJN 6278040 YP_001890696.1 CDS Bphyt_7037 NC_010676.1 3419649 3420515 D TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: bxe:Bxe_B0019 putative squalene/phytoene synthase; squalene synthase 3419649..3420515 Burkholderia phytofirmans PsJN 6278098 YP_001890697.1 CDS Bphyt_7038 NC_010676.1 3420515 3421687 D TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_B0020 glycosyl transferase, group 2 family; hopene-associated glycosyltransferase HpnB 3420515..3421687 Burkholderia phytofirmans PsJN 6278099 YP_001890698.1 CDS Bphyt_7039 NC_010676.1 3421747 3422310 R KEGG: bur:Bcep18194_B0108 hypothetical protein; hypothetical protein complement(3421747..3422310) Burkholderia phytofirmans PsJN 6280287 YP_001890699.1 CDS Bphyt_7040 NC_010676.1 3422448 3423458 R TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; NmrA family protein; Male sterility domain; KEGG: bxe:Bxe_B0022 hypothetical protein; hopanoid-associated sugar epimerase complement(3422448..3423458) Burkholderia phytofirmans PsJN 6280288 YP_001890700.1 CDS Bphyt_7041 NC_010676.1 3423673 3423966 D catalyzes the hydrolysis of acylphosphate; acylphosphatase 3423673..3423966 Burkholderia phytofirmans PsJN 6279146 YP_001890701.1 CDS Bphyt_7042 NC_010676.1 3424085 3425065 R TIGRFAM: methyltransferase; KEGG: bxe:Bxe_B0024 hypothetical protein; methyltransferase complement(3424085..3425065) Burkholderia phytofirmans PsJN 6279147 YP_001890702.1 CDS Bphyt_7043 NC_010676.1 3425628 3426524 D TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: bxe:Bxe_B0025 RarD protein; RarD protein, DMT superfamily transporter 3425628..3426524 Burkholderia phytofirmans PsJN 6278109 YP_001890703.1 CDS Bphyt_7044 NC_010676.1 3426564 3427103 R PFAM: protein of unknown function DUF962; KEGG: bxe:Bxe_B0026 hypothetical protein; hypothetical protein complement(3426564..3427103) Burkholderia phytofirmans PsJN 6278110 YP_001890704.1 CDS Bphyt_7045 NC_010676.1 3427195 3427908 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: bxe:Bxe_B0027 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 3427195..3427908 Burkholderia phytofirmans PsJN 6278259 YP_001890705.1 CDS Bphyt_7046 NC_010676.1 3427978 3428313 R KEGG: bxe:Bxe_B0030 hypothetical protein; hypothetical protein complement(3427978..3428313) Burkholderia phytofirmans PsJN 6278260 YP_001890706.1 CDS Bphyt_7047 NC_010676.1 3428565 3428936 R KEGG: bxe:Bxe_B0031 hypothetical protein; hypothetical protein complement(3428565..3428936) Burkholderia phytofirmans PsJN 6279156 YP_001890707.1 CDS Bphyt_7048 NC_010676.1 3429270 3431009 D KEGG: bcm:Bcenmc03_0217 TPR repeat-containing protein; hypothetical protein 3429270..3431009 Burkholderia phytofirmans PsJN 6279157 YP_001890708.1 CDS Bphyt_7049 NC_010676.1 3431066 3431326 R KEGG: bxe:Bxe_B0032 hypothetical protein; hypothetical protein complement(3431066..3431326) Burkholderia phytofirmans PsJN 6279164 YP_001890709.1 CDS Bphyt_7050 NC_010676.1 3431319 3431954 R PFAM: DNA/RNA non-specific endonuclease; KEGG: pol:Bpro_5415 DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease complement(3431319..3431954) Burkholderia phytofirmans PsJN 6279165 YP_001890710.1 CDS Bphyt_7051 NC_010676.1 3432463 3432822 R KEGG: bxe:Bxe_B0168 hypothetical protein; hypothetical protein complement(3432463..3432822) Burkholderia phytofirmans PsJN 6278185 YP_001890711.1 CDS Bphyt_7052 NC_010676.1 3432983 3433669 D KEGG: gbe:GbCGDNIH1_1414 hypothetical secreted protein; hypothetical protein 3432983..3433669 Burkholderia phytofirmans PsJN 6278186 YP_001890712.1 CDS Bphyt_7053 NC_010676.1 3433742 3435445 R TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: bxe:Bxe_B0169 acid phosphatase; acid phosphatase complement(3433742..3435445) Burkholderia phytofirmans PsJN 6277383 YP_001890713.1 CDS Bphyt_7054 NC_010676.1 3435544 3435831 R KEGG: bxe:Bxe_B0170 hypothetical protein; hypothetical protein complement(3435544..3435831) Burkholderia phytofirmans PsJN 6277384 YP_001890714.1 CDS Bphyt_7055 NC_010676.1 3436110 3437084 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0171 transcriptional regulator, IclR family; IclR family transcriptional regulator 3436110..3437084 Burkholderia phytofirmans PsJN 6277740 YP_001890715.1 CDS Bphyt_7056 NC_010676.1 3437175 3438248 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B0172 outer membrane porin, OmpC family; porin complement(3437175..3438248) Burkholderia phytofirmans PsJN 6277741 YP_001890716.1 CDS Bphyt_7057 NC_010676.1 3438690 3439004 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B0173 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 3438690..3439004 Burkholderia phytofirmans PsJN 6278314 YP_001890717.1 CDS Bphyt_7058 NC_010676.1 3439006 3439317 D KEGG: bxe:Bxe_B0174 hypothetical protein; hypothetical protein 3439006..3439317 Burkholderia phytofirmans PsJN 6278315 YP_001890718.1 CDS Bphyt_7059 NC_010676.1 3439366 3440460 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B0175 iron-sulfur cluster-binding protein, Rieske family; Rieske (2Fe-2S) domain-containing protein 3439366..3440460 Burkholderia phytofirmans PsJN 6278166 YP_001890719.1 CDS Bphyt_7060 NC_010676.1 3440453 3441220 D member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase 3440453..3441220 Burkholderia phytofirmans PsJN 6278167 YP_001890720.1 CDS Bphyt_7061 NC_010676.1 3441247 3441774 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B0177 cupin domain protein; cupin 3441247..3441774 Burkholderia phytofirmans PsJN 6280012 YP_001890721.1 CDS Bphyt_7062 NC_010676.1 3441820 3442710 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B0178 hydrolase, alpha/beta fold family; alpha/beta fold family hydrolase 3441820..3442710 Burkholderia phytofirmans PsJN 6280013 YP_001890722.1 CDS Bphyt_7063 NC_010676.1 3442711 3443595 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0179 transcriptional regulator, IclR family; IclR family transcriptional regulator 3442711..3443595 Burkholderia phytofirmans PsJN 6280300 YP_001890723.1 CDS Bphyt_7064 NC_010676.1 3443595 3444392 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0180 short chain dehydrogenase; short chain dehydrogenase 3443595..3444392 Burkholderia phytofirmans PsJN 6280301 YP_001890724.1 CDS Bphyt_7065 NC_010676.1 3444385 3446043 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_B0181 hypothetical protein; hypothetical protein 3444385..3446043 Burkholderia phytofirmans PsJN 6278984 YP_001890725.1 CDS Bphyt_7066 NC_010676.1 3446036 3446866 D catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase 3446036..3446866 Burkholderia phytofirmans PsJN 6278985 YP_001890726.1 CDS Bphyt_7067 NC_010676.1 3446907 3448397 D PFAM: Aldehyde Dehydrogenase_; KEGG: bxe:Bxe_B0183 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase 3446907..3448397 Burkholderia phytofirmans PsJN 6279627 YP_001890727.1 CDS Bphyt_7068 NC_010676.1 3448424 3449389 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0184 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 3448424..3449389 Burkholderia phytofirmans PsJN 6279628 YP_001890728.1 CDS Bphyt_7069 NC_010676.1 3449382 3450647 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0185 pyridine nucleotide-disulfide oxidoreductase, class I; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3449382..3450647 Burkholderia phytofirmans PsJN 6279899 YP_001890729.1 CDS Bphyt_7070 NC_010676.1 3450673 3452076 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0186 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein 3450673..3452076 Burkholderia phytofirmans PsJN 6279900 YP_001890730.1 CDS Bphyt_7071 NC_010676.1 3452657 3456139 D KEGG: bxe:Bxe_B0188 YD repeat protein; YD repeat-containing protein 3452657..3456139 Burkholderia phytofirmans PsJN 6279591 YP_001890731.1 CDS Bphyt_7072 NC_010676.1 3456156 3456491 D hypothetical protein 3456156..3456491 Burkholderia phytofirmans PsJN 6279592 YP_001890732.1 CDS Bphyt_7073 NC_010676.1 3456675 3458384 R PFAM: heat shock protein DnaJ domain protein; KEGG: bxe:Bxe_B0191 putative DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(3456675..3458384) Burkholderia phytofirmans PsJN 6279880 YP_001890733.1 CDS Bphyt_7074 NC_010676.1 3458391 3460100 R PFAM: Heat shock protein 70; KEGG: bxe:Bxe_B0192 putative DnaK chaperone protein; 2-alkenal reductase complement(3458391..3460100) Burkholderia phytofirmans PsJN 6279881 YP_001890734.1 CDS Bphyt_7075 NC_010676.1 3460322 3460783 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0193 putative acetyltransferase; N-acetyltransferase GCN5 complement(3460322..3460783) Burkholderia phytofirmans PsJN 6279932 YP_001890735.1 CDS Bphyt_7076 NC_010676.1 3460961 3461380 R KEGG: bja:blr6329 hypothetical protein; hypothetical protein complement(3460961..3461380) Burkholderia phytofirmans PsJN 6279933 YP_001890736.1 CDS Bphyt_7077 NC_010676.1 3461407 3462510 R PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B0194 putative sarcosine oxidase; FAD dependent oxidoreductase complement(3461407..3462510) Burkholderia phytofirmans PsJN 6278859 YP_001890737.1 CDS Bphyt_7078 NC_010676.1 3462648 3462851 R KEGG: bxe:Bxe_B0195 hypothetical protein; hypothetical protein complement(3462648..3462851) Burkholderia phytofirmans PsJN 6278860 YP_001890738.1 CDS Bphyt_7079 NC_010676.1 3463028 3464089 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_B0196 putative DMT superfamily transporter; hypothetical protein complement(3463028..3464089) Burkholderia phytofirmans PsJN 6278419 YP_001890739.1 CDS Bphyt_7080 NC_010676.1 3464420 3465037 D PFAM: Lipocalin family protein; KEGG: bxe:Bxe_B0197 putative outer membrane lipoprotein; lipocalin family protein 3464420..3465037 Burkholderia phytofirmans PsJN 6278420 YP_001890740.1 CDS Bphyt_7081 NC_010676.1 3465108 3465884 D PFAM: protein of unknown function DUF1295; KEGG: bxe:Bxe_B0198 hypothetical protein; hypothetical protein 3465108..3465884 Burkholderia phytofirmans PsJN 6278912 YP_001890741.1 CDS Bphyt_7082 NC_010676.1 3465948 3467048 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bxe:Bxe_B0199 putative cyclopropane-fatty-acyl-phospholipid synthase; type 11 methyltransferase 3465948..3467048 Burkholderia phytofirmans PsJN 6278913 YP_001890742.1 CDS Bphyt_7083 NC_010676.1 3467540 3468139 D PFAM: cytochrome B561; KEGG: bxe:Bxe_B0201 putative cytochrome b-561 protein; cytochrome B561 3467540..3468139 Burkholderia phytofirmans PsJN 6278295 YP_001890743.1 CDS Bphyt_7084 NC_010676.1 3468189 3469640 D PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_B0202 putative glycosyltransferase; glycosyl transferase 3468189..3469640 Burkholderia phytofirmans PsJN 6278296 YP_001890744.1 CDS Bphyt_7085 NC_010676.1 3469806 3471026 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B0203 putative Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 3469806..3471026 Burkholderia phytofirmans PsJN 6279681 YP_001890745.1 CDS Bphyt_7086 NC_010676.1 3471414 3471827 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: rme:Rmet_3710 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 3471414..3471827 Burkholderia phytofirmans PsJN 6279682 YP_001890746.1 CDS Bphyt_7087 NC_010676.1 3471859 3472713 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0206 short chain dehydrogenase; short chain dehydrogenase complement(3471859..3472713) Burkholderia phytofirmans PsJN 6279677 YP_001890747.1 CDS Bphyt_7088 NC_010676.1 3472890 3473819 R activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; DNA-binding transcriptional regulator LysR complement(3472890..3473819) Burkholderia phytofirmans PsJN 6279678 YP_001890748.1 CDS Bphyt_7089 NC_010676.1 3473937 3475178 D catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 3473937..3475178 Burkholderia phytofirmans PsJN 6277930 YP_001890749.1 CDS Bphyt_7090 NC_010676.1 3475203 3476123 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0207 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3475203..3476123) Burkholderia phytofirmans PsJN 6277931 YP_001890750.1 CDS Bphyt_7091 NC_010676.1 3476246 3477037 D PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B0208 ABC basic amino acid family transporter, periplasmic ligand binding protein; family 3 extracellular solute-binding protein 3476246..3477037 Burkholderia phytofirmans PsJN 6278749 YP_001890751.1 CDS Bphyt_7092 NC_010676.1 3477069 3478184 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bxe:Bxe_B0209 putative arginine/ornithine transport operon(AotO) protein; succinylglutamate desuccinylase/aspartoacylase 3477069..3478184 Burkholderia phytofirmans PsJN 6278750 YP_001890752.1 CDS Bphyt_7093 NC_010676.1 3478207 3478476 R KEGG: bxe:Bxe_B0210 hypothetical protein; hypothetical protein complement(3478207..3478476) Burkholderia phytofirmans PsJN 6280071 YP_001890753.1 CDS Bphyt_7094 NC_010676.1 3478623 3480776 R KEGG: bxe:Bxe_B0211 non-hemolytic phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phospholipase C complement(3478623..3480776) Burkholderia phytofirmans PsJN 6280072 YP_001890754.1 CDS Bphyt_7095 NC_010676.1 3481360 3483348 D PFAM: Amylo-alpha-16-glucosidase; KEGG: bxe:Bxe_B0213 putative glycogen debranching protein; amylo-alpha-16-glucosidase 3481360..3483348 Burkholderia phytofirmans PsJN 6279368 YP_001890755.1 CDS Bphyt_7096 NC_010676.1 3483400 3486207 D KEGG: bxe:Bxe_B0214 hypothetical protein; hypothetical protein 3483400..3486207 Burkholderia phytofirmans PsJN 6279369 YP_001890756.1 CDS Bphyt_7097 NC_010676.1 3486380 3487987 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3486380..3487987 Burkholderia phytofirmans PsJN 6278838 YP_001890757.1 CDS Bphyt_7098 NC_010676.1 3488203 3488982 D PFAM: ROK family protein; KEGG: bxe:Bxe_B0216 putative polyphosphate glucokinase; ROK family protein 3488203..3488982 Burkholderia phytofirmans PsJN 6278839 YP_001890758.1 CDS Bphyt_7099 NC_010676.1 3489022 3489591 D PFAM: PEBP family protein; KEGG: pfl:PFL_0171 conserved hypothetical protein TIGR00481, putative; PEBP family protein 3489022..3489591 Burkholderia phytofirmans PsJN 6278593 YP_001890759.1 CDS Bphyt_7100 NC_010676.1 3489625 3490620 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B0217 putative oxidoreductase; aldo/keto reductase complement(3489625..3490620) Burkholderia phytofirmans PsJN 6278594 YP_001890760.1 CDS Bphyt_7101 NC_010676.1 3491074 3493272 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_B0218 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3491074..3493272 Burkholderia phytofirmans PsJN 6279029 YP_001890761.1 CDS Bphyt_7102 NC_010676.1 3493342 3494025 D PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: bxe:Bxe_B0219 putative hydroxylase; hydroxylase 3493342..3494025 Burkholderia phytofirmans PsJN 6279030 YP_001890762.1 CDS Bphyt_7103 NC_010676.1 3494022 3494744 D PFAM: PepSY-associated TM helix domain protein; KEGG: bxe:Bxe_B0220 hypothetical protein; PepSY-associated TM helix domain-containing protein 3494022..3494744 Burkholderia phytofirmans PsJN 6280365 YP_001890763.1 CDS Bphyt_7104 NC_010676.1 3495074 3500014 D KEGG: bxe:Bxe_B0221 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 3495074..3500014 Burkholderia phytofirmans PsJN 6280366 YP_001890764.1 CDS Bphyt_7105 NC_010676.1 3500122 3500811 D PFAM: nitroreductase; KEGG: bxe:Bxe_B0222 putative nitroreductase; nitroreductase 3500122..3500811 Burkholderia phytofirmans PsJN 6278890 YP_001890765.1 CDS Bphyt_7106 NC_010676.1 3500860 3501171 D PFAM: High potential iron-sulfur protein; KEGG: bxe:Bxe_B0223 putative high-potential iron-sulfur protein; high potential iron-sulfur protein 3500860..3501171 Burkholderia phytofirmans PsJN 6278891 YP_001890766.1 CDS Bphyt_7107 NC_010676.1 3501224 3501574 R PFAM: Dopa 45-dioxygenase; KEGG: bxe:Bxe_B0224 putative dioxygenase; Dopa 45-dioxygenase complement(3501224..3501574) Burkholderia phytofirmans PsJN 6280173 YP_001890767.1 CDS Bphyt_7108 NC_010676.1 3501610 3502083 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0225 putative acetyltransferase; N-acetyltransferase GCN5 complement(3501610..3502083) Burkholderia phytofirmans PsJN 6280174 YP_001890768.1 CDS Bphyt_7109 NC_010676.1 3502460 3502753 D KEGG: bxe:Bxe_B1020 hypothetical protein; hypothetical protein 3502460..3502753 Burkholderia phytofirmans PsJN 6279606 YP_001890769.1 CDS Bphyt_7110 NC_010676.1 3502887 3503159 D KEGG: bxe:Bxe_B0226 hypothetical protein; hypothetical protein 3502887..3503159 Burkholderia phytofirmans PsJN 6279607 YP_001890770.1 CDS Bphyt_7111 NC_010676.1 3504180 3504653 D KEGG: bxe:Bxe_B0229 hypothetical protein; hypothetical protein 3504180..3504653 Burkholderia phytofirmans PsJN 6278085 YP_001890771.1 CDS Bphyt_7112 NC_010676.1 3505005 3505358 D PFAM: DGPFAETKE family protein; KEGG: bxe:Bxe_B0231 hypothetical protein; DGPFAETKE family protein 3505005..3505358 Burkholderia phytofirmans PsJN 6278086 YP_001890772.1 CDS Bphyt_7113 NC_010676.1 3505507 3505920 D PFAM: DGPFAETKE family protein; KEGG: bxe:Bxe_B0232 hypothetical protein; DGPFAETKE family protein 3505507..3505920 Burkholderia phytofirmans PsJN 6278628 YP_001890773.1 CDS Bphyt_7115 NC_010676.1 3506107 3506514 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0233 putative glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3506107..3506514 Burkholderia phytofirmans PsJN 6280003 YP_001890774.1 CDS Bphyt_7116 NC_010676.1 3506519 3507793 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B0234 unknown sigma factor; ECF subfamily RNA polymerase sigma-24 subunit 3506519..3507793 Burkholderia phytofirmans PsJN 6280004 YP_001890775.1 CDS Bphyt_7117 NC_010676.1 3507830 3508519 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: chu:CHU_0633 hypothetical protein; type 11 methyltransferase complement(3507830..3508519) Burkholderia phytofirmans PsJN 6278309 YP_001890776.1 CDS Bphyt_7118 NC_010676.1 3508703 3509320 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_C0721 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA complement(3508703..3509320) Burkholderia phytofirmans PsJN 6278310 YP_001890777.1 CDS Bphyt_7119 NC_010676.1 3509378 3509956 R KEGG: bxe:Bxe_B0237 putative tranmembrane protein; tranmembrane protein complement(3509378..3509956) Burkholderia phytofirmans PsJN 6277914 YP_001890778.1 CDS Bphyt_7120 NC_010676.1 3510085 3510261 R PFAM: protein of unknown function DUF1427; KEGG: bxe:Bxe_B0238 hypothetical protein; hypothetical protein complement(3510085..3510261) Burkholderia phytofirmans PsJN 6277915 YP_001890779.1 CDS Bphyt_7121 NC_010676.1 3510317 3511282 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B0239 putative zinc-containing alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(3510317..3511282) Burkholderia phytofirmans PsJN 6279338 YP_001890780.1 CDS Bphyt_7122 NC_010676.1 3511432 3512262 R PFAM: AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B0240 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(3511432..3512262) Burkholderia phytofirmans PsJN 6279339 YP_001890781.1 CDS Bphyt_7123 NC_010676.1 3512438 3513382 R PFAM: Auxin Efflux Carrier; KEGG: bxe:Bxe_B0241 putative malonate transporter, AEC family; auxin efflux carrier complement(3512438..3513382) Burkholderia phytofirmans PsJN 6279286 YP_001890782.1 CDS Bphyt_7124 NC_010676.1 3513507 3514373 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0242 transcriptional regulator, LysR family; LysR family transcriptional regulator 3513507..3514373 Burkholderia phytofirmans PsJN 6279287 YP_001890783.1 CDS Bphyt_7125 NC_010676.1 3514383 3515057 R KEGG: bxe:Bxe_B0243 hypothetical protein; hypothetical protein complement(3514383..3515057) Burkholderia phytofirmans PsJN 6278813 YP_001890784.1 CDS Bphyt_7126 NC_010676.1 3515252 3515785 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0244 putative acetyltransferase, GnaT family; N-acetyltransferase GCN5 3515252..3515785 Burkholderia phytofirmans PsJN 6278814 YP_001890785.1 CDS Bphyt_7127 NC_010676.1 3515864 3516601 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0245 putative acetyltransferase, GnaT family; N-acetyltransferase GCN5 complement(3515864..3516601) Burkholderia phytofirmans PsJN 6278669 YP_001890786.1 CDS Bphyt_7128 NC_010676.1 3516734 3518257 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_B0246 transcriptional regulator, GntR family; GntR family transcriptional regulator 3516734..3518257 Burkholderia phytofirmans PsJN 6278670 YP_001890787.1 CDS Bphyt_7129 NC_010676.1 3518488 3518820 D KEGG: bxe:Bxe_B0247 hypothetical protein; hypothetical protein 3518488..3518820 Burkholderia phytofirmans PsJN 6278052 YP_001890788.1 CDS Bphyt_7130 NC_010676.1 3518889 3519692 R PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: spe:Spro_2227 aminoglycoside/hydroxyurea antibiotic resistance kinase; aminoglycoside/hydroxyurea antibiotic resistance kinase complement(3518889..3519692) Burkholderia phytofirmans PsJN 6278053 YP_001890789.1 CDS Bphyt_7131 NC_010676.1 3519879 3520463 D PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_B0249 putative flavin reductase; flavin reductase domain-containing protein 3519879..3520463 Burkholderia phytofirmans PsJN 6278906 YP_001890790.1 CDS Bphyt_7132 NC_010676.1 3520488 3520817 R KEGG: bch:Bcen2424_1663 low molecular weight phosphotyrosine protein phosphatase; low molecular weight phosphotyrosine protein phosphatase complement(3520488..3520817) Burkholderia phytofirmans PsJN 6278907 YP_001890791.1 CDS Bphyt_7133 NC_010676.1 3520870 3521355 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0250 putative acetyltransferase, GnaT family; N-acetyltransferase GCN5 complement(3520870..3521355) Burkholderia phytofirmans PsJN 6277727 YP_001890792.1 CDS Bphyt_7134 NC_010676.1 3521721 3522935 D KEGG: bur:Bcep18194_C7257 threonyl-tRNA synthetase, class IIa; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; threonyl-tRNA synthetase 3521721..3522935 Burkholderia phytofirmans PsJN 6277728 YP_001890793.1 CDS Bphyt_7135 NC_010676.1 3523052 3523801 R PFAM: Asp/Glu/hydantoin racemase; KEGG: bur:Bcep18194_B0631 Asp/Glu racemase; Asp/Glu/hydantoin racemase complement(3523052..3523801) Burkholderia phytofirmans PsJN 6278703 YP_001890794.1 CDS Bphyt_7136 NC_010676.1 3523822 3525207 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bur:Bcep18194_B0632 amidohydrolase; amidohydrolase complement(3523822..3525207) Burkholderia phytofirmans PsJN 6278704 YP_001890795.1 CDS Bphyt_7137 NC_010676.1 3525282 3526622 R TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_B0633 xanthine/uracil transporter; xanthine permease complement(3525282..3526622) Burkholderia phytofirmans PsJN 6279887 YP_001890796.1 CDS Bphyt_7138 NC_010676.1 3526712 3527794 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bur:Bcep18194_B0634 cobalamin synthesis protein/P47K; cobalamin synthesis protein P47K complement(3526712..3527794) Burkholderia phytofirmans PsJN 6279888 YP_001890797.1 CDS Bphyt_7139 NC_010676.1 3527835 3528425 R TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: bur:Bcep18194_B0635 phenylacrylic acid decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(3527835..3528425) Burkholderia phytofirmans PsJN 6280400 YP_001890798.1 CDS Bphyt_7140 NC_010676.1 3528422 3529816 R TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: bur:Bcep18194_B0636 carboxylyase-related protein; UbiD family decarboxylase complement(3528422..3529816) Burkholderia phytofirmans PsJN 6280401 YP_001890799.1 CDS Bphyt_7141 NC_010676.1 3529892 3530818 R PFAM: amidohydrolase 2; KEGG: bmu:Bmul_3610 amidohydrolase 2; amidohydrolase 2 complement(3529892..3530818) Burkholderia phytofirmans PsJN 6280456 YP_001890800.1 CDS Bphyt_7142 NC_010676.1 3530818 3531774 R PFAM: amidohydrolase 2; KEGG: reu:Reut_A3069 amidohydrolase 2; amidohydrolase 2 complement(3530818..3531774) Burkholderia phytofirmans PsJN 6280457 YP_001890801.1 CDS Bphyt_7143 NC_010676.1 3532016 3532903 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_3612 transcriptional regulator, LysR family; LysR family transcriptional regulator 3532016..3532903 Burkholderia phytofirmans PsJN 6280274 YP_001890802.1 CDS Bphyt_7144 NC_010676.1 3532900 3533796 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0640 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3532900..3533796) Burkholderia phytofirmans PsJN 6280275 YP_001890803.1 CDS Bphyt_7145 NC_010676.1 3533944 3534471 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B0641 iron sulfer protein; (2Fe-2S)-binding domain-containing protein 3533944..3534471 Burkholderia phytofirmans PsJN 6279948 YP_001890804.1 CDS Bphyt_7146 NC_010676.1 3534472 3536730 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bur:Bcep18194_B0642 aldehyde oxidase; acylaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 3534472..3536730 Burkholderia phytofirmans PsJN 6279949 YP_001890805.1 CDS Bphyt_7147 NC_010676.1 3536904 3538211 R PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_II1097 major facilitator family transporter; major facilitator superfamily protein complement(3536904..3538211) Burkholderia phytofirmans PsJN 6279576 YP_001890806.1 CDS Bphyt_7148 NC_010676.1 3538535 3539278 R PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: rso:RS03035 probable transcription regulator protein; GntR family transcriptional regulator complement(3538535..3539278) Burkholderia phytofirmans PsJN 6279577 YP_001890807.1 CDS Bphyt_7149 NC_010676.1 3539423 3540727 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: psp:PSPPH_3047 major facilitator family transporter; major facilitator superfamily protein 3539423..3540727 Burkholderia phytofirmans PsJN 6279907 YP_001890808.1 CDS Bphyt_7150 NC_010676.1 3540724 3541611 D PFAM: amidohydrolase 2; KEGG: bmn:BMA10247_0669 amidohydrolase family protein; amidohydrolase 2 3540724..3541611 Burkholderia phytofirmans PsJN 6279908 YP_001890809.1 CDS Bphyt_7151 NC_010676.1 3541616 3543280 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B0300 ABC transporter, duplicated ATPase subunits; ABC transporter-like protein complement(3541616..3543280) Burkholderia phytofirmans PsJN 6279182 YP_001890810.1 CDS Bphyt_7152 NC_010676.1 3543673 3543912 D KEGG: bam:Bamb_5734 hypothetical protein; hypothetical protein 3543673..3543912 Burkholderia phytofirmans PsJN 6279183 YP_001890811.1 CDS Bphyt_7153 NC_010676.1 3544068 3545120 D PFAM: alpha/beta hydrolase fold; KEGG: sme:SMb20216 putative epoxide hydrolase protein; alpha/beta fold family hydrolase 3544068..3545120 Burkholderia phytofirmans PsJN 6279761 YP_001890812.1 CDS Bphyt_7154 NC_010676.1 3545453 3546892 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_A2189 putative ATP-dependent RNA helicase, RhlE; DEAD/DEAH box helicase 3545453..3546892 Burkholderia phytofirmans PsJN 6279762 YP_001890813.1 CDS Bphyt_7155 NC_010676.1 3547522 3548640 D KEGG: rru:Rru_A3686 alanine dehydrogenase and pyridine nucleotide transhydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; alanine dehydrogenase/PNT domain protein; alanine dehydrogenase 3547522..3548640 Burkholderia phytofirmans PsJN 6279447 YP_001890814.1 CDS Bphyt_7157 NC_010676.1 3548963 3549796 R PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: bxe:Bxe_B0261 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(3548963..3549796) Burkholderia phytofirmans PsJN 6279264 YP_001890815.1 CDS Bphyt_7158 NC_010676.1 3549882 3551390 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0272 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter complement(3549882..3551390) Burkholderia phytofirmans PsJN 6279265 YP_001890816.1 CDS Bphyt_7159 NC_010676.1 3551577 3552254 R PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_B0273 putative glutathione S-transferase; glutathione S-transferase domain complement(3551577..3552254) Burkholderia phytofirmans PsJN 6277802 YP_001890817.1 CDS Bphyt_7160 NC_010676.1 3552328 3553551 R PFAM: dienelactone hydrolase; KEGG: bxe:Bxe_B0274 carboxymethylenebutenolidase; carboxymethylenebutenolidase complement(3552328..3553551) Burkholderia phytofirmans PsJN 6277803 YP_001890818.1 CDS Bphyt_7161 NC_010676.1 3553581 3555221 R PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_B0275 putative acid-coenzyme A ligase; AMP-dependent synthetase and ligase complement(3553581..3555221) Burkholderia phytofirmans PsJN 6278289 YP_001890819.1 CDS Bphyt_7162 NC_010676.1 3555293 3555688 R PFAM: Endoribonuclease L-PSP; KEGG: bxe:Bxe_B0276 putative aerobic 2-aminobenzoate; endoribonuclease L-PSP complement(3555293..3555688) Burkholderia phytofirmans PsJN 6278290 YP_001890820.1 CDS Bphyt_7163 NC_010676.1 3555685 3556128 R PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_B0277 putative 4-hydroxybenzoyl CoA thioesterase; thioesterase superfamily protein complement(3555685..3556128) Burkholderia phytofirmans PsJN 6279154 YP_001890821.1 CDS Bphyt_7164 NC_010676.1 3556125 3557333 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B0278 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(3556125..3557333) Burkholderia phytofirmans PsJN 6279155 YP_001890822.1 CDS Bphyt_7165 NC_010676.1 3557335 3558186 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(3557335..3558186) Burkholderia phytofirmans PsJN 6278808 YP_001890823.1 CDS Bphyt_7166 NC_010676.1 3558214 3558777 R PFAM: regulatory protein MarR; KEGG: bxe:Bxe_B0280 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(3558214..3558777) Burkholderia phytofirmans PsJN 6278809 YP_001890824.1 CDS Bphyt_7167 NC_010676.1 3558774 3559547 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0281 putative short-chain dehydrogenase, oxidoreductase; short-chain dehydrogenase/reductase SDR complement(3558774..3559547) Burkholderia phytofirmans PsJN 6279117 YP_001890825.1 CDS Bphyt_7168 NC_010676.1 3559544 3561916 R catalyzes the conversion of salicylyl-CoA to gentisyl-CoA; salicylyl-CoA 5-hydroxylase complement(3559544..3561916) Burkholderia phytofirmans PsJN 6279118 YP_001890826.1 CDS Bphyt_7169 NC_010676.1 3562186 3563556 D PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: reu:Reut_B3496 protein of unknown function DUF1214:protein of unknown function DUF1254; hypothetical protein 3562186..3563556 Burkholderia phytofirmans PsJN 6279398 YP_001890827.1 CDS Bphyt_7170 NC_010676.1 3563856 3564413 R KEGG: bxe:Bxe_A0773 hypothetical protein; hypothetical protein complement(3563856..3564413) Burkholderia phytofirmans PsJN 6279399 YP_001890828.1 CDS Bphyt_7171 NC_010676.1 3564763 3565134 D KEGG: csa:Csal_1078 hypothetical protein; hypothetical protein 3564763..3565134 Burkholderia phytofirmans PsJN 6278115 YP_001890829.1 CDS Bphyt_7172 NC_010676.1 3565185 3566621 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2292 major facilitator superfamily MFS_1; major facilitator superfamily protein 3565185..3566621 Burkholderia phytofirmans PsJN 6278116 YP_001890830.1 CDS Bphyt_7173 NC_010676.1 3566704 3567474 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_A4032 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3566704..3567474) Burkholderia phytofirmans PsJN 6278072 YP_001890831.1 CDS Bphyt_7174 NC_010676.1 3567530 3568384 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A4031 alpha/beta hydrolase; alpha/beta fold family hydrolase complement(3567530..3568384) Burkholderia phytofirmans PsJN 6278073 YP_001890832.1 CDS Bphyt_7175 NC_010676.1 3568477 3569172 R KEGG: bur:Bcep18194_A4030 hypothetical protein; hypothetical protein complement(3568477..3569172) Burkholderia phytofirmans PsJN 6278264 YP_001890833.1 CDS Bphyt_7176 NC_010676.1 3569346 3569978 D PFAM: protein of unknown function DUF1470; KEGG: bur:Bcep18194_A4029 protein of unknown function DUF1470; hypothetical protein 3569346..3569978 Burkholderia phytofirmans PsJN 6278265 YP_001890834.1 CDS Bphyt_7177 NC_010676.1 3570165 3570620 D KEGG: bxe:Bxe_C1374 hypothetical protein; hypothetical protein 3570165..3570620 Burkholderia phytofirmans PsJN 6278188 YP_001890835.1 CDS Bphyt_7178 NC_010676.1 3570643 3571065 R TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bxe:Bxe_B0302 arsenate reductase; arsenate reductase complement(3570643..3571065) Burkholderia phytofirmans PsJN 6278189 YP_001890836.1 CDS Bphyt_7179 NC_010676.1 3571062 3572147 R TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bxe:Bxe_B0303 arsenite/antimonite exporter, ArsB like; arsenical-resistance protein complement(3571062..3572147) Burkholderia phytofirmans PsJN 6279172 YP_001890837.1 CDS Bphyt_7180 NC_010676.1 3572144 3572470 R PFAM: regulatory protein ArsR; KEGG: bxe:Bxe_B0304 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(3572144..3572470) Burkholderia phytofirmans PsJN 6279173 YP_001890838.1 CDS Bphyt_7181 NC_010676.1 3572699 3573373 D KEGG: rpb:RPB_2704 nitrile hydratase, alpha subunit; TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; nitrile hydratase subunit alpha 3572699..3573373 Burkholderia phytofirmans PsJN 6278261 YP_001890839.1 CDS Bphyt_7182 NC_010676.1 3573370 3574041 D PFAM: nitrile hydratase beta subunit; KEGG: mrd:Mrad2831_0905 nitrile hydratase; nitrile hydratase 3573370..3574041 Burkholderia phytofirmans PsJN 6278262 YP_001890840.1 CDS Bphyt_7183 NC_010676.1 3574034 3574402 D KEGG: bja:bll4496 hypothetical protein; hypothetical protein 3574034..3574402 Burkholderia phytofirmans PsJN 6277446 YP_001890841.1 CDS Bphyt_7184 NC_010676.1 3574491 3574976 D PFAM: Endoribonuclease L-PSP; KEGG: ret:RHE_CH00458 hypothetical protein; endoribonuclease L-PSP 3574491..3574976 Burkholderia phytofirmans PsJN 6277447 YP_001890842.1 CDS Bphyt_7185 NC_010676.1 3575031 3575477 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bpt:Bpet3888 hypothetical protein; Activator of Hsp90 ATPase 1 family protein complement(3575031..3575477) Burkholderia phytofirmans PsJN 6277998 YP_001890843.1 CDS Bphyt_7187 NC_010676.1 3575888 3576139 R KEGG: bam:Bamb_3896 hypothetical protein; hypothetical protein complement(3575888..3576139) Burkholderia phytofirmans PsJN 6280368 YP_001890844.1 CDS Bphyt_7188 NC_010676.1 3576317 3576775 D PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bja:bll4008 hypothetical protein; cupin 3576317..3576775 Burkholderia phytofirmans PsJN 6280369 YP_001890845.1 CDS Bphyt_7189 NC_010676.1 3576866 3577303 D PFAM: Domain of unknown function DUF1801; KEGG: bcm:Bcenmc03_3601 domain of unknown function DUF1801; hypothetical protein 3576866..3577303 Burkholderia phytofirmans PsJN 6280190 YP_001890846.1 CDS Bphyt_7190 NC_010676.1 3577563 3577874 D KEGG: bxe:Bxe_B0405 hypothetical protein; hypothetical protein 3577563..3577874 Burkholderia phytofirmans PsJN 6280191 YP_001890847.1 CDS Bphyt_7191 NC_010676.1 3577924 3578952 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase II complement(3577924..3578952) Burkholderia phytofirmans PsJN 6279862 YP_001890848.1 CDS Bphyt_7192 NC_010676.1 3579260 3579598 R KEGG: bxe:Bxe_B0407 hypothetical protein; hypothetical protein complement(3579260..3579598) Burkholderia phytofirmans PsJN 6279863 YP_001890849.1 CDS Bphyt_7193 NC_010676.1 3579718 3581139 R PFAM: Aldehyde Dehydrogenase_; KEGG: rme:Rmet_1898 aldehyde dehydrogenase; aldehyde dehydrogenase complement(3579718..3581139) Burkholderia phytofirmans PsJN 6278597 YP_001890850.1 CDS Bphyt_7194 NC_010676.1 3581238 3582176 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rsq:Rsph17025_3825 hypothetical protein; LysR family transcriptional regulator 3581238..3582176 Burkholderia phytofirmans PsJN 6278598 YP_001890851.1 CDS Bphyt_7195 NC_010676.1 3582304 3584238 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_B0409 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 3582304..3584238 Burkholderia phytofirmans PsJN 6279733 YP_001890852.1 CDS Bphyt_7196 NC_010676.1 3584269 3584688 D KEGG: bxe:Bxe_B0410 hypothetical protein; hypothetical protein 3584269..3584688 Burkholderia phytofirmans PsJN 6279734 YP_001890853.1 CDS Bphyt_7197 NC_010676.1 3584825 3585049 D KEGG: bxe:Bxe_B0411 hypothetical protein; hypothetical protein 3584825..3585049 Burkholderia phytofirmans PsJN 6279266 YP_001890854.1 CDS Bphyt_7198 NC_010676.1 3585436 3587127 D PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B0412 metallophosphoesterase; metallophosphoesterase 3585436..3587127 Burkholderia phytofirmans PsJN 6279267 YP_001890855.1 CDS Bphyt_7199 NC_010676.1 3587135 3587272 D hypothetical protein 3587135..3587272 Burkholderia phytofirmans PsJN 6279925 YP_001890856.1 CDS Bphyt_7200 NC_010676.1 3587400 3587840 D PFAM: 17 kDa surface antigen; KEGG: bxe:Bxe_B0413 hypothetical protein; 17 kDa surface antigen 3587400..3587840 Burkholderia phytofirmans PsJN 6279926 YP_001890857.1 CDS Bphyt_7201 NC_010676.1 3588041 3588625 D KEGG: bxe:Bxe_B0414 hypothetical protein; hypothetical protein 3588041..3588625 Burkholderia phytofirmans PsJN 6278835 YP_001890858.1 CDS Bphyt_7202 NC_010676.1 3588771 3589157 R PFAM: ferric-uptake regulator; KEGG: aav:Aave_4555 ferric uptake regulator, Fur family; Fur family ferric uptake regulator complement(3588771..3589157) Burkholderia phytofirmans PsJN 6278836 YP_001890859.1 CDS Bphyt_7203 NC_010676.1 3589838 3590998 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B0415 outer membrane porin, OmpC family; porin 3589838..3590998 Burkholderia phytofirmans PsJN 6278897 YP_001890860.1 CDS Bphyt_7204 NC_010676.1 3591119 3591784 R PFAM: DSBA oxidoreductase; KEGG: bxe:Bxe_B0416 putative dithiol-disulfide isomerase; DSBA oxidoreductase complement(3591119..3591784) Burkholderia phytofirmans PsJN 6278898 YP_001890861.1 CDS Bphyt_7205 NC_010676.1 3592015 3592308 D PFAM: protein of unknown function DUF1330; KEGG: bxe:Bxe_B0417 hypothetical protein; hypothetical protein 3592015..3592308 Burkholderia phytofirmans PsJN 6278791 YP_001890862.1 CDS Bphyt_7206 NC_010676.1 3592371 3593222 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0418 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3592371..3593222) Burkholderia phytofirmans PsJN 6278792 YP_001890863.1 CDS Bphyt_7207 NC_010676.1 3593219 3594109 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0419 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3593219..3594109) Burkholderia phytofirmans PsJN 6278589 YP_001890864.1 CDS Bphyt_7208 NC_010676.1 3594255 3595487 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B0420 ABC sugar transporter, periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(3594255..3595487) Burkholderia phytofirmans PsJN 6278590 YP_001890865.1 CDS Bphyt_7209 NC_010676.1 3595872 3596645 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR domain protein; KEGG: bxe:Bxe_B0421 short chain dehydrogenase; short chain dehydrogenase 3595872..3596645 Burkholderia phytofirmans PsJN 6278773 YP_001890866.1 CDS Bphyt_7210 NC_010676.1 3596710 3597792 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0422 ABC sugar transporter, ATPase subunit; ABC transporter-like protein 3596710..3597792 Burkholderia phytofirmans PsJN 6278774 YP_001890867.1 CDS Bphyt_7211 NC_010676.1 3597966 3598829 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_B0423 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 3597966..3598829 Burkholderia phytofirmans PsJN 6277687 YP_001890868.1 CDS Bphyt_7212 NC_010676.1 3598842 3599729 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0425 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(3598842..3599729) Burkholderia phytofirmans PsJN 6277688 YP_001890869.1 CDS Bphyt_7213 NC_010676.1 3599726 3600613 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bxe:Bxe_B0426 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(3599726..3600613) Burkholderia phytofirmans PsJN 6278640 YP_001890870.1 CDS Bphyt_7214 NC_010676.1 3600852 3601811 D PFAM: beta-lactamase domain protein; KEGG: bxe:Bxe_B0427 hypothetical protein; beta-lactamase domain-containing protein 3600852..3601811 Burkholderia phytofirmans PsJN 6278641 YP_001890871.1 CDS Bphyt_7215 NC_010676.1 3601865 3603574 D PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0428 hypothetical protein; FAD-dependent oxidoreductase 3601865..3603574 Burkholderia phytofirmans PsJN 6278914 YP_001890872.1 CDS Bphyt_7216 NC_010676.1 3603640 3603876 D KEGG: bxe:Bxe_B0429 hypothetical protein; hypothetical protein 3603640..3603876 Burkholderia phytofirmans PsJN 6278915 YP_001890873.1 CDS Bphyt_7217 NC_010676.1 3604187 3604663 D hypothetical protein 3604187..3604663 Burkholderia phytofirmans PsJN 6279312 YP_001890874.1 CDS Bphyt_7218 NC_010676.1 3604751 3605446 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: bxe:Bxe_B0431 putative phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 3604751..3605446 Burkholderia phytofirmans PsJN 6279313 YP_001890875.1 CDS Bphyt_7219 NC_010676.1 3605467 3606312 R KEGG: bxe:Bxe_B0432 hypothetical protein; hypothetical protein complement(3605467..3606312) Burkholderia phytofirmans PsJN 6278869 YP_001890876.1 CDS Bphyt_7220 NC_010676.1 3606325 3606804 R KEGG: bxe:Bxe_B0433 hypothetical protein; hypothetical protein complement(3606325..3606804) Burkholderia phytofirmans PsJN 6278870 YP_001890877.1 CDS Bphyt_7221 NC_010676.1 3606958 3607623 R PFAM: nitroreductase; KEGG: bte:BTH_II1923 nitroreductase family protein; nitroreductase complement(3606958..3607623) Burkholderia phytofirmans PsJN 6279014 YP_001890878.1 CDS Bphyt_7222 NC_010676.1 3607900 3609147 D PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0434 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein 3607900..3609147 Burkholderia phytofirmans PsJN 6279015 YP_001890879.1 CDS Bphyt_7223 NC_010676.1 3609187 3609669 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_B0435 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(3609187..3609669) Burkholderia phytofirmans PsJN 6277992 YP_001890880.1 CDS Bphyt_7224 NC_010676.1 3610052 3610423 R hypothetical protein complement(3610052..3610423) Burkholderia phytofirmans PsJN 6277993 YP_001890881.1 CDS Bphyt_7225 NC_010676.1 3610688 3610855 R hypothetical protein complement(3610688..3610855) Burkholderia phytofirmans PsJN 6279124 YP_001890882.1 CDS Bphyt_7226 NC_010676.1 3610874 3611929 R PFAM: regulatory protein LacI; KEGG: bxe:Bxe_B0437 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(3610874..3611929) Burkholderia phytofirmans PsJN 6279125 YP_001890883.1 CDS Bphyt_7227 NC_010676.1 3612132 3613157 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bxe:Bxe_B0438 TRAP dicarboxylate transporter, periplasmic ligand binding subunit DctP; TRAP dicarboxylate transporter subunit DctP 3612132..3613157 Burkholderia phytofirmans PsJN 6277858 YP_001890884.1 CDS Bphyt_7228 NC_010676.1 3613220 3615106 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bxe:Bxe_B0439 TRAP dicarboxylate transporter, fused DctM (12TM) and DctQ (4TM) subunits; TRAP dicarboxylate transporter subunit DctM 3613220..3615106 Burkholderia phytofirmans PsJN 6277859 YP_001890885.1 CDS Bphyt_7229 NC_010676.1 3615210 3615749 D KEGG: bxe:Bxe_B0440 putative lactoylglutathione lyase; lactoylglutathione lyase 3615210..3615749 Burkholderia phytofirmans PsJN 6280486 YP_001890886.1 CDS Bphyt_7230 NC_010676.1 3615746 3617044 D PFAM: ribulose bisphosphate carboxylase large chain; KEGG: bxe:Bxe_B0441 rubisco-like protein; RuBisCO-like protein 3615746..3617044 Burkholderia phytofirmans PsJN 6280487 YP_001890887.1 CDS Bphyt_7231 NC_010676.1 3617071 3618417 D PFAM: type III effector Hrp-dependent outers; KEGG: bxe:Bxe_B0442 hypothetical protein; Hrp-dependent type III effector protein 3617071..3618417 Burkholderia phytofirmans PsJN 6280306 YP_001890888.1 CDS Bphyt_7232 NC_010676.1 3618414 3619214 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0443 putative glucose 1-dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3618414..3619214) Burkholderia phytofirmans PsJN 6280307 YP_001890889.1 CDS Bphyt_7233 NC_010676.1 3619363 3619518 R KEGG: bxe:Bxe_B0444 hypothetical protein; hypothetical protein complement(3619363..3619518) Burkholderia phytofirmans PsJN 6279086 YP_001890890.1 CDS Bphyt_7234 NC_010676.1 3619664 3620899 R PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0445 major facilitator family (MFS) transporter; major facilitator superfamily protein complement(3619664..3620899) Burkholderia phytofirmans PsJN 6279087 YP_001890891.1 CDS Bphyt_7235 NC_010676.1 3620989 3621603 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B0446 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3620989..3621603) Burkholderia phytofirmans PsJN 6279426 YP_001890892.1 CDS Bphyt_7236 NC_010676.1 3621722 3623359 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4062 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily; major facilitator superfamily protein complement(3621722..3623359) Burkholderia phytofirmans PsJN 6279427 YP_001890893.1 CDS Bphyt_7237 NC_010676.1 3623367 3623654 R KEGG: bxe:Bxe_B0447 hypothetical protein; hypothetical protein complement(3623367..3623654) Burkholderia phytofirmans PsJN 6278591 YP_001890894.1 CDS Bphyt_7238 NC_010676.1 3624064 3624273 R KEGG: bxe:Bxe_B0463 hypothetical protein; hypothetical protein complement(3624064..3624273) Burkholderia phytofirmans PsJN 6278592 YP_001890895.1 CDS Bphyt_7239 NC_010676.1 3624457 3624741 R KEGG: bxe:Bxe_B0448 hypothetical protein; hypothetical protein complement(3624457..3624741) Burkholderia phytofirmans PsJN 6280407 YP_001890896.1 CDS Bphyt_7240 NC_010676.1 3624830 3625108 R KEGG: bxe:Bxe_B0465 hypothetical protein; hypothetical protein complement(3624830..3625108) Burkholderia phytofirmans PsJN 6280408 YP_001890897.1 CDS Bphyt_7241 NC_010676.1 3625747 3625953 R hypothetical protein complement(3625747..3625953) Burkholderia phytofirmans PsJN 6279326 YP_001893457.1 CDS Bphyt_7242 NC_010679.1 107 592 D KEGG: rme:Rmet_6295 hypothetical protein; hypothetical protein 107..592 Burkholderia phytofirmans PsJN 6280668 YP_001893458.1 CDS Bphyt_7243 NC_010679.1 605 2401 D KEGG: rme:Rmet_6294 hypothetical protein; hypothetical protein 605..2401 Burkholderia phytofirmans PsJN 6280713 YP_001893459.1 CDS Bphyt_7244 NC_010679.1 2404 3792 D KEGG: rme:Rmet_6293 hypothetical protein; hypothetical protein 2404..3792 Burkholderia phytofirmans PsJN 6280714 YP_001893460.1 CDS Bphyt_7245 NC_010679.1 3801 4601 D KEGG: mbb:BCG_0582 hypothetical protein; hypothetical protein 3801..4601 Burkholderia phytofirmans PsJN 6280715 YP_001893461.1 CDS Bphyt_7246 NC_010679.1 4608 6626 D PFAM: type II secretion system protein E; KEGG: rme:Rmet_6291 type II secretion system protein E; type II secretion system protein E 4608..6626 Burkholderia phytofirmans PsJN 6280716 YP_001893462.1 CDS Bphyt_7247 NC_010679.1 6650 7768 D KEGG: rme:Rmet_6290 type II secretory pathway component PulF-like protein; type II secretory pathway component PulF-like protein 6650..7768 Burkholderia phytofirmans PsJN 6280659 YP_001893463.1 CDS Bphyt_7248 NC_010679.1 7782 8426 D KEGG: rme:Rmet_6289 hypothetical protein; hypothetical protein 7782..8426 Burkholderia phytofirmans PsJN 6280660 YP_001893464.1 CDS Bphyt_7249 NC_010679.1 8499 9779 D KEGG: rme:Rmet_6288 hypothetical protein; hypothetical protein 8499..9779 Burkholderia phytofirmans PsJN 6280661 YP_001893465.1 CDS Bphyt_7250 NC_010679.1 10534 10998 D PFAM: ATP-binding region ATPase domain protein; KEGG: bxe:Bxe_A2886 multi-sensor signal transduction histidine kinase; histidine kinase 10534..10998 Burkholderia phytofirmans PsJN 6280662 YP_001893466.1 CDS Bphyt_7251 NC_010679.1 11115 11516 D PFAM: response regulator receiver; KEGG: bxe:Bxe_A2885 response regulator receiver domain protein(CheY); response regulator receiver protein 11115..11516 Burkholderia phytofirmans PsJN 6280727 YP_001893467.1 CDS Bphyt_7252 NC_010679.1 12038 12550 D PFAM: regulatory protein MarR; KEGG: mmr:Mmar10_1995 transcriptional regulator, MarR family; MarR family transcriptional regulator 12038..12550 Burkholderia phytofirmans PsJN 6280728 YP_001893468.1 CDS Bphyt_7253 NC_010679.1 12754 13758 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mms:mma_1222 vanillate monooxygenase, beta subunit; ferredoxin complement(12754..13758) Burkholderia phytofirmans PsJN 6280729 YP_001893469.1 CDS Bphyt_7254 NC_010679.1 13772 15064 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: bja:blr0938 putative dioxygenase; Rieske (2Fe-2S) domain-containing protein complement(13772..15064) Burkholderia phytofirmans PsJN 6280730 YP_001893470.1 CDS Bphyt_7255 NC_010679.1 15070 16416 R PFAM: major facilitator superfamily MFS_1; KEGG: rpd:RPD_4395 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(15070..16416) Burkholderia phytofirmans PsJN 6280731 YP_001893471.1 CDS Bphyt_7257 NC_010679.1 17007 17534 R PFAM: LysR substrate-binding; KEGG: mpt:Mpe_A3313 LysR family transcriptional regulatory protein; LysR family transcriptional regulator complement(17007..17534) Burkholderia phytofirmans PsJN 6280607 YP_001893472.1 CDS Bphyt_7258 NC_010679.1 17590 17805 R KEGG: bpt:Bpet3764 hypothetical protein; hypothetical protein complement(17590..17805) Burkholderia phytofirmans PsJN 6280608 YP_001893473.1 CDS Bphyt_7259 NC_010679.1 17807 18664 R SMART: AAA ATPase; KEGG: bxe:Bxe_C0709 putative ATPase; AAA ATPase complement(17807..18664) Burkholderia phytofirmans PsJN 6280609 YP_001893474.1 CDS Bphyt_7260 NC_010679.1 18661 20097 R PFAM: Integrase catalytic region; KEGG: bpt:Bpet3758 putative transposase; integrase catalytic subunit complement(18661..20097) Burkholderia phytofirmans PsJN 6280610 YP_001893475.1 CDS Bphyt_7261 NC_010679.1 20196 20774 R KEGG: bpt:Bpet3757 hypothetical protein; hypothetical protein complement(20196..20774) Burkholderia phytofirmans PsJN 6280709 YP_001893476.1 CDS Bphyt_7262 NC_010679.1 20901 21293 R KEGG: bvi:Bcep1808_5849 NmrA family protein; NmrA family protein complement(20901..21293) Burkholderia phytofirmans PsJN 6280710 YP_001893477.1 CDS Bphyt_7263 NC_010679.1 21599 22021 D KEGG: rso:RSc3072 hypothetical protein; hypothetical protein 21599..22021 Burkholderia phytofirmans PsJN 6280711 YP_001893478.1 CDS Bphyt_7264 NC_010679.1 22170 22385 R KEGG: bvi:Bcep1808_7610 hypothetical protein; hypothetical protein complement(22170..22385) Burkholderia phytofirmans PsJN 6280712 YP_001893479.1 CDS Bphyt_7265 NC_010679.1 22472 22660 R hypothetical protein complement(22472..22660) Burkholderia phytofirmans PsJN 6280683 YP_001893480.1 CDS Bphyt_7266 NC_010679.1 22799 23167 R PFAM: response regulator receiver; KEGG: bpt:Bpet3926 two component response regulator; response regulator receiver protein complement(22799..23167) Burkholderia phytofirmans PsJN 6280684 YP_001893481.1 CDS Bphyt_7267 NC_010679.1 23629 24282 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_A2884 two component transcriptional regulator, LuxR family; LuxR family two component transcriptional regulator 23629..24282 Burkholderia phytofirmans PsJN 6280685 YP_001893482.1 CDS Bphyt_7268 NC_010679.1 24367 24672 D KEGG: bvi:Bcep1808_7554 hypothetical protein; hypothetical protein 24367..24672 Burkholderia phytofirmans PsJN 6280686 YP_001893483.1 CDS Bphyt_7269 NC_010679.1 24690 24863 R hypothetical protein complement(24690..24863) Burkholderia phytofirmans PsJN 6280687 YP_001893484.1 CDS Bphyt_7270 NC_010679.1 24937 25128 R hypothetical protein complement(24937..25128) Burkholderia phytofirmans PsJN 6280646 YP_001893485.1 CDS Bphyt_7271 NC_010679.1 25549 27171 D KEGG: bxe:Bxe_A2886 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor protein 25549..27171 Burkholderia phytofirmans PsJN 6280647 YP_001893486.1 CDS Bphyt_7272 NC_010679.1 27216 27434 R hypothetical protein complement(27216..27434) Burkholderia phytofirmans PsJN 6280648 YP_001893487.1 CDS Bphyt_7273 NC_010679.1 27468 28610 R PFAM: integrase family protein; KEGG: spq:SPAB_05367 hypothetical protein; integrase family protein complement(27468..28610) Burkholderia phytofirmans PsJN 6280649 YP_001893488.1 CDS Bphyt_7274 NC_010679.1 28641 28880 R PFAM: helix-turn-helix domain protein; KEGG: bvi:Bcep1808_7399 transcriptional regulator, XRE family; Xre family transcriptional regulator complement(28641..28880) Burkholderia phytofirmans PsJN 6280601 YP_001893489.1 CDS Bphyt_7275 NC_010679.1 29046 30161 R KEGG: aba:Acid345_1497 hypothetical protein; hypothetical protein complement(29046..30161) Burkholderia phytofirmans PsJN 6280602 YP_001893490.1 CDS Bphyt_7276 NC_010679.1 30229 31026 R KEGG: bpl:BURPS1106A_A2174 PilL domain protein; hypothetical protein complement(30229..31026) Burkholderia phytofirmans PsJN 6280603 YP_001893491.1 CDS Bphyt_7277 NC_010679.1 31235 31435 R KEGG: bvi:Bcep1808_7355 hypothetical protein; XRE family transcriptional regulator complement(31235..31435) Burkholderia phytofirmans PsJN 6280604 YP_001893492.1 CDS Bphyt_7278 NC_010679.1 31521 31730 R hypothetical protein complement(31521..31730) Burkholderia phytofirmans PsJN 6280605 YP_001893493.1 CDS Bphyt_7279 NC_010679.1 31778 31987 R hypothetical protein complement(31778..31987) Burkholderia phytofirmans PsJN 6280688 YP_001893494.1 CDS Bphyt_7280 NC_010679.1 32052 32171 R hypothetical protein complement(32052..32171) Burkholderia phytofirmans PsJN 6280689 YP_001893495.1 CDS Bphyt_7281 NC_010679.1 32185 32595 R KEGG: bvi:Bcep1808_7521 hypothetical protein; hypothetical protein complement(32185..32595) Burkholderia phytofirmans PsJN 6280690 YP_001893496.1 CDS Bphyt_7282 NC_010679.1 32661 32903 R KEGG: bvi:Bcep1808_6872 hypothetical protein; hypothetical protein complement(32661..32903) Burkholderia phytofirmans PsJN 6280691 YP_001893497.1 CDS Bphyt_7283 NC_010679.1 32914 33042 R hypothetical protein complement(32914..33042) Burkholderia phytofirmans PsJN 6280692 YP_001893498.1 CDS Bphyt_7284 NC_010679.1 33055 33375 R KEGG: bvi:Bcep1808_7425 hypothetical protein; hypothetical protein complement(33055..33375) Burkholderia phytofirmans PsJN 6280587 YP_001893499.1 CDS Bphyt_7285 NC_010679.1 33439 33981 R hypothetical protein complement(33439..33981) Burkholderia phytofirmans PsJN 6280588 YP_001893500.1 CDS Bphyt_7286 NC_010679.1 33974 34252 R KEGG: ypi:YpsIP31758_B0042 hypothetical protein; hypothetical protein complement(33974..34252) Burkholderia phytofirmans PsJN 6280589 YP_001893501.1 CDS Bphyt_7287 NC_010679.1 34290 34607 R KEGG: net:Neut_0108 hypothetical protein; hypothetical protein complement(34290..34607) Burkholderia phytofirmans PsJN 6280590 YP_001893502.1 CDS Bphyt_7288 NC_010679.1 34722 35090 D hypothetical protein 34722..35090 Burkholderia phytofirmans PsJN 6280704 YP_001893503.1 CDS Bphyt_7289 NC_010679.1 35087 35560 D KEGG: bmu:Bmul_3856 hypothetical protein; hypothetical protein 35087..35560 Burkholderia phytofirmans PsJN 6280705 YP_001893504.1 CDS Bphyt_7290 NC_010679.1 35605 36024 R hypothetical protein complement(35605..36024) Burkholderia phytofirmans PsJN 6280706 YP_001893505.1 CDS Bphyt_7291 NC_010679.1 36028 36657 R KEGG: ypi:YpsIP31758_A0045 hypothetical protein; hypothetical protein complement(36028..36657) Burkholderia phytofirmans PsJN 6280707 YP_001893506.1 CDS Bphyt_7292 NC_010679.1 36654 36911 R KEGG: gox:GOX2733 hypothetical protein; hypothetical protein complement(36654..36911) Burkholderia phytofirmans PsJN 6280708 YP_001893507.1 CDS Bphyt_7293 NC_010679.1 36932 37393 R KEGG: bmu:Bmul_6213 hypothetical protein; hypothetical protein complement(36932..37393) Burkholderia phytofirmans PsJN 6280630 YP_001893508.1 CDS Bphyt_7294 NC_010679.1 37402 37695 R KEGG: bvi:Bcep1808_6716 hypothetical protein; hypothetical protein complement(37402..37695) Burkholderia phytofirmans PsJN 6280631 YP_001893509.1 CDS Bphyt_7295 NC_010679.1 37705 38094 R hypothetical protein complement(37705..38094) Burkholderia phytofirmans PsJN 6280632 YP_001893510.1 CDS Bphyt_7296 NC_010679.1 38102 38296 R KEGG: vei:Veis_4015 hypothetical protein; hypothetical protein complement(38102..38296) Burkholderia phytofirmans PsJN 6280633 YP_001893511.1 CDS Bphyt_7297 NC_010679.1 38296 38571 R KEGG: mpt:Mpe_A1531 hypothetical protein; hypothetical protein complement(38296..38571) Burkholderia phytofirmans PsJN 6280722 YP_001893512.1 CDS Bphyt_7298 NC_010679.1 38866 40512 D KEGG: ecv:APECO1_O1R217 DNA restriction methylase; DNA restriction methylase 38866..40512 Burkholderia phytofirmans PsJN 6280723 YP_001893513.1 CDS Bphyt_7299 NC_010679.1 40568 40915 R KEGG: bvi:Bcep1808_7627 hypothetical protein; hypothetical protein complement(40568..40915) Burkholderia phytofirmans PsJN 6280724 YP_001893514.1 CDS Bphyt_7300 NC_010679.1 40912 41403 R KEGG: bvi:Bcep1808_7626 hypothetical protein; hypothetical protein complement(40912..41403) Burkholderia phytofirmans PsJN 6280725 YP_001893515.1 CDS Bphyt_7301 NC_010679.1 41832 42038 D hypothetical protein 41832..42038 Burkholderia phytofirmans PsJN 6280726 YP_001893516.1 CDS Bphyt_7302 NC_010679.1 42058 42396 D hypothetical protein 42058..42396 Burkholderia phytofirmans PsJN 6280650 YP_001893517.1 CDS Bphyt_7303 NC_010679.1 42411 42680 D hypothetical protein 42411..42680 Burkholderia phytofirmans PsJN 6280651 YP_001893518.1 CDS Bphyt_7304 NC_010679.1 42735 43067 D hypothetical protein 42735..43067 Burkholderia phytofirmans PsJN 6280652 YP_001893519.1 CDS Bphyt_7305 NC_010679.1 43108 43332 D hypothetical protein 43108..43332 Burkholderia phytofirmans PsJN 6280653 YP_001893520.1 CDS Bphyt_7306 NC_010679.1 43776 44009 D hypothetical protein 43776..44009 Burkholderia phytofirmans PsJN 6280654 YP_001893521.1 CDS Bphyt_7307 NC_010679.1 44254 44436 D hypothetical protein 44254..44436 Burkholderia phytofirmans PsJN 6280634 YP_001893522.1 CDS Bphyt_7308 NC_010679.1 44481 44810 D KEGG: aby:ABAYE3565 hypothetical protein; hypothetical protein 44481..44810 Burkholderia phytofirmans PsJN 6280635 YP_001893523.1 CDS Bphyt_7309 NC_010679.1 44853 44996 D hypothetical protein 44853..44996 Burkholderia phytofirmans PsJN 6280636 YP_001893524.1 CDS Bphyt_7310 NC_010679.1 45416 45631 D hypothetical protein 45416..45631 Burkholderia phytofirmans PsJN 6280637 YP_001893525.1 CDS Bphyt_7311 NC_010679.1 45705 46664 D KEGG: bvi:Bcep1808_7720 hypothetical protein; hypothetical protein 45705..46664 Burkholderia phytofirmans PsJN 6280669 YP_001893526.1 CDS Bphyt_7312 NC_010679.1 46724 46978 D hypothetical protein 46724..46978 Burkholderia phytofirmans PsJN 6280670 YP_001893527.1 CDS Bphyt_7313 NC_010679.1 47493 47726 D hypothetical protein 47493..47726 Burkholderia phytofirmans PsJN 6280671 YP_001893528.1 CDS Bphyt_7314 NC_010679.1 47732 47947 D hypothetical protein 47732..47947 Burkholderia phytofirmans PsJN 6280672 YP_001893529.1 CDS Bphyt_7315 NC_010679.1 48026 48514 D KEGG: pol:Bpro_5058 hypothetical protein; hypothetical protein 48026..48514 Burkholderia phytofirmans PsJN 6280673 YP_001893530.1 CDS Bphyt_7316 NC_010679.1 48825 49037 D hypothetical protein 48825..49037 Burkholderia phytofirmans PsJN 6280698 YP_001893531.1 CDS Bphyt_7317 NC_010679.1 49030 49224 D hypothetical protein 49030..49224 Burkholderia phytofirmans PsJN 6280699 YP_001893532.1 CDS Bphyt_7318 NC_010679.1 49262 49411 D hypothetical protein 49262..49411 Burkholderia phytofirmans PsJN 6280700 YP_001893533.1 CDS Bphyt_7319 NC_010679.1 50077 50421 D hypothetical protein 50077..50421 Burkholderia phytofirmans PsJN 6280701 YP_001893534.1 CDS Bphyt_7320 NC_010679.1 50440 50697 D hypothetical protein 50440..50697 Burkholderia phytofirmans PsJN 6280663 YP_001893535.1 CDS Bphyt_7321 NC_010679.1 50732 51109 D hypothetical protein 50732..51109 Burkholderia phytofirmans PsJN 6280664 YP_001893536.1 CDS Bphyt_7322 NC_010679.1 51114 51710 D KEGG: bvi:Bcep1808_6860 hypothetical protein; hypothetical protein 51114..51710 Burkholderia phytofirmans PsJN 6280665 YP_001893537.1 CDS Bphyt_7323 NC_010679.1 52409 52783 D PFAM: protein of unknown function DUF932; KEGG: bvi:Bcep1808_5806 protein of unknown function DUF932; hypothetical protein 52409..52783 Burkholderia phytofirmans PsJN 6280666 YP_001893538.1 CDS Bphyt_7324 NC_010679.1 52823 54271 D PFAM: integrase family protein; KEGG: xac:XAC3932 integrase/recombinase; integrase family protein 52823..54271 Burkholderia phytofirmans PsJN 6280667 YP_001893539.1 CDS Bphyt_7325 NC_010679.1 54268 56151 D PFAM: integrase family protein; KEGG: psa:PST_0586 hypothetical protein; integrase family protein 54268..56151 Burkholderia phytofirmans PsJN 6280582 YP_001893540.1 CDS Bphyt_7326 NC_010679.1 56148 58031 D PFAM: integrase family protein; KEGG: psa:PST_0587 site-specific recombinase, phage integrase family; integrase family protein 56148..58031 Burkholderia phytofirmans PsJN 6280583 YP_001893541.1 CDS Bphyt_7327 NC_010679.1 58028 58390 D hypothetical protein 58028..58390 Burkholderia phytofirmans PsJN 6280584 YP_001893542.1 CDS Bphyt_7328 NC_010679.1 58443 59036 D PFAM: protein of unknown function DUF932; KEGG: bxe:Bxe_A1782 putative F plasmid gene 32-like protein; hypothetical protein 58443..59036 Burkholderia phytofirmans PsJN 6280585 YP_001893543.1 CDS Bphyt_7329 NC_010679.1 59088 59288 D hypothetical protein 59088..59288 Burkholderia phytofirmans PsJN 6280586 YP_001893544.1 CDS Bphyt_7330 NC_010679.1 59266 59538 D hypothetical protein 59266..59538 Burkholderia phytofirmans PsJN 6280564 YP_001893545.1 CDS Bphyt_7331 NC_010679.1 59528 59788 D hypothetical protein 59528..59788 Burkholderia phytofirmans PsJN 6280565 YP_001893546.1 CDS Bphyt_7332 NC_010679.1 60480 60860 D KEGG: mkm:Mkms_5516 hypothetical protein; hypothetical protein 60480..60860 Burkholderia phytofirmans PsJN 6280566 YP_001893547.1 CDS Bphyt_7333 NC_010679.1 60909 61121 D KEGG: bmu:Bmul_0076 hypothetical protein; hypothetical protein 60909..61121 Burkholderia phytofirmans PsJN 6280567 YP_001893548.1 CDS Bphyt_7334 NC_010679.1 61140 61418 D KEGG: bmu:Bmul_6199 hypothetical protein; hypothetical protein 61140..61418 Burkholderia phytofirmans PsJN 6280674 YP_001893549.1 CDS Bphyt_7335 NC_010679.1 61578 61940 D hypothetical protein 61578..61940 Burkholderia phytofirmans PsJN 6280675 YP_001893550.1 CDS Bphyt_7336 NC_010679.1 62061 62321 D hypothetical protein 62061..62321 Burkholderia phytofirmans PsJN 6280676 YP_001893551.1 CDS Bphyt_7337 NC_010679.1 62684 63091 R hypothetical protein complement(62684..63091) Burkholderia phytofirmans PsJN 6280677 YP_001893552.1 CDS Bphyt_7338 NC_010679.1 63088 63843 R KEGG: xfa:XFa0050 hypothetical protein; hypothetical protein complement(63088..63843) Burkholderia phytofirmans PsJN 6280678 YP_001893553.1 CDS Bphyt_7339 NC_010679.1 64283 64789 D hypothetical protein 64283..64789 Burkholderia phytofirmans PsJN 6280625 YP_001893554.1 CDS Bphyt_7340 NC_010679.1 64812 65195 D hypothetical protein 64812..65195 Burkholderia phytofirmans PsJN 6280626 YP_001893555.1 CDS Bphyt_7341 NC_010679.1 65197 66885 D KEGG: bpt:Bpet3719 type IV secretion system protein VirD4; type IV secretion system protein VirD4 65197..66885 Burkholderia phytofirmans PsJN 6280627 YP_001893556.1 CDS Bphyt_7342 NC_010679.1 66891 71351 D TIGRFAM: conjugative relaxase domain protein; PFAM: TrwC relaxase; KEGG: xac:XACb0031 TrwC protein; conjugative relaxase domain-containing protein 66891..71351 Burkholderia phytofirmans PsJN 6280628 YP_001893557.1 CDS Bphyt_7343 NC_010679.1 71459 72151 D KEGG: nha:Nham_4449 hypothetical protein; hypothetical protein 71459..72151 Burkholderia phytofirmans PsJN 6280629 YP_001893558.1 CDS Bphyt_7344 NC_010679.1 72159 72971 D PFAM: Lytic transglycosylase catalytic; KEGG: bcm:Bcenmc03_5443 lytic transglycosylase catalytic; lytic transglycosylase 72159..72971 Burkholderia phytofirmans PsJN 6280679 YP_001893559.1 CDS Bphyt_7345 NC_010679.1 73390 73812 D hypothetical protein 73390..73812 Burkholderia phytofirmans PsJN 6280680 YP_001893560.1 CDS Bphyt_7346 NC_010679.1 73817 74152 D hypothetical protein 73817..74152 Burkholderia phytofirmans PsJN 6280681 YP_001893561.1 CDS Bphyt_7347 NC_010679.1 74136 76685 D PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: bbt:BBta_p0255 type IV secretory pathway AvhB4 protein; CagE TrbE VirB component of type IV transporter system 74136..76685 Burkholderia phytofirmans PsJN 6280682 YP_001893562.1 CDS Bphyt_7348 NC_010679.1 76688 77392 D PFAM: type IV secretion system family protein; KEGG: bxe:Bxe_A2653 putative type IV secretion system protein VirB5/TraF; type IV secretion system family protein 76688..77392 Burkholderia phytofirmans PsJN 6280693 YP_001893563.1 CDS Bphyt_7349 NC_010679.1 77470 78468 D PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: vei:Veis_5024 TrbL/VirB6 plasmid conjugal transfer protein; TrbL/VirB6 plasmid conjugal transfer protein 77470..78468 Burkholderia phytofirmans PsJN 6280694 YP_001893564.1 CDS Bphyt_7350 NC_010679.1 78670 79569 D KEGG: xau:Xaut_5081 VirB8 family protein; Type IV secretory pathway component VirB8 protein-like protein 78670..79569 Burkholderia phytofirmans PsJN 6280695 YP_001893565.1 CDS Bphyt_7351 NC_010679.1 79566 80474 D PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: xfa:XFa0013 conjugal transfer protein; conjugal transfer protein TrbG 79566..80474 Burkholderia phytofirmans PsJN 6280696 YP_001893566.1 CDS Bphyt_7352 NC_010679.1 80471 81769 D PFAM: conjugation TrbI family protein; KEGG: bxe:Bxe_C0455 putative type IV secretion system protein VirB10; conjugation TrbI family protein 80471..81769 Burkholderia phytofirmans PsJN 6280697 YP_001893567.1 CDS Bphyt_7353 NC_010679.1 81766 82941 D PFAM: type II secretion system protein E; KEGG: btr:Btr_2345 VblB11 protein; type II secretion system protein E 81766..82941 Burkholderia phytofirmans PsJN 6280717 YP_001893568.1 CDS Bphyt_7354 NC_010679.1 83097 84278 D KEGG: rno:84390 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1; hypothetical protein 83097..84278 Burkholderia phytofirmans PsJN 6280718 YP_001893569.1 CDS Bphyt_7355 NC_010679.1 84480 84875 D KEGG: noc:Noc_0626 hypothetical protein; hypothetical protein 84480..84875 Burkholderia phytofirmans PsJN 6280719 YP_001893570.1 CDS Bphyt_7356 NC_010679.1 84889 85194 D hypothetical protein 84889..85194 Burkholderia phytofirmans PsJN 6280720 YP_001893571.1 CDS Bphyt_7357 NC_010679.1 85222 85881 D KEGG: ajs:Ajs_4213 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases like enzyme; hypothetical protein 85222..85881 Burkholderia phytofirmans PsJN 6280721 YP_001893572.1 CDS Bphyt_7358 NC_010679.1 85881 87089 D PFAM: integrase family protein; KEGG: rme:Rmet_6252 phage integrase-like SAM-like; integrase family protein 85881..87089 Burkholderia phytofirmans PsJN 6280568 YP_001893573.1 CDS Bphyt_7359 NC_010679.1 87086 88825 D KEGG: rme:Rmet_6253 phage integrase; phage integrase 87086..88825 Burkholderia phytofirmans PsJN 6280569 YP_001893574.1 CDS Bphyt_7360 NC_010679.1 88818 90884 D KEGG: rme:Rmet_6254 phage integrase; phage integrase 88818..90884 Burkholderia phytofirmans PsJN 6280570 YP_001893575.1 CDS Bphyt_7361 NC_010679.1 90881 91273 D KEGG: sfr:Sfri_3480 TetR family transcriptional regulator-like protein; TetR family transcriptional regulator-like protein 90881..91273 Burkholderia phytofirmans PsJN 6280571 YP_001893576.1 CDS Bphyt_7362 NC_010679.1 91270 91524 D hypothetical protein 91270..91524 Burkholderia phytofirmans PsJN 6280577 YP_001893577.1 CDS Bphyt_7363 NC_010679.1 91609 91920 D KEGG: net:Neut_2619 hypothetical protein; hypothetical protein 91609..91920 Burkholderia phytofirmans PsJN 6280578 YP_001893578.1 CDS Bphyt_7364 NC_010679.1 92004 93197 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: xau:Xaut_0805 integrase domain protein SAM domain protein; integrase domain-containing protein SAM domain-containing protein 92004..93197 Burkholderia phytofirmans PsJN 6280579 YP_001893579.1 CDS Bphyt_7365 NC_010679.1 93194 94993 D KEGG: xau:Xaut_4985 hypothetical protein; hypothetical protein 93194..94993 Burkholderia phytofirmans PsJN 6280580 YP_001893580.1 CDS Bphyt_7366 NC_010679.1 94993 96930 D PFAM: integrase family protein; KEGG: mes:Meso_4142 hypothetical protein; integrase family protein 94993..96930 Burkholderia phytofirmans PsJN 6280581 YP_001893581.1 CDS Bphyt_7367 NC_010679.1 96920 97381 D hypothetical protein 96920..97381 Burkholderia phytofirmans PsJN 6280655 YP_001893582.1 CDS Bphyt_7368 NC_010679.1 97467 97625 D KEGG: bam:Bamb_1481 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes-like protein; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein 97467..97625 Burkholderia phytofirmans PsJN 6280656 YP_001893583.1 CDS Bphyt_7369 NC_010679.1 97656 98369 D KEGG: bvi:Bcep1808_6926 hypothetical protein; hypothetical protein 97656..98369 Burkholderia phytofirmans PsJN 6280657 YP_001893584.1 CDS Bphyt_7370 NC_010679.1 98741 99286 D hypothetical protein 98741..99286 Burkholderia phytofirmans PsJN 6280658 YP_001893585.1 CDS Bphyt_7371 NC_010679.1 99315 99608 D hypothetical protein 99315..99608 Burkholderia phytofirmans PsJN 6280591 YP_001893586.1 CDS Bphyt_7372 NC_010679.1 99628 99933 D hypothetical protein 99628..99933 Burkholderia phytofirmans PsJN 6280592 YP_001893587.1 CDS Bphyt_7373 NC_010679.1 99914 100231 D KEGG: bmu:Bmul_5657 hypothetical protein; hypothetical protein 99914..100231 Burkholderia phytofirmans PsJN 6280593 YP_001893588.1 CDS Bphyt_7374 NC_010679.1 100228 100998 D KEGG: rfe:RF_0786 possible DNA primase; hypothetical protein 100228..100998 Burkholderia phytofirmans PsJN 6280594 YP_001893589.1 CDS Bphyt_7375 NC_010679.1 101072 101320 D KEGG: bmu:Bmul_6183 hypothetical protein; hypothetical protein 101072..101320 Burkholderia phytofirmans PsJN 6280595 YP_001893590.1 CDS Bphyt_7376 NC_010679.1 101360 102559 D hypothetical protein 101360..102559 Burkholderia phytofirmans PsJN 6280611 YP_001893591.1 CDS Bphyt_7377 NC_010679.1 102560 102778 D hypothetical protein 102560..102778 Burkholderia phytofirmans PsJN 6280612 YP_001893592.1 CDS Bphyt_7378 NC_010679.1 102791 103294 D KEGG: tcr:509807.20 hypothetical protein Pfam: SURF6 WD40 COX2 PROSITE: WD_REPEATS_1 ARG_RICH GLU_RICH; hypothetical protein 102791..103294 Burkholderia phytofirmans PsJN 6280613 YP_001893593.1 CDS Bphyt_7379 NC_010679.1 103353 103673 D PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bcm:Bcenmc03_6525 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 103353..103673 Burkholderia phytofirmans PsJN 6280614 YP_001893594.1 CDS Bphyt_7380 NC_010679.1 103706 103918 D hypothetical protein 103706..103918 Burkholderia phytofirmans PsJN 6280615 YP_001893595.1 CDS Bphyt_7381 NC_010679.1 103926 104846 D KEGG: rme:Rmet_6269 hypothetical protein; hypothetical protein 103926..104846 Burkholderia phytofirmans PsJN 6280642 YP_001893596.1 CDS Bphyt_7382 NC_010679.1 105113 105775 D KEGG: xcv:XCV2272 putative secreted protein; hypothetical protein 105113..105775 Burkholderia phytofirmans PsJN 6280643 YP_001893597.1 CDS Bphyt_7383 NC_010679.1 105900 106565 D KEGG: bvi:Bcep1808_6865 hypothetical protein; hypothetical protein 105900..106565 Burkholderia phytofirmans PsJN 6280644 YP_001893598.1 CDS Bphyt_7384 NC_010679.1 106631 107155 D KEGG: bch:Bcen2424_6822 hypothetical protein; hypothetical protein 106631..107155 Burkholderia phytofirmans PsJN 6280645 YP_001893599.1 CDS Bphyt_7385 NC_010679.1 107172 107444 D hypothetical protein 107172..107444 Burkholderia phytofirmans PsJN 6280572 YP_001893600.1 CDS Bphyt_7386 NC_010679.1 107603 108064 D KEGG: gdi:GDI2240 putative peptidase protein; peptidase protein 107603..108064 Burkholderia phytofirmans PsJN 6280573 YP_001893601.1 CDS Bphyt_7387 NC_010679.1 108102 108377 D hypothetical protein 108102..108377 Burkholderia phytofirmans PsJN 6280574 YP_001893602.1 CDS Bphyt_7388 NC_010679.1 108483 108689 D hypothetical protein 108483..108689 Burkholderia phytofirmans PsJN 6280575 YP_001893603.1 CDS Bphyt_7389 NC_010679.1 108965 109333 D hypothetical protein 108965..109333 Burkholderia phytofirmans PsJN 6280576 YP_001893604.1 CDS Bphyt_7390 NC_010679.1 109457 109753 D hypothetical protein 109457..109753 Burkholderia phytofirmans PsJN 6280596 YP_001893605.1 CDS Bphyt_7391 NC_010679.1 109961 110335 D KEGG: bmu:Bmul_6185 hypothetical protein; hypothetical protein 109961..110335 Burkholderia phytofirmans PsJN 6280597 YP_001893606.1 CDS Bphyt_7392 NC_010679.1 110519 110869 D hypothetical protein 110519..110869 Burkholderia phytofirmans PsJN 6280598 YP_001893607.1 CDS Bphyt_7393 NC_010679.1 110943 111149 D KEGG: bvi:Bcep1808_7693 hypothetical protein; hypothetical protein 110943..111149 Burkholderia phytofirmans PsJN 6280599 YP_001893608.1 CDS Bphyt_7394 NC_010679.1 111168 111620 D KEGG: bvi:Bcep1808_6857 hypothetical protein; hypothetical protein 111168..111620 Burkholderia phytofirmans PsJN 6280600 YP_001893609.1 CDS Bphyt_7395 NC_010679.1 111682 111972 D hypothetical protein 111682..111972 Burkholderia phytofirmans PsJN 6280638 YP_001893610.1 CDS Bphyt_7396 NC_010679.1 112023 112214 D hypothetical protein 112023..112214 Burkholderia phytofirmans PsJN 6280639 YP_001893611.1 CDS Bphyt_7397 NC_010679.1 112211 112597 D PFAM: Resolvase helix-turn-helix domain protein; KEGG: llm:llmg_0711 DNA-invertase/resolvase; Resolvase helix-turn-helix domain-containing protein 112211..112597 Burkholderia phytofirmans PsJN 6280640 YP_001893612.1 CDS Bphyt_7398 NC_010679.1 112732 113697 D KEGG: bvi:Bcep1808_7584 hypothetical protein; hypothetical protein 112732..113697 Burkholderia phytofirmans PsJN 6280641 YP_001893613.1 CDS Bphyt_7399 NC_010679.1 114899 115654 D KEGG: aav:Aave_2747 zinc metalloproteinase Mpr protein; zinc metalloproteinase Mpr protein 114899..115654 Burkholderia phytofirmans PsJN 6280616 YP_001893614.1 CDS Bphyt_7400 NC_010679.1 115707 115979 D hypothetical protein 115707..115979 Burkholderia phytofirmans PsJN 6280617 YP_001893615.1 CDS Bphyt_7401 NC_010679.1 115976 116476 D hypothetical protein 115976..116476 Burkholderia phytofirmans PsJN 6280618 YP_001893616.1 CDS Bphyt_7402 NC_010679.1 116476 116670 D hypothetical protein 116476..116670 Burkholderia phytofirmans PsJN 6280619 YP_001893617.1 CDS Bphyt_7403 NC_010679.1 116680 116970 D PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_A4321 putative HNS-like transcriptional regulator; histone family protein nucleoid-structuring protein H-NS 116680..116970 Burkholderia phytofirmans PsJN 6280620 YP_001893618.1 CDS Bphyt_7404 NC_010679.1 117158 117781 D KEGG: ajs:Ajs_4222 hypothetical protein; hypothetical protein 117158..117781 Burkholderia phytofirmans PsJN 6280621 YP_001893619.1 CDS Bphyt_7405 NC_010679.1 117828 118277 D hypothetical protein 117828..118277 Burkholderia phytofirmans PsJN 6280622 YP_001893620.1 CDS Bphyt_7406 NC_010679.1 118412 119104 R hypothetical protein complement(118412..119104) Burkholderia phytofirmans PsJN 6280623 YP_001893621.1 CDS Bphyt_7407 NC_010679.1 119156 119533 R hypothetical protein complement(119156..119533) Burkholderia phytofirmans PsJN 6280624 YP_001893622.1 CDS Bphyt_7408 NC_010679.1 119587 120114 R hypothetical protein complement(119587..120114) Burkholderia phytofirmans PsJN 6280702 YP_001893623.1 CDS Bphyt_7409 NC_010679.1 120147 120827 R PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_7061 lytic transglycosylase, catalytic; lytic transglycosylase complement(120147..120827) Burkholderia phytofirmans PsJN 6280703 YP_001893678.1 CDS dnaA NC_010681.1 299 1936 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 299..1936 Burkholderia phytofirmans PsJN 6282732 YP_001893679.1 CDS Bphyt_0002 NC_010681.1 2157 3260 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2157..3260 Burkholderia phytofirmans PsJN 6283580 YP_001893680.1 CDS gyrB NC_010681.1 3375 5846 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 3375..5846 Burkholderia phytofirmans PsJN 6283581 YP_001893681.1 CDS Bphyt_0004 NC_010681.1 5901 6305 D PFAM: PAAR repeat-containing protein; KEGG: bcm:Bcenmc03_4517 PaaR repeat-containing protein; PAAR repeat-containing protein 5901..6305 Burkholderia phytofirmans PsJN 6283582 YP_001893682.1 CDS Bphyt_0006 NC_010681.1 7686 10244 D TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bmu:Bmul_0352 type VI secretion system Vgr family protein; ImpA family type VI secretion-associated protein 7686..10244 Burkholderia phytofirmans PsJN 6280753 YP_001893683.1 CDS Bphyt_0007 NC_010681.1 10252 11259 D KEGG: bvi:Bcep1808_1194 hypothetical protein; hypothetical protein 10252..11259 Burkholderia phytofirmans PsJN 6280754 YP_001893684.1 CDS Bphyt_0008 NC_010681.1 11305 14187 D KEGG: bvi:Bcep1808_1196 hypothetical protein; hypothetical protein 11305..14187 Burkholderia phytofirmans PsJN 6280755 YP_001893685.1 CDS Bphyt_0009 NC_010681.1 14184 14939 D KEGG: bvi:Bcep1808_1197 hypothetical protein; hypothetical protein 14184..14939 Burkholderia phytofirmans PsJN 6280756 YP_001893686.1 CDS Bphyt_0010 NC_010681.1 14958 15692 D KEGG: bvi:Bcep1808_1197 hypothetical protein; hypothetical protein 14958..15692 Burkholderia phytofirmans PsJN 6280757 YP_001893687.1 CDS Bphyt_0011 NC_010681.1 15765 16016 D PFAM: PAAR repeat-containing protein; KEGG: bvi:Bcep1808_1198 PaaR repeat-containing protein; PAAR repeat-containing protein 15765..16016 Burkholderia phytofirmans PsJN 6280758 YP_001893688.1 CDS Bphyt_0012 NC_010681.1 16121 18958 D KEGG: bte:BTH_I2691 hypothetical protein; hypothetical protein 16121..18958 Burkholderia phytofirmans PsJN 6282545 YP_001893689.1 CDS Bphyt_0013 NC_010681.1 18955 19692 D KEGG: bvi:Bcep1808_1197 hypothetical protein; hypothetical protein 18955..19692 Burkholderia phytofirmans PsJN 6282546 YP_001893690.1 CDS Bphyt_0014 NC_010681.1 19944 21122 R KEGG: sat:SYN_01816 hypothetical cytosolic protein; hypothetical protein complement(19944..21122) Burkholderia phytofirmans PsJN 6282547 YP_001893691.1 CDS Bphyt_0015 NC_010681.1 21119 24493 R KEGG: sat:SYN_01817 hypothetical cytosolic protein; hypothetical protein complement(21119..24493) Burkholderia phytofirmans PsJN 6282548 YP_001893692.1 CDS Bphyt_0016 NC_010681.1 24486 25133 R KEGG: pca:Pcar_1810 hypothetical protein; hypothetical protein complement(24486..25133) Burkholderia phytofirmans PsJN 6282549 YP_001893693.1 CDS Bphyt_0017 NC_010681.1 25136 26590 R KEGG: pca:Pcar_1811 hypothetical protein; hypothetical protein complement(25136..26590) Burkholderia phytofirmans PsJN 6282550 YP_001893694.1 CDS Bphyt_0018 NC_010681.1 26795 28150 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: bch:Bcen2424_6108 hypothetical protein; RNA-directed DNA polymerase complement(26795..28150) Burkholderia phytofirmans PsJN 6282551 YP_001893695.1 CDS Bphyt_0019 NC_010681.1 28838 29782 R PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: rle:RL2634 AraC family transcriptional regulator; AraC family transcriptional regulator complement(28838..29782) Burkholderia phytofirmans PsJN 6282552 YP_001893696.1 CDS Bphyt_0020 NC_010681.1 29985 31388 D TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: bxe:Bxe_A4445 ethanolamine transporter EAT family, APC superfamily; ethanolamine transporter 29985..31388 Burkholderia phytofirmans PsJN 6282853 YP_001893697.1 CDS Bphyt_0021 NC_010681.1 31432 32826 D PFAM: ethanolamine ammonia lyase large subunit; KEGG: bxe:Bxe_A4444 ethanolamine ammonia lyase large subunit; ethanolamine ammonia lyase large subunit 31432..32826 Burkholderia phytofirmans PsJN 6282854 YP_001893698.1 CDS Bphyt_0022 NC_010681.1 32823 33620 D catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 32823..33620 Burkholderia phytofirmans PsJN 6282855 YP_001893699.1 CDS Bphyt_0023 NC_010681.1 33626 34021 R PFAM: protein of unknown function DUF779; KEGG: bxe:Bxe_A4442 hypothetical protein; hypothetical protein complement(33626..34021) Burkholderia phytofirmans PsJN 6282856 YP_001893700.1 CDS Bphyt_0024 NC_010681.1 34086 35606 R PFAM: aldehyde dehydrogenase_; KEGG: bxe:Bxe_A4441 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase complement(34086..35606) Burkholderia phytofirmans PsJN 6282857 YP_001893701.1 CDS Bphyt_0025 NC_010681.1 35941 36990 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A4440 AraC family transcriptional regulator; AraC family transcriptional regulator 35941..36990 Burkholderia phytofirmans PsJN 6282858 YP_001893702.1 CDS Bphyt_0026 NC_010681.1 37034 39139 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: haloacid dehalogenase; E1-E2 ATPase-associated domain protein; KEGG: bxe:Bxe_A4439 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; ATPase P complement(37034..39139) Burkholderia phytofirmans PsJN 6282859 YP_001893703.1 CDS Bphyt_0027 NC_010681.1 39233 39436 D hypothetical protein 39233..39436 Burkholderia phytofirmans PsJN 6282860 YP_001893704.1 CDS Bphyt_0028 NC_010681.1 39486 39917 D TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; KEGG: bxe:Bxe_A4438 MerR family transcriptional regulator; MerR family transcriptional regulator 39486..39917 Burkholderia phytofirmans PsJN 6281788 YP_001893705.1 CDS Bphyt_0029 NC_010681.1 40032 40232 D KEGG: bxe:Bxe_A4437 hypothetical protein; hypothetical protein 40032..40232 Burkholderia phytofirmans PsJN 6281789 YP_001893706.1 CDS Bphyt_0030 NC_010681.1 40276 41679 D exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 40276..41679 Burkholderia phytofirmans PsJN 6281790 YP_001893707.1 CDS Bphyt_0031 NC_010681.1 41982 43136 D catalyzes the transfer of an amino moiety; aminotransferase 41982..43136 Burkholderia phytofirmans PsJN 6281791 YP_001893708.1 CDS Bphyt_0032 NC_010681.1 43261 44049 D PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A4434 ABC amino acid transporter periplasmic ligand binding protein; family 3 extracellular solute-binding protein 43261..44049 Burkholderia phytofirmans PsJN 6281792 YP_001893709.1 CDS Bphyt_0033 NC_010681.1 44181 45026 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bte:BTH_II1688 AraC family transcriptional regulator; AraC family transcriptional regulator 44181..45026 Burkholderia phytofirmans PsJN 6281793 YP_001893710.1 CDS Bphyt_0034 NC_010681.1 45049 45636 R PFAM: lysine exporter (LYSE/YGGA); KEGG: spe:Spro_1384 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA complement(45049..45636) Burkholderia phytofirmans PsJN 6281794 YP_001893711.1 CDS Bphyt_0037 NC_010681.1 48397 48915 R KEGG: mmw:Mmwyl1_1944 hypothetical protein; hypothetical protein complement(48397..48915) Burkholderia phytofirmans PsJN 6283989 YP_001893712.1 CDS Bphyt_0038 NC_010681.1 48923 50146 R PFAM: major facilitator superfamily MFS_1; KEGG: mmw:Mmwyl1_1945 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(48923..50146) Burkholderia phytofirmans PsJN 6283990 YP_001893713.1 CDS Bphyt_0039 NC_010681.1 50143 51210 R KEGG: rso:RSc0206 hypothetical signal peptide protein; hypothetical protein complement(50143..51210) Burkholderia phytofirmans PsJN 6283991 YP_001893714.1 CDS Bphyt_0040 NC_010681.1 51437 52348 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xfa:XF1752 transcriptional regulator (LysR family); LysR family transcriptional regulator 51437..52348 Burkholderia phytofirmans PsJN 6283992 YP_001893715.1 CDS Bphyt_0041 NC_010681.1 53101 54552 D PFAM: amidase; KEGG: pst:PSPTO_3192 amidase family protein; amidase 53101..54552 Burkholderia phytofirmans PsJN 6283773 YP_001893716.1 CDS Bphyt_0042 NC_010681.1 54738 55496 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: pst:PSPTO_3191 DeoR family transcriptional regulator; DeoR family transcriptional regulator 54738..55496 Burkholderia phytofirmans PsJN 6283774 YP_001893717.1 CDS Bphyt_0043 NC_010681.1 55474 56766 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 55474..56766 Burkholderia phytofirmans PsJN 6283775 YP_001893718.1 CDS Bphyt_0044 NC_010681.1 56777 57727 D PFAM: aminoglycoside phosphotransferase; KEGG: psb:Psyr_3055 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 56777..57727 Burkholderia phytofirmans PsJN 6283776 YP_001893719.1 CDS Bphyt_0045 NC_010681.1 57733 58674 D PFAM: choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: psb:Psyr_3054 choline/ethanolamine kinase:aminoglycoside phosphotransferase; choline/ethanolamine kinase 57733..58674 Burkholderia phytofirmans PsJN 6283777 YP_001893720.1 CDS Bphyt_0046 NC_010681.1 58832 59089 D KEGG: psb:Psyr_3053 hypothetical protein; hypothetical protein 58832..59089 Burkholderia phytofirmans PsJN 6283778 YP_001893721.1 CDS Bphyt_0047 NC_010681.1 59086 60612 D PFAM: Na+/solute symporter; KEGG: pst:PSPTO_3186 sodium:solute symporter family protein; Na+/solute symporter 59086..60612 Burkholderia phytofirmans PsJN 6283779 YP_001893722.1 CDS Bphyt_0048 NC_010681.1 60797 62173 D PFAM: aminotransferase class-III; KEGG: aci:ACIAD1452 aminotransferase; class III aminotransferase 60797..62173 Burkholderia phytofirmans PsJN 6284000 YP_001893723.1 CDS Bphyt_0049 NC_010681.1 62769 63911 D KEGG: bbt:BBta_2996 amidase expression-regulating protein; amidase 62769..63911 Burkholderia phytofirmans PsJN 6284001 YP_001893724.1 CDS Bphyt_0050 NC_010681.1 63908 64510 D PFAM: ANTAR domain protein; KEGG: bra:BRADO2658 hypothetical protein; response regulator receiver and ANTAR domain-containing protein 63908..64510 Burkholderia phytofirmans PsJN 6284002 YP_001893725.1 CDS Bphyt_0051 NC_010681.1 64702 65532 D PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mrd:Mrad2831_4421 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 64702..65532 Burkholderia phytofirmans PsJN 6284003 YP_001893726.1 CDS Bphyt_0052 NC_010681.1 65601 66764 D PFAM: extracellular ligand-binding receptor; KEGG: bra:BRADO2655 conserved hypothetical protein; signal peptide; extracellular ligand-binding receptor 65601..66764 Burkholderia phytofirmans PsJN 6284004 YP_001893727.1 CDS Bphyt_0053 NC_010681.1 66845 67681 D PFAM: inner-membrane translocator; KEGG: bcm:Bcenmc03_5901 inner-membrane translocator; inner-membrane translocator 66845..67681 Burkholderia phytofirmans PsJN 6284005 YP_001893728.1 CDS Bphyt_0054 NC_010681.1 67674 69488 D PFAM: inner-membrane translocator; ABC transporter related; SMART: ATPase AAA; KEGG: bcm:Bcenmc03_5902 ABC transporter; ABC transporter 67674..69488 Burkholderia phytofirmans PsJN 6283428 YP_001893729.1 CDS Bphyt_0055 NC_010681.1 69485 70186 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_C1307 ABC branched chain amino acid family transporter ATPase subunit; branched-chain ABC transporter ATPase 69485..70186 Burkholderia phytofirmans PsJN 6283429 YP_001893730.1 CDS Bphyt_0056 NC_010681.1 70224 70910 D KEGG: dra:DR_A0319 urease, beta/subunit gamma; TIGRFAM: urease subunit beta; urease, subunit gamma; PFAM: Urease subunit beta; Urease subunit gamma region; urease subunit beta 70224..70910 Burkholderia phytofirmans PsJN 6283430 YP_001893731.1 CDS ureC NC_010681.1 70913 72628 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 70913..72628 Burkholderia phytofirmans PsJN 6283431 YP_001893732.1 CDS Bphyt_0058 NC_010681.1 72638 73252 D TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: bbt:BBta_4441 urease accessory protein UreG; urease accessory protein UreG 72638..73252 Burkholderia phytofirmans PsJN 6283432 YP_001893733.1 CDS Bphyt_0059 NC_010681.1 73249 74064 D PFAM: Urease accessory protein UreD; KEGG: hma:pNG7127 urease accessory protein UreD; urease accessory protein UreD 73249..74064 Burkholderia phytofirmans PsJN 6283433 YP_001893734.1 CDS Bphyt_0060 NC_010681.1 74073 74594 D PFAM: urease accessory protein UreE; KEGG: hma:pNG7128 urease accessory protein UreE; urease accessory protein UreE 74073..74594 Burkholderia phytofirmans PsJN 6281513 YP_001893735.1 CDS Bphyt_0061 NC_010681.1 74587 75306 D PFAM: Urease accessory protein UreF; KEGG: mex:Mext_1195 urease accessory protein UreF; urease accessory protein UreF 74587..75306 Burkholderia phytofirmans PsJN 6281514 YP_001893736.1 CDS Bphyt_0062 NC_010681.1 75327 76892 D PFAM: extracellular solute-binding protein family 5; KEGG: msm:MSMEG_1084 peptide/opine/nickel uptake family protein ABC transporter periplasmic substrate-binding protein; family 5 extracellular solute-binding protein 75327..76892 Burkholderia phytofirmans PsJN 6281515 YP_001893737.1 CDS Bphyt_0063 NC_010681.1 77409 78440 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_03544 transcriptional regulator; LacI family transcriptional regulator complement(77409..78440) Burkholderia phytofirmans PsJN 6281516 YP_001893738.1 CDS Bphyt_0064 NC_010681.1 79164 79841 D PFAM: protein of unknown function DUF1028; KEGG: azc:AZC_0203 hypothetical protein; hypothetical protein 79164..79841 Burkholderia phytofirmans PsJN 6281517 YP_001893739.1 CDS Bphyt_0065 NC_010681.1 79951 81129 D PFAM: extracellular ligand-binding receptor; KEGG: bcm:Bcenmc03_4047 extracellular ligand-binding receptor; extracellular ligand-binding receptor 79951..81129 Burkholderia phytofirmans PsJN 6281518 YP_001893740.1 CDS Bphyt_0066 NC_010681.1 81567 82532 R KEGG: mul:MUL_4333 hypothetical protein; hypothetical protein complement(81567..82532) Burkholderia phytofirmans PsJN 6281519 YP_001893741.1 CDS Bphyt_0067 NC_010681.1 83504 84052 D PFAM: 4-vinyl reductase 4VR; KEGG: bxe:Bxe_B1583 hypothetical protein; 4-vinyl reductase 4VR 83504..84052 Burkholderia phytofirmans PsJN 6284339 YP_001893742.1 CDS Bphyt_0068 NC_010681.1 84101 85099 D PFAM: peptidase M19 renal dipeptidase; KEGG: cbd:COXBU7E912_0814 renal dipeptidase; peptidase M19 84101..85099 Burkholderia phytofirmans PsJN 6284340 YP_001893743.1 CDS Bphyt_0069 NC_010681.1 85116 85775 R PFAM: regulatory protein TetR; KEGG: dac:Daci_4797 TetR family transcriptional regulator; TetR family transcriptional regulator complement(85116..85775) Burkholderia phytofirmans PsJN 6284341 YP_001893744.1 CDS Bphyt_0070 NC_010681.1 85909 87195 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4332 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein 85909..87195 Burkholderia phytofirmans PsJN 6284342 YP_001893745.1 CDS Bphyt_0071 NC_010681.1 87469 88155 D hypothetical protein 87469..88155 Burkholderia phytofirmans PsJN 6284343 YP_001893746.1 CDS Bphyt_0072 NC_010681.1 89774 90931 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1114 outer membrane porin, OmpC family; porin 89774..90931 Burkholderia phytofirmans PsJN 6284344 YP_001893747.1 CDS Bphyt_0073 NC_010681.1 91180 92604 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bxe:Bxe_C1113 amine oxidase; amine oxidase 91180..92604 Burkholderia phytofirmans PsJN 6281101 YP_001893748.1 CDS Bphyt_0074 NC_010681.1 92781 93749 D PFAM: protein of unknown function DUF534; KEGG: bxe:Bxe_B1117 hypothetical protein; hypothetical protein 92781..93749 Burkholderia phytofirmans PsJN 6281102 YP_001893749.1 CDS Bphyt_0075 NC_010681.1 93734 94582 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_B1118 ABC transporter ATPase; ABC transporter 93734..94582 Burkholderia phytofirmans PsJN 6281103 YP_001893750.1 CDS Bphyt_0076 NC_010681.1 94579 95499 D PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C1110 ABC transporter inner membrane subunit; inner-membrane translocator 94579..95499 Burkholderia phytofirmans PsJN 6281104 YP_001893751.1 CDS Bphyt_0077 NC_010681.1 95634 96227 R TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: bxe:Bxe_C1109 aromatic acid decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(95634..96227) Burkholderia phytofirmans PsJN 6281105 YP_001893752.1 CDS Bphyt_0078 NC_010681.1 96224 97567 R TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein; KEGG: bxe:Bxe_B1121 carboxylyase-related protein; UbiD family decarboxylase complement(96224..97567) Burkholderia phytofirmans PsJN 6281106 YP_001893753.1 CDS Bphyt_0079 NC_010681.1 97764 98918 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_C1107 AraC family transcriptional regulator; AraC family transcriptional regulator 97764..98918 Burkholderia phytofirmans PsJN 6282049 YP_001893754.1 CDS Bphyt_0080 NC_010681.1 99091 100518 D PFAM: aldehyde dehydrogenase_; KEGG: bxe:Bxe_C1106 aldehyde dehydrogenase; aldehyde dehydrogenase 99091..100518 Burkholderia phytofirmans PsJN 6282050 YP_001893755.1 CDS Bphyt_0081 NC_010681.1 101029 101316 R hypothetical protein complement(101029..101316) Burkholderia phytofirmans PsJN 6282051 YP_001893756.1 CDS Bphyt_0082 NC_010681.1 101715 102809 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bpt:Bpet0162 transcriptional regulator, LacI-family; LacI family transcriptional regulator complement(101715..102809) Burkholderia phytofirmans PsJN 6282052 YP_001893757.1 CDS Bphyt_0083 NC_010681.1 102962 104251 D PFAM: extracellular solute-binding protein family 1; KEGG: pna:Pnap_3689 extracellular solute-binding protein, family 1; family 1 extracellular solute-binding protein 102962..104251 Burkholderia phytofirmans PsJN 6282053 YP_001893758.1 CDS Bphyt_0086 NC_010681.1 105093 106013 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1639 LysR family transcriptional regulator; LysR family transcriptional regulator complement(105093..106013) Burkholderia phytofirmans PsJN 6284097 YP_001893759.1 CDS Bphyt_0087 NC_010681.1 106307 106684 D PFAM: protein of unknown function DUF336; KEGG: gox:GOX0922 hypothetical protein; hypothetical protein 106307..106684 Burkholderia phytofirmans PsJN 6284098 YP_001893760.1 CDS Bphyt_0088 NC_010681.1 106681 107841 D KEGG: gdi:GDI0861 major royal jelly-like protein; major royal jelly-like protein 106681..107841 Burkholderia phytofirmans PsJN 6284099 YP_001893761.1 CDS Bphyt_0089 NC_010681.1 107899 109131 D PFAM: major facilitator superfamily MFS_1; KEGG: spq:SPAB_00598 hypothetical protein; hypothetical protein 107899..109131 Burkholderia phytofirmans PsJN 6284100 YP_001893762.1 CDS Bphyt_0093 NC_010681.1 109893 110165 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: gvi:gsr0278 hypothetical protein; prevent-host-death family protein 109893..110165 Burkholderia phytofirmans PsJN 6280780 YP_001893763.1 CDS Bphyt_0094 NC_010681.1 110165 110578 D KEGG: neu:NE1622 protein of unknown function DUF132; hypothetical protein 110165..110578 Burkholderia phytofirmans PsJN 6280781 YP_001893764.1 CDS Bphyt_0097 NC_010681.1 111634 111849 R KEGG: bpt:Bpet3764 hypothetical protein; hypothetical protein complement(111634..111849) Burkholderia phytofirmans PsJN 6280784 YP_001893765.1 CDS Bphyt_0098 NC_010681.1 111851 112708 R SMART: ATPase AAA; KEGG: bxe:Bxe_C0709 ATPase; ATPase AAA complement(111851..112708) Burkholderia phytofirmans PsJN 6280818 YP_001893766.1 CDS Bphyt_0099 NC_010681.1 112705 114141 R PFAM: integrase; KEGG: bpt:Bpet3758 transposase; integrase complement(112705..114141) Burkholderia phytofirmans PsJN 6280819 YP_001893767.1 CDS Bphyt_0100 NC_010681.1 114240 114818 R KEGG: bpt:Bpet3757 hypothetical protein; hypothetical protein complement(114240..114818) Burkholderia phytofirmans PsJN 6280820 YP_001893768.1 CDS Bphyt_0102 NC_010681.1 115306 117990 R TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter related; KEGG: har:HEAR2032 excinuclease ABC subunit A2 UvrA; excinuclease ABC subunit A complement(115306..117990) Burkholderia phytofirmans PsJN 6280822 YP_001893769.1 CDS Bphyt_0103 NC_010681.1 118048 119367 R PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: har:HEAR2034 recombination factor protein RarA; recombination factor protein RarA complement(118048..119367) Burkholderia phytofirmans PsJN 6280823 YP_001893770.1 CDS Bphyt_0104 NC_010681.1 119410 120729 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: har:HEAR2035 NADH dehydrogenase transmembrane protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(119410..120729) Burkholderia phytofirmans PsJN 6280824 YP_001893771.1 CDS Bphyt_0105 NC_010681.1 120748 121578 R KEGG: har:HEAR2036 S-formylglutathione hydrolase; TIGRFAM: S-formylglutathione hydrolase; PFAM: esterase; S-formylglutathione hydrolase complement(120748..121578) Burkholderia phytofirmans PsJN 6284592 YP_001893772.1 CDS Bphyt_0106 NC_010681.1 121647 122987 R KEGG: har:HEAR2037 hypothetical protein; hypothetical protein complement(121647..122987) Burkholderia phytofirmans PsJN 6284593 YP_001893773.1 CDS Bphyt_0107 NC_010681.1 123172 123570 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: har:HEAR2038 enzyme; glyoxalase/bleomycin resistance protein/dioxygenase complement(123172..123570) Burkholderia phytofirmans PsJN 6284594 YP_001893774.1 CDS Bphyt_0108 NC_010681.1 123622 124731 R TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: har:HEAR2039 alcohol dehydrogenase class III (glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH); S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase complement(123622..124731) Burkholderia phytofirmans PsJN 6284595 YP_001893775.1 CDS Bphyt_0109 NC_010681.1 124786 125061 R formaldehyde-induced negative regulator of the frmRAB operon; regulator protein FrmR complement(124786..125061) Burkholderia phytofirmans PsJN 6284596 YP_001893776.1 CDS Bphyt_0110 NC_010681.1 125255 126853 R KEGG: ppw:PputW619_4969 glutamate--cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase; glutamate/cysteine ligase complement(125255..126853) Burkholderia phytofirmans PsJN 6284597 YP_001893777.1 CDS Bphyt_0111 NC_010681.1 127223 128437 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: har:HEAR2048 glutathione-independent formaldehyde dehydrogenase (FDH) (FALDH); alcohol dehydrogenase GroES domain-containing protein complement(127223..128437) Burkholderia phytofirmans PsJN 6282680 YP_001893778.1 CDS Bphyt_0112 NC_010681.1 129036 129230 D KEGG: bmu:Bmul_2039 hypothetical protein; hypothetical protein 129036..129230 Burkholderia phytofirmans PsJN 6282681 YP_001893779.1 CDS Bphyt_0113 NC_010681.1 129281 130345 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bpd:BURPS668_0861 DJ-1/PfpI family protein/AraC family transcriptional regulator; AraC family transcriptional regulator complement(129281..130345) Burkholderia phytofirmans PsJN 6282682 YP_001893780.1 CDS Bphyt_0115 NC_010681.1 131514 132455 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: har:HEAR2047 transcription regulator, LysR family; LysR family transcriptional regulator 131514..132455 Burkholderia phytofirmans PsJN 6282684 YP_001893781.1 CDS Bphyt_0116 NC_010681.1 132757 134736 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-subunit beta is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 132757..134736 Burkholderia phytofirmans PsJN 6282685 YP_001893782.1 CDS Bphyt_0118 NC_010681.1 135509 135910 D KEGG: har:HEAR2037 hypothetical protein; hypothetical protein 135509..135910 Burkholderia phytofirmans PsJN 6283104 YP_001893783.1 CDS Bphyt_0119 NC_010681.1 136063 137451 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bxe:Bxe_A3840 cytochrome oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 136063..137451 Burkholderia phytofirmans PsJN 6283105 YP_001893784.1 CDS Bphyt_0120 NC_010681.1 137456 138463 D TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bxe:Bxe_A3839 cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 137456..138463 Burkholderia phytofirmans PsJN 6283106 YP_001893785.1 CDS Bphyt_0121 NC_010681.1 138700 139611 D PFAM: protein of unknown function UPF0187; KEGG: bxe:Bxe_A3838 hypothetical protein; hypothetical protein 138700..139611 Burkholderia phytofirmans PsJN 6283107 YP_001893786.1 CDS Bphyt_0122 NC_010681.1 139659 140261 D PFAM: transport-associated; KEGG: bvi:Bcep1808_6210 transport-associated; transport-associated 139659..140261 Burkholderia phytofirmans PsJN 6283108 YP_001893787.1 CDS Bphyt_0124 NC_010681.1 141178 141618 R KEGG: bxe:Bxe_B0781 hypothetical protein; hypothetical protein complement(141178..141618) Burkholderia phytofirmans PsJN 6282733 YP_001893788.1 CDS Bphyt_0125 NC_010681.1 142979 143545 D KEGG: bxe:Bxe_C0414 hypothetical protein; hypothetical protein 142979..143545 Burkholderia phytofirmans PsJN 6282734 YP_001893789.1 CDS Bphyt_0126 NC_010681.1 143570 144283 R PFAM: autoinducer synthesis protein; KEGG: bxe:Bxe_C0415 autoinducer synthesis protein; autoinducer synthesis protein complement(143570..144283) Burkholderia phytofirmans PsJN 6282735 YP_001893790.1 CDS Bphyt_0127 NC_010681.1 144448 145068 R PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bxe:Bxe_C0416 LuxR family transcriptional regulator; LuxR family transcriptional regulator complement(144448..145068) Burkholderia phytofirmans PsJN 6282736 YP_001893791.1 CDS Bphyt_0128 NC_010681.1 145124 145339 R KEGG: bpt:Bpet3764 hypothetical protein; hypothetical protein complement(145124..145339) Burkholderia phytofirmans PsJN 6282737 YP_001893792.1 CDS Bphyt_0129 NC_010681.1 145341 146198 R SMART: ATPase AAA; KEGG: bxe:Bxe_C0709 ATPase; ATPase AAA complement(145341..146198) Burkholderia phytofirmans PsJN 6282738 YP_001893793.1 CDS Bphyt_0130 NC_010681.1 146195 147631 R PFAM: integrase; KEGG: bpt:Bpet3758 transposase; integrase complement(146195..147631) Burkholderia phytofirmans PsJN 6283334 YP_001893794.1 CDS Bphyt_0131 NC_010681.1 147730 148308 R KEGG: bpt:Bpet3757 hypothetical protein; hypothetical protein complement(147730..148308) Burkholderia phytofirmans PsJN 6283335 YP_001893795.1 CDS Bphyt_0132 NC_010681.1 148981 149907 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: bxe:Bxe_C0417 hypothetical protein; 3-oxoacyl-ACP synthase complement(148981..149907) Burkholderia phytofirmans PsJN 6283336 YP_001893796.1 CDS Bphyt_0133 NC_010681.1 149904 150965 R KEGG: bxe:Bxe_C0418 hypothetical protein; hypothetical protein complement(149904..150965) Burkholderia phytofirmans PsJN 6283337 YP_001893797.1 CDS Bphyt_0134 NC_010681.1 150962 151570 R KEGG: bxe:Bxe_C0419 hypothetical protein; hypothetical protein complement(150962..151570) Burkholderia phytofirmans PsJN 6283338 YP_001893798.1 CDS Bphyt_0135 NC_010681.1 151596 152684 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_C0420 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(151596..152684) Burkholderia phytofirmans PsJN 6283339 YP_001893799.1 CDS Bphyt_0136 NC_010681.1 152710 153918 R TIGRFAM: pyridoxal-dependent decarboxylase, exosortase system type 1 associated; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bxe:Bxe_C0421 Orn/DAP/Arg decarboxylase; pyridoxal-dependent decarboxylase complement(152710..153918) Burkholderia phytofirmans PsJN 6283911 YP_001893800.1 CDS Bphyt_0137 NC_010681.1 153915 155534 R TIGRFAM: acyl-CoA ligase (AMP-forming), exosortase system type 1 associated; PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_C0422 AMP-dependent synthetase and ligase; acyl-CoA ligase complement(153915..155534) Burkholderia phytofirmans PsJN 6283912 YP_001893801.1 CDS Bphyt_0138 NC_010681.1 155560 156507 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bxe:Bxe_C0423 hypothetical protein; 3-oxoacyl-ACP synthase complement(155560..156507) Burkholderia phytofirmans PsJN 6283913 YP_001893802.1 CDS Bphyt_0139 NC_010681.1 156510 157532 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bxe:Bxe_C0424 hypothetical protein; 3-oxoacid CoA-transferase subunit A complement(156510..157532) Burkholderia phytofirmans PsJN 6283914 YP_001893803.1 CDS Bphyt_0140 NC_010681.1 157516 157794 R KEGG: bxe:Bxe_C0425 hypothetical protein; hypothetical protein complement(157516..157794) Burkholderia phytofirmans PsJN 6283915 YP_001893804.1 CDS Bphyt_0141 NC_010681.1 157784 159094 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_C0426 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(157784..159094) Burkholderia phytofirmans PsJN 6283916 YP_001893805.1 CDS Bphyt_0142 NC_010681.1 159334 160170 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_C0427 GntR family transcriptional regulator; GntR family transcriptional regulator 159334..160170 Burkholderia phytofirmans PsJN 6283917 YP_001893806.1 CDS Bphyt_0143 NC_010681.1 160225 161649 R PFAM: amidase; KEGG: bxe:Bxe_C0428 amidase; amidase complement(160225..161649) Burkholderia phytofirmans PsJN 6281889 YP_001893807.1 CDS Bphyt_0144 NC_010681.1 161980 162309 R PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_C0429 XRE family transcriptional regulator; XRE family transcriptional regulator complement(161980..162309) Burkholderia phytofirmans PsJN 6281890 YP_001893808.1 CDS Bphyt_0145 NC_010681.1 162367 162726 R SMART: helix-turn-helix domain protein; KEGG: bxe:Bxe_C0430 XRE family transcriptional regulator; XRE family transcriptional regulator complement(162367..162726) Burkholderia phytofirmans PsJN 6281891 YP_001893809.1 CDS Bphyt_0146 NC_010681.1 162891 163766 D PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C0431 ABC branched chain amino acid family transporter inner membrane subunit; branched-chain amino acid ABC transporter inner membrane protein 162891..163766 Burkholderia phytofirmans PsJN 6281892 YP_001893810.1 CDS Bphyt_0147 NC_010681.1 163772 164854 D PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C0432 ABC branched chain amino acid family transporter inner membrane subunit; branched-chain amino acid ABC transporter inner membrane protein 163772..164854 Burkholderia phytofirmans PsJN 6281893 YP_001893811.1 CDS Bphyt_0148 NC_010681.1 164854 165588 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_C0433 ABC branched chain amino acid family transporter ATPase subunit; branched-chain amino acid ABC transporter ATPase 164854..165588 Burkholderia phytofirmans PsJN 6281894 YP_001893812.1 CDS Bphyt_0149 NC_010681.1 165575 166318 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_C0434 ABC branched chain amino acid family transporter ATPase subunit; branched-chain amino acid ABC transporter ATPase 165575..166318 Burkholderia phytofirmans PsJN 6283893 YP_001893813.1 CDS Bphyt_0150 NC_010681.1 166337 167515 D KEGG: bxe:Bxe_C0435 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched chain amino acid ABC transporter substrate-binding protein 166337..167515 Burkholderia phytofirmans PsJN 6283894 YP_001893814.1 CDS Bphyt_0151 NC_010681.1 167570 168997 D PFAM: amidase; KEGG: bxe:Bxe_C0436 amidase; amidase 167570..168997 Burkholderia phytofirmans PsJN 6283895 YP_001893815.1 CDS Bphyt_0152 NC_010681.1 168994 169539 D PFAM: protein of unknown function DUF1185; KEGG: bxe:Bxe_C0437 hypothetical protein; hypothetical protein 168994..169539 Burkholderia phytofirmans PsJN 6283896 YP_001893816.1 CDS Bphyt_0153 NC_010681.1 169621 170655 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_C0438 outer membrane porin, OmpC family; porin 169621..170655 Burkholderia phytofirmans PsJN 6283897 YP_001893817.1 CDS Bphyt_0154 NC_010681.1 170907 171149 D PFAM: prophage CP4-57 regulator; KEGG: bxe:Bxe_C0440 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 170907..171149 Burkholderia phytofirmans PsJN 6283898 YP_001893818.1 CDS Bphyt_0155 NC_010681.1 171146 171472 D KEGG: bxe:Bxe_A2661 hypothetical protein; hypothetical protein 171146..171472 Burkholderia phytofirmans PsJN 6283754 YP_001893819.1 CDS Bphyt_0156 NC_010681.1 171763 172167 R PFAM: PilT protein domain protein; KEGG: bxe:Bxe_C0442 nitrogen regulatory protein NtrR; PilT protein domain-containing protein complement(171763..172167) Burkholderia phytofirmans PsJN 6283755 YP_001893820.1 CDS Bphyt_0157 NC_010681.1 172164 172436 R PFAM: SpoVT/AbrB domain protein; KEGG: bxe:Bxe_C0443 nitrogen regulatory protein NtrP; SpoVT/AbrB domain-containing protein complement(172164..172436) Burkholderia phytofirmans PsJN 6283756 YP_001893821.1 CDS Bphyt_0158 NC_010681.1 172963 173835 D KEGG: bxe:Bxe_C0445 hypothetical protein; hypothetical protein 172963..173835 Burkholderia phytofirmans PsJN 6283757 YP_001893822.1 CDS Bphyt_0159 NC_010681.1 173828 174412 D KEGG: bxe:Bxe_C0446 hypothetical protein; hypothetical protein 173828..174412 Burkholderia phytofirmans PsJN 6283758 YP_001893823.1 CDS Bphyt_0160 NC_010681.1 174409 175086 D PFAM: lytic transglycosylase catalytic; KEGG: bxe:Bxe_C0447 type IV secretion system protein VirB1; lytic transglycosylase 174409..175086 Burkholderia phytofirmans PsJN 6283759 YP_001893824.1 CDS Bphyt_0161 NC_010681.1 175142 175465 D PFAM: Conjugal transfer protein TrbC; KEGG: bxe:Bxe_C0448 type IV secretion system protein VirB2/TraC; conjugal transfer protein Trbc 175142..175465 Burkholderia phytofirmans PsJN 6283760 YP_001893825.1 CDS Bphyt_0162 NC_010681.1 175479 175811 D PFAM: type IV secretory pathway VirB3 family protein; KEGG: bxe:Bxe_C0449 type IV secretion system protein VirB3/TraD; type IV secretory pathway VirB3 family protein 175479..175811 Burkholderia phytofirmans PsJN 6281706 YP_001893826.1 CDS Bphyt_0163 NC_010681.1 175813 178281 D TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: bxe:Bxe_C0450 type IV secretion system protein VirB4/TraE; type IV secretion/conjugal transfer ATPase 175813..178281 Burkholderia phytofirmans PsJN 6281707 YP_001893827.1 CDS Bphyt_0164 NC_010681.1 178278 179435 D PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: bxe:Bxe_C0451 type IV secretion system protein VirB6/TraH; TrbL/VirB6 plasmid conjugal transfer protein 178278..179435 Burkholderia phytofirmans PsJN 6281708 YP_001893828.1 CDS Bphyt_0165 NC_010681.1 179432 180142 D TIGRFAM: P-type DNA transfer protein VirB5; PFAM: type IV secretion system family protein; KEGG: bxe:Bxe_C0452 type IV secretion system protein VirB5/TraF; P-type DNA transfer protein VirB5 179432..180142 Burkholderia phytofirmans PsJN 6281709 YP_001893829.1 CDS Bphyt_0166 NC_010681.1 180178 180342 D hypothetical protein 180178..180342 Burkholderia phytofirmans PsJN 6281710 YP_001893830.1 CDS Bphyt_0167 NC_010681.1 180332 181090 D PFAM: VirB8 family protein; KEGG: bxe:Bxe_C0453 type IV secretion system protein VirB8/TraJ; VirB8 family protein 180332..181090 Burkholderia phytofirmans PsJN 6281711 YP_001893831.1 CDS Bphyt_0168 NC_010681.1 181087 181932 D PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bxe:Bxe_C0454 type IV secretion system protein VirB9; conjugal transfer protein TrbG 181087..181932 Burkholderia phytofirmans PsJN 6280812 YP_001893832.1 CDS Bphyt_0169 NC_010681.1 181925 183127 D PFAM: conjugation TrbI family protein; KEGG: bxe:Bxe_C0455 type IV secretion system protein VirB10; conjugation TrbI family protein 181925..183127 Burkholderia phytofirmans PsJN 6280813 YP_001893833.1 CDS Bphyt_0170 NC_010681.1 183124 184251 D TIGRFAM: P-type DNA transfer ATPase VirB11; PFAM: type II secretion system protein E; KEGG: bxe:Bxe_C0456 type IV secretion system protein VirB11; P-type DNA transfer ATPase VirB11 183124..184251 Burkholderia phytofirmans PsJN 6280814 YP_001893834.1 CDS Bphyt_0171 NC_010681.1 184266 184676 D KEGG: bxe:Bxe_C0457 hypothetical protein; hypothetical protein 184266..184676 Burkholderia phytofirmans PsJN 6280815 YP_001893835.1 CDS Bphyt_0172 NC_010681.1 184673 186457 D PFAM: TRAG family protein; KEGG: bxe:Bxe_C0458 type IV secretory pathway protein VirD4; TRAG family protein 184673..186457 Burkholderia phytofirmans PsJN 6280816 YP_001893836.1 CDS Bphyt_0173 NC_010681.1 186454 188367 D PFAM: Primase 2; KEGG: bxe:Bxe_C0459 DNA replication primase; primase 2 186454..188367 Burkholderia phytofirmans PsJN 6280817 YP_001893837.1 CDS Bphyt_0174 NC_010681.1 188413 190002 D KEGG: bxe:Bxe_C0460 DNA primase, DNA transfer TraO-like protein; DNA primase, DNA transfer TraO-like protein 188413..190002 Burkholderia phytofirmans PsJN 6281769 YP_001893838.1 CDS Bphyt_0175 NC_010681.1 190013 190534 D KEGG: bxe:Bxe_C0461 plasmid-related protein; plasmid-like protein 190013..190534 Burkholderia phytofirmans PsJN 6281770 YP_001893839.1 CDS Bphyt_0176 NC_010681.1 190536 191585 D PFAM: Relaxase/mobilization nuclease family protein; KEGG: bxe:Bxe_C0462 DNA relaxase/nickase, TraS/VirD2-like; Relaxase/mobilization nuclease family protein 190536..191585 Burkholderia phytofirmans PsJN 6281771 YP_001893840.1 CDS Bphyt_0177 NC_010681.1 191600 192391 D PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: bxe:Bxe_C0463 N6 adenine-specific DNA methyltransferase, D12 class; D12 class N6 adenine-specific DNA methyltransferase 191600..192391 Burkholderia phytofirmans PsJN 6281772 YP_001893841.1 CDS Bphyt_0178 NC_010681.1 192467 192898 R KEGG: bxe:Bxe_C0464 hypothetical protein; hypothetical protein complement(192467..192898) Burkholderia phytofirmans PsJN 6281773 YP_001893842.1 CDS Bphyt_0179 NC_010681.1 193524 193787 R KEGG: bmu:Bmul_4134 hypothetical protein; hypothetical protein complement(193524..193787) Burkholderia phytofirmans PsJN 6281774 YP_001893843.1 CDS Bphyt_0181 NC_010681.1 194654 195394 R TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_1716 acetyacetyl-CoA reductase; acetoacetyl-CoA reductase complement(194654..195394) Burkholderia phytofirmans PsJN 6284123 YP_001893844.1 CDS Bphyt_0185 NC_010681.1 198084 200225 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: bur:Bcep18194_C7111 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 198084..200225 Burkholderia phytofirmans PsJN 6284127 YP_001893845.1 CDS Bphyt_0186 NC_010681.1 200365 202338 D KEGG: azo:azo2450 two-component system sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 200365..202338 Burkholderia phytofirmans PsJN 6284128 YP_001893846.1 CDS Bphyt_0187 NC_010681.1 202322 203386 D PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: azo:azo2449 two component response regulator; response regulator receiver modulated metal dependent phosphohydrolase 202322..203386 Burkholderia phytofirmans PsJN 6284197 YP_001893847.1 CDS Bphyt_0189 NC_010681.1 204111 205199 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1936 outer membrane porin, OmpC family; porin complement(204111..205199) Burkholderia phytofirmans PsJN 6284199 YP_001893848.1 CDS Bphyt_0190 NC_010681.1 205436 206818 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1937 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(205436..206818) Burkholderia phytofirmans PsJN 6284200 YP_001893849.1 CDS Bphyt_0191 NC_010681.1 206857 207183 R KEGG: bxe:Bxe_B1938 hypothetical protein; hypothetical protein complement(206857..207183) Burkholderia phytofirmans PsJN 6284201 YP_001893850.1 CDS Bphyt_0192 NC_010681.1 207180 208517 R PFAM: protein of unknown function DUF1446; KEGG: bxe:Bxe_B1939 hypothetical protein; hypothetical protein complement(207180..208517) Burkholderia phytofirmans PsJN 6284202 YP_001893851.1 CDS Bphyt_0193 NC_010681.1 208765 209625 D PFAM: amidohydrolase 2; KEGG: bxe:Bxe_B1940 amidohydrolase; amidohydrolase 2 208765..209625 Burkholderia phytofirmans PsJN 6280832 YP_001893852.1 CDS Bphyt_0194 NC_010681.1 209766 210644 D PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: bxe:Bxe_B1941 IclR family transcriptional regulator; IclR family transcriptional regulator 209766..210644 Burkholderia phytofirmans PsJN 6280833 YP_001893853.1 CDS Bphyt_0196 NC_010681.1 211204 212040 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: rso:RSp0953 transposase/IS protein; transposase/IS protein complement(211204..212040) Burkholderia phytofirmans PsJN 6280835 YP_001893854.1 CDS Bphyt_0198 NC_010681.1 212745 213533 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bmu:Bmul_5654 IstB domain protein ATP-binding protein; IstB domain-containing protein ATP-binding protein complement(212745..213533) Burkholderia phytofirmans PsJN 6280837 YP_001893855.1 CDS Bphyt_0199 NC_010681.1 213540 215078 R PFAM: integrase; KEGG: bmu:Bmul_6239 integrase catalytic region; integrase complement(213540..215078) Burkholderia phytofirmans PsJN 6280838 YP_001893856.1 CDS Bphyt_0200 NC_010681.1 215928 216449 D hypothetical protein 215928..216449 Burkholderia phytofirmans PsJN 6281757 YP_001893857.1 CDS Bphyt_0202 NC_010681.1 216867 219998 R KEGG: bmu:Bmul_6269 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III subunit alpha; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha complement(216867..219998) Burkholderia phytofirmans PsJN 6281759 YP_001893858.1 CDS Bphyt_0203 NC_010681.1 220029 221492 R KEGG: bch:Bcen2424_2827 hypothetical protein; hypothetical protein complement(220029..221492) Burkholderia phytofirmans PsJN 6281760 YP_001893859.1 CDS Bphyt_0204 NC_010681.1 221416 222198 R KEGG: bvi:Bcep1808_6888 hypothetical protein; hypothetical protein complement(221416..222198) Burkholderia phytofirmans PsJN 6281761 YP_001893860.1 CDS Bphyt_0205 NC_010681.1 222391 222723 D PFAM: regulatory protein ArsR; KEGG: bmu:Bmul_5376 ArsR family transcriptional regulator; ArsR family transcriptional regulator 222391..222723 Burkholderia phytofirmans PsJN 6281762 YP_001893861.1 CDS Bphyt_0207 NC_010681.1 223174 223695 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rme:Rmet_0331 protein tyrosine phosphatase; protein tyrosine phosphatase 223174..223695 Burkholderia phytofirmans PsJN 6281440 YP_001893862.1 CDS Bphyt_0208 NC_010681.1 223682 224743 D TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bxe:Bxe_B0303 arsenite/antimonite exporter, ArsB like; arsenic resistance protein 223682..224743 Burkholderia phytofirmans PsJN 6281441 YP_001893863.1 CDS Bphyt_0209 NC_010681.1 224753 225199 D PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A2343 As reductase; N-acetyltransferase GCN5 224753..225199 Burkholderia phytofirmans PsJN 6281442 YP_001893864.1 CDS Bphyt_0210 NC_010681.1 225221 225985 D TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bxe:Bxe_B0301 arsinic resistance protein ArsH; arsenical resistance protein ArsH 225221..225985 Burkholderia phytofirmans PsJN 6281443 YP_001893865.1 CDS Bphyt_0211 NC_010681.1 225972 227198 D PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_1275 hypothetical protein; major facilitator superfamily protein 225972..227198 Burkholderia phytofirmans PsJN 6281444 YP_001893866.1 CDS Bphyt_0212 NC_010681.1 227283 228665 D PFAM: integrase family protein; KEGG: dac:Daci_2980 integrase family protein; integrase family protein 227283..228665 Burkholderia phytofirmans PsJN 6282538 YP_001893867.1 CDS Bphyt_0213 NC_010681.1 228694 231300 D PFAM: integrase family protein; KEGG: dac:Daci_2981 integrase family protein; integrase family protein 228694..231300 Burkholderia phytofirmans PsJN 6282539 YP_001893868.1 CDS Bphyt_0214 NC_010681.1 231297 231959 D KEGG: dac:Daci_2982 alpha/beta hydrolase fold; alpha/beta fold family hydrolase 231297..231959 Burkholderia phytofirmans PsJN 6282540 YP_001893869.1 CDS Bphyt_0215 NC_010681.1 232220 232504 D KEGG: bvi:Bcep1808_7547 hypothetical protein; hypothetical protein 232220..232504 Burkholderia phytofirmans PsJN 6282541 YP_001893870.1 CDS Bphyt_0216 NC_010681.1 232542 233501 D KEGG: rfr:Rfer_3054 uncharacterized conserved protein; hypothetical protein 232542..233501 Burkholderia phytofirmans PsJN 6282542 YP_001893871.1 CDS Bphyt_0217 NC_010681.1 233619 235835 D KEGG: eli:ELI_00750 hypothetical protein; hypothetical protein 233619..235835 Burkholderia phytofirmans PsJN 6282543 YP_001893872.1 CDS Bphyt_0218 NC_010681.1 236252 236773 D PFAM: chemotaxis sensory transducer; KEGG: har:HEAR3088 methyl-accepting chemotaxis protein I, serine sensor receptor; methyl-accepting chemotaxis sensory transducer 236252..236773 Burkholderia phytofirmans PsJN 6282544 YP_001893873.1 CDS Bphyt_0219 NC_010681.1 237119 237598 R TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: bxe:Bxe_A3137 bacterioferritin; bacterioferritin complement(237119..237598) Burkholderia phytofirmans PsJN 6284726 YP_001893874.1 CDS Bphyt_0220 NC_010681.1 237940 238389 D catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 237940..238389 Burkholderia phytofirmans PsJN 6284727 YP_001893875.1 CDS Bphyt_0221 NC_010681.1 238386 238841 R KEGG: bvi:Bcep1808_5978 Fis family transcriptional regulator; Fis family transcriptional regulator complement(238386..238841) Burkholderia phytofirmans PsJN 6284728 YP_001893876.1 CDS Bphyt_0222 NC_010681.1 239034 239327 D hypothetical protein 239034..239327 Burkholderia phytofirmans PsJN 6284729 YP_001893877.1 CDS Bphyt_0223 NC_010681.1 239597 239764 D hypothetical protein 239597..239764 Burkholderia phytofirmans PsJN 6284730 YP_001893878.1 CDS Bphyt_0224 NC_010681.1 239774 240649 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO6919 short-chain dehydrogenase/reductase (SDR); short-chain dehydrogenase/reductase SDR complement(239774..240649) Burkholderia phytofirmans PsJN 6284731 YP_001893879.1 CDS Bphyt_0225 NC_010681.1 240736 241665 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0678 LysR family transcriptional regulator; LysR family transcriptional regulator complement(240736..241665) Burkholderia phytofirmans PsJN 6283808 YP_001893880.1 CDS Bphyt_0226 NC_010681.1 241745 243148 R PFAM: cytochrome C class I; KEGG: pae:PA2266 probable cytochrome C precursor; gluconate 2-dehydrogenase complement(241745..243148) Burkholderia phytofirmans PsJN 6283809 YP_001893881.1 CDS Bphyt_0227 NC_010681.1 243160 244938 R PFAM: glucose-methanol-choline oxidoreductase; KEGG: spe:Spro_2015 gluconate 2-dehydrogenase; gluconate 2-dehydrogenase complement(243160..244938) Burkholderia phytofirmans PsJN 6283810 YP_001893882.1 CDS Bphyt_0228 NC_010681.1 244987 245706 R KEGG: bmu:Bmul_4382 gluconate 2-dehydrogenase; gluconate 2-dehydrogenase complement(244987..245706) Burkholderia phytofirmans PsJN 6283811 YP_001893883.1 CDS Bphyt_0229 NC_010681.1 246115 246435 D PFAM: regulatory protein LysR; KEGG: ppw:PputW619_2314 LysR family transcriptional regulator; LysR family transcriptional regulator 246115..246435 Burkholderia phytofirmans PsJN 6283812 YP_001893884.1 CDS Bphyt_0230 NC_010681.1 246869 247603 D KEGG: bxe:Bxe_B0124 PAS/PAC sensor protein; PAS/PAC sensor protein 246869..247603 Burkholderia phytofirmans PsJN 6283813 YP_001893885.1 CDS Bphyt_0231 NC_010681.1 247625 248599 D PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_B2682 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 247625..248599 Burkholderia phytofirmans PsJN 6282276 YP_001893886.1 CDS Bphyt_0233 NC_010681.1 249291 250412 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_2608 diguanylate cyclase; diguanylate cyclase 249291..250412 Burkholderia phytofirmans PsJN 6282278 YP_001893887.1 CDS Bphyt_0234 NC_010681.1 251060 252160 R PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: ssn:SSON_4218 transposase; transposase IS116/IS110/IS902 family protein complement(251060..252160) Burkholderia phytofirmans PsJN 6282279 YP_001893888.1 CDS Bphyt_0235 NC_010681.1 252454 252915 R KEGG: bvi:Bcep1808_5978 Fis family transcriptional regulator; Fis family transcriptional regulator complement(252454..252915) Burkholderia phytofirmans PsJN 6282280 YP_001893889.1 CDS Bphyt_0237 NC_010681.1 254041 254490 D KEGG: bxe:Bxe_C0473 hypothetical protein; hypothetical protein 254041..254490 Burkholderia phytofirmans PsJN 6282282 YP_001893890.1 CDS Bphyt_0238 NC_010681.1 254500 255204 D KEGG: bxe:Bxe_C0474 hypothetical protein; hypothetical protein 254500..255204 Burkholderia phytofirmans PsJN 6283590 YP_001893891.1 CDS Bphyt_0239 NC_010681.1 255197 255916 D KEGG: bxe:Bxe_C0475 hypothetical protein; hypothetical protein 255197..255916 Burkholderia phytofirmans PsJN 6283591 YP_001893892.1 CDS Bphyt_0240 NC_010681.1 256031 256288 R KEGG: mgm:Mmc1_2902 hypothetical protein; hypothetical protein complement(256031..256288) Burkholderia phytofirmans PsJN 6283592 YP_001893893.1 CDS Bphyt_0241 NC_010681.1 256433 256678 R KEGG: bxe:Bxe_C0476 hypothetical protein; hypothetical protein complement(256433..256678) Burkholderia phytofirmans PsJN 6283593 YP_001893894.1 CDS Bphyt_0243 NC_010681.1 259065 260291 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sus:acid_2520 phage integrase family protein; integrase family protein 259065..260291 Burkholderia phytofirmans PsJN 6283595 YP_001893895.1 CDS Bphyt_0244 NC_010681.1 260288 261637 D PFAM: integrase family protein; KEGG: sus:acid_2521 phage integrase family protein; integrase family protein 260288..261637 Burkholderia phytofirmans PsJN 6283676 YP_001893896.1 CDS Bphyt_0245 NC_010681.1 261634 262635 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sus:acid_2522 phage integrase family protein; integrase family protein 261634..262635 Burkholderia phytofirmans PsJN 6283677 YP_001893897.1 CDS Bphyt_0246 NC_010681.1 263021 263611 R PFAM: protein of unknown function DUF932; KEGG: bxe:Bxe_C0478 hypothetical protein; hypothetical protein complement(263021..263611) Burkholderia phytofirmans PsJN 6283678 YP_001893898.1 CDS Bphyt_0247 NC_010681.1 263664 264026 R hypothetical protein complement(263664..264026) Burkholderia phytofirmans PsJN 6283679 YP_001893899.1 CDS Bphyt_0248 NC_010681.1 264023 265906 R PFAM: integrase family protein; KEGG: psa:PST_0587 site-specific recombinase, phage integrase family; integrase family protein complement(264023..265906) Burkholderia phytofirmans PsJN 6283680 YP_001893900.1 CDS Bphyt_0249 NC_010681.1 265903 267786 R PFAM: integrase family protein; KEGG: psa:PST_0586 hypothetical protein; integrase family protein complement(265903..267786) Burkholderia phytofirmans PsJN 6283681 YP_001893901.1 CDS Bphyt_0250 NC_010681.1 267783 269231 R PFAM: integrase family protein; KEGG: xac:XAC3932 integrase/recombinase; integrase family protein complement(267783..269231) Burkholderia phytofirmans PsJN 6283282 YP_001893902.1 CDS Bphyt_0251 NC_010681.1 269271 269642 R PFAM: protein of unknown function DUF932; KEGG: bxe:Bxe_C0478 hypothetical protein; hypothetical protein complement(269271..269642) Burkholderia phytofirmans PsJN 6283283 YP_001893903.1 CDS Bphyt_0252 NC_010681.1 270373 270657 D KEGG: bxe:Bxe_C0480 hypothetical protein; hypothetical protein 270373..270657 Burkholderia phytofirmans PsJN 6283284 YP_001893904.1 CDS Bphyt_0253 NC_010681.1 270812 271063 R KEGG: bxe:Bxe_C0481 hypothetical protein; hypothetical protein complement(270812..271063) Burkholderia phytofirmans PsJN 6283285 YP_001893905.1 CDS Bphyt_0254 NC_010681.1 271084 271878 R SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_C0482 AraC family transcriptional regulator; AraC family transcriptional regulator complement(271084..271878) Burkholderia phytofirmans PsJN 6283286 YP_001893906.1 CDS Bphyt_0255 NC_010681.1 271984 273444 D PFAM: sodium/sulfate symporter; citrate transporter; KEGG: bxe:Bxe_C0483 Na+/divalent cation symporter, DASS family; sodium/sulfate symporter 271984..273444 Burkholderia phytofirmans PsJN 6283287 YP_001893907.1 CDS Bphyt_0256 NC_010681.1 273598 274566 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_C0484 LysR family transcriptional regulator; LysR family transcriptional regulator 273598..274566 Burkholderia phytofirmans PsJN 6283288 YP_001893908.1 CDS Bphyt_0257 NC_010681.1 274842 277109 D KEGG: rso:RS03051 hypothetical protein; hypothetical protein 274842..277109 Burkholderia phytofirmans PsJN 6283276 YP_001893909.1 CDS Bphyt_0258 NC_010681.1 277150 279012 D PFAM: carbamoyltransferase; KEGG: syn:sll1178 nodulation protein; carbamoyltransferase 277150..279012 Burkholderia phytofirmans PsJN 6283277 YP_001893910.1 CDS Bphyt_0259 NC_010681.1 279034 279222 D hypothetical protein 279034..279222 Burkholderia phytofirmans PsJN 6283278 YP_001893911.1 CDS Bphyt_0260 NC_010681.1 279255 280337 D KEGG: rso:RS03054 hypothetical protein; hypothetical protein 279255..280337 Burkholderia phytofirmans PsJN 6283279 YP_001893912.1 CDS Bphyt_0261 NC_010681.1 280360 280509 D hypothetical protein 280360..280509 Burkholderia phytofirmans PsJN 6283280 YP_001893913.1 CDS Bphyt_0262 NC_010681.1 280543 281583 D PFAM: fumarylacetoacetate hydrolase; KEGG: rxy:Rxyl_2241 fumarylacetoacetate hydrolase; fumarylacetoacetate hydrolase 280543..281583 Burkholderia phytofirmans PsJN 6283281 YP_001893914.1 CDS Bphyt_0263 NC_010681.1 281607 282806 D KEGG: mrd:Mrad2831_4071 amidohydrolase; hypothetical protein 281607..282806 Burkholderia phytofirmans PsJN 6282880 YP_001893915.1 CDS Bphyt_0264 NC_010681.1 282860 283738 R KEGG: vei:Veis_2452 hypothetical protein; hypothetical protein complement(282860..283738) Burkholderia phytofirmans PsJN 6282881 YP_001893916.1 CDS Bphyt_0265 NC_010681.1 284011 284307 R PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bvi:Bcep1808_5750 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS complement(284011..284307) Burkholderia phytofirmans PsJN 6282882 YP_001893917.1 CDS Bphyt_0266 NC_010681.1 284673 285101 D KEGG: rme:Rmet_6008 hypothetical protein; hypothetical protein 284673..285101 Burkholderia phytofirmans PsJN 6282883 YP_001893918.1 CDS Bphyt_0267 NC_010681.1 285205 285423 R hypothetical protein complement(285205..285423) Burkholderia phytofirmans PsJN 6282884 YP_001893919.1 CDS Bphyt_0268 NC_010681.1 285480 286262 D KEGG: pmy:Pmen_2122 hypothetical protein; hypothetical protein 285480..286262 Burkholderia phytofirmans PsJN 6282885 YP_001893920.1 CDS Bphyt_0269 NC_010681.1 286317 287534 D PFAM: integrase family protein; KEGG: hch:HCH_06750 integrase; integrase family protein 286317..287534 Burkholderia phytofirmans PsJN 6281982 YP_001893921.1 CDS Bphyt_0270 NC_010681.1 287601 288062 R PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll3910 transcriptional regulator; AsnC family transcriptional regulator complement(287601..288062) Burkholderia phytofirmans PsJN 6281983 YP_001893922.1 CDS Bphyt_0271 NC_010681.1 288332 289408 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; glycine hydroxymethyltransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mka:MK0122 glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 288332..289408 Burkholderia phytofirmans PsJN 6281984 YP_001893923.1 CDS Bphyt_0272 NC_010681.1 289447 290061 D PFAM: lysine exporter (LYSE/YGGA); KEGG: mlo:mll3530 hypothetical protein; lysine exporter protein LysE/YggA 289447..290061 Burkholderia phytofirmans PsJN 6281985 YP_001893924.1 CDS Bphyt_0273 NC_010681.1 291232 291891 D KEGG: gme:Gmet_2614 GAF sensor protein; hypothetical protein 291232..291891 Burkholderia phytofirmans PsJN 6281986 YP_001893925.1 CDS Bphyt_0274 NC_010681.1 292094 293251 R PFAM: UMUC domain protein DNA-repair protein; KEGG: rme:Rmet_3545 UMUC-like DNA-repair protein; DNA-directed DNA polymerase complement(292094..293251) Burkholderia phytofirmans PsJN 6281987 YP_001893926.1 CDS Bphyt_0275 NC_010681.1 294403 294864 D KEGG: bur:Bcep18194_B0101 hypothetical protein; hypothetical protein 294403..294864 Burkholderia phytofirmans PsJN 6281988 YP_001893927.1 CDS Bphyt_0276 NC_010681.1 294921 296360 D PFAM: FAD dependent oxidoreductase; KEGG: aor:AO090009000140 uncharacterized protein conserved in bacteria Pfam: DAO Pyr_redox_2 Formyl_trans_N PROSITE: LECTIN_LEGUME_BETA; FAD dependent oxidoreductase 294921..296360 Burkholderia phytofirmans PsJN 6281451 YP_001893928.1 CDS Bphyt_0277 NC_010681.1 296428 297096 D PFAM: glutathione S-transferase; KEGG: mrd:Mrad2831_4748 glutathione S-transferase protein; glutathione S-transferase 296428..297096 Burkholderia phytofirmans PsJN 6281452 YP_001893929.1 CDS Bphyt_0278 NC_010681.1 297124 297879 R PFAM: regulatory protein MarR; regulatory protein ArsR; KEGG: spe:Spro_2819 ArsR family transcriptional regulator; MarR family transcriptional regulator complement(297124..297879) Burkholderia phytofirmans PsJN 6281453 YP_001893930.1 CDS Bphyt_0279 NC_010681.1 297996 299387 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2818 major facilitator superfamily MFS_1; major facilitator superfamily protein 297996..299387 Burkholderia phytofirmans PsJN 6281454 YP_001893931.1 CDS Bphyt_0280 NC_010681.1 299503 300828 D KEGG: lpf:lpl1946 hypothetical protein; L-lysine 6-monooxygenase 299503..300828 Burkholderia phytofirmans PsJN 6281455 YP_001893932.1 CDS Bphyt_0281 NC_010681.1 300866 301234 D PFAM: cupin; KEGG: rha:RHA1_ro08652 hypothetical protein; cupin 300866..301234 Burkholderia phytofirmans PsJN 6281456 YP_001893933.1 CDS Bphyt_0282 NC_010681.1 301237 302298 D PFAM: FAD dependent oxidoreductase; KEGG: saq:Sare_1045 FAD dependent oxidoreductase; FAD dependent oxidoreductase 301237..302298 Burkholderia phytofirmans PsJN 6283937 YP_001893934.1 CDS Bphyt_0283 NC_010681.1 302388 303983 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 302388..303983 Burkholderia phytofirmans PsJN 6283938 YP_001893935.1 CDS Bphyt_0284 NC_010681.1 303976 305106 D PFAM: FAD dependent oxidoreductase; KEGG: mgi:Mflv_1296 FAD dependent oxidoreductase; FAD dependent oxidoreductase 303976..305106 Burkholderia phytofirmans PsJN 6283939 YP_001893936.1 CDS Bphyt_0285 NC_010681.1 306866 307429 D KEGG: mes:Meso_4139 ChrB domain protein; ChrB domain-containing protein 306866..307429 Burkholderia phytofirmans PsJN 6283940 YP_001893937.1 CDS Bphyt_0286 NC_010681.1 307447 308253 D PFAM: endonuclease/exonuclease/phosphatase; KEGG: scl:sce1381 nuclease; endonuclease/exonuclease/phosphatase 307447..308253 Burkholderia phytofirmans PsJN 6283941 YP_001893938.1 CDS Bphyt_0287 NC_010681.1 308256 309623 D PFAM: major facilitator superfamily MFS_1; KEGG: rme:Rmet_6139 major facilitator superfamily MFS_1; major facilitator superfamily protein 308256..309623 Burkholderia phytofirmans PsJN 6283942 YP_001893939.1 CDS Bphyt_0290 NC_010681.1 310857 311438 D hypothetical protein 310857..311438 Burkholderia phytofirmans PsJN 6280793 YP_001893940.1 CDS Bphyt_0291 NC_010681.1 312566 313552 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: aav:Aave_0807 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K complement(312566..313552) Burkholderia phytofirmans PsJN 6280794 YP_001893941.1 CDS Bphyt_0292 NC_010681.1 313654 314643 D PFAM: periplasmic solute binding protein; KEGG: acr:Acry_2369 periplasmic solute binding protein; periplasmic solute binding protein 313654..314643 Burkholderia phytofirmans PsJN 6280795 YP_001893942.1 CDS Bphyt_0293 NC_010681.1 314648 315469 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: acr:Acry_2368 ABC transporter; ABC transporter 314648..315469 Burkholderia phytofirmans PsJN 6280796 YP_001893943.1 CDS Bphyt_0294 NC_010681.1 315466 316386 D PFAM: ABC transporter; KEGG: acr:Acry_2367 ABC transporter; ABC transporter 315466..316386 Burkholderia phytofirmans PsJN 6280797 YP_001893944.1 CDS Bphyt_0295 NC_010681.1 316389 317201 D PFAM: ABC transporter; KEGG: acr:Acry_2366 ABC transporter; ABC transporter 316389..317201 Burkholderia phytofirmans PsJN 6281560 YP_001893945.1 CDS Bphyt_0296 NC_010681.1 317585 317776 R hypothetical protein complement(317585..317776) Burkholderia phytofirmans PsJN 6281561 YP_001893946.1 CDS Bphyt_0297 NC_010681.1 318484 318630 D hypothetical protein 318484..318630 Burkholderia phytofirmans PsJN 6281563 YP_001893947.1 CDS Bphyt_0298 NC_010681.1 318627 319364 D KEGG: rsq:Rsph17025_4400 hypothetical protein; hypothetical protein 318627..319364 Burkholderia phytofirmans PsJN 6281564 YP_001893948.1 CDS Bphyt_0299 NC_010681.1 319764 319988 D hypothetical protein 319764..319988 Burkholderia phytofirmans PsJN 6282448 YP_001893949.1 CDS Bphyt_0300 NC_010681.1 320259 321455 R PFAM: filamentation induced by cAMP protein Fic; KEGG: oan:Oant_0617 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic complement(320259..321455) Burkholderia phytofirmans PsJN 6282449 YP_001893950.1 CDS Bphyt_0301 NC_010681.1 322042 322446 D PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A4425 phenylacetic acid degradation-related protein; thioesterase superfamily protein 322042..322446 Burkholderia phytofirmans PsJN 6282451 YP_001893951.1 CDS Bphyt_0302 NC_010681.1 322482 323360 D PFAM: patatin; KEGG: bxe:Bxe_A4424 patatin-like phospholipase protein; patatin 322482..323360 Burkholderia phytofirmans PsJN 6282452 YP_001893952.1 CDS Bphyt_0303 NC_010681.1 323468 324481 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_A4423 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(323468..324481) Burkholderia phytofirmans PsJN 6284006 YP_001893953.1 CDS Bphyt_0304 NC_010681.1 324858 326714 D catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 324858..326714 Burkholderia phytofirmans PsJN 6284007 YP_001893954.1 CDS Bphyt_0305 NC_010681.1 327055 328158 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A4420 LysR family transcriptional regulator; LysR family transcriptional regulator 327055..328158 Burkholderia phytofirmans PsJN 6284008 YP_001893955.1 CDS Bphyt_0306 NC_010681.1 328319 330988 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(328319..330988) Burkholderia phytofirmans PsJN 6284009 YP_001893956.1 CDS Bphyt_0307 NC_010681.1 331226 331603 R PFAM: thioredoxin domain; KEGG: bxe:Bxe_A4418 thioredoxin protein; thioredoxin domain complement(331226..331603) Burkholderia phytofirmans PsJN 6284010 YP_001893957.1 CDS Bphyt_0308 NC_010681.1 331693 332961 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: bxe:Bxe_A4417 smf protein; DNA protecting protein DprA complement(331693..332961) Burkholderia phytofirmans PsJN 6284011 YP_001893958.1 CDS def NC_010681.1 333206 333709 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 333206..333709 Burkholderia phytofirmans PsJN 6284012 YP_001893959.1 CDS fmt NC_010681.1 333741 334727 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 333741..334727 Burkholderia phytofirmans PsJN 6283226 YP_001893960.1 CDS Bphyt_0311 NC_010681.1 334842 335486 D PFAM: lysine exporter (LYSE/YGGA); KEGG: bxe:Bxe_A4414 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA 334842..335486 Burkholderia phytofirmans PsJN 6283227 YP_001893961.1 CDS Bphyt_0312 NC_010681.1 335590 336447 D PFAM: peptidase M48 Ste24p; KEGG: bxe:Bxe_A4413 heat shock protein HtpX; M48 family peptidase 335590..336447 Burkholderia phytofirmans PsJN 6283228 YP_001893962.1 CDS Bphyt_0313 NC_010681.1 336814 338187 D TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: bxe:Bxe_A4412 Fmu, rRNA SAM-dependent methyltransferase; sun protein 336814..338187 Burkholderia phytofirmans PsJN 6283229 YP_001893963.1 CDS Bphyt_0314 NC_010681.1 338184 338783 D KEGG: bxe:Bxe_A4411 hypothetical protein; hypothetical protein 338184..338783 Burkholderia phytofirmans PsJN 6283230 YP_001893964.1 CDS Bphyt_0315 NC_010681.1 338785 341187 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: bxe:Bxe_A4410 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 338785..341187 Burkholderia phytofirmans PsJN 6283231 YP_001893965.1 CDS Bphyt_0316 NC_010681.1 341188 341877 D PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: bxe:Bxe_A4409 two component Fis family transcriptional regulator; two component Fis family transcriptional regulator 341188..341877 Burkholderia phytofirmans PsJN 6283265 YP_001893966.1 CDS Bphyt_0317 NC_010681.1 342450 343184 D TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: bxe:Bxe_A4407 ExsB; exsB protein 342450..343184 Burkholderia phytofirmans PsJN 6283267 YP_001893967.1 CDS Bphyt_0318 NC_010681.1 343247 343879 D PFAM: radical SAM protein; KEGG: bxe:Bxe_A4406 hypothetical protein; radical SAM protein 343247..343879 Burkholderia phytofirmans PsJN 6283268 YP_001893968.1 CDS Bphyt_0319 NC_010681.1 343886 344332 D TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bxe:Bxe_A4405 6-pyruvoyl tetrahydropterin synthase; queuosine biosynthesis protein QueD 343886..344332 Burkholderia phytofirmans PsJN 6283269 YP_001893969.1 CDS Bphyt_0320 NC_010681.1 344546 345328 D PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_A4404 2-dehydro-3-deoxyglucarate aldolase; 2-dehydro-3-deoxyglucarate aldolase 344546..345328 Burkholderia phytofirmans PsJN 6281547 YP_001893970.1 CDS Bphyt_0321 NC_010681.1 345325 346029 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: bxe:Bxe_A4403 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 345325..346029 Burkholderia phytofirmans PsJN 6281548 YP_001893971.1 CDS Bphyt_0322 NC_010681.1 346137 347285 R TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: bxe:Bxe_A4402 rod shape-determining protein, RodA; rod shape-determining protein RodA complement(346137..347285) Burkholderia phytofirmans PsJN 6281549 YP_001893972.1 CDS Bphyt_0323 NC_010681.1 347296 349611 R KEGG: bxe:Bxe_A4401 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 complement(347296..349611) Burkholderia phytofirmans PsJN 6281550 YP_001893973.1 CDS Bphyt_0324 NC_010681.1 349754 350266 R TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: bxe:Bxe_A4400 rod shape-determining protein MreD; rod shape-determining protein MreD complement(349754..350266) Burkholderia phytofirmans PsJN 6281551 YP_001893974.1 CDS Bphyt_0325 NC_010681.1 350263 351372 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(350263..351372) Burkholderia phytofirmans PsJN 6281552 YP_001893975.1 CDS Bphyt_0326 NC_010681.1 351526 352569 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(351526..352569) Burkholderia phytofirmans PsJN 6281553 YP_001893976.1 CDS gatC NC_010681.1 352950 353249 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 352950..353249 Burkholderia phytofirmans PsJN 6281813 YP_001893977.1 CDS gatA NC_010681.1 353443 354930 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 353443..354930 Burkholderia phytofirmans PsJN 6281814 YP_001893978.1 CDS gatB NC_010681.1 354936 356411 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 354936..356411 Burkholderia phytofirmans PsJN 6281815 YP_001893979.1 CDS Bphyt_0330 NC_010681.1 356552 357391 D PFAM: protein of unknown function DUF344; KEGG: bxe:Bxe_A4394 hypothetical protein; hypothetical protein 356552..357391 Burkholderia phytofirmans PsJN 6281816 YP_001893980.1 CDS Bphyt_0331 NC_010681.1 357436 358215 D KEGG: bxe:Bxe_A4393 exodeoxyribonucleaseIII xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 357436..358215 Burkholderia phytofirmans PsJN 6281817 YP_001893981.1 CDS Bphyt_0332 NC_010681.1 358342 359610 R PFAM: peptidase M48 Ste24p; KEGG: bxe:Bxe_A4392 hypothetical protein; peptidase M48 Ste24p complement(358342..359610) Burkholderia phytofirmans PsJN 6281818 YP_001893982.1 CDS Bphyt_0333 NC_010681.1 359625 361019 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4390 major facilitator superfamily (MFS)muropeptide transporter; major facilitator superfamily protein complement(359625..361019) Burkholderia phytofirmans PsJN 6283174 YP_001893983.1 CDS Bphyt_0334 NC_010681.1 361034 361642 R TIGRFAM: methionine biosynthesis protein MetW; PFAM: methionine biosynthesis MetW protein; methyltransferase type 11; KEGG: bxe:Bxe_A4389 hypothetical protein; methionine biosynthesis protein MetW complement(361034..361642) Burkholderia phytofirmans PsJN 6283175 YP_001893984.1 CDS metX NC_010681.1 361639 362784 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(361639..362784) Burkholderia phytofirmans PsJN 6283176 YP_001893985.1 CDS slmA NC_010681.1 363108 363791 R FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein complement(363108..363791) Burkholderia phytofirmans PsJN 6283177 YP_001893986.1 CDS Bphyt_0337 NC_010681.1 363758 364561 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_A4386 HAD-superfamily hydrolase, subfamily IA, variant3; pyrimidine 5'-nucleotidase complement(363758..364561) Burkholderia phytofirmans PsJN 6283178 YP_001893987.1 CDS Bphyt_0338 NC_010681.1 364789 365688 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(364789..365688) Burkholderia phytofirmans PsJN 6283179 YP_001893988.1 CDS Bphyt_0339 NC_010681.1 366358 367995 R PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: bxe:Bxe_A4384 hypothetical protein; hypothetical protein complement(366358..367995) Burkholderia phytofirmans PsJN 6282578 YP_001893989.1 CDS Bphyt_0340 NC_010681.1 368130 369440 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A4383 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 368130..369440 Burkholderia phytofirmans PsJN 6282579 YP_001893990.1 CDS Bphyt_0341 NC_010681.1 369437 369979 D PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: bxe:Bxe_A4382 two component Fis family transcriptional regulator; two component Fis family transcriptional regulator 369437..369979 Burkholderia phytofirmans PsJN 6282580 YP_001893991.1 CDS hslU NC_010681.1 370123 371469 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(370123..371469) Burkholderia phytofirmans PsJN 6282581 YP_001893992.1 CDS Bphyt_0343 NC_010681.1 371479 372015 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(371479..372015) Burkholderia phytofirmans PsJN 6282582 YP_001893993.1 CDS Bphyt_0344 NC_010681.1 372494 372913 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: bxe:Bxe_A4379 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator complement(372494..372913) Burkholderia phytofirmans PsJN 6282583 YP_001893994.1 CDS Bphyt_0345 NC_010681.1 373591 374679 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_A4377 hypothetical protein; cobalamin synthesis protein P47K complement(373591..374679) Burkholderia phytofirmans PsJN 6282584 YP_001893995.1 CDS Bphyt_0346 NC_010681.1 374870 376072 R SMART: PUA domain containing protein; KEGG: bxe:Bxe_A4376 hypothetical protein; PUA domain containing protein complement(374870..376072) Burkholderia phytofirmans PsJN 6281339 YP_001893996.1 CDS xerC NC_010681.1 376167 377090 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC complement(376167..377090) Burkholderia phytofirmans PsJN 6281340 YP_001893997.1 CDS Bphyt_0348 NC_010681.1 377135 377857 R PFAM: protein of unknown function DUF484; KEGG: bxe:Bxe_A4374 hypothetical protein; hypothetical protein complement(377135..377857) Burkholderia phytofirmans PsJN 6281341 YP_001893998.1 CDS dapF NC_010681.1 377915 378814 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(377915..378814) Burkholderia phytofirmans PsJN 6281342 YP_001893999.1 CDS Bphyt_0350 NC_010681.1 378909 379793 R acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(378909..379793) Burkholderia phytofirmans PsJN 6281343 YP_001894000.1 CDS Bphyt_0351 NC_010681.1 380071 381261 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 380071..381261 Burkholderia phytofirmans PsJN 6281344 YP_001894001.1 CDS Bphyt_0352 NC_010681.1 381442 381807 R KEGG: bxe:Bxe_A4370 hypothetical protein; hypothetical protein complement(381442..381807) Burkholderia phytofirmans PsJN 6283409 YP_001894002.1 CDS Bphyt_0353 NC_010681.1 382269 383030 D PFAM: phytanoyl-CoA dioxygenase; KEGG: bxe:Bxe_A4369 hypothetical protein; phytanoyl-CoA dioxygenase 382269..383030 Burkholderia phytofirmans PsJN 6283410 YP_001894003.1 CDS Bphyt_0354 NC_010681.1 383120 383326 R KEGG: bxe:Bxe_A4368 hypothetical protein; hypothetical protein complement(383120..383326) Burkholderia phytofirmans PsJN 6283411 YP_001894004.1 CDS Bphyt_0355 NC_010681.1 383542 384585 D PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A4367 aldo/keto reductase; aldo/keto reductase 383542..384585 Burkholderia phytofirmans PsJN 6283412 YP_001894005.1 CDS Bphyt_0356 NC_010681.1 384651 384836 R KEGG: bxe:Bxe_A4366 hypothetical protein; hypothetical protein complement(384651..384836) Burkholderia phytofirmans PsJN 6283413 YP_001894006.1 CDS Bphyt_0357 NC_010681.1 385109 386404 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4365 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(385109..386404) Burkholderia phytofirmans PsJN 6283414 YP_001894007.1 CDS Bphyt_0358 NC_010681.1 386553 388082 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A4364 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein complement(386553..388082) Burkholderia phytofirmans PsJN 6283548 YP_001894008.1 CDS Bphyt_0359 NC_010681.1 388079 389284 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: bxe:Bxe_A4363 RND efflux pump, membrane fusion protein, CzcB subfamily; RND family efflux transporter MFP subunit complement(388079..389284) Burkholderia phytofirmans PsJN 6283549 YP_001894009.1 CDS Bphyt_0360 NC_010681.1 389373 392555 R PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A4362 cation/multidrug efflux pump, AcrB/AcrD/AcrF family, RND superfamily; acriflavin resistance protein complement(389373..392555) Burkholderia phytofirmans PsJN 6283550 YP_001894010.1 CDS Bphyt_0361 NC_010681.1 392983 393195 D KEGG: bxe:Bxe_A4361 hypothetical protein; hypothetical protein 392983..393195 Burkholderia phytofirmans PsJN 6283551 YP_001894011.1 CDS Bphyt_0362 NC_010681.1 393311 394339 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 393311..394339 Burkholderia phytofirmans PsJN 6283552 YP_001894012.1 CDS Bphyt_0363 NC_010681.1 394367 396268 R KEGG: bxe:Bxe_A4359 hypothetical protein; hypothetical protein complement(394367..396268) Burkholderia phytofirmans PsJN 6283553 YP_001894013.1 CDS Bphyt_0364 NC_010681.1 396373 397395 R PFAM: protein of unknown function DUF182; KEGG: bxe:Bxe_A4357 hypothetical protein; hypothetical protein complement(396373..397395) Burkholderia phytofirmans PsJN 6283554 YP_001894014.1 CDS Bphyt_0365 NC_010681.1 397368 397964 R PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bxe:Bxe_A4356 carbon monoxide dehydrogenase, CoxG subunit; carbon monoxide dehydrogenase subunit G complement(397368..397964) Burkholderia phytofirmans PsJN 6284065 YP_001894015.1 CDS Bphyt_0366 NC_010681.1 397955 399337 R PFAM: VWA containing CoxE family protein; KEGG: bxe:Bxe_A4355 carbon monoxide dehydrogenase, CoxE subunit; VWA containing CoxE family protein complement(397955..399337) Burkholderia phytofirmans PsJN 6284066 YP_001894016.1 CDS Bphyt_0367 NC_010681.1 399343 400230 R PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: bxe:Bxe_A4354 ATPase; ATPase AAA complement(399343..400230) Burkholderia phytofirmans PsJN 6284067 YP_001894017.1 CDS Bphyt_0368 NC_010681.1 400360 401157 R PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bxe:Bxe_A4353 carbon monoxide dehydrogenase, medium subunit (CoxM); molybdopterin dehydrogenase complement(400360..401157) Burkholderia phytofirmans PsJN 6284068 YP_001894018.1 CDS Bphyt_0369 NC_010681.1 401180 403561 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_A4352 carbon-monoxide dehydrogenase form II, large subunit; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(401180..403561) Burkholderia phytofirmans PsJN 6284069 YP_001894019.1 CDS Bphyt_0370 NC_010681.1 403572 404090 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_A4351 carbon-monoxide dehydrogenase, small subunit (CoxS); (2Fe-2S)-binding domain-containing protein complement(403572..404090) Burkholderia phytofirmans PsJN 6284070 YP_001894020.1 CDS Bphyt_0371 NC_010681.1 404469 404813 R KEGG: ppr:PBPRB0660 hypothetical protein; hypothetical protein complement(404469..404813) Burkholderia phytofirmans PsJN 6284284 YP_001894021.1 CDS Bphyt_0372 NC_010681.1 404810 405178 R KEGG: plu:plu2153 hypothetical protein; hypothetical protein complement(404810..405178) Burkholderia phytofirmans PsJN 6284285 YP_001894022.1 CDS Bphyt_0373 NC_010681.1 405554 406945 R PFAM: amino acid permease-associated region; KEGG: bxe:Bxe_A4348 basic amino acid transporter CAT family, APC superfamily; amino acid permease-associated protein complement(405554..406945) Burkholderia phytofirmans PsJN 6284286 YP_001894023.1 CDS Bphyt_0374 NC_010681.1 407240 407896 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_A4347 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(407240..407896) Burkholderia phytofirmans PsJN 6284287 YP_001894024.1 CDS Bphyt_0375 NC_010681.1 407907 408785 R PFAM: ATP-binding region ATPase domain protein; KEGG: bxe:Bxe_A4346 signal transduction histidine kinase; signal transduction histidine kinase complement(407907..408785) Burkholderia phytofirmans PsJN 6284288 YP_001894025.1 CDS Bphyt_0376 NC_010681.1 409220 409990 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: bxe:Bxe_A4345 ferredoxin--NADP reductase; ferredoxin--NADP(+) reductase complement(409220..409990) Burkholderia phytofirmans PsJN 6284289 YP_001894026.1 CDS Bphyt_0377 NC_010681.1 410237 410368 R KEGG: bxe:Bxe_A4344 hypothetical protein; hypothetical protein complement(410237..410368) Burkholderia phytofirmans PsJN 6283628 YP_001894027.1 CDS Bphyt_0378 NC_010681.1 410690 411649 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A4343 ABC sugar transporter inner membrane subunit; sugar ABC transporter ATPase complement(410690..411649) Burkholderia phytofirmans PsJN 6283629 YP_001894028.1 CDS Bphyt_0379 NC_010681.1 411696 412733 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A4342 ABC sugar transporter inner membrane subunit; sugar ABC transporter ATPase complement(411696..412733) Burkholderia phytofirmans PsJN 6283630 YP_001894029.1 CDS Bphyt_0380 NC_010681.1 412723 414357 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A4341 ABC sugar transporter fused ATPases; ABC transporter complement(412723..414357) Burkholderia phytofirmans PsJN 6283631 YP_001894030.1 CDS Bphyt_0381 NC_010681.1 414729 415748 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A4340 ABC sugar transporter periplasmic ligand binding protein; sugar ABC transporter substrate-binding protein complement(414729..415748) Burkholderia phytofirmans PsJN 6283632 YP_001894031.1 CDS Bphyt_0382 NC_010681.1 415862 416944 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A4339 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(415862..416944) Burkholderia phytofirmans PsJN 6283633 YP_001894032.1 CDS Bphyt_0383 NC_010681.1 417325 418233 D PFAM: aldose 1-epimerase; KEGG: bxe:Bxe_A4338 hypothetical protein; aldose 1-epimerase 417325..418233 Burkholderia phytofirmans PsJN 6283634 YP_001894033.1 CDS Bphyt_0384 NC_010681.1 418275 419072 R PFAM: endonuclease/exonuclease/phosphatase; KEGG: bxe:Bxe_A4337 metal-dependent hydrolase; endonuclease/exonuclease/phosphatase complement(418275..419072) Burkholderia phytofirmans PsJN 6282109 YP_001894034.1 CDS Bphyt_0385 NC_010681.1 419161 419700 R KEGG: bxe:Bxe_A4336 hypothetical protein; hypothetical protein complement(419161..419700) Burkholderia phytofirmans PsJN 6282110 YP_001894035.1 CDS Bphyt_0386 NC_010681.1 419981 420946 D PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: bxe:Bxe_A4335 ATP-dependent protease La; ATPase AAA 419981..420946 Burkholderia phytofirmans PsJN 6282111 YP_001894036.1 CDS Bphyt_0387 NC_010681.1 421365 422471 D PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_A4334 FAD dependent oxidoreductase; FAD dependent oxidoreductase 421365..422471 Burkholderia phytofirmans PsJN 6282112 YP_001894037.1 CDS Bphyt_0388 NC_010681.1 422750 423061 D PFAM: High potential iron-sulfur protein; KEGG: bxe:Bxe_A4333 high potential iron-sulfur protein; high potential iron-sulfur protein 422750..423061 Burkholderia phytofirmans PsJN 6282113 YP_001894038.1 CDS Bphyt_0389 NC_010681.1 423297 424589 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4332 major facilitator superfamily (MFS) metabolite/H+ symporter; general substrate transporter 423297..424589 Burkholderia phytofirmans PsJN 6282114 YP_001894039.1 CDS Bphyt_0390 NC_010681.1 424698 426218 R PFAM: amidase; KEGG: bxe:Bxe_A4331 amidase; amidase complement(424698..426218) Burkholderia phytofirmans PsJN 6282310 YP_001894040.1 CDS Bphyt_0391 NC_010681.1 426503 427201 R PFAM: dienelactone hydrolase; KEGG: bxe:Bxe_A4330 carboxymethylenebutenolidase; carboxymethylenebutenolidase complement(426503..427201) Burkholderia phytofirmans PsJN 6282311 YP_001894041.1 CDS Bphyt_0392 NC_010681.1 427454 428554 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: bxe:Bxe_A4328 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 427454..428554 Burkholderia phytofirmans PsJN 6282312 YP_001894042.1 CDS Bphyt_0393 NC_010681.1 428978 430123 D PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A4327 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched chain amino acid ABC transporter substrate-binding protein 428978..430123 Burkholderia phytofirmans PsJN 6282313 YP_001894043.1 CDS Bphyt_0394 NC_010681.1 430256 431272 D SMART: transcription factor jumonji jmjC domain protein; KEGG: bxe:Bxe_A4326 hypothetical protein; transcription factor jumonji jmjC domain-containing protein 430256..431272 Burkholderia phytofirmans PsJN 6282314 YP_001894044.1 CDS Bphyt_0395 NC_010681.1 431437 432873 R KEGG: bxe:Bxe_A4325 hemagglutinin-related transmembrane protein; hemagglutinin-related transmembrane protein complement(431437..432873) Burkholderia phytofirmans PsJN 6282315 YP_001894045.1 CDS Bphyt_0396 NC_010681.1 433133 434254 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4324 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(433133..434254) Burkholderia phytofirmans PsJN 6282873 YP_001894046.1 CDS Bphyt_0397 NC_010681.1 434537 435199 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bxe:Bxe_A4323 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 434537..435199 Burkholderia phytofirmans PsJN 6282874 YP_001894047.1 CDS Bphyt_0398 NC_010681.1 435598 435900 D PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_A4321 HNS-like transcriptional regulator; histone family protein nucleoid-structuring protein H-NS 435598..435900 Burkholderia phytofirmans PsJN 6282875 YP_001894048.1 CDS Bphyt_0399 NC_010681.1 436231 437487 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bxe:Bxe_A4320 cation (Co++/Zn++/Cd++) efflux protein; cation diffusion facilitator family transporter 436231..437487 Burkholderia phytofirmans PsJN 6282876 YP_001894049.1 CDS Bphyt_0400 NC_010681.1 437549 438007 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_A4319 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(437549..438007) Burkholderia phytofirmans PsJN 6282877 YP_001894050.1 CDS Bphyt_0401 NC_010681.1 438098 438727 R KEGG: bxe:Bxe_A4318 hypothetical protein; hypothetical protein complement(438098..438727) Burkholderia phytofirmans PsJN 6282878 YP_001894051.1 CDS Bphyt_0402 NC_010681.1 438724 439368 R PFAM: beta-lactamase; KEGG: bxe:Bxe_A4317 metallo-beta-lactamase family protein; beta-lactamase complement(438724..439368) Burkholderia phytofirmans PsJN 6282879 YP_001894052.1 CDS Bphyt_0403 NC_010681.1 440007 440609 D TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bxe:Bxe_A4315 lipoprotein A; lipoprotein A 440007..440609 Burkholderia phytofirmans PsJN 6281175 YP_001894053.1 CDS Bphyt_0404 NC_010681.1 440739 441620 R PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bxe:Bxe_A4314 protein of unknown function UPF0011; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase complement(440739..441620) Burkholderia phytofirmans PsJN 6281176 YP_001894054.1 CDS Bphyt_0405 NC_010681.1 441658 442122 D PFAM: protein of unknown function UPF0102; KEGG: bxe:Bxe_A4313 protein of unknown function UPF0102; hypothetical protein 441658..442122 Burkholderia phytofirmans PsJN 6281177 YP_001894055.1 CDS Bphyt_0406 NC_010681.1 442339 442926 D TIGRFAM: phosphoheptose isomerase; KEGG: bxe:Bxe_A4312 phosphoheptose isomerase; phosphoheptose isomerase 442339..442926 Burkholderia phytofirmans PsJN 6281178 YP_001894056.1 CDS Bphyt_0407 NC_010681.1 442953 443750 D PFAM: transport-associated; SMART: transport-associated and nodulation region; KEGG: bxe:Bxe_A4311 periplasmic phospholipid binding protein; transport-associated 442953..443750 Burkholderia phytofirmans PsJN 6281179 YP_001894057.1 CDS Bphyt_0408 NC_010681.1 443747 444097 D PFAM: cytochrome C class I; KEGG: bxe:Bxe_A4310 cytochrome C, class I; cytochrome C class I 443747..444097 Burkholderia phytofirmans PsJN 6281180 YP_001894058.1 CDS Bphyt_0409 NC_010681.1 444400 446157 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A4301 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(444400..446157) Burkholderia phytofirmans PsJN 6284223 YP_001894059.1 CDS Bphyt_0410 NC_010681.1 446787 448337 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_A4297 diguanylate cyclase (GGDEF domain); diguanylate cyclase 446787..448337 Burkholderia phytofirmans PsJN 6284224 YP_001894060.1 CDS Bphyt_0411 NC_010681.1 448426 449049 D KEGG: rme:Rmet_1569 hypothetical protein; hypothetical protein 448426..449049 Burkholderia phytofirmans PsJN 6284225 YP_001894061.1 CDS Bphyt_0412 NC_010681.1 449472 451037 D PFAM: chemotaxis sensory transducer; KEGG: reu:Reut_B5602 histidine kinase, HAMP region:bacterial chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 449472..451037 Burkholderia phytofirmans PsJN 6284226 YP_001894062.1 CDS Bphyt_0413 NC_010681.1 451370 452677 D TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: bxe:Bxe_A4294 nucleobase/cation symporter, (NCS2) family; uracil-xanthine permease 451370..452677 Burkholderia phytofirmans PsJN 6284699 YP_001894063.1 CDS Bphyt_0414 NC_010681.1 452811 454466 R TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_A4293 Na+/H+ antiporter, CPA1 family; Na+/H+ antiporter complement(452811..454466) Burkholderia phytofirmans PsJN 6284700 YP_001894064.1 CDS Bphyt_0415 NC_010681.1 454840 456108 D PFAM: EAL domain protein; KEGG: bxe:Bxe_A4292 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 454840..456108 Burkholderia phytofirmans PsJN 6284701 YP_001894065.1 CDS Bphyt_0416 NC_010681.1 456153 456848 D PFAM: CutC family protein; KEGG: bxe:Bxe_A4291 copper homeostasis protein CutC; CutC family protein 456153..456848 Burkholderia phytofirmans PsJN 6284702 YP_001894066.1 CDS Bphyt_0417 NC_010681.1 456944 460531 R catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoacid ferredoxin oxidoreductase complement(456944..460531) Burkholderia phytofirmans PsJN 6284703 YP_001894067.1 CDS Bphyt_0418 NC_010681.1 460835 463273 R TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: rso:RSc1775 probable hemagglutinin-related protein; filamentous hemagglutinin family outer membrane protein complement(460835..463273) Burkholderia phytofirmans PsJN 6284704 YP_001894068.1 CDS Bphyt_0419 NC_010681.1 463326 465038 R PFAM: Hemolysin activator HlyB domain protein; polypeptide-transport-associated domain protein ShlB-type; KEGG: rso:RSc1779 probable activation/secretion signal peptide protein; polypeptide-transport-associated domain-containing protein complement(463326..465038) Burkholderia phytofirmans PsJN 6284705 YP_001894069.1 CDS Bphyt_0420 NC_010681.1 465161 466120 R PFAM: ion transport 2 domain protein ; K channel inward rectifier conserved region 2 domain protein; KEGG: bxe:Bxe_A4289 inward rectifier potassium channel; K channel inward rectifier domain-containing protein complement(465161..466120) Burkholderia phytofirmans PsJN 6283509 YP_001894070.1 CDS Bphyt_0421 NC_010681.1 466452 466697 R KEGG: bxe:Bxe_A4288 hypothetical protein; hypothetical protein complement(466452..466697) Burkholderia phytofirmans PsJN 6283510 YP_001894071.1 CDS Bphyt_0422 NC_010681.1 466778 467008 R KEGG: bxe:Bxe_A4287 hypothetical protein; hypothetical protein complement(466778..467008) Burkholderia phytofirmans PsJN 6283511 YP_001894072.1 CDS Bphyt_0423 NC_010681.1 467130 468047 R PFAM: PfkB domain protein; KEGG: bxe:Bxe_A4286 carbohydrate kinase; PfkB domain-containing protein complement(467130..468047) Burkholderia phytofirmans PsJN 6283512 YP_001894073.1 CDS Bphyt_0424 NC_010681.1 468044 469327 R PFAM: N-acylglucosamine 2-epimerase; KEGG: bxe:Bxe_A4285 N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase complement(468044..469327) Burkholderia phytofirmans PsJN 6283513 YP_001894074.1 CDS Bphyt_0425 NC_010681.1 469324 470310 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A4284 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(469324..470310) Burkholderia phytofirmans PsJN 6283514 YP_001894075.1 CDS Bphyt_0426 NC_010681.1 470506 472356 R PFAM: GGDEF domain containing protein; hypothetical protein; EAL domain protein; KEGG: bxe:Bxe_A4283 diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase complement(470506..472356) Burkholderia phytofirmans PsJN 6282911 YP_001894076.1 CDS Bphyt_0427 NC_010681.1 472648 473676 R PFAM: sodium symporter; KEGG: bxe:Bxe_A4282 sodium/bile acid symporter family protein; sodium symporter complement(472648..473676) Burkholderia phytofirmans PsJN 6282912 YP_001894077.1 CDS Bphyt_0428 NC_010681.1 474146 474784 D KEGG: bxe:Bxe_A4280 hypothetical protein; hypothetical protein 474146..474784 Burkholderia phytofirmans PsJN 6282913 YP_001894078.1 CDS Bphyt_0429 NC_010681.1 475485 476570 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A4279 outer membrane porin, OmpC family; porin 475485..476570 Burkholderia phytofirmans PsJN 6282914 YP_001894079.1 CDS Bphyt_0430 NC_010681.1 476776 477714 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A4278 LysR family transcriptional regulator; LysR family transcriptional regulator 476776..477714 Burkholderia phytofirmans PsJN 6282915 YP_001894080.1 CDS Bphyt_0431 NC_010681.1 477797 481693 D KEGG: bxe:Bxe_A4277 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: ArgK protein; methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 477797..481693 Burkholderia phytofirmans PsJN 6282916 YP_001894081.1 CDS Bphyt_0432 NC_010681.1 481918 482877 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: bxe:Bxe_A4276 2-nitropropane dioxygenase; 2-nitropropane dioxygenase complement(481918..482877) Burkholderia phytofirmans PsJN 6283602 YP_001894082.1 CDS Bphyt_0433 NC_010681.1 483161 484051 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A4275 hydrolase; alpha/beta fold family hydrolase 483161..484051 Burkholderia phytofirmans PsJN 6283603 YP_001894083.1 CDS Bphyt_0434 NC_010681.1 484117 484587 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bpl:BURPS1106A_0360 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(484117..484587) Burkholderia phytofirmans PsJN 6283604 YP_001894084.1 CDS Bphyt_0435 NC_010681.1 484702 485601 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcm:Bcenmc03_2983 protein of unknown function DUF6 transmembrane; hypothetical protein 484702..485601 Burkholderia phytofirmans PsJN 6283605 YP_001894085.1 CDS Bphyt_0436 NC_010681.1 485916 486836 R PFAM: beta-lactamase; KEGG: bxe:Bxe_A4274 metallo-beta-lactamase superfamily protein; beta-lactamase complement(485916..486836) Burkholderia phytofirmans PsJN 6283606 YP_001894086.1 CDS Bphyt_0437 NC_010681.1 486833 487324 R PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_A4273 hypothetical protein; MaoC domain-containing protein dehydratase complement(486833..487324) Burkholderia phytofirmans PsJN 6283607 YP_001894087.1 CDS Bphyt_0438 NC_010681.1 487321 487560 R PFAM: protein of unknown function DUF1289; KEGG: bxe:Bxe_A4272 hypothetical protein; hypothetical protein complement(487321..487560) Burkholderia phytofirmans PsJN 6283608 YP_001894088.1 CDS Bphyt_0439 NC_010681.1 487565 488086 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bxe:Bxe_A4271 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(487565..488086) Burkholderia phytofirmans PsJN 6282056 YP_001894089.1 CDS Bphyt_0440 NC_010681.1 488141 489067 R catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase complement(488141..489067) Burkholderia phytofirmans PsJN 6282057 YP_001894090.1 CDS Bphyt_0441 NC_010681.1 489128 490069 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_A4269 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(489128..490069) Burkholderia phytofirmans PsJN 6282058 YP_001894091.1 CDS Bphyt_0442 NC_010681.1 490417 491019 D PFAM: protein of unknown function DUF1234; KEGG: bxe:Bxe_A4268 hypothetical protein; hypothetical protein 490417..491019 Burkholderia phytofirmans PsJN 6282059 YP_001894092.1 CDS Bphyt_0443 NC_010681.1 491156 492181 D TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A4267 ABC sulfate transporter periplasmic ligand binding protein; sulfate ABC transporter substrate-binding protein 491156..492181 Burkholderia phytofirmans PsJN 6282060 YP_001894093.1 CDS Bphyt_0444 NC_010681.1 492275 493360 R KEGG: bxe:Bxe_A4266 biotin synthase; TIGRFAM: biotin synthase; PFAM: radical SAM protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(492275..493360) Burkholderia phytofirmans PsJN 6282061 YP_001894094.1 CDS bioD NC_010681.1 493394 494137 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(493394..494137) Burkholderia phytofirmans PsJN 6283615 YP_001894095.1 CDS Bphyt_0446 NC_010681.1 494134 495318 R catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase complement(494134..495318) Burkholderia phytofirmans PsJN 6283616 YP_001894096.1 CDS Bphyt_0447 NC_010681.1 495318 496736 R catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(495318..496736) Burkholderia phytofirmans PsJN 6283617 YP_001894097.1 CDS Bphyt_0448 NC_010681.1 497269 499155 D TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bpd:BURPS668_A0339 hypothetical protein; type VI secretion protein 497269..499155 Burkholderia phytofirmans PsJN 6283618 YP_001894098.1 CDS Bphyt_0449 NC_010681.1 499197 501719 D TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bxe:Bxe_B2595 rhs element Vgr protein; ImpA family type VI secretion-associated protein 499197..501719 Burkholderia phytofirmans PsJN 6283619 YP_001894099.1 CDS Bphyt_0450 NC_010681.1 501746 502372 D KEGG: bam:Bamb_0208 hypothetical protein; hypothetical protein 501746..502372 Burkholderia phytofirmans PsJN 6283620 YP_001894100.1 CDS Bphyt_0451 NC_010681.1 502380 503165 D KEGG: bam:Bamb_0208 hypothetical protein; hypothetical protein 502380..503165 Burkholderia phytofirmans PsJN 6281351 YP_001894101.1 CDS Bphyt_0452 NC_010681.1 503162 503995 D KEGG: bam:Bamb_0208 hypothetical protein; hypothetical protein 503162..503995 Burkholderia phytofirmans PsJN 6281352 YP_001894102.1 CDS Bphyt_0453 NC_010681.1 504060 504725 D KEGG: bam:Bamb_0208 hypothetical protein; hypothetical protein 504060..504725 Burkholderia phytofirmans PsJN 6281353 YP_001894103.1 CDS Bphyt_0454 NC_010681.1 504722 506923 D KEGG: bam:Bamb_0209 hypothetical protein; hypothetical protein 504722..506923 Burkholderia phytofirmans PsJN 6281354 YP_001894104.1 CDS Bphyt_0455 NC_010681.1 506965 507855 D KEGG: bam:Bamb_0210 hypothetical protein; hypothetical protein 506965..507855 Burkholderia phytofirmans PsJN 6281355 YP_001894105.1 CDS Bphyt_0456 NC_010681.1 507911 509188 R KEGG: bxe:Bxe_A4260 hypothetical protein; hypothetical protein complement(507911..509188) Burkholderia phytofirmans PsJN 6281356 YP_001894106.1 CDS Bphyt_0457 NC_010681.1 509474 509788 D KEGG: bxe:Bxe_A4259 hypothetical protein; hypothetical protein 509474..509788 Burkholderia phytofirmans PsJN 6283736 YP_001894107.1 CDS Bphyt_0458 NC_010681.1 509761 510210 R KEGG: bxe:Bxe_A4258 hypothetical protein; hypothetical protein complement(509761..510210) Burkholderia phytofirmans PsJN 6283737 YP_001894108.1 CDS Bphyt_0459 NC_010681.1 510218 511348 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A4257 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(510218..511348) Burkholderia phytofirmans PsJN 6283738 YP_001894109.1 CDS Bphyt_0460 NC_010681.1 511376 512053 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A4256 short chain dehydrogenase; short chain dehydrogenase complement(511376..512053) Burkholderia phytofirmans PsJN 6283739 YP_001894110.1 CDS Bphyt_0461 NC_010681.1 512101 513294 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(512101..513294) Burkholderia phytofirmans PsJN 6283740 YP_001894111.1 CDS Bphyt_0462 NC_010681.1 513287 514063 R PFAM: carbonic anhydrase; KEGG: bxe:Bxe_A4254 carbonic anhydrase; carbonate dehydratase complement(513287..514063) Burkholderia phytofirmans PsJN 6283741 YP_001894112.1 CDS aceK NC_010681.1 514158 515996 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase complement(514158..515996) Burkholderia phytofirmans PsJN 6281571 YP_001894113.1 CDS Bphyt_0464 NC_010681.1 516082 516486 R PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; KEGG: bxe:Bxe_A4252 MerR family transcriptional regulator; MerR family transcriptional regulator complement(516082..516486) Burkholderia phytofirmans PsJN 6281572 YP_001894114.1 CDS Bphyt_0465 NC_010681.1 516674 517747 D PFAM: beta-lactamase; KEGG: bxe:Bxe_A4251 metallo-beta-lactamase superfamily protein; beta-lactamase 516674..517747 Burkholderia phytofirmans PsJN 6281573 YP_001894115.1 CDS Bphyt_0466 NC_010681.1 517824 518285 R KEGG: pfl:PFL_5499 periplasmic protein; hypothetical protein complement(517824..518285) Burkholderia phytofirmans PsJN 6281574 YP_001894116.1 CDS Bphyt_0467 NC_010681.1 518292 518660 R KEGG: pfl:PFL_5498 cytoplasmic protein; hypothetical protein complement(518292..518660) Burkholderia phytofirmans PsJN 6281575 YP_001894117.1 CDS Bphyt_0468 NC_010681.1 518904 520490 R PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A4250 ABC peptide transporter periplasmic ligand binding protein; family 5 extracellular solute-binding protein complement(518904..520490) Burkholderia phytofirmans PsJN 6281576 YP_001894118.1 CDS Bphyt_0469 NC_010681.1 520757 521575 R PFAM: periplasmic binding protein; KEGG: bxe:Bxe_A4249 ABC Fe+3/siderophore transporter periplasmic ligand binding protein; periplasmic binding protein complement(520757..521575) Burkholderia phytofirmans PsJN 6284656 YP_001894119.1 CDS Bphyt_0470 NC_010681.1 521579 522358 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A4248 short chain dehydrogenase; short chain dehydrogenase complement(521579..522358) Burkholderia phytofirmans PsJN 6284657 YP_001894120.1 CDS Bphyt_0471 NC_010681.1 522374 523012 R PFAM: DSBA oxidoreductase; KEGG: bxe:Bxe_A4247 thiol-disulfide interchange protein; DSBA oxidoreductase complement(522374..523012) Burkholderia phytofirmans PsJN 6284658 YP_001894121.1 CDS Bphyt_0472 NC_010681.1 523185 524009 R PFAM: sporulation domain protein; KEGG: bxe:Bxe_A4246 hypothetical protein; sporulation domain-containing protein complement(523185..524009) Burkholderia phytofirmans PsJN 6284659 YP_001894122.1 CDS argS NC_010681.1 524071 525861 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(524071..525861) Burkholderia phytofirmans PsJN 6284660 YP_001894123.1 CDS Bphyt_0474 NC_010681.1 526304 526630 D PFAM: Domain of unknown function DUF1840; KEGG: bxe:Bxe_A4244 hypothetical protein; hypothetical protein 526304..526630 Burkholderia phytofirmans PsJN 6284661 YP_001894124.1 CDS Bphyt_0475 NC_010681.1 526773 526982 R KEGG: cvi:CV_4241 probable acid shock protein; acid shock protein complement(526773..526982) Burkholderia phytofirmans PsJN 6281114 YP_001894125.1 CDS Bphyt_0476 NC_010681.1 527142 529859 R KEGG: bxe:Bxe_A4243 5-methyltetrahydrofolate--homocysteineS-methyltransferase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; methionine synthase complement(527142..529859) Burkholderia phytofirmans PsJN 6281115 YP_001894126.1 CDS Bphyt_0477 NC_010681.1 529946 531016 R PFAM: homocysteine S-methyltransferase; KEGG: bxe:Bxe_A4240 homocysteine S-methyltransferase; homocysteine S-methyltransferase complement(529946..531016) Burkholderia phytofirmans PsJN 6281116 YP_001894127.1 CDS Bphyt_0478 NC_010681.1 531303 531560 R KEGG: bxe:Bxe_A4239 hypothetical protein; hypothetical protein complement(531303..531560) Burkholderia phytofirmans PsJN 6281117 YP_001894128.1 CDS Bphyt_0479 NC_010681.1 531679 532467 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A4238 3-oxoadipate enol-lactonase; alpha/beta fold family hydrolase complement(531679..532467) Burkholderia phytofirmans PsJN 6281118 YP_001894129.1 CDS Bphyt_0480 NC_010681.1 532651 533958 R KEGG: bxe:Bxe_A4237 hypothetical protein; hypothetical protein complement(532651..533958) Burkholderia phytofirmans PsJN 6281119 YP_001894130.1 CDS Bphyt_0481 NC_010681.1 534240 535142 R PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: bxe:Bxe_A4236 IclR family transcriptional regulator; IclR family transcriptional regulator complement(534240..535142) Burkholderia phytofirmans PsJN 6283709 YP_001894131.1 CDS Bphyt_0482 NC_010681.1 535271 536254 D PFAM: fumarylacetoacetate hydrolase; KEGG: bxe:Bxe_A4235 fumarylacetoacetate hydrolase; fumarylacetoacetate hydrolase 535271..536254 Burkholderia phytofirmans PsJN 6283710 YP_001894132.1 CDS Bphyt_0483 NC_010681.1 536508 537743 D PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A4234 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched chain amino acid ABC transporter substrate-binding protein 536508..537743 Burkholderia phytofirmans PsJN 6283711 YP_001894133.1 CDS Bphyt_0484 NC_010681.1 537793 538680 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 537793..538680 Burkholderia phytofirmans PsJN 6283712 YP_001894134.1 CDS Bphyt_0485 NC_010681.1 538778 539599 D KEGG: bxe:Bxe_A4232 hypothetical protein; hypothetical protein 538778..539599 Burkholderia phytofirmans PsJN 6283713 YP_001894135.1 CDS Bphyt_0486 NC_010681.1 540161 541033 D KEGG: bxe:Bxe_A4230 hypothetical protein; hypothetical protein 540161..541033 Burkholderia phytofirmans PsJN 6283714 YP_001894136.1 CDS Bphyt_0487 NC_010681.1 541189 541671 D TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: bxe:Bxe_A4229 cytidyltransferase-related protein; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 541189..541671 Burkholderia phytofirmans PsJN 6282340 YP_001894137.1 CDS Bphyt_0488 NC_010681.1 541743 541982 R KEGG: bxe:Bxe_A4228 hypothetical protein; hypothetical protein complement(541743..541982) Burkholderia phytofirmans PsJN 6282341 YP_001894138.1 CDS Bphyt_0489 NC_010681.1 542036 542848 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(542036..542848) Burkholderia phytofirmans PsJN 6282342 YP_001894139.1 CDS Bphyt_0490 NC_010681.1 542845 543738 R catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase complement(542845..543738) Burkholderia phytofirmans PsJN 6282343 YP_001894140.1 CDS Bphyt_0491 NC_010681.1 543844 544977 D PFAM: protein of unknown function DUF140; KEGG: bxe:Bxe_A4225 ABC transporter inner membrane subunit; hypothetical protein 543844..544977 Burkholderia phytofirmans PsJN 6282344 YP_001894141.1 CDS Bphyt_0492 NC_010681.1 544974 545852 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A4224 ABC transporter ATPase; ABC transporter 544974..545852 Burkholderia phytofirmans PsJN 6282345 YP_001894142.1 CDS Bphyt_0493 NC_010681.1 545869 546831 D PFAM: hypothetical protein; KEGG: bxe:Bxe_A4223 ABC transporter periplasmic ligand binding protein; hypothetical protein 545869..546831 Burkholderia phytofirmans PsJN 6281534 YP_001894143.1 CDS Bphyt_0494 NC_010681.1 546889 547515 D KEGG: bxe:Bxe_A4222 hypothetical protein; hypothetical protein 546889..547515 Burkholderia phytofirmans PsJN 6281535 YP_001894144.1 CDS Bphyt_0495 NC_010681.1 547547 548704 D PFAM: VanZ family protein; KEGG: bxe:Bxe_A4221 hypothetical protein; VanZ family protein 547547..548704 Burkholderia phytofirmans PsJN 6281536 YP_001894145.1 CDS Bphyt_0496 NC_010681.1 548841 549164 D KEGG: bxe:Bxe_A4220 ferredoxin; ferredoxin 548841..549164 Burkholderia phytofirmans PsJN 6281537 YP_001894146.1 CDS Bphyt_0497 NC_010681.1 549173 549817 D KEGG: bxe:Bxe_A4219 hypothetical protein; hypothetical protein 549173..549817 Burkholderia phytofirmans PsJN 6281538 YP_001894147.1 CDS Bphyt_0498 NC_010681.1 550138 551367 D PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: bxe:Bxe_A4218 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 550138..551367 Burkholderia phytofirmans PsJN 6281539 YP_001894148.1 CDS Bphyt_0499 NC_010681.1 551381 552346 D PFAM: aminotransferase class IV; KEGG: bxe:Bxe_A4217 aminotransferase, class IV; class IV aminotransferase 551381..552346 Burkholderia phytofirmans PsJN 6281782 YP_001894149.1 CDS Bphyt_0500 NC_010681.1 552318 552587 D PFAM: protein of unknown function DUF493; KEGG: bcm:Bcenmc03_2901 protein of unknown function DUF493; hypothetical protein 552318..552587 Burkholderia phytofirmans PsJN 6281783 YP_001894150.1 CDS Bphyt_0501 NC_010681.1 552604 553572 R glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(552604..553572) Burkholderia phytofirmans PsJN 6281784 YP_001894151.1 CDS Bphyt_0502 NC_010681.1 553671 553997 D KEGG: bxe:Bxe_A4214 hypothetical protein; hypothetical protein 553671..553997 Burkholderia phytofirmans PsJN 6281785 YP_001894152.1 CDS lipB NC_010681.1 554196 554921 D lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferse; lipoate-protein ligase B; transfers lipoate to apolipoproteins; involved in lipoate metabolism; lipoyltransferase 554196..554921 Burkholderia phytofirmans PsJN 6281786 YP_001894153.1 CDS Bphyt_0504 NC_010681.1 554935 555942 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 554935..555942 Burkholderia phytofirmans PsJN 6281787 YP_001894154.1 CDS Bphyt_0505 NC_010681.1 556063 556197 R hypothetical protein complement(556063..556197) Burkholderia phytofirmans PsJN 6284210 YP_001894155.1 CDS Bphyt_0506 NC_010681.1 556254 556700 R KEGG: bxe:Bxe_A4210 hypothetical protein; hypothetical protein complement(556254..556700) Burkholderia phytofirmans PsJN 6284211 YP_001894156.1 CDS Bphyt_0507 NC_010681.1 556976 557998 D KEGG: bxe:Bxe_A4209 ABC taurine transporter periplasmic ligand binding protein; TIGRFAM: taurine ABC transporter periplasmic binding protein; PFAM: substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; taurine ABC transporter periplasmic binding protein 556976..557998 Burkholderia phytofirmans PsJN 6284212 YP_001894157.1 CDS Bphyt_0508 NC_010681.1 558040 558837 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A4208 ABC taurine transporter ATPase; ABC transporter 558040..558837 Burkholderia phytofirmans PsJN 6284213 YP_001894158.1 CDS Bphyt_0509 NC_010681.1 558834 559703 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A4207 ABC taurine transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 558834..559703 Burkholderia phytofirmans PsJN 6284214 YP_001894159.1 CDS Bphyt_0510 NC_010681.1 559731 560414 R TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: bxe:Bxe_A4206 HAD-superfamily hydrolase, subfamily IB(PSPase-like); HAD family hydrolase complement(559731..560414) Burkholderia phytofirmans PsJN 6284215 YP_001894160.1 CDS Bphyt_0511 NC_010681.1 560615 562300 D TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: bxe:Bxe_A4205 Na+/phosphate symporter; sodium-dependent inorganic phosphate (Pi) transporter 560615..562300 Burkholderia phytofirmans PsJN 6284461 YP_001894161.1 CDS Bphyt_0512 NC_010681.1 562332 563102 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bxe:Bxe_A4204 DeoR family transcriptional regulator; DeoR family transcriptional regulator complement(562332..563102) Burkholderia phytofirmans PsJN 6284462 YP_001894162.1 CDS ugpQ NC_010681.1 563676 564464 D hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase 563676..564464 Burkholderia phytofirmans PsJN 6284463 YP_001894163.1 CDS Bphyt_0514 NC_010681.1 564570 565685 D PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A4201 ABC polyamine/opine/phosphonate transporter periplasmic ligand binding protein; family 1 extracellular solute-binding protein 564570..565685 Burkholderia phytofirmans PsJN 6284464 YP_001894164.1 CDS Bphyt_0515 NC_010681.1 565830 566768 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A4200 ABC spermidine/putrescine transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 565830..566768 Burkholderia phytofirmans PsJN 6284465 YP_001894165.1 CDS Bphyt_0516 NC_010681.1 566765 567556 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A4199 ABC spermidine/putrescine transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 566765..567556 Burkholderia phytofirmans PsJN 6284466 YP_001894166.1 CDS Bphyt_0517 NC_010681.1 567642 568712 D KEGG: bxe:Bxe_A4198 ABC spermidine/putrescine transporter ATPase; TIGRFAM: spermidine/putrescine ABC transporter ATPase; PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: ATPase AAA; spermidine/putrescine ABC transporter ATPase 567642..568712 Burkholderia phytofirmans PsJN 6281258 YP_001894167.1 CDS Bphyt_0518 NC_010681.1 569117 570397 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 569117..570397 Burkholderia phytofirmans PsJN 6281259 YP_001894168.1 CDS Bphyt_0519 NC_010681.1 570453 572453 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A4196 histidine kinase; histidine kinase 570453..572453 Burkholderia phytofirmans PsJN 6281260 YP_001894169.1 CDS Bphyt_0520 NC_010681.1 572471 573823 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: bxe:Bxe_A4195 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, fis family; Fis family transcriptional regulator 572471..573823 Burkholderia phytofirmans PsJN 6281261 YP_001894170.1 CDS Bphyt_0521 NC_010681.1 573902 574432 R PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; electron transporter SCO1/SenC; Redoxin domain protein; KEGG: bxe:Bxe_A4194 thiol-disulfide isomerase and thioredoxins; redoxin complement(573902..574432) Burkholderia phytofirmans PsJN 6281262 YP_001894171.1 CDS Bphyt_0522 NC_010681.1 574870 575319 D KEGG: bxe:Bxe_A4193 hypothetical protein; hypothetical protein 574870..575319 Burkholderia phytofirmans PsJN 6281263 YP_001894172.1 CDS Bphyt_0523 NC_010681.1 575663 577261 R KEGG: bxe:Bxe_A4192 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; Mg chelatase subunit ChlI complement(575663..577261) Burkholderia phytofirmans PsJN 6284278 YP_001894173.1 CDS Bphyt_0524 NC_010681.1 577383 577637 R PFAM: protein of unknown function DUF526; KEGG: bxe:Bxe_A4191 hypothetical protein; hypothetical protein complement(577383..577637) Burkholderia phytofirmans PsJN 6284279 YP_001894174.1 CDS Bphyt_0525 NC_010681.1 578053 578391 D PFAM: nitrogen regulatory protein P-II; KEGG: bxe:Bxe_A4190 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 578053..578391 Burkholderia phytofirmans PsJN 6284280 YP_001894175.1 CDS Bphyt_0526 NC_010681.1 578436 579944 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bxe:Bxe_A4189 ammonium transporter; ammonium transporter 578436..579944 Burkholderia phytofirmans PsJN 6284281 YP_001894176.1 CDS Bphyt_0527 NC_010681.1 580181 581470 D TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: bxe:Bxe_A4188 glutamate-cysteine ligase; glutamate/cysteine ligase 580181..581470 Burkholderia phytofirmans PsJN 6284282 YP_001894177.1 CDS Bphyt_0528 NC_010681.1 581572 582528 D The second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 581572..582528 Burkholderia phytofirmans PsJN 6284283 YP_001894178.1 CDS Bphyt_0529 NC_010681.1 582866 583393 D PFAM: PTS system fructose subfamily IIA component; KEGG: bxe:Bxe_A4186 sugar transport PTS system IIa component; PTS system fructose subfamily transporter subunit IIA 582866..583393 Burkholderia phytofirmans PsJN 6281488 YP_001894179.1 CDS Bphyt_0530 NC_010681.1 583490 583759 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: bxe:Bxe_A4185 HPrNtr; PTS system phosphocarrier protein HPr 583490..583759 Burkholderia phytofirmans PsJN 6281489 YP_001894180.1 CDS Bphyt_0531 NC_010681.1 584065 585813 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: bxe:Bxe_A4184 PTS system EI component, phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 584065..585813 Burkholderia phytofirmans PsJN 6281490 YP_001894181.1 CDS Bphyt_0532 NC_010681.1 585901 586659 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bxe:Bxe_A4183 molybdopterin biosynthesis protein; UBA/THIF-type NAD/FAD binding protein complement(585901..586659) Burkholderia phytofirmans PsJN 6281491 YP_001894182.1 CDS Bphyt_0533 NC_010681.1 586824 588392 R KEGG: bxe:Bxe_A4182 peptidase S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease complement(586824..588392) Burkholderia phytofirmans PsJN 6281492 YP_001894183.1 CDS Bphyt_0534 NC_010681.1 588697 589443 R KEGG: bxe:Bxe_A4181 phosphoglycerate mutase 1; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: phosphoglycerate mutase; phosphoglycerate mutase complement(588697..589443) Burkholderia phytofirmans PsJN 6281493 YP_001894184.1 CDS Bphyt_0535 NC_010681.1 589582 590007 D PFAM: rhodanese; KEGG: bxe:Bxe_A4180 rhodanese-related sulfurtransferase; rhodanese 589582..590007 Burkholderia phytofirmans PsJN 6281283 YP_001894185.1 CDS Bphyt_0536 NC_010681.1 590004 590267 D TIGRFAM: glutaredoxin; PFAM: glutaredoxin; KEGG: bxe:Bxe_A4179 glutaredoxin; glutaredoxin 590004..590267 Burkholderia phytofirmans PsJN 6281284 YP_001894186.1 CDS Bphyt_0537 NC_010681.1 590413 590883 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 590413..590883 Burkholderia phytofirmans PsJN 6281285 YP_001894187.1 CDS gpsA NC_010681.1 590906 591904 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 590906..591904 Burkholderia phytofirmans PsJN 6281286 YP_001894188.1 CDS Bphyt_0539 NC_010681.1 591999 592547 D PFAM: Appr-1-p processing domain protein; KEGG: bxe:Bxe_A4176 appr-1-p processing enzyme; Appr-1-p processing protein 591999..592547 Burkholderia phytofirmans PsJN 6281287 YP_001894189.1 CDS Bphyt_0540 NC_010681.1 592520 592990 R TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bxe:Bxe_A4175 RNA methyltransferase TrmH, group 2; RNA methyltransferase complement(592520..592990) Burkholderia phytofirmans PsJN 6281288 YP_001894190.1 CDS Bphyt_0541 NC_010681.1 593009 593794 R PFAM: phosphoribosyltransferase; KEGG: bxe:Bxe_A4174 competence protein F-related protein; phosphoribosyltransferase complement(593009..593794) Burkholderia phytofirmans PsJN 6281577 YP_001894191.1 CDS Bphyt_0542 NC_010681.1 593879 594844 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bxe:Bxe_A4173 hypothetical protein; type 11 methyltransferase 593879..594844 Burkholderia phytofirmans PsJN 6281578 YP_001894192.1 CDS Bphyt_0543 NC_010681.1 595158 595631 D KEGG: bxe:Bxe_A4172 hypothetical protein; hypothetical protein 595158..595631 Burkholderia phytofirmans PsJN 6281579 YP_001894193.1 CDS Bphyt_0544 NC_010681.1 595698 597332 D TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C class I; OmpA/MotB domain protein; cytochrome C oxidase subunit II transmembrane region; KEGG: bxe:Bxe_A4171 cytochrome C oxidase; cytochrome C oxidase subunit II 595698..597332 Burkholderia phytofirmans PsJN 6281580 YP_001894194.1 CDS Bphyt_0545 NC_010681.1 597377 598990 D KEGG: bxe:Bxe_A4170 cytochrome-c oxidase; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome C oxidase subunit I 597377..598990 Burkholderia phytofirmans PsJN 6281581 YP_001894195.1 CDS Bphyt_0546 NC_010681.1 599105 599239 D KEGG: bvi:Bcep1808_2945 hypothetical protein; hypothetical protein 599105..599239 Burkholderia phytofirmans PsJN 6281582 YP_001894196.1 CDS Bphyt_0547 NC_010681.1 599282 599920 D involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 599282..599920 Burkholderia phytofirmans PsJN 6281011 YP_001894197.1 CDS Bphyt_0548 NC_010681.1 599957 600166 D KEGG: bxe:Bxe_A4168 hypothetical protein; hypothetical protein 599957..600166 Burkholderia phytofirmans PsJN 6281012 YP_001894198.1 CDS Bphyt_0549 NC_010681.1 600299 601156 D PFAM: cytochrome C oxidase subunit III; KEGG: bxe:Bxe_A4167 cytochrome C oxidase subunit III; cytochrome C oxidase subunit III 600299..601156 Burkholderia phytofirmans PsJN 6281013 YP_001894199.1 CDS Bphyt_0550 NC_010681.1 601338 601547 R KEGG: bxe:Bxe_A4166 hypothetical protein; hypothetical protein complement(601338..601547) Burkholderia phytofirmans PsJN 6281014 YP_001894200.1 CDS Bphyt_0551 NC_010681.1 601659 602375 D KEGG: bxe:Bxe_A4165 hypothetical protein; hypothetical protein 601659..602375 Burkholderia phytofirmans PsJN 6281015 YP_001894201.1 CDS Bphyt_0552 NC_010681.1 602443 603105 D KEGG: bxe:Bxe_A4164 hypothetical protein; hypothetical protein 602443..603105 Burkholderia phytofirmans PsJN 6281016 YP_001894202.1 CDS Bphyt_0553 NC_010681.1 603128 604237 D PFAM: cytochrome oxidase assembly; KEGG: bxe:Bxe_A4163 cytochrome oxidase assembly protein; cytochrome oxidase assembly 603128..604237 Burkholderia phytofirmans PsJN 6284052 YP_001894203.1 CDS Bphyt_0554 NC_010681.1 604244 605149 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 604244..605149 Burkholderia phytofirmans PsJN 6284053 YP_001894204.1 CDS Bphyt_0555 NC_010681.1 605154 605771 D PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; electron transporter SCO1/SenC; KEGG: bxe:Bxe_A4161 electron transporter SCO1/SenC; electron transporter SCO1/SenC 605154..605771 Burkholderia phytofirmans PsJN 6284054 YP_001894205.1 CDS Bphyt_0556 NC_010681.1 605839 606129 R PFAM: YCII-related; KEGG: bxe:Bxe_A4160 hypothetical protein; YciI-like protein complement(605839..606129) Burkholderia phytofirmans PsJN 6284055 YP_001894206.1 CDS Bphyt_0557 NC_010681.1 606386 608269 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bxe:Bxe_A4159 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 606386..608269 Burkholderia phytofirmans PsJN 6284056 YP_001894207.1 CDS Bphyt_0558 NC_010681.1 608519 609331 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bxe:Bxe_A4158 ABC transporter periplasmic ligand binding protein, YaeC family; lipoprotein 608519..609331 Burkholderia phytofirmans PsJN 6284057 YP_001894208.1 CDS Bphyt_0559 NC_010681.1 609345 610271 R PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: bxe:Bxe_A4157 MarR family transcriptional regulator with acetyltransferase activity; MarR family transcriptional regulator complement(609345..610271) Burkholderia phytofirmans PsJN 6284429 YP_001894209.1 CDS Bphyt_0560 NC_010681.1 610643 611377 D PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_A4156 transcriptional regulator, GntR family; GntR family transcriptional regulator 610643..611377 Burkholderia phytofirmans PsJN 6284430 YP_001894210.1 CDS Bphyt_0561 NC_010681.1 611479 612582 D KEGG: bxe:Bxe_A4155 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 611479..612582 Burkholderia phytofirmans PsJN 6284431 YP_001894211.1 CDS Bphyt_0562 NC_010681.1 612566 613582 D PFAM: sugar isomerase (SIS); KEGG: bxe:Bxe_A4154 glutamine-fructose-6-phosphate transaminase(isomerizing); glutamine--fructose-6-phosphate transaminase 612566..613582 Burkholderia phytofirmans PsJN 6284432 YP_001894212.1 CDS Bphyt_0563 NC_010681.1 613621 616185 D TIGRFAM: PTS system, glucose subfamily, IIsubunit alpha; phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; sugar-specific permease EIIA 1 domain; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: bxe:Bxe_A4153 PTS system, sugar-specific EIIA/HPr/EI components; phosphoenolpyruvate-protein phosphotransferase 613621..616185 Burkholderia phytofirmans PsJN 6284433 YP_001894213.1 CDS Bphyt_0564 NC_010681.1 616295 618070 D TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: bxe:Bxe_A4152 PTS system, N-acetylglucosamine-specific IIBC component; PTS system N-acetylglucosamine-specific transporter subunit IIBC 616295..618070 Burkholderia phytofirmans PsJN 6284434 YP_001894214.1 CDS Bphyt_0565 NC_010681.1 618326 619651 D KEGG: bxe:Bxe_A4151 hypothetical protein; hypothetical protein 618326..619651 Burkholderia phytofirmans PsJN 6284680 YP_001894215.1 CDS Bphyt_0566 NC_010681.1 619744 619857 R TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bxe:Bxe_A4150 hypothetical protein; cyd operon protein YbgT complement(619744..619857) Burkholderia phytofirmans PsJN 6284681 YP_001894216.1 CDS Bphyt_0567 NC_010681.1 619886 621022 R KEGG: bxe:Bxe_A4149 cytochrome bd ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II complement(619886..621022) Burkholderia phytofirmans PsJN 6284682 YP_001894217.1 CDS Bphyt_0568 NC_010681.1 621058 622650 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bxe:Bxe_A1908 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I complement(621058..622650) Burkholderia phytofirmans PsJN 6284683 YP_001894218.1 CDS Bphyt_0569 NC_010681.1 622640 622900 R KEGG: bxe:Bxe_A4147 hypothetical protein; hypothetical protein complement(622640..622900) Burkholderia phytofirmans PsJN 6284684 YP_001894219.1 CDS Bphyt_0570 NC_010681.1 623239 624174 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(623239..624174) Burkholderia phytofirmans PsJN 6284685 YP_001894220.1 CDS Bphyt_0571 NC_010681.1 624538 625101 D KEGG: bxe:Bxe_A4145 hypothetical protein; hypothetical protein 624538..625101 Burkholderia phytofirmans PsJN 6281146 YP_001894221.1 CDS Bphyt_0572 NC_010681.1 625144 625527 D KEGG: bxe:Bxe_A4144 hypothetical protein; hypothetical protein 625144..625527 Burkholderia phytofirmans PsJN 6281147 YP_001894222.1 CDS Bphyt_0573 NC_010681.1 625654 626763 R PFAM: pyruvate carboxyltransferase; KEGG: bte:BTH_I0459 2-isopropylmalate synthase; 2-isopropylmalate synthase complement(625654..626763) Burkholderia phytofirmans PsJN 6281148 YP_001894223.1 CDS Bphyt_0574 NC_010681.1 626744 626938 R hypothetical protein complement(626744..626938) Burkholderia phytofirmans PsJN 6281149 YP_001894224.1 CDS Bphyt_0575 NC_010681.1 627272 628243 R PFAM: glycosyl transferase, family 3-like; KEGG: bxe:Bxe_A4143 hypothetical protein; glycosyl transferase complement(627272..628243) Burkholderia phytofirmans PsJN 6281150 YP_001894225.1 CDS Bphyt_0576 NC_010681.1 628472 629170 D PFAM: fumarylacetoacetate hydrolase; KEGG: bxe:Bxe_A4142 fumarylacetoacetate hydrolase; fumarylacetoacetate hydrolase 628472..629170 Burkholderia phytofirmans PsJN 6281151 YP_001894226.1 CDS Bphyt_0577 NC_010681.1 629196 629840 D TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A4141 maleylacetoacetate isomerase (HmgC); maleylacetoacetate isomerase 629196..629840 Burkholderia phytofirmans PsJN 6283846 YP_001894227.1 CDS Bphyt_0578 NC_010681.1 629939 631099 R KEGG: bxe:Bxe_A4140 signal recognition particle-docking protein FtsY(cell division protein); TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA; signal recognition particle-docking protein FtsY complement(629939..631099) Burkholderia phytofirmans PsJN 6283847 YP_001894228.1 CDS Bphyt_0579 NC_010681.1 631340 631954 D TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase KEGG: bxe:Bxe_A4139 conserved hypothetical protein 95; methyltransferase 631340..631954 Burkholderia phytofirmans PsJN 6283848 YP_001894229.1 CDS coaD NC_010681.1 632067 632582 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 632067..632582 Burkholderia phytofirmans PsJN 6283849 YP_001894230.1 CDS Bphyt_0581 NC_010681.1 632646 632903 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bxe:Bxe_A4137 ferredoxin; 4Fe-4S ferredoxin 632646..632903 Burkholderia phytofirmans PsJN 6283850 YP_001894231.1 CDS Bphyt_0582 NC_010681.1 632981 634060 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(632981..634060) Burkholderia phytofirmans PsJN 6283851 YP_001894232.1 CDS Bphyt_0583 NC_010681.1 634129 634731 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(634129..634731) Burkholderia phytofirmans PsJN 6283052 YP_001894233.1 CDS Bphyt_0584 NC_010681.1 634882 635502 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(634882..635502) Burkholderia phytofirmans PsJN 6283053 YP_001894234.1 CDS Bphyt_0585 NC_010681.1 635666 636622 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(635666..636622) Burkholderia phytofirmans PsJN 6283054 YP_001894235.1 CDS ipk NC_010681.1 636794 637675 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(636794..637675) Burkholderia phytofirmans PsJN 6283056 YP_001894236.1 CDS lolB NC_010681.1 637754 638386 R Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB complement(637754..638386) Burkholderia phytofirmans PsJN 6283609 YP_001894237.1 CDS Bphyt_0588 NC_010681.1 638386 640227 R PFAM: hypothetical protein; Tetratricopeptide TPR_4; SMART: hypothetical protein; KEGG: bxe:Bxe_A4130 hypothetical protein; hypothetical protein complement(638386..640227) Burkholderia phytofirmans PsJN 6283610 YP_001894238.1 CDS Bphyt_0589 NC_010681.1 640315 641145 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 640315..641145 Burkholderia phytofirmans PsJN 6283611 YP_001894239.1 CDS Bphyt_0590 NC_010681.1 641219 642280 D TIGRFAM: A/G-specific adenine glycosylase; PFAM: hypothetical protein; HhH-GPD family protein; KEGG: bxe:Bxe_A4128 A/G-specific adenine glycosylase MutY; A/G-specific adenine glycosylase 641219..642280 Burkholderia phytofirmans PsJN 6283612 YP_001894240.1 CDS Bphyt_0591 NC_010681.1 642310 642945 R PFAM: peptidase S16; KEGG: bxe:Bxe_A4127 hypothetical protein; peptidase S16 complement(642310..642945) Burkholderia phytofirmans PsJN 6283613 YP_001894241.1 CDS Bphyt_0592 NC_010681.1 642985 643878 R PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A4126 hypothetical protein; hypothetical protein complement(642985..643878) Burkholderia phytofirmans PsJN 6283614 YP_001894242.1 CDS Bphyt_0593 NC_010681.1 643976 644944 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(643976..644944) Burkholderia phytofirmans PsJN 6281083 YP_001894243.1 CDS Bphyt_0594 NC_010681.1 645072 645587 R TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bxe:Bxe_A4124 PTS IIA-like nitrogen-regulatory protein PtsN; PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(645072..645587) Burkholderia phytofirmans PsJN 6281084 YP_001894244.1 CDS Bphyt_0595 NC_010681.1 645865 646221 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: bxe:Bxe_A4123 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/30S ribosomal protein S30EA complement(645865..646221) Burkholderia phytofirmans PsJN 6281085 YP_001894245.1 CDS Bphyt_0596 NC_010681.1 646392 647903 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(646392..647903) Burkholderia phytofirmans PsJN 6281086 YP_001894246.1 CDS Bphyt_0597 NC_010681.1 648091 648876 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A4121 ABC transporter ATPase; ABC transporter complement(648091..648876) Burkholderia phytofirmans PsJN 6281087 YP_001894247.1 CDS Bphyt_0598 NC_010681.1 648873 649544 R TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: bxe:Bxe_A4120 hypothetical protein; lipopolysaccharide transport periplasmic protein LptA complement(648873..649544) Burkholderia phytofirmans PsJN 6281088 YP_001894248.1 CDS Bphyt_0599 NC_010681.1 649565 650173 R PFAM: protein of unknown function DUF1239; KEGG: bxe:Bxe_A4119 hypothetical protein; hypothetical protein complement(649565..650173) Burkholderia phytofirmans PsJN 6280972 YP_001894249.1 CDS Bphyt_0600 NC_010681.1 650170 650730 R TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: bxe:Bxe_A4118 phosphatase YrbI; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(650170..650730) Burkholderia phytofirmans PsJN 6280973 YP_001894250.1 CDS Bphyt_0601 NC_010681.1 650730 651713 R KEGG: bxe:Bxe_A4117 KpsF/GutQ; TIGRFAM: KpsF/GutQ family protein; PFAM: hypothetical protein; sugar isomerase (SIS); KpsF/GutQ family protein complement(650730..651713) Burkholderia phytofirmans PsJN 6280974 YP_001894251.1 CDS Bphyt_0602 NC_010681.1 651875 653878 D PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: bxe:Bxe_A4116 glutathione-regulated potassium efflux system protein; sodium/hydrogen exchanger 651875..653878 Burkholderia phytofirmans PsJN 6280975 YP_001894252.1 CDS Bphyt_0603 NC_010681.1 653970 654536 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 653970..654536 Burkholderia phytofirmans PsJN 6280976 YP_001894253.1 CDS Bphyt_0604 NC_010681.1 654595 655209 D PFAM: lysine exporter (LYSE/YGGA); KEGG: bxe:Bxe_A4114 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA 654595..655209 Burkholderia phytofirmans PsJN 6280977 YP_001894254.1 CDS Bphyt_0605 NC_010681.1 655253 656116 D PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A4113 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase 655253..656116 Burkholderia phytofirmans PsJN 6282334 YP_001894255.1 CDS purU NC_010681.1 656217 657086 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 656217..657086 Burkholderia phytofirmans PsJN 6282335 YP_001894256.1 CDS Bphyt_0607 NC_010681.1 657164 658390 R PFAM: PepSY-associated TM helix domain protein; KEGG: bxe:Bxe_A4111 hypothetical protein; PepSY-associated TM helix domain-containing protein complement(657164..658390) Burkholderia phytofirmans PsJN 6282336 YP_001894257.1 CDS Bphyt_0608 NC_010681.1 658575 659660 R KEGG: bxe:Bxe_A4109 hypothetical protein; hypothetical protein complement(658575..659660) Burkholderia phytofirmans PsJN 6282337 YP_001894258.1 CDS Bphyt_0609 NC_010681.1 659698 662571 R TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter related; KEGG: bxe:Bxe_A4108 excinuclease ABC subunit A; excinuclease ABC subunit A complement(659698..662571) Burkholderia phytofirmans PsJN 6282338 YP_001894259.1 CDS Bphyt_0610 NC_010681.1 662928 664115 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4107 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein 662928..664115 Burkholderia phytofirmans PsJN 6282339 YP_001894260.1 CDS Bphyt_0611 NC_010681.1 664251 664790 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 664251..664790 Burkholderia phytofirmans PsJN 6281725 YP_001894261.1 CDS Bphyt_0612 NC_010681.1 665087 665587 D PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_A4088 hypothetical protein; MaoC domain-containing protein dehydratase 665087..665587 Burkholderia phytofirmans PsJN 6281726 YP_001894262.1 CDS Bphyt_0613 NC_010681.1 665754 667175 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4087 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein 665754..667175 Burkholderia phytofirmans PsJN 6281727 YP_001894263.1 CDS Bphyt_0614 NC_010681.1 667181 668593 D PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_A4086 hypothetical protein; MmgE/PrpD family protein 667181..668593 Burkholderia phytofirmans PsJN 6281728 YP_001894264.1 CDS Bphyt_0615 NC_010681.1 668604 669767 D PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A4085 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 668604..669767 Burkholderia phytofirmans PsJN 6281729 YP_001894265.1 CDS Bphyt_0616 NC_010681.1 669764 670954 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A4084 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 669764..670954 Burkholderia phytofirmans PsJN 6281730 YP_001894266.1 CDS Bphyt_0617 NC_010681.1 671000 671752 D PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_A4083 transcriptional regulator, GntR family; GntR family transcriptional regulator 671000..671752 Burkholderia phytofirmans PsJN 6283968 YP_001894267.1 CDS Bphyt_0618 NC_010681.1 671787 672599 D PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_A4082 citrate lyase; citrate (pro-3S)-lyase 671787..672599 Burkholderia phytofirmans PsJN 6283969 YP_001894268.1 CDS Bphyt_0619 NC_010681.1 672614 673414 R KEGG: bxe:Bxe_A4081 hypothetical protein; hypothetical protein complement(672614..673414) Burkholderia phytofirmans PsJN 6283970 YP_001894269.1 CDS Bphyt_0620 NC_010681.1 673714 675363 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A4080 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 673714..675363 Burkholderia phytofirmans PsJN 6283971 YP_001894270.1 CDS Bphyt_0621 NC_010681.1 675435 676244 R PFAM: cytochrome C class I; KEGG: bxe:Bxe_A4079 cytochrome C, class I; cytochrome C class I complement(675435..676244) Burkholderia phytofirmans PsJN 6283972 YP_001894271.1 CDS Bphyt_0622 NC_010681.1 676241 677866 R PFAM: cytochrome C oxidase subunit I; KEGG: bxe:Bxe_A4078 cytochrome C oxidase subunit I; cytochrome C oxidase subunit I complement(676241..677866) Burkholderia phytofirmans PsJN 6283973 YP_001894272.1 CDS Bphyt_0623 NC_010681.1 677853 678425 R PFAM: cytochrome C oxidase subunit II; KEGG: bxe:Bxe_A4077 cytochrome C oxidase subunit II; cytochrome C oxidase subunit II complement(677853..678425) Burkholderia phytofirmans PsJN 6281169 YP_001894273.1 CDS Bphyt_0624 NC_010681.1 678428 678601 R KEGG: bxe:Bxe_A4076 hypothetical protein; hypothetical protein complement(678428..678601) Burkholderia phytofirmans PsJN 6281170 YP_001894274.1 CDS Bphyt_0625 NC_010681.1 678626 680011 R PFAM: cytochrome C class I; KEGG: bxe:Bxe_A4075 cytochrome C precursor; gluconate 2-dehydrogenase complement(678626..680011) Burkholderia phytofirmans PsJN 6281171 YP_001894275.1 CDS Bphyt_0626 NC_010681.1 680008 680721 R KEGG: bxe:Bxe_A4074 periplasmic cytochrome C protein; periplasmic cytochrome C protein complement(680008..680721) Burkholderia phytofirmans PsJN 6281172 YP_001894276.1 CDS Bphyt_0627 NC_010681.1 681210 682097 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A4073 LysR family transcriptional regulator; LysR family transcriptional regulator complement(681210..682097) Burkholderia phytofirmans PsJN 6281173 YP_001894277.1 CDS Bphyt_0628 NC_010681.1 682193 683512 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4072 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein 682193..683512 Burkholderia phytofirmans PsJN 6281174 YP_001894278.1 CDS Bphyt_0629 NC_010681.1 683843 684535 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_A4071 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 683843..684535 Burkholderia phytofirmans PsJN 6282591 YP_001894279.1 CDS Bphyt_0630 NC_010681.1 684688 685392 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_A4070 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 684688..685392 Burkholderia phytofirmans PsJN 6282592 YP_001894280.1 CDS Bphyt_0631 NC_010681.1 685497 686141 D PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_A4069 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 685497..686141 Burkholderia phytofirmans PsJN 6282593 YP_001894281.1 CDS Bphyt_0632 NC_010681.1 686402 687148 D PFAM: major intrinsic protein; KEGG: bxe:Bxe_A4068 aquaporin Z; major intrinsic protein 686402..687148 Burkholderia phytofirmans PsJN 6282594 YP_001894282.1 CDS Bphyt_0633 NC_010681.1 687203 691645 D KEGG: bxe:Bxe_A4067 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: extracellular solute-binding protein family 3; PAS/PAC sensor hybrid histidine kinase 687203..691645 Burkholderia phytofirmans PsJN 6282595 YP_001894283.1 CDS Bphyt_0634 NC_010681.1 692142 692576 D PFAM: CHRD domain containing protein; KEGG: bxe:Bxe_A4065 hypothetical protein; CHRD domain-containing protein 692142..692576 Burkholderia phytofirmans PsJN 6282596 YP_001894284.1 CDS Bphyt_0635 NC_010681.1 692694 693650 D PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: bxe:Bxe_A4064 lipase/esterase; alpha/beta hydrolase 692694..693650 Burkholderia phytofirmans PsJN 6283981 YP_001894285.1 CDS Bphyt_0636 NC_010681.1 693620 694462 R KEGG: bxe:Bxe_A4063 hypothetical protein; hypothetical protein complement(693620..694462) Burkholderia phytofirmans PsJN 6283982 YP_001894286.1 CDS Bphyt_0637 NC_010681.1 694600 696195 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4062 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 694600..696195 Burkholderia phytofirmans PsJN 6283983 YP_001894287.1 CDS Bphyt_0638 NC_010681.1 696227 696736 D PFAM: regulatory protein MarR; KEGG: bxe:Bxe_A4061 MarR family transcriptional regulator; MarR family transcriptional regulator 696227..696736 Burkholderia phytofirmans PsJN 6283984 YP_001894288.1 CDS Bphyt_0639 NC_010681.1 696862 698139 R KEGG: bxe:Bxe_A4060 D-serine deaminase (d-serine dehydratase) protein; D-serine deaminase (d-serine dehydratase) protein complement(696862..698139) Burkholderia phytofirmans PsJN 6283985 YP_001894289.1 CDS Bphyt_0640 NC_010681.1 698299 699189 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_A4059 RpiR family transcriptional regulator; RpiR family transcriptional regulator 698299..699189 Burkholderia phytofirmans PsJN 6283986 YP_001894290.1 CDS Bphyt_0641 NC_010681.1 699193 700674 D PFAM: amidohydrolase; D-aminoacylase domain protein; amidohydrolase; KEGG: bxe:Bxe_A4058 N-acyl-D-amino-acid deacylase; N-acyl-D-amino-acid deacylase 699193..700674 Burkholderia phytofirmans PsJN 6282115 YP_001894291.1 CDS Bphyt_0642 NC_010681.1 700749 701135 D PFAM: endoribonuclease L-PSP; KEGG: bxe:Bxe_A4057 translation inhibitor, YjgF family; endoribonuclease L-PSP 700749..701135 Burkholderia phytofirmans PsJN 6282116 YP_001894292.1 CDS queF NC_010681.1 701210 702034 R catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(701210..702034) Burkholderia phytofirmans PsJN 6282117 YP_001894293.1 CDS Bphyt_0644 NC_010681.1 702031 702933 R PFAM: 5-nucleotidase; KEGG: bxe:Bxe_A4055 hypothetical protein; 5'-nucleotidase complement(702031..702933) Burkholderia phytofirmans PsJN 6282118 YP_001894294.1 CDS Bphyt_0645 NC_010681.1 702957 704480 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(702957..704480) Burkholderia phytofirmans PsJN 6282119 YP_001894295.1 CDS Bphyt_0646 NC_010681.1 704985 709079 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase; KEGG: bxe:Bxe_A4053 oxidoreductase; FAD linked oxidase 704985..709079 Burkholderia phytofirmans PsJN 6282120 YP_001894296.1 CDS Bphyt_0647 NC_010681.1 709114 709542 D PFAM: histidine triad (HIT) protein; KEGG: bxe:Bxe_A4052 hypothetical protein; histidine triad (HIT) protein 709114..709542 Burkholderia phytofirmans PsJN 6283521 YP_001894297.1 CDS Bphyt_0648 NC_010681.1 709627 710040 D PFAM: protein of unknown function DUF971; KEGG: bxe:Bxe_A4051 hypothetical protein; hypothetical protein 709627..710040 Burkholderia phytofirmans PsJN 6283522 YP_001894298.1 CDS ubiE NC_010681.1 710108 710839 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 710108..710839 Burkholderia phytofirmans PsJN 6283523 YP_001894299.1 CDS Bphyt_0650 NC_010681.1 710878 711870 D PFAM: import inner membrane translocase subunit Tim44; KEGG: bxe:Bxe_A4049 hypothetical protein; import inner membrane translocase subunit Tim44 710878..711870 Burkholderia phytofirmans PsJN 6283524 YP_001894300.1 CDS Bphyt_0651 NC_010681.1 712028 712672 D PFAM: sterol-binding domain protein; KEGG: bxe:Bxe_A4048 hypothetical protein; sterol-binding domain-containing protein 712028..712672 Burkholderia phytofirmans PsJN 6283525 YP_001894301.1 CDS ubiB NC_010681.1 712688 714265 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 712688..714265 Burkholderia phytofirmans PsJN 6283526 YP_001894302.1 CDS Bphyt_0653 NC_010681.1 714289 714912 D PFAM: thiopurine S-methyltransferase; KEGG: bxe:Bxe_A4046 hypothetical protein; thiopurine S-methyltransferase 714289..714912 Burkholderia phytofirmans PsJN 6282224 YP_001894303.1 CDS Bphyt_0654 NC_010681.1 715095 715472 D TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: bxe:Bxe_A4045 hypothetical protein; FmdB family regulatory protein 715095..715472 Burkholderia phytofirmans PsJN 6282225 YP_001894304.1 CDS Bphyt_0655 NC_010681.1 715548 716201 D PFAM: protein of unknown function DUF502; KEGG: bxe:Bxe_A4044 hypothetical protein; hypothetical protein 715548..716201 Burkholderia phytofirmans PsJN 6282226 YP_001894305.1 CDS aspS NC_010681.1 716265 718064 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 716265..718064 Burkholderia phytofirmans PsJN 6282227 YP_001894306.1 CDS ntpA NC_010681.1 718246 718761 D converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 718246..718761 Burkholderia phytofirmans PsJN 6282228 YP_001894307.1 CDS Bphyt_0658 NC_010681.1 718758 720017 D PFAM: phospholipase D/transphosphatidylase; KEGG: bxe:Bxe_A4041 phospholipase; phospholipase D/transphosphatidylase 718758..720017 Burkholderia phytofirmans PsJN 6282229 YP_001894308.1 CDS Bphyt_0660 NC_010681.1 720855 721454 D PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A4039 TetR family transcriptional regulator; TetR family transcriptional regulator 720855..721454 Burkholderia phytofirmans PsJN 6283504 YP_001894309.1 CDS Bphyt_0661 NC_010681.1 721553 723340 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A4038 acyl-CoA dehydrogenase oxidoreductase; acyl-CoA dehydrogenase domain-containing protein 721553..723340 Burkholderia phytofirmans PsJN 6283505 YP_001894310.1 CDS Bphyt_0662 NC_010681.1 723469 725904 D PFAM: enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_A4037 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase 723469..725904 Burkholderia phytofirmans PsJN 6283506 YP_001894311.1 CDS Bphyt_0663 NC_010681.1 726094 727293 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 726094..727293 Burkholderia phytofirmans PsJN 6283507 YP_001894312.1 CDS Bphyt_0664 NC_010681.1 727412 728182 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 727412..728182 Burkholderia phytofirmans PsJN 6283508 YP_001894313.1 CDS Bphyt_0665 NC_010681.1 728323 729162 R TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: bxe:Bxe_A4034 formate dehydrogenase, subunit FdhD; formate dehydrogenase family accessory protein FdhD complement(728323..729162) Burkholderia phytofirmans PsJN 6284478 YP_001894314.1 CDS Bphyt_0666 NC_010681.1 729311 729787 D PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A4033 hypothetical protein; hypothetical protein 729311..729787 Burkholderia phytofirmans PsJN 6284479 YP_001894315.1 CDS Bphyt_0667 NC_010681.1 730026 733136 D KEGG: bxe:Bxe_A4032 diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 730026..733136 Burkholderia phytofirmans PsJN 6284480 YP_001894316.1 CDS Bphyt_0668 NC_010681.1 733156 733770 R PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A4031 glutathione S-transferase; glutathione S-transferase complement(733156..733770) Burkholderia phytofirmans PsJN 6284481 YP_001894317.1 CDS Bphyt_0669 NC_010681.1 733931 734860 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A4030 LysR family transcriptional regulator; LysR family transcriptional regulator 733931..734860 Burkholderia phytofirmans PsJN 6284482 YP_001894318.1 CDS Bphyt_0670 NC_010681.1 735056 735394 D KEGG: bxe:Bxe_A4029 hypothetical protein; hypothetical protein 735056..735394 Burkholderia phytofirmans PsJN 6284483 YP_001894319.1 CDS Bphyt_0671 NC_010681.1 735463 735858 R PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A4028 thioesterase domain protein; thioesterase superfamily protein complement(735463..735858) Burkholderia phytofirmans PsJN 6283064 YP_001894320.1 CDS Bphyt_0672 NC_010681.1 736144 738033 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; KEGG: bxe:Bxe_A4027 ABC transporter fused ATPase and inner membrane subunits; ABC transporter 736144..738033 Burkholderia phytofirmans PsJN 6283065 YP_001894321.1 CDS Bphyt_0673 NC_010681.1 738105 738833 R PFAM: nucleotidyl transferase; KEGG: bxe:Bxe_A4026 nucleotidyl transferase; nucleotidyl transferase complement(738105..738833) Burkholderia phytofirmans PsJN 6283066 YP_001894322.1 CDS Bphyt_0674 NC_010681.1 738837 739928 R PFAM: aminoglycoside phosphotransferase; KEGG: bxe:Bxe_A4025 hypothetical protein; aminoglycoside phosphotransferase complement(738837..739928) Burkholderia phytofirmans PsJN 6283067 YP_001894323.1 CDS Bphyt_0675 NC_010681.1 740152 742518 D PFAM: organic solvent tolerance protein; KEGG: bxe:Bxe_A4024 organic solvent tolerance protein; organic solvent tolerance protein 740152..742518 Burkholderia phytofirmans PsJN 6283068 YP_001894324.1 CDS Bphyt_0676 NC_010681.1 742586 743947 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: bxe:Bxe_A4023 peptidyl-prolyl cis-trans isomerase; SurA domain 742586..743947 Burkholderia phytofirmans PsJN 6283069 YP_001894325.1 CDS pdxA NC_010681.1 743953 744963 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 743953..744963 Burkholderia phytofirmans PsJN 6283635 YP_001894326.1 CDS ksgA NC_010681.1 745116 745946 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 745116..745946 Burkholderia phytofirmans PsJN 6283636 YP_001894327.1 CDS Bphyt_0679 NC_010681.1 745991 746926 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A4020 10 TMS drug/metabolite exporter (DME)family, DMT superfamily; hypothetical protein complement(745991..746926) Burkholderia phytofirmans PsJN 6283637 YP_001894328.1 CDS Bphyt_0680 NC_010681.1 747186 748307 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A4019 outer membrane porin, OmpC family; porin 747186..748307 Burkholderia phytofirmans PsJN 6283638 YP_001894329.1 CDS Bphyt_0681 NC_010681.1 748395 748781 D KEGG: bxe:Bxe_A4018 glyoxalase I; TIGRFAM: lactoylglutathione lyase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 748395..748781 Burkholderia phytofirmans PsJN 6283639 YP_001894330.1 CDS Bphyt_0682 NC_010681.1 748807 749205 D KEGG: bxe:Bxe_A4017 hypothetical protein; hypothetical protein 748807..749205 Burkholderia phytofirmans PsJN 6283640 YP_001894331.1 CDS Bphyt_0683 NC_010681.1 749285 750187 R PFAM: protein of unknown function DUF45; KEGG: bxe:Bxe_A4016 hypothetical protein; hypothetical protein complement(749285..750187) Burkholderia phytofirmans PsJN 6283452 YP_001894332.1 CDS Bphyt_0684 NC_010681.1 750232 750990 R PFAM: phospholipid/glycerol acyltransferase; KEGG: bxe:Bxe_A4015 acyltransferase; phospholipid/glycerol acyltransferase complement(750232..750990) Burkholderia phytofirmans PsJN 6283453 YP_001894333.1 CDS Bphyt_0685 NC_010681.1 751031 751591 R Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase complement(751031..751591) Burkholderia phytofirmans PsJN 6283454 YP_001894334.1 CDS glyS NC_010681.1 751602 753701 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(751602..753701) Burkholderia phytofirmans PsJN 6283455 YP_001894335.1 CDS glyQ NC_010681.1 753717 754724 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(753717..754724) Burkholderia phytofirmans PsJN 6283456 YP_001894336.1 CDS Bphyt_0688 NC_010681.1 754942 756552 R PFAM: ferredoxin-dependent glutamate synthase; KEGG: bxe:Bxe_A4011 glutamate synthase (NADPH); ferredoxin-dependent glutamate synthase complement(754942..756552) Burkholderia phytofirmans PsJN 6283457 YP_001894337.1 CDS mnmA NC_010681.1 756778 757929 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(756778..757929) Burkholderia phytofirmans PsJN 6282429 YP_001894338.1 CDS Bphyt_0690 NC_010681.1 757988 758467 R PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A4009 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase complement(757988..758467) Burkholderia phytofirmans PsJN 6282430 YP_001894339.1 CDS Bphyt_0691 NC_010681.1 758679 759821 D PFAM: alanine dehydrogenase/PNT domain protein; KEGG: bxe:Bxe_A4008 NAD(P) transhydrogenase, subunit alpha; NAD(P)(+) transhydrogenase 758679..759821 Burkholderia phytofirmans PsJN 6282431 YP_001894340.1 CDS Bphyt_0692 NC_010681.1 759837 760163 D KEGG: bxe:Bxe_A4007 NAD(P) transhydrogenase subunit alpha; NAD(P) transhydrogenase subunit alpha 759837..760163 Burkholderia phytofirmans PsJN 6282432 YP_001894341.1 CDS Bphyt_0693 NC_010681.1 760163 761617 D PFAM: NAD(P) transhydrogenase subunit beta; KEGG: bxe:Bxe_A4006 NAD(P) transhydrogenase subunit beta; NAD(P)(+) transhydrogenase 760163..761617 Burkholderia phytofirmans PsJN 6282433 YP_001894342.1 CDS Bphyt_0694 NC_010681.1 761732 762472 R PFAM: hypothetical protein; KEGG: bxe:Bxe_A4005 transcriptional regulator; hypothetical protein complement(761732..762472) Burkholderia phytofirmans PsJN 6282434 YP_001894343.1 CDS Bphyt_0695 NC_010681.1 762543 762926 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A4004 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(762543..762926) Burkholderia phytofirmans PsJN 6281712 YP_001894344.1 CDS Bphyt_0696 NC_010681.1 763145 764446 R PFAM: RNA methylase; THUMP domain protein; KEGG: bxe:Bxe_A4003 hypothetical protein; RNA methylase complement(763145..764446) Burkholderia phytofirmans PsJN 6281713 YP_001894345.1 CDS Bphyt_0697 NC_010681.1 765230 767728 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(765230..767728) Burkholderia phytofirmans PsJN 6281714 YP_001894346.1 CDS queA NC_010681.1 767829 768887 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 767829..768887 Burkholderia phytofirmans PsJN 6281715 YP_001894347.1 CDS tgt NC_010681.1 769050 770264 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 769050..770264 Burkholderia phytofirmans PsJN 6281716 YP_001894348.1 CDS yajC NC_010681.1 770476 770805 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 770476..770805 Burkholderia phytofirmans PsJN 6281717 YP_001894349.1 CDS secD NC_010681.1 770924 772987 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 770924..772987 Burkholderia phytofirmans PsJN 6281445 YP_001894350.1 CDS secF NC_010681.1 773006 773956 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 773006..773956 Burkholderia phytofirmans PsJN 6281446 YP_001894351.1 CDS Bphyt_0703 NC_010681.1 774064 775341 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3994 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(774064..775341) Burkholderia phytofirmans PsJN 6281447 YP_001894352.1 CDS Bphyt_0704 NC_010681.1 775621 776202 R PFAM: YceI family protein; KEGG: bxe:Bxe_A3995 hypothetical protein; hypothetical protein complement(775621..776202) Burkholderia phytofirmans PsJN 6281448 YP_001894353.1 CDS Bphyt_0705 NC_010681.1 776259 776822 R PFAM: YceI family protein; KEGG: bxe:Bxe_A3996 hypothetical protein; hypothetical protein complement(776259..776822) Burkholderia phytofirmans PsJN 6281449 YP_001894354.1 CDS Bphyt_0706 NC_010681.1 776831 777391 R PFAM: cytochrome B561; KEGG: bxe:Bxe_A3997 cytochrome b-561 membrane protein; cytochrome B561 complement(776831..777391) Burkholderia phytofirmans PsJN 6281450 YP_001894355.1 CDS Bphyt_0707 NC_010681.1 777801 778586 D PFAM: paraquat-inducible protein A; KEGG: bxe:Bxe_A3998 paraquat-inducible protein; paraquat-inducible protein A 777801..778586 Burkholderia phytofirmans PsJN 6281731 YP_001894356.1 CDS Bphyt_0708 NC_010681.1 778594 779256 D PFAM: paraquat-inducible protein A; KEGG: bxe:Bxe_A3999 paraquat-inducible protein; paraquat-inducible protein A 778594..779256 Burkholderia phytofirmans PsJN 6281732 YP_001894357.1 CDS Bphyt_0709 NC_010681.1 779249 780907 D PFAM: hypothetical protein; KEGG: bxe:Bxe_A4000 paraquat-inducible protein; hypothetical protein 779249..780907 Burkholderia phytofirmans PsJN 6281733 YP_001894358.1 CDS Bphyt_0710 NC_010681.1 780904 781650 D PFAM: protein of unknown function DUF330; KEGG: bxe:Bxe_A4001 hypothetical protein; hypothetical protein 780904..781650 Burkholderia phytofirmans PsJN 6281734 YP_001894359.1 CDS Bphyt_0711 NC_010681.1 782438 783397 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3987 LysR family transcriptional regulator; LysR family transcriptional regulator 782438..783397 Burkholderia phytofirmans PsJN 6281735 YP_001894360.1 CDS Bphyt_0712 NC_010681.1 783827 785281 D PFAM: catalase domain protein; KEGG: bxe:Bxe_A3986 catalase; catalase 783827..785281 Burkholderia phytofirmans PsJN 6281736 YP_001894361.1 CDS Bphyt_0713 NC_010681.1 785368 785526 D KEGG: bxe:Bxe_A3985 hypothetical protein; hypothetical protein 785368..785526 Burkholderia phytofirmans PsJN 6281795 YP_001894362.1 CDS Bphyt_0714 NC_010681.1 785680 786177 D PFAM: ferritin; KEGG: bxe:Bxe_A3984 ferritin DPS-family DNA binding protein; ferritin 785680..786177 Burkholderia phytofirmans PsJN 6281796 YP_001894363.1 CDS Bphyt_0715 NC_010681.1 786396 787259 D TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: bxe:Bxe_A3983 4-hydroxybenzoate polyprenyl transferase; 4-hydroxybenzoate polyprenyltransferase 786396..787259 Burkholderia phytofirmans PsJN 6281797 YP_001894364.1 CDS Bphyt_0716 NC_010681.1 787321 788136 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(787321..788136) Burkholderia phytofirmans PsJN 6281798 YP_001894365.1 CDS Bphyt_0717 NC_010681.1 788200 788898 R PFAM: alanine racemase domain protein; KEGG: bxe:Bxe_A3981 protein of unknown function UPF0001; alanine racemase domain-containing protein complement(788200..788898) Burkholderia phytofirmans PsJN 6281799 YP_001894366.1 CDS glcF NC_010681.1 788936 790162 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_A3980 glycolate oxidase iron-sulfur subunit; glycolate oxidase iron-sulfur subunit complement(788936..790162) Burkholderia phytofirmans PsJN 6281800 YP_001894367.1 CDS glcE NC_010681.1 790171 791259 R PFAM: FAD linked oxidase; KEGG: bxe:Bxe_A3979 glycolate oxidase FAD binding subunit; glycolate oxidase FAD binding subunit complement(790171..791259) Burkholderia phytofirmans PsJN 6281661 YP_001894368.1 CDS Bphyt_0720 NC_010681.1 791409 792902 R PFAM: FAD linked oxidase; KEGG: bxe:Bxe_A3978 D-lactate dehydrogenase (cytochrome); FAD linked oxidase complement(791409..792902) Burkholderia phytofirmans PsJN 6281662 YP_001894369.1 CDS Bphyt_0721 NC_010681.1 792972 794387 R PFAM: FAD linked oxidase; KEGG: bxe:Bxe_A3977 FAD-binding oxidase; FAD linked oxidase complement(792972..794387) Burkholderia phytofirmans PsJN 6281663 YP_001894370.1 CDS Bphyt_0722 NC_010681.1 794604 795158 D TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: bxe:Bxe_A3976 protein of unknown function DUF80; ATP/cobalamin adenosyltransferase 794604..795158 Burkholderia phytofirmans PsJN 6281664 YP_001894371.1 CDS Bphyt_0723 NC_010681.1 795232 795564 R KEGG: bxe:Bxe_A3975 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(795232..795564) Burkholderia phytofirmans PsJN 6281665 YP_001894372.1 CDS Bphyt_0724 NC_010681.1 795584 795931 R PFAM: protein of unknown function DUF891; KEGG: bxe:Bxe_A3974 hypothetical protein; hypothetical protein complement(795584..795931) Burkholderia phytofirmans PsJN 6281666 YP_001894373.1 CDS Bphyt_0725 NC_010681.1 796121 797194 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(796121..797194) Burkholderia phytofirmans PsJN 6281201 YP_001894374.1 CDS Bphyt_0726 NC_010681.1 797573 799039 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bxe:Bxe_A3972 DNA gyrase control protein; peptidase U62 modulator of DNA gyrase complement(797573..799039) Burkholderia phytofirmans PsJN 6281202 YP_001894375.1 CDS Bphyt_0727 NC_010681.1 799142 799993 R PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bxe:Bxe_A3971 carbon-nitrogen hydrolase protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(799142..799993) Burkholderia phytofirmans PsJN 6281203 YP_001894376.1 CDS Bphyt_0728 NC_010681.1 800123 804409 R KEGG: bxe:Bxe_A3970 hypothetical protein; hypothetical protein complement(800123..804409) Burkholderia phytofirmans PsJN 6281204 YP_001894377.1 CDS Bphyt_0729 NC_010681.1 804500 807292 D PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: bxe:Bxe_A3969 glutamate-ammonia-ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 804500..807292 Burkholderia phytofirmans PsJN 6281205 YP_001894378.1 CDS Bphyt_0730 NC_010681.1 807582 809252 R KEGG: bxe:Bxe_A3968 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; SMART: ATPase AAA; DNA repair protein RecN complement(807582..809252) Burkholderia phytofirmans PsJN 6281206 YP_001894379.1 CDS ppnK NC_010681.1 809324 810226 R catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein complement(809324..810226) Burkholderia phytofirmans PsJN 6282089 YP_001894380.1 CDS hrcA NC_010681.1 810557 811576 D negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 810557..811576 Burkholderia phytofirmans PsJN 6282090 YP_001894381.1 CDS hemH NC_010681.1 811762 812832 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 811762..812832 Burkholderia phytofirmans PsJN 6282091 YP_001894382.1 CDS Bphyt_0734 NC_010681.1 812841 813248 D PFAM: RNA-binding S4 domain protein; KEGG: bxe:Bxe_A3964 heat shock protein 15; RNA-binding S4 domain-containing protein 812841..813248 Burkholderia phytofirmans PsJN 6282092 YP_001894383.1 CDS Bphyt_0735 NC_010681.1 813220 813381 R KEGG: bpd:BURPS668_3282 hypothetical protein; hypothetical protein complement(813220..813381) Burkholderia phytofirmans PsJN 6282093 YP_001894384.1 CDS Bphyt_0736 NC_010681.1 813772 814356 D PFAM: GrpE protein; KEGG: bxe:Bxe_A3963 heat shock protein; GrpE protein HSP-70 cofactor 813772..814356 Burkholderia phytofirmans PsJN 6282094 YP_001894385.1 CDS dnaK NC_010681.1 814840 816792 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 814840..816792 Burkholderia phytofirmans PsJN 6283491 YP_001894386.1 CDS Bphyt_0738 NC_010681.1 817072 818211 D TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: bxe:Bxe_A3960 DnaJ chaperone protein; chaperone protein DnaJ 817072..818211 Burkholderia phytofirmans PsJN 6283492 YP_001894387.1 CDS Bphyt_0739 NC_010681.1 818237 820153 D TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: chorismate binding-like; KEGG: bxe:Bxe_A3959 para-aminobenzoate synthase, component I; para-aminobenzoate synthase subunit I 818237..820153 Burkholderia phytofirmans PsJN 6283493 YP_001894388.1 CDS Bphyt_0740 NC_010681.1 820218 820364 R hypothetical protein complement(820218..820364) Burkholderia phytofirmans PsJN 6283494 YP_001894389.1 CDS panB NC_010681.1 820505 821320 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(820505..821320) Burkholderia phytofirmans PsJN 6283495 YP_001894390.1 CDS Bphyt_0742 NC_010681.1 821360 822040 R KEGG: bxe:Bxe_A3957 deoxynucleoside kinase; deoxynucleoside kinase complement(821360..822040) Burkholderia phytofirmans PsJN 6283496 YP_001894391.1 CDS Bphyt_0743 NC_010681.1 822037 822585 R KEGG: bxe:Bxe_A3956 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HppK; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(822037..822585) Burkholderia phytofirmans PsJN 6281163 YP_001894392.1 CDS Bphyt_0744 NC_010681.1 822634 824223 R KEGG: bxe:Bxe_A3955 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: polynucleotide adenylyltransferase region; poly(A) polymerase complement(822634..824223) Burkholderia phytofirmans PsJN 6281164 YP_001894393.1 CDS Bphyt_0745 NC_010681.1 824220 824906 R TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: bxe:Bxe_A3954 HAD-superfamily subfamily IB hydrolase, hypothetical 2; HAD family hydrolase complement(824220..824906) Burkholderia phytofirmans PsJN 6281165 YP_001894394.1 CDS Bphyt_0746 NC_010681.1 824899 825669 R TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; KEGG: bxe:Bxe_A3953 hypothetical protein; DnaA regulatory inactivator Hda complement(824899..825669) Burkholderia phytofirmans PsJN 6281166 YP_001894395.1 CDS Bphyt_0747 NC_010681.1 825742 826818 R PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_A3952 hypothetical protein; hypothetical protein complement(825742..826818) Burkholderia phytofirmans PsJN 6281167 YP_001894396.1 CDS Bphyt_0748 NC_010681.1 826890 827957 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 826890..827957 Burkholderia phytofirmans PsJN 6281168 YP_001894397.1 CDS miaA NC_010681.1 828042 829001 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(828042..829001) Burkholderia phytofirmans PsJN 6284442 YP_001894398.1 CDS mutL NC_010681.1 829035 831098 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(829035..831098) Burkholderia phytofirmans PsJN 6284443 YP_001894399.1 CDS Bphyt_0751 NC_010681.1 831305 831976 D PFAM: SNARE associated Golgi protein; KEGG: bxe:Bxe_A3933 DedA family transmembrane protein; hypothetical protein 831305..831976 Burkholderia phytofirmans PsJN 6284444 YP_001894400.1 CDS Bphyt_0752 NC_010681.1 832108 832920 R PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_A3932 small conductance mechanosensitive ion channel, (MscS) family; mechanosensitive ion channel protein MscS complement(832108..832920) Burkholderia phytofirmans PsJN 6284445 YP_001894401.1 CDS Bphyt_0753 NC_010681.1 833154 833612 R KEGG: bxe:Bxe_A3931 hypothetical protein; hypothetical protein complement(833154..833612) Burkholderia phytofirmans PsJN 6284446 YP_001894402.1 CDS Bphyt_0754 NC_010681.1 834010 835467 R PFAM: peptidase U34 dipeptidase; KEGG: spq:SPAB_02461 hypothetical protein; peptidase U34 dipeptidase complement(834010..835467) Burkholderia phytofirmans PsJN 6284447 YP_001894403.1 CDS Bphyt_0755 NC_010681.1 835707 836924 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1795 outer membrane porin, OmpC family; porin complement(835707..836924) Burkholderia phytofirmans PsJN 6284467 YP_001894404.1 CDS Bphyt_0757 NC_010681.1 838390 839148 R TIGRFAM: tol-pal system protein YbgF; KEGG: bxe:Bxe_A3922 transmembrane protein; tol-pal system protein YbgF complement(838390..839148) Burkholderia phytofirmans PsJN 6284470 YP_001894405.1 CDS Bphyt_0758 NC_010681.1 839159 839668 R TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_A3921 outer membrane protein, OmpA/MotB family; peptidoglycan-associated lipoprotein complement(839159..839668) Burkholderia phytofirmans PsJN 6284471 YP_001894406.1 CDS tolB NC_010681.1 839702 840994 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(839702..840994) Burkholderia phytofirmans PsJN 6284265 YP_001894407.1 CDS Bphyt_0760 NC_010681.1 841135 842169 R TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: bxe:Bxe_A3919 TonB protein; protein TolA complement(841135..842169) Burkholderia phytofirmans PsJN 6284266 YP_001894408.1 CDS Bphyt_0761 NC_010681.1 842166 842612 R TIGRFAM: protein TolR; PFAM: biopolymertransporter ExbD/TolR; KEGG: bxe:Bxe_A3918 biopolymer transporter ExbD/TolR; protein TolR complement(842166..842612) Burkholderia phytofirmans PsJN 6284267 YP_001894409.1 CDS Bphyt_0762 NC_010681.1 842623 843300 R TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A3917 biopolymer transporters, MotA/TolQ/ExbB family; protein TolQ complement(842623..843300) Burkholderia phytofirmans PsJN 6284268 YP_001894410.1 CDS Bphyt_0763 NC_010681.1 843456 843935 R TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A3916 4-hydroxybenzoyl-CoA thioesterase; tol-pal system-associated acyl-CoA thioesterase complement(843456..843935) Burkholderia phytofirmans PsJN 6284269 YP_001894411.1 CDS Bphyt_0764 NC_010681.1 844006 844752 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A3915 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(844006..844752) Burkholderia phytofirmans PsJN 6284270 YP_001894412.1 CDS glyA NC_010681.1 845269 846516 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 845269..846516 Burkholderia phytofirmans PsJN 6283385 YP_001894413.1 CDS nrdR NC_010681.1 846523 847005 D PFAM: ATP-cone domain protein; KEGG: bxe:Bxe_A3913 hypothetical protein; NrdR family transcriptional regulator 846523..847005 Burkholderia phytofirmans PsJN 6283386 YP_001894414.1 CDS Bphyt_0767 NC_010681.1 847210 847770 D KEGG: bxe:Bxe_A3912 hypothetical protein; hypothetical protein 847210..847770 Burkholderia phytofirmans PsJN 6283387 YP_001894415.1 CDS Bphyt_0768 NC_010681.1 847767 848213 D KEGG: bmu:Bmul_2578 hypothetical protein; hypothetical protein 847767..848213 Burkholderia phytofirmans PsJN 6283388 YP_001894416.1 CDS Bphyt_0769 NC_010681.1 848210 849022 D KEGG: bxe:Bxe_A3911 hypothetical protein; hypothetical protein 848210..849022 Burkholderia phytofirmans PsJN 6283389 YP_001894417.1 CDS Bphyt_0770 NC_010681.1 849019 849639 D KEGG: bxe:Bxe_A3910 hypothetical protein; hypothetical protein 849019..849639 Burkholderia phytofirmans PsJN 6283390 YP_001894418.1 CDS Bphyt_0771 NC_010681.1 849650 850078 D KEGG: bxe:Bxe_A3909 hypothetical protein; hypothetical protein 849650..850078 Burkholderia phytofirmans PsJN 6282218 YP_001894419.1 CDS Bphyt_0772 NC_010681.1 850117 850596 R KEGG: bxe:Bxe_A3908 hypothetical protein; hypothetical protein complement(850117..850596) Burkholderia phytofirmans PsJN 6282219 YP_001894420.1 CDS Bphyt_0773 NC_010681.1 850720 851106 R KEGG: bxe:Bxe_A3907 transmembrane protein; transmembrane protein complement(850720..851106) Burkholderia phytofirmans PsJN 6282220 YP_001894421.1 CDS Bphyt_0774 NC_010681.1 851241 851543 R PFAM: protein of unknown function DUF883 ElaB; KEGG: bxe:Bxe_A3906 hypothetical protein; hypothetical protein complement(851241..851543) Burkholderia phytofirmans PsJN 6282221 YP_001894422.1 CDS Bphyt_0775 NC_010681.1 851886 852524 D PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bxe:Bxe_A3905 peroxidase; peroxidase 851886..852524 Burkholderia phytofirmans PsJN 6282222 YP_001894423.1 CDS Bphyt_0776 NC_010681.1 852675 853865 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A3904 glutaryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(852675..853865) Burkholderia phytofirmans PsJN 6282223 YP_001894424.1 CDS Bphyt_0777 NC_010681.1 853970 854755 D PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: bxe:Bxe_A3903 IclR family transcriptional regulator; IclR family transcriptional regulator 853970..854755 Burkholderia phytofirmans PsJN 6283295 YP_001894425.1 CDS Bphyt_0778 NC_010681.1 854800 855669 R KEGG: bxe:Bxe_A3902 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase complement(854800..855669) Burkholderia phytofirmans PsJN 6283296 YP_001894426.1 CDS Bphyt_0779 NC_010681.1 855960 857324 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3901 major facilitator superfamily (MFS) 4-hydroxybenzoate transporter; major facilitator superfamily protein 855960..857324 Burkholderia phytofirmans PsJN 6283297 YP_001894427.1 CDS Bphyt_0780 NC_010681.1 857359 858705 D An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 857359..858705 Burkholderia phytofirmans PsJN 6283298 YP_001894428.1 CDS Bphyt_0781 NC_010681.1 858702 860012 D KEGG: bxe:Bxe_A3899 fumarylacetoacetase (HmgB); TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate hydrolase; Domain of unknown function DUF1969; fumarylacetoacetase 858702..860012 Burkholderia phytofirmans PsJN 6283299 YP_001894429.1 CDS Bphyt_0782 NC_010681.1 860086 861363 D PFAM: transposase mutator type; KEGG: bcm:Bcenmc03_6788 transposase mutator type; transposase mutator type 860086..861363 Burkholderia phytofirmans PsJN 6283300 YP_001894430.1 CDS Bphyt_0783 NC_010681.1 861695 862855 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3898 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(861695..862855) Burkholderia phytofirmans PsJN 6283076 YP_001894431.1 CDS Bphyt_0784 NC_010681.1 862929 864095 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3897 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(862929..864095) Burkholderia phytofirmans PsJN 6283077 YP_001894432.1 CDS Bphyt_0785 NC_010681.1 864289 865113 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(864289..865113) Burkholderia phytofirmans PsJN 6283078 YP_001894433.1 CDS Bphyt_0786 NC_010681.1 865206 865820 D KEGG: bxe:Bxe_A3895 hypothetical protein; hypothetical protein 865206..865820 Burkholderia phytofirmans PsJN 6283079 YP_001894434.1 CDS Bphyt_0787 NC_010681.1 865817 866815 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_A3894 D-lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(865817..866815) Burkholderia phytofirmans PsJN 6283080 YP_001894435.1 CDS Bphyt_0788 NC_010681.1 867341 869023 D TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: bxe:Bxe_A3893 aspartate/alanine exchanger family protein; YidE/YbjL protein 867341..869023 Burkholderia phytofirmans PsJN 6283081 YP_001894436.1 CDS Bphyt_0789 NC_010681.1 869125 870807 D TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: bxe:Bxe_A3892 aspartate/alanine exchanger family protein; YidE/YbjL protein 869125..870807 Burkholderia phytofirmans PsJN 6281134 YP_001894437.1 CDS Bphyt_0790 NC_010681.1 870897 872561 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 870897..872561 Burkholderia phytofirmans PsJN 6281135 YP_001894438.1 CDS Bphyt_0791 NC_010681.1 872727 873965 D PFAM: aminotransferase class V; KEGG: bch:Bcen2424_0828 aminotransferase, class V; class V aminotransferase 872727..873965 Burkholderia phytofirmans PsJN 6281136 YP_001894439.1 CDS Bphyt_0792 NC_010681.1 874098 875309 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3887 hypothetical protein; major facilitator superfamily transporter complement(874098..875309) Burkholderia phytofirmans PsJN 6281137 YP_001894440.1 CDS Bphyt_0793 NC_010681.1 875700 877223 D TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_A3886 xanthine dehydrogenase; xanthine dehydrogenase small subunit 875700..877223 Burkholderia phytofirmans PsJN 6281138 YP_001894441.1 CDS Bphyt_0794 NC_010681.1 877257 879623 D KEGG: bxe:Bxe_A3885 xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; xanthine dehydrogenase molybdopterin binding subunit 877257..879623 Burkholderia phytofirmans PsJN 6281139 YP_001894442.1 CDS Bphyt_0795 NC_010681.1 879693 880259 D TIGRFAM: xanthine dehydrogenase accessory protein XdhC; KEGG: bxe:Bxe_A3884 dehydrogenase; xanthine dehydrogenase accessory protein XdhC 879693..880259 Burkholderia phytofirmans PsJN 6281410 YP_001894443.1 CDS Bphyt_0796 NC_010681.1 880330 881310 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3883 LysR family transcriptional regulator; LysR family transcriptional regulator complement(880330..881310) Burkholderia phytofirmans PsJN 6281411 YP_001894444.1 CDS Bphyt_0797 NC_010681.1 881554 882204 R PFAM: DSBA oxidoreductase; KEGG: bxe:Bxe_A3882 isomerase; DSBA oxidoreductase complement(881554..882204) Burkholderia phytofirmans PsJN 6281412 YP_001894445.1 CDS Bphyt_0798 NC_010681.1 882298 883791 R KEGG: bxe:Bxe_A3881 hypothetical protein; hypothetical protein complement(882298..883791) Burkholderia phytofirmans PsJN 6281413 YP_001894446.1 CDS Bphyt_0799 NC_010681.1 884354 884707 D PFAM: transport-associated; SMART: transport-associated and nodulation region; KEGG: bxe:Bxe_A3880 periplasmic protein; transport-associated 884354..884707 Burkholderia phytofirmans PsJN 6281414 YP_001894447.1 CDS Bphyt_0800 NC_010681.1 884759 884911 D hypothetical protein 884759..884911 Burkholderia phytofirmans PsJN 6281415 YP_001894448.1 CDS Bphyt_0801 NC_010681.1 884959 885207 D KEGG: bxe:Bxe_A3879 hypothetical protein; hypothetical protein 884959..885207 Burkholderia phytofirmans PsJN 6283070 YP_001894449.1 CDS Bphyt_0802 NC_010681.1 885268 886056 R PFAM: protein of unknown function DUF81; KEGG: bxe:Bxe_A3878 hypothetical protein; hypothetical protein complement(885268..886056) Burkholderia phytofirmans PsJN 6283071 YP_001894450.1 CDS Bphyt_0804 NC_010681.1 886493 887134 R PFAM: lysine exporter (LYSE/YGGA); KEGG: bxe:Bxe_A3877 amino acid exporter, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA complement(886493..887134) Burkholderia phytofirmans PsJN 6283073 YP_001894451.1 CDS Bphyt_0805 NC_010681.1 887441 888334 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppu:PP_3395 LysR family transcriptional regulator; LysR family transcriptional regulator 887441..888334 Burkholderia phytofirmans PsJN 6283074 YP_001894452.1 CDS Bphyt_0806 NC_010681.1 888569 889546 D PFAM: pyruvate carboxyltransferase; KEGG: ppu:PP_3394 3-hydroxy-3-methylglutaryl-CoA lyase; pyruvate carboxyltransferase 888569..889546 Burkholderia phytofirmans PsJN 6283075 YP_001894453.1 CDS Bphyt_0807 NC_010681.1 889543 890781 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_B2438 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 889543..890781 Burkholderia phytofirmans PsJN 6283007 YP_001894454.1 CDS Bphyt_0808 NC_010681.1 890855 892339 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0920 major facilitator superfamily (MFS)metabolite/H+ symporter; major facilitator superfamily protein 890855..892339 Burkholderia phytofirmans PsJN 6283008 YP_001894455.1 CDS Bphyt_0809 NC_010681.1 892652 893107 R KEGG: olu:OSTLU_15788 predicted protein; hypothetical protein complement(892652..893107) Burkholderia phytofirmans PsJN 6283009 YP_001894456.1 CDS Bphyt_0810 NC_010681.1 893363 895339 R KEGG: bxe:Bxe_A3875 hypothetical protein; hypothetical protein complement(893363..895339) Burkholderia phytofirmans PsJN 6283010 YP_001894457.1 CDS Bphyt_0811 NC_010681.1 896153 897238 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3874 glycosyltransferase; group 1 glycosyl transferase 896153..897238 Burkholderia phytofirmans PsJN 6283011 YP_001894458.1 CDS Bphyt_0812 NC_010681.1 897287 899677 R KEGG: bxe:Bxe_A3873 hypothetical protein; hypothetical protein complement(897287..899677) Burkholderia phytofirmans PsJN 6283012 YP_001894459.1 CDS Bphyt_0813 NC_010681.1 899812 900267 R PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A3872 GDP-mannose mannosyl hydrolase; NUDIX hydrolase complement(899812..900267) Burkholderia phytofirmans PsJN 6284693 YP_001894460.1 CDS Bphyt_0814 NC_010681.1 900310 900459 R KEGG: bxe:Bxe_A3871 hypothetical protein; hypothetical protein complement(900310..900459) Burkholderia phytofirmans PsJN 6284694 YP_001894461.1 CDS Bphyt_0815 NC_010681.1 900573 902855 R KEGG: bxe:Bxe_A3870 hypothetical protein; hypothetical protein complement(900573..902855) Burkholderia phytofirmans PsJN 6284695 YP_001894462.1 CDS Bphyt_0816 NC_010681.1 903658 904641 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A3868 AraC family transcriptional regulator; AraC family transcriptional regulator 903658..904641 Burkholderia phytofirmans PsJN 6284696 YP_001894463.1 CDS Bphyt_0817 NC_010681.1 904729 906276 D KEGG: bxe:Bxe_A3867 mannose-1-phosphateguanylyl transferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 904729..906276 Burkholderia phytofirmans PsJN 6284697 YP_001894464.1 CDS Bphyt_0818 NC_010681.1 906330 907715 D TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bxe:Bxe_A3866 undecaprenyl-phosphate galactosephosphotransferase; undecaprenyl-phosphate glucose phosphotransferase 906330..907715 Burkholderia phytofirmans PsJN 6284698 YP_001894465.1 CDS Bphyt_0819 NC_010681.1 907781 908920 D PFAM: polysaccharide export protein; KEGG: bxe:Bxe_A3865 polysaccharide export protein; polysaccharide export protein 907781..908920 Burkholderia phytofirmans PsJN 6282316 YP_001894466.1 CDS Bphyt_0820 NC_010681.1 908970 911204 D KEGG: bxe:Bxe_A3864 exopolysaccharide export associated tyrosine kinase; TIGRFAM: exopolysaccharide transporter family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; exopolysaccharide transporter family 908970..911204 Burkholderia phytofirmans PsJN 6282317 YP_001894467.1 CDS Bphyt_0821 NC_010681.1 911288 912406 D TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_A3863 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 911288..912406 Burkholderia phytofirmans PsJN 6282318 YP_001894468.1 CDS Bphyt_0822 NC_010681.1 912412 913371 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: bxe:Bxe_A3862 nucleoside-diphosphate-sugar epimerases; NAD-dependent epimerase/dehydratase 912412..913371 Burkholderia phytofirmans PsJN 6282319 YP_001894469.1 CDS Bphyt_0823 NC_010681.1 913484 914626 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3861 glycosyltransferase; group 1 glycosyl transferase 913484..914626 Burkholderia phytofirmans PsJN 6282320 YP_001894470.1 CDS Bphyt_0824 NC_010681.1 914682 916034 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3860 predicted glycosyl transferase; glycosyl transferase 914682..916034 Burkholderia phytofirmans PsJN 6282321 YP_001894471.1 CDS Bphyt_0825 NC_010681.1 916066 916572 R KEGG: bxe:Bxe_A3859 hypothetical protein; hypothetical protein complement(916066..916572) Burkholderia phytofirmans PsJN 6284384 YP_001894472.1 CDS Bphyt_0826 NC_010681.1 916758 917378 D KEGG: bxe:Bxe_A3858 hypothetical protein; hypothetical protein 916758..917378 Burkholderia phytofirmans PsJN 6284385 YP_001894473.1 CDS Bphyt_0827 NC_010681.1 917599 919338 D PFAM: FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: bxe:Bxe_A3857 oxidoreductase; GMC oxidoreductase 917599..919338 Burkholderia phytofirmans PsJN 6284386 YP_001894474.1 CDS Bphyt_0828 NC_010681.1 919436 920656 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3856 transferase; group 1 glycosyl transferase complement(919436..920656) Burkholderia phytofirmans PsJN 6284387 YP_001894475.1 CDS Bphyt_0829 NC_010681.1 920671 922146 R KEGG: bxe:Bxe_A3855 hypothetical protein; hypothetical protein complement(920671..922146) Burkholderia phytofirmans PsJN 6284388 YP_001894476.1 CDS Bphyt_0830 NC_010681.1 922428 923582 D PFAM: acyltransferase 3; KEGG: bxe:Bxe_A3854 acyltransferase; acyltransferase 3 922428..923582 Burkholderia phytofirmans PsJN 6284389 YP_001894477.1 CDS Bphyt_0831 NC_010681.1 923700 924971 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3848 hypothetical protein; group 1 glycosyl transferase complement(923700..924971) Burkholderia phytofirmans PsJN 6282699 YP_001894478.1 CDS Bphyt_0832 NC_010681.1 925191 926489 D PFAM: polysaccharide biosynthesis protein; KEGG: bxe:Bxe_A3847 polysaccharide exporter, PST family, MOP superfamily; polysaccharide biosynthesis protein 925191..926489 Burkholderia phytofirmans PsJN 6282700 YP_001894479.1 CDS Bphyt_0833 NC_010681.1 926489 927562 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3846 glycosyltransferase; group 1 glycosyl transferase 926489..927562 Burkholderia phytofirmans PsJN 6282701 YP_001894480.1 CDS Bphyt_0834 NC_010681.1 927622 928833 R KEGG: bxe:Bxe_A3845 hypothetical protein; hypothetical protein complement(927622..928833) Burkholderia phytofirmans PsJN 6282702 YP_001894481.1 CDS Bphyt_0835 NC_010681.1 928944 929357 D KEGG: rci:RRC34 hypothetical protein; hypothetical protein 928944..929357 Burkholderia phytofirmans PsJN 6282703 YP_001894482.1 CDS Bphyt_0836 NC_010681.1 929825 930220 D hypothetical protein 929825..930220 Burkholderia phytofirmans PsJN 6282704 YP_001894483.1 CDS Bphyt_0837 NC_010681.1 930398 932188 R PFAM: hypothetical protein; chloride channel core; KEGG: bxe:Bxe_A3930 voltage-gated chloride channel with CBS domains; chloride channel core complement(930398..932188) Burkholderia phytofirmans PsJN 6282010 YP_001894484.1 CDS Bphyt_0838 NC_010681.1 932195 932608 R PFAM: regulatory protein MarR; KEGG: bxe:Bxe_A3929 MarR family transcriptional regulator; MarR family transcriptional regulator complement(932195..932608) Burkholderia phytofirmans PsJN 6282011 YP_001894485.1 CDS Bphyt_0839 NC_010681.1 932698 933864 R PFAM: hypothetical protein; HPP family protein?; KEGG: bxe:Bxe_A3928 hypothetical protein; hypothetical protein complement(932698..933864) Burkholderia phytofirmans PsJN 6282012 YP_001894486.1 CDS Bphyt_0840 NC_010681.1 934374 935192 R PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: rme:Rmet_3846 methyltransferase type 11; type 11 methyltransferase complement(934374..935192) Burkholderia phytofirmans PsJN 6282013 YP_001894487.1 CDS Bphyt_0841 NC_010681.1 935470 936000 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A1506 hypothetical protein; AraC family transcriptional regulator 935470..936000 Burkholderia phytofirmans PsJN 6282014 YP_001894488.1 CDS Bphyt_0842 NC_010681.1 935997 936413 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A1507 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 935997..936413 Burkholderia phytofirmans PsJN 6282015 YP_001894489.1 CDS Bphyt_0843 NC_010681.1 936438 938126 R KEGG: bxe:Bxe_A3853 hypothetical protein; hypothetical protein complement(936438..938126) Burkholderia phytofirmans PsJN 6284662 YP_001894490.1 CDS Bphyt_0844 NC_010681.1 938921 940375 D KEGG: bxe:Bxe_A3851 hypothetical protein; hypothetical protein 938921..940375 Burkholderia phytofirmans PsJN 6284663 YP_001894491.1 CDS Bphyt_0845 NC_010681.1 940712 943066 D KEGG: bxe:Bxe_A3850 protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein 940712..943066 Burkholderia phytofirmans PsJN 6284664 YP_001894492.1 CDS Bphyt_0846 NC_010681.1 943110 944270 D KEGG: bxe:Bxe_A3849 hypothetical protein; hypothetical protein 943110..944270 Burkholderia phytofirmans PsJN 6284665 YP_001894493.1 CDS Bphyt_0847 NC_010681.1 945030 946925 D KEGG: bxe:Bxe_A2516 predicted hydrolase of the alpha/beta superfamily; alpha/beta fold family hydrolase 945030..946925 Burkholderia phytofirmans PsJN 6284666 YP_001894494.1 CDS Bphyt_0848 NC_010681.1 947236 948408 D PFAM: glycosyl transferase group 1; KEGG: bte:BTH_I0521 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 947236..948408 Burkholderia phytofirmans PsJN 6284667 YP_001894495.1 CDS Bphyt_0849 NC_010681.1 948609 949868 D PFAM: polysaccharide biosynthesis protein; KEGG: gka:GK3317 O-antigen transporter; polysaccharide biosynthesis protein 948609..949868 Burkholderia phytofirmans PsJN 6282417 YP_001894496.1 CDS Bphyt_0850 NC_010681.1 949986 950957 R PFAM: glycosyl transferase family 2; KEGG: mth:MTH343 rhamnosyl transferase; family 2 glycosyl transferase complement(949986..950957) Burkholderia phytofirmans PsJN 6282418 YP_001894497.1 CDS Bphyt_0851 NC_010681.1 950954 952045 R KEGG: dge:Dgeo_2530 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; UDP-galactopyranose mutase complement(950954..952045) Burkholderia phytofirmans PsJN 6282419 YP_001894498.1 CDS Bphyt_0852 NC_010681.1 952462 952584 R hypothetical protein complement(952462..952584) Burkholderia phytofirmans PsJN 6282420 YP_001894499.1 CDS Bphyt_0853 NC_010681.1 953181 953462 D KEGG: bam:Bamb_6485 oxidoreductase; hypothetical protein 953181..953462 Burkholderia phytofirmans PsJN 6282421 YP_001894500.1 CDS Bphyt_0854 NC_010681.1 953531 954415 D PFAM: polysaccharide deacetylase; KEGG: bam:Bamb_6486 polysaccharide deacetylase; polysaccharide deacetylase 953531..954415 Burkholderia phytofirmans PsJN 6282422 YP_001894501.1 CDS Bphyt_0856 NC_010681.1 954930 956150 D PFAM: glycosyl transferase group 1; KEGG: bte:BTH_I0521 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 954930..956150 Burkholderia phytofirmans PsJN 6282906 YP_001894502.1 CDS Bphyt_0857 NC_010681.1 956368 956772 R KEGG: bxe:Bxe_A3819 hypothetical protein; hypothetical protein complement(956368..956772) Burkholderia phytofirmans PsJN 6282907 YP_001894503.1 CDS Bphyt_0858 NC_010681.1 956811 957092 R KEGG: bxe:Bxe_A3818 hypothetical protein; hypothetical protein complement(956811..957092) Burkholderia phytofirmans PsJN 6282908 YP_001894504.1 CDS Bphyt_0859 NC_010681.1 957402 958118 R PFAM: protein of unknown function DUF1568; KEGG: bmu:Bmul_0304 protein of unknown function DUF1568; hypothetical protein complement(957402..958118) Burkholderia phytofirmans PsJN 6282909 YP_001894505.1 CDS Bphyt_0860 NC_010681.1 958551 959798 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A2191 ABC sugar transporter periplasmic ligand binding protein; sugar ABC transporter substrate-binding protein complement(958551..959798) Burkholderia phytofirmans PsJN 6282910 YP_001894506.1 CDS Bphyt_0861 NC_010681.1 959872 961116 R PFAM: protein of unknown function DUF1479; KEGG: bxe:Bxe_A2192 cytoplasmic protein of unknown function(DUF1479); hypothetical protein complement(959872..961116) Burkholderia phytofirmans PsJN 6284448 YP_001894507.1 CDS Bphyt_0862 NC_010681.1 961212 962168 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A2193 AraC family transcriptional regulator; AraC family transcriptional regulator 961212..962168 Burkholderia phytofirmans PsJN 6284449 YP_001894508.1 CDS groES NC_010681.1 962585 962875 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 962585..962875 Burkholderia phytofirmans PsJN 6284450 YP_001894509.1 CDS groEL NC_010681.1 962931 964571 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 962931..964571 Burkholderia phytofirmans PsJN 6284451 YP_001894510.1 CDS Bphyt_0865 NC_010681.1 964746 965606 R PFAM: phosphomethylpyrimidine kinase type-1; KEGG: bxe:Bxe_A3814 hydroxymethylpyrimidine kinase; phosphomethylpyrimidine kinase type-1 complement(964746..965606) Burkholderia phytofirmans PsJN 6284452 YP_001894511.1 CDS Bphyt_0866 NC_010681.1 965896 966066 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bxe:Bxe_A3813 rubredoxin; rubredoxin-type Fe(Cys)4 protein 965896..966066 Burkholderia phytofirmans PsJN 6284453 YP_001894512.1 CDS Bphyt_0867 NC_010681.1 966322 967734 D KEGG: bxe:Bxe_A3812 hypothetical protein; hypothetical protein 966322..967734 Burkholderia phytofirmans PsJN 6281932 YP_001894513.1 CDS Bphyt_0868 NC_010681.1 967988 968566 D PFAM: protein of unknown function DUF179; KEGG: bxe:Bxe_A3811 hypothetical protein; hypothetical protein 967988..968566 Burkholderia phytofirmans PsJN 6281933 YP_001894514.1 CDS Bphyt_0869 NC_010681.1 968563 969003 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 968563..969003 Burkholderia phytofirmans PsJN 6281934 YP_001894515.1 CDS Bphyt_0870 NC_010681.1 968990 969529 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 968990..969529 Burkholderia phytofirmans PsJN 6281935 YP_001894516.1 CDS pyrB NC_010681.1 969726 970751 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 969726..970751 Burkholderia phytofirmans PsJN 6281936 YP_001894517.1 CDS Bphyt_0873 NC_010681.1 971346 972623 D PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: eba:p1B202 transposase; transposase IS891/IS1136/IS1341 family 971346..972623 Burkholderia phytofirmans PsJN 6283918 YP_001894518.1 CDS Bphyt_0874 NC_010681.1 972638 973915 D Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 972638..973915 Burkholderia phytofirmans PsJN 6283919 YP_001894519.1 CDS Bphyt_0875 NC_010681.1 974013 974858 D PFAM: phospholipid/glycerol acyltransferase; KEGG: bxe:Bxe_A3806 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase 974013..974858 Burkholderia phytofirmans PsJN 6283920 YP_001894520.1 CDS apaH NC_010681.1 974908 975786 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(974908..975786) Burkholderia phytofirmans PsJN 6283921 YP_001894521.1 CDS Bphyt_0877 NC_010681.1 975980 976891 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: bxe:Bxe_A3804 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 975980..976891 Burkholderia phytofirmans PsJN 6283922 YP_001894522.1 CDS Bphyt_0878 NC_010681.1 977361 978422 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bxe:Bxe_A3803 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 977361..978422 Burkholderia phytofirmans PsJN 6283923 YP_001894523.1 CDS Bphyt_0879 NC_010681.1 978433 979326 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: bxe:Bxe_B1715 glucose-1-phosphate thymidylyltransferase, longform; glucose-1-phosphate thymidylyltransferase 978433..979326 Burkholderia phytofirmans PsJN 6282237 YP_001894524.1 CDS Bphyt_0880 NC_010681.1 979311 979862 D KEGG: bcm:Bcenmc03_0844 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 979311..979862 Burkholderia phytofirmans PsJN 6282238 YP_001894525.1 CDS Bphyt_0881 NC_010681.1 979872 980768 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bmu:Bmul_2599 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 979872..980768 Burkholderia phytofirmans PsJN 6282239 YP_001894526.1 CDS Bphyt_0882 NC_010681.1 980765 981661 D TIGRFAM: rhamnosyltransferase; KEGG: bcm:Bcenmc03_0846 rhamnosyltransferase; rhamnosyltransferase 980765..981661 Burkholderia phytofirmans PsJN 6282240 YP_001894527.1 CDS Bphyt_0883 NC_010681.1 981743 983914 D PFAM: glycosyl transferase family 2; KEGG: ppf:Pput_3926 glycosyl transferase, family 2; family 2 glycosyl transferase 981743..983914 Burkholderia phytofirmans PsJN 6282241 YP_001894528.1 CDS Bphyt_0884 NC_010681.1 984140 984928 D PFAM: ABC transporter; KEGG: pfo:Pfl_4049 ABC-2; ABC transporter 984140..984928 Burkholderia phytofirmans PsJN 6282242 YP_001894529.1 CDS Bphyt_0885 NC_010681.1 984985 987438 D PFAM: glycosyl transferase family 2; KEGG: asa:ASA_1441 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 984985..987438 Burkholderia phytofirmans PsJN 6282128 YP_001894530.1 CDS Bphyt_0886 NC_010681.1 987522 989003 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: azo:azo3596 polysaccharide export transporter ATP-binding protein; ABC transporter 987522..989003 Burkholderia phytofirmans PsJN 6282129 YP_001894531.1 CDS Bphyt_0887 NC_010681.1 989089 993141 D PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_1408 glycosyl transferase family 2; group 1 glycosyl transferase 989089..993141 Burkholderia phytofirmans PsJN 6282130 YP_001894532.1 CDS Bphyt_0888 NC_010681.1 993169 994305 D PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rso:RSp1017 UDP-N-acetylglucosamine 2-epimerase protein; UDP-N-acetylglucosamine 2-epimerase 993169..994305 Burkholderia phytofirmans PsJN 6282131 YP_001894533.1 CDS Bphyt_0889 NC_010681.1 994426 995727 D KEGG: bxe:Bxe_A3796 hypothetical protein; hypothetical protein 994426..995727 Burkholderia phytofirmans PsJN 6282132 YP_001894534.1 CDS Bphyt_0890 NC_010681.1 995925 997088 D PFAM: acyltransferase 3; KEGG: btk:BT9727_2535 acyltransferase family protein; acyltransferase 3 995925..997088 Burkholderia phytofirmans PsJN 6282133 YP_001894535.1 CDS Bphyt_0891 NC_010681.1 997097 998356 D KEGG: bxe:Bxe_A3796 hypothetical protein; hypothetical protein 997097..998356 Burkholderia phytofirmans PsJN 6281363 YP_001894536.1 CDS Bphyt_0892 NC_010681.1 998410 998835 R KEGG: bxe:Bxe_A3790 hypothetical protein; hypothetical protein complement(998410..998835) Burkholderia phytofirmans PsJN 6281364 YP_001894537.1 CDS Bphyt_0893 NC_010681.1 998832 1000115 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: bxe:Bxe_A3789 hypothetical protein; hypothetical protein complement(998832..1000115) Burkholderia phytofirmans PsJN 6281365 YP_001894538.1 CDS Bphyt_0894 NC_010681.1 1000129 1001067 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bxe:Bxe_A3788 transmembrane oxidoreductase protein; NAD-dependent epimerase/dehydratase complement(1000129..1001067) Burkholderia phytofirmans PsJN 6281366 YP_001894539.1 CDS Bphyt_0895 NC_010681.1 1001193 1002908 R KEGG: bxe:Bxe_A3787 transmembrane protein; transmembrane protein complement(1001193..1002908) Burkholderia phytofirmans PsJN 6281367 YP_001894540.1 CDS Bphyt_0896 NC_010681.1 1002924 1003664 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A3786 short chain dehydrogenase; short chain dehydrogenase complement(1002924..1003664) Burkholderia phytofirmans PsJN 6281368 YP_001894541.1 CDS Bphyt_0897 NC_010681.1 1003661 1004977 R PFAM: FAD linked oxidase; KEGG: bxe:Bxe_A3785 hypothetical protein; FAD linked oxidase complement(1003661..1004977) Burkholderia phytofirmans PsJN 6283761 YP_001894542.1 CDS Bphyt_0898 NC_010681.1 1004981 1006405 R PFAM: UbiA prenyltransferase; KEGG: bxe:Bxe_A3784 hypothetical protein; hypothetical protein complement(1004981..1006405) Burkholderia phytofirmans PsJN 6283762 YP_001894543.1 CDS Bphyt_0899 NC_010681.1 1006783 1007628 D PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A3783 glycosyl transferase; family 2 glycosyl transferase 1006783..1007628 Burkholderia phytofirmans PsJN 6283763 YP_001894544.1 CDS Bphyt_0900 NC_010681.1 1007625 1008581 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bxe:Bxe_A3782 epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1007625..1008581 Burkholderia phytofirmans PsJN 6283764 YP_001894545.1 CDS Bphyt_0901 NC_010681.1 1008589 1009620 D PFAM: glycosyl transferase family 4; KEGG: bxe:Bxe_A3781 glycosyl transferase; glycosyl transferase 1008589..1009620 Burkholderia phytofirmans PsJN 6283765 YP_001894546.1 CDS Bphyt_0902 NC_010681.1 1009626 1011503 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bxe:Bxe_A3780 epimerase/dehydratase polysaccharide-related biosynthesis protein; polysaccharide biosynthesis protein CapD 1009626..1011503 Burkholderia phytofirmans PsJN 6283766 YP_001894547.1 CDS Bphyt_0903 NC_010681.1 1011565 1012665 R PFAM: glycosyl transferase family 4; KEGG: bxe:Bxe_A3732 undecaprenyl phosphate N-acetylglucosaminyltransferase; glycosyl transferase complement(1011565..1012665) Burkholderia phytofirmans PsJN 6283852 YP_001894548.1 CDS Bphyt_0904 NC_010681.1 1012933 1014480 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A3731 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1012933..1014480 Burkholderia phytofirmans PsJN 6283853 YP_001894549.1 CDS Bphyt_0905 NC_010681.1 1015206 1015937 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: bxe:Bxe_A3729 Crp/Fnr family transcriptional regulator; Crp/Fnr family transcriptional regulator 1015206..1015937 Burkholderia phytofirmans PsJN 6283854 YP_001894550.1 CDS Bphyt_0907 NC_010681.1 1017401 1018549 D PFAM: glycosyl transferase family 9; KEGG: bxe:Bxe_A3715 hypothetical protein; glycosyl transferase 1017401..1018549 Burkholderia phytofirmans PsJN 6283856 YP_001894551.1 CDS Bphyt_0908 NC_010681.1 1018530 1019573 D TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: bxe:Bxe_A3714 carbohydrate kinase; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 1018530..1019573 Burkholderia phytofirmans PsJN 6283857 YP_001894552.1 CDS Bphyt_0909 NC_010681.1 1019655 1020788 R PFAM: N-acylglucosamine 2-epimerase; KEGG: bxe:Bxe_A3713 isomerase; N-acylglucosamine 2-epimerase complement(1019655..1020788) Burkholderia phytofirmans PsJN 6284013 YP_001894553.1 CDS Bphyt_0910 NC_010681.1 1020809 1022062 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3712 glycosyl transferases group 1 protein; group 1 glycosyl transferase complement(1020809..1022062) Burkholderia phytofirmans PsJN 6284014 YP_001894554.1 CDS Bphyt_0911 NC_010681.1 1022373 1023332 R PFAM: sugar transferase; KEGG: bxe:Bxe_A3711 undecaprenyl-phosphate galactosephosphotransferase; undecaprenyl-phosphate galactose phosphotransferase complement(1022373..1023332) Burkholderia phytofirmans PsJN 6284015 YP_001894555.1 CDS Bphyt_0912 NC_010681.1 1024175 1024909 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A3709 ABC branched chain amino acid family transporter ATPase subunit; branched-chain amino acid ABC transporter ATPase complement(1024175..1024909) Burkholderia phytofirmans PsJN 6284016 YP_001894556.1 CDS Bphyt_0913 NC_010681.1 1024939 1026879 R PFAM: inner-membrane translocator; ABC transporter related; SMART: ATPase AAA; KEGG: bxe:Bxe_A3708 ABC branched chain amino acid family transporter fused ATPase and inner membrane subunit; branched-chain amino acid ABC transporter ATPase/inner membrane protein complement(1024939..1026879) Burkholderia phytofirmans PsJN 6284017 YP_001894557.1 CDS Bphyt_0914 NC_010681.1 1026888 1027763 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A3707 ABC branched chain amino acid family transporter inner membrane subunit; branched-chain amino acid ABC transporter inner membrane protein complement(1026888..1027763) Burkholderia phytofirmans PsJN 6284018 YP_001894558.1 CDS Bphyt_0915 NC_010681.1 1027872 1029089 R PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A3706 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched chain amino acid ABC transporter substrate-binding protein complement(1027872..1029089) Burkholderia phytofirmans PsJN 6281429 YP_001894559.1 CDS Bphyt_0916 NC_010681.1 1029314 1030336 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KR domain protein; KEGG: bxe:Bxe_A3705 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(1029314..1030336) Burkholderia phytofirmans PsJN 6281430 YP_001894560.1 CDS Bphyt_0917 NC_010681.1 1030349 1031497 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3704 glycosyl transferase; group 1 glycosyl transferase complement(1030349..1031497) Burkholderia phytofirmans PsJN 6281431 YP_001894561.1 CDS Bphyt_0918 NC_010681.1 1031537 1032367 R PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A3703 glycosyl transferase; family 2 glycosyl transferase complement(1031537..1032367) Burkholderia phytofirmans PsJN 6281432 YP_001894562.1 CDS Bphyt_0919 NC_010681.1 1032364 1033626 R PFAM: polysaccharide biosynthesis protein; KEGG: bxe:Bxe_A3702 polysaccharide exporter, PST family; polysaccharide biosynthesis protein complement(1032364..1033626) Burkholderia phytofirmans PsJN 6281433 YP_001894563.1 CDS Bphyt_0920 NC_010681.1 1033928 1035322 D PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bxe:Bxe_A3701 phosphomannomutase; phosphomannomutase 1033928..1035322 Burkholderia phytofirmans PsJN 6281434 YP_001894564.1 CDS Bphyt_0921 NC_010681.1 1035536 1036537 D TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: bxe:Bxe_A3700 lipopolysaccharide heptosyltransferase-1; lipopolysaccharide heptosyltransferase I 1035536..1036537 Burkholderia phytofirmans PsJN 6281565 YP_001894565.1 CDS Bphyt_0922 NC_010681.1 1036587 1037471 D KEGG: bxe:Bxe_A3699 hypothetical protein; hypothetical protein 1036587..1037471 Burkholderia phytofirmans PsJN 6281566 YP_001894566.1 CDS Bphyt_0923 NC_010681.1 1037539 1038855 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 1037539..1038855 Burkholderia phytofirmans PsJN 6281567 YP_001894567.1 CDS Bphyt_0924 NC_010681.1 1038967 1039677 D KEGG: plu:plu0253 hypothetical protein; hypothetical protein 1038967..1039677 Burkholderia phytofirmans PsJN 6281568 YP_001894568.1 CDS Bphyt_0925 NC_010681.1 1039682 1040335 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: bxe:Bxe_A3697 urease accessory protein UreG; urease accessory protein UreG complement(1039682..1040335) Burkholderia phytofirmans PsJN 6281569 YP_001894569.1 CDS Bphyt_0926 NC_010681.1 1040347 1041027 R PFAM: Urease accessory protein UreF; KEGG: bxe:Bxe_A3696 urease accessory protein UreF; urease accessory protein UreF complement(1040347..1041027) Burkholderia phytofirmans PsJN 6281570 YP_001894570.1 CDS ureE NC_010681.1 1041014 1041697 R involved in the assembly of the urease metallocenter; nickel donor; urease accessory protein UreE complement(1041014..1041697) Burkholderia phytofirmans PsJN 6282159 YP_001894571.1 CDS ureC NC_010681.1 1041700 1043406 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(1041700..1043406) Burkholderia phytofirmans PsJN 6282160 YP_001894572.1 CDS Bphyt_0929 NC_010681.1 1043465 1043770 R KEGG: bxe:Bxe_A3693 urease subunit beta; TIGRFAM: urease, subunit beta; PFAM: Urease subunit beta; urease subunit beta complement(1043465..1043770) Burkholderia phytofirmans PsJN 6282161 YP_001894573.1 CDS ureA NC_010681.1 1043786 1044088 R UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma complement(1043786..1044088) Burkholderia phytofirmans PsJN 6282162 YP_001894574.1 CDS Bphyt_0931 NC_010681.1 1044264 1045067 R PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A3691 ABC amino acid transporter periplasmic ligand binding protein; family 3 extracellular solute-binding protein complement(1044264..1045067) Burkholderia phytofirmans PsJN 6282163 YP_001894575.1 CDS Bphyt_0932 NC_010681.1 1045319 1046404 R KEGG: bxe:Bxe_A3690 hypothetical protein; hypothetical protein complement(1045319..1046404) Burkholderia phytofirmans PsJN 6282164 YP_001894576.1 CDS Bphyt_0933 NC_010681.1 1046459 1048156 R KEGG: bxe:Bxe_A3689 hypothetical protein; hypothetical protein complement(1046459..1048156) Burkholderia phytofirmans PsJN 6284527 YP_001894577.1 CDS Bphyt_0934 NC_010681.1 1048323 1052312 R TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bxe:Bxe_A2085 membrane protein, SciS/IcmF-like; type VI secretion protein IcmF complement(1048323..1052312) Burkholderia phytofirmans PsJN 6284528 YP_001894578.1 CDS Bphyt_0935 NC_010681.1 1052341 1053585 R TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_A2088 hypothetical protein; hypothetical protein complement(1052341..1053585) Burkholderia phytofirmans PsJN 6284529 YP_001894579.1 CDS Bphyt_0936 NC_010681.1 1053731 1055074 R TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bpd:BURPS668_A0329 hypothetical protein; type VI secretion protein complement(1053731..1055074) Burkholderia phytofirmans PsJN 6284530 YP_001894580.1 CDS Bphyt_0937 NC_010681.1 1055087 1055599 R TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: bxe:Bxe_A2090 outer membrane lipoprotein; type VI secretion lipoprotein complement(1055087..1055599) Burkholderia phytofirmans PsJN 6284531 YP_001894581.1 CDS Bphyt_0938 NC_010681.1 1055671 1056153 R PFAM: protein of unknown function DUF796; KEGG: bxe:Bxe_A2091 cytoplasmic protein; hypothetical protein complement(1055671..1056153) Burkholderia phytofirmans PsJN 6284532 YP_001894582.1 CDS Bphyt_0939 NC_010681.1 1056373 1056804 R KEGG: stt:t0734 hypothetical protein; hypothetical protein complement(1056373..1056804) Burkholderia phytofirmans PsJN 6280939 YP_001894583.1 CDS Bphyt_0940 NC_010681.1 1056906 1058405 R TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: bxe:Bxe_A2094 cytoplasmic protein; type VI secretion protein EvpB complement(1056906..1058405) Burkholderia phytofirmans PsJN 6280940 YP_001894584.1 CDS Bphyt_0941 NC_010681.1 1058476 1059021 R TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bam:Bamb_3474 uncharacterised conserved protein UCP028301; type VI secretion protein complement(1058476..1059021) Burkholderia phytofirmans PsJN 6280941 YP_001894585.1 CDS Bphyt_0942 NC_010681.1 1059058 1061778 R KEGG: bam:Bamb_3473 ATPase AAA; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA; type VI secretion ATPase, ClpV1 family complement(1059058..1061778) Burkholderia phytofirmans PsJN 6280942 YP_001894586.1 CDS Bphyt_0943 NC_010681.1 1062472 1063080 D KEGG: bmn:BMA10247_A2180 hypothetical protein; hypothetical protein 1062472..1063080 Burkholderia phytofirmans PsJN 6280943 YP_001894587.1 CDS Bphyt_0944 NC_010681.1 1063077 1063949 D PFAM: virulence protein SciE type; KEGG: bam:Bamb_3471 virulence protein, SciE type; virulence protein SciE type 1063077..1063949 Burkholderia phytofirmans PsJN 6280944 YP_001894588.1 CDS Bphyt_0945 NC_010681.1 1063946 1064482 D TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: bxe:Bxe_A4432 hypothetical protein; type VI secretion system lysozyme-like protein 1063946..1064482 Burkholderia phytofirmans PsJN 6284165 YP_001894589.1 CDS Bphyt_0946 NC_010681.1 1064498 1066387 D TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bxe:Bxe_A4431 hypothetical protein; type VI secretion protein 1064498..1066387 Burkholderia phytofirmans PsJN 6284166 YP_001894590.1 CDS Bphyt_0947 NC_010681.1 1066387 1067499 D TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: bpd:BURPS668_A0340 hypothetical protein; type VI secretion protein 1066387..1067499 Burkholderia phytofirmans PsJN 6284167 YP_001894591.1 CDS Bphyt_0948 NC_010681.1 1067492 1068598 D PFAM: ImpA domain protein; KEGG: bxe:Bxe_A2098 conserved hypothetical cytoplasmic protein; ImpA domain-containing protein 1067492..1068598 Burkholderia phytofirmans PsJN 6284168 YP_001894592.1 CDS Bphyt_0949 NC_010681.1 1068876 1069757 R PFAM: Urease accessory protein UreD; KEGG: bxe:Bxe_A3688 urease accessory protein; urease accessory protein UreD complement(1068876..1069757) Burkholderia phytofirmans PsJN 6284169 YP_001894593.1 CDS Bphyt_0950 NC_010681.1 1069875 1070567 R KEGG: bxe:Bxe_A3687 ABC branched chain amino acid family transporter ATPase; TIGRFAM: urea ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter; SMART: ATPase AAA; urea ABC transporter ATP-binding protein complement(1069875..1070567) Burkholderia phytofirmans PsJN 6284170 YP_001894594.1 CDS Bphyt_0951 NC_010681.1 1070600 1071466 R TIGRFAM: urea ABC transporter ATP-binding protein UrtD; PFAM: ABC transporter; KEGG: bxe:Bxe_A3686 ABC branched chain amino acid family transporter ATPase; urea ABC transporter ATP-binding protein complement(1070600..1071466) Burkholderia phytofirmans PsJN 6282435 YP_001894595.1 CDS Bphyt_0952 NC_010681.1 1071463 1072647 R TIGRFAM: urea ABC transporter permease UrtC; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A3685 ABC branched chain amino acid family transporter inner membrane subunit; urea ABC transporter permease complement(1071463..1072647) Burkholderia phytofirmans PsJN 6282436 YP_001894596.1 CDS Bphyt_0953 NC_010681.1 1072649 1074298 R TIGRFAM: urea ABC transporter permease UrtB; PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A3684 ABC branched chain amino acid family transporter inner membrane subunit; urea ABC transporter permease complement(1072649..1074298) Burkholderia phytofirmans PsJN 6282437 YP_001894597.1 CDS Bphyt_0954 NC_010681.1 1074509 1075804 R TIGRFAM: urea ABC transporter urea binding protein; KEGG: bxe:Bxe_A3683 ABC branched chain amino acid family transporter periplasmic ligand binding protein; urea ABC transporter substrate-binding protein complement(1074509..1075804) Burkholderia phytofirmans PsJN 6282438 YP_001894598.1 CDS Bphyt_0955 NC_010681.1 1076283 1077926 R KEGG: bxe:Bxe_A3682 hypothetical protein; hypothetical protein complement(1076283..1077926) Burkholderia phytofirmans PsJN 6282439 YP_001894599.1 CDS Bphyt_0956 NC_010681.1 1077923 1078375 R KEGG: bxe:Bxe_A3681 hypothetical protein; hypothetical protein complement(1077923..1078375) Burkholderia phytofirmans PsJN 6282440 YP_001894600.1 CDS Bphyt_0957 NC_010681.1 1078520 1079851 R KEGG: bxe:Bxe_A3680 hypothetical protein; hypothetical protein complement(1078520..1079851) Burkholderia phytofirmans PsJN 6283962 YP_001894601.1 CDS Bphyt_0958 NC_010681.1 1079867 1080334 R KEGG: bxe:Bxe_A3679 hypothetical protein; hypothetical protein complement(1079867..1080334) Burkholderia phytofirmans PsJN 6283963 YP_001894602.1 CDS Bphyt_0959 NC_010681.1 1080760 1081083 R PFAM: rhodanese; KEGG: bxe:Bxe_A3678 hypothetical protein; rhodanese complement(1080760..1081083) Burkholderia phytofirmans PsJN 6283964 YP_001894603.1 CDS Bphyt_0960 NC_010681.1 1081141 1081794 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; methyltransferase type 11; KEGG: bxe:Bxe_A3677 protein-L-isoaspartate(D-aspartate)O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(1081141..1081794) Burkholderia phytofirmans PsJN 6283965 YP_001894604.1 CDS Bphyt_0961 NC_010681.1 1082113 1083192 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A3676 transcriptional regulator, LacI family; LacI family transcriptional regulator 1082113..1083192 Burkholderia phytofirmans PsJN 6283966 YP_001894605.1 CDS Bphyt_0962 NC_010681.1 1083195 1084682 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A3675 ABC sugar transporter ATPase; ABC transporter 1083195..1084682 Burkholderia phytofirmans PsJN 6283967 YP_001894606.1 CDS Bphyt_0963 NC_010681.1 1084663 1085676 D PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A3674 ABC sugar transporter inner membrane subunit; sugar ABC transporter ATPase 1084663..1085676 Burkholderia phytofirmans PsJN 6283270 YP_001894607.1 CDS Bphyt_0964 NC_010681.1 1085767 1086729 D KEGG: bxe:Bxe_A3673 ABC sugar transporter periplasmic ligand binding protein; sugar ABC transporter substrate-binding protein 1085767..1086729 Burkholderia phytofirmans PsJN 6283271 YP_001894608.1 CDS Bphyt_0965 NC_010681.1 1086820 1087869 D PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: bxe:Bxe_A3672 hypothetical protein; xylose isomerase 1086820..1087869 Burkholderia phytofirmans PsJN 6283272 YP_001894609.1 CDS Bphyt_0966 NC_010681.1 1087903 1089057 D PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bxe:Bxe_A3671 oxidoreductase; oxidoreductase domain-containing protein 1087903..1089057 Burkholderia phytofirmans PsJN 6283273 YP_001894610.1 CDS Bphyt_0967 NC_010681.1 1089108 1089368 R KEGG: bxe:Bxe_A3670 hypothetical protein; hypothetical protein complement(1089108..1089368) Burkholderia phytofirmans PsJN 6283274 YP_001894611.1 CDS Bphyt_0968 NC_010681.1 1089645 1090814 R KEGG: bxe:Bxe_A3666 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched chain amino acid ABC transporter substrate-binding protein complement(1089645..1090814) Burkholderia phytofirmans PsJN 6283275 YP_001894612.1 CDS Bphyt_0969 NC_010681.1 1090849 1091790 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3665 transcriptional regulator CysB-like protein; transcriptional regulator complement(1090849..1091790) Burkholderia phytofirmans PsJN 6283001 YP_001894613.1 CDS Bphyt_0970 NC_010681.1 1092011 1093690 D PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: bxe:Bxe_A3664 sulfite reductase; ferredoxin--nitrite reductase 1092011..1093690 Burkholderia phytofirmans PsJN 6283002 YP_001894614.1 CDS Bphyt_0971 NC_010681.1 1093713 1094252 D PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A3663 hypothetical protein; hypothetical protein 1093713..1094252 Burkholderia phytofirmans PsJN 6283003 YP_001894615.1 CDS Bphyt_0972 NC_010681.1 1094249 1094995 D catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 1094249..1094995 Burkholderia phytofirmans PsJN 6283004 YP_001894616.1 CDS Bphyt_0973 NC_010681.1 1095106 1096068 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1095106..1096068 Burkholderia phytofirmans PsJN 6283005 YP_001894617.1 CDS Bphyt_0974 NC_010681.1 1096094 1097410 D KEGG: bxe:Bxe_A3660 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase, large subunit 1096094..1097410 Burkholderia phytofirmans PsJN 6283006 YP_001894618.1 CDS Bphyt_0975 NC_010681.1 1097476 1098231 D catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 1097476..1098231 Burkholderia phytofirmans PsJN 6282719 YP_001894619.1 CDS Bphyt_0976 NC_010681.1 1098246 1099271 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pde:Pden_4528 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator complement(1098246..1099271) Burkholderia phytofirmans PsJN 6282720 YP_001894620.1 CDS Bphyt_0977 NC_010681.1 1099405 1100337 D PFAM: protein of unknown function DUF849; KEGG: ppw:PputW619_4531 protein of unknown function DUF849; hypothetical protein 1099405..1100337 Burkholderia phytofirmans PsJN 6282721 YP_001894621.1 CDS Bphyt_0978 NC_010681.1 1100433 1101776 D PFAM: major facilitator superfamily MFS_1; KEGG: mkm:Mkms_4289 major facilitator superfamily MFS_1; major facilitator superfamily protein 1100433..1101776 Burkholderia phytofirmans PsJN 6282722 YP_001894622.1 CDS Bphyt_0979 NC_010681.1 1101818 1102558 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2307 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 1101818..1102558 Burkholderia phytofirmans PsJN 6282723 YP_001894623.1 CDS Bphyt_0980 NC_010681.1 1102575 1103366 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpt:Bpet3908 probable short chain dehydrogenase; short chain dehydrogenase 1102575..1103366 Burkholderia phytofirmans PsJN 6282724 YP_001894624.1 CDS Bphyt_0981 NC_010681.1 1103444 1103827 R PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: bxe:Bxe_A3641 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein complement(1103444..1103827) Burkholderia phytofirmans PsJN 6284177 YP_001894625.1 CDS Bphyt_0982 NC_010681.1 1103839 1104987 R PFAM: permease YjgP/YjgQ family protein; KEGG: bxe:Bxe_A3640 membrane protein, YjgP/YjgQ like; YjgP/YjgQ family permease complement(1103839..1104987) Burkholderia phytofirmans PsJN 6284178 YP_001894626.1 CDS Bphyt_0983 NC_010681.1 1104991 1106088 R PFAM: permease YjgP/YjgQ family protein; KEGG: bxe:Bxe_A3639 membrane protein, YjgP/YjgQ like; YjgP/YjgQ family permease complement(1104991..1106088) Burkholderia phytofirmans PsJN 6284179 YP_001894627.1 CDS Bphyt_0984 NC_010681.1 1106226 1107752 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1106226..1107752 Burkholderia phytofirmans PsJN 6284180 YP_001894628.1 CDS Bphyt_0985 NC_010681.1 1107811 1108227 D binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 1107811..1108227 Burkholderia phytofirmans PsJN 6284181 YP_001894629.1 CDS Bphyt_0986 NC_010681.1 1108325 1109029 D KEGG: bxe:Bxe_A3636 hypothetical protein; hypothetical protein 1108325..1109029 Burkholderia phytofirmans PsJN 6284182 YP_001894630.1 CDS Bphyt_0987 NC_010681.1 1109086 1109424 R PFAM: cytochrome C class I; KEGG: bxe:Bxe_A3635 cytochrome C, class I; cytochrome C class I complement(1109086..1109424) Burkholderia phytofirmans PsJN 6281089 YP_001894631.1 CDS Bphyt_0988 NC_010681.1 1109604 1111277 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(1109604..1111277) Burkholderia phytofirmans PsJN 6281090 YP_001894632.1 CDS Bphyt_0989 NC_010681.1 1111456 1112421 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3633 LysR family transcriptional regulator; LysR family transcriptional regulator 1111456..1112421 Burkholderia phytofirmans PsJN 6281091 YP_001894633.1 CDS Bphyt_0990 NC_010681.1 1112563 1113468 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1112563..1113468 Burkholderia phytofirmans PsJN 6281092 YP_001894634.1 CDS Bphyt_0991 NC_010681.1 1113571 1114302 R PFAM: protein of unknown function DUF541; KEGG: bxe:Bxe_A3631 hypothetical protein; hypothetical protein complement(1113571..1114302) Burkholderia phytofirmans PsJN 6281093 YP_001894635.1 CDS Bphyt_0992 NC_010681.1 1114476 1114934 R PFAM: protein of unknown function DUF55; KEGG: bcm:Bcenmc03_2463 protein of unknown function DUF55; hypothetical protein complement(1114476..1114934) Burkholderia phytofirmans PsJN 6281094 YP_001894636.1 CDS Bphyt_0993 NC_010681.1 1115369 1115683 R PFAM: protein of unknown function DUF710; KEGG: bxe:Bxe_A3505 hypothetical protein; hypothetical protein complement(1115369..1115683) Burkholderia phytofirmans PsJN 6282373 YP_001894637.1 CDS Bphyt_0994 NC_010681.1 1115680 1116036 R KEGG: bxe:Bxe_A3504 hypothetical protein; hypothetical protein complement(1115680..1116036) Burkholderia phytofirmans PsJN 6282374 YP_001894638.1 CDS Bphyt_0995 NC_010681.1 1116594 1118483 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_A3502 outer membrane cobalamin receptor, TonB dependent; TonB-dependent receptor 1116594..1118483 Burkholderia phytofirmans PsJN 6282375 YP_001894639.1 CDS Bphyt_0996 NC_010681.1 1118514 1119566 D PFAM: transporter permease; KEGG: bxe:Bxe_A3501 ABC Fe3+-hydroxamate/cobalamin transporter inner membrane subunit; transporter permease 1118514..1119566 Burkholderia phytofirmans PsJN 6282376 YP_001894640.1 CDS Bphyt_0997 NC_010681.1 1119566 1120408 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A3500 ABC Fe3+-hydroxamate/cobalamin transporter ATPase; ABC transporter 1119566..1120408 Burkholderia phytofirmans PsJN 6282270 YP_001894641.1 CDS cobT NC_010681.1 1120455 1121516 D catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1120455..1121516 Burkholderia phytofirmans PsJN 6282271 YP_001894642.1 CDS cobS NC_010681.1 1121559 1122335 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 1121559..1122335 Burkholderia phytofirmans PsJN 6282272 YP_001894643.1 CDS Bphyt_1000 NC_010681.1 1122320 1122910 D TIGRFAM: alpha-ribazole phosphatase; PFAM: phosphoglycerate mutase; KEGG: bxe:Bxe_A3497 phosphoglycerate/bisphosphoglycerate mutase; alpha-ribazole phosphatase 1122320..1122910 Burkholderia phytofirmans PsJN 6282273 YP_001894644.1 CDS Bphyt_1001 NC_010681.1 1122940 1123842 R PFAM: periplasmic binding protein; KEGG: bxe:Bxe_A3496 ABC Fe3+-hydroxamate/cobalamin transporter periplasmic ligand binding protein; periplasmic binding protein complement(1122940..1123842) Burkholderia phytofirmans PsJN 6282274 YP_001894645.1 CDS Bphyt_1002 NC_010681.1 1123905 1124966 R cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase complement(1123905..1124966) Burkholderia phytofirmans PsJN 6282275 YP_001894646.1 CDS cobD NC_010681.1 1124972 1125907 R CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein complement(1124972..1125907) Burkholderia phytofirmans PsJN 6284503 YP_001894647.1 CDS Bphyt_1004 NC_010681.1 1125907 1126461 R PFAM: cobalbumin biosynthesis protein; KEGG: bxe:Bxe_A3493 cobinamide kinase/adenosyl cobinamidephosphate guanylyltransferase; adenosylcobinamide kinase complement(1125907..1126461) Burkholderia phytofirmans PsJN 6284504 YP_001894648.1 CDS Bphyt_1005 NC_010681.1 1126755 1128215 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1126755..1128215 Burkholderia phytofirmans PsJN 6284505 YP_001894649.1 CDS Bphyt_1006 NC_010681.1 1128367 1128783 D PFAM: DoxX family protein; KEGG: bam:Bamb_2492 DoxX family protein; DoxX family protein 1128367..1128783 Burkholderia phytofirmans PsJN 6284506 YP_001894650.1 CDS Bphyt_1007 NC_010681.1 1128991 1129410 R PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A3491 phenylacetic acid degradation-related protein; thioesterase superfamily protein complement(1128991..1129410) Burkholderia phytofirmans PsJN 6284507 YP_001894651.1 CDS Bphyt_1008 NC_010681.1 1129621 1130259 D PFAM: cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_A3490 ParA family ATPase; cobyrinic acid ac-diamide synthase 1129621..1130259 Burkholderia phytofirmans PsJN 6284508 YP_001894652.1 CDS Bphyt_1009 NC_010681.1 1130452 1130838 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(1130452..1130838) Burkholderia phytofirmans PsJN 6284631 YP_001894653.1 CDS panC NC_010681.1 1130873 1131706 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(1130873..1131706) Burkholderia phytofirmans PsJN 6284632 YP_001894654.1 CDS Bphyt_1011 NC_010681.1 1131909 1132784 R PFAM: chromosome segregation and condensation protein ScpA; KEGG: bxe:Bxe_A3487 hypothetical protein; chromosome segregation and condensation protein ScpA complement(1131909..1132784) Burkholderia phytofirmans PsJN 6284633 YP_001894655.1 CDS Bphyt_1012 NC_010681.1 1132789 1132974 R KEGG: bxe:Bxe_A3486 hypothetical protein; hypothetical protein complement(1132789..1132974) Burkholderia phytofirmans PsJN 6284634 YP_001894656.1 CDS Bphyt_1013 NC_010681.1 1133300 1135135 D PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bxe:Bxe_A3485 outer membrane protein; surface antigen (D15) 1133300..1135135 Burkholderia phytofirmans PsJN 6284635 YP_001894657.1 CDS Bphyt_1014 NC_010681.1 1135164 1139495 D PFAM: protein of unknown function DUF490; KEGG: bxe:Bxe_A3484 hypothetical protein; hypothetical protein 1135164..1139495 Burkholderia phytofirmans PsJN 6284636 YP_001894658.1 CDS metG NC_010681.1 1139606 1141741 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1139606..1141741) Burkholderia phytofirmans PsJN 6284579 YP_001894659.1 CDS Bphyt_1016 NC_010681.1 1142105 1142758 R PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: bxe:Bxe_A3482 outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein complement(1142105..1142758) Burkholderia phytofirmans PsJN 6284580 YP_001894660.1 CDS Bphyt_1017 NC_010681.1 1143107 1144195 D PFAM: cobyrinic acid ac-diamide synthase; protein of unknown function DUF59; KEGG: bxe:Bxe_A3481 ATP-binding protein; cobyrinic acid ac-diamide synthase 1143107..1144195 Burkholderia phytofirmans PsJN 6284581 YP_001894661.1 CDS Bphyt_1018 NC_010681.1 1144422 1144955 D PFAM: superoxide dismutase copper/zinc binding; KEGG: bxe:Bxe_A3479 copper/zinc superoxide dismutase; copper/zinc binding superoxide dismutase 1144422..1144955 Burkholderia phytofirmans PsJN 6284582 YP_001894662.1 CDS dcd NC_010681.1 1145305 1145874 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1145305..1145874 Burkholderia phytofirmans PsJN 6284583 YP_001894663.1 CDS Bphyt_1020 NC_010681.1 1145961 1148246 D PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: bxe:Bxe_A3477 ornithine decarboxylase; lysine decarboxylase 1145961..1148246 Burkholderia phytofirmans PsJN 6284584 YP_001894664.1 CDS Bphyt_1021 NC_010681.1 1148246 1148992 D KEGG: bxe:Bxe_A3476 hypothetical protein; hypothetical protein 1148246..1148992 Burkholderia phytofirmans PsJN 6284345 YP_001894665.1 CDS Bphyt_1022 NC_010681.1 1149032 1149958 R PFAM: protein of unknown function UPF0187; KEGG: bxe:Bxe_A3475 hypothetical protein; hypothetical protein complement(1149032..1149958) Burkholderia phytofirmans PsJN 6284346 YP_001894666.1 CDS Bphyt_1023 NC_010681.1 1150662 1151114 D KEGG: bxe:Bxe_A3642 hypothetical protein; hypothetical protein 1150662..1151114 Burkholderia phytofirmans PsJN 6284347 YP_001894667.1 CDS Bphyt_1024 NC_010681.1 1151332 1153005 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bpm:BURPS1710b_A1760 type I phosphodiesterase/nucleotide pyrophosphatase family protein; type I phosphodiesterase/nucleotide pyrophosphatase complement(1151332..1153005) Burkholderia phytofirmans PsJN 6284348 YP_001894668.1 CDS Bphyt_1025 NC_010681.1 1153637 1155553 R KEGG: bxe:Bxe_A3454 glucokinase; TIGRFAM: glucokinase; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); glucokinase; glucokinase complement(1153637..1155553) Burkholderia phytofirmans PsJN 6284349 YP_001894669.1 CDS Bphyt_1026 NC_010681.1 1155531 1156235 R TIGRFAM: 6-phosphogluconolactonase; KEGG: bxe:Bxe_A3453 6-phosphogluconolactonase; 6-phosphogluconolactonase complement(1155531..1156235) Burkholderia phytofirmans PsJN 6284350 YP_001894670.1 CDS Bphyt_1027 NC_010681.1 1156416 1157879 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(1156416..1157879) Burkholderia phytofirmans PsJN 6284129 YP_001894671.1 CDS Bphyt_1028 NC_010681.1 1158425 1159672 D PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A3451 ABC sugar (maltose) transporter periplasmic ligand binding protein; family 1 extracellular solute-binding protein 1158425..1159672 Burkholderia phytofirmans PsJN 6284130 YP_001894672.1 CDS Bphyt_1029 NC_010681.1 1159872 1160810 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A3450 ABC sugar transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1159872..1160810 Burkholderia phytofirmans PsJN 6284131 YP_001894673.1 CDS Bphyt_1030 NC_010681.1 1160800 1161657 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A3449 ABC sugar transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1160800..1161657 Burkholderia phytofirmans PsJN 6284132 YP_001894674.1 CDS Bphyt_1031 NC_010681.1 1161758 1162873 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: bxe:Bxe_A3448 ABC sugar transporter ATPase; ABC transporter 1161758..1162873 Burkholderia phytofirmans PsJN 6284133 YP_001894675.1 CDS Bphyt_1032 NC_010681.1 1162955 1163872 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3447 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1162955..1163872) Burkholderia phytofirmans PsJN 6284134 YP_001894676.1 CDS Bphyt_1033 NC_010681.1 1164011 1164670 R PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A3446 glutathione S-transferase; glutathione S-transferase complement(1164011..1164670) Burkholderia phytofirmans PsJN 6283497 YP_001894677.1 CDS Bphyt_1034 NC_010681.1 1164949 1166457 D PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: bxe:Bxe_A0102 FliD; flagellar hook-associated protein; flagellar hook-associated 2 domain-containing protein 1164949..1166457 Burkholderia phytofirmans PsJN 6283498 YP_001894678.1 CDS Bphyt_1035 NC_010681.1 1166524 1167147 R PFAM: protein of unknown function UPF0126; KEGG: bxe:Bxe_A3444 hypothetical protein; hypothetical protein complement(1166524..1167147) Burkholderia phytofirmans PsJN 6283499 YP_001894679.1 CDS Bphyt_1036 NC_010681.1 1167158 1168057 R PFAM: Smr protein/MutS2; KEGG: bxe:Bxe_A3443 hypothetical protein; Smr protein/MutS2 complement(1167158..1168057) Burkholderia phytofirmans PsJN 6283500 YP_001894680.1 CDS Bphyt_1037 NC_010681.1 1168097 1169098 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_A3442 thioredoxin reductase; thioredoxin reductase complement(1168097..1169098) Burkholderia phytofirmans PsJN 6283501 YP_001894681.1 CDS Bphyt_1038 NC_010681.1 1169443 1171755 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: bxe:Bxe_A3441 cell division protein; cell division protein FtsK 1169443..1171755 Burkholderia phytofirmans PsJN 6283502 YP_001894682.1 CDS lolA NC_010681.1 1172120 1172854 D participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 1172120..1172854 Burkholderia phytofirmans PsJN 6282803 YP_001894683.1 CDS Bphyt_1040 NC_010681.1 1172935 1173855 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3439 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1172935..1173855) Burkholderia phytofirmans PsJN 6282804 YP_001894684.1 CDS Bphyt_1041 NC_010681.1 1174027 1175016 D TIGRFAM: agmatinase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: bxe:Bxe_A3438 agmatinase; agmatinase 1174027..1175016 Burkholderia phytofirmans PsJN 6282805 YP_001894685.1 CDS Bphyt_1042 NC_010681.1 1175099 1176415 R TIGRFAM: hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bxe:Bxe_A3437 nucleobase/cation symporter, (NCS1) family; hydroxymethylpyrimidine transporter CytX complement(1175099..1176415) Burkholderia phytofirmans PsJN 6282806 YP_001894686.1 CDS Bphyt_1043 NC_010681.1 1176771 1178084 D PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: bxe:Bxe_A3436 recombination factor protein RarA; recombination factor protein RarA 1176771..1178084 Burkholderia phytofirmans PsJN 6282807 YP_001894687.1 CDS Bphyt_1044 NC_010681.1 1178342 1179637 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1178342..1179637 Burkholderia phytofirmans PsJN 6282808 YP_001894688.1 CDS Bphyt_1045 NC_010681.1 1180155 1181456 D PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_A3433 dehydrogenase; FAD dependent oxidoreductase 1180155..1181456 Burkholderia phytofirmans PsJN 6282793 YP_001894689.1 CDS Bphyt_1046 NC_010681.1 1181453 1182304 D PFAM: protein of unknown function DUF1365; KEGG: bxe:Bxe_A3432 hypothetical protein; hypothetical protein 1181453..1182304 Burkholderia phytofirmans PsJN 6282794 YP_001894690.1 CDS Bphyt_1047 NC_010681.1 1182317 1183528 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase type 11; methyltransferase type 12; KEGG: bxe:Bxe_A3431 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 1182317..1183528 Burkholderia phytofirmans PsJN 6282795 YP_001894691.1 CDS Bphyt_1048 NC_010681.1 1183494 1184042 D KEGG: bxe:Bxe_A3430 hypothetical protein; hypothetical protein 1183494..1184042 Burkholderia phytofirmans PsJN 6282796 YP_001894692.1 CDS Bphyt_1049 NC_010681.1 1184157 1185239 R PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: bmu:Bmul_5847 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase complement(1184157..1185239) Burkholderia phytofirmans PsJN 6282491 YP_001894693.1 CDS Bphyt_1050 NC_010681.1 1185329 1186654 R TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bur:Bcep18194_C6575 manganese/iron transporter NRAMP family; NRAMP family Mn2+/Fe2+ transporter complement(1185329..1186654) Burkholderia phytofirmans PsJN 6282492 YP_001894694.1 CDS Bphyt_1051 NC_010681.1 1186779 1187759 R KEGG: bxe:Bxe_A3428 hypothetical protein; hypothetical protein complement(1186779..1187759) Burkholderia phytofirmans PsJN 6282493 YP_001894695.1 CDS Bphyt_1052 NC_010681.1 1188161 1188946 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: bxe:Bxe_A3427 peptidase M24A, methionine aminopeptidase, subfamily 1; methionine aminopeptidase 1188161..1188946 Burkholderia phytofirmans PsJN 6282494 YP_001894696.1 CDS Bphyt_1053 NC_010681.1 1189146 1189679 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A3426 acetyltransferase; N-acetyltransferase GCN5 1189146..1189679 Burkholderia phytofirmans PsJN 6282495 YP_001894697.1 CDS Bphyt_1054 NC_010681.1 1189902 1190756 D blocks the formation of polar Z-ring septums; septum formation inhibitor 1189902..1190756 Burkholderia phytofirmans PsJN 6282496 YP_001894698.1 CDS Bphyt_1055 NC_010681.1 1190860 1191675 D TIGRFAM: septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_A3424 septum site-determining protein MinD; septum site-determining protein MinD 1190860..1191675 Burkholderia phytofirmans PsJN 6282023 YP_001894699.1 CDS Bphyt_1056 NC_010681.1 1191690 1191944 D works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 1191690..1191944 Burkholderia phytofirmans PsJN 6282024 YP_001894700.1 CDS Bphyt_1057 NC_010681.1 1192261 1192572 D KEGG: bxe:Bxe_A3422 hypothetical protein; hypothetical protein 1192261..1192572 Burkholderia phytofirmans PsJN 6282025 YP_001894701.1 CDS Bphyt_1058 NC_010681.1 1192717 1192827 D KEGG: bmu:Bmul_2412 hypothetical protein; hypothetical protein 1192717..1192827 Burkholderia phytofirmans PsJN 6282026 YP_001894702.1 CDS Bphyt_1059 NC_010681.1 1192821 1194245 R PFAM: chloride channel core; KEGG: bmu:Bmul_2411 chloride channel core; chloride channel core complement(1192821..1194245) Burkholderia phytofirmans PsJN 6282027 YP_001894703.1 CDS Bphyt_1060 NC_010681.1 1194458 1195462 D TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: bxe:Bxe_A3421 lipopolysaccharide heptosyltransferase-1; lipopolysaccharide heptosyltransferase I 1194458..1195462 Burkholderia phytofirmans PsJN 6282028 YP_001894704.1 CDS Bphyt_1061 NC_010681.1 1196171 1196305 D hypothetical protein 1196171..1196305 Burkholderia phytofirmans PsJN 6282411 YP_001894705.1 CDS Bphyt_1062 NC_010681.1 1196359 1196538 R KEGG: bxe:Bxe_A3420 hypothetical protein; hypothetical protein complement(1196359..1196538) Burkholderia phytofirmans PsJN 6282412 YP_001894706.1 CDS Bphyt_1063 NC_010681.1 1196777 1198084 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3419 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(1196777..1198084) Burkholderia phytofirmans PsJN 6282413 YP_001894707.1 CDS Bphyt_1064 NC_010681.1 1198598 1199140 R TIGRFAM: TonB family protein; KEGG: bxe:Bxe_A3417 TonB protein; TonB family protein complement(1198598..1199140) Burkholderia phytofirmans PsJN 6282414 YP_001894708.1 CDS Bphyt_1065 NC_010681.1 1199510 1200916 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(1199510..1200916) Burkholderia phytofirmans PsJN 6282415 YP_001894709.1 CDS Bphyt_1066 NC_010681.1 1201087 1201899 R SMART: helix-turn-helix domain protein; KEGG: bxe:Bxe_A3414 XRE family transcriptional regulator; XRE family transcriptional regulator complement(1201087..1201899) Burkholderia phytofirmans PsJN 6282416 YP_001894710.1 CDS Bphyt_1067 NC_010681.1 1202054 1202806 D PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; methyltransferase type 11; methyltransferase type 12; KEGG: bxe:Bxe_A3413 methyltransferase; type 11 methyltransferase 1202054..1202806 Burkholderia phytofirmans PsJN 6281969 YP_001894711.1 CDS Bphyt_1068 NC_010681.1 1202929 1206156 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(1202929..1206156) Burkholderia phytofirmans PsJN 6281970 YP_001894712.1 CDS Bphyt_1069 NC_010681.1 1206560 1207588 D KEGG: bxe:Bxe_A3411 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase; porphobilinogen deaminase 1206560..1207588 Burkholderia phytofirmans PsJN 6281971 YP_001894713.1 CDS Bphyt_1070 NC_010681.1 1207588 1209606 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis; bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase 1207588..1209606 Burkholderia phytofirmans PsJN 6281972 YP_001894714.1 CDS Bphyt_1071 NC_010681.1 1209609 1210799 D PFAM: HemY domain protein; hypothetical protein; hypothetical protein; KEGG: bxe:Bxe_A3409 hypothetical protein; HemY domain-containing protein 1209609..1210799 Burkholderia phytofirmans PsJN 6281973 YP_001894715.1 CDS Bphyt_1072 NC_010681.1 1210951 1211418 R KEGG: bxe:Bxe_B0259 hypothetical protein; hypothetical protein complement(1210951..1211418) Burkholderia phytofirmans PsJN 6281974 YP_001894716.1 CDS Bphyt_1073 NC_010681.1 1211994 1212647 R KEGG: ana:alr3407 similar to abortive phage resistance protein; abortive phage resistance protein-like protein complement(1211994..1212647) Burkholderia phytofirmans PsJN 6281667 YP_001894717.1 CDS Bphyt_1074 NC_010681.1 1212647 1214017 R KEGG: ana:alr3406 similar to abortive phage resistance protein; abortive phage resistance protein-like protein complement(1212647..1214017) Burkholderia phytofirmans PsJN 6281668 YP_001894718.1 CDS Bphyt_1075 NC_010681.1 1215139 1215414 R hypothetical protein complement(1215139..1215414) Burkholderia phytofirmans PsJN 6281669 YP_001894719.1 CDS Bphyt_1076 NC_010681.1 1215574 1216359 R hypothetical protein complement(1215574..1216359) Burkholderia phytofirmans PsJN 6281670 YP_001894720.1 CDS Bphyt_1077 NC_010681.1 1216626 1217501 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bxe:Bxe_C0822 phage integrase; integrase family protein 1216626..1217501 Burkholderia phytofirmans PsJN 6281671 YP_001894721.1 CDS Bphyt_1078 NC_010681.1 1217523 1218692 D PFAM: transposase; KEGG: bxe:Bxe_C0821 transposase; transposase 1217523..1218692 Burkholderia phytofirmans PsJN 6281672 YP_001894722.1 CDS Bphyt_1079 NC_010681.1 1220387 1220890 D PFAM: protein of unknown function DUF1311; KEGG: bxe:Bxe_B2403 hypothetical protein; hypothetical protein 1220387..1220890 Burkholderia phytofirmans PsJN 6281140 YP_001894723.1 CDS Bphyt_1081 NC_010681.1 1221317 1221715 R KEGG: bcm:Bcenmc03_6808 hypothetical protein; hypothetical protein complement(1221317..1221715) Burkholderia phytofirmans PsJN 6281142 YP_001894724.1 CDS Bphyt_1082 NC_010681.1 1221796 1222737 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcm:Bcenmc03_6807 transcriptional regulator, LysR family; LysR family transcriptional regulator 1221796..1222737 Burkholderia phytofirmans PsJN 6281143 YP_001894725.1 CDS Bphyt_1083 NC_010681.1 1222981 1223898 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_C1390 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1222981..1223898) Burkholderia phytofirmans PsJN 6281144 YP_001894726.1 CDS Bphyt_1084 NC_010681.1 1224016 1225179 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B2696 hydrolase; alpha/beta fold family hydrolase 1224016..1225179 Burkholderia phytofirmans PsJN 6281145 YP_001894727.1 CDS Bphyt_1085 NC_010681.1 1225228 1226019 D PFAM: beta-lactamase; KEGG: mhu:Mhun_0673 beta-lactamase-like; beta-lactamase 1225228..1226019 Burkholderia phytofirmans PsJN 6281951 YP_001894728.1 CDS Bphyt_1087 NC_010681.1 1227388 1228029 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: scl:sce2243 hypothetical protein; metal dependent phosphohydrolase complement(1227388..1228029) Burkholderia phytofirmans PsJN 6281953 YP_001894729.1 CDS Bphyt_1088 NC_010681.1 1228155 1229153 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mmr:Mmar10_1581 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1228155..1229153) Burkholderia phytofirmans PsJN 6281954 YP_001894730.1 CDS Bphyt_1089 NC_010681.1 1229465 1230088 D KEGG: scl:sce2243 hypothetical protein; hypothetical protein 1229465..1230088 Burkholderia phytofirmans PsJN 6281955 YP_001894731.1 CDS Bphyt_1090 NC_010681.1 1230237 1230833 D PFAM: carbonic anhydrase; KEGG: amr:AM1_B0037 hypothetical protein; carbonic anhydrase 1230237..1230833 Burkholderia phytofirmans PsJN 6281956 YP_001894732.1 CDS Bphyt_1091 NC_010681.1 1230990 1231880 R hypothetical protein complement(1230990..1231880) Burkholderia phytofirmans PsJN 6283696 YP_001894733.1 CDS Bphyt_1092 NC_010681.1 1232099 1232803 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: bmn:BMA10247_2143 transcriptional regulator; Crp/Fnr family transcriptional regulator 1232099..1232803 Burkholderia phytofirmans PsJN 6283697 YP_001894734.1 CDS Bphyt_1093 NC_010681.1 1233097 1234416 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3403 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(1233097..1234416) Burkholderia phytofirmans PsJN 6283698 YP_001894735.1 CDS fabG NC_010681.1 1234572 1235330 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(1234572..1235330) Burkholderia phytofirmans PsJN 6283699 YP_001894736.1 CDS Bphyt_1095 NC_010681.1 1235374 1236813 R PFAM: aldehyde dehydrogenase_; KEGG: bxe:Bxe_A3401 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase complement(1235374..1236813) Burkholderia phytofirmans PsJN 6283700 YP_001894737.1 CDS Bphyt_1096 NC_010681.1 1237067 1237594 D catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 1237067..1237594 Burkholderia phytofirmans PsJN 6283701 YP_001894738.1 CDS Bphyt_1097 NC_010681.1 1237747 1238085 R PFAM: helix-turn-helix HxlR type; KEGG: csa:Csal_2370 transcriptional regulator; HxlR family transcriptional regulator complement(1237747..1238085) Burkholderia phytofirmans PsJN 6281737 YP_001894739.1 CDS Bphyt_1098 NC_010681.1 1238177 1238926 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfo:Pfl_2439 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1238177..1238926 Burkholderia phytofirmans PsJN 6281738 YP_001894740.1 CDS Bphyt_1099 NC_010681.1 1239118 1239603 R KEGG: bvi:Bcep1808_5919 hypothetical protein; hypothetical protein complement(1239118..1239603) Burkholderia phytofirmans PsJN 6281739 YP_001894741.1 CDS Bphyt_1100 NC_010681.1 1239752 1240399 R PFAM: isochorismatase hydrolase; KEGG: nca:Noca_2078 isochorismatase hydrolase; isochorismatase hydrolase complement(1239752..1240399) Burkholderia phytofirmans PsJN 6281740 YP_001894742.1 CDS Bphyt_1102 NC_010681.1 1240963 1241418 D KEGG: bja:blr7069 hypothetical protein; hypothetical protein 1240963..1241418 Burkholderia phytofirmans PsJN 6281742 YP_001894743.1 CDS Bphyt_1103 NC_010681.1 1241452 1241955 R PFAM: GCN5-related N-acetyltransferase; KEGG: det:DET1118 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(1241452..1241955) Burkholderia phytofirmans PsJN 6281743 YP_001894744.1 CDS Bphyt_1104 NC_010681.1 1242100 1243104 R PFAM: beta-lactamase; KEGG: hne:HNE_1492 metallo-beta-lactamase family protein; beta-lactamase complement(1242100..1243104) Burkholderia phytofirmans PsJN 6280978 YP_001894745.1 CDS Bphyt_1105 NC_010681.1 1243532 1244005 D PFAM: protein of unknown function DUF1348; KEGG: bmn:BMA10247_A0012 hypothetical protein; hypothetical protein 1243532..1244005 Burkholderia phytofirmans PsJN 6280979 YP_001894746.1 CDS Bphyt_1106 NC_010681.1 1244053 1244664 D PFAM: glutathione S-transferase; KEGG: bxe:Bxe_B0925 glutathione S-transferase; glutathione S-transferase 1244053..1244664 Burkholderia phytofirmans PsJN 6280980 YP_001894747.1 CDS Bphyt_1107 NC_010681.1 1244919 1247021 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bch:Bcen2424_3671 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1244919..1247021 Burkholderia phytofirmans PsJN 6280981 YP_001894748.1 CDS Bphyt_1108 NC_010681.1 1247214 1248629 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: smd:Smed_1974 GntR family transcriptional regulator; GntR family transcriptional regulator complement(1247214..1248629) Burkholderia phytofirmans PsJN 6280982 YP_001894749.1 CDS Bphyt_1109 NC_010681.1 1249047 1250210 D PFAM: extracellular ligand-binding receptor; KEGG: cko:CKO_02937 hypothetical protein; extracellular ligand-binding receptor 1249047..1250210 Burkholderia phytofirmans PsJN 6280983 YP_001894750.1 CDS ectC NC_010681.1 1250381 1250794 D N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid; L-ectoine synthase 1250381..1250794 Burkholderia phytofirmans PsJN 6280984 YP_001894751.1 CDS Bphyt_1111 NC_010681.1 1251136 1252074 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bvi:Bcep1808_3764 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 1251136..1252074 Burkholderia phytofirmans PsJN 6281058 YP_001894752.1 CDS Bphyt_1112 NC_010681.1 1252377 1253267 D PFAM: AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A2690 AraC family transcriptional regulator; AraC family transcriptional regulator 1252377..1253267 Burkholderia phytofirmans PsJN 6281059 YP_001894753.1 CDS Bphyt_1113 NC_010681.1 1253364 1254338 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B1809 non-heme chloroperoxidase; chloride peroxidase complement(1253364..1254338) Burkholderia phytofirmans PsJN 6281060 YP_001894754.1 CDS Bphyt_1114 NC_010681.1 1254765 1256864 D PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: bxe:Bxe_A3399 hypothetical protein; hypothetical protein 1254765..1256864 Burkholderia phytofirmans PsJN 6281061 YP_001894755.1 CDS Bphyt_1115 NC_010681.1 1256906 1257235 R PFAM: excinuclease ABC C subunit domain protein; KEGG: bxe:Bxe_A3398 hypothetical protein; excinuclease ABC C subunit domain-containing protein complement(1256906..1257235) Burkholderia phytofirmans PsJN 6281062 YP_001894756.1 CDS Bphyt_1116 NC_010681.1 1257245 1258414 R PFAM: protein of unknown function DUF482; KEGG: bxe:Bxe_A3397 hypothetical protein; hypothetical protein complement(1257245..1258414) Burkholderia phytofirmans PsJN 6281063 YP_001894757.1 CDS Bphyt_1117 NC_010681.1 1258558 1260258 D NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD+ synthetase 1258558..1260258 Burkholderia phytofirmans PsJN 6281064 YP_001894758.1 CDS Bphyt_1118 NC_010681.1 1260385 1260723 D PFAM: nitrogen regulatory protein P-II; KEGG: bxe:Bxe_A3395 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 1260385..1260723 Burkholderia phytofirmans PsJN 6282631 YP_001894759.1 CDS Bphyt_1119 NC_010681.1 1260981 1262132 R KEGG: bxe:Bxe_A3394 outer membrane porin, OmpC family; outer membrane porin, OmpC family complement(1260981..1262132) Burkholderia phytofirmans PsJN 6282632 YP_001894760.1 CDS Bphyt_1120 NC_010681.1 1262723 1263502 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A3393 ABC basic amino acid transporter ATPase; ABC transporter complement(1262723..1263502) Burkholderia phytofirmans PsJN 6282633 YP_001894761.1 CDS Bphyt_1121 NC_010681.1 1263549 1264262 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A3392 ABC basic amino acid transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(1263549..1264262) Burkholderia phytofirmans PsJN 6282634 YP_001894762.1 CDS Bphyt_1122 NC_010681.1 1264259 1264948 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A3391 ABC basic amino acid transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(1264259..1264948) Burkholderia phytofirmans PsJN 6282635 YP_001894763.1 CDS Bphyt_1123 NC_010681.1 1265645 1266355 D PFAM: pirin; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_A3389 hypothetical protein; pirin 1265645..1266355 Burkholderia phytofirmans PsJN 6282636 YP_001894764.1 CDS Bphyt_1124 NC_010681.1 1266556 1267086 R KEGG: bxe:Bxe_A3388 hypothetical protein; hypothetical protein complement(1266556..1267086) Burkholderia phytofirmans PsJN 6282637 YP_001894765.1 CDS Bphyt_1125 NC_010681.1 1267307 1268032 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A3387 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 1267307..1268032 Burkholderia phytofirmans PsJN 6282778 YP_001894766.1 CDS Bphyt_1126 NC_010681.1 1268016 1269335 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A3386 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1268016..1269335 Burkholderia phytofirmans PsJN 6282779 YP_001894767.1 CDS Bphyt_1127 NC_010681.1 1269427 1269693 R KEGG: bxe:Bxe_A3385 hypothetical protein; hypothetical protein complement(1269427..1269693) Burkholderia phytofirmans PsJN 6282780 YP_001894768.1 CDS Bphyt_1128 NC_010681.1 1269905 1271596 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_A3384 diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(1269905..1271596) Burkholderia phytofirmans PsJN 6282781 YP_001894769.1 CDS Bphyt_1129 NC_010681.1 1272305 1274056 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A3383 ABC nitrate/sulfonate/bicarbonate family transporter fused inner membrane subunits; binding-protein-dependent transport system inner membrane protein 1272305..1274056 Burkholderia phytofirmans PsJN 6282782 YP_001894770.1 CDS Bphyt_1130 NC_010681.1 1274077 1275423 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A3382 ABC nitrate/sulfonate/bicarbonate family transporter ATPase subunit; ABC transporter 1274077..1275423 Burkholderia phytofirmans PsJN 6282783 YP_001894771.1 CDS Bphyt_1131 NC_010681.1 1275523 1276092 R KEGG: bxe:Bxe_A3381 hypothetical protein; hypothetical protein complement(1275523..1276092) Burkholderia phytofirmans PsJN 6282784 YP_001894772.1 CDS Bphyt_1132 NC_010681.1 1276089 1276667 R KEGG: bxe:Bxe_A3380 hypothetical protein; hypothetical protein complement(1276089..1276667) Burkholderia phytofirmans PsJN 6283839 YP_001894773.1 CDS Bphyt_1133 NC_010681.1 1277030 1278088 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: bxe:Bxe_A3379 sigma54 specific Fis family transcriptional regulator; Fis family transcriptional regulator complement(1277030..1278088) Burkholderia phytofirmans PsJN 6283840 YP_001894774.1 CDS Bphyt_1134 NC_010681.1 1278461 1278778 D PFAM: protein of unknown function DUF883 ElaB; KEGG: bxe:Bxe_A3378 hypothetical protein; hypothetical protein 1278461..1278778 Burkholderia phytofirmans PsJN 6283841 YP_001894775.1 CDS Bphyt_1135 NC_010681.1 1278825 1279100 D KEGG: bxe:Bxe_A3377 hypothetical protein; hypothetical protein 1278825..1279100 Burkholderia phytofirmans PsJN 6283842 YP_001894776.1 CDS Bphyt_1136 NC_010681.1 1279406 1280806 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: bxe:Bxe_A3376 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, fis family; Fis family transcriptional regulator 1279406..1280806 Burkholderia phytofirmans PsJN 6283843 YP_001894777.1 CDS Bphyt_1137 NC_010681.1 1280910 1281179 D KEGG: bxe:Bxe_A3375 hypothetical protein; hypothetical protein 1280910..1281179 Burkholderia phytofirmans PsJN 6283844 YP_001894778.1 CDS Bphyt_1138 NC_010681.1 1281337 1281549 D KEGG: bur:Bcep18194_A5720 hypothetical protein; hypothetical protein 1281337..1281549 Burkholderia phytofirmans PsJN 6283845 YP_001894779.1 CDS Bphyt_1139 NC_010681.1 1281762 1283198 D TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20; KEGG: bxe:Bxe_A3374 alpha,alpha-trehalose-phosphate synthase(UDP-forming); alpha,alpha-trehalose-phosphate synthase 1281762..1283198 Burkholderia phytofirmans PsJN 6282948 YP_001894780.1 CDS Bphyt_1140 NC_010681.1 1283354 1284811 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3373 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein complement(1283354..1284811) Burkholderia phytofirmans PsJN 6282949 YP_001894781.1 CDS Bphyt_1141 NC_010681.1 1284920 1285423 R PFAM: PEBP family protein; KEGG: bxe:Bxe_A3372 conserved hypothetical protein 481; PEBP family protein complement(1284920..1285423) Burkholderia phytofirmans PsJN 6282950 YP_001894782.1 CDS Bphyt_1142 NC_010681.1 1285586 1286032 R TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: bxe:Bxe_A3371 DNA mismatch endonuclease; DNA mismatch endonuclease Vsr complement(1285586..1286032) Burkholderia phytofirmans PsJN 6282951 YP_001894783.1 CDS Bphyt_1143 NC_010681.1 1286090 1287370 R KEGG: bxe:Bxe_A3354 C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(1286090..1287370) Burkholderia phytofirmans PsJN 6282952 YP_001894784.1 CDS Bphyt_1144 NC_010681.1 1287655 1287981 R KEGG: bxe:Bxe_A3353 hypothetical protein; hypothetical protein complement(1287655..1287981) Burkholderia phytofirmans PsJN 6282953 YP_001894785.1 CDS Bphyt_1145 NC_010681.1 1288158 1288349 D PFAM: CsbD family protein; KEGG: bxe:Bxe_A3352 hypothetical protein; CsbD family protein 1288158..1288349 Burkholderia phytofirmans PsJN 6282954 YP_001894786.1 CDS Bphyt_1146 NC_010681.1 1288491 1288763 D KEGG: bxe:Bxe_A3351 hypothetical protein; hypothetical protein 1288491..1288763 Burkholderia phytofirmans PsJN 6283471 YP_001894787.1 CDS Bphyt_1147 NC_010681.1 1288989 1289696 D PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A3350 glutathione S-transferase; glutathione S-transferase 1288989..1289696 Burkholderia phytofirmans PsJN 6283472 YP_001894788.1 CDS Bphyt_1148 NC_010681.1 1290158 1291231 D KEGG: bxe:Bxe_A3349 hypothetical protein; hypothetical protein 1290158..1291231 Burkholderia phytofirmans PsJN 6283473 YP_001894789.1 CDS Bphyt_1149 NC_010681.1 1291389 1291607 D hypothetical protein 1291389..1291607 Burkholderia phytofirmans PsJN 6283474 YP_001894790.1 CDS Bphyt_1150 NC_010681.1 1291932 1292246 D hypothetical protein 1291932..1292246 Burkholderia phytofirmans PsJN 6283475 YP_001894791.1 CDS Bphyt_1151 NC_010681.1 1292433 1293179 D PFAM: protein of unknown function DUF1275; KEGG: bmu:Bmul_5857 protein of unknown function DUF1275; hypothetical protein 1292433..1293179 Burkholderia phytofirmans PsJN 6283476 YP_001894792.1 CDS Bphyt_1152 NC_010681.1 1293672 1294769 D PFAM: integrase family protein; KEGG: eba:ebA29 phage integrase; integrase family protein 1293672..1294769 Burkholderia phytofirmans PsJN 6283465 YP_001894793.1 CDS Bphyt_1153 NC_010681.1 1294874 1296013 D KEGG: ecm:EcSMS35_4320 hypothetical protein; hypothetical protein 1294874..1296013 Burkholderia phytofirmans PsJN 6283466 YP_001894794.1 CDS Bphyt_1154 NC_010681.1 1296003 1297013 D KEGG: ecm:EcSMS35_4318 hypothetical protein; hypothetical protein 1296003..1297013 Burkholderia phytofirmans PsJN 6283467 YP_001894795.1 CDS Bphyt_1155 NC_010681.1 1297067 1298020 R KEGG: ecm:EcSMS35_4319 DNA-cytosine methyltransferase family protein; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(1297067..1298020) Burkholderia phytofirmans PsJN 6283468 YP_001894796.1 CDS Bphyt_1156 NC_010681.1 1298073 1298306 R hypothetical protein complement(1298073..1298306) Burkholderia phytofirmans PsJN 6283469 YP_001894797.1 CDS Bphyt_1157 NC_010681.1 1298315 1298767 R hypothetical protein complement(1298315..1298767) Burkholderia phytofirmans PsJN 6283470 YP_001894798.1 CDS Bphyt_1158 NC_010681.1 1298764 1300134 R KEGG: bam:Bamb_1885 hypothetical protein; hypothetical protein complement(1298764..1300134) Burkholderia phytofirmans PsJN 6283301 YP_001894799.1 CDS Bphyt_1159 NC_010681.1 1300127 1300441 R hypothetical protein complement(1300127..1300441) Burkholderia phytofirmans PsJN 6283302 YP_001894800.1 CDS Bphyt_1160 NC_010681.1 1300431 1300676 R hypothetical protein complement(1300431..1300676) Burkholderia phytofirmans PsJN 6283303 YP_001894801.1 CDS Bphyt_1161 NC_010681.1 1300673 1301020 R KEGG: bam:Bamb_1884 hypothetical protein; hypothetical protein complement(1300673..1301020) Burkholderia phytofirmans PsJN 6283304 YP_001894802.1 CDS Bphyt_1162 NC_010681.1 1301238 1301435 R hypothetical protein complement(1301238..1301435) Burkholderia phytofirmans PsJN 6283305 YP_001894803.1 CDS Bphyt_1163 NC_010681.1 1301665 1302054 R PFAM: helix-turn-helix domain protein; KEGG: ecv:APECO1_4183 phage repressor protein; XRE family transcriptional regulator complement(1301665..1302054) Burkholderia phytofirmans PsJN 6283306 YP_001894804.1 CDS Bphyt_1164 NC_010681.1 1302733 1303248 D KEGG: bam:Bamb_1882 hypothetical protein; hypothetical protein 1302733..1303248 Burkholderia phytofirmans PsJN 6283307 YP_001894805.1 CDS Bphyt_1165 NC_010681.1 1303263 1303625 D KEGG: bam:Bamb_1881 hypothetical protein; hypothetical protein 1303263..1303625 Burkholderia phytofirmans PsJN 6281906 YP_001894806.1 CDS Bphyt_1166 NC_010681.1 1303788 1306478 D PFAM: virulence-associated E family protein; KEGG: bam:Bamb_1880 virulence-associated E family protein; virulence-associated E family protein 1303788..1306478 Burkholderia phytofirmans PsJN 6281907 YP_001894807.1 CDS Bphyt_1167 NC_010681.1 1306717 1307499 D KEGG: bam:Bamb_1879 hypothetical protein; hypothetical protein 1306717..1307499 Burkholderia phytofirmans PsJN 6281908 YP_001894808.1 CDS Bphyt_1168 NC_010681.1 1307719 1308474 D KEGG: xfa:XF0515 hypothetical protein; hypothetical protein 1307719..1308474 Burkholderia phytofirmans PsJN 6281909 YP_001894809.1 CDS Bphyt_1169 NC_010681.1 1308668 1309315 D KEGG: mgm:Mmc1_2754 hypothetical protein; hypothetical protein 1308668..1309315 Burkholderia phytofirmans PsJN 6281910 YP_001894810.1 CDS Bphyt_1170 NC_010681.1 1309263 1311317 D PFAM: terminase GpA; KEGG: syf:Synpcc7942_0731 phage terminase large subunit; terminase GpA 1309263..1311317 Burkholderia phytofirmans PsJN 6281911 YP_001894811.1 CDS Bphyt_1171 NC_010681.1 1311320 1311523 D KEGG: ppu:PP_3043 hypothetical protein; hypothetical protein 1311320..1311523 Burkholderia phytofirmans PsJN 6281912 YP_001894812.1 CDS Bphyt_1172 NC_010681.1 1311525 1312994 D TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: syf:Synpcc7942_0733 phage portal protein, lambda; phage portal protein, lambda family 1311525..1312994 Burkholderia phytofirmans PsJN 6284370 YP_001894813.1 CDS Bphyt_1173 NC_010681.1 1313089 1315152 D PFAM: peptidase U35 phage prohead HK97; KEGG: dac:Daci_4683 peptidase U35 phage prohead HK97; peptidase U35 phage prohead HK97 1313089..1315152 Burkholderia phytofirmans PsJN 6284371 YP_001894814.1 CDS Bphyt_1174 NC_010681.1 1315234 1315563 D KEGG: nha:Nham_3336 hypothetical protein; hypothetical protein 1315234..1315563 Burkholderia phytofirmans PsJN 6284372 YP_001894815.1 CDS Bphyt_1175 NC_010681.1 1315560 1315871 D KEGG: hch:HCH_05664 hypothetical protein; hypothetical protein 1315560..1315871 Burkholderia phytofirmans PsJN 6284373 YP_001894816.1 CDS Bphyt_1176 NC_010681.1 1315868 1316299 D hypothetical protein 1315868..1316299 Burkholderia phytofirmans PsJN 6284374 YP_001894817.1 CDS Bphyt_1177 NC_010681.1 1316362 1317291 D KEGG: dac:Daci_1328 hypothetical protein; hypothetical protein 1316362..1317291 Burkholderia phytofirmans PsJN 6284375 YP_001894818.1 CDS Bphyt_1178 NC_010681.1 1317371 1317700 D hypothetical protein 1317371..1317700 Burkholderia phytofirmans PsJN 6284376 YP_001894819.1 CDS Bphyt_1179 NC_010681.1 1317772 1318089 D PFAM: protein of unknown function DUF1799 phage-related; KEGG: mfa:Mfla_2690 hypothetical protein; hypothetical protein 1317772..1318089 Burkholderia phytofirmans PsJN 6283826 YP_001894820.1 CDS Bphyt_1180 NC_010681.1 1318123 1323246 D PFAM: Prophage tail length tape measure; KEGG: aav:Aave_1628 prophage tail length tape measure; prophage tail length tape measure 1318123..1323246 Burkholderia phytofirmans PsJN 6283827 YP_001894821.1 CDS Bphyt_1181 NC_010681.1 1323243 1324721 D hypothetical protein 1323243..1324721 Burkholderia phytofirmans PsJN 6283828 YP_001894822.1 CDS Bphyt_1182 NC_010681.1 1324721 1325635 D hypothetical protein 1324721..1325635 Burkholderia phytofirmans PsJN 6283829 YP_001894823.1 CDS Bphyt_1183 NC_010681.1 1325632 1327530 D KEGG: bcm:Bcenmc03_2384 hypothetical protein; hypothetical protein 1325632..1327530 Burkholderia phytofirmans PsJN 6283830 YP_001894824.1 CDS Bphyt_1184 NC_010681.1 1327539 1327784 D hypothetical protein 1327539..1327784 Burkholderia phytofirmans PsJN 6283831 YP_001894825.1 CDS Bphyt_1185 NC_010681.1 1327917 1328444 D PFAM: glycoside hydrolase family 24; KEGG: bpd:BURPS668_A2335 phage-related lysozyme; glycoside hydrolase 1327917..1328444 Burkholderia phytofirmans PsJN 6283832 YP_001894826.1 CDS Bphyt_1186 NC_010681.1 1328441 1328845 D hypothetical protein 1328441..1328845 Burkholderia phytofirmans PsJN 6283187 YP_001894827.1 CDS Bphyt_1187 NC_010681.1 1328899 1329240 D KEGG: bvi:Bcep1808_7730 hypothetical protein; hypothetical protein 1328899..1329240 Burkholderia phytofirmans PsJN 6283188 YP_001894828.1 CDS Bphyt_1188 NC_010681.1 1329237 1329659 D KEGG: cre:CHLREDRAFT_192611 hypothetical protein Pfam: DUF827 Laminin_I Filament PROSITE: ALA_RICH; hypothetical protein 1329237..1329659 Burkholderia phytofirmans PsJN 6283189 YP_001894829.1 CDS Bphyt_1189 NC_010681.1 1329625 1329930 D hypothetical protein 1329625..1329930 Burkholderia phytofirmans PsJN 6283190 YP_001894830.1 CDS Bphyt_1191 NC_010681.1 1331101 1331889 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1792 transposase-related ATP-binding protein; IstB domain-containing protein ATP-binding protein complement(1331101..1331889) Burkholderia phytofirmans PsJN 6283192 YP_001894831.1 CDS Bphyt_1192 NC_010681.1 1331892 1333418 R PFAM: integrase; KEGG: bxe:Bxe_A1791 transposase catalytic subunit; integrase complement(1331892..1333418) Burkholderia phytofirmans PsJN 6283193 YP_001894832.1 CDS Bphyt_1193 NC_010681.1 1334102 1335166 D PFAM: acyltransferase 3; KEGG: xau:Xaut_1956 acyltransferase 3; acyltransferase 3 1334102..1335166 Burkholderia phytofirmans PsJN 6280839 YP_001894833.1 CDS Bphyt_1194 NC_010681.1 1335808 1336137 D hypothetical protein 1335808..1336137 Burkholderia phytofirmans PsJN 6280840 YP_001894834.1 CDS Bphyt_1195 NC_010681.1 1336278 1336565 D hypothetical protein 1336278..1336565 Burkholderia phytofirmans PsJN 6280841 YP_001894835.1 CDS Bphyt_1196 NC_010681.1 1336828 1337301 R hypothetical protein complement(1336828..1337301) Burkholderia phytofirmans PsJN 6280842 YP_001894836.1 CDS Bphyt_1197 NC_010681.1 1337469 1337828 R hypothetical protein complement(1337469..1337828) Burkholderia phytofirmans PsJN 6280843 YP_001894837.1 CDS Bphyt_1198 NC_010681.1 1338923 1339615 D hypothetical protein 1338923..1339615 Burkholderia phytofirmans PsJN 6280844 YP_001894838.1 CDS Bphyt_1199 NC_010681.1 1340503 1340889 R hypothetical protein complement(1340503..1340889) Burkholderia phytofirmans PsJN 6280845 YP_001894839.1 CDS Bphyt_1200 NC_010681.1 1341378 1341566 D hypothetical protein 1341378..1341566 Burkholderia phytofirmans PsJN 6282597 YP_001894840.1 CDS Bphyt_1201 NC_010681.1 1341693 1342115 R KEGG: ecx:EcHS_A2743 lipoprotein; hypothetical protein complement(1341693..1342115) Burkholderia phytofirmans PsJN 6282598 YP_001894841.1 CDS Bphyt_1202 NC_010681.1 1342562 1342753 R PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bxe:Bxe_A3342 rubredoxin; rubredoxin-type Fe(Cys)4 protein complement(1342562..1342753) Burkholderia phytofirmans PsJN 6282599 YP_001894842.1 CDS Bphyt_1203 NC_010681.1 1343079 1343480 D KEGG: bxe:Bxe_A3341 hypothetical protein; hypothetical protein 1343079..1343480 Burkholderia phytofirmans PsJN 6282600 YP_001894843.1 CDS Bphyt_1204 NC_010681.1 1343661 1345607 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A3340 ABC transporter duplicated ATPases; ABC transporter 1343661..1345607 Burkholderia phytofirmans PsJN 6282601 YP_001894844.1 CDS Bphyt_1205 NC_010681.1 1345964 1347949 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1345964..1347949 Burkholderia phytofirmans PsJN 6282602 YP_001894845.1 CDS Bphyt_1206 NC_010681.1 1348030 1350354 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1348030..1350354 Burkholderia phytofirmans PsJN 6282603 YP_001894846.1 CDS Bphyt_1207 NC_010681.1 1350628 1351086 D KEGG: bxe:Bxe_A3337 hypothetical protein; hypothetical protein 1350628..1351086 Burkholderia phytofirmans PsJN 6281403 YP_001894847.1 CDS Bphyt_1208 NC_010681.1 1351190 1352398 R PFAM: Chromate transporter; KEGG: bxe:Bxe_A3336 chromate transporter; chromate transporter complement(1351190..1352398) Burkholderia phytofirmans PsJN 6281404 YP_001894848.1 CDS Bphyt_1209 NC_010681.1 1352564 1354918 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bxe:Bxe_A3335 diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase complement(1352564..1354918) Burkholderia phytofirmans PsJN 6281405 YP_001894849.1 CDS Bphyt_1210 NC_010681.1 1354915 1355388 R hypothetical protein complement(1354915..1355388) Burkholderia phytofirmans PsJN 6281406 YP_001894850.1 CDS Bphyt_1211 NC_010681.1 1355412 1356302 R TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bxe:Bxe_A3334 phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family protein complement(1355412..1356302) Burkholderia phytofirmans PsJN 6281407 YP_001894851.1 CDS Bphyt_1212 NC_010681.1 1356485 1356949 R PFAM: endoribonuclease L-PSP; KEGG: bxe:Bxe_A3333 hypothetical protein; endoribonuclease L-PSP complement(1356485..1356949) Burkholderia phytofirmans PsJN 6281408 YP_001894852.1 CDS Bphyt_1213 NC_010681.1 1357046 1358242 R PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_A3332 aminotransferase; GntR family transcriptional regulator complement(1357046..1358242) Burkholderia phytofirmans PsJN 6281409 YP_001894853.1 CDS Bphyt_1214 NC_010681.1 1358315 1359016 R KEGG: bxe:Bxe_A3331 hypothetical protein; hypothetical protein complement(1358315..1359016) Burkholderia phytofirmans PsJN 6284610 YP_001894854.1 CDS Bphyt_1215 NC_010681.1 1359294 1360754 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_A3330 GntR family transcriptional regulator with aminotransferase activity; GntR family transcriptional regulator 1359294..1360754 Burkholderia phytofirmans PsJN 6284611 YP_001894855.1 CDS Bphyt_1216 NC_010681.1 1360926 1362824 D molecular chaperone; heat shock protein 90 1360926..1362824 Burkholderia phytofirmans PsJN 6284612 YP_001894856.1 CDS Bphyt_1217 NC_010681.1 1362975 1363244 R KEGG: bxe:Bxe_A3328 hypothetical protein; hypothetical protein complement(1362975..1363244) Burkholderia phytofirmans PsJN 6284613 YP_001894857.1 CDS Bphyt_1218 NC_010681.1 1363518 1365326 D KEGG: bxe:Bxe_A3327 hypothetical protein; hypothetical protein 1363518..1365326 Burkholderia phytofirmans PsJN 6284614 YP_001894858.1 CDS Bphyt_1219 NC_010681.1 1365384 1367198 D PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: bxe:Bxe_A3326 TPR repeatprotein; hypothetical protein 1365384..1367198 Burkholderia phytofirmans PsJN 6284615 YP_001894859.1 CDS Bphyt_1220 NC_010681.1 1367260 1367766 R PFAM: OmpA/MotB domain protein; KEGG: aav:Aave_4592 OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(1367260..1367766) Burkholderia phytofirmans PsJN 6284616 YP_001894860.1 CDS Bphyt_1221 NC_010681.1 1368005 1368688 D PFAM: chorismate lyase; KEGG: bxe:Bxe_A3325 chorismate lyase; chorismate lyase 1368005..1368688 Burkholderia phytofirmans PsJN 6282617 YP_001894861.1 CDS Bphyt_1222 NC_010681.1 1368688 1369161 D KEGG: bxe:Bxe_A3324 hypothetical protein; hypothetical protein 1368688..1369161 Burkholderia phytofirmans PsJN 6282618 YP_001894862.1 CDS Bphyt_1223 NC_010681.1 1369158 1370090 D KEGG: bxe:Bxe_A3323 hypothetical protein; hypothetical protein 1369158..1370090 Burkholderia phytofirmans PsJN 6282619 YP_001894863.1 CDS Bphyt_1224 NC_010681.1 1370510 1370755 D KEGG: bxe:Bxe_A3322 hypothetical protein; hypothetical protein 1370510..1370755 Burkholderia phytofirmans PsJN 6282620 YP_001894864.1 CDS Bphyt_1225 NC_010681.1 1370755 1372305 D PFAM: Na+/solute symporter; KEGG: bxe:Bxe_A3321 Na+/solute symporter; Na+/solute symporter 1370755..1372305 Burkholderia phytofirmans PsJN 6282621 YP_001894865.1 CDS Bphyt_1226 NC_010681.1 1372455 1373579 D KEGG: bxe:Bxe_A3320 hypothetical protein; hypothetical protein 1372455..1373579 Burkholderia phytofirmans PsJN 6282622 YP_001894866.1 CDS Bphyt_1227 NC_010681.1 1373745 1374158 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bxe:Bxe_A3319 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase complement(1373745..1374158) Burkholderia phytofirmans PsJN 6282623 YP_001894867.1 CDS Bphyt_1228 NC_010681.1 1374635 1375588 R KEGG: bxe:Bxe_A3318 transaldolase B; TIGRFAM: transaldolase; PFAM: transaldolase; transaldolase B complement(1374635..1375588) Burkholderia phytofirmans PsJN 6283621 YP_001894868.1 CDS Bphyt_1229 NC_010681.1 1376022 1377242 R TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transporter; xanthine/uracil/vitamin C permease; KEGG: bxe:Bxe_A3317 benzoate membrane transporter; benzoate transporter complement(1376022..1377242) Burkholderia phytofirmans PsJN 6283622 YP_001894869.1 CDS Bphyt_1230 NC_010681.1 1377316 1378491 R PFAM: VWA containing CoxE family protein; KEGG: bxe:Bxe_A3316 hypothetical protein; VWA containing CoxE family protein complement(1377316..1378491) Burkholderia phytofirmans PsJN 6283623 YP_001894870.1 CDS Bphyt_1231 NC_010681.1 1378633 1379475 R PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: bxe:Bxe_A3315 ATPase, AAA family protein; ATPase AAA complement(1378633..1379475) Burkholderia phytofirmans PsJN 6283624 YP_001894871.1 CDS Bphyt_1232 NC_010681.1 1379957 1380325 D PFAM: cytochrome C class I; KEGG: bxe:Bxe_A3314 cytochrome C precursor-related protein; cytochrome C class I 1379957..1380325 Burkholderia phytofirmans PsJN 6283625 YP_001894872.1 CDS Bphyt_1233 NC_010681.1 1380385 1380768 D PFAM: cytochrome C class I; KEGG: bxe:Bxe_A3313 cytochrome C precursor-related protein; cytochrome C class I 1380385..1380768 Burkholderia phytofirmans PsJN 6283626 YP_001894873.1 CDS Bphyt_1234 NC_010681.1 1380887 1381321 R PFAM: Domain of unknown function DUF1841; KEGG: bxe:Bxe_A3312 hypothetical protein; hypothetical protein complement(1380887..1381321) Burkholderia phytofirmans PsJN 6283627 YP_001894874.1 CDS Bphyt_1235 NC_010681.1 1381482 1382126 R KEGG: bxe:Bxe_A3311 endonuclease III/Nth; TIGRFAM: endonuclease III; PFAM: hypothetical protein; HhH-GPD family protein; endonuclease III complement(1381482..1382126) Burkholderia phytofirmans PsJN 6282660 YP_001894875.1 CDS Bphyt_1236 NC_010681.1 1382146 1382985 R Involved in the electron transport chain; ferredoxin complement(1382146..1382985) Burkholderia phytofirmans PsJN 6282661 YP_001894876.1 CDS Bphyt_1237 NC_010681.1 1383222 1383854 D PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A3309 TetR family transcriptional regulator; TetR family transcriptional regulator 1383222..1383854 Burkholderia phytofirmans PsJN 6282662 YP_001894877.1 CDS Bphyt_1238 NC_010681.1 1383950 1385227 R TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bxe:Bxe_A3308 polyhydroxyalkanoate depolymerase; polyhydroxyalkanoate depolymerase complement(1383950..1385227) Burkholderia phytofirmans PsJN 6282663 YP_001894878.1 CDS Bphyt_1239 NC_010681.1 1385408 1387288 R PFAM: glycoside hydrolase 15-related; KEGG: bxe:Bxe_A3307 hypothetical protein; glycoside hydrolase 15-like protein complement(1385408..1387288) Burkholderia phytofirmans PsJN 6282664 YP_001894879.1 CDS Bphyt_1240 NC_010681.1 1387529 1387774 D KEGG: bxe:Bxe_A3306 hypothetical protein; hypothetical protein 1387529..1387774 Burkholderia phytofirmans PsJN 6282665 YP_001894880.1 CDS Bphyt_1241 NC_010681.1 1388031 1388183 R KEGG: bxe:Bxe_A3305 hypothetical protein; hypothetical protein complement(1388031..1388183) Burkholderia phytofirmans PsJN 6282666 YP_001894881.1 CDS Bphyt_1242 NC_010681.1 1388423 1389718 D KEGG: bxe:Bxe_A3304 hypothetical protein; 6-phosphogluconolactonase 1388423..1389718 Burkholderia phytofirmans PsJN 6284183 YP_001894882.1 CDS Bphyt_1243 NC_010681.1 1389925 1394382 R PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; KEGG: bxe:Bxe_A3303 cell division protein; cell division protein FtsK complement(1389925..1394382) Burkholderia phytofirmans PsJN 6284184 YP_001894883.1 CDS Bphyt_1244 NC_010681.1 1394646 1395197 R PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bxe:Bxe_A3302 hypothetical protein; hypothetical protein complement(1394646..1395197) Burkholderia phytofirmans PsJN 6284185 YP_001894884.1 CDS purT NC_010681.1 1395451 1396665 D non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 1395451..1396665 Burkholderia phytofirmans PsJN 6284186 YP_001894885.1 CDS Bphyt_1246 NC_010681.1 1396802 1397014 D KEGG: bxe:Bxe_A3300 hypothetical protein; hypothetical protein 1396802..1397014 Burkholderia phytofirmans PsJN 6284187 YP_001894886.1 CDS Bphyt_1247 NC_010681.1 1397107 1397475 D KEGG: bxe:Bxe_A3299 hypothetical protein; hypothetical protein 1397107..1397475 Burkholderia phytofirmans PsJN 6284188 YP_001894887.1 CDS Bphyt_1248 NC_010681.1 1397741 1399393 D catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase 1397741..1399393 Burkholderia phytofirmans PsJN 6284189 YP_001894888.1 CDS Bphyt_1249 NC_010681.1 1399419 1400855 D PFAM: aldehyde dehydrogenase_; KEGG: bxe:Bxe_A3297 dehydrogenase; aldehyde dehydrogenase 1399419..1400855 Burkholderia phytofirmans PsJN 6281925 YP_001894889.1 CDS Bphyt_1250 NC_010681.1 1401205 1402674 D PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_A3295 ATP-dependent RNA helicase 2; DEAD/DEAH box helicase 1401205..1402674 Burkholderia phytofirmans PsJN 6281926 YP_001894890.1 CDS Bphyt_1251 NC_010681.1 1402886 1403776 R this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase complement(1402886..1403776) Burkholderia phytofirmans PsJN 6281927 YP_001894891.1 CDS Bphyt_1252 NC_010681.1 1403808 1404671 R PFAM: rhodanese; KEGG: bxe:Bxe_A3293 hypothetical protein; rhodanese superfamily protein complement(1403808..1404671) Burkholderia phytofirmans PsJN 6281928 YP_001894892.1 CDS dnaE NC_010681.1 1405004 1408582 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1405004..1408582 Burkholderia phytofirmans PsJN 6281929 YP_001894893.1 CDS Bphyt_1254 NC_010681.1 1408619 1409380 R PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A3291 LPS biosynthesis-related protein; family 2 glycosyl transferase complement(1408619..1409380) Burkholderia phytofirmans PsJN 6281930 YP_001894894.1 CDS Bphyt_1255 NC_010681.1 1409581 1411374 D KEGG: bxe:Bxe_A3290 ABC multidrug efflux pump, fused ATPase and inner membrane subunits; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; lipid A ABC transporter ATPase/inner membrane protein MsbA 1409581..1411374 Burkholderia phytofirmans PsJN 6281931 YP_001894895.1 CDS Bphyt_1256 NC_010681.1 1411489 1412565 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3289 LPS biosynthesis-related protein; group 1 glycosyl transferase 1411489..1412565 Burkholderia phytofirmans PsJN 6282303 YP_001894896.1 CDS Bphyt_1257 NC_010681.1 1412911 1414038 D PFAM: glycosyl transferase family 9; KEGG: bxe:Bxe_A3288 lipopolysaccharide core biosynthesis glycosyltransferase protein; glycosyl transferase 1412911..1414038 Burkholderia phytofirmans PsJN 6282304 YP_001894897.1 CDS Bphyt_1258 NC_010681.1 1414038 1415384 D KEGG: bxe:Bxe_A3287 hypothetical protein; hypothetical protein 1414038..1415384 Burkholderia phytofirmans PsJN 6282305 YP_001894898.1 CDS Bphyt_1259 NC_010681.1 1415390 1416649 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3286 lipopolysaccharide biosynthesis glycosyltransferase protein; group 1 glycosyl transferase 1415390..1416649 Burkholderia phytofirmans PsJN 6282306 YP_001894899.1 CDS Bphyt_1260 NC_010681.1 1416665 1416985 R KEGG: bxe:Bxe_A3285 hypothetical protein; hypothetical protein complement(1416665..1416985) Burkholderia phytofirmans PsJN 6282307 YP_001894900.1 CDS Bphyt_1261 NC_010681.1 1417071 1417619 R PFAM: protein of unknown function DUF1486; KEGG: cvi:CV_2811 hypothetical protein; hypothetical protein complement(1417071..1417619) Burkholderia phytofirmans PsJN 6282308 YP_001894901.1 CDS rdgC NC_010681.1 1417841 1418767 D Required for efficient pilin antigenic variation; recombination associated protein 1417841..1418767 Burkholderia phytofirmans PsJN 6282309 YP_001894902.1 CDS Bphyt_1263 NC_010681.1 1419011 1420420 D KEGG: bxe:Bxe_A3282 hypothetical protein; hypothetical protein 1419011..1420420 Burkholderia phytofirmans PsJN 6281833 YP_001894903.1 CDS Bphyt_1264 NC_010681.1 1420770 1421702 D PFAM: transglutaminase; transglutaminase domain protein; KEGG: bxe:Bxe_A3281 transglutaminase-like domain protein; transglutaminase 1420770..1421702 Burkholderia phytofirmans PsJN 6281834 YP_001894904.1 CDS Bphyt_1265 NC_010681.1 1421867 1422670 D PFAM: transglutaminase; KEGG: bxe:Bxe_A3280 transglutaminase-like domain protein; transglutaminase 1421867..1422670 Burkholderia phytofirmans PsJN 6281835 YP_001894905.1 CDS Bphyt_1266 NC_010681.1 1422762 1423088 D hypothetical protein 1422762..1423088 Burkholderia phytofirmans PsJN 6281836 YP_001894906.1 CDS Bphyt_1267 NC_010681.1 1423113 1424069 R PFAM: Spore coat U domain protein; KEGG: bpd:BURPS668_1066 lipoprotein; Spore coat U domain-containing protein complement(1423113..1424069) Burkholderia phytofirmans PsJN 6281837 YP_001894907.1 CDS Bphyt_1268 NC_010681.1 1424141 1426690 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bur:Bcep18194_A4395 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein complement(1424141..1426690) Burkholderia phytofirmans PsJN 6281838 YP_001894908.1 CDS Bphyt_1269 NC_010681.1 1426859 1427590 R KEGG: bur:Bcep18194_A4396 P pilus assembly protein chaperone PapD-like; P pilus assembly protein chaperone PapD-like protein complement(1426859..1427590) Burkholderia phytofirmans PsJN 6281839 YP_001894909.1 CDS Bphyt_1270 NC_010681.1 1427608 1428132 R PFAM: Spore coat U domain protein; KEGG: bur:Bcep18194_A4397 secreted pili protein involved in motility and biofilm formation; Spore coat U domain-containing protein complement(1427608..1428132) Burkholderia phytofirmans PsJN 6281219 YP_001894910.1 CDS Bphyt_1271 NC_010681.1 1428615 1429826 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3279 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(1428615..1429826) Burkholderia phytofirmans PsJN 6281220 YP_001894911.1 CDS Bphyt_1272 NC_010681.1 1429984 1430457 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bxe:Bxe_A3278 3-demethylubiquinone-93-methyltransferase protein; 3-demethylubiquinone-9 3-methyltransferase complement(1429984..1430457) Burkholderia phytofirmans PsJN 6281221 YP_001894912.1 CDS Bphyt_1273 NC_010681.1 1430494 1430961 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bxe:Bxe_A3277 glyxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(1430494..1430961) Burkholderia phytofirmans PsJN 6281222 YP_001894913.1 CDS Bphyt_1274 NC_010681.1 1431091 1432686 R PFAM: NLP/P60 protein; KEGG: bxe:Bxe_A3276 cell wall-associated hydrolase protein; NLP/P60 protein complement(1431091..1432686) Burkholderia phytofirmans PsJN 6281223 YP_001894914.1 CDS Bphyt_1275 NC_010681.1 1432952 1433377 D PFAM: TOBE domain protein; KEGG: bxe:Bxe_A3275 molybdenum-pterin binding protein; TOBE domain-containing protein 1432952..1433377 Burkholderia phytofirmans PsJN 6281224 YP_001894915.1 CDS Bphyt_1276 NC_010681.1 1433556 1434056 D KEGG: bxe:Bxe_A3274 sensor with GAF domain; sensor with GAF domain 1433556..1434056 Burkholderia phytofirmans PsJN 6281225 YP_001894916.1 CDS Bphyt_1277 NC_010681.1 1434106 1434264 R hypothetical protein complement(1434106..1434264) Burkholderia phytofirmans PsJN 6283478 YP_001894917.1 CDS Bphyt_1278 NC_010681.1 1434680 1436377 D KEGG: bxe:Bxe_A3273 diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1434680..1436377 Burkholderia phytofirmans PsJN 6283479 YP_001894918.1 CDS Bphyt_1279 NC_010681.1 1436435 1436650 R KEGG: bxe:Bxe_A3272 hypothetical protein; hypothetical protein complement(1436435..1436650) Burkholderia phytofirmans PsJN 6283480 YP_001894919.1 CDS Bphyt_1280 NC_010681.1 1436798 1437607 D PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_A3271 small conductance mechanosensitive ion channel; mechanosensitive ion channel protein MscS 1436798..1437607 Burkholderia phytofirmans PsJN 6283481 YP_001894920.1 CDS Bphyt_1281 NC_010681.1 1437774 1438442 D PFAM: Haem oxygenase-like; KEGG: aav:Aave_2977 haem oxygenase; Haem oxygenase-like protein 1437774..1438442 Burkholderia phytofirmans PsJN 6283482 YP_001894921.1 CDS Bphyt_1282 NC_010681.1 1438463 1440109 D KEGG: ava:Ava_4783 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 1438463..1440109 Burkholderia phytofirmans PsJN 6283483 YP_001894922.1 CDS Bphyt_1283 NC_010681.1 1440185 1440646 R PFAM: response regulator receiver; KEGG: psa:PST_4183 response regulator; response regulator receiver protein complement(1440185..1440646) Burkholderia phytofirmans PsJN 6283484 YP_001894923.1 CDS Bphyt_1284 NC_010681.1 1440633 1443008 R PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: psa:PST_4182 phytochrome family protein; multi-sensor signal transduction histidine kinase complement(1440633..1443008) Burkholderia phytofirmans PsJN 6280992 YP_001894924.1 CDS Bphyt_1285 NC_010681.1 1443094 1444197 R TIGRFAM: esterase, PHB depolymerase family; KEGG: bxe:Bxe_A3270 esterase, PHB depolymerase; esterase, PHB depolymerase family complement(1443094..1444197) Burkholderia phytofirmans PsJN 6280993 YP_001894925.1 CDS Bphyt_1286 NC_010681.1 1444287 1444712 R KEGG: bxe:Bxe_A3269 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain; CopG/Arc/MetJ family transcriptional regulator complement(1444287..1444712) Burkholderia phytofirmans PsJN 6280994 YP_001894926.1 CDS Bphyt_1287 NC_010681.1 1445284 1446690 D KEGG: bxe:Bxe_B2693 regulatory protein; regulatory protein 1445284..1446690 Burkholderia phytofirmans PsJN 6280995 YP_001894927.1 CDS Bphyt_1288 NC_010681.1 1446692 1448029 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_B2692 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1446692..1448029 Burkholderia phytofirmans PsJN 6280996 YP_001894928.1 CDS Bphyt_1289 NC_010681.1 1448037 1448441 D PFAM: response regulator receiver; KEGG: bxe:Bxe_B2691 response regulator receiver domain protein(CheY); response regulator receiver protein 1448037..1448441 Burkholderia phytofirmans PsJN 6280997 YP_001894929.1 CDS Bphyt_1290 NC_010681.1 1448438 1448626 D KEGG: rme:Rmet_2950 response regulator receiver sensor signal transduction histidine kinase; CheA signal transduction histidine kinase 1448438..1448626 Burkholderia phytofirmans PsJN 6280998 YP_001894930.1 CDS Bphyt_1291 NC_010681.1 1448623 1449633 D PFAM: response regulator receiver; KEGG: bxe:Bxe_B2689 response regulator receiver domain protein(CheY); response regulator receiver protein 1448623..1449633 Burkholderia phytofirmans PsJN 6283057 YP_001894931.1 CDS Bphyt_1292 NC_010681.1 1449695 1450357 R PFAM: bifunctional deaminase-reductase domain protein; KEGG: rme:Rmet_4484 bifunctional deaminase-reductase-like protein; deaminase/reductase domain-containing protein complement(1449695..1450357) Burkholderia phytofirmans PsJN 6283058 YP_001894932.1 CDS Bphyt_1293 NC_010681.1 1450453 1451490 R PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: reu:Reut_B5466 protein of unknown function DUF1214; hypothetical protein complement(1450453..1451490) Burkholderia phytofirmans PsJN 6283059 YP_001894933.1 CDS Bphyt_1294 NC_010681.1 1451981 1453450 R TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: bxe:Bxe_A3267 ribonuclease E and G; Rne/Rng family ribonuclease complement(1451981..1453450) Burkholderia phytofirmans PsJN 6283060 YP_001894934.1 CDS Bphyt_1295 NC_010681.1 1453460 1454089 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(1453460..1454089) Burkholderia phytofirmans PsJN 6283061 YP_001894935.1 CDS Bphyt_1296 NC_010681.1 1454459 1454929 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(1454459..1454929) Burkholderia phytofirmans PsJN 6283062 YP_001894936.1 CDS Bphyt_1297 NC_010681.1 1455004 1455468 R TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: bxe:Bxe_A3263 iojap-related protein; iojap family protein complement(1455004..1455468) Burkholderia phytofirmans PsJN 6283063 YP_001894937.1 CDS Bphyt_1298 NC_010681.1 1455474 1456238 R catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP; nicotinic acid mononucleotide adenylyltransferase complement(1455474..1456238) Burkholderia phytofirmans PsJN 6282962 YP_001894938.1 CDS Bphyt_1299 NC_010681.1 1456235 1457158 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(1456235..1457158) Burkholderia phytofirmans PsJN 6282963 YP_001894939.1 CDS Bphyt_1300 NC_010681.1 1457486 1458784 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(1457486..1458784) Burkholderia phytofirmans PsJN 6282964 YP_001894940.1 CDS Bphyt_1301 NC_010681.1 1459032 1459760 R PFAM: protein of unknown function DUF28; KEGG: bxe:Bxe_A3259 hypothetical protein; hypothetical protein complement(1459032..1459760) Burkholderia phytofirmans PsJN 6282965 YP_001894941.1 CDS upp NC_010681.1 1460245 1460895 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(1460245..1460895) Burkholderia phytofirmans PsJN 6282966 YP_001894942.1 CDS Bphyt_1303 NC_010681.1 1461259 1462038 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A3257 3-oxoacyl-acyl carrier protein reductase; short-chain dehydrogenase/reductase SDR 1461259..1462038 Burkholderia phytofirmans PsJN 6282967 YP_001894943.1 CDS mgsA NC_010681.1 1462102 1462491 D catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1462102..1462491 Burkholderia phytofirmans PsJN 6282968 YP_001894944.1 CDS Bphyt_1305 NC_010681.1 1462541 1463515 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_A3255 NADPH-quinone reductase; alcohol dehydrogenase zinc-binding domain-containing protein 1462541..1463515 Burkholderia phytofirmans PsJN 6283555 YP_001894945.1 CDS Bphyt_1306 NC_010681.1 1463774 1463884 D KEGG: bxe:Bxe_A3254 hypothetical protein; hypothetical protein 1463774..1463884 Burkholderia phytofirmans PsJN 6283556 YP_001894946.1 CDS Bphyt_1307 NC_010681.1 1463884 1463976 D TIGRFAM: K+-transporting ATPase, F subunit; PFAM: K+transporting ATPase F subunit; KEGG: bxe:Bxe_A3253 hypothetical protein; K+-transporting ATPase subunit F 1463884..1463976 Burkholderia phytofirmans PsJN 6283557 YP_001894947.1 CDS Bphyt_1308 NC_010681.1 1463973 1465778 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase A 1463973..1465778 Burkholderia phytofirmans PsJN 6283558 YP_001894948.1 CDS Bphyt_1309 NC_010681.1 1465860 1467944 D One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase B 1465860..1467944 Burkholderia phytofirmans PsJN 6283559 YP_001894949.1 CDS Bphyt_1310 NC_010681.1 1467980 1468558 D One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase C 1467980..1468558 Burkholderia phytofirmans PsJN 6283560 YP_001894950.1 CDS Bphyt_1311 NC_010681.1 1468730 1471564 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: bxe:Bxe_A3249 two-component regulatory protein sensor kinase, KdpD; osmosensitive K+ channel signal transduction histidine kinase 1468730..1471564 Burkholderia phytofirmans PsJN 6283561 YP_001894951.1 CDS Bphyt_1312 NC_010681.1 1471557 1472255 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A3248 two component transcriptional regulator, winged helix family, KdpE; winged helix family two component transcriptional regulator 1471557..1472255 Burkholderia phytofirmans PsJN 6282095 YP_001894952.1 CDS Bphyt_1313 NC_010681.1 1472408 1472728 D PFAM: small multidrug resistance protein; KEGG: bxe:Bxe_A3247 small multidrug efflux pump, SugE (DMT superfamily); small multidrug resistance protein 1472408..1472728 Burkholderia phytofirmans PsJN 6282096 YP_001894953.1 CDS Bphyt_1314 NC_010681.1 1472987 1473598 D KEGG: bxe:Bxe_A3246 transmembrane protein; transmembrane protein 1472987..1473598 Burkholderia phytofirmans PsJN 6282097 YP_001894954.1 CDS Bphyt_1315 NC_010681.1 1473595 1476180 D PFAM: protein of unknown function DUF214; KEGG: bxe:Bxe_A3245 ABC lysophospholipase exporter, fused inner membrane subunits, FtsX; hypothetical protein 1473595..1476180 Burkholderia phytofirmans PsJN 6282098 YP_001894955.1 CDS Bphyt_1316 NC_010681.1 1476207 1476620 D PFAM: globin; KEGG: bxe:Bxe_A3244 oxygen-binding protein, globin-like; globin 1476207..1476620 Burkholderia phytofirmans PsJN 6282099 YP_001894956.1 CDS Bphyt_1317 NC_010681.1 1476613 1477242 D PFAM: protein of unknown function DUF924; KEGG: bxe:Bxe_A3243 transmembrane protein; hypothetical protein 1476613..1477242 Burkholderia phytofirmans PsJN 6282100 YP_001894957.1 CDS Bphyt_1318 NC_010681.1 1477407 1478153 R Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase complement(1477407..1478153) Burkholderia phytofirmans PsJN 6282101 YP_001894958.1 CDS Bphyt_1319 NC_010681.1 1478186 1478770 R PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A3240 conserved hypothetical protein 730; hypothetical protein complement(1478186..1478770) Burkholderia phytofirmans PsJN 6283974 YP_001894959.1 CDS Bphyt_1320 NC_010681.1 1478773 1479498 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A3239 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1478773..1479498) Burkholderia phytofirmans PsJN 6283975 YP_001894960.1 CDS Bphyt_1321 NC_010681.1 1479704 1480342 R PFAM: diacylglycerol kinase; KEGG: bxe:Bxe_A3238 diacylglycerol kinase transmembrane protein, DgkA; diacylglycerol kinase complement(1479704..1480342) Burkholderia phytofirmans PsJN 6283976 YP_001894961.1 CDS Bphyt_1322 NC_010681.1 1480363 1481394 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3237 glycosyltransferase; group 1 glycosyl transferase complement(1480363..1481394) Burkholderia phytofirmans PsJN 6283977 YP_001894962.1 CDS Bphyt_1323 NC_010681.1 1481431 1482372 R PFAM: metallophosphoesterase; KEGG: bxe:Bxe_A3236 metallo-phosphoesterase; metallophosphoesterase complement(1481431..1482372) Burkholderia phytofirmans PsJN 6283978 YP_001894963.1 CDS Bphyt_1324 NC_010681.1 1482741 1483265 R PFAM: RDD domain containing protein; KEGG: bxe:Bxe_A3235 transmembrane protein; RDD domain-containing protein complement(1482741..1483265) Burkholderia phytofirmans PsJN 6283979 YP_001894964.1 CDS Bphyt_1325 NC_010681.1 1483282 1484040 R KEGG: bxe:Bxe_A3234 transmembrane protein; transmembrane protein complement(1483282..1484040) Burkholderia phytofirmans PsJN 6283980 YP_001894965.1 CDS Bphyt_1326 NC_010681.1 1484057 1484485 R KEGG: bxe:Bxe_A3233 hypothetical protein; hypothetical protein complement(1484057..1484485) Burkholderia phytofirmans PsJN 6284758 YP_001894966.1 CDS Bphyt_1327 NC_010681.1 1484482 1485045 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(1484482..1485045) Burkholderia phytofirmans PsJN 6284759 YP_001894967.1 CDS Bphyt_1328 NC_010681.1 1485407 1487170 D acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit 1485407..1487170 Burkholderia phytofirmans PsJN 6284760 YP_001894968.1 CDS ilvH NC_010681.1 1487282 1487773 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 1487282..1487773 Burkholderia phytofirmans PsJN 6284761 YP_001894969.1 CDS Bphyt_1330 NC_010681.1 1487893 1488909 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1487893..1488909 Burkholderia phytofirmans PsJN 6284762 YP_001894970.1 CDS Bphyt_1331 NC_010681.1 1489040 1489678 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1489040..1489678 Burkholderia phytofirmans PsJN 6284763 YP_001894971.1 CDS Bphyt_1332 NC_010681.1 1489703 1490569 D TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bxe:Bxe_A3227 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 1489703..1490569 Burkholderia phytofirmans PsJN 6284764 YP_001894972.1 CDS Bphyt_1333 NC_010681.1 1490970 1492517 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1490970..1492517 Burkholderia phytofirmans PsJN 6280965 YP_001894973.1 CDS Bphyt_1334 NC_010681.1 1492636 1494216 R PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: bxe:Bxe_A3224 sulfate transporter; sulfate transporter complement(1492636..1494216) Burkholderia phytofirmans PsJN 6280966 YP_001894974.1 CDS Bphyt_1335 NC_010681.1 1494315 1494950 R PFAM: carbonic anhydrase; KEGG: bxe:Bxe_A3223 carbonic anhydrase protein; carbonate dehydratase complement(1494315..1494950) Burkholderia phytofirmans PsJN 6280967 YP_001894975.1 CDS Bphyt_1336 NC_010681.1 1495178 1495729 R KEGG: bxe:Bxe_A3222 lipoprotein; lipoprotein complement(1495178..1495729) Burkholderia phytofirmans PsJN 6280968 YP_001894976.1 CDS Bphyt_1337 NC_010681.1 1495914 1497320 D KEGG: bch:Bcen2424_2255 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched chain amino acid ABC transporter substrate-binding protein 1495914..1497320 Burkholderia phytofirmans PsJN 6280969 YP_001894977.1 CDS Bphyt_1338 NC_010681.1 1497507 1497779 D PFAM: ribosomal protein S15; KEGG: bxe:Bxe_A3219 ribosomal protein S15; 30S ribosomal protein S15 1497507..1497779 Burkholderia phytofirmans PsJN 6280970 YP_001894978.1 CDS Bphyt_1339 NC_010681.1 1498139 1500295 D KEGG: bxe:Bxe_A3218 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 1498139..1500295 Burkholderia phytofirmans PsJN 6280971 YP_001894979.1 CDS Bphyt_1340 NC_010681.1 1500447 1501463 D TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_A3217 NADPH quinone oxidoreductase; NAD(P)H quinone oxidoreductase 1500447..1501463 Burkholderia phytofirmans PsJN 6284668 YP_001894980.1 CDS tpiA NC_010681.1 1501599 1502378 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1501599..1502378 Burkholderia phytofirmans PsJN 6284669 YP_001894981.1 CDS secG NC_010681.1 1502461 1502838 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: bxe:Bxe_A3215 preprotein translocase subunit SecG; preprotein translocase subunit SecG 1502461..1502838 Burkholderia phytofirmans PsJN 6284670 YP_001894982.1 CDS Bphyt_1343 NC_010681.1 1503199 1503558 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1503199..1503558 Burkholderia phytofirmans PsJN 6284672 YP_001894983.1 CDS Bphyt_1344 NC_010681.1 1503622 1504101 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1503622..1504101 Burkholderia phytofirmans PsJN 6284673 YP_001894984.1 CDS Bphyt_1345 NC_010681.1 1504123 1504725 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1504123..1504725 Burkholderia phytofirmans PsJN 6282441 YP_001894985.1 CDS Bphyt_1346 NC_010681.1 1504735 1505988 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1504735..1505988 Burkholderia phytofirmans PsJN 6282442 YP_001894986.1 CDS Bphyt_1347 NC_010681.1 1506120 1506605 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1506120..1506605 Burkholderia phytofirmans PsJN 6282443 YP_001894987.1 CDS Bphyt_1348 NC_010681.1 1506602 1507930 D KEGG: bxe:Bxe_A3209 NADH dehydrogenase I (chain F), NuoF; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F 1506602..1507930 Burkholderia phytofirmans PsJN 6282444 YP_001894988.1 CDS Bphyt_1349 NC_010681.1 1508053 1510386 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1508053..1510386 Burkholderia phytofirmans PsJN 6282445 YP_001894989.1 CDS Bphyt_1350 NC_010681.1 1510387 1511451 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1510387..1511451 Burkholderia phytofirmans PsJN 6282446 YP_001894990.1 CDS Bphyt_1351 NC_010681.1 1511467 1511955 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1511467..1511955 Burkholderia phytofirmans PsJN 6282447 YP_001894991.1 CDS Bphyt_1352 NC_010681.1 1512150 1512842 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1512150..1512842 Burkholderia phytofirmans PsJN 6281389 YP_001894992.1 CDS Bphyt_1353 NC_010681.1 1512863 1513168 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1512863..1513168 Burkholderia phytofirmans PsJN 6281390 YP_001894993.1 CDS Bphyt_1354 NC_010681.1 1513186 1515273 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1513186..1515273 Burkholderia phytofirmans PsJN 6281391 YP_001894994.1 CDS Bphyt_1355 NC_010681.1 1515288 1516778 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1515288..1516778 Burkholderia phytofirmans PsJN 6281392 YP_001894995.1 CDS Bphyt_1356 NC_010681.1 1516802 1518274 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1516802..1518274 Burkholderia phytofirmans PsJN 6281393 YP_001894996.1 CDS Bphyt_1357 NC_010681.1 1518274 1518570 D KEGG: bxe:Bxe_A3200 hypothetical protein; hypothetical protein 1518274..1518570 Burkholderia phytofirmans PsJN 6281394 YP_001894997.1 CDS Bphyt_1358 NC_010681.1 1518613 1519197 D PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A3199 ADP-ribose pyrophosphatase, MutT/NUDIX family; NUDIX hydrolase 1518613..1519197 Burkholderia phytofirmans PsJN 6281395 YP_001894998.1 CDS Bphyt_1359 NC_010681.1 1519540 1519785 D KEGG: pmy:Pmen_3483 hypothetical protein; hypothetical protein 1519540..1519785 Burkholderia phytofirmans PsJN 6281051 YP_001894999.1 CDS Bphyt_1360 NC_010681.1 1519840 1520364 D PFAM: prophage CP4-57 regulator; KEGG: bxe:Bxe_A3194 transcriptional regulator; phage transcriptional regulator AlpA 1519840..1520364 Burkholderia phytofirmans PsJN 6281052 YP_001895000.1 CDS Bphyt_1361 NC_010681.1 1520593 1521018 D PFAM: protein of unknown function DUF1178; KEGG: bxe:Bxe_A3193 conserved hypothetical protein DUF1178; hypothetical protein 1520593..1521018 Burkholderia phytofirmans PsJN 6281053 YP_001895001.1 CDS Bphyt_1362 NC_010681.1 1521067 1522263 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A3192 pimeloyl-CoA dehydrogenase (large subunit), PimC-like; acyl-CoA dehydrogenase domain-containing protein 1521067..1522263 Burkholderia phytofirmans PsJN 6281054 YP_001895002.1 CDS Bphyt_1363 NC_010681.1 1522274 1523401 D PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A3191 pimeloyl-CoA dehydrogenase (small subunit), PimD-like; acyl-CoA dehydrogenase domain-containing protein 1522274..1523401 Burkholderia phytofirmans PsJN 6281055 YP_001895003.1 CDS Bphyt_1364 NC_010681.1 1523437 1523895 D PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_A3190 (R)-specific enoyl-CoA hydratase, MaoC-like; MaoC domain-containing protein dehydratase 1523437..1523895 Burkholderia phytofirmans PsJN 6281056 YP_001895004.1 CDS Bphyt_1365 NC_010681.1 1523892 1524368 D PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_A3189 nodulation-related acyl dehydratase, MaoC/NodN-like; MaoC domain-containing protein dehydratase 1523892..1524368 Burkholderia phytofirmans PsJN 6281057 YP_001895005.1 CDS Bphyt_1366 NC_010681.1 1524459 1525160 R PFAM: glutathione S-transferase; KEGG: bmu:Bmul_1049 glutathione S-transferase; glutathione S-transferase complement(1524459..1525160) Burkholderia phytofirmans PsJN 6283729 YP_001895006.1 CDS Bphyt_1367 NC_010681.1 1525323 1526582 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A3188 acyl-CoA dehydrogenase oxidoreductase; acyl-CoA dehydrogenase domain-containing protein complement(1525323..1526582) Burkholderia phytofirmans PsJN 6283730 YP_001895007.1 CDS Bphyt_1368 NC_010681.1 1526699 1527805 R PFAM: aminoglycoside phosphotransferase; KEGG: bxe:Bxe_A3187 tyrosine protein kinase/aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(1526699..1527805) Burkholderia phytofirmans PsJN 6283731 YP_001895008.1 CDS Bphyt_1369 NC_010681.1 1527827 1528543 R PFAM: phosphoglycerate mutase; KEGG: bxe:Bxe_A3186 phosphoglycerate mutase; phosphoglycerate mutase complement(1527827..1528543) Burkholderia phytofirmans PsJN 6283732 YP_001895009.1 CDS Bphyt_1370 NC_010681.1 1528555 1529343 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1528555..1529343) Burkholderia phytofirmans PsJN 6283733 YP_001895010.1 CDS Bphyt_1371 NC_010681.1 1529340 1530905 R converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxyacyl-CoA dehydrogenase complement(1529340..1530905) Burkholderia phytofirmans PsJN 6283734 YP_001895011.1 CDS Bphyt_1372 NC_010681.1 1531032 1531679 D PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A3183 glutathione S-transferase; glutathione S-transferase 1531032..1531679 Burkholderia phytofirmans PsJN 6283735 YP_001895012.1 CDS Bphyt_1373 NC_010681.1 1531786 1532958 R catalyzes the transfer of an amino moiety; aminotransferase complement(1531786..1532958) Burkholderia phytofirmans PsJN 6281996 YP_001895013.1 CDS Bphyt_1374 NC_010681.1 1533101 1533598 R KEGG: bxe:Bxe_A3181 protein of unknown function DUF132; hypothetical protein complement(1533101..1533598) Burkholderia phytofirmans PsJN 6281997 YP_001895014.1 CDS Bphyt_1375 NC_010681.1 1533656 1534438 D PFAM: protein of unknown function DUF328; KEGG: bxe:Bxe_A3180 hypothetical protein; hypothetical protein 1533656..1534438 Burkholderia phytofirmans PsJN 6281998 YP_001895015.1 CDS Bphyt_1376 NC_010681.1 1534472 1535626 D PFAM: peptidase M14 carboxypeptidase A; KEGG: bxe:Bxe_A3179 predicted zinc carboxypeptidase; peptidase M14 carboxypeptidase A 1534472..1535626 Burkholderia phytofirmans PsJN 6281999 YP_001895016.1 CDS Bphyt_1377 NC_010681.1 1535746 1536402 R KEGG: bxe:Bxe_A3178 hypothetical protein; hypothetical protein complement(1535746..1536402) Burkholderia phytofirmans PsJN 6282000 YP_001895017.1 CDS Bphyt_1378 NC_010681.1 1536573 1537256 R KEGG: bxe:Bxe_A3177 hypothetical protein; hypothetical protein complement(1536573..1537256) Burkholderia phytofirmans PsJN 6282001 YP_001895018.1 CDS Bphyt_1379 NC_010681.1 1537360 1538238 R PFAM: regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: bxe:Bxe_A3176 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(1537360..1538238) Burkholderia phytofirmans PsJN 6282002 YP_001895019.1 CDS Bphyt_1380 NC_010681.1 1538473 1539687 R KEGG: bxe:Bxe_A3175 hypothetical protein; hypothetical protein complement(1538473..1539687) Burkholderia phytofirmans PsJN 6283742 YP_001895020.1 CDS Bphyt_1381 NC_010681.1 1539958 1541073 D PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_A3174 hypothetical protein; hypothetical protein 1539958..1541073 Burkholderia phytofirmans PsJN 6283743 YP_001895021.1 CDS Bphyt_1382 NC_010681.1 1547236 1548075 D KEGG: bxe:Bxe_A3166 hypothetical protein; hypothetical protein 1547236..1548075 Burkholderia phytofirmans PsJN 6281585 YP_001895022.1 CDS Bphyt_1383 NC_010681.1 1547975 1549756 D KEGG: bxe:Bxe_A3165 hypothetical protein; hypothetical protein 1547975..1549756 Burkholderia phytofirmans PsJN 6281586 YP_001895023.1 CDS Bphyt_1384 NC_010681.1 1549762 1553343 D KEGG: bxe:Bxe_A3164 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1549762..1553343 Burkholderia phytofirmans PsJN 6281226 YP_001895024.1 CDS Bphyt_1385 NC_010681.1 1553464 1554384 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bxe:Bxe_A3163 NAD dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase complement(1553464..1554384) Burkholderia phytofirmans PsJN 6281227 YP_001895025.1 CDS Bphyt_1386 NC_010681.1 1554396 1554635 R PFAM: Heavy metal transport/detoxification protein; KEGG: bxe:Bxe_A3162 heavy metal binding protein; heavy metal transport/detoxification protein complement(1554396..1554635) Burkholderia phytofirmans PsJN 6281228 YP_001895026.1 CDS Bphyt_1387 NC_010681.1 1554759 1555181 D TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; KEGG: bxe:Bxe_A3161 MerR family transcriptional regulator; MerR family transcriptional regulator 1554759..1555181 Burkholderia phytofirmans PsJN 6281229 YP_001895027.1 CDS Bphyt_1388 NC_010681.1 1555486 1555632 D KEGG: bpd:BURPS668_A0597 hypothetical protein; hypothetical protein 1555486..1555632 Burkholderia phytofirmans PsJN 6281230 YP_001895028.1 CDS Bphyt_1389 NC_010681.1 1555861 1556205 D KEGG: bxe:Bxe_A3160 hypothetical protein; hypothetical protein 1555861..1556205 Burkholderia phytofirmans PsJN 6281231 YP_001895029.1 CDS Bphyt_1390 NC_010681.1 1556640 1557680 D PFAM: NMT1/THI5 like domain protein; KEGG: bxe:Bxe_A3159 ABC nitrate/sulfonate/bicarbonate family transporter periplasmic ligand binding protein; NMT1/THI5 like domain-containing protein 1556640..1557680 Burkholderia phytofirmans PsJN 6281232 YP_001895030.1 CDS Bphyt_1391 NC_010681.1 1557869 1558795 R PFAM: protein of unknown function DUF519; KEGG: bxe:Bxe_A3158 protein involved in catabolism of external DNA; hypothetical protein complement(1557869..1558795) Burkholderia phytofirmans PsJN 6284396 YP_001895031.1 CDS Bphyt_1392 NC_010681.1 1558933 1559904 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A3157 voltage-gated potassium channel subunit beta; aldo/keto reductase complement(1558933..1559904) Burkholderia phytofirmans PsJN 6284397 YP_001895032.1 CDS Bphyt_1393 NC_010681.1 1560127 1560924 D catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 1560127..1560924 Burkholderia phytofirmans PsJN 6284398 YP_001895033.1 CDS Bphyt_1394 NC_010681.1 1560935 1562173 D PFAM: patatin; KEGG: bxe:Bxe_A3155 transmembrane protein, patatin-like phospholipase domain; patatin 1560935..1562173 Burkholderia phytofirmans PsJN 6284399 YP_001895034.1 CDS Bphyt_1395 NC_010681.1 1562404 1563603 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(1562404..1563603) Burkholderia phytofirmans PsJN 6284400 YP_001895035.1 CDS Bphyt_1396 NC_010681.1 1564061 1566154 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-subunit beta is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1564061..1566154 Burkholderia phytofirmans PsJN 6284401 YP_001895036.1 CDS Bphyt_1397 NC_010681.1 1566485 1567033 D KEGG: bxe:Bxe_A3152 hypothetical protein; hypothetical protein 1566485..1567033 Burkholderia phytofirmans PsJN 6284402 YP_001895037.1 CDS Bphyt_1398 NC_010681.1 1567199 1567531 D KEGG: bxe:Bxe_A3151 hypothetical protein; hypothetical protein 1567199..1567531 Burkholderia phytofirmans PsJN 6283371 YP_001895038.1 CDS Bphyt_1399 NC_010681.1 1567601 1568446 D PFAM: iron permease FTR1; KEGG: bxe:Bxe_A3150 oxidase-dependent Fe2+ transporter (OFeT)family, FTR1-like; iron permease FTR1 1567601..1568446 Burkholderia phytofirmans PsJN 6283372 YP_001895039.1 CDS Bphyt_1400 NC_010681.1 1568455 1569849 D KEGG: bxe:Bxe_A3149 nitrogen fixation protein VnfA; nitrogen fixation protein VnfA 1568455..1569849 Burkholderia phytofirmans PsJN 6283373 YP_001895040.1 CDS Bphyt_1401 NC_010681.1 1570141 1570401 R KEGG: bxe:Bxe_A3147 hypothetical protein; hypothetical protein complement(1570141..1570401) Burkholderia phytofirmans PsJN 6283374 YP_001895041.1 CDS Bphyt_1402 NC_010681.1 1570595 1571077 R PFAM: Domain of unknown function DUF1857; KEGG: bxe:Bxe_A3146 hypothetical protein; hypothetical protein complement(1570595..1571077) Burkholderia phytofirmans PsJN 6283375 YP_001895042.1 CDS Bphyt_1403 NC_010681.1 1571102 1571500 R PFAM: OsmC family protein; KEGG: bxe:Bxe_A3145 predicted redox protein regulator of disulfide bond formation, OsmC-like; OsmC family protein complement(1571102..1571500) Burkholderia phytofirmans PsJN 6283376 YP_001895043.1 CDS Bphyt_1404 NC_010681.1 1571640 1572518 R PFAM: pirin; KEGG: bxe:Bxe_A3144 chromosome condensation pirin; pirin complement(1571640..1572518) Burkholderia phytofirmans PsJN 6283377 YP_001895044.1 CDS Bphyt_1405 NC_010681.1 1572641 1573630 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3143 LysR family transcriptional regulator; LysR family transcriptional regulator 1572641..1573630 Burkholderia phytofirmans PsJN 6282712 YP_001895045.1 CDS Bphyt_1406 NC_010681.1 1573761 1573883 D hypothetical protein 1573761..1573883 Burkholderia phytofirmans PsJN 6282713 YP_001895046.1 CDS Bphyt_1407 NC_010681.1 1573985 1574404 R PFAM: biopolymertransporter ExbD/TolR; KEGG: bxe:Bxe_A3142 biopolymer transport transmembrane protein, ExbD/TolR like; biopolymertransporter ExbD/TolR complement(1573985..1574404) Burkholderia phytofirmans PsJN 6282714 YP_001895047.1 CDS Bphyt_1408 NC_010681.1 1574421 1575152 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A3141 biopolymer transport transmembrane protein, MotA/TolQ/ExbB like; MotA/TolQ/ExbB proton channel complement(1574421..1575152) Burkholderia phytofirmans PsJN 6282715 YP_001895048.1 CDS Bphyt_1409 NC_010681.1 1575179 1575913 R TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: bxe:Bxe_A3140 TonB protein; TonB family protein complement(1575179..1575913) Burkholderia phytofirmans PsJN 6282716 YP_001895049.1 CDS Bphyt_1410 NC_010681.1 1576180 1576416 R PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_A3139 bacterioferritin-associated ferredoxin; BFD (2Fe-2S)-binding domain-containing protein complement(1576180..1576416) Burkholderia phytofirmans PsJN 6282717 YP_001895050.1 CDS Bphyt_1411 NC_010681.1 1576632 1577486 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(1576632..1577486) Burkholderia phytofirmans PsJN 6282718 YP_001895051.1 CDS Bphyt_1412 NC_010681.1 1577663 1578142 R TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: bxe:Bxe_A3137 bacterioferritin; bacterioferritin complement(1577663..1578142) Burkholderia phytofirmans PsJN 6283096 YP_001895052.1 CDS Bphyt_1413 NC_010681.1 1578332 1579855 R TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit alpha; hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: bxe:Bxe_A3136 tartrate/fumarate Fe-S type hydro-lyases; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha complement(1578332..1579855) Burkholderia phytofirmans PsJN 6283097 YP_001895053.1 CDS Bphyt_1414 NC_010681.1 1579911 1580522 R PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A3135 hypothetical protein; hypothetical protein complement(1579911..1580522) Burkholderia phytofirmans PsJN 6283098 YP_001895054.1 CDS Bphyt_1415 NC_010681.1 1580829 1581689 R PFAM: protein of unknown function DUF6 transmembrane; protein of unknown function DUF250; KEGG: bur:Bcep18194_A5521 protein of unknown function DUF6, transmembrane; hypothetical protein complement(1580829..1581689) Burkholderia phytofirmans PsJN 6283099 YP_001895055.1 CDS Bphyt_1416 NC_010681.1 1582248 1584230 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 1582248..1584230 Burkholderia phytofirmans PsJN 6283100 YP_001895056.1 CDS Bphyt_1417 NC_010681.1 1584378 1584758 D KEGG: bxe:Bxe_A3112 predicted membrane protein; hypothetical protein 1584378..1584758 Burkholderia phytofirmans PsJN 6283101 YP_001895057.1 CDS Bphyt_1418 NC_010681.1 1584763 1586781 D PFAM: Na+/solute symporter; KEGG: bxe:Bxe_A3111 solute/Na+ symporter; Na+/solute symporter 1584763..1586781 Burkholderia phytofirmans PsJN 6283102 YP_001895058.1 CDS Bphyt_1419 NC_010681.1 1587043 1588176 D PFAM: acyltransferase 3; KEGG: bxe:Bxe_A3032 membrane protein, acyltransferase family; acyltransferase 3 1587043..1588176 Burkholderia phytofirmans PsJN 6283020 YP_001895059.1 CDS Bphyt_1420 NC_010681.1 1588298 1589560 D PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3031 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein 1588298..1589560 Burkholderia phytofirmans PsJN 6283021 YP_001895060.1 CDS Bphyt_1421 NC_010681.1 1589578 1590489 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A3027 10 TMS drug/metabolite exporter, DME family, DMT superfamily; hypothetical protein complement(1589578..1590489) Burkholderia phytofirmans PsJN 6283022 YP_001895061.1 CDS Bphyt_1422 NC_010681.1 1590615 1591544 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3026 LysR family transcriptional regulator; LysR family transcriptional regulator 1590615..1591544 Burkholderia phytofirmans PsJN 6283023 YP_001895062.1 CDS Bphyt_1423 NC_010681.1 1591636 1592727 D PFAM: L-asparaginase II; KEGG: bxe:Bxe_A3025 L-asparaginase II; L-asparaginase II 1591636..1592727 Burkholderia phytofirmans PsJN 6283024 YP_001895063.1 CDS Bphyt_1424 NC_010681.1 1592992 1593969 R PFAM: response regulator receiver; CheW domain protein; KEGG: bxe:Bxe_A3018 CheW protein; response regulator receiver modulated CheW protein complement(1592992..1593969) Burkholderia phytofirmans PsJN 6282610 YP_001895064.1 CDS Bphyt_1425 NC_010681.1 1594383 1594943 D KEGG: bxe:Bxe_A3017 hypothetical protein; hypothetical protein 1594383..1594943 Burkholderia phytofirmans PsJN 6282611 YP_001895065.1 CDS Bphyt_1426 NC_010681.1 1595113 1596837 D PFAM: hypothetical protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_A3016 TPR/sulfotransferase domain protein, FlbA-like; hypothetical protein 1595113..1596837 Burkholderia phytofirmans PsJN 6282612 YP_001895066.1 CDS Bphyt_1427 NC_010681.1 1596947 1597972 D PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A3015 oxidoreductase, MocA; aldo/keto reductase 1596947..1597972 Burkholderia phytofirmans PsJN 6282613 YP_001895067.1 CDS Bphyt_1428 NC_010681.1 1598021 1598764 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A3012 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1598021..1598764) Burkholderia phytofirmans PsJN 6282614 YP_001895068.1 CDS Bphyt_1429 NC_010681.1 1598927 1599838 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3011 LysR family transcriptional regulator; LysR family transcriptional regulator 1598927..1599838 Burkholderia phytofirmans PsJN 6282615 YP_001895069.1 CDS Bphyt_1430 NC_010681.1 1599849 1600298 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_4647 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1599849..1600298) Burkholderia phytofirmans PsJN 6282616 YP_001895070.1 CDS Bphyt_1431 NC_010681.1 1600331 1601341 R PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A3010 glutathione S-transferase protein; glutathione S-transferase complement(1600331..1601341) Burkholderia phytofirmans PsJN 6282517 YP_001895071.1 CDS Bphyt_1432 NC_010681.1 1601573 1602496 D PFAM: regulatory protein MarR; regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3009 transcriptional regulator, LysR family; MarR family transcriptional regulator 1601573..1602496 Burkholderia phytofirmans PsJN 6282518 YP_001895072.1 CDS Bphyt_1433 NC_010681.1 1602624 1602941 D KEGG: bxe:Bxe_A3008 hypothetical protein; hypothetical protein 1602624..1602941 Burkholderia phytofirmans PsJN 6282519 YP_001895073.1 CDS Bphyt_1434 NC_010681.1 1602911 1603837 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3007 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1602911..1603837) Burkholderia phytofirmans PsJN 6282520 YP_001895074.1 CDS Bphyt_1435 NC_010681.1 1603970 1605736 D PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A3006 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1603970..1605736 Burkholderia phytofirmans PsJN 6282521 YP_001895075.1 CDS Bphyt_1436 NC_010681.1 1605733 1606938 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A3005 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1605733..1606938 Burkholderia phytofirmans PsJN 6282522 YP_001895076.1 CDS Bphyt_1437 NC_010681.1 1607010 1608323 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3004 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein 1607010..1608323 Burkholderia phytofirmans PsJN 6282523 YP_001895077.1 CDS Bphyt_1438 NC_010681.1 1608635 1614586 D KEGG: bxe:Bxe_A3001 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter; SMART: ATPase AAA; excinuclease ABC subunit A 1608635..1614586 Burkholderia phytofirmans PsJN 6282510 YP_001895078.1 CDS Bphyt_1439 NC_010681.1 1614886 1615047 R hypothetical protein complement(1614886..1615047) Burkholderia phytofirmans PsJN 6282511 YP_001895079.1 CDS Bphyt_1440 NC_010681.1 1615573 1616280 D TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: bxe:Bxe_A3000 TonB protein; TonB family protein 1615573..1616280 Burkholderia phytofirmans PsJN 6282512 YP_001895080.1 CDS Bphyt_1441 NC_010681.1 1616357 1617262 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A2999 biopolymer transport transmembrane protein, ExbB/TolQ; MotA/TolQ/ExbB proton channel 1616357..1617262 Burkholderia phytofirmans PsJN 6282513 YP_001895081.1 CDS Bphyt_1442 NC_010681.1 1617275 1617697 D PFAM: biopolymertransporter ExbD/TolR; KEGG: bxe:Bxe_A2998 biopolymer transporter ExbD/TolR; biopolymertransporter ExbD/TolR 1617275..1617697 Burkholderia phytofirmans PsJN 6282514 YP_001895082.1 CDS Bphyt_1443 NC_010681.1 1617722 1618150 D PFAM: biopolymertransporter ExbD/TolR; KEGG: bxe:Bxe_A2997 biopolymer transporter ExbD/TolR; biopolymertransporter ExbD/TolR 1617722..1618150 Burkholderia phytofirmans PsJN 6282515 YP_001895083.1 CDS Bphyt_1444 NC_010681.1 1618160 1619344 D KEGG: bxe:Bxe_A2996 hypothetical protein; hypothetical protein 1618160..1619344 Burkholderia phytofirmans PsJN 6282516 YP_001895084.1 CDS Bphyt_1445 NC_010681.1 1619444 1619596 D hypothetical protein 1619444..1619596 Burkholderia phytofirmans PsJN 6281699 YP_001895085.1 CDS Bphyt_1446 NC_010681.1 1619642 1620217 D PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_A2995 transcriptional regulator, XRE(MerR) family with cupin sensor domain; XRE family transcriptional regulator 1619642..1620217 Burkholderia phytofirmans PsJN 6281700 YP_001895086.1 CDS Bphyt_1447 NC_010681.1 1620522 1623266 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_A2994 TonB-dependent receptor; TonB-dependent receptor 1620522..1623266 Burkholderia phytofirmans PsJN 6281701 YP_001895087.1 CDS Bphyt_1448 NC_010681.1 1623549 1625504 D PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A2993 ABC peptide transporter periplasmic ligand binding protein; family 5 extracellular solute-binding protein 1623549..1625504 Burkholderia phytofirmans PsJN 6281702 YP_001895088.1 CDS Bphyt_1449 NC_010681.1 1625513 1626565 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2992 ABC transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1625513..1626565 Burkholderia phytofirmans PsJN 6281703 YP_001895089.1 CDS Bphyt_1450 NC_010681.1 1626519 1627634 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2991 ABC transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1626519..1627634 Burkholderia phytofirmans PsJN 6281704 YP_001895090.1 CDS Bphyt_1451 NC_010681.1 1627631 1629298 D PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: bxe:Bxe_A2990 ABC transporter ATPase; ABC transporter 1627631..1629298 Burkholderia phytofirmans PsJN 6281705 YP_001895091.1 CDS Bphyt_1452 NC_010681.1 1629291 1630727 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bxe:Bxe_A2989 Zn-dependent protease modulator of DNA gyrase TldD; peptidase U62 modulator of DNA gyrase 1629291..1630727 Burkholderia phytofirmans PsJN 6280901 YP_001895092.1 CDS Bphyt_1453 NC_010681.1 1630727 1632088 D KEGG: bxe:Bxe_A2988 hypothetical protein; hypothetical protein 1630727..1632088 Burkholderia phytofirmans PsJN 6280902 YP_001895093.1 CDS Bphyt_1454 NC_010681.1 1632093 1632674 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A2987 ribosomal-protein-alanine acetyltransferase, GNAT family; N-acetyltransferase GCN5 1632093..1632674 Burkholderia phytofirmans PsJN 6280903 YP_001895094.1 CDS Bphyt_1455 NC_010681.1 1632679 1633227 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A2986 acetyltransferase protein, GNAT family; N-acetyltransferase GCN5 1632679..1633227 Burkholderia phytofirmans PsJN 6280904 YP_001895095.1 CDS Bphyt_1456 NC_010681.1 1633241 1636453 D TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A2985 hydrophobe/amphiphile efflux pump, RND family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1633241..1636453 Burkholderia phytofirmans PsJN 6280905 YP_001895096.1 CDS Bphyt_1457 NC_010681.1 1636715 1636876 R hypothetical protein complement(1636715..1636876) Burkholderia phytofirmans PsJN 6280906 YP_001895097.1 CDS Bphyt_1458 NC_010681.1 1637141 1638136 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A2983 AraC family transcriptional regulator; AraC family transcriptional regulator 1637141..1638136 Burkholderia phytofirmans PsJN 6280907 YP_001895098.1 CDS Bphyt_1459 NC_010681.1 1638248 1638799 D KEGG: bxe:Bxe_A2982 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1638248..1638799 Burkholderia phytofirmans PsJN 6282935 YP_001895099.1 CDS Bphyt_1460 NC_010681.1 1638851 1639741 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A2981 10 TMS drug/metabolite exporter, DME family, DMT superfamily; hypothetical protein complement(1638851..1639741) Burkholderia phytofirmans PsJN 6282936 YP_001895100.1 CDS Bphyt_1461 NC_010681.1 1639849 1640754 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2980 LysR family transcriptional regulator; LysR family transcriptional regulator 1639849..1640754 Burkholderia phytofirmans PsJN 6282937 YP_001895101.1 CDS Bphyt_1462 NC_010681.1 1640860 1641489 D PFAM: GCN5-related N-acetyltransferase; KEGG: bcm:Bcenmc03_5104 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1640860..1641489 Burkholderia phytofirmans PsJN 6282938 YP_001895102.1 CDS Bphyt_1463 NC_010681.1 1641701 1641862 R PFAM: protein of unknown function DUF1328; KEGG: bxe:Bxe_A2977 membrane protein, DUF1328; hypothetical protein complement(1641701..1641862) Burkholderia phytofirmans PsJN 6282939 YP_001895103.1 CDS Bphyt_1464 NC_010681.1 1642065 1643042 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7648 transcriptional regulator, LysR family; LysR family transcriptional regulator 1642065..1643042 Burkholderia phytofirmans PsJN 6282940 YP_001895104.1 CDS Bphyt_1465 NC_010681.1 1643152 1644642 D TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase_; KEGG: bur:Bcep18194_C7647 betaine-aldehyde dehydrogenase; 2-hydroxymuconic semialdehyde dehydrogenase 1643152..1644642 Burkholderia phytofirmans PsJN 6282941 YP_001895105.1 CDS Bphyt_1466 NC_010681.1 1644639 1645460 D PFAM: Hydratase/decarboxylase; KEGG: bur:Bcep18194_C7646 4-oxalocrotonate decarboxylase; 4-oxalocrotonate decarboxylase 1644639..1645460 Burkholderia phytofirmans PsJN 6282497 YP_001895106.1 CDS Bphyt_1467 NC_010681.1 1645472 1646416 D catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 1645472..1646416 Burkholderia phytofirmans PsJN 6282498 YP_001895107.1 CDS Bphyt_1468 NC_010681.1 1646430 1647473 D catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 1646430..1647473 Burkholderia phytofirmans PsJN 6282499 YP_001895108.1 CDS Bphyt_1469 NC_010681.1 1647470 1648243 D PFAM: Hydratase/decarboxylase; KEGG: bur:Bcep18194_C7643 4-oxalocrotonate decarboxylase; 4-oxalocrotonate decarboxylase 1647470..1648243 Burkholderia phytofirmans PsJN 6282500 YP_001895109.1 CDS Bphyt_1470 NC_010681.1 1648240 1648671 D PFAM: endoribonuclease L-PSP; KEGG: bur:Bcep18194_C7642 endoribonuclease L-PSP; endoribonuclease L-PSP 1648240..1648671 Burkholderia phytofirmans PsJN 6282501 YP_001895110.1 CDS Bphyt_1471 NC_010681.1 1648702 1649226 D catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde in the final enzymatic step of quinolinate biosynthesis; 3-hydroxyanthranilate 3,4-dioxygenase 1648702..1649226 Burkholderia phytofirmans PsJN 6282502 YP_001895111.1 CDS Bphyt_1472 NC_010681.1 1649259 1650263 D PFAM: amidohydrolase 2; KEGG: bur:Bcep18194_C7640 aminocarboxymuconate-semialdehyde decarboxylase; aminocarboxymuconate-semialdehyde decarboxylase 1649259..1650263 Burkholderia phytofirmans PsJN 6282503 YP_001895112.1 CDS Bphyt_1473 NC_010681.1 1650331 1651560 D TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: bur:Bcep18194_C7639 kynureninase; kynureninase 1650331..1651560 Burkholderia phytofirmans PsJN 6284103 YP_001895113.1 CDS Bphyt_1474 NC_010681.1 1651676 1653076 D PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7638 amino acid transporter; amino acid permease-associated protein 1651676..1653076 Burkholderia phytofirmans PsJN 6284104 YP_001895114.1 CDS Bphyt_1476 NC_010681.1 1653374 1653709 R PFAM: cytochrome C class I; KEGG: bur:Bcep18194_C7662 cytochrome C, class I; cytochrome C class I complement(1653374..1653709) Burkholderia phytofirmans PsJN 6284106 YP_001895115.1 CDS Bphyt_1477 NC_010681.1 1653830 1655647 R KEGG: bur:Bcep18194_C7661 hypothetical protein; hypothetical protein complement(1653830..1655647) Burkholderia phytofirmans PsJN 6284107 YP_001895116.1 CDS Bphyt_1478 NC_010681.1 1655667 1656707 R PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_C7660 outer membrane protein (porin); porin complement(1655667..1656707) Burkholderia phytofirmans PsJN 6284108 YP_001895117.1 CDS Bphyt_1479 NC_010681.1 1656911 1657936 R PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_C7659 outer membrane protein (porin); porin complement(1656911..1657936) Burkholderia phytofirmans PsJN 6284109 YP_001895118.1 CDS Bphyt_1480 NC_010681.1 1658022 1658966 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bur:Bcep18194_C7658 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(1658022..1658966) Burkholderia phytofirmans PsJN 6282809 YP_001895119.1 CDS Bphyt_1481 NC_010681.1 1658975 1659403 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_C7657 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1658975..1659403) Burkholderia phytofirmans PsJN 6282810 YP_001895120.1 CDS Bphyt_1482 NC_010681.1 1659609 1660565 D PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_C7656 lipase, active site; alpha/beta hydrolase 1659609..1660565 Burkholderia phytofirmans PsJN 6282811 YP_001895121.1 CDS Bphyt_1483 NC_010681.1 1660616 1661563 D PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_C7655 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 1660616..1661563 Burkholderia phytofirmans PsJN 6282812 YP_001895122.1 CDS Bphyt_1484 NC_010681.1 1661614 1662273 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bur:Bcep18194_C7654 GntR family transcriptional regulator; GntR family transcriptional regulator complement(1661614..1662273) Burkholderia phytofirmans PsJN 6282813 YP_001895123.1 CDS Bphyt_1485 NC_010681.1 1662550 1663470 D PFAM: fumarylacetoacetate hydrolase; KEGG: bur:Bcep18194_C7653 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1662550..1663470 Burkholderia phytofirmans PsJN 6282814 YP_001895124.1 CDS Bphyt_1486 NC_010681.1 1663509 1664576 D PFAM: NMT1/THI5 like domain protein; KEGG: bur:Bcep18194_C7652 ABC nitrate/sulfonate/bicarbonate transporter inner membrane subunit; NMT1/THI5 like domain-containing protein 1663509..1664576 Burkholderia phytofirmans PsJN 6282815 YP_001895125.1 CDS Bphyt_1487 NC_010681.1 1664632 1665237 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_C7651 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1664632..1665237 Burkholderia phytofirmans PsJN 6280772 YP_001895126.1 CDS Bphyt_1488 NC_010681.1 1665250 1665993 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bur:Bcep18194_C7650 ABC nitrate/sulfonate/bicarbonate transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1665250..1665993 Burkholderia phytofirmans PsJN 6280773 YP_001895127.1 CDS Bphyt_1489 NC_010681.1 1665993 1666844 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bur:Bcep18194_C7649 ABC nitrate/sulfonate/bicarbonate transporter ATPase subunit; ABC transporter 1665993..1666844 Burkholderia phytofirmans PsJN 6280774 YP_001895128.1 CDS Bphyt_1490 NC_010681.1 1666931 1667803 R KEGG: rso:RS01997 hypothetical signal peptide protein; hypothetical protein complement(1666931..1667803) Burkholderia phytofirmans PsJN 6280775 YP_001895129.1 CDS Bphyt_1491 NC_010681.1 1668478 1671390 D KEGG: bxe:Bxe_A2975 hypothetical protein; hypothetical protein 1668478..1671390 Burkholderia phytofirmans PsJN 6280776 YP_001895130.1 CDS Bphyt_1492 NC_010681.1 1671380 1675363 D KEGG: bxe:Bxe_A2974 signal peptide protein, TPR domain-containing; signal peptide protein 1671380..1675363 Burkholderia phytofirmans PsJN 6280777 YP_001895131.1 CDS Bphyt_1493 NC_010681.1 1675401 1675952 D KEGG: bxe:Bxe_A2973 hypothetical protein; hypothetical protein 1675401..1675952 Burkholderia phytofirmans PsJN 6280778 YP_001895132.1 CDS Bphyt_1494 NC_010681.1 1676043 1677455 D KEGG: bxe:Bxe_A2972 transmembrane protein; transmembrane protein 1676043..1677455 Burkholderia phytofirmans PsJN 6282205 YP_001895133.1 CDS Bphyt_1495 NC_010681.1 1677448 1678458 D KEGG: bxe:Bxe_A2971 transmembrane protein; transmembrane protein 1677448..1678458 Burkholderia phytofirmans PsJN 6282206 YP_001895134.1 CDS Bphyt_1496 NC_010681.1 1678455 1680107 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2970 lipopolysaccharide N-acetylglucosaminyltransferase; group 1 glycosyl transferase 1678455..1680107 Burkholderia phytofirmans PsJN 6282207 YP_001895135.1 CDS Bphyt_1497 NC_010681.1 1680107 1681480 D KEGG: bxe:Bxe_A2969 transmembrane protein; transmembrane protein 1680107..1681480 Burkholderia phytofirmans PsJN 6282208 YP_001895136.1 CDS Bphyt_1498 NC_010681.1 1681617 1682792 D KEGG: bxe:Bxe_A2968 hypothetical protein; hypothetical protein 1681617..1682792 Burkholderia phytofirmans PsJN 6282209 YP_001895137.1 CDS Bphyt_1499 NC_010681.1 1682849 1683766 D KEGG: reh:H16_B2204 hypothetical protein; hypothetical protein 1682849..1683766 Burkholderia phytofirmans PsJN 6282210 YP_001895138.1 CDS Bphyt_1500 NC_010681.1 1683801 1684823 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: bxe:Bxe_A3705 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 1683801..1684823 Burkholderia phytofirmans PsJN 6282211 YP_001895139.1 CDS Bphyt_1501 NC_010681.1 1684887 1686704 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1684887..1686704 Burkholderia phytofirmans PsJN 6283045 YP_001895140.1 CDS Bphyt_1502 NC_010681.1 1687069 1687419 D KEGG: bxe:Bxe_A2872 hypothetical protein; hypothetical protein 1687069..1687419 Burkholderia phytofirmans PsJN 6283046 YP_001895141.1 CDS Bphyt_1503 NC_010681.1 1687419 1687637 D KEGG: bur:Bcep18194_A6335 hypothetical protein; hypothetical protein 1687419..1687637 Burkholderia phytofirmans PsJN 6283047 YP_001895142.1 CDS Bphyt_1504 NC_010681.1 1687932 1688723 R KEGG: bur:Bcep18194_B2628 hypothetical protein; hypothetical protein complement(1687932..1688723) Burkholderia phytofirmans PsJN 6283048 YP_001895143.1 CDS Bphyt_1505 NC_010681.1 1688780 1690348 D PFAM: regulatory protein LuxR; metal-dependent phosphohydrolase HD sub domain; KEGG: bcm:Bcenmc03_6289 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1688780..1690348 Burkholderia phytofirmans PsJN 6283049 YP_001895144.1 CDS Bphyt_1506 NC_010681.1 1690454 1691071 R PFAM: lysine exporter (LYSE/YGGA); KEGG: bxe:Bxe_A2963 basic amino acid exporter, LysE family; lysine exporter protein LysE/YggA complement(1690454..1691071) Burkholderia phytofirmans PsJN 6283050 YP_001895145.1 CDS Bphyt_1507 NC_010681.1 1691169 1692062 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 1691169..1692062 Burkholderia phytofirmans PsJN 6283051 YP_001895146.1 CDS Bphyt_1508 NC_010681.1 1692200 1692826 R PFAM: carbonic anhydrase; KEGG: bpd:BURPS668_1281 carbonic anhydrase; carbonate dehydratase complement(1692200..1692826) Burkholderia phytofirmans PsJN 6281819 YP_001895147.1 CDS Bphyt_1509 NC_010681.1 1693109 1694524 R TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A2961 heavy metal sensor signal transduction histidine kinases (STHK); heavy metal sensor signal transduction histidine kinase complement(1693109..1694524) Burkholderia phytofirmans PsJN 6281820 YP_001895148.1 CDS Bphyt_1510 NC_010681.1 1694521 1695204 R TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator; KEGG: bxe:Bxe_A2960 two component heavy metal response transcriptional regulator, winged helix family; two component heavy metal response transcriptional regulator, winged helix family complement(1694521..1695204) Burkholderia phytofirmans PsJN 6281821 YP_001895149.1 CDS Bphyt_1511 NC_010681.1 1695228 1695596 R KEGG: bxe:Bxe_A2959 hypothetical protein; hypothetical protein complement(1695228..1695596) Burkholderia phytofirmans PsJN 6281822 YP_001895150.1 CDS Bphyt_1512 NC_010681.1 1696023 1697360 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_A2958 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH dehydrogenase complement(1696023..1697360) Burkholderia phytofirmans PsJN 6281823 YP_001895151.1 CDS Bphyt_1513 NC_010681.1 1697587 1698567 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2957 LysR family transcriptional regulator; LysR family transcriptional regulator 1697587..1698567 Burkholderia phytofirmans PsJN 6281824 YP_001895152.1 CDS Bphyt_1514 NC_010681.1 1698848 1700434 D PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_B1011 cytosine/purines, uracil, thiamine, allantoin transporter; cytosine/purines uracil thiamine allantoin permease 1698848..1700434 Burkholderia phytofirmans PsJN 6281825 YP_001895153.1 CDS Bphyt_1515 NC_010681.1 1700503 1701894 D PFAM: FAD dependent oxidoreductase; KEGG: bmu:Bmul_5196 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1700503..1701894 Burkholderia phytofirmans PsJN 6283794 YP_001895154.1 CDS Bphyt_1516 NC_010681.1 1702008 1702379 R PFAM: protein of unknown function DUF861 cupin_3; KEGG: pla:Plav_2281 protein of unknown function DUF861 cupin_3; hypothetical protein complement(1702008..1702379) Burkholderia phytofirmans PsJN 6283795 YP_001895155.1 CDS Bphyt_1517 NC_010681.1 1702593 1704029 D PFAM: aldehyde dehydrogenase_; KEGG: mlo:mll2219 aldehyde dehydrogenase; aldehyde dehydrogenase 1702593..1704029 Burkholderia phytofirmans PsJN 6283796 YP_001895156.1 CDS Bphyt_1518 NC_010681.1 1704052 1705002 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2956 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1704052..1705002) Burkholderia phytofirmans PsJN 6283797 YP_001895157.1 CDS Bphyt_1519 NC_010681.1 1705120 1706292 D KEGG: bxe:Bxe_A2955 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1705120..1706292 Burkholderia phytofirmans PsJN 6283798 YP_001895158.1 CDS Bphyt_1520 NC_010681.1 1706360 1707721 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2954 major facilitator superfamily (MFS) metabolite transporter; general substrate transporter 1706360..1707721 Burkholderia phytofirmans PsJN 6283799 YP_001895159.1 CDS Bphyt_1521 NC_010681.1 1708548 1709801 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2953 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(1708548..1709801) Burkholderia phytofirmans PsJN 6283800 YP_001895160.1 CDS Bphyt_1522 NC_010681.1 1709798 1710760 R KEGG: bxe:Bxe_A2952 hypothetical protein; hypothetical protein complement(1709798..1710760) Burkholderia phytofirmans PsJN 6280759 YP_001895161.1 CDS Bphyt_1523 NC_010681.1 1711214 1712596 D PFAM: xanthine/uracil/vitamin C permease; sulfate transporter; KEGG: bxe:Bxe_A2951 nucleobase/cation symporter, (NCS2) family; xanthine/uracil/vitamin C permease 1711214..1712596 Burkholderia phytofirmans PsJN 6280760 YP_001895162.1 CDS Bphyt_1525 NC_010681.1 1713208 1713636 D PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: pla:Plav_3201 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 1713208..1713636 Burkholderia phytofirmans PsJN 6280762 YP_001895163.1 CDS Bphyt_1526 NC_010681.1 1713684 1714421 D PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bbr:BB0213 hypothetical protein; hypothetical protein 1713684..1714421 Burkholderia phytofirmans PsJN 6280763 YP_001895164.1 CDS Bphyt_1527 NC_010681.1 1714522 1714704 R KEGG: bxe:Bxe_A2950 hypothetical protein; hypothetical protein complement(1714522..1714704) Burkholderia phytofirmans PsJN 6280764 YP_001895165.1 CDS Bphyt_1528 NC_010681.1 1714897 1715856 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: bxe:Bxe_A2949 NAD dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(1714897..1715856) Burkholderia phytofirmans PsJN 6280765 YP_001895166.1 CDS Bphyt_1529 NC_010681.1 1715927 1716823 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2948 LysR family transcriptional regulator; LysR family transcriptional regulator 1715927..1716823 Burkholderia phytofirmans PsJN 6283573 YP_001895167.1 CDS Bphyt_1530 NC_010681.1 1717207 1718730 D catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 1717207..1718730 Burkholderia phytofirmans PsJN 6283574 YP_001895168.1 CDS Bphyt_1531 NC_010681.1 1718756 1719451 D TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_A2946 transcriptional regulator, histidine utilization repressor, GntR family; transcriptional regulator, histidine utilization repressor, GntR family 1718756..1719451 Burkholderia phytofirmans PsJN 6283575 YP_001895169.1 CDS Bphyt_1532 NC_010681.1 1719514 1721202 D catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1719514..1721202 Burkholderia phytofirmans PsJN 6283576 YP_001895170.1 CDS Bphyt_1533 NC_010681.1 1721220 1721846 D PFAM: protein of unknown function DUF886; KEGG: bxe:Bxe_A2944 conserved hypothetical protein DUF886; hypothetical protein 1721220..1721846 Burkholderia phytofirmans PsJN 6283577 YP_001895171.1 CDS Bphyt_1534 NC_010681.1 1721932 1723155 D catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 1721932..1723155 Burkholderia phytofirmans PsJN 6283578 YP_001895172.1 CDS Bphyt_1535 NC_010681.1 1723164 1724570 D catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glu; N-formimino-L-glutamate deiminase 1723164..1724570 Burkholderia phytofirmans PsJN 6283579 YP_001895173.1 CDS Bphyt_1536 NC_010681.1 1724647 1725462 D PFAM: N-formylglutamate amidohydrolase; KEGG: bxe:Bxe_A2941 N-formylglutamate deformylase; N-formylglutamate amidohydrolase 1724647..1725462 Burkholderia phytofirmans PsJN 6282243 YP_001895174.1 CDS Bphyt_1537 NC_010681.1 1726193 1726858 D KEGG: bxe:Bxe_A2940 hypothetical protein; hypothetical protein 1726193..1726858 Burkholderia phytofirmans PsJN 6282244 YP_001895175.1 CDS Bphyt_1538 NC_010681.1 1726998 1728911 D KEGG: bxe:Bxe_A2939 transmembrane protein; transmembrane protein 1726998..1728911 Burkholderia phytofirmans PsJN 6282245 YP_001895176.1 CDS Bphyt_1539 NC_010681.1 1728973 1730124 R PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A2938 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched chain amino acid ABC transporter substrate-binding protein complement(1728973..1730124) Burkholderia phytofirmans PsJN 6282246 YP_001895177.1 CDS Bphyt_1540 NC_010681.1 1730710 1731171 R KEGG: bxe:Bxe_A2937 hypothetical protein; hypothetical protein complement(1730710..1731171) Burkholderia phytofirmans PsJN 6282247 YP_001895178.1 CDS Bphyt_1541 NC_010681.1 1731389 1732327 R KEGG: bxe:Bxe_A2936 pyridoxal kinase; TIGRFAM: pyridoxal kinase; PFAM: PfkB domain protein; phosphomethylpyrimidine kinase type-1; pyridoxal kinase complement(1731389..1732327) Burkholderia phytofirmans PsJN 6282248 YP_001895179.1 CDS glgA NC_010681.1 1732539 1733999 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(1732539..1733999) Burkholderia phytofirmans PsJN 6283787 YP_001895180.1 CDS Bphyt_1543 NC_010681.1 1734063 1735325 R TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: nucleotidyl transferase; KEGG: bxe:Bxe_A2934 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase complement(1734063..1735325) Burkholderia phytofirmans PsJN 6283788 YP_001895181.1 CDS Bphyt_1544 NC_010681.1 1735627 1736847 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A2933 hydrolase protein, transmembrane, alpha/beta hydrolase family fold; alpha/beta fold family hydrolase 1735627..1736847 Burkholderia phytofirmans PsJN 6283789 YP_001895182.1 CDS Bphyt_1545 NC_010681.1 1736936 1737931 R PFAM: monooxygenase; KEGG: bxe:Bxe_A2932 flavin-dpendent alkanal monooxygenase, luciferase-like; monooxygenase complement(1736936..1737931) Burkholderia phytofirmans PsJN 6283790 YP_001895183.1 CDS Bphyt_1546 NC_010681.1 1738248 1739327 D PFAM: monooxygenase; KEGG: bam:Bamb_3680 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 1738248..1739327 Burkholderia phytofirmans PsJN 6283791 YP_001895184.1 CDS Bphyt_1547 NC_010681.1 1739339 1740163 D PFAM: class II aldolase/adducin family protein; KEGG: bam:Bamb_3679 hypothetical protein; hypothetical protein 1739339..1740163 Burkholderia phytofirmans PsJN 6283792 YP_001895185.1 CDS Bphyt_1548 NC_010681.1 1740292 1740900 D PFAM: cysteine dioxygenase type I; KEGG: ppg:PputGB1_2513 cysteine dioxygenase type I; cysteine dioxygenase type I 1740292..1740900 Burkholderia phytofirmans PsJN 6283793 YP_001895186.1 CDS Bphyt_1549 NC_010681.1 1740897 1742498 D PFAM: rhodanese; KEGG: bxe:Bxe_A2930 thiosulfate sulfurtransferase, rhodanese domain-containing; rhodanese 1740897..1742498 Burkholderia phytofirmans PsJN 6282328 YP_001895187.1 CDS Bphyt_1550 NC_010681.1 1742504 1743415 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psp:PSPPH_3611 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1742504..1743415) Burkholderia phytofirmans PsJN 6282329 YP_001895188.1 CDS Bphyt_1551 NC_010681.1 1743640 1744587 D TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bmu:Bmul_4340 aliphatic sulfonates family ABC transporter periplasmic ligand-binding protein; aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein 1743640..1744587 Burkholderia phytofirmans PsJN 6282330 YP_001895189.1 CDS Bphyt_1552 NC_010681.1 1745148 1745699 D KEGG: bxe:Bxe_A2929 lipoprotein; lipoprotein 1745148..1745699 Burkholderia phytofirmans PsJN 6282331 YP_001895190.1 CDS Bphyt_1553 NC_010681.1 1745728 1746681 D PFAM: patatin; KEGG: bxe:Bxe_A2928 patatin-like phospholipase; patatin 1745728..1746681 Burkholderia phytofirmans PsJN 6282332 YP_001895191.1 CDS Bphyt_1554 NC_010681.1 1746951 1747640 D TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2927 ABC lysine/arginine/ornithine transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 1746951..1747640 Burkholderia phytofirmans PsJN 6282333 YP_001895192.1 CDS Bphyt_1555 NC_010681.1 1747645 1748358 D TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2926 ABC lysine/arginine/ornithine transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 1747645..1748358 Burkholderia phytofirmans PsJN 6281071 YP_001895193.1 CDS Bphyt_1556 NC_010681.1 1748440 1749231 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A2925 ABC lysine/arginine/ornithine transporter ATPase; ABC transporter 1748440..1749231 Burkholderia phytofirmans PsJN 6281072 YP_001895194.1 CDS Bphyt_1557 NC_010681.1 1749257 1750306 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A2924 arginine regulatory protein, ArgR, AraC family; AraC family transcriptional regulator 1749257..1750306 Burkholderia phytofirmans PsJN 6281073 YP_001895195.1 CDS argD NC_010681.1 1750448 1751683 D DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase 1750448..1751683 Burkholderia phytofirmans PsJN 6281074 YP_001895196.1 CDS Bphyt_1559 NC_010681.1 1751725 1752783 D KEGG: bxe:Bxe_A2922 arginine N-succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine/ornithine succinyltransferase, subunit alpha; PFAM: arginine N-succinyltransferase subunit beta; arginine/ornithine succinyltransferase subunit alpha 1751725..1752783 Burkholderia phytofirmans PsJN 6281075 YP_001895197.1 CDS Bphyt_1560 NC_010681.1 1752780 1753820 D KEGG: bxe:Bxe_A2921 arginine N-succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine N-succinyltransferase; PFAM: arginine N-succinyltransferase subunit beta; arginine N-succinyltransferase 1752780..1753820 Burkholderia phytofirmans PsJN 6281076 YP_001895198.1 CDS astD NC_010681.1 1753823 1755286 D a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 1753823..1755286 Burkholderia phytofirmans PsJN 6281826 YP_001895199.1 CDS Bphyt_1562 NC_010681.1 1755296 1756636 D catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 1755296..1756636 Burkholderia phytofirmans PsJN 6281827 YP_001895200.1 CDS Bphyt_1563 NC_010681.1 1756644 1757672 D catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 1756644..1757672 Burkholderia phytofirmans PsJN 6281828 YP_001895201.1 CDS Bphyt_1564 NC_010681.1 1757740 1758360 R PFAM: glutathione S-transferase; KEGG: rso:RSc3309 probable glutathione S-transferase protein; glutathione S-transferase complement(1757740..1758360) Burkholderia phytofirmans PsJN 6281829 YP_001895202.1 CDS Bphyt_1565 NC_010681.1 1758487 1759395 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_I1782 LysR family transcriptional regulator; LysR family transcriptional regulator 1758487..1759395 Burkholderia phytofirmans PsJN 6281830 YP_001895203.1 CDS Bphyt_1566 NC_010681.1 1759642 1760436 D TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A2917 ABC lysine/arginine/ornithine transporter periplasmic ligand binding protein; cationic amino acid ABC transporter periplasmic binding protein 1759642..1760436 Burkholderia phytofirmans PsJN 6281831 YP_001895204.1 CDS Bphyt_1567 NC_010681.1 1760531 1761289 R converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase complement(1760531..1761289) Burkholderia phytofirmans PsJN 6281832 YP_001895205.1 CDS Bphyt_1568 NC_010681.1 1761553 1762935 D PFAM: EAL domain protein; metal-dependent hydrolase HDOD; KEGG: bxe:Bxe_A2915 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 1761553..1762935 Burkholderia phytofirmans PsJN 6281213 YP_001895206.1 CDS Bphyt_1569 NC_010681.1 1763072 1764529 R PFAM: metal-dependent hydrolase HDOD; KEGG: bxe:Bxe_A2914 signal transduction protein-like; signal transduction protein complement(1763072..1764529) Burkholderia phytofirmans PsJN 6281214 YP_001895207.1 CDS Bphyt_1570 NC_010681.1 1764633 1766447 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: bxe:Bxe_A2913 diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC sensor(s); PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(1764633..1766447) Burkholderia phytofirmans PsJN 6281215 YP_001895208.1 CDS Bphyt_1571 NC_010681.1 1766748 1768085 D PFAM: EAL domain protein; metal-dependent hydrolase HDOD; KEGG: bxe:Bxe_A2912 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 1766748..1768085 Burkholderia phytofirmans PsJN 6281216 YP_001895209.1 CDS Bphyt_1572 NC_010681.1 1768285 1768848 D PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bxe:Bxe_A2911 peroxiredoxin, bacterioferritin comigratory protein; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen 1768285..1768848 Burkholderia phytofirmans PsJN 6281217 YP_001895210.1 CDS Bphyt_1573 NC_010681.1 1768967 1769431 D KEGG: bxe:Bxe_A2910 signal peptide transmembrane protein; signal peptide transmembrane protein 1768967..1769431 Burkholderia phytofirmans PsJN 6281218 YP_001895211.1 CDS Bphyt_1574 NC_010681.1 1769817 1771094 R PFAM: transposase mutator type; KEGG: bcm:Bcenmc03_6788 transposase mutator type; transposase mutator type complement(1769817..1771094) Burkholderia phytofirmans PsJN 6281636 YP_001895212.1 CDS Bphyt_1575 NC_010681.1 1771171 1774494 R PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A2909 RND multidrug efflux pump, AcrB/AcrD/AcrF family; acriflavin resistance protein complement(1771171..1774494) Burkholderia phytofirmans PsJN 6281637 YP_001895213.1 CDS Bphyt_1576 NC_010681.1 1774498 1777632 R PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A2908 RND multidrug efflux pump, AcrB/AcrD/AcrF family; acriflavin resistance protein complement(1774498..1777632) Burkholderia phytofirmans PsJN 6281638 YP_001895214.1 CDS Bphyt_1577 NC_010681.1 1777651 1778955 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: bxe:Bxe_A2907 RND efflux pump, membrane fusion protein, CzcB subfamily; RND family efflux transporter MFP subunit complement(1777651..1778955) Burkholderia phytofirmans PsJN 6281639 YP_001895215.1 CDS Bphyt_1578 NC_010681.1 1779428 1780252 R PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: bxe:Bxe_A2906 IclR family transcriptional regulator; IclR family transcriptional regulator complement(1779428..1780252) Burkholderia phytofirmans PsJN 6281640 YP_001895216.1 CDS Bphyt_1579 NC_010681.1 1780790 1781925 D PFAM: transposase IS3/IS911 family protein; KEGG: bps:BPSS2148a transposase; transposase IS3/IS911 family protein join(1780790..1781044,1781044..1781925) Burkholderia phytofirmans PsJN 6281641 YP_001895217.1 CDS Bphyt_1582 NC_010681.1 1782692 1783063 D KEGG: sru:SRU_2224 photoactive yellow protein; photoactive yellow protein 1782692..1783063 Burkholderia phytofirmans PsJN 6280767 YP_001895218.1 CDS Bphyt_1583 NC_010681.1 1783066 1784400 D KEGG: sth:STH3108 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1783066..1784400 Burkholderia phytofirmans PsJN 6280768 YP_001895219.1 CDS Bphyt_1584 NC_010681.1 1784467 1785258 D PFAM: EAL domain protein; KEGG: pfo:Pfl_0264 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 1784467..1785258 Burkholderia phytofirmans PsJN 6280769 YP_001895220.1 CDS Bphyt_1586 NC_010681.1 1785509 1785781 D KEGG: reh:H16_A2520 hypothetical protein; hypothetical protein 1785509..1785781 Burkholderia phytofirmans PsJN 6280771 YP_001895221.1 CDS Bphyt_1587 NC_010681.1 1785853 1786155 R KEGG: reu:Reut_A1690 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase; muconolactone delta-isomerase complement(1785853..1786155) Burkholderia phytofirmans PsJN 6284732 YP_001895222.1 CDS Bphyt_1588 NC_010681.1 1786249 1787376 R TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: mandelate racemase/muconate lactonizing protein; KEGG: reu:Reut_A1689 mandelate racemase/muconate lactonizing enzyme; muconate and chloromuconate cycloisomerase complement(1786249..1787376) Burkholderia phytofirmans PsJN 6284733 YP_001895223.1 CDS Bphyt_1589 NC_010681.1 1787482 1788405 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bps:BPSS1902 LysR-family transcriptional regulator; LysR family transcriptional regulator complement(1787482..1788405) Burkholderia phytofirmans PsJN 6284734 YP_001895224.1 CDS Bphyt_1590 NC_010681.1 1788580 1789515 D TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bmu:Bmul_3237 catechol 1,2-dioxygenase; catechol 1,2-dioxygenase 1788580..1789515 Burkholderia phytofirmans PsJN 6284735 YP_001895225.1 CDS Bphyt_1591 NC_010681.1 1789628 1790986 D PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, subunit alpha-like; KEGG: bch:Bcen2424_6524 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 1789628..1790986 Burkholderia phytofirmans PsJN 6284736 YP_001895226.1 CDS Bphyt_1592 NC_010681.1 1790983 1791471 D KEGG: bur:Bcep18194_C7047 2-chlorobenzoate 1,2-dioxygenase; TIGRFAM: benzoate 1,2-dioxygenase, small subunit; PFAM: aromatic-ring-hydroxylating dioxygenase subunit beta; benzoate 1,2-dioxygenase small subunit 1790983..1791471 Burkholderia phytofirmans PsJN 6284737 YP_001895227.1 CDS Bphyt_1593 NC_010681.1 1791510 1792532 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: bmu:Bmul_3240 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1791510..1792532 Burkholderia phytofirmans PsJN 6284738 YP_001895228.1 CDS benD NC_010681.1 1792529 1793305 D catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 1792529..1793305 Burkholderia phytofirmans PsJN 6284357 YP_001895229.1 CDS Bphyt_1595 NC_010681.1 1793402 1795393 R PFAM: coenzyme A transferase; KEGG: bja:bll0888 hypothetical protein; coenzyme A transferase complement(1793402..1795393) Burkholderia phytofirmans PsJN 6284358 YP_001895230.1 CDS Bphyt_1596 NC_010681.1 1795605 1796183 D KEGG: bxe:Bxe_A2057 hypothetical protein; hypothetical protein 1795605..1796183 Burkholderia phytofirmans PsJN 6284359 YP_001895231.1 CDS Bphyt_1597 NC_010681.1 1796385 1796669 R KEGG: bxe:Bxe_B1161 hypothetical protein; hypothetical protein complement(1796385..1796669) Burkholderia phytofirmans PsJN 6284360 YP_001895232.1 CDS Bphyt_1598 NC_010681.1 1797582 1797800 R hypothetical protein complement(1797582..1797800) Burkholderia phytofirmans PsJN 6284361 YP_001895233.1 CDS Bphyt_1599 NC_010681.1 1798615 1799259 D KEGG: reh:H16_A0052 hypothetical protein; hypothetical protein 1798615..1799259 Burkholderia phytofirmans PsJN 6284362 YP_001895234.1 CDS Bphyt_1600 NC_010681.1 1799809 1800189 R TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: bxe:Bxe_A2870 camphor resistance CrcB protein; CrcB protein complement(1799809..1800189) Burkholderia phytofirmans PsJN 6281763 YP_001895235.1 CDS Bphyt_1601 NC_010681.1 1800587 1801774 R PFAM: Rh family protein/ammonium transporter; KEGG: bxe:Bxe_A2869 ammonium transporter; Rh family protein/ammonium transporter complement(1800587..1801774) Burkholderia phytofirmans PsJN 6281764 YP_001895236.1 CDS Bphyt_1602 NC_010681.1 1802178 1803926 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: bxe:Bxe_A2867 signal transduction histidine kinases (STHK); histidine kinase 1802178..1803926 Burkholderia phytofirmans PsJN 6281765 YP_001895237.1 CDS Bphyt_1603 NC_010681.1 1803930 1804253 R KEGG: bxe:Bxe_A2866 hypothetical protein; hypothetical protein complement(1803930..1804253) Burkholderia phytofirmans PsJN 6281766 YP_001895238.1 CDS Bphyt_1604 NC_010681.1 1804396 1804977 R TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bxe:Bxe_A2865 peptidase C56, PfpI; PfpI family intracellular protease complement(1804396..1804977) Burkholderia phytofirmans PsJN 6281767 YP_001895239.1 CDS Bphyt_1605 NC_010681.1 1805281 1805754 D KEGG: bxe:Bxe_A2864 hypothetical protein; hypothetical protein 1805281..1805754 Burkholderia phytofirmans PsJN 6281768 YP_001895240.1 CDS Bphyt_1606 NC_010681.1 1805842 1806297 D PFAM: protein of unknown function UPF0074; KEGG: bxe:Bxe_A2863 Rrf2 family/BadM/Rrf2 family transcriptional regulator/Rrf2 family; BadM/Rrf2 family transcriptional regulator 1805842..1806297 Burkholderia phytofirmans PsJN 6282673 YP_001895241.1 CDS Bphyt_1607 NC_010681.1 1806442 1807089 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_A2862 NADH-flavin reductase protein; NAD-dependent epimerase/dehydratase 1806442..1807089 Burkholderia phytofirmans PsJN 6282674 YP_001895242.1 CDS Bphyt_1608 NC_010681.1 1807268 1809898 D PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_A2861 small conductance mechanosensitive channel ion channel; mechanosensitive ion channel protein MscS 1807268..1809898 Burkholderia phytofirmans PsJN 6282675 YP_001895243.1 CDS Bphyt_1609 NC_010681.1 1810099 1810767 R PFAM: cysteine dioxygenase type I; KEGG: bxe:Bxe_A2860 predicted metal-dependent enzyme of the double-stranded beta helix superfamily; cysteine dioxygenase type I complement(1810099..1810767) Burkholderia phytofirmans PsJN 6282676 YP_001895244.1 CDS Bphyt_1610 NC_010681.1 1810903 1811379 D PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_A2859 AsnC family transcriptional regulator; AsnC family transcriptional regulator 1810903..1811379 Burkholderia phytofirmans PsJN 6282677 YP_001895245.1 CDS Bphyt_1611 NC_010681.1 1811583 1811792 D KEGG: bxe:Bxe_A2841 signal peptide transmembrane protein; signal peptide transmembrane protein 1811583..1811792 Burkholderia phytofirmans PsJN 6282678 YP_001895246.1 CDS Bphyt_1612 NC_010681.1 1811820 1814375 R PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: bxe:Bxe_A2840 aromatic acid exporter, ArAE family; hypothetical protein complement(1811820..1814375) Burkholderia phytofirmans PsJN 6282679 YP_001895247.1 CDS Bphyt_1613 NC_010681.1 1814603 1817977 D TIGRFAM: exodeoxyribonuclease V, subunit gamma; PFAM: exodeoxyribonuclease V RecC subunit; KEGG: bxe:Bxe_A2839 exodeoxyribonuclease V, RecC subunit; exodeoxyribonuclease V subunit gamma 1814603..1817977 Burkholderia phytofirmans PsJN 6281870 YP_001895248.1 CDS Bphyt_1614 NC_010681.1 1817974 1821672 D TIGRFAM: exodeoxyribonuclease V subunit beta; PFAM: UvrD/REP helicase; KEGG: bxe:Bxe_A2838 exodeoxyribonuclease V subunit beta; exodeoxyribonuclease V subunit beta 1817974..1821672 Burkholderia phytofirmans PsJN 6281871 YP_001895249.1 CDS Bphyt_1615 NC_010681.1 1821669 1823756 D KEGG: bxe:Bxe_A2837 exodeoxyribonuclease V, alpha subunit; TIGRFAM: exodeoxyribonuclease V, subunit alpha; SMART: ATPase AAA; exodeoxyribonuclease V subunit alpha 1821669..1823756 Burkholderia phytofirmans PsJN 6281872 YP_001895250.1 CDS Bphyt_1616 NC_010681.1 1823780 1824421 R KEGG: bxe:Bxe_A2836 transmembrane protein; transmembrane protein complement(1823780..1824421) Burkholderia phytofirmans PsJN 6281873 YP_001895251.1 CDS Bphyt_1617 NC_010681.1 1824575 1824979 D PFAM: class I peptide chain release factor; KEGG: bxe:Bxe_A2835 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein 1824575..1824979 Burkholderia phytofirmans PsJN 6281874 YP_001895252.1 CDS Bphyt_1618 NC_010681.1 1824976 1826316 R PFAM: EAL domain protein; KEGG: bxe:Bxe_A2834 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase complement(1824976..1826316) Burkholderia phytofirmans PsJN 6281875 YP_001895253.1 CDS Bphyt_1619 NC_010681.1 1826870 1827160 D PFAM: antibiotic biosynthesis monooxygenase; KEGG: bxe:Bxe_A2833 hypothetical protein; antibiotic biosynthesis monooxygenase 1826870..1827160 Burkholderia phytofirmans PsJN 6283747 YP_001895254.1 CDS Bphyt_1620 NC_010681.1 1827244 1827501 R KEGG: bxe:Bxe_A2832 hypothetical protein; hypothetical protein complement(1827244..1827501) Burkholderia phytofirmans PsJN 6283748 YP_001895255.1 CDS Bphyt_1621 NC_010681.1 1827758 1827997 R KEGG: bxe:Bxe_A2831 signal peptide protein; signal peptide protein complement(1827758..1827997) Burkholderia phytofirmans PsJN 6283749 YP_001895256.1 CDS Bphyt_1622 NC_010681.1 1828249 1829037 R PFAM: protein of unknown function DUF218; KEGG: bxe:Bxe_A2830 lipoprotein transmembrane; hypothetical protein complement(1828249..1829037) Burkholderia phytofirmans PsJN 6283750 YP_001895257.1 CDS Bphyt_1623 NC_010681.1 1829235 1829558 D KEGG: bxe:Bxe_A2829 hypothetical protein; hypothetical protein 1829235..1829558 Burkholderia phytofirmans PsJN 6283751 YP_001895258.1 CDS Bphyt_1624 NC_010681.1 1829874 1830128 R KEGG: bxe:Bxe_A2828 hypothetical protein; hypothetical protein complement(1829874..1830128) Burkholderia phytofirmans PsJN 6283752 YP_001895259.1 CDS Bphyt_1625 NC_010681.1 1830419 1830820 R KEGG: bxe:Bxe_A2827 transposase A protein; transposase A protein complement(1830419..1830820) Burkholderia phytofirmans PsJN 6283753 YP_001895260.1 CDS Bphyt_1626 NC_010681.1 1831227 1832129 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2826 LysR family transcriptional regulator; LysR family transcriptional regulator 1831227..1832129 Burkholderia phytofirmans PsJN 6283213 YP_001895261.1 CDS Bphyt_1627 NC_010681.1 1832523 1833749 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1832523..1833749 Burkholderia phytofirmans PsJN 6283214 YP_001895262.1 CDS Bphyt_1628 NC_010681.1 1834119 1835303 D TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: bxe:Bxe_A2824 predicted transcriptional regulator; segregation and condensation protein B 1834119..1835303 Burkholderia phytofirmans PsJN 6283215 YP_001895263.1 CDS Bphyt_1629 NC_010681.1 1835368 1837248 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bxe:Bxe_A2823 pseudouridine synthase, Rsu; pseudouridine synthase 1835368..1837248 Burkholderia phytofirmans PsJN 6283216 YP_001895264.1 CDS Bphyt_1630 NC_010681.1 1837780 1838238 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1837780..1838238 Burkholderia phytofirmans PsJN 6283217 YP_001895265.1 CDS nusA NC_010681.1 1838235 1839710 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1838235..1839710 Burkholderia phytofirmans PsJN 6283218 YP_001895266.1 CDS infB NC_010681.1 1839804 1842764 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1839804..1842764 Burkholderia phytofirmans PsJN 6284566 YP_001895267.1 CDS rbfA NC_010681.1 1842980 1843345 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1842980..1843345 Burkholderia phytofirmans PsJN 6284567 YP_001895268.1 CDS truB NC_010681.1 1843440 1844375 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1843440..1844375 Burkholderia phytofirmans PsJN 6284568 YP_001895269.1 CDS Bphyt_1635 NC_010681.1 1844505 1846067 R TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2817 major facilitator superfamily (MFS) multidrug efflux pump; EmrB/QacA subfamily drug resistance transporter complement(1844505..1846067) Burkholderia phytofirmans PsJN 6284569 YP_001895270.1 CDS Bphyt_1636 NC_010681.1 1846099 1847373 R TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: bxe:Bxe_A2816 MFS efflux system, membrane fusion protein, EmrA subfamily; efflux pump membrane protein complement(1846099..1847373) Burkholderia phytofirmans PsJN 6284570 YP_001895271.1 CDS Bphyt_1637 NC_010681.1 1847455 1848963 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A2815 MFS efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein complement(1847455..1848963) Burkholderia phytofirmans PsJN 6284571 YP_001895272.1 CDS Bphyt_1638 NC_010681.1 1849013 1849528 R PFAM: regulatory protein MarR; KEGG: bxe:Bxe_A2814 MarR family transcriptional regulator; MarR family transcriptional regulator complement(1849013..1849528) Burkholderia phytofirmans PsJN 6284572 YP_001895273.1 CDS Bphyt_1639 NC_010681.1 1849848 1851674 D TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: bxe:Bxe_A2813 GTP-binding protein TypA; GTP-binding protein TypA 1849848..1851674 Burkholderia phytofirmans PsJN 6284071 YP_001895274.1 CDS sucA NC_010681.1 1852061 1854922 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1852061..1854922 Burkholderia phytofirmans PsJN 6284072 YP_001895275.1 CDS Bphyt_1641 NC_010681.1 1855067 1856353 D component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1855067..1856353 Burkholderia phytofirmans PsJN 6284073 YP_001895276.1 CDS Bphyt_1642 NC_010681.1 1856514 1857944 D E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1856514..1857944 Burkholderia phytofirmans PsJN 6284074 YP_001895277.1 CDS Bphyt_1643 NC_010681.1 1858034 1859131 D PFAM: AFG1-family ATPase; KEGG: bxe:Bxe_A2809 ATPase, AFG1-like; AFG1 family ATPase 1858034..1859131 Burkholderia phytofirmans PsJN 6284075 YP_001895278.1 CDS Bphyt_1644 NC_010681.1 1859292 1859741 D KEGG: bxe:Bxe_A2808 transposase protein; transposase protein 1859292..1859741 Burkholderia phytofirmans PsJN 6284076 YP_001895279.1 CDS Bphyt_1645 NC_010681.1 1859853 1860338 R KEGG: bxe:Bxe_A2807 signal peptide protein; signal peptide protein complement(1859853..1860338) Burkholderia phytofirmans PsJN 6281095 YP_001895280.1 CDS Bphyt_1646 NC_010681.1 1860596 1862305 R PFAM: polypeptide-transport-associated domain protein ShlB-type; KEGG: bxe:Bxe_A2806 hemolysin activation/secretion signal peptide protein, FhaC/HxuB; polypeptide-transport-associated domain-containing protein complement(1860596..1862305) Burkholderia phytofirmans PsJN 6281096 YP_001895281.1 CDS Bphyt_1647 NC_010681.1 1862590 1864005 R KEGG: bxe:Bxe_A2805 membrane protein, glycine-rich; hypothetical protein complement(1862590..1864005) Burkholderia phytofirmans PsJN 6281097 YP_001895282.1 CDS Bphyt_1648 NC_010681.1 1864184 1865683 R KEGG: bxe:Bxe_A2804 membrane protein, glycine-rich; hypothetical protein complement(1864184..1865683) Burkholderia phytofirmans PsJN 6281098 YP_001895283.1 CDS Bphyt_1649 NC_010681.1 1866339 1866518 D PFAM: Flp/Fap pilin component; KEGG: bxe:Bxe_A2802 pilus subunit protein, PilA like; Flp/Fap pilin component 1866339..1866518 Burkholderia phytofirmans PsJN 6281099 YP_001895284.1 CDS Bphyt_1650 NC_010681.1 1866659 1867159 D PFAM: peptidase A24A prepilin type IV; KEGG: bxe:Bxe_A2801 prepilin peptidase transmembrane protein, CpaA like; peptidase A24A prepilin type IV 1866659..1867159 Burkholderia phytofirmans PsJN 6281100 YP_001895285.1 CDS Bphyt_1651 NC_010681.1 1867156 1867653 D PFAM: TadE family protein; KEGG: bxe:Bxe_A2800 transmembrane protein; TadE family protein 1867156..1867653 Burkholderia phytofirmans PsJN 6282745 YP_001895286.1 CDS Bphyt_1652 NC_010681.1 1867754 1868704 D TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: bxe:Bxe_A2799 signal peptide protein, CpaB like; Flp pilus assembly protein CpaB 1867754..1868704 Burkholderia phytofirmans PsJN 6282746 YP_001895287.1 CDS Bphyt_1653 NC_010681.1 1868747 1870153 D PFAM: type II and III secretion system protein; KEGG: bxe:Bxe_A2798 outer membrane channel signal peptide protein, CpaC like; type II and III secretion system protein 1868747..1870153 Burkholderia phytofirmans PsJN 6282747 YP_001895288.1 CDS Bphyt_1654 NC_010681.1 1870286 1871527 D KEGG: bxe:Bxe_A2797 pilus assembly protein, CpaE-like; pilus assembly protein, CpaE-like protein 1870286..1871527 Burkholderia phytofirmans PsJN 6282748 YP_001895289.1 CDS Bphyt_1655 NC_010681.1 1871531 1872940 D PFAM: type II secretion system protein E; KEGG: bxe:Bxe_A2796 type II/IV secretion ATPase protein, TadA; type II secretion system protein E 1871531..1872940 Burkholderia phytofirmans PsJN 6282749 YP_001895290.1 CDS Bphyt_1656 NC_010681.1 1872933 1873961 D PFAM: type II secretion system protein; KEGG: bxe:Bxe_A2795 tight adherence TadB related transmembrane protein; type II secretion system protein 1872933..1873961 Burkholderia phytofirmans PsJN 6282750 YP_001895291.1 CDS Bphyt_1657 NC_010681.1 1873964 1874974 D PFAM: type II secretion system protein; KEGG: bxe:Bxe_A2794 tight adherence TadC related transmembrane protein; type II secretion system protein 1873964..1874974 Burkholderia phytofirmans PsJN 6282751 YP_001895292.1 CDS Bphyt_1658 NC_010681.1 1874984 1875838 D PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: bxe:Bxe_A2793 lipoprotein transmembrane; hypothetical protein 1874984..1875838 Burkholderia phytofirmans PsJN 6282886 YP_001895293.1 CDS Bphyt_1659 NC_010681.1 1875886 1876200 D KEGG: bxe:Bxe_A2792 hypothetical protein; hypothetical protein 1875886..1876200 Burkholderia phytofirmans PsJN 6282887 YP_001895294.1 CDS Bphyt_1660 NC_010681.1 1876289 1878079 D KEGG: bxe:Bxe_A2791 predicted membrane protein; cyclic nucleotide-binding protein 1876289..1878079 Burkholderia phytofirmans PsJN 6282888 YP_001895295.1 CDS Bphyt_1661 NC_010681.1 1878090 1879481 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: bxe:Bxe_A2790 sigma54 specific Fis family transcriptional regulator; Fis family transcriptional regulator 1878090..1879481 Burkholderia phytofirmans PsJN 6282889 YP_001895296.1 CDS Bphyt_1662 NC_010681.1 1879529 1880257 D KEGG: bxe:Bxe_A2789 signal peptide protein; signal peptide protein 1879529..1880257 Burkholderia phytofirmans PsJN 6282890 YP_001895297.1 CDS Bphyt_1663 NC_010681.1 1880666 1880854 R KEGG: bxe:Bxe_A2788 hypothetical protein; hypothetical protein complement(1880666..1880854) Burkholderia phytofirmans PsJN 6282891 YP_001895298.1 CDS Bphyt_1664 NC_010681.1 1880978 1881439 D KEGG: bxe:Bxe_A2787 hypothetical protein; hypothetical protein 1880978..1881439 Burkholderia phytofirmans PsJN 6282377 YP_001895299.1 CDS Bphyt_1665 NC_010681.1 1881460 1881978 R TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: bxe:Bxe_A2786 conserved nucleoprotein, Hfg, host factor I like protein; RNA chaperone Hfq complement(1881460..1881978) Burkholderia phytofirmans PsJN 6282378 YP_001895300.1 CDS Bphyt_1666 NC_010681.1 1882540 1883070 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_A2784 sigma-24 (FecI); ECF subfamily RNA polymerase sigma-24 subunit 1882540..1883070 Burkholderia phytofirmans PsJN 6282379 YP_001895301.1 CDS Bphyt_1667 NC_010681.1 1883070 1883921 D KEGG: bxe:Bxe_A2783 transmembrane transcriptional regulator(anti-sigma factor) protein, PrtR; transmembrane anti-sigma factor 1883070..1883921 Burkholderia phytofirmans PsJN 6282380 YP_001895302.1 CDS Bphyt_1668 NC_010681.1 1884195 1884662 D KEGG: bxe:Bxe_A2782 lipoprotein; lipoprotein 1884195..1884662 Burkholderia phytofirmans PsJN 6282381 YP_001895303.1 CDS Bphyt_1669 NC_010681.1 1884929 1886506 D PFAM: FAD linked oxidase; KEGG: bxe:Bxe_A2781 flavoprotein subunit p-cresol methylhydroxylase, PchF; FAD linked oxidase 1884929..1886506 Burkholderia phytofirmans PsJN 6282382 YP_001895304.1 CDS Bphyt_1670 NC_010681.1 1886627 1887085 D KEGG: bxe:Bxe_A2780 hypothetical secreted protein; hypothetical protein 1886627..1887085 Burkholderia phytofirmans PsJN 6282383 YP_001895305.1 CDS Bphyt_1671 NC_010681.1 1887082 1888185 R KEGG: bxe:Bxe_A2779 signal peptide transmembrane protein; signal peptide transmembrane protein complement(1887082..1888185) Burkholderia phytofirmans PsJN 6284351 YP_001895306.1 CDS Bphyt_1672 NC_010681.1 1888223 1890028 R PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A2778 long chain fatty-acid CoA ligase(long-chain acyl-CoA synthetase); AMP-dependent synthetase and ligase complement(1888223..1890028) Burkholderia phytofirmans PsJN 6284352 YP_001895307.1 CDS Bphyt_1673 NC_010681.1 1890164 1891465 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(1890164..1891465) Burkholderia phytofirmans PsJN 6284353 YP_001895308.1 CDS Bphyt_1674 NC_010681.1 1891625 1892569 R PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_A2776 (R)-specific enoyl-CoA hydratase, MaoC-like; MaoC domain-containing protein dehydratase complement(1891625..1892569) Burkholderia phytofirmans PsJN 6284354 YP_001895309.1 CDS fabG NC_010681.1 1892572 1893990 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(1892572..1893990) Burkholderia phytofirmans PsJN 6284355 YP_001895310.1 CDS fadE NC_010681.1 1894148 1896646 R functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase complement(1894148..1896646) Burkholderia phytofirmans PsJN 6284356 YP_001895311.1 CDS Bphyt_1677 NC_010681.1 1897071 1897937 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A2773 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1897071..1897937) Burkholderia phytofirmans PsJN 6284116 YP_001895312.1 CDS Bphyt_1678 NC_010681.1 1898298 1899518 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2772 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(1898298..1899518) Burkholderia phytofirmans PsJN 6284117 YP_001895313.1 CDS Bphyt_1679 NC_010681.1 1899927 1900301 D KEGG: bmu:Bmul_4503 membrane protein-like protein; hypothetical protein 1899927..1900301 Burkholderia phytofirmans PsJN 6284118 YP_001895314.1 CDS Bphyt_1680 NC_010681.1 1900377 1900898 D PFAM: GCN5-related N-acetyltransferase; KEGG: bte:BTH_I2526 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1900377..1900898 Burkholderia phytofirmans PsJN 6284119 YP_001895315.1 CDS Bphyt_1681 NC_010681.1 1901045 1902376 D PFAM: chloride channel core; KEGG: bxe:Bxe_A2770 chloride channel protein, voltage gated; chloride channel core 1901045..1902376 Burkholderia phytofirmans PsJN 6284120 YP_001895316.1 CDS Bphyt_1682 NC_010681.1 1902674 1905187 D KEGG: bxe:Bxe_A1505 glucose dehydrogenase(pyrroloquinoline-quinone); TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: pyrrolo-quinoline quinone; membrane-bound PQQ-dependent dehydrogenase 1902674..1905187 Burkholderia phytofirmans PsJN 6284121 YP_001895317.1 CDS Bphyt_1683 NC_010681.1 1905532 1911033 D KEGG: bpt:Bpet3930 serine/threonine kinase with two-component sensor domain; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; serine/threonine protein kinase; PAS sensor protein 1905532..1911033 Burkholderia phytofirmans PsJN 6284122 YP_001895318.1 CDS Bphyt_1685 NC_010681.1 1911664 1912311 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bpt:Bpet3928 two component response regulator; LuxR family transcriptional regulator complement(1911664..1912311) Burkholderia phytofirmans PsJN 6284026 YP_001895319.1 CDS Bphyt_1686 NC_010681.1 1912542 1912676 R hypothetical protein complement(1912542..1912676) Burkholderia phytofirmans PsJN 6284027 YP_001895320.1 CDS Bphyt_1687 NC_010681.1 1912724 1913182 R hypothetical protein complement(1912724..1913182) Burkholderia phytofirmans PsJN 6284028 YP_001895321.1 CDS Bphyt_1688 NC_010681.1 1913577 1914209 D KEGG: har:HEAR0579 conserved hypothetical protein, thioredoxin-like fold; hypothetical protein 1913577..1914209 Burkholderia phytofirmans PsJN 6284029 YP_001895322.1 CDS Bphyt_1689 NC_010681.1 1914561 1914983 D KEGG: bvi:Bcep1808_3763 hypothetical protein; hypothetical protein 1914561..1914983 Burkholderia phytofirmans PsJN 6284030 YP_001895323.1 CDS Bphyt_1690 NC_010681.1 1915321 1916343 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_4973 LysR family transcriptional regulator; LysR family transcriptional regulator 1915321..1916343 Burkholderia phytofirmans PsJN 6283485 YP_001895324.1 CDS Bphyt_1691 NC_010681.1 1916538 1917248 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1786 short-chain alcohol dehydrogenase of unknown specificity; short-chain dehydrogenase/reductase SDR complement(1916538..1917248) Burkholderia phytofirmans PsJN 6283486 YP_001895325.1 CDS Bphyt_1692 NC_010681.1 1917688 1918362 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_5529 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1917688..1918362 Burkholderia phytofirmans PsJN 6283487 YP_001895326.1 CDS Bphyt_1693 NC_010681.1 1918405 1919289 R PFAM: enoyl-CoA hydratase/isomerase; KEGG: ret:RHE_PF00542 probable enoyl-CoA hydratase protein; enoyl-CoA hydratase/isomerase complement(1918405..1919289) Burkholderia phytofirmans PsJN 6283488 YP_001895327.1 CDS Bphyt_1694 NC_010681.1 1919755 1921080 D PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: bur:Bcep18194_C7708 epoxide hydrolase; epoxide hydrolase domain-containing protein 1919755..1921080 Burkholderia phytofirmans PsJN 6283489 YP_001895328.1 CDS Bphyt_1695 NC_010681.1 1921218 1922756 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_B4486 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(1921218..1922756) Burkholderia phytofirmans PsJN 6283490 YP_001895329.1 CDS Bphyt_1696 NC_010681.1 1922753 1923829 R PFAM: secretion protein HlyD; KEGG: reu:Reut_B4487 secretion protein HlyD; secretion protein HlyD complement(1922753..1923829) Burkholderia phytofirmans PsJN 6284090 YP_001895330.1 CDS Bphyt_1697 NC_010681.1 1923842 1925341 R PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4488 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1923842..1925341) Burkholderia phytofirmans PsJN 6284091 YP_001895331.1 CDS Bphyt_1698 NC_010681.1 1926152 1926703 R KEGG: ani:AN9009.2 hypothetical protein; hypothetical protein complement(1926152..1926703) Burkholderia phytofirmans PsJN 6284092 YP_001895332.1 CDS Bphyt_1700 NC_010681.1 1927708 1928649 D PFAM: aldo/keto reductase; KEGG: aba:acid345_2661 aldehyde reductase; aldehyde reductase 1927708..1928649 Burkholderia phytofirmans PsJN 6284094 YP_001895333.1 CDS Bphyt_1701 NC_010681.1 1928680 1929063 D KEGG: bxe:Bxe_B2092 hypothetical protein; hypothetical protein 1928680..1929063 Burkholderia phytofirmans PsJN 6284095 YP_001895334.1 CDS Bphyt_1702 NC_010681.1 1929200 1929637 R PFAM: response regulator receiver; KEGG: bcm:Bcenmc03_1106 response regulator receiver protein; response regulator receiver protein complement(1929200..1929637) Burkholderia phytofirmans PsJN 6284096 YP_001895335.1 CDS Bphyt_1703 NC_010681.1 1929767 1930501 R KEGG: mrd:Mrad2831_0709 transporter, YfdC-like protein; transporter complement(1929767..1930501) Burkholderia phytofirmans PsJN 6284327 YP_001895336.1 CDS Bphyt_1704 NC_010681.1 1930866 1931078 D hypothetical protein 1930866..1931078 Burkholderia phytofirmans PsJN 6284328 YP_001895337.1 CDS Bphyt_1705 NC_010681.1 1931071 1931445 R KEGG: bmu:Bmul_2000 hypothetical protein; hypothetical protein complement(1931071..1931445) Burkholderia phytofirmans PsJN 6284329 YP_001895338.1 CDS Bphyt_1706 NC_010681.1 1931551 1931847 R KEGG: bxe:Bxe_B2220 hypothetical protein; hypothetical protein complement(1931551..1931847) Burkholderia phytofirmans PsJN 6284330 YP_001895339.1 CDS Bphyt_1707 NC_010681.1 1932953 1935454 D KEGG: bxe:Bxe_A2540 3'-5' exoribonuclease, VacB and RNase II; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease B OB region domain; SMART: Cold shock protein; ribonuclease R 1932953..1935454 Burkholderia phytofirmans PsJN 6284296 YP_001895340.1 CDS Bphyt_1708 NC_010681.1 1935640 1936383 D TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: bxe:Bxe_A2539 RNA methyltransferase TrmH, group 3; RNA methyltransferase 1935640..1936383 Burkholderia phytofirmans PsJN 6284297 YP_001895341.1 CDS Bphyt_1709 NC_010681.1 1936465 1937160 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1936465..1937160 Burkholderia phytofirmans PsJN 6284298 YP_001895342.1 CDS Bphyt_1710 NC_010681.1 1937633 1938829 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2536 first mannosyl transferase,o-antigen biosynthesis; group 1 glycosyl transferase 1937633..1938829 Burkholderia phytofirmans PsJN 6284299 YP_001895343.1 CDS Bphyt_1711 NC_010681.1 1939027 1939326 D KEGG: bxe:Bxe_A2535 uncharacterized protein, YgjN-like; hypothetical protein 1939027..1939326 Burkholderia phytofirmans PsJN 6284300 YP_001895344.1 CDS Bphyt_1712 NC_010681.1 1939323 1939745 D KEGG: bxe:Bxe_A2534 HTH-type transcriptional regulator,YgjM-like; HTH-type transcriptional regulator,YgjM-like protein 1939323..1939745 Burkholderia phytofirmans PsJN 6282821 YP_001895345.1 CDS Bphyt_1713 NC_010681.1 1939953 1941350 R TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bxe:Bxe_A2531 undecaprenyl-phosphate galactosephosphotransferase; undecaprenyl-phosphate glucose phosphotransferase complement(1939953..1941350) Burkholderia phytofirmans PsJN 6282822 YP_001895346.1 CDS Bphyt_1714 NC_010681.1 1941387 1942121 R SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bxe:Bxe_A2530 Crp/Fnr family transcriptional regulator; Crp/Fnr family transcriptional regulator complement(1941387..1942121) Burkholderia phytofirmans PsJN 6282823 YP_001895347.1 CDS Bphyt_1715 NC_010681.1 1942751 1945399 R PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: bxe:Bxe_A2529 beta-mannosidase; family 2 glycoside hydrolase complement(1942751..1945399) Burkholderia phytofirmans PsJN 6282824 YP_001895348.1 CDS Bphyt_1716 NC_010681.1 1945440 1946522 R PFAM: Domain of unknown function DUF1839; KEGG: bxe:Bxe_A2528 hypothetical protein; hypothetical protein complement(1945440..1946522) Burkholderia phytofirmans PsJN 6282825 YP_001895349.1 CDS Bphyt_1717 NC_010681.1 1946519 1947583 R KEGG: bxe:Bxe_A2527 hypothetical protein; hypothetical protein complement(1946519..1947583) Burkholderia phytofirmans PsJN 6282826 YP_001895350.1 CDS Bphyt_1718 NC_010681.1 1947585 1948871 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A2526 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(1947585..1948871) Burkholderia phytofirmans PsJN 6282840 YP_001895351.1 CDS Bphyt_1719 NC_010681.1 1948868 1949119 R Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein complement(1948868..1949119) Burkholderia phytofirmans PsJN 6282841 YP_001895352.1 CDS Bphyt_1720 NC_010681.1 1949444 1949977 D KEGG: bxe:Bxe_A2524 GNAT family acetyltransferase; GNAT family acetyltransferase 1949444..1949977 Burkholderia phytofirmans PsJN 6282842 YP_001895353.1 CDS Bphyt_1721 NC_010681.1 1950418 1951251 D PFAM: methyltransferase type 11; KEGG: bxe:Bxe_A2515 SAM-dependent methyltransferase, SmtA; type 11 methyltransferase 1950418..1951251 Burkholderia phytofirmans PsJN 6282843 YP_001895354.1 CDS Bphyt_1722 NC_010681.1 1951355 1952572 D PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; KEGG: bxe:Bxe_A2514 mannose-1-phosphateguanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase (GDP) 1951355..1952572 Burkholderia phytofirmans PsJN 6282844 YP_001895355.1 CDS Bphyt_1723 NC_010681.1 1952547 1953137 D PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_A2513 PAH-inducible ring hydroxylating monooxygenase small subunit; flavin reductase domain-containing protein 1952547..1953137 Burkholderia phytofirmans PsJN 6282845 YP_001895356.1 CDS Bphyt_1724 NC_010681.1 1953137 1953382 D hypothetical protein 1953137..1953382 Burkholderia phytofirmans PsJN 6282846 YP_001895357.1 CDS Bphyt_1725 NC_010681.1 1953472 1954197 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_A2512 GntR family transcriptional regulator; GntR family transcriptional regulator 1953472..1954197 Burkholderia phytofirmans PsJN 6281296 YP_001895358.1 CDS Bphyt_1726 NC_010681.1 1954297 1955343 D PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bxe:Bxe_A2511 oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein 1954297..1955343 Burkholderia phytofirmans PsJN 6281297 YP_001895359.1 CDS Bphyt_1727 NC_010681.1 1955472 1956170 D KEGG: bxe:Bxe_A2510 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 1955472..1956170 Burkholderia phytofirmans PsJN 6281298 YP_001895360.1 CDS Bphyt_1728 NC_010681.1 1956189 1956848 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2509 ABC polar amino acid family transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(1956189..1956848) Burkholderia phytofirmans PsJN 6281299 YP_001895361.1 CDS Bphyt_1729 NC_010681.1 1956962 1957756 R PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bxe:Bxe_A2508 ABC polar amino acid family transporter periplasmic ligand binding protein; family 3 extracellular solute-binding protein complement(1956962..1957756) Burkholderia phytofirmans PsJN 6281300 YP_001895362.1 CDS Bphyt_1730 NC_010681.1 1957962 1959023 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(1957962..1959023) Burkholderia phytofirmans PsJN 6281301 YP_001895363.1 CDS Bphyt_1731 NC_010681.1 1959119 1959940 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1959119..1959940) Burkholderia phytofirmans PsJN 6281470 YP_001895364.1 CDS aat NC_010681.1 1960058 1960795 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(1960058..1960795) Burkholderia phytofirmans PsJN 6281471 YP_001895365.1 CDS Bphyt_1733 NC_010681.1 1960805 1961350 R PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A2504 ADP-ribose pyrophosphatase, NUDIX hydrolase, NudF; NUDIX hydrolase complement(1960805..1961350) Burkholderia phytofirmans PsJN 6281472 YP_001895366.1 CDS Bphyt_1734 NC_010681.1 1962030 1962527 D PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A2503 hypothetical protein; hypothetical protein 1962030..1962527 Burkholderia phytofirmans PsJN 6281474 YP_001895367.1 CDS Bphyt_1735 NC_010681.1 1962532 1962870 D PFAM: small multidrug resistance protein; KEGG: bxe:Bxe_A2502 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE; small multidrug resistance protein 1962532..1962870 Burkholderia phytofirmans PsJN 6284539 YP_001895368.1 CDS Bphyt_1736 NC_010681.1 1962902 1963297 R KEGG: bxe:Bxe_A2501 hypothetical protein; hypothetical protein complement(1962902..1963297) Burkholderia phytofirmans PsJN 6284540 YP_001895369.1 CDS Bphyt_1737 NC_010681.1 1963370 1963561 R KEGG: bxe:Bxe_A2500 hypothetical protein; hypothetical protein complement(1963370..1963561) Burkholderia phytofirmans PsJN 6284541 YP_001895370.1 CDS Bphyt_1738 NC_010681.1 1963849 1964127 D KEGG: bxe:Bxe_A2499 hypothetical protein; hypothetical protein 1963849..1964127 Burkholderia phytofirmans PsJN 6284542 YP_001895371.1 CDS Bphyt_1739 NC_010681.1 1964127 1964588 D KEGG: bxe:Bxe_A2498 hypothetical protein; hypothetical protein 1964127..1964588 Burkholderia phytofirmans PsJN 6284543 YP_001895372.1 CDS Bphyt_1740 NC_010681.1 1964979 1965977 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: bxe:Bxe_A2497 sugar dehydratase/epimerase; NAD-dependent epimerase/dehydratase complement(1964979..1965977) Burkholderia phytofirmans PsJN 6284544 YP_001895373.1 CDS Bphyt_1741 NC_010681.1 1966105 1967028 D PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A2496 TetR family transcriptional regulator; TetR family transcriptional regulator 1966105..1967028 Burkholderia phytofirmans PsJN 6284545 YP_001895374.1 CDS Bphyt_1742 NC_010681.1 1967075 1968199 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1967075..1968199 Burkholderia phytofirmans PsJN 6281357 YP_001895375.1 CDS Bphyt_1743 NC_010681.1 1968293 1968718 R KEGG: bxe:Bxe_A2494 transmembrane protein; transmembrane protein complement(1968293..1968718) Burkholderia phytofirmans PsJN 6281358 YP_001895376.1 CDS Bphyt_1744 NC_010681.1 1969223 1970383 D catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 1969223..1970383 Burkholderia phytofirmans PsJN 6281359 YP_001895377.1 CDS Bphyt_1745 NC_010681.1 1970435 1971277 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2492 ABC aliphatic sulfonates transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1970435..1971277 Burkholderia phytofirmans PsJN 6281360 YP_001895378.1 CDS Bphyt_1746 NC_010681.1 1971274 1972275 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A2491 ABC aliphatic sulfonates transporter ATPase; ABC transporter 1971274..1972275 Burkholderia phytofirmans PsJN 6281361 YP_001895379.1 CDS Bphyt_1747 NC_010681.1 1972324 1972539 D PFAM: TOBE domain protein; KEGG: bxe:Bxe_A2490 molybdenum-pterin binding protein; TOBE domain-containing protein 1972324..1972539 Burkholderia phytofirmans PsJN 6281362 YP_001895380.1 CDS Bphyt_1748 NC_010681.1 1972548 1972829 R hypothetical protein complement(1972548..1972829) Burkholderia phytofirmans PsJN 6283258 YP_001895381.1 CDS Bphyt_1749 NC_010681.1 1972961 1973176 D KEGG: bvi:Bcep1808_1530 hypothetical protein; hypothetical protein 1972961..1973176 Burkholderia phytofirmans PsJN 6283259 YP_001895382.1 CDS Bphyt_1750 NC_010681.1 1973302 1973574 D KEGG: bxe:Bxe_A2489 hypothetical protein; hypothetical protein 1973302..1973574 Burkholderia phytofirmans PsJN 6283260 YP_001895383.1 CDS Bphyt_1751 NC_010681.1 1973632 1974000 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mms:mma_1555 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1973632..1974000 Burkholderia phytofirmans PsJN 6283261 YP_001895384.1 CDS Bphyt_1752 NC_010681.1 1974149 1974415 R KEGG: bxe:Bxe_A2488 hypothetical protein; hypothetical protein complement(1974149..1974415) Burkholderia phytofirmans PsJN 6283262 YP_001895385.1 CDS Bphyt_1753 NC_010681.1 1974732 1974956 D KEGG: bxe:Bxe_A2487 hypothetical protein; hypothetical protein 1974732..1974956 Burkholderia phytofirmans PsJN 6283263 YP_001895386.1 CDS Bphyt_1754 NC_010681.1 1975047 1975292 D KEGG: bxe:Bxe_A2486 hypothetical protein; hypothetical protein 1975047..1975292 Burkholderia phytofirmans PsJN 6283264 YP_001895387.1 CDS Bphyt_1755 NC_010681.1 1975614 1976615 R TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase; KEGG: bxe:Bxe_A2485 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A complement(1975614..1976615) Burkholderia phytofirmans PsJN 6280916 YP_001895388.1 CDS Bphyt_1756 NC_010681.1 1976778 1977146 R KEGG: bxe:Bxe_A2484 glycine-rich protein; hypothetical protein complement(1976778..1977146) Burkholderia phytofirmans PsJN 6280917 YP_001895389.1 CDS Bphyt_1757 NC_010681.1 1977495 1979087 D PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: bxe:Bxe_A2482 sulfotransferase, TPR-domain protein; hypothetical protein 1977495..1979087 Burkholderia phytofirmans PsJN 6280918 YP_001895390.1 CDS Bphyt_1758 NC_010681.1 1979084 1979623 D PFAM: adenylylsulfate kinase; KEGG: bxe:Bxe_A2481 adenylylsulfate kinase; adenylylsulfate kinase 1979084..1979623 Burkholderia phytofirmans PsJN 6280919 YP_001895391.1 CDS Bphyt_1759 NC_010681.1 1979750 1980400 D PFAM: protein of unknown function UPF0126; KEGG: bch:Bcen2424_5168 protein of unknown function UPF0126; hypothetical protein 1979750..1980400 Burkholderia phytofirmans PsJN 6280825 YP_001895392.1 CDS Bphyt_1760 NC_010681.1 1980461 1980706 R KEGG: bxe:Bxe_A2480 hypothetical protein; hypothetical protein complement(1980461..1980706) Burkholderia phytofirmans PsJN 6280826 YP_001895393.1 CDS Bphyt_1761 NC_010681.1 1980913 1981125 R KEGG: bxe:Bxe_A2479 cytoplasmic protein; hypothetical protein complement(1980913..1981125) Burkholderia phytofirmans PsJN 6280827 YP_001895394.1 CDS Bphyt_1762 NC_010681.1 1981296 1982348 D PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A2478 oxidoreductase Tas, aldo/keto reductase family; aldo/keto reductase 1981296..1982348 Burkholderia phytofirmans PsJN 6280828 YP_001895395.1 CDS Bphyt_1763 NC_010681.1 1982487 1983770 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4727 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein complement(1982487..1983770) Burkholderia phytofirmans PsJN 6280829 YP_001895396.1 CDS Bphyt_1764 NC_010681.1 1983845 1985248 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bur:Bcep18194_A4728 hypothetical protein; hypothetical protein complement(1983845..1985248) Burkholderia phytofirmans PsJN 6280830 YP_001895397.1 CDS Bphyt_1765 NC_010681.1 1985481 1986443 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_1646 LysR family transcriptional regulator; LysR family transcriptional regulator 1985481..1986443 Burkholderia phytofirmans PsJN 6280831 YP_001895398.1 CDS Bphyt_1766 NC_010681.1 1986785 1987207 D KEGG: bxe:Bxe_A2477 hypothetical protein; hypothetical protein 1986785..1987207 Burkholderia phytofirmans PsJN 6282165 YP_001895399.1 CDS Bphyt_1767 NC_010681.1 1987294 1988121 R TIGRFAM: ABC transporter NodJ family; PFAM: ABC-2 type transporter; KEGG: bxe:Bxe_A2476 ABC lipooligosaccharide exporter, inner membrane subunit, NodJ family; sugar ABC transporter permease complement(1987294..1988121) Burkholderia phytofirmans PsJN 6282166 YP_001895400.1 CDS Bphyt_1768 NC_010681.1 1988224 1989138 R involved in the export of lipooligosaccharides during nodulation; nodulation ABC transporter NodI complement(1988224..1989138) Burkholderia phytofirmans PsJN 6282167 YP_001895401.1 CDS Bphyt_1769 NC_010681.1 1989448 1989912 D PFAM: UspA domain protein; KEGG: bxe:Bxe_A2474 universal stress protein, UspA; UspA domain-containing protein 1989448..1989912 Burkholderia phytofirmans PsJN 6282168 YP_001895402.1 CDS Bphyt_1770 NC_010681.1 1990072 1990734 R KEGG: bxe:Bxe_A2473 transmembrane protein; transmembrane protein complement(1990072..1990734) Burkholderia phytofirmans PsJN 6282169 YP_001895403.1 CDS Bphyt_1771 NC_010681.1 1990841 1991185 R KEGG: bxe:Bxe_A2472 hypothetical protein; hypothetical protein complement(1990841..1991185) Burkholderia phytofirmans PsJN 6282170 YP_001895404.1 CDS Bphyt_1772 NC_010681.1 1991280 1991930 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1991280..1991930) Burkholderia phytofirmans PsJN 6280959 YP_001895405.1 CDS Bphyt_1773 NC_010681.1 1992244 1993284 D TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A2470 ABC sulfate/thiosulfate transporter periplasmic ligand binding protein, CysP; sulfate ABC transporter substrate-binding protein 1992244..1993284 Burkholderia phytofirmans PsJN 6280960 YP_001895406.1 CDS Bphyt_1774 NC_010681.1 1993434 1994336 D TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysT; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2469 ABC sulfate/thiosulfate transporter inner membrane subunit, CysT; sulfate ABC transporter permease 1993434..1994336 Burkholderia phytofirmans PsJN 6280961 YP_001895407.1 CDS Bphyt_1775 NC_010681.1 1994333 1995385 D TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysW; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2468 ABC sulfate/thiosulfate transporter inner membrane subunit, CysW; sulfate ABC transporter permease 1994333..1995385 Burkholderia phytofirmans PsJN 6280962 YP_001895408.1 CDS Bphyt_1776 NC_010681.1 1995385 1996443 D KEGG: bxe:Bxe_A2467 ABC sulfate/thiosulfate transporter ATPase, CysA; TIGRFAM: sulfate ABC transporter ATPase; PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; sulfate ABC transporter ATPase 1995385..1996443 Burkholderia phytofirmans PsJN 6280963 YP_001895409.1 CDS Bphyt_1777 NC_010681.1 1996532 1997458 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2466 transcriptional regulator CysB-like protein; transcriptional regulator CysB-like protein 1996532..1997458 Burkholderia phytofirmans PsJN 6280964 YP_001895410.1 CDS Bphyt_1778 NC_010681.1 1997710 1998726 D TIGRFAM: L-asparaginase, type II; PFAM: asparaginase/glutaminase; KEGG: bxe:Bxe_A2464 L-asparaginase, type II; type II L-asparaginase 1997710..1998726 Burkholderia phytofirmans PsJN 6284624 YP_001895411.1 CDS Bphyt_1779 NC_010681.1 1998887 1999288 R KEGG: bxe:Bxe_A2463 hypothetical protein; hypothetical protein complement(1998887..1999288) Burkholderia phytofirmans PsJN 6284625 YP_001895412.1 CDS Bphyt_1780 NC_010681.1 1999845 2000753 R KEGG: bxe:Bxe_A2462 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase complement(1999845..2000753) Burkholderia phytofirmans PsJN 6284626 YP_001895413.1 CDS Bphyt_1781 NC_010681.1 2000849 2001658 R KEGG: bxe:Bxe_A2461 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: xylose isomerase; hydroxypyruvate isomerase complement(2000849..2001658) Burkholderia phytofirmans PsJN 6284627 YP_001895414.1 CDS Bphyt_1782 NC_010681.1 2001768 2003543 R catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase complement(2001768..2003543) Burkholderia phytofirmans PsJN 6284628 YP_001895415.1 CDS Bphyt_1783 NC_010681.1 2003850 2004764 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2459 LysR family transcriptional regulator; LysR family transcriptional regulator 2003850..2004764 Burkholderia phytofirmans PsJN 6284629 YP_001895416.1 CDS Bphyt_1784 NC_010681.1 2004910 2005644 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2004910..2005644 Burkholderia phytofirmans PsJN 6284630 YP_001895417.1 CDS Bphyt_1785 NC_010681.1 2005634 2006569 D KEGG: bxe:Bxe_A2457 predicted transmembrane transcriptional regulator (anti-sigma factor); transmembrane anti-sigma factor 2005634..2006569 Burkholderia phytofirmans PsJN 6283567 YP_001895418.1 CDS rpsF NC_010681.1 2006863 2007237 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2006863..2007237 Burkholderia phytofirmans PsJN 6283568 YP_001895419.1 CDS Bphyt_1787 NC_010681.1 2007289 2007588 D KEGG: bxe:Bxe_A2455 primosomal replication protein N, PriB; primosomal replication protein N, PriB 2007289..2007588 Burkholderia phytofirmans PsJN 6283569 YP_001895420.1 CDS rpsR NC_010681.1 2007591 2007866 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2007591..2007866 Burkholderia phytofirmans PsJN 6283570 YP_001895421.1 CDS Bphyt_1789 NC_010681.1 2007894 2008346 D PFAM: ribosomal protein L9; KEGG: bxe:Bxe_A2453 ribosomal protein L9; 50S ribosomal protein L9 2007894..2008346 Burkholderia phytofirmans PsJN 6283571 YP_001895422.1 CDS Bphyt_1790 NC_010681.1 2008491 2009876 D unwinds double stranded DNA; replicative DNA helicase 2008491..2009876 Burkholderia phytofirmans PsJN 6283572 YP_001895423.1 CDS Bphyt_1791 NC_010681.1 2010016 2010642 D PFAM: protein of unknown function DUF47; KEGG: bxe:Bxe_A2396 low-affinity phosphate transport accessory protein; hypothetical protein 2010016..2010642 Burkholderia phytofirmans PsJN 6282705 YP_001895424.1 CDS Bphyt_1792 NC_010681.1 2010642 2011652 D PFAM: phosphate transporter; KEGG: bxe:Bxe_A2395 phosphate transporter; phosphate transporter 2010642..2011652 Burkholderia phytofirmans PsJN 6282706 YP_001895425.1 CDS Bphyt_1793 NC_010681.1 2011711 2012517 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A2394 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2011711..2012517) Burkholderia phytofirmans PsJN 6282707 YP_001895426.1 CDS Bphyt_1794 NC_010681.1 2012858 2014114 R PFAM: NLP/P60 protein; KEGG: bxe:Bxe_A2393 transmembrane lipoprotein; NLP/P60 protein complement(2012858..2014114) Burkholderia phytofirmans PsJN 6282708 YP_001895427.1 CDS Bphyt_1795 NC_010681.1 2014322 2016172 R PFAM: PhoH family protein; SMART: nucleotide binding protein PINc; KEGG: bxe:Bxe_A2392 ATPase, PhoH-like protein; PhoH family protein complement(2014322..2016172) Burkholderia phytofirmans PsJN 6282709 YP_001895428.1 CDS Bphyt_1796 NC_010681.1 2016526 2016987 R PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bxe:Bxe_A2391 bacterioferritin comigratory oxidoreductase; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(2016526..2016987) Burkholderia phytofirmans PsJN 6282710 YP_001895429.1 CDS Bphyt_1797 NC_010681.1 2017131 2018024 R PFAM: polysaccharide deacetylase; KEGG: bxe:Bxe_A2390 polysaccharide deacetylase; polysaccharide deacetylase complement(2017131..2018024) Burkholderia phytofirmans PsJN 6282711 YP_001895430.1 CDS Bphyt_1798 NC_010681.1 2018035 2019081 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bxe:Bxe_A2389 hypothetical protein; NAD-dependent epimerase/dehydratase family protein complement(2018035..2019081) Burkholderia phytofirmans PsJN 6282134 YP_001895431.1 CDS Bphyt_1799 NC_010681.1 2019078 2020013 R PFAM: formyl transferase; KEGG: bxe:Bxe_A2388 hypothetical protein; formyltransferase complement(2019078..2020013) Burkholderia phytofirmans PsJN 6282135 YP_001895432.1 CDS Bphyt_1800 NC_010681.1 2020010 2021062 R PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A2387 polymixin resistance glycosyltransferase; family 2 glycosyl transferase complement(2020010..2021062) Burkholderia phytofirmans PsJN 6282136 YP_001895433.1 CDS Bphyt_1801 NC_010681.1 2021069 2022220 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bxe:Bxe_A2386 glutamine-scyllo-inositol transaminase, LPS biosynthesis-related; DegT/DnrJ/EryC1/StrS aminotransferase complement(2021069..2022220) Burkholderia phytofirmans PsJN 6282137 YP_001895434.1 CDS Bphyt_1802 NC_010681.1 2022468 2022839 R KEGG: bxe:Bxe_A2385 small multidrug resistance transmembrane protein, DMT superfamily; small multidrug resistance transmembrane protein, DMT superfamily complement(2022468..2022839) Burkholderia phytofirmans PsJN 6282138 YP_001895435.1 CDS Bphyt_1803 NC_010681.1 2022865 2024622 R PFAM: glycosyl transferase family 39; KEGG: bxe:Bxe_A2384 transmembrane protein; glycosyl transferase complement(2022865..2024622) Burkholderia phytofirmans PsJN 6282139 YP_001895436.1 CDS Bphyt_1804 NC_010681.1 2025026 2025400 R PFAM: protein of unknown function DUF498; KEGG: bxe:Bxe_A2383 hypothetical protein; hypothetical protein complement(2025026..2025400) Burkholderia phytofirmans PsJN 6283232 YP_001895437.1 CDS Bphyt_1805 NC_010681.1 2025806 2027056 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 2025806..2027056 Burkholderia phytofirmans PsJN 6283233 YP_001895438.1 CDS Bphyt_1806 NC_010681.1 2027155 2028486 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2027155..2028486 Burkholderia phytofirmans PsJN 6283234 YP_001895439.1 CDS Bphyt_1807 NC_010681.1 2028495 2029946 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2028495..2029946 Burkholderia phytofirmans PsJN 6283235 YP_001895440.1 CDS Bphyt_1808 NC_010681.1 2030241 2031530 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bxe:Bxe_A2379 molybdenum cofactor biosynthesis protein; molybdenum cofactor synthesis protein 2030241..2031530 Burkholderia phytofirmans PsJN 6283236 YP_001895441.1 CDS Bphyt_1809 NC_010681.1 2031561 2031818 D TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: bxe:Bxe_A2378 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 2031561..2031818 Burkholderia phytofirmans PsJN 6283237 YP_001895442.1 CDS Bphyt_1810 NC_010681.1 2031877 2032353 D PFAM: molybdopterin biosynthesis MoaE protein; KEGG: bxe:Bxe_A2377 molybdopterin synthase large subunit, MoaE; molybdopterin biosynthesis protein MoaE 2031877..2032353 Burkholderia phytofirmans PsJN 6283238 YP_001895443.1 CDS Bphyt_1811 NC_010681.1 2032515 2033207 R PFAM: globin; KEGG: bxe:Bxe_A2376 protein truncated hemoglobindomain-containing; globin complement(2032515..2033207) Burkholderia phytofirmans PsJN 6282654 YP_001895444.1 CDS Bphyt_1812 NC_010681.1 2033360 2033860 D TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: bxe:Bxe_A2375 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 2033360..2033860 Burkholderia phytofirmans PsJN 6282655 YP_001895445.1 CDS Bphyt_1813 NC_010681.1 2033979 2036576 D KEGG: bxe:Bxe_A2374 heat-shock protein, chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA; ATP-dependent chaperone ClpB 2033979..2036576 Burkholderia phytofirmans PsJN 6282656 YP_001895446.1 CDS Bphyt_1814 NC_010681.1 2036722 2037150 R PFAM: protein of unknown function DUF937; KEGG: bxe:Bxe_A2373 hypothetical protein; hypothetical protein complement(2036722..2037150) Burkholderia phytofirmans PsJN 6282657 YP_001895447.1 CDS Bphyt_1815 NC_010681.1 2037370 2037960 R KEGG: bxe:Bxe_A2372 DNA uptake protein, ComEA-like; DNA uptake protein, ComEA-like protein complement(2037370..2037960) Burkholderia phytofirmans PsJN 6282658 YP_001895448.1 CDS Bphyt_1816 NC_010681.1 2038283 2038777 D PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; KEGG: bxe:Bxe_A2371 MerR family transcriptional regulator; MerR family transcriptional regulator 2038283..2038777 Burkholderia phytofirmans PsJN 6282659 YP_001895449.1 CDS Bphyt_1817 NC_010681.1 2038729 2039187 D PFAM: carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_A2370 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 2038729..2039187 Burkholderia phytofirmans PsJN 6284216 YP_001895450.1 CDS Bphyt_1818 NC_010681.1 2039518 2040897 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bxe:Bxe_A2369 multi antimicrobial extrusion protein MatE family; MATE efflux family protein complement(2039518..2040897) Burkholderia phytofirmans PsJN 6284217 YP_001895451.1 CDS Bphyt_1819 NC_010681.1 2040900 2042705 R KEGG: bxe:Bxe_A2368 inner membrane protein; inner membrane protein complement(2040900..2042705) Burkholderia phytofirmans PsJN 6284218 YP_001895452.1 CDS rpmE2 NC_010681.1 2042952 2043218 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(2042952..2043218) Burkholderia phytofirmans PsJN 6284219 YP_001895453.1 CDS Bphyt_1821 NC_010681.1 2043454 2044290 R PFAM: protein of unknown function DUF980; KEGG: bxe:Bxe_A2366 inner membrane protein; hypothetical protein complement(2043454..2044290) Burkholderia phytofirmans PsJN 6284220 YP_001895454.1 CDS Bphyt_1822 NC_010681.1 2044306 2045862 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2365 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein complement(2044306..2045862) Burkholderia phytofirmans PsJN 6284221 YP_001895455.1 CDS Bphyt_1823 NC_010681.1 2045859 2046410 R PFAM: regulatory protein MerR; KEGG: bxe:Bxe_A2364 MerR family transcriptional regulator; MerR family transcriptional regulator complement(2045859..2046410) Burkholderia phytofirmans PsJN 6284031 YP_001895456.1 CDS rho NC_010681.1 2046634 2047902 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(2046634..2047902) Burkholderia phytofirmans PsJN 6284032 YP_001895457.1 CDS Bphyt_1825 NC_010681.1 2048137 2048463 R TIGRFAM: thioredoxin; PFAM: thioredoxin domain; KEGG: bxe:Bxe_A2362 thioredoxin; thioredoxin complement(2048137..2048463) Burkholderia phytofirmans PsJN 6284033 YP_001895458.1 CDS Bphyt_1826 NC_010681.1 2049245 2051926 D KEGG: bxe:Bxe_A2361 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III subunits gamma and tau; PFAM: ATPase AAA central domain protein; SMART: ATPase AAA; DNA polymerase III subunits gamma and tau 2049245..2051926 Burkholderia phytofirmans PsJN 6284034 YP_001895459.1 CDS Bphyt_1827 NC_010681.1 2051994 2052320 D PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A2360 hypothetical protein; hypothetical protein 2051994..2052320 Burkholderia phytofirmans PsJN 6284035 YP_001895460.1 CDS recR NC_010681.1 2052594 2053190 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 2052594..2053190 Burkholderia phytofirmans PsJN 6284036 YP_001895461.1 CDS Bphyt_1829 NC_010681.1 2053427 2054668 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A2358 conserved hypothetical protein, transmembrane, CaiB/BaiF family; L-carnitine dehydratase/bile acid-inducible protein F 2053427..2054668 Burkholderia phytofirmans PsJN 6284037 YP_001895462.1 CDS Bphyt_1830 NC_010681.1 2054851 2055888 D PFAM: NMT1/THI5 like domain protein; KEGG: bxe:Bxe_A2357 ABC nitrate/sulfonate/bicarbonate family transporter periplasmic ligand binding protein; NMT1/THI5 like domain-containing protein 2054851..2055888 Burkholderia phytofirmans PsJN 6283858 YP_001895463.1 CDS Bphyt_1831 NC_010681.1 2056013 2056825 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A2356 ABC nitrate/sulfonate/bicarbonate family transporter ATPase subunit; ABC transporter 2056013..2056825 Burkholderia phytofirmans PsJN 6283859 YP_001895464.1 CDS Bphyt_1832 NC_010681.1 2056901 2057725 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2355 ABC nitrate/sulfonate/bicarbonate family transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2056901..2057725 Burkholderia phytofirmans PsJN 6283860 YP_001895465.1 CDS Bphyt_1833 NC_010681.1 2057874 2058848 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_A2354 NADPH quinone oxidoreductase, zinc-containing; alcohol dehydrogenase zinc-binding domain-containing protein complement(2057874..2058848) Burkholderia phytofirmans PsJN 6283861 YP_001895466.1 CDS surE NC_010681.1 2059073 2059831 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 2059073..2059831 Burkholderia phytofirmans PsJN 6283862 YP_001895467.1 CDS Bphyt_1835 NC_010681.1 2059828 2060880 D KEGG: bxe:Bxe_A2352 protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 2059828..2060880 Burkholderia phytofirmans PsJN 6283863 YP_001895468.1 CDS Bphyt_1836 NC_010681.1 2060886 2061833 D PFAM: peptidoglycan-binding LysM; peptidase M23; KEGG: bxe:Bxe_A2351 lipoprotein/metalloendopeptidase; peptidase M23 2060886..2061833 Burkholderia phytofirmans PsJN 6281475 YP_001895469.1 CDS Bphyt_1837 NC_010681.1 2061845 2062927 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 2061845..2062927 Burkholderia phytofirmans PsJN 6281476 YP_001895470.1 CDS Bphyt_1838 NC_010681.1 2062932 2063708 D KEGG: bxe:Bxe_A2349 3'-5' exonuclease; 3'-5' exonuclease 2062932..2063708 Burkholderia phytofirmans PsJN 6281477 YP_001895471.1 CDS rumA NC_010681.1 2063931 2065349 D in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 2063931..2065349 Burkholderia phytofirmans PsJN 6281478 YP_001895472.1 CDS Bphyt_1840 NC_010681.1 2065490 2066350 R TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: bxe:Bxe_A2347 competence lipoprotein, ComL; outer membrane assembly lipoprotein YfiO complement(2065490..2066350) Burkholderia phytofirmans PsJN 6281479 YP_001895473.1 CDS Bphyt_1841 NC_010681.1 2066389 2067684 D KEGG: bxe:Bxe_A2346 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; pseudouridine synthase 2066389..2067684 Burkholderia phytofirmans PsJN 6281480 YP_001895474.1 CDS Bphyt_1842 NC_010681.1 2067681 2068538 D PFAM: protein of unknown function DUF152; KEGG: bxe:Bxe_A2345 protein of unknown function DUF152; hypothetical protein 2067681..2068538 Burkholderia phytofirmans PsJN 6281481 YP_001895475.1 CDS Bphyt_1843 NC_010681.1 2069177 2071006 D TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; poly-beta-hydroxybutyrate polymerase domain protein; KEGG: bxe:Bxe_A2343 poly(R)-hydroxyalkanoic acid synthase, class I; poly(R)-hydroxyalkanoic acid synthase 2069177..2071006 Burkholderia phytofirmans PsJN 6281776 YP_001895476.1 CDS Bphyt_1844 NC_010681.1 2071153 2072334 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 2071153..2072334 Burkholderia phytofirmans PsJN 6281777 YP_001895477.1 CDS Bphyt_1845 NC_010681.1 2072517 2073257 D catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; acetyacetyl-CoA reductase 2072517..2073257 Burkholderia phytofirmans PsJN 6281778 YP_001895478.1 CDS Bphyt_1846 NC_010681.1 2073389 2074018 D TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: bxe:Bxe_A2340 polyhydroxyalkanoate synthesis repressor PhaR; polyhydroxyalkonate synthesis repressor PhaR 2073389..2074018 Burkholderia phytofirmans PsJN 6281779 YP_001895479.1 CDS Bphyt_1847 NC_010681.1 2074297 2075319 D PFAM: dihydrouridine synthase; KEGG: bxe:Bxe_A2338 tRNA-dihydrouridine synthase C, DuS; dihydrouridine synthase 2074297..2075319 Burkholderia phytofirmans PsJN 6281780 YP_001895480.1 CDS Bphyt_1848 NC_010681.1 2075400 2076785 D KEGG: bxe:Bxe_A2337 conserved hypothetical protein 1125; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: radical SAM protein; protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 2075400..2076785 Burkholderia phytofirmans PsJN 6281781 YP_001895481.1 CDS Bphyt_1849 NC_010681.1 2076789 2077739 D PFAM: PfkB domain protein; KEGG: bxe:Bxe_A2336 sugar kinase, ribokinase family; PfkB domain-containing protein 2076789..2077739 Burkholderia phytofirmans PsJN 6281876 YP_001895482.1 CDS Bphyt_1850 NC_010681.1 2077808 2078992 D catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 2077808..2078992 Burkholderia phytofirmans PsJN 6281877 YP_001895483.1 CDS Bphyt_1851 NC_010681.1 2079042 2079698 D KEGG: bxe:Bxe_A2334 hypothetical protein; hypothetical protein 2079042..2079698 Burkholderia phytofirmans PsJN 6281878 YP_001895484.1 CDS Bphyt_1852 NC_010681.1 2079839 2081023 D catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 2079839..2081023 Burkholderia phytofirmans PsJN 6281879 YP_001895485.1 CDS Bphyt_1853 NC_010681.1 2081202 2081651 D KEGG: bxe:Bxe_A2332 hypothetical protein; hypothetical protein 2081202..2081651 Burkholderia phytofirmans PsJN 6281880 YP_001895486.1 CDS Bphyt_1854 NC_010681.1 2081703 2081834 D hypothetical protein 2081703..2081834 Burkholderia phytofirmans PsJN 6281881 YP_001895487.1 CDS Bphyt_1855 NC_010681.1 2081887 2082726 R KEGG: bxe:Bxe_A2331 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase type 3; phosphoserine phosphatase SerB complement(2081887..2082726) Burkholderia phytofirmans PsJN 6281882 YP_001895488.1 CDS Bphyt_1856 NC_010681.1 2083252 2084505 D PFAM: cytochrome P450; KEGG: bxe:Bxe_A2330 cytochrome P450 hydroxylase(monooxygenase); cytochrome P450 2083252..2084505 Burkholderia phytofirmans PsJN 6284472 YP_001895489.1 CDS Bphyt_1857 NC_010681.1 2084638 2085639 D TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bxe:Bxe_A2329 membrane protein, Ku-domain; Ku domain-containing protein 2084638..2085639 Burkholderia phytofirmans PsJN 6284473 YP_001895490.1 CDS Bphyt_1858 NC_010681.1 2085683 2088505 D TIGRFAM: DNA ligase D; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: bxe:Bxe_A2328 ATP-dependent DNA ligase; DNA ligase D 2085683..2088505 Burkholderia phytofirmans PsJN 6284474 YP_001895491.1 CDS Bphyt_1859 NC_010681.1 2088546 2088851 D KEGG: bxe:Bxe_A2327 hypothetical protein; hypothetical protein 2088546..2088851 Burkholderia phytofirmans PsJN 6284475 YP_001895492.1 CDS Bphyt_1860 NC_010681.1 2088891 2089847 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2326 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2088891..2089847) Burkholderia phytofirmans PsJN 6284476 YP_001895493.1 CDS Bphyt_1861 NC_010681.1 2090010 2091032 D TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_A2325 alginate lyase, zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase family protein 2090010..2091032 Burkholderia phytofirmans PsJN 6284477 YP_001895494.1 CDS Bphyt_1862 NC_010681.1 2091386 2091943 D KEGG: bxe:Bxe_A2324 hypothetical protein; hypothetical protein 2091386..2091943 Burkholderia phytofirmans PsJN 6284190 YP_001895495.1 CDS Bphyt_1863 NC_010681.1 2091982 2092788 R PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A2323 ABC transporter inner membrane subunit; hypothetical protein complement(2091982..2092788) Burkholderia phytofirmans PsJN 6284191 YP_001895496.1 CDS Bphyt_1864 NC_010681.1 2092785 2093513 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A2322 ABC transporter ATPase; ABC transporter complement(2092785..2093513) Burkholderia phytofirmans PsJN 6284192 YP_001895497.1 CDS Bphyt_1865 NC_010681.1 2093682 2096180 D PFAM: AsmA family protein; KEGG: bxe:Bxe_A2321 transmembrane protein, AsmA-like; AsmA family protein 2093682..2096180 Burkholderia phytofirmans PsJN 6284193 YP_001895498.1 CDS Bphyt_1866 NC_010681.1 2096180 2096347 D hypothetical protein 2096180..2096347 Burkholderia phytofirmans PsJN 6284194 YP_001895499.1 CDS Bphyt_1867 NC_010681.1 2096461 2096955 R KEGG: bxe:Bxe_A2320 hypothetical protein; hypothetical protein complement(2096461..2096955) Burkholderia phytofirmans PsJN 6284195 YP_001895500.1 CDS Bphyt_1868 NC_010681.1 2097355 2098974 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A2319 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2097355..2098974 Burkholderia phytofirmans PsJN 6284196 YP_001895501.1 CDS Bphyt_1869 NC_010681.1 2099054 2099563 D PFAM: response regulator receiver; KEGG: bxe:Bxe_A2318 response regulator receiver domain protein(CheY); response regulator receiver protein 2099054..2099563 Burkholderia phytofirmans PsJN 6284110 YP_001895502.1 CDS Bphyt_1870 NC_010681.1 2099645 2101618 D KEGG: bxe:Bxe_A2317 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 2099645..2101618 Burkholderia phytofirmans PsJN 6284111 YP_001895503.1 CDS mscL NC_010681.1 2101730 2102176 R homopentamer; channel that opens in response to pressure or hypoosmotic shock; large conductance mechanosensitive channel protein complement(2101730..2102176) Burkholderia phytofirmans PsJN 6284112 YP_001895504.1 CDS Bphyt_1872 NC_010681.1 2102266 2103300 R PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bxe:Bxe_A2315 amino-acid dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta complement(2102266..2103300) Burkholderia phytofirmans PsJN 6284113 YP_001895505.1 CDS Bphyt_1873 NC_010681.1 2103355 2104569 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase complement(2103355..2104569) Burkholderia phytofirmans PsJN 6284114 YP_001895506.1 CDS Bphyt_1874 NC_010681.1 2104724 2108206 R KEGG: bxe:Bxe_A2313 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase; SMART: DEAD-like helicases; transcription-repair coupling factor complement(2104724..2108206) Burkholderia phytofirmans PsJN 6284115 YP_001895507.1 CDS ispD NC_010681.1 2108328 2109044 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2108328..2109044 Burkholderia phytofirmans PsJN 6283397 YP_001895508.1 CDS ispF NC_010681.1 2109091 2109570 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 2109091..2109570 Burkholderia phytofirmans PsJN 6283398 YP_001895509.1 CDS Bphyt_1877 NC_010681.1 2109658 2110206 R PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bxe:Bxe_A2309 alkyl hydroperoxide reductase subunit C; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen complement(2109658..2110206) Burkholderia phytofirmans PsJN 6283399 YP_001895510.1 CDS Bphyt_1878 NC_010681.1 2110366 2111715 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A2308 oxidative stress resistance periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2110366..2111715) Burkholderia phytofirmans PsJN 6283400 YP_001895511.1 CDS ompR NC_010681.1 2111760 2112494 R part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator complement(2111760..2112494) Burkholderia phytofirmans PsJN 6283401 YP_001895512.1 CDS Bphyt_1880 NC_010681.1 2112724 2113053 D KEGG: bxe:Bxe_A2306 hypothetical protein; hypothetical protein 2112724..2113053 Burkholderia phytofirmans PsJN 6283402 YP_001895513.1 CDS Bphyt_1881 NC_010681.1 2113237 2114883 D PFAM: hypothetical protein; KEGG: bxe:Bxe_A2305 hypothetical protein; hypothetical protein 2113237..2114883 Burkholderia phytofirmans PsJN 6284301 YP_001895514.1 CDS Bphyt_1882 NC_010681.1 2114976 2116220 D PFAM: protein of unknown function DUF1501; KEGG: bxe:Bxe_A2304 protein of unknown function 1501; hypothetical protein 2114976..2116220 Burkholderia phytofirmans PsJN 6284302 YP_001895515.1 CDS Bphyt_1883 NC_010681.1 2116270 2117148 R PFAM: squalene/phytoene synthase; KEGG: bxe:Bxe_A2303 phytoene synthase; squalene/phytoene synthase complement(2116270..2117148) Burkholderia phytofirmans PsJN 6284303 YP_001895516.1 CDS Bphyt_1884 NC_010681.1 2117652 2118299 R KEGG: bxe:Bxe_B2662 hypothetical protein; hypothetical protein complement(2117652..2118299) Burkholderia phytofirmans PsJN 6284305 YP_001895517.1 CDS Bphyt_1885 NC_010681.1 2118395 2119009 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B2650 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2118395..2119009) Burkholderia phytofirmans PsJN 6284306 YP_001895518.1 CDS Bphyt_1886 NC_010681.1 2119095 2120237 D KEGG: bxe:Bxe_B2649 hypothetical protein; hypothetical protein 2119095..2120237 Burkholderia phytofirmans PsJN 6284746 YP_001895519.1 CDS Bphyt_1887 NC_010681.1 2120368 2121333 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0399 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2120368..2121333) Burkholderia phytofirmans PsJN 6284747 YP_001895520.1 CDS Bphyt_1888 NC_010681.1 2121472 2122176 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0400 short-chain dehydrogenase, oxidoreductase; short-chain dehydrogenase/reductase SDR 2121472..2122176 Burkholderia phytofirmans PsJN 6284748 YP_001895521.1 CDS Bphyt_1889 NC_010681.1 2122262 2122615 R PFAM: endoribonuclease L-PSP; KEGG: bxe:Bxe_B2710 endoribonuclease L-PSP; endoribonuclease L-PSP complement(2122262..2122615) Burkholderia phytofirmans PsJN 6284749 YP_001895522.1 CDS Bphyt_1890 NC_010681.1 2122689 2123861 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2709 hypothetical protein; FAD dependent oxidoreductase complement(2122689..2123861) Burkholderia phytofirmans PsJN 6284750 YP_001895523.1 CDS Bphyt_1891 NC_010681.1 2123854 2125260 R PFAM: glucose-inhibited division protein A; HI0933 family protein; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_B2708 opine oxidase subunit A; BFD (2Fe-2S)-binding domain-containing protein complement(2123854..2125260) Burkholderia phytofirmans PsJN 6284751 YP_001895524.1 CDS Bphyt_1892 NC_010681.1 2125250 2125630 R KEGG: bxe:Bxe_B2707 hypothetical protein; hypothetical protein complement(2125250..2125630) Burkholderia phytofirmans PsJN 6284403 YP_001895525.1 CDS Bphyt_1893 NC_010681.1 2125638 2126774 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2706 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2125638..2126774) Burkholderia phytofirmans PsJN 6284404 YP_001895526.1 CDS Bphyt_1894 NC_010681.1 2126771 2127568 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_B2705 ABC spermidine/putrescine family transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2126771..2127568) Burkholderia phytofirmans PsJN 6284405 YP_001895527.1 CDS Bphyt_1895 NC_010681.1 2127585 2128457 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_B2704 ABC spermidine/putrescine family transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2127585..2128457) Burkholderia phytofirmans PsJN 6284406 YP_001895528.1 CDS Bphyt_1896 NC_010681.1 2128444 2129523 R PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: bxe:Bxe_B2703 ABC spermidine/putrescine family transporter ATPase; ABC transporter complement(2128444..2129523) Burkholderia phytofirmans PsJN 6284407 YP_001895529.1 CDS Bphyt_1897 NC_010681.1 2129581 2130648 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2702 ABC spermidine/putrescine family transporter periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(2129581..2130648) Burkholderia phytofirmans PsJN 6284408 YP_001895530.1 CDS Bphyt_1898 NC_010681.1 2130806 2131774 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2701 LysR family transcriptional regulator; LysR family transcriptional regulator 2130806..2131774 Burkholderia phytofirmans PsJN 6284409 YP_001895531.1 CDS Bphyt_1899 NC_010681.1 2131868 2132548 D PFAM: phospholipase/carboxylesterase; KEGG: bxe:Bxe_B2197 carboxylesterase; carboxylesterase 2131868..2132548 Burkholderia phytofirmans PsJN 6283664 YP_001895532.1 CDS Bphyt_1900 NC_010681.1 2132577 2132864 R KEGG: bxe:Bxe_A2302 hypothetical protein; hypothetical protein complement(2132577..2132864) Burkholderia phytofirmans PsJN 6283665 YP_001895533.1 CDS Bphyt_1901 NC_010681.1 2133172 2136612 D KEGG: bch:Bcen2424_5173 membrane protein-like protein; hypothetical protein 2133172..2136612 Burkholderia phytofirmans PsJN 6283666 YP_001895534.1 CDS Bphyt_1902 NC_010681.1 2136609 2138189 D KEGG: bxe:Bxe_A2300 transmembrane protein; transmembrane protein 2136609..2138189 Burkholderia phytofirmans PsJN 6283667 YP_001895535.1 CDS Bphyt_1903 NC_010681.1 2138216 2138665 R PFAM: regulatory protein MarR; KEGG: bxe:Bxe_A2299 MarR family transcriptional regulator; MarR family transcriptional regulator complement(2138216..2138665) Burkholderia phytofirmans PsJN 6283668 YP_001895536.1 CDS Bphyt_1904 NC_010681.1 2138728 2139873 R PFAM: glycerate kinase; KEGG: bxe:Bxe_A2298 glycerate kinase; glycerate kinase complement(2138728..2139873) Burkholderia phytofirmans PsJN 6283669 YP_001895537.1 CDS tig NC_010681.1 2140457 2141803 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2140457..2141803 Burkholderia phytofirmans PsJN 6284617 YP_001895538.1 CDS clpP NC_010681.1 2141995 2142648 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2141995..2142648 Burkholderia phytofirmans PsJN 6284618 YP_001895539.1 CDS clpX NC_010681.1 2142832 2144103 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2142832..2144103 Burkholderia phytofirmans PsJN 6284619 YP_001895540.1 CDS Bphyt_1908 NC_010681.1 2144306 2146729 D KEGG: bxe:Bxe_A2293 peptidase S16, ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; ATP-dependent protease La 2144306..2146729 Burkholderia phytofirmans PsJN 6284620 YP_001895541.1 CDS Bphyt_1909 NC_010681.1 2147071 2147343 D PFAM: histone family protein DNA-binding protein; KEGG: bxe:Bxe_A2292 DNA-binding protein HU-alpha, HupA; histone family protein DNA-binding protein 2147071..2147343 Burkholderia phytofirmans PsJN 6284621 YP_001895542.1 CDS Bphyt_1910 NC_010681.1 2147709 2149646 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bxe:Bxe_A2291 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2147709..2149646 Burkholderia phytofirmans PsJN 6281302 YP_001895543.1 CDS Bphyt_1911 NC_010681.1 2149751 2150092 R KEGG: bxe:Bxe_A2290 hypothetical protein; hypothetical protein complement(2149751..2150092) Burkholderia phytofirmans PsJN 6281303 YP_001895544.1 CDS Bphyt_1912 NC_010681.1 2150210 2150884 R PFAM: lipolytic protein G-D-S-L family; KEGG: bxe:Bxe_A2289 arylesterase; arylesterase complement(2150210..2150884) Burkholderia phytofirmans PsJN 6281304 YP_001895545.1 CDS Bphyt_1913 NC_010681.1 2150913 2151599 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A2288 ABC transporter ATPase; ABC transporter 2150913..2151599 Burkholderia phytofirmans PsJN 6281305 YP_001895546.1 CDS Bphyt_1914 NC_010681.1 2151729 2153351 R PFAM: phosphoglucose isomerase (PGI); KEGG: bxe:Bxe_A2287 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase complement(2151729..2153351) Burkholderia phytofirmans PsJN 6281289 YP_001895547.1 CDS Bphyt_1915 NC_010681.1 2153586 2155175 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: bxe:Bxe_A2286 protein of unknown function UPF0031; carbohydrate kinase complement(2153586..2155175) Burkholderia phytofirmans PsJN 6281290 YP_001895548.1 CDS Bphyt_1916 NC_010681.1 2155295 2156593 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_A2285 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase complement(2155295..2156593) Burkholderia phytofirmans PsJN 6281291 YP_001895549.1 CDS Bphyt_1917 NC_010681.1 2157020 2161105 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 2157020..2161105 Burkholderia phytofirmans PsJN 6281292 YP_001895550.1 CDS Bphyt_1918 NC_010681.1 2161437 2161721 D SMART: helix-turn-helix domain protein; KEGG: bxe:Bxe_A2282 XRE family transcriptional regulator; XRE family transcriptional regulator 2161437..2161721 Burkholderia phytofirmans PsJN 6281293 YP_001895551.1 CDS Bphyt_1919 NC_010681.1 2161711 2163003 D TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bxe:Bxe_A2281 protein related to capsule biosynthesis enzymes, HipA-like; HipA N-terminal domain-containing protein 2161711..2163003 Burkholderia phytofirmans PsJN 6281294 YP_001895552.1 CDS Bphyt_1920 NC_010681.1 2163079 2163858 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bxe:Bxe_A2280 peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2163079..2163858) Burkholderia phytofirmans PsJN 6281295 YP_001895553.1 CDS Bphyt_1921 NC_010681.1 2163870 2164190 R PFAM: BolA family protein; KEGG: bxe:Bxe_A2279 stress-induced morphogene BolA-like protein; BolA family protein complement(2163870..2164190) Burkholderia phytofirmans PsJN 6283596 YP_001895554.1 CDS Bphyt_1922 NC_010681.1 2164192 2164722 R Involved in cell division; probably involved in intracellular septation; intracellular septation protein A complement(2164192..2164722) Burkholderia phytofirmans PsJN 6283597 YP_001895555.1 CDS Bphyt_1923 NC_010681.1 2164886 2165308 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(2164886..2165308) Burkholderia phytofirmans PsJN 6283598 YP_001895556.1 CDS Bphyt_1924 NC_010681.1 2165439 2166995 R PFAM: protein of unknown function UPF0061; KEGG: bxe:Bxe_A2276 hypothetical protein; hypothetical protein complement(2165439..2166995) Burkholderia phytofirmans PsJN 6283599 YP_001895557.1 CDS Bphyt_1925 NC_010681.1 2167189 2168874 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 2167189..2168874 Burkholderia phytofirmans PsJN 6283600 YP_001895558.1 CDS Bphyt_1926 NC_010681.1 2169035 2171119 D PFAM: enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_A2274 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase 2169035..2171119 Burkholderia phytofirmans PsJN 6283601 YP_001895559.1 CDS Bphyt_1927 NC_010681.1 2171208 2172386 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2171208..2172386 Burkholderia phytofirmans PsJN 6284321 YP_001895560.1 CDS Bphyt_1928 NC_010681.1 2172504 2173007 R SMART: Water stress and Hypersensitive response domain protein; KEGG: bxe:Bxe_A2272 lipoprotein; Water stress and Hypersensitive response domain-containing protein complement(2172504..2173007) Burkholderia phytofirmans PsJN 6284322 YP_001895561.1 CDS Bphyt_1929 NC_010681.1 2173078 2173452 R hypothetical protein complement(2173078..2173452) Burkholderia phytofirmans PsJN 6284323 YP_001895562.1 CDS Bphyt_1930 NC_010681.1 2173631 2175127 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: azo:azo3540 conserved hypothetical transcriptional regulatory protein; GntR family transcriptional regulator 2173631..2175127 Burkholderia phytofirmans PsJN 6284324 YP_001895563.1 CDS Bphyt_1931 NC_010681.1 2175376 2175765 D KEGG: bxe:Bxe_A2271 hypothetical protein; hypothetical protein 2175376..2175765 Burkholderia phytofirmans PsJN 6284325 YP_001895564.1 CDS Bphyt_1932 NC_010681.1 2176165 2176650 D PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A2270 phenylacetic acid degradation-related protein; thioesterase superfamily protein 2176165..2176650 Burkholderia phytofirmans PsJN 6284326 YP_001895565.1 CDS Bphyt_1933 NC_010681.1 2176764 2177762 D PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: bxe:Bxe_A2269 NADP-dependent oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 2176764..2177762 Burkholderia phytofirmans PsJN 6284135 YP_001895566.1 CDS Bphyt_1934 NC_010681.1 2177821 2178723 D probable dehydrogenase; hypothetical protein 2177821..2178723 Burkholderia phytofirmans PsJN 6284136 YP_001895567.1 CDS Bphyt_1935 NC_010681.1 2178807 2179766 D PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: bxe:Bxe_A2267 esterase/lipase; alpha/beta hydrolase 2178807..2179766 Burkholderia phytofirmans PsJN 6284137 YP_001895568.1 CDS Bphyt_1936 NC_010681.1 2179855 2180712 R PFAM: protein of unknown function DUF833; KEGG: bxe:Bxe_A2266 signal peptide protein; hypothetical protein complement(2179855..2180712) Burkholderia phytofirmans PsJN 6284138 YP_001895569.1 CDS Bphyt_1937 NC_010681.1 2180802 2181875 R TIGRFAM: folate-binding protein YgfZ; KEGG: bxe:Bxe_A2265 glycine cleavage T protein (aminomethyltransferase); folate-binding protein YgfZ complement(2180802..2181875) Burkholderia phytofirmans PsJN 6284139 YP_001895570.1 CDS Bphyt_1938 NC_010681.1 2181927 2182964 D PFAM: aminodeoxychorismate lyase; KEGG: bxe:Bxe_A2264 protein of unknown function DUF175; aminodeoxychorismate lyase 2181927..2182964 Burkholderia phytofirmans PsJN 6284140 YP_001895571.1 CDS tmk NC_010681.1 2182964 2183584 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2182964..2183584 Burkholderia phytofirmans PsJN 6284141 YP_001895572.1 CDS Bphyt_1940 NC_010681.1 2183679 2184713 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the subunit beta on the DNA; DNA polymerase III subunit delta' 2183679..2184713 Burkholderia phytofirmans PsJN 6282398 YP_001895573.1 CDS Bphyt_1941 NC_010681.1 2184834 2185358 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A2261 phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 2184834..2185358 Burkholderia phytofirmans PsJN 6282399 YP_001895574.1 CDS Bphyt_1942 NC_010681.1 2185393 2186184 D TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: bxe:Bxe_A2260 TatD-related deoxyribonuclease; TatD family hydrolase 2185393..2186184 Burkholderia phytofirmans PsJN 6282400 YP_001895575.1 CDS Bphyt_1943 NC_010681.1 2186252 2186977 D PFAM: ankyrin; KEGG: bxe:Bxe_A2259 ankyrin repeat harboring signal peptide protein; ankyrin 2186252..2186977 Burkholderia phytofirmans PsJN 6282401 YP_001895576.1 CDS Bphyt_1944 NC_010681.1 2187354 2187710 D KEGG: bxe:Bxe_A2258 hypothetical protein; hypothetical protein 2187354..2187710 Burkholderia phytofirmans PsJN 6282402 YP_001895577.1 CDS Bphyt_1945 NC_010681.1 2188114 2189337 D PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_A2257 small-conductance mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2188114..2189337 Burkholderia phytofirmans PsJN 6282403 YP_001895578.1 CDS Bphyt_1946 NC_010681.1 2189548 2190960 D KEGG: bxe:Bxe_A2256 alpha,alpha-trehalose-phosphate synthase(UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase 2189548..2190960 Burkholderia phytofirmans PsJN 6284271 YP_001895579.1 CDS Bphyt_1947 NC_010681.1 2191076 2192242 D KEGG: bxe:Bxe_A2255 predicted ATPase, RecF-like; RecF-like ATPase 2191076..2192242 Burkholderia phytofirmans PsJN 6284272 YP_001895580.1 CDS Bphyt_1948 NC_010681.1 2192474 2193541 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2254 sugar transferase, glycosyltransferase, group 1; group 1 glycosyl transferase 2192474..2193541 Burkholderia phytofirmans PsJN 6284273 YP_001895581.1 CDS Bphyt_1949 NC_010681.1 2193849 2194436 R KEGG: bxe:Bxe_A2253 lipoprotein; lipoprotein complement(2193849..2194436) Burkholderia phytofirmans PsJN 6284274 YP_001895582.1 CDS Bphyt_1950 NC_010681.1 2194875 2195324 R KEGG: bxe:Bxe_A2252 transmembrane protein; transmembrane protein complement(2194875..2195324) Burkholderia phytofirmans PsJN 6284275 YP_001895583.1 CDS Bphyt_1951 NC_010681.1 2195560 2195859 R PFAM: PsiF repeat protein; KEGG: bxe:Bxe_A2251 phosphate starvation-inducible protein, PsiF; PsiF repeat-containing protein complement(2195560..2195859) Burkholderia phytofirmans PsJN 6284276 YP_001895584.1 CDS Bphyt_1952 NC_010681.1 2196306 2196602 D unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 2196306..2196602 Burkholderia phytofirmans PsJN 6284277 YP_001895585.1 CDS Bphyt_1953 NC_010681.1 2197197 2198372 D KEGG: bxe:Bxe_A2249 transposase A-like protein; transposase A-like protein 2197197..2198372 Burkholderia phytofirmans PsJN 6281744 YP_001895586.1 CDS Bphyt_1954 NC_010681.1 2198514 2200067 R KEGG: bxe:Bxe_A2248 mannose-1-phosphateguanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(2198514..2200067) Burkholderia phytofirmans PsJN 6281745 YP_001895587.1 CDS Bphyt_1955 NC_010681.1 2200703 2202100 D TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: bxe:Bxe_A2246 undecaprenyl-phosphate galactosephosphotransferase; undecaprenyl-phosphate glucose phosphotransferase 2200703..2202100 Burkholderia phytofirmans PsJN 6281746 YP_001895588.1 CDS Bphyt_1956 NC_010681.1 2202236 2203684 D TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bxe:Bxe_A2245 UDP-glucose 6-dehydrogenase; nucleotide sugar dehydrogenase 2202236..2203684 Burkholderia phytofirmans PsJN 6281747 YP_001895589.1 CDS Bphyt_1957 NC_010681.1 2203728 2204183 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bxe:Bxe_A2244 low molecular weight protein-tyrosine-phosphatase, EpsP; protein tyrosine phosphatase 2203728..2204183 Burkholderia phytofirmans PsJN 6281748 YP_001895590.1 CDS Bphyt_1958 NC_010681.1 2204183 2205406 D PFAM: polysaccharide export protein; KEGG: bxe:Bxe_A2243 polysaccharide (EPS I) exporter, outer membrane auxiliary (OMA) protein family; polysaccharide export protein 2204183..2205406 Burkholderia phytofirmans PsJN 6281749 YP_001895591.1 CDS Bphyt_1959 NC_010681.1 2205542 2207740 D KEGG: bxe:Bxe_A2242 protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein 2205542..2207740 Burkholderia phytofirmans PsJN 6284779 YP_001895592.1 CDS Bphyt_1960 NC_010681.1 2207802 2208734 D PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A2241 glycosyl transferase, family 2, involved in cell wall biogenesis; family 2 glycosyl transferase 2207802..2208734 Burkholderia phytofirmans PsJN 6284780 YP_001895593.1 CDS Bphyt_1961 NC_010681.1 2208841 2210019 D KEGG: bxe:Bxe_A2240 glycosyltransferase group 1, RfaG-like; glycosyl transferase 2208841..2210019 Burkholderia phytofirmans PsJN 6284781 YP_001895594.1 CDS Bphyt_1962 NC_010681.1 2210023 2211504 D KEGG: bxe:Bxe_A2239 transmembrane protein; transmembrane protein 2210023..2211504 Burkholderia phytofirmans PsJN 6284782 YP_001895595.1 CDS Bphyt_1963 NC_010681.1 2211501 2212730 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2238 glycosyl transferase, group 1; group 1 glycosyl transferase 2211501..2212730 Burkholderia phytofirmans PsJN 6284783 YP_001895596.1 CDS Bphyt_1964 NC_010681.1 2212810 2213976 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2237 predicted glycosyl transferase, group 1; group 1 glycosyl transferase 2212810..2213976 Burkholderia phytofirmans PsJN 6284784 YP_001895597.1 CDS Bphyt_1965 NC_010681.1 2214106 2215149 R TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_A2234 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase complement(2214106..2215149) Burkholderia phytofirmans PsJN 6284785 YP_001895598.1 CDS Bphyt_1966 NC_010681.1 2215191 2215928 R PFAM: lipolytic protein G-D-S-L family; KEGG: bxe:Bxe_A2233 hypothetical protein; G-D-S-L family lipolytic protein complement(2215191..2215928) Burkholderia phytofirmans PsJN 6281181 YP_001895599.1 CDS Bphyt_1967 NC_010681.1 2215925 2217031 R PFAM: acyltransferase 3; KEGG: bxe:Bxe_A2232 membrane-located cell surface O-antigen acetylase; acyltransferase 3 complement(2215925..2217031) Burkholderia phytofirmans PsJN 6281182 YP_001895600.1 CDS Bphyt_1968 NC_010681.1 2217698 2219899 D KEGG: bxe:Bxe_A2230 hypothetical protein; hypothetical protein 2217698..2219899 Burkholderia phytofirmans PsJN 6281183 YP_001895601.1 CDS Bphyt_1969 NC_010681.1 2219973 2221439 D PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: bxe:Bxe_A2229 polysaccharide transporter (PST) family; polysaccharide biosynthesis protein 2219973..2221439 Burkholderia phytofirmans PsJN 6281184 YP_001895602.1 CDS Bphyt_1970 NC_010681.1 2221436 2223892 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2228 first mannosyl transferase, WbaZ; group 1 glycosyl transferase 2221436..2223892 Burkholderia phytofirmans PsJN 6281185 YP_001895603.1 CDS Bphyt_1971 NC_010681.1 2224009 2225220 R PFAM: acyltransferase 3; KEGG: bxe:Bxe_A2227 lipopolysaccharide biosynthesis-related membrane protein; acyltransferase 3 complement(2224009..2225220) Burkholderia phytofirmans PsJN 6281186 YP_001895604.1 CDS Bphyt_1972 NC_010681.1 2225480 2225623 D KEGG: bxe:Bxe_A2226 hypothetical protein; hypothetical protein 2225480..2225623 Burkholderia phytofirmans PsJN 6281686 YP_001895605.1 CDS Bphyt_1973 NC_010681.1 2225931 2226848 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: bxe:Bxe_A2225 UTP--glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 2225931..2226848 Burkholderia phytofirmans PsJN 6281687 YP_001895606.1 CDS Bphyt_1974 NC_010681.1 2227210 2227791 D KEGG: bps:BPSL0554 hypothetical protein; hypothetical protein 2227210..2227791 Burkholderia phytofirmans PsJN 6281688 YP_001895607.1 CDS Bphyt_1975 NC_010681.1 2227794 2228591 D KEGG: pfo:Pfl_3818 hypothetical protein; hypothetical protein 2227794..2228591 Burkholderia phytofirmans PsJN 6281689 YP_001895608.1 CDS Bphyt_1976 NC_010681.1 2228597 2228821 D KEGG: bvi:Bcep1808_0019 hypothetical protein; hypothetical protein 2228597..2228821 Burkholderia phytofirmans PsJN 6281690 YP_001895609.1 CDS Bphyt_1977 NC_010681.1 2228975 2231149 R catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G complement(2228975..2231149) Burkholderia phytofirmans PsJN 6281691 YP_001895610.1 CDS Bphyt_1978 NC_010681.1 2231271 2231675 R PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A2222 conserved protein possibly involved in utilization of glycolate; hypothetical protein complement(2231271..2231675) Burkholderia phytofirmans PsJN 6281692 YP_001895611.1 CDS Bphyt_1980 NC_010681.1 2232076 2232951 D PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: bxe:Bxe_A2217 hypothetical iron-sulfur binding protein, MOSC domain protein; MOSC domain-containing protein beta barrel domain-containing protein 2232076..2232951 Burkholderia phytofirmans PsJN 6283768 YP_001895612.1 CDS Bphyt_1981 NC_010681.1 2233050 2233229 R KEGG: bxe:Bxe_A2216 response regulator receiver domain protein(CheY); response regulator receiver domain-containing protein(CheY) complement(2233050..2233229) Burkholderia phytofirmans PsJN 6283769 YP_001895613.1 CDS Bphyt_1982 NC_010681.1 2233294 2234109 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bxe:Bxe_A2215 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase complement(2233294..2234109) Burkholderia phytofirmans PsJN 6283770 YP_001895614.1 CDS Bphyt_1983 NC_010681.1 2234815 2237355 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_A2214 NAD(P)H-dependent nitrite reductase, large subunit; nitrite reductase (NAD(P)H) large subunit 2234815..2237355 Burkholderia phytofirmans PsJN 6283771 YP_001895615.1 CDS Bphyt_1984 NC_010681.1 2237388 2237741 D TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: bxe:Bxe_A2213 ferredoxin subunit of nitrate/nitrite reductase (NADPH); nitrite reductase (NAD(P)H) small subunit 2237388..2237741 Burkholderia phytofirmans PsJN 6283772 YP_001895616.1 CDS Bphyt_1985 NC_010681.1 2237776 2241987 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; flavodoxin/nitric oxide synthase; KEGG: bxe:Bxe_A2212 assimilatory nitrate reductase/sulfite reductase, NasA/NapA/NarB/FdhF; molybdopterin oxidoreductase 2237776..2241987 Burkholderia phytofirmans PsJN 6282899 YP_001895617.1 CDS Bphyt_1986 NC_010681.1 2242187 2243554 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2211 major facilitator superfamily (MFS)nitrate/nitrite transporter NarK/NasA family; major facilitator superfamily protein 2242187..2243554 Burkholderia phytofirmans PsJN 6282900 YP_001895618.1 CDS Bphyt_1987 NC_010681.1 2243674 2244348 D KEGG: bxe:Bxe_A2210 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2243674..2244348 Burkholderia phytofirmans PsJN 6282901 YP_001895619.1 CDS Bphyt_1988 NC_010681.1 2244409 2244897 D PFAM: MgtC/SapB transporter; KEGG: bxe:Bxe_A2209 Mg++ transporter MgtC/SapB family; MgtC/SapB transporter 2244409..2244897 Burkholderia phytofirmans PsJN 6282902 YP_001895620.1 CDS Bphyt_1989 NC_010681.1 2245041 2246198 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1699 outer membrane porin, OmpC family; porin complement(2245041..2246198) Burkholderia phytofirmans PsJN 6282903 YP_001895621.1 CDS Bphyt_1990 NC_010681.1 2246484 2247929 D PFAM: aldehyde dehydrogenase_; KEGG: bur:Bcep18194_B2835 aldehyde dehydrogenase; aldehyde dehydrogenase 2246484..2247929 Burkholderia phytofirmans PsJN 6282904 YP_001895622.1 CDS Bphyt_1991 NC_010681.1 2248083 2249405 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2836 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein 2248083..2249405 Burkholderia phytofirmans PsJN 6284058 YP_001895623.1 CDS Bphyt_1992 NC_010681.1 2249406 2250623 D PFAM: mandelate racemase/muconate lactonizing protein; KEGG: bur:Bcep18194_B2837 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 2249406..2250623 Burkholderia phytofirmans PsJN 6284059 YP_001895624.1 CDS Bphyt_1993 NC_010681.1 2250694 2252355 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_B2838 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 2250694..2252355 Burkholderia phytofirmans PsJN 6284060 YP_001895625.1 CDS Bphyt_1994 NC_010681.1 2252382 2253317 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2834 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2252382..2253317) Burkholderia phytofirmans PsJN 6284061 YP_001895626.1 CDS Bphyt_1995 NC_010681.1 2253435 2254913 R PFAM: aldehyde dehydrogenase_; KEGG: pae:PA4073 probable aldehyde dehydrogenase; aldehyde dehydrogenase complement(2253435..2254913) Burkholderia phytofirmans PsJN 6284062 YP_001895627.1 CDS Bphyt_1996 NC_010681.1 2254951 2255898 R KEGG: ret:RHE_CH02708 hypothetical protein; hypothetical protein complement(2254951..2255898) Burkholderia phytofirmans PsJN 6284063 YP_001895628.1 CDS tynA NC_010681.1 2255939 2257924 R catalyzes the formation of phenylacetaldehyde from 2-phenylethylamine; tyramine oxidase complement(2255939..2257924) Burkholderia phytofirmans PsJN 6284064 YP_001895629.1 CDS Bphyt_1998 NC_010681.1 2258123 2259127 D SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL3039 AraC family transcriptional regulator; AraC family transcriptional regulator 2258123..2259127 Burkholderia phytofirmans PsJN 6282322 YP_001895630.1 CDS Bphyt_1999 NC_010681.1 2259390 2260841 D PFAM: amino acid permease-associated region; KEGG: rle:RL3038 transmembrane permease; amino acid permease-associated protein 2259390..2260841 Burkholderia phytofirmans PsJN 6282323 YP_001895631.1 CDS Bphyt_2000 NC_010681.1 2260919 2262133 D PFAM: porin Gram-negative type; KEGG: bmu:Bmul_3587 outer membrane porin OpcP; porin 2260919..2262133 Burkholderia phytofirmans PsJN 6282324 YP_001895632.1 CDS Bphyt_2001 NC_010681.1 2262136 2263032 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B2806 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2262136..2263032) Burkholderia phytofirmans PsJN 6282325 YP_001895633.1 CDS Bphyt_2002 NC_010681.1 2263178 2263954 D PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bxe:Bxe_A2203 trans-aconitate 2-methyltransferase; trans-aconitate 2-methyltransferase 2263178..2263954 Burkholderia phytofirmans PsJN 6282326 YP_001895634.1 CDS Bphyt_2003 NC_010681.1 2264141 2264506 D KEGG: bte:BTH_I2919 hypothetical protein; hypothetical protein 2264141..2264506 Burkholderia phytofirmans PsJN 6282327 YP_001895635.1 CDS Bphyt_2004 NC_010681.1 2264621 2265268 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bcm:Bcenmc03_6417 GntR family transcriptional regulator; GntR family transcriptional regulator complement(2264621..2265268) Burkholderia phytofirmans PsJN 6284559 YP_001895636.1 CDS Bphyt_2005 NC_010681.1 2265328 2266692 R PFAM: aminotransferase class-III; KEGG: bte:BTH_II2249 glutamate-1-semialdehyde aminotransferase; aminotransferase complement(2265328..2266692) Burkholderia phytofirmans PsJN 6284560 YP_001895637.1 CDS Bphyt_2006 NC_010681.1 2266768 2268117 R PFAM: glutamine synthetase; KEGG: bcm:Bcenmc03_6419 glutamate--putrescine ligase; glutamate--putrescine ligase complement(2266768..2268117) Burkholderia phytofirmans PsJN 6284561 YP_001895638.1 CDS Bphyt_2007 NC_010681.1 2268317 2269147 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A2202 short chain dehydrogenase; short chain dehydrogenase complement(2268317..2269147) Burkholderia phytofirmans PsJN 6284562 YP_001895639.1 CDS Bphyt_2008 NC_010681.1 2269366 2270313 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator; KEGG: bxe:Bxe_A2201 AraC family transcriptional regulator; AraC family transcriptional regulator 2269366..2270313 Burkholderia phytofirmans PsJN 6284563 YP_001895640.1 CDS Bphyt_2009 NC_010681.1 2270388 2271011 D PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A2200 glutathione S-transferase-like protein; glutathione S-transferase 2270388..2271011 Burkholderia phytofirmans PsJN 6284564 YP_001895641.1 CDS Bphyt_2010 NC_010681.1 2271151 2271495 D KEGG: bxe:Bxe_A2199 hypothetical protein; hypothetical protein 2271151..2271495 Burkholderia phytofirmans PsJN 6284565 YP_001895642.1 CDS Bphyt_2011 NC_010681.1 2271621 2272262 D PFAM: regulatory protein TetR; KEGG: bch:Bcen2424_4865 TetR family transcriptional regulator; TetR family transcriptional regulator 2271621..2272262 Burkholderia phytofirmans PsJN 6281065 YP_001895643.1 CDS Bphyt_2012 NC_010681.1 2272307 2273503 R enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase complement(2272307..2273503) Burkholderia phytofirmans PsJN 6281066 YP_001895644.1 CDS Bphyt_2013 NC_010681.1 2273686 2276190 D PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bxe:Bxe_A2197 penicillin-binding 1 (peptidoglycansynthetase) transmembrane protein, MrcA; peptidoglycan glycosyltransferase 2273686..2276190 Burkholderia phytofirmans PsJN 6281067 YP_001895645.1 CDS Bphyt_2014 NC_010681.1 2276392 2277744 R PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3117 transporter (MFS superfamily); major facilitator superfamily protein complement(2276392..2277744) Burkholderia phytofirmans PsJN 6281068 YP_001895646.1 CDS Bphyt_2015 NC_010681.1 2277862 2279733 R PFAM: glycoside hydrolase 15-related; KEGG: bxe:Bxe_A2196 glycoside hydrolase, family 15; glycoside hydrolase 15-like protein complement(2277862..2279733) Burkholderia phytofirmans PsJN 6281069 YP_001895647.1 CDS Bphyt_2016 NC_010681.1 2279934 2280305 D KEGG: bxe:Bxe_A2195 hypothetical protein; hypothetical protein 2279934..2280305 Burkholderia phytofirmans PsJN 6281070 YP_001895648.1 CDS Bphyt_2017 NC_010681.1 2280419 2280850 R PFAM: cupin; KEGG: bxe:Bxe_B1425 hypothetical protein; cupin complement(2280419..2280850) Burkholderia phytofirmans PsJN 6284637 YP_001895649.1 CDS Bphyt_2018 NC_010681.1 2280847 2281530 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bxe:Bxe_B1426 (acyl-carrier protein) phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(2280847..2281530) Burkholderia phytofirmans PsJN 6284638 YP_001895650.1 CDS Bphyt_2019 NC_010681.1 2281766 2282203 D PFAM: regulatory protein MarR; KEGG: bur:Bcep18194_A4687 hypothetical protein; MarR family transcriptional regulator 2281766..2282203 Burkholderia phytofirmans PsJN 6284639 YP_001895651.1 CDS Bphyt_2020 NC_010681.1 2282274 2283788 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_C6204 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 2282274..2283788 Burkholderia phytofirmans PsJN 6284640 YP_001895652.1 CDS Bphyt_2021 NC_010681.1 2283831 2285072 D PFAM: secretion protein HlyD; KEGG: bxe:Bxe_A3583 MFS efflux pump, membrane fusion protein, EmrA subfamily; secretion protein HlyD 2283831..2285072 Burkholderia phytofirmans PsJN 6284641 YP_001895653.1 CDS Bphyt_2022 NC_010681.1 2285155 2286717 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5791 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 2285155..2286717 Burkholderia phytofirmans PsJN 6284642 YP_001895654.1 CDS Bphyt_2023 NC_010681.1 2287092 2287283 D KEGG: bcm:Bcenmc03_5309 hypothetical protein; hypothetical protein 2287092..2287283 Burkholderia phytofirmans PsJN 6284643 YP_001895655.1 CDS Bphyt_2024 NC_010681.1 2287415 2288110 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bxe:Bxe_B3003 metal dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(2287415..2288110) Burkholderia phytofirmans PsJN 6282585 YP_001895656.1 CDS Bphyt_2025 NC_010681.1 2288534 2289400 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B1317 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2288534..2289400 Burkholderia phytofirmans PsJN 6282586 YP_001895657.1 CDS Bphyt_2026 NC_010681.1 2289551 2290591 D TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C class I; KEGG: bxe:Bxe_C0079 cytochrome C oxidase subunit II; cytochrome C oxidase subunit II 2289551..2290591 Burkholderia phytofirmans PsJN 6282587 YP_001895658.1 CDS Bphyt_2027 NC_010681.1 2290624 2292660 D KEGG: bxe:Bxe_C0080 cytochrome C oxidase subunit I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome C oxidase subunit I 2290624..2292660 Burkholderia phytofirmans PsJN 6282588 YP_001895659.1 CDS Bphyt_2028 NC_010681.1 2292662 2293306 D PFAM: cytochrome C oxidase subunit III; KEGG: bxe:Bxe_A2185 cytochrome C oxidase subunit III; cytochrome C oxidase subunit III 2292662..2293306 Burkholderia phytofirmans PsJN 6282589 YP_001895660.1 CDS Bphyt_2029 NC_010681.1 2293291 2293734 D KEGG: bxe:Bxe_C0082 hypothetical protein; hypothetical protein 2293291..2293734 Burkholderia phytofirmans PsJN 6282590 YP_001895661.1 CDS Bphyt_2030 NC_010681.1 2293833 2295134 D PFAM: cytochrome C class I; KEGG: bxe:Bxe_C0083 alcohol dehydrogenase cytochrome C subunit; gluconate 2-dehydrogenase 2293833..2295134 Burkholderia phytofirmans PsJN 6283378 YP_001895662.1 CDS Bphyt_2031 NC_010681.1 2295197 2295415 R hypothetical protein complement(2295197..2295415) Burkholderia phytofirmans PsJN 6283379 YP_001895663.1 CDS Bphyt_2032 NC_010681.1 2295470 2297311 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_A1836 pyruvate decarboxylase; thiamine pyrophosphate protein complement(2295470..2297311) Burkholderia phytofirmans PsJN 6283380 YP_001895664.1 CDS Bphyt_2033 NC_010681.1 2297497 2298561 R KEGG: bcm:Bcenmc03_5956 hypothetical protein; hypothetical protein complement(2297497..2298561) Burkholderia phytofirmans PsJN 6283381 YP_001895665.1 CDS Bphyt_2034 NC_010681.1 2298664 2299932 D PFAM: integrase family protein; KEGG: bmu:Bmul_4162 integrase family protein; integrase family protein 2298664..2299932 Burkholderia phytofirmans PsJN 6283382 YP_001895666.1 CDS Bphyt_2035 NC_010681.1 2300036 2301898 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(2300036..2301898) Burkholderia phytofirmans PsJN 6283383 YP_001895667.1 CDS Bphyt_2036 NC_010681.1 2302182 2303189 R KEGG: rme:Rmet_3594 lipoprotein transmembrane; lipoprotein transmembrane complement(2302182..2303189) Burkholderia phytofirmans PsJN 6283384 YP_001895668.1 CDS Bphyt_2037 NC_010681.1 2303186 2303947 R KEGG: bxe:Bxe_A2783 transmembrane transcriptional regulator(anti-sigma factor) protein, PrtR; transmembrane anti-sigma factor complement(2303186..2303947) Burkholderia phytofirmans PsJN 6282153 YP_001895669.1 CDS Bphyt_2038 NC_010681.1 2304178 2304921 D KEGG: bpd:BURPS668_A0134 lipoprotein; lipoprotein 2304178..2304921 Burkholderia phytofirmans PsJN 6282154 YP_001895670.1 CDS Bphyt_2039 NC_010681.1 2305197 2305787 D PFAM: protein of unknown function UPF0016; KEGG: bxe:Bxe_A0925 hypothetical protein; hypothetical protein 2305197..2305787 Burkholderia phytofirmans PsJN 6282155 YP_001895671.1 CDS Bphyt_2040 NC_010681.1 2305843 2306361 R PFAM: protein of unknown function DUF1452; KEGG: bxe:Bxe_B2012 hypothetical protein; hypothetical protein complement(2305843..2306361) Burkholderia phytofirmans PsJN 6282156 YP_001895672.1 CDS Bphyt_2041 NC_010681.1 2306389 2306793 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bxe:Bxe_B0403 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(2306389..2306793) Burkholderia phytofirmans PsJN 6282157 YP_001895673.1 CDS Bphyt_2042 NC_010681.1 2307288 2307713 R PFAM: protein of unknown function DUF1810; KEGG: mav:MAV_2841 hypothetical protein; hypothetical protein complement(2307288..2307713) Burkholderia phytofirmans PsJN 6282158 YP_001895674.1 CDS Bphyt_2043 NC_010681.1 2307924 2308706 R PFAM: extracellular solute-binding protein family 3; KEGG: bmu:Bmul_3347 cationic amino acid ABC transporter periplasmic binding protein; family 3 extracellular solute-binding protein complement(2307924..2308706) Burkholderia phytofirmans PsJN 6282212 YP_001895675.1 CDS Bphyt_2044 NC_010681.1 2308872 2309744 R PFAM: manganese containing catalase; KEGG: bxe:Bxe_B0318 non-heme catalase KatN; catalase complement(2308872..2309744) Burkholderia phytofirmans PsJN 6282213 YP_001895676.1 CDS Bphyt_2045 NC_010681.1 2310308 2311165 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2674 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2310308..2311165) Burkholderia phytofirmans PsJN 6282214 YP_001895677.1 CDS Bphyt_2046 NC_010681.1 2311270 2312571 D PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B2675 aminotransferase; class III aminotransferase 2311270..2312571 Burkholderia phytofirmans PsJN 6282215 YP_001895678.1 CDS Bphyt_2047 NC_010681.1 2312928 2315513 D catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 2312928..2315513 Burkholderia phytofirmans PsJN 6282216 YP_001895679.1 CDS Bphyt_2048 NC_010681.1 2316027 2316470 R PFAM: helix-turn-helix HxlR type; KEGG: ppu:PP_2987 hypothetical protein; HxlR family transcriptional regulator complement(2316027..2316470) Burkholderia phytofirmans PsJN 6282217 YP_001895680.1 CDS Bphyt_2049 NC_010681.1 2316559 2317419 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_0106 short chain dehydrogenase; short chain dehydrogenase 2316559..2317419 Burkholderia phytofirmans PsJN 6282256 YP_001895681.1 CDS Bphyt_2050 NC_010681.1 2317429 2317836 D KEGG: pol:Bpro_0104 hypothetical protein; hypothetical protein 2317429..2317836 Burkholderia phytofirmans PsJN 6282257 YP_001895682.1 CDS Bphyt_2051 NC_010681.1 2317932 2318933 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: aba:acid345_4584 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase zinc-binding domain-containing protein 2317932..2318933 Burkholderia phytofirmans PsJN 6282258 YP_001895683.1 CDS Bphyt_2052 NC_010681.1 2319031 2319573 R PFAM: regulatory protein MarR; KEGG: rme:Rmet_1800 MarR family transcriptional regulator; MarR family transcriptional regulator complement(2319031..2319573) Burkholderia phytofirmans PsJN 6282259 YP_001895684.1 CDS Bphyt_2053 NC_010681.1 2319705 2321276 D PFAM: sulfatase; KEGG: reh:H16_B1528 sulfatase; sulfatase 2319705..2321276 Burkholderia phytofirmans PsJN 6282260 YP_001895685.1 CDS Bphyt_2054 NC_010681.1 2321353 2322690 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5600 major facilitator superfamily MFS_1; major facilitator superfamily protein 2321353..2322690 Burkholderia phytofirmans PsJN 6282261 YP_001895686.1 CDS Bphyt_2057 NC_010681.1 2323605 2325344 R component of the membrane-bound D-lactate oxidase FAD-binding, NADH independent; D-lactate dehydrogenase complement(2323605..2325344) Burkholderia phytofirmans PsJN 6283014 YP_001895687.1 CDS Bphyt_2058 NC_010681.1 2325496 2326395 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2161 LysR family transcriptional regulator; LysR family transcriptional regulator 2325496..2326395 Burkholderia phytofirmans PsJN 6283015 YP_001895688.1 CDS Bphyt_2059 NC_010681.1 2326484 2326954 R PFAM: UspA domain protein; KEGG: reh:H16_B2238 universal stress protein, UspA family; UspA domain-containing protein complement(2326484..2326954) Burkholderia phytofirmans PsJN 6283016 YP_001895689.1 CDS Bphyt_2060 NC_010681.1 2327121 2327330 R KEGG: bxe:Bxe_C1353 hypothetical protein; hypothetical protein complement(2327121..2327330) Burkholderia phytofirmans PsJN 6283017 YP_001895690.1 CDS Bphyt_2061 NC_010681.1 2327393 2327686 R PFAM: GYD family protein; KEGG: rso:RSc0133 hypothetical protein; GYD family protein complement(2327393..2327686) Burkholderia phytofirmans PsJN 6283018 YP_001895691.1 CDS Bphyt_2062 NC_010681.1 2327888 2328484 R TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mpt:Mpe_A3529 lipoprotein; lipoprotein A complement(2327888..2328484) Burkholderia phytofirmans PsJN 6282230 YP_001895692.1 CDS Bphyt_2065 NC_010681.1 2329668 2330630 R PFAM: import inner membrane translocase subunit Tim44; KEGG: bxe:Bxe_B2096 hypothetical protein; import inner membrane translocase subunit Tim44 complement(2329668..2330630) Burkholderia phytofirmans PsJN 6282233 YP_001895693.1 CDS Bphyt_2066 NC_010681.1 2330716 2331207 R PFAM: hypothetical protein; KEGG: bxe:Bxe_B2095 hypothetical protein; hypothetical protein complement(2330716..2331207) Burkholderia phytofirmans PsJN 6282234 YP_001895694.1 CDS Bphyt_2067 NC_010681.1 2331356 2332252 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2094 LysR family transcriptional regulator; LysR family transcriptional regulator 2331356..2332252 Burkholderia phytofirmans PsJN 6282235 YP_001895695.1 CDS Bphyt_2068 NC_010681.1 2332318 2332719 D KEGG: bxe:Bxe_B0679 hypothetical protein; hypothetical protein 2332318..2332719 Burkholderia phytofirmans PsJN 6282236 YP_001895696.1 CDS Bphyt_2069 NC_010681.1 2332748 2333872 R associated with arginine deiminase pathway genes; probably functions in arginine catabolism; transaminase complement(2332748..2333872) Burkholderia phytofirmans PsJN 6284509 YP_001895697.1 CDS Bphyt_2070 NC_010681.1 2333918 2335159 R PFAM: FAD dependent oxidoreductase; KEGG: bmu:Bmul_2537 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2333918..2335159) Burkholderia phytofirmans PsJN 6284510 YP_001895698.1 CDS Bphyt_2071 NC_010681.1 2335257 2336045 R PFAM: extracellular solute-binding protein family 3; KEGG: bcm:Bcenmc03_0821 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(2335257..2336045) Burkholderia phytofirmans PsJN 6284511 YP_001895699.1 CDS Bphyt_2072 NC_010681.1 2336286 2337254 D PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bur:Bcep18194_A3938 ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase/mu-crystallin 2336286..2337254 Burkholderia phytofirmans PsJN 6284512 YP_001895700.1 CDS Bphyt_2073 NC_010681.1 2337324 2338019 D PFAM: YheO domain protein; KEGG: bvi:Bcep1808_0785 Fis family transcriptional regulator; YheO domain-containing protein 2337324..2338019 Burkholderia phytofirmans PsJN 6284513 YP_001895701.1 CDS Bphyt_2074 NC_010681.1 2338455 2340773 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: cvi:CV_3148 hypothetical protein; Fis family transcriptional regulator 2338455..2340773 Burkholderia phytofirmans PsJN 6284514 YP_001895702.1 CDS Bphyt_2075 NC_010681.1 2340763 2341980 D PFAM: protein of unknown function DUF917; KEGG: pst:PSPTO_2260 hypothetical protein; hypothetical protein 2340763..2341980 Burkholderia phytofirmans PsJN 6281376 YP_001895703.1 CDS Bphyt_2076 NC_010681.1 2341977 2342714 D PFAM: Asp/Glu/hydantoin racemase; KEGG: pst:PSPTO_2261 racemase; Asp/Glu/hydantoin racemase 2341977..2342714 Burkholderia phytofirmans PsJN 6281377 YP_001895704.1 CDS Bphyt_2077 NC_010681.1 2343710 2343898 D KEGG: bxe:Bxe_B2061 hypothetical protein; hypothetical protein 2343710..2343898 Burkholderia phytofirmans PsJN 6281378 YP_001895705.1 CDS Bphyt_2078 NC_010681.1 2344372 2346633 D TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: bxe:Bxe_A0772 haem catalase/peroxidase; catalase/peroxidase HPI 2344372..2346633 Burkholderia phytofirmans PsJN 6281379 YP_001895706.1 CDS Bphyt_2079 NC_010681.1 2346897 2347589 D PFAM: NnrUfamily protein; KEGG: rme:Rmet_4739 NnrU; NnrU family protein 2346897..2347589 Burkholderia phytofirmans PsJN 6281380 YP_001895707.1 CDS Bphyt_2080 NC_010681.1 2347626 2347937 R KEGG: bxe:Bxe_A3461 hypothetical protein; hypothetical protein complement(2347626..2347937) Burkholderia phytofirmans PsJN 6281381 YP_001895708.1 CDS Bphyt_2081 NC_010681.1 2348148 2348387 D KEGG: bxe:Bxe_B1570 hypothetical protein; hypothetical protein 2348148..2348387 Burkholderia phytofirmans PsJN 6281382 YP_001895709.1 CDS Bphyt_2082 NC_010681.1 2348622 2349062 D PFAM: NUDIX hydrolase; KEGG: rme:Rmet_5170 NUDIX hydrolase; NUDIX hydrolase 2348622..2349062 Burkholderia phytofirmans PsJN 6282693 YP_001895710.1 CDS Bphyt_2083 NC_010681.1 2349090 2349533 R KEGG: bxe:Bxe_B0349 hypothetical protein; hypothetical protein complement(2349090..2349533) Burkholderia phytofirmans PsJN 6282694 YP_001895711.1 CDS Bphyt_2084 NC_010681.1 2349868 2351367 R PFAM: CHASE2 domain protein; KEGG: bbt:BBta_7152 adenylate/guanylyl cyclase with a CHASE2 domain; Chase2 sensor protein complement(2349868..2351367) Burkholderia phytofirmans PsJN 6282695 YP_001895712.1 CDS Bphyt_2085 NC_010681.1 2351390 2352004 R PFAM: OmpA/MotB domain protein; KEGG: dar:Daro_1992 OmpA/MotB; OmpA/MotB domain-containing protein complement(2351390..2352004) Burkholderia phytofirmans PsJN 6282696 YP_001895713.1 CDS Bphyt_2086 NC_010681.1 2352001 2352468 R KEGG: dar:Daro_1991 hypothetical protein; hypothetical protein complement(2352001..2352468) Burkholderia phytofirmans PsJN 6282697 YP_001895714.1 CDS Bphyt_2087 NC_010681.1 2352791 2354248 D PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: dac:Daci_1280 permease for cytosine/purines uracil thiamine allantoin; cytosine/purines uracil thiamine allantoin permease 2352791..2354248 Burkholderia phytofirmans PsJN 6282698 YP_001895715.1 CDS Bphyt_2088 NC_010681.1 2354381 2355751 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:bll5496 hypothetical metabolite transport protein; major facilitator superfamily protein complement(2354381..2355751) Burkholderia phytofirmans PsJN 6284585 YP_001895716.1 CDS Bphyt_2089 NC_010681.1 2355811 2357061 R PFAM: amidohydrolase; amidohydrolase; KEGG: bra:BRADO4760 conserved hypothetical protein; amidohydrolase; amidohydrolase complement(2355811..2357061) Burkholderia phytofirmans PsJN 6284586 YP_001895717.1 CDS Bphyt_2090 NC_010681.1 2357407 2357613 D KEGG: bam:Bamb_6395 hypothetical protein; hypothetical protein 2357407..2357613 Burkholderia phytofirmans PsJN 6284587 YP_001895718.1 CDS Bphyt_2091 NC_010681.1 2357654 2357812 D KEGG: bvi:Bcep1808_2875 hypothetical protein; hypothetical protein 2357654..2357812 Burkholderia phytofirmans PsJN 6284588 YP_001895719.1 CDS Bphyt_2092 NC_010681.1 2357891 2358394 R KEGG: bps:BPSS0715 hypothetical protein; hypothetical protein complement(2357891..2358394) Burkholderia phytofirmans PsJN 6284589 YP_001895720.1 CDS Bphyt_2094 NC_010681.1 2358837 2359517 R KEGG: bxe:Bxe_A2174 hypothetical protein; hypothetical protein complement(2358837..2359517) Burkholderia phytofirmans PsJN 6284591 YP_001895721.1 CDS Bphyt_2095 NC_010681.1 2359514 2360920 R PFAM: selenium-binding protein; KEGG: bxe:Bxe_A2173 redox protein, selenium binding; selenium-binding protein complement(2359514..2360920) Burkholderia phytofirmans PsJN 6283328 YP_001895722.1 CDS Bphyt_2096 NC_010681.1 2361524 2362591 D KEGG: bxe:Bxe_A2160 ABC sulfate ester transporter periplasmic ligand binding protein; sulfate ester ABC transporter substrate-binding protein 2361524..2362591 Burkholderia phytofirmans PsJN 6283329 YP_001895723.1 CDS Bphyt_2097 NC_010681.1 2362610 2363470 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2159 ABC sulfate ester transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2362610..2363470 Burkholderia phytofirmans PsJN 6283330 YP_001895724.1 CDS Bphyt_2098 NC_010681.1 2363516 2364388 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2158 ABC sulfate ester transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2363516..2364388 Burkholderia phytofirmans PsJN 6283331 YP_001895725.1 CDS Bphyt_2099 NC_010681.1 2364423 2365319 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A2157 ABC sulfate ester transporter ATPase; ABC transporter 2364423..2365319 Burkholderia phytofirmans PsJN 6283332 YP_001895726.1 CDS Bphyt_2100 NC_010681.1 2365366 2366739 D KEGG: bxe:Bxe_A2156 xenobiotic (desulfurization)monooxygenase subunit A, NtaA/SnaA/SoxA/DszA family; xenobiotic (desulfurization)monooxygenase subunit A, NtaA/SnaA/SoxA/DszA family 2365366..2366739 Burkholderia phytofirmans PsJN 6283333 YP_001895727.1 CDS Bphyt_2101 NC_010681.1 2366809 2367756 D PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: bxe:Bxe_A2155 alpha-ketoglutarate-dependent taurine dioxygenase; taurine dioxygenase 2366809..2367756 Burkholderia phytofirmans PsJN 6284019 YP_001895728.1 CDS Bphyt_2103 NC_010681.1 2368189 2369742 D PFAM: phospholipase D/transphosphatidylase; KEGG: bxe:Bxe_A2154 phospholipase D precursor; phospholipase D/transphosphatidylase 2368189..2369742 Burkholderia phytofirmans PsJN 6284021 YP_001895729.1 CDS Bphyt_2104 NC_010681.1 2369803 2370633 R PFAM: polysaccharide deacetylase; KEGG: bxe:Bxe_A2153 predicted xylanase/chitin deacetylase; polysaccharide deacetylase complement(2369803..2370633) Burkholderia phytofirmans PsJN 6284022 YP_001895730.1 CDS Bphyt_2105 NC_010681.1 2370630 2371745 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2152 glycosyl transferase, group 1 family; group 1 glycosyl transferase complement(2370630..2371745) Burkholderia phytofirmans PsJN 6284023 YP_001895731.1 CDS Bphyt_2106 NC_010681.1 2372304 2372921 R PFAM: ThiJ/PfpI domain protein; KEGG: bpl:BURPS1106A_A0609 DJ-1/PfpI family protein; ThiJ/PfpI domain-containing protein complement(2372304..2372921) Burkholderia phytofirmans PsJN 6284024 YP_001895732.1 CDS Bphyt_2107 NC_010681.1 2373085 2374419 D PFAM: aminotransferase class V; regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bte:BTH_II1967 aminotransferase family protein; GntR family transcriptional regulator 2373085..2374419 Burkholderia phytofirmans PsJN 6283886 YP_001895733.1 CDS Bphyt_2108 NC_010681.1 2374669 2375439 D PFAM: class II aldolase/adducin family protein; KEGG: bbr:BB2676 hypothetical protein; hypothetical protein 2374669..2375439 Burkholderia phytofirmans PsJN 6283887 YP_001895734.1 CDS Bphyt_2109 NC_010681.1 2375828 2376970 D PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein; KEGG: cak:Caul_2812 prolyl-tRNA synthetase; Proline--tRNA ligase 2375828..2376970 Burkholderia phytofirmans PsJN 6283888 YP_001895735.1 CDS Bphyt_2110 NC_010681.1 2377121 2377450 R KEGG: bxe:Bxe_A2141 hypothetical protein; hypothetical protein complement(2377121..2377450) Burkholderia phytofirmans PsJN 6283889 YP_001895736.1 CDS Bphyt_2111 NC_010681.1 2377673 2378164 D PFAM: endoribonuclease L-PSP; KEGG: rru:Rru_A2457 endoribonuclease L-PSP; endoribonuclease L-PSP 2377673..2378164 Burkholderia phytofirmans PsJN 6283890 YP_001895737.1 CDS Bphyt_2112 NC_010681.1 2378647 2380101 D KEGG: bxe:Bxe_A2129 hypothetical protein; hypothetical protein 2378647..2380101 Burkholderia phytofirmans PsJN 6283891 YP_001895738.1 CDS Bphyt_2113 NC_010681.1 2380124 2381086 D KEGG: bxe:Bxe_A2128 hypothetical protein; hypothetical protein 2380124..2381086 Burkholderia phytofirmans PsJN 6283892 YP_001895739.1 CDS Bphyt_2114 NC_010681.1 2381250 2382869 D PFAM: hypothetical protein; KEGG: bxe:Bxe_A2127 paraquat-inducible transmembrane protein, PqiB; hypothetical protein 2381250..2382869 Burkholderia phytofirmans PsJN 6282834 YP_001895740.1 CDS Bphyt_2115 NC_010681.1 2382876 2385302 R PFAM: organic solvent tolerance protein; KEGG: bxe:Bxe_A4024 organic solvent tolerance protein; organic solvent tolerance protein complement(2382876..2385302) Burkholderia phytofirmans PsJN 6282835 YP_001895741.1 CDS Bphyt_2116 NC_010681.1 2385325 2385729 R hypothetical protein complement(2385325..2385729) Burkholderia phytofirmans PsJN 6282836 YP_001895742.1 CDS Bphyt_2117 NC_010681.1 2385722 2385913 R hypothetical protein complement(2385722..2385913) Burkholderia phytofirmans PsJN 6282837 YP_001895743.1 CDS Bphyt_2118 NC_010681.1 2386237 2388546 D TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bxe:Bxe_A1690 outer membrane antigen; outer membrane protein assembly complex, YaeT protein 2386237..2388546 Burkholderia phytofirmans PsJN 6282838 YP_001895744.1 CDS Bphyt_2119 NC_010681.1 2388587 2390452 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reu:Reut_B4490 acetolactate synthase large subunit; acetolactate synthase large subunit complement(2388587..2390452) Burkholderia phytofirmans PsJN 6282839 YP_001895745.1 CDS sucA NC_010681.1 2390768 2393617 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component complement(2390768..2393617) Burkholderia phytofirmans PsJN 6282955 YP_001895746.1 CDS Bphyt_2121 NC_010681.1 2394143 2395168 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: reu:Reut_B4484 helix-turn-helix, AraC type:ThiJ/PfpI; AraC family transcriptional regulator 2394143..2395168 Burkholderia phytofirmans PsJN 6282956 YP_001895747.1 CDS Bphyt_2122 NC_010681.1 2395224 2395790 D PFAM: uracil-DNA glycosylase superfamily; KEGG: bur:Bcep18194_A6106 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily 2395224..2395790 Burkholderia phytofirmans PsJN 6282957 YP_001895748.1 CDS Bphyt_2123 NC_010681.1 2395844 2396803 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A3317 GstR-like transcriptional regulator protein; LysR family transcriptional regulator complement(2395844..2396803) Burkholderia phytofirmans PsJN 6282958 YP_001895749.1 CDS Bphyt_2124 NC_010681.1 2397283 2397957 D KEGG: reu:Reut_B4489 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 2397283..2397957 Burkholderia phytofirmans PsJN 6282959 YP_001895750.1 CDS Bphyt_2125 NC_010681.1 2398280 2399893 D PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4488 major facilitator superfamily MFS_1; major facilitator superfamily protein 2398280..2399893 Burkholderia phytofirmans PsJN 6282960 YP_001895751.1 CDS Bphyt_2126 NC_010681.1 2399906 2400982 D PFAM: secretion protein HlyD; KEGG: reu:Reut_B4487 secretion protein HlyD; secretion protein HlyD 2399906..2400982 Burkholderia phytofirmans PsJN 6282961 YP_001895752.1 CDS Bphyt_2127 NC_010681.1 2400979 2402520 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_B4486 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 2400979..2402520 Burkholderia phytofirmans PsJN 6282995 YP_001895753.1 CDS Bphyt_2128 NC_010681.1 2402730 2403695 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 2402730..2403695 Burkholderia phytofirmans PsJN 6282996 YP_001895754.1 CDS Bphyt_2129 NC_010681.1 2404547 2406484 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: tbd:Tbd_2571 periplasmic sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 2404547..2406484 Burkholderia phytofirmans PsJN 6282997 YP_001895755.1 CDS Bphyt_2130 NC_010681.1 2406435 2407154 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A1151 two-component response regulator; LuxR family transcriptional regulator complement(2406435..2407154) Burkholderia phytofirmans PsJN 6282998 YP_001895756.1 CDS Bphyt_2131 NC_010681.1 2407462 2408121 R PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: bxe:Bxe_B2670 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase complement(2407462..2408121) Burkholderia phytofirmans PsJN 6282999 YP_001895757.1 CDS Bphyt_2132 NC_010681.1 2408255 2409151 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2671 LysR family transcriptional regulator; LysR family transcriptional regulator 2408255..2409151 Burkholderia phytofirmans PsJN 6283000 YP_001895758.1 CDS Bphyt_2133 NC_010681.1 2409482 2410060 D KEGG: bxe:Bxe_A2125 hypothetical protein; hypothetical protein 2409482..2410060 Burkholderia phytofirmans PsJN 6281194 YP_001895759.1 CDS Bphyt_2134 NC_010681.1 2410057 2411916 D KEGG: bxe:Bxe_A2124 molecular chaperone protein HspA/DnaK; molecular chaperone protein HspA/DnaK 2410057..2411916 Burkholderia phytofirmans PsJN 6281195 YP_001895760.1 CDS Bphyt_2135 NC_010681.1 2411913 2414798 D KEGG: bxe:Bxe_A2123 chaperone protein, HscA/DnaK; chaperone protein, HscA/DnaK 2411913..2414798 Burkholderia phytofirmans PsJN 6281196 YP_001895761.1 CDS Bphyt_2136 NC_010681.1 2414810 2415019 R hypothetical protein complement(2414810..2415019) Burkholderia phytofirmans PsJN 6281197 YP_001895762.1 CDS Bphyt_2137 NC_010681.1 2415388 2416170 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xcv:XCV3897 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2415388..2416170) Burkholderia phytofirmans PsJN 6281198 YP_001895763.1 CDS Bphyt_2138 NC_010681.1 2416303 2417211 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcv:XCV3896 LysR family transcriptional regulator; LysR family transcriptional regulator 2416303..2417211 Burkholderia phytofirmans PsJN 6281199 YP_001895764.1 CDS Bphyt_2139 NC_010681.1 2417225 2418256 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: bxe:Bxe_A2121 diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(2417225..2418256) Burkholderia phytofirmans PsJN 6281200 YP_001895765.1 CDS Bphyt_2140 NC_010681.1 2418493 2419389 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_II0104 transcriptional regulator, LysR family; LysR family transcriptional regulator 2418493..2419389 Burkholderia phytofirmans PsJN 6282739 YP_001895766.1 CDS Bphyt_2141 NC_010681.1 2419426 2420229 R catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase complement(2419426..2420229) Burkholderia phytofirmans PsJN 6282740 YP_001895767.1 CDS Bphyt_2142 NC_010681.1 2420286 2421518 R catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate; 2-aminoethylphosphonate--pyruvate transaminase complement(2420286..2421518) Burkholderia phytofirmans PsJN 6282741 YP_001895768.1 CDS Bphyt_2143 NC_010681.1 2421638 2422546 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2115 LysR family transcriptional regulator; LysR family transcriptional regulator 2421638..2422546 Burkholderia phytofirmans PsJN 6282742 YP_001895769.1 CDS Bphyt_2144 NC_010681.1 2422655 2423401 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A2114 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2422655..2423401) Burkholderia phytofirmans PsJN 6282743 YP_001895770.1 CDS Bphyt_2145 NC_010681.1 2423710 2424624 R controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR complement(2423710..2424624) Burkholderia phytofirmans PsJN 6282744 YP_001895771.1 CDS Bphyt_2146 NC_010681.1 2424748 2425407 D PFAM: carbonic anhydrase; KEGG: bur:Bcep18194_B2816 carbonate dehydratase; carbonate dehydratase 2424748..2425407 Burkholderia phytofirmans PsJN 6281673 YP_001895772.1 CDS Bphyt_2147 NC_010681.1 2425447 2425917 D catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 2425447..2425917 Burkholderia phytofirmans PsJN 6281674 YP_001895773.1 CDS Bphyt_2148 NC_010681.1 2426115 2426846 R PFAM: protein of unknown function DUF81; KEGG: bxe:Bxe_A2113 conserved hypothetical membrane protein, DUF81; hypothetical protein complement(2426115..2426846) Burkholderia phytofirmans PsJN 6281675 YP_001895774.1 CDS Bphyt_2149 NC_010681.1 2427016 2427900 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2112 LysR family transcriptional regulator; LysR family transcriptional regulator 2427016..2427900 Burkholderia phytofirmans PsJN 6281676 YP_001895775.1 CDS Bphyt_2150 NC_010681.1 2428064 2429038 D PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: bxe:Bxe_A2111 ferredoxin-oxidoreductase FAD/NAD(P)-binding, ring hydroxylating dioxygenase reductase subunit; ferredoxin 2428064..2429038 Burkholderia phytofirmans PsJN 6281677 YP_001895776.1 CDS Bphyt_2151 NC_010681.1 2429089 2429379 R KEGG: bxe:Bxe_A2110 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase; muconolactone delta-isomerase complement(2429089..2429379) Burkholderia phytofirmans PsJN 6281678 YP_001895777.1 CDS Bphyt_2152 NC_010681.1 2429520 2430428 R TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bxe:Bxe_A2109 catechol 1,2-dioxygenase (CatA); catechol 1,2-dioxygenase complement(2429520..2430428) Burkholderia phytofirmans PsJN 6281679 YP_001895778.1 CDS Bphyt_2153 NC_010681.1 2430498 2431655 R KEGG: bxe:Bxe_A2108 muconate cycloisomerase; TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: mandelate racemase/muconate lactonizing protein; muconate and chloromuconate cycloisomerase complement(2430498..2431655) Burkholderia phytofirmans PsJN 6281957 YP_001895779.1 CDS Bphyt_2154 NC_010681.1 2431759 2432646 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2107 LysR family transcriptional regulator; LysR family transcriptional regulator 2431759..2432646 Burkholderia phytofirmans PsJN 6281958 YP_001895780.1 CDS Bphyt_2155 NC_010681.1 2432668 2433618 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2106 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2432668..2433618) Burkholderia phytofirmans PsJN 6281959 YP_001895781.1 CDS Bphyt_2156 NC_010681.1 2433692 2434975 D PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, subunit alpha-like; KEGG: bxe:Bxe_A2105 (poly)aromatic ring hydroxylating dioxygenase, alpha subunit (Rieske (2Fe-2S) region); Rieske (2Fe-2S) domain-containing protein 2433692..2434975 Burkholderia phytofirmans PsJN 6281960 YP_001895782.1 CDS Bphyt_2157 NC_010681.1 2434972 2435472 D PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bxe:Bxe_A2104 aromatic-ring-hydroxylating dioxygenase, subunit beta; aromatic-ring-hydroxylating dioxygenase subunit beta 2434972..2435472 Burkholderia phytofirmans PsJN 6281961 YP_001895783.1 CDS Bphyt_2158 NC_010681.1 2435505 2435888 D PFAM: 4-oxalocrotonate tautomerase; KEGG: bmu:Bmul_5081 4-oxalocrotonate tautomerase family enzyme; 4-oxalocrotonate tautomerase 2435505..2435888 Burkholderia phytofirmans PsJN 6281962 YP_001895784.1 CDS Bphyt_2159 NC_010681.1 2435929 2437245 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2103 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein 2435929..2437245 Burkholderia phytofirmans PsJN 6281801 YP_001895785.1 CDS Bphyt_2160 NC_010681.1 2437256 2438776 R KEGG: bmu:Bmul_5082 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(2437256..2438776) Burkholderia phytofirmans PsJN 6281802 YP_001895786.1 CDS Bphyt_2161 NC_010681.1 2439013 2440191 D PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B2500 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase type 2 domain 2439013..2440191 Burkholderia phytofirmans PsJN 6281803 YP_001895787.1 CDS Bphyt_2162 NC_010681.1 2440259 2440636 D KEGG: bxe:Bxe_A2102 hypothetical protein; hypothetical protein 2440259..2440636 Burkholderia phytofirmans PsJN 6281804 YP_001895788.1 CDS Bphyt_2163 NC_010681.1 2440655 2441170 D KEGG: bxe:Bxe_A2101 hypothetical protein; hypothetical protein 2440655..2441170 Burkholderia phytofirmans PsJN 6281805 YP_001895789.1 CDS Bphyt_2164 NC_010681.1 2441167 2442291 D PFAM: amidase; KEGG: bxe:Bxe_A2100 Asp-tRNA Asn/Glu-tRNAGln amidotransferase subunit alpha; amidase 2441167..2442291 Burkholderia phytofirmans PsJN 6281806 YP_001895790.1 CDS Bphyt_2165 NC_010681.1 2442356 2443099 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A2099 short-chain dehydrogenase/reductase, TsaC-like; short-chain dehydrogenase/reductase SDR 2442356..2443099 Burkholderia phytofirmans PsJN 6281750 YP_001895791.1 CDS Bphyt_2166 NC_010681.1 2443151 2443813 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bcm:Bcenmc03_3910 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator complement(2443151..2443813) Burkholderia phytofirmans PsJN 6281751 YP_001895792.1 CDS Bphyt_2167 NC_010681.1 2444072 2444611 D TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; PFAM: flavin reductase domain protein FMN-binding; KEGG: bte:BTH_II0316 4-hydroxyphenylacetate 3-monooxygenase, reductase component; 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit 2444072..2444611 Burkholderia phytofirmans PsJN 6281752 YP_001895793.1 CDS Bphyt_2168 NC_010681.1 2444640 2445572 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_2711 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2444640..2445572) Burkholderia phytofirmans PsJN 6281753 YP_001895794.1 CDS Bphyt_2169 NC_010681.1 2445891 2447213 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bam:Bamb_2710 major facilitator superfamily MFS_1; major facilitator superfamily protein 2445891..2447213 Burkholderia phytofirmans PsJN 6281754 YP_001895795.1 CDS Bphyt_2170 NC_010681.1 2447259 2448722 D PFAM: amidase; KEGG: bam:Bamb_2709 amidase; amidase 2447259..2448722 Burkholderia phytofirmans PsJN 6281755 YP_001895796.1 CDS Bphyt_2171 NC_010681.1 2448854 2450056 D PFAM: porin Gram-negative type; KEGG: bam:Bamb_2708 porin, gram-negative type; porin 2448854..2450056 Burkholderia phytofirmans PsJN 6281756 YP_001895797.1 CDS Bphyt_2173 NC_010681.1 2450352 2450744 R PFAM: copper resistance protein C; KEGG: bxe:Bxe_A2084 cation resistance protein, CopC-like; copper resistance protein C complement(2450352..2450744) Burkholderia phytofirmans PsJN 6281914 YP_001895798.1 CDS Bphyt_2174 NC_010681.1 2450760 2451653 R KEGG: bxe:Bxe_A2083 hypothetical protein; hypothetical protein complement(2450760..2451653) Burkholderia phytofirmans PsJN 6281915 YP_001895799.1 CDS Bphyt_2175 NC_010681.1 2451760 2452203 R KEGG: bxe:Bxe_A2082 hypothetical protein; hypothetical protein complement(2451760..2452203) Burkholderia phytofirmans PsJN 6281916 YP_001895800.1 CDS Bphyt_2176 NC_010681.1 2452334 2453686 D KEGG: bxe:Bxe_A2081 TRAP-type uncharacterized transporter, periplasmic component protein; TRAP-type transporter, periplasmic component protein 2452334..2453686 Burkholderia phytofirmans PsJN 6281917 YP_001895801.1 CDS Bphyt_2177 NC_010681.1 2453733 2454488 R PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: bxe:Bxe_A2080 ProQ activator of osmoprotectant transporter ProP; ProQ activator of osmoprotectant transporter ProP complement(2453733..2454488) Burkholderia phytofirmans PsJN 6281918 YP_001895802.1 CDS Bphyt_2178 NC_010681.1 2454665 2455588 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2079 LysR family transcriptional regulator; LysR family transcriptional regulator 2454665..2455588 Burkholderia phytofirmans PsJN 6281718 YP_001895803.1 CDS Bphyt_2179 NC_010681.1 2455585 2456961 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2078 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(2455585..2456961) Burkholderia phytofirmans PsJN 6281719 YP_001895804.1 CDS Bphyt_2180 NC_010681.1 2457055 2458788 R PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: mrd:Mrad2831_4733 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(2457055..2458788) Burkholderia phytofirmans PsJN 6281720 YP_001895805.1 CDS Bphyt_2181 NC_010681.1 2458834 2459640 R PFAM: enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A2077 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(2458834..2459640) Burkholderia phytofirmans PsJN 6281721 YP_001895806.1 CDS Bphyt_2182 NC_010681.1 2459644 2461221 R PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A2076 long-chain-fatty acid CoA ligase; AMP-dependent synthetase and ligase complement(2459644..2461221) Burkholderia phytofirmans PsJN 6281722 YP_001895807.1 CDS Bphyt_2183 NC_010681.1 2461214 2461771 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_A2075 oxidoreductase, iron-sulfur subunit; (2Fe-2S)-binding domain-containing protein complement(2461214..2461771) Burkholderia phytofirmans PsJN 6281723 YP_001895808.1 CDS Bphyt_2184 NC_010681.1 2461768 2462589 R PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bxe:Bxe_A2074 molybdopterin dehydrogenase, FAD-binding; molybdopterin dehydrogenase complement(2461768..2462589) Burkholderia phytofirmans PsJN 6281724 YP_001895809.1 CDS Bphyt_2185 NC_010681.1 2462586 2465624 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; cyclase/dehydrase; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; carbon monoxide dehydrogenase subunit G; KEGG: bxe:Bxe_A2073 carbon-monoxide dehydrogenase; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(2462586..2465624) Burkholderia phytofirmans PsJN 6283905 YP_001895810.1 CDS Bphyt_2186 NC_010681.1 2465621 2466247 R TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: bxe:Bxe_A2072 aromatic acid decarboxylase, flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(2465621..2466247) Burkholderia phytofirmans PsJN 6283906 YP_001895811.1 CDS Bphyt_2187 NC_010681.1 2466240 2467724 R TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein; KEGG: bxe:Bxe_A2071 carboxylyase-related protein; UbiD family decarboxylase complement(2466240..2467724) Burkholderia phytofirmans PsJN 6283907 YP_001895812.1 CDS Bphyt_2188 NC_010681.1 2468032 2469021 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2070 LysR family transcriptional regulator; LysR family transcriptional regulator 2468032..2469021 Burkholderia phytofirmans PsJN 6283908 YP_001895813.1 CDS Bphyt_2189 NC_010681.1 2469047 2470411 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A3457 signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2469047..2470411) Burkholderia phytofirmans PsJN 6283909 YP_001895814.1 CDS Bphyt_2190 NC_010681.1 2470411 2471070 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A3456 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator complement(2470411..2471070) Burkholderia phytofirmans PsJN 6283910 YP_001895815.1 CDS Bphyt_2191 NC_010681.1 2471288 2472766 D PFAM: outer membrane efflux protein; KEGG: acr:Acry_0310 outer membrane efflux protein; outer membrane efflux protein 2471288..2472766 Burkholderia phytofirmans PsJN 6282644 YP_001895816.1 CDS Bphyt_2192 NC_010681.1 2472756 2473877 D TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: acr:Acry_0309 efflux transporter RND family, MFP subunit; RND family efflux transporter MFP subunit 2472756..2473877 Burkholderia phytofirmans PsJN 6282645 YP_001895817.1 CDS Bphyt_2193 NC_010681.1 2473874 2476924 D PFAM: acriflavin resistance protein; KEGG: mca:MCA1935 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 2473874..2476924 Burkholderia phytofirmans PsJN 6282646 YP_001895818.1 CDS Bphyt_2194 NC_010681.1 2477094 2477918 R TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: bxe:Bxe_A2069 hypothetical phospho-beta-glucosidase, YdjC-like protein, cellobiose degradation; hopanoid biosynthesis associated protein HpnK complement(2477094..2477918) Burkholderia phytofirmans PsJN 6282647 YP_001895819.1 CDS Bphyt_2195 NC_010681.1 2477908 2479215 R TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A2068 (ceramide) glycosyl transferase, family2; hopanoid biosynthesis associated glycosyl transferase protein HpnI complement(2477908..2479215) Burkholderia phytofirmans PsJN 6282648 YP_001895820.1 CDS Bphyt_2196 NC_010681.1 2479228 2479578 R KEGG: bxe:Bxe_A2067 hypothetical protein; hypothetical protein complement(2479228..2479578) Burkholderia phytofirmans PsJN 6282649 YP_001895821.1 CDS Bphyt_2197 NC_010681.1 2479758 2480417 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A2066 QseB, two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 2479758..2480417 Burkholderia phytofirmans PsJN 6282650 YP_001895822.1 CDS Bphyt_2198 NC_010681.1 2480414 2481817 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A2065 periplasmic sensor signal transduction histidine kinase, QseC; integral membrane sensor signal transduction histidine kinase 2480414..2481817 Burkholderia phytofirmans PsJN 6282423 YP_001895823.1 CDS Bphyt_2199 NC_010681.1 2481947 2482942 R TIGRFAM: membrane protein; KEGG: bxe:Bxe_A2064 conserved hypothetical protein 374; hypothetical protein complement(2481947..2482942) Burkholderia phytofirmans PsJN 6282424 YP_001895824.1 CDS Bphyt_2200 NC_010681.1 2483039 2484199 R TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; KEGG: bxe:Bxe_A2063 (ceramide) glucosyltransferase; hopanoid biosynthesis associated glycosyl transferase protein HpnI complement(2483039..2484199) Burkholderia phytofirmans PsJN 6282425 YP_001895825.1 CDS Bphyt_2201 NC_010681.1 2484196 2485617 R KEGG: bxe:Bxe_A2062 methyltransferase, or Fe-S oxidoreductase; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; hopanoid biosynthesis associated radical SAM protein HpnJ complement(2484196..2485617) Burkholderia phytofirmans PsJN 6282426 YP_001895826.1 CDS Bphyt_2202 NC_010681.1 2485949 2486152 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_A2061 cold shock transcriptional regulator, CspD; cold-shock DNA-binding domain-containing protein complement(2485949..2486152) Burkholderia phytofirmans PsJN 6282427 YP_001895827.1 CDS Bphyt_2203 NC_010681.1 2486474 2487919 D PFAM: aldehyde dehydrogenase_; KEGG: bxe:Bxe_A2060 succinate-semialdehyde dehydrogenase (NAD(P)+); aldehyde dehydrogenase 2486474..2487919 Burkholderia phytofirmans PsJN 6282428 YP_001895828.1 CDS Bphyt_2204 NC_010681.1 2488006 2488605 D PFAM: GCN5-related N-acetyltransferase; KEGG: mms:mma_1910 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2488006..2488605 Burkholderia phytofirmans PsJN 6281325 YP_001895829.1 CDS Bphyt_2205 NC_010681.1 2488673 2489698 R transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease complement(2488673..2489698) Burkholderia phytofirmans PsJN 6281326 YP_001895830.1 CDS Bphyt_2206 NC_010681.1 2489968 2490804 D 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 2489968..2490804 Burkholderia phytofirmans PsJN 6281327 YP_001895831.1 CDS Bphyt_2207 NC_010681.1 2490845 2491615 D TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: esa:ESA_02139 hypothetical protein; 2-deoxy-D-gluconate 3-dehydrogenase 2490845..2491615 Burkholderia phytofirmans PsJN 6281328 YP_001895832.1 CDS Bphyt_2208 NC_010681.1 2491739 2492611 D PFAM: regulatory protein IclR; Helix-turn-helix type 11 domain protein; transcriptional regulator IclR; KEGG: yen:YE1877 IclR-family transcriptional regulatory protein; IclR family transcriptional regulator 2491739..2492611 Burkholderia phytofirmans PsJN 6281329 YP_001895833.1 CDS Bphyt_2209 NC_010681.1 2492643 2493575 R PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: scl:sce3045 hypothetical protein; taurine dioxygenase complement(2492643..2493575) Burkholderia phytofirmans PsJN 6281330 YP_001895834.1 CDS Bphyt_2210 NC_010681.1 2494168 2494281 D KEGG: bmn:BMA10247_A1920 lipoprotein; lipoprotein 2494168..2494281 Burkholderia phytofirmans PsJN 6281331 YP_001895835.1 CDS Bphyt_2211 NC_010681.1 2494335 2494724 D KEGG: bxe:Bxe_A2058 signal peptide protein; signal peptide protein 2494335..2494724 Burkholderia phytofirmans PsJN 6283670 YP_001895836.1 CDS Bphyt_2212 NC_010681.1 2494803 2495051 D KEGG: bxe:Bxe_A2057 hypothetical protein; hypothetical protein 2494803..2495051 Burkholderia phytofirmans PsJN 6283671 YP_001895837.1 CDS Bphyt_2213 NC_010681.1 2495109 2495351 R KEGG: bxe:Bxe_A2056 hypothetical protein; hypothetical protein complement(2495109..2495351) Burkholderia phytofirmans PsJN 6283672 YP_001895838.1 CDS Bphyt_2214 NC_010681.1 2495680 2496927 R PFAM: mandelate racemase/muconate lactonizing protein; KEGG: cbe:Cbei_4837 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein complement(2495680..2496927) Burkholderia phytofirmans PsJN 6283673 YP_001895839.1 CDS Bphyt_2215 NC_010681.1 2496966 2498264 R PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_II0353 major facilitator family transporter; major facilitator superfamily protein complement(2496966..2498264) Burkholderia phytofirmans PsJN 6283674 YP_001895840.1 CDS Bphyt_2216 NC_010681.1 2498346 2499113 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_C_2598 probable gluconate dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2498346..2499113) Burkholderia phytofirmans PsJN 6283675 YP_001895841.1 CDS Bphyt_2217 NC_010681.1 2499275 2499994 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_3530 GntR-like; GntR family transcriptional regulator complement(2499275..2499994) Burkholderia phytofirmans PsJN 6283650 YP_001895842.1 CDS Bphyt_2218 NC_010681.1 2500275 2500916 R PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A2053 glutathione S-transferase; glutathione S-transferase complement(2500275..2500916) Burkholderia phytofirmans PsJN 6283651 YP_001895843.1 CDS Bphyt_2219 NC_010681.1 2500933 2501469 R PFAM: Chromate transporter; KEGG: bxe:Bxe_A2052 chromate efflux pump; chromate transporter complement(2500933..2501469) Burkholderia phytofirmans PsJN 6283652 YP_001895844.1 CDS Bphyt_2220 NC_010681.1 2501459 2502031 R PFAM: Chromate transporter; KEGG: bxe:Bxe_A2051 chromate efflux pump; chromate transporter complement(2501459..2502031) Burkholderia phytofirmans PsJN 6283653 YP_001895845.1 CDS Bphyt_2222 NC_010681.1 2503673 2504191 R KEGG: bxe:Bxe_A2049 tricarboxylic transporter TctB (4TM)subunit; tricarboxylic transporter TctB (4TM)subunit complement(2503673..2504191) Burkholderia phytofirmans PsJN 6283655 YP_001895846.1 CDS Bphyt_2223 NC_010681.1 2504350 2504730 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A2048 hypothetical lyase, lactoylgluthatione and related lyases; glyoxalase/bleomycin resistance protein/dioxygenase complement(2504350..2504730) Burkholderia phytofirmans PsJN 6283656 YP_001895847.1 CDS Bphyt_2224 NC_010681.1 2504777 2505775 R PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A2047 tricarboxylic transporter periplasmic ligand binding protein, TctC; hypothetical protein complement(2504777..2505775) Burkholderia phytofirmans PsJN 6283201 YP_001895848.1 CDS Bphyt_2225 NC_010681.1 2505809 2506792 R KEGG: bxe:Bxe_A2046 4,5-dihydroxyphthalate decarboxylase (OhpC); 4,5-dihydroxyphthalate decarboxylase complement(2505809..2506792) Burkholderia phytofirmans PsJN 6283202 YP_001895849.1 CDS Bphyt_2226 NC_010681.1 2506972 2507709 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_A2045 GntR family transcriptional regulator; GntR family transcriptional regulator complement(2506972..2507709) Burkholderia phytofirmans PsJN 6283203 YP_001895850.1 CDS Bphyt_2227 NC_010681.1 2507873 2509036 R PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A2044 outer membrane porin, OmpC family; porin complement(2507873..2509036) Burkholderia phytofirmans PsJN 6283204 YP_001895851.1 CDS Bphyt_2228 NC_010681.1 2509287 2510537 D KEGG: bxe:Bxe_A0429 chaperone; chaperone 2509287..2510537 Burkholderia phytofirmans PsJN 6283205 YP_001895852.1 CDS Bphyt_2229 NC_010681.1 2510577 2511341 R PFAM: cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_A2041 chromosome partitioning protein ParA, ATPase; cobyrinic acid ac-diamide synthase complement(2510577..2511341) Burkholderia phytofirmans PsJN 6283206 YP_001895853.1 CDS Bphyt_2230 NC_010681.1 2511475 2512653 R catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase complement(2511475..2512653) Burkholderia phytofirmans PsJN 6281629 YP_001895854.1 CDS Bphyt_2231 NC_010681.1 2512895 2514469 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(2512895..2514469) Burkholderia phytofirmans PsJN 6281630 YP_001895855.1 CDS Bphyt_2232 NC_010681.1 2514816 2516084 R PFAM: virulence factor family protein; KEGG: bxe:Bxe_A2034 virulence protein, type IV secretion protein VirJ-like; virulence factor family protein complement(2514816..2516084) Burkholderia phytofirmans PsJN 6281631 YP_001895856.1 CDS Bphyt_2233 NC_010681.1 2516081 2518675 R PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: bxe:Bxe_A2033 hypothetical protein, LpiA-like; hypothetical protein complement(2516081..2518675) Burkholderia phytofirmans PsJN 6281632 YP_001895857.1 CDS Bphyt_2234 NC_010681.1 2519127 2519267 D KEGG: bxe:Bxe_A2032 hypothetical protein; hypothetical protein 2519127..2519267 Burkholderia phytofirmans PsJN 6281633 YP_001895858.1 CDS Bphyt_2235 NC_010681.1 2519466 2519618 R hypothetical protein complement(2519466..2519618) Burkholderia phytofirmans PsJN 6281634 YP_001895859.1 CDS Bphyt_2236 NC_010681.1 2519848 2521245 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2031 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein 2519848..2521245 Burkholderia phytofirmans PsJN 6281635 YP_001895860.1 CDS Bphyt_2237 NC_010681.1 2521256 2521747 R KEGG: bxe:Bxe_A2030 hypothetical protein; hypothetical protein complement(2521256..2521747) Burkholderia phytofirmans PsJN 6283880 YP_001895861.1 CDS Bphyt_2238 NC_010681.1 2521783 2522439 R PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A2029 glycosyl transferase, family 2; family 2 glycosyl transferase complement(2521783..2522439) Burkholderia phytofirmans PsJN 6283881 YP_001895862.1 CDS Bphyt_2239 NC_010681.1 2522436 2523041 R PFAM: NodS family protein; methyltransferase type 11; methyltransferase type 12; KEGG: bxe:Bxe_A2028 methyltransferase protein; type 12 methyltransferase complement(2522436..2523041) Burkholderia phytofirmans PsJN 6283882 YP_001895863.1 CDS Bphyt_2240 NC_010681.1 2523066 2524244 R KEGG: bxe:Bxe_A2027 acyl-CoA dehydrogenase-related protein; acyl-CoA dehydrogenase-like protein complement(2523066..2524244) Burkholderia phytofirmans PsJN 6283883 YP_001895864.1 CDS Bphyt_2241 NC_010681.1 2524442 2526415 R KEGG: bxe:Bxe_A2026 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase complement(2524442..2526415) Burkholderia phytofirmans PsJN 6283884 YP_001895865.1 CDS Bphyt_2242 NC_010681.1 2526607 2526849 D KEGG: bxe:Bxe_A2025 hypothetical protein; hypothetical protein 2526607..2526849 Burkholderia phytofirmans PsJN 6283885 YP_001895866.1 CDS Bphyt_2243 NC_010681.1 2526932 2527981 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bxe:Bxe_A2024 thioredoxin reductase, TrxB; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2526932..2527981) Burkholderia phytofirmans PsJN 6281520 YP_001895867.1 CDS Bphyt_2244 NC_010681.1 2528221 2528658 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B1427 alkylhydroperoxidase AhpD core; alkylhydroperoxidase 2528221..2528658 Burkholderia phytofirmans PsJN 6281521 YP_001895868.1 CDS Bphyt_2245 NC_010681.1 2528695 2530269 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A2023 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2528695..2530269) Burkholderia phytofirmans PsJN 6281522 YP_001895869.1 CDS Bphyt_2246 NC_010681.1 2530595 2531455 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2022 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2530595..2531455) Burkholderia phytofirmans PsJN 6281523 YP_001895870.1 CDS Bphyt_2247 NC_010681.1 2531625 2533025 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2021 major facilitator superfamily (MFS) multidrug efflux pump; major facilitator superfamily protein 2531625..2533025 Burkholderia phytofirmans PsJN 6281524 YP_001895871.1 CDS Bphyt_2248 NC_010681.1 2533046 2533819 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A2020 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2533046..2533819) Burkholderia phytofirmans PsJN 6281525 YP_001895872.1 CDS Bphyt_2249 NC_010681.1 2534071 2535000 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A2019 LysR family transcriptional regulator; LysR family transcriptional regulator 2534071..2535000 Burkholderia phytofirmans PsJN 6281526 YP_001895873.1 CDS Bphyt_2250 NC_010681.1 2535054 2535305 R KEGG: bxe:Bxe_A2018 hypothetical protein; hypothetical protein complement(2535054..2535305) Burkholderia phytofirmans PsJN 6282989 YP_001895874.1 CDS Bphyt_2251 NC_010681.1 2535480 2535659 D KEGG: bxe:Bxe_A2011 hypothetical protein; hypothetical protein 2535480..2535659 Burkholderia phytofirmans PsJN 6282990 YP_001895875.1 CDS Bphyt_2252 NC_010681.1 2535872 2536954 D PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A2010 glycosyl transferase, family 2; family 2 glycosyl transferase 2535872..2536954 Burkholderia phytofirmans PsJN 6282991 YP_001895876.1 CDS Bphyt_2253 NC_010681.1 2537123 2537344 D KEGG: bxe:Bxe_A2009 hypothetical protein; hypothetical protein 2537123..2537344 Burkholderia phytofirmans PsJN 6282992 YP_001895877.1 CDS Bphyt_2254 NC_010681.1 2537497 2538801 R TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2008 major facilitator superfamily (MFS) dicarboxlate/proton symporter; major facilitator superfamily metabolite/H+ symporter complement(2537497..2538801) Burkholderia phytofirmans PsJN 6282993 YP_001895878.1 CDS Bphyt_2255 NC_010681.1 2539085 2540815 R PFAM: SpoVR family protein; KEGG: bxe:Bxe_A2007 hypothetical protein; SpoVR family protein complement(2539085..2540815) Burkholderia phytofirmans PsJN 6282994 YP_001895879.1 CDS Bphyt_2256 NC_010681.1 2540812 2542083 R PFAM: protein of unknown function DUF444; KEGG: bxe:Bxe_A2006 hypothetical protein; hypothetical protein complement(2540812..2542083) Burkholderia phytofirmans PsJN 6284713 YP_001895880.1 CDS Bphyt_2257 NC_010681.1 2542210 2544132 R PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: bxe:Bxe_A2005 serine protein kinase, PrkA; serine protein kinase PrkA complement(2542210..2544132) Burkholderia phytofirmans PsJN 6284714 YP_001895881.1 CDS Bphyt_2258 NC_010681.1 2544995 2545756 R KEGG: bxe:Bxe_A2003 hydratase/decarboxylase; hydratase/decarboxylase complement(2544995..2545756) Burkholderia phytofirmans PsJN 6284715 YP_001895882.1 CDS Bphyt_2259 NC_010681.1 2546158 2547924 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A2002 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2546158..2547924) Burkholderia phytofirmans PsJN 6284716 YP_001895883.1 CDS Bphyt_2260 NC_010681.1 2548526 2549566 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A2000 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(2548526..2549566) Burkholderia phytofirmans PsJN 6284717 YP_001895884.1 CDS Bphyt_2261 NC_010681.1 2549734 2550789 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1999 ABC ribose transporter inner membrane subunit; sugar ABC transporter ATPase complement(2549734..2550789) Burkholderia phytofirmans PsJN 6284718 YP_001895885.1 CDS Bphyt_2262 NC_010681.1 2550786 2552384 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A1998 ABC ribose transporter fused ATPases; ABC transporter complement(2550786..2552384) Burkholderia phytofirmans PsJN 6284719 YP_001895886.1 CDS Bphyt_2263 NC_010681.1 2552694 2553656 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A1997 ABC ribose transporter periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator complement(2552694..2553656) Burkholderia phytofirmans PsJN 6283641 YP_001895887.1 CDS Bphyt_2264 NC_010681.1 2554018 2554995 R TIGRFAM: magnesium and cobalt transporter CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: bxe:Bxe_A1996 magnesium and cobalt transporter CorA family; magnesium and cobalt transporter CorA complement(2554018..2554995) Burkholderia phytofirmans PsJN 6283642 YP_001895888.1 CDS Bphyt_2265 NC_010681.1 2555204 2555680 R KEGG: bxe:Bxe_A1995 hypothetical protein; hypothetical protein complement(2555204..2555680) Burkholderia phytofirmans PsJN 6283643 YP_001895889.1 CDS Bphyt_2266 NC_010681.1 2556069 2556218 D TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bxe:Bxe_A1994 hypothetical protein; cyd operon protein YbgT 2556069..2556218 Burkholderia phytofirmans PsJN 6283644 YP_001895890.1 CDS Bphyt_2267 NC_010681.1 2556215 2556832 D KEGG: bxe:Bxe_A1993 predicted P-loop ATPase protein; P-loop ATPase protein 2556215..2556832 Burkholderia phytofirmans PsJN 6283645 YP_001895891.1 CDS Bphyt_2268 NC_010681.1 2556984 2558081 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; TrkA-N domain protein; saccharopine dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bxe:Bxe_A1992 saccharopine dehydrogenase, NAD-binding; saccharopine dehydrogenase complement(2556984..2558081) Burkholderia phytofirmans PsJN 6283646 YP_001895892.1 CDS Bphyt_2269 NC_010681.1 2558305 2558763 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_A1991 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(2558305..2558763) Burkholderia phytofirmans PsJN 6280732 YP_001895893.1 CDS Bphyt_2270 NC_010681.1 2558929 2559813 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1990 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2558929..2559813) Burkholderia phytofirmans PsJN 6280733 YP_001895894.1 CDS Bphyt_2271 NC_010681.1 2560012 2560527 D KEGG: bxe:Bxe_A1989 hypothetical protein; hypothetical protein 2560012..2560527 Burkholderia phytofirmans PsJN 6280734 YP_001895895.1 CDS Bphyt_2272 NC_010681.1 2560826 2561263 D KEGG: bxe:Bxe_A1988 hypothetical protein; hypothetical protein 2560826..2561263 Burkholderia phytofirmans PsJN 6280735 YP_001895896.1 CDS Bphyt_2273 NC_010681.1 2561309 2561677 R KEGG: bxe:Bxe_A1985 hypothetical protein; hypothetical protein complement(2561309..2561677) Burkholderia phytofirmans PsJN 6280736 YP_001895897.1 CDS Bphyt_2274 NC_010681.1 2561832 2562650 R KEGG: bxe:Bxe_A1984 transmembrane lipoprotein; transmembrane lipoprotein complement(2561832..2562650) Burkholderia phytofirmans PsJN 6280737 YP_001895898.1 CDS Bphyt_2275 NC_010681.1 2562722 2563810 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A1983 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(2562722..2563810) Burkholderia phytofirmans PsJN 6280738 YP_001895899.1 CDS Bphyt_2276 NC_010681.1 2563830 2564795 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_A1982 2-ketogluconate 6-phosphate reductase, TkrA; D-isomer specific 2-hydroxyacid dehydrogenase complement(2563830..2564795) Burkholderia phytofirmans PsJN 6283403 YP_001895900.1 CDS Bphyt_2277 NC_010681.1 2564795 2566090 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1981 major facilitator superfamily (MFS) 2-ketogluconate transporter; major facilitator superfamily protein complement(2564795..2566090) Burkholderia phytofirmans PsJN 6283404 YP_001895901.1 CDS Bphyt_2278 NC_010681.1 2566255 2567238 R PFAM: PfkB domain protein; KEGG: bxe:Bxe_A1980 sugar (2-ketogluconate) kinase, PfkB family; PfkB domain-containing protein complement(2566255..2567238) Burkholderia phytofirmans PsJN 6283405 YP_001895902.1 CDS Bphyt_2279 NC_010681.1 2567548 2568438 R PFAM: xylose isomerase; KEGG: bxe:Bxe_A1979 epimerase, KguE-like; xylose isomerase complement(2567548..2568438) Burkholderia phytofirmans PsJN 6283406 YP_001895903.1 CDS Bphyt_2280 NC_010681.1 2568683 2569600 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1978 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2568683..2569600) Burkholderia phytofirmans PsJN 6283407 YP_001895904.1 CDS Bphyt_2281 NC_010681.1 2569722 2570819 D PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A1977 conserved hypothetical protein 698; hypothetical protein 2569722..2570819 Burkholderia phytofirmans PsJN 6283408 YP_001895905.1 CDS Bphyt_2282 NC_010681.1 2571016 2571753 D PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A1976 glutathione S-transferase; glutathione S-transferase 2571016..2571753 Burkholderia phytofirmans PsJN 6283142 YP_001895906.1 CDS Bphyt_2283 NC_010681.1 2571824 2573599 D PFAM: hypothetical protein; chloride channel core; KEGG: bxe:Bxe_A1975 voltage-gated ClC-type chloride channel ClcB; voltage-gated ClC-type chloride channel ClcB 2571824..2573599 Burkholderia phytofirmans PsJN 6283143 YP_001895907.1 CDS Bphyt_2284 NC_010681.1 2573764 2575101 D KEGG: bxe:Bxe_A1974 hypothetical protein; hypothetical protein 2573764..2575101 Burkholderia phytofirmans PsJN 6283144 YP_001895908.1 CDS Bphyt_2285 NC_010681.1 2575379 2575630 D KEGG: bxe:Bxe_A1973 hypothetical protein; hypothetical protein 2575379..2575630 Burkholderia phytofirmans PsJN 6283145 YP_001895909.1 CDS Bphyt_2286 NC_010681.1 2575831 2576061 D KEGG: bxe:Bxe_A1972 hypothetical protein; hypothetical protein 2575831..2576061 Burkholderia phytofirmans PsJN 6283146 YP_001895910.1 CDS Bphyt_2287 NC_010681.1 2576058 2576960 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: pfl:PFL_5197 AraC family transcriptional regulator; AraC family transcriptional regulator 2576058..2576960 Burkholderia phytofirmans PsJN 6283147 YP_001895911.1 CDS Bphyt_2288 NC_010681.1 2577076 2577465 D PFAM: cupin; KEGG: pfl:PFL_5198 hypothetical protein; cupin 2577076..2577465 Burkholderia phytofirmans PsJN 6283148 YP_001895912.1 CDS Bphyt_2289 NC_010681.1 2577593 2578654 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1971 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2577593..2578654) Burkholderia phytofirmans PsJN 6281345 YP_001895913.1 CDS Bphyt_2290 NC_010681.1 2578957 2579169 D KEGG: bxe:Bxe_A1970 hypothetical protein; hypothetical protein 2578957..2579169 Burkholderia phytofirmans PsJN 6281346 YP_001895914.1 CDS Bphyt_2291 NC_010681.1 2579188 2579805 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A1969 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2579188..2579805) Burkholderia phytofirmans PsJN 6281347 YP_001895915.1 CDS Bphyt_2292 NC_010681.1 2580025 2581176 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: bxe:Bxe_A1968 multidrug efflux pump, membrane fusion protein, CzcB subfamily; RND family efflux transporter MFP subunit 2580025..2581176 Burkholderia phytofirmans PsJN 6281348 YP_001895916.1 CDS Bphyt_2293 NC_010681.1 2581173 2584301 D PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A1967 multidrug efflux pump, RND family, AcrB/AcrD/AcrF subfamily; acriflavin resistance protein 2581173..2584301 Burkholderia phytofirmans PsJN 6281349 YP_001895917.1 CDS Bphyt_2294 NC_010681.1 2584304 2585839 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A1966 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein 2584304..2585839 Burkholderia phytofirmans PsJN 6281350 YP_001895918.1 CDS Bphyt_2295 NC_010681.1 2586281 2587216 R acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(2586281..2587216) Burkholderia phytofirmans PsJN 6284496 YP_001895919.1 CDS Bphyt_2296 NC_010681.1 2587535 2590036 R TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bxe:Bxe_A1961 penicillin-binding (peptidoglycan synthetase) transmembrane protein, MrcA; penicillin-binding protein complement(2587535..2590036) Burkholderia phytofirmans PsJN 6284497 YP_001895920.1 CDS Bphyt_2297 NC_010681.1 2590528 2591172 D KEGG: bxe:Bxe_A1960 hypothetical protein; hypothetical protein 2590528..2591172 Burkholderia phytofirmans PsJN 6284498 YP_001895921.1 CDS Bphyt_2298 NC_010681.1 2591750 2592430 D PFAM: PspA/IM30 family protein; KEGG: bxe:Bxe_A1959 phage shock protein A, PspA; phage shock protein A 2591750..2592430 Burkholderia phytofirmans PsJN 6284499 YP_001895922.1 CDS Bphyt_2299 NC_010681.1 2592519 2593736 D PFAM: hypothetical protein; KEGG: bxe:Bxe_A1958 TPR repeat membrane protein; hypothetical protein 2592519..2593736 Burkholderia phytofirmans PsJN 6284500 YP_001895923.1 CDS Bphyt_2300 NC_010681.1 2593841 2594530 R PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A1957 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2593841..2594530) Burkholderia phytofirmans PsJN 6284501 YP_001895924.1 CDS Bphyt_2301 NC_010681.1 2594676 2596166 D KEGG: bxe:Bxe_A1956 flavin-binding monooxygenase-like; flavin-binding monooxygenase-like protein 2594676..2596166 Burkholderia phytofirmans PsJN 6284502 YP_001895925.1 CDS Bphyt_2302 NC_010681.1 2596279 2597268 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1955 alpha/beta hydrolase fold; alpha/beta fold family hydrolase 2596279..2597268 Burkholderia phytofirmans PsJN 6283162 YP_001895926.1 CDS Bphyt_2303 NC_010681.1 2597389 2597505 R hypothetical protein complement(2597389..2597505) Burkholderia phytofirmans PsJN 6283163 YP_001895927.1 CDS Bphyt_2304 NC_010681.1 2597714 2599120 D PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_A1954 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2597714..2599120 Burkholderia phytofirmans PsJN 6283164 YP_001895928.1 CDS Bphyt_2305 NC_010681.1 2599170 2600447 R PFAM: transposase mutator type; KEGG: bcm:Bcenmc03_6788 transposase mutator type; transposase mutator type complement(2599170..2600447) Burkholderia phytofirmans PsJN 6283165 YP_001895929.1 CDS Bphyt_2306 NC_010681.1 2600552 2601370 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A1953 ABC polyamine transporter inner membrane subunit; ornithine carbamoyltransferase complement(2600552..2601370) Burkholderia phytofirmans PsJN 6283166 YP_001895930.1 CDS Bphyt_2307 NC_010681.1 2601370 2602299 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A1952 ABC polyamine transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2601370..2602299) Burkholderia phytofirmans PsJN 6283167 YP_001895931.1 CDS Bphyt_2308 NC_010681.1 2602296 2603462 R KEGG: bxe:Bxe_A1951 ABC polyamine transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase; PFAM: ABC transporter; transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(2602296..2603462) Burkholderia phytofirmans PsJN 6282263 YP_001895932.1 CDS Bphyt_2309 NC_010681.1 2603555 2604655 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A1950 ABC polyamine transporter periplasmic ligand binding protein; family 1 extracellular solute-binding protein complement(2603555..2604655) Burkholderia phytofirmans PsJN 6282264 YP_001895933.1 CDS Bphyt_2310 NC_010681.1 2605132 2606433 D TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bxe:Bxe_A1949 Mn2+/Fe2+ transporters, NRAMP family, MntH; NRAMP family Mn2+/Fe2+ transporter 2605132..2606433 Burkholderia phytofirmans PsJN 6282265 YP_001895934.1 CDS Bphyt_2311 NC_010681.1 2606709 2608037 D KEGG: bxe:Bxe_A1948 outer membrane phospholipase A; outer membrane phospholipase A 2606709..2608037 Burkholderia phytofirmans PsJN 6282266 YP_001895935.1 CDS Bphyt_2312 NC_010681.1 2608204 2608407 D PFAM: protein of unknown function DUF1289; KEGG: bxe:Bxe_A1947 hypothetical protein; hypothetical protein 2608204..2608407 Burkholderia phytofirmans PsJN 6282267 YP_001895936.1 CDS Bphyt_2313 NC_010681.1 2608440 2609108 R PFAM: OmpW family protein; KEGG: bxe:Bxe_A1946 outer membrane protein (porin), OmpW family; OmpW family protein complement(2608440..2609108) Burkholderia phytofirmans PsJN 6282268 YP_001895937.1 CDS Bphyt_2314 NC_010681.1 2609180 2610370 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: bxe:Bxe_A1945 2-nitropropane dioxygenase; 2-nitropropane dioxygenase complement(2609180..2610370) Burkholderia phytofirmans PsJN 6282269 YP_001895938.1 CDS Bphyt_2315 NC_010681.1 2610633 2612225 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A1943 ABC transporter fused ATPases; ABC transporter complement(2610633..2612225) Burkholderia phytofirmans PsJN 6283168 YP_001895939.1 CDS Bphyt_2316 NC_010681.1 2612309 2613376 R PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bte:BTH_I2076 oxidoreductase; 6-phosphogluconate dehydrogenase complement(2612309..2613376) Burkholderia phytofirmans PsJN 6283169 YP_001895940.1 CDS Bphyt_2317 NC_010681.1 2613548 2613754 D PFAM: protein of unknown function DUF1458; KEGG: bxe:Bxe_A1942 hypothetical protein; hypothetical protein 2613548..2613754 Burkholderia phytofirmans PsJN 6283170 YP_001895941.1 CDS Bphyt_2318 NC_010681.1 2613888 2614994 R PFAM: basic membrane lipoprotein; KEGG: bxe:Bxe_A1941 ABC transporter periplasmic ligand binding protein; basic membrane lipoprotein complement(2613888..2614994) Burkholderia phytofirmans PsJN 6283171 YP_001895942.1 CDS Bphyt_2319 NC_010681.1 2615048 2615977 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1940 ABC transporter inner membrane subunit; inner-membrane translocator complement(2615048..2615977) Burkholderia phytofirmans PsJN 6283172 YP_001895943.1 CDS Bphyt_2320 NC_010681.1 2616022 2617128 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1939 ABC transporter inner membrane subunit; inner-membrane translocator complement(2616022..2617128) Burkholderia phytofirmans PsJN 6283173 YP_001895944.1 CDS Bphyt_2321 NC_010681.1 2617204 2618805 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A1938 ABC transporter fused ATPases; ABC transporter complement(2617204..2618805) Burkholderia phytofirmans PsJN 6281240 YP_001895945.1 CDS Bphyt_2322 NC_010681.1 2619056 2619988 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1937 LysR family transcriptional regulator; LysR family transcriptional regulator 2619056..2619988 Burkholderia phytofirmans PsJN 6281241 YP_001895946.1 CDS Bphyt_2323 NC_010681.1 2620043 2621440 R catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase complement(2620043..2621440) Burkholderia phytofirmans PsJN 6281242 YP_001895947.1 CDS Bphyt_2324 NC_010681.1 2621977 2622330 D TIGRFAM: hydroxyisourate hydrolase; PFAM: transthyretin; KEGG: bxe:Bxe_A1934 transthyretin-like protein; hydroxyisourate hydrolase 2621977..2622330 Burkholderia phytofirmans PsJN 6281243 YP_001895948.1 CDS Bphyt_2325 NC_010681.1 2622669 2623862 D PFAM: protein of unknown function DUF989; KEGG: bxe:Bxe_A1932 hypothetical protein; hypothetical protein 2622669..2623862 Burkholderia phytofirmans PsJN 6281244 YP_001895949.1 CDS Bphyt_2326 NC_010681.1 2624298 2624810 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(2624298..2624810) Burkholderia phytofirmans PsJN 6281245 YP_001895950.1 CDS Bphyt_2327 NC_010681.1 2624807 2625820 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(2624807..2625820) Burkholderia phytofirmans PsJN 6281246 YP_001895951.1 CDS Bphyt_2328 NC_010681.1 2625897 2626418 R TIGRFAM: OHCU decarboxylase; KEGG: bxe:Bxe_A1927 hypothetical protein; OHCU decarboxylase complement(2625897..2626418) Burkholderia phytofirmans PsJN 6283439 YP_001895952.1 CDS Bphyt_2329 NC_010681.1 2626415 2627365 R KEGG: bxe:Bxe_A1926 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein complement(2626415..2627365) Burkholderia phytofirmans PsJN 6283440 YP_001895953.1 CDS Bphyt_2330 NC_010681.1 2627605 2628471 R PFAM: Asp/Glu/hydantoin racemase; KEGG: bxe:Bxe_A1925 hydantoin racemase; Asp/Glu/hydantoin racemase complement(2627605..2628471) Burkholderia phytofirmans PsJN 6283441 YP_001895954.1 CDS Bphyt_2331 NC_010681.1 2628498 2629979 R PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bxe:Bxe_A1924 nucleobase/cation symporter, NCS1 family; cytosine/purines uracil thiamine allantoin permease complement(2628498..2629979) Burkholderia phytofirmans PsJN 6283442 YP_001895955.1 CDS Bphyt_2332 NC_010681.1 2630313 2631053 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_A1922 GntR family transcriptional regulator; GntR family transcriptional regulator complement(2630313..2631053) Burkholderia phytofirmans PsJN 6283443 YP_001895956.1 CDS ldcA NC_010681.1 2631368 2632294 R catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A complement(2631368..2632294) Burkholderia phytofirmans PsJN 6283444 YP_001895957.1 CDS Bphyt_2334 NC_010681.1 2632323 2632838 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bxe:Bxe_A1920 cytidine/deoxycytidylate deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase complement(2632323..2632838) Burkholderia phytofirmans PsJN 6284772 YP_001895958.1 CDS Bphyt_2335 NC_010681.1 2633057 2633458 R KEGG: bxe:Bxe_A1919 hypothetical protein; hypothetical protein complement(2633057..2633458) Burkholderia phytofirmans PsJN 6284773 YP_001895959.1 CDS Bphyt_2336 NC_010681.1 2633720 2633965 D hypothetical protein 2633720..2633965 Burkholderia phytofirmans PsJN 6284774 YP_001895960.1 CDS Bphyt_2337 NC_010681.1 2634009 2634614 R PFAM: phosphoesterase HXTX; KEGG: bxe:Bxe_A1918 ligase; phosphoesterase HXTX complement(2634009..2634614) Burkholderia phytofirmans PsJN 6284775 YP_001895961.1 CDS Bphyt_2338 NC_010681.1 2634944 2636152 D PFAM: radical SAM protein; KEGG: psa:PST_3962 elongator protein; radical SAM protein 2634944..2636152 Burkholderia phytofirmans PsJN 6284776 YP_001895962.1 CDS Bphyt_2339 NC_010681.1 2636162 2637637 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily; KEGG: bxe:Bxe_B2228 hypothetical protein; phage SPO1 DNA polymerase-like protein 2636162..2637637 Burkholderia phytofirmans PsJN 6284777 YP_001895963.1 CDS Bphyt_2340 NC_010681.1 2637846 2638361 R PFAM: OsmC family protein; KEGG: bur:Bcep18194_B0089 OsmC-like protein; OsmC family protein complement(2637846..2638361) Burkholderia phytofirmans PsJN 6284778 YP_001895964.1 CDS Bphyt_2341 NC_010681.1 2638385 2639140 R PFAM: NmrA family protein; KEGG: bch:Bcen2424_5604 NmrA family protein; NmrA family protein complement(2638385..2639140) Burkholderia phytofirmans PsJN 6280865 YP_001895965.1 CDS Bphyt_2342 NC_010681.1 2639421 2640455 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0091 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2639421..2640455) Burkholderia phytofirmans PsJN 6280866 YP_001895966.1 CDS Bphyt_2343 NC_010681.1 2640533 2640952 R PFAM: cupin; KEGG: bcm:Bcenmc03_4626 cupin 2 conserved barrel domain protein; cupin complement(2640533..2640952) Burkholderia phytofirmans PsJN 6280867 YP_001895967.1 CDS Bphyt_2344 NC_010681.1 2641022 2641501 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: bch:Bcen2424_5601 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase complement(2641022..2641501) Burkholderia phytofirmans PsJN 6280868 YP_001895968.1 CDS Bphyt_2345 NC_010681.1 2641686 2642567 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_B0094 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 subunit complement(2641686..2642567) Burkholderia phytofirmans PsJN 6280869 YP_001895969.1 CDS Bphyt_2346 NC_010681.1 2642579 2643016 R KEGG: pde:Pden_2738 chromosome segregation protein SMC; hypothetical protein complement(2642579..2643016) Burkholderia phytofirmans PsJN 6280870 YP_001895970.1 CDS Bphyt_2347 NC_010681.1 2643302 2643826 R KEGG: bxe:Bxe_A1838 hypothetical protein; hypothetical protein complement(2643302..2643826) Burkholderia phytofirmans PsJN 6281332 YP_001895971.1 CDS Bphyt_2348 NC_010681.1 2643957 2644883 D PFAM: protein of unknown function DUF72; KEGG: bmu:Bmul_4213 protein of unknown function DUF72; hypothetical protein 2643957..2644883 Burkholderia phytofirmans PsJN 6281333 YP_001895972.1 CDS Bphyt_2350 NC_010681.1 2645300 2645899 D PFAM: ParB-like nuclease; KEGG: bra:BRADO4673 hypothetical protein; ParB-like nuclease 2645300..2645899 Burkholderia phytofirmans PsJN 6281335 YP_001895973.1 CDS Bphyt_2351 NC_010681.1 2645970 2646650 D KEGG: bxe:Bxe_C1289 hypothetical protein; hypothetical protein 2645970..2646650 Burkholderia phytofirmans PsJN 6281336 YP_001895974.1 CDS Bphyt_2352 NC_010681.1 2646742 2647659 D PFAM: ribonuclease BN; KEGG: bxe:Bxe_C1291 ribonuclease BN; ribonuclease BN 2646742..2647659 Burkholderia phytofirmans PsJN 6281337 YP_001895975.1 CDS Bphyt_2353 NC_010681.1 2647851 2648114 R KEGG: bvi:Bcep1808_5889 hypothetical protein; hypothetical protein complement(2647851..2648114) Burkholderia phytofirmans PsJN 6281338 YP_001895976.1 CDS Bphyt_2354 NC_010681.1 2648676 2649020 D KEGG: bxe:Bxe_B2334 hypothetical protein; hypothetical protein 2648676..2649020 Burkholderia phytofirmans PsJN 6284259 YP_001895977.1 CDS Bphyt_2355 NC_010681.1 2649095 2649757 R KEGG: bxe:Bxe_C1280 protein-L-isoaspartate (D-aspartate) O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(2649095..2649757) Burkholderia phytofirmans PsJN 6284260 YP_001895978.1 CDS Bphyt_2356 NC_010681.1 2650038 2650196 R hypothetical protein complement(2650038..2650196) Burkholderia phytofirmans PsJN 6284261 YP_001895979.1 CDS Bphyt_2357 NC_010681.1 2650189 2650611 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_2823 acetoacetyl-CoA reductase; short-chain dehydrogenase/reductase SDR complement(2650189..2650611) Burkholderia phytofirmans PsJN 6284262 YP_001895980.1 CDS Bphyt_2358 NC_010681.1 2650769 2651335 R TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bte:BTH_I1867 phasin family protein; phasin family protein complement(2650769..2651335) Burkholderia phytofirmans PsJN 6284263 YP_001895981.1 CDS Bphyt_2359 NC_010681.1 2651570 2651767 R KEGG: bmn:BMA10247_2613 hypothetical protein; hypothetical protein complement(2651570..2651767) Burkholderia phytofirmans PsJN 6284264 YP_001895982.1 CDS Bphyt_2360 NC_010681.1 2652774 2653061 D KEGG: bam:Bamb_6398 hypothetical protein; hypothetical protein 2652774..2653061 Burkholderia phytofirmans PsJN 6282624 YP_001895983.1 CDS Bphyt_2361 NC_010681.1 2653309 2653581 R KEGG: bmu:Bmul_4685 hypothetical protein; hypothetical protein complement(2653309..2653581) Burkholderia phytofirmans PsJN 6282625 YP_001895984.1 CDS Bphyt_2362 NC_010681.1 2653802 2654521 D KEGG: mmr:Mmar10_1174 hypothetical protein; hypothetical protein 2653802..2654521 Burkholderia phytofirmans PsJN 6282626 YP_001895985.1 CDS Bphyt_2363 NC_010681.1 2654752 2656233 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bte:BTH_I0948 EAL/GGDEF domain protein; diguanylate cyclase complement(2654752..2656233) Burkholderia phytofirmans PsJN 6282627 YP_001895986.1 CDS Bphyt_2364 NC_010681.1 2657104 2658531 R PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bur:Bcep18194_C6996 cytosine/purines, uracil, thiamine, allantoin transporter; cytosine/purines uracil thiamine allantoin permease complement(2657104..2658531) Burkholderia phytofirmans PsJN 6282628 YP_001895987.1 CDS Bphyt_2365 NC_010681.1 2658678 2659841 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase complement(2658678..2659841) Burkholderia phytofirmans PsJN 6282629 YP_001895988.1 CDS Bphyt_2366 NC_010681.1 2659834 2660511 R PFAM: protein of unknown function DUF1028; KEGG: bxe:Bxe_A3464 hypothetical protein; hypothetical protein complement(2659834..2660511) Burkholderia phytofirmans PsJN 6282630 YP_001895989.1 CDS Bphyt_2367 NC_010681.1 2660522 2660959 R PFAM: endoribonuclease L-PSP; KEGG: bxe:Bxe_A3465 hypothetical protein; endoribonuclease L-PSP complement(2660522..2660959) Burkholderia phytofirmans PsJN 6283391 YP_001895990.1 CDS Bphyt_2368 NC_010681.1 2661014 2662363 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_A3466 hypothetical protein; FAD dependent oxidoreductase complement(2661014..2662363) Burkholderia phytofirmans PsJN 6283392 YP_001895991.1 CDS Bphyt_2369 NC_010681.1 2662654 2663580 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A3467 LysR family transcriptional regulator; LysR family transcriptional regulator 2662654..2663580 Burkholderia phytofirmans PsJN 6283393 YP_001895992.1 CDS Bphyt_2370 NC_010681.1 2663764 2664927 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_A3468 iron-sulphur Rieske protein; Rieske (2Fe-2S) domain-containing protein 2663764..2664927 Burkholderia phytofirmans PsJN 6283394 YP_001895993.1 CDS Bphyt_2371 NC_010681.1 2664959 2666140 D KEGG: bxe:Bxe_A3469 ABC spermidine/putrescine transporter ATPase; TIGRFAM: spermidine/putrescine ABC transporter ATPase; PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: ATPase AAA; spermidine/putrescine ABC transporter ATPase 2664959..2666140 Burkholderia phytofirmans PsJN 6283395 YP_001895994.1 CDS Bphyt_2372 NC_010681.1 2666142 2667197 D PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A3470 ABC spermidine/putrescine transporter periplasmic ligand binding protein; family 1 extracellular solute-binding protein 2666142..2667197 Burkholderia phytofirmans PsJN 6283396 YP_001895995.1 CDS Bphyt_2373 NC_010681.1 2667235 2668488 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A3471 ABC spermidine/putrescine transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2667235..2668488 Burkholderia phytofirmans PsJN 6281127 YP_001895996.1 CDS Bphyt_2374 NC_010681.1 2668515 2669327 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A3472 ABC spermidine/putrescine transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2668515..2669327 Burkholderia phytofirmans PsJN 6281128 YP_001895997.1 CDS Bphyt_2375 NC_010681.1 2669391 2669840 R KEGG: bmu:Bmul_2917 hypothetical protein; hypothetical protein complement(2669391..2669840) Burkholderia phytofirmans PsJN 6281129 YP_001895998.1 CDS Bphyt_2376 NC_010681.1 2669957 2671036 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bbt:BBta_2629 helix-turn-helix, AraC type regulator; AraC family transcriptional regulator complement(2669957..2671036) Burkholderia phytofirmans PsJN 6281130 YP_001895999.1 CDS Bphyt_2377 NC_010681.1 2671180 2671296 D hypothetical protein 2671180..2671296 Burkholderia phytofirmans PsJN 6281131 YP_001896000.1 CDS Bphyt_2378 NC_010681.1 2671342 2672112 D PFAM: enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_2630 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2671342..2672112 Burkholderia phytofirmans PsJN 6281132 YP_001896001.1 CDS Bphyt_2379 NC_010681.1 2672115 2673344 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbt:BBta_2631 formyl-coenzyme A transferase, L-carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 2672115..2673344 Burkholderia phytofirmans PsJN 6281133 YP_001896002.1 CDS Bphyt_2380 NC_010681.1 2673401 2674723 D KEGG: dac:Daci_2036 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate hydrolase; Domain of unknown function DUF1969; fumarylacetoacetase 2673401..2674723 Burkholderia phytofirmans PsJN 6282366 YP_001896003.1 CDS Bphyt_2381 NC_010681.1 2674777 2675151 D KEGG: chy:CHY_2034 hypothetical protein; hypothetical protein 2674777..2675151 Burkholderia phytofirmans PsJN 6282367 YP_001896004.1 CDS Bphyt_2382 NC_010681.1 2675144 2676730 D PFAM: Na+/solute symporter; KEGG: sma:SAV2436 sodium:solute symporter; Na+/solute symporter 2675144..2676730 Burkholderia phytofirmans PsJN 6282368 YP_001896005.1 CDS Bphyt_2383 NC_010681.1 2676842 2677369 D KEGG: mrd:Mrad2831_4742 hypothetical protein; hypothetical protein 2676842..2677369 Burkholderia phytofirmans PsJN 6282369 YP_001896006.1 CDS Bphyt_2385 NC_010681.1 2677721 2678692 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_5146 LysR family transcriptional regulator; LysR family transcriptional regulator 2677721..2678692 Burkholderia phytofirmans PsJN 6282371 YP_001896007.1 CDS Bphyt_2386 NC_010681.1 2678838 2679863 D PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: oan:Oant_1070 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase zinc-binding domain-containing protein 2678838..2679863 Burkholderia phytofirmans PsJN 6284203 YP_001896008.1 CDS Bphyt_2387 NC_010681.1 2680008 2681459 R PFAM: amidohydrolase; amidohydrolase; KEGG: bur:Bcep18194_B2475 amidohydrolase; amidohydrolase complement(2680008..2681459) Burkholderia phytofirmans PsJN 6284204 YP_001896009.1 CDS Bphyt_2388 NC_010681.1 2681505 2682710 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(2681505..2682710) Burkholderia phytofirmans PsJN 6284205 YP_001896010.1 CDS Bphyt_2389 NC_010681.1 2682707 2684185 R PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_B2476 Na+/solute symporter; Na+/solute symporter complement(2682707..2684185) Burkholderia phytofirmans PsJN 6284206 YP_001896011.1 CDS Bphyt_2390 NC_010681.1 2684182 2684400 R KEGG: bur:Bcep18194_B2477 hypothetical protein; hypothetical protein complement(2684182..2684400) Burkholderia phytofirmans PsJN 6284207 YP_001896012.1 CDS Bphyt_2391 NC_010681.1 2684693 2685574 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_3226 LysR family transcriptional regulator; LysR family transcriptional regulator 2684693..2685574 Burkholderia phytofirmans PsJN 6284208 YP_001896013.1 CDS Bphyt_2392 NC_010681.1 2685663 2686430 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2664 short-chain type dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(2685663..2686430) Burkholderia phytofirmans PsJN 6284209 YP_001896014.1 CDS Bphyt_2393 NC_010681.1 2686636 2687550 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B2666 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2686636..2687550) Burkholderia phytofirmans PsJN 6282667 YP_001896015.1 CDS Bphyt_2394 NC_010681.1 2687637 2688359 R PFAM: OmpA/MotB domain protein; KEGG: bpd:BURPS668_1566 outer membrane protein, OmpA family; OmpA/MotB domain-containing protein complement(2687637..2688359) Burkholderia phytofirmans PsJN 6282668 YP_001896016.1 CDS Bphyt_2395 NC_010681.1 2688439 2694864 R PFAM: Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: mlo:mll2848 hypothetical protein; Haemagluttinin domain-containing protein complement(2688439..2694864) Burkholderia phytofirmans PsJN 6282669 YP_001896017.1 CDS Bphyt_2396 NC_010681.1 2695817 2697784 R PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bur:Bcep18194_B0323 YadA-like haemagluttinin; YadA domain-containing protein complement(2695817..2697784) Burkholderia phytofirmans PsJN 6282670 YP_001896018.1 CDS Bphyt_2397 NC_010681.1 2698148 2698957 D PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: bam:Bamb_6368 two component AraC family transcriptional regulator; AraC family transcriptional regulator 2698148..2698957 Burkholderia phytofirmans PsJN 6282671 YP_001896019.1 CDS Bphyt_2398 NC_010681.1 2698965 2701286 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor extracellular region 2; KEGG: bam:Bamb_6197 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2698965..2701286 Burkholderia phytofirmans PsJN 6282672 YP_001896020.1 CDS Bphyt_2399 NC_010681.1 2701484 2703673 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bam:Bamb_1541 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 2701484..2703673 Burkholderia phytofirmans PsJN 6282249 YP_001896021.1 CDS Bphyt_2400 NC_010681.1 2703789 2704361 R PFAM: PEBP family protein; KEGG: bam:Bamb_3837 YbhB and YbcL; PEBP family protein complement(2703789..2704361) Burkholderia phytofirmans PsJN 6282250 YP_001896022.1 CDS Bphyt_2402 NC_010681.1 2704918 2705790 D KEGG: ava:Ava_C0154 hypothetical protein; hypothetical protein 2704918..2705790 Burkholderia phytofirmans PsJN 6282252 YP_001896023.1 CDS Bphyt_2403 NC_010681.1 2706160 2706660 D PFAM: OsmC family protein; KEGG: bam:Bamb_5789 OsmC family protein; OsmC family protein 2706160..2706660 Burkholderia phytofirmans PsJN 6282253 YP_001896024.1 CDS Bphyt_2404 NC_010681.1 2707042 2707332 R hypothetical protein complement(2707042..2707332) Burkholderia phytofirmans PsJN 6282254 YP_001896025.1 CDS Bphyt_2405 NC_010681.1 2707357 2708394 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5786 LysR family transcriptional regulator; LysR family transcriptional regulator 2707357..2708394 Burkholderia phytofirmans PsJN 6282255 YP_001896026.1 CDS Bphyt_2406 NC_010681.1 2708633 2709007 D PFAM: response regulator receiver; KEGG: bxe:Bxe_A2885 response regulator receiver domain protein(CheY); response regulator receiver protein 2708633..2709007 Burkholderia phytofirmans PsJN 6283814 YP_001896027.1 CDS Bphyt_2407 NC_010681.1 2709052 2709714 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bpt:Bpet3928 two component response regulator; LuxR family transcriptional regulator complement(2709052..2709714) Burkholderia phytofirmans PsJN 6283815 YP_001896028.1 CDS Bphyt_2408 NC_010681.1 2710206 2710925 R PFAM: regulatory protein TetR; KEGG: aba:acid345_0300 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2710206..2710925) Burkholderia phytofirmans PsJN 6283816 YP_001896029.1 CDS Bphyt_2409 NC_010681.1 2711417 2712421 R KEGG: bxe:Bxe_B2986 DedA protein; DedA protein complement(2711417..2712421) Burkholderia phytofirmans PsJN 6283817 YP_001896030.1 CDS Bphyt_2410 NC_010681.1 2712602 2713873 R PFAM: patatin; KEGG: bvi:Bcep1808_3779 patatin; patatin complement(2712602..2713873) Burkholderia phytofirmans PsJN 6283818 YP_001896031.1 CDS Bphyt_2411 NC_010681.1 2713884 2714666 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(2713884..2714666) Burkholderia phytofirmans PsJN 6283819 YP_001896032.1 CDS Bphyt_2412 NC_010681.1 2714685 2715464 R converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase complement(2714685..2715464) Burkholderia phytofirmans PsJN 6283357 YP_001896033.1 CDS Bphyt_2413 NC_010681.1 2715706 2716509 R KEGG: bvi:Bcep1808_3952 hypothetical protein; hypothetical protein complement(2715706..2716509) Burkholderia phytofirmans PsJN 6283358 YP_001896034.1 CDS Bphyt_2414 NC_010681.1 2716621 2717628 R KEGG: bam:Bamb_5790 membrane protein-like protein; hypothetical protein complement(2716621..2717628) Burkholderia phytofirmans PsJN 6283359 YP_001896035.1 CDS Bphyt_2415 NC_010681.1 2717837 2719390 R TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5791 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter complement(2717837..2719390) Burkholderia phytofirmans PsJN 6283360 YP_001896036.1 CDS Bphyt_2416 NC_010681.1 2719495 2720808 R PFAM: secretion protein HlyD; KEGG: rme:Rmet_4314 secretion protein HlyD; secretion protein HlyD complement(2719495..2720808) Burkholderia phytofirmans PsJN 6283361 YP_001896037.1 CDS Bphyt_2417 NC_010681.1 2720843 2722942 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_C6204 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(2720843..2722942) Burkholderia phytofirmans PsJN 6283362 YP_001896038.1 CDS Bphyt_2418 NC_010681.1 2723061 2723162 R hypothetical protein complement(2723061..2723162) Burkholderia phytofirmans PsJN 6283363 YP_001896039.1 CDS Bphyt_2419 NC_010681.1 2723595 2724074 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: bcm:Bcenmc03_4627 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase 2723595..2724074 Burkholderia phytofirmans PsJN 6283156 YP_001896040.1 CDS Bphyt_2420 NC_010681.1 2724144 2724551 D PFAM: cupin; KEGG: bch:Bcen2424_5602 cupin 2, conserved barrel domain protein; cupin 2724144..2724551 Burkholderia phytofirmans PsJN 6283157 YP_001896041.1 CDS Bphyt_2421 NC_010681.1 2724731 2725939 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reh:H16_A1765 dehydrogenase, oxidoreductase FAD flavoprotein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2724731..2725939 Burkholderia phytofirmans PsJN 6283158 YP_001896042.1 CDS Bphyt_2422 NC_010681.1 2726002 2726139 D hypothetical protein 2726002..2726139 Burkholderia phytofirmans PsJN 6283159 YP_001896043.1 CDS Bphyt_2423 NC_010681.1 2726641 2727678 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5786 LysR family transcriptional regulator; LysR family transcriptional regulator 2726641..2727678 Burkholderia phytofirmans PsJN 6283160 YP_001896044.1 CDS Bphyt_2424 NC_010681.1 2727810 2728463 R KEGG: bja:bll5679 hypothetical protein; hypothetical protein complement(2727810..2728463) Burkholderia phytofirmans PsJN 6283161 YP_001896045.1 CDS Bphyt_2425 NC_010681.1 2728958 2729575 D hypothetical protein 2728958..2729575 Burkholderia phytofirmans PsJN 6281044 YP_001896046.1 CDS Bphyt_2426 NC_010681.1 2729572 2730804 D PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: bcm:Bcenmc03_3041 flagellar basal body FlaE domain protein; flagellar basal body FlaE domain-containing protein 2729572..2730804 Burkholderia phytofirmans PsJN 6281045 YP_001896047.1 CDS Bphyt_2427 NC_010681.1 2730945 2732000 R KEGG: bxe:Bxe_A1329 ABC sugar transporter periplasmic ligand binding protein; sugar ABC transporter substrate-binding protein complement(2730945..2732000) Burkholderia phytofirmans PsJN 6281046 YP_001896048.1 CDS Bphyt_2428 NC_010681.1 2732390 2737903 D KEGG: bpt:Bpet3930 serine/threonine kinase with two-component sensor domain; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; SMART: PAS domain containing protein; serine/threonine protein kinase; PAS sensor protein 2732390..2737903 Burkholderia phytofirmans PsJN 6281047 YP_001896049.1 CDS guaA NC_010681.1 2738178 2739761 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(2738178..2739761) Burkholderia phytofirmans PsJN 6281048 YP_001896050.1 CDS Bphyt_2430 NC_010681.1 2739965 2740702 R KEGG: bxe:Bxe_A1707 hypothetical protein; hypothetical protein complement(2739965..2740702) Burkholderia phytofirmans PsJN 6281049 YP_001896051.1 CDS Bphyt_2431 NC_010681.1 2740709 2742169 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(2740709..2742169) Burkholderia phytofirmans PsJN 6281050 YP_001896052.1 CDS Bphyt_2432 NC_010681.1 2742442 2743419 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A1705 10 TMS drug/metabolite exporter, DME family, DMT super family; hypothetical protein 2742442..2743419 Burkholderia phytofirmans PsJN 6284171 YP_001896053.1 CDS Bphyt_2433 NC_010681.1 2743461 2743793 R PFAM: protein of unknown function UPF0125; KEGG: bxe:Bxe_A1704 hypothetical protein; hypothetical protein complement(2743461..2743793) Burkholderia phytofirmans PsJN 6284172 YP_001896054.1 CDS Bphyt_2434 NC_010681.1 2743790 2744227 R PFAM: cyclase/dehydrase; KEGG: bxe:Bxe_A1703 hypothetical protein; cyclase/dehydrase complement(2743790..2744227) Burkholderia phytofirmans PsJN 6284173 YP_001896055.1 CDS smpB NC_010681.1 2744328 2744774 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2744328..2744774 Burkholderia phytofirmans PsJN 6284174 YP_001896056.1 CDS Bphyt_2436 NC_010681.1 2745185 2746117 R PFAM: band 7 protein; KEGG: bxe:Bxe_A1701 hypothetical protein; hypothetical protein complement(2745185..2746117) Burkholderia phytofirmans PsJN 6284175 YP_001896057.1 CDS Bphyt_2437 NC_010681.1 2746179 2746634 R PFAM: protein of unknown function DUF107; KEGG: bxe:Bxe_A1700 hypothetical protein; hypothetical protein complement(2746179..2746634) Burkholderia phytofirmans PsJN 6284176 YP_001896058.1 CDS Bphyt_2438 NC_010681.1 2746801 2749206 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(2746801..2749206) Burkholderia phytofirmans PsJN 6284038 YP_001896059.1 CDS Bphyt_2439 NC_010681.1 2749721 2750536 D PFAM: protein of unknown function DUF299; KEGG: bxe:Bxe_A1698 hypothetical protein; hypothetical protein 2749721..2750536 Burkholderia phytofirmans PsJN 6284039 YP_001896060.1 CDS Bphyt_2440 NC_010681.1 2750697 2751524 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bxe:Bxe_A1697 RNA methylase; tRNA/rRNA methyltransferase SpoU complement(2750697..2751524) Burkholderia phytofirmans PsJN 6284040 YP_001896061.1 CDS rnhB NC_010681.1 2751556 2752302 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(2751556..2752302) Burkholderia phytofirmans PsJN 6284041 YP_001896062.1 CDS lpxB NC_010681.1 2752299 2753468 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(2752299..2753468) Burkholderia phytofirmans PsJN 6284042 YP_001896063.1 CDS Bphyt_2443 NC_010681.1 2753472 2754260 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(2753472..2754260) Burkholderia phytofirmans PsJN 6284043 YP_001896064.1 CDS fabZ NC_010681.1 2754389 2754853 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(2754389..2754853) Burkholderia phytofirmans PsJN 6284044 YP_001896065.1 CDS lpxD NC_010681.1 2755063 2756175 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(2755063..2756175) Burkholderia phytofirmans PsJN 6282076 YP_001896066.1 CDS Bphyt_2446 NC_010681.1 2756263 2756790 R PFAM: outer membrane chaperone Skp (OmpH); KEGG: bxe:Bxe_A1691 outer membrane protein (OmpH-like); outer membrane chaperone Skp complement(2756263..2756790) Burkholderia phytofirmans PsJN 6282077 YP_001896067.1 CDS Bphyt_2447 NC_010681.1 2756846 2759158 R TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bxe:Bxe_A1690 outer membrane antigen; outer membrane protein assembly complex, YaeT protein complement(2756846..2759158) Burkholderia phytofirmans PsJN 6282078 YP_001896068.1 CDS Bphyt_2448 NC_010681.1 2759226 2760611 R TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: bxe:Bxe_A1689 peptidase M50, membrane-associated zinc metallopeptidase; membrane-associated zinc metalloprotease complement(2759226..2760611) Burkholderia phytofirmans PsJN 6282079 YP_001896069.1 CDS Bphyt_2449 NC_010681.1 2760619 2761824 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2760619..2761824) Burkholderia phytofirmans PsJN 6282080 YP_001896070.1 CDS Bphyt_2450 NC_010681.1 2761835 2762656 R PFAM: phosphatidate cytidylyltransferase; KEGG: bxe:Bxe_A1687 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(2761835..2762656) Burkholderia phytofirmans PsJN 6282081 YP_001896071.1 CDS Bphyt_2451 NC_010681.1 2762650 2763432 R KEGG: bxe:Bxe_A1686 di-trans-poly-cis-decaprenylcistransferase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(2762650..2763432) Burkholderia phytofirmans PsJN 6282459 YP_001896072.1 CDS frr NC_010681.1 2763497 2764057 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2763497..2764057) Burkholderia phytofirmans PsJN 6282460 YP_001896073.1 CDS pyrH NC_010681.1 2764158 2764871 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2764158..2764871) Burkholderia phytofirmans PsJN 6282461 YP_001896074.1 CDS tsf NC_010681.1 2765091 2765972 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2765091..2765972) Burkholderia phytofirmans PsJN 6282462 YP_001896075.1 CDS rpsB NC_010681.1 2766177 2766929 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2766177..2766929) Burkholderia phytofirmans PsJN 6282463 YP_001896076.1 CDS Bphyt_2456 NC_010681.1 2767393 2768202 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 2767393..2768202 Burkholderia phytofirmans PsJN 6282464 YP_001896077.1 CDS Bphyt_2457 NC_010681.1 2768233 2770812 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 2768233..2770812 Burkholderia phytofirmans PsJN 6282465 YP_001896078.1 CDS Bphyt_2458 NC_010681.1 2770961 2772352 D KEGG: lma:LmjF35.0290 hypothetical protein, conserved; hypothetical protein 2770961..2772352 Burkholderia phytofirmans PsJN 6281895 YP_001896079.1 CDS Bphyt_2459 NC_010681.1 2772331 2773083 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bxe:Bxe_A1678 pseudouridine synthase, Rsu; RNA-binding S4 domain-containing protein 2772331..2773083 Burkholderia phytofirmans PsJN 6281896 YP_001896080.1 CDS Bphyt_2460 NC_010681.1 2773212 2773745 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(2773212..2773745) Burkholderia phytofirmans PsJN 6281897 YP_001896081.1 CDS Bphyt_2461 NC_010681.1 2773742 2775808 R KEGG: bxe:Bxe_A1676 NAD-dependent DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: hypothetical protein; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; NAD-dependent DNA ligase complement(2773742..2775808) Burkholderia phytofirmans PsJN 6281898 YP_001896082.1 CDS Bphyt_2462 NC_010681.1 2775999 2777288 R SMART: ZipA FtsZ-binding region; KEGG: bxe:Bxe_A1675 hypothetical protein; FtsZ-binding protein ZipA complement(2775999..2777288) Burkholderia phytofirmans PsJN 6281899 YP_001896083.1 CDS Bphyt_2463 NC_010681.1 2777405 2781001 R TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: bxe:Bxe_A1674 chromosome segregation protein SMC; chromosome segregation protein SMC complement(2777405..2781001) Burkholderia phytofirmans PsJN 6281900 YP_001896084.1 CDS Bphyt_2464 NC_010681.1 2781072 2782067 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A1673 10 TMS drug/metabolite exporter, DME family, DMT super family; hypothetical protein complement(2781072..2782067) Burkholderia phytofirmans PsJN 6283308 YP_001896085.1 CDS Bphyt_2465 NC_010681.1 2782064 2782378 R hypothetical protein complement(2782064..2782378) Burkholderia phytofirmans PsJN 6283309 YP_001896086.1 CDS Bphyt_2466 NC_010681.1 2782750 2783967 D catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2782750..2783967 Burkholderia phytofirmans PsJN 6283310 YP_001896087.1 CDS dapD NC_010681.1 2784038 2784865 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2784038..2784865 Burkholderia phytofirmans PsJN 6283311 YP_001896088.1 CDS Bphyt_2468 NC_010681.1 2784865 2785230 D PFAM: arsenate reductase; KEGG: bxe:Bxe_A1669 conserved hypothetical protein ArsC-like; arsenate reductase 2784865..2785230 Burkholderia phytofirmans PsJN 6283312 YP_001896089.1 CDS Bphyt_2469 NC_010681.1 2785474 2786613 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2785474..2786613 Burkholderia phytofirmans PsJN 6283313 YP_001896090.1 CDS Bphyt_2470 NC_010681.1 2786630 2787514 D involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2786630..2787514 Burkholderia phytofirmans PsJN 6283314 YP_001896091.1 CDS cls NC_010681.1 2787907 2789358 D catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2787907..2789358 Burkholderia phytofirmans PsJN 6284533 YP_001896092.1 CDS Bphyt_2472 NC_010681.1 2789370 2789849 R PFAM: glutathione peroxidase; KEGG: bxe:Bxe_A1665 glutathione peroxidase; glutathione peroxidase complement(2789370..2789849) Burkholderia phytofirmans PsJN 6284534 YP_001896093.1 CDS Bphyt_2473 NC_010681.1 2789984 2791936 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A1664 ABC transporter dulicated ATPases; ABC transporter 2789984..2791936 Burkholderia phytofirmans PsJN 6284535 YP_001896094.1 CDS Bphyt_2474 NC_010681.1 2792010 2793323 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A1663 alpha-methylacyl-CoA racemase; L-carnitine dehydratase/bile acid-inducible protein F 2792010..2793323 Burkholderia phytofirmans PsJN 6284536 YP_001896095.1 CDS Bphyt_2475 NC_010681.1 2793546 2793824 R KEGG: bxe:Bxe_A1662 hypothetical protein; hypothetical protein complement(2793546..2793824) Burkholderia phytofirmans PsJN 6284537 YP_001896096.1 CDS Bphyt_2476 NC_010681.1 2793968 2795344 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(2793968..2795344) Burkholderia phytofirmans PsJN 6284538 YP_001896097.1 CDS alr NC_010681.1 2795435 2796505 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(2795435..2796505) Burkholderia phytofirmans PsJN 6283993 YP_001896098.1 CDS Bphyt_2478 NC_010681.1 2796727 2798034 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1659 hypothetical protein; lysophospholipid transporter LplT 2796727..2798034 Burkholderia phytofirmans PsJN 6283994 YP_001896099.1 CDS Bphyt_2479 NC_010681.1 2798094 2798900 D KEGG: bxe:Bxe_A1658 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 2798094..2798900 Burkholderia phytofirmans PsJN 6283995 YP_001896100.1 CDS Bphyt_2480 NC_010681.1 2799147 2800160 R PFAM: Domain of unknown function DUF1853; KEGG: bxe:Bxe_A1657 hypothetical protein; hypothetical protein complement(2799147..2800160) Burkholderia phytofirmans PsJN 6283996 YP_001896101.1 CDS Bphyt_2481 NC_010681.1 2800157 2801401 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily; KEGG: bxe:Bxe_A1656 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein complement(2800157..2801401) Burkholderia phytofirmans PsJN 6283997 YP_001896102.1 CDS Bphyt_2482 NC_010681.1 2801388 2801882 R TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A1655 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(2801388..2801882) Burkholderia phytofirmans PsJN 6283998 YP_001896103.1 CDS Bphyt_2483 NC_010681.1 2801879 2802709 R PFAM: peptidase M22 glycoprotease; KEGG: bxe:Bxe_A1654 peptidase M22, glycoprotease; peptidase M22 glycoprotease complement(2801879..2802709) Burkholderia phytofirmans PsJN 6283999 YP_001896104.1 CDS Bphyt_2484 NC_010681.1 2803270 2803539 D PFAM: acyl-coA-binding protein ACBP; KEGG: bxe:Bxe_A1653 acyl-CoA-binding protein; acyl-coA-binding protein ACBP 2803270..2803539 Burkholderia phytofirmans PsJN 6284290 YP_001896105.1 CDS Bphyt_2485 NC_010681.1 2804067 2805695 D PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_A1652 ATP-dependent RNA helicase; DEAD/DEAH box helicase 2804067..2805695 Burkholderia phytofirmans PsJN 6284291 YP_001896106.1 CDS Bphyt_2486 NC_010681.1 2806154 2807458 D TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: bxe:Bxe_A1651 isocitrate lyase; isocitrate lyase 2806154..2807458 Burkholderia phytofirmans PsJN 6284292 YP_001896107.1 CDS Bphyt_2487 NC_010681.1 2807708 2808142 R PFAM: UspA domain protein; KEGG: bxe:Bxe_A1650 universal stress protein; UspA domain-containing protein complement(2807708..2808142) Burkholderia phytofirmans PsJN 6284293 YP_001896108.1 CDS Bphyt_2488 NC_010681.1 2808325 2809227 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1649 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2808325..2809227) Burkholderia phytofirmans PsJN 6284294 YP_001896109.1 CDS Bphyt_2489 NC_010681.1 2809379 2810194 D KEGG: bxe:Bxe_A1648 HAD-superfamily hydrolase, subfamily IA, variant2; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase 2809379..2810194 Burkholderia phytofirmans PsJN 6284295 YP_001896110.1 CDS Bphyt_2490 NC_010681.1 2810278 2811888 D Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 2810278..2811888 Burkholderia phytofirmans PsJN 6284410 YP_001896111.1 CDS Bphyt_2491 NC_010681.1 2812063 2812464 R PFAM: AIG2 family protein; KEGG: bxe:Bxe_A1646 hypothetical protein; AIG2 family protein complement(2812063..2812464) Burkholderia phytofirmans PsJN 6284411 YP_001896112.1 CDS Bphyt_2492 NC_010681.1 2812559 2813053 R regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA complement(2812559..2813053) Burkholderia phytofirmans PsJN 6284412 YP_001896113.1 CDS Bphyt_2493 NC_010681.1 2813223 2814122 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bxe:Bxe_A1644 AraC family transcriptional regulator; AraC family transcriptional regulator 2813223..2814122 Burkholderia phytofirmans PsJN 6284413 YP_001896114.1 CDS Bphyt_2494 NC_010681.1 2814299 2814763 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A1643 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2814299..2814763) Burkholderia phytofirmans PsJN 6284414 YP_001896115.1 CDS gltX NC_010681.1 2815817 2817226 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(2815817..2817226) Burkholderia phytofirmans PsJN 6283562 YP_001896116.1 CDS Bphyt_2496 NC_010681.1 2817633 2818586 D PFAM: patatin; KEGG: bxe:Bxe_A1641 exported phospholipase; patatin 2817633..2818586 Burkholderia phytofirmans PsJN 6283563 YP_001896117.1 CDS Bphyt_2497 NC_010681.1 2818714 2819379 R PFAM: NLP/P60 protein; KEGG: bxe:Bxe_A1640 NLP/P60 family protein; NLP/P60 protein complement(2818714..2819379) Burkholderia phytofirmans PsJN 6283564 YP_001896118.1 CDS Bphyt_2498 NC_010681.1 2819517 2821151 R PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: bxe:Bxe_A1639 ABC peptide transporter ATPase; peptide ABC transporter ATPase complement(2819517..2821151) Burkholderia phytofirmans PsJN 6283565 YP_001896119.1 CDS Bphyt_2499 NC_010681.1 2821148 2822254 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A1638 ABC peptide transporter inner membrane subunit; peptide ABC transporter inner membrane protein complement(2821148..2822254) Burkholderia phytofirmans PsJN 6283566 YP_001896120.1 CDS Bphyt_2500 NC_010681.1 2822254 2823291 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A1637 ABC peptide transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2822254..2823291) Burkholderia phytofirmans PsJN 6283351 YP_001896121.1 CDS Bphyt_2501 NC_010681.1 2823341 2825182 R PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A1636 ABC peptide transporter periplasmic ligand binding protein; family 5 extracellular solute-binding protein complement(2823341..2825182) Burkholderia phytofirmans PsJN 6283352 YP_001896122.1 CDS Bphyt_2502 NC_010681.1 2825429 2826220 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 2825429..2826220 Burkholderia phytofirmans PsJN 6283353 YP_001896123.1 CDS Bphyt_2503 NC_010681.1 2826366 2826713 R KEGG: bxe:Bxe_A1634 hypothetical protein; hypothetical protein complement(2826366..2826713) Burkholderia phytofirmans PsJN 6283354 YP_001896124.1 CDS Bphyt_2505 NC_010681.1 2827492 2828403 D PFAM: amidohydrolase 2; KEGG: bbt:BBta_3275 hypothetical protein; amidohydrolase 2 2827492..2828403 Burkholderia phytofirmans PsJN 6283356 YP_001896125.1 CDS Bphyt_2506 NC_010681.1 2828826 2830076 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(2828826..2830076) Burkholderia phytofirmans PsJN 6283865 YP_001896126.1 CDS Bphyt_2507 NC_010681.1 2830462 2831907 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; protein of unkown function DUF1946 PP-loop ATpase; KEGG: bxe:Bxe_A1629 ATPase, PP-loop superfamily; tRNA(Ile)-lysidine synthetase complement(2830462..2831907) Burkholderia phytofirmans PsJN 6283866 YP_001896127.1 CDS Bphyt_2508 NC_010681.1 2831955 2832926 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(2831955..2832926) Burkholderia phytofirmans PsJN 6283867 YP_001896128.1 CDS Bphyt_2509 NC_010681.1 2833050 2834099 R PFAM: HhH-GPD family protein; KEGG: bxe:Bxe_A1627 HhH-GPD superfamily base excision DNA repair protein; HhH-GPD family protein complement(2833050..2834099) Burkholderia phytofirmans PsJN 6283868 YP_001896129.1 CDS cysS NC_010681.1 2834147 2835544 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(2834147..2835544) Burkholderia phytofirmans PsJN 6283869 YP_001896130.1 CDS Bphyt_2511 NC_010681.1 2835784 2836548 D PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: bxe:Bxe_A1625 hypothetical protein; hypothetical protein 2835784..2836548 Burkholderia phytofirmans PsJN 6282969 YP_001896131.1 CDS Bphyt_2512 NC_010681.1 2836597 2837178 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bxe:Bxe_A1624 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2836597..2837178 Burkholderia phytofirmans PsJN 6282970 YP_001896132.1 CDS Bphyt_2513 NC_010681.1 2837327 2837821 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bxe:Bxe_A1623 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2837327..2837821 Burkholderia phytofirmans PsJN 6282971 YP_001896133.1 CDS Bphyt_2514 NC_010681.1 2837870 2838667 D catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 2837870..2838667 Burkholderia phytofirmans PsJN 6282972 YP_001896134.1 CDS Bphyt_2515 NC_010681.1 2838815 2839651 R TIGRFAM: serine O-acetyltransferase; KEGG: bxe:Bxe_A1621 serine O-acetyltransferase; serine O-acetyltransferase complement(2838815..2839651) Burkholderia phytofirmans PsJN 6282973 YP_001896135.1 CDS Bphyt_2516 NC_010681.1 2839743 2839859 R hypothetical protein complement(2839743..2839859) Burkholderia phytofirmans PsJN 6282974 YP_001896136.1 CDS Bphyt_2517 NC_010681.1 2839860 2840921 R TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bxe:Bxe_A1620 RNA methyltransferase TrmH, group 1; RNA methyltransferase complement(2839860..2840921) Burkholderia phytofirmans PsJN 6282029 YP_001896137.1 CDS Bphyt_2518 NC_010681.1 2841092 2841895 D PFAM: inositol monophosphatase; KEGG: bxe:Bxe_A1619 inositol-1(or 4)-monophosphatase; inositol-phosphate phosphatase 2841092..2841895 Burkholderia phytofirmans PsJN 6282030 YP_001896138.1 CDS Bphyt_2519 NC_010681.1 2842097 2843395 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1618 hypothetical protein; lysophospholipid transporter LplT 2842097..2843395 Burkholderia phytofirmans PsJN 6282031 YP_001896139.1 CDS Bphyt_2520 NC_010681.1 2843553 2846237 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2843553..2846237 Burkholderia phytofirmans PsJN 6282032 YP_001896140.1 CDS Bphyt_2521 NC_010681.1 2846224 2847582 D KEGG: bxe:Bxe_A1616 hypothetical protein; hypothetical protein 2846224..2847582 Burkholderia phytofirmans PsJN 6282033 YP_001896141.1 CDS Bphyt_2522 NC_010681.1 2847562 2848104 R KEGG: bxe:Bxe_A1615 FKBP-type peptidyl-prolyl cis-transisomerase (rotamase); FKBP-type peptidyl-prolyl cis-transisomerase complement(2847562..2848104) Burkholderia phytofirmans PsJN 6282034 YP_001896142.1 CDS Bphyt_2523 NC_010681.1 2848281 2849387 D PFAM: cupin; SMART: transcription factor jumonji jmjC domain protein; KEGG: bxe:Bxe_A1614 hypothetical protein; cupin 2848281..2849387 Burkholderia phytofirmans PsJN 6282035 YP_001896143.1 CDS Bphyt_2524 NC_010681.1 2850040 2852307 R SMART: helicase c2; KEGG: bxe:Bxe_A1612 ATP-dependent helicase; helicase c2 complement(2850040..2852307) Burkholderia phytofirmans PsJN 6282861 YP_001896144.1 CDS Bphyt_2525 NC_010681.1 2852372 2852590 R PFAM: protein of unknown function DUF465; KEGG: bxe:Bxe_A1611 hypothetical protein; hypothetical protein complement(2852372..2852590) Burkholderia phytofirmans PsJN 6282862 YP_001896145.1 CDS Bphyt_2526 NC_010681.1 2852718 2853665 R KEGG: bxe:Bxe_A1610 hypothetical protein; hypothetical protein complement(2852718..2853665) Burkholderia phytofirmans PsJN 6282863 YP_001896146.1 CDS Bphyt_2527 NC_010681.1 2854005 2856353 D PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: bxe:Bxe_A1609 S1 RNA binding domain protein; RNA binding S1 domain-containing protein 2854005..2856353 Burkholderia phytofirmans PsJN 6282864 YP_001896147.1 CDS Bphyt_2528 NC_010681.1 2856541 2858427 R PFAM: K potassium transporter; KEGG: bxe:Bxe_A1608 K+ transporter KUP family; K potassium transporter complement(2856541..2858427) Burkholderia phytofirmans PsJN 6282865 YP_001896148.1 CDS Bphyt_2529 NC_010681.1 2858719 2859309 R PFAM: phosphoribosyltransferase; KEGG: bxe:Bxe_A1607 nucleotide phosphoribosyltransferase; phosphoribosyltransferase complement(2858719..2859309) Burkholderia phytofirmans PsJN 6282866 YP_001896149.1 CDS Bphyt_2530 NC_010681.1 2859313 2860659 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(2859313..2860659) Burkholderia phytofirmans PsJN 6282003 YP_001896150.1 CDS hisZ NC_010681.1 2860864 2862015 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(2860864..2862015) Burkholderia phytofirmans PsJN 6282004 YP_001896151.1 CDS Bphyt_2532 NC_010681.1 2862297 2862488 R KEGG: bxe:Bxe_A1603 hypothetical protein; hypothetical protein complement(2862297..2862488) Burkholderia phytofirmans PsJN 6282005 YP_001896152.1 CDS Bphyt_2533 NC_010681.1 2862533 2863435 R PFAM: band 7 protein; KEGG: bxe:Bxe_A1602 FtsH protease activity modulator HflC; hypothetical protein complement(2862533..2863435) Burkholderia phytofirmans PsJN 6282006 YP_001896153.1 CDS Bphyt_2534 NC_010681.1 2863448 2864848 R TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: bxe:Bxe_A1601 FtsH protease activity modulator HflK; HflK protein complement(2863448..2864848) Burkholderia phytofirmans PsJN 6282007 YP_001896154.1 CDS Bphyt_2535 NC_010681.1 2864898 2866112 R TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: bxe:Bxe_A1600 small GTP-binding protein; GTP-binding proten HflX complement(2864898..2866112) Burkholderia phytofirmans PsJN 6282008 YP_001896155.1 CDS hfq NC_010681.1 2866143 2866379 R Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq complement(2866143..2866379) Burkholderia phytofirmans PsJN 6282009 YP_001896156.1 CDS engA NC_010681.1 2866533 2867870 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(2866533..2867870) Burkholderia phytofirmans PsJN 6281457 YP_001896157.1 CDS Bphyt_2538 NC_010681.1 2868326 2869471 R TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: pyrrolo-quinoline quinone; KEGG: bxe:Bxe_A1597 transcription accessory protein, TEX; outer membrane assembly lipoprotein YfgL complement(2868326..2869471) Burkholderia phytofirmans PsJN 6281458 YP_001896158.1 CDS Bphyt_2539 NC_010681.1 2869558 2870187 R KEGG: bxe:Bxe_A1596 hypothetical protein; hypothetical protein complement(2869558..2870187) Burkholderia phytofirmans PsJN 6281459 YP_001896159.1 CDS hisS NC_010681.1 2870266 2871606 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(2870266..2871606) Burkholderia phytofirmans PsJN 6281460 YP_001896160.1 CDS ispG NC_010681.1 2871628 2872944 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2871628..2872944) Burkholderia phytofirmans PsJN 6281461 YP_001896161.1 CDS Bphyt_2542 NC_010681.1 2873031 2874119 R SMART: helix-turn-helix domain protein; KEGG: bxe:Bxe_A1593 XRE family transcriptional regulator; XRE family transcriptional regulator complement(2873031..2874119) Burkholderia phytofirmans PsJN 6281462 YP_001896162.1 CDS Bphyt_2543 NC_010681.1 2874337 2875488 R TIGRFAM:radical SAM protein; PFAM: radical SAM domain protein; KEGG: bxe:Bxe_A1592 conserved hypothetical protein 48; radical SAM enzyme, Cfr family complement(2874337..2875488) Burkholderia phytofirmans PsJN 6281233 YP_001896163.1 CDS ndk NC_010681.1 2875650 2876075 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(2875650..2876075) Burkholderia phytofirmans PsJN 6281234 YP_001896164.1 CDS Bphyt_2545 NC_010681.1 2876381 2877079 D PFAM: protein of unknown function UPF0005; KEGG: bxe:Bxe_A1590 hypothetical protein; hypothetical protein 2876381..2877079 Burkholderia phytofirmans PsJN 6281235 YP_001896165.1 CDS Bphyt_2546 NC_010681.1 2877210 2877983 R PFAM: beta-lactamase; KEGG: bxe:Bxe_A1587 metallo-beta-lactamase family protein; beta-lactamase complement(2877210..2877983) Burkholderia phytofirmans PsJN 6281236 YP_001896166.1 CDS Bphyt_2547 NC_010681.1 2877991 2879130 R KEGG: bxe:Bxe_A1586 lipoprotein; lipoprotein complement(2877991..2879130) Burkholderia phytofirmans PsJN 6281237 YP_001896167.1 CDS Bphyt_2548 NC_010681.1 2879263 2880189 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(2879263..2880189) Burkholderia phytofirmans PsJN 6281238 YP_001896168.1 CDS Bphyt_2549 NC_010681.1 2880233 2880835 R KEGG: bxe:Bxe_A1584 hypothetical protein; hypothetical protein complement(2880233..2880835) Burkholderia phytofirmans PsJN 6281239 YP_001896169.1 CDS Bphyt_2550 NC_010681.1 2880871 2882073 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(2880871..2882073) Burkholderia phytofirmans PsJN 6281864 YP_001896170.1 CDS Bphyt_2551 NC_010681.1 2882080 2882742 R PFAM: peptidase M50; KEGG: bxe:Bxe_A1582 peptidase M50; peptidase M50 complement(2882080..2882742) Burkholderia phytofirmans PsJN 6281865 YP_001896171.1 CDS Bphyt_2552 NC_010681.1 2882790 2883425 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: bxe:Bxe_A1581 SUA5/YciO/YrdC/YwlC family translation factor; Sua5/YciO/YrdC/YwlC family protein complement(2882790..2883425) Burkholderia phytofirmans PsJN 6281866 YP_001896172.1 CDS Bphyt_2553 NC_010681.1 2883556 2884386 R PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: bxe:Bxe_A1580 hypothetical protein; PHP domain-containing protein complement(2883556..2884386) Burkholderia phytofirmans PsJN 6281867 YP_001896173.1 CDS Bphyt_2554 NC_010681.1 2884506 2885390 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1579 hydrolase; alpha/beta fold family hydrolase complement(2884506..2885390) Burkholderia phytofirmans PsJN 6281868 YP_001896174.1 CDS Bphyt_2555 NC_010681.1 2885474 2886403 R PFAM: protein of unknown function DUF455; KEGG: bxe:Bxe_A1578 hypothetical protein; hypothetical protein complement(2885474..2886403) Burkholderia phytofirmans PsJN 6281869 YP_001896175.1 CDS Bphyt_2556 NC_010681.1 2887188 2887712 D PFAM: transferase hexapeptide repeat containing protein; KEGG: bxe:Bxe_A1577 transferase, hexapeptide repeat; transferase 2887188..2887712 Burkholderia phytofirmans PsJN 6283251 YP_001896176.1 CDS Bphyt_2557 NC_010681.1 2887777 2888727 D PFAM: Hsp33 protein; KEGG: bxe:Bxe_A1576 HSP33 chaperonin; Hsp33 protein 2887777..2888727 Burkholderia phytofirmans PsJN 6283252 YP_001896177.1 CDS Bphyt_2558 NC_010681.1 2888924 2889313 D KEGG: bxe:Bxe_A1575 lipoprotein; lipoprotein 2888924..2889313 Burkholderia phytofirmans PsJN 6283253 YP_001896178.1 CDS ftsB NC_010681.1 2889436 2889873 R forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB complement(2889436..2889873) Burkholderia phytofirmans PsJN 6283254 YP_001896179.1 CDS eno NC_010681.1 2889981 2891264 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(2889981..2891264) Burkholderia phytofirmans PsJN 6283255 YP_001896180.1 CDS Bphyt_2561 NC_010681.1 2891481 2892335 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2891481..2892335) Burkholderia phytofirmans PsJN 6283256 YP_001896181.1 CDS pyrG NC_010681.1 2892332 2894005 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2892332..2894005) Burkholderia phytofirmans PsJN 6283257 YP_001896182.1 CDS Bphyt_2563 NC_010681.1 2894250 2895053 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1570 hydrolase; alpha/beta fold family hydrolase complement(2894250..2895053) Burkholderia phytofirmans PsJN 6284390 YP_001896183.1 CDS Bphyt_2564 NC_010681.1 2895170 2897959 R TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase; ComEC/Rec2-related protein; KEGG: bxe:Bxe_A1569 ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 complement(2895170..2897959) Burkholderia phytofirmans PsJN 6284391 YP_001896184.1 CDS Bphyt_2565 NC_010681.1 2898071 2898859 R PFAM: TatD-related deoxyribonuclease; KEGG: bxe:Bxe_A1568 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease complement(2898071..2898859) Burkholderia phytofirmans PsJN 6284392 YP_001896185.1 CDS Bphyt_2566 NC_010681.1 2898907 2899650 R KEGG: bxe:Bxe_A1567 ABC lipoprotein efflux pump, ATPase subunit; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA; lipoprotein releasing system, ATP-binding protein complement(2898907..2899650) Burkholderia phytofirmans PsJN 6284393 YP_001896186.1 CDS Bphyt_2567 NC_010681.1 2899643 2900896 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: bxe:Bxe_A1566 ABC lipoprotein efflux pump, inner membrane subunit; lipoprotein releasing system transmembrane protein LolC/E family complement(2899643..2900896) Burkholderia phytofirmans PsJN 6284394 YP_001896187.1 CDS Bphyt_2568 NC_010681.1 2901208 2902374 D KEGG: bxe:Bxe_A1565 hypothetical protein; hypothetical protein 2901208..2902374 Burkholderia phytofirmans PsJN 6284395 YP_001896188.1 CDS Bphyt_2569 NC_010681.1 2902427 2904133 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: bxe:Bxe_A1564 RecJ exonuclease; single-stranded-DNA-specific exonuclease RecJ 2902427..2904133 Burkholderia phytofirmans PsJN 6282975 YP_001896189.1 CDS Bphyt_2570 NC_010681.1 2904245 2905498 D TIGRFAM: peptide chain release factor 2; PFAM: class I peptide chain release factor; PCRF domain protein; KEGG: bch:Bcen2424_2117 peptide chain release factor 2; peptide chain release factor 2 2904245..2905498 Burkholderia phytofirmans PsJN 6282976 YP_001896190.1 CDS lysS NC_010681.1 2905648 2907204 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2905648..2907204 Burkholderia phytofirmans PsJN 6282977 YP_001896191.1 CDS Bphyt_2572 NC_010681.1 2907518 2908261 D PFAM: 17 kDa surface antigen; KEGG: bxe:Bxe_A1560 hypothetical protein; 17 kDa surface antigen 2907518..2908261 Burkholderia phytofirmans PsJN 6282978 YP_001896192.1 CDS Bphyt_2573 NC_010681.1 2908384 2908581 R TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: bxe:Bxe_A1559 hypothetical protein; FeS assembly protein IscX complement(2908384..2908581) Burkholderia phytofirmans PsJN 6282979 YP_001896193.1 CDS Bphyt_2574 NC_010681.1 2908597 2908938 R TIGRFAM: ferredoxin 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: bxe:Bxe_A1558 ferredoxin 2Fe-2S type; 2Fe-2S type ferredoxin complement(2908597..2908938) Burkholderia phytofirmans PsJN 6282980 YP_001896194.1 CDS hscA NC_010681.1 2909093 2910964 R involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA complement(2909093..2910964) Burkholderia phytofirmans PsJN 6282981 YP_001896195.1 CDS hscB NC_010681.1 2911074 2911601 R J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB complement(2911074..2911601) Burkholderia phytofirmans PsJN 6281554 YP_001896196.1 CDS Bphyt_2577 NC_010681.1 2911766 2912089 R TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bxe:Bxe_A1555 iron-sulphur cluster assembly protein IscA; iron-sulfur cluster assembly protein IscA complement(2911766..2912089) Burkholderia phytofirmans PsJN 6281555 YP_001896197.1 CDS Bphyt_2578 NC_010681.1 2912249 2912665 R TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: bxe:Bxe_A1554 scaffold protein; scaffold protein complement(2912249..2912665) Burkholderia phytofirmans PsJN 6281556 YP_001896198.1 CDS Bphyt_2579 NC_010681.1 2912737 2913960 R catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase complement(2912737..2913960) Burkholderia phytofirmans PsJN 6281557 YP_001896199.1 CDS Bphyt_2580 NC_010681.1 2914036 2914566 R TIGRFAM: transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: bxe:Bxe_A1552 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator complement(2914036..2914566) Burkholderia phytofirmans PsJN 6281558 YP_001896200.1 CDS Bphyt_2581 NC_010681.1 2914700 2915197 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bxe:Bxe_A1551 protein tyrosine phosphatase; protein tyrosine phosphatase complement(2914700..2915197) Burkholderia phytofirmans PsJN 6281559 YP_001896201.1 CDS Bphyt_2582 NC_010681.1 2915346 2915585 R KEGG: bxe:Bxe_A1550 hypothetical protein; hypothetical protein complement(2915346..2915585) Burkholderia phytofirmans PsJN 6283421 YP_001896202.1 CDS Bphyt_2583 NC_010681.1 2915853 2916416 D KEGG: bxe:Bxe_A1549 hypothetical proline-rich protein; hypothetical protein 2915853..2916416 Burkholderia phytofirmans PsJN 6283422 YP_001896203.1 CDS Bphyt_2584 NC_010681.1 2916643 2918058 R PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_A1548 iron-sulfur binding protein; hypothetical protein complement(2916643..2918058) Burkholderia phytofirmans PsJN 6283423 YP_001896204.1 CDS Bphyt_2585 NC_010681.1 2918162 2918884 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_A1547 hypothetical protein; hypothetical protein complement(2918162..2918884) Burkholderia phytofirmans PsJN 6283424 YP_001896205.1 CDS Bphyt_2586 NC_010681.1 2919064 2919870 D PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: bxe:Bxe_A1546 IclR family transcriptional regulator; IclR family transcriptional regulator 2919064..2919870 Burkholderia phytofirmans PsJN 6283425 YP_001896206.1 CDS Bphyt_2587 NC_010681.1 2919975 2921162 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bxe:Bxe_A1545 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 complement(2919975..2921162) Burkholderia phytofirmans PsJN 6283426 YP_001896207.1 CDS Bphyt_2588 NC_010681.1 2921938 2922510 D TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bxe:Bxe_A1544 phasin; phasin family protein 2921938..2922510 Burkholderia phytofirmans PsJN 6283427 YP_001896208.1 CDS Bphyt_2589 NC_010681.1 2922827 2924629 R TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bxe:Bxe_A1543 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(2922827..2924629) Burkholderia phytofirmans PsJN 6282466 YP_001896209.1 CDS Bphyt_2590 NC_010681.1 2924895 2926547 R KEGG: bxe:Bxe_A1542 dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; dihydrolipoamide acetyltransferase complement(2924895..2926547) Burkholderia phytofirmans PsJN 6282467 YP_001896210.1 CDS aceE NC_010681.1 2926635 2929331 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(2926635..2929331) Burkholderia phytofirmans PsJN 6282468 YP_001896211.1 CDS Bphyt_2592 NC_010681.1 2929607 2932123 D KEGG: bxe:Bxe_A1540 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 2929607..2932123 Burkholderia phytofirmans PsJN 6282469 YP_001896212.1 CDS Bphyt_2593 NC_010681.1 2932120 2932764 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_A1539 two component LuxR family transcriptional regulator; LuxR family transcriptional regulator 2932120..2932764 Burkholderia phytofirmans PsJN 6282470 YP_001896213.1 CDS Bphyt_2594 NC_010681.1 2933379 2934320 D KEGG: bxe:Bxe_A1537 hypothetical protein; hypothetical protein 2933379..2934320 Burkholderia phytofirmans PsJN 6282471 YP_001896214.1 CDS Bphyt_2595 NC_010681.1 2934716 2935576 D PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: bxe:Bxe_A1536 methenyltetrahydrofolate cyclohydrolase; Methenyltetrahydrofolate cyclohydrolase 2934716..2935576 Burkholderia phytofirmans PsJN 6281463 YP_001896215.1 CDS Bphyt_2596 NC_010681.1 2935825 2936940 R PFAM: acyltransferase 3; KEGG: bxe:Bxe_A1535 O-antigen acetylase; acyltransferase 3 complement(2935825..2936940) Burkholderia phytofirmans PsJN 6281464 YP_001896216.1 CDS Bphyt_2597 NC_010681.1 2937266 2939374 D PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: bxe:Bxe_A1534 oligopeptidase A; oligopeptidase A 2937266..2939374 Burkholderia phytofirmans PsJN 6281465 YP_001896217.1 CDS Bphyt_2598 NC_010681.1 2939485 2940777 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(2939485..2940777) Burkholderia phytofirmans PsJN 6281466 YP_001896218.1 CDS Bphyt_2599 NC_010681.1 2940983 2941681 D TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: bxe:Bxe_A1530 aspartate racemase; aspartate racemase 2940983..2941681 Burkholderia phytofirmans PsJN 6281467 YP_001896219.1 CDS Bphyt_2600 NC_010681.1 2941857 2942264 R KEGG: ses:SARI_00371 hypothetical protein; hypothetical protein complement(2941857..2942264) Burkholderia phytofirmans PsJN 6281468 YP_001896220.1 CDS Bphyt_2601 NC_010681.1 2942288 2942674 R hypothetical protein complement(2942288..2942674) Burkholderia phytofirmans PsJN 6281469 YP_001896221.1 CDS Bphyt_2602 NC_010681.1 2942756 2943514 R KEGG: bur:Bcep18194_B0290 hypothetical protein; hypothetical protein complement(2942756..2943514) Burkholderia phytofirmans PsJN 6283899 YP_001896222.1 CDS Bphyt_2603 NC_010681.1 2943524 2944225 R KEGG: bur:Bcep18194_B0291 hypothetical protein; hypothetical protein complement(2943524..2944225) Burkholderia phytofirmans PsJN 6283900 YP_001896223.1 CDS Bphyt_2604 NC_010681.1 2944218 2944598 R KEGG: bvi:Bcep1808_2388 hypothetical protein; hypothetical protein complement(2944218..2944598) Burkholderia phytofirmans PsJN 6283901 YP_001896224.1 CDS Bphyt_2605 NC_010681.1 2944677 2945498 R PFAM: integrase; KEGG: bvi:Bcep1808_7043 integrase, catalytic region; integrase complement(2944677..2945498) Burkholderia phytofirmans PsJN 6283902 YP_001896225.1 CDS Bphyt_2606 NC_010681.1 2945511 2945912 R PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_2557 transposase IS3/IS911; transposase IS3/IS911 family protein complement(2945511..2945912) Burkholderia phytofirmans PsJN 6283903 YP_001896226.1 CDS Bphyt_2607 NC_010681.1 2946081 2946617 R KEGG: bmu:Bmul_3384 hypothetical protein; hypothetical protein complement(2946081..2946617) Burkholderia phytofirmans PsJN 6283904 YP_001896227.1 CDS Bphyt_2608 NC_010681.1 2946634 2947302 R KEGG: bcm:Bcenmc03_2634 hypothetical protein; hypothetical protein complement(2946634..2947302) Burkholderia phytofirmans PsJN 6281643 YP_001896228.1 CDS Bphyt_2609 NC_010681.1 2947675 2948058 D KEGG: ecx:EcHS_A2092 phage portal protein, lambda family; phage portal protein, lambda family 2947675..2948058 Burkholderia phytofirmans PsJN 6281644 YP_001896229.1 CDS Bphyt_2610 NC_010681.1 2948847 2949134 R KEGG: bxe:Bxe_A1527 hypothetical protein; hypothetical protein complement(2948847..2949134) Burkholderia phytofirmans PsJN 6281646 YP_001896230.1 CDS Bphyt_2611 NC_010681.1 2949305 2950081 D TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase; KEGG: bxe:Bxe_A1526 exodeoxyribonucleaseIII xth; exodeoxyribonuclease III Xth 2949305..2950081 Burkholderia phytofirmans PsJN 6281647 YP_001896231.1 CDS Bphyt_2612 NC_010681.1 2950103 2952202 R PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: bxe:Bxe_A1525 prolyl oligopeptidase family protein; prolyl oligopeptidase complement(2950103..2952202) Burkholderia phytofirmans PsJN 6281648 YP_001896232.1 CDS Bphyt_2613 NC_010681.1 2952317 2953834 R KEGG: bxe:Bxe_A1524 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; Fis family transcriptional regulator complement(2952317..2953834) Burkholderia phytofirmans PsJN 6282479 YP_001896233.1 CDS Bphyt_2614 NC_010681.1 2953879 2955021 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A1523 nitrogen regulation, histidine kinase, protein NR(II); signal transduction histidine kinase, nitrogen specific, NtrB complement(2953879..2955021) Burkholderia phytofirmans PsJN 6282480 YP_001896234.1 CDS Bphyt_2615 NC_010681.1 2955232 2956647 R TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bxe:Bxe_A1522 glutamine synthetase type I; glutamine synthetase complement(2955232..2956647) Burkholderia phytofirmans PsJN 6282481 YP_001896235.1 CDS Bphyt_2616 NC_010681.1 2957089 2957553 D SMART: rhodanese; KEGG: bxe:Bxe_A1520 hypothetical protein; rhodanese 2957089..2957553 Burkholderia phytofirmans PsJN 6282482 YP_001896236.1 CDS Bphyt_2617 NC_010681.1 2957850 2958686 R PFAM: molybdopterin binding domain; KEGG: bxe:Bxe_A1519 hypothetical protein; molybdopterin binding domain-containing protein complement(2957850..2958686) Burkholderia phytofirmans PsJN 6282483 YP_001896237.1 CDS Bphyt_2618 NC_010681.1 2958719 2959552 R KEGG: bxe:Bxe_A1518 hypothetical protein; hypothetical protein complement(2958719..2959552) Burkholderia phytofirmans PsJN 6282484 YP_001896238.1 CDS Bphyt_2619 NC_010681.1 2959700 2960698 R PFAM: fatty acid hydroxylase; KEGG: bxe:Bxe_A1517 hypothetical protein; fatty acid hydroxylase complement(2959700..2960698) Burkholderia phytofirmans PsJN 6281187 YP_001896239.1 CDS Bphyt_2620 NC_010681.1 2960757 2961776 R KEGG: bxe:Bxe_A1516 hypothetical protein; hypothetical protein complement(2960757..2961776) Burkholderia phytofirmans PsJN 6281188 YP_001896240.1 CDS Bphyt_2621 NC_010681.1 2962368 2965001 D PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bxe:Bxe_A1514 outer membrane protein, autotransporter and adhesin; YadA domain-containing protein 2962368..2965001 Burkholderia phytofirmans PsJN 6281189 YP_001896241.1 CDS Bphyt_2622 NC_010681.1 2965238 2969200 R KEGG: bxe:Bxe_A1513 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase; helicase-associated domain protein; protein of unknown function DUF1605; SMART: ATPase AAA; DEAD-like helicases; ATP-dependent helicase HrpA complement(2965238..2969200) Burkholderia phytofirmans PsJN 6281190 YP_001896242.1 CDS Bphyt_2623 NC_010681.1 2969554 2970942 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2969554..2970942 Burkholderia phytofirmans PsJN 6281191 YP_001896243.1 CDS Bphyt_2624 NC_010681.1 2970997 2971272 D PFAM: Fe(II) trafficking protein YggX; KEGG: bxe:Bxe_A1511 hypothetical protein; hypothetical protein 2970997..2971272 Burkholderia phytofirmans PsJN 6281192 YP_001896244.1 CDS Bphyt_2625 NC_010681.1 2971972 2973483 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1509 proline/betaine major facilitator superfamily (MFS) transporter; general substrate transporter 2971972..2973483 Burkholderia phytofirmans PsJN 6281193 YP_001896245.1 CDS Bphyt_2626 NC_010681.1 2973563 2974051 R TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: bxe:Bxe_A1508 protein of unknown function UPF0025; phosphodiesterase complement(2973563..2974051) Burkholderia phytofirmans PsJN 6280933 YP_001896246.1 CDS Bphyt_2627 NC_010681.1 2974152 2974961 R KEGG: bmn:BMA10247_3066 hypothetical protein; hypothetical protein complement(2974152..2974961) Burkholderia phytofirmans PsJN 6280934 YP_001896247.1 CDS Bphyt_2628 NC_010681.1 2974964 2975539 R PFAM: protein of unknown function DUF1211; KEGG: bxe:Bxe_A1498 hypothetical protein; hypothetical protein complement(2974964..2975539) Burkholderia phytofirmans PsJN 6280935 YP_001896248.1 CDS Bphyt_2629 NC_010681.1 2975676 2976026 R PFAM: cupin; KEGG: bxe:Bxe_A1497 hypothetical protein; cupin complement(2975676..2976026) Burkholderia phytofirmans PsJN 6280936 YP_001896249.1 CDS Bphyt_2630 NC_010681.1 2976054 2977454 R Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase complement(2976054..2977454) Burkholderia phytofirmans PsJN 6280937 YP_001896250.1 CDS Bphyt_2631 NC_010681.1 2977591 2977779 R KEGG: bxe:Bxe_A1495 hypothetical protein; hypothetical protein complement(2977591..2977779) Burkholderia phytofirmans PsJN 6280938 YP_001896251.1 CDS Bphyt_2632 NC_010681.1 2978002 2980308 R KEGG: bxe:Bxe_A1494 diguanylate cyclase/phosphodiesterase(GGDEF & EAL domains) with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(2978002..2980308) Burkholderia phytofirmans PsJN 6284363 YP_001896252.1 CDS Bphyt_2633 NC_010681.1 2980698 2981648 R PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: bxe:Bxe_A1493 hypothetical proline rich protein; SH3 type 3 domain-containing protein complement(2980698..2981648) Burkholderia phytofirmans PsJN 6284364 YP_001896253.1 CDS Bphyt_2634 NC_010681.1 2981951 2982529 D KEGG: bxe:Bxe_A1492 hypothetical protein; hypothetical protein 2981951..2982529 Burkholderia phytofirmans PsJN 6284365 YP_001896254.1 CDS Bphyt_2635 NC_010681.1 2982635 2983177 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bxe:Bxe_A1491 cytidine/deoxycytidylate deaminase family protein; zinc-binding CMP/dCMP deaminase complement(2982635..2983177) Burkholderia phytofirmans PsJN 6284366 YP_001896255.1 CDS Bphyt_2636 NC_010681.1 2983221 2984351 R PFAM: basic membrane lipoprotein; KEGG: bxe:Bxe_A1490 ABC transporter periplasmic ligand binding protein; basic membrane lipoprotein complement(2983221..2984351) Burkholderia phytofirmans PsJN 6284367 YP_001896256.1 CDS Bphyt_2637 NC_010681.1 2984619 2985368 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A1489 short chain dehydrogenase; short chain dehydrogenase 2984619..2985368 Burkholderia phytofirmans PsJN 6284368 YP_001896257.1 CDS Bphyt_2638 NC_010681.1 2985398 2985724 R KEGG: bxe:Bxe_A1488 hypothetical protein; hypothetical protein complement(2985398..2985724) Burkholderia phytofirmans PsJN 6284369 YP_001896258.1 CDS Bphyt_2639 NC_010681.1 2985745 2987178 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_A1487 GntR family transcriptional regulator with aminotransferase acivity; GntR family transcriptional regulator complement(2985745..2987178) Burkholderia phytofirmans PsJN 6283289 YP_001896259.1 CDS Bphyt_2640 NC_010681.1 2987348 2989663 D TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bxe:Bxe_A1486 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase molybdopterin subunit 2987348..2989663 Burkholderia phytofirmans PsJN 6283290 YP_001896260.1 CDS Bphyt_2641 NC_010681.1 2989667 2990170 R PFAM: protein of unknown function DUF45; KEGG: bxe:Bxe_A1485 hypothetical protein; hypothetical protein complement(2989667..2990170) Burkholderia phytofirmans PsJN 6283291 YP_001896261.1 CDS Bphyt_2642 NC_010681.1 2990190 2990822 R KEGG: bxe:Bxe_A1484 hypothetical protein; hypothetical protein complement(2990190..2990822) Burkholderia phytofirmans PsJN 6283292 YP_001896262.1 CDS Bphyt_2643 NC_010681.1 2991015 2991323 R KEGG: bcm:Bcenmc03_1557 hypothetical protein; hypothetical protein complement(2991015..2991323) Burkholderia phytofirmans PsJN 6283293 YP_001896263.1 CDS Bphyt_2644 NC_010681.1 2991362 2991580 D KEGG: smd:Smed_1928 protein of unknown function DUF1643; hypothetical protein 2991362..2991580 Burkholderia phytofirmans PsJN 6283294 YP_001896264.1 CDS Bphyt_2645 NC_010681.1 2991741 2993360 R KEGG: bte:BTH_II0937 hypothetical protein; hypothetical protein complement(2991741..2993360) Burkholderia phytofirmans PsJN 6281945 YP_001896265.1 CDS Bphyt_2646 NC_010681.1 2993385 2993924 R KEGG: bte:BTH_II1530 hypothetical protein; hypothetical protein complement(2993385..2993924) Burkholderia phytofirmans PsJN 6281946 YP_001896266.1 CDS Bphyt_2647 NC_010681.1 2994558 2995628 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A1469 transcriptional regulator, LacI family; LacI family transcriptional regulator 2994558..2995628 Burkholderia phytofirmans PsJN 6281948 YP_001896267.1 CDS Bphyt_2648 NC_010681.1 2995782 2996870 D PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A1468 ABC polyamine transporter periplasmic ligand binding protein; family 1 extracellular solute-binding protein 2995782..2996870 Burkholderia phytofirmans PsJN 6281949 YP_001896268.1 CDS Bphyt_2649 NC_010681.1 2996867 2997691 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A1467 ABC polyamine transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2996867..2997691 Burkholderia phytofirmans PsJN 6281950 YP_001896269.1 CDS Bphyt_2650 NC_010681.1 2997739 2998641 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A1466 ABC polyamine transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2997739..2998641 Burkholderia phytofirmans PsJN 6284490 YP_001896270.1 CDS Bphyt_2651 NC_010681.1 2998638 2999684 D PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: bxe:Bxe_A1465 ABC polyamine transporter ATPase; ABC transporter 2998638..2999684 Burkholderia phytofirmans PsJN 6284491 YP_001896271.1 CDS Bphyt_2652 NC_010681.1 2999730 3000557 D PFAM: metallophosphoesterase; KEGG: bxe:Bxe_A1464 cAMP phosphodiesterase; metallophosphoesterase 2999730..3000557 Burkholderia phytofirmans PsJN 6284492 YP_001896272.1 CDS Bphyt_2653 NC_010681.1 3000568 3001053 R KEGG: bxe:Bxe_A1463 hypothetical protein; hypothetical protein complement(3000568..3001053) Burkholderia phytofirmans PsJN 6284493 YP_001896273.1 CDS Bphyt_2654 NC_010681.1 3001263 3002462 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1462 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein 3001263..3002462 Burkholderia phytofirmans PsJN 6284494 YP_001896274.1 CDS Bphyt_2655 NC_010681.1 3002491 3002919 R PFAM: response regulator receiver; KEGG: bxe:Bxe_A1461 response regulator receiver domain protein(CheY); response regulator receiver protein complement(3002491..3002919) Burkholderia phytofirmans PsJN 6284495 YP_001896275.1 CDS Bphyt_2656 NC_010681.1 3002940 3003572 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_A1460 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(3002940..3003572) Burkholderia phytofirmans PsJN 6282785 YP_001896276.1 CDS Bphyt_2657 NC_010681.1 3003864 3004436 R PFAM: rubrerythrin; ferritin; KEGG: bxe:Bxe_A1459 bacterioferritin; ferritin complement(3003864..3004436) Burkholderia phytofirmans PsJN 6282786 YP_001896277.1 CDS Bphyt_2658 NC_010681.1 3004537 3004698 R PFAM: protein of unknown function DUF1328; KEGG: bxe:Bxe_A1458 hypothetical protein; hypothetical protein complement(3004537..3004698) Burkholderia phytofirmans PsJN 6282787 YP_001896278.1 CDS Bphyt_2659 NC_010681.1 3004806 3004982 R PFAM: protein of unknown function DUF1328; KEGG: bxe:Bxe_A1457 hypothetical protein; hypothetical protein complement(3004806..3004982) Burkholderia phytofirmans PsJN 6282788 YP_001896279.1 CDS Bphyt_2660 NC_010681.1 3005226 3006710 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bxe:Bxe_A1456 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3005226..3006710 Burkholderia phytofirmans PsJN 6282789 YP_001896280.1 CDS Bphyt_2661 NC_010681.1 3006944 3007078 D PFAM: entericidin EcnAB; KEGG: bxe:Bxe_A1455 hypothetical protein; entericidin EcnAB 3006944..3007078 Burkholderia phytofirmans PsJN 6282790 YP_001896281.1 CDS Bphyt_2662 NC_010681.1 3007335 3008129 R KEGG: bxe:Bxe_A1453 lipoprotein; lipoprotein complement(3007335..3008129) Burkholderia phytofirmans PsJN 6282791 YP_001896282.1 CDS Bphyt_2663 NC_010681.1 3008412 3010517 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bxe:Bxe_A1452 2,4-dienoyl-CoA reductase FadH2; NADH:flavin oxidoreductase 3008412..3010517 Burkholderia phytofirmans PsJN 6283833 YP_001896283.1 CDS Bphyt_2664 NC_010681.1 3010573 3011502 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A1451 10 TMS drug/metabolite exporter, DME family, DMT super family; hypothetical protein complement(3010573..3011502) Burkholderia phytofirmans PsJN 6283834 YP_001896284.1 CDS Bphyt_2665 NC_010681.1 3011867 3012112 R TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: bxe:Bxe_A2179 hypothetical protein; pentapeptide MXKDX repeat-containing protein complement(3011867..3012112) Burkholderia phytofirmans PsJN 6283835 YP_001896285.1 CDS Bphyt_2666 NC_010681.1 3012230 3013021 R PFAM: oxidoreductase molybdopterin binding; KEGG: bxe:Bxe_A2177 oxidoreductase, molybdopterin binding; molybdopterin binding oxidoreductase complement(3012230..3013021) Burkholderia phytofirmans PsJN 6283836 YP_001896286.1 CDS Bphyt_2667 NC_010681.1 3013062 3013703 R KEGG: bxe:Bxe_A2178 transmembrane hydrogenase cytochrome b-type subunit; transmembrane hydrogenase cytochrome b-type subunit complement(3013062..3013703) Burkholderia phytofirmans PsJN 6283837 YP_001896287.1 CDS Bphyt_2668 NC_010681.1 3013734 3014579 R PFAM: protein of unknown function DUF1223; KEGG: bpm:BURPS1710b_1531 hypothetical protein; hypothetical protein complement(3013734..3014579) Burkholderia phytofirmans PsJN 6283838 YP_001896288.1 CDS Bphyt_2669 NC_010681.1 3015020 3015430 D PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bxe:Bxe_A1450 GreA/GreB family elongation factor; GreA/GreB family elongation factor 3015020..3015430 Burkholderia phytofirmans PsJN 6281264 YP_001896289.1 CDS Bphyt_2670 NC_010681.1 3015795 3017726 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 3015795..3017726 Burkholderia phytofirmans PsJN 6281265 YP_001896290.1 CDS Bphyt_2671 NC_010681.1 3017983 3018195 D KEGG: bxe:Bxe_A1448 osmotically inducible lipoprotein B precursor; osmotically inducible lipoprotein B 3017983..3018195 Burkholderia phytofirmans PsJN 6281266 YP_001896291.1 CDS Bphyt_2672 NC_010681.1 3018351 3018842 D KEGG: bxe:Bxe_A1447 hypothetical protein; hypothetical protein 3018351..3018842 Burkholderia phytofirmans PsJN 6281267 YP_001896292.1 CDS Bphyt_2673 NC_010681.1 3019181 3020779 D TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: bxe:Bxe_A1446 L-lactate/H+ symporter; L-lactate transport 3019181..3020779 Burkholderia phytofirmans PsJN 6281268 YP_001896293.1 CDS Bphyt_2674 NC_010681.1 3021214 3022140 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A1445 10 TMS drug/metabolite exporter, DME family, DMT super family; hypothetical protein 3021214..3022140 Burkholderia phytofirmans PsJN 6281269 YP_001896294.1 CDS Bphyt_2675 NC_010681.1 3022649 3022804 R hypothetical protein complement(3022649..3022804) Burkholderia phytofirmans PsJN 6281396 YP_001896295.1 CDS Bphyt_2676 NC_010681.1 3022986 3024215 R KEGG: bxe:Bxe_A1444 exported lipoprotein; exported lipoprotein complement(3022986..3024215) Burkholderia phytofirmans PsJN 6281397 YP_001896296.1 CDS Bphyt_2677 NC_010681.1 3024676 3025140 D KEGG: bxe:Bxe_A1442 hypothetical protein; hypothetical protein 3024676..3025140 Burkholderia phytofirmans PsJN 6281398 YP_001896297.1 CDS Bphyt_2678 NC_010681.1 3025211 3026494 D KEGG: bxe:Bxe_A1441 hypothetical protein; hypothetical protein 3025211..3026494 Burkholderia phytofirmans PsJN 6281399 YP_001896298.1 CDS Bphyt_2679 NC_010681.1 3026634 3028508 D KEGG: bxe:Bxe_A1440 accessory processing protein; accessory processing protein 3026634..3028508 Burkholderia phytofirmans PsJN 6281400 YP_001896299.1 CDS Bphyt_2680 NC_010681.1 3028619 3029107 R KEGG: bxe:Bxe_A1439 hypothetical protein; hypothetical protein complement(3028619..3029107) Burkholderia phytofirmans PsJN 6281401 YP_001896300.1 CDS Bphyt_2681 NC_010681.1 3029423 3029752 R KEGG: bxe:Bxe_A1437 hypothetical protein; hypothetical protein complement(3029423..3029752) Burkholderia phytofirmans PsJN 6281402 YP_001896301.1 CDS Bphyt_2682 NC_010681.1 3030019 3030915 D KEGG: bxe:Bxe_A1436 hypothetical protein; hypothetical protein 3030019..3030915 Burkholderia phytofirmans PsJN 6283515 YP_001896302.1 CDS Bphyt_2683 NC_010681.1 3031194 3032912 D KEGG: bxe:Bxe_A1435 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase 3031194..3032912 Burkholderia phytofirmans PsJN 6283516 YP_001896303.1 CDS Bphyt_2684 NC_010681.1 3033033 3033800 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A1434 ABC polar amino acid transporter ATPase; ABC transporter complement(3033033..3033800) Burkholderia phytofirmans PsJN 6283517 YP_001896304.1 CDS Bphyt_2685 NC_010681.1 3033800 3034477 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A1433 ABC polar amino acid transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(3033800..3034477) Burkholderia phytofirmans PsJN 6283518 YP_001896305.1 CDS Bphyt_2686 NC_010681.1 3034500 3035282 R PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A1432 ABC polar amino acid transporter periplasmic ligand binding protein; family 3 extracellular solute-binding protein complement(3034500..3035282) Burkholderia phytofirmans PsJN 6283519 YP_001896306.1 CDS Bphyt_2687 NC_010681.1 3035638 3037089 R catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase complement(3035638..3037089) Burkholderia phytofirmans PsJN 6283520 YP_001896307.1 CDS Bphyt_2688 NC_010681.1 3037156 3038667 R TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bxe:Bxe_A1430 nucleobase/cation symporter, NCS1 family; NCS1 nucleoside transporter family complement(3037156..3038667) Burkholderia phytofirmans PsJN 6283689 YP_001896308.1 CDS Bphyt_2689 NC_010681.1 3038812 3040146 R catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase complement(3038812..3040146) Burkholderia phytofirmans PsJN 6283690 YP_001896309.1 CDS Bphyt_2690 NC_010681.1 3040215 3041564 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase complement(3040215..3041564) Burkholderia phytofirmans PsJN 6283691 YP_001896310.1 CDS Bphyt_2691 NC_010681.1 3041700 3042980 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(3041700..3042980) Burkholderia phytofirmans PsJN 6283692 YP_001896311.1 CDS Bphyt_2692 NC_010681.1 3043283 3044032 D PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: bxe:Bxe_A1426 TetR family transcriptional regulator; TetR family transcriptional regulator 3043283..3044032 Burkholderia phytofirmans PsJN 6283693 YP_001896312.1 CDS Bphyt_2693 NC_010681.1 3044046 3044240 D KEGG: bmu:Bmul_3792 hypothetical protein; hypothetical protein 3044046..3044240 Burkholderia phytofirmans PsJN 6283694 YP_001896313.1 CDS Bphyt_2694 NC_010681.1 3044297 3045538 R TIGRFAM: benzoyl-CoA oxygenase/reductase, BoxA protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bxe:Bxe_A1424 benzoyl-CoA oxygenase component A (BoxA); benzoyl-CoA oxygenase/reductase, BoxA protein complement(3044297..3045538) Burkholderia phytofirmans PsJN 6283695 YP_001896314.1 CDS Bphyt_2695 NC_010681.1 3045599 3047026 R TIGRFAM: benzoyl-CoA oxygenase subunit beta; KEGG: bxe:Bxe_A1423 benzoyl-CoA oxygenase component B (BoxB); benzoyl-CoA oxygenase subunit beta complement(3045599..3047026) Burkholderia phytofirmans PsJN 6282147 YP_001896315.1 CDS Bphyt_2696 NC_010681.1 3047151 3048821 R cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA; benzoyl-CoA-dihydrodiol lyase complement(3047151..3048821) Burkholderia phytofirmans PsJN 6282148 YP_001896316.1 CDS Bphyt_2697 NC_010681.1 3048939 3050063 R consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate; anaerobic benzoate catabolism transcriptional regulator complement(3048939..3050063) Burkholderia phytofirmans PsJN 6282149 YP_001896317.1 CDS Bphyt_2698 NC_010681.1 3050106 3050573 D KEGG: bxe:Bxe_A4554 unknown protein (box pathway); hypothetical protein 3050106..3050573 Burkholderia phytofirmans PsJN 6282150 YP_001896318.1 CDS Bphyt_2699 NC_010681.1 3050582 3052177 D TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: aldehyde dehydrogenase_; KEGG: bxe:Bxe_A1420 aldehyde dehydrogenase; aldehyde dehydrogenase 3050582..3052177 Burkholderia phytofirmans PsJN 6282151 YP_001896319.1 CDS Bphyt_2700 NC_010681.1 3052287 3053879 D TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A1419 benzoate-coenzyme A ligase; benzoate-CoA ligase family 3052287..3053879 Burkholderia phytofirmans PsJN 6282152 YP_001896320.1 CDS Bphyt_2701 NC_010681.1 3053888 3054742 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1418 lactonase (box pathway); alpha/beta fold family hydrolase 3053888..3054742 Burkholderia phytofirmans PsJN 6284151 YP_001896321.1 CDS Bphyt_2702 NC_010681.1 3054805 3056175 R TIGRFAM: gluconate transporter; PFAM: gluconate transporter; citrate transporter; KEGG: reu:Reut_B4018 gluconate transporter; gluconate transporter complement(3054805..3056175) Burkholderia phytofirmans PsJN 6284152 YP_001896322.1 CDS Bphyt_2703 NC_010681.1 3056285 3057403 R PFAM: porin Gram-negative type; KEGG: bur:Bcep18194_B0285 outer membrane protein (porin); porin complement(3056285..3057403) Burkholderia phytofirmans PsJN 6284153 YP_001896323.1 CDS Bphyt_2704 NC_010681.1 3057548 3058756 R TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; L-seryl-tRNA selenium transferase; KEGG: atc:AGR_L_3109 selenocysteine synthase; pyridoxal phosphate-dependent enzyme complement(3057548..3058756) Burkholderia phytofirmans PsJN 6284154 YP_001896324.1 CDS Bphyt_2705 NC_010681.1 3058873 3059745 D PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: ret:RHE_PE00298 transcriptional regulator protein, IclR family; IclR family transcriptional regulator 3058873..3059745 Burkholderia phytofirmans PsJN 6284155 YP_001896325.1 CDS Bphyt_2706 NC_010681.1 3059799 3060260 D PFAM: endoribonuclease L-PSP; KEGG: atc:AGR_L_3105 hypothetical protein; endoribonuclease L-PSP 3059799..3060260 Burkholderia phytofirmans PsJN 6284156 YP_001896326.1 CDS Bphyt_2707 NC_010681.1 3060398 3060724 D KEGG: bxe:Bxe_A1416 hypothetical protein; hypothetical protein 3060398..3060724 Burkholderia phytofirmans PsJN 6284157 YP_001896327.1 CDS Bphyt_2708 NC_010681.1 3060806 3062917 D KEGG: bxe:Bxe_A1415 non-hemolytic phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phosphocholine-specific phospholipase C 3060806..3062917 Burkholderia phytofirmans PsJN 6283780 YP_001896328.1 CDS Bphyt_2709 NC_010681.1 3063017 3064306 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_A1414 hypothetical protein; FAD dependent oxidoreductase complement(3063017..3064306) Burkholderia phytofirmans PsJN 6283781 YP_001896329.1 CDS Bphyt_2710 NC_010681.1 3064333 3064617 R KEGG: bxe:Bxe_A1413 hypothetical protein; hypothetical protein complement(3064333..3064617) Burkholderia phytofirmans PsJN 6283782 YP_001896330.1 CDS Bphyt_2712 NC_010681.1 3064742 3065725 R PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: bxe:Bxe_A1411 thiamine-monophosphate kinase; AIR synthase-like protein domain-containing protein complement(3064742..3065725) Burkholderia phytofirmans PsJN 6283784 YP_001896331.1 CDS Bphyt_2713 NC_010681.1 3065722 3066333 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A1410 hypothetical protein; N-acetyltransferase GCN5 complement(3065722..3066333) Burkholderia phytofirmans PsJN 6283785 YP_001896332.1 CDS Bphyt_2714 NC_010681.1 3066336 3067406 R PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bxe:Bxe_A1409 hypothetical protein; radical SAM protein complement(3066336..3067406) Burkholderia phytofirmans PsJN 6283786 YP_001896333.1 CDS Bphyt_2715 NC_010681.1 3067399 3068433 R PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bxe:Bxe_A1408 nitrilase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3067399..3068433) Burkholderia phytofirmans PsJN 6281693 YP_001896334.1 CDS Bphyt_2716 NC_010681.1 3068464 3068946 R KEGG: bxe:Bxe_A1407 hypothetical protein; hypothetical protein complement(3068464..3068946) Burkholderia phytofirmans PsJN 6281694 YP_001896335.1 CDS Bphyt_2717 NC_010681.1 3069307 3070698 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_A1406 GntR family transcriptional regulator; GntR family transcriptional regulator 3069307..3070698 Burkholderia phytofirmans PsJN 6281695 YP_001896336.1 CDS Bphyt_2718 NC_010681.1 3070996 3072795 D PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A1405 methyl-accepting chemotaxis sensory transducer, cache sensor; methyl-accepting chemotaxis sensory transducer with Cache sensor 3070996..3072795 Burkholderia phytofirmans PsJN 6281696 YP_001896337.1 CDS Bphyt_2719 NC_010681.1 3072818 3074398 D PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A1404 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3072818..3074398 Burkholderia phytofirmans PsJN 6281697 YP_001896338.1 CDS Bphyt_2720 NC_010681.1 3074444 3074824 R KEGG: bxe:Bxe_A1403 hypothetical protein; hypothetical protein complement(3074444..3074824) Burkholderia phytofirmans PsJN 6281698 YP_001896339.1 CDS Bphyt_2721 NC_010681.1 3074919 3075269 R KEGG: bxe:Bxe_A1402 hypothetical protein; hypothetical protein complement(3074919..3075269) Burkholderia phytofirmans PsJN 6281107 YP_001896340.1 CDS Bphyt_2722 NC_010681.1 3075425 3077011 R PFAM: glucose-methanol-choline oxidoreductase; KEGG: bxe:Bxe_A1401 2-keto-gluconate dehydrogenase; glucose-methanol-choline oxidoreductase complement(3075425..3077011) Burkholderia phytofirmans PsJN 6281108 YP_001896341.1 CDS Bphyt_2723 NC_010681.1 3077182 3077853 R KEGG: bxe:Bxe_A1400 hypothetical protein; hypothetical protein complement(3077182..3077853) Burkholderia phytofirmans PsJN 6281109 YP_001896342.1 CDS Bphyt_2724 NC_010681.1 3077966 3078364 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A1399 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3077966..3078364) Burkholderia phytofirmans PsJN 6281110 YP_001896343.1 CDS Bphyt_2725 NC_010681.1 3078725 3079135 D KEGG: bxe:Bxe_A1397 hypothetical protein; hypothetical protein 3078725..3079135 Burkholderia phytofirmans PsJN 6281111 YP_001896344.1 CDS Bphyt_2726 NC_010681.1 3079166 3079690 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_A1396 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(3079166..3079690) Burkholderia phytofirmans PsJN 6281112 YP_001896345.1 CDS Bphyt_2727 NC_010681.1 3079687 3081348 R PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A1395 acetyl-CoA synthetase; AMP-dependent synthetase and ligase complement(3079687..3081348) Burkholderia phytofirmans PsJN 6281113 YP_001896346.1 CDS Bphyt_2728 NC_010681.1 3081345 3082265 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A1394 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3081345..3082265) Burkholderia phytofirmans PsJN 6284253 YP_001896347.1 CDS Bphyt_2729 NC_010681.1 3082360 3083745 R PFAM: sodium:dicarboxylate symporter; KEGG: bxe:Bxe_A4197 C4-dicarboxylate transporter DctA; sodium:dicarboxylate symporter complement(3082360..3083745) Burkholderia phytofirmans PsJN 6284254 YP_001896348.1 CDS Bphyt_2730 NC_010681.1 3083846 3084457 R KEGG: mms:mma_2344 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit complement(3083846..3084457) Burkholderia phytofirmans PsJN 6284255 YP_001896349.1 CDS Bphyt_2731 NC_010681.1 3084454 3085869 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(3084454..3085869) Burkholderia phytofirmans PsJN 6284256 YP_001896350.1 CDS Bphyt_2732 NC_010681.1 3085887 3086765 R PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_0202 alpha/beta hydrolase fold; alpha/beta fold family hydrolase complement(3085887..3086765) Burkholderia phytofirmans PsJN 6284257 YP_001896351.1 CDS Bphyt_2733 NC_010681.1 3086860 3087762 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpt:Bpet4776 transcriptional regulator, LysR-family; LysR family transcriptional regulator 3086860..3087762 Burkholderia phytofirmans PsJN 6284258 YP_001896352.1 CDS Bphyt_2734 NC_010681.1 3087775 3087966 R hypothetical protein complement(3087775..3087966) Burkholderia phytofirmans PsJN 6283924 YP_001896353.1 CDS Bphyt_2735 NC_010681.1 3088029 3088937 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1392 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3088029..3088937) Burkholderia phytofirmans PsJN 6283925 YP_001896354.1 CDS Bphyt_2736 NC_010681.1 3089080 3091200 D PFAM: enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bxe:Bxe_A1391 enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase 3089080..3091200 Burkholderia phytofirmans PsJN 6283926 YP_001896355.1 CDS Bphyt_2737 NC_010681.1 3091286 3092494 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A1390 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3091286..3092494 Burkholderia phytofirmans PsJN 6283927 YP_001896356.1 CDS Bphyt_2738 NC_010681.1 3092508 3093635 D PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A1389 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3092508..3093635 Burkholderia phytofirmans PsJN 6283928 YP_001896357.1 CDS Bphyt_2739 NC_010681.1 3093706 3094179 D PFAM: regulatory protein MarR; KEGG: sus:acid_6422 MarR family transcriptional regulator; MarR family transcriptional regulator 3093706..3094179 Burkholderia phytofirmans PsJN 6283929 YP_001896358.1 CDS Bphyt_2740 NC_010681.1 3094303 3094779 R TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: bxe:Bxe_A3137 bacterioferritin; bacterioferritin complement(3094303..3094779) Burkholderia phytofirmans PsJN 6283930 YP_001896359.1 CDS Bphyt_2741 NC_010681.1 3095487 3097286 D PFAM: cytochrome P450; Rieske [2Fe-2S] domain protein; KEGG: scl:sce5725 hypothetical protein; cytochrome P450 3095487..3097286 Burkholderia phytofirmans PsJN 6282171 YP_001896360.1 CDS Bphyt_2742 NC_010681.1 3097325 3098623 R PFAM: FAD dependent oxidoreductase; KEGG: bam:Bamb_5578 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(3097325..3098623) Burkholderia phytofirmans PsJN 6282172 YP_001896361.1 CDS Bphyt_2743 NC_010681.1 3098632 3099378 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bam:Bamb_5577 ABC transporter; ABC transporter complement(3098632..3099378) Burkholderia phytofirmans PsJN 6282173 YP_001896362.1 CDS Bphyt_2744 NC_010681.1 3099375 3100031 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bam:Bamb_5576 polar amino acid ABC transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(3099375..3100031) Burkholderia phytofirmans PsJN 6282174 YP_001896363.1 CDS Bphyt_2745 NC_010681.1 3100061 3100825 R PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_5575 extracellular solute-binding protein, family 3; family 3 extracellular solute-binding protein complement(3100061..3100825) Burkholderia phytofirmans PsJN 6282175 YP_001896364.1 CDS Bphyt_2746 NC_010681.1 3100980 3101804 D PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: bam:Bamb_5574 IclR family transcriptional regulator; IclR family transcriptional regulator 3100980..3101804 Burkholderia phytofirmans PsJN 6282176 YP_001896365.1 CDS Bphyt_2747 NC_010681.1 3101849 3102421 R PFAM: thioesterase superfamily protein; KEGG: bba:Bd0666 hypothetical protein; thioesterase superfamily protein complement(3101849..3102421) Burkholderia phytofirmans PsJN 6282177 YP_001896366.1 CDS Bphyt_2748 NC_010681.1 3102623 3102760 R hypothetical protein complement(3102623..3102760) Burkholderia phytofirmans PsJN 6284142 YP_001896367.1 CDS Bphyt_2749 NC_010681.1 3103303 3103716 R PFAM: regulatory protein MerR; KEGG: bxe:Bxe_A1378 MerR family transcriptional regulator; MerR family transcriptional regulator complement(3103303..3103716) Burkholderia phytofirmans PsJN 6284144 YP_001896368.1 CDS ihfA NC_010681.1 3103763 3104173 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha complement(3103763..3104173) Burkholderia phytofirmans PsJN 6284145 YP_001896369.1 CDS pheT NC_010681.1 3104243 3106678 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(3104243..3106678) Burkholderia phytofirmans PsJN 6284146 YP_001896370.1 CDS Bphyt_2752 NC_010681.1 3106841 3107854 R TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; KEGG: bxe:Bxe_A1375 phenylalanyl-tRNA synthetase subunit alpha; phenylalanyl-tRNA synthetase subunit alpha complement(3106841..3107854) Burkholderia phytofirmans PsJN 6283943 YP_001896371.1 CDS rplT NC_010681.1 3108013 3108372 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(3108013..3108372) Burkholderia phytofirmans PsJN 6283944 YP_001896372.1 CDS rpmI NC_010681.1 3108402 3108599 R PFAM: ribosomal protein L35; KEGG: bxe:Bxe_A1373 50S ribosomal protein L35; 50S ribosomal protein L35 complement(3108402..3108599) Burkholderia phytofirmans PsJN 6283945 YP_001896373.1 CDS Bphyt_2755 NC_010681.1 3108846 3109316 R TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: bxe:Bxe_A1372 initiation factor 3; translation initiation factor IF-3 complement(3108846..3109316) Burkholderia phytofirmans PsJN 6283946 YP_001896374.1 CDS thrS NC_010681.1 3109420 3111327 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(3109420..3111327) Burkholderia phytofirmans PsJN 6283947 YP_001896375.1 CDS Bphyt_2757 NC_010681.1 3111788 3114031 R KEGG: bxe:Bxe_A1370 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; (p)ppGpp synthetase I SpoT/RelA complement(3111788..3114031) Burkholderia phytofirmans PsJN 6283949 YP_001896376.1 CDS Bphyt_2758 NC_010681.1 3114090 3114443 R PFAM: endoribonuclease L-PSP; KEGG: bxe:Bxe_A1369 hypothetical protein; endoribonuclease L-PSP complement(3114090..3114443) Burkholderia phytofirmans PsJN 6283434 YP_001896377.1 CDS Bphyt_2759 NC_010681.1 3114527 3115441 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1368 hydrolase; alpha/beta fold family hydrolase complement(3114527..3115441) Burkholderia phytofirmans PsJN 6283435 YP_001896378.1 CDS Bphyt_2760 NC_010681.1 3115729 3116370 R KEGG: bxe:Bxe_A1367 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase subunit beta; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(3115729..3116370) Burkholderia phytofirmans PsJN 6283436 YP_001896379.1 CDS Bphyt_2761 NC_010681.1 3116373 3117077 R KEGG: bxe:Bxe_A1366 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit alpha; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(3116373..3117077) Burkholderia phytofirmans PsJN 6283437 YP_001896380.1 CDS Bphyt_2762 NC_010681.1 3117321 3117866 D KEGG: bxe:Bxe_A1365 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; SMART: PAS domain containing protein; LuxR family transcriptional regulator 3117321..3117866 Burkholderia phytofirmans PsJN 6283438 YP_001896381.1 CDS Bphyt_2763 NC_010681.1 3118009 3118407 R PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A1364 thioesterase; thioesterase superfamily protein complement(3118009..3118407) Burkholderia phytofirmans PsJN 6284739 YP_001896382.1 CDS Bphyt_2764 NC_010681.1 3118628 3119404 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A1363 short chain dehydrogenase; short chain dehydrogenase complement(3118628..3119404) Burkholderia phytofirmans PsJN 6284740 YP_001896383.1 CDS Bphyt_2765 NC_010681.1 3119592 3121265 D PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: bxe:Bxe_B0378 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 3119592..3121265 Burkholderia phytofirmans PsJN 6284741 YP_001896384.1 CDS Bphyt_2766 NC_010681.1 3121331 3122809 R PFAM: hypothetical protein; KEGG: bxe:Bxe_A1361 hypothetical protein; hypothetical protein complement(3121331..3122809) Burkholderia phytofirmans PsJN 6284742 YP_001896385.1 CDS Bphyt_2767 NC_010681.1 3122861 3123961 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(3122861..3123961) Burkholderia phytofirmans PsJN 6284743 YP_001896386.1 CDS Bphyt_2768 NC_010681.1 3124335 3126272 R PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1359 bifunctional - major facilitator superfamily (MFS) lysophospholipid exporter/2-acylglycerolphosphoethanolamine acyltransferase; phospholipid/glycerol acyltransferase complement(3124335..3126272) Burkholderia phytofirmans PsJN 6284744 YP_001896387.1 CDS Bphyt_2769 NC_010681.1 3126552 3127013 R PFAM: hypothetical protein; KEGG: bxe:Bxe_A1358 hypothetical protein; hypothetical protein complement(3126552..3127013) Burkholderia phytofirmans PsJN 6284745 YP_001896388.1 CDS Bphyt_2770 NC_010681.1 3127236 3128606 D catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 3127236..3128606 Burkholderia phytofirmans PsJN 6284520 YP_001896389.1 CDS Bphyt_2771 NC_010681.1 3128603 3129436 D PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1356 alpha/beta hydrolase fold protein; alpha/beta fold family hydrolase 3128603..3129436 Burkholderia phytofirmans PsJN 6284521 YP_001896390.1 CDS Bphyt_2772 NC_010681.1 3129615 3129935 D KEGG: bxe:Bxe_A1355 hypothetical protein; hypothetical protein 3129615..3129935 Burkholderia phytofirmans PsJN 6284522 YP_001896391.1 CDS Bphyt_2773 NC_010681.1 3129978 3131291 R PFAM: ribonuclease BN; KEGG: bxe:Bxe_A1354 ribonuclease BN; ribonuclease BN complement(3129978..3131291) Burkholderia phytofirmans PsJN 6284523 YP_001896392.1 CDS Bphyt_2774 NC_010681.1 3131410 3132012 D TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; KEGG: bxe:Bxe_A1353 Trp repressor binding protein; flavoprotein WrbA 3131410..3132012 Burkholderia phytofirmans PsJN 6284524 YP_001896393.1 CDS Bphyt_2775 NC_010681.1 3132009 3132545 D KEGG: bxe:Bxe_A1352 hypothetical protein; hypothetical protein 3132009..3132545 Burkholderia phytofirmans PsJN 6284525 YP_001896394.1 CDS Bphyt_2776 NC_010681.1 3132600 3134018 D PFAM: FAD linked oxidase; KEGG: bxe:Bxe_A1351 FAD-binding oxidoreductase; FAD linked oxidase 3132600..3134018 Burkholderia phytofirmans PsJN 6284526 YP_001896395.1 CDS Bphyt_2777 NC_010681.1 3134069 3134875 D PFAM: metallophosphoesterase; KEGG: bxe:Bxe_A1350 calcineurin-like phosphoesterase; metallophosphoesterase 3134069..3134875 Burkholderia phytofirmans PsJN 6283415 YP_001896396.1 CDS Bphyt_2778 NC_010681.1 3135010 3135732 D PFAM: protein of unknown function DUF159; KEGG: bxe:Bxe_A1349 hypothetical protein; hypothetical protein 3135010..3135732 Burkholderia phytofirmans PsJN 6283416 YP_001896397.1 CDS Bphyt_2779 NC_010681.1 3135905 3136063 R KEGG: bxe:Bxe_A1348 hypothetical protein; hypothetical protein complement(3135905..3136063) Burkholderia phytofirmans PsJN 6283417 YP_001896398.1 CDS Bphyt_2780 NC_010681.1 3136284 3137222 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1347 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3136284..3137222) Burkholderia phytofirmans PsJN 6283418 YP_001896399.1 CDS Bphyt_2781 NC_010681.1 3137378 3139192 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A1346 aromatic acid efflux system, outer membrane lipoprotein; NodT family RND efflux system outer membrane lipoprotein 3137378..3139192 Burkholderia phytofirmans PsJN 6283419 YP_001896400.1 CDS Bphyt_2782 NC_010681.1 3139195 3141414 D PFAM: fusaric acid resistance protein conserved region; KEGG: bxe:Bxe_A1345 aromatic acid exporter, (ArAE) family(fusaric acid resistance protein); fusaric acid resistance protein 3139195..3141414 Burkholderia phytofirmans PsJN 6283420 YP_001896401.1 CDS Bphyt_2783 NC_010681.1 3141404 3141604 D PFAM: protein of unknown function DUF1656; KEGG: bxe:Bxe_A1344 hypothetical protein; hypothetical protein 3141404..3141604 Burkholderia phytofirmans PsJN 6283364 YP_001896402.1 CDS Bphyt_2784 NC_010681.1 3141618 3142496 D PFAM: secretion protein HlyD; KEGG: bxe:Bxe_A1343 aromatic acid efflux system, membrane fusion protein, EmrA subfamily; secretion protein HlyD 3141618..3142496 Burkholderia phytofirmans PsJN 6283365 YP_001896403.1 CDS Bphyt_2785 NC_010681.1 3142682 3142945 R KEGG: bur:Bcep18194_A4102 hypothetical protein; hypothetical protein complement(3142682..3142945) Burkholderia phytofirmans PsJN 6283366 YP_001896404.1 CDS Bphyt_2786 NC_010681.1 3142956 3143870 R KEGG: bur:Bcep18194_A4101 hypothetical protein; hypothetical protein complement(3142956..3143870) Burkholderia phytofirmans PsJN 6283367 YP_001896405.1 CDS Bphyt_2787 NC_010681.1 3143867 3145057 R KEGG: bur:Bcep18194_A4100 hypothetical protein; hypothetical protein complement(3143867..3145057) Burkholderia phytofirmans PsJN 6283368 YP_001896406.1 CDS Bphyt_2788 NC_010681.1 3145085 3147754 R TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: bxe:Bxe_B2595 rhs element Vgr protein; ImpA family type VI secretion-associated protein complement(3145085..3147754) Burkholderia phytofirmans PsJN 6283369 YP_001896407.1 CDS Bphyt_2789 NC_010681.1 3147786 3149714 R TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: bam:Bamb_3469 protein of unknown function DUF879; type VI secretion protein complement(3147786..3149714) Burkholderia phytofirmans PsJN 6283370 YP_001896408.1 CDS Bphyt_2790 NC_010681.1 3149809 3150096 D hypothetical protein 3149809..3150096 Burkholderia phytofirmans PsJN 6280887 YP_001896409.1 CDS Bphyt_2791 NC_010681.1 3150288 3150755 D hypothetical protein 3150288..3150755 Burkholderia phytofirmans PsJN 6280888 YP_001896410.1 CDS Bphyt_2792 NC_010681.1 3150797 3151039 D hypothetical protein 3150797..3151039 Burkholderia phytofirmans PsJN 6280889 YP_001896411.1 CDS Bphyt_2793 NC_010681.1 3151089 3152810 R PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_A1341 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3151089..3152810) Burkholderia phytofirmans PsJN 6280890 YP_001896412.1 CDS Bphyt_2794 NC_010681.1 3153302 3154561 D PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1340 major facilitator superfamily (MFS) multidrug (fosmidomycin) efflux pump; major facilitator superfamily protein 3153302..3154561 Burkholderia phytofirmans PsJN 6280891 YP_001896413.1 CDS prpE NC_010681.1 3154828 3156732 D catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; propionyl-CoA synthetase 3154828..3156732 Burkholderia phytofirmans PsJN 6280892 YP_001896414.1 CDS Bphyt_2796 NC_010681.1 3156806 3157756 R enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(3156806..3157756) Burkholderia phytofirmans PsJN 6280893 YP_001896415.1 CDS Bphyt_2797 NC_010681.1 3157753 3160104 R PFAM: UvrD/REP helicase; KEGG: bxe:Bxe_A1337 DNA helicase II protein; UvrD/REP helicase complement(3157753..3160104) Burkholderia phytofirmans PsJN 6284227 YP_001896416.1 CDS Bphyt_2798 NC_010681.1 3160379 3161514 D PFAM: transposase IS3/IS911 family protein; KEGG: bps:BPSS2148a transposase; transposase IS3/IS911 family protein join(3160379..3160633,3160633..3161514) Burkholderia phytofirmans PsJN 6284228 YP_001896417.1 CDS valS NC_010681.1 3162339 3165218 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 3162339..3165218 Burkholderia phytofirmans PsJN 6284229 YP_001896418.1 CDS Bphyt_2800 NC_010681.1 3165289 3166170 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: bxe:Bxe_A1334 UTP--glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 3165289..3166170 Burkholderia phytofirmans PsJN 6284230 YP_001896419.1 CDS Bphyt_2801 NC_010681.1 3166300 3166533 R PFAM: SirA family protein; KEGG: bxe:Bxe_A1333 hypothetical protein; SirA family protein complement(3166300..3166533) Burkholderia phytofirmans PsJN 6284231 YP_001896420.1 CDS Bphyt_2802 NC_010681.1 3166747 3167882 R PFAM: transposase IS3/IS911 family protein; KEGG: bps:BPSS2148a transposase; transposase IS3/IS911 family protein complement(join(3166747..3167628,3167628..3167882)) Burkholderia phytofirmans PsJN 6284232 YP_001896421.1 CDS Bphyt_2803 NC_010681.1 3168671 3169720 R PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bxe:Bxe_A1332 oxidoreductase; oxidoreductase domain-containing protein complement(3168671..3169720) Burkholderia phytofirmans PsJN 6282752 YP_001896422.1 CDS Bphyt_2804 NC_010681.1 3169720 3170736 R PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bxe:Bxe_A1331 myo-inositol 2-dehydrogenase; inositol 2-dehydrogenase complement(3169720..3170736) Burkholderia phytofirmans PsJN 6282753 YP_001896423.1 CDS Bphyt_2805 NC_010681.1 3170729 3171610 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_A1330 RpiR family transcriptional regulator; RpiR family transcriptional regulator complement(3170729..3171610) Burkholderia phytofirmans PsJN 6282754 YP_001896424.1 CDS Bphyt_2806 NC_010681.1 3171888 3172934 D KEGG: bxe:Bxe_A1329 ABC sugar transporter periplasmic ligand binding protein; sugar ABC transporter substrate-binding protein 3171888..3172934 Burkholderia phytofirmans PsJN 6282755 YP_001896425.1 CDS Bphyt_2807 NC_010681.1 3173082 3174239 D PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1328 ABC sugar transporter inner membrane subunit; sugar ABC transporter ATPase 3173082..3174239 Burkholderia phytofirmans PsJN 6282756 YP_001896426.1 CDS Bphyt_2808 NC_010681.1 3174253 3175119 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A1327 ABC sugar transporter ATPase; ABC transporter 3174253..3175119 Burkholderia phytofirmans PsJN 6282757 YP_001896427.1 CDS Bphyt_2809 NC_010681.1 3175184 3177229 D PFAM: PfkB domain protein; KEGG: bxe:Bxe_A1326 myo-inositol catabolism LolC protein; PfkB domain-containing protein 3175184..3177229 Burkholderia phytofirmans PsJN 6282758 YP_001896428.1 CDS Bphyt_2810 NC_010681.1 3177226 3179199 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_A1325 myo-inositol catabolism LolD protein; thiamine pyrophosphate protein central region 3177226..3179199 Burkholderia phytofirmans PsJN 6281655 YP_001896429.1 CDS Bphyt_2811 NC_010681.1 3179210 3180127 D PFAM: xylose isomerase; KEGG: bxe:Bxe_A1324 myo-inositol catabolism LolE protein; xylose isomerase 3179210..3180127 Burkholderia phytofirmans PsJN 6281656 YP_001896430.1 CDS Bphyt_2812 NC_010681.1 3180124 3180924 D PFAM: myo-inositol catabolism IolB domain protein; KEGG: bxe:Bxe_A1323 myo-inositol catabolism LolB protein; myo-inositol catabolism IolB domain-containing protein 3180124..3180924 Burkholderia phytofirmans PsJN 6281657 YP_001896431.1 CDS Bphyt_2813 NC_010681.1 3180966 3183323 R PFAM: protein of unknown function DUF811; KEGG: bxe:Bxe_A1322 exported lipoprotein; hypothetical protein complement(3180966..3183323) Burkholderia phytofirmans PsJN 6281658 YP_001896432.1 CDS Bphyt_2814 NC_010681.1 3183715 3184428 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A1321 ABC branched chain amino acid family transporter ATPase subunit; branched-chain amino acid ABC transporter ATPase complement(3183715..3184428) Burkholderia phytofirmans PsJN 6281659 YP_001896433.1 CDS Bphyt_2815 NC_010681.1 3184425 3185177 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A1320 ABC branched chain amino acid family transporter ATPase subunit; branched-chain amino acid ABC transporter ATPase complement(3184425..3185177) Burkholderia phytofirmans PsJN 6281660 YP_001896434.1 CDS Bphyt_2816 NC_010681.1 3185174 3185341 R hypothetical protein complement(3185174..3185341) Burkholderia phytofirmans PsJN 6282982 YP_001896435.1 CDS Bphyt_2817 NC_010681.1 3185338 3186630 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1319 ABC branched chain amino acid family transporter inner membrane subunit; branched-chain amino acid ABC transporter inner membrane protein complement(3185338..3186630) Burkholderia phytofirmans PsJN 6282983 YP_001896436.1 CDS Bphyt_2818 NC_010681.1 3186623 3187561 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1318 ABC branched chain amino acid family transporter inner membrane subunit; branched-chain amino acid ABC transporter inner membrane protein complement(3186623..3187561) Burkholderia phytofirmans PsJN 6282984 YP_001896437.1 CDS Bphyt_2819 NC_010681.1 3187566 3188015 R PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A1317 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein complement(3187566..3188015) Burkholderia phytofirmans PsJN 6282985 YP_001896438.1 CDS Bphyt_2820 NC_010681.1 3188170 3188700 R PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A1315 phosphatase; NUDIX hydrolase complement(3188170..3188700) Burkholderia phytofirmans PsJN 6282986 YP_001896439.1 CDS Bphyt_2821 NC_010681.1 3189017 3190048 R PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bxe:Bxe_A1314 threonine aldolase; threonine aldolase complement(3189017..3190048) Burkholderia phytofirmans PsJN 6282987 YP_001896440.1 CDS Bphyt_2822 NC_010681.1 3190174 3191439 R PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1313 major facilitator superfamily (MFS) transporter; hypothetical protein complement(3190174..3191439) Burkholderia phytofirmans PsJN 6282988 YP_001896441.1 CDS Bphyt_2823 NC_010681.1 3191554 3192471 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1312 LysR family transcriptional regulator; LysR family transcriptional regulator 3191554..3192471 Burkholderia phytofirmans PsJN 6283219 YP_001896442.1 CDS alaS NC_010681.1 3192643 3195267 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(3192643..3195267) Burkholderia phytofirmans PsJN 6283220 YP_001896443.1 CDS Bphyt_2825 NC_010681.1 3195644 3196864 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A1310 alpha-methylacyl-CoA racemase; L-carnitine dehydratase/bile acid-inducible protein F 3195644..3196864 Burkholderia phytofirmans PsJN 6283221 YP_001896444.1 CDS Bphyt_2826 NC_010681.1 3196974 3197534 R PFAM: protein of unknown function DUF1234; KEGG: bxe:Bxe_A1309 hypothetical protein; hypothetical protein complement(3196974..3197534) Burkholderia phytofirmans PsJN 6283222 YP_001896445.1 CDS Bphyt_2827 NC_010681.1 3197623 3199377 R KEGG: bxe:Bxe_A1308 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(3197623..3199377) Burkholderia phytofirmans PsJN 6283223 YP_001896446.1 CDS Bphyt_2828 NC_010681.1 3199941 3201650 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 3199941..3201650 Burkholderia phytofirmans PsJN 6283224 YP_001896447.1 CDS Bphyt_2829 NC_010681.1 3201791 3202765 D PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A1306 ABC glutamate/aspartate transporter periplasmic ligand binding protein; family 3 extracellular solute-binding protein 3201791..3202765 Burkholderia phytofirmans PsJN 6283225 YP_001896448.1 CDS Bphyt_2830 NC_010681.1 3202792 3203241 R PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A1305 NUDIX family hydrolase; NUDIX hydrolase complement(3202792..3203241) Burkholderia phytofirmans PsJN 6282929 YP_001896449.1 CDS Bphyt_2831 NC_010681.1 3203348 3203737 R KEGG: bxe:Bxe_A1304 hypothetical protein; hypothetical protein complement(3203348..3203737) Burkholderia phytofirmans PsJN 6282930 YP_001896450.1 CDS Bphyt_2832 NC_010681.1 3204024 3204263 D KEGG: bxe:Bxe_A1303 hypothetical protein; hypothetical protein 3204024..3204263 Burkholderia phytofirmans PsJN 6282931 YP_001896451.1 CDS Bphyt_2833 NC_010681.1 3204312 3205694 R PFAM: Di-haem cytochrome C peroxidase; KEGG: bxe:Bxe_A1302 di-haem cytochrome C peroxidase; di-heme cytochrome C peroxidase complement(3204312..3205694) Burkholderia phytofirmans PsJN 6282932 YP_001896452.1 CDS Bphyt_2834 NC_010681.1 3205905 3207521 D TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: bxe:Bxe_A1301 acid phosphatase; acid phosphatase 3205905..3207521 Burkholderia phytofirmans PsJN 6282933 YP_001896453.1 CDS Bphyt_2835 NC_010681.1 3207769 3208152 D PFAM: protein of unknown function DUF427; KEGG: bxe:Bxe_A1300 hypothetical protein; hypothetical protein 3207769..3208152 Burkholderia phytofirmans PsJN 6282934 YP_001896454.1 CDS Bphyt_2836 NC_010681.1 3208341 3208799 R PFAM: UspA domain protein; KEGG: pau:PA14_27450 universal stress protein; UspA domain-containing protein complement(3208341..3208799) Burkholderia phytofirmans PsJN 6281152 YP_001896455.1 CDS Bphyt_2837 NC_010681.1 3209328 3210158 R phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(3209328..3210158) Burkholderia phytofirmans PsJN 6281154 YP_001896456.1 CDS Bphyt_2838 NC_010681.1 3210683 3211654 D PFAM: aldose 1-epimerase; KEGG: bxe:Bxe_A1297 hypothetical protein; aldose 1-epimerase 3210683..3211654 Burkholderia phytofirmans PsJN 6281155 YP_001896457.1 CDS Bphyt_2839 NC_010681.1 3211851 3212561 D PFAM: peptidoglycan-binding LysM; peptidase M23; KEGG: bxe:Bxe_A1296 peptidoglycan-binding LysM/peptidase M23B; peptidase M23 3211851..3212561 Burkholderia phytofirmans PsJN 6281156 YP_001896458.1 CDS Bphyt_2840 NC_010681.1 3212774 3213100 D KEGG: bxe:Bxe_A1295 hypothetical protein; hypothetical protein 3212774..3213100 Burkholderia phytofirmans PsJN 6281157 YP_001896459.1 CDS Bphyt_2841 NC_010681.1 3213130 3213237 R hypothetical protein complement(3213130..3213237) Burkholderia phytofirmans PsJN 6283931 YP_001896460.1 CDS Bphyt_2842 NC_010681.1 3213924 3214652 R PFAM: pentapeptide repeat protein; KEGG: bxe:Bxe_A1294 hypothetical protein; pentapeptide repeat-containing protein complement(3213924..3214652) Burkholderia phytofirmans PsJN 6283932 YP_001896461.1 CDS Bphyt_2843 NC_010681.1 3214761 3215069 D KEGG: bxe:Bxe_A1293 hypothetical protein; hypothetical protein 3214761..3215069 Burkholderia phytofirmans PsJN 6283933 YP_001896462.1 CDS Bphyt_2844 NC_010681.1 3215066 3216433 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bxe:Bxe_A1292 multi antimicrobial extrusion protein MatE; MATE efflux family protein 3215066..3216433 Burkholderia phytofirmans PsJN 6283934 YP_001896463.1 CDS Bphyt_2845 NC_010681.1 3216643 3216813 R KEGG: bxe:Bxe_A1291 hypothetical protein; hypothetical protein complement(3216643..3216813) Burkholderia phytofirmans PsJN 6283935 YP_001896464.1 CDS Bphyt_2846 NC_010681.1 3216995 3217168 D KEGG: bpd:BURPS668_1504 hypothetical protein; hypothetical protein 3216995..3217168 Burkholderia phytofirmans PsJN 6283936 YP_001896465.1 CDS Bphyt_2847 NC_010681.1 3217533 3217691 D KEGG: bxe:Bxe_A1288 hypothetical protein; hypothetical protein 3217533..3217691 Burkholderia phytofirmans PsJN 6284674 YP_001896466.1 CDS Bphyt_2848 NC_010681.1 3218098 3218556 D TIGRFAM: phosphohistidine phosphatase SixA; PFAM: phosphoglycerate mutase; KEGG: bxe:Bxe_A1276 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase, SixA 3218098..3218556 Burkholderia phytofirmans PsJN 6284676 YP_001896467.1 CDS Bphyt_2849 NC_010681.1 3218884 3219696 D KEGG: bxe:Bxe_A1275 hypothetical protein; hypothetical protein 3218884..3219696 Burkholderia phytofirmans PsJN 6284677 YP_001896468.1 CDS Bphyt_2850 NC_010681.1 3219816 3221327 R PFAM: Ppx/GppA phosphatase; KEGG: bxe:Bxe_A1274 Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(3219816..3221327) Burkholderia phytofirmans PsJN 6284678 YP_001896469.1 CDS Bphyt_2851 NC_010681.1 3221651 3223714 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3221651..3223714 Burkholderia phytofirmans PsJN 6284679 YP_001896470.1 CDS Bphyt_2852 NC_010681.1 3223814 3225127 R KEGG: bxe:Bxe_A1272 phosphate sensor signal transduction histidine kinase, PhoR; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(3223814..3225127) Burkholderia phytofirmans PsJN 6280846 YP_001896471.1 CDS Bphyt_2853 NC_010681.1 3225241 3225942 R TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A1271 two component transcriptional regulator, phosphate regulon, winged helix family, PhoB; winged helix family two component transcriptional regulator complement(3225241..3225942) Burkholderia phytofirmans PsJN 6280847 YP_001896472.1 CDS Bphyt_2854 NC_010681.1 3225969 3226673 R TIGRFAM: phosphate transporter regulatory protein PhoU; PFAM: PhoU family protein; KEGG: bxe:Bxe_A1270 phosphate transport regulator, PhoU; phosphate uptake regulator PhoU complement(3225969..3226673) Burkholderia phytofirmans PsJN 6280848 YP_001896473.1 CDS Bphyt_2855 NC_010681.1 3226702 3227550 R KEGG: bxe:Bxe_A1269 ABC phosphate transporter ATPase subunit, PstB; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA; phosphate ABC transporter ATPase complement(3226702..3227550) Burkholderia phytofirmans PsJN 6280849 YP_001896474.1 CDS pstA NC_010681.1 3227568 3228464 R Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA complement(3227568..3228464) Burkholderia phytofirmans PsJN 6280850 YP_001896475.1 CDS pstC NC_010681.1 3228461 3229462 R part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC complement(3228461..3229462) Burkholderia phytofirmans PsJN 6280851 YP_001896476.1 CDS Bphyt_2858 NC_010681.1 3229611 3230642 R TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A1266 ABC phosphate transporter periplasmic ligand binding protein, PstS; phosphate ABC transporter substrate-binding protein complement(3229611..3230642) Burkholderia phytofirmans PsJN 6280852 YP_001896477.1 CDS Bphyt_2859 NC_010681.1 3231180 3232457 R PFAM: transposase mutator type; KEGG: bcm:Bcenmc03_6788 transposase mutator type; transposase mutator type complement(3231180..3232457) Burkholderia phytofirmans PsJN 6281031 YP_001896478.1 CDS Bphyt_2860 NC_010681.1 3232571 3233929 R TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bxe:Bxe_A1264 phosphoglucosamine mutase; phosphoglucosamine mutase complement(3232571..3233929) Burkholderia phytofirmans PsJN 6281032 YP_001896479.1 CDS Bphyt_2861 NC_010681.1 3233958 3234857 R KEGG: bxe:Bxe_A1263 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase complement(3233958..3234857) Burkholderia phytofirmans PsJN 6281033 YP_001896480.1 CDS Bphyt_2862 NC_010681.1 3234940 3236829 R KEGG: bxe:Bxe_A1262 peptidase M41, FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA central domain protein; peptidase M41 FtsH extracellular; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH complement(3234940..3236829) Burkholderia phytofirmans PsJN 6281034 YP_001896481.1 CDS Bphyt_2863 NC_010681.1 3237018 3237680 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bxe:Bxe_A1261 ribosomal RNA large subunit methyltransferase; ribosomal RNA methyltransferase RrmJ/FtsJ complement(3237018..3237680) Burkholderia phytofirmans PsJN 6281035 YP_001896482.1 CDS Bphyt_2864 NC_010681.1 3237864 3238391 D PFAM: protein of unknown function UPF0044; KEGG: bxe:Bxe_A1260 hypothetical protein; hypothetical protein 3237864..3238391 Burkholderia phytofirmans PsJN 6281036 YP_001896483.1 CDS Bphyt_2865 NC_010681.1 3238537 3239046 R KEGG: bxe:Bxe_A1259 hypothetical protein; hypothetical protein complement(3238537..3239046) Burkholderia phytofirmans PsJN 6283870 YP_001896484.1 CDS greA NC_010681.1 3239067 3239543 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(3239067..3239543) Burkholderia phytofirmans PsJN 6283871 YP_001896485.1 CDS carB NC_010681.1 3239695 3242949 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(3239695..3242949) Burkholderia phytofirmans PsJN 6283872 YP_001896486.1 CDS Bphyt_2868 NC_010681.1 3243170 3244324 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(3243170..3244324) Burkholderia phytofirmans PsJN 6283873 YP_001896487.1 CDS Bphyt_2869 NC_010681.1 3244818 3246059 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1255 major facilitator family (MFS)tranporter; major facilitator superfamily protein complement(3244818..3246059) Burkholderia phytofirmans PsJN 6283874 YP_001896488.1 CDS Bphyt_2870 NC_010681.1 3246270 3247964 R PFAM: peptidoglycan-binding LysM; lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: bxe:Bxe_A1254 membrane-bound lytic murein transglycosylase; lytic transglycosylase complement(3246270..3247964) Burkholderia phytofirmans PsJN 6283875 YP_001896489.1 CDS Bphyt_2871 NC_010681.1 3248121 3248912 R KEGG: bxe:Bxe_A1253 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase complement(3248121..3248912) Burkholderia phytofirmans PsJN 6283876 YP_001896490.1 CDS Bphyt_2872 NC_010681.1 3248932 3249795 D PFAM: methyltransferase type 11; KEGG: bxe:Bxe_A1252 hypothetical protein; type 11 methyltransferase 3248932..3249795 Burkholderia phytofirmans PsJN 6281901 YP_001896491.1 CDS Bphyt_2873 NC_010681.1 3249792 3250238 D PFAM: ribonuclease H; KEGG: bxe:Bxe_A1251 ribonuclease H; ribonuclease H 3249792..3250238 Burkholderia phytofirmans PsJN 6281902 YP_001896492.1 CDS Bphyt_2874 NC_010681.1 3250319 3251053 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 3250319..3251053 Burkholderia phytofirmans PsJN 6281903 YP_001896493.1 CDS Bphyt_2875 NC_010681.1 3251689 3253566 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; KEGG: bxe:Bxe_A1248 ABC multidrug efflux pump, fused ATPase and inner membrane subunits; ABC transporter 3251689..3253566 Burkholderia phytofirmans PsJN 6281905 YP_001896494.1 CDS Bphyt_2876 NC_010681.1 3253814 3254278 R KEGG: bxe:Bxe_A1247 hypothetical protein; hypothetical protein complement(3253814..3254278) Burkholderia phytofirmans PsJN 6281037 YP_001896495.1 CDS Bphyt_2877 NC_010681.1 3254430 3255290 R KEGG: bxe:Bxe_A1246 hypothetical protein; hypothetical protein complement(3254430..3255290) Burkholderia phytofirmans PsJN 6281038 YP_001896496.1 CDS Bphyt_2878 NC_010681.1 3255531 3256595 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A1245 glycosyl transferase, group 1; group 1 glycosyl transferase complement(3255531..3256595) Burkholderia phytofirmans PsJN 6281039 YP_001896497.1 CDS Bphyt_2879 NC_010681.1 3257190 3259121 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; KEGG: bxe:Bxe_A1243 ABC multidrug efflux pump, fused ATPase and inner membrane subunits; ABC transporter 3257190..3259121 Burkholderia phytofirmans PsJN 6281040 YP_001896498.1 CDS Bphyt_2880 NC_010681.1 3259232 3260692 R KEGG: bxe:Bxe_A1242 alpha,alpha-trehalose-phosphate synthase(UDP-forming); TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase complement(3259232..3260692) Burkholderia phytofirmans PsJN 6281041 YP_001896499.1 CDS Bphyt_2881 NC_010681.1 3260748 3261497 R KEGG: bxe:Bxe_A1241 trehalose-phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; haloacid dehalogenase type 3; HAD family hydrolase complement(3260748..3261497) Burkholderia phytofirmans PsJN 6281042 YP_001896500.1 CDS Bphyt_2882 NC_010681.1 3261905 3262519 D PFAM: electron transporter SCO1/SenC; KEGG: bxe:Bxe_A1240 electron transporter SCO1/SenC; electron transporter SCO1/SenC 3261905..3262519 Burkholderia phytofirmans PsJN 6281043 YP_001896501.1 CDS Bphyt_2883 NC_010681.1 3262538 3262999 D PFAM: protein of unknown function DUF461; KEGG: bxe:Bxe_A1239 hypothetical protein; hypothetical protein 3262538..3262999 Burkholderia phytofirmans PsJN 6283089 YP_001896502.1 CDS Bphyt_2884 NC_010681.1 3263017 3263886 D KEGG: bxe:Bxe_A1238 inner membrane protein; inner membrane protein 3263017..3263886 Burkholderia phytofirmans PsJN 6283090 YP_001896503.1 CDS Bphyt_2885 NC_010681.1 3263947 3264441 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A1237 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(3263947..3264441) Burkholderia phytofirmans PsJN 6283091 YP_001896504.1 CDS Bphyt_2886 NC_010681.1 3264530 3265510 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: pfl:PFL_3308 diguanylate cyclase; GAF sensor-containing diguanylate cyclase complement(3264530..3265510) Burkholderia phytofirmans PsJN 6283092 YP_001896505.1 CDS Bphyt_2887 NC_010681.1 3265702 3266460 R PFAM: GumN family protein; KEGG: bxe:Bxe_A1236 hypothetical protein; GumN family protein complement(3265702..3266460) Burkholderia phytofirmans PsJN 6283093 YP_001896506.1 CDS Bphyt_2888 NC_010681.1 3267798 3268391 R TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bxe:Bxe_A1096 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase complement(3267798..3268391) Burkholderia phytofirmans PsJN 6283648 YP_001896507.1 CDS uvrC NC_010681.1 3268536 3270731 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(3268536..3270731) Burkholderia phytofirmans PsJN 6283649 YP_001896508.1 CDS Bphyt_2890 NC_010681.1 3271000 3272193 D KEGG: bxe:Bxe_A1094 hypothetical protein; hypothetical protein 3271000..3272193 Burkholderia phytofirmans PsJN 6281416 YP_001896509.1 CDS Bphyt_2891 NC_010681.1 3272601 3273158 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3272601..3273158 Burkholderia phytofirmans PsJN 6281417 YP_001896510.1 CDS Bphyt_2892 NC_010681.1 3273440 3273646 D PFAM: CsbD family protein; KEGG: bxe:Bxe_A1092 hypothetical protein; CsbD family protein 3273440..3273646 Burkholderia phytofirmans PsJN 6281418 YP_001896511.1 CDS Bphyt_2893 NC_010681.1 3273972 3275354 D PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bxe:Bxe_A1091 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, fis family; Fis family transcriptional regulator 3273972..3275354 Burkholderia phytofirmans PsJN 6281419 YP_001896512.1 CDS Bphyt_2894 NC_010681.1 3275455 3276483 R hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase complement(3275455..3276483) Burkholderia phytofirmans PsJN 6281420 YP_001896513.1 CDS acpS NC_010681.1 3276553 3276975 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(3276553..3276975) Burkholderia phytofirmans PsJN 6281421 YP_001896514.1 CDS Bphyt_2896 NC_010681.1 3276991 3277755 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(3276991..3277755) Burkholderia phytofirmans PsJN 6281422 YP_001896515.1 CDS recO NC_010681.1 3277752 3278681 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(3277752..3278681) Burkholderia phytofirmans PsJN 6282572 YP_001896516.1 CDS era NC_010681.1 3278668 3279567 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(3278668..3279567) Burkholderia phytofirmans PsJN 6282573 YP_001896517.1 CDS Bphyt_2899 NC_010681.1 3279622 3280878 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(3279622..3280878) Burkholderia phytofirmans PsJN 6282574 YP_001896518.1 CDS Bphyt_2900 NC_010681.1 3281064 3281957 R KEGG: bxe:Bxe_A1084 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I complement(3281064..3281957) Burkholderia phytofirmans PsJN 6282575 YP_001896519.1 CDS Bphyt_2901 NC_010681.1 3281976 3283769 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(3281976..3283769) Burkholderia phytofirmans PsJN 6282576 YP_001896520.1 CDS Bphyt_2902 NC_010681.1 3283974 3284237 R PFAM: glutaredoxin; KEGG: bxe:Bxe_A1082 hypothetical protein; glutaredoxin complement(3283974..3284237) Burkholderia phytofirmans PsJN 6282577 YP_001896521.1 CDS Bphyt_2903 NC_010681.1 3284234 3285751 R KEGG: bxe:Bxe_A1081 subfamily S1C, unassigned peptidase; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(3284234..3285751) Burkholderia phytofirmans PsJN 6284546 YP_001896522.1 CDS Bphyt_2904 NC_010681.1 3285787 3286830 R PFAM: MucB/RseB family protein; KEGG: bxe:Bxe_A1080 sigma E regulatory protein, MucB/RseB; sigma E regulatory protein MucB/RseB complement(3285787..3286830) Burkholderia phytofirmans PsJN 6284547 YP_001896523.1 CDS Bphyt_2905 NC_010681.1 3286835 3287464 R PFAM: anti sigma-E protein RseA family protein; KEGG: bxe:Bxe_A1079 anti sigma-E protein, RseA; anti sigma-E protein, RseA complement(3286835..3287464) Burkholderia phytofirmans PsJN 6284548 YP_001896524.1 CDS Bphyt_2906 NC_010681.1 3287548 3288147 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(3287548..3288147) Burkholderia phytofirmans PsJN 6284549 YP_001896525.1 CDS Bphyt_2907 NC_010681.1 3288249 3288734 R KEGG: bxe:Bxe_A1077 hypothetical protein; hypothetical protein complement(3288249..3288734) Burkholderia phytofirmans PsJN 6284550 YP_001896526.1 CDS Bphyt_2908 NC_010681.1 3288750 3290036 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(3288750..3290036) Burkholderia phytofirmans PsJN 6284551 YP_001896527.1 CDS acpP NC_010681.1 3290221 3290460 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(3290221..3290460) Burkholderia phytofirmans PsJN 6284552 YP_001896528.1 CDS fabG NC_010681.1 3290613 3291362 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(3290613..3291362) Burkholderia phytofirmans PsJN 6282283 YP_001896529.1 CDS Bphyt_2911 NC_010681.1 3291465 3292400 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: bxe:Bxe_A1073 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(3291465..3292400) Burkholderia phytofirmans PsJN 6282284 YP_001896530.1 CDS Bphyt_2912 NC_010681.1 3292512 3293501 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(3292512..3293501) Burkholderia phytofirmans PsJN 6282285 YP_001896531.1 CDS Bphyt_2913 NC_010681.1 3293501 3294607 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(3293501..3294607) Burkholderia phytofirmans PsJN 6282286 YP_001896532.1 CDS rpmF NC_010681.1 3294792 3294971 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(3294792..3294971) Burkholderia phytofirmans PsJN 6282287 YP_001896533.1 CDS Bphyt_2915 NC_010681.1 3295072 3295716 R PFAM: protein of unknown function DUF177; KEGG: bxe:Bxe_A1069 hypothetical protein; hypothetical protein complement(3295072..3295716) Burkholderia phytofirmans PsJN 6282288 YP_001896534.1 CDS Bphyt_2916 NC_010681.1 3295995 3296612 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 3295995..3296612 Burkholderia phytofirmans PsJN 6282289 YP_001896535.1 CDS Bphyt_2917 NC_010681.1 3296609 3297328 D PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bxe:Bxe_A1067 hypothetical protein; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 3296609..3297328 Burkholderia phytofirmans PsJN 6281680 YP_001896536.1 CDS Bphyt_2918 NC_010681.1 3297421 3298425 R PFAM: peptidase S49; KEGG: bxe:Bxe_A1066 family S49 unassigned peptidase; peptidase S49 complement(3297421..3298425) Burkholderia phytofirmans PsJN 6281681 YP_001896537.1 CDS Bphyt_2919 NC_010681.1 3298459 3298863 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_A1065 hypothetical protein; Rieske (2Fe-2S) domain-containing protein complement(3298459..3298863) Burkholderia phytofirmans PsJN 6281682 YP_001896538.1 CDS Bphyt_2920 NC_010681.1 3298860 3299519 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_A1064 haloacid dehalogenase-like hydrolase; HAD family hydrolase complement(3298860..3299519) Burkholderia phytofirmans PsJN 6281683 YP_001896539.1 CDS Bphyt_2921 NC_010681.1 3299512 3300537 R KEGG: bxe:Bxe_A1063 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; pseudouridine synthase complement(3299512..3300537) Burkholderia phytofirmans PsJN 6281684 YP_001896540.1 CDS Bphyt_2922 NC_010681.1 3301267 3304560 D TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: bxe:Bxe_A1062 ribonuclease E and G; Rne/Rng family ribonuclease 3301267..3304560 Burkholderia phytofirmans PsJN 6281685 YP_001896541.1 CDS moaA NC_010681.1 3304770 3305879 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 3304770..3305879 Burkholderia phytofirmans PsJN 6280952 YP_001896542.1 CDS mobA NC_010681.1 3305890 3306504 D Links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 3305890..3306504 Burkholderia phytofirmans PsJN 6280953 YP_001896543.1 CDS Bphyt_2925 NC_010681.1 3306513 3307886 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: bxe:Bxe_A1059 molybdenum cofactor biosynthesis protein; molybdenum cofactor synthesis protein 3306513..3307886 Burkholderia phytofirmans PsJN 6280954 YP_001896544.1 CDS Bphyt_2926 NC_010681.1 3307974 3308249 D KEGG: bxe:Bxe_A1058 hypothetical protein; hypothetical protein 3307974..3308249 Burkholderia phytofirmans PsJN 6280955 YP_001896545.1 CDS Bphyt_2927 NC_010681.1 3308249 3308737 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A1057 acetyltransferase; N-acetyltransferase GCN5 3308249..3308737 Burkholderia phytofirmans PsJN 6280956 YP_001896546.1 CDS Bphyt_2928 NC_010681.1 3308823 3310271 R PFAM: protein of unknown function DUF195; KEGG: bxe:Bxe_A1056 hypothetical protein; hypothetical protein complement(3308823..3310271) Burkholderia phytofirmans PsJN 6280957 YP_001896547.1 CDS Bphyt_2929 NC_010681.1 3310268 3311257 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_A1055 2-ketogluconate reductase; D-isomer specific 2-hydroxyacid dehydrogenase complement(3310268..3311257) Burkholderia phytofirmans PsJN 6280958 YP_001896548.1 CDS Bphyt_2930 NC_010681.1 3311299 3312729 R KEGG: bxe:Bxe_A1054 arsenite-anitmonite efflux pump, ArsB family; ArsB family arsenite-antimonite efflux pump complement(3311299..3312729) Burkholderia phytofirmans PsJN 6284417 YP_001896549.1 CDS Bphyt_2931 NC_010681.1 3312804 3313466 R PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_A1053 hypothetical protein; hypothetical protein complement(3312804..3313466) Burkholderia phytofirmans PsJN 6284418 YP_001896550.1 CDS Bphyt_2932 NC_010681.1 3313608 3314804 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(3313608..3314804) Burkholderia phytofirmans PsJN 6284419 YP_001896551.1 CDS Bphyt_2933 NC_010681.1 3315106 3315429 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bxe:Bxe_A1051 ferredoxin; 4Fe-4S ferredoxin 3315106..3315429 Burkholderia phytofirmans PsJN 6284420 YP_001896552.1 CDS Bphyt_2934 NC_010681.1 3315999 3316475 D PFAM: CreA family protein; KEGG: bxe:Bxe_A1050 hypothetical protein; CreA family protein 3315999..3316475 Burkholderia phytofirmans PsJN 6280999 YP_001896553.1 CDS Bphyt_2935 NC_010681.1 3316574 3317404 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bxe:Bxe_A1049 AraC family transcriptional regulator; AraC family transcriptional regulator 3316574..3317404 Burkholderia phytofirmans PsJN 6281000 YP_001896554.1 CDS Bphyt_2936 NC_010681.1 3317771 3318532 D PFAM: AzlC family protein; KEGG: bxe:Bxe_A1048 branched chain amino acid exporter, LIV-E family; AzlC family protein 3317771..3318532 Burkholderia phytofirmans PsJN 6281001 YP_001896555.1 CDS Bphyt_2937 NC_010681.1 3318529 3318852 D PFAM: branched-chain amino acid ABC transporter; KEGG: bxe:Bxe_A1047 hypothetical protein; branched-chain amino acid ABC transporter 3318529..3318852 Burkholderia phytofirmans PsJN 6281002 YP_001896556.1 CDS Bphyt_2938 NC_010681.1 3319137 3319913 D KEGG: bxe:Bxe_A1046 hypothetical protein; hypothetical protein 3319137..3319913 Burkholderia phytofirmans PsJN 6281003 YP_001896557.1 CDS Bphyt_2939 NC_010681.1 3320244 3322406 R PFAM: UvrD/REP helicase; KEGG: bxe:Bxe_A1045 DNA helicase; UvrD/REP helicase complement(3320244..3322406) Burkholderia phytofirmans PsJN 6282686 YP_001896558.1 CDS Bphyt_2940 NC_010681.1 3322650 3322913 R KEGG: bxe:Bxe_A1044 hypothetical protein; hypothetical protein complement(3322650..3322913) Burkholderia phytofirmans PsJN 6282687 YP_001896559.1 CDS Bphyt_2941 NC_010681.1 3323016 3323462 R KEGG: bxe:Bxe_A1043 conserved hypothetical signal peptide protein; hypothetical protein complement(3323016..3323462) Burkholderia phytofirmans PsJN 6282688 YP_001896560.1 CDS Bphyt_2942 NC_010681.1 3323777 3323995 D KEGG: bxe:Bxe_A1042 hypothetical protein; hypothetical protein 3323777..3323995 Burkholderia phytofirmans PsJN 6282689 YP_001896561.1 CDS Bphyt_2943 NC_010681.1 3324276 3325688 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bxe:Bxe_A1041 multi antimicrobial extrusion protein MatE; MATE efflux family protein 3324276..3325688 Burkholderia phytofirmans PsJN 6282690 YP_001896562.1 CDS Bphyt_2944 NC_010681.1 3325945 3326115 R hypothetical protein complement(3325945..3326115) Burkholderia phytofirmans PsJN 6282691 YP_001896563.1 CDS Bphyt_2945 NC_010681.1 3326275 3327234 D PFAM: sodium symporter; KEGG: bxe:Bxe_A1040 Na+/bile acid symporter, BASS family; sodium symporter 3326275..3327234 Burkholderia phytofirmans PsJN 6282692 YP_001896564.1 CDS Bphyt_2946 NC_010681.1 3327500 3329173 D PFAM: phospholipase D/transphosphatidylase; KEGG: bxe:Bxe_A1039 phospholipase D; phospholipase D/transphosphatidylase 3327500..3329173 Burkholderia phytofirmans PsJN 6282036 YP_001896565.1 CDS fumC NC_010681.1 3329189 3330589 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 3329189..3330589 Burkholderia phytofirmans PsJN 6282037 YP_001896566.1 CDS Bphyt_2948 NC_010681.1 3330719 3331225 R PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A1037 long-chain acyl-CoA thioester hydrolase; thioesterase superfamily protein complement(3330719..3331225) Burkholderia phytofirmans PsJN 6282038 YP_001896567.1 CDS Bphyt_2949 NC_010681.1 3331371 3332684 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_A1036 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(3331371..3332684) Burkholderia phytofirmans PsJN 6282039 YP_001896568.1 CDS Bphyt_2950 NC_010681.1 3332684 3333940 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1035 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(3332684..3333940) Burkholderia phytofirmans PsJN 6282040 YP_001896569.1 CDS Bphyt_2951 NC_010681.1 3334058 3334201 R KEGG: bxe:Bxe_A1034 hypothetical protein; hypothetical protein complement(3334058..3334201) Burkholderia phytofirmans PsJN 6282041 YP_001896570.1 CDS Bphyt_2952 NC_010681.1 3334429 3335148 D PFAM: regulatory protein ArsR; KEGG: bxe:Bxe_A1033 ArsR family transcriptional regulator; ArsR family transcriptional regulator 3334429..3335148 Burkholderia phytofirmans PsJN 6282102 YP_001896571.1 CDS Bphyt_2953 NC_010681.1 3335330 3337945 D KEGG: bxe:Bxe_A1032 prolin-rich transmembrane protein; hypothetical protein 3335330..3337945 Burkholderia phytofirmans PsJN 6282103 YP_001896572.1 CDS thyA NC_010681.1 3338052 3339023 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(3338052..3339023) Burkholderia phytofirmans PsJN 6282104 YP_001896573.1 CDS Bphyt_2955 NC_010681.1 3339288 3340682 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: bxe:Bxe_A1029 sigma54 specific Fis family transcriptional regulator; Fis family transcriptional regulator complement(3339288..3340682) Burkholderia phytofirmans PsJN 6282105 YP_001896574.1 CDS Bphyt_2956 NC_010681.1 3341217 3341714 D KEGG: bxe:Bxe_A1028 hypothetical protein; hypothetical protein 3341217..3341714 Burkholderia phytofirmans PsJN 6282106 YP_001896575.1 CDS Bphyt_2957 NC_010681.1 3341803 3342330 D KEGG: bxe:Bxe_A1027 hypothetical protein; hypothetical protein 3341803..3342330 Burkholderia phytofirmans PsJN 6282107 YP_001896576.1 CDS Bphyt_2958 NC_010681.1 3342327 3342962 D KEGG: bxe:Bxe_A1026 conserved hypothetical signal peptide protein; hypothetical protein 3342327..3342962 Burkholderia phytofirmans PsJN 6282108 YP_001896577.1 CDS Bphyt_2959 NC_010681.1 3342989 3344380 D KEGG: bxe:Bxe_A1025 hypothetical protein; hypothetical protein 3342989..3344380 Burkholderia phytofirmans PsJN 6282290 YP_001896578.1 CDS Bphyt_2960 NC_010681.1 3344479 3345192 D PFAM: peptidase C39 bacteriocin processing; KEGG: bxe:Bxe_A1024 peptidase; peptidase C39 bacteriocin processing 3344479..3345192 Burkholderia phytofirmans PsJN 6282291 YP_001896579.1 CDS Bphyt_2961 NC_010681.1 3345200 3346027 D KEGG: bxe:Bxe_A1023 hypothetical protein; hypothetical protein 3345200..3346027 Burkholderia phytofirmans PsJN 6282292 YP_001896580.1 CDS Bphyt_2962 NC_010681.1 3346129 3347565 D KEGG: bxe:Bxe_A1022 hypothetical protein; hypothetical protein 3346129..3347565 Burkholderia phytofirmans PsJN 6282293 YP_001896581.1 CDS Bphyt_2963 NC_010681.1 3347590 3349158 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA; KEGG: bxe:Bxe_A1021 sigma54 specific Fis family transcriptional regulator; Fis family transcriptional regulator 3347590..3349158 Burkholderia phytofirmans PsJN 6282294 YP_001896582.1 CDS Bphyt_2964 NC_010681.1 3349394 3349894 D PFAM: dihydrofolate reductase region; KEGG: bxe:Bxe_A1020 dihydrofolate reductase; dihydrofolate reductase 3349394..3349894 Burkholderia phytofirmans PsJN 6282295 YP_001896583.1 CDS Bphyt_2965 NC_010681.1 3350049 3351419 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bxe:Bxe_A1019 microcin-processing peptidase; peptidase U62 modulator of DNA gyrase complement(3350049..3351419) Burkholderia phytofirmans PsJN 6282296 YP_001896584.1 CDS Bphyt_2966 NC_010681.1 3351726 3352340 D PFAM: protein of unknown function DUF615; KEGG: bxe:Bxe_A1018 hypothetical protein; hypothetical protein 3351726..3352340 Burkholderia phytofirmans PsJN 6282553 YP_001896585.1 CDS mogA NC_010681.1 3352321 3352965 D forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein 3352321..3352965 Burkholderia phytofirmans PsJN 6282554 YP_001896586.1 CDS Bphyt_2968 NC_010681.1 3352968 3353579 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(3352968..3353579) Burkholderia phytofirmans PsJN 6282555 YP_001896587.1 CDS Bphyt_2969 NC_010681.1 3353725 3354984 D PFAM: peptidase M48 Ste24p; KEGG: bxe:Bxe_A1015 peptidase M48 family; Ste24 endopeptidase 3353725..3354984 Burkholderia phytofirmans PsJN 6282556 YP_001896588.1 CDS Bphyt_2970 NC_010681.1 3354981 3355931 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 3354981..3355931 Burkholderia phytofirmans PsJN 6282557 YP_001896589.1 CDS Bphyt_2971 NC_010681.1 3355933 3356253 D KEGG: bxe:Bxe_A1013 hypothetical protein; hypothetical protein 3355933..3356253 Burkholderia phytofirmans PsJN 6282558 YP_001896590.1 CDS Bphyt_2972 NC_010681.1 3356455 3357393 R PFAM: cobalamin biosynthesis protein CbiB; KEGG: bxe:Bxe_A1011 adenosylcobinamide-phosphate synthase; CobD/CbiB family protein complement(3356455..3357393) Burkholderia phytofirmans PsJN 6280945 YP_001896591.1 CDS Bphyt_2973 NC_010681.1 3357507 3358235 R PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A1010 hypothetical protein; NUDIX hydrolase complement(3357507..3358235) Burkholderia phytofirmans PsJN 6280946 YP_001896592.1 CDS rplS NC_010681.1 3358329 3358718 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(3358329..3358718) Burkholderia phytofirmans PsJN 6280947 YP_001896593.1 CDS trmD NC_010681.1 3358864 3359631 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(3358864..3359631) Burkholderia phytofirmans PsJN 6280948 YP_001896594.1 CDS rimM NC_010681.1 3359657 3360403 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(3359657..3360403) Burkholderia phytofirmans PsJN 6280949 YP_001896595.1 CDS rpsP NC_010681.1 3360536 3360790 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(3360536..3360790) Burkholderia phytofirmans PsJN 6280950 YP_001896596.1 CDS Bphyt_2978 NC_010681.1 3360963 3362147 D KEGG: bxe:Bxe_A1005 membrane-bound dehydrogenase; membrane-bound dehydrogenase 3360963..3362147 Burkholderia phytofirmans PsJN 6280951 YP_001896597.1 CDS Bphyt_2979 NC_010681.1 3362457 3362924 D KEGG: bxe:Bxe_A1004 hypothetical protein; hypothetical protein 3362457..3362924 Burkholderia phytofirmans PsJN 6280745 YP_001896598.1 CDS Bphyt_2980 NC_010681.1 3362941 3364086 R PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bxe:Bxe_A1003 hypothetical protein; radical SAM protein complement(3362941..3364086) Burkholderia phytofirmans PsJN 6280746 YP_001896599.1 CDS Bphyt_2981 NC_010681.1 3364185 3364673 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_A1002 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(3364185..3364673) Burkholderia phytofirmans PsJN 6280747 YP_001896600.1 CDS Bphyt_2982 NC_010681.1 3364841 3366127 D catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 3364841..3366127 Burkholderia phytofirmans PsJN 6280748 YP_001896601.1 CDS Bphyt_2983 NC_010681.1 3366262 3368052 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A1000 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(3366262..3368052) Burkholderia phytofirmans PsJN 6280749 YP_001896602.1 CDS Bphyt_2984 NC_010681.1 3368156 3369091 R PFAM: electron transfer flavoprotein alpha/beta-subunit ; electron transfer flavoprotein subunit alpha; KEGG: bxe:Bxe_A0999 electron transfer flavoprotein, subunit alpha; electron transfer flavoprotein subunit alpha complement(3368156..3369091) Burkholderia phytofirmans PsJN 6280750 YP_001896603.1 CDS Bphyt_2985 NC_010681.1 3369106 3369855 R PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0998 electron transfer flavoprotein, beta-subunit; electron transfer flavoprotein subunits alpha/beta complement(3369106..3369855) Burkholderia phytofirmans PsJN 6280751 YP_001896604.1 CDS Bphyt_2986 NC_010681.1 3370094 3370891 R TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bxe:Bxe_A0997 ABC methionine transporter periplasmic ligand binding protein; lipoprotein complement(3370094..3370891) Burkholderia phytofirmans PsJN 6280785 YP_001896605.1 CDS Bphyt_2987 NC_010681.1 3370925 3371578 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0996 ABC methionine transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3370925..3371578) Burkholderia phytofirmans PsJN 6280786 YP_001896606.1 CDS Bphyt_2988 NC_010681.1 3371568 3372602 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A0995 ABC methionine transporter ATPase; ABC transporter complement(3371568..3372602) Burkholderia phytofirmans PsJN 6280787 YP_001896607.1 CDS Bphyt_2989 NC_010681.1 3372843 3373754 D PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: bxe:Bxe_A0994 hydrolase; alpha/beta fold family hydrolase 3372843..3373754 Burkholderia phytofirmans PsJN 6280788 YP_001896608.1 CDS Bphyt_2990 NC_010681.1 3373773 3374582 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(3373773..3374582) Burkholderia phytofirmans PsJN 6280789 YP_001896609.1 CDS Bphyt_2991 NC_010681.1 3374657 3375580 R PFAM: histone deacetylase; KEGG: bxe:Bxe_A0992 histone deacetylase-family protein; histone deacetylase complement(3374657..3375580) Burkholderia phytofirmans PsJN 6280790 YP_001896610.1 CDS Bphyt_2992 NC_010681.1 3375844 3377022 D TIGRFAM: lytic murein transglycosylase B; KEGG: bxe:Bxe_A0991 murein transglycosylase; lytic murein transglycosylase B 3375844..3377022 Burkholderia phytofirmans PsJN 6283541 YP_001896611.1 CDS cysM NC_010681.1 3377128 3378030 R catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B complement(3377128..3378030) Burkholderia phytofirmans PsJN 6283542 YP_001896612.1 CDS Bphyt_2994 NC_010681.1 3378305 3378670 R PFAM: hypothetical protein; KEGG: bxe:Bxe_A0989 hypothetical protein; hypothetical protein complement(3378305..3378670) Burkholderia phytofirmans PsJN 6283543 YP_001896613.1 CDS Bphyt_2995 NC_010681.1 3378748 3379740 R TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bxe:Bxe_A0988 ADP-glycero-mannoheptose epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase complement(3378748..3379740) Burkholderia phytofirmans PsJN 6283544 YP_001896614.1 CDS Bphyt_2996 NC_010681.1 3379886 3380809 R TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: bxe:Bxe_A0987 ADP-heptose synthase; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase complement(3379886..3380809) Burkholderia phytofirmans PsJN 6283545 YP_001896615.1 CDS Bphyt_2997 NC_010681.1 3380859 3382262 R TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; Ketopantoate reductase ApbA/PanE domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bxe:Bxe_A0986 UDP-glucose 6-dehydrogenase; nucleotide sugar dehydrogenase complement(3380859..3382262) Burkholderia phytofirmans PsJN 6283546 YP_001896616.1 CDS Bphyt_2998 NC_010681.1 3382413 3383588 R PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; KEGG: bxe:Bxe_A0985 hypothetical protein; hypothetical protein complement(3382413..3383588) Burkholderia phytofirmans PsJN 6283547 YP_001896617.1 CDS Bphyt_2999 NC_010681.1 3383656 3383949 R KEGG: bxe:Bxe_A0984 hypothetical protein; hypothetical protein complement(3383656..3383949) Burkholderia phytofirmans PsJN 6282797 YP_001896618.1 CDS ihfB NC_010681.1 3384421 3384744 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta complement(3384421..3384744) Burkholderia phytofirmans PsJN 6282798 YP_001896619.1 CDS rpsA NC_010681.1 3384766 3386499 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(3384766..3386499) Burkholderia phytofirmans PsJN 6282799 YP_001896620.1 CDS cmk NC_010681.1 3386665 3387351 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(3386665..3387351) Burkholderia phytofirmans PsJN 6282800 YP_001896621.1 CDS Bphyt_3003 NC_010681.1 3387387 3388691 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(3387387..3388691) Burkholderia phytofirmans PsJN 6282801 YP_001896622.1 CDS Bphyt_3004 NC_010681.1 3388711 3389652 R PFAM: prephenate dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_A0979 bifunctional - 3-phosphoshikimate 1-carboxyvinyl transferase/prephenate dehydrogenase; prephenate dehydrogenase complement(3388711..3389652) Burkholderia phytofirmans PsJN 6282802 YP_001896623.1 CDS Bphyt_3005 NC_010681.1 3389705 3390817 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(3389705..3390817) Burkholderia phytofirmans PsJN 6284045 YP_001896624.1 CDS Bphyt_3006 NC_010681.1 3390896 3391978 R TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; chorismate mutase; amino acid-binding ACT domain protein; KEGG: bxe:Bxe_A0977 bifunctional, chorismate mutase/prephenate dehydratase; chorismate mutase complement(3390896..3391978) Burkholderia phytofirmans PsJN 6284046 YP_001896625.1 CDS Bphyt_3007 NC_010681.1 3392048 3393130 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(3392048..3393130) Burkholderia phytofirmans PsJN 6284047 YP_001896626.1 CDS Bphyt_3008 NC_010681.1 3393428 3394030 R KEGG: bxe:Bxe_A0975 hypothetical protein; hypothetical protein complement(3393428..3394030) Burkholderia phytofirmans PsJN 6284048 YP_001896627.1 CDS Bphyt_3009 NC_010681.1 3394154 3396790 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(3394154..3396790) Burkholderia phytofirmans PsJN 6284049 YP_001896628.1 CDS Bphyt_3010 NC_010681.1 3397277 3397924 D PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_A0973 outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein 3397277..3397924 Burkholderia phytofirmans PsJN 6284050 YP_001896629.1 CDS Bphyt_3011 NC_010681.1 3398117 3398815 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3398117..3398815 Burkholderia phytofirmans PsJN 6284051 YP_001896630.1 CDS Bphyt_3012 NC_010681.1 3398847 3399560 D TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: bxe:Bxe_A0971 2-phosphoglycolate phosphatase; phosphoglycolate phosphatase 3398847..3399560 Burkholderia phytofirmans PsJN 6281024 YP_001896631.1 CDS Bphyt_3014 NC_010681.1 3401270 3401533 D KEGG: rso:RSc2283 hypothetical protein; hypothetical protein 3401270..3401533 Burkholderia phytofirmans PsJN 6281026 YP_001896632.1 CDS Bphyt_3015 NC_010681.1 3401530 3402084 D KEGG: bam:Bamb_1060 hypothetical protein; hypothetical protein 3401530..3402084 Burkholderia phytofirmans PsJN 6281027 YP_001896633.1 CDS Bphyt_3016 NC_010681.1 3402088 3402705 D KEGG: bur:Bcep18194_B2977 hypothetical protein; hypothetical protein 3402088..3402705 Burkholderia phytofirmans PsJN 6281028 YP_001896634.1 CDS Bphyt_3018 NC_010681.1 3404016 3404375 D PFAM: Secreted repeat of unknown function; KEGG: bxe:Bxe_A0969 lipoprotein; hypothetical protein 3404016..3404375 Burkholderia phytofirmans PsJN 6281030 YP_001896635.1 CDS Bphyt_3019 NC_010681.1 3404483 3404749 R KEGG: bxe:Bxe_A0968 hypothetical protein; hypothetical protein complement(3404483..3404749) Burkholderia phytofirmans PsJN 6282297 YP_001896636.1 CDS Bphyt_3020 NC_010681.1 3404858 3405937 R PFAM: regulatory protein LysR; KEGG: bxe:Bxe_A0967 transcriptional regulator of molybdate metabolism, LysR family; transcriptional regulator of molybdate metabolism, LysR family complement(3404858..3405937) Burkholderia phytofirmans PsJN 6282298 YP_001896637.1 CDS Bphyt_3021 NC_010681.1 3406072 3406557 D KEGG: bxe:Bxe_A0966 NAD-dependent formate dehydrogenase, subunit gamma; NAD-dependent formate dehydrogenase subunit gamma 3406072..3406557 Burkholderia phytofirmans PsJN 6282299 YP_001896638.1 CDS Bphyt_3022 NC_010681.1 3406554 3408116 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: bxe:Bxe_A0965 NAD-dependent formate dehydrogenase, beta subunit; NADH dehydrogenase (quinone) 3406554..3408116 Burkholderia phytofirmans PsJN 6282300 YP_001896639.1 CDS Bphyt_3023 NC_010681.1 3408131 3411079 D TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bxe:Bxe_A0964 NAD-dependent formate dehydrogenase, subunit alpha; formate dehydrogenase subunit alpha 3408131..3411079 Burkholderia phytofirmans PsJN 6282301 YP_001896640.1 CDS Bphyt_3024 NC_010681.1 3411088 3411339 D KEGG: bxe:Bxe_A0963 NAD-dependent formate dehydrogenase, subunit delta; NAD-dependent formate dehydrogenase subunit delta 3411088..3411339 Burkholderia phytofirmans PsJN 6282302 YP_001896641.1 CDS Bphyt_3025 NC_010681.1 3411544 3413268 R PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_A0962 monooxygenase, FAD-binding; FAD-binding monooxygenase complement(3411544..3413268) Burkholderia phytofirmans PsJN 6282082 YP_001896642.1 CDS Bphyt_3026 NC_010681.1 3413416 3414516 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bxe:Bxe_A0961 cation (heavy metal) efflux pump, CDF family; cation diffusion facilitator family transporter complement(3413416..3414516) Burkholderia phytofirmans PsJN 6282083 YP_001896643.1 CDS Bphyt_3027 NC_010681.1 3414513 3414905 R PFAM: regulatory protein ArsR; KEGG: bxe:Bxe_A0960 ArsR family transcriptional regulator; ArsR family transcriptional regulator complement(3414513..3414905) Burkholderia phytofirmans PsJN 6282084 YP_001896644.1 CDS Bphyt_3028 NC_010681.1 3414995 3416857 D PFAM: hypothetical protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_A0959 hypothetical protein; hypothetical protein 3414995..3416857 Burkholderia phytofirmans PsJN 6282085 YP_001896645.1 CDS Bphyt_3029 NC_010681.1 3416971 3418272 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0958 major facilitator superfamily (MFS) citrate/H+ symporter; general substrate transporter complement(3416971..3418272) Burkholderia phytofirmans PsJN 6282086 YP_001896646.1 CDS Bphyt_3030 NC_010681.1 3418575 3419099 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A0957 acetyltransferase; N-acetyltransferase GCN5 3418575..3419099 Burkholderia phytofirmans PsJN 6282087 YP_001896647.1 CDS Bphyt_3031 NC_010681.1 3419404 3420522 D KEGG: bxe:Bxe_A0956 hypothetical protein; hypothetical protein 3419404..3420522 Burkholderia phytofirmans PsJN 6282088 YP_001896648.1 CDS Bphyt_3032 NC_010681.1 3420615 3421346 R KEGG: bxe:Bxe_A0955 exported lipoprotein; exported lipoprotein complement(3420615..3421346) Burkholderia phytofirmans PsJN 6281608 YP_001896649.1 CDS Bphyt_3033 NC_010681.1 3421870 3423351 R PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: bte:BTH_I1617 glutamine amidotransferase, class I; peptidase C26 complement(3421870..3423351) Burkholderia phytofirmans PsJN 6281609 YP_001896650.1 CDS Bphyt_3034 NC_010681.1 3423502 3425259 R PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_A0953 Na+/H+ antiporter, CPA2 family; sodium/hydrogen exchanger complement(3423502..3425259) Burkholderia phytofirmans PsJN 6281610 YP_001896651.1 CDS Bphyt_3035 NC_010681.1 3425467 3426156 D KEGG: bcm:Bcenmc03_5495 hypothetical protein; hypothetical protein 3425467..3426156 Burkholderia phytofirmans PsJN 6281611 YP_001896652.1 CDS Bphyt_3036 NC_010681.1 3426164 3427513 D PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_A0742 MFS transporter ACS family; major facilitator superfamily protein 3426164..3427513 Burkholderia phytofirmans PsJN 6281612 YP_001896653.1 CDS Bphyt_3037 NC_010681.1 3427523 3427663 D hypothetical protein 3427523..3427663 Burkholderia phytofirmans PsJN 6281613 YP_001896654.1 CDS Bphyt_3038 NC_010681.1 3427660 3428340 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bam:Bamb_0887 GntR family transcriptional regulator; GntR family transcriptional regulator 3427660..3428340 Burkholderia phytofirmans PsJN 6281614 YP_001896655.1 CDS Bphyt_3039 NC_010681.1 3428442 3429821 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3428442..3429821 Burkholderia phytofirmans PsJN 6283239 YP_001896656.1 CDS Bphyt_3040 NC_010681.1 3429943 3430452 D disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 3429943..3430452 Burkholderia phytofirmans PsJN 6283240 YP_001896657.1 CDS Bphyt_3041 NC_010681.1 3430835 3432382 D TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_A0950 xanthine dehydrogenase, subunit A; xanthine dehydrogenase small subunit 3430835..3432382 Burkholderia phytofirmans PsJN 6283241 YP_001896658.1 CDS Bphyt_3042 NC_010681.1 3432382 3434784 D KEGG: bxe:Bxe_A0949 xanthine dehydrogenase, subunit B; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; xanthine dehydrogenase molybdopterin binding subunit 3432382..3434784 Burkholderia phytofirmans PsJN 6283242 YP_001896659.1 CDS Bphyt_3043 NC_010681.1 3434881 3435897 D TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: bxe:Bxe_A0948 xanthine dehydrogenase maturation factor, XdhC; xanthine dehydrogenase accessory protein XdhC 3434881..3435897 Burkholderia phytofirmans PsJN 6283243 YP_001896660.1 CDS Bphyt_3044 NC_010681.1 3435980 3437032 D catalyzes the formation of inosine from adenosine; adenosine deaminase 3435980..3437032 Burkholderia phytofirmans PsJN 6283244 YP_001896661.1 CDS Bphyt_3045 NC_010681.1 3437138 3438511 D Catalyzes the deamination of guanine; guanine deaminase 3437138..3438511 Burkholderia phytofirmans PsJN 6281989 YP_001896662.1 CDS Bphyt_3046 NC_010681.1 3438595 3439839 R PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: bxe:Bxe_A0945 oxidoreductase; tryptophan halogenase complement(3438595..3439839) Burkholderia phytofirmans PsJN 6281990 YP_001896663.1 CDS Bphyt_3047 NC_010681.1 3439976 3440710 D PFAM: methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: bxe:Bxe_A0944 hypothetical protein; type 11 methyltransferase 3439976..3440710 Burkholderia phytofirmans PsJN 6281991 YP_001896664.1 CDS Bphyt_3048 NC_010681.1 3440843 3441286 R KEGG: bxe:Bxe_A0943 excinuclease, ATPase subunit; excinuclease ATPase subunit complement(3440843..3441286) Burkholderia phytofirmans PsJN 6281992 YP_001896665.1 CDS Bphyt_3049 NC_010681.1 3441347 3441769 R KEGG: bxe:Bxe_A0942 conserved hypothetical signal peptide protein; hypothetical protein complement(3441347..3441769) Burkholderia phytofirmans PsJN 6281993 YP_001896666.1 CDS Bphyt_3050 NC_010681.1 3441809 3443050 R PFAM: beta-ketoacyl synthase; KEGG: bxe:Bxe_A0941 3-oxoacyl-(acyl-carrier-protein) synthase I; beta-ketoacyl synthase complement(3441809..3443050) Burkholderia phytofirmans PsJN 6281994 YP_001896667.1 CDS Bphyt_3051 NC_010681.1 3443047 3444273 R FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(3443047..3444273) Burkholderia phytofirmans PsJN 6281995 YP_001896668.1 CDS Bphyt_3052 NC_010681.1 3444273 3444998 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A0939 short chain dehydrogenase; short chain dehydrogenase complement(3444273..3444998) Burkholderia phytofirmans PsJN 6283722 YP_001896669.1 CDS Bphyt_3053 NC_010681.1 3444995 3445504 R PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: bxe:Bxe_A0938 hypothetical protein; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ complement(3444995..3445504) Burkholderia phytofirmans PsJN 6283723 YP_001896670.1 CDS Bphyt_3054 NC_010681.1 3445513 3446694 R FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(3445513..3446694) Burkholderia phytofirmans PsJN 6283724 YP_001896671.1 CDS Bphyt_3055 NC_010681.1 3446691 3449102 R KEGG: bxe:Bxe_A0936 drug efflux pump, RND superfamily; RND superfamily drug efflux pump complement(3446691..3449102) Burkholderia phytofirmans PsJN 6283725 YP_001896672.1 CDS Bphyt_3056 NC_010681.1 3449102 3449788 R KEGG: bxe:Bxe_A0935 conserved hypothetical signal peptide protein; hypothetical protein complement(3449102..3449788) Burkholderia phytofirmans PsJN 6283726 YP_001896673.1 CDS Bphyt_3057 NC_010681.1 3449776 3450207 R PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A0934 hypothetical protein; thioesterase superfamily protein complement(3449776..3450207) Burkholderia phytofirmans PsJN 6283727 YP_001896674.1 CDS Bphyt_3058 NC_010681.1 3450204 3451799 R PFAM: phenylalanine/histidine ammonia-lyase; KEGG: bxe:Bxe_A0933 histidine ammonia-lyase; histidine ammonia-lyase complement(3450204..3451799) Burkholderia phytofirmans PsJN 6283728 YP_001896675.1 CDS Bphyt_3059 NC_010681.1 3451786 3453513 R PFAM: glycosyl transferase family 2; lipid A biosynthesis acyltransferase; KEGG: bxe:Bxe_A0932 hypothetical protein; family 2 glycosyl transferase complement(3451786..3453513) Burkholderia phytofirmans PsJN 6281807 YP_001896676.1 CDS Bphyt_3060 NC_010681.1 3453510 3455216 R PFAM: AMP-dependent synthetase and ligase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: bxe:Bxe_A0931 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(3453510..3455216) Burkholderia phytofirmans PsJN 6281808 YP_001896677.1 CDS Bphyt_3061 NC_010681.1 3455213 3455875 R KEGG: bxe:Bxe_A0930 hypothetical protein; hypothetical protein complement(3455213..3455875) Burkholderia phytofirmans PsJN 6281809 YP_001896678.1 CDS Bphyt_3062 NC_010681.1 3455875 3456126 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(3455875..3456126) Burkholderia phytofirmans PsJN 6281810 YP_001896679.1 CDS Bphyt_3063 NC_010681.1 3456130 3456429 R KEGG: bxe:Bxe_A0928 acyl-carrier protein; acyl-carrier protein complement(3456130..3456429) Burkholderia phytofirmans PsJN 6281811 YP_001896680.1 CDS Bphyt_3064 NC_010681.1 3456404 3457198 R PFAM: phospholipid/glycerol acyltransferase; KEGG: bxe:Bxe_A0927 acyltransferase; phospholipid/glycerol acyltransferase complement(3456404..3457198) Burkholderia phytofirmans PsJN 6281812 YP_001896681.1 CDS Bphyt_3065 NC_010681.1 3457182 3457964 R KEGG: bxe:Bxe_A0926 hypothetical protein; hypothetical protein complement(3457182..3457964) Burkholderia phytofirmans PsJN 6280798 YP_001896682.1 CDS Bphyt_3066 NC_010681.1 3458393 3458545 R hypothetical protein complement(3458393..3458545) Burkholderia phytofirmans PsJN 6280799 YP_001896683.1 CDS Bphyt_3067 NC_010681.1 3458650 3459354 R KEGG: bxe:Bxe_A0924 transmembrane lipoprotein; transmembrane lipoprotein complement(3458650..3459354) Burkholderia phytofirmans PsJN 6280800 YP_001896684.1 CDS pepN NC_010681.1 3459582 3462278 D TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: bxe:Bxe_A0923 peptidase M1, alanyl aminopeptidase; aminopeptidase N 3459582..3462278 Burkholderia phytofirmans PsJN 6280801 YP_001896685.1 CDS Bphyt_3069 NC_010681.1 3462483 3462764 D PFAM: plasmid maintenance system killer; KEGG: rru:Rru_A2020 plasmid maintenance system killer; plasmid maintenance system killer protein 3462483..3462764 Burkholderia phytofirmans PsJN 6280802 YP_001896686.1 CDS Bphyt_3070 NC_010681.1 3462781 3463236 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: bxe:Bxe_A0921 hypothetical protein; plasmid maintenance system antidote protein 3462781..3463236 Burkholderia phytofirmans PsJN 6280803 YP_001896687.1 CDS Bphyt_3071 NC_010681.1 3463358 3464374 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 3463358..3464374 Burkholderia phytofirmans PsJN 6280804 YP_001896688.1 CDS Bphyt_3072 NC_010681.1 3464607 3464813 R KEGG: bxe:Bxe_A0919 hypothetical protein; hypothetical protein complement(3464607..3464813) Burkholderia phytofirmans PsJN 6280740 YP_001896689.1 CDS Bphyt_3073 NC_010681.1 3464908 3467760 D TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter related; KEGG: reu:Reut_C5906 excinuclease ABC subunit A; excinuclease ABC subunit A 3464908..3467760 Burkholderia phytofirmans PsJN 6280741 YP_001896690.1 CDS Bphyt_3074 NC_010681.1 3467867 3469002 R PFAM: transposase IS3/IS911 family protein; KEGG: bps:BPSS2148a transposase; transposase IS3/IS911 family protein complement(join(3467867..3468748,3468748..3469002)) Burkholderia phytofirmans PsJN 6280742 YP_001896691.1 CDS Bphyt_3075 NC_010681.1 3469593 3469742 D KEGG: bpd:BURPS668_2938 hypothetical protein; hypothetical protein 3469593..3469742 Burkholderia phytofirmans PsJN 6280743 YP_001896692.1 CDS Bphyt_3076 NC_010681.1 3470015 3470611 D catalyzes the interconversion of chorismate to prephenate; chorismate mutase 3470015..3470611 Burkholderia phytofirmans PsJN 6280744 YP_001896693.1 CDS Bphyt_3077 NC_010681.1 3470741 3471892 R KEGG: bxe:Bxe_A0914 DNA polymerase III epsilon subunit; TIGRFAM: DNA polymerase III subunit epsilon; PFAM: excinuclease ABC C subunit domain protein; exonuclease RNase T and DNA polymerase III; SMART: exonuclease; DNA polymerase III subunit epsilon complement(3470741..3471892) Burkholderia phytofirmans PsJN 6283820 YP_001896694.1 CDS Bphyt_3078 NC_010681.1 3472245 3472448 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_A0913 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(3472245..3472448) Burkholderia phytofirmans PsJN 6283821 YP_001896695.1 CDS Bphyt_3079 NC_010681.1 3472864 3473112 D KEGG: bxe:Bxe_A0912 hypothetical protein; hypothetical protein 3472864..3473112 Burkholderia phytofirmans PsJN 6283822 YP_001896696.1 CDS Bphyt_3080 NC_010681.1 3473643 3474788 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A0910 outer membrane porin, OmpC family; porin 3473643..3474788 Burkholderia phytofirmans PsJN 6283823 YP_001896697.1 CDS greB NC_010681.1 3474907 3475476 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(3474907..3475476) Burkholderia phytofirmans PsJN 6283824 YP_001896698.1 CDS Bphyt_3082 NC_010681.1 3475943 3476452 R KEGG: bxe:Bxe_A0908 hypothetical protein; hypothetical protein complement(3475943..3476452) Burkholderia phytofirmans PsJN 6281314 YP_001896699.1 CDS Bphyt_3083 NC_010681.1 3476561 3478918 R KEGG: bxe:Bxe_A0907 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA complement(3476561..3478918) Burkholderia phytofirmans PsJN 6281315 YP_001896700.1 CDS Bphyt_3084 NC_010681.1 3479069 3479272 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and subunit alphas; DNA-directed RNA polymerase subunit omega complement(3479069..3479272) Burkholderia phytofirmans PsJN 6281316 YP_001896701.1 CDS gmk NC_010681.1 3479333 3480013 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(3479333..3480013) Burkholderia phytofirmans PsJN 6281317 YP_001896702.1 CDS Bphyt_3086 NC_010681.1 3480032 3480955 R PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: bxe:Bxe_A0904 hypothetical protein; hypothetical protein complement(3480032..3480955) Burkholderia phytofirmans PsJN 6282867 YP_001896703.1 CDS rph NC_010681.1 3481166 3481906 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3481166..3481906 Burkholderia phytofirmans PsJN 6282868 YP_001896704.1 CDS Bphyt_3088 NC_010681.1 3481899 3482546 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 3481899..3482546 Burkholderia phytofirmans PsJN 6282869 YP_001896705.1 CDS Bphyt_3089 NC_010681.1 3482543 3483772 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3482543..3483772 Burkholderia phytofirmans PsJN 6282870 YP_001896706.1 CDS Bphyt_3090 NC_010681.1 3484009 3484155 R hypothetical protein complement(3484009..3484155) Burkholderia phytofirmans PsJN 6282872 YP_001896707.1 CDS Bphyt_3091 NC_010681.1 3485216 3485362 D hypothetical protein 3485216..3485362 Burkholderia phytofirmans PsJN 6284752 YP_001896708.1 CDS Bphyt_3092 NC_010681.1 3485365 3486348 D KEGG: pnu:Pnuc_1137 hypothetical protein; hypothetical protein 3485365..3486348 Burkholderia phytofirmans PsJN 6284753 YP_001896709.1 CDS Bphyt_3093 NC_010681.1 3486579 3487169 D KEGG: mfa:Mfla_0418 hypothetical protein; hypothetical protein 3486579..3487169 Burkholderia phytofirmans PsJN 6284754 YP_001896710.1 CDS Bphyt_3094 NC_010681.1 3487362 3487766 R PFAM: endoribonuclease L-PSP; KEGG: bxe:Bxe_A0900 hypothetical protein; endoribonuclease L-PSP complement(3487362..3487766) Burkholderia phytofirmans PsJN 6284755 YP_001896711.1 CDS Bphyt_3095 NC_010681.1 3487944 3488174 R KEGG: bxe:Bxe_A0899 hypothetical protein; hypothetical protein complement(3487944..3488174) Burkholderia phytofirmans PsJN 6284756 YP_001896712.1 CDS Bphyt_3096 NC_010681.1 3488294 3489514 R TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0898 major facilitator superfamily (MFS) multidrug efflux pump, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter complement(3488294..3489514) Burkholderia phytofirmans PsJN 6284757 YP_001896713.1 CDS Bphyt_3097 NC_010681.1 3489773 3490258 D KEGG: bxe:Bxe_A0897 hypothetical protein; hypothetical protein 3489773..3490258 Burkholderia phytofirmans PsJN 6283038 YP_001896714.1 CDS Bphyt_3098 NC_010681.1 3490398 3491681 D catalyzes the formation of 5-aminovulinate from (S)-4-amino-5-oxopentanoate; glutamate-1-semialdehyde 2,1-aminomutase 3490398..3491681 Burkholderia phytofirmans PsJN 6283039 YP_001896715.1 CDS Bphyt_3099 NC_010681.1 3491753 3492904 D TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: bxe:Bxe_A0895 riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD 3491753..3492904 Burkholderia phytofirmans PsJN 6283040 YP_001896716.1 CDS Bphyt_3100 NC_010681.1 3492920 3493534 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3492920..3493534 Burkholderia phytofirmans PsJN 6283041 YP_001896717.2 CDS Bphyt_3101 NC_010681.1 3493736 3494872 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 3493736..3494872 Burkholderia phytofirmans PsJN 6283042 YP_001896718.1 CDS ribH NC_010681.1 3494922 3495428 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; subunit beta of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3494922..3495428 Burkholderia phytofirmans PsJN 6283043 YP_001896719.1 CDS nusB NC_010681.1 3495425 3495859 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3495425..3495859 Burkholderia phytofirmans PsJN 6283044 YP_001896720.1 CDS Bphyt_3104 NC_010681.1 3496009 3497205 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; KEGG: bxe:Bxe_A0890 aminotransferase; aminotransferase 3496009..3497205 Burkholderia phytofirmans PsJN 6284573 YP_001896721.1 CDS Bphyt_3105 NC_010681.1 3497312 3498493 R PFAM: lytic transglycosylase catalytic; KEGG: bxe:Bxe_A0889 transglycosylase SLT domain lipoprotein; lytic transglycosylase complement(3497312..3498493) Burkholderia phytofirmans PsJN 6284574 YP_001896722.1 CDS Bphyt_3106 NC_010681.1 3499101 3500669 D TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein; KEGG: bxe:Bxe_A0888 carboxylyase-related protein; UbiD family decarboxylase 3499101..3500669 Burkholderia phytofirmans PsJN 6284575 YP_001896723.1 CDS Bphyt_3107 NC_010681.1 3500723 3501400 D PFAM: lysine exporter (LYSE/YGGA); KEGG: bxe:Bxe_A0887 homoserine/homoserine lactone/threonine efflux pump, RhtB family; lysine exporter protein LysE/YggA 3500723..3501400 Burkholderia phytofirmans PsJN 6284576 YP_001896724.1 CDS Bphyt_3108 NC_010681.1 3501483 3502448 R PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bxe:Bxe_A0886 serine/threonine dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta complement(3501483..3502448) Burkholderia phytofirmans PsJN 6284577 YP_001896725.1 CDS Bphyt_3109 NC_010681.1 3502698 3502997 R KEGG: bxe:Bxe_A0885 hypothetical protein; hypothetical protein complement(3502698..3502997) Burkholderia phytofirmans PsJN 6284578 YP_001896726.1 CDS Bphyt_3110 NC_010681.1 3503370 3503531 R KEGG: bxe:Bxe_A0883 hypothetical protein; hypothetical protein complement(3503370..3503531) Burkholderia phytofirmans PsJN 6281938 YP_001896727.1 CDS Bphyt_3111 NC_010681.1 3503769 3504707 D PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: bxe:Bxe_A0882 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 3503769..3504707 Burkholderia phytofirmans PsJN 6281939 YP_001896728.1 CDS Bphyt_3112 NC_010681.1 3504785 3505105 D PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bxe:Bxe_A0881 hypothetical protein; ethyl tert-butyl ether degradation EthD 3504785..3505105 Burkholderia phytofirmans PsJN 6281940 YP_001896729.1 CDS Bphyt_3113 NC_010681.1 3505332 3505895 D PFAM: protein of unknown function YGGT; KEGG: bxe:Bxe_A0880 hypothetical protein; hypothetical protein 3505332..3505895 Burkholderia phytofirmans PsJN 6281941 YP_001896730.1 CDS Bphyt_3114 NC_010681.1 3505965 3506861 R KEGG: bxe:Bxe_A0879 hypothetical protein; hypothetical protein complement(3505965..3506861) Burkholderia phytofirmans PsJN 6281942 YP_001896731.1 CDS Bphyt_3115 NC_010681.1 3507861 3508922 D PFAM: cobyrinic acid ac-diamide synthase; KEGG: pap:PSPA7_5376 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 3507861..3508922 Burkholderia phytofirmans PsJN 6281943 YP_001896732.1 CDS Bphyt_3116 NC_010681.1 3508929 3509600 D KEGG: hha:Hhal_1149 hypothetical protein; hypothetical protein 3508929..3509600 Burkholderia phytofirmans PsJN 6281944 YP_001896733.1 CDS Bphyt_3117 NC_010681.1 3509746 3510048 R KEGG: bpd:BURPS668_3043 hypothetical protein; hypothetical protein complement(3509746..3510048) Burkholderia phytofirmans PsJN 6282485 YP_001896734.1 CDS trmB NC_010681.1 3511082 3511864 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3511082..3511864 Burkholderia phytofirmans PsJN 6282487 YP_001896735.1 CDS Bphyt_3119 NC_010681.1 3511946 3512782 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(3511946..3512782) Burkholderia phytofirmans PsJN 6282488 YP_001896736.1 CDS Bphyt_3120 NC_010681.1 3512864 3513457 R KEGG: bxe:Bxe_A0857 hypothetical protein; hypothetical protein complement(3512864..3513457) Burkholderia phytofirmans PsJN 6282489 YP_001896737.1 CDS Bphyt_3121 NC_010681.1 3513572 3513901 R PFAM: protein of unknown function UPF0153; KEGG: bxe:Bxe_A0856 hypothetical protein; hypothetical protein complement(3513572..3513901) Burkholderia phytofirmans PsJN 6282490 YP_001896738.1 CDS Bphyt_3122 NC_010681.1 3514127 3515512 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3514127..3515512 Burkholderia phytofirmans PsJN 6281158 YP_001896739.1 CDS Bphyt_3123 NC_010681.1 3515854 3517239 R PFAM: amino acid permease-associated region; KEGG: bxe:Bxe_A0842 aromatic amino acid/H+ symporter; amino acid permease-associated protein complement(3515854..3517239) Burkholderia phytofirmans PsJN 6281160 YP_001896740.1 CDS Bphyt_3124 NC_010681.1 3517454 3518452 D KEGG: bxe:Bxe_A0841 hypothetical protein; hypothetical protein 3517454..3518452 Burkholderia phytofirmans PsJN 6281161 YP_001896741.1 CDS Bphyt_3125 NC_010681.1 3518512 3520236 R catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase complement(3518512..3520236) Burkholderia phytofirmans PsJN 6281162 YP_001896742.1 CDS Bphyt_3126 NC_010681.1 3520373 3521206 R PFAM: peptidase M55 D-aminopeptidase; KEGG: bxe:Bxe_A0840 peptidase M55, D-aminopeptidase; peptidase M55 D-aminopeptidase complement(3520373..3521206) Burkholderia phytofirmans PsJN 6284435 YP_001896743.1 CDS Bphyt_3127 NC_010681.1 3521206 3522306 R PFAM: peptidase S58 DmpA; KEGG: bxe:Bxe_A0839 aminopeptidase DmpA; peptidase S58 DmpA complement(3521206..3522306) Burkholderia phytofirmans PsJN 6284436 YP_001896744.1 CDS Bphyt_3128 NC_010681.1 3522303 3523208 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0838 ABC peptide transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3522303..3523208) Burkholderia phytofirmans PsJN 6284437 YP_001896745.1 CDS Bphyt_3129 NC_010681.1 3523216 3524136 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0837 ABC peptide transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3523216..3524136) Burkholderia phytofirmans PsJN 6284438 YP_001896746.1 CDS Bphyt_3130 NC_010681.1 3524260 3525822 R PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A0836 ABC peptide transporter periplasmic ligand binding protein; family 5 extracellular solute-binding protein complement(3524260..3525822) Burkholderia phytofirmans PsJN 6284439 YP_001896747.1 CDS Bphyt_3131 NC_010681.1 3525906 3527828 R PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: bxe:Bxe_A0835 ABC oligopeptide/dipeptide transporter duplicated ATPases; peptide ABC transporter ATPase complement(3525906..3527828) Burkholderia phytofirmans PsJN 6284440 YP_001896748.1 CDS Bphyt_3132 NC_010681.1 3527902 3528894 R PFAM: peptidase T2 asparaginase 2; KEGG: bxe:Bxe_A0834 peptidase T2, asparaginase 2; asparaginase complement(3527902..3528894) Burkholderia phytofirmans PsJN 6284441 YP_001896749.1 CDS Bphyt_3133 NC_010681.1 3528891 3529874 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_A0833 RpiR family transcriptional regulator; RpiR family transcriptional regulator complement(3528891..3529874) Burkholderia phytofirmans PsJN 6284454 YP_001896750.1 CDS Bphyt_3134 NC_010681.1 3530043 3531296 R PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bpm:BURPS1710b_A2600 hypothetical protein; major facilitator superfamily protein complement(3530043..3531296) Burkholderia phytofirmans PsJN 6284455 YP_001896751.1 CDS Bphyt_3135 NC_010681.1 3531392 3532102 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bxe:Bxe_A0832 pseudouridine synthase, Rsu; pseudouridine synthase 3531392..3532102 Burkholderia phytofirmans PsJN 6284456 YP_001896752.1 CDS Bphyt_3136 NC_010681.1 3532270 3532458 D KEGG: bxe:Bxe_A0831 hypothetical protein; hypothetical protein 3532270..3532458 Burkholderia phytofirmans PsJN 6284457 YP_001896753.1 CDS Bphyt_3137 NC_010681.1 3532615 3533640 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_A0830 hypothetical protein; NAD-dependent epimerase/dehydratase complement(3532615..3533640) Burkholderia phytofirmans PsJN 6284458 YP_001896754.1 CDS Bphyt_3138 NC_010681.1 3533750 3534781 D catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 3533750..3534781 Burkholderia phytofirmans PsJN 6284459 YP_001896755.1 CDS argD NC_010681.1 3535142 3536326 D DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 3535142..3536326 Burkholderia phytofirmans PsJN 6284460 YP_001896756.1 CDS Bphyt_3140 NC_010681.1 3536345 3536815 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A0826 acetyltransferase; acetyltransferase 3536345..3536815 Burkholderia phytofirmans PsJN 6282917 YP_001896757.1 CDS Bphyt_3141 NC_010681.1 3536898 3537614 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A0825 ABC branched chain amino acid family transporter ATPase subunit; branched-chain amino acid ABC transporter ATPase complement(3536898..3537614) Burkholderia phytofirmans PsJN 6282918 YP_001896758.1 CDS Bphyt_3142 NC_010681.1 3537614 3538387 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A0824 ABC branched chain amino acid family transporter ATPase subunit; branched-chain amino acid ABC transporter ATPase complement(3537614..3538387) Burkholderia phytofirmans PsJN 6282919 YP_001896759.1 CDS Bphyt_3143 NC_010681.1 3538408 3539577 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0823 ABC branched chain amino acid family transporter inner membrane subunit; branched-chain amino acid ABC transporter inner membrane protein complement(3538408..3539577) Burkholderia phytofirmans PsJN 6282920 YP_001896760.1 CDS Bphyt_3144 NC_010681.1 3539596 3540546 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0822 ABC branched chain amino acid family transporter inner membrane subunit; branched-chain amino acid ABC transporter inner membrane protein complement(3539596..3540546) Burkholderia phytofirmans PsJN 6282921 YP_001896761.1 CDS Bphyt_3145 NC_010681.1 3540777 3541976 R PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A0821 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched-chain amino acid ABC transporter inner membrane protein complement(3540777..3541976) Burkholderia phytofirmans PsJN 6282922 YP_001896762.1 CDS ispH NC_010681.1 3542517 3543476 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(3542517..3543476) Burkholderia phytofirmans PsJN 6281527 YP_001896763.1 CDS Bphyt_3147 NC_010681.1 3543479 3543934 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bxe:Bxe_A0819 FkpB-type peptidyl-prolyl cis-transisomerase; FKBP-type peptidylprolyl isomerase complement(3543479..3543934) Burkholderia phytofirmans PsJN 6281528 YP_001896764.1 CDS radC NC_010681.1 3544100 3544879 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 3544100..3544879 Burkholderia phytofirmans PsJN 6281529 YP_001896765.1 CDS rpmB NC_010681.1 3545119 3545352 D required for 70S ribosome assembly; 50S ribosomal protein L28 3545119..3545352 Burkholderia phytofirmans PsJN 6281530 YP_001896766.1 CDS rpmG NC_010681.1 3545363 3545530 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 3545363..3545530 Burkholderia phytofirmans PsJN 6281531 YP_001896767.1 CDS Bphyt_3151 NC_010681.1 3545780 3547378 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 3545780..3547378 Burkholderia phytofirmans PsJN 6281532 YP_001896768.1 CDS Bphyt_3152 NC_010681.1 3547470 3548369 R catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase complement(3547470..3548369) Burkholderia phytofirmans PsJN 6281533 YP_001896769.1 CDS Bphyt_3153 NC_010681.1 3548369 3549508 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(3548369..3549508) Burkholderia phytofirmans PsJN 6283682 YP_001896770.1 CDS Bphyt_3154 NC_010681.1 3549639 3550835 R PFAM: fatty acid desaturase; KEGG: bxe:Bxe_A0812 transmembrane fatty acid desaturase; fatty acid desaturase complement(3549639..3550835) Burkholderia phytofirmans PsJN 6283683 YP_001896771.1 CDS Bphyt_3155 NC_010681.1 3551038 3552393 R PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_A0811 small-conductance mechanosensitive channel, MscS family; mechanosensitive ion channel protein MscS complement(3551038..3552393) Burkholderia phytofirmans PsJN 6283684 YP_001896772.1 CDS Bphyt_3156 NC_010681.1 3552469 3553728 R PFAM: Fmu (Sun) domain protein; KEGG: bxe:Bxe_A0810 NOL1/NOP2/Sun family protein; Fmu (Sun) domain-containing protein complement(3552469..3553728) Burkholderia phytofirmans PsJN 6283685 YP_001896773.1 CDS Bphyt_3157 NC_010681.1 3553725 3554378 R KEGG: bxe:Bxe_A0809 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase; phosphoribosylglycinamide formyltransferase complement(3553725..3554378) Burkholderia phytofirmans PsJN 6283686 YP_001896774.1 CDS Bphyt_3158 NC_010681.1 3554496 3555491 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 3554496..3555491 Burkholderia phytofirmans PsJN 6283687 YP_001896775.1 CDS ileS NC_010681.1 3555664 3558501 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 3555664..3558501 Burkholderia phytofirmans PsJN 6283688 YP_001896776.1 CDS lspA NC_010681.1 3558501 3559019 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 3558501..3559019 Burkholderia phytofirmans PsJN 6280859 YP_001896777.1 CDS Bphyt_3161 NC_010681.1 3559131 3560345 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3559131..3560345 Burkholderia phytofirmans PsJN 6280860 YP_001896778.1 CDS Bphyt_3162 NC_010681.1 3560421 3561440 D PFAM: monooxygenase; KEGG: bxe:Bxe_A0804 luciferase-like monooxygenase; monooxygenase 3560421..3561440 Burkholderia phytofirmans PsJN 6280861 YP_001896779.1 CDS dut NC_010681.1 3561454 3561900 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 3561454..3561900 Burkholderia phytofirmans PsJN 6280862 YP_001896780.1 CDS Bphyt_3164 NC_010681.1 3562300 3564810 D KEGG: bxe:Bxe_A0802 hypothetical protein; hypothetical protein 3562300..3564810 Burkholderia phytofirmans PsJN 6280863 YP_001896781.1 CDS Bphyt_3165 NC_010681.1 3564877 3567174 R KEGG: bxe:Bxe_A0801 ATP-dependent Clp protease ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase AAA; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: ATPase AAA; ATP-dependent Clp protease ATP-binding subunit clpA complement(3564877..3567174) Burkholderia phytofirmans PsJN 6280864 YP_001896782.1 CDS clpS NC_010681.1 3567171 3567485 R involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS complement(3567171..3567485) Burkholderia phytofirmans PsJN 6282565 YP_001896783.1 CDS Bphyt_3167 NC_010681.1 3568034 3568240 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_A0798 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 3568034..3568240 Burkholderia phytofirmans PsJN 6282566 YP_001896784.1 CDS Bphyt_3168 NC_010681.1 3568438 3569253 R KEGG: gox:GOX0246 hypothetical protein; hypothetical protein complement(3568438..3569253) Burkholderia phytofirmans PsJN 6282567 YP_001896785.1 CDS Bphyt_3169 NC_010681.1 3569555 3570811 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(3569555..3570811) Burkholderia phytofirmans PsJN 6282568 YP_001896786.1 CDS Bphyt_3170 NC_010681.1 3571127 3571696 D PFAM: pseudouridine synthase; KEGG: bxe:Bxe_A0796 pseudouridine synthase, Rsu; pseudouridine synthase 3571127..3571696 Burkholderia phytofirmans PsJN 6282569 YP_001896787.1 CDS Bphyt_3171 NC_010681.1 3572493 3573011 D PFAM: protein of unknown function DUF192; KEGG: bxe:Bxe_A0794 hypothetical protein; hypothetical protein 3572493..3573011 Burkholderia phytofirmans PsJN 6282570 YP_001896788.1 CDS Bphyt_3172 NC_010681.1 3573342 3575447 D TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: bxe:Bxe_A0793 translation elongation factor G; translation elongation factor G 3573342..3575447 Burkholderia phytofirmans PsJN 6282571 YP_001896789.1 CDS Bphyt_3173 NC_010681.1 3575624 3576139 D PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_A0792 hypothetical protein; cupin 3575624..3576139 Burkholderia phytofirmans PsJN 6281500 YP_001896790.1 CDS Bphyt_3174 NC_010681.1 3576158 3577177 D TIGRFAM: high-affinity nickel-transporter; KEGG: bxe:Bxe_A0791 high-affinity nickel-transporter (NiCoT) family; high-affinity nickel-transporter 3576158..3577177 Burkholderia phytofirmans PsJN 6281501 YP_001896791.1 CDS Bphyt_3175 NC_010681.1 3577494 3579158 D PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A0790 ABC oligopeptide/dipeptide transporter periplasmic ligand binding protein; family 5 extracellular solute-binding protein 3577494..3579158 Burkholderia phytofirmans PsJN 6281502 YP_001896792.1 CDS Bphyt_3176 NC_010681.1 3579203 3580213 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0789 ABC oligopeptide/dipeptide transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 3579203..3580213 Burkholderia phytofirmans PsJN 6281503 YP_001896793.1 CDS Bphyt_3177 NC_010681.1 3580210 3581076 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0788 ABC oligopeptide/dipeptide transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 3580210..3581076 Burkholderia phytofirmans PsJN 6281504 YP_001896794.1 CDS Bphyt_3178 NC_010681.1 3581073 3583256 D KEGG: bxe:Bxe_A0787 ABC oligopeptide/dipeptide transporter fused ATPases; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase 3581073..3583256 Burkholderia phytofirmans PsJN 6281505 YP_001896795.1 CDS Bphyt_3179 NC_010681.1 3583698 3584558 D KEGG: bxe:Bxe_A0786 lipoprotein; lipoprotein 3583698..3584558 Burkholderia phytofirmans PsJN 6281506 YP_001896796.1 CDS Bphyt_3180 NC_010681.1 3584906 3585385 D KEGG: bxe:Bxe_A0785 hypothetical protein; hypothetical protein 3584906..3585385 Burkholderia phytofirmans PsJN 6282453 YP_001896797.1 CDS Bphyt_3181 NC_010681.1 3585401 3586246 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A0784 aldo/keto reductase family oxidoreductase; aldo/keto reductase complement(3585401..3586246) Burkholderia phytofirmans PsJN 6282454 YP_001896798.1 CDS Bphyt_3182 NC_010681.1 3586438 3587184 D PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bxe:Bxe_A0783 transcriptional regulator, GntR family; GntR family transcriptional regulator 3586438..3587184 Burkholderia phytofirmans PsJN 6282455 YP_001896799.1 CDS Bphyt_3183 NC_010681.1 3587276 3588676 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A0782 CoA transferase family protein; L-carnitine dehydratase/bile acid-inducible protein F complement(3587276..3588676) Burkholderia phytofirmans PsJN 6282456 YP_001896800.1 CDS Bphyt_3184 NC_010681.1 3588793 3590034 D PFAM: regulatory protein MerR; citrate synthase; KEGG: bxe:Bxe_A0781 bifunctional --MerR family transcriptional regulator / citrate synthase; citrate synthase 3588793..3590034 Burkholderia phytofirmans PsJN 6282457 YP_001896801.1 CDS Bphyt_3185 NC_010681.1 3590072 3590377 R KEGG: bch:Bcen2424_2535 hypothetical protein; hypothetical protein complement(3590072..3590377) Burkholderia phytofirmans PsJN 6282458 YP_001896802.1 CDS Bphyt_3186 NC_010681.1 3590567 3591985 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: bxe:Bxe_A0780 bifunctional --transcriptional regulator, GntR family / aminotransferase, class I and II; GntR family transcriptional regulator 3590567..3591985 Burkholderia phytofirmans PsJN 6281270 YP_001896803.1 CDS Bphyt_3187 NC_010681.1 3592062 3593519 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0779 MFS drug efflux pump, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 3592062..3593519 Burkholderia phytofirmans PsJN 6281271 YP_001896804.1 CDS Bphyt_3188 NC_010681.1 3593736 3595046 D PFAM: EAL domain protein; KEGG: bxe:Bxe_A0778 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 3593736..3595046 Burkholderia phytofirmans PsJN 6281272 YP_001896805.1 CDS Bphyt_3189 NC_010681.1 3595002 3595988 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_A0777 sigma-24 (FecI); ECF subfamily RNA polymerase sigma-24 subunit complement(3595002..3595988) Burkholderia phytofirmans PsJN 6281273 YP_001896806.1 CDS Bphyt_3190 NC_010681.1 3596284 3596931 D KEGG: bxe:Bxe_A0776 peptidase S14, ClpP; TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease proteolytic subunit ClpP 3596284..3596931 Burkholderia phytofirmans PsJN 6281274 YP_001896807.1 CDS Bphyt_3191 NC_010681.1 3597175 3598611 D PFAM: protein of unknown function DUF88; KEGG: bxe:Bxe_A0775 hypothetical protein; hypothetical protein 3597175..3598611 Burkholderia phytofirmans PsJN 6281275 YP_001896808.1 CDS Bphyt_3192 NC_010681.1 3598721 3600511 R KEGG: bxe:Bxe_A0774 hypothetical protein; hypothetical protein complement(3598721..3600511) Burkholderia phytofirmans PsJN 6281276 YP_001896809.1 CDS Bphyt_3193 NC_010681.1 3600772 3601359 R KEGG: bxe:Bxe_A0773 hypothetical protein; hypothetical protein complement(3600772..3601359) Burkholderia phytofirmans PsJN 6281120 YP_001896810.1 CDS Bphyt_3194 NC_010681.1 3601739 3602317 R PFAM: manganese and iron superoxide dismutase; KEGG: bxe:Bxe_A0769 superoxide dismutase; superoxide dismutase complement(3601739..3602317) Burkholderia phytofirmans PsJN 6281121 YP_001896811.1 CDS xseA NC_010681.1 3602537 3603916 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(3602537..3603916) Burkholderia phytofirmans PsJN 6281122 YP_001896812.1 CDS Bphyt_3196 NC_010681.1 3604483 3605499 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 3604483..3605499 Burkholderia phytofirmans PsJN 6281123 YP_001896813.1 CDS Bphyt_3197 NC_010681.1 3605480 3605683 D PFAM: protein of unknown function DUF343; KEGG: bxe:Bxe_A0765 hypothetical protein; hypothetical protein 3605480..3605683 Burkholderia phytofirmans PsJN 6281124 YP_001896814.1 CDS Bphyt_3198 NC_010681.1 3605833 3606633 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 3605833..3606633 Burkholderia phytofirmans PsJN 6281125 YP_001896815.1 CDS adk NC_010681.1 3606842 3607507 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 3606842..3607507 Burkholderia phytofirmans PsJN 6281126 YP_001896816.1 CDS Bphyt_3200 NC_010681.1 3607779 3608537 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A0762 3-hydroxyacyl-CoA dehydrogenase; short-chain dehydrogenase/reductase SDR 3607779..3608537 Burkholderia phytofirmans PsJN 6281252 YP_001896817.1 CDS Bphyt_3201 NC_010681.1 3608663 3609505 R KEGG: bxe:Bxe_A0761 hypothetical protein; hypothetical protein complement(3608663..3609505) Burkholderia phytofirmans PsJN 6281253 YP_001896818.1 CDS Bphyt_3202 NC_010681.1 3609511 3611061 R TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: bxe:Bxe_A0760 virulence factor MviN-like; integral membrane protein MviN complement(3609511..3611061) Burkholderia phytofirmans PsJN 6281254 YP_001896819.1 CDS rpsT NC_010681.1 3611577 3611855 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3611577..3611855 Burkholderia phytofirmans PsJN 6281255 YP_001896820.1 CDS Bphyt_3204 NC_010681.1 3612065 3612409 R KEGG: bxe:Bxe_A0758 hypothetical protein; hypothetical protein complement(3612065..3612409) Burkholderia phytofirmans PsJN 6281256 YP_001896821.1 CDS Bphyt_3205 NC_010681.1 3612849 3613778 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 3612849..3613778 Burkholderia phytofirmans PsJN 6281257 YP_001896822.1 CDS Bphyt_3206 NC_010681.1 3614041 3615267 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 3614041..3615267 Burkholderia phytofirmans PsJN 6283445 YP_001896823.1 CDS murB NC_010681.1 3615517 3616557 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(3615517..3616557) Burkholderia phytofirmans PsJN 6283446 YP_001896824.1 CDS Bphyt_3208 NC_010681.1 3616767 3617252 D nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 3616767..3617252 Burkholderia phytofirmans PsJN 6283447 YP_001896825.1 CDS Bphyt_3209 NC_010681.1 3617622 3618266 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY complement(3617622..3618266) Burkholderia phytofirmans PsJN 6283448 YP_001896826.1 CDS Bphyt_3210 NC_010681.1 3618392 3618883 R TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bxe:Bxe_A0752 hypothetical protein; ybaK/ebsC protein complement(3618392..3618883) Burkholderia phytofirmans PsJN 6283449 YP_001896827.1 CDS Bphyt_3211 NC_010681.1 3619157 3620719 D PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A0751 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3619157..3620719 Burkholderia phytofirmans PsJN 6283450 YP_001896828.1 CDS xerD NC_010681.1 3620739 3621674 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(3620739..3621674) Burkholderia phytofirmans PsJN 6283451 YP_001896829.1 CDS Bphyt_3213 NC_010681.1 3621671 3622141 R TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bxe:Bxe_A0749 methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(3621671..3622141) Burkholderia phytofirmans PsJN 6281540 YP_001896830.1 CDS Bphyt_3214 NC_010681.1 3622251 3623489 R TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: bxe:Bxe_A0748 4Fe-4S cluster binding; iron-sulfur cluster binding protein complement(3622251..3623489) Burkholderia phytofirmans PsJN 6281541 YP_001896831.1 CDS Bphyt_3215 NC_010681.1 3623507 3624091 D PFAM: protein of unknown function UPF0079; KEGG: bxe:Bxe_A0747 protein of unknown function UPF0079; hypothetical protein 3623507..3624091 Burkholderia phytofirmans PsJN 6281542 YP_001896832.1 CDS Bphyt_3216 NC_010681.1 3624073 3625653 D PFAM: cell wall hydrolase/autolysin; KEGG: bxe:Bxe_A0746 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 3624073..3625653 Burkholderia phytofirmans PsJN 6281543 YP_001896833.1 CDS Bphyt_3217 NC_010681.1 3625711 3626592 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A0745 drug/metabolite efflux pump, DME (10TM) family, DMT superfamily; hypothetical protein complement(3625711..3626592) Burkholderia phytofirmans PsJN 6281544 YP_001896834.1 CDS Bphyt_3218 NC_010681.1 3626772 3627647 D PFAM: pirin; KEGG: bxe:Bxe_A0744 hypothetical protein; pirin 3626772..3627647 Burkholderia phytofirmans PsJN 6281545 YP_001896835.1 CDS Bphyt_3219 NC_010681.1 3627780 3628628 D KEGG: bxe:Bxe_A0743 thioredoxin; TIGRFAM: thioredoxin; PFAM: thioredoxin domain; SMART: hypothetical protein; thioredoxin 3627780..3628628 Burkholderia phytofirmans PsJN 6281546 YP_001896836.1 CDS Bphyt_3220 NC_010681.1 3628712 3629569 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bxe:Bxe_A0742 ThiF family protein; UBA/THIF-type NAD/FAD binding protein complement(3628712..3629569) Burkholderia phytofirmans PsJN 6282192 YP_001896837.1 CDS Bphyt_3221 NC_010681.1 3629796 3630437 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 3629796..3630437 Burkholderia phytofirmans PsJN 6282193 YP_001896838.1 CDS Bphyt_3222 NC_010681.1 3630579 3631793 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase type 11; methyltransferase type 12; KEGG: bxe:Bxe_A0740 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3630579..3631793 Burkholderia phytofirmans PsJN 6282194 YP_001896839.1 CDS Bphyt_3223 NC_010681.1 3631866 3633335 D PFAM: protein of unknown function DUF72; KEGG: bxe:Bxe_A0739 hypothetical protein; hypothetical protein 3631866..3633335 Burkholderia phytofirmans PsJN 6282195 YP_001896840.1 CDS Bphyt_3224 NC_010681.1 3633363 3633911 R TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A; KEGG: bxe:Bxe_A0738 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase complement(3633363..3633911) Burkholderia phytofirmans PsJN 6282196 YP_001896841.1 CDS Bphyt_3225 NC_010681.1 3634169 3634678 D PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_A0737 flavin reductase-like protein; flavin reductase domain-containing protein 3634169..3634678 Burkholderia phytofirmans PsJN 6282197 YP_001896842.1 CDS Bphyt_3226 NC_010681.1 3634697 3635212 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_A0736 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(3634697..3635212) Burkholderia phytofirmans PsJN 6280894 YP_001896843.1 CDS Bphyt_3227 NC_010681.1 3635343 3635981 D TIGRFAM: arylformamidase; PFAM: cyclase family protein; KEGG: bxe:Bxe_A0735 kynureninase; arylformamidase 3635343..3635981 Burkholderia phytofirmans PsJN 6280895 YP_001896844.1 CDS Bphyt_3228 NC_010681.1 3636010 3637260 D TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: bxe:Bxe_A0734 kynureninase; kynureninase 3636010..3637260 Burkholderia phytofirmans PsJN 6280896 YP_001896845.1 CDS Bphyt_3229 NC_010681.1 3637271 3638203 D TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; KEGG: bxe:Bxe_A0733 tryptophan 2,3-dioxygenase; tryptophan 2,3-dioxygenase 3637271..3638203 Burkholderia phytofirmans PsJN 6280897 YP_001896846.1 CDS Bphyt_3231 NC_010681.1 3639056 3639793 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_I2430 oxidoreductase, short chain dehydrogenase/reductase family; short chain dehydrogenase complement(3639056..3639793) Burkholderia phytofirmans PsJN 6280899 YP_001896847.1 CDS Bphyt_3232 NC_010681.1 3639790 3641334 R PFAM: carbohydrate kinase FGGY; KEGG: bcm:Bcenmc03_5467 xylulokinase; xylulokinase complement(3639790..3641334) Burkholderia phytofirmans PsJN 6280900 YP_001896848.1 CDS Bphyt_3233 NC_010681.1 3641381 3642478 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bmu:Bmul_3786 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase GroES domain-containing protein complement(3641381..3642478) Burkholderia phytofirmans PsJN 6283527 YP_001896849.1 CDS Bphyt_3234 NC_010681.1 3642516 3643523 R PFAM: inner-membrane translocator; KEGG: bcm:Bcenmc03_5465 monosaccharide-transporting ATPase; sugar ABC transporter ATPase complement(3642516..3643523) Burkholderia phytofirmans PsJN 6283528 YP_001896850.1 CDS Bphyt_3235 NC_010681.1 3643510 3645030 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcm:Bcenmc03_5464 ABC transporter; ABC transporter complement(3643510..3645030) Burkholderia phytofirmans PsJN 6283529 YP_001896851.1 CDS Bphyt_3236 NC_010681.1 3645098 3646051 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bcn:Bcen_3547 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator complement(3645098..3646051) Burkholderia phytofirmans PsJN 6283530 YP_001896852.1 CDS Bphyt_3237 NC_010681.1 3646165 3647142 R PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A0731 AraC family transcriptional regulator; AraC family transcriptional regulator complement(3646165..3647142) Burkholderia phytofirmans PsJN 6283531 YP_001896853.1 CDS Bphyt_3238 NC_010681.1 3647526 3648938 D PFAM: mannitol dehydrogenase; Mannitol dehydrogenase rossman domain; KEGG: bxe:Bxe_A0730 D-arabinitol 4-dehydrogenase; mannitol dehydrogenase 3647526..3648938 Burkholderia phytofirmans PsJN 6283532 YP_001896854.1 CDS Bphyt_3239 NC_010681.1 3649109 3650590 D TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bxe:Bxe_A0729 xylulokinase; xylulokinase 3649109..3650590 Burkholderia phytofirmans PsJN 6283533 YP_001896855.1 CDS Bphyt_3240 NC_010681.1 3650627 3651628 D PFAM: sugar-binding domain protein; KEGG: bxe:Bxe_A0728 transcriptional regulator; DeoR family transcriptional regulator 3650627..3651628 Burkholderia phytofirmans PsJN 6283345 YP_001896856.1 CDS Bphyt_3241 NC_010681.1 3651654 3651950 R PFAM: protein of unknown function DUF1330; KEGG: bxe:Bxe_A0727 hypothetical protein; hypothetical protein complement(3651654..3651950) Burkholderia phytofirmans PsJN 6283346 YP_001896857.1 CDS Bphyt_3242 NC_010681.1 3652008 3653117 R PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: bxe:Bxe_A0724 ABC sugar transporter ATPase; ABC transporter complement(3652008..3653117) Burkholderia phytofirmans PsJN 6283347 YP_001896858.1 CDS Bphyt_3243 NC_010681.1 3653224 3653937 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: bxe:Bxe_A0723 HAD-superfamily hydrolase, subfamily IA, variant3; HAD family hydrolase complement(3653224..3653937) Burkholderia phytofirmans PsJN 6283348 YP_001896859.1 CDS Bphyt_3244 NC_010681.1 3653934 3654809 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0722 ABC sugar transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3653934..3654809) Burkholderia phytofirmans PsJN 6283349 YP_001896860.1 CDS Bphyt_3245 NC_010681.1 3654806 3655741 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0721 ABC sugar transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3654806..3655741) Burkholderia phytofirmans PsJN 6283350 YP_001896861.1 CDS Bphyt_3246 NC_010681.1 3655894 3657216 R PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A0720 ABC sugar transporter periplasmic ligand binding protein; sugar ABC transporter substrate-binding protein complement(3655894..3657216) Burkholderia phytofirmans PsJN 6283110 YP_001896862.1 CDS Bphyt_3247 NC_010681.1 3657289 3658071 R Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase complement(3657289..3658071) Burkholderia phytofirmans PsJN 6283111 YP_001896863.1 CDS Bphyt_3248 NC_010681.1 3658404 3658898 D PFAM: transcriptional regulator TrmB; KEGG: bxe:Bxe_A0718 ferric uptake regulator (FUR) family; TrmB family transcriptional regulator 3658404..3658898 Burkholderia phytofirmans PsJN 6283112 YP_001896864.1 CDS Bphyt_3249 NC_010681.1 3658958 3659926 D PFAM: periplasmic solute binding protein; KEGG: bxe:Bxe_A0717 ABC Mn2+/Zn2+ transporter periplasmic ligand binding protein; periplasmic solute binding protein 3658958..3659926 Burkholderia phytofirmans PsJN 6283113 YP_001896865.1 CDS Bphyt_3250 NC_010681.1 3659923 3660864 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A0716 ABC Mn2+/Zn2+ transporter ATPase; ABC transporter 3659923..3660864 Burkholderia phytofirmans PsJN 6283114 YP_001896866.1 CDS Bphyt_3251 NC_010681.1 3660857 3661639 D PFAM: ABC transporter; KEGG: bxe:Bxe_A0715 ABC Mn2+/Zn2+ transporter inner membrane subunit; ABC transporter 3660857..3661639 Burkholderia phytofirmans PsJN 6283115 YP_001896867.1 CDS Bphyt_3252 NC_010681.1 3661698 3662549 R KEGG: bxe:Bxe_A0714 S-formylglutathione hydrolase (FghA); TIGRFAM: S-formylglutathione hydrolase; PFAM: esterase; S-formylglutathione hydrolase complement(3661698..3662549) Burkholderia phytofirmans PsJN 6283116 YP_001896868.1 CDS Bphyt_3253 NC_010681.1 3662564 3663670 R TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_A0713 glutathione-dependent formaldehyde dehydrogenase(FlhA); S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase complement(3662564..3663670) Burkholderia phytofirmans PsJN 6282391 YP_001896869.1 CDS Bphyt_3254 NC_010681.1 3663901 3665421 R PFAM: carbohydrate kinase FGGY; KEGG: bxe:Bxe_A0712 sugar kinase protein; carbohydrate kinase FGGY complement(3663901..3665421) Burkholderia phytofirmans PsJN 6282392 YP_001896870.1 CDS Bphyt_3255 NC_010681.1 3665809 3667218 D TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: bxe:Bxe_A0711 xanthine/uracil - cation symporter, NCS2 family; xanthine permease 3665809..3667218 Burkholderia phytofirmans PsJN 6282393 YP_001896871.1 CDS Bphyt_3256 NC_010681.1 3667387 3668964 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A0710 RND efflux system, outer membrane lipoprotein, NodT subfamily; NodT family RND efflux system outer membrane lipoprotein complement(3667387..3668964) Burkholderia phytofirmans PsJN 6282394 YP_001896872.1 CDS Bphyt_3257 NC_010681.1 3668966 3672187 R TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A0709 RND family hydrophobe/amphiphile efflux pump; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3668966..3672187) Burkholderia phytofirmans PsJN 6282395 YP_001896873.1 CDS Bphyt_3258 NC_010681.1 3672206 3673438 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: bxe:Bxe_A0708 membrane fusion protein, RND efflux pump; RND family efflux transporter MFP subunit complement(3672206..3673438) Burkholderia phytofirmans PsJN 6282396 YP_001896874.1 CDS Bphyt_3259 NC_010681.1 3673867 3674526 D PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: bxe:Bxe_A0707 TetR family transcriptional regulator; TetR family transcriptional regulator 3673867..3674526 Burkholderia phytofirmans PsJN 6282397 YP_001896875.1 CDS Bphyt_3260 NC_010681.1 3674702 3675334 R PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_A0706 isochorismatase hydrolase; isochorismatase hydrolase complement(3674702..3675334) Burkholderia phytofirmans PsJN 6283130 YP_001896876.1 CDS Bphyt_3261 NC_010681.1 3675500 3676513 D PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_A0705 transcriptional regulator, AraC family; AraC family transcriptional regulator 3675500..3676513 Burkholderia phytofirmans PsJN 6283131 YP_001896877.1 CDS Bphyt_3262 NC_010681.1 3676651 3677412 R PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bxe:Bxe_A0704 hypothetical protein; carbon monoxide dehydrogenase subunit G complement(3676651..3677412) Burkholderia phytofirmans PsJN 6283132 YP_001896878.1 CDS Bphyt_3263 NC_010681.1 3677446 3677838 R PFAM: protein of unknown function DUF427; KEGG: bxe:Bxe_A0703 hypothetical protein; hypothetical protein complement(3677446..3677838) Burkholderia phytofirmans PsJN 6283133 YP_001896879.1 CDS Bphyt_3264 NC_010681.1 3677989 3678486 R KEGG: bxe:Bxe_A0702 hypothetical protein; hypothetical protein complement(3677989..3678486) Burkholderia phytofirmans PsJN 6283134 YP_001896880.1 CDS Bphyt_3265 NC_010681.1 3678789 3680303 R KEGG: bxe:Bxe_A0701 serine protease subfamily S1C; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(3678789..3680303) Burkholderia phytofirmans PsJN 6283135 YP_001896881.1 CDS Bphyt_3266 NC_010681.1 3680461 3681762 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A0700 signal transduction histidine kinases (STHK); integral membrane sensor signal transduction histidine kinase complement(3680461..3681762) Burkholderia phytofirmans PsJN 6283583 YP_001896882.1 CDS Bphyt_3267 NC_010681.1 3681767 3682429 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0699 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator complement(3681767..3682429) Burkholderia phytofirmans PsJN 6283584 YP_001896883.1 CDS Bphyt_3268 NC_010681.1 3682826 3684406 D KEGG: bxe:Bxe_A0698 peptidase S13, D-Ala-D-Ala carboxypeptidase C; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 3682826..3684406 Burkholderia phytofirmans PsJN 6283585 YP_001896884.1 CDS Bphyt_3269 NC_010681.1 3684599 3685561 D PFAM: fatty acid hydroxylase; KEGG: bxe:Bxe_A0697 hypothetical protein; fatty acid hydroxylase 3684599..3685561 Burkholderia phytofirmans PsJN 6283586 YP_001896885.1 CDS Bphyt_3270 NC_010681.1 3685656 3686906 D KEGG: bxe:Bxe_A0696 lipase / esterase; lipase / esterase 3685656..3686906 Burkholderia phytofirmans PsJN 6283587 YP_001896886.1 CDS Bphyt_3271 NC_010681.1 3687006 3688046 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: bxe:Bxe_A0695 SUA5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein complement(3687006..3688046) Burkholderia phytofirmans PsJN 6283588 YP_001896887.1 CDS Bphyt_3272 NC_010681.1 3688057 3689253 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(3688057..3689253) Burkholderia phytofirmans PsJN 6283589 YP_001896888.1 CDS Bphyt_3273 NC_010681.1 3689372 3689890 R KEGG: bxe:Bxe_A0693 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate(AIR) carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(3689372..3689890) Burkholderia phytofirmans PsJN 6281318 YP_001896889.1 CDS Bphyt_3274 NC_010681.1 3690122 3691012 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole succinocarboxamide synthase complement(3690122..3691012) Burkholderia phytofirmans PsJN 6281319 YP_001896890.1 CDS Bphyt_3275 NC_010681.1 3691145 3692209 R class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase complement(3691145..3692209) Burkholderia phytofirmans PsJN 6281320 YP_001896891.1 CDS Bphyt_3276 NC_010681.1 3692490 3693926 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(3692490..3693926) Burkholderia phytofirmans PsJN 6281321 YP_001896892.1 CDS pgk NC_010681.1 3694387 3695580 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(3694387..3695580) Burkholderia phytofirmans PsJN 6281322 YP_001896893.1 CDS Bphyt_3278 NC_010681.1 3695852 3696175 R PFAM: branched-chain amino acid ABC transporter; KEGG: bxe:Bxe_A0688 hypothetical protein; branched-chain amino acid ABC transporter complement(3695852..3696175) Burkholderia phytofirmans PsJN 6281323 YP_001896894.1 CDS Bphyt_3279 NC_010681.1 3696172 3696918 R PFAM: AzlC family protein; KEGG: bxe:Bxe_A0687 branched chain amino acid efflux pump, LivE family; AzlC family protein complement(3696172..3696918) Burkholderia phytofirmans PsJN 6281324 YP_001896895.1 CDS Bphyt_3280 NC_010681.1 3697139 3698062 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3697139..3698062 Burkholderia phytofirmans PsJN 6284084 YP_001896896.1 CDS Bphyt_3281 NC_010681.1 3698125 3698319 D KEGG: bxe:Bxe_A0685 hypothetical protein; hypothetical protein 3698125..3698319 Burkholderia phytofirmans PsJN 6284085 YP_001896897.1 CDS Bphyt_3282 NC_010681.1 3698489 3699514 D TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: bxe:Bxe_A0684 ADP-heptose--LPS heptosyltransferaseII; lipopolysaccharide heptosyltransferase II 3698489..3699514 Burkholderia phytofirmans PsJN 6284086 YP_001896898.1 CDS Bphyt_3283 NC_010681.1 3699682 3700128 D KEGG: bxe:Bxe_A0683 hypothetical protein; hypothetical protein 3699682..3700128 Burkholderia phytofirmans PsJN 6284087 YP_001896899.1 CDS Bphyt_3284 NC_010681.1 3700168 3701286 D KEGG: bxe:Bxe_A0682 hydrolase of the alpha/beta-hydrolase fold; alpha/beta fold family hydrolase 3700168..3701286 Burkholderia phytofirmans PsJN 6284088 YP_001896900.1 CDS Bphyt_3285 NC_010681.1 3701279 3701866 D KEGG: bxe:Bxe_A0681 hypothetical protein; hypothetical protein 3701279..3701866 Burkholderia phytofirmans PsJN 6284089 YP_001896901.1 CDS Bphyt_3286 NC_010681.1 3701945 3703654 R PFAM: peptidase M48 Ste24p; KEGG: bxe:Bxe_A0680 hypothetical protein; peptidase M48 Ste24p complement(3701945..3703654) Burkholderia phytofirmans PsJN 6281975 YP_001896902.1 CDS moaC NC_010681.1 3703899 3704375 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein C 3703899..3704375 Burkholderia phytofirmans PsJN 6281976 YP_001896903.1 CDS Bphyt_3288 NC_010681.1 3704474 3706258 R PFAM: O-antigen polymerase; KEGG: bxe:Bxe_A0678 hypothetical protein; O-antigen polymerase complement(3704474..3706258) Burkholderia phytofirmans PsJN 6281977 YP_001896904.1 CDS Bphyt_3289 NC_010681.1 3706417 3707040 R KEGG: bxe:Bxe_A0677 type IV fimbrial pilin protein; type IV fimbrial pilin protein complement(3706417..3707040) Burkholderia phytofirmans PsJN 6281978 YP_001896905.1 CDS Bphyt_3290 NC_010681.1 3707184 3707888 R PFAM: integral membrane protein TerC; KEGG: bxe:Bxe_A0676 hypothetical protein; integral membrane protein TerC complement(3707184..3707888) Burkholderia phytofirmans PsJN 6281979 YP_001896906.1 CDS Bphyt_3291 NC_010681.1 3708033 3708914 R Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha complement(3708033..3708914) Burkholderia phytofirmans PsJN 6281980 YP_001896907.1 CDS sucC NC_010681.1 3709039 3710208 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(3709039..3710208) Burkholderia phytofirmans PsJN 6281981 YP_001896908.1 CDS Bphyt_3293 NC_010681.1 3710205 3710945 R KEGG: bxe:Bxe_A0673 hypothetical protein; hypothetical protein complement(3710205..3710945) Burkholderia phytofirmans PsJN 6282140 YP_001896909.1 CDS Bphyt_3294 NC_010681.1 3711095 3711802 R PFAM: regulatory protein RecX; KEGG: bxe:Bxe_A0672 regulatory protein RecX; regulatory protein RecX complement(3711095..3711802) Burkholderia phytofirmans PsJN 6282141 YP_001896910.1 CDS recA NC_010681.1 3711810 3712886 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(3711810..3712886) Burkholderia phytofirmans PsJN 6282142 YP_001896911.1 CDS Bphyt_3296 NC_010681.1 3713118 3713900 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0670 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 3713118..3713900 Burkholderia phytofirmans PsJN 6282143 YP_001896912.1 CDS Bphyt_3297 NC_010681.1 3713910 3715457 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bxe:Bxe_A0669 signal transduction histidine kinases (STHK); integral membrane sensor signal transduction histidine kinase 3713910..3715457 Burkholderia phytofirmans PsJN 6282144 YP_001896913.1 CDS Bphyt_3298 NC_010681.1 3715675 3717333 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0668 major facilitator superfamily (MFS) transporter; general substrate transporter 3715675..3717333 Burkholderia phytofirmans PsJN 6282145 YP_001896914.1 CDS Bphyt_3299 NC_010681.1 3717594 3717944 D KEGG: bxe:Bxe_A0664 hypothetical protein; hypothetical protein 3717594..3717944 Burkholderia phytofirmans PsJN 6284515 YP_001896915.1 CDS Bphyt_3300 NC_010681.1 3718074 3718517 R PFAM: regulatory protein MarR; KEGG: bxe:Bxe_A0659 MarR family transcriptional regulator; MarR family transcriptional regulator complement(3718074..3718517) Burkholderia phytofirmans PsJN 6284516 YP_001896916.1 CDS Bphyt_3301 NC_010681.1 3718653 3720191 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0658 major facilitator superfamily (MFS) drug efflux pump, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 3718653..3720191 Burkholderia phytofirmans PsJN 6284517 YP_001896917.1 CDS Bphyt_3302 NC_010681.1 3720249 3721055 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_A0657 GntR family transcriptional regulator; GntR family transcriptional regulator complement(3720249..3721055) Burkholderia phytofirmans PsJN 6284518 YP_001896918.1 CDS Bphyt_3303 NC_010681.1 3721211 3722359 D PFAM: mandelate racemase/muconate lactonizing protein; KEGG: bxe:Bxe_A0656 galactonate dehydratase; galactonate dehydratase 3721211..3722359 Burkholderia phytofirmans PsJN 6284519 YP_001896919.1 CDS Bphyt_3304 NC_010681.1 3722647 3722949 D KEGG: bxe:Bxe_A0655 hypothetical protein; hypothetical protein 3722647..3722949 Burkholderia phytofirmans PsJN 6282062 YP_001896920.1 CDS Bphyt_3305 NC_010681.1 3722984 3723193 D KEGG: bxe:Bxe_A0654 hypothetical protein; hypothetical protein 3722984..3723193 Burkholderia phytofirmans PsJN 6282063 YP_001896921.1 CDS Bphyt_3306 NC_010681.1 3723388 3724323 R PFAM: copper resistance protein D; KEGG: bxe:Bxe_A0653 copper-resistance transporter CopD; copper resistance protein D complement(3723388..3724323) Burkholderia phytofirmans PsJN 6282064 YP_001896922.1 CDS Bphyt_3307 NC_010681.1 3724320 3724655 R PFAM: copper resistance protein C; KEGG: bxe:Bxe_A0652 copper resistance protein, CopC; copper resistance protein C complement(3724320..3724655) Burkholderia phytofirmans PsJN 6282065 YP_001896923.1 CDS Bphyt_3308 NC_010681.1 3725068 3725799 D PFAM: cytochrome C class I; KEGG: bxe:Bxe_A0651 periplasmic cytochrome C; cytochrome C class I 3725068..3725799 Burkholderia phytofirmans PsJN 6282066 YP_001896924.1 CDS Bphyt_3309 NC_010681.1 3725821 3727119 D PFAM: cytochrome C class I; KEGG: bxe:Bxe_A0650 periplasmic cytochrome C; gluconate 2-dehydrogenase 3725821..3727119 Burkholderia phytofirmans PsJN 6282067 YP_001896925.1 CDS Bphyt_3310 NC_010681.1 3727314 3727934 D TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: bxe:Bxe_A0649 hemolysin HylII; hemolysin III family channel protein 3727314..3727934 Burkholderia phytofirmans PsJN 6282068 YP_001896926.1 CDS Bphyt_3311 NC_010681.1 3728148 3729695 D PFAM: helicase; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_A0648 ATP-dependent RNA helicase 1; DEAD/DEAH box helicase 3728148..3729695 Burkholderia phytofirmans PsJN 6284233 YP_001896927.1 CDS Bphyt_3312 NC_010681.1 3729744 3730268 R KEGG: bxe:Bxe_A0647 hypothetical protein; hypothetical protein complement(3729744..3730268) Burkholderia phytofirmans PsJN 6284234 YP_001896928.1 CDS Bphyt_3313 NC_010681.1 3730372 3731199 R KEGG: bxe:Bxe_A0646 hypothetical protein; hypothetical protein complement(3730372..3731199) Burkholderia phytofirmans PsJN 6284235 YP_001896929.1 CDS Bphyt_3314 NC_010681.1 3731548 3732921 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0645 major facilitator superfamily (MFS) metabolite/H+ symporter; major facilitator superfamily protein complement(3731548..3732921) Burkholderia phytofirmans PsJN 6284236 YP_001896930.1 CDS Bphyt_3315 NC_010681.1 3733110 3734747 R KEGG: bxe:Bxe_A0644 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(3733110..3734747) Burkholderia phytofirmans PsJN 6284237 YP_001896931.1 CDS Bphyt_3316 NC_010681.1 3735101 3735880 D PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bxe:Bxe_A0643 DeoR family transcriptional regulator; DeoR family transcriptional regulator 3735101..3735880 Burkholderia phytofirmans PsJN 6284238 YP_001896932.1 CDS Bphyt_3317 NC_010681.1 3736198 3736395 D KEGG: bxe:Bxe_A0642 hypothetical protein; hypothetical protein 3736198..3736395 Burkholderia phytofirmans PsJN 6284239 YP_001896933.1 CDS Bphyt_3318 NC_010681.1 3736605 3737234 D PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A0641 TetR family transcriptional regulator; TetR family transcriptional regulator 3736605..3737234 Burkholderia phytofirmans PsJN 6284598 YP_001896934.1 CDS Bphyt_3319 NC_010681.1 3737310 3737684 R KEGG: bxe:Bxe_A0640 hypothetical protein; hypothetical protein complement(3737310..3737684) Burkholderia phytofirmans PsJN 6284599 YP_001896935.1 CDS glpD NC_010681.1 3737887 3739416 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 3737887..3739416 Burkholderia phytofirmans PsJN 6284600 YP_001896936.1 CDS glpK NC_010681.1 3739596 3741095 D Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 3739596..3741095 Burkholderia phytofirmans PsJN 6284601 YP_001896937.1 CDS Bphyt_3322 NC_010681.1 3741181 3741894 D TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: bxe:Bxe_A0637 major intrinsic protein, glycerol uptake channel; MIP family channel protein 3741181..3741894 Burkholderia phytofirmans PsJN 6284602 YP_001896938.1 CDS Bphyt_3323 NC_010681.1 3742072 3742758 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: bxe:Bxe_A0636 HAD-superfamily hydrolase, subfamily IA, variant3; HAD family hydrolase 3742072..3742758 Burkholderia phytofirmans PsJN 6284603 YP_001896939.1 CDS Bphyt_3324 NC_010681.1 3743004 3743723 R TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; KEGG: bxe:Bxe_A0635 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(3743004..3743723) Burkholderia phytofirmans PsJN 6284240 YP_001896940.1 CDS Bphyt_3325 NC_010681.1 3744174 3744863 R PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_A0634 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(3744174..3744863) Burkholderia phytofirmans PsJN 6284241 YP_001896941.1 CDS Bphyt_3326 NC_010681.1 3745052 3746218 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0633 major facilitator family (MFS) transporter; major facilitator superfamily protein complement(3745052..3746218) Burkholderia phytofirmans PsJN 6284242 YP_001896942.1 CDS Bphyt_3327 NC_010681.1 3746235 3746669 R KEGG: bxe:Bxe_A0632 hypothetical protein; hypothetical protein complement(3746235..3746669) Burkholderia phytofirmans PsJN 6284243 YP_001896943.1 CDS Bphyt_3328 NC_010681.1 3746745 3747728 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A0631 LysR family transcriptional regulator; LysR family transcriptional regulator 3746745..3747728 Burkholderia phytofirmans PsJN 6284244 YP_001896944.1 CDS Bphyt_3329 NC_010681.1 3747892 3749265 D KEGG: bxe:Bxe_A0630 tRNA-i(6)A37 modification enzyme MiaB; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: deoxyribonuclease/rho motif-related TRAM; radical SAM protein; protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase protein MiaB 3747892..3749265 Burkholderia phytofirmans PsJN 6284245 YP_001896945.1 CDS Bphyt_3330 NC_010681.1 3749312 3750385 D PFAM: PhoH family protein; KEGG: bxe:Bxe_A0629 PhoH-family protein; PhoH family protein 3749312..3750385 Burkholderia phytofirmans PsJN 6280985 YP_001896946.1 CDS Bphyt_3331 NC_010681.1 3750433 3750894 D PFAM: protein of unknown function UPF0054; KEGG: bxe:Bxe_A0628 protein of unknown function UPF0054; hypothetical protein 3750433..3750894 Burkholderia phytofirmans PsJN 6280986 YP_001896947.1 CDS Bphyt_3332 NC_010681.1 3750942 3751679 D PFAM: cation transport protein ChaC; KEGG: bxe:Bxe_A0627 ChaC-like protein; cation transport protein ChaC 3750942..3751679 Burkholderia phytofirmans PsJN 6280987 YP_001896948.1 CDS Bphyt_3333 NC_010681.1 3751839 3752774 D PFAM: hypothetical protein; transporter-associated region; KEGG: bxe:Bxe_A0626 Mg2+ and Co2+ transporter CorC family; transporter-associated protein 3751839..3752774 Burkholderia phytofirmans PsJN 6280988 YP_001896949.1 CDS lnt NC_010681.1 3752834 3754582 D transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 3752834..3754582 Burkholderia phytofirmans PsJN 6280989 YP_001896950.1 CDS Bphyt_3335 NC_010681.1 3754723 3755481 R PFAM: peptidase M48 Ste24p; KEGG: ypi:YpsIP31758_0845 peptidase, M48 family; peptidase M48 Ste24p complement(3754723..3755481) Burkholderia phytofirmans PsJN 6280990 YP_001896951.1 CDS Bphyt_3336 NC_010681.1 3755760 3756374 R PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A0624 glutathione S-transferase; glutathione S-transferase complement(3755760..3756374) Burkholderia phytofirmans PsJN 6280991 YP_001896952.1 CDS Bphyt_3337 NC_010681.1 3756482 3757981 D PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: bxe:Bxe_A0623 , Xaa-Pro aminopeptidase; peptidase M24 3756482..3757981 Burkholderia phytofirmans PsJN 6281482 YP_001896953.1 CDS Bphyt_3338 NC_010681.1 3758001 3759389 D TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_A0622 hypothetical protein; hypothetical protein 3758001..3759389 Burkholderia phytofirmans PsJN 6281483 YP_001896954.1 CDS Bphyt_3339 NC_010681.1 3759627 3760691 D TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase; dihydroorotate dehydrogenase; KEGG: bxe:Bxe_A0621 dihydrouridine synthase TIM-barrel protein nifR3; hypothetical protein 3759627..3760691 Burkholderia phytofirmans PsJN 6281484 YP_001896955.1 CDS Bphyt_3340 NC_010681.1 3760688 3760921 D PFAM: helix-turn-helix Fis-type; KEGG: bxe:Bxe_A0620 DNA-binding protein fis; DNA-binding protein Fis 3760688..3760921 Burkholderia phytofirmans PsJN 6281485 YP_001896956.1 CDS purH NC_010681.1 3760987 3762552 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3760987..3762552 Burkholderia phytofirmans PsJN 6281486 YP_001896957.1 CDS Bphyt_3342 NC_010681.1 3762764 3763003 R KEGG: bxe:Bxe_A0618 hypothetical protein; hypothetical protein complement(3762764..3763003) Burkholderia phytofirmans PsJN 6281487 YP_001896958.1 CDS ruvC NC_010681.1 3763132 3763674 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3763132..3763674 Burkholderia phytofirmans PsJN 6283657 YP_001896959.1 CDS Bphyt_3344 NC_010681.1 3763872 3764504 R PFAM: lysine exporter (LYSE/YGGA); KEGG: bcm:Bcenmc03_4155 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA complement(3763872..3764504) Burkholderia phytofirmans PsJN 6283658 YP_001896960.1 CDS ruvA NC_010681.1 3764665 3765246 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3764665..3765246 Burkholderia phytofirmans PsJN 6283659 YP_001896961.1 CDS ruvB NC_010681.1 3765369 3766433 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3765369..3766433 Burkholderia phytofirmans PsJN 6283660 YP_001896962.1 CDS Bphyt_3347 NC_010681.1 3766469 3767410 D KEGG: bxe:Bxe_A0614 hypothetical protein; hypothetical protein 3766469..3767410 Burkholderia phytofirmans PsJN 6283661 YP_001896963.1 CDS Bphyt_3348 NC_010681.1 3767588 3768259 R PFAM: phosphoglycerate mutase; KEGG: bxe:Bxe_A0613 phosphoglycerate mutase; phosphoglycerate mutase complement(3767588..3768259) Burkholderia phytofirmans PsJN 6283662 YP_001896964.1 CDS Bphyt_3349 NC_010681.1 3768364 3768822 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(3768364..3768822) Burkholderia phytofirmans PsJN 6283663 YP_001896965.1 CDS Bphyt_3350 NC_010681.1 3768854 3770104 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(3768854..3770104) Burkholderia phytofirmans PsJN 6282121 YP_001896966.1 CDS anmK NC_010681.1 3770311 3771441 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3770311..3771441 Burkholderia phytofirmans PsJN 6282122 YP_001896967.1 CDS Bphyt_3352 NC_010681.1 3771525 3771890 R essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA complement(3771525..3771890) Burkholderia phytofirmans PsJN 6282123 YP_001896968.1 CDS rpsI NC_010681.1 3772169 3772561 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(3772169..3772561) Burkholderia phytofirmans PsJN 6282124 YP_001896969.1 CDS rplM NC_010681.1 3772573 3773001 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(3772573..3773001) Burkholderia phytofirmans PsJN 6282125 YP_001896970.1 CDS Bphyt_3355 NC_010681.1 3773652 3774074 D PFAM: OsmC family protein; KEGG: bxe:Bxe_A0605 OsmC-like protein; OsmC family protein 3773652..3774074 Burkholderia phytofirmans PsJN 6282126 YP_001896971.1 CDS Bphyt_3356 NC_010681.1 3774694 3775521 R KEGG: bxe:Bxe_A0603 hypothetical protein; hypothetical protein complement(3774694..3775521) Burkholderia phytofirmans PsJN 6282127 YP_001896972.1 CDS Bphyt_3357 NC_010681.1 3775534 3776595 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(3775534..3776595) Burkholderia phytofirmans PsJN 6283956 YP_001896973.1 CDS Bphyt_3358 NC_010681.1 3776762 3777697 D PFAM: glutamine amidotransferase class-II; KEGG: bxe:Bxe_A0601 glutatmine aminotransferase; glutamine amidotransferase 3776762..3777697 Burkholderia phytofirmans PsJN 6283957 YP_001896974.1 CDS Bphyt_3359 NC_010681.1 3777817 3778542 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A0600 ABC His/Glu/Gln/Arg/opine family transporter ATPase; ABC transporter complement(3777817..3778542) Burkholderia phytofirmans PsJN 6283958 YP_001896975.1 CDS Bphyt_3360 NC_010681.1 3778539 3779216 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0599 ABC His/Glu/Gln/Arg/opine family transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(3778539..3779216) Burkholderia phytofirmans PsJN 6283959 YP_001896976.1 CDS Bphyt_3361 NC_010681.1 3779216 3779956 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0598 ABC His/Glu/Gln/Arg/opine family transporter inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(3779216..3779956) Burkholderia phytofirmans PsJN 6283960 YP_001896977.1 CDS Bphyt_3362 NC_010681.1 3780039 3780932 R PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A0597 ABC glutamate/aspartate transporter periplasmic ligand binding protein; family 3 extracellular solute-binding protein complement(3780039..3780932) Burkholderia phytofirmans PsJN 6283961 YP_001896978.1 CDS Bphyt_3363 NC_010681.1 3781218 3782531 R PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: bxe:Bxe_A0596 Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase complement(3781218..3782531) Burkholderia phytofirmans PsJN 6281306 YP_001896979.1 CDS Bphyt_3364 NC_010681.1 3782671 3783627 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A0595 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3782671..3783627) Burkholderia phytofirmans PsJN 6281307 YP_001896980.1 CDS Bphyt_3365 NC_010681.1 3783618 3783848 R hypothetical protein complement(3783618..3783848) Burkholderia phytofirmans PsJN 6281308 YP_001896981.1 CDS Bphyt_3366 NC_010681.1 3784070 3785458 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 3784070..3785458 Burkholderia phytofirmans PsJN 6281309 YP_001896982.1 CDS Bphyt_3367 NC_010681.1 3785548 3786045 R KEGG: bxe:Bxe_A0592 carbohydrate kinase, thermoresistant glucokinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase complement(3785548..3786045) Burkholderia phytofirmans PsJN 6281310 YP_001896983.1 CDS Bphyt_3368 NC_010681.1 3786056 3787453 R TIGRFAM: gluconate transporter; PFAM: gluconate transporter; citrate transporter; KEGG: bxe:Bxe_A0591 Na+/gluconate symporter, GntP; gluconate transporter complement(3786056..3787453) Burkholderia phytofirmans PsJN 6281311 YP_001896984.1 CDS Bphyt_3369 NC_010681.1 3787713 3788354 R KEGG: bxe:Bxe_A0590 KDPG and KHG aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(3787713..3788354) Burkholderia phytofirmans PsJN 6281312 YP_001896985.1 CDS Bphyt_3370 NC_010681.1 3788380 3790284 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(3788380..3790284) Burkholderia phytofirmans PsJN 6284307 YP_001896986.1 CDS Bphyt_3371 NC_010681.1 3790581 3791426 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bxe:Bxe_A0588 RpiR family transcriptional regulator; RpiR family transcriptional regulator 3790581..3791426 Burkholderia phytofirmans PsJN 6284308 YP_001896987.1 CDS Bphyt_3372 NC_010681.1 3791499 3792299 R PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_A0587 outer membrane protein, OmpA family; OmpA/MotB domain-containing protein complement(3791499..3792299) Burkholderia phytofirmans PsJN 6284309 YP_001896988.1 CDS Bphyt_3373 NC_010681.1 3792381 3803288 R PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bxe:Bxe_A0586 membrane-anchored cell surface protein, haemagluttinin; YadA domain-containing protein complement(3792381..3803288) Burkholderia phytofirmans PsJN 6284310 YP_001896989.1 CDS Bphyt_3374 NC_010681.1 3803676 3804116 D KEGG: bxe:Bxe_A0582 hypothetical protein; hypothetical protein 3803676..3804116 Burkholderia phytofirmans PsJN 6284311 YP_001896990.1 CDS Bphyt_3375 NC_010681.1 3804536 3804973 R KEGG: bxe:Bxe_A0581 hypothetical protein; hypothetical protein complement(3804536..3804973) Burkholderia phytofirmans PsJN 6284312 YP_001896991.1 CDS Bphyt_3376 NC_010681.1 3805378 3805794 R PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A0580 hypothetical protein; hypothetical protein complement(3805378..3805794) Burkholderia phytofirmans PsJN 6284313 YP_001896992.1 CDS proA NC_010681.1 3805810 3807081 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(3805810..3807081) Burkholderia phytofirmans PsJN 6281622 YP_001896993.1 CDS holA NC_010681.1 3807314 3808432 R required for the assembly and function of the DNAX complex which is required for the assembly of the subunit beta onto primed DNA; DNA polymerase III subunit delta complement(3807314..3808432) Burkholderia phytofirmans PsJN 6281623 YP_001896994.1 CDS Bphyt_3379 NC_010681.1 3808487 3809038 R KEGG: bxe:Bxe_A0577 rare lipoprotein B; rare lipoprotein B complement(3808487..3809038) Burkholderia phytofirmans PsJN 6281624 YP_001896995.1 CDS leuS NC_010681.1 3809130 3811964 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(3809130..3811964) Burkholderia phytofirmans PsJN 6281625 YP_001896996.1 CDS Bphyt_3381 NC_010681.1 3811995 3812426 R PFAM: biopolymertransporter ExbD/TolR; KEGG: bxe:Bxe_A0575 biopolymer transporter ExbD/TolR; biopolymertransporter ExbD/TolR complement(3811995..3812426) Burkholderia phytofirmans PsJN 6281626 YP_001896997.1 CDS Bphyt_3382 NC_010681.1 3812451 3813167 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A0574 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel complement(3812451..3813167) Burkholderia phytofirmans PsJN 6281627 YP_001896998.1 CDS Bphyt_3383 NC_010681.1 3813244 3814008 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(3813244..3814008) Burkholderia phytofirmans PsJN 6281628 YP_001896999.1 CDS Bphyt_3384 NC_010681.1 3814205 3815035 R PFAM: SmpA/OmlA domain protein; KEGG: bxe:Bxe_A0572 outer membrane lipoprotein; SmpA/OmlA domain-containing protein complement(3814205..3815035) Burkholderia phytofirmans PsJN 6284650 YP_001897000.1 CDS Bphyt_3385 NC_010681.1 3815194 3815622 D PFAM: ferric-uptake regulator; KEGG: bxe:Bxe_A0571 ferric uptake regulator (FUR) family; Fur family ferric uptake regulator 3815194..3815622 Burkholderia phytofirmans PsJN 6284651 YP_001897001.1 CDS Bphyt_3386 NC_010681.1 3815741 3816253 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(3815741..3816253) Burkholderia phytofirmans PsJN 6284652 YP_001897002.1 CDS Bphyt_3387 NC_010681.1 3816267 3817277 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(3816267..3817277) Burkholderia phytofirmans PsJN 6284653 YP_001897003.1 CDS Bphyt_3388 NC_010681.1 3817391 3818716 R involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA complement(3817391..3818716) Burkholderia phytofirmans PsJN 6284654 YP_001897004.1 CDS Bphyt_3389 NC_010681.1 3818946 3819638 D PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_A0567 GntR family transcriptional regulator; GntR family transcriptional regulator 3818946..3819638 Burkholderia phytofirmans PsJN 6284655 YP_001897005.1 CDS Bphyt_3390 NC_010681.1 3819755 3820765 R KEGG: bxe:Bxe_A0566 glyceraldehyde-3-phosphate dehydrogenase, typeI; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(3819755..3820765) Burkholderia phytofirmans PsJN 6283702 YP_001897006.1 CDS Bphyt_3391 NC_010681.1 3820861 3822960 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(3820861..3822960) Burkholderia phytofirmans PsJN 6283703 YP_001897007.1 CDS Bphyt_3392 NC_010681.1 3823161 3824033 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3823161..3824033 Burkholderia phytofirmans PsJN 6283704 YP_001897008.1 CDS Bphyt_3393 NC_010681.1 3824148 3824561 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A0562 glyoxalase/bleomycin resistance protein, dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase 3824148..3824561 Burkholderia phytofirmans PsJN 6283705 YP_001897009.2 CDS Bphyt_3394 NC_010681.1 3824566 3825321 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3824566..3825321 Burkholderia phytofirmans PsJN 6283706 YP_001897010.1 CDS Bphyt_3395 NC_010681.1 3825457 3826017 R PFAM: Barstar (barnase inhibitor); KEGG: bxe:Bxe_A0560 hypothetical protein; barnase inhibitor complement(3825457..3826017) Burkholderia phytofirmans PsJN 6283707 YP_001897011.1 CDS Bphyt_3396 NC_010681.1 3826034 3826450 R PFAM: guanine-specific ribonuclease N1 and T1; KEGG: bxe:Bxe_A0559 guanyl-specific ribonuclease signal peptide protein; guanine-specific ribonuclease N1 and T1 complement(3826034..3826450) Burkholderia phytofirmans PsJN 6283708 YP_001897012.1 CDS Bphyt_3398 NC_010681.1 3827324 3828124 D PFAM: integrase; KEGG: pol:Bpro_3089 integrase, catalytic region; integrase 3827324..3828124 Burkholderia phytofirmans PsJN 6282726 YP_001897013.1 CDS Bphyt_3399 NC_010681.1 3828208 3830547 R catalyzes the oxidative decarboxylation of malate to form pyruvate; malic enzyme complement(3828208..3830547) Burkholderia phytofirmans PsJN 6282727 YP_001897014.1 CDS Bphyt_3400 NC_010681.1 3830779 3831777 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 3830779..3831777 Burkholderia phytofirmans PsJN 6282728 YP_001897015.1 CDS Bphyt_3401 NC_010681.1 3831767 3832348 D PFAM: phosphatidylglycerophosphatase A; KEGG: bxe:Bxe_A0555 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 3831767..3832348 Burkholderia phytofirmans PsJN 6282729 YP_001897016.1 CDS Bphyt_3402 NC_010681.1 3832415 3832915 D PFAM: damage inducible protein CinA; KEGG: bxe:Bxe_A0554 competence-damaged protein, CinA-like; damage inducible protein CinA 3832415..3832915 Burkholderia phytofirmans PsJN 6282730 YP_001897017.1 CDS Bphyt_3403 NC_010681.1 3832939 3833457 D PFAM: protein of unknown function DUF985; KEGG: bxe:Bxe_A0553 hypothetical protein; hypothetical protein 3832939..3833457 Burkholderia phytofirmans PsJN 6282731 YP_001897018.1 CDS pyrF NC_010681.1 3833588 3834403 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(3833588..3834403) Burkholderia phytofirmans PsJN 6282559 YP_001897019.1 CDS Bphyt_3405 NC_010681.1 3834651 3835712 R PFAM: aldose 1-epimerase; KEGG: bxe:Bxe_A0551 aldose-1-epimerase; aldose 1-epimerase complement(3834651..3835712) Burkholderia phytofirmans PsJN 6282560 YP_001897020.1 CDS Bphyt_3406 NC_010681.1 3835780 3835911 R hypothetical protein complement(3835780..3835911) Burkholderia phytofirmans PsJN 6282561 YP_001897021.1 CDS Bphyt_3407 NC_010681.1 3835946 3836848 R PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_A0550 regucalcin family protein; SMP-30/gluconolaconase/LRE domain-containing protein complement(3835946..3836848) Burkholderia phytofirmans PsJN 6282562 YP_001897022.1 CDS Bphyt_3408 NC_010681.1 3836845 3837645 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A0549 short-chain dehydrogenase/reductase, FabG-like; short-chain dehydrogenase/reductase SDR complement(3836845..3837645) Burkholderia phytofirmans PsJN 6282563 YP_001897023.1 CDS araH NC_010681.1 3837685 3838701 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease complement(3837685..3838701) Burkholderia phytofirmans PsJN 6282564 YP_001897024.1 CDS araG NC_010681.1 3838756 3840294 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein complement(3838756..3840294) Burkholderia phytofirmans PsJN 6281601 YP_001897025.1 CDS Bphyt_3411 NC_010681.1 3840428 3841426 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A0546 ABC sugar(arabinose) transporter periplasmic ligand binding protein; sugar ABC transporter ATPase complement(3840428..3841426) Burkholderia phytofirmans PsJN 6281602 YP_001897026.1 CDS Bphyt_3412 NC_010681.1 3841557 3842333 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A0545 short chain dehydrogenase; short chain dehydrogenase complement(3841557..3842333) Burkholderia phytofirmans PsJN 6281603 YP_001897027.1 CDS Bphyt_3413 NC_010681.1 3842330 3843010 R catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(3842330..3843010) Burkholderia phytofirmans PsJN 6281604 YP_001897028.1 CDS Bphyt_3414 NC_010681.1 3843047 3844099 R PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bxe:Bxe_A0543 2-dehydro-3-deoxygalactonate kinase, DgoK-like; 2-keto-3-deoxy-galactonokinase complement(3843047..3844099) Burkholderia phytofirmans PsJN 6281605 YP_001897029.1 CDS Bphyt_3415 NC_010681.1 3844096 3845088 R PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: bxe:Bxe_A0542 IclR family transcriptional regulator; IclR family transcriptional regulator complement(3844096..3845088) Burkholderia phytofirmans PsJN 6281606 YP_001897030.1 CDS Bphyt_3416 NC_010681.1 3846186 3846638 D KEGG: bxe:Bxe_A3642 hypothetical protein; hypothetical protein 3846186..3846638 Burkholderia phytofirmans PsJN 6281607 YP_001897031.1 CDS Bphyt_3417 NC_010681.1 3847038 3848315 D PFAM: transposase mutator type; KEGG: bcm:Bcenmc03_6788 transposase mutator type; transposase mutator type 3847038..3848315 Burkholderia phytofirmans PsJN 6282359 YP_001897032.1 CDS mtgA NC_010681.1 3848460 3849182 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(3848460..3849182) Burkholderia phytofirmans PsJN 6282360 YP_001897033.1 CDS aroE NC_010681.1 3849231 3850094 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3849231..3850094) Burkholderia phytofirmans PsJN 6282361 YP_001897034.1 CDS Bphyt_3420 NC_010681.1 3850091 3852208 R PFAM: ribonuclease II; KEGG: bxe:Bxe_A0538 ribonuclease II; ribonuclease II complement(3850091..3852208) Burkholderia phytofirmans PsJN 6282362 YP_001897035.1 CDS Bphyt_3421 NC_010681.1 3852415 3853017 R PFAM: protein of unknown function UPF0227; KEGG: bxe:Bxe_A0537 predicted esterase; hypothetical protein complement(3852415..3853017) Burkholderia phytofirmans PsJN 6282363 YP_001897036.1 CDS Bphyt_3422 NC_010681.1 3853014 3854408 R TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: bxe:Bxe_A0536 UDP-N-acetylmuramate/L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase, MurC; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(3853014..3854408) Burkholderia phytofirmans PsJN 6282364 YP_001897037.1 CDS Bphyt_3423 NC_010681.1 3854687 3855340 D KEGG: bxe:Bxe_A0535 hypothetical protein; hypothetical protein 3854687..3855340 Burkholderia phytofirmans PsJN 6282365 YP_001897038.1 CDS Bphyt_3424 NC_010681.1 3855351 3855902 D PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bxe:Bxe_A0534 thioredoxin; redoxin 3855351..3855902 Burkholderia phytofirmans PsJN 6281840 YP_001897039.1 CDS Bphyt_3425 NC_010681.1 3856097 3856552 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3856097..3856552 Burkholderia phytofirmans PsJN 6281841 YP_001897040.1 CDS Bphyt_3426 NC_010681.1 3856620 3857090 D composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3856620..3857090 Burkholderia phytofirmans PsJN 6281842 YP_001897041.1 CDS Bphyt_3427 NC_010681.1 3857221 3858588 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 3857221..3858588 Burkholderia phytofirmans PsJN 6281843 YP_001897042.1 CDS prmA NC_010681.1 3858592 3859494 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 3858592..3859494 Burkholderia phytofirmans PsJN 6281844 YP_001897043.1 CDS Bphyt_3429 NC_010681.1 3859543 3860943 D TIGRFAM: MJ0042 family finger-like protein; KEGG: bxe:Bxe_A0529 membrane protein; hypothetical protein 3859543..3860943 Burkholderia phytofirmans PsJN 6281845 YP_001897044.1 CDS Bphyt_3430 NC_010681.1 3861017 3861517 D PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bxe:Bxe_A0528 thiol peroxidase TPX; redoxin 3861017..3861517 Burkholderia phytofirmans PsJN 6282531 YP_001897045.1 CDS Bphyt_3431 NC_010681.1 3861612 3862550 D PFAM: PfkB domain protein; KEGG: bxe:Bxe_A0527 sugar kinase transferase, PfkB; PfkB domain-containing protein 3861612..3862550 Burkholderia phytofirmans PsJN 6282532 YP_001897046.1 CDS Bphyt_3432 NC_010681.1 3862577 3863053 D PFAM: 17 kDa surface antigen; KEGG: bxe:Bxe_A0526 outer membrane lipoprotein, SlyB-like; 17 kDa surface antigen 3862577..3863053 Burkholderia phytofirmans PsJN 6282533 YP_001897047.1 CDS Bphyt_3433 NC_010681.1 3863302 3863919 R KEGG: bxe:Bxe_A0525 histone H1-like protein; histone H1-like protein complement(3863302..3863919) Burkholderia phytofirmans PsJN 6282534 YP_001897048.1 CDS Bphyt_3434 NC_010681.1 3863950 3864276 R KEGG: bxe:Bxe_A0524 hypothetical protein; hypothetical protein complement(3863950..3864276) Burkholderia phytofirmans PsJN 6282535 YP_001897049.1 CDS Bphyt_3435 NC_010681.1 3864363 3865610 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(3864363..3865610) Burkholderia phytofirmans PsJN 6282536 YP_001897050.1 CDS Bphyt_3436 NC_010681.1 3866297 3869302 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(3866297..3869302) Burkholderia phytofirmans PsJN 6282537 YP_001897051.1 CDS Bphyt_3437 NC_010681.1 3869854 3870450 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: bxe:Bxe_A0519 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase complement(3869854..3870450) Burkholderia phytofirmans PsJN 6284246 YP_001897052.1 CDS Bphyt_3438 NC_010681.1 3870447 3870770 R KEGG: bxe:Bxe_A0518 hypothetical protein; hypothetical protein complement(3870447..3870770) Burkholderia phytofirmans PsJN 6284247 YP_001897053.1 CDS Bphyt_3439 NC_010681.1 3870780 3871709 R PFAM: cytochrome C assembly protein; KEGG: bxe:Bxe_A0517 cytochrome C assembly protein; cytochrome C assembly protein complement(3870780..3871709) Burkholderia phytofirmans PsJN 6284248 YP_001897054.1 CDS Bphyt_3440 NC_010681.1 3871791 3873158 D KEGG: bxe:Bxe_A0516 signal recognition particle GTPase, Ffh; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA; signal recognition particle protein 3871791..3873158 Burkholderia phytofirmans PsJN 6284249 YP_001897055.1 CDS Bphyt_3441 NC_010681.1 3873313 3873864 D Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 3873313..3873864 Burkholderia phytofirmans PsJN 6284250 YP_001897056.1 CDS Bphyt_3442 NC_010681.1 3874052 3874651 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bxe:Bxe_A0514 multiple antibiotic resistance (MarC)-related protein, transporter; multiple antibiotic resistance (MarC)-like protein complement(3874052..3874651) Burkholderia phytofirmans PsJN 6284251 YP_001897057.1 CDS Bphyt_3443 NC_010681.1 3874664 3876400 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3874664..3876400) Burkholderia phytofirmans PsJN 6284252 YP_001897058.1 CDS Bphyt_3444 NC_010681.1 3876715 3877455 D PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A0512 (di)nucleoside polyphosphate hydrolase; NUDIX hydrolase 3876715..3877455 Burkholderia phytofirmans PsJN 6283950 YP_001897059.1 CDS Bphyt_3445 NC_010681.1 3877533 3878090 D PFAM: protein of unknown function CNP1-like; KEGG: bxe:Bxe_A0511 lipoprotein; hypothetical protein 3877533..3878090 Burkholderia phytofirmans PsJN 6283951 YP_001897060.1 CDS Bphyt_3446 NC_010681.1 3878199 3879317 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(3878199..3879317) Burkholderia phytofirmans PsJN 6283952 YP_001897061.1 CDS obgE NC_010681.1 3879388 3880509 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(3879388..3880509) Burkholderia phytofirmans PsJN 6283953 YP_001897062.1 CDS rpmA NC_010681.1 3880753 3881016 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3880753..3881016) Burkholderia phytofirmans PsJN 6283954 YP_001897063.1 CDS rplU NC_010681.1 3881042 3881353 R PFAM: ribosomal protein L21; KEGG: bxe:Bxe_A0507 50S ribosomal protein L21; 50S ribosomal protein L21 complement(3881042..3881353) Burkholderia phytofirmans PsJN 6283955 YP_001897064.1 CDS Bphyt_3450 NC_010681.1 3881581 3882573 D PFAM: polyprenyl synthetase; KEGG: bxe:Bxe_A0506 octylprenyl-diphosphate synthase; polyprenyl synthetase 3881581..3882573 Burkholderia phytofirmans PsJN 6281919 YP_001897065.1 CDS Bphyt_3451 NC_010681.1 3882978 3884189 D PFAM: hypothetical protein; protein of unknown function DUF21; transporter-associated region; KEGG: bxe:Bxe_A0505 Mg2+ and Co2+ transporter HlyC/CorC (HCC) family; hypothetical protein 3882978..3884189 Burkholderia phytofirmans PsJN 6281921 YP_001897066.1 CDS Bphyt_3452 NC_010681.1 3884448 3885743 D PFAM: type II secretion system protein E; KEGG: bxe:Bxe_A0504 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; type II secretion system protein E 3884448..3885743 Burkholderia phytofirmans PsJN 6281922 YP_001897067.1 CDS Bphyt_3453 NC_010681.1 3885740 3886969 D PFAM: type II secretion system protein; KEGG: bxe:Bxe_A0503 type II secretion system, subunit F / type IV pilus assembly protein TapC/PilC; type II secretion system protein 3885740..3886969 Burkholderia phytofirmans PsJN 6281923 YP_001897068.1 CDS Bphyt_3454 NC_010681.1 3887017 3887937 D PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: bxe:Bxe_A0502 type 4 prepilin-like peptidase, leader peptide processing enzyme; prepilin peptidase 3887017..3887937 Burkholderia phytofirmans PsJN 6281924 YP_001897069.1 CDS coaE NC_010681.1 3887941 3888543 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3887941..3888543 Burkholderia phytofirmans PsJN 6284765 YP_001897070.1 CDS Bphyt_3456 NC_010681.1 3888738 3889493 D PFAM: protein of unknown function DUF1342; KEGG: bxe:Bxe_A0500 hypothetical protein; hypothetical protein 3888738..3889493 Burkholderia phytofirmans PsJN 6284766 YP_001897071.1 CDS Bphyt_3457 NC_010681.1 3889617 3889814 D PFAM: protein of unknown function DUF329; KEGG: bte:BTH_I1131 domain of unknown function (DUF329) superfamily; hypothetical protein 3889617..3889814 Burkholderia phytofirmans PsJN 6284767 YP_001897072.1 CDS Bphyt_3458 NC_010681.1 3889896 3890321 R TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A0498 mutator protein(7,8-dihydro-8-oxoguanine-triphosphatase), MutT; mutator MutT protein complement(3889896..3890321) Burkholderia phytofirmans PsJN 6284768 YP_001897073.1 CDS Bphyt_3459 NC_010681.1 3890330 3891220 R PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: bxe:Bxe_A0497 ATP/GTP-binding protein, ATPase AAA superfamily; hypothetical protein complement(3890330..3891220) Burkholderia phytofirmans PsJN 6284769 YP_001897074.1 CDS argJ NC_010681.1 3891254 3892495 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(3891254..3892495) Burkholderia phytofirmans PsJN 6284770 YP_001897075.1 CDS Bphyt_3461 NC_010681.1 3892645 3895455 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(3892645..3895455) Burkholderia phytofirmans PsJN 6284771 YP_001897076.1 CDS Bphyt_3462 NC_010681.1 3895678 3896232 D KEGG: bxe:Bxe_A0494 hypothetical protein; hypothetical protein 3895678..3896232 Burkholderia phytofirmans PsJN 6280853 YP_001897077.1 CDS lpxC NC_010681.1 3896303 3897220 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(3896303..3897220) Burkholderia phytofirmans PsJN 6280854 YP_001897078.1 CDS Bphyt_3464 NC_010681.1 3897510 3898013 R PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: bxe:Bxe_A0492 type 2 peroxiredoxin, AhpC/TSA family; redoxin complement(3897510..3898013) Burkholderia phytofirmans PsJN 6280855 YP_001897079.1 CDS Bphyt_3465 NC_010681.1 3898270 3899466 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(3898270..3899466) Burkholderia phytofirmans PsJN 6280856 YP_001897080.1 CDS Bphyt_3466 NC_010681.1 3899618 3900850 R PFAM: cell division protein FtsA; KEGG: bxe:Bxe_A0490 actin-like ATPase, cell division progression Z ring-localized protein, FtsA; cell division protein FtsA complement(3899618..3900850) Burkholderia phytofirmans PsJN 6280857 YP_001897081.1 CDS Bphyt_3467 NC_010681.1 3900878 3901630 R PFAM: cell division protein FtsQ; polypeptide-transport-associated domain protein FtsQ-type; KEGG: bxe:Bxe_A0489 cell division transmembrane protein, FtsQ; polypeptide-transport-associated domain-containing protein complement(3900878..3901630) Burkholderia phytofirmans PsJN 6280858 YP_001897082.1 CDS ddl NC_010681.1 3901679 3902620 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(3901679..3902620) Burkholderia phytofirmans PsJN 6282827 YP_001897083.1 CDS murC NC_010681.1 3902622 3904025 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(3902622..3904025) Burkholderia phytofirmans PsJN 6282828 YP_001897084.1 CDS murG NC_010681.1 3904022 3905140 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase complement(3904022..3905140) Burkholderia phytofirmans PsJN 6282829 YP_001897085.1 CDS Bphyt_3471 NC_010681.1 3905137 3906414 R TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: bxe:Bxe_A0485 cell division transmembrane protein, FtsW; cell division protein FtsW complement(3905137..3906414) Burkholderia phytofirmans PsJN 6282830 YP_001897086.1 CDS murD NC_010681.1 3906411 3907925 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3906411..3907925) Burkholderia phytofirmans PsJN 6282831 YP_001897087.1 CDS mraY NC_010681.1 3907952 3909121 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(3907952..3909121) Burkholderia phytofirmans PsJN 6282832 YP_001897088.1 CDS Bphyt_3474 NC_010681.1 3909139 3910566 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: bxe:Bxe_A0482 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D -alanyl ligase, cell division protein, MurF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(3909139..3910566) Burkholderia phytofirmans PsJN 6282833 YP_001897089.1 CDS murE NC_010681.1 3910563 3912110 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(3910563..3912110) Burkholderia phytofirmans PsJN 6284314 YP_001897090.1 CDS Bphyt_3476 NC_010681.1 3912107 3913972 R PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bxe:Bxe_A0480 penicillin binding transmembrane protein, cell division protein, FtsI/PenA; peptidoglycan glycosyltransferase complement(3912107..3913972) Burkholderia phytofirmans PsJN 6284315 YP_001897091.1 CDS Bphyt_3477 NC_010681.1 3913969 3914319 R PFAM: cell division protein FtsL; KEGG: bxe:Bxe_A0479 cell division transmembrane protein, FtsL; cell division protein FtsL complement(3913969..3914319) Burkholderia phytofirmans PsJN 6284316 YP_001897092.1 CDS mraW NC_010681.1 3914316 3915269 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: bxe:Bxe_A0478 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(3914316..3915269) Burkholderia phytofirmans PsJN 6284317 YP_001897093.1 CDS Bphyt_3479 NC_010681.1 3915285 3915713 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(3915285..3915713) Burkholderia phytofirmans PsJN 6284318 YP_001897094.1 CDS Bphyt_3480 NC_010681.1 3916126 3916764 R KEGG: bxe:Bxe_A0476 hypothetical protein; hypothetical protein complement(3916126..3916764) Burkholderia phytofirmans PsJN 6284319 YP_001897095.1 CDS Bphyt_3481 NC_010681.1 3917068 3918237 D PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A0475 outer membrane protein (porin); porin 3917068..3918237 Burkholderia phytofirmans PsJN 6284320 YP_001897096.1 CDS Bphyt_3482 NC_010681.1 3918430 3920103 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(3918430..3920103) Burkholderia phytofirmans PsJN 6281247 YP_001897097.1 CDS Bphyt_3483 NC_010681.1 3920250 3922328 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bxe:Bxe_A0473 molybdopterin oxidoreductase; molybdopterin oxidoreductase complement(3920250..3922328) Burkholderia phytofirmans PsJN 6281248 YP_001897098.1 CDS Bphyt_3484 NC_010681.1 3922516 3923712 D KEGG: bxe:Bxe_A0472 hippurate carboxypeptidase, M20D-type; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3922516..3923712 Burkholderia phytofirmans PsJN 6281249 YP_001897099.1 CDS Bphyt_3485 NC_010681.1 3929792 3930568 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(3929792..3930568) Burkholderia phytofirmans PsJN 6284150 YP_001897100.1 CDS Bphyt_3486 NC_010681.1 3930706 3932406 D TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: aldehyde dehydrogenase_; KEGG: bxe:Bxe_A0470 phenylacetic acid ring-opening protein (PaaZ'); phenylacetic acid degradation protein paaN 3930706..3932406 Burkholderia phytofirmans PsJN 6282638 YP_001897101.1 CDS Bphyt_3487 NC_010681.1 3932532 3933734 D catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 3932532..3933734 Burkholderia phytofirmans PsJN 6282639 YP_001897102.1 CDS Bphyt_3488 NC_010681.1 3933785 3934576 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3933785..3934576 Burkholderia phytofirmans PsJN 6282640 YP_001897103.1 CDS Bphyt_3489 NC_010681.1 3934579 3935040 D TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A0467 phenylacetic acid degradation-related thioesterase (PaaI); phenylacetic acid degradation protein PaaD 3934579..3935040 Burkholderia phytofirmans PsJN 6282641 YP_001897104.1 CDS Bphyt_3490 NC_010681.1 3935191 3936495 D TIGRFAM: phenylacetate-CoA ligase; KEGG: bxe:Bxe_A0466 phenylacetyl-CoA ligase (PaaK); phenylacetate-CoA ligase 3935191..3936495 Burkholderia phytofirmans PsJN 6282642 YP_001897105.1 CDS Bphyt_3491 NC_010681.1 3936673 3937797 R PFAM: MltA domain protein; 3D domain protein; KEGG: bxe:Bxe_A0465 membrane-bound lytic murein transglycosylase A; MltA domain-containing protein complement(3936673..3937797) Burkholderia phytofirmans PsJN 6282643 YP_001897106.1 CDS Bphyt_3492 NC_010681.1 3937826 3937987 D KEGG: rso:RSc2877 probable transmembrane protein; hypothetical protein 3937826..3937987 Burkholderia phytofirmans PsJN 6283315 YP_001897107.1 CDS apaG NC_010681.1 3938045 3938419 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(3938045..3938419) Burkholderia phytofirmans PsJN 6283316 YP_001897108.1 CDS Bphyt_3494 NC_010681.1 3938667 3939383 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 3938667..3939383 Burkholderia phytofirmans PsJN 6283317 YP_001897109.1 CDS Bphyt_3495 NC_010681.1 3939398 3940114 D TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: bxe:Bxe_A0462 2-phosphoglycolate phosphatase; phosphoglycolate phosphatase 3939398..3940114 Burkholderia phytofirmans PsJN 6283318 YP_001897110.1 CDS Bphyt_3496 NC_010681.1 3940484 3941977 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 3940484..3941977 Burkholderia phytofirmans PsJN 6283319 YP_001897111.1 CDS Bphyt_3497 NC_010681.1 3941991 3942593 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 3941991..3942593 Burkholderia phytofirmans PsJN 6283320 YP_001897112.1 CDS trpD NC_010681.1 3942593 3943642 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 3942593..3943642 Burkholderia phytofirmans PsJN 6283321 YP_001897113.1 CDS trpC NC_010681.1 3943673 3944458 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Indole-3-glycerol phosphate synthase 3943673..3944458 Burkholderia phytofirmans PsJN 6284484 YP_001897114.1 CDS Bphyt_3500 NC_010681.1 3944505 3945131 D PFAM: adenylate cyclase; KEGG: bxe:Bxe_A0457 predicted adenylyl cyclase 2, CyaB/UgiF-like; adenylate cyclase 3944505..3945131 Burkholderia phytofirmans PsJN 6284485 YP_001897115.1 CDS Bphyt_3501 NC_010681.1 3945300 3946061 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3945300..3946061 Burkholderia phytofirmans PsJN 6284486 YP_001897116.1 CDS Bphyt_3502 NC_010681.1 3946190 3946786 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bxe:Bxe_A0455 (acyl-carrier protein) phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(3946190..3946786) Burkholderia phytofirmans PsJN 6284487 YP_001897117.1 CDS Bphyt_3503 NC_010681.1 3946941 3948731 R PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: bxe:Bxe_A0454 metalloprotease zinc binding; peptidase M61 domain-containing protein complement(3946941..3948731) Burkholderia phytofirmans PsJN 6284488 YP_001897118.1 CDS Bphyt_3504 NC_010681.1 3948826 3949551 R KEGG: bxe:Bxe_A0453 thiol-disulfide interchange protein, DsbC; thiol-disulfide interchange protein DsbC complement(3948826..3949551) Burkholderia phytofirmans PsJN 6284489 YP_001897119.1 CDS Bphyt_3505 NC_010681.1 3949679 3950851 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_A0452 hypothetical protein; ubiquinone biosynthesis hydroxylase family protein complement(3949679..3950851) Burkholderia phytofirmans PsJN 6282185 YP_001897120.1 CDS Bphyt_3506 NC_010681.1 3950954 3951319 R hypothetical protein complement(3950954..3951319) Burkholderia phytofirmans PsJN 6282186 YP_001897121.1 CDS Bphyt_3507 NC_010681.1 3951636 3952730 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3951636..3952730 Burkholderia phytofirmans PsJN 6282187 YP_001897122.1 CDS Bphyt_3508 NC_010681.1 3952827 3953804 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bxe:Bxe_A0449 glycerophosphoryl diester phosphodiesterase, UgpQ; glycerophosphoryl diester phosphodiesterase complement(3952827..3953804) Burkholderia phytofirmans PsJN 6282188 YP_001897123.1 CDS Bphyt_3509 NC_010681.1 3954113 3955438 D with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 3954113..3955438 Burkholderia phytofirmans PsJN 6282189 YP_001897124.1 CDS Bphyt_3510 NC_010681.1 3955508 3956392 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0447 ABC sugar transporter inner membrane subunit; binding-protein-dependent transport system inner membrane protein 3955508..3956392 Burkholderia phytofirmans PsJN 6282190 YP_001897125.1 CDS Bphyt_3511 NC_010681.1 3956389 3957234 D with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 3956389..3957234 Burkholderia phytofirmans PsJN 6282191 YP_001897126.1 CDS ugpC NC_010681.1 3957326 3958414 D part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 3957326..3958414 Burkholderia phytofirmans PsJN 6283458 YP_001897127.1 CDS Bphyt_3513 NC_010681.1 3958464 3958763 D KEGG: bxe:Bxe_A0444 hypothetical protein; hypothetical protein 3958464..3958763 Burkholderia phytofirmans PsJN 6283459 YP_001897128.1 CDS Bphyt_3514 NC_010681.1 3958997 3960661 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 3958997..3960661 Burkholderia phytofirmans PsJN 6283460 YP_001897129.1 CDS Bphyt_3515 NC_010681.1 3960714 3960836 D hypothetical protein 3960714..3960836 Burkholderia phytofirmans PsJN 6283461 YP_001897130.1 CDS Bphyt_3516 NC_010681.1 3960969 3962090 D KEGG: bxe:Bxe_A0442 hypothetical protein; hypothetical protein 3960969..3962090 Burkholderia phytofirmans PsJN 6283462 YP_001897131.1 CDS Bphyt_3517 NC_010681.1 3962112 3962735 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: bxe:Bxe_A0441 L-2-haloalkanoic acid dehalogenase (HAD aspartate-nucleophile hydrolase); HAD family hydrolase complement(3962112..3962735) Burkholderia phytofirmans PsJN 6283463 YP_001897132.1 CDS Bphyt_3518 NC_010681.1 3962767 3964581 R PFAM: creatinase; peptidase M24; KEGG: bxe:Bxe_A0440 Xaa-Pro aminopeptidase; peptidase M24 complement(3962767..3964581) Burkholderia phytofirmans PsJN 6283464 YP_001897133.1 CDS Bphyt_3519 NC_010681.1 3964601 3964855 R KEGG: bxe:Bxe_A0439 hypothetical protein; hypothetical protein complement(3964601..3964855) Burkholderia phytofirmans PsJN 6282847 YP_001897134.1 CDS Bphyt_3520 NC_010681.1 3965060 3965770 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0438 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 3965060..3965770 Burkholderia phytofirmans PsJN 6282848 YP_001897135.1 CDS hemA NC_010681.1 3965834 3967120 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 3965834..3967120 Burkholderia phytofirmans PsJN 6282849 YP_001897136.1 CDS prfA NC_010681.1 3967244 3968326 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3967244..3968326 Burkholderia phytofirmans PsJN 6282850 YP_001897137.1 CDS Bphyt_3523 NC_010681.1 3968334 3969194 D TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: bxe:Bxe_A0435 modification methylase HemK; protein-(glutamine-N5) methyltransferase 3968334..3969194 Burkholderia phytofirmans PsJN 6282851 YP_001897138.1 CDS Bphyt_3524 NC_010681.1 3969313 3969624 D TIGRFAM: glutaredoxin; PFAM: glutaredoxin; KEGG: bxe:Bxe_A0434 glutaredoxin-related protein; glutaredoxin 3969313..3969624 Burkholderia phytofirmans PsJN 6282852 YP_001897139.1 CDS Bphyt_3525 NC_010681.1 3969668 3970267 D catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3969668..3970267 Burkholderia phytofirmans PsJN 6280908 YP_001897140.1 CDS Bphyt_3526 NC_010681.1 3970428 3971213 D PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bxe:Bxe_A0432 4,5-extradiol aromatic ring fission dioxygenase, DodA/LigB-like; extradiol ring-cleavage dioxygenase class III protein subunit B 3970428..3971213 Burkholderia phytofirmans PsJN 6280909 YP_001897141.1 CDS Bphyt_3527 NC_010681.1 3971301 3972968 R PFAM: amino acid permease-associated region; KEGG: bxe:Bxe_A0431 amino acid-polyamine-organocation (APC) superfamily transporter; amino acid permease-associated protein complement(3971301..3972968) Burkholderia phytofirmans PsJN 6280910 YP_001897142.1 CDS Bphyt_3528 NC_010681.1 3973378 3973581 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_A0430 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 3973378..3973581 Burkholderia phytofirmans PsJN 6280911 YP_001897143.1 CDS Bphyt_3529 NC_010681.1 3973693 3974943 R KEGG: bxe:Bxe_A0429 chaperone; chaperone complement(3973693..3974943) Burkholderia phytofirmans PsJN 6280912 YP_001897144.1 CDS Bphyt_3530 NC_010681.1 3975133 3976608 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0428 major facilitator superfamily (MFS) sugar transporter; major facilitator superfamily protein 3975133..3976608 Burkholderia phytofirmans PsJN 6280913 YP_001897145.1 CDS Bphyt_3531 NC_010681.1 3976666 3977259 R PFAM: nitroreductase; KEGG: bxe:Bxe_A0427 oxidoreductase, nitroreductase family; nitroreductase complement(3976666..3977259) Burkholderia phytofirmans PsJN 6280914 YP_001897146.1 CDS Bphyt_3532 NC_010681.1 3977486 3978769 R PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0426 major facilitator superfamily (MFS) transporter monocarboxylates; major facilitator superfamily protein complement(3977486..3978769) Burkholderia phytofirmans PsJN 6282524 YP_001897147.1 CDS Bphyt_3533 NC_010681.1 3978925 3979560 D PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A0425 TetR family transcriptional regulator; TetR family transcriptional regulator 3978925..3979560 Burkholderia phytofirmans PsJN 6282525 YP_001897148.1 CDS Bphyt_3534 NC_010681.1 3979650 3980234 D PFAM: protein of unknown function DUF1415; KEGG: bxe:Bxe_A0424 hypothetical protein; hypothetical protein 3979650..3980234 Burkholderia phytofirmans PsJN 6282526 YP_001897149.1 CDS Bphyt_3535 NC_010681.1 3980280 3981122 R KEGG: bxe:Bxe_A0423 hypothetical protein; hypothetical protein complement(3980280..3981122) Burkholderia phytofirmans PsJN 6282527 YP_001897150.1 CDS Bphyt_3536 NC_010681.1 3981505 3981825 D KEGG: bxe:Bxe_A0422 hypothetical protein; hypothetical protein 3981505..3981825 Burkholderia phytofirmans PsJN 6282528 YP_001897151.1 CDS Bphyt_3537 NC_010681.1 3981915 3982124 R KEGG: bxe:Bxe_A0421 hypothetical protein; hypothetical protein complement(3981915..3982124) Burkholderia phytofirmans PsJN 6282529 YP_001897152.1 CDS Bphyt_3538 NC_010681.1 3982506 3983771 D PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_A0420 transmembrane protein, NAD(FAD)-binding; hypothetical protein 3982506..3983771 Burkholderia phytofirmans PsJN 6282530 YP_001897153.1 CDS Bphyt_3539 NC_010681.1 3983822 3984946 R PFAM: methyltransferase small; KEGG: bxe:Bxe_A0419 hypothetical protein; methyltransferase small complement(3983822..3984946) Burkholderia phytofirmans PsJN 6282923 YP_001897154.1 CDS Bphyt_3540 NC_010681.1 3985435 3985944 R PFAM: stringent starvation protein B; KEGG: bxe:Bxe_A0418 ClpXP protease specificity-enhancing factor; ClpXP protease specificity-enhancing factor complement(3985435..3985944) Burkholderia phytofirmans PsJN 6282925 YP_001897155.1 CDS Bphyt_3541 NC_010681.1 3986015 3986626 R PFAM: glutathione S-transferase; KEGG: bxe:Bxe_A0417 stringent starvation protein A, SspA; glutathione S-transferase complement(3986015..3986626) Burkholderia phytofirmans PsJN 6282926 YP_001897156.1 CDS Bphyt_3542 NC_010681.1 3986722 3987477 R PFAM: cytochrome C1; KEGG: bxe:Bxe_A0416 cytochrome C1 transmembrane protein; cytochrome C1 complement(3986722..3987477) Burkholderia phytofirmans PsJN 6282927 YP_001897157.1 CDS Bphyt_3543 NC_010681.1 3987499 3988878 R PFAM: cytochrome b/b6 domain; KEGG: bxe:Bxe_A0415 cytochrome b subunit transmembrane protein; cytochrome b/b6 domain complement(3987499..3988878) Burkholderia phytofirmans PsJN 6282928 YP_001897158.1 CDS Bphyt_3544 NC_010681.1 3988878 3989498 R KEGG: bxe:Bxe_A0414 ubiquinol-cytochrome C reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome C reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome C reductase, iron-sulfur subunit complement(3988878..3989498) Burkholderia phytofirmans PsJN 6283801 YP_001897159.1 CDS Bphyt_3545 NC_010681.1 3989754 3990500 R PFAM: protein of unknown function DUF34; KEGG: bxe:Bxe_A0413 protein of unknown function DUF34; hypothetical protein complement(3989754..3990500) Burkholderia phytofirmans PsJN 6283802 YP_001897160.1 CDS Bphyt_3546 NC_010681.1 3990520 3991743 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bxe:Bxe_A0412 exported serine protease HtrA/AlgW-like; 2-alkenal reductase 3990520..3991743 Burkholderia phytofirmans PsJN 6283803 YP_001897161.1 CDS Bphyt_3547 NC_010681.1 3991879 3992658 R TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: bxe:Bxe_A0411 twin-arginine translocation protein, TatC; Sec-independent protein translocase subunit TatC complement(3991879..3992658) Burkholderia phytofirmans PsJN 6283804 YP_001897162.1 CDS tatB NC_010681.1 3992693 3993211 R TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bxe:Bxe_A0410 sec-independent translocase; sec-independent translocase complement(3992693..3993211) Burkholderia phytofirmans PsJN 6283805 YP_001897163.1 CDS tatA NC_010681.1 3993251 3993490 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(3993251..3993490) Burkholderia phytofirmans PsJN 6283806 YP_001897164.1 CDS Bphyt_3550 NC_010681.1 3993728 3994093 R PFAM: histidine triad (HIT) protein; KEGG: bxe:Bxe_A0408 histidine triad (HIT) protein, HitA; histidine triad (HIT) protein complement(3993728..3994093) Burkholderia phytofirmans PsJN 6283807 YP_001897165.1 CDS Bphyt_3551 NC_010681.1 3994175 3994570 R KEGG: bxe:Bxe_A0407 hypothetical protein; hypothetical protein complement(3994175..3994570) Burkholderia phytofirmans PsJN 6282766 YP_001897166.1 CDS hisE NC_010681.1 3994665 3995060 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(3994665..3995060) Burkholderia phytofirmans PsJN 6282767 YP_001897167.1 CDS hisI NC_010681.1 3995057 3995467 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(3995057..3995467) Burkholderia phytofirmans PsJN 6282768 YP_001897168.1 CDS Bphyt_3554 NC_010681.1 3995469 3996242 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(3995469..3996242) Burkholderia phytofirmans PsJN 6282769 YP_001897169.1 CDS Bphyt_3555 NC_010681.1 3996480 3997232 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(3996480..3997232) Burkholderia phytofirmans PsJN 6282770 YP_001897170.1 CDS hisH NC_010681.1 3997462 3998103 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(3997462..3998103) Burkholderia phytofirmans PsJN 6282771 YP_001897171.1 CDS Bphyt_3557 NC_010681.1 3998100 3998720 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bxe:Bxe_A0401 multiple antibiotic resistance transporter MarC family; multiple antibiotic resistance (MarC)-like protein complement(3998100..3998720) Burkholderia phytofirmans PsJN 6282198 YP_001897172.1 CDS hisB NC_010681.1 3998800 3999387 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(3998800..3999387) Burkholderia phytofirmans PsJN 6282199 YP_001897173.1 CDS Bphyt_3559 NC_010681.1 3999501 4000571 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(3999501..4000571) Burkholderia phytofirmans PsJN 6282200 YP_001897174.1 CDS hisD NC_010681.1 4000740 4002062 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(4000740..4002062) Burkholderia phytofirmans PsJN 6282201 YP_001897175.1 CDS hisG NC_010681.1 4002120 4002818 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(4002120..4002818) Burkholderia phytofirmans PsJN 6282202 YP_001897176.1 CDS Bphyt_3562 NC_010681.1 4002815 4004077 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(4002815..4004077) Burkholderia phytofirmans PsJN 6282203 YP_001897177.1 CDS Bphyt_3563 NC_010681.1 4004189 4004428 R PFAM: BolA family protein; KEGG: bxe:Bxe_A0395 morphogene protein, BolA; BolA family protein complement(4004189..4004428) Burkholderia phytofirmans PsJN 6282204 YP_001897178.1 CDS Bphyt_3564 NC_010681.1 4004444 4005199 R PFAM: ABC transporter; KEGG: bxe:Bxe_A0394 ABC multidrug efflux pump, inner membrane subunit; ABC transporter complement(4004444..4005199) Burkholderia phytofirmans PsJN 6281615 YP_001897179.1 CDS Bphyt_3565 NC_010681.1 4005196 4006128 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A0393 ABC multidrug efflux pump, ATPase; ABC transporter complement(4005196..4006128) Burkholderia phytofirmans PsJN 6281616 YP_001897180.1 CDS Bphyt_3566 NC_010681.1 4006300 4006593 R KEGG: bxe:Bxe_A0392 hypothetical protein; hypothetical protein complement(4006300..4006593) Burkholderia phytofirmans PsJN 6281617 YP_001897181.1 CDS Bphyt_3567 NC_010681.1 4006590 4007222 R PFAM: toluene tolerance family protein; KEGG: bxe:Bxe_A0391 ABC transporter periplasmic ligand binding protein, toluene tolerance Ttg2D-like; toluene tolerance family protein complement(4006590..4007222) Burkholderia phytofirmans PsJN 6281618 YP_001897182.1 CDS Bphyt_3568 NC_010681.1 4007338 4008360 R PFAM: VacJ family lipoprotein; KEGG: bxe:Bxe_A0390 transmembrane lipoprotein, VacJ; VacJ family lipoprotein complement(4007338..4008360) Burkholderia phytofirmans PsJN 6281619 YP_001897183.1 CDS Bphyt_3569 NC_010681.1 4008372 4008932 R PFAM: hypothetical protein; KEGG: bxe:Bxe_A0389 signal peptide protein, toluene tolerance Ttg2C-like; hypothetical protein complement(4008372..4008932) Burkholderia phytofirmans PsJN 6281620 YP_001897184.1 CDS Bphyt_3570 NC_010681.1 4009024 4009791 R PFAM: protein of unknown function DUF140; KEGG: bxe:Bxe_A0388 ABC transporter inner membrane subunit, toluene tolerance Ttg2B-like; hypothetical protein complement(4009024..4009791) Burkholderia phytofirmans PsJN 6281621 YP_001897185.1 CDS Bphyt_3571 NC_010681.1 4009788 4010609 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A0387 ABC transporter ATPase, toluene tolerance Ttg2A-like; ABC transporter complement(4009788..4010609) Burkholderia phytofirmans PsJN 6281077 YP_001897186.1 CDS Bphyt_3572 NC_010681.1 4010704 4011807 R KEGG: bxe:Bxe_A0386 thiamin-phosphate pyrophosphorylase, ThiE; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(4010704..4011807) Burkholderia phytofirmans PsJN 6281078 YP_001897187.1 CDS thiG NC_010681.1 4011804 4012619 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(4011804..4012619) Burkholderia phytofirmans PsJN 6281079 YP_001897188.1 CDS Bphyt_3574 NC_010681.1 4012692 4012889 R with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS complement(4012692..4012889) Burkholderia phytofirmans PsJN 6281080 YP_001897189.1 CDS Bphyt_3575 NC_010681.1 4012971 4014101 R PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_A0383 D-amino acid oxidase flavoprotein; FAD dependent oxidoreductase complement(4012971..4014101) Burkholderia phytofirmans PsJN 6281081 YP_001897190.1 CDS Bphyt_3576 NC_010681.1 4014823 4016574 D PFAM: ABC transporter; SbmABacA family protein; ABC transporter domain protein; SMART: ATPase AAA; KEGG: bxe:Bxe_A0382 ABC efflux pump, fused ATPase and inner membrane subunits; ABC transporter 4014823..4016574 Burkholderia phytofirmans PsJN 6281082 YP_001897191.1 CDS Bphyt_3577 NC_010681.1 4016571 4017380 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A0381 dehydrogenase; short-chain dehydrogenase/reductase SDR 4016571..4017380 Burkholderia phytofirmans PsJN 6281494 YP_001897192.1 CDS Bphyt_3578 NC_010681.1 4017683 4018144 D KEGG: bxe:Bxe_A0380 hypothetical protein; hypothetical protein 4017683..4018144 Burkholderia phytofirmans PsJN 6281495 YP_001897193.1 CDS Bphyt_3579 NC_010681.1 4018233 4018874 D KEGG: bxe:Bxe_A0379 hypothetical protein; hypothetical protein 4018233..4018874 Burkholderia phytofirmans PsJN 6281496 YP_001897194.1 CDS Bphyt_3580 NC_010681.1 4018966 4019694 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0378 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 4018966..4019694 Burkholderia phytofirmans PsJN 6281497 YP_001897195.1 CDS Bphyt_3581 NC_010681.1 4019780 4020451 R PFAM: flagellar L-ring protein; KEGG: bxe:Bxe_A0377 flagellar L-ring protein precursor(basal body L-ring protein), FlgH; flagellar L-ring protein complement(4019780..4020451) Burkholderia phytofirmans PsJN 6281498 YP_001897196.1 CDS Bphyt_3582 NC_010681.1 4020514 4021227 R KEGG: bxe:Bxe_A0376 hypothetical protein; hypothetical protein complement(4020514..4021227) Burkholderia phytofirmans PsJN 6281499 YP_001897197.1 CDS Bphyt_3583 NC_010681.1 4021231 4021398 R KEGG: bxe:Bxe_A0375 lipoprotein; lipoprotein complement(4021231..4021398) Burkholderia phytofirmans PsJN 6282346 YP_001897198.1 CDS Bphyt_3584 NC_010681.1 4021444 4021626 R hypothetical protein complement(4021444..4021626) Burkholderia phytofirmans PsJN 6282347 YP_001897199.1 CDS Bphyt_3585 NC_010681.1 4022036 4022776 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0373 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 4022036..4022776 Burkholderia phytofirmans PsJN 6282348 YP_001897200.1 CDS Bphyt_3586 NC_010681.1 4022773 4024044 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A0372 signal transduction histidine kinases (STHK); integral membrane sensor signal transduction histidine kinase 4022773..4024044 Burkholderia phytofirmans PsJN 6282349 YP_001897201.1 CDS Bphyt_3587 NC_010681.1 4024232 4025182 R KEGG: bxe:Bxe_A0371 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase complement(4024232..4025182) Burkholderia phytofirmans PsJN 6282350 YP_001897202.1 CDS Bphyt_3588 NC_010681.1 4025517 4026776 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0370 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein 4025517..4026776 Burkholderia phytofirmans PsJN 6282351 YP_001897203.1 CDS Bphyt_3589 NC_010681.1 4026794 4028068 D PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_A0369 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 4026794..4028068 Burkholderia phytofirmans PsJN 6282352 YP_001897204.1 CDS gltD NC_010681.1 4028233 4029702 R glutamate synthase is composed of subunits alpha and beta; subunit beta is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the subunit alpha, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(4028233..4029702) Burkholderia phytofirmans PsJN 6282069 YP_001897205.1 CDS Bphyt_3591 NC_010681.1 4029824 4034527 R PFAM: glutamine amidotransferase class-II; glutamate synthase subunit alpha domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bxe:Bxe_A0365 glutamate synthase (ferredoxin); glutamate synthase complement(4029824..4034527) Burkholderia phytofirmans PsJN 6282070 YP_001897206.1 CDS Bphyt_3592 NC_010681.1 4034822 4035529 R PFAM: protein of unknown function DUF1568; KEGG: bxe:Bxe_A0364 conserved transposase-like protein; hypothetical protein complement(4034822..4035529) Burkholderia phytofirmans PsJN 6282071 YP_001897207.1 CDS Bphyt_3593 NC_010681.1 4035717 4036442 D PFAM: OmpW family protein; KEGG: bxe:Bxe_A0363 outer membrane porin, OmpW family; OmpW family protein 4035717..4036442 Burkholderia phytofirmans PsJN 6282072 YP_001897208.1 CDS Bphyt_3594 NC_010681.1 4036439 4036711 R hypothetical protein complement(4036439..4036711) Burkholderia phytofirmans PsJN 6282073 YP_001897209.1 CDS Bphyt_3595 NC_010681.1 4036792 4037172 D PFAM: protein of unknown function DUF883 ElaB; KEGG: bxe:Bxe_A0362 membrane protein, ElaB-like; hypothetical protein 4036792..4037172 Burkholderia phytofirmans PsJN 6282074 YP_001897210.1 CDS Bphyt_3596 NC_010681.1 4037298 4038503 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(4037298..4038503) Burkholderia phytofirmans PsJN 6282075 YP_001897211.1 CDS aroB NC_010681.1 4038575 4039660 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(4038575..4039660) Burkholderia phytofirmans PsJN 6283025 YP_001897212.1 CDS aroK NC_010681.1 4039660 4040211 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(4039660..4040211) Burkholderia phytofirmans PsJN 6283026 YP_001897213.1 CDS Bphyt_3599 NC_010681.1 4040407 4042182 R TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: bxe:Bxe_A0358 fimbrial type-4 assembly signal peptide, PilQ-like; type IV pilus secretin PilQ complement(4040407..4042182) Burkholderia phytofirmans PsJN 6283027 YP_001897214.1 CDS Bphyt_3600 NC_010681.1 4042182 4043114 R KEGG: bxe:Bxe_A0357 hypothetical protein; hypothetical protein complement(4042182..4043114) Burkholderia phytofirmans PsJN 6283028 YP_001897215.1 CDS Bphyt_3601 NC_010681.1 4043111 4043830 R PFAM: fimbrial assembly family protein; KEGG: bxe:Bxe_A0356 hypothetical protein; fimbrial assembly family protein complement(4043111..4043830) Burkholderia phytofirmans PsJN 6283029 YP_001897216.1 CDS Bphyt_3602 NC_010681.1 4043827 4044819 R KEGG: bxe:Bxe_A0355 hypothetical protein; hypothetical protein complement(4043827..4044819) Burkholderia phytofirmans PsJN 6283030 YP_001897217.1 CDS Bphyt_3603 NC_010681.1 4045074 4047473 D KEGG: bxe:Bxe_A0354 penicillin-binding 1 (peptoglycansynthetase) transmembrane protein, MrcA; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 4045074..4047473 Burkholderia phytofirmans PsJN 6284158 YP_001897218.1 CDS cyaY NC_010681.1 4047597 4047914 R defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein complement(4047597..4047914) Burkholderia phytofirmans PsJN 6284159 YP_001897219.1 CDS Bphyt_3605 NC_010681.1 4047950 4048288 D KEGG: bxe:Bxe_A0352 lipoprotein; lipoprotein 4047950..4048288 Burkholderia phytofirmans PsJN 6284160 YP_001897220.1 CDS Bphyt_3606 NC_010681.1 4048298 4049560 D TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bxe:Bxe_A0351 diaminopimelate decarboxylase; diaminopimelate decarboxylase 4048298..4049560 Burkholderia phytofirmans PsJN 6284161 YP_001897221.1 CDS Bphyt_3607 NC_010681.1 4049648 4050346 R in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ complement(4049648..4050346) Burkholderia phytofirmans PsJN 6284162 YP_001897222.1 CDS Bphyt_3608 NC_010681.1 4050358 4051353 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY complement(4050358..4051353) Burkholderia phytofirmans PsJN 6284163 YP_001897223.1 CDS Bphyt_3609 NC_010681.1 4051543 4052748 R TIGRFAM: cytochrome C biogenesis protein CcsB; PFAM: cytochrome C assembly protein; KEGG: bxe:Bxe_A0348 cytochrome C assembly protein; cytochrome C biogenesis protein CcsB complement(4051543..4052748) Burkholderia phytofirmans PsJN 6284164 YP_001897224.1 CDS Bphyt_3610 NC_010681.1 4052753 4054966 R PFAM: ResB family protein; KEGG: bxe:Bxe_A0347 cytochrome c biogenesis protein; ResB family protein complement(4052753..4054966) Burkholderia phytofirmans PsJN 6283149 YP_001897225.1 CDS Bphyt_3611 NC_010681.1 4055168 4055821 R PFAM: cytochrome C class I; KEGG: bxe:Bxe_A0346 cytochrome c, class I; cytochrome C class I complement(4055168..4055821) Burkholderia phytofirmans PsJN 6283150 YP_001897226.1 CDS engB NC_010681.1 4056086 4056739 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 4056086..4056739 Burkholderia phytofirmans PsJN 6283151 YP_001897227.1 CDS Bphyt_3613 NC_010681.1 4056992 4057990 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 4056992..4057990 Burkholderia phytofirmans PsJN 6283152 YP_001897228.1 CDS Bphyt_3614 NC_010681.1 4057945 4058166 R hypothetical protein complement(4057945..4058166) Burkholderia phytofirmans PsJN 6283153 YP_001897229.1 CDS Bphyt_3615 NC_010681.1 4058285 4060165 R PFAM: cytochrome C biogenesis protein transmembrane region; thioredoxin domain; KEGG: bxe:Bxe_A0343 protein-disulfide reductase; protein-disulfide reductase complement(4058285..4060165) Burkholderia phytofirmans PsJN 6283154 YP_001897230.1 CDS Bphyt_3616 NC_010681.1 4060158 4060490 R PFAM: CutA1 divalent ion tolerance protein; KEGG: bxe:Bxe_A0342 periplasmic cytochrome biogenesis protein; CutA1 divalent ion tolerance protein complement(4060158..4060490) Burkholderia phytofirmans PsJN 6283155 YP_001897231.1 CDS rplQ NC_010681.1 4060658 4061050 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(4060658..4061050) Burkholderia phytofirmans PsJN 6284333 YP_001897232.1 CDS Bphyt_3618 NC_010681.1 4061233 4062210 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(4061233..4062210) Burkholderia phytofirmans PsJN 6284334 YP_001897233.1 CDS rpsD NC_010681.1 4062335 4062958 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(4062335..4062958) Burkholderia phytofirmans PsJN 6284335 YP_001897234.1 CDS Bphyt_3620 NC_010681.1 4063106 4063510 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(4063106..4063510) Burkholderia phytofirmans PsJN 6284336 YP_001897235.1 CDS rpsM NC_010681.1 4063539 4063904 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(4063539..4063904) Burkholderia phytofirmans PsJN 6284337 YP_001897236.1 CDS rpmJ NC_010681.1 4063946 4064062 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(4063946..4064062) Burkholderia phytofirmans PsJN 6284338 YP_001897237.1 CDS infA NC_010681.1 4064083 4064301 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(4064083..4064301) Burkholderia phytofirmans PsJN 6284686 YP_001897238.1 CDS secY NC_010681.1 4064310 4065656 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(4064310..4065656) Burkholderia phytofirmans PsJN 6284687 YP_001897239.1 CDS rplO NC_010681.1 4065703 4066137 R late assembly protein; 50S ribosomal protein L15 complement(4065703..4066137) Burkholderia phytofirmans PsJN 6284688 YP_001897240.1 CDS rpmD NC_010681.1 4066167 4066349 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(4066167..4066349) Burkholderia phytofirmans PsJN 6284689 YP_001897241.1 CDS rpsE NC_010681.1 4066360 4066878 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(4066360..4066878) Burkholderia phytofirmans PsJN 6284690 YP_001897242.1 CDS rplR NC_010681.1 4066893 4067258 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(4066893..4067258) Burkholderia phytofirmans PsJN 6284691 YP_001897243.1 CDS rplF NC_010681.1 4067271 4067801 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(4067271..4067801) Burkholderia phytofirmans PsJN 6284692 YP_001897244.1 CDS rpsH NC_010681.1 4067820 4068215 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(4067820..4068215) Burkholderia phytofirmans PsJN 6282759 YP_001897245.1 CDS rpsN NC_010681.1 4068230 4068535 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(4068230..4068535) Burkholderia phytofirmans PsJN 6282760 YP_001897246.1 CDS rplE NC_010681.1 4068543 4069082 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(4068543..4069082) Burkholderia phytofirmans PsJN 6282761 YP_001897247.1 CDS rplX NC_010681.1 4069100 4069408 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(4069100..4069408) Burkholderia phytofirmans PsJN 6282762 YP_001897248.1 CDS rplN NC_010681.1 4069418 4069786 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(4069418..4069786) Burkholderia phytofirmans PsJN 6282763 YP_001897249.1 CDS rpsQ NC_010681.1 4070077 4070349 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(4070077..4070349) Burkholderia phytofirmans PsJN 6282764 YP_001897250.1 CDS Bphyt_3636 NC_010681.1 4070346 4070540 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(4070346..4070540) Burkholderia phytofirmans PsJN 6282765 YP_001897251.1 CDS rplP NC_010681.1 4070551 4070967 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(4070551..4070967) Burkholderia phytofirmans PsJN 6284377 YP_001897252.1 CDS rpsC NC_010681.1 4070970 4071776 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(4070970..4071776) Burkholderia phytofirmans PsJN 6284378 YP_001897253.1 CDS rplV NC_010681.1 4071788 4072120 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(4071788..4072120) Burkholderia phytofirmans PsJN 6284379 YP_001897254.1 CDS rpsS NC_010681.1 4072128 4072403 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(4072128..4072403) Burkholderia phytofirmans PsJN 6284380 YP_001897255.1 CDS rplB NC_010681.1 4072414 4073241 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(4072414..4073241) Burkholderia phytofirmans PsJN 6284381 YP_001897256.1 CDS rplW NC_010681.1 4073244 4073558 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(4073244..4073558) Burkholderia phytofirmans PsJN 6284382 YP_001897257.1 CDS rplD NC_010681.1 4073555 4074175 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(4073555..4074175) Burkholderia phytofirmans PsJN 6284383 YP_001897258.1 CDS rplC NC_010681.1 4074175 4074834 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(4074175..4074834) Burkholderia phytofirmans PsJN 6283117 YP_001897259.1 CDS rpsJ NC_010681.1 4075036 4075347 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(4075036..4075347) Burkholderia phytofirmans PsJN 6283118 YP_001897260.1 CDS Bphyt_3646 NC_010681.1 4075478 4076668 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(4075478..4076668) Burkholderia phytofirmans PsJN 6283119 YP_001897261.1 CDS Bphyt_3647 NC_010681.1 4076716 4078818 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(4076716..4078818) Burkholderia phytofirmans PsJN 6283120 YP_001897262.1 CDS Bphyt_3648 NC_010681.1 4078953 4079423 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(4078953..4079423) Burkholderia phytofirmans PsJN 6283121 YP_001897263.1 CDS rpsL NC_010681.1 4079602 4079982 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(4079602..4079982) Burkholderia phytofirmans PsJN 6283122 YP_001897264.1 CDS Bphyt_3650 NC_010681.1 4080205 4082052 R KEGG: bxe:Bxe_A0308 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase; HRDC domain protein; DEAD/DEAH box helicase; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ complement(4080205..4082052) Burkholderia phytofirmans PsJN 6283082 YP_001897265.1 CDS Bphyt_3651 NC_010681.1 4082271 4086509 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(4082271..4086509) Burkholderia phytofirmans PsJN 6283083 YP_001897266.1 CDS rpoB NC_010681.1 4086531 4090637 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; subunit beta is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(4086531..4090637) Burkholderia phytofirmans PsJN 6283084 YP_001897267.1 CDS rplL NC_010681.1 4091009 4091383 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(4091009..4091383) Burkholderia phytofirmans PsJN 6283085 YP_001897268.1 CDS rplJ NC_010681.1 4091447 4091950 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(4091447..4091950) Burkholderia phytofirmans PsJN 6283086 YP_001897269.1 CDS rplA NC_010681.1 4092252 4092950 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(4092252..4092950) Burkholderia phytofirmans PsJN 6283087 YP_001897270.1 CDS rplK NC_010681.1 4092951 4093382 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(4092951..4093382) Burkholderia phytofirmans PsJN 6283088 YP_001897271.1 CDS nusG NC_010681.1 4093548 4094105 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(4093548..4094105) Burkholderia phytofirmans PsJN 6282353 YP_001897272.1 CDS secE NC_010681.1 4094107 4094487 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(4094107..4094487) Burkholderia phytofirmans PsJN 6282354 YP_001897273.1 CDS Bphyt_3659 NC_010681.1 4094664 4095854 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(4094664..4095854) Burkholderia phytofirmans PsJN 6282356 YP_001897274.1 CDS Bphyt_3660 NC_010681.1 4102218 4103486 R PFAM: lipolytic protein G-D-S-L family; KEGG: bxe:Bxe_A0297 lipase/acylhydrolase; G-D-S-L family lipolytic protein complement(4102218..4103486) Burkholderia phytofirmans PsJN 6281438 YP_001897275.1 CDS Bphyt_3661 NC_010681.1 4103578 4105200 R PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_A0296 uncharacterized FAD-dependent dehydrogenase; FAD dependent oxidoreductase complement(4103578..4105200) Burkholderia phytofirmans PsJN 6283340 YP_001897276.1 CDS paaA NC_010681.1 4105416 4106414 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 4105416..4106414 Burkholderia phytofirmans PsJN 6283341 YP_001897277.1 CDS paaB NC_010681.1 4106453 4106737 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 4106453..4106737 Burkholderia phytofirmans PsJN 6283342 YP_001897278.1 CDS Bphyt_3664 NC_010681.1 4106746 4107549 D TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: bxe:Bxe_A0293 phenylacetic acid degradation protein PaaC; phenylacetate-CoA oxygenase subunit PaaI 4106746..4107549 Burkholderia phytofirmans PsJN 6283343 YP_001897279.1 CDS Bphyt_3665 NC_010681.1 4107557 4108108 D TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: bxe:Bxe_A0292 phenylacetic acid degradation protein PaaD; phenylacetate-CoA oxygenase subunit PaaJ 4107557..4108108 Burkholderia phytofirmans PsJN 6283344 YP_001897280.1 CDS Bphyt_3666 NC_010681.1 4108110 4109198 D TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: bxe:Bxe_A0291 phenylacetic acid degradation NADH oxidoreductase PaaE; phenylacetate-CoA oxygenase/reductase subunit PaaK 4108110..4109198 Burkholderia phytofirmans PsJN 6283534 YP_001897281.1 CDS Bphyt_3667 NC_010681.1 4109345 4110157 D PFAM: Domain of unknown function DUF1835; KEGG: bxe:Bxe_A0290 hypothetical protein; hypothetical protein 4109345..4110157 Burkholderia phytofirmans PsJN 6283535 YP_001897282.1 CDS Bphyt_3668 NC_010681.1 4110172 4110780 D PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A0289 TetR family transcriptional regulator (PaaR); TetR family transcriptional regulator 4110172..4110780 Burkholderia phytofirmans PsJN 6283536 YP_001897283.1 CDS Bphyt_3669 NC_010681.1 4111022 4111690 D PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A0288 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4111022..4111690 Burkholderia phytofirmans PsJN 6283537 YP_001897284.1 CDS Bphyt_3670 NC_010681.1 4111773 4112270 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_A0287 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(4111773..4112270) Burkholderia phytofirmans PsJN 6283538 YP_001897285.1 CDS Bphyt_3671 NC_010681.1 4112425 4113522 D KEGG: bxe:Bxe_A0286 4-hydroxyphenylpyruvate dioxygenase (Hpd); TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 4112425..4113522 Burkholderia phytofirmans PsJN 6283539 YP_001897286.1 CDS Bphyt_3672 NC_010681.1 4113680 4113880 R KEGG: bte:BTH_I3107 hypothetical protein; hypothetical protein complement(4113680..4113880) Burkholderia phytofirmans PsJN 6283540 YP_001897287.1 CDS Bphyt_3673 NC_010681.1 4114238 4117837 D Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 4114238..4117837 Burkholderia phytofirmans PsJN 6282892 YP_001897288.1 CDS Bphyt_3674 NC_010681.1 4118059 4120341 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(4118059..4120341) Burkholderia phytofirmans PsJN 6282893 YP_001897289.1 CDS Bphyt_3675 NC_010681.1 4120655 4121887 R PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0282 major facilitator superfamily (MFS) transporter; major facilitator superfamily protein complement(4120655..4121887) Burkholderia phytofirmans PsJN 6282894 YP_001897290.1 CDS pyrE NC_010681.1 4122251 4122937 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 4122251..4122937 Burkholderia phytofirmans PsJN 6282895 YP_001897291.1 CDS Bphyt_3677 NC_010681.1 4123030 4123719 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_A0280 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(4123030..4123719) Burkholderia phytofirmans PsJN 6282896 YP_001897292.1 CDS Bphyt_3678 NC_010681.1 4123985 4124587 D PFAM: PEBP family protein; KEGG: bxe:Bxe_A0279 conserved hypothetical protein 481; PEBP family protein 4123985..4124587 Burkholderia phytofirmans PsJN 6282897 YP_001897293.1 CDS Bphyt_3679 NC_010681.1 4124804 4125376 D PFAM: flavodoxin/nitric oxide synthase; KEGG: bxe:Bxe_A0278 flavoprotein; flavodoxin/nitric oxide synthase 4124804..4125376 Burkholderia phytofirmans PsJN 6282898 YP_001897294.1 CDS Bphyt_3680 NC_010681.1 4125507 4126508 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 4125507..4126508 Burkholderia phytofirmans PsJN 6281883 YP_001897295.1 CDS Bphyt_3681 NC_010681.1 4127003 4128433 D KEGG: bxe:Bxe_A0275 lipoprotein; lipoprotein 4127003..4128433 Burkholderia phytofirmans PsJN 6281884 YP_001897296.1 CDS Bphyt_3682 NC_010681.1 4128559 4129803 D KEGG: bxe:Bxe_A0274 lipoprotein; lipoprotein 4128559..4129803 Burkholderia phytofirmans PsJN 6281885 YP_001897297.1 CDS Bphyt_3683 NC_010681.1 4129978 4130802 D PFAM: OmpW family protein; KEGG: bxe:Bxe_A0273 outer membrane porin, OmpW family; OmpW family protein 4129978..4130802 Burkholderia phytofirmans PsJN 6281886 YP_001897298.1 CDS Bphyt_3684 NC_010681.1 4131074 4131709 R PFAM: lysine exporter (LYSE/YGGA); KEGG: bxe:Bxe_A0272 amino acid efflux pump, RhtB family; lysine exporter protein LysE/YggA complement(4131074..4131709) Burkholderia phytofirmans PsJN 6281887 YP_001897299.1 CDS Bphyt_3685 NC_010681.1 4131792 4132661 R PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_A0271 oxidoreductase; 6-phosphogluconate dehydrogenase complement(4131792..4132661) Burkholderia phytofirmans PsJN 6281888 YP_001897300.1 CDS Bphyt_3686 NC_010681.1 4132756 4133517 D PFAM: protein of unknown function DUF82; KEGG: bxe:Bxe_A0270 hypothetical protein; hypothetical protein 4132756..4133517 Burkholderia phytofirmans PsJN 6282384 YP_001897301.1 CDS Bphyt_3687 NC_010681.1 4133646 4133924 D KEGG: bxe:Bxe_A0269 hypothetical protein; hypothetical protein 4133646..4133924 Burkholderia phytofirmans PsJN 6282385 YP_001897302.1 CDS Bphyt_3688 NC_010681.1 4134079 4134288 R KEGG: bxe:Bxe_A0268 hypothetical protein; hypothetical protein complement(4134079..4134288) Burkholderia phytofirmans PsJN 6282386 YP_001897303.1 CDS Bphyt_3689 NC_010681.1 4134513 4135265 R PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: bxe:Bxe_A0267 IclR family transcriptional regulator; IclR family transcriptional regulator complement(4134513..4135265) Burkholderia phytofirmans PsJN 6282387 YP_001897304.1 CDS Bphyt_3690 NC_010681.1 4135511 4136401 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A0266 membrane protein; hypothetical protein 4135511..4136401 Burkholderia phytofirmans PsJN 6282388 YP_001897305.1 CDS Bphyt_3691 NC_010681.1 4136489 4136740 R KEGG: bch:Bcen2424_6850 hypothetical protein; hypothetical protein complement(4136489..4136740) Burkholderia phytofirmans PsJN 6282389 YP_001897306.1 CDS Bphyt_3692 NC_010681.1 4137520 4138206 R KEGG: bxe:Bxe_A0263 lipoprotein; lipoprotein complement(4137520..4138206) Burkholderia phytofirmans PsJN 6282390 YP_001897307.1 CDS Bphyt_3693 NC_010681.1 4138363 4139046 R PFAM: lytic transglycosylase catalytic; KEGG: bxe:Bxe_A0262 hypothetical protein; lytic transglycosylase complement(4138363..4139046) Burkholderia phytofirmans PsJN 6281277 YP_001897308.1 CDS Bphyt_3694 NC_010681.1 4139386 4140351 R PFAM: protein of unknown function UPF0074; regulatory protein DeoR; hypothetical protein; KEGG: hch:HCH_06726 predicted transcriptional regulator; hypothetical protein complement(4139386..4140351) Burkholderia phytofirmans PsJN 6281278 YP_001897309.1 CDS Bphyt_3695 NC_010681.1 4140485 4141132 D PFAM: glutathione S-transferase; KEGG: scl:sce6741 hypothetical protein; glutathione S-transferase 4140485..4141132 Burkholderia phytofirmans PsJN 6281279 YP_001897310.1 CDS Bphyt_3696 NC_010681.1 4141312 4141572 D KEGG: bxe:Bxe_A0261 hypothetical protein; hypothetical protein 4141312..4141572 Burkholderia phytofirmans PsJN 6281280 YP_001897311.1 CDS Bphyt_3697 NC_010681.1 4141645 4142247 D KEGG: bxe:Bxe_B2165 hypothetical protein; hypothetical protein 4141645..4142247 Burkholderia phytofirmans PsJN 6281281 YP_001897312.1 CDS Bphyt_3698 NC_010681.1 4142252 4142629 R PFAM: response regulator receiver; KEGG: bxe:Bxe_B2580 response regulator receiver domain protein(CheY); response regulator receiver protein complement(4142252..4142629) Burkholderia phytofirmans PsJN 6281282 YP_001897313.1 CDS Bphyt_3699 NC_010681.1 4142824 4143474 D KEGG: bmu:Bmul_5340 hypothetical protein; hypothetical protein 4142824..4143474 Burkholderia phytofirmans PsJN 6281004 YP_001897314.1 CDS Bphyt_3700 NC_010681.1 4144001 4144981 R KEGG: bxe:Bxe_A0256 hypothetical protein; hypothetical protein complement(4144001..4144981) Burkholderia phytofirmans PsJN 6281005 YP_001897315.1 CDS Bphyt_3701 NC_010681.1 4145010 4145678 R KEGG: bch:Bcen2424_3408 major facilitator superfamily MFS_1; hypothetical protein complement(4145010..4145678) Burkholderia phytofirmans PsJN 6281006 YP_001897316.1 CDS Bphyt_3702 NC_010681.1 4145797 4146153 R KEGG: dac:Daci_1731 hypothetical protein; hypothetical protein complement(4145797..4146153) Burkholderia phytofirmans PsJN 6281007 YP_001897317.1 CDS Bphyt_3703 NC_010681.1 4146190 4147500 R PFAM: chloride channel core; KEGG: bte:BTH_II0508 voltage-gated chloride channel; chloride channel core complement(4146190..4147500) Burkholderia phytofirmans PsJN 6281008 YP_001897318.1 CDS Bphyt_3704 NC_010681.1 4147972 4148337 D PFAM: arsenic resistance operon trans-acting repressor ArsD; KEGG: azo:azo2355 arsenical resistance operon trans-acting repressor; arsenic resistance operon trans-acting repressor ArsD 4147972..4148337 Burkholderia phytofirmans PsJN 6281009 YP_001897319.1 CDS Bphyt_3705 NC_010681.1 4148351 4150105 D KEGG: bmu:Bmul_5668 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: ATPase AAA; arsenite-activated ATPase ArsA 4148351..4150105 Burkholderia phytofirmans PsJN 6281010 YP_001897320.1 CDS Bphyt_3706 NC_010681.1 4150221 4151483 D PFAM: protein of unknown function DUF1504; KEGG: bcm:Bcenmc03_4249 protein of unknown function DUF1504; hypothetical protein 4150221..4151483 Burkholderia phytofirmans PsJN 6281649 YP_001897321.1 CDS Bphyt_3707 NC_010681.1 4151880 4152533 D PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_B0144 histone-like nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 4151880..4152533 Burkholderia phytofirmans PsJN 6281650 YP_001897322.1 CDS Bphyt_3709 NC_010681.1 4153721 4154872 R PFAM: porin Gram-negative type; KEGG: bmu:Bmul_4702 porin gram-negative type; porin complement(4153721..4154872) Burkholderia phytofirmans PsJN 6281652 YP_001897323.1 CDS Bphyt_3710 NC_010681.1 4155224 4156450 R PFAM: major facilitator superfamily MFS_1; KEGG: lsp:Bsph_3564 probable glucarate transporter (D-glucarate permease); major facilitator superfamily protein complement(4155224..4156450) Burkholderia phytofirmans PsJN 6281653 YP_001897324.1 CDS Bphyt_3711 NC_010681.1 4156744 4158192 D PFAM: MlrC domain protein; Microcystin LR degradation protein MlrC-like; KEGG: bpt:Bpet0281 hypothetical protein; microcystin LR degradation protein MlrC-like protein 4156744..4158192 Burkholderia phytofirmans PsJN 6281654 YP_001897325.1 CDS Bphyt_3713 NC_010681.1 4159052 4159939 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_4442 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4159052..4159939) Burkholderia phytofirmans PsJN 6284605 YP_001897326.1 CDS Bphyt_3714 NC_010681.1 4160132 4161592 R PFAM: amidohydrolase; D-aminoacylase domain protein; amidohydrolase; KEGG: bra:BRADO6610 D-aminoacylase (N-acyl-D-amino-acid deacylase); D-aminoacylase domain-containing protein complement(4160132..4161592) Burkholderia phytofirmans PsJN 6284606 YP_001897327.1 CDS Bphyt_3715 NC_010681.1 4161677 4162594 R PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bxe:Bxe_A1829 ornithine cyclodeaminase; ornithine cyclodeaminase/mu-crystallin complement(4161677..4162594) Burkholderia phytofirmans PsJN 6284607 YP_001897328.1 CDS Bphyt_3716 NC_010681.1 4162917 4164206 D PFAM: FAD dependent oxidoreductase; KEGG: rme:Rmet_4441 FAD dependent oxidoreductase; D-amino-acid dehydrogenase 4162917..4164206 Burkholderia phytofirmans PsJN 6284608 YP_001897329.1 CDS Bphyt_3717 NC_010681.1 4164232 4164585 D PFAM: endoribonuclease L-PSP; KEGG: bur:Bcep18194_B0063 endoribonuclease L-PSP; endoribonuclease L-PSP 4164232..4164585 Burkholderia phytofirmans PsJN 6284609 YP_001897330.1 CDS Bphyt_3718 NC_010681.1 4165997 4166596 D TIGRFAM: LexA repressor; PFAM: peptidase S24 and S26 domain protein; KEGG: mfa:Mfla_1781 prophage repressor; LexA repressor 4165997..4166596 Burkholderia phytofirmans PsJN 6283031 YP_001897331.1 CDS Bphyt_3719 NC_010681.1 4166699 4167376 D hypothetical protein 4166699..4167376 Burkholderia phytofirmans PsJN 6283032 YP_001897332.1 CDS Bphyt_3720 NC_010681.1 4167538 4168287 D PFAM: Gp37Gp68 family protein; KEGG: pap:PSPA7_3059 phage Gp37Gp68 family protein; Gp37Gp68 family protein 4167538..4168287 Burkholderia phytofirmans PsJN 6283033 YP_001897333.1 CDS Bphyt_3721 NC_010681.1 4168295 4169572 R KEGG: pau:PA14_35800 hypothetical protein; hypothetical protein complement(4168295..4169572) Burkholderia phytofirmans PsJN 6283034 YP_001897334.1 CDS Bphyt_3722 NC_010681.1 4169743 4170522 D KEGG: rfr:Rfer_1071 hypothetical protein; hypothetical protein 4169743..4170522 Burkholderia phytofirmans PsJN 6283035 YP_001897335.1 CDS Bphyt_3723 NC_010681.1 4170710 4172344 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pst:PSPTO_0043 cytidine/deoxycytidylate deaminase family protein; zinc-binding CMP/dCMP deaminase 4170710..4172344 Burkholderia phytofirmans PsJN 6283036 YP_001897336.1 CDS Bphyt_3724 NC_010681.1 4172360 4172575 D hypothetical protein 4172360..4172575 Burkholderia phytofirmans PsJN 6283037 YP_001897337.1 CDS Bphyt_3725 NC_010681.1 4172814 4172915 D hypothetical protein 4172814..4172915 Burkholderia phytofirmans PsJN 6282942 YP_001897338.1 CDS Bphyt_3726 NC_010681.1 4172958 4173200 D hypothetical protein 4172958..4173200 Burkholderia phytofirmans PsJN 6282943 YP_001897339.1 CDS Bphyt_3727 NC_010681.1 4173337 4174311 R KEGG: bpd:BURPS668_3501 hypothetical protein; hypothetical protein complement(4173337..4174311) Burkholderia phytofirmans PsJN 6282944 YP_001897340.1 CDS Bphyt_3728 NC_010681.1 4174924 4176741 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(4174924..4176741) Burkholderia phytofirmans PsJN 6282945 YP_001897341.1 CDS Bphyt_3729 NC_010681.1 4176811 4178172 R TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; nucleotidyl transferase; KEGG: bxe:Bxe_A0207 UDP-N-acetylglucosamine pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase complement(4176811..4178172) Burkholderia phytofirmans PsJN 6282946 YP_001897342.1 CDS Bphyt_3730 NC_010681.1 4178299 4179309 R PFAM: PP-loop domain protein; KEGG: bxe:Bxe_A0206 hypothetical protein; PP-loop domain-containing protein complement(4178299..4179309) Burkholderia phytofirmans PsJN 6282947 YP_001897343.1 CDS Bphyt_3731 NC_010681.1 4179313 4179708 R KEGG: bxe:Bxe_A0205 dihydroneopterin aldolase; dihydroneopterin aldolase complement(4179313..4179708) Burkholderia phytofirmans PsJN 6283123 YP_001897344.1 CDS Bphyt_3732 NC_010681.1 4179799 4180617 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A0204 short chain dehydrogenase; short chain dehydrogenase complement(4179799..4180617) Burkholderia phytofirmans PsJN 6283124 YP_001897345.1 CDS Bphyt_3733 NC_010681.1 4180631 4181821 D PFAM: protein of unknown function DUF185; KEGG: bxe:Bxe_A0203 hypothetical protein; hypothetical protein 4180631..4181821 Burkholderia phytofirmans PsJN 6283125 YP_001897346.1 CDS Bphyt_3734 NC_010681.1 4181844 4182038 D KEGG: bxe:Bxe_A0202 hypothetical protein; hypothetical protein 4181844..4182038 Burkholderia phytofirmans PsJN 6283126 YP_001897347.1 CDS cca NC_010681.1 4182788 4184020 R catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase complement(4182788..4184020) Burkholderia phytofirmans PsJN 6283127 YP_001897348.1 CDS Bphyt_3736 NC_010681.1 4184017 4184670 R KEGG: bxe:Bxe_A0200 glutathione S-transferase; glutathione S-transferase complement(4184017..4184670) Burkholderia phytofirmans PsJN 6283128 YP_001897349.1 CDS Bphyt_3737 NC_010681.1 4184697 4185650 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: bxe:Bxe_A0199 hypothetical protein; NADH dehydrogenase complement(4184697..4185650) Burkholderia phytofirmans PsJN 6283129 YP_001897350.1 CDS Bphyt_3738 NC_010681.1 4185733 4187700 R PFAM: lytic transglycosylase catalytic; KEGG: bxe:Bxe_A0198 transglycosylase; lytic transglycosylase complement(4185733..4187700) Burkholderia phytofirmans PsJN 6281507 YP_001897351.1 CDS Bphyt_3739 NC_010681.1 4187778 4188320 D PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: bxe:Bxe_A0197 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 4187778..4188320 Burkholderia phytofirmans PsJN 6281508 YP_001897352.1 CDS Bphyt_3740 NC_010681.1 4188364 4188876 R PFAM: regulatory protein MarR; KEGG: bxe:Bxe_A0196 hypothetical protein; transcriptional regulator complement(4188364..4188876) Burkholderia phytofirmans PsJN 6281509 YP_001897353.1 CDS Bphyt_3741 NC_010681.1 4189082 4189735 D PFAM: allophanate hydrolase subunit 1; KEGG: bxe:Bxe_A0195 conserved hypothetical protein 370; allophanate hydrolase subunit 1 4189082..4189735 Burkholderia phytofirmans PsJN 6281510 YP_001897354.1 CDS Bphyt_3742 NC_010681.1 4189732 4190784 D TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; KEGG: bxe:Bxe_A0194 UreA amidolyase-related protein; urea amidolyase-like protein 4189732..4190784 Burkholderia phytofirmans PsJN 6281511 YP_001897355.1 CDS Bphyt_3743 NC_010681.1 4190888 4191640 D PFAM: LamB/YcsF family protein; KEGG: bxe:Bxe_A0193 hypothetical protein; LamB/YcsF family protein 4190888..4191640 Burkholderia phytofirmans PsJN 6281512 YP_001897356.1 CDS Bphyt_3744 NC_010681.1 4191905 4192654 D PFAM: protein of unknown function DUF969; KEGG: bxe:Bxe_A0192 membrane protein; hypothetical protein 4191905..4192654 Burkholderia phytofirmans PsJN 6282772 YP_001897357.1 CDS Bphyt_3745 NC_010681.1 4192651 4193607 D PFAM: protein of unknown function DUF979; KEGG: bxe:Bxe_A0191 membrane protein; hypothetical protein 4192651..4193607 Burkholderia phytofirmans PsJN 6282773 YP_001897358.1 CDS Bphyt_3746 NC_010681.1 4193821 4195629 D PFAM: hypothetical protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_A0190 hypothetical protein; hypothetical protein 4193821..4195629 Burkholderia phytofirmans PsJN 6282774 YP_001897359.1 CDS Bphyt_3747 NC_010681.1 4195701 4195958 R KEGG: bxe:Bxe_A0189 hypothetical protein; hypothetical protein complement(4195701..4195958) Burkholderia phytofirmans PsJN 6282775 YP_001897360.1 CDS Bphyt_3748 NC_010681.1 4195998 4196276 R PFAM: protein of unknown function DUF497; KEGG: bxe:Bxe_A0188 hypothetical protein; hypothetical protein complement(4195998..4196276) Burkholderia phytofirmans PsJN 6282776 YP_001897361.1 CDS Bphyt_3749 NC_010681.1 4196477 4197640 R PFAM: GumN family protein; KEGG: bxe:Bxe_A0187 exported protein; GumN family protein complement(4196477..4197640) Burkholderia phytofirmans PsJN 6282777 YP_001897362.1 CDS dppF NC_010681.1 4197633 4198652 R Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit complement(4197633..4198652) Burkholderia phytofirmans PsJN 6282016 YP_001897363.1 CDS Bphyt_3751 NC_010681.1 4198649 4199653 R KEGG: bxe:Bxe_A0185 ABC dipeptide/oligopeptide/nickel transporter ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; peptide ABC transporter ATPase complement(4198649..4199653) Burkholderia phytofirmans PsJN 6282017 YP_001897364.1 CDS Bphyt_3752 NC_010681.1 4199654 4200571 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0184 ABC dipeptide/oligopeptide/nickel family transporter inner membrane subunit; peptide ABC transporter inner membrane protein complement(4199654..4200571) Burkholderia phytofirmans PsJN 6282018 YP_001897365.1 CDS Bphyt_3753 NC_010681.1 4200578 4201588 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A0183 ABC dipeptide/oligopeptide/nickel family transporter inner membrane subunit; alkaline phosphatase complement(4200578..4201588) Burkholderia phytofirmans PsJN 6282019 YP_001897366.1 CDS Bphyt_3754 NC_010681.1 4201727 4203355 R PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A0182 ABC dipeptide transporter periplasmic ligand binding protein; family 5 extracellular solute-binding protein complement(4201727..4203355) Burkholderia phytofirmans PsJN 6282020 YP_001897367.1 CDS Bphyt_3755 NC_010681.1 4203597 4205240 R PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A0181 ABC dipeptide transporter periplasmic ligand binding protein; family 5 extracellular solute-binding protein complement(4203597..4205240) Burkholderia phytofirmans PsJN 6282021 YP_001897368.1 CDS Bphyt_3756 NC_010681.1 4205541 4206371 R KEGG: bxe:Bxe_A0180 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase complement(4205541..4206371) Burkholderia phytofirmans PsJN 6282022 YP_001897369.1 CDS Bphyt_3757 NC_010681.1 4206383 4206736 R PFAM: membrane protein of unknown function; KEGG: bxe:Bxe_A0179 hypothetical protein; hypothetical protein complement(4206383..4206736) Burkholderia phytofirmans PsJN 6281852 YP_001897370.1 CDS Bphyt_3758 NC_010681.1 4206866 4208287 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(4206866..4208287) Burkholderia phytofirmans PsJN 6281853 YP_001897371.1 CDS Bphyt_3759 NC_010681.1 4208580 4209356 R PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A0177 glycosyl transferase; family 2 glycosyl transferase complement(4208580..4209356) Burkholderia phytofirmans PsJN 6281854 YP_001897372.1 CDS Bphyt_3760 NC_010681.1 4209531 4210493 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A0176 LysR family transcriptional regulator; LysR family transcriptional regulator 4209531..4210493 Burkholderia phytofirmans PsJN 6281855 YP_001897373.1 CDS Bphyt_3761 NC_010681.1 4210553 4212307 R PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_A0175 outer membrane porin, OmpA/MotB family; OmpA/MotB domain-containing protein complement(4210553..4212307) Burkholderia phytofirmans PsJN 6281856 YP_001897374.1 CDS Bphyt_3762 NC_010681.1 4212480 4214138 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bxe:Bxe_A0174 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(4212480..4214138) Burkholderia phytofirmans PsJN 6281857 YP_001897375.1 CDS Bphyt_3763 NC_010681.1 4214447 4216132 D PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_A0173 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4214447..4216132 Burkholderia phytofirmans PsJN 6283194 YP_001897376.1 CDS Bphyt_3764 NC_010681.1 4216245 4217663 D PFAM: aldehyde dehydrogenase_; KEGG: bxe:Bxe_A0172 coniferyl aldehyde dehydrogenase; aldehyde dehydrogenase 4216245..4217663 Burkholderia phytofirmans PsJN 6283195 YP_001897377.1 CDS Bphyt_3765 NC_010681.1 4217667 4218026 R KEGG: bxe:Bxe_A0171 flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB complement(4217667..4218026) Burkholderia phytofirmans PsJN 6283196 YP_001897378.1 CDS Bphyt_3766 NC_010681.1 4218026 4219459 R KEGG: bxe:Bxe_A0170 hypothetical protein; hypothetical protein complement(4218026..4219459) Burkholderia phytofirmans PsJN 6283197 YP_001897379.1 CDS Bphyt_3767 NC_010681.1 4219551 4219877 R KEGG: bxe:Bxe_A0169 flagellar protein FliT; flagellar protein FliT complement(4219551..4219877) Burkholderia phytofirmans PsJN 6283198 YP_001897380.1 CDS Bphyt_3768 NC_010681.1 4219874 4220308 R PFAM: flagellar protein FliS; KEGG: bxe:Bxe_A0168 flagellar protein FliS; flagellar protein FliS complement(4219874..4220308) Burkholderia phytofirmans PsJN 6283199 YP_001897381.1 CDS Bphyt_3769 NC_010681.1 4220525 4220860 R TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: bxe:Bxe_A0167 flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE complement(4220525..4220860) Burkholderia phytofirmans PsJN 6283200 YP_001897382.1 CDS fliF NC_010681.1 4221096 4222907 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 4221096..4222907 Burkholderia phytofirmans PsJN 6284423 YP_001897383.1 CDS fliG NC_010681.1 4222897 4223892 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 4222897..4223892 Burkholderia phytofirmans PsJN 6284424 YP_001897384.1 CDS fliH NC_010681.1 4223879 4224562 D binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 4223879..4224562 Burkholderia phytofirmans PsJN 6284425 YP_001897385.1 CDS Bphyt_3773 NC_010681.1 4224556 4226205 D KEGG: bxe:Bxe_A0163 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; SMART: ATPase AAA; flagellar protein export ATPase FliI 4224556..4226205 Burkholderia phytofirmans PsJN 6284426 YP_001897386.1 CDS Bphyt_3774 NC_010681.1 4226208 4226657 D TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: bxe:Bxe_A0162 flagellar FliJ protein; flagellar export protein FliJ 4226208..4226657 Burkholderia phytofirmans PsJN 6284427 YP_001897387.1 CDS Bphyt_3775 NC_010681.1 4226728 4228221 D PFAM: flagellar hook-length control protein; KEGG: bxe:Bxe_A0161 flagellar hook-length control protein; flagellar hook-length control protein 4226728..4228221 Burkholderia phytofirmans PsJN 6284428 YP_001897388.1 CDS fliL NC_010681.1 4228707 4229207 D interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 4228707..4229207 Burkholderia phytofirmans PsJN 6281846 YP_001897389.1 CDS fliM NC_010681.1 4229273 4230271 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 4229273..4230271 Burkholderia phytofirmans PsJN 6281847 YP_001897390.1 CDS Bphyt_3778 NC_010681.1 4230264 4230728 D TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bxe:Bxe_A0157 flagellar motor switch protein FliN; flagellar motor switch protein FliN 4230264..4230728 Burkholderia phytofirmans PsJN 6281848 YP_001897391.1 CDS Bphyt_3779 NC_010681.1 4230725 4231336 D PFAM: flagellar biosynthesis protein FliO; KEGG: bxe:Bxe_A0156 flagellar protein FliO; flagellar biosynthesis protein FliO 4230725..4231336 Burkholderia phytofirmans PsJN 6281849 YP_001897392.1 CDS fliP NC_010681.1 4231336 4232169 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 4231336..4232169 Burkholderia phytofirmans PsJN 6281850 YP_001897393.1 CDS fliQ NC_010681.1 4232219 4232488 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 4232219..4232488 Burkholderia phytofirmans PsJN 6281851 YP_001897394.1 CDS Bphyt_3782 NC_010681.1 4232526 4233308 D TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: bxe:Bxe_A0153 flagellar biosynthesis protein FliR; flagellar biosynthetic protein FliR 4232526..4233308 Burkholderia phytofirmans PsJN 6281587 YP_001897395.1 CDS flgL NC_010681.1 4233406 4234629 R with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL complement(4233406..4234629) Burkholderia phytofirmans PsJN 6281588 YP_001897396.1 CDS flgK NC_010681.1 4234640 4236613 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(4234640..4236613) Burkholderia phytofirmans PsJN 6281589 YP_001897397.1 CDS Bphyt_3785 NC_010681.1 4236882 4237655 R PFAM: type IV pilus assembly PilZ; YcgR family protein; KEGG: bxe:Bxe_A0149 hypothetical protein; YcgR family protein complement(4236882..4237655) Burkholderia phytofirmans PsJN 6281590 YP_001897398.1 CDS flgJ NC_010681.1 4237993 4238991 R Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ complement(4237993..4238991) Burkholderia phytofirmans PsJN 6281591 YP_001897399.1 CDS flgI NC_010681.1 4239004 4240191 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein complement(4239004..4240191) Burkholderia phytofirmans PsJN 6281592 YP_001897400.1 CDS flgH NC_010681.1 4240194 4240895 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Burkholderia thailandensis has 2 copies of this and other flagella genes; flagellar basal body L-ring protein complement(4240194..4240895) Burkholderia phytofirmans PsJN 6281593 YP_001897401.1 CDS flgG NC_010681.1 4240929 4241717 R makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG complement(4240929..4241717) Burkholderia phytofirmans PsJN 6283245 YP_001897402.1 CDS flgF NC_010681.1 4241730 4242488 R FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF complement(4241730..4242488) Burkholderia phytofirmans PsJN 6283246 YP_001897403.1 CDS Bphyt_3791 NC_010681.1 4242509 4244020 R PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: bxe:Bxe_A0143 flagellar hook protein FlgE; hypothetical protein complement(4242509..4244020) Burkholderia phytofirmans PsJN 6283247 YP_001897404.1 CDS flgD NC_010681.1 4244064 4244786 R acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein complement(4244064..4244786) Burkholderia phytofirmans PsJN 6283248 YP_001897405.1 CDS flgC NC_010681.1 4244797 4245222 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(4244797..4245222) Burkholderia phytofirmans PsJN 6283249 YP_001897406.1 CDS flgB NC_010681.1 4245315 4245809 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB complement(4245315..4245809) Burkholderia phytofirmans PsJN 6283250 YP_001897407.1 CDS Bphyt_3795 NC_010681.1 4246027 4247541 D TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: bxe:Bxe_A0139 flagella basal body P-ring formation protein; flagella basal body P-ring formation protein FlgA 4246027..4247541 Burkholderia phytofirmans PsJN 6280920 YP_001897408.1 CDS Bphyt_3796 NC_010681.1 4247743 4248096 D PFAM: anti-sigma-28 factor FlgM family protein; KEGG: bxe:Bxe_A0138 anti-sigma-28 factor, FlgM; anti-sigma-28 factor FlgM 4247743..4248096 Burkholderia phytofirmans PsJN 6280921 YP_001897409.1 CDS Bphyt_3797 NC_010681.1 4248191 4248637 D PFAM: FlgN family protein; KEGG: bxe:Bxe_A0137 flagella synthesis protein; FlgN family protein 4248191..4248637 Burkholderia phytofirmans PsJN 6280922 YP_001897410.1 CDS Bphyt_3798 NC_010681.1 4248946 4249128 D PFAM: YcfA family protein; KEGG: bxe:Bxe_A0136 hypothetical protein; hypothetical protein 4248946..4249128 Burkholderia phytofirmans PsJN 6280923 YP_001897411.1 CDS Bphyt_3799 NC_010681.1 4249125 4249535 D PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; KEGG: bxe:Bxe_A0135 transcriptional regulator, CopG family; hypothetical protein 4249125..4249535 Burkholderia phytofirmans PsJN 6280924 YP_001897412.1 CDS fliA NC_010681.1 4249596 4250330 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor complement(4249596..4250330) Burkholderia phytofirmans PsJN 6280925 YP_001897413.1 CDS Bphyt_3801 NC_010681.1 4250359 4251186 R KEGG: bxe:Bxe_A0133 flagellar biosynthesis protein FlhG; flagellar biosynthesis protein FlhG complement(4250359..4251186) Burkholderia phytofirmans PsJN 6280926 YP_001897414.1 CDS flhF NC_010681.1 4251221 4253095 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(4251221..4253095) Burkholderia phytofirmans PsJN 6283207 YP_001897415.1 CDS flhA NC_010681.1 4253475 4255577 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(4253475..4255577) Burkholderia phytofirmans PsJN 6283208 YP_001897416.1 CDS flhB NC_010681.1 4255574 4256785 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB complement(4255574..4256785) Burkholderia phytofirmans PsJN 6283209 YP_001897417.1 CDS Bphyt_3805 NC_010681.1 4257029 4258318 R KEGG: bxe:Bxe_A0128 hypothetical protein; hypothetical protein complement(4257029..4258318) Burkholderia phytofirmans PsJN 6283210 YP_001897418.1 CDS Bphyt_3806 NC_010681.1 4258334 4258879 R KEGG: bxe:Bxe_A0127 hypothetical protein; hypothetical protein complement(4258334..4258879) Burkholderia phytofirmans PsJN 6283211 YP_001897419.1 CDS Bphyt_3807 NC_010681.1 4259168 4259878 R cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ complement(4259168..4259878) Burkholderia phytofirmans PsJN 6283212 YP_001897420.1 CDS Bphyt_3808 NC_010681.1 4259880 4260275 R PFAM: response regulator receiver; KEGG: bxe:Bxe_A0125 response regulator receiver domain protein(CheY); response regulator receiver protein complement(4259880..4260275) Burkholderia phytofirmans PsJN 6281423 YP_001897421.1 CDS Bphyt_3809 NC_010681.1 4260362 4261450 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(4260362..4261450) Burkholderia phytofirmans PsJN 6281424 YP_001897422.1 CDS Bphyt_3810 NC_010681.1 4261456 4262271 R stimulates methylation of MCP proteins; catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(4261456..4262271) Burkholderia phytofirmans PsJN 6281425 YP_001897423.1 CDS Bphyt_3811 NC_010681.1 4262268 4263224 R PFAM: MCP methyltransferase CheR-type; KEGG: bxe:Bxe_A0122 MCP methyltransferase, CheR-type; CheR-type MCP methyltransferase complement(4262268..4263224) Burkholderia phytofirmans PsJN 6281426 YP_001897424.1 CDS Bphyt_3812 NC_010681.1 4263221 4263412 R hypothetical protein complement(4263221..4263412) Burkholderia phytofirmans PsJN 6281427 YP_001897425.1 CDS Bphyt_3813 NC_010681.1 4263429 4265282 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_A0121 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4263429..4265282) Burkholderia phytofirmans PsJN 6281428 YP_001897426.1 CDS Bphyt_3814 NC_010681.1 4265326 4265862 R PFAM: CheW domain protein; KEGG: bxe:Bxe_A0120 CheW protein; CheW protein complement(4265326..4265862) Burkholderia phytofirmans PsJN 6281594 YP_001897427.1 CDS Bphyt_3815 NC_010681.1 4265932 4268232 R PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheY binding; KEGG: bxe:Bxe_A0119 CheA signal transduction histidine kinases(STHK); CheA signal transduction histidine kinase complement(4265932..4268232) Burkholderia phytofirmans PsJN 6281595 YP_001897428.1 CDS Bphyt_3816 NC_010681.1 4268319 4268696 R PFAM: response regulator receiver; KEGG: bxe:Bxe_A0118 response regulator receiver domain protein(CheY); response regulator receiver protein complement(4268319..4268696) Burkholderia phytofirmans PsJN 6281596 YP_001897429.1 CDS motB NC_010681.1 4268782 4269789 R with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB complement(4268782..4269789) Burkholderia phytofirmans PsJN 6281597 YP_001897430.1 CDS Bphyt_3818 NC_010681.1 4269811 4270671 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(4269811..4270671) Burkholderia phytofirmans PsJN 6281598 YP_001897431.1 CDS Bphyt_3819 NC_010681.1 4270893 4271453 R With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC complement(4270893..4271453) Burkholderia phytofirmans PsJN 6281599 YP_001897432.1 CDS Bphyt_3820 NC_010681.1 4271505 4271825 R with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD complement(4271505..4271825) Burkholderia phytofirmans PsJN 6281600 YP_001897433.1 CDS Bphyt_3821 NC_010681.1 4272535 4273599 D PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A0113 glycosyltransferase; group 1 glycosyl transferase 4272535..4273599 Burkholderia phytofirmans PsJN 6282504 YP_001897434.1 CDS Bphyt_3822 NC_010681.1 4273898 4274200 R PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_A0112 HNS-like transcriptional regulator; histone family protein nucleoid-structuring protein H-NS complement(4273898..4274200) Burkholderia phytofirmans PsJN 6282505 YP_001897435.1 CDS Bphyt_3823 NC_010681.1 4274490 4275230 D porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 4274490..4275230 Burkholderia phytofirmans PsJN 6282506 YP_001897436.1 CDS Bphyt_3824 NC_010681.1 4275382 4276077 D KEGG: bxe:Bxe_A0110 hypothetical protein; hypothetical protein 4275382..4276077 Burkholderia phytofirmans PsJN 6282507 YP_001897437.1 CDS Bphyt_3825 NC_010681.1 4276364 4276675 D KEGG: bxe:Bxe_A0109 hypothetical protein; hypothetical protein 4276364..4276675 Burkholderia phytofirmans PsJN 6282508 YP_001897438.1 CDS Bphyt_3826 NC_010681.1 4276839 4277660 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: bxe:Bxe_A0108 HAD-superfamily hydrolase, Cof subfamily; cof family hydrolase complement(4276839..4277660) Burkholderia phytofirmans PsJN 6282509 YP_001897439.1 CDS Bphyt_3827 NC_010681.1 4277792 4278673 R PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: bxe:Bxe_A0107 aryl-alcohol dehydrogenase; BadF/BadG/BcrA/BcrD type ATPase complement(4277792..4278673) Burkholderia phytofirmans PsJN 6280805 YP_001897440.1 CDS Bphyt_3828 NC_010681.1 4278814 4279410 D PFAM: methyladenine glycosylase; KEGG: bxe:Bxe_A0106 DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I 4278814..4279410 Burkholderia phytofirmans PsJN 6280806 YP_001897441.1 CDS Bphyt_3829 NC_010681.1 4279813 4280238 D KEGG: rso:RSc3072 hypothetical protein; hypothetical protein 4279813..4280238 Burkholderia phytofirmans PsJN 6280807 YP_001897442.1 CDS Bphyt_3830 NC_010681.1 4280458 4280670 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(4280458..4280670) Burkholderia phytofirmans PsJN 6280808 YP_001897443.1 CDS Bphyt_3831 NC_010681.1 4281033 4281974 R PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A0104 aldo/keto reductase; aldo/keto reductase complement(4281033..4281974) Burkholderia phytofirmans PsJN 6280809 YP_001897444.1 CDS Bphyt_3832 NC_010681.1 4282243 4283388 D structural flagella protein; Vibrio contains multiple flagellin genes usually localized into two region on the chromosome, flaAC and flaCEDB in V. cholerae, flaFBA and flaCDE in V. parahemolyticus; FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus; flagellin 4282243..4283388 Burkholderia phytofirmans PsJN 6280810 YP_001897445.1 CDS Bphyt_3833 NC_010681.1 4283546 4285063 D PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: bxe:Bxe_A0102 FliD; flagellar hook-associated protein; flagellar hook-associated 2 domain-containing protein 4283546..4285063 Burkholderia phytofirmans PsJN 6280811 YP_001897446.1 CDS Bphyt_3834 NC_010681.1 4285067 4285381 D KEGG: bxe:Bxe_A0101 hypothetical protein; hypothetical protein 4285067..4285381 Burkholderia phytofirmans PsJN 6284644 YP_001897447.1 CDS Bphyt_3835 NC_010681.1 4285645 4288017 D PFAM: hypothetical protein; Tetratricopeptide TPR_4; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: bxe:Bxe_A0100 TPR domain protein; hypothetical protein 4285645..4288017 Burkholderia phytofirmans PsJN 6284645 YP_001897448.1 CDS Bphyt_3836 NC_010681.1 4288014 4289171 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bxe:Bxe_A0099 transferase; DegT/DnrJ/EryC1/StrS aminotransferase 4288014..4289171 Burkholderia phytofirmans PsJN 6284646 YP_001897449.1 CDS Bphyt_3837 NC_010681.1 4289174 4290214 D PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bxe:Bxe_A0098 3-oxoacyl-(acyl-carrier protein) synthase; beta-ketoacyl-acyl-carrier-protein synthase I 4289174..4290214 Burkholderia phytofirmans PsJN 6284647 YP_001897450.1 CDS Bphyt_3838 NC_010681.1 4290226 4290453 D KEGG: bxe:Bxe_A0097 acyl carrier protein; acyl carrier protein 4290226..4290453 Burkholderia phytofirmans PsJN 6284648 YP_001897451.1 CDS Bphyt_3839 NC_010681.1 4290464 4291528 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bxe:Bxe_A0096 3-oxoacyl-(acyl-carrier protein) synthase; beta-ketoacyl-acyl-carrier-protein synthase I 4290464..4291528 Burkholderia phytofirmans PsJN 6284649 YP_001897452.1 CDS Bphyt_3840 NC_010681.1 4291525 4292289 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A0095 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4291525..4292289 Burkholderia phytofirmans PsJN 6282604 YP_001897453.1 CDS Bphyt_3841 NC_010681.1 4292289 4292921 D KEGG: bxe:Bxe_A0094 acetyltransferase; acetyltransferase 4292289..4292921 Burkholderia phytofirmans PsJN 6282605 YP_001897454.1 CDS Bphyt_3842 NC_010681.1 4292923 4293966 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_A0093 benzoate 1,2-dioxygenase subunit alpha; Rieske (2Fe-2S) domain-containing protein 4292923..4293966 Burkholderia phytofirmans PsJN 6282606 YP_001897455.1 CDS Bphyt_3843 NC_010681.1 4293966 4294667 D KEGG: sus:acid_2244 hypothetical protein; hypothetical protein 4293966..4294667 Burkholderia phytofirmans PsJN 6282607 YP_001897456.1 CDS Bphyt_3844 NC_010681.1 4294714 4295292 D PFAM: methyltransferase type 11; KEGG: ava:Ava_2391 hypothetical protein; type 11 methyltransferase 4294714..4295292 Burkholderia phytofirmans PsJN 6282608 YP_001897457.1 CDS Bphyt_3845 NC_010681.1 4295301 4296104 D PFAM: phytanoyl-CoA dioxygenase; KEGG: sma:SAV2991 hypothetical protein; phytanoyl-CoA dioxygenase 4295301..4296104 Burkholderia phytofirmans PsJN 6282609 YP_001897458.1 CDS Bphyt_3846 NC_010681.1 4296164 4297168 R KEGG: bxe:Bxe_A0092 hypothetical protein; hypothetical protein complement(4296164..4297168) Burkholderia phytofirmans PsJN 6283180 YP_001897459.1 CDS Bphyt_3847 NC_010681.1 4297464 4298531 D KEGG: bxe:Bxe_A0090 nonspecific acid phosphatase precursor; nonspecific acid phosphatase 4297464..4298531 Burkholderia phytofirmans PsJN 6283181 YP_001897460.1 CDS Bphyt_3848 NC_010681.1 4298602 4299612 R PFAM: sodium/calcium exchanger membrane region; KEGG: bxe:Bxe_A0089 sodium/calcium antiporter; sodium/calcium exchanger membrane protein complement(4298602..4299612) Burkholderia phytofirmans PsJN 6283182 YP_001897461.1 CDS Bphyt_3849 NC_010681.1 4299979 4300500 R KEGG: bxe:Bxe_A0088 hypothetical protein; hypothetical protein complement(4299979..4300500) Burkholderia phytofirmans PsJN 6283183 YP_001897462.1 CDS Bphyt_3850 NC_010681.1 4301372 4301641 R hypothetical protein complement(4301372..4301641) Burkholderia phytofirmans PsJN 6283184 YP_001897463.1 CDS Bphyt_3851 NC_010681.1 4301778 4302050 R KEGG: bxe:Bxe_A0087 hypothetical protein; hypothetical protein complement(4301778..4302050) Burkholderia phytofirmans PsJN 6283185 YP_001897464.1 CDS Bphyt_3852 NC_010681.1 4302146 4303153 D PFAM: ATPase AAA; SMART: AAA ATPase; KEGG: bxe:Bxe_A0086 AAA superfamily ATPase; ATPase AAA 4302146..4303153 Burkholderia phytofirmans PsJN 6283186 YP_001897465.1 CDS Bphyt_3853 NC_010681.1 4303234 4305771 D KEGG: bxe:Bxe_A0085 hypothetical protein; hypothetical protein 4303234..4305771 Burkholderia phytofirmans PsJN 6280871 YP_001897466.1 CDS Bphyt_3854 NC_010681.1 4306221 4309976 D KEGG: pst:PSPTO_1851 hypothetical protein; hypothetical protein 4306221..4309976 Burkholderia phytofirmans PsJN 6280872 YP_001897467.1 CDS Bphyt_3855 NC_010681.1 4309987 4310664 R KEGG: bur:Bcep18194_A5707 hypothetical protein; hypothetical protein complement(4309987..4310664) Burkholderia phytofirmans PsJN 6280873 YP_001897468.1 CDS Bphyt_3856 NC_010681.1 4310755 4312524 R KEGG: rme:Rmet_6326 hypothetical protein; hypothetical protein complement(4310755..4312524) Burkholderia phytofirmans PsJN 6280874 YP_001897469.1 CDS Bphyt_3857 NC_010681.1 4312582 4314108 D PFAM: integrase; KEGG: bxe:Bxe_A1791 transposase catalytic subunit; integrase 4312582..4314108 Burkholderia phytofirmans PsJN 6280875 YP_001897470.1 CDS Bphyt_3858 NC_010681.1 4314111 4314899 D PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1792 transposase-related ATP-binding protein; IstB domain-containing protein ATP-binding protein 4314111..4314899 Burkholderia phytofirmans PsJN 6280876 YP_001897471.1 CDS Bphyt_3859 NC_010681.1 4314966 4317170 R KEGG: rme:Rmet_6326 hypothetical protein; hypothetical protein complement(4314966..4317170) Burkholderia phytofirmans PsJN 6282472 YP_001897472.1 CDS Bphyt_3860 NC_010681.1 4317671 4318537 D hypothetical protein 4317671..4318537 Burkholderia phytofirmans PsJN 6282473 YP_001897473.1 CDS Bphyt_3862 NC_010681.1 4319169 4319753 D KEGG: rme:Rmet_2666 hypothetical protein; hypothetical protein 4319169..4319753 Burkholderia phytofirmans PsJN 6282475 YP_001897474.1 CDS Bphyt_3863 NC_010681.1 4319835 4320368 R KEGG: bcm:Bcenmc03_0800 hypothetical protein; hypothetical protein complement(4319835..4320368) Burkholderia phytofirmans PsJN 6282476 YP_001897475.1 CDS Bphyt_3864 NC_010681.1 4320442 4320945 R KEGG: bps:BPSL0551 hypothetical protein; hypothetical protein complement(4320442..4320945) Burkholderia phytofirmans PsJN 6282477 YP_001897476.1 CDS Bphyt_3865 NC_010681.1 4320982 4321275 R KEGG: reu:Reut_C5923 hypothetical protein; hypothetical protein complement(4320982..4321275) Burkholderia phytofirmans PsJN 6282478 YP_001897477.1 CDS Bphyt_3866 NC_010681.1 4321841 4322314 R hypothetical protein complement(4321841..4322314) Burkholderia phytofirmans PsJN 6281963 YP_001897478.1 CDS Bphyt_3867 NC_010681.1 4322720 4322962 R KEGG: bxe:Bxe_A0246 hypothetical protein; hypothetical protein complement(4322720..4322962) Burkholderia phytofirmans PsJN 6281964 YP_001897479.1 CDS Bphyt_3868 NC_010681.1 4322946 4323311 R KEGG: bch:Bcen2424_0216 hypothetical protein; hypothetical protein complement(4322946..4323311) Burkholderia phytofirmans PsJN 6281965 YP_001897480.1 CDS Bphyt_3869 NC_010681.1 4323460 4324032 R KEGG: bvi:Bcep1808_0164 hypothetical protein; hypothetical protein complement(4323460..4324032) Burkholderia phytofirmans PsJN 6281966 YP_001897481.1 CDS Bphyt_3870 NC_010681.1 4324190 4324699 D KEGG: bvi:Bcep1808_0163 hypothetical protein; hypothetical protein 4324190..4324699 Burkholderia phytofirmans PsJN 6281967 YP_001897482.1 CDS Bphyt_3871 NC_010681.1 4324708 4325184 D KEGG: bvi:Bcep1808_0162 hypothetical protein; hypothetical protein 4324708..4325184 Burkholderia phytofirmans PsJN 6281968 YP_001897483.1 CDS Bphyt_3872 NC_010681.1 4326072 4326908 D KEGG: bcn:Bcen_2894 hypothetical protein; hypothetical protein 4326072..4326908 Burkholderia phytofirmans PsJN 6283136 YP_001897484.1 CDS Bphyt_3873 NC_010681.1 4326918 4329800 D PFAM: integrase; TnsA endonuclease; KEGG: bvi:Bcep1808_0159 integrase, catalytic region; integrase 4326918..4329800 Burkholderia phytofirmans PsJN 6283137 YP_001897485.1 CDS Bphyt_3874 NC_010681.1 4329815 4330870 D SMART: ATPase AAA; KEGG: bvi:Bcep1808_0158 hypothetical protein; ATPase AAA 4329815..4330870 Burkholderia phytofirmans PsJN 6283138 YP_001897486.1 CDS Bphyt_3875 NC_010681.1 4330867 4332297 D KEGG: bch:Bcen2424_0210 hypothetical protein; hypothetical protein 4330867..4332297 Burkholderia phytofirmans PsJN 6283139 YP_001897487.1 CDS Bphyt_3876 NC_010681.1 4332751 4333653 D PFAM: cytochrome C class I; KEGG: bxe:Bxe_A0061 cytochrome c family protein; cytochrome C class I 4332751..4333653 Burkholderia phytofirmans PsJN 6283141 YP_001897488.1 CDS Bphyt_3877 NC_010681.1 4333777 4335867 R PFAM: UvrD/REP helicase; KEGG: bxe:Bxe_A0060 ATP-dependent DNA helicase Rep; UvrD/REP helicase complement(4333777..4335867) Burkholderia phytofirmans PsJN 6280877 YP_001897489.1 CDS Bphyt_3878 NC_010681.1 4336183 4337232 D PFAM: semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; oxidoreductase domain; KEGG: bxe:Bxe_A0059 oxidoreductase; oxidoreductase domain-containing protein 4336183..4337232 Burkholderia phytofirmans PsJN 6280878 YP_001897490.1 CDS Bphyt_3879 NC_010681.1 4337432 4337782 D KEGG: bxe:Bxe_A0058 lipoprotein; lipoprotein 4337432..4337782 Burkholderia phytofirmans PsJN 6280879 YP_001897491.1 CDS gcvT NC_010681.1 4338307 4339425 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 4338307..4339425 Burkholderia phytofirmans PsJN 6280880 YP_001897492.1 CDS Bphyt_3881 NC_010681.1 4339489 4339869 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 4339489..4339869 Burkholderia phytofirmans PsJN 6282816 YP_001897493.1 CDS Bphyt_3882 NC_010681.1 4339951 4342887 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 4339951..4342887 Burkholderia phytofirmans PsJN 6282817 YP_001897494.1 CDS Bphyt_3883 NC_010681.1 4343027 4344157 D KEGG: bxe:Bxe_A0053 hypothetical protein; hypothetical protein 4343027..4344157 Burkholderia phytofirmans PsJN 6282818 YP_001897495.1 CDS Bphyt_3884 NC_010681.1 4344188 4345576 D KEGG: bxe:Bxe_A0052 iron-sulfur-dependent L-serine dehydratase single chain form; TIGRFAM: L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 4344188..4345576 Burkholderia phytofirmans PsJN 6282819 YP_001897496.1 CDS Bphyt_3885 NC_010681.1 4345796 4347514 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_A0051 acetolactate synthase 2 catalytic subunit; thiamine pyrophosphate protein 4345796..4347514 Burkholderia phytofirmans PsJN 6282820 YP_001897497.1 CDS Bphyt_3886 NC_010681.1 4347659 4348807 R PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A0050 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched chain amino acid ABC transporter substrate-binding protein complement(4347659..4348807) Burkholderia phytofirmans PsJN 6282404 YP_001897498.1 CDS putA NC_010681.1 4348896 4352825 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; multifunctional functional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(4348896..4352825) Burkholderia phytofirmans PsJN 6282405 YP_001897499.1 CDS Bphyt_3888 NC_010681.1 4353138 4353308 D hypothetical protein 4353138..4353308 Burkholderia phytofirmans PsJN 6282406 YP_001897500.1 CDS Bphyt_3889 NC_010681.1 4353562 4355808 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(4353562..4355808) Burkholderia phytofirmans PsJN 6282407 YP_001897501.1 CDS hemE NC_010681.1 4356274 4357374 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(4356274..4357374) Burkholderia phytofirmans PsJN 6282408 YP_001897502.1 CDS Bphyt_3891 NC_010681.1 4357593 4358390 D PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_A0043 prephenate dehydratase; arogenate dehydratase 4357593..4358390 Burkholderia phytofirmans PsJN 6282409 YP_001897503.1 CDS Bphyt_3892 NC_010681.1 4359280 4361010 R PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A0042 acyl-CoA synthetase; AMP-binding domain-containing protein complement(4359280..4361010) Burkholderia phytofirmans PsJN 6282410 YP_001897504.1 CDS atpC NC_010681.1 4361246 4361671 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(4361246..4361671) Burkholderia phytofirmans PsJN 6281017 YP_001897505.1 CDS Bphyt_3894 NC_010681.1 4361881 4363275 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(4361881..4363275) Burkholderia phytofirmans PsJN 6281018 YP_001897506.1 CDS Bphyt_3895 NC_010681.1 4363392 4364276 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(4363392..4364276) Burkholderia phytofirmans PsJN 6281019 YP_001897507.1 CDS Bphyt_3896 NC_010681.1 4364368 4365909 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(4364368..4365909) Burkholderia phytofirmans PsJN 6281020 YP_001897508.1 CDS Bphyt_3897 NC_010681.1 4365968 4366507 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the subunit delta is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(4365968..4366507) Burkholderia phytofirmans PsJN 6281021 YP_001897509.1 CDS Bphyt_3898 NC_010681.1 4366510 4366980 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(4366510..4366980) Burkholderia phytofirmans PsJN 6281022 YP_001897510.1 CDS Bphyt_3899 NC_010681.1 4367119 4367388 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(4367119..4367388) Burkholderia phytofirmans PsJN 6281023 YP_001897511.1 CDS Bphyt_3900 NC_010681.1 4367483 4368334 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(4367483..4368334) Burkholderia phytofirmans PsJN 6281858 YP_001897512.1 CDS Bphyt_3901 NC_010681.1 4368498 4369043 R PFAM: ATP synthase I chain; KEGG: bxe:Bxe_A0033 ATP synthase protein I; ATP synthase I subunit complement(4368498..4369043) Burkholderia phytofirmans PsJN 6281859 YP_001897513.1 CDS Bphyt_3902 NC_010681.1 4369905 4370792 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bxe:Bxe_A0031 ParB-like partition protein; parB-like partition protein complement(4369905..4370792) Burkholderia phytofirmans PsJN 6281860 YP_001897514.1 CDS Bphyt_3903 NC_010681.1 4370811 4371602 R PFAM: cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_A0030 chromosome partitioning protein ParA; cobyrinic acid ac-diamide synthase complement(4370811..4371602) Burkholderia phytofirmans PsJN 6281861 YP_001897515.1 CDS gidB NC_010681.1 4371698 4372381 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(4371698..4372381) Burkholderia phytofirmans PsJN 6281862 YP_001897516.1 CDS Bphyt_3905 NC_010681.1 4372378 4374336 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(4372378..4374336) Burkholderia phytofirmans PsJN 6281863 YP_001897517.1 CDS Bphyt_3906 NC_010681.1 4374509 4375261 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A0027 ABC branched chain amino acid family transporter ATPase subunit; branched-chain amino acid ABC transporter ATPase complement(4374509..4375261) Burkholderia phytofirmans PsJN 6284706 YP_001897518.1 CDS Bphyt_3907 NC_010681.1 4375273 4377057 R PFAM: inner-membrane translocator; ABC transporter related; SMART: ATPase AAA; KEGG: bxe:Bxe_A0026 ABC branched chain amino acid family transporter fused ATPase and inner membrane subunits; branched-chain amino acid ABC transporter ATPase/inner membrane protein complement(4375273..4377057) Burkholderia phytofirmans PsJN 6284707 YP_001897519.1 CDS Bphyt_3908 NC_010681.1 4377062 4378117 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0025 ABC branched chain amino acid family transporter inner membrane subunit; branched-chain amino acid ABC transporter inner membrane protein complement(4377062..4378117) Burkholderia phytofirmans PsJN 6284708 YP_001897520.1 CDS Bphyt_3909 NC_010681.1 4378322 4379482 R PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A0024 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched chain amino acid ABC transporter substrate-binding protein complement(4378322..4379482) Burkholderia phytofirmans PsJN 6284709 YP_001897521.1 CDS Bphyt_3910 NC_010681.1 4379853 4381019 R PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A0023 ABC branched chain amino acid family transporter periplasmic ligand binding protein; branched chain amino acid ABC transporter substrate-binding protein complement(4379853..4381019) Burkholderia phytofirmans PsJN 6284710 YP_001897522.1 CDS Bphyt_3911 NC_010681.1 4381538 4382509 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0021 ABC branched chain amino acid family transporter inner membrane subunit; branched-chain amino acid ABC transporter inner membrane protein complement(4381538..4382509) Burkholderia phytofirmans PsJN 6284711 YP_001897523.1 CDS Bphyt_3912 NC_010681.1 4382509 4383393 R PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0020 ABC branched chain amino acid family transporter inner membrane subunit; branched-chain amino acid ABC transporter inner membrane protein complement(4382509..4383393) Burkholderia phytofirmans PsJN 6284712 YP_001897524.1 CDS Bphyt_3913 NC_010681.1 4383582 4384796 R PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A0019 ABC branched-chain amino acid family transporter periplasmic ligand binding protein; branched-chain amino acid ABC transporter substrate-binding protein complement(4383582..4384796) Burkholderia phytofirmans PsJN 6283322 YP_001897525.1 CDS Bphyt_3914 NC_010681.1 4384848 4385606 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A0018 ABC branched chain amino acid family transporter ATPase subunit; branched-chain amino acid ABC transporter ATPase complement(4384848..4385606) Burkholderia phytofirmans PsJN 6283323 YP_001897526.1 CDS Bphyt_3915 NC_010681.1 4385603 4386382 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bxe:Bxe_A0017 ABC branched chain amino acid family transporter ATPase subunit; branched-chain amino acid ABC transporter ATPase complement(4385603..4386382) Burkholderia phytofirmans PsJN 6283324 YP_001897527.1 CDS Bphyt_3916 NC_010681.1 4386681 4388393 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bxe:Bxe_A0016 oxidoreductase, GMC family; glucose-methanol-choline oxidoreductase complement(4386681..4388393) Burkholderia phytofirmans PsJN 6283325 YP_001897528.1 CDS Bphyt_3917 NC_010681.1 4388532 4390070 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase_; KEGG: bxe:Bxe_A0015 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(4388532..4390070) Burkholderia phytofirmans PsJN 6283326 YP_001897529.1 CDS Bphyt_3918 NC_010681.1 4390216 4391115 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A0014 LysR family transcriptional regulator; LysR family transcriptional regulator 4390216..4391115 Burkholderia phytofirmans PsJN 6283327 YP_001897530.1 CDS Bphyt_3919 NC_010681.1 4391431 4391967 D PFAM: adenylate cyclase; KEGG: bxe:Bxe_A0013 adenylate cyclase; adenylate cyclase 4391431..4391967 Burkholderia phytofirmans PsJN 6284077 YP_001897531.1 CDS Bphyt_3920 NC_010681.1 4392021 4392512 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_A0012 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(4392021..4392512) Burkholderia phytofirmans PsJN 6284078 YP_001897532.1 CDS phhA NC_010681.1 4392660 4393550 D phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 4392660..4393550 Burkholderia phytofirmans PsJN 6284079 YP_001897533.1 CDS phhB NC_010681.1 4393645 4393935 D 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 4393645..4393935 Burkholderia phytofirmans PsJN 6284080 YP_001897534.1 CDS Bphyt_3923 NC_010681.1 4394041 4394265 R KEGG: bxe:Bxe_A0009 hypothetical protein; hypothetical protein complement(4394041..4394265) Burkholderia phytofirmans PsJN 6284081 YP_001897535.1 CDS Bphyt_3924 NC_010681.1 4394505 4395191 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bxe:Bxe_A0008 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 4394505..4395191 Burkholderia phytofirmans PsJN 6284082 YP_001897536.1 CDS Bphyt_3925 NC_010681.1 4395326 4396831 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bxe:Bxe_A0007 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4395326..4396831 Burkholderia phytofirmans PsJN 6284083 YP_001897537.1 CDS Bphyt_3926 NC_010681.1 4396898 4397422 R PFAM: nuclear protein SET; KEGG: bxe:Bxe_A0006 hypothetical protein; nuclear protein SET complement(4396898..4397422) Burkholderia phytofirmans PsJN 6280881 YP_001897538.1 CDS Bphyt_3927 NC_010681.1 4397641 4398753 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_A0005 NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase complement(4397641..4398753) Burkholderia phytofirmans PsJN 6280882 YP_001897539.1 CDS Bphyt_3928 NC_010681.1 4398836 4399549 R Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase complement(4398836..4399549) Burkholderia phytofirmans PsJN 6280883 YP_001897540.1 CDS Bphyt_3929 NC_010681.1 4399677 4400315 R PFAM: regulatory protein MarR; regulatory protein ArsR; KEGG: bxe:Bxe_A0003 MarR family transcriptional regulator; MarR family transcriptional regulator complement(4399677..4400315) Burkholderia phytofirmans PsJN 6280884 YP_001897541.1 CDS Bphyt_3930 NC_010681.1 4400852 4401967 R ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase complement(4400852..4401967) Burkholderia phytofirmans PsJN 6280885 YP_001897542.1 CDS Bphyt_3931 NC_010681.1 4402099 4403301 R PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_A0001 hypothetical protein; sodium/hydrogen exchanger complement(4402099..4403301) Burkholderia phytofirmans PsJN 6280886 YP_001897543.1 CDS mnmC NC_010681.1 4404148 4406118 R catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase complement(4404148..4406118) Burkholderia phytofirmans PsJN 6282042 YP_001897544.1 CDS Bphyt_3933 NC_010681.1 4406613 4406891 D PFAM: histone family protein DNA-binding protein; KEGG: bxe:Bxe_A4504 DNA-binding protein HU-alpha; histone family protein DNA-binding protein 4406613..4406891 Burkholderia phytofirmans PsJN 6282043 YP_001897545.1 CDS Bphyt_3934 NC_010681.1 4407023 4408339 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_A4503 cobalamin synthesis protein/P47K; cobalamin synthesis protein P47K complement(4407023..4408339) Burkholderia phytofirmans PsJN 6282044 YP_001897546.1 CDS Bphyt_3935 NC_010681.1 4408482 4408928 R PFAM: lytic transglycosylase catalytic; KEGG: bxe:Bxe_A4502 hypothetical protein; lytic transglycosylase complement(4408482..4408928) Burkholderia phytofirmans PsJN 6282045 YP_001897547.1 CDS Bphyt_3936 NC_010681.1 4409429 4411804 D TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: bxe:Bxe_A4501 general secretory pathway protein D; general secretion pathway protein D 4409429..4411804 Burkholderia phytofirmans PsJN 6282046 YP_001897548.1 CDS Bphyt_3937 NC_010681.1 4411891 4413378 D KEGG: bxe:Bxe_A4500 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: ATPase AAA; general secretory pathway protein E 4411891..4413378 Burkholderia phytofirmans PsJN 6282047 YP_001897549.1 CDS Bphyt_3938 NC_010681.1 4413383 4414600 D TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: bxe:Bxe_A4499 general secretory pathway protein F; general secretion pathway protein F 4413383..4414600 Burkholderia phytofirmans PsJN 6282048 YP_001897550.1 CDS Bphyt_3939 NC_010681.1 4414676 4415098 R KEGG: bxe:Bxe_A4498 general secretory pathway protein C; general secretory pathway protein C complement(4414676..4415098) Burkholderia phytofirmans PsJN 6281207 YP_001897551.1 CDS Bphyt_3940 NC_010681.1 4415263 4415727 D TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: bxe:Bxe_A4497 general secretion pathway protein G; general secretion pathway protein G 4415263..4415727 Burkholderia phytofirmans PsJN 6281208 YP_001897552.1 CDS Bphyt_3941 NC_010681.1 4415834 4416415 D TIGRFAM: general secretion pathway protein H; KEGG: bxe:Bxe_A4496 general secretion pathway protein H; general secretion pathway protein H 4415834..4416415 Burkholderia phytofirmans PsJN 6281209 YP_001897553.1 CDS Bphyt_3942 NC_010681.1 4416417 4416833 D TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: bxe:Bxe_A4495 general secretion pathway protein I; general secretion pathway protein I 4416417..4416833 Burkholderia phytofirmans PsJN 6281210 YP_001897554.1 CDS Bphyt_3943 NC_010681.1 4416811 4417497 D KEGG: bxe:Bxe_A4494 general secretory pathway protein J; general secretory pathway protein J 4416811..4417497 Burkholderia phytofirmans PsJN 6281211 YP_001897555.1 CDS Bphyt_3944 NC_010681.1 4417979 4419274 D PFAM: general secretion pathway protein K; KEGG: bxe:Bxe_A4493 general secretory pathway protein K; general secretion pathway protein K 4417979..4419274 Burkholderia phytofirmans PsJN 6281212 YP_001897556.1 CDS Bphyt_3945 NC_010681.1 4419303 4420730 D TIGRFAM: general secretion pathway protein L; PFAM: general secretion pathway L; KEGG: bxe:Bxe_A4492 general secretory pathway protein L; general secretion pathway protein L 4419303..4420730 Burkholderia phytofirmans PsJN 6284720 YP_001897557.1 CDS Bphyt_3946 NC_010681.1 4420727 4421230 D PFAM: general secretion pathway protein M; KEGG: bxe:Bxe_A4491 general secretory pathway protein M; general secretion pathway protein M 4420727..4421230 Burkholderia phytofirmans PsJN 6284721 YP_001897558.1 CDS Bphyt_3947 NC_010681.1 4421265 4422044 D KEGG: bxe:Bxe_A4490 general secretory pathway protein N; general secretory pathway protein N 4421265..4422044 Burkholderia phytofirmans PsJN 6284722 YP_001897559.1 CDS Bphyt_3948 NC_010681.1 4422258 4423829 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bxe:Bxe_A4489 RND efflux system, outer membrane lipoprotein, NodT family; NodT family RND efflux system outer membrane lipoprotein complement(4422258..4423829) Burkholderia phytofirmans PsJN 6284723 YP_001897560.1 CDS Bphyt_3949 NC_010681.1 4424018 4424389 R KEGG: bxe:Bxe_A4488 hypothetical protein; hypothetical protein complement(4424018..4424389) Burkholderia phytofirmans PsJN 6284724 YP_001897561.1 CDS Bphyt_3950 NC_010681.1 4424642 4425184 D PFAM: regulatory protein MarR; KEGG: bxe:Bxe_A4487 MarR family transcriptional regulator; MarR family transcriptional regulator 4424642..4425184 Burkholderia phytofirmans PsJN 6284725 YP_001897562.1 CDS Bphyt_3951 NC_010681.1 4425319 4426881 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4486 major facilitator superfamily (MFS) multidrug efflux pump, EmrB/QacA subfamily; EmrB/QacA subfamily drug resistance transporter 4425319..4426881 Burkholderia phytofirmans PsJN 6283715 YP_001897563.1 CDS Bphyt_3952 NC_010681.1 4426957 4427628 R KEGG: bxe:Bxe_A4485 hypothetical protein; hypothetical protein complement(4426957..4427628) Burkholderia phytofirmans PsJN 6283716 YP_001897564.1 CDS Bphyt_3953 NC_010681.1 4427667 4429283 R involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase complement(4427667..4429283) Burkholderia phytofirmans PsJN 6283717 YP_001897565.1 CDS Bphyt_3954 NC_010681.1 4429605 4430522 R PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: bte:BTH_I0086 DNA-3-methyladenine glycosylase II; AlkA domain-containing protein complement(4429605..4430522) Burkholderia phytofirmans PsJN 6283718 YP_001897566.1 CDS Bphyt_3955 NC_010681.1 4430519 4431694 R KEGG: bxe:Bxe_A4482 transcriptional regulator, AraC family with methyltransferase activity; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; AraC family transcriptional regulator complement(4430519..4431694) Burkholderia phytofirmans PsJN 6283719 YP_001897567.1 CDS Bphyt_3956 NC_010681.1 4432103 4432528 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A4481 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 4432103..4432528 Burkholderia phytofirmans PsJN 6283720 YP_001897568.1 CDS Bphyt_3957 NC_010681.1 4432552 4433106 R PFAM: YaeQ family protein; KEGG: bxe:Bxe_A4480 hypothetical protein; YaeQ family protein complement(4432552..4433106) Burkholderia phytofirmans PsJN 6283721 YP_001897569.1 CDS Bphyt_3958 NC_010681.1 4433248 4434225 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2257 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4433248..4434225) Burkholderia phytofirmans PsJN 6284553 YP_001897570.1 CDS Bphyt_3959 NC_010681.1 4434414 4435862 D PFAM: aldehyde dehydrogenase_; KEGG: aav:Aave_2256 aldehyde dehydrogenase; aldehyde dehydrogenase 4434414..4435862 Burkholderia phytofirmans PsJN 6284554 YP_001897571.1 CDS Bphyt_3960 NC_010681.1 4435989 4436993 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bvi:Bcep1808_3836 periplasmic binding protein/LacI transcriptional regulator; sugar ABC transporter ATPase 4435989..4436993 Burkholderia phytofirmans PsJN 6284555 YP_001897572.1 CDS araG NC_010681.1 4437081 4438628 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 4437081..4438628 Burkholderia phytofirmans PsJN 6284556 YP_001897573.1 CDS araH NC_010681.1 4438704 4439708 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 4438704..4439708 Burkholderia phytofirmans PsJN 6284557 YP_001897574.1 CDS Bphyt_3963 NC_010681.1 4439758 4441491 D catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 4439758..4441491 Burkholderia phytofirmans PsJN 6284558 YP_001897575.1 CDS Bphyt_3964 NC_010681.1 4441750 4442088 R KEGG: bxe:Bxe_A4478 hypothetical protein; hypothetical protein complement(4441750..4442088) Burkholderia phytofirmans PsJN 6281369 YP_001897576.1 CDS Bphyt_3965 NC_010681.1 4442543 4443085 R PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A4477 acetyltransferase; N-acetyltransferase GCN5 complement(4442543..4443085) Burkholderia phytofirmans PsJN 6281370 YP_001897577.1 CDS Bphyt_3966 NC_010681.1 4443369 4443548 D KEGG: bmu:Bmul_3150 hypothetical protein; hypothetical protein 4443369..4443548 Burkholderia phytofirmans PsJN 6281371 YP_001897578.1 CDS Bphyt_3967 NC_010681.1 4443642 4443851 D hypothetical protein 4443642..4443851 Burkholderia phytofirmans PsJN 6281372 YP_001897579.1 CDS Bphyt_3968 NC_010681.1 4444093 4444518 R PFAM: histidine triad (HIT) protein; KEGG: bxe:Bxe_A4476 histidine triad (HIT) protein; histidine triad (HIT) protein complement(4444093..4444518) Burkholderia phytofirmans PsJN 6281373 YP_001897580.1 CDS Bphyt_3969 NC_010681.1 4444587 4445528 R PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_A4475 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(4444587..4445528) Burkholderia phytofirmans PsJN 6281374 YP_001897581.1 CDS Bphyt_3970 NC_010681.1 4445710 4446522 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A4474 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4445710..4446522 Burkholderia phytofirmans PsJN 6281375 YP_001897582.1 CDS Bphyt_3971 NC_010681.1 4446555 4447082 R PFAM: regulatory protein AsnC/Lrp family; KEGG: bxe:Bxe_A4473 AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(4446555..4447082) Burkholderia phytofirmans PsJN 6280927 YP_001897583.1 CDS aceE NC_010681.1 4447235 4449988 D E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 4447235..4449988 Burkholderia phytofirmans PsJN 6280928 YP_001897584.1 CDS Bphyt_3973 NC_010681.1 4450119 4451207 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: bam:Bamb_3449 diguanylate cyclase; response regulator receiver modulated diguanylate cyclase complement(4450119..4451207) Burkholderia phytofirmans PsJN 6280929 YP_001897585.1 CDS Bphyt_3974 NC_010681.1 4451268 4452284 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(4451268..4452284) Burkholderia phytofirmans PsJN 6280930 YP_001897586.1 CDS Bphyt_3975 NC_010681.1 4452301 4454715 R PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: bte:BTH_II0505 chemotaxis sensor histidine kinase; CheA signal transduction histidine kinase complement(4452301..4454715) Burkholderia phytofirmans PsJN 6280931 YP_001897587.1 CDS Bphyt_3976 NC_010681.1 4454712 4455392 R PFAM: CheW domain protein; KEGG: bmn:BMA10247_A0257 chemotaxis protein CheW; CheW protein complement(4454712..4455392) Burkholderia phytofirmans PsJN 6280932 YP_001897588.1 CDS Bphyt_3977 NC_010681.1 4455385 4456815 R KEGG: bur:Bcep18194_B2306 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; CheR-type MCP methyltransferase complement(4455385..4456815) Burkholderia phytofirmans PsJN 6282178 YP_001897589.1 CDS Bphyt_3978 NC_010681.1 4456812 4457282 R PFAM: CheW domain protein; KEGG: bte:BTH_II0502 CheW domain protein; CheW protein complement(4456812..4457282) Burkholderia phytofirmans PsJN 6282179 YP_001897590.1 CDS Bphyt_3979 NC_010681.1 4457340 4458965 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bmn:BMA10247_A0254 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(4457340..4458965) Burkholderia phytofirmans PsJN 6282180 YP_001897591.1 CDS Bphyt_3981 NC_010681.1 4460266 4460589 D KEGG: bxe:Bxe_A4471 hypothetical protein; hypothetical protein 4460266..4460589 Burkholderia phytofirmans PsJN 6282182 YP_001897592.1 CDS Bphyt_3982 NC_010681.1 4460677 4460838 R hypothetical protein complement(4460677..4460838) Burkholderia phytofirmans PsJN 6282183 YP_001897593.1 CDS Bphyt_3983 NC_010681.1 4461074 4462288 R PFAM: integrase family protein; KEGG: bxe:Bxe_A4470 phage integrase; integrase family protein complement(4461074..4462288) Burkholderia phytofirmans PsJN 6282184 YP_001897594.1 CDS trmE NC_010681.1 4462463 4463857 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(4462463..4463857) Burkholderia phytofirmans PsJN 6281383 YP_001897595.1 CDS Bphyt_3985 NC_010681.1 4464228 4464635 D KEGG: bxe:Bxe_A4467 hypothetical protein; hypothetical protein 4464228..4464635 Burkholderia phytofirmans PsJN 6281384 YP_001897596.1 CDS Bphyt_3986 NC_010681.1 4464774 4466432 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(4464774..4466432) Burkholderia phytofirmans PsJN 6281385 YP_001897597.1 CDS Bphyt_3987 NC_010681.1 4466463 4466693 R PFAM: protein of unknown function DUF37; KEGG: bxe:Bxe_A4465 hypothetical protein; hypothetical protein complement(4466463..4466693) Burkholderia phytofirmans PsJN 6281386 YP_001897598.1 CDS Bphyt_3988 NC_010681.1 4466800 4467285 R TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: bxe:Bxe_A4464 ribonuclease P; ribonuclease P complement(4466800..4467285) Burkholderia phytofirmans PsJN 6281387 YP_001897599.1 CDS rpmH NC_010681.1 4467309 4467443 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(4467309..4467443) Burkholderia phytofirmans PsJN 6281388 Bphyt_R0067 tRNA Bphyt_R0067 NC_010676.1 906000 906076 D tRNA-Ile 906000..906076 Burkholderia phytofirmans PsJN 6278502 Bphyt_R0068 tRNA Bphyt_R0068 NC_010676.1 906145 906220 D tRNA-Ala 906145..906220 Burkholderia phytofirmans PsJN 6277578 Bphyt_R0072 tRNA Bphyt_R0072 NC_010676.1 1150546 1150622 D tRNA-Ile 1150546..1150622 Burkholderia phytofirmans PsJN 6280029 Bphyt_R0073 tRNA Bphyt_R0073 NC_010676.1 1150691 1150766 D tRNA-Ala 1150691..1150766 Burkholderia phytofirmans PsJN 6280373 Bphyt_R0076 tRNA Bphyt_R0076 NC_010676.1 2859820 2859896 R tRNA-Val complement(2859820..2859896) Burkholderia phytofirmans PsJN 6280015 Bphyt_R0079 tRNA Bphyt_R0079 NC_010676.1 2879427 2879502 R tRNA-Ala complement(2879427..2879502) Burkholderia phytofirmans PsJN 6279530 Bphyt_R0080 tRNA Bphyt_R0080 NC_010676.1 2879571 2879647 R tRNA-Ile complement(2879571..2879647) Burkholderia phytofirmans PsJN 6279692 Bphyt_R0082 tRNA Bphyt_R0082 NC_010676.1 3107663 3107750 R tRNA-Met complement(3107663..3107750) Burkholderia phytofirmans PsJN 6277964 Bphyt_R0001 tRNA Bphyt_R0001 NC_010681.1 318058 318147 R tRNA-Arg complement(318058..318147) Burkholderia phytofirmans PsJN 6281562 Bphyt_R0002 tRNA Bphyt_R0002 NC_010681.1 321762 321837 R tRNA-Lys complement(321762..321837) Burkholderia phytofirmans PsJN 6282450 Bphyt_R0003 tRNA Bphyt_R0003 NC_010681.1 341985 342060 D tRNA-Phe 341985..342060 Burkholderia phytofirmans PsJN 6283266 Bphyt_R0004 tRNA Bphyt_R0004 NC_010681.1 444175 444250 D tRNA-Ala 444175..444250 Burkholderia phytofirmans PsJN 6284222 Bphyt_R0005 tRNA Bphyt_R0005 NC_010681.1 636668 636744 R tRNA-Gln complement(636668..636744) Burkholderia phytofirmans PsJN 6283055 Bphyt_R0006 tRNA Bphyt_R0006 NC_010681.1 838129 838204 R tRNA-Lys complement(838129..838204) Burkholderia phytofirmans PsJN 6284469 Bphyt_R0008 tRNA Bphyt_R0008 NC_010681.1 1179844 1179934 D tRNA-Ser 1179844..1179934 Burkholderia phytofirmans PsJN 6282792 Bphyt_R0009 tRNA Bphyt_R0009 NC_010681.1 1293380 1293454 R tRNA-Arg complement(1293380..1293454) Burkholderia phytofirmans PsJN 6283477 Bphyt_R0010 tRNA Bphyt_R0010 NC_010681.1 1502952 1503036 D tRNA-Leu 1502952..1503036 Burkholderia phytofirmans PsJN 6284671 Bphyt_R0012 tRNA Bphyt_R0012 NC_010681.1 1543181 1543257 D tRNA-Ile 1543181..1543257 Burkholderia phytofirmans PsJN 6283745 Bphyt_R0013 tRNA Bphyt_R0013 NC_010681.1 1543326 1543401 D tRNA-Ala 1543326..1543401 Burkholderia phytofirmans PsJN 6283746 Bphyt_R0016 tRNA Bphyt_R0016 NC_010681.1 1586842 1586932 D tRNA-Ser 1586842..1586932 Burkholderia phytofirmans PsJN 6283019 Bphyt_R0017 tRNA Bphyt_R0017 NC_010681.1 1932187 1932273 R tRNA-Leu complement(1932187..1932273) Burkholderia phytofirmans PsJN 6284331 Bphyt_R0018 tRNA Bphyt_R0018 NC_010681.1 1932515 1932601 R tRNA-Leu complement(1932515..1932601) Burkholderia phytofirmans PsJN 6284332 Bphyt_R0019 tRNA Bphyt_R0019 NC_010681.1 1961718 1961794 R tRNA-Met complement(1961718..1961794) Burkholderia phytofirmans PsJN 6281473 Bphyt_R0020 tRNA Bphyt_R0020 NC_010681.1 1975450 1975525 R tRNA-His complement(1975450..1975525) Burkholderia phytofirmans PsJN 6280915 Bphyt_R0021 tRNA Bphyt_R0021 NC_010681.1 2117483 2117569 D tRNA-Leu 2117483..2117569 Burkholderia phytofirmans PsJN 6284304 Bphyt_R0022 tRNA Bphyt_R0022 NC_010681.1 2147427 2147502 D tRNA-Val 2147427..2147502 Burkholderia phytofirmans PsJN 6284622 Bphyt_R0023 tRNA Bphyt_R0023 NC_010681.1 2147546 2147622 D tRNA-Asp 2147546..2147622 Burkholderia phytofirmans PsJN 6284623 Bphyt_R0024 tRNA Bphyt_R0024 NC_010681.1 2814906 2814982 R tRNA-Asp complement(2814906..2814982) Burkholderia phytofirmans PsJN 6284415 Bphyt_R0025 tRNA Bphyt_R0025 NC_010681.1 2815077 2815152 R tRNA-Glu complement(2815077..2815152) Burkholderia phytofirmans PsJN 6284416 Bphyt_R0026 tRNA Bphyt_R0026 NC_010681.1 2815214 2815290 R tRNA-Asp complement(2815214..2815290) Burkholderia phytofirmans PsJN 6283877 Bphyt_R0027 tRNA Bphyt_R0027 NC_010681.1 2815388 2815463 R tRNA-Glu complement(2815388..2815463) Burkholderia phytofirmans PsJN 6283878 Bphyt_R0028 tRNA Bphyt_R0028 NC_010681.1 2815619 2815694 R tRNA-Ala complement(2815619..2815694) Burkholderia phytofirmans PsJN 6283879 Bphyt_R0029 tRNA Bphyt_R0029 NC_010681.1 2828550 2828643 R tRNA-Ser complement(2828550..2828643) Burkholderia phytofirmans PsJN 6283864 Bphyt_R0030 tRNA Bphyt_R0030 NC_010681.1 2948681 2948757 R tRNA-Met complement(2948681..2948757) Burkholderia phytofirmans PsJN 6281645 Bphyt_R0031 tRNA Bphyt_R0031 NC_010681.1 2994291 2994375 R tRNA-Leu complement(2994291..2994375) Burkholderia phytofirmans PsJN 6281947 Bphyt_R0032 tRNA Bphyt_R0032 NC_010681.1 3103163 3103239 R tRNA-Pro complement(3103163..3103239) Burkholderia phytofirmans PsJN 6284143 Bphyt_R0033 tRNA Bphyt_R0033 NC_010681.1 3111580 3111656 R tRNA-Val complement(3111580..3111656) Burkholderia phytofirmans PsJN 6283948 Bphyt_R0034 tRNA Bphyt_R0034 NC_010681.1 3208962 3209038 R tRNA-Arg complement(3208962..3209038) Burkholderia phytofirmans PsJN 6281153 Bphyt_R0035 tRNA Bphyt_R0035 NC_010681.1 3217785 3217861 D tRNA-Pro 3217785..3217861 Burkholderia phytofirmans PsJN 6284675 Bphyt_R0036 tRNA Bphyt_R0036 NC_010681.1 3251102 3251176 D tRNA-Val 3251102..3251176 Burkholderia phytofirmans PsJN 6281904 Bphyt_R0037 tRNA Bphyt_R0037 NC_010681.1 3267188 3267261 R tRNA-Cys complement(3267188..3267261) Burkholderia phytofirmans PsJN 6283094 Bphyt_R0038 tRNA Bphyt_R0038 NC_010681.1 3267367 3267442 R tRNA-Gly complement(3267367..3267442) Burkholderia phytofirmans PsJN 6283095 Bphyt_R0039 tRNA Bphyt_R0039 NC_010681.1 3267505 3267580 R tRNA-Gly complement(3267505..3267580) Burkholderia phytofirmans PsJN 6283647 Bphyt_R0040 tRNA Bphyt_R0040 NC_010681.1 3315547 3315622 D tRNA-Asn 3315547..3315622 Burkholderia phytofirmans PsJN 6284421 Bphyt_R0041 tRNA Bphyt_R0041 NC_010681.1 3315700 3315775 D tRNA-Asn 3315700..3315775 Burkholderia phytofirmans PsJN 6284422 Bphyt_R0042 tRNA Bphyt_R0042 NC_010681.1 3464430 3464505 D tRNA-Thr 3464430..3464505 Burkholderia phytofirmans PsJN 6280739 Bphyt_R0043 tRNA Bphyt_R0043 NC_010681.1 3475597 3475673 D tRNA-Arg 3475597..3475673 Burkholderia phytofirmans PsJN 6283825 Bphyt_R0044 tRNA Bphyt_R0044 NC_010681.1 3475753 3475829 D tRNA-Arg 3475753..3475829 Burkholderia phytofirmans PsJN 6281313 Bphyt_R0045 tRNA Bphyt_R0045 NC_010681.1 3483828 3483917 D tRNA-Ser 3483828..3483917 Burkholderia phytofirmans PsJN 6282871 Bphyt_R0046 tRNA Bphyt_R0046 NC_010681.1 3510354 3510427 D tRNA-Gly 3510354..3510427 Burkholderia phytofirmans PsJN 6282486 Bphyt_R0047 tRNA Bphyt_R0047 NC_010681.1 3515619 3515703 D tRNA-Leu 3515619..3515703 Burkholderia phytofirmans PsJN 6281159 Bphyt_R0048 tRNA Bphyt_R0048 NC_010681.1 3717423 3717499 D tRNA-Met 3717423..3717499 Burkholderia phytofirmans PsJN 6282146 Bphyt_R0049 tRNA Bphyt_R0049 NC_010681.1 3882622 3882698 D tRNA-Pro 3882622..3882698 Burkholderia phytofirmans PsJN 6281920 Bphyt_R0052 tRNA Bphyt_R0052 NC_010681.1 3927451 3927526 R tRNA-Ala complement(3927451..3927526) Burkholderia phytofirmans PsJN 6284147 Bphyt_R0053 tRNA Bphyt_R0053 NC_010681.1 3927595 3927671 R tRNA-Ile complement(3927595..3927671) Burkholderia phytofirmans PsJN 6284148 Bphyt_R0055 tRNA Bphyt_R0055 NC_010681.1 3985340 3985415 R tRNA-Thr complement(3985340..3985415) Burkholderia phytofirmans PsJN 6282924 Bphyt_R0056 tRNA Bphyt_R0056 NC_010681.1 4094524 4094599 R tRNA-Trp complement(4094524..4094599) Burkholderia phytofirmans PsJN 6282355 Bphyt_R0057 tRNA Bphyt_R0057 NC_010681.1 4095918 4095992 R tRNA-Thr complement(4095918..4095992) Burkholderia phytofirmans PsJN 6282357 Bphyt_R0058 tRNA Bphyt_R0058 NC_010681.1 4096009 4096082 R tRNA-Gly complement(4096009..4096082) Burkholderia phytofirmans PsJN 6282358 Bphyt_R0059 tRNA Bphyt_R0059 NC_010681.1 4096124 4096209 R tRNA-Tyr complement(4096124..4096209) Burkholderia phytofirmans PsJN 6282651 Bphyt_R0062 tRNA Bphyt_R0062 NC_010681.1 4099886 4099961 R tRNA-Ala complement(4099886..4099961) Burkholderia phytofirmans PsJN 6281435 Bphyt_R0063 tRNA Bphyt_R0063 NC_010681.1 4100030 4100106 R tRNA-Ile complement(4100030..4100106) Burkholderia phytofirmans PsJN 6281436 Bphyt_R0065 tRNA Bphyt_R0065 NC_010681.1 4332401 4332476 R tRNA-Arg complement(4332401..4332476) Burkholderia phytofirmans PsJN 6283140 Bphyt_R0066 rRNA Bphyt_R0066 NC_010676.1 904395 905920 D 16S ribosomal RNA 904395..905920 Burkholderia phytofirmans PsJN 6279358 Bphyt_R0069 rRNA Bphyt_R0069 NC_010676.1 906542 909421 D 23S ribosomal RNA 906542..909421 Burkholderia phytofirmans PsJN 6279843 Bphyt_R0070 rRNA Bphyt_R0070 NC_010676.1 909628 909740 D 5S ribosomal RNA 909628..909740 Burkholderia phytofirmans PsJN 6279857 Bphyt_R0071 rRNA Bphyt_R0071 NC_010676.1 1148943 1150466 D 16S ribosomal RNA 1148943..1150466 Burkholderia phytofirmans PsJN 6280357 Bphyt_R0074 rRNA Bphyt_R0074 NC_010676.1 1151088 1153967 D 23S ribosomal RNA 1151088..1153967 Burkholderia phytofirmans PsJN 6278711 Bphyt_R0075 rRNA Bphyt_R0075 NC_010676.1 1154175 1154287 D 5S ribosomal RNA 1154175..1154287 Burkholderia phytofirmans PsJN 6278978 Bphyt_R0077 rRNA Bphyt_R0077 NC_010676.1 2875908 2876020 R 5S ribosomal RNA complement(2875908..2876020) Burkholderia phytofirmans PsJN 6278873 Bphyt_R0078 rRNA Bphyt_R0078 NC_010676.1 2876226 2879105 R 23S ribosomal RNA complement(2876226..2879105) Burkholderia phytofirmans PsJN 6278058 Bphyt_R0081 rRNA Bphyt_R0081 NC_010676.1 2879727 2881250 R 16S ribosomal RNA complement(2879727..2881250) Burkholderia phytofirmans PsJN 6278546 Bphyt_R0011 rRNA Bphyt_R0011 NC_010681.1 1541578 1543101 D 16S ribosomal RNA 1541578..1543101 Burkholderia phytofirmans PsJN 6283744 Bphyt_R0014 rRNA Bphyt_R0014 NC_010681.1 1543723 1546602 D 23S ribosomal RNA 1543723..1546602 Burkholderia phytofirmans PsJN 6281583 Bphyt_R0015 rRNA Bphyt_R0015 NC_010681.1 1546810 1546922 D 5S ribosomal RNA 1546810..1546922 Burkholderia phytofirmans PsJN 6281584 Bphyt_R0050 rRNA Bphyt_R0050 NC_010681.1 3923930 3924042 R 5S ribosomal RNA complement(3923930..3924042) Burkholderia phytofirmans PsJN 6281250 Bphyt_R0051 rRNA Bphyt_R0051 NC_010681.1 3924250 3927129 R 23S ribosomal RNA complement(3924250..3927129) Burkholderia phytofirmans PsJN 6281251 Bphyt_R0054 rRNA Bphyt_R0054 NC_010681.1 3927751 3929274 R 16S ribosomal RNA complement(3927751..3929274) Burkholderia phytofirmans PsJN 6284149 Bphyt_R0060 rRNA Bphyt_R0060 NC_010681.1 4096365 4096477 R 5S ribosomal RNA complement(4096365..4096477) Burkholderia phytofirmans PsJN 6282652 Bphyt_R0061 rRNA Bphyt_R0061 NC_010681.1 4096685 4099564 R 23S ribosomal RNA complement(4096685..4099564) Burkholderia phytofirmans PsJN 6282653 Bphyt_R0064 rRNA Bphyt_R0064 NC_010681.1 4100186 4101709 R 16S ribosomal RNA complement(4100186..4101709) Burkholderia phytofirmans PsJN 6281437