-- dump date 20140619_013036 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 216591000001 SEQ_END SEQ_END NC_011000.1 3870082 3870082 DR NC_011000.1; contig end 3870082..3870082 Burkholderia cenocepacia J2315 216591000002 SEQ_END SEQ_END NC_011001.1 3217062 3217062 DR NC_011001.1; contig end 3217062..3217062 Burkholderia cenocepacia J2315 216591000003 SEQ_END SEQ_END NC_011002.1 875977 875977 DR NC_011002.1; contig end 875977..875977 Burkholderia cenocepacia J2315 216591000004 SEQ_END SEQ_END NC_011003.1 92661 92661 DR NC_011003.1; contig end 92661..92661 Burkholderia cenocepacia J2315 YP_001989035.1 CDS BCAL0001 NC_011000.1 431 1645 D sodium/hydrogen exchanger family protein 431..1645 Burkholderia cenocepacia J2315 6930672 YP_002229165.1 CDS BCAL0002 NC_011000.1 1660 2775 D ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase 1660..2775 Burkholderia cenocepacia J2315 6930673 YP_002229166.1 CDS BCAL0003 NC_011000.1 3283 3921 D MarR family regulatory protein 3283..3921 Burkholderia cenocepacia J2315 6930674 YP_002229167.1 CDS BCAL0004 NC_011000.1 3950 4660 D Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 3950..4660 Burkholderia cenocepacia J2315 6930675 YP_002229168.1 CDS BCAL0005 NC_011000.1 4871 5983 D putative NADH-dependent flavin oxidoreductase 4871..5983 Burkholderia cenocepacia J2315 6930676 YP_002229169.1 CDS BCAL0006 NC_011000.1 6161 6691 D putative protein lysine methyltransferase protein 6161..6691 Burkholderia cenocepacia J2315 6930677 YP_002229170.1 CDS BCAL0007 NC_011000.1 6845 8329 R two-component regulatory system, sensor kinase protein complement(6845..8329) Burkholderia cenocepacia J2315 6930678 YP_002229171.1 CDS BCAL0008 NC_011000.1 8450 9142 R two-component regulatory system, response regulator protein complement(8450..9142) Burkholderia cenocepacia J2315 6930679 YP_002229172.1 CDS BCAL0008A NC_011000.1 9265 9495 D hypothetical protein 9265..9495 Burkholderia cenocepacia J2315 6930680 YP_002229173.1 CDS phhB NC_011000.1 9588 9896 R 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase complement(9588..9896) Burkholderia cenocepacia J2315 6930681 YP_002229174.1 CDS phhA NC_011000.1 10057 10950 R phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase complement(10057..10950) Burkholderia cenocepacia J2315 6930682 YP_002229175.1 CDS BCAL0011 NC_011000.1 11090 11575 D AnsC family regulatory protein 11090..11575 Burkholderia cenocepacia J2315 6933960 YP_002229176.1 CDS BCAL0012 NC_011000.1 11647 12180 R putative adenylate cyclase complement(11647..12180) Burkholderia cenocepacia J2315 6930683 YP_002229177.1 CDS BCAL0013 NC_011000.1 12385 13284 R LysR family regulatory protein complement(12385..13284) Burkholderia cenocepacia J2315 6930684 YP_002229178.1 CDS BCAL0014 NC_011000.1 13473 15158 D putative GMC oxidoreductase 13473..15158 Burkholderia cenocepacia J2315 6930685 YP_002229179.1 CDS BCAL0015 NC_011000.1 15597 16376 D putative branched-chain amino acid ABC transporter ATP-binding protein 15597..16376 Burkholderia cenocepacia J2315 6930686 YP_002229180.1 CDS BCAL0016 NC_011000.1 16373 17128 D putative branched-chain amino acid ABC transporter ATP-binding protein 16373..17128 Burkholderia cenocepacia J2315 6930687 YP_002229181.1 CDS BCAL0017 NC_011000.1 17206 18405 D putative branched-chain amino acid ABC transporter periplasmic protein 17206..18405 Burkholderia cenocepacia J2315 6930688 YP_002229182.1 CDS BCAL0018 NC_011000.1 18538 19422 D putative branched-chain amino acid ABC transporter permease 18538..19422 Burkholderia cenocepacia J2315 6930689 YP_002229183.1 CDS BCAL0019 NC_011000.1 19422 20399 D putative branched-chain amino acid ABC transporter permease 19422..20399 Burkholderia cenocepacia J2315 6930690 YP_002229184.1 CDS BCAL0020 NC_011000.1 21481 22638 D putative branched-chain amino acid ABC transporter periplasmic substrate binding protein 21481..22638 Burkholderia cenocepacia J2315 6930691 YP_002229185.1 CDS BCAL0021 NC_011000.1 22845 23900 D putative branched-chain amino acid ABC transporter permease 22845..23900 Burkholderia cenocepacia J2315 6930692 YP_002229186.1 CDS BCAL0022 NC_011000.1 23905 25689 D putative branched-chain amino acid ABC transporter ATP-binding membrane protein 23905..25689 Burkholderia cenocepacia J2315 6930693 YP_002229187.1 CDS BCAL0023 NC_011000.1 25704 26444 D putative branched-chain amino acid ABC transporter ATP-binding protein 25704..26444 Burkholderia cenocepacia J2315 6930694 YP_002229188.1 CDS gidA NC_011000.1 26985 28955 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 26985..28955 Burkholderia cenocepacia J2315 6930695 YP_002229189.1 CDS gidB NC_011000.1 28952 29638 D glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 28952..29638 Burkholderia cenocepacia J2315 6933627 YP_002229190.1 CDS BCAL0026 NC_011000.1 29690 30469 D chromosome partitioning protein ParA 29690..30469 Burkholderia cenocepacia J2315 6933628 YP_002229191.1 CDS BCAL0027 NC_011000.1 30501 31394 D chromosome partitioning protein ParB 30501..31394 Burkholderia cenocepacia J2315 6930696 YP_002229192.1 CDS BCAL0028 NC_011000.1 31405 32535 D putative citrate transporter protein 31405..32535 Burkholderia cenocepacia J2315 6930697 YP_002229193.1 CDS BCAL0029 NC_011000.1 33104 33628 D putative ATP synthase protein I AtpI 33104..33628 Burkholderia cenocepacia J2315 6930698 YP_002229194.1 CDS atpB NC_011000.1 33738 34589 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 33738..34589 Burkholderia cenocepacia J2315 6930699 YP_002229195.1 CDS atpE NC_011000.1 34665 34934 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 34665..34934 Burkholderia cenocepacia J2315 6933324 YP_002229196.1 CDS atpF NC_011000.1 35064 35534 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 35064..35534 Burkholderia cenocepacia J2315 6933327 YP_002229197.1 CDS atpH NC_011000.1 35537 36076 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 35537..36076 Burkholderia cenocepacia J2315 6933328 YP_002229198.1 CDS atpA NC_011000.1 36121 37662 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 36121..37662 Burkholderia cenocepacia J2315 6933330 YP_002229199.1 CDS atpG NC_011000.1 37731 38606 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 37731..38606 Burkholderia cenocepacia J2315 6933323 YP_002229200.1 CDS atpD NC_011000.1 38673 40067 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 38673..40067 Burkholderia cenocepacia J2315 6933329 YP_002229201.1 CDS atpC NC_011000.1 40189 40614 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 40189..40614 Burkholderia cenocepacia J2315 6933326 YP_002229202.1 CDS BCAL0038 NC_011000.1 40897 42624 D AMP-binding domain-containing 40897..42624 Burkholderia cenocepacia J2315 6933325 YP_002229203.1 CDS pheC NC_011000.1 43359 44171 R periplasmic cyclohexadienyl dehydratase complement(43359..44171) Burkholderia cenocepacia J2315 6930700 YP_002229204.1 CDS hemE NC_011000.1 44321 45415 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 44321..45415 Burkholderia cenocepacia J2315 6933957 YP_002229205.1 CDS priA NC_011000.1 45867 48128 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 45867..48128 Burkholderia cenocepacia J2315 6933699 YP_002229206.1 CDS putA NC_011000.1 48506 52438 D proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 48506..52438 Burkholderia cenocepacia J2315 6933986 YP_002229207.1 CDS BCAL0043 NC_011000.1 52523 53662 D putative extracellular ligand-binding protein 52523..53662 Burkholderia cenocepacia J2315 6934009 YP_002229208.1 CDS BCAL0044 NC_011000.1 53796 54320 D putative transposase 53796..54320 Burkholderia cenocepacia J2315 6930701 YP_002229209.1 CDS BCAL0045 NC_011000.1 54320 55156 D putative transposase 54320..55156 Burkholderia cenocepacia J2315 6930702 YP_002229210.1 CDS BCAL0046 NC_011000.1 55228 56736 R putative fatty-acid CoA ligase complement(55228..56736) Burkholderia cenocepacia J2315 6930703 YP_002229211.1 CDS BCAL0047 NC_011000.1 56788 58440 R putative acyl-CoA dehydrogenase complement(56788..58440) Burkholderia cenocepacia J2315 6930704 YP_002229212.1 CDS BCAL0048A NC_011000.1 58561 59229 D TetR family regulatory protein 58561..59229 Burkholderia cenocepacia J2315 6930705 YP_002229213.1 CDS BCAL0049 NC_011000.1 59441 60595 D catalyzes the transfer of an amino moiety; putative aminotransferase 59441..60595 Burkholderia cenocepacia J2315 6930706 YP_002229214.1 CDS BCAL0050 NC_011000.1 60764 61783 D putative transposase 60764..61783 Burkholderia cenocepacia J2315 6930707 YP_002229215.1 CDS BCAL0051 NC_011000.1 62070 62858 D periplasmic solute-binding protein 62070..62858 Burkholderia cenocepacia J2315 6930708 YP_002229216.1 CDS BCAL0052 NC_011000.1 62874 64304 D putative oxidoreductase 62874..64304 Burkholderia cenocepacia J2315 6930709 YP_002229217.1 CDS BCAL0053 NC_011000.1 64350 64922 R PadR family regulatory protein complement(64350..64922) Burkholderia cenocepacia J2315 6930710 YP_002229218.1 CDS BCAL0054 NC_011000.1 64991 65422 R MerR family regulatory protein complement(64991..65422) Burkholderia cenocepacia J2315 6930711 YP_002229219.1 CDS BCAL0055 NC_011000.1 65504 68044 D putative heavy metal resistance membrane ATPase 65504..68044 Burkholderia cenocepacia J2315 6930712 YP_002229220.1 CDS BCAL0056 NC_011000.1 68591 69472 R AraC family regulatory protein complement(68591..69472) Burkholderia cenocepacia J2315 6930713 YP_002229221.1 CDS BCAL0057 NC_011000.1 69748 71211 D hypothetical protein 69748..71211 Burkholderia cenocepacia J2315 6930714 YP_002229222.1 CDS BCAL0058 NC_011000.1 71401 72813 D putative ethanolamine permease 71401..72813 Burkholderia cenocepacia J2315 6930715 YP_002229223.1 CDS eutB NC_011000.1 72953 74350 D ethanolamine ammonia-lyase heavy chain 72953..74350 Burkholderia cenocepacia J2315 6930716 YP_002229224.1 CDS eutC NC_011000.1 74347 75144 D catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 74347..75144 Burkholderia cenocepacia J2315 6933540 YP_002229225.1 CDS BCAL0061 NC_011000.1 75137 76021 R LysR family regulatory protein complement(75137..76021) Burkholderia cenocepacia J2315 6933541 YP_002229226.1 CDS BCAL0062 NC_011000.1 76174 77799 D major facilitator superfamily protein 76174..77799 Burkholderia cenocepacia J2315 6930717 YP_002229227.1 CDS BCAL0063 NC_011000.1 77942 78475 R putative FMN flavoprotein complement(77942..78475) Burkholderia cenocepacia J2315 6930718 YP_002229228.1 CDS acoD NC_011000.1 78692 80218 D acetaldehyde dehydrogenase 78692..80218 Burkholderia cenocepacia J2315 6930719 YP_002229229.1 CDS BCAL0065 NC_011000.1 80395 80943 D hypothetical protein 80395..80943 Burkholderia cenocepacia J2315 6933279 YP_002229230.1 CDS BCAL0066 NC_011000.1 81149 82165 D AraC family regulatory protein 81149..82165 Burkholderia cenocepacia J2315 6930720 YP_002229231.1 CDS BCAL0067 NC_011000.1 82260 83342 R hypothetical protein complement(82260..83342) Burkholderia cenocepacia J2315 6930721 YP_002229232.1 CDS ilvG NC_011000.1 83354 85057 R thiamine pyrophosphate protein complement(83354..85057) Burkholderia cenocepacia J2315 6930722 YP_002229233.1 CDS BCAL0069 NC_011000.1 85336 85797 D hypothetical protein 85336..85797 Burkholderia cenocepacia J2315 6933754 YP_002229234.1 CDS BCAL0070 NC_011000.1 85794 86078 D plasmid stabilisation system protein 85794..86078 Burkholderia cenocepacia J2315 6930723 YP_002229235.1 CDS sdaA NC_011000.1 86236 87624 R L-serine dehydratase I complement(86236..87624) Burkholderia cenocepacia J2315 6930724 YP_002229236.1 CDS BCAL0072 NC_011000.1 87655 88797 R hypothetical protein complement(87655..88797) Burkholderia cenocepacia J2315 6934136 YP_002229237.1 CDS gcvP NC_011000.1 88949 91876 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(88949..91876) Burkholderia cenocepacia J2315 6930725 YP_002229238.1 CDS gcvH NC_011000.1 91935 92315 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(91935..92315) Burkholderia cenocepacia J2315 6933625 YP_002229239.1 CDS gcvT NC_011000.1 92442 93560 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(92442..93560) Burkholderia cenocepacia J2315 6933624 YP_002229240.1 CDS BCAL0076 NC_011000.1 94028 94390 R putative lipoprotein complement(94028..94390) Burkholderia cenocepacia J2315 6933266 YP_002229241.1 CDS BCAL0077 NC_011000.1 94594 95646 R putative oxidoreductase complement(94594..95646) Burkholderia cenocepacia J2315 6930726 YP_002229242.1 CDS BCAL0078 NC_011000.1 95948 96655 R hypothetical protein complement(95948..96655) Burkholderia cenocepacia J2315 6930727 YP_002229243.1 CDS rep NC_011000.1 96966 99053 D ATP-dependent DNA helicase Rep 96966..99053 Burkholderia cenocepacia J2315 6930728 YP_002229244.1 CDS BCAL0080 NC_011000.1 99160 100047 R putative cytochrome complement(99160..100047) Burkholderia cenocepacia J2315 6934033 YP_002229245.1 CDS BCAL0081 NC_011000.1 100429 101505 R prophage integrase complement(100429..101505) Burkholderia cenocepacia J2315 6933332 YP_002229246.1 CDS BCAL0082 NC_011000.1 101373 101693 R CDS is possibly extended at the C-terminus, lacking an appropriate translational stop; hypothetical protein complement(101373..101693) Burkholderia cenocepacia J2315 6930730 YP_002229247.1 CDS BCAL0083 NC_011000.1 102200 104992 R hypothetical protein complement(102200..104992) Burkholderia cenocepacia J2315 6930731 YP_002229248.1 CDS BCAL0083a NC_011000.1 104998 105255 R hypothetical protein complement(104998..105255) Burkholderia cenocepacia J2315 6930732 YP_002229249.1 CDS BCAL0084 NC_011000.1 105383 105631 R putative phage transcriptional activator protein complement(105383..105631) Burkholderia cenocepacia J2315 6930733 YP_002229250.1 CDS BCAL0084a NC_011000.1 105619 105798 R hypothetical protein complement(105619..105798) Burkholderia cenocepacia J2315 6930734 YP_002229251.1 CDS BCAL0085 NC_011000.1 105813 106028 R hypothetical protein complement(105813..106028) Burkholderia cenocepacia J2315 6930735 YP_002229252.1 CDS BCAL0086 NC_011000.1 106119 106610 D hypothetical protein 106119..106610 Burkholderia cenocepacia J2315 6930736 YP_002229253.1 CDS BCAL0087 NC_011000.1 107182 108714 D putative reverse transcriptase-group II intron 107182..108714 Burkholderia cenocepacia J2315 6930737 YP_002229254.1 CDS BCAL0088 NC_011000.1 108758 109138 D hypothetical protein 108758..109138 Burkholderia cenocepacia J2315 6933267 YP_002229255.1 CDS BCAL0089 NC_011000.1 109326 110396 R phage late control gene D protein complement(109326..110396) Burkholderia cenocepacia J2315 6930739 YP_002229256.1 CDS BCAL0090 NC_011000.1 110393 110824 R putative phage tail assembly protein complement(110393..110824) Burkholderia cenocepacia J2315 6930740 YP_002229257.1 CDS BCAL0091 NC_011000.1 110847 113417 R putative phage membrane protein complement(110847..113417) Burkholderia cenocepacia J2315 6930741 YP_002229258.1 CDS BCAL0092 NC_011000.1 113433 113546 R putative phage tail-associated protein complement(113433..113546) Burkholderia cenocepacia J2315 6930742 YP_002229259.1 CDS BCAL0093 NC_011000.1 113555 113926 R putative phage tail protein complement(113555..113926) Burkholderia cenocepacia J2315 6930743 YP_002229260.1 CDS BCAL0094 NC_011000.1 114003 114512 R phage major tail tube protein complement(114003..114512) Burkholderia cenocepacia J2315 6930744 YP_002229261.1 CDS BCAL0095 NC_011000.1 114541 115713 R putative phage major tail sheath protein complement(114541..115713) Burkholderia cenocepacia J2315 6930745 YP_002229262.1 CDS BCAL0096 NC_011000.1 115768 116502 R hypothetical protein complement(115768..116502) Burkholderia cenocepacia J2315 6930746 YP_002229263.1 CDS BCAL0097 NC_011000.1 116518 119169 R putative phage tail protein complement(116518..119169) Burkholderia cenocepacia J2315 6930747 YP_002229264.1 CDS BCAL0098 NC_011000.1 119176 119643 R putative phage tail protein complement(119176..119643) Burkholderia cenocepacia J2315 6930748 YP_002229265.1 CDS BCAL0099 NC_011000.1 119711 120625 R putative phage baseplate assembly protein J complement(119711..120625) Burkholderia cenocepacia J2315 6930749 YP_002229266.1 CDS BCAL0100 NC_011000.1 120622 120984 R putative phage baseplate assembly protein W complement(120622..120984) Burkholderia cenocepacia J2315 6930750 YP_002229267.1 CDS BCAL0101 NC_011000.1 120981 121790 R phage baseplate assembly protein complement(120981..121790) Burkholderia cenocepacia J2315 6930751 YP_002229268.1 CDS BCAL0102 NC_011000.1 122176 122625 R putative phage tail completion protein R complement(122176..122625) Burkholderia cenocepacia J2315 6930752 YP_002229269.1 CDS BCAL0103 NC_011000.1 122742 123182 R putative phage-encoded lipoprotein complement(122742..123182) Burkholderia cenocepacia J2315 6930753 YP_002229270.1 CDS BCAL0104 NC_011000.1 123179 124030 R putative phage-encoded peptidoglycan binding protein complement(123179..124030) Burkholderia cenocepacia J2315 6930754 YP_002229271.1 CDS BCAL0105 NC_011000.1 124033 124299 R putative phage membrane protein complement(124033..124299) Burkholderia cenocepacia J2315 6930755 YP_002229272.1 CDS BCAL0106 NC_011000.1 124301 124645 R putative phage membrane protein complement(124301..124645) Burkholderia cenocepacia J2315 6930756 YP_002229273.1 CDS BCAL0107 NC_011000.1 124662 124868 R phage tail protein complement(124662..124868) Burkholderia cenocepacia J2315 6930757 YP_002229274.1 CDS BCAL0108 NC_011000.1 125430 127049 D hypothetical protein 125430..127049 Burkholderia cenocepacia J2315 6930758 YP_002229275.1 CDS BCAL0109 NC_011000.1 127259 129232 D C-terminus is similar to Geobacter sulfurreducens TPR domain protein gsu1547 SWALL:AAR34921 (EMBL:AE017212) (473 aa) fasta scores: E(): 3.1e-69, 47.16% id in 441 aa; putative TPR repeat protein 127259..129232 Burkholderia cenocepacia J2315 6930759 YP_002229276.1 CDS BCAL0110 NC_011000.1 129387 130529 R putative aminotransferase complement(129387..130529) Burkholderia cenocepacia J2315 6930760 YP_002229277.1 CDS BCAL0111 NC_011000.1 130559 132901 R putative TPR repeat protein complement(130559..132901) Burkholderia cenocepacia J2315 6930761 YP_002229278.1 CDS BCAL0112 NC_011000.1 133158 133457 R hypothetical protein complement(133158..133457) Burkholderia cenocepacia J2315 6930762 YP_002229279.1 CDS fliD1 NC_011000.1 133483 134991 R B-type flagellar hook-associated protein 2 complement(133483..134991) Burkholderia cenocepacia J2315 6930763 YP_002229280.1 CDS fliC NC_011000.1 135124 136278 R structural flagella protein; Vibrio contains multiple flagellin genes usually localized into two region on the chromosome, flaAC and flaCEDB in V. cholerae, flaFBA and flaCDE in V. parahemolyticus; FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus; flagellin complement(135124..136278) Burkholderia cenocepacia J2315 6933584 YP_002229281.1 CDS rpsU NC_011000.1 136809 137021 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 136809..137021 Burkholderia cenocepacia J2315 6933583 YP_002229282.1 CDS BCAL0116 NC_011000.1 137188 139311 R putative TonB-dependent siderophore receptor complement(137188..139311) Burkholderia cenocepacia J2315 6934121 YP_002229283.1 CDS BCAL0117 NC_011000.1 139541 140776 D hypothetical protein 139541..140776 Burkholderia cenocepacia J2315 6930764 YP_002229284.1 CDS tag NC_011000.1 140861 141463 R DNA-3-methyladenine glycosylase I complement(140861..141463) Burkholderia cenocepacia J2315 6930765 YP_002229285.1 CDS BCAL0119 NC_011000.1 141605 142486 D BadF/BadG/BcrA/BcrD ATPase family protein 141605..142486 Burkholderia cenocepacia J2315 6934164 YP_002229286.1 CDS BCAL0120 NC_011000.1 142626 143450 D haloacid dehalogenase-like hydrolase 142626..143450 Burkholderia cenocepacia J2315 6930766 YP_002229287.1 CDS aqpZ NC_011000.1 143590 144333 R porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z complement(143590..144333) Burkholderia cenocepacia J2315 6930767 YP_002229288.1 CDS BCAL0122 NC_011000.1 144633 144929 D histone-like nucleoid-structuring (H-NS) protein 144633..144929 Burkholderia cenocepacia J2315 6933300 YP_002229289.1 CDS BCAL0123 NC_011000.1 145033 146097 R putative glycosyltransferase complement(145033..146097) Burkholderia cenocepacia J2315 6930768 YP_002229290.1 CDS flhD NC_011000.1 146762 147082 D with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 146762..147082 Burkholderia cenocepacia J2315 6930769 YP_002229291.1 CDS flhC NC_011000.1 147175 147729 D With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 147175..147729 Burkholderia cenocepacia J2315 6933581 YP_002229292.1 CDS motA NC_011000.1 147910 148770 D With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 147910..148770 Burkholderia cenocepacia J2315 6933580 YP_002229293.1 CDS motB NC_011000.1 148784 149803 D with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 148784..149803 Burkholderia cenocepacia J2315 6933840 YP_002229294.1 CDS cheY NC_011000.1 149828 150205 D chemotaxis two-component response regulator CheY 149828..150205 Burkholderia cenocepacia J2315 6933841 YP_002229295.1 CDS cheA NC_011000.1 150239 152506 D chemotaxis two-component sensor kinase CheA 150239..152506 Burkholderia cenocepacia J2315 6933432 YP_002229296.1 CDS cheW NC_011000.1 152554 153069 D chemotaxis protein CheW 152554..153069 Burkholderia cenocepacia J2315 6933427 YP_002229297.1 CDS tar NC_011000.1 153107 155065 D methyl-accepting chemotaxis protein 153107..155065 Burkholderia cenocepacia J2315 6933431 YP_002229298.1 CDS cheR NC_011000.1 155069 156061 D chemotaxis protein methyltransferase 155069..156061 Burkholderia cenocepacia J2315 6934166 YP_002229299.1 CDS cheD NC_011000.1 156058 156816 D catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 156058..156816 Burkholderia cenocepacia J2315 6933430 YP_002229300.1 CDS cheB1 NC_011000.1 156813 157904 D regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 156813..157904 Burkholderia cenocepacia J2315 6933429 YP_002229301.1 CDS cheY NC_011000.1 157972 158367 D chemotaxis protein CheY 157972..158367 Burkholderia cenocepacia J2315 6933428 YP_002229302.1 CDS cheZ NC_011000.1 158370 159101 D cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 158370..159101 Burkholderia cenocepacia J2315 6933433 YP_002229303.1 CDS BCAL0137 NC_011000.1 159361 159864 D hypothetical protein 159361..159864 Burkholderia cenocepacia J2315 6933434 YP_002229304.1 CDS BCAL0139 NC_011000.1 161283 161780 D putative 3-demethylubiquinone-9 3-methyltransferase 161283..161780 Burkholderia cenocepacia J2315 6930771 YP_002229305.1 CDS flhB NC_011000.1 162210 163409 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 162210..163409 Burkholderia cenocepacia J2315 6930772 YP_002229306.1 CDS flhA NC_011000.1 163406 165508 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 163406..165508 Burkholderia cenocepacia J2315 6933579 YP_002229307.1 CDS flhF NC_011000.1 165505 167304 D positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 165505..167304 Burkholderia cenocepacia J2315 6933577 YP_002229308.1 CDS BCAL0143 NC_011000.1 167297 168115 D putative flagellar biosynthesis protein 167297..168115 Burkholderia cenocepacia J2315 6930773 YP_002229309.1 CDS fliA NC_011000.1 168141 168872 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 168141..168872 Burkholderia cenocepacia J2315 6930774 YP_002229310.1 CDS ahcY NC_011000.1 169124 170542 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 169124..170542 Burkholderia cenocepacia J2315 6933582 YP_002229311.1 CDS BCAL0146 NC_011000.1 170651 171004 D hypothetical protein 170651..171004 Burkholderia cenocepacia J2315 6933292 YP_002229312.1 CDS metF NC_011000.1 171035 171865 D 5,10-methylenetetrahydrofolate reductase 171035..171865 Burkholderia cenocepacia J2315 6930775 YP_002229313.1 CDS BCAL0148 NC_011000.1 171968 173446 R putative amidase complement(171968..173446) Burkholderia cenocepacia J2315 6933811 YP_002229314.1 CDS BCAL0149 NC_011000.1 173527 174219 R putative dienelactone hydrolase complement(173527..174219) Burkholderia cenocepacia J2315 6930776 YP_002229315.1 CDS BCAL0150 NC_011000.1 174444 175526 D putative oxidoreductase 174444..175526 Burkholderia cenocepacia J2315 6930777 YP_002229316.1 CDS BCAL0151 NC_011000.1 175965 177107 D extracellular ligand binding protein 175965..177107 Burkholderia cenocepacia J2315 6930778 YP_002229317.1 CDS BCAL0152 NC_011000.1 177197 178414 R major facilitator superfamily protein complement(177197..178414) Burkholderia cenocepacia J2315 6930779 YP_002229318.1 CDS BCAL0153 NC_011000.1 178647 179306 D putative FMN flavoprotein 178647..179306 Burkholderia cenocepacia J2315 6930780 YP_002229319.1 CDS BCAL0154 NC_011000.1 179663 179956 D histone-like nucleoid-structuring (H-NS) protein 179663..179956 Burkholderia cenocepacia J2315 6930781 YP_002229320.1 CDS BCAL0155 NC_011000.1 180213 181370 D putative cation efflux protein 180213..181370 Burkholderia cenocepacia J2315 6930782 YP_002229321.1 CDS BCAL0156 NC_011000.1 181422 181892 R AnsC family regulatory protein complement(181422..181892) Burkholderia cenocepacia J2315 6930783 YP_002229322.1 CDS BCAL0157 NC_011000.1 181972 182631 R hypothetical protein complement(181972..182631) Burkholderia cenocepacia J2315 6930784 YP_002229323.1 CDS BCAL0158 NC_011000.1 182628 183272 R metallo-beta-lactamase superfamily protein complement(182628..183272) Burkholderia cenocepacia J2315 6930785 YP_002229324.1 CDS BCAL0159 NC_011000.1 183928 184539 D putative RlpA-like lipoprotein 183928..184539 Burkholderia cenocepacia J2315 6930786 YP_002229325.1 CDS BCAL0160 NC_011000.1 184618 185505 R putative methylase complement(184618..185505) Burkholderia cenocepacia J2315 6930787 YP_002229326.1 CDS BCAL0161 NC_011000.1 185552 185980 D hypothetical protein 185552..185980 Burkholderia cenocepacia J2315 6930788 YP_002229327.1 CDS gmhA NC_011000.1 186107 186691 D phosphoheptose isomerase 186107..186691 Burkholderia cenocepacia J2315 6930789 YP_002229328.1 CDS BCAL0163 NC_011000.1 186688 187509 D putative phospholipid-binding lipoprotein 186688..187509 Burkholderia cenocepacia J2315 6933662 YP_002229329.1 CDS BCAL0164 NC_011000.1 187506 187868 D putative cytochrome c-551 187506..187868 Burkholderia cenocepacia J2315 6930790 YP_002229330.1 CDS BCAL0165 NC_011000.1 188900 189877 D Possible alternative translational start site after codon 54; putative plasmid replication-associated protein 188900..189877 Burkholderia cenocepacia J2315 6933333 YP_002229331.1 CDS BCAL0166 NC_011000.1 190294 191130 R putative transposase complement(190294..191130) Burkholderia cenocepacia J2315 6930792 YP_002229332.1 CDS BCAL0167 NC_011000.1 191130 191654 R putative transposase complement(191130..191654) Burkholderia cenocepacia J2315 6930793 YP_002229333.1 CDS BCAL0169 NC_011000.1 192105 192797 R hypothetical protein complement(192105..192797) Burkholderia cenocepacia J2315 6930795 YP_002229334.1 CDS BCAL0170 NC_011000.1 192918 193169 D hypothetical protein 192918..193169 Burkholderia cenocepacia J2315 6930796 YP_002229335.1 CDS BCAL0171 NC_011000.1 193147 193539 D putative plasmid conjugal transfer protein 193147..193539 Burkholderia cenocepacia J2315 6930797 YP_002229336.1 CDS BCAL0172 NC_011000.1 193882 194244 D conjugal transfer relaxosome component TraJ 193882..194244 Burkholderia cenocepacia J2315 6930798 YP_002229337.1 CDS BCAL0173 NC_011000.1 194371 195144 D conjugal transfer protein TrbJ 194371..195144 Burkholderia cenocepacia J2315 6930799 YP_002229338.1 CDS BCAL0173a NC_011000.1 195154 195345 D hypothetical protein 195154..195345 Burkholderia cenocepacia J2315 6930800 YP_002229339.1 CDS BCAL0174 NC_011000.1 195365 196792 D putative plasmid conjugal transfer protein 195365..196792 Burkholderia cenocepacia J2315 6930801 YP_002229340.1 CDS BCAL0175 NC_011000.1 196857 197147 D hypothetical protein 196857..197147 Burkholderia cenocepacia J2315 6930802 YP_002229341.1 CDS BCAL0176 NC_011000.1 197138 197497 D hypothetical protein 197138..197497 Burkholderia cenocepacia J2315 6930803 YP_002229342.1 CDS BCAL0177 NC_011000.1 197494 197796 D putative plasmid conjugal transfer protein 197494..197796 Burkholderia cenocepacia J2315 6930804 YP_002229343.1 CDS BCAL0178 NC_011000.1 198105 198917 D putative DNA methyltransferase 198105..198917 Burkholderia cenocepacia J2315 6930805 YP_002229344.1 CDS BCAL0179 NC_011000.1 198900 201533 R hypothetical protein complement(198900..201533) Burkholderia cenocepacia J2315 6930806 YP_002229345.1 CDS BCAL0180 NC_011000.1 201536 202231 R Possible alternative translational start sites; hypothetical protein complement(201536..202231) Burkholderia cenocepacia J2315 6930807 YP_002229346.1 CDS BCAL0181 NC_011000.1 202239 202880 R hypothetical protein complement(202239..202880) Burkholderia cenocepacia J2315 6930808 YP_002229347.1 CDS BCAL0182 NC_011000.1 203211 204338 R putative plasmid recombinase complement(203211..204338) Burkholderia cenocepacia J2315 6930809 YP_002229348.1 CDS gudD NC_011000.1 204567 205964 R putative glucarate dehydratase complement(204567..205964) Burkholderia cenocepacia J2315 6930810 YP_002229349.1 CDS gudP NC_011000.1 206027 207367 R putative glucarate transporter complement(206027..207367) Burkholderia cenocepacia J2315 6933691 YP_002229350.1 CDS BCAL0185 NC_011000.1 207582 208505 R LysR family regulatory protein complement(207582..208505) Burkholderia cenocepacia J2315 6933693 YP_002229351.1 CDS BCAL0186 NC_011000.1 208597 209328 D putative glutathione S-transferase 208597..209328 Burkholderia cenocepacia J2315 6930811 YP_002229352.1 CDS BCAL0187 NC_011000.1 209455 210087 D hypothetical protein 209455..210087 Burkholderia cenocepacia J2315 6930812 YP_002229353.1 CDS BCAL0188 NC_011000.1 210103 211440 D putative dioxygenase 210103..211440 Burkholderia cenocepacia J2315 6930813 YP_002229354.1 CDS BCAL0189 NC_011000.1 211454 212620 R putative ABC transporter permease complement(211454..212620) Burkholderia cenocepacia J2315 6930814 YP_002229355.1 CDS BCAL0190 NC_011000.1 212629 213783 R putative ABC transporter permease complement(212629..213783) Burkholderia cenocepacia J2315 6930815 YP_002229356.1 CDS BCAL0191 NC_011000.1 213805 214503 R ABC transporter ATP-binding protein complement(213805..214503) Burkholderia cenocepacia J2315 6930816 YP_002229357.1 CDS BCAL0192 NC_011000.1 214509 215714 R transporter system transport protein complement(214509..215714) Burkholderia cenocepacia J2315 6930817 YP_002229358.1 CDS BCAL0193 NC_011000.1 216073 216306 D hypothetical protein 216073..216306 Burkholderia cenocepacia J2315 6930818 YP_002229359.1 CDS BCAL0193a NC_011000.1 216387 217157 R hypothetical protein complement(216387..217157) Burkholderia cenocepacia J2315 6930819 YP_002229360.1 CDS BCAL0194 NC_011000.1 217254 218123 D C-terminus is similar to Escherichia coli, and Escherichia coli O6 2-hydroxy-3-oxopropionate reductase GarR or b3125 or c3880 SWALL:GARR_ECOLI (SWALL:P23523) (294 aa) fasta scores: E(): 8e-14, 27.66% id in 282 aa, and C-terminus is similar to Xanthomonas campestris dehydrogenase xcc0308 SWALL:Q8PDM7 (EMBL:AE012127) (291 aa) fasta scores: E(): 1.3e-48, 53.1% id in 290 aa; putative oxidoreductase 217254..218123 Burkholderia cenocepacia J2315 6930820 YP_002229361.1 CDS BCAL0195 NC_011000.1 218197 218832 D putative amino acid transport protein 218197..218832 Burkholderia cenocepacia J2315 6930821 YP_002229362.1 CDS BCAL0196 NC_011000.1 218924 220207 R major facilitator superfamily protein complement(218924..220207) Burkholderia cenocepacia J2315 6930822 YP_002229363.1 CDS BCAL0197 NC_011000.1 220305 221234 D LysR family regulatory protein 220305..221234 Burkholderia cenocepacia J2315 6930823 YP_002229364.1 CDS BCAL0198 NC_011000.1 221419 222255 R putative outer membrane protein complement(221419..222255) Burkholderia cenocepacia J2315 6930824 YP_002229365.1 CDS BCAL0199 NC_011000.1 222271 223512 R putative lipoprotein complement(222271..223512) Burkholderia cenocepacia J2315 6930825 YP_002229366.1 CDS BCAL0200 NC_011000.1 223661 225091 R putative lipoprotein complement(223661..225091) Burkholderia cenocepacia J2315 6930826 YP_002229367.1 CDS argC NC_011000.1 225526 226476 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase complement(225526..226476) Burkholderia cenocepacia J2315 6930827 YP_002229368.1 CDS BCAL0202 NC_011000.1 226668 227240 R putative flavoprotein complement(226668..227240) Burkholderia cenocepacia J2315 6933304 YP_002229369.1 CDS BCAL0203 NC_011000.1 227455 228051 R phosphatidylethanolamine-binding protein complement(227455..228051) Burkholderia cenocepacia J2315 6930828 YP_002229370.1 CDS pyrE NC_011000.1 228292 228978 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(228292..228978) Burkholderia cenocepacia J2315 6930829 YP_002229371.1 CDS BCAL0205 NC_011000.1 229439 231709 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 229439..231709 Burkholderia cenocepacia J2315 6934016 YP_002229372.1 CDS BCAL0206 NC_011000.1 231858 235448 R Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase complement(231858..235448) Burkholderia cenocepacia J2315 6930830 YP_002229373.1 CDS BCAL0206A NC_011000.1 235778 235972 D Similar to Burkholderia pseudomallei (strain 1710b) putative outer membrane protein UniProt:Q3JYB8 (EMBL:CP000124) (65 aa) fasta scores: E()=6.9e-06, 45.312% id in 64 aa. Possible gene remnant. Similar to the N-terminal region of Caulobacter crescentus motA/tolQ/exbB proton channel family protein SWALL:Q9A5W1 (EMBL:AE005903) (302 aa) fasta scores: E(): 6.2, 43.13% id in 51 aa; putative outer membrane protein 235778..235972 Burkholderia cenocepacia J2315 6930831 YP_002229374.1 CDS hppD NC_011000.1 236106 237203 R CDS is involved in the synthesis of melanin-like pigment which is capable of protecting the organism from in vitro and in vivo sources of oxidative stress; 4-hydroxyphenylpyruvic acid dioxygenase complement(236106..237203) Burkholderia cenocepacia J2315 6930832 YP_002229375.1 CDS BCAL0208 NC_011000.1 237418 237942 D AnsC family regulatory protein 237418..237942 Burkholderia cenocepacia J2315 6933731 YP_002229376.1 CDS BCAL0209 NC_011000.1 238009 238656 R acetyltransferase (GNAT) family protein complement(238009..238656) Burkholderia cenocepacia J2315 6930833 YP_002229377.1 CDS BCAL0210 NC_011000.1 238891 239496 R TetR family regulatory protein complement(238891..239496) Burkholderia cenocepacia J2315 6930834 YP_002229378.1 CDS BCAL0211 NC_011000.1 239510 240331 R hypothetical protein complement(239510..240331) Burkholderia cenocepacia J2315 6930835 YP_002229379.1 CDS paaE NC_011000.1 240459 241547 R putative phenylacetic acid degradation NADH oxidoreductase PaaE complement(240459..241547) Burkholderia cenocepacia J2315 6930836 YP_002229380.1 CDS paaD NC_011000.1 241550 242104 R phenylacetic acid degradation protein PaaD complement(241550..242104) Burkholderia cenocepacia J2315 6933920 YP_002229381.1 CDS paaC NC_011000.1 242130 242933 R phenylacetic acid degradation protein PaaC complement(242130..242933) Burkholderia cenocepacia J2315 6933919 YP_002229382.1 CDS paaB NC_011000.1 242944 243228 R with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB complement(242944..243228) Burkholderia cenocepacia J2315 6933918 YP_002229383.1 CDS paaA NC_011000.1 243264 244262 R with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA complement(243264..244262) Burkholderia cenocepacia J2315 6933917 YP_002229384.1 CDS BCAL0217 NC_011000.1 244457 245728 D putative exported GDSL-like lipase/acylhydrolase 244457..245728 Burkholderia cenocepacia J2315 6933916 YP_002229385.1 CDS BCAL0218 NC_011000.1 253036 253371 D hypothetical protein 253036..253371 Burkholderia cenocepacia J2315 6933335 YP_002229386.1 CDS tufA1 NC_011000.1 254043 255233 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 254043..255233 Burkholderia cenocepacia J2315 6933338 YP_002229387.1 CDS secE NC_011000.1 255411 255791 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 255411..255791 Burkholderia cenocepacia J2315 6933331 YP_002229388.1 CDS nusG NC_011000.1 255793 256350 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 255793..256350 Burkholderia cenocepacia J2315 6934140 YP_002229389.1 CDS rplK NC_011000.1 256492 256923 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 256492..256923 Burkholderia cenocepacia J2315 6933890 YP_002229390.1 CDS rplA NC_011000.1 256924 257622 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 256924..257622 Burkholderia cenocepacia J2315 6934032 YP_002229391.1 CDS rplJ NC_011000.1 257932 258429 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 257932..258429 Burkholderia cenocepacia J2315 6934059 YP_002229392.1 CDS rplL NC_011000.1 258493 258867 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 258493..258867 Burkholderia cenocepacia J2315 6934066 YP_002229393.1 CDS rpoB NC_011000.1 259249 263355 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 259249..263355 Burkholderia cenocepacia J2315 6934067 YP_002229394.1 CDS rpoC NC_011000.1 263377 267618 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 263377..267618 Burkholderia cenocepacia J2315 6930839 YP_002229395.1 CDS recQ NC_011000.1 267898 269745 D ATP-dependent DNA helicase RecQ 267898..269745 Burkholderia cenocepacia J2315 6934093 YP_002229396.1 CDS rpsL NC_011000.1 269972 270352 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 269972..270352 Burkholderia cenocepacia J2315 6934029 YP_002229397.1 CDS rpsG NC_011000.1 270525 270995 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 270525..270995 Burkholderia cenocepacia J2315 6934111 YP_002229398.1 CDS fusA NC_011000.1 271119 273221 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 271119..273221 Burkholderia cenocepacia J2315 6934106 YP_002229399.1 CDS tuf NC_011000.1 273264 274454 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 273264..274454 Burkholderia cenocepacia J2315 6933615 YP_002229400.1 CDS rpsJ NC_011000.1 274742 275053 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 274742..275053 Burkholderia cenocepacia J2315 6934208 YP_002229401.1 CDS rplC NC_011000.1 275232 275882 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 275232..275882 Burkholderia cenocepacia J2315 6934109 YP_002229402.1 CDS rplD NC_011000.1 275882 276502 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 275882..276502 Burkholderia cenocepacia J2315 6934061 YP_002229403.1 CDS rplW NC_011000.1 276499 276813 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 276499..276813 Burkholderia cenocepacia J2315 6934062 YP_002229404.1 CDS rplB NC_011000.1 276816 277643 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 276816..277643 Burkholderia cenocepacia J2315 6934079 YP_002229405.1 CDS rpsS NC_011000.1 277654 277929 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 277654..277929 Burkholderia cenocepacia J2315 6934060 YP_002229406.1 CDS rplV NC_011000.1 277942 278271 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 277942..278271 Burkholderia cenocepacia J2315 6934119 YP_002229407.1 CDS rpsC NC_011000.1 278283 279083 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 278283..279083 Burkholderia cenocepacia J2315 6934077 YP_002229408.1 CDS rplP NC_011000.1 279086 279502 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 279086..279502 Burkholderia cenocepacia J2315 6934102 YP_002229409.1 CDS rpmC NC_011000.1 279512 279706 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 279512..279706 Burkholderia cenocepacia J2315 6934071 YP_002229410.1 CDS rpsQ NC_011000.1 279703 279975 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 279703..279975 Burkholderia cenocepacia J2315 6934083 YP_002229411.1 CDS rplN NC_011000.1 280285 280653 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 280285..280653 Burkholderia cenocepacia J2315 6934116 YP_002229412.1 CDS rplX NC_011000.1 280663 280971 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 280663..280971 Burkholderia cenocepacia J2315 6934069 YP_002229413.1 CDS rplE NC_011000.1 280988 281527 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 280988..281527 Burkholderia cenocepacia J2315 6934080 YP_002229414.1 CDS rpsN NC_011000.1 281535 281840 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 281535..281840 Burkholderia cenocepacia J2315 6934063 YP_002229415.1 CDS rpsH NC_011000.1 281855 282250 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 281855..282250 Burkholderia cenocepacia J2315 6934113 YP_002229416.1 CDS rplF NC_011000.1 282269 282799 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 282269..282799 Burkholderia cenocepacia J2315 6934107 YP_002229417.1 CDS rplR NC_011000.1 282812 283177 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 282812..283177 Burkholderia cenocepacia J2315 6934064 YP_002229418.1 CDS rpsE NC_011000.1 283192 283710 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 283192..283710 Burkholderia cenocepacia J2315 6934073 YP_002229419.1 CDS rpmD NC_011000.1 283726 283908 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 283726..283908 Burkholderia cenocepacia J2315 6934104 YP_002229420.1 CDS rplO NC_011000.1 283935 284369 D late assembly protein; 50S ribosomal protein L15 283935..284369 Burkholderia cenocepacia J2315 6934084 YP_002229421.1 CDS secY NC_011000.1 284412 285761 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 284412..285761 Burkholderia cenocepacia J2315 6934070 YP_002229422.1 CDS infA NC_011000.1 285769 285987 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 285769..285987 Burkholderia cenocepacia J2315 6934143 YP_002229423.1 CDS rpmJ NC_011000.1 286008 286124 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 286008..286124 Burkholderia cenocepacia J2315 6933757 YP_002229424.1 CDS rpsM NC_011000.1 286163 286528 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 286163..286528 Burkholderia cenocepacia J2315 6934091 YP_002229425.1 CDS rpsK NC_011000.1 286557 286958 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 286557..286958 Burkholderia cenocepacia J2315 6934112 YP_002229426.1 CDS rpsD NC_011000.1 287113 287736 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 287113..287736 Burkholderia cenocepacia J2315 6934110 YP_002229427.1 CDS rpoA NC_011000.1 287861 288838 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 287861..288838 Burkholderia cenocepacia J2315 6934103 YP_002229428.1 CDS rplQ NC_011000.1 288977 289372 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 288977..289372 Burkholderia cenocepacia J2315 6934092 YP_002229429.1 CDS cutA NC_011000.1 289576 289902 D putative divalent-cation tolerance protein CutA 289576..289902 Burkholderia cenocepacia J2315 6934072 YP_002229430.1 CDS dsbD NC_011000.1 289895 291739 D thiol:disulfide interchange protein DsbD 289895..291739 Burkholderia cenocepacia J2315 6933462 YP_002229431.1 CDS hemB NC_011000.1 291869 292867 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(291869..292867) Burkholderia cenocepacia J2315 6933521 YP_002229432.1 CDS engB NC_011000.1 293120 293779 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(293120..293779) Burkholderia cenocepacia J2315 6933697 YP_002229433.1 CDS BCAL0266 NC_011000.1 293994 294647 D putative cytochrome c4 293994..294647 Burkholderia cenocepacia J2315 6933533 YP_002229434.1 CDS BCAL0267 NC_011000.1 294848 297061 D putative cytochrome c biogenesis protein 294848..297061 Burkholderia cenocepacia J2315 6930840 YP_002229435.1 CDS BCAL0268 NC_011000.1 297066 298256 D putative cytochrome c biogenesis protein 297066..298256 Burkholderia cenocepacia J2315 6930841 YP_002229436.1 CDS BCAL0269 NC_011000.1 298415 299410 D in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 298415..299410 Burkholderia cenocepacia J2315 6930842 YP_002229437.1 CDS BCAL0270 NC_011000.1 299431 300117 D in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 299431..300117 Burkholderia cenocepacia J2315 6930843 YP_002229438.1 CDS BCAL0272 NC_011000.1 300200 300475 R putative lipoprotein complement(300200..300475) Burkholderia cenocepacia J2315 6930844 YP_002229439.1 CDS cyaY NC_011000.1 300512 300838 D defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 300512..300838 Burkholderia cenocepacia J2315 6930845 YP_002229440.1 CDS mrcA NC_011000.1 300917 303304 R penicillin-binding protein 1A complement(300917..303304) Burkholderia cenocepacia J2315 6933463 YP_002229441.1 CDS BCAL0275 NC_011000.1 303531 304454 D hypothetical protein 303531..304454 Burkholderia cenocepacia J2315 6933846 YP_002229442.1 CDS BCAL0276 NC_011000.1 304451 305095 D putative type IV pilus assembly protein 304451..305095 Burkholderia cenocepacia J2315 6930846 YP_002229443.1 CDS BCAL0277 NC_011000.1 305092 305958 D hypothetical protein 305092..305958 Burkholderia cenocepacia J2315 6930847 YP_002229444.1 CDS BCAL0278 NC_011000.1 305955 307580 D C-terminial region is similar to the C-terminus of Francisella novicida PilQ UniProt:Q09WI1 (EMBL:DQ230372 (594 aa) fasta scores: E()=5.8e-35, 32.930% id in 413 aa; putative type IV pilus secretin 305955..307580 Burkholderia cenocepacia J2315 6930848 YP_002229445.1 CDS aroK NC_011000.1 307621 308175 D catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 307621..308175 Burkholderia cenocepacia J2315 6930849 YP_002229446.1 CDS aroB NC_011000.1 308172 309251 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 308172..309251 Burkholderia cenocepacia J2315 6933316 YP_002229447.1 CDS BCAL0281 NC_011000.1 309350 310501 D dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 309350..310501 Burkholderia cenocepacia J2315 6933312 YP_002229448.1 CDS BCAL0282 NC_011000.1 310590 311924 D with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 310590..311924 Burkholderia cenocepacia J2315 6930850 YP_002229449.1 CDS BCAL0283 NC_011000.1 312021 312905 D putative ABC transporter permease 312021..312905 Burkholderia cenocepacia J2315 6930851 YP_002229450.1 CDS BCAL0284 NC_011000.1 312902 313747 D with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 312902..313747 Burkholderia cenocepacia J2315 6930852 YP_002229451.1 CDS ugpC NC_011000.1 313779 314864 D part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 313779..314864 Burkholderia cenocepacia J2315 6930853 YP_002229452.1 CDS ugpQ NC_011000.1 314891 315661 D hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; cytoplasmic glycerophosphodiester phosphodiesterase 314891..315661 Burkholderia cenocepacia J2315 6930854 YP_002229453.1 CDS BCAL0287 NC_011000.1 315844 316575 R putative outer membrane protein complement(315844..316575) Burkholderia cenocepacia J2315 6934218 YP_002229454.1 CDS BCAL0288 NC_011000.1 316769 317482 D hypothetical protein 316769..317482 Burkholderia cenocepacia J2315 6930855 YP_002229455.1 CDS glt1 NC_011000.1 317651 322474 D family C44 cysteine peptidase; glutamate synthase large subunit 317651..322474 Burkholderia cenocepacia J2315 6930856 YP_002229456.1 CDS gltD NC_011000.1 322560 324026 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 322560..324026 Burkholderia cenocepacia J2315 6933649 YP_002229457.1 CDS BCAL0291 NC_011000.1 324402 325892 D sodium:amino acid symporter family protein 324402..325892 Burkholderia cenocepacia J2315 6933650 YP_002229458.1 CDS BCAL0292 NC_011000.1 325889 326455 D 2',5' RNA ligase family protein 325889..326455 Burkholderia cenocepacia J2315 6930857 YP_002229459.1 CDS BCAL0293 NC_011000.1 326488 327771 R putative D-amino acid dehydrogenase subunit complement(326488..327771) Burkholderia cenocepacia J2315 6930858 YP_002229460.1 CDS BCAL0294 NC_011000.1 327797 329059 R major facilitator superfamily protein complement(327797..329059) Burkholderia cenocepacia J2315 6930859 YP_002229461.1 CDS BCAL0295 NC_011000.1 329188 329964 R putative dehydrogenase/reductase complement(329188..329964) Burkholderia cenocepacia J2315 6930860 YP_002229462.1 CDS BCAL0296 NC_011000.1 329961 331730 R ABC transporter ATP-binding membrane protein complement(329961..331730) Burkholderia cenocepacia J2315 6930861 YP_002229463.1 CDS thiO NC_011000.1 332350 333486 D putative thiamine biosynthesis oxidoreductase ThiO 332350..333486 Burkholderia cenocepacia J2315 6933339 YP_002229464.1 CDS thiS NC_011000.1 333519 333716 D with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 333519..333716 Burkholderia cenocepacia J2315 6934183 YP_002229465.1 CDS thiG NC_011000.1 333755 334570 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 333755..334570 Burkholderia cenocepacia J2315 6934184 YP_002229466.1 CDS thiE NC_011000.1 334567 335691 D thiamine-phosphate pyrophosphorylase 334567..335691 Burkholderia cenocepacia J2315 6934182 YP_002229467.1 CDS BCAL0301 NC_011000.1 335776 336597 D ABC transporter ATP-binding protein 335776..336597 Burkholderia cenocepacia J2315 6934181 YP_002229468.1 CDS BCAL0302 NC_011000.1 336594 337361 D hypothetical protein 336594..337361 Burkholderia cenocepacia J2315 6930863 YP_002229469.1 CDS BCAL0303 NC_011000.1 337386 337946 D hypothetical protein 337386..337946 Burkholderia cenocepacia J2315 6930864 YP_002229470.1 CDS BCAL0304 NC_011000.1 337972 338940 D VacJ-like lipoprotein 337972..338940 Burkholderia cenocepacia J2315 6930865 YP_002229471.1 CDS BCAL0305 NC_011000.1 339052 339681 D hypothetical protein 339052..339681 Burkholderia cenocepacia J2315 6930866 YP_002229472.1 CDS BCAL0306 NC_011000.1 339678 339953 D hypothetical protein 339678..339953 Burkholderia cenocepacia J2315 6930867 YP_002229473.1 CDS BCAL0307 NC_011000.1 340146 341072 D ABC transporter ATP-binding protein 340146..341072 Burkholderia cenocepacia J2315 6930868 YP_002229474.1 CDS BCAL0308 NC_011000.1 341069 341890 D ABC transporter membrane protein 341069..341890 Burkholderia cenocepacia J2315 6930869 YP_002229475.1 CDS BCAL0309 NC_011000.1 341944 342183 D BolA-like protein 341944..342183 Burkholderia cenocepacia J2315 6930870 YP_002229476.1 CDS murA NC_011000.1 342198 343547 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 342198..343547 Burkholderia cenocepacia J2315 6930871 YP_002229477.1 CDS hisG NC_011000.1 343544 344197 D short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 343544..344197 Burkholderia cenocepacia J2315 6933857 YP_002229478.1 CDS hisD NC_011000.1 344222 345538 D catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 344222..345538 Burkholderia cenocepacia J2315 6933714 YP_002229479.1 CDS hisC NC_011000.1 345637 346710 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 345637..346710 Burkholderia cenocepacia J2315 6933711 YP_002229480.1 CDS hisB NC_011000.1 346776 347363 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 346776..347363 Burkholderia cenocepacia J2315 6933710 YP_002229481.1 CDS BCAL0315 NC_011000.1 347425 348045 D MarC-family integral membrane protein 347425..348045 Burkholderia cenocepacia J2315 6933709 YP_002229482.1 CDS hisH NC_011000.1 348042 348683 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 348042..348683 Burkholderia cenocepacia J2315 6930872 YP_002229483.1 CDS hisA NC_011000.1 348847 349602 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 348847..349602 Burkholderia cenocepacia J2315 6933715 YP_002229484.1 CDS hisF NC_011000.1 349709 350482 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 349709..350482 Burkholderia cenocepacia J2315 6933708 YP_002229485.1 CDS hisI NC_011000.1 350482 350898 D PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 350482..350898 Burkholderia cenocepacia J2315 6933713 YP_002229486.1 CDS hisE NC_011000.1 350895 351260 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 350895..351260 Burkholderia cenocepacia J2315 6933716 YP_002229487.1 CDS BCAL0321 NC_011000.1 351331 351723 D hypothetical protein 351331..351723 Burkholderia cenocepacia J2315 6933712 YP_002229488.1 CDS BCAL0322 NC_011000.1 351755 352120 D hypothetical protein 351755..352120 Burkholderia cenocepacia J2315 6930873 YP_002229489.1 CDS tatA NC_011000.1 352214 352444 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 352214..352444 Burkholderia cenocepacia J2315 6930874 YP_002229490.1 CDS tatB NC_011000.1 352471 353010 D sec-independent translocase 352471..353010 Burkholderia cenocepacia J2315 6934167 YP_002229491.1 CDS tatC NC_011000.1 353052 353840 D Sec-independent protein translocase protein TatC 353052..353840 Burkholderia cenocepacia J2315 6934168 YP_002229492.1 CDS BCAL0326 NC_011000.1 354050 355255 R subfamily S1B serine peptidase complement(354050..355255) Burkholderia cenocepacia J2315 6934169 YP_002229493.1 CDS BCAL0327 NC_011000.1 355277 356023 D hypothetical protein 355277..356023 Burkholderia cenocepacia J2315 6930875 YP_002229494.1 CDS petA NC_011000.1 356242 356862 D ubiquinol-cytochrome c reductase iron-sulfur subunit 356242..356862 Burkholderia cenocepacia J2315 6930876 YP_002229495.1 CDS petB NC_011000.1 356862 358244 D cytochrome b 356862..358244 Burkholderia cenocepacia J2315 6933942 YP_002229496.1 CDS petC NC_011000.1 358266 359024 D cytochrome c1 358266..359024 Burkholderia cenocepacia J2315 6933943 YP_002229497.1 CDS BCAL0331 NC_011000.1 359119 359730 D putative stringent starvation protein A 359119..359730 Burkholderia cenocepacia J2315 6933944 YP_002229498.1 CDS BCAL0332 NC_011000.1 359799 360323 D ClpXP protease specificity-enhancing factor 359799..360323 Burkholderia cenocepacia J2315 6930877 YP_002229499.1 CDS BCAL0333 NC_011000.1 360772 360975 D hypothetical protein 360772..360975 Burkholderia cenocepacia J2315 6933340 YP_002229500.1 CDS BCAL0334 NC_011000.1 361085 361885 R periplasmic solute-binding protein complement(361085..361885) Burkholderia cenocepacia J2315 6930879 YP_002229501.1 CDS BCAL0335 NC_011000.1 362167 362484 D hypothetical protein 362167..362484 Burkholderia cenocepacia J2315 6930880 YP_002229502.1 CDS BCAL0336 NC_011000.1 362566 362901 D hypothetical protein 362566..362901 Burkholderia cenocepacia J2315 6930881 YP_002229503.1 CDS BCAL0337 NC_011000.1 363015 363797 R putative type VI secretion system protein TssL complement(363015..363797) Burkholderia cenocepacia J2315 6930882 YP_002229504.1 CDS BCAL0338 NC_011000.1 363794 365140 R putative type VI secretion system protein TssK complement(363794..365140) Burkholderia cenocepacia J2315 6930883 YP_002229505.1 CDS BCAL0339 NC_011000.1 365246 365845 R putative type VI secretion system protein TssJ complement(365246..365845) Burkholderia cenocepacia J2315 6930884 YP_002229506.1 CDS BCAL0340 NC_011000.1 366232 366858 D putative lipoprotein 366232..366858 Burkholderia cenocepacia J2315 6930885 YP_002229507.1 CDS BCAL0341 NC_011000.1 366905 367420 D putative type VI secretion system protein TssB 366905..367420 Burkholderia cenocepacia J2315 6930886 YP_002229508.1 CDS BCAL0342 NC_011000.1 367436 368926 D putative type VI secretion system protein TssC 367436..368926 Burkholderia cenocepacia J2315 6930887 YP_002229509.1 CDS BCAL0343 NC_011000.1 368997 369500 D putative type VI secretion system protein TssD 368997..369500 Burkholderia cenocepacia J2315 6930888 YP_002229510.1 CDS BCAL0344 NC_011000.1 369563 370048 D putative type VI secretion system protein TssE 369563..370048 Burkholderia cenocepacia J2315 6930889 YP_002229511.1 CDS BCAL0345 NC_011000.1 370125 371960 D putative type VI secretion system protein TssF 370125..371960 Burkholderia cenocepacia J2315 6930890 YP_002229512.1 CDS BCAL0346 NC_011000.1 371924 373024 D putative type VI secretion system protein TssG 371924..373024 Burkholderia cenocepacia J2315 6930891 YP_002229513.1 CDS clpB NC_011000.1 373066 375735 D putative type VI secretion system protein TssH 373066..375735 Burkholderia cenocepacia J2315 6930892 YP_002229514.1 CDS BCAL0348 NC_011000.1 375780 376901 D putative type VI secretion system protein TssA 375780..376901 Burkholderia cenocepacia J2315 6933437 YP_002229515.1 CDS BCAL0349 NC_011000.1 376995 377945 R putative outer membrane protein complement(376995..377945) Burkholderia cenocepacia J2315 6930893 YP_002229516.1 CDS BCAL0350 NC_011000.1 377950 378939 R hypothetical protein complement(377950..378939) Burkholderia cenocepacia J2315 6930894 YP_002229517.1 CDS BCAL0351 NC_011000.1 378936 382880 R putative type VI secretion system protein TssM complement(378936..382880) Burkholderia cenocepacia J2315 6930895 YP_002229518.1 CDS BCAL0352 NC_011000.1 383182 384027 R subfamily M15C metallo peptidase; subfamily M15C metalopeptidase complement(383182..384027) Burkholderia cenocepacia J2315 6930896 YP_002229519.1 CDS BCAL0353 NC_011000.1 384149 385141 D hypothetical protein 384149..385141 Burkholderia cenocepacia J2315 6930897 YP_002229520.1 CDS BCAL0354 NC_011000.1 385353 386381 D putative cation transporter 385353..386381 Burkholderia cenocepacia J2315 6930898 YP_002229521.1 CDS BCAL0356 NC_011000.1 386586 387563 R putative quinone oxidoreductase complement(386586..387563) Burkholderia cenocepacia J2315 6930900 YP_002229522.1 CDS BCAL0357 NC_011000.1 387689 388645 D LysR family regulatory protein 387689..388645 Burkholderia cenocepacia J2315 6930901 YP_002229523.1 CDS BCAL0358 NC_011000.1 388768 390936 R family M1 metallo peptidase; family M1 metalopeptidase complement(388768..390936) Burkholderia cenocepacia J2315 6930902 YP_002229524.1 CDS BCAL0359 NC_011000.1 391579 392073 D putative lipoprotein 391579..392073 Burkholderia cenocepacia J2315 6930903 YP_002229525.1 CDS BCAL0360 NC_011000.1 392228 392560 D hypothetical protein 392228..392560 Burkholderia cenocepacia J2315 6930904 YP_002229526.1 CDS BCAL0361 NC_011000.1 392698 393831 D putative methyltransferase 392698..393831 Burkholderia cenocepacia J2315 6930905 YP_002229527.1 CDS BCAL0362 NC_011000.1 393921 394811 D hypothetical protein 393921..394811 Burkholderia cenocepacia J2315 6930906 YP_002229528.1 CDS BCAL0363 NC_011000.1 394872 395444 R hypothetical protein complement(394872..395444) Burkholderia cenocepacia J2315 6930907 YP_002229529.1 CDS BCAL0364 NC_011000.1 395521 396141 R TetR family regulatory protein complement(395521..396141) Burkholderia cenocepacia J2315 6930908 YP_002229530.1 CDS BCAL0365 NC_011000.1 396361 397644 D major facilitator superfamily protein 396361..397644 Burkholderia cenocepacia J2315 6930909 YP_002229531.1 CDS BCAL0366 NC_011000.1 397800 398405 D nitroreductase family protein 397800..398405 Burkholderia cenocepacia J2315 6930910 YP_002229532.1 CDS BCAL0367 NC_011000.1 398595 399845 D putative chaperone protein 398595..399845 Burkholderia cenocepacia J2315 6930911 YP_002229533.1 CDS cspD NC_011000.1 399947 400150 R cold shock-like protein CspD complement(399947..400150) Burkholderia cenocepacia J2315 6930912 YP_002229534.1 CDS BCAL0369 NC_011000.1 400571 402169 D putative amino acid permease 400571..402169 Burkholderia cenocepacia J2315 6933460 YP_002229535.1 CDS BCAL0370 NC_011000.1 402281 403072 R putative dioxygenase subunit complement(402281..403072) Burkholderia cenocepacia J2315 6930913 YP_002229536.1 CDS BCAL0371 NC_011000.1 403275 403871 R catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(403275..403871) Burkholderia cenocepacia J2315 6930914 YP_002229537.1 CDS BCAL0372 NC_011000.1 403896 404207 R putative glutaredoxin complement(403896..404207) Burkholderia cenocepacia J2315 6930915 YP_002229538.1 CDS hemK NC_011000.1 404275 405117 R protein methyltransferase HemK complement(404275..405117) Burkholderia cenocepacia J2315 6930916 YP_002229539.1 CDS prfA NC_011000.1 405125 406207 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(405125..406207) Burkholderia cenocepacia J2315 6933701 YP_002229540.1 CDS hemA NC_011000.1 406300 407598 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(406300..407598) Burkholderia cenocepacia J2315 6933985 YP_002229541.1 CDS BCAL0376 NC_011000.1 407625 408389 R two-component regulatory system, response regulator protein complement(407625..408389) Burkholderia cenocepacia J2315 6933696 YP_002229542.1 CDS BCAL0376a NC_011000.1 408561 408815 D hypothetical protein 408561..408815 Burkholderia cenocepacia J2315 6930917 YP_002229543.1 CDS BCAL0377 NC_011000.1 408834 410648 D subfamily M24B metallo peptidase; subfamily M24B metalopeptidase 408834..410648 Burkholderia cenocepacia J2315 6930918 YP_002229544.1 CDS BCAL0378 NC_011000.1 410746 411297 D putative hydrolase 410746..411297 Burkholderia cenocepacia J2315 6930919 YP_002229545.1 CDS BCAL0379 NC_011000.1 411294 411917 D putative hydrolase 411294..411917 Burkholderia cenocepacia J2315 6930920 YP_002229546.1 CDS BCAL0380 NC_011000.1 412058 413725 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(412058..413725) Burkholderia cenocepacia J2315 6930921 YP_002229547.1 CDS BCAL0381 NC_011000.1 413894 414202 R putative lipoprotein complement(413894..414202) Burkholderia cenocepacia J2315 6930922 YP_002229548.1 CDS BCAL0382 NC_011000.1 414292 415209 R LysR family regulatory protein complement(414292..415209) Burkholderia cenocepacia J2315 6930923 YP_002229549.1 CDS BCAL0383 NC_011000.1 415379 416671 D major facilitator superfamily protein 415379..416671 Burkholderia cenocepacia J2315 6930924 YP_002229550.1 CDS BCAL0384 NC_011000.1 416753 417100 D hypothetical protein 416753..417100 Burkholderia cenocepacia J2315 6930925 YP_002229551.1 CDS BCAL0385 NC_011000.1 417477 418868 D putative amino acid permease 417477..418868 Burkholderia cenocepacia J2315 6930926 YP_002229552.1 CDS BCAL0386 NC_011000.1 419122 420333 D putative exported metallo-beta-lactamase superfamily protein 419122..420333 Burkholderia cenocepacia J2315 6930927 YP_002229553.1 CDS BCAL0387 NC_011000.1 420407 421501 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(420407..421501) Burkholderia cenocepacia J2315 6930928 YP_002229554.1 CDS BCAL0388 NC_011000.1 421748 422926 D ubiquinone biosynthesis hydroxylase family protein 421748..422926 Burkholderia cenocepacia J2315 6930929 YP_002229555.1 CDS dsbC NC_011000.1 423017 423745 D thiol:disulfide interchange protein DsbC 423017..423745 Burkholderia cenocepacia J2315 6930930 YP_002229556.1 CDS BCAL0390 NC_011000.1 423851 425650 D family M61 metallo peptidase; family M61 metalopeptidase 423851..425650 Burkholderia cenocepacia J2315 6933520 YP_002229557.1 CDS acpD NC_011000.1 425798 426394 D acyl carrier protein phosphodiesterase 425798..426394 Burkholderia cenocepacia J2315 6930931 YP_002229558.1 CDS BCAL0392 NC_011000.1 426509 427033 D putative transposase 426509..427033 Burkholderia cenocepacia J2315 6933283 YP_002229559.1 CDS BCAL0393 NC_011000.1 427033 427869 D putative transposase 427033..427869 Burkholderia cenocepacia J2315 6930932 YP_002229560.1 CDS ung NC_011000.1 427963 428823 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(427963..428823) Burkholderia cenocepacia J2315 6930933 YP_002229561.1 CDS BCAL0395 NC_011000.1 428894 429520 R putative adenylate cyclase complement(428894..429520) Burkholderia cenocepacia J2315 6934219 YP_002229562.1 CDS trpC NC_011000.1 429520 430305 R involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase complement(429520..430305) Burkholderia cenocepacia J2315 6930934 YP_002229563.1 CDS trpD NC_011000.1 430334 431365 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(430334..431365) Burkholderia cenocepacia J2315 6934200 YP_002229564.1 CDS trpG NC_011000.1 431379 431978 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(431379..431978) Burkholderia cenocepacia J2315 6934201 YP_002229565.1 CDS trpE NC_011000.1 431992 433485 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(431992..433485) Burkholderia cenocepacia J2315 6934203 YP_002229566.1 CDS BCAL0400 NC_011000.1 433843 434607 R putative phosphoglycolate phosphatase complement(433843..434607) Burkholderia cenocepacia J2315 6934202 YP_002229567.1 CDS BCAL0401 NC_011000.1 434612 435298 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(434612..435298) Burkholderia cenocepacia J2315 6930935 YP_002229568.1 CDS apaG NC_011000.1 435477 435851 D protein associated with Co2+ and Mg2+ efflux; ApaG protein 435477..435851 Burkholderia cenocepacia J2315 6930936 YP_002229569.1 CDS BCAL0403 NC_011000.1 436015 437169 D putative outer membrane-bound lytic murein transglycosylase 436015..437169 Burkholderia cenocepacia J2315 6930937 YP_002229570.1 CDS paaK NC_011000.1 437425 438723 R phenylacetate-coenzyme A ligase complement(437425..438723) Burkholderia cenocepacia J2315 6930938 YP_002229571.1 CDS paaI NC_011000.1 438762 439214 R phenylacetic acid degradation protein PaaI complement(438762..439214) Burkholderia cenocepacia J2315 6933924 YP_002229572.1 CDS paaG NC_011000.1 439216 440007 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(439216..440007) Burkholderia cenocepacia J2315 6933923 YP_002229573.1 CDS pcaF NC_011000.1 440053 441255 R catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase complement(440053..441255) Burkholderia cenocepacia J2315 6933922 YP_002229574.1 CDS paaZ NC_011000.1 441343 443049 R putative phenylacetic acid degradation oxidoreductase complement(441343..443049) Burkholderia cenocepacia J2315 6933932 YP_002229575.1 CDS paaF NC_011000.1 443179 443955 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 443179..443955 Burkholderia cenocepacia J2315 6933925 YP_002229576.1 CDS BCAL0409a NC_011000.1 449975 450307 R hypothetical protein complement(449975..450307) Burkholderia cenocepacia J2315 6933342 YP_002229577.1 CDS BCAL0410 NC_011000.1 450442 450705 D transposase 450442..450705 Burkholderia cenocepacia J2315 6930939 YP_002229578.1 CDS BCAL0413 NC_011000.1 452305 453675 D C-terminus is similar to the N-terminus of Clostridium tetani conserved protein ctc02236 SWALL:Q891X7 (EMBL:AE015943) (384 aa) fasta scores: E(): 1.2, 30.12% id in 156 aa; hypothetical protein 452305..453675 Burkholderia cenocepacia J2315 6930942 YP_002229579.1 CDS BCAL0416 NC_011000.1 456017 456280 R transposase complement(456017..456280) Burkholderia cenocepacia J2315 6930944 YP_002229580.1 CDS BCAL0418 NC_011000.1 457536 458870 D type I restriction enzyme specificity protein 457536..458870 Burkholderia cenocepacia J2315 6930945 YP_002229581.1 CDS BCAL0419 NC_011000.1 458867 459997 D hypothetical protein 458867..459997 Burkholderia cenocepacia J2315 6930946 YP_002229582.1 CDS BCAL0420 NC_011000.1 459990 463085 D type I restriction component of type I restriction-modification system 459990..463085 Burkholderia cenocepacia J2315 6930947 YP_002229583.1 CDS gyrB NC_011000.1 463355 465829 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B complement(463355..465829) Burkholderia cenocepacia J2315 6930948 YP_002229584.1 CDS dnaN NC_011000.1 466021 467127 R binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta complement(466021..467127) Burkholderia cenocepacia J2315 6930949 YP_002229585.1 CDS dnaA NC_011000.1 467298 468875 R binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein complement(467298..468875) Burkholderia cenocepacia J2315 6933510 YP_002229586.1 CDS rpmH NC_011000.1 469297 469431 D in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 469297..469431 Burkholderia cenocepacia J2315 6933504 YP_002229587.1 CDS rnpA NC_011000.1 469447 469908 D Possible alternative translational start sites; ribonuclease P protein component 469447..469908 Burkholderia cenocepacia J2315 6934089 YP_002229588.1 CDS BCAL0425 NC_011000.1 469984 470250 D hypothetical protein 469984..470250 Burkholderia cenocepacia J2315 6934055 YP_002229589.1 CDS BCAL0426 NC_011000.1 470259 471917 D functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 470259..471917 Burkholderia cenocepacia J2315 6930950 YP_002229590.1 CDS BCAL0427 NC_011000.1 472042 472518 R hypothetical protein complement(472042..472518) Burkholderia cenocepacia J2315 6930951 YP_002229591.1 CDS trmE NC_011000.1 472814 474208 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 472814..474208 Burkholderia cenocepacia J2315 6930952 YP_002229592.1 CDS BCAL0430 NC_011000.1 474626 475984 R putative diguanylate cyclase complement(474626..475984) Burkholderia cenocepacia J2315 6934198 YP_002229593.1 CDS BCAL0431 NC_011000.1 476094 476342 R hypothetical protein complement(476094..476342) Burkholderia cenocepacia J2315 6930953 YP_002229594.1 CDS BCAL0432 NC_011000.1 476458 476628 R hypothetical protein complement(476458..476628) Burkholderia cenocepacia J2315 6930954 YP_002229595.1 CDS speG NC_011000.1 476774 477337 D spermidine N(1)-acetyltransferase 476774..477337 Burkholderia cenocepacia J2315 6930955 YP_002229596.1 CDS BCAL0434 NC_011000.1 477828 478172 D hypothetical protein 477828..478172 Burkholderia cenocepacia J2315 6934150 YP_002229597.1 CDS BCAL0435 NC_011000.1 478361 478915 D hypothetical protein 478361..478915 Burkholderia cenocepacia J2315 6930956 YP_002229598.1 CDS BCAL0436 NC_011000.1 478937 479350 R glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein complement(478937..479350) Burkholderia cenocepacia J2315 6930957 YP_002229599.1 CDS BCAL0437 NC_011000.1 479782 480873 D O6-methylguanine-DNA methyltransferase 479782..480873 Burkholderia cenocepacia J2315 6930958 YP_002229600.1 CDS BCAL0438 NC_011000.1 480870 481829 D putative DNA-3-methyladenine glycosylase II 480870..481829 Burkholderia cenocepacia J2315 6930959 YP_002229601.1 CDS BCAL0439 NC_011000.1 482307 483908 D involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 482307..483908 Burkholderia cenocepacia J2315 6930960 YP_002229602.1 CDS BCAL0440 NC_011000.1 483996 484313 R hypothetical protein complement(483996..484313) Burkholderia cenocepacia J2315 6930961 YP_002229603.1 CDS BCAL0441 NC_011000.1 484736 486376 D putative L-lactate permease 484736..486376 Burkholderia cenocepacia J2315 6930962 YP_002229604.1 CDS BCAL0442 NC_011000.1 486473 487408 R LysR family regulatory protein complement(486473..487408) Burkholderia cenocepacia J2315 6930963 YP_002229605.1 CDS BCAL0443 NC_011000.1 487638 489809 D putative phospholipase C 487638..489809 Burkholderia cenocepacia J2315 6930964 YP_002229606.1 CDS BCAL0444 NC_011000.1 490005 490730 D GntR family regulatory protein 490005..490730 Burkholderia cenocepacia J2315 6930965 YP_002229607.1 CDS BCAL0445 NC_011000.1 490830 492218 R putative oxidoreductase complement(490830..492218) Burkholderia cenocepacia J2315 6930966 YP_002229608.1 CDS BCAL0446 NC_011000.1 492314 493444 R catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate; 2-aminoethylphosphonate--pyruvate transaminase complement(492314..493444) Burkholderia cenocepacia J2315 6930967 YP_002229609.1 CDS BCAL0447 NC_011000.1 493492 495219 R binding-protein-dependent transport system inner membrane protein complement(493492..495219) Burkholderia cenocepacia J2315 6930968 YP_002229610.1 CDS BCAL0448 NC_011000.1 495216 496298 R ABC transporter ATP-binding protein complement(495216..496298) Burkholderia cenocepacia J2315 6930969 YP_002229611.1 CDS BCAL0449 NC_011000.1 496396 497451 R extracellular solute-binding protein complement(496396..497451) Burkholderia cenocepacia J2315 6930970 YP_002229612.1 CDS BCAL0450 NC_011000.1 497652 498899 D putative phosphonoacetate hydrolase 497652..498899 Burkholderia cenocepacia J2315 6930971 YP_002229613.1 CDS BCAL0451 NC_011000.1 498929 500383 D Similar to BCAM1186, 96.488% identity (96.488% ungapped) in 484 aa overlap (1-484:1-484), and BCAM2493, 68.153% identity (68.153% ungapped) in 471 aa overlap (14-484:12-482); putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 498929..500383 Burkholderia cenocepacia J2315 6930972 YP_002229614.1 CDS BCAL0452 NC_011000.1 500563 501345 D periplasmic solute-binding protein 500563..501345 Burkholderia cenocepacia J2315 6930973 YP_002229615.1 CDS BCAL0453 NC_011000.1 501360 502040 D putative amino acid ABC transporter permease 501360..502040 Burkholderia cenocepacia J2315 6930974 YP_002229616.1 CDS BCAL0454 NC_011000.1 502037 502795 D putative amino acid ABC transporter ATP-binding protein 502037..502795 Burkholderia cenocepacia J2315 6930975 YP_002229617.1 CDS BCAL0455 NC_011000.1 502820 503635 R family S33 serine peptidase; putative hydrolase complement(502820..503635) Burkholderia cenocepacia J2315 6930976 YP_002229618.1 CDS BCAL0456 NC_011000.1 503718 504332 D hypothetical protein 503718..504332 Burkholderia cenocepacia J2315 6930977 YP_002229619.1 CDS BCAL0457 NC_011000.1 504369 505274 R hypothetical protein complement(504369..505274) Burkholderia cenocepacia J2315 6930978 YP_002229620.1 CDS BCAL0458 NC_011000.1 505873 506277 D thioesterase superfamily protein 505873..506277 Burkholderia cenocepacia J2315 6933343 YP_002229621.1 CDS BCAL0459 NC_011000.1 506286 507152 D putative patatin-like phospholipase 506286..507152 Burkholderia cenocepacia J2315 6930980 YP_002229622.1 CDS BCAL0460 NC_011000.1 507201 508214 R D-isomer specific 2-hydroxyacid dehydrogenase complement(507201..508214) Burkholderia cenocepacia J2315 6930981 YP_002229623.1 CDS BCAL0461 NC_011000.1 508642 509691 D LysR family regulatory protein 508642..509691 Burkholderia cenocepacia J2315 6930982 YP_002229624.1 CDS BCAL0462 NC_011000.1 509823 512420 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(509823..512420) Burkholderia cenocepacia J2315 6930983 YP_002229625.1 CDS BCAL0463 NC_011000.1 512613 512993 R putative thioredoxin complement(512613..512993) Burkholderia cenocepacia J2315 6930984 YP_002229626.1 CDS BCAL0464 NC_011000.1 513030 514343 R SMF family protein complement(513030..514343) Burkholderia cenocepacia J2315 6930985 YP_002229627.1 CDS def NC_011000.1 514529 515032 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 514529..515032 Burkholderia cenocepacia J2315 6930986 YP_002229628.1 CDS fmt NC_011000.1 515067 516059 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 515067..516059 Burkholderia cenocepacia J2315 6933500 YP_002229629.1 CDS BCAL0467 NC_011000.1 516180 516821 D putative LysE type translocator protein 516180..516821 Burkholderia cenocepacia J2315 6933600 YP_002229630.1 CDS BCAL0468 NC_011000.1 516921 517778 D subfamily M48B metallo peptidase; M48 family peptidase 516921..517778 Burkholderia cenocepacia J2315 6930987 YP_002229631.1 CDS rsmB NC_011000.1 517999 519390 D ribosomal RNA small subunit methyltransferase B 517999..519390 Burkholderia cenocepacia J2315 6930988 YP_002229632.1 CDS BCAL0470 NC_011000.1 519387 519977 D hypothetical protein 519387..519977 Burkholderia cenocepacia J2315 6934125 YP_002229633.1 CDS BCAL0471 NC_011000.1 520018 522381 D two-component regulatory system, sensor kinase protein 520018..522381 Burkholderia cenocepacia J2315 6930989 YP_002229634.1 CDS BCAL0472 NC_011000.1 522382 523083 D two-component regulatory system, response regulator protein 522382..523083 Burkholderia cenocepacia J2315 6930990 YP_002229635.1 CDS BCAL0473 NC_011000.1 523571 524305 D putative putative transcriptional regulator 523571..524305 Burkholderia cenocepacia J2315 6933344 YP_002229636.1 CDS BCAL0474 NC_011000.1 524381 525013 D hypothetical protein 524381..525013 Burkholderia cenocepacia J2315 6930992 YP_002229637.1 CDS BCAL0475 NC_011000.1 525032 525484 D putative 6-pyruvoyl tetrahydropterin synthase 525032..525484 Burkholderia cenocepacia J2315 6930993 YP_002229638.1 CDS BCAL0476 NC_011000.1 525811 526596 D HpcH/HpaI aldolase/citrate lyase family protein 525811..526596 Burkholderia cenocepacia J2315 6930994 YP_002229639.1 CDS BCAL0477 NC_011000.1 526593 527345 D hypothetical protein 526593..527345 Burkholderia cenocepacia J2315 6930995 YP_002229640.1 CDS rodA NC_011000.1 527424 528572 R rod shape-determining protein complement(527424..528572) Burkholderia cenocepacia J2315 6930996 YP_002229641.1 CDS mrdA NC_011000.1 528584 530716 R penicillin-binding protein complement(528584..530716) Burkholderia cenocepacia J2315 6934056 YP_002229642.1 CDS BCAL0480 NC_011000.1 530818 531330 R putative rod shape-determining protein complement(530818..531330) Burkholderia cenocepacia J2315 6933847 YP_002229643.1 CDS BCAL0481 NC_011000.1 531327 532391 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(531327..532391) Burkholderia cenocepacia J2315 6930997 YP_002229644.1 CDS mreB NC_011000.1 532530 533573 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(532530..533573) Burkholderia cenocepacia J2315 6930998 YP_002229645.1 CDS gatC NC_011000.1 533941 534240 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 533941..534240 Burkholderia cenocepacia J2315 6933848 YP_002229646.1 CDS gatA NC_011000.1 534310 535800 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 534310..535800 Burkholderia cenocepacia J2315 6933622 YP_002229647.1 CDS gatB NC_011000.1 535805 537280 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 535805..537280 Burkholderia cenocepacia J2315 6933620 YP_002229648.1 CDS BCAL0486 NC_011000.1 537399 538238 D putative polyphosphate kinase 537399..538238 Burkholderia cenocepacia J2315 6933621 YP_002229649.1 CDS BCAL0487 NC_011000.1 538279 539052 D endonuclease/exonuclease/phosphatase family protein 538279..539052 Burkholderia cenocepacia J2315 6930999 YP_002229650.1 CDS BCAL0488 NC_011000.1 539160 540212 R putative alcohol dehydrogenase complement(539160..540212) Burkholderia cenocepacia J2315 6931000 YP_002229651.1 CDS BCAL0489 NC_011000.1 540439 541383 D AraC family regulatory protein 540439..541383 Burkholderia cenocepacia J2315 6931001 YP_002229652.1 CDS BCAL0490 NC_011000.1 541406 542446 R peptidase, family M48 complement(541406..542446) Burkholderia cenocepacia J2315 6931002 YP_002229653.1 CDS BCAL0491 NC_011000.1 542436 543857 R major facilitator superfamily protein complement(542436..543857) Burkholderia cenocepacia J2315 6931003 YP_002229654.1 CDS metW NC_011000.1 543974 544582 R methionine biosynthesis protein MetW complement(543974..544582) Burkholderia cenocepacia J2315 6931004 YP_002229655.1 CDS metX NC_011000.1 544579 545724 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(544579..545724) Burkholderia cenocepacia J2315 6933816 YP_002229656.1 CDS slmA NC_011000.1 545991 546656 R FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein complement(545991..546656) Burkholderia cenocepacia J2315 6933817 YP_002229657.1 CDS BCAL0495 NC_011000.1 546623 547414 R haloacid dehalogenase-like hydrolase complement(546623..547414) Burkholderia cenocepacia J2315 6931005 YP_002229658.1 CDS argB NC_011000.1 547411 548310 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(547411..548310) Burkholderia cenocepacia J2315 6931006 YP_002229659.1 CDS BCAL0497 NC_011000.1 548921 550351 D two-component regulatory system, sensor kinase protein 548921..550351 Burkholderia cenocepacia J2315 6933303 YP_002229660.1 CDS BCAL0499 NC_011000.1 550365 550907 D two-component regulatory system, response regulator protein 550365..550907 Burkholderia cenocepacia J2315 6931007 YP_002229661.1 CDS hslU NC_011000.1 550975 552318 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(550975..552318) Burkholderia cenocepacia J2315 6931008 YP_002229662.1 CDS hslV NC_011000.1 552328 552864 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(552328..552864) Burkholderia cenocepacia J2315 6933735 YP_002229663.1 CDS BCAL0502 NC_011000.1 553101 553517 R DksA/TraR C4-type zinc finger family protein complement(553101..553517) Burkholderia cenocepacia J2315 6933736 YP_002229664.1 CDS BCAL0503 NC_011000.1 554012 555091 R putative cobalamin synthesis protein complement(554012..555091) Burkholderia cenocepacia J2315 6931009 YP_002229665.1 CDS BCAL0504 NC_011000.1 555284 556498 R hypothetical protein complement(555284..556498) Burkholderia cenocepacia J2315 6931010 YP_002229666.1 CDS xerC NC_011000.1 556575 557495 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC complement(556575..557495) Burkholderia cenocepacia J2315 6931011 YP_002229667.1 CDS BCAL0506 NC_011000.1 557509 558258 R hypothetical protein complement(557509..558258) Burkholderia cenocepacia J2315 6934267 YP_002229668.1 CDS dapF NC_011000.1 558272 559201 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(558272..559201) Burkholderia cenocepacia J2315 6931012 YP_002229669.1 CDS BCAL0508 NC_011000.1 559498 560382 R Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase complement(559498..560382) Burkholderia cenocepacia J2315 6933493 YP_002229670.1 CDS metK NC_011000.1 560648 561835 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 560648..561835 Burkholderia cenocepacia J2315 6931013 YP_002229671.1 CDS BCAL0510 NC_011000.1 561947 562288 R hypothetical protein complement(561947..562288) Burkholderia cenocepacia J2315 6933815 YP_002229672.1 CDS BCAL0511 NC_011000.1 562641 563414 D putative deoxygenases 562641..563414 Burkholderia cenocepacia J2315 6931014 YP_002229673.1 CDS BCAL0512 NC_011000.1 563575 563781 R hypothetical protein complement(563575..563781) Burkholderia cenocepacia J2315 6931015 YP_002229674.1 CDS BCAL0513 NC_011000.1 563975 565018 D aldo/keto reductase family protein 563975..565018 Burkholderia cenocepacia J2315 6931016 YP_002229675.1 CDS BCAL0514 NC_011000.1 565125 565310 R hypothetical protein complement(565125..565310) Burkholderia cenocepacia J2315 6931017 YP_002229676.1 CDS BCAL0515 NC_011000.1 565664 566551 R hypothetical protein complement(565664..566551) Burkholderia cenocepacia J2315 6931018 YP_002229677.1 CDS BCAL0516 NC_011000.1 567360 567572 D hypothetical protein 567360..567572 Burkholderia cenocepacia J2315 6931019 YP_002229678.1 CDS BCAL0517 NC_011000.1 567629 568651 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 567629..568651 Burkholderia cenocepacia J2315 6931020 YP_002229679.1 CDS calB NC_011000.1 568718 570160 R putative coniferyl aldehyde dehydrogenase complement(568718..570160) Burkholderia cenocepacia J2315 6931021 YP_002229680.1 CDS BCAL0519 NC_011000.1 570887 572527 D putative GMC oxidoreductase 570887..572527 Burkholderia cenocepacia J2315 6933422 YP_002229681.1 CDS fliK NC_011000.1 572557 573915 R putative flagellar hook-length control protein FliK complement(572557..573915) Burkholderia cenocepacia J2315 6931022 YP_002229682.1 CDS fliJ NC_011000.1 573947 574405 R flagellar FliJ protein complement(573947..574405) Burkholderia cenocepacia J2315 6933591 YP_002229683.1 CDS fliI NC_011000.1 574411 575916 R flagellum-specific ATP synthase FliI complement(574411..575916) Burkholderia cenocepacia J2315 6933590 YP_002229684.1 CDS fliH NC_011000.1 575949 576632 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(575949..576632) Burkholderia cenocepacia J2315 6933589 YP_002229685.1 CDS fliG NC_011000.1 576625 577620 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(576625..577620) Burkholderia cenocepacia J2315 6933588 YP_002229686.1 CDS fliF NC_011000.1 577610 579373 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(577610..579373) Burkholderia cenocepacia J2315 6933587 YP_002229687.1 CDS fliE NC_011000.1 579622 579966 D flagellar hook-basal body complex protein FliE 579622..579966 Burkholderia cenocepacia J2315 6933586 YP_002229688.1 CDS fliS NC_011000.1 580206 580640 D flagellar protein FliS 580206..580640 Burkholderia cenocepacia J2315 6933585 YP_002229689.1 CDS BCAL0528 NC_011000.1 580637 580969 D hypothetical protein 580637..580969 Burkholderia cenocepacia J2315 6933599 YP_002229690.1 CDS BCAL0529 NC_011000.1 581102 582454 D hypothetical protein 581102..582454 Burkholderia cenocepacia J2315 6931023 YP_002229691.1 CDS BCAL0530 NC_011000.1 582451 582768 D putative export system protein 582451..582768 Burkholderia cenocepacia J2315 6931024 YP_002229692.1 CDS BCAL0531 NC_011000.1 583038 583772 D hypothetical protein 583038..583772 Burkholderia cenocepacia J2315 6931025 YP_002229693.1 CDS BCAL0532 NC_011000.1 583830 584855 R hypothetical protein complement(583830..584855) Burkholderia cenocepacia J2315 6931026 YP_002229694.1 CDS BCAL0533 NC_011000.1 585107 586513 R putative amino-acid transporter transmembrane protein complement(585107..586513) Burkholderia cenocepacia J2315 6931027 YP_002229695.1 CDS BCAL0534 NC_011000.1 586729 587385 R two-component regulatory system, response regulator protein complement(586729..587385) Burkholderia cenocepacia J2315 6931028 YP_002229696.1 CDS BCAL0535 NC_011000.1 587393 588208 R Possible gene remnant of two-component regulatory system, sensor kinase protein. Similar to the C-terminal regions of several proteins, for example, Thiobacillus denitrificans (strain ATCC 25259) possible sensor UniProt:Q3SII8 (EMBL:CP000116) (493 aa) fasta scores: E()=1.6e-15, 35.345% id in 232 aa, and to Polaromonas sp. JS666 ATP-binding region UniProt:Q4B3W6 (EMBL:AAFQ02000002) (446 aa) fasta scores: E()=8.1e-15, 34.742% id in 213 aa; sensor kinase protein complement(587393..588208) Burkholderia cenocepacia J2315 6931029 YP_002229697.1 CDS fpr NC_011000.1 588624 589394 R ferredoxin--NADP reductase complement(588624..589394) Burkholderia cenocepacia J2315 6931030 YP_002229698.1 CDS BCAL0537 NC_011000.1 589703 590518 R endonuclease/exonuclease/phosphatase family protein complement(589703..590518) Burkholderia cenocepacia J2315 6933603 YP_002229699.1 CDS BCAL0538 NC_011000.1 590524 591012 R hypothetical protein complement(590524..591012) Burkholderia cenocepacia J2315 6931031 YP_002229700.1 CDS BCAL0539 NC_011000.1 591159 591887 R putative nitroreductase/p-nitrobenzoate reductase complement(591159..591887) Burkholderia cenocepacia J2315 6931032 YP_002229701.1 CDS BCAL0540 NC_011000.1 592137 593117 D putative ATPase 592137..593117 Burkholderia cenocepacia J2315 6931033 YP_002229702.1 CDS BCAL0541 NC_011000.1 593294 594403 D putative FAD dependent oxidoreductase 593294..594403 Burkholderia cenocepacia J2315 6931034 YP_002229703.1 CDS BCAL0542 NC_011000.1 594564 594875 D putative iron-sulfur protein 594564..594875 Burkholderia cenocepacia J2315 6931035 YP_002229704.1 CDS BCAL0543 NC_011000.1 595067 596374 D major facilitator superfamily protein 595067..596374 Burkholderia cenocepacia J2315 6931036 YP_002229705.1 CDS dppA NC_011000.1 596696 598324 D putative periplasmic dipeptide transport protein 596696..598324 Burkholderia cenocepacia J2315 6931037 YP_002229706.1 CDS dppB NC_011000.1 598435 599445 D putative dipeptide transport system permease 598435..599445 Burkholderia cenocepacia J2315 6933513 YP_002229707.1 CDS dppC NC_011000.1 599450 600367 D putative dipeptide transport system permease 599450..600367 Burkholderia cenocepacia J2315 6933514 YP_002229708.1 CDS dppD NC_011000.1 600406 601368 D putative dipeptide ABC transporter ATP-binding protein 600406..601368 Burkholderia cenocepacia J2315 6933515 YP_002229709.1 CDS dppF NC_011000.1 601365 602378 D Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 601365..602378 Burkholderia cenocepacia J2315 6933516 YP_002229710.1 CDS BCAL0549 NC_011000.1 602608 603516 D hypothetical protein 602608..603516 Burkholderia cenocepacia J2315 6933517 YP_002229711.1 CDS BCAL0550 NC_011000.1 604075 604893 R LamB/YcsF family protein complement(604075..604893) Burkholderia cenocepacia J2315 6931038 YP_002229712.1 CDS BCAL0551 NC_011000.1 604896 605963 R allophanate hydrolase subunit 2 complement(604896..605963) Burkholderia cenocepacia J2315 6931039 YP_002229713.1 CDS BCAL0552 NC_011000.1 605960 606616 R allophanate hydrolase subunit 1 complement(605960..606616) Burkholderia cenocepacia J2315 6931040 YP_002229714.1 CDS BCAL0553 NC_011000.1 606763 607275 D MarR family regulatory protein 606763..607275 Burkholderia cenocepacia J2315 6931041 YP_002229715.1 CDS BCAL0554 NC_011000.1 607351 607947 R 5-formyltetrahydrofolate cyclo-ligase family protein complement(607351..607947) Burkholderia cenocepacia J2315 6931042 YP_002229716.1 CDS BCAL0555 NC_011000.1 607968 609920 D putative transglycosylase 607968..609920 Burkholderia cenocepacia J2315 6931043 YP_002229717.1 CDS BCAL0556 NC_011000.1 609971 610930 D NAD dependent epimerase/dehydratase family protein 609971..610930 Burkholderia cenocepacia J2315 6931044 YP_002229718.1 CDS BCAL0557 NC_011000.1 610993 611640 D putative glutathione S-transferase 610993..611640 Burkholderia cenocepacia J2315 6931045 YP_002229719.1 CDS cca NC_011000.1 611637 612878 D catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 611637..612878 Burkholderia cenocepacia J2315 6931046 YP_002229720.1 CDS BCAL0559 NC_011000.1 612918 613700 R putative DNA-binding protein complement(612918..613700) Burkholderia cenocepacia J2315 6933426 YP_002229721.1 CDS BCAL0560 NC_011000.1 614076 615926 D subfamily M24B peptidase 614076..615926 Burkholderia cenocepacia J2315 6931047 YP_002229722.1 CDS flgN NC_011000.1 615976 616416 R flagella synthesis protein FlgN complement(615976..616416) Burkholderia cenocepacia J2315 6931048 YP_002229723.1 CDS flgM NC_011000.1 616495 616821 R flagellin synthesis anti-sigma-28 factor complement(616495..616821) Burkholderia cenocepacia J2315 6933576 YP_002229724.1 CDS flgA NC_011000.1 616939 618150 R required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA complement(616939..618150) Burkholderia cenocepacia J2315 6933575 YP_002229725.1 CDS flgB NC_011000.1 618355 618843 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 618355..618843 Burkholderia cenocepacia J2315 6933563 YP_002229726.1 CDS flgC NC_011000.1 618882 619307 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 618882..619307 Burkholderia cenocepacia J2315 6933564 YP_002229727.1 CDS flgD NC_011000.1 619405 620109 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 619405..620109 Burkholderia cenocepacia J2315 6933565 YP_002229728.1 CDS flgE NC_011000.1 620137 621378 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 620137..621378 Burkholderia cenocepacia J2315 6933566 YP_002229729.1 CDS flgF NC_011000.1 621398 622156 D FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 621398..622156 Burkholderia cenocepacia J2315 6933567 YP_002229730.1 CDS flgG NC_011000.1 622191 622979 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 622191..622979 Burkholderia cenocepacia J2315 6933568 YP_002229731.1 CDS flgH NC_011000.1 623000 623689 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Burkholderia thailandensis has 2 copies of this and other flagella genes; flagellar basal body L-ring protein 623000..623689 Burkholderia cenocepacia J2315 6933569 YP_002229732.1 CDS flgI NC_011000.1 623683 624879 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 623683..624879 Burkholderia cenocepacia J2315 6933570 YP_002229733.1 CDS flgJ NC_011000.1 624880 625857 D Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 624880..625857 Burkholderia cenocepacia J2315 6933571 YP_002229734.1 CDS BCAL0573 NC_011000.1 625970 626787 R transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3'; putative transposase complement(join(625970..626437,626437..626787)) Burkholderia cenocepacia J2315 6933572 YP_002229735.1 CDS BCAL0575 NC_011000.1 626995 627750 D YcgR family protein 626995..627750 Burkholderia cenocepacia J2315 6931049 YP_002229736.1 CDS flgK NC_011000.1 627932 629863 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 627932..629863 Burkholderia cenocepacia J2315 6931050 YP_002229737.1 CDS flgL NC_011000.1 629881 631116 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL 629881..631116 Burkholderia cenocepacia J2315 6933573 YP_002229738.1 CDS BCAL0578 NC_011000.1 631395 632702 D putative permease 631395..632702 Burkholderia cenocepacia J2315 6933574 YP_002229739.1 CDS BCAL0579 NC_011000.1 632766 633650 R Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(632766..633650) Burkholderia cenocepacia J2315 6931051 YP_002229740.1 CDS BCAL0580 NC_011000.1 633735 634406 D putative chromate transport protein 633735..634406 Burkholderia cenocepacia J2315 6931052 YP_002229741.1 CDS BCAL0581 NC_011000.1 634403 634930 D putative chromate transporter 634403..634930 Burkholderia cenocepacia J2315 6931053 YP_002229742.1 CDS BCAL0582 NC_011000.1 634977 635315 R hypothetical protein complement(634977..635315) Burkholderia cenocepacia J2315 6931054 YP_002229743.1 CDS BCAL0583 NC_011000.1 635603 636349 D hypothetical protein 635603..636349 Burkholderia cenocepacia J2315 6931055 YP_002229744.1 CDS BCAL0584 NC_011000.1 636694 637815 D putative outer membrane porin protein 636694..637815 Burkholderia cenocepacia J2315 6931056 YP_002229745.1 CDS BCAL0585 NC_011000.1 638184 638414 D hypothetical protein 638184..638414 Burkholderia cenocepacia J2315 6931057 YP_002229746.1 CDS gor NC_011000.1 638655 640010 D glutathione reductase 638655..640010 Burkholderia cenocepacia J2315 6931058 YP_002229747.1 CDS BCAL0587 NC_011000.1 640537 641214 D putative lipoprotein 640537..641214 Burkholderia cenocepacia J2315 6933664 YP_002229748.1 CDS BCAL0588 NC_011000.1 641272 641703 D putative lipoprotein 641272..641703 Burkholderia cenocepacia J2315 6931059 YP_002229749.1 CDS BCAL0589 NC_011000.1 641714 642388 D putative lipoprotein 641714..642388 Burkholderia cenocepacia J2315 6931060 YP_002229750.1 CDS BCAL0590 NC_011000.1 642473 643309 R putative integrase complement(642473..643309) Burkholderia cenocepacia J2315 6931061 YP_002229751.1 CDS BCAL0591 NC_011000.1 643309 643836 R putative transposase complement(643309..643836) Burkholderia cenocepacia J2315 6931062 YP_002229752.1 CDS BCAL0592 NC_011000.1 643932 645233 R putative oxidoreductase complement(643932..645233) Burkholderia cenocepacia J2315 6931063 YP_002229753.1 CDS BCAL0593 NC_011000.1 645259 646563 R putative oxidoreductase complement(645259..646563) Burkholderia cenocepacia J2315 6931064 YP_002229754.1 CDS BCAL0594 NC_011000.1 646661 648250 R hypothetical protein complement(646661..648250) Burkholderia cenocepacia J2315 6931065 YP_002229755.1 CDS potI NC_011000.1 648366 649205 R putrescine transport system permease complement(648366..649205) Burkholderia cenocepacia J2315 6931066 YP_002229756.1 CDS potH NC_011000.1 649202 650155 R putrescine ABC transporter permease complement(649202..650155) Burkholderia cenocepacia J2315 6933979 YP_002229757.1 CDS potG NC_011000.1 650199 651353 R putrescine ABC transporter ATP-binding protein complement(650199..651353) Burkholderia cenocepacia J2315 6933977 YP_002229758.1 CDS potF NC_011000.1 651542 652702 R putrescine ABC transporter binding exported protein complement(651542..652702) Burkholderia cenocepacia J2315 6933975 YP_002229759.1 CDS BCAL0599 NC_011000.1 652721 654163 R putative aminotransferase complement(652721..654163) Burkholderia cenocepacia J2315 6933973 YP_002229760.1 CDS BCAL0600 NC_011000.1 654198 655535 R putative glutamine synthetase complement(654198..655535) Burkholderia cenocepacia J2315 6931067 YP_002229761.1 CDS BCAL0601 NC_011000.1 655564 656349 R family C26 cysteine peptidase; putative gamma-glutamyl-gamma-aminobutyrate hydrolase complement(655564..656349) Burkholderia cenocepacia J2315 6931068 YP_002229762.1 CDS BCAL0602 NC_011000.1 657253 657822 D MerR family regulatory protein 657253..657822 Burkholderia cenocepacia J2315 6931069 YP_002229763.1 CDS puuC NC_011000.1 657911 659401 D gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase 657911..659401 Burkholderia cenocepacia J2315 6931070 YP_002229764.1 CDS BCAL0604 NC_011000.1 659460 659660 R putative cheavy metal binding protein complement(659460..659660) Burkholderia cenocepacia J2315 6934010 YP_002229765.1 CDS BCAL0605 NC_011000.1 659991 660323 D hypothetical protein 659991..660323 Burkholderia cenocepacia J2315 6931071 YP_002229766.1 CDS BCAL0606 NC_011000.1 660336 661172 D putative transport related, membrane protein 660336..661172 Burkholderia cenocepacia J2315 6931072 YP_002229767.1 CDS BCAL0607 NC_011000.1 661298 661516 R hypothetical protein complement(661298..661516) Burkholderia cenocepacia J2315 6931073 YP_002229768.1 CDS BCAL0608 NC_011000.1 661516 661986 R hypothetical protein complement(661516..661986) Burkholderia cenocepacia J2315 6931074 YP_002229769.1 CDS BCAL0609 NC_011000.1 662057 662377 R putative DNA-binding protein complement(662057..662377) Burkholderia cenocepacia J2315 6931075 YP_002229770.1 CDS BCAL0610 NC_011000.1 662370 662735 R hypothetical protein complement(662370..662735) Burkholderia cenocepacia J2315 6931076 YP_002229771.1 CDS glmS1 NC_011000.1 662866 664683 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(662866..664683) Burkholderia cenocepacia J2315 6931077 YP_002229772.1 CDS glmU NC_011000.1 664734 666095 R bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase complement(664734..666095) Burkholderia cenocepacia J2315 6933634 YP_002229773.1 CDS BCAL0613 NC_011000.1 666231 667196 R TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase complement(666231..667196) Burkholderia cenocepacia J2315 6933636 YP_002229774.1 CDS BCAL0614 NC_011000.1 667208 667612 R hypothetical protein complement(667208..667612) Burkholderia cenocepacia J2315 6931078 YP_002229775.1 CDS BCAL0616 NC_011000.1 668301 669491 D hypothetical protein 668301..669491 Burkholderia cenocepacia J2315 6931080 YP_002229776.1 CDS BCAL0616a NC_011000.1 669505 669699 D hypothetical protein 669505..669699 Burkholderia cenocepacia J2315 6931081 YP_002229777.1 CDS BCAL0617 NC_011000.1 669754 669975 R hypothetical protein complement(669754..669975) Burkholderia cenocepacia J2315 6931082 YP_002229778.1 CDS BCAL0618 NC_011000.1 670085 670993 R PfkB family carbohydrate kinase complement(670085..670993) Burkholderia cenocepacia J2315 6931083 YP_002229779.1 CDS BCAL0619 NC_011000.1 670990 672264 R putative N-acylglucosamine 2-epimerase complement(670990..672264) Burkholderia cenocepacia J2315 6931084 YP_002229780.1 CDS BCAL0620 NC_011000.1 672267 673286 R LacI family regulatory protein complement(672267..673286) Burkholderia cenocepacia J2315 6931085 YP_002229781.1 CDS BCAL0621 NC_011000.1 673669 675513 R putative cyclic-di-GMP signaling protein complement(673669..675513) Burkholderia cenocepacia J2315 6931086 YP_002229782.1 CDS BCAL0622 NC_011000.1 675720 676751 R putative sodium bile acid symporter family protein complement(675720..676751) Burkholderia cenocepacia J2315 6931087 YP_002229783.1 CDS BCAL0623 NC_011000.1 677107 677589 D hypothetical protein 677107..677589 Burkholderia cenocepacia J2315 6931088 YP_002229784.1 CDS BCAL0624 NC_011000.1 677935 679011 D putative outer membrane porin protein 677935..679011 Burkholderia cenocepacia J2315 6931089 YP_002229785.1 CDS BCAL0625 NC_011000.1 679195 680157 D LysR family regulatory protein 679195..680157 Burkholderia cenocepacia J2315 6931090 YP_002229786.1 CDS BCAL0626 NC_011000.1 680273 681232 R putative 2-nitropropane dioxygenase complement(680273..681232) Burkholderia cenocepacia J2315 6931091 YP_002229787.1 CDS BCAL0627 NC_011000.1 681472 682368 D putative hydrolase 681472..682368 Burkholderia cenocepacia J2315 6931092 YP_002229788.1 CDS BCAL0628 NC_011000.1 682430 682921 R AsnC family regulatory protein complement(682430..682921) Burkholderia cenocepacia J2315 6931093 YP_002229789.1 CDS BCAL0629 NC_011000.1 683034 683936 D hypothetical protein 683034..683936 Burkholderia cenocepacia J2315 6931094 YP_002229790.1 CDS BCAL0629a NC_011000.1 684189 684395 R Possible alternative translational start site after codon 5; hypothetical protein complement(684189..684395) Burkholderia cenocepacia J2315 6931095 YP_002229791.1 CDS BCAL0630 NC_011000.1 684392 684898 R hypothetical protein complement(684392..684898) Burkholderia cenocepacia J2315 6931096 YP_002229792.1 CDS BCAL0631 NC_011000.1 684925 685857 R catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase complement(684925..685857) Burkholderia cenocepacia J2315 6931097 YP_002229793.1 CDS BCAL0632 NC_011000.1 685890 686831 R putative dehydrogenase complement(685890..686831) Burkholderia cenocepacia J2315 6931098 YP_002229794.1 CDS BCAL0633 NC_011000.1 687178 687801 D putative hydrolase 687178..687801 Burkholderia cenocepacia J2315 6931099 YP_002229795.1 CDS BCAL0634 NC_011000.1 688044 688328 R putative lipoprotein complement(688044..688328) Burkholderia cenocepacia J2315 6931100 YP_002229796.1 CDS yagT NC_011000.1 688966 689640 D putative xanthine dehydrogenase iron-sulfur binding subunit 688966..689640 Burkholderia cenocepacia J2315 6931101 YP_002229797.1 CDS yagS NC_011000.1 689659 690660 D putative xanthine dehydrogenase FAD binding subunit 689659..690660 Burkholderia cenocepacia J2315 6934271 YP_002229798.1 CDS xdhA NC_011000.1 690657 692882 D putative xanthine dehydrogenase molybdenum binding subunit 690657..692882 Burkholderia cenocepacia J2315 6934270 YP_002229799.1 CDS BCAL0638 NC_011000.1 692892 693812 R LysR family regulatory protein complement(692892..693812) Burkholderia cenocepacia J2315 6934264 YP_002229800.1 CDS BCAL0639 NC_011000.1 693925 694563 D putative glutathione S-transferase 693925..694563 Burkholderia cenocepacia J2315 6931102 YP_002229801.1 CDS BCAL0640 NC_011000.1 694620 695891 R major facilitator superfamily protein complement(694620..695891) Burkholderia cenocepacia J2315 6931103 YP_002229802.1 CDS BCAL0641 NC_011000.1 695989 697050 D LysR family regulatory protein 695989..697050 Burkholderia cenocepacia J2315 6931104 YP_002229803.1 CDS BCAL0641A NC_011000.1 697374 697754 D hypothetical protein 697374..697754 Burkholderia cenocepacia J2315 6931105 YP_002229804.1 CDS BCAL0644 NC_011000.1 697811 698704 R dihydrodipicolinate synthetase family protein complement(697811..698704) Burkholderia cenocepacia J2315 6931106 YP_002229805.1 CDS sbp NC_011000.1 699156 700175 D sulfate-binding protein 699156..700175 Burkholderia cenocepacia J2315 6931107 YP_002229806.1 CDS BCAL0646 NC_011000.1 700302 701309 D putative inward rectifier potassium channel protein 700302..701309 Burkholderia cenocepacia J2315 6934131 YP_002229807.1 CDS BCAL0647 NC_011000.1 701342 701956 R putative glutathione S-transferase complement(701342..701956) Burkholderia cenocepacia J2315 6931108 YP_002229808.1 CDS BCAL0650 NC_011000.1 704600 708172 D catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoacid ferredoxin oxidoreductase 704600..708172 Burkholderia cenocepacia J2315 6931110 YP_002229809.1 CDS BCAL0651 NC_011000.1 708265 710034 R sodium/hydrogen exchanger family protein complement(708265..710034) Burkholderia cenocepacia J2315 6931111 YP_002229810.1 CDS BCAL0652 NC_011000.1 710241 711527 D putative diguanylate phosphodiesterase 710241..711527 Burkholderia cenocepacia J2315 6931112 YP_002229811.1 CDS BCAL0653 NC_011000.1 711684 712070 D hypothetical protein 711684..712070 Burkholderia cenocepacia J2315 6931113 YP_002229812.1 CDS BCAL0654 NC_011000.1 712067 712471 D no significant database hits; hypothetical protein 712067..712471 Burkholderia cenocepacia J2315 6931114 YP_002229813.1 CDS BCAL0655 NC_011000.1 712581 713306 D CutC family protein 712581..713306 Burkholderia cenocepacia J2315 6931115 YP_002229814.1 CDS BCAL0656 NC_011000.1 713368 714456 D putative aminotransferase 713368..714456 Burkholderia cenocepacia J2315 6931116 YP_002229815.1 CDS BCAL0657 NC_011000.1 714481 715836 R hypothetical protein complement(714481..715836) Burkholderia cenocepacia J2315 6931117 YP_002229816.1 CDS BCAL0658 NC_011000.1 716058 717053 R allophanate hydrolase complement(716058..717053) Burkholderia cenocepacia J2315 6931118 YP_002229817.1 CDS BCAL0659 NC_011000.1 717043 717918 R allophanate hydrolase complement(717043..717918) Burkholderia cenocepacia J2315 6931119 YP_002229818.1 CDS accC NC_011000.1 717915 719372 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(717915..719372) Burkholderia cenocepacia J2315 6931120 YP_002229819.1 CDS BCAL0661 NC_011000.1 719377 719619 R hypothetical protein complement(719377..719619) Burkholderia cenocepacia J2315 6933272 YP_002229820.1 CDS BCAL0662 NC_011000.1 719642 720424 R hypothetical protein complement(719642..720424) Burkholderia cenocepacia J2315 6931121 YP_002229821.1 CDS BCAL0663 NC_011000.1 720684 721601 D LysR family regulatory protein 720684..721601 Burkholderia cenocepacia J2315 6931122 YP_002229822.1 CDS bioB NC_011000.1 721681 722700 R biotin synthase complement(721681..722700) Burkholderia cenocepacia J2315 6931123 YP_002229823.1 CDS bioD NC_011000.1 722742 723461 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(722742..723461) Burkholderia cenocepacia J2315 6933411 YP_002229824.1 CDS bioF NC_011000.1 723458 724642 R catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase complement(723458..724642) Burkholderia cenocepacia J2315 6933412 YP_002229825.1 CDS bioA NC_011000.1 724639 725985 R catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase complement(724639..725985) Burkholderia cenocepacia J2315 6933413 YP_002229826.1 CDS BCAL0668 NC_011000.1 726465 727736 R family S9 unassigned serine peptidase; family S9 serine peptidase complement(726465..727736) Burkholderia cenocepacia J2315 6933410 YP_002229827.1 CDS BCAL0669 NC_011000.1 727843 728277 R hypothetical protein complement(727843..728277) Burkholderia cenocepacia J2315 6931124 YP_002229828.1 CDS BCAL0670 NC_011000.1 728316 728993 R short chain dehydrogenase complement(728316..728993) Burkholderia cenocepacia J2315 6931125 YP_002229829.1 CDS BCAL0671 NC_011000.1 729105 729872 R putative carbonic anhydrase complement(729105..729872) Burkholderia cenocepacia J2315 6931126 YP_002229830.1 CDS aceK NC_011000.1 729929 731788 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein complement(729929..731788) Burkholderia cenocepacia J2315 6931127 YP_002229831.1 CDS BCAL0673 NC_011000.1 732051 733130 D metallo-beta-lactamase superfamily protein 732051..733130 Burkholderia cenocepacia J2315 6931128 YP_002229832.1 CDS BCAL0674 NC_011000.1 733150 734793 R ABC transporter ATP-binding protein complement(733150..734793) Burkholderia cenocepacia J2315 6931129 YP_002229833.1 CDS BCAL0675 NC_011000.1 734986 736581 R extracellular solute-binding protein complement(734986..736581) Burkholderia cenocepacia J2315 6931130 YP_002229834.1 CDS BCAL0676 NC_011000.1 736933 737706 R short chain dehydrogenase complement(736933..737706) Burkholderia cenocepacia J2315 6931131 YP_002229835.1 CDS dsbA NC_011000.1 737726 738364 R thiol:disulfide interchange protein complement(737726..738364) Burkholderia cenocepacia J2315 6931132 YP_002229836.1 CDS BCAL0678 NC_011000.1 738435 739262 R hypothetical protein complement(738435..739262) Burkholderia cenocepacia J2315 6933518 YP_002229837.1 CDS argS NC_011000.1 739433 741214 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(739433..741214) Burkholderia cenocepacia J2315 6931133 YP_002229838.1 CDS BCAL0680 NC_011000.1 741415 741738 D hypothetical protein 741415..741738 Burkholderia cenocepacia J2315 6933309 YP_002229839.1 CDS metH1 NC_011000.1 741851 744568 R putative 5-methyltetrahydrofolate--homocysteine methyltransferase complement(741851..744568) Burkholderia cenocepacia J2315 6931134 YP_002229840.1 CDS metH2 NC_011000.1 744611 745678 R putative 5-methyltetrahydrofolate--homocysteine methyltransferase complement(744611..745678) Burkholderia cenocepacia J2315 6933813 YP_002229841.1 CDS BCAL0683 NC_011000.1 745881 746138 R hypothetical protein complement(745881..746138) Burkholderia cenocepacia J2315 6933814 YP_002229842.1 CDS BCAL0684 NC_011000.1 746397 747698 R hypothetical protein complement(746397..747698) Burkholderia cenocepacia J2315 6931135 YP_002229843.1 CDS BCAL0685 NC_011000.1 747762 748628 R IclR family regulatory protein complement(747762..748628) Burkholderia cenocepacia J2315 6931136 YP_002229844.1 CDS BCAL0686 NC_011000.1 748757 749749 D fumarylacetoacetate (FAA) hydrolase family protein 748757..749749 Burkholderia cenocepacia J2315 6931137 YP_002229845.1 CDS BCAL0687 NC_011000.1 749882 750709 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 749882..750709 Burkholderia cenocepacia J2315 6931138 YP_002229846.1 CDS BCAL0688 NC_011000.1 750791 751534 D hypothetical protein 750791..751534 Burkholderia cenocepacia J2315 6931139 YP_002229847.1 CDS BCAL0689 NC_011000.1 751559 752785 D putative patatin-like phospholipase 751559..752785 Burkholderia cenocepacia J2315 6931140 YP_002229848.1 CDS BCAL0690 NC_011000.1 753251 754129 D hypothetical protein 753251..754129 Burkholderia cenocepacia J2315 6931141 YP_002229849.1 CDS BCAL0691 NC_011000.1 754291 754776 D putative cytidylyltransferase 754291..754776 Burkholderia cenocepacia J2315 6931142 YP_002229850.1 CDS BCAL0692 NC_011000.1 754793 755035 R hypothetical protein complement(754793..755035) Burkholderia cenocepacia J2315 6931143 YP_002229851.1 CDS BCAL0693 NC_011000.1 755233 756033 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(755233..756033) Burkholderia cenocepacia J2315 6931144 YP_002229852.1 CDS BCAL0694 NC_011000.1 756030 756950 R catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase complement(756030..756950) Burkholderia cenocepacia J2315 6931145 YP_002229853.1 CDS BCAL0695 NC_011000.1 757231 758076 R hypothetical protein complement(757231..758076) Burkholderia cenocepacia J2315 6931146 YP_002229854.1 CDS cpdB NC_011000.1 758085 760154 R putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase complement(758085..760154) Burkholderia cenocepacia J2315 6931147 YP_002229855.1 CDS BCAL0697 NC_011000.1 760525 761649 D hypothetical protein 760525..761649 Burkholderia cenocepacia J2315 6933457 YP_002229856.1 CDS BCAL0698 NC_011000.1 761646 762560 D ABC transporter ATP-binding protein 761646..762560 Burkholderia cenocepacia J2315 6931148 YP_002229857.1 CDS BCAL0699 NC_011000.1 762578 763507 D mce related protein 762578..763507 Burkholderia cenocepacia J2315 6931149 YP_002229858.1 CDS BCAL0700 NC_011000.1 763591 764214 D putative lipoprotein 763591..764214 Burkholderia cenocepacia J2315 6931150 YP_002229859.1 CDS BCAL0701 NC_011000.1 764234 765385 D hypothetical protein 764234..765385 Burkholderia cenocepacia J2315 6931151 YP_002229860.1 CDS BCAL0702 NC_011000.1 765540 765857 D putative ferredoxin 765540..765857 Burkholderia cenocepacia J2315 6931152 YP_002229861.1 CDS BCAL0703 NC_011000.1 765871 766515 D family S9 unassigned serine peptidase; family S9 serine peptidase 765871..766515 Burkholderia cenocepacia J2315 6931153 YP_002229862.1 CDS BCAL0704 NC_011000.1 767024 768334 D family S11 serine peptidase; D-alanyl-D-alanine carboxypeptidase 767024..768334 Burkholderia cenocepacia J2315 6931154 YP_002229863.1 CDS BCAL0705 NC_011000.1 768383 769309 D putative D-amino acid aminotransferase 768383..769309 Burkholderia cenocepacia J2315 6931155 YP_002229864.1 CDS BCAL0706 NC_011000.1 769309 769617 D hypothetical protein 769309..769617 Burkholderia cenocepacia J2315 6931156 YP_002229865.1 CDS BCAL0707 NC_011000.1 769641 770630 R Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(769641..770630) Burkholderia cenocepacia J2315 6931157 YP_002229866.1 CDS BCAL0708 NC_011000.1 770733 771059 D hypothetical protein 770733..771059 Burkholderia cenocepacia J2315 6931158 YP_002229867.1 CDS lipB NC_011000.1 771238 771900 D lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 771238..771900 Burkholderia cenocepacia J2315 6931159 YP_002229868.1 CDS lipA NC_011000.1 771893 772885 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 771893..772885 Burkholderia cenocepacia J2315 6933793 YP_002229869.1 CDS tauA NC_011000.1 773146 774162 D periplasmic component of taurine ABC transporter 773146..774162 Burkholderia cenocepacia J2315 6933792 YP_002229870.1 CDS tauB NC_011000.1 774201 774998 D taurine ABC transporter ATP-binding protein 774201..774998 Burkholderia cenocepacia J2315 6934170 YP_002229871.1 CDS tauC NC_011000.1 775070 775960 D permease of taurine ABC transporter 775070..775960 Burkholderia cenocepacia J2315 6934171 YP_002229872.1 CDS BCAL0714 NC_011000.1 776017 777891 R family T3 threonine peptidase; threonine peptidase, family T3 complement(776017..777891) Burkholderia cenocepacia J2315 6934172 YP_002229873.1 CDS BCAL0715 NC_011000.1 777975 778937 R LysR family regulatory protein complement(777975..778937) Burkholderia cenocepacia J2315 6931160 YP_002229874.1 CDS BCAL0716 NC_011000.1 779097 781220 D putative trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase 779097..781220 Burkholderia cenocepacia J2315 6931161 YP_002229875.1 CDS BCAL0717 NC_011000.1 781250 782446 D putative acyl-CoA dehydrogenase 781250..782446 Burkholderia cenocepacia J2315 6931162 YP_002229876.1 CDS BCAL0718 NC_011000.1 782461 783603 D putative acyl-CoA dehydrogenase 782461..783603 Burkholderia cenocepacia J2315 6931163 YP_002229877.1 CDS BCAL0719 NC_011000.1 783633 784838 D CAIB/BAIF family protein 783633..784838 Burkholderia cenocepacia J2315 6931164 YP_002229878.1 CDS BCAL0720 NC_011000.1 784934 785239 D hypothetical protein 784934..785239 Burkholderia cenocepacia J2315 6931165 YP_002229879.1 CDS actP NC_011000.1 785251 786936 D member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 785251..786936 Burkholderia cenocepacia J2315 6931166 YP_002229880.1 CDS dctA NC_011000.1 787317 788582 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 787317..788582 Burkholderia cenocepacia J2315 6931167 YP_002229881.1 CDS dctB NC_011000.1 788587 790596 D two-component regulatory system, sensor kinase protein 788587..790596 Burkholderia cenocepacia J2315 6933495 YP_002229882.1 CDS dctD NC_011000.1 790684 792036 D C4-dicarboxylate transport transcriptional regulatory protein 790684..792036 Burkholderia cenocepacia J2315 6933497 YP_002229883.1 CDS BCAL0725 NC_011000.1 792136 792672 R putative thiol-disulfide oxidoreductase complement(792136..792672) Burkholderia cenocepacia J2315 6933498 YP_002229884.1 CDS BCAL0726 NC_011000.1 792854 793402 D putative lipoprotein 792854..793402 Burkholderia cenocepacia J2315 6931168 YP_002229885.1 CDS BCAL0727 NC_011000.1 793735 795339 R putative magnesium chelatase subunit complement(793735..795339) Burkholderia cenocepacia J2315 6931169 YP_002229886.1 CDS BCAL0728 NC_011000.1 795604 795855 R hypothetical protein complement(795604..795855) Burkholderia cenocepacia J2315 6931170 YP_002229887.1 CDS glnB1 NC_011000.1 796211 796549 D nitrogen regulatory protein P-II 1 796211..796549 Burkholderia cenocepacia J2315 6931171 YP_002229888.1 CDS BCAL0730 NC_011000.1 796614 798098 D ammonium transporter family protein 796614..798098 Burkholderia cenocepacia J2315 6933638 YP_002229889.1 CDS gshA NC_011000.1 798342 799631 D glutamate--cysteine ligase 798342..799631 Burkholderia cenocepacia J2315 6931172 YP_002229890.1 CDS gshB NC_011000.1 799657 800613 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 799657..800613 Burkholderia cenocepacia J2315 6933673 YP_002229891.1 CDS BCAL0734 NC_011000.1 800851 801321 D sugar transport PTS system IIa component 800851..801321 Burkholderia cenocepacia J2315 6933674 YP_002229892.1 CDS ptsH NC_011000.1 801395 801664 D phosphocarrier protein HPr 801395..801664 Burkholderia cenocepacia J2315 6931173 YP_002229893.1 CDS BCAL0736 NC_011000.1 801866 803638 D putative phosphoenolpyruvate-protein phosphotransferase 801866..803638 Burkholderia cenocepacia J2315 6933997 YP_002229894.1 CDS BCAL0737 NC_011000.1 803706 804458 R putative molybdopterin biosynthesis protein complement(803706..804458) Burkholderia cenocepacia J2315 6931174 YP_002229895.1 CDS BCAL0738 NC_011000.1 804563 806116 R C-terminal processing protease-3 complement(804563..806116) Burkholderia cenocepacia J2315 6931175 YP_002229896.1 CDS gpmA NC_011000.1 806373 807119 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(806373..807119) Burkholderia cenocepacia J2315 6931176 YP_002229897.1 CDS BCAL0740 NC_011000.1 807256 807678 D hypothetical protein 807256..807678 Burkholderia cenocepacia J2315 6933665 YP_002229898.1 CDS grxC NC_011000.1 807675 807935 D glutaredoxin 3 807675..807935 Burkholderia cenocepacia J2315 6931177 YP_002229899.1 CDS secB NC_011000.1 808043 808534 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 808043..808534 Burkholderia cenocepacia J2315 6933672 YP_002229900.1 CDS gpsA NC_011000.1 808560 809558 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 808560..809558 Burkholderia cenocepacia J2315 6934138 YP_002229901.1 CDS BCAL0744 NC_011000.1 809651 810175 D Appr-1-p processing enzyme family protein 809651..810175 Burkholderia cenocepacia J2315 6933667 YP_002229902.1 CDS BCAL0745 NC_011000.1 810203 810673 R SpoU rRNA methylase family protein complement(810203..810673) Burkholderia cenocepacia J2315 6931178 YP_002229903.1 CDS BCAL0746 NC_011000.1 810776 811546 R hypothetical protein complement(810776..811546) Burkholderia cenocepacia J2315 6931179 YP_002229904.1 CDS BCAL0747 NC_011000.1 811655 812620 D putative methyltransferase 811655..812620 Burkholderia cenocepacia J2315 6931180 YP_002229905.1 CDS BCAL0748 NC_011000.1 812855 813340 D hypothetical protein 812855..813340 Burkholderia cenocepacia J2315 6931181 YP_002229906.1 CDS BCAL0749 NC_011000.1 813421 814995 D putative cytochrome c oxidase 813421..814995 Burkholderia cenocepacia J2315 6931182 YP_002229907.1 CDS ctaD NC_011000.1 815039 816646 D cytochrome c oxidase polypeptide I 815039..816646 Burkholderia cenocepacia J2315 6931183 YP_002229908.1 CDS BCAL0751 NC_011000.1 816727 816867 D hypothetical protein 816727..816867 Burkholderia cenocepacia J2315 6933461 YP_002229909.1 CDS BCAL0752 NC_011000.1 816903 817514 D involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 816903..817514 Burkholderia cenocepacia J2315 6931184 YP_002229910.1 CDS BCAL0753 NC_011000.1 817531 817731 D hypothetical protein 817531..817731 Burkholderia cenocepacia J2315 6931185 YP_002229911.1 CDS BCAL0754 NC_011000.1 817890 818747 D putative cytochrome c oxidase subunit III 817890..818747 Burkholderia cenocepacia J2315 6931186 YP_002229912.1 CDS BCAL0755 NC_011000.1 818922 819131 R hypothetical protein complement(818922..819131) Burkholderia cenocepacia J2315 6931187 YP_002229913.1 CDS BCAL0756 NC_011000.1 819216 819926 D hypothetical protein 819216..819926 Burkholderia cenocepacia J2315 6931188 YP_002229914.1 CDS BCAL0757 NC_011000.1 819987 820613 D hypothetical protein 819987..820613 Burkholderia cenocepacia J2315 6931189 YP_002229915.1 CDS BCAL0758 NC_011000.1 820639 821751 D putative cytochrome oxidase assembly protein 820639..821751 Burkholderia cenocepacia J2315 6931190 YP_002229916.1 CDS BCAL0759 NC_011000.1 821760 822662 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 821760..822662 Burkholderia cenocepacia J2315 6931191 YP_002229917.1 CDS BCAL0760 NC_011000.1 822681 823298 D putative lipoprotein 822681..823298 Burkholderia cenocepacia J2315 6931192 YP_002229918.1 CDS BCAL0761 NC_011000.1 823451 823741 R hypothetical protein complement(823451..823741) Burkholderia cenocepacia J2315 6931193 YP_002229919.1 CDS BCAL0762 NC_011000.1 823973 825610 D putative methyl-accepting chemotaxis protein 823973..825610 Burkholderia cenocepacia J2315 6931194 YP_002229920.1 CDS BCAL0763 NC_011000.1 825837 826652 D hypothetical protein 825837..826652 Burkholderia cenocepacia J2315 6931195 YP_002229921.1 CDS BCAL0764 NC_011000.1 826739 827056 R hypothetical protein complement(826739..827056) Burkholderia cenocepacia J2315 6931196 YP_002229922.1 CDS BCAL0765 NC_011000.1 827389 828354 D hypothetical protein 827389..828354 Burkholderia cenocepacia J2315 6931197 YP_002229923.1 CDS BCAL0766 NC_011000.1 828494 829390 D putative branched-chain amino acid transporter permease 828494..829390 Burkholderia cenocepacia J2315 6931198 YP_002229924.1 CDS BCAL0767 NC_011000.1 829392 830186 D ABC transporter ATP-binding protein 829392..830186 Burkholderia cenocepacia J2315 6931199 YP_002229925.1 CDS BCAL0768 NC_011000.1 830346 831053 D hypothetical protein 830346..831053 Burkholderia cenocepacia J2315 6931200 YP_002229926.1 CDS BCAL0769 NC_011000.1 830986 832482 D hypothetical protein 830986..832482 Burkholderia cenocepacia J2315 6931201 YP_002229927.1 CDS dnaE2 NC_011000.1 832492 835704 D DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 832492..835704 Burkholderia cenocepacia J2315 6931202 YP_002229928.1 CDS cpo NC_011000.1 835988 836818 R family S33 serine peptidase; non-heme chloroperoxidase complement(835988..836818) Burkholderia cenocepacia J2315 6933507 YP_002229929.1 CDS BCAL0772 NC_011000.1 837182 838189 D AraC family regulatory protein 837182..838189 Burkholderia cenocepacia J2315 6933458 YP_002229930.1 CDS BCAL0773 NC_011000.1 838315 839766 R putative short-chain fatty acids transporter complement(838315..839766) Burkholderia cenocepacia J2315 6931203 YP_002229931.1 CDS BCAL0774 NC_011000.1 839792 840727 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(839792..840727) Burkholderia cenocepacia J2315 6931204 YP_002229932.1 CDS BCAL0775 NC_011000.1 840752 844198 R putative molybdopterin oxidoreductase/DMSO reductase protein complement(840752..844198) Burkholderia cenocepacia J2315 6931205 YP_002229933.1 CDS BCAL0776 NC_011000.1 844382 845293 D LysR family regulatory protein 844382..845293 Burkholderia cenocepacia J2315 6931206 YP_002229934.1 CDS BCAL0777 NC_011000.1 845595 846329 D GntR family regulatory protein 845595..846329 Burkholderia cenocepacia J2315 6931207 YP_002229935.1 CDS BCAL0778 NC_011000.1 846416 847519 D putative N-acetylglucosamine-6-phosphate deacetylase 846416..847519 Burkholderia cenocepacia J2315 6931208 YP_002229936.1 CDS BCAL0779 NC_011000.1 847503 848543 D putative phosphosugar-binding protein 847503..848543 Burkholderia cenocepacia J2315 6931209 YP_002229937.1 CDS BCAL0780 NC_011000.1 848559 851141 D putative multiphosphoryl transfer protein 848559..851141 Burkholderia cenocepacia J2315 6931210 YP_002229938.1 CDS BCAL0781 NC_011000.1 851228 852994 D PTS system transporter subunit IIBC 851228..852994 Burkholderia cenocepacia J2315 6931211 YP_002229939.1 CDS BCAL0782 NC_011000.1 853175 855661 R putative chitobiase complement(853175..855661) Burkholderia cenocepacia J2315 6931212 YP_002229940.1 CDS BCAL0783 NC_011000.1 856232 856354 R hypothetical protein complement(856232..856354) Burkholderia cenocepacia J2315 6931213 YP_002229941.1 CDS cydB NC_011000.1 856417 857553 R cytochrome d ubiquinol oxidase subunit II complement(856417..857553) Burkholderia cenocepacia J2315 6931214 YP_002229942.1 CDS cydA NC_011000.1 857585 859165 R cytochrome d ubiquinol oxidase subunit I complement(857585..859165) Burkholderia cenocepacia J2315 6933465 YP_002229943.1 CDS BCAL0786 NC_011000.1 859155 859421 R hypothetical protein complement(859155..859421) Burkholderia cenocepacia J2315 6933464 YP_002229944.1 CDS rpoH NC_011000.1 859788 860723 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(859788..860723) Burkholderia cenocepacia J2315 6931215 YP_002229945.1 CDS BCAL0788 NC_011000.1 861084 861653 D hypothetical protein 861084..861653 Burkholderia cenocepacia J2315 6934096 YP_002229946.1 CDS BCAL0789 NC_011000.1 861699 862082 D hypothetical protein 861699..862082 Burkholderia cenocepacia J2315 6931216 YP_002229947.1 CDS BCAL0790 NC_011000.1 862226 863872 R 2-isopropylmalate synthase complement(862226..863872) Burkholderia cenocepacia J2315 6931217 YP_002229948.1 CDS BCAL0791 NC_011000.1 864241 865215 R glycosyl transferase family protein complement(864241..865215) Burkholderia cenocepacia J2315 6931218 YP_002229949.1 CDS BCAL0792 NC_011000.1 865395 866039 D putative maleylacetoacetate isomerase 865395..866039 Burkholderia cenocepacia J2315 6931219 YP_002229950.1 CDS BCAL0793 NC_011000.1 866125 867285 R putative cell division protein complement(866125..867285) Burkholderia cenocepacia J2315 6931220 YP_002229951.1 CDS BCAL0794 NC_011000.1 867502 868116 D hypothetical protein 867502..868116 Burkholderia cenocepacia J2315 6931221 YP_002229952.1 CDS coaD NC_011000.1 868228 868725 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 868228..868725 Burkholderia cenocepacia J2315 6931222 YP_002229953.1 CDS BCAL0796 NC_011000.1 868785 869051 D 4Fe-4S ferredoxin 868785..869051 Burkholderia cenocepacia J2315 6933443 YP_002229954.1 CDS BCAL0797 NC_011000.1 869129 870196 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(869129..870196) Burkholderia cenocepacia J2315 6931223 YP_002229955.1 CDS pth NC_011000.1 870313 870912 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(870313..870912) Burkholderia cenocepacia J2315 6931224 YP_002229956.1 CDS BCAL0799 NC_011000.1 871033 871650 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(871033..871650) Burkholderia cenocepacia J2315 6933996 YP_002229957.1 CDS prs NC_011000.1 871800 872735 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(871800..872735) Burkholderia cenocepacia J2315 6931225 YP_002229959.1 CDS lolB NC_011000.1 873848 874462 R Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB complement(873848..874462) Burkholderia cenocepacia J2315 6933991 YP_002229960.1 CDS BCAL0804 NC_011000.1 874468 876291 R hypothetical protein complement(874468..876291) Burkholderia cenocepacia J2315 6931226 YP_002229961.1 CDS mutM NC_011000.1 876539 877366 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 876539..877366 Burkholderia cenocepacia J2315 6931227 YP_002229962.1 CDS mutY NC_011000.1 877391 878497 D putative A/G-specific adenine glycosylase 877391..878497 Burkholderia cenocepacia J2315 6933865 YP_002229963.1 CDS BCAL0807 NC_011000.1 878615 879250 R ATP-dependent protease complement(878615..879250) Burkholderia cenocepacia J2315 6933867 YP_002229964.1 CDS BCAL0808 NC_011000.1 879277 880185 R hypothetical protein complement(879277..880185) Burkholderia cenocepacia J2315 6931228 YP_002229965.1 CDS BCAL0809 NC_011000.1 880260 881228 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(880260..881228) Burkholderia cenocepacia J2315 6931229 YP_002229966.1 CDS BCAL0812 NC_011000.1 882066 882425 R sigma-54 modulation protein complement(882066..882425) Burkholderia cenocepacia J2315 6931231 YP_002229967.1 CDS rpoN NC_011000.1 882584 884089 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(882584..884089) Burkholderia cenocepacia J2315 6931232 YP_002229968.1 CDS BCAL0814 NC_011000.1 884262 885038 R ABC transporter ATP-binding protein complement(884262..885038) Burkholderia cenocepacia J2315 6934097 YP_002229969.1 CDS BCAL0815 NC_011000.1 885035 885724 R OstA-like protein complement(885035..885724) Burkholderia cenocepacia J2315 6931233 YP_002229970.1 CDS BCAL0816 NC_011000.1 885721 886335 R hypothetical protein complement(885721..886335) Burkholderia cenocepacia J2315 6931234 YP_002229971.1 CDS kdsC NC_011000.1 886339 886875 R putative 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(886339..886875) Burkholderia cenocepacia J2315 6931235 YP_002229972.1 CDS BCAL0818 NC_011000.1 886875 887858 R putative arabinose 5-phosphate isomerase complement(886875..887858) Burkholderia cenocepacia J2315 6933774 YP_002229973.1 CDS BCAL0819 NC_011000.1 887984 889987 D sodium/hydrogen exchanger family protein 887984..889987 Burkholderia cenocepacia J2315 6931236 YP_002229974.1 CDS BCAL0820 NC_011000.1 890026 890631 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 890026..890631 Burkholderia cenocepacia J2315 6931237 YP_002229975.1 CDS BCAL0821 NC_011000.1 890707 891321 D LysE type translocator 890707..891321 Burkholderia cenocepacia J2315 6931238 YP_002229976.1 CDS BCAL0822 NC_011000.1 891327 892193 D NUDIX hydrolase 891327..892193 Burkholderia cenocepacia J2315 6931239 YP_002229977.1 CDS purU NC_011000.1 892267 893151 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 892267..893151 Burkholderia cenocepacia J2315 6931240 YP_002229978.1 CDS BCAL0824 NC_011000.1 893245 894327 R hypothetical protein complement(893245..894327) Burkholderia cenocepacia J2315 6931241 YP_002229979.1 CDS uvrA NC_011000.1 894548 897433 R excinuclease ABC subunit A complement(894548..897433) Burkholderia cenocepacia J2315 6931242 YP_002229980.1 CDS BCAL0826 NC_011000.1 897698 898885 D major facilitator superfamily protein 897698..898885 Burkholderia cenocepacia J2315 6934229 YP_002229981.1 CDS ssb NC_011000.1 898985 899542 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 898985..899542 Burkholderia cenocepacia J2315 6931243 YP_002229982.1 CDS BCAL0828 NC_011000.1 899665 900195 D putative G/U mismatch-specific DNA glycosylase 899665..900195 Burkholderia cenocepacia J2315 6934152 YP_002229983.1 CDS BCAL0829 NC_011000.1 900200 900805 D responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 900200..900805 Burkholderia cenocepacia J2315 6931244 YP_002229984.1 CDS BCAL0830 NC_011000.1 900856 901671 D putative ParA family protein 900856..901671 Burkholderia cenocepacia J2315 6931245 YP_002229985.1 CDS BCAL0831 NC_011000.1 902169 902753 D putative storage protein 902169..902753 Burkholderia cenocepacia J2315 6931246 YP_002229986.1 CDS phaA NC_011000.1 903042 904235 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 903042..904235 Burkholderia cenocepacia J2315 6931247 YP_002229987.1 CDS phbB NC_011000.1 904446 905189 D putative Acetoacetyl-CoA reductase 904446..905189 Burkholderia cenocepacia J2315 6933950 YP_002229988.1 CDS BCAL0834 NC_011000.1 905295 905501 D hypothetical protein 905295..905501 Burkholderia cenocepacia J2315 6933953 YP_002229989.1 CDS BCAL0835 NC_011000.1 905603 905932 R hypothetical protein complement(905603..905932) Burkholderia cenocepacia J2315 6931248 YP_002229990.1 CDS BCAL0836 NC_011000.1 905929 906432 R hypothetical protein complement(905929..906432) Burkholderia cenocepacia J2315 6931249 YP_002229991.1 CDS BCAL0837 NC_011000.1 906429 907247 R hypothetical protein complement(906429..907247) Burkholderia cenocepacia J2315 6931250 YP_002229992.1 CDS BCAL0838 NC_011000.1 907256 908479 R FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase I complement(907256..908479) Burkholderia cenocepacia J2315 6931251 YP_002229993.1 CDS BCAL0839 NC_011000.1 908543 909436 R putative polysaccharide deacetylase complement(908543..909436) Burkholderia cenocepacia J2315 6931252 YP_002229994.1 CDS BCAL0840 NC_011000.1 909433 911901 R MMPL family membrane protein complement(909433..911901) Burkholderia cenocepacia J2315 6931253 YP_002229995.1 CDS BCAL0841 NC_011000.1 911901 912545 R hypothetical protein complement(911901..912545) Burkholderia cenocepacia J2315 6931254 YP_002229996.1 CDS BCAL0842 NC_011000.1 912542 913525 R hypothetical protein complement(912542..913525) Burkholderia cenocepacia J2315 6931255 YP_002229997.1 CDS BCAL0843 NC_011000.1 913522 915279 R AMP-binding enzyme family protein complement(913522..915279) Burkholderia cenocepacia J2315 6931256 YP_002229998.1 CDS BCAL0844 NC_011000.1 915339 915992 R hypothetical protein complement(915339..915992) Burkholderia cenocepacia J2315 6931257 YP_002229999.1 CDS acpP NC_011000.1 916559 916822 D Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 916559..916822 Burkholderia cenocepacia J2315 6931258 YP_002230000.1 CDS BCAL0846 NC_011000.1 916892 917608 D short chain dehydrogenase 916892..917608 Burkholderia cenocepacia J2315 6933284 YP_002230001.1 CDS BCAL0847 NC_011000.1 917646 918950 D putative dioxygenase 917646..918950 Burkholderia cenocepacia J2315 6931259 YP_002230002.1 CDS BCAL0848 NC_011000.1 919076 919858 D putative glycosyltransferase 919076..919858 Burkholderia cenocepacia J2315 6931260 YP_002230003.1 CDS BCAL0849 NC_011000.1 920061 920822 D subfamily M48B metallo peptidase; subfamily M48B metalopeptidase 920061..920822 Burkholderia cenocepacia J2315 6931261 YP_002230004.1 CDS glcA NC_011000.1 920934 922634 R glycolate permease complement(920934..922634) Burkholderia cenocepacia J2315 6931262 YP_002230005.1 CDS BCAL0851 NC_011000.1 922683 924128 R putative iron-sulphur cluster containing protein complement(922683..924128) Burkholderia cenocepacia J2315 6933629 YP_002230006.1 CDS BCAL0852 NC_011000.1 924125 924850 R hypothetical protein complement(924125..924850) Burkholderia cenocepacia J2315 6931263 YP_002230007.1 CDS BCAL0853 NC_011000.1 924847 925644 R hypothetical protein complement(924847..925644) Burkholderia cenocepacia J2315 6931264 YP_002230008.1 CDS BCAL0854 NC_011000.1 925773 926489 D GntR family regulatory protein 925773..926489 Burkholderia cenocepacia J2315 6931265 YP_002230009.1 CDS BCAL0855 NC_011000.1 926692 928314 D hypothetical protein 926692..928314 Burkholderia cenocepacia J2315 6931266 YP_002230010.1 CDS BCAL0856 NC_011000.1 928558 929331 D aldolase II superfamily protein 928558..929331 Burkholderia cenocepacia J2315 6931267 YP_002230011.1 CDS BCAL0857 NC_011000.1 929362 930363 R hypothetical protein complement(929362..930363) Burkholderia cenocepacia J2315 6931268 YP_002230012.1 CDS BCAL0858 NC_011000.1 930854 931288 D hypothetical protein 930854..931288 Burkholderia cenocepacia J2315 6931269 YP_002230013.1 CDS BCAL0859 NC_011000.1 931378 932340 D putative hydrolase 931378..932340 Burkholderia cenocepacia J2315 6931270 YP_002230014.1 CDS BCAL0860 NC_011000.1 932310 933152 R putative protease complement(932310..933152) Burkholderia cenocepacia J2315 6931271 YP_002230015.1 CDS BCAL0861 NC_011000.1 933259 934854 D major facilitator superfamily protein 933259..934854 Burkholderia cenocepacia J2315 6931272 YP_002230016.1 CDS BCAL0862 NC_011000.1 934913 935359 D MarR family regulatory protein 934913..935359 Burkholderia cenocepacia J2315 6931273 YP_002230017.1 CDS BCAL0863 NC_011000.1 935427 936008 R family C56 cysteine peptidase complement(935427..936008) Burkholderia cenocepacia J2315 6931274 YP_002230018.1 CDS BCAL0864 NC_011000.1 936166 937464 R hypothetical protein complement(936166..937464) Burkholderia cenocepacia J2315 6931275 YP_002230019.1 CDS BCAL0865 NC_011000.1 937677 938504 D RpiR family regulatory protein 937677..938504 Burkholderia cenocepacia J2315 6931276 YP_002230020.1 CDS dan NC_011000.1 938507 939988 D D-aminoacylase 938507..939988 Burkholderia cenocepacia J2315 6931277 YP_002230021.1 CDS BCAL0867 NC_011000.1 940067 940453 D YjgF family protein 940067..940453 Burkholderia cenocepacia J2315 6933488 YP_002230022.1 CDS queF NC_011000.1 940536 941366 R catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(940536..941366) Burkholderia cenocepacia J2315 6931278 YP_002230023.1 CDS ilvA NC_011000.1 941379 942902 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(941379..942902) Burkholderia cenocepacia J2315 6931279 YP_002230024.1 CDS BCAL0870 NC_011000.1 943488 947513 D putative oxidoreductase 943488..947513 Burkholderia cenocepacia J2315 6933750 YP_002230025.1 CDS BCAL0871 NC_011000.1 947598 948041 D hypothetical protein 947598..948041 Burkholderia cenocepacia J2315 6931280 YP_002230026.1 CDS BCAL0872 NC_011000.1 948038 948451 D hypothetical protein 948038..948451 Burkholderia cenocepacia J2315 6931281 YP_002230027.1 CDS ubiE NC_011000.1 948504 949235 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 948504..949235 Burkholderia cenocepacia J2315 6931282 YP_002230028.1 CDS BCAL0874 NC_011000.1 949277 950308 D hypothetical protein 949277..950308 Burkholderia cenocepacia J2315 6934215 YP_002230029.1 CDS BCAL0875 NC_011000.1 950473 951099 D hypothetical protein 950473..951099 Burkholderia cenocepacia J2315 6931283 YP_002230030.1 CDS ubiB NC_011000.1 951112 952689 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 951112..952689 Burkholderia cenocepacia J2315 6931284 YP_002230031.1 CDS BCAL0877 NC_011000.1 952707 953333 D putative methyltransferase 952707..953333 Burkholderia cenocepacia J2315 6931285 YP_002230032.1 CDS BCAL0878 NC_011000.1 953429 953782 D hypothetical protein 953429..953782 Burkholderia cenocepacia J2315 6931286 YP_002230033.1 CDS BCAL0879 NC_011000.1 953847 954494 D hypothetical protein 953847..954494 Burkholderia cenocepacia J2315 6931287 YP_002230034.1 CDS aspS NC_011000.1 954561 956363 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 954561..956363 Burkholderia cenocepacia J2315 6931288 YP_002230035.1 CDS ntpA NC_011000.1 956523 957017 D converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 956523..957017 Burkholderia cenocepacia J2315 6933319 YP_002230036.1 CDS BCAL0882 NC_011000.1 957014 958288 D putative phospholipase D 957014..958288 Burkholderia cenocepacia J2315 6931289 YP_002230037.1 CDS BCAL0883 NC_011000.1 958489 959088 D TetR family regulatory protein 958489..959088 Burkholderia cenocepacia J2315 6931290 YP_002230038.1 CDS BCAL0884 NC_011000.1 959147 960934 D putative acyl-CoA dehydrogenase oxidoreductase protein 959147..960934 Burkholderia cenocepacia J2315 6931291 YP_002230039.1 CDS BCAL0885 NC_011000.1 961048 963483 D putative 3-hydroxyacyl-CoA dehydrogenase oxidoreductase 961048..963483 Burkholderia cenocepacia J2315 6931292 YP_002230040.1 CDS BCAL0886 NC_011000.1 963554 964753 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 963554..964753 Burkholderia cenocepacia J2315 6931293 YP_002230041.1 CDS BCAL0887 NC_011000.1 964845 965612 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 964845..965612 Burkholderia cenocepacia J2315 6931294 YP_002230042.1 CDS BCAL0888 NC_011000.1 965664 966500 R FdhD/NarQ family protein complement(965664..966500) Burkholderia cenocepacia J2315 6931295 YP_002230043.1 CDS BCAL0889 NC_011000.1 966621 967103 D hypothetical protein 966621..967103 Burkholderia cenocepacia J2315 6931296 YP_002230044.1 CDS BCAL0890 NC_011000.1 967140 967550 R thioesterase superfamily protein complement(967140..967550) Burkholderia cenocepacia J2315 6931297 YP_002230045.1 CDS BCAL0891 NC_011000.1 967711 969582 D ABC transporter ATP-binding membrane protein 967711..969582 Burkholderia cenocepacia J2315 6931298 YP_002230046.1 CDS BCAL0892 NC_011000.1 969788 970510 R putative nucleotidyl transferase complement(969788..970510) Burkholderia cenocepacia J2315 6931299 YP_002230047.1 CDS BCAL0893 NC_011000.1 970533 971582 R phosphotransferase enzyme family protein complement(970533..971582) Burkholderia cenocepacia J2315 6931300 YP_002230048.1 CDS BCAL0894 NC_011000.1 971807 974167 D hypothetical protein 971807..974167 Burkholderia cenocepacia J2315 6931301 YP_002230049.1 CDS BCAL0895 NC_011000.1 974249 975577 D putative peptidyl-prolyl cis-trans isomerase 974249..975577 Burkholderia cenocepacia J2315 6931302 YP_002230050.1 CDS pdxA NC_011000.1 975589 976578 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 975589..976578 Burkholderia cenocepacia J2315 6931303 YP_002230051.1 CDS ksgA NC_011000.1 976626 977453 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 976626..977453 Burkholderia cenocepacia J2315 6933936 YP_002230052.1 CDS BCAL0898 NC_011000.1 977539 978474 R hypothetical protein complement(977539..978474) Burkholderia cenocepacia J2315 6933776 YP_002230053.1 CDS gloA NC_011000.1 978859 979242 D lactoylglutathione lyase 978859..979242 Burkholderia cenocepacia J2315 6931304 YP_002230054.1 CDS BCAL0900 NC_011000.1 979351 980238 R hypothetical protein complement(979351..980238) Burkholderia cenocepacia J2315 6933644 YP_002230055.1 CDS BCAL0901 NC_011000.1 980284 981048 R putative acyltransferase complement(980284..981048) Burkholderia cenocepacia J2315 6931305 YP_002230056.1 CDS BCAL0902 NC_011000.1 981092 981655 R Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase complement(981092..981655) Burkholderia cenocepacia J2315 6931306 YP_002230057.1 CDS glyS NC_011000.1 981666 983765 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(981666..983765) Burkholderia cenocepacia J2315 6931307 YP_002230058.1 CDS glyQ NC_011000.1 983788 984792 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(983788..984792) Burkholderia cenocepacia J2315 6933661 YP_002230059.1 CDS BCAL0905 NC_011000.1 985076 986722 D hypothetical protein 985076..986722 Burkholderia cenocepacia J2315 6933660 YP_002230060.1 CDS lnt NC_011000.1 986795 988495 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(986795..988495) Burkholderia cenocepacia J2315 6931308 YP_002230061.1 CDS BCAL0907 NC_011000.1 988548 989435 R putative cation transporter efflux protein complement(988548..989435) Burkholderia cenocepacia J2315 6931309 YP_002230062.1 CDS BCAL0908 NC_011000.1 989923 990555 R ChaC-like protein complement(989923..990555) Burkholderia cenocepacia J2315 6931310 YP_002230063.1 CDS BCAL0909 NC_011000.1 990568 991344 R contains unknown N-terminal domain/putative metalloprotease C-terminal domain; unkown domain/putative metalloprotease fusion protein complement(990568..991344) Burkholderia cenocepacia J2315 6931311 YP_002230064.1 CDS BCAL0910 NC_011000.1 991496 992542 R putative PhoH-family protein complement(991496..992542) Burkholderia cenocepacia J2315 6931312 YP_002230065.1 CDS miaB NC_011000.1 992572 993945 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(992572..993945) Burkholderia cenocepacia J2315 6931313 YP_002230066.1 CDS BCAL0912 NC_011000.1 994159 995091 R LysR family regulatory protein complement(994159..995091) Burkholderia cenocepacia J2315 6933822 YP_002230067.1 CDS BCAL0913 NC_011000.1 995239 996414 D major facilitator superfamily protein 995239..996414 Burkholderia cenocepacia J2315 6931314 YP_002230068.1 CDS BCAL0914 NC_011000.1 996634 997323 D putative DNA binding protein 996634..997323 Burkholderia cenocepacia J2315 6931315 YP_002230069.1 CDS ribB NC_011000.1 997850 998488 D putative 3,4-dihydroxy-2-butanone 4-phosphate synthase 997850..998488 Burkholderia cenocepacia J2315 6933345 YP_002230070.1 CDS BCAL0916 NC_011000.1 998559 999290 R putative hydrolase protein complement(998559..999290) Burkholderia cenocepacia J2315 6934037 YP_002230071.1 CDS BCAL0917 NC_011000.1 999434 1000420 R putative oxidoreductase complement(999434..1000420) Burkholderia cenocepacia J2315 6931317 YP_002230072.1 CDS BCAL0918 NC_011000.1 1000459 1001286 R hypothetical protein complement(1000459..1001286) Burkholderia cenocepacia J2315 6931318 YP_002230073.1 CDS BCAL0919 NC_011000.1 1001327 1002352 R hypothetical protein complement(1001327..1002352) Burkholderia cenocepacia J2315 6931319 YP_002230074.1 CDS BCAL0920 NC_011000.1 1002496 1003560 R LacI family regulatory protein complement(1002496..1003560) Burkholderia cenocepacia J2315 6931320 YP_002230075.1 CDS BCAL0921 NC_011000.1 1003735 1004817 D fatty acid desaturase 1003735..1004817 Burkholderia cenocepacia J2315 6931321 YP_002230076.1 CDS BCAL0922 NC_011000.1 1004854 1005162 D 2Fe-2S ferredoxin 1004854..1005162 Burkholderia cenocepacia J2315 6931322 YP_002230077.1 CDS BCAL0923 NC_011000.1 1005167 1006417 D putative oxidoreductases 1005167..1006417 Burkholderia cenocepacia J2315 6931323 YP_002230078.1 CDS glpF NC_011000.1 1006478 1007194 R putative glycerol uptake facilitator protein complement(1006478..1007194) Burkholderia cenocepacia J2315 6931324 YP_002230079.1 CDS glpK NC_011000.1 1007276 1008787 R Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase complement(1007276..1008787) Burkholderia cenocepacia J2315 6933646 YP_002230080.1 CDS glpD NC_011000.1 1008883 1010406 R in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase complement(1008883..1010406) Burkholderia cenocepacia J2315 6933647 YP_002230081.1 CDS BCAL0927 NC_011000.1 1010569 1010937 D hypothetical protein 1010569..1010937 Burkholderia cenocepacia J2315 6933645 YP_002230082.1 CDS BCAL0928 NC_011000.1 1011032 1011229 R hypothetical protein complement(1011032..1011229) Burkholderia cenocepacia J2315 6931325 YP_002230083.1 CDS glpR NC_011000.1 1011530 1012309 R putative DeoR family glycerol-3-phosphate regulon repressor complement(1011530..1012309) Burkholderia cenocepacia J2315 6931326 YP_002230084.1 CDS BCAL0930 NC_011000.1 1012522 1014162 D family T3 threonine peptidase; putative gamma-glutamyltransferase 1012522..1014162 Burkholderia cenocepacia J2315 6933648 YP_002230085.1 CDS BCAL0931 NC_011000.1 1014490 1015317 D hypothetical protein 1014490..1015317 Burkholderia cenocepacia J2315 6931327 YP_002230086.1 CDS BCAL0932 NC_011000.1 1015388 1015894 D hypothetical protein 1015388..1015894 Burkholderia cenocepacia J2315 6931328 YP_002230087.1 CDS rhlE1 NC_011000.1 1015888 1017321 R putative ATP-dependent RNA helicase 1 complement(1015888..1017321) Burkholderia cenocepacia J2315 6931329 YP_002230088.1 CDS BCAL0934 NC_011000.1 1017459 1018757 R putative periplasmic cytochrome c containing protein complement(1017459..1018757) Burkholderia cenocepacia J2315 6934034 YP_002230089.1 CDS BCAL0935 NC_011000.1 1018777 1019541 R putative periplasmic cytochrome c protein complement(1018777..1019541) Burkholderia cenocepacia J2315 6931330 YP_002230090.1 CDS BCAL0936 NC_011000.1 1019872 1020849 D putative transmembrane transporter protein 1019872..1020849 Burkholderia cenocepacia J2315 6931331 YP_002230091.1 CDS BCAL0937 NC_011000.1 1021014 1022162 R galactonate dehydratase complement(1021014..1022162) Burkholderia cenocepacia J2315 6931332 YP_002230092.1 CDS BCAL0938a NC_011000.1 1023019 1023264 R hypothetical protein complement(1023019..1023264) Burkholderia cenocepacia J2315 6931334 YP_002230093.1 CDS BCAL0939 NC_011000.1 1023413 1023760 D hypothetical protein 1023413..1023760 Burkholderia cenocepacia J2315 6931335 YP_002230094.1 CDS BCAL0940 NC_011000.1 1023800 1026907 R putative transglycosylase complement(1023800..1026907) Burkholderia cenocepacia J2315 6931336 YP_002230095.1 CDS BCAL0941 NC_011000.1 1027154 1028041 R LysR family regulatory protein complement(1027154..1028041) Burkholderia cenocepacia J2315 6931337 YP_002230096.1 CDS BCAL0942 NC_011000.1 1028626 1028910 D hypothetical protein 1028626..1028910 Burkholderia cenocepacia J2315 6931338 YP_002230097.1 CDS BCAL0943 NC_011000.1 1028948 1029298 R hypothetical protein complement(1028948..1029298) Burkholderia cenocepacia J2315 6931339 YP_002230098.1 CDS BCAL0944 NC_011000.1 1029319 1030002 R DJ-1/PfpI family protein complement(1029319..1030002) Burkholderia cenocepacia J2315 6931340 YP_002230099.1 CDS BCAL0945 NC_011000.1 1030077 1031093 D AraC family regulatory protein 1030077..1031093 Burkholderia cenocepacia J2315 6931341 YP_002230100.1 CDS BCAL0946 NC_011000.1 1031258 1032232 D LysR family regulatory protein 1031258..1032232 Burkholderia cenocepacia J2315 6931342 YP_002230101.1 CDS BCAL0947a NC_011000.1 1033185 1033448 R Doubtful CDS; hypothetical protein complement(1033185..1033448) Burkholderia cenocepacia J2315 6931343 YP_002230102.1 CDS BCAL0948 NC_011000.1 1033718 1034815 R Possible gene remnant. Similar to the N-terminal region of Staphylococcus lentus plasmid recombination enzyme type 3 Pre UniProt:Q5DU99 (EMBL:AJ888003 (413 aa) fasta scores: E()=1.8e-05, 21.283% id in 343 aa; putative plasmid-related recombination enzyme complement(1033718..1034815) Burkholderia cenocepacia J2315 6931344 YP_002230103.1 CDS BCAL0949 NC_011000.1 1035090 1036460 R putative phage-related integrase complement(1035090..1036460) Burkholderia cenocepacia J2315 6931345 YP_002230104.1 CDS BCAL0950 NC_011000.1 1036776 1038434 R major facilitator superfamily protein complement(1036776..1038434) Burkholderia cenocepacia J2315 6933346 YP_002230105.1 CDS BCAL0951 NC_011000.1 1038662 1040209 R two-component regulatory system, sensor kinase protein complement(1038662..1040209) Burkholderia cenocepacia J2315 6931347 YP_002230106.1 CDS BCAL0952 NC_011000.1 1040227 1040955 R two-component regulatory system, response regulator protein complement(1040227..1040955) Burkholderia cenocepacia J2315 6931348 YP_002230107.1 CDS recA NC_011000.1 1041169 1042212 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1041169..1042212 Burkholderia cenocepacia J2315 6931349 YP_002230108.1 CDS recX NC_011000.1 1042212 1043075 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1042212..1043075 Burkholderia cenocepacia J2315 6931350 YP_002230109.1 CDS BCAL0955 NC_011000.1 1043231 1043821 D hypothetical protein 1043231..1043821 Burkholderia cenocepacia J2315 6931351 YP_002230110.1 CDS sucC NC_011000.1 1043890 1045056 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1043890..1045056 Burkholderia cenocepacia J2315 6931352 YP_002230111.1 CDS sucD NC_011000.1 1045121 1046002 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1045121..1046002 Burkholderia cenocepacia J2315 6934159 YP_002230112.1 CDS BCAL0958 NC_011000.1 1046160 1046864 D hypothetical protein 1046160..1046864 Burkholderia cenocepacia J2315 6934160 YP_002230113.1 CDS pilA NC_011000.1 1046962 1047558 D putative type IV pilin protein 1046962..1047558 Burkholderia cenocepacia J2315 6931353 YP_002230114.1 CDS BCAL0960 NC_011000.1 1047684 1049492 D O-antigen polymerase family protein 1047684..1049492 Burkholderia cenocepacia J2315 6933962 YP_002230115.1 CDS BCAL0961 NC_011000.1 1049944 1050294 D putative lipoprotein 1049944..1050294 Burkholderia cenocepacia J2315 6931354 YP_002230116.1 CDS moaC NC_011000.1 1050644 1051132 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(1050644..1051132) Burkholderia cenocepacia J2315 6931355 YP_002230117.1 CDS BCAL0963 NC_011000.1 1051360 1053096 D subfamily M48B metallo peptidase; subfamily M48B metalopeptidase 1051360..1053096 Burkholderia cenocepacia J2315 6933829 YP_002230118.1 CDS BCAL0964 NC_011000.1 1053136 1053723 R hypothetical protein complement(1053136..1053723) Burkholderia cenocepacia J2315 6931356 YP_002230119.1 CDS BCAL0965 NC_011000.1 1053716 1054753 R family S33 serine peptidase; putative hydrolase complement(1053716..1054753) Burkholderia cenocepacia J2315 6931357 YP_002230120.1 CDS BCAL0966 NC_011000.1 1054787 1055233 R hypothetical protein complement(1054787..1055233) Burkholderia cenocepacia J2315 6931358 YP_002230121.1 CDS waaF NC_011000.1 1055349 1056386 R putative ADP-heptose--LPS heptosyltransferase II complement(1055349..1056386) Burkholderia cenocepacia J2315 6931359 YP_002230122.1 CDS BCAL0968 NC_011000.1 1056526 1056720 R hypothetical protein complement(1056526..1056720) Burkholderia cenocepacia J2315 6934237 YP_002230123.1 CDS BCAL0969 NC_011000.1 1056864 1057769 R AraC family regulatory protein complement(1056864..1057769) Burkholderia cenocepacia J2315 6931360 YP_002230124.1 CDS BCAL0970 NC_011000.1 1057790 1058275 R CreA protein 2 complement(1057790..1058275) Burkholderia cenocepacia J2315 6931361 YP_002230125.1 CDS BCAL0971 NC_011000.1 1058730 1059053 R 4Fe-4S ferredoxin complement(1058730..1059053) Burkholderia cenocepacia J2315 6933348 YP_002230126.1 CDS pncB NC_011000.1 1059323 1060522 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1059323..1060522 Burkholderia cenocepacia J2315 6931363 YP_002230127.1 CDS BCAL0973 NC_011000.1 1060610 1061272 D hypothetical protein 1060610..1061272 Burkholderia cenocepacia J2315 6933968 YP_002230128.1 CDS BCAL0974 NC_011000.1 1061316 1062746 D hypothetical protein 1061316..1062746 Burkholderia cenocepacia J2315 6931364 YP_002230129.1 CDS BCAL0975 NC_011000.1 1062828 1063817 D putative 2-ketogluconate reductase 1062828..1063817 Burkholderia cenocepacia J2315 6931365 YP_002230130.1 CDS BCAL0976 NC_011000.1 1063820 1065289 D RmuC family protein 1063820..1065289 Burkholderia cenocepacia J2315 6931366 YP_002230131.1 CDS BCAL0977 NC_011000.1 1065380 1065865 R acetyltransferase (GNAT) family protein complement(1065380..1065865) Burkholderia cenocepacia J2315 6931367 YP_002230132.1 CDS BCAL0978 NC_011000.1 1065862 1066137 R hypothetical protein complement(1065862..1066137) Burkholderia cenocepacia J2315 6931368 YP_002230133.1 CDS moeA2 NC_011000.1 1066177 1067442 R molybdopterin biosynthesis protein MoeA 2 complement(1066177..1067442) Burkholderia cenocepacia J2315 6931369 YP_002230134.1 CDS mobA NC_011000.1 1067554 1068171 R in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(1067554..1068171) Burkholderia cenocepacia J2315 6933835 YP_002230135.1 CDS moaA NC_011000.1 1068194 1069306 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(1068194..1069306) Burkholderia cenocepacia J2315 6933832 YP_002230136.1 CDS rne2 NC_011000.1 1069437 1072601 R putative ribonuclease E complement(1069437..1072601) Burkholderia cenocepacia J2315 6933828 YP_002230137.1 CDS rluC2 NC_011000.1 1073321 1074325 D ribosomal large subunit pseudouridine synthase C 2 1073321..1074325 Burkholderia cenocepacia J2315 6934052 YP_002230138.1 CDS BCAL0984 NC_011000.1 1074331 1074990 D haloacid dehalogenase-like hydrolase 1074331..1074990 Burkholderia cenocepacia J2315 6934044 YP_002230139.1 CDS BCAL0985 NC_011000.1 1074987 1075388 D Rieske iron-sulphur protein 1074987..1075388 Burkholderia cenocepacia J2315 6931370 YP_002230140.1 CDS BCAL0986 NC_011000.1 1075401 1076393 D family S49 serine peptidase 1075401..1076393 Burkholderia cenocepacia J2315 6931371 YP_002230141.1 CDS BCAL0987 NC_011000.1 1076462 1077184 R putative tetrapyrrole methylase complement(1076462..1077184) Burkholderia cenocepacia J2315 6931372 YP_002230142.1 CDS BCAL0988 NC_011000.1 1077181 1077813 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(1077181..1077813) Burkholderia cenocepacia J2315 6931373 YP_002230143.1 CDS BCAL0989 NC_011000.1 1078044 1078679 D hypothetical protein 1078044..1078679 Burkholderia cenocepacia J2315 6931374 YP_002230144.1 CDS rpmF NC_011000.1 1078778 1078957 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1078778..1078957 Burkholderia cenocepacia J2315 6931375 YP_002230145.1 CDS plsX2 NC_011000.1 1079087 1080193 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 1079087..1080193 Burkholderia cenocepacia J2315 6934087 YP_002230146.1 CDS fabH2 NC_011000.1 1080194 1081183 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 1080194..1081183 Burkholderia cenocepacia J2315 6933967 YP_002230147.1 CDS fabD2 NC_011000.1 1081268 1082200 D malonyl CoA-acyl carrier protein transacylase 2 1081268..1082200 Burkholderia cenocepacia J2315 6933549 YP_002230148.1 CDS fabG NC_011000.1 1082237 1082986 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 1082237..1082986 Burkholderia cenocepacia J2315 6933543 YP_002230149.1 CDS acpP NC_011000.1 1083131 1083370 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1083131..1083370 Burkholderia cenocepacia J2315 6933547 YP_002230150.1 CDS fabF2 NC_011000.1 1083535 1084767 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1083535..1084767 Burkholderia cenocepacia J2315 6933286 YP_002230151.1 CDS BCAL0997 NC_011000.1 1084779 1085243 D hypothetical protein 1084779..1085243 Burkholderia cenocepacia J2315 6933545 YP_002230152.1 CDS rpoE2 NC_011000.1 1085335 1085934 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 1085335..1085934 Burkholderia cenocepacia J2315 6931376 YP_002230153.1 CDS rseA2 NC_011000.1 1086009 1086638 D sigma-E factor negative regulatory protein 2 1086009..1086638 Burkholderia cenocepacia J2315 6934095 YP_002230154.1 CDS mucB2 NC_011000.1 1086644 1087696 D sigma-E factor regulatory protein RseB 2 1086644..1087696 Burkholderia cenocepacia J2315 6934124 YP_002230155.1 CDS mucD2 NC_011000.1 1087713 1089197 D subfamily S1B serine peptidase; serine protease MucD 2 1087713..1089197 Burkholderia cenocepacia J2315 6933854 YP_002230156.1 CDS BCAL1002 NC_011000.1 1089205 1089441 D family S33 serine peptidase 1089205..1089441 Burkholderia cenocepacia J2315 6933856 YP_002230157.1 CDS lepA2 NC_011000.1 1089631 1091424 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1089631..1091424 Burkholderia cenocepacia J2315 6931377 YP_002230158.1 CDS lepB2 NC_011000.1 1091441 1092334 D subfamily S26A serine peptidase; signal peptidase I 1091441..1092334 Burkholderia cenocepacia J2315 6933781 YP_002230159.1 CDS rnc2 NC_011000.1 1092488 1093717 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1092488..1093717 Burkholderia cenocepacia J2315 6933783 YP_002230160.1 CDS era NC_011000.1 1093778 1094677 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1093778..1094677 Burkholderia cenocepacia J2315 6934050 YP_002230161.1 CDS recO NC_011000.1 1094664 1095500 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 1094664..1095500 Burkholderia cenocepacia J2315 6933537 YP_002230162.1 CDS pdxJ2 NC_011000.1 1095497 1096273 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1095497..1096273 Burkholderia cenocepacia J2315 6934028 YP_002230163.1 CDS acpS NC_011000.1 1096355 1096789 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1096355..1096789 Burkholderia cenocepacia J2315 6933939 YP_002230164.1 CDS nagZ2 NC_011000.1 1096806 1097834 D hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 1096806..1097834 Burkholderia cenocepacia J2315 6933288 YP_002230165.1 CDS BCAL1011 NC_011000.1 1098008 1099393 R sigma-54 interacting response regulator protein complement(1098008..1099393) Burkholderia cenocepacia J2315 6933872 YP_002230166.1 CDS efp2 NC_011000.1 1099661 1100218 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(1099661..1100218) Burkholderia cenocepacia J2315 6931378 YP_002230167.1 CDS BCAL1013 NC_011000.1 1100356 1101549 R hypothetical protein complement(1100356..1101549) Burkholderia cenocepacia J2315 6933530 YP_002230168.1 CDS BCAL1017 NC_011000.1 1102202 1103167 D transposase 1102202..1103167 Burkholderia cenocepacia J2315 6934232 YP_002230169.1 CDS pgsA2 NC_011000.1 1104933 1105520 D putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 1104933..1105520 Burkholderia cenocepacia J2315 6931380 YP_002230170.1 CDS BCAL1020 NC_011000.1 1106809 1108287 D putative diguanylate cyclase 1106809..1108287 Burkholderia cenocepacia J2315 6933352 YP_002230171.1 CDS BCAL1021 NC_011000.1 1108472 1109404 D Possible alternative translational start site after codon 17; putative hydrolase 1108472..1109404 Burkholderia cenocepacia J2315 6931381 YP_002230172.1 CDS BCAL1022 NC_011000.1 1109499 1110047 R acetyltransferase (GNAT) family protein complement(1109499..1110047) Burkholderia cenocepacia J2315 6931382 YP_002230173.1 CDS BCAL1023 NC_011000.1 1110098 1110718 R putative DNA-binding protein complement(1110098..1110718) Burkholderia cenocepacia J2315 6931383 YP_002230174.1 CDS BCAL1024 NC_011000.1 1110866 1111102 D hypothetical protein 1110866..1111102 Burkholderia cenocepacia J2315 6931384 YP_002230175.1 CDS BCAL1025 NC_011000.1 1111102 1111908 D subfamily M24A metallo peptidase; putative methionine aminopeptidase 1111102..1111908 Burkholderia cenocepacia J2315 6931385 YP_002230176.1 CDS BCAL1026 NC_011000.1 1112029 1112532 R hypothetical protein complement(1112029..1112532) Burkholderia cenocepacia J2315 6931386 YP_002230177.1 CDS BCAL1029 NC_011000.1 1113816 1114733 R LysR family regulatory protein complement(1113816..1114733) Burkholderia cenocepacia J2315 6931388 YP_002230178.1 CDS BCAL1030 NC_011000.1 1114845 1115711 D pirin-like protein 1114845..1115711 Burkholderia cenocepacia J2315 6931389 YP_002230179.1 CDS BCAL1031 NC_011000.1 1115853 1116344 D acetyltransferase (GNAT) family protein 1115853..1116344 Burkholderia cenocepacia J2315 6931390 YP_002230180.1 CDS BCAL1032 NC_011000.1 1116367 1117236 R hypothetical protein complement(1116367..1117236) Burkholderia cenocepacia J2315 6931391 YP_002230181.1 CDS BCAL1033 NC_011000.1 1117247 1117693 R hypothetical protein complement(1117247..1117693) Burkholderia cenocepacia J2315 6931392 YP_002230182.1 CDS BCAL1034 NC_011000.1 1117702 1118337 R SCO1/SenC family protein complement(1117702..1118337) Burkholderia cenocepacia J2315 6931393 YP_002230183.1 CDS otsB NC_011000.1 1118616 1119368 D putative trehalose-phosphatase 1118616..1119368 Burkholderia cenocepacia J2315 6931394 YP_002230184.1 CDS otsA NC_011000.1 1119365 1120750 D alpha,alpha-trehalose-phosphate synthase 1119365..1120750 Burkholderia cenocepacia J2315 6933914 YP_002230185.1 CDS BCAL1037 NC_011000.1 1120837 1121361 D putative transposase 1120837..1121361 Burkholderia cenocepacia J2315 6933912 YP_002230186.1 CDS BCAL1038 NC_011000.1 1121361 1122197 D putative transposase 1121361..1122197 Burkholderia cenocepacia J2315 6931395 YP_002230187.1 CDS BCAL1039 NC_011000.1 1122276 1124102 R ABC transporter ATP-binding membrane protein complement(1122276..1124102) Burkholderia cenocepacia J2315 6931396 YP_002230188.1 CDS BCAL1040 NC_011000.1 1124667 1125731 D glycosyl transferases group 1 protein 1124667..1125731 Burkholderia cenocepacia J2315 6931397 YP_002230189.1 CDS BCAL1041 NC_011000.1 1125967 1126770 D hypothetical protein 1125967..1126770 Burkholderia cenocepacia J2315 6931398 YP_002230190.1 CDS BCAL1042 NC_011000.1 1126810 1127274 D hypothetical protein 1126810..1127274 Burkholderia cenocepacia J2315 6931399 YP_002230191.1 CDS gudD NC_011000.1 1127396 1128748 R glucarate dehydratase complement(1127396..1128748) Burkholderia cenocepacia J2315 6931400 YP_002230192.1 CDS BCAL1044 NC_011000.1 1129107 1129856 D GntR family regulatory protein 1129107..1129856 Burkholderia cenocepacia J2315 6933692 YP_002230193.1 CDS BCAL1045 NC_011000.1 1129995 1131143 R periplasmic ligand binding lipoprotein complement(1129995..1131143) Burkholderia cenocepacia J2315 6931401 YP_002230194.1 CDS plcN NC_011000.1 1131515 1133659 R putative non-hemolytic phospholipase C complement(1131515..1133659) Burkholderia cenocepacia J2315 6931402 YP_002230195.1 CDS pdxY NC_011000.1 1133937 1134797 R pyridoxamine kinase complement(1133937..1134797) Burkholderia cenocepacia J2315 6933964 YP_002230196.1 CDS BCAL1048 NC_011000.1 1134982 1136169 D family S33 serine peptidase; putative hydrolase 1134982..1136169 Burkholderia cenocepacia J2315 6933940 YP_002230197.1 CDS BCAL1049 NC_011000.1 1136078 1137076 R luciferase-like monooxygenase complement(1136078..1137076) Burkholderia cenocepacia J2315 6931403 YP_002230198.1 CDS BCAL1050 NC_011000.1 1137709 1138890 D putative glycosyltransferase 1137709..1138890 Burkholderia cenocepacia J2315 6931404 YP_002230199.1 CDS BCAL1051 NC_011000.1 1139046 1140467 D radical SAM superfamily protein 1139046..1140467 Burkholderia cenocepacia J2315 6931405 YP_002230200.1 CDS BCAL1052 NC_011000.1 1140471 1141355 D hypothetical protein 1140471..1141355 Burkholderia cenocepacia J2315 6931406 YP_002230201.1 CDS BCAL1053 NC_011000.1 1141352 1142401 D hypothetical protein 1141352..1142401 Burkholderia cenocepacia J2315 6931407 YP_002230202.1 CDS BCAL1054 NC_011000.1 1142523 1143044 D putative lipoprotein 1142523..1143044 Burkholderia cenocepacia J2315 6931408 YP_002230203.1 CDS hisQ NC_011000.1 1143412 1144101 D histidine transport system permease 1143412..1144101 Burkholderia cenocepacia J2315 6931409 YP_002230204.1 CDS hisM NC_011000.1 1144098 1144811 D histidine transport system permease 1144098..1144811 Burkholderia cenocepacia J2315 6933722 YP_002230205.1 CDS hisP NC_011000.1 1144832 1145632 D histidine ABC transporter ATP-binding protein 1144832..1145632 Burkholderia cenocepacia J2315 6933718 YP_002230206.1 CDS BCAL1058 NC_011000.1 1145664 1146695 D AraC family regulatory protein 1145664..1146695 Burkholderia cenocepacia J2315 6933720 YP_002230207.1 CDS argD NC_011000.1 1147734 1148927 D DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 1147734..1148927 Burkholderia cenocepacia J2315 6931410 YP_002230208.1 CDS BCAL1060 NC_011000.1 1148958 1150025 D putative arginine N-succinyltransferase subunit alpha 1148958..1150025 Burkholderia cenocepacia J2315 6933308 YP_002230209.1 CDS BCAL1061 NC_011000.1 1150022 1151053 D putative arginine N-succinyltransferase subunit beta 1150022..1151053 Burkholderia cenocepacia J2315 6931411 YP_002230210.1 CDS astD NC_011000.1 1151061 1152524 D a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 1151061..1152524 Burkholderia cenocepacia J2315 6931412 YP_002230211.1 CDS astB NC_011000.1 1152539 1153879 D catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 1152539..1153879 Burkholderia cenocepacia J2315 6933321 YP_002230212.1 CDS astE NC_011000.1 1153887 1154930 D catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 1153887..1154930 Burkholderia cenocepacia J2315 6933320 YP_002230213.1 CDS BCAL1065 NC_011000.1 1155286 1156080 D periplasmic solute-binding protein 1155286..1156080 Burkholderia cenocepacia J2315 6933322 YP_002230214.1 CDS BCAL1066 NC_011000.1 1156157 1156993 R putative integrase complement(1156157..1156993) Burkholderia cenocepacia J2315 6931413 YP_002230215.1 CDS BCAL1067 NC_011000.1 1156993 1157520 R putative transposase complement(1156993..1157520) Burkholderia cenocepacia J2315 6931414 YP_002230216.1 CDS BCAL1068 NC_011000.1 1157624 1159135 R hypothetical protein complement(1157624..1159135) Burkholderia cenocepacia J2315 6931415 YP_002230217.1 CDS BCAL1069 NC_011000.1 1159161 1160903 R putative cyclic-di-GMP signaling protein complement(1159161..1160903) Burkholderia cenocepacia J2315 6931416 YP_002230218.1 CDS BCAL1070 NC_011000.1 1161182 1161730 D putative redoxin protein 1161182..1161730 Burkholderia cenocepacia J2315 6931417 YP_002230219.1 CDS BCAL1071 NC_011000.1 1161816 1162445 R NAD dependent epimerase/dehydratase family protein complement(1161816..1162445) Burkholderia cenocepacia J2315 6931418 YP_002230220.1 CDS BCAL1072 NC_011000.1 1162714 1164189 D hypothetical protein 1162714..1164189 Burkholderia cenocepacia J2315 6931419 YP_002230221.1 CDS BCAL1073 NC_011000.1 1164290 1164673 R glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein complement(1164290..1164673) Burkholderia cenocepacia J2315 6931420 YP_002230222.1 CDS iorA NC_011000.1 1164925 1165365 D isoquinoline 1-oxidoreductase subunit alpha 1164925..1165365 Burkholderia cenocepacia J2315 6931421 YP_002230223.1 CDS iorB NC_011000.1 1165349 1167553 D putative isoquinoline 1-oxidoreductase subunit beta 1165349..1167553 Burkholderia cenocepacia J2315 6933760 YP_002230224.1 CDS BCAL1076 NC_011000.1 1167642 1168730 D hypothetical protein 1167642..1168730 Burkholderia cenocepacia J2315 6933761 YP_002230225.1 CDS BCAL1077 NC_011000.1 1168762 1169724 D AraC family regulatory protein 1168762..1169724 Burkholderia cenocepacia J2315 6931422 YP_002230226.1 CDS BCAL1078 NC_011000.1 1169702 1170397 D hypothetical protein 1169702..1170397 Burkholderia cenocepacia J2315 6931423 YP_002230227.1 CDS mdtC NC_011000.1 1170559 1173867 R multidrug resistance protein MdtC complement(1170559..1173867) Burkholderia cenocepacia J2315 6931424 YP_002230228.1 CDS mdtB NC_011000.1 1173871 1176990 R multidrug resistance protein MdtB complement(1173871..1176990) Burkholderia cenocepacia J2315 6933810 YP_002230229.1 CDS mdtA NC_011000.1 1177006 1178379 R multidrug resistance protein MdtA complement(1177006..1178379) Burkholderia cenocepacia J2315 6933809 YP_002230230.1 CDS BCAL1083 NC_011000.1 1180100 1182064 R putative exported alkaline phosphatase complement(1180100..1182064) Burkholderia cenocepacia J2315 6931425 YP_002230231.1 CDS BCAL1084 NC_011000.1 1182224 1183417 R putative ammonium transporter protein complement(1182224..1183417) Burkholderia cenocepacia J2315 6931426 YP_002230232.1 CDS BCAL1085 NC_011000.1 1183671 1184006 R hypothetical protein complement(1183671..1184006) Burkholderia cenocepacia J2315 6931427 YP_002230233.1 CDS BCAL1086 NC_011000.1 1184196 1184624 D putative lipoprotein 1184196..1184624 Burkholderia cenocepacia J2315 6931428 YP_002230234.1 CDS BCAL1087 NC_011000.1 1184715 1185170 D putative transcriptional regulator 1184715..1185170 Burkholderia cenocepacia J2315 6931429 YP_002230235.1 CDS BCAL1088 NC_011000.1 1185328 1185969 D hypothetical protein 1185328..1185969 Burkholderia cenocepacia J2315 6931430 YP_002230236.1 CDS BCAL1089 NC_011000.1 1186216 1186686 D AnsC family regulatory protein 1186216..1186686 Burkholderia cenocepacia J2315 6931431 YP_002230237.1 CDS BCAL1090 NC_011000.1 1186717 1187490 R ABC transporter ATP-binding protein complement(1186717..1187490) Burkholderia cenocepacia J2315 6931432 YP_002230238.1 CDS BCAL1091 NC_011000.1 1187495 1189195 R ABC transporter membrane protein complement(1187495..1189195) Burkholderia cenocepacia J2315 6931433 YP_002230239.1 CDS BCAL1092 NC_011000.1 1189185 1190228 R ABC transporter extracellular solute-binding protein complement(1189185..1190228) Burkholderia cenocepacia J2315 6931434 YP_002230240.1 CDS BCAL1093 NC_011000.1 1190473 1190634 D hypothetical protein 1190473..1190634 Burkholderia cenocepacia J2315 6931435 YP_002230241.1 CDS BCAL1094 NC_011000.1 1190783 1192150 R putative amino acid transport system, membrane protein complement(1190783..1192150) Burkholderia cenocepacia J2315 6931436 YP_002230242.1 CDS BCAL1095 NC_011000.1 1192450 1194741 R hypothetical protein complement(1192450..1194741) Burkholderia cenocepacia J2315 6931437 YP_002230243.1 CDS BCAL1096 NC_011000.1 1194899 1198261 D putative exodeoxyribonuclease V gamma chain 1194899..1198261 Burkholderia cenocepacia J2315 6931438 YP_002230244.1 CDS BCAL1097 NC_011000.1 1198258 1201965 D putative exodeoxyribonuclease V beta chain 1198258..1201965 Burkholderia cenocepacia J2315 6931439 YP_002230245.1 CDS BCAL1098 NC_011000.1 1201962 1204271 D putative exodeoxyribonuclease V alpha chain 1201962..1204271 Burkholderia cenocepacia J2315 6931440 YP_002230246.1 CDS BCAL1099 NC_011000.1 1204268 1204672 D peptidyl-tRNA hydrolase domain-containing 1204268..1204672 Burkholderia cenocepacia J2315 6931441 YP_002230247.1 CDS BCAL1100 NC_011000.1 1204733 1206076 R putative diguanylate phosphodiesterase complement(1204733..1206076) Burkholderia cenocepacia J2315 6931442 YP_002230248.1 CDS BCAL1101 NC_011000.1 1206520 1207446 R hypothetical protein complement(1206520..1207446) Burkholderia cenocepacia J2315 6931443 YP_002230249.1 CDS BCAL1102 NC_011000.1 1207594 1207914 R putative lipoprotein complement(1207594..1207914) Burkholderia cenocepacia J2315 6931444 YP_002230250.1 CDS BCAL1103 NC_011000.1 1208065 1208277 R putative OsmB-like lipoprotein complement(1208065..1208277) Burkholderia cenocepacia J2315 6931445 YP_002230251.1 CDS thiC NC_011000.1 1208523 1210454 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(1208523..1210454) Burkholderia cenocepacia J2315 6931446 YP_002230252.1 CDS BCAL1105 NC_011000.1 1210916 1211173 D hypothetical protein 1210916..1211173 Burkholderia cenocepacia J2315 6933353 YP_002230253.1 CDS BCAL1106 NC_011000.1 1211250 1211882 D cytochrome b561 family protein 1211250..1211882 Burkholderia cenocepacia J2315 6931447 YP_002230254.1 CDS BCAL1107 NC_011000.1 1211912 1212700 D putative oxidoreductase 1211912..1212700 Burkholderia cenocepacia J2315 6931448 YP_002230255.1 CDS BCAL1108 NC_011000.1 1212735 1213016 R putative DNA-binding protein complement(1212735..1213016) Burkholderia cenocepacia J2315 6931449 YP_002230256.1 CDS BCAL1109 NC_011000.1 1213013 1213366 R phage derived protein, Gp49-like complement(1213013..1213366) Burkholderia cenocepacia J2315 6931450 YP_002230257.1 CDS BCAL1110 NC_011000.1 1213859 1215034 D hypothetical protein 1213859..1215034 Burkholderia cenocepacia J2315 6931451 YP_002230258.1 CDS BCAL1111 NC_011000.1 1215056 1216255 R major facilitator superfamily protein complement(1215056..1216255) Burkholderia cenocepacia J2315 6931452 YP_002230259.1 CDS BCAL1112 NC_011000.1 1216430 1217254 R putative phosphodiesterase complement(1216430..1217254) Burkholderia cenocepacia J2315 6931453 YP_002230260.1 CDS BCAL1113 NC_011000.1 1217339 1218370 R ABC transporter ATP-binding protein complement(1217339..1218370) Burkholderia cenocepacia J2315 6931454 YP_002230261.1 CDS BCAL1114 NC_011000.1 1218384 1219232 R putative ABC transporter membrane protein complement(1218384..1219232) Burkholderia cenocepacia J2315 6931455 YP_002230262.1 CDS BCAL1115 NC_011000.1 1219297 1220121 R putative ABC transporter membrane protein complement(1219297..1220121) Burkholderia cenocepacia J2315 6931456 YP_002230263.1 CDS BCAL1116 NC_011000.1 1220139 1221167 R extracellular solute-binding protein complement(1220139..1221167) Burkholderia cenocepacia J2315 6931457 YP_002230264.1 CDS BCAL1117 NC_011000.1 1221242 1222267 R LacI family regulatory protein complement(1221242..1222267) Burkholderia cenocepacia J2315 6931458 YP_002230265.1 CDS BCAL1118 NC_011000.1 1223099 1224301 D putative integrase 1223099..1224301 Burkholderia cenocepacia J2315 6933354 YP_002230266.1 CDS BCAL1119 NC_011000.1 1224368 1225225 D hypothetical protein 1224368..1225225 Burkholderia cenocepacia J2315 6931460 YP_002230267.1 CDS BCAL1120 NC_011000.1 1225499 1225702 D hypothetical protein 1225499..1225702 Burkholderia cenocepacia J2315 6931461 YP_002230268.1 CDS BCAL1121 NC_011000.1 1225706 1226032 D hypothetical protein 1225706..1226032 Burkholderia cenocepacia J2315 6931462 YP_002230269.1 CDS BCAL1122 NC_011000.1 1226078 1227535 D hypothetical protein 1226078..1227535 Burkholderia cenocepacia J2315 6931463 YP_002230270.1 CDS BCAL1123 NC_011000.1 1227532 1227840 D hypothetical protein 1227532..1227840 Burkholderia cenocepacia J2315 6931464 YP_002230271.1 CDS BCAL1124 NC_011000.1 1228249 1229448 D hypothetical protein 1228249..1229448 Burkholderia cenocepacia J2315 6931465 YP_002230272.1 CDS BCAL1125 NC_011000.1 1230090 1230907 R transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3'; putative transposase complement(join(1230090..1230557,1230554..1230907)) Burkholderia cenocepacia J2315 6931467 YP_002230273.1 CDS BCAL1127 NC_011000.1 1231981 1232850 R hypothetical protein complement(1231981..1232850) Burkholderia cenocepacia J2315 6931468 YP_002230274.1 CDS BCAL1128 NC_011000.1 1232843 1233166 R putative DNA-binding protein complement(1232843..1233166) Burkholderia cenocepacia J2315 6931469 YP_002230275.1 CDS BCAL1129 NC_011000.1 1233202 1233489 R hypothetical protein complement(1233202..1233489) Burkholderia cenocepacia J2315 6931470 YP_002230276.1 CDS BCAL1130 NC_011000.1 1233593 1234837 D hypothetical protein 1233593..1234837 Burkholderia cenocepacia J2315 6931471 YP_002230277.1 CDS BCAL1131 NC_011000.1 1234838 1235308 D hypothetical protein 1234838..1235308 Burkholderia cenocepacia J2315 6931472 YP_002230278.1 CDS BCAL1133 NC_011000.1 1235668 1236485 R transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3'; putative transposase complement(join(1235668..1236135,1236132..1236485)) Burkholderia cenocepacia J2315 6931474 YP_002230279.1 CDS BCAL1138 NC_011000.1 1237519 1238112 R hypothetical protein complement(1237519..1238112) Burkholderia cenocepacia J2315 6931475 YP_002230280.1 CDS BCAL1139 NC_011000.1 1238251 1239141 R putative hydrolase complement(1238251..1239141) Burkholderia cenocepacia J2315 6931476 YP_002230281.1 CDS BCAL1141 NC_011000.1 1240206 1240472 D putative transposase 1240206..1240472 Burkholderia cenocepacia J2315 6931478 YP_002230282.1 CDS BCAL1142 NC_011000.1 1240505 1241335 D transposase 1240505..1241335 Burkholderia cenocepacia J2315 6931479 YP_002230283.1 CDS BCAL1144 NC_011000.1 1242681 1243580 D C-terminus is similar to C-terminal region of Rhizobium leguminosarum bv. viciae (strain 3841). putative transmembrane protein precursor. UniProt:Q1M4U2 (EMBL:AM236086 (336 aa) fasta scores: E()=8.9e-32, 39.200% id in 250 aa; hypothetical protein 1242681..1243580 Burkholderia cenocepacia J2315 6931482 YP_002230284.1 CDS BCAL1145 NC_011000.1 1243658 1245031 D N-terminus is similar to Bradyrhizobium japonicum protein bll4390 SWALL:Q89M03 (EMBL:AP005951) (192 aa) fasta scores: E(): 0.0017, 25.92% id in 162 aa; hypothetical protein 1243658..1245031 Burkholderia cenocepacia J2315 6931483 YP_002230285.1 CDS BCAL1146 NC_011000.1 1245111 1246493 R Similar to C-terminus of Chromobacterium violaceum probable transcriptional regulator cv2654 SWALL:Q7NUP3 (EMBL:AE016919) (236 aa) fasta scores: E(): 3.7e-08, 31.48% id in 162 aa; AraC family regulatory protein complement(1245111..1246493) Burkholderia cenocepacia J2315 6931484 YP_002230286.1 CDS BCAL1147 NC_011000.1 1246928 1248049 D glycosyltransferase 1246928..1248049 Burkholderia cenocepacia J2315 6931485 YP_002230287.1 CDS BCAL1148 NC_011000.1 1248046 1248807 D putative polysaccharide deacetylase 1248046..1248807 Burkholderia cenocepacia J2315 6931486 YP_002230288.1 CDS BCAL1149 NC_011000.1 1248804 1250606 D hypothetical protein 1248804..1250606 Burkholderia cenocepacia J2315 6931487 YP_002230289.1 CDS BCAL1150 NC_011000.1 1250917 1252008 D Possible alternative translational start sites; AraC family regulatory protein 1250917..1252008 Burkholderia cenocepacia J2315 6931488 YP_002230290.1 CDS BCAL1151 NC_011000.1 1252017 1252754 R putative short-chain dehydrogenase complement(1252017..1252754) Burkholderia cenocepacia J2315 6931489 YP_002230291.1 CDS BCAL1152 NC_011000.1 1252797 1253699 R hypothetical protein complement(1252797..1253699) Burkholderia cenocepacia J2315 6931490 YP_002230292.1 CDS BCAL1153 NC_011000.1 1253723 1255252 R putative salicylaldehyde dehydrogenase complement(1253723..1255252) Burkholderia cenocepacia J2315 6931491 YP_002230293.1 CDS BCAL1154 NC_011000.1 1255534 1256628 R putative outer membrane porin complement(1255534..1256628) Burkholderia cenocepacia J2315 6931492 YP_002230294.1 CDS BCAL1155 NC_011000.1 1256839 1257591 R putative maleate cis-trans isomerase complement(1256839..1257591) Burkholderia cenocepacia J2315 6931493 YP_002230295.1 CDS BCAL1156 NC_011000.1 1257623 1258993 R putative 4-hydroxybenzoate transporter complement(1257623..1258993) Burkholderia cenocepacia J2315 6931494 YP_002230296.1 CDS BCAL1157 NC_011000.1 1259005 1260144 R Similar to the N-terminal region of Streptomyces sp. wa46 salicyl-CoA 5-hydroxylase SdgC UniProt:Q7X281 (EMBL:AB112586 (517 aa) fasta scores: E()=1.7e-41, 34.817% id in 382 aa; putative monooxygenase complement(1259005..1260144) Burkholderia cenocepacia J2315 6931495 YP_002230297.1 CDS BCAL1158 NC_011000.1 1260156 1260638 R putative thioesterase complement(1260156..1260638) Burkholderia cenocepacia J2315 6931496 YP_002230298.1 CDS BCAL1159 NC_011000.1 1260635 1262302 R putative 2,3-dihydroxybenzoate-AMP ligase complement(1260635..1262302) Burkholderia cenocepacia J2315 6931497 YP_002230299.1 CDS BCAL1160 NC_011000.1 1262324 1263205 R glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein complement(1262324..1263205) Burkholderia cenocepacia J2315 6931498 YP_002230300.1 CDS BCAL1161 NC_011000.1 1263269 1264552 R hypothetical protein complement(1263269..1264552) Burkholderia cenocepacia J2315 6931499 YP_002230301.1 CDS BCAL1162 NC_011000.1 1264682 1265407 R TetR family regulatory protein complement(1264682..1265407) Burkholderia cenocepacia J2315 6931500 YP_002230302.1 CDS BCAL1162a NC_011000.1 1267171 1267554 D putative transposase 1267171..1267554 Burkholderia cenocepacia J2315 6931501 YP_002230303.1 CDS BCAL1163 NC_011000.1 1267551 1267889 D putative transposase 1267551..1267889 Burkholderia cenocepacia J2315 6931502 YP_002230304.1 CDS BCAL1164 NC_011000.1 1267953 1269506 D putative transposase 1267953..1269506 Burkholderia cenocepacia J2315 6931503 YP_002230305.1 CDS BCAL1165 NC_011000.1 1270536 1273043 D hypothetical protein 1270536..1273043 Burkholderia cenocepacia J2315 6931504 YP_002230306.1 CDS BCAL1166 NC_011000.1 1273104 1275986 D hypothetical protein 1273104..1275986 Burkholderia cenocepacia J2315 6931505 YP_002230307.1 CDS BCAL1167 NC_011000.1 1275996 1276532 D hypothetical protein 1275996..1276532 Burkholderia cenocepacia J2315 6931506 YP_002230308.1 CDS BCAL1168 NC_011000.1 1276545 1276796 D hypothetical protein 1276545..1276796 Burkholderia cenocepacia J2315 6931507 YP_002230309.1 CDS BCAL1171 NC_011000.1 1277966 1278229 R transposase complement(1277966..1278229) Burkholderia cenocepacia J2315 6931509 YP_002230310.1 CDS BCAL1172 NC_011000.1 1278691 1280463 D hypothetical protein 1278691..1280463 Burkholderia cenocepacia J2315 6931510 YP_002230311.1 CDS BCAL1173 NC_011000.1 1280799 1282370 R putative transposase complement(1280799..1282370) Burkholderia cenocepacia J2315 6931511 YP_002230312.1 CDS BCAL1174 NC_011000.1 1282422 1282769 R putative transposase complement(1282422..1282769) Burkholderia cenocepacia J2315 6931512 YP_002230313.1 CDS BCAL1175 NC_011000.1 1282766 1283161 R putative transposase complement(1282766..1283161) Burkholderia cenocepacia J2315 6931513 YP_002230314.1 CDS BCAL1176 NC_011000.1 1283421 1284362 R putative fusaric acid resistance transport protein complement(1283421..1284362) Burkholderia cenocepacia J2315 6931514 YP_002230315.1 CDS BCAL1176a NC_011000.1 1284365 1284568 R hypothetical protein complement(1284365..1284568) Burkholderia cenocepacia J2315 6931515 YP_002230316.1 CDS BCAL1177 NC_011000.1 1284579 1286774 R Similar to C-terminus of Burkholderia cepacia fusaric acid resistance protein FusC SWALL:FUSC_BURCE (SWALL:P24128) (346 aa) fasta scores: E(): 1.5e-34, 36.54% id in 342 aa, and to entire protein of Pseudomonas syringae fusaric acid resistance protein, putative pspto1218 SWALL:Q887R8 (EMBL:AE016860) (728 aa) fasta scores: E(): 4.9e-72, 33.66% id in 695 aa; putative fusaric acid resistance transporter protein complement(1284579..1286774) Burkholderia cenocepacia J2315 6931516 YP_002230317.1 CDS BCAL1178 NC_011000.1 1286844 1288304 R putative fusaric acid resistance outer membrane efflux protein complement(1286844..1288304) Burkholderia cenocepacia J2315 6931517 YP_002230318.1 CDS BCAL1179 NC_011000.1 1288301 1289314 R LysR family regulatory protein complement(1288301..1289314) Burkholderia cenocepacia J2315 6931518 YP_002230319.1 CDS BCAL1180 NC_011000.1 1289489 1290394 R LysR family regulatory protein complement(1289489..1290394) Burkholderia cenocepacia J2315 6931519 YP_002230320.1 CDS glxK NC_011000.1 1290608 1291765 R putative glycerate kinase complement(1290608..1291765) Burkholderia cenocepacia J2315 6931520 YP_002230321.1 CDS BCAL1182 NC_011000.1 1291883 1292545 R TetR family regulatory protein complement(1291883..1292545) Burkholderia cenocepacia J2315 6933657 YP_002230322.1 CDS BCAL1183 NC_011000.1 1292889 1294247 D aldehyde dehydrogenase family protein 1292889..1294247 Burkholderia cenocepacia J2315 6931521 YP_002230323.1 CDS BCAL1185 NC_011000.1 1294755 1296593 D putative oxidoreductase 1294755..1296593 Burkholderia cenocepacia J2315 6931523 YP_002230324.1 CDS BCAL1186 NC_011000.1 1297008 1298159 D putative oxidoreductase 1297008..1298159 Burkholderia cenocepacia J2315 6931524 YP_002230325.1 CDS BCAL1187 NC_011000.1 1298163 1299326 D hypothetical protein 1298163..1299326 Burkholderia cenocepacia J2315 6931525 YP_002230326.1 CDS BCAL1188 NC_011000.1 1299326 1300171 D hypothetical protein 1299326..1300171 Burkholderia cenocepacia J2315 6931526 YP_002230327.1 CDS BCAL1189 NC_011000.1 1300375 1300725 R hypothetical protein complement(1300375..1300725) Burkholderia cenocepacia J2315 6931527 YP_002230328.1 CDS BCAL1190 NC_011000.1 1300822 1301139 R putative lipoprotein complement(1300822..1301139) Burkholderia cenocepacia J2315 6931528 YP_002230329.1 CDS BCAL1191 NC_011000.1 1301322 1303331 R putative O-antigen acetylase complement(1301322..1303331) Burkholderia cenocepacia J2315 6931529 YP_002230330.1 CDS BCAL1192 NC_011000.1 1303456 1303824 D putative DNA-binding protein 1303456..1303824 Burkholderia cenocepacia J2315 6931530 YP_002230331.1 CDS BCAL1193 NC_011000.1 1303821 1304171 R Similar to the C-terminus of Pseudomonas aeruginosa hypothetical protein cp55 SWALL:AAP22547 (EMBL:AY257538) (481 aa) fasta scores: E(): 1.7e-08, 43.18% id in 88 aa; hypothetical protein complement(1303821..1304171) Burkholderia cenocepacia J2315 6931531 YP_002230332.1 CDS BCAL1194 NC_011000.1 1304173 1304472 R hypothetical protein complement(1304173..1304472) Burkholderia cenocepacia J2315 6931532 YP_002230333.1 CDS BCAL1195 NC_011000.1 1304575 1305381 R hypothetical protein complement(1304575..1305381) Burkholderia cenocepacia J2315 6931533 YP_002230334.1 CDS BCAL1196 NC_011000.1 1305448 1306539 R no significant database hits; hypothetical protein complement(1305448..1306539) Burkholderia cenocepacia J2315 6931534 YP_002230335.1 CDS BCAL1197 NC_011000.1 1306536 1307450 R hypothetical protein complement(1306536..1307450) Burkholderia cenocepacia J2315 6931535 YP_002230336.1 CDS BCAL1198 NC_011000.1 1307501 1307716 R hypothetical protein complement(1307501..1307716) Burkholderia cenocepacia J2315 6931536 YP_002230337.1 CDS BCAL1199 NC_011000.1 1307728 1308723 R putative phage-related protein complement(1307728..1308723) Burkholderia cenocepacia J2315 6931537 YP_002230338.1 CDS BCAL1200 NC_011000.1 1308794 1308994 R hypothetical protein complement(1308794..1308994) Burkholderia cenocepacia J2315 6931538 YP_002230339.1 CDS BCAL1201 NC_011000.1 1308991 1309959 R hypothetical protein complement(1308991..1309959) Burkholderia cenocepacia J2315 6931539 YP_002230340.1 CDS BCAL1202 NC_011000.1 1310052 1310483 R hypothetical protein complement(1310052..1310483) Burkholderia cenocepacia J2315 6931540 YP_002230341.1 CDS BCAL1202A NC_011000.1 1310476 1310670 R hypothetical protein complement(1310476..1310670) Burkholderia cenocepacia J2315 6931541 YP_002230342.1 CDS BCAL1203 NC_011000.1 1310718 1311389 R C-terminus is similar to Pseudomonas putida hypothetical protein pp2497 SWALL:Q88JZ6 (EMBL:AE016783) (109 aa) fasta scores: E(): 1.2e-08, 41.58% id in 101 aa; hypothetical protein complement(1310718..1311389) Burkholderia cenocepacia J2315 6931542 YP_002230343.1 CDS BCAL1204 NC_011000.1 1311831 1314635 D putative helicase 1311831..1314635 Burkholderia cenocepacia J2315 6931543 YP_002230344.1 CDS BCAL1205 NC_011000.1 1315386 1316372 R short chain dehydrogenase complement(1315386..1316372) Burkholderia cenocepacia J2315 6931544 YP_002230345.1 CDS BCAL1207 NC_011000.1 1316527 1317531 R dehydrogenase complement(1316527..1317531) Burkholderia cenocepacia J2315 6931545 YP_002230346.1 CDS BCAL1208 NC_011000.1 1317635 1318063 R hypothetical protein complement(1317635..1318063) Burkholderia cenocepacia J2315 6931546 YP_002230347.1 CDS morB NC_011000.1 1318121 1319242 R putative morphinone reductase; flavin oxidoreductase/NADH oxidase family protein complement(1318121..1319242) Burkholderia cenocepacia J2315 6931547 YP_002230348.1 CDS BCAL1210 NC_011000.1 1319399 1320298 D LysR family regulatory protein 1319399..1320298 Burkholderia cenocepacia J2315 6933839 YP_002230349.1 CDS BCAL1211 NC_011000.1 1320448 1321074 D hypothetical protein 1320448..1321074 Burkholderia cenocepacia J2315 6931548 YP_002230350.1 CDS bkdA1 NC_011000.1 1321481 1322713 D 2-oxoisovalerate dehydrogenase subunit alpha 1321481..1322713 Burkholderia cenocepacia J2315 6931549 YP_002230351.1 CDS bkdA2 NC_011000.1 1322752 1323756 D 2-oxoisovalerate dehydrogenase subunit beta 1322752..1323756 Burkholderia cenocepacia J2315 6933414 YP_002230352.1 CDS bkdB NC_011000.1 1323758 1325071 D branched-chain alpha-keto acid dehydrogenase subunit E2 1323758..1325071 Burkholderia cenocepacia J2315 6933415 YP_002230353.1 CDS lpdV NC_011000.1 1325076 1326467 D E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1325076..1326467 Burkholderia cenocepacia J2315 6933416 YP_002230354.1 CDS BCAL1216 NC_011000.1 1326784 1327413 D hypothetical protein 1326784..1327413 Burkholderia cenocepacia J2315 6933796 YP_002230355.1 CDS BCAL1217 NC_011000.1 1327441 1328358 R LysR family regulatory protein complement(1327441..1328358) Burkholderia cenocepacia J2315 6931550 YP_002230356.1 CDS speB NC_011000.1 1328487 1329455 D catalyzes the formation of putrescine from agmatine; agmatinase 1328487..1329455 Burkholderia cenocepacia J2315 6931551 YP_002230357.1 CDS BCAL1219 NC_011000.1 1329448 1329912 D putative acetyltransferase 1329448..1329912 Burkholderia cenocepacia J2315 6934149 YP_002230358.1 CDS BCAL1220 NC_011000.1 1330415 1331845 D putative transport-related membrane protein 1330415..1331845 Burkholderia cenocepacia J2315 6931552 YP_002230359.1 CDS BCAL1221 NC_011000.1 1331993 1333072 D putative porin 1331993..1333072 Burkholderia cenocepacia J2315 6931553 YP_002230360.1 CDS BCAL1222 NC_011000.1 1333131 1334087 R LysR family regulatory protein complement(1333131..1334087) Burkholderia cenocepacia J2315 6931554 YP_002230361.1 CDS BCAL1223 NC_011000.1 1334278 1335588 D major facilitator superfamily protein 1334278..1335588 Burkholderia cenocepacia J2315 6931555 YP_002230362.1 CDS BCAL1224 NC_011000.1 1335614 1336891 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1335614..1336891 Burkholderia cenocepacia J2315 6931556 YP_002230363.1 CDS BCAL1225 NC_011000.1 1336915 1337937 D putative aminohydrolase 1336915..1337937 Burkholderia cenocepacia J2315 6931557 YP_002230364.1 CDS BCAL1226 NC_011000.1 1338044 1339249 R major facilitator superfamily protein complement(1338044..1339249) Burkholderia cenocepacia J2315 6931558 YP_002230365.1 CDS BCAL1227 NC_011000.1 1340003 1340914 R LysR family regulatory protein complement(1340003..1340914) Burkholderia cenocepacia J2315 6931559 YP_002230366.1 CDS BCAL1228 NC_011000.1 1341075 1341995 D putative L-serine dehydratase 1341075..1341995 Burkholderia cenocepacia J2315 6931560 YP_002230367.1 CDS BCAL1229 NC_011000.1 1342245 1343435 R putative lipoprotein complement(1342245..1343435) Burkholderia cenocepacia J2315 6931561 YP_002230368.1 CDS BCAL1230 NC_011000.1 1343553 1344407 R LysR family regulatory protein complement(1343553..1344407) Burkholderia cenocepacia J2315 6931562 YP_002230369.1 CDS BCAL1231 NC_011000.1 1344556 1345311 D hypothetical protein 1344556..1345311 Burkholderia cenocepacia J2315 6931563 YP_002230370.1 CDS BCAL1232 NC_011000.1 1345402 1345704 D hypothetical protein 1345402..1345704 Burkholderia cenocepacia J2315 6931564 YP_002230371.1 CDS BCAL1233 NC_011000.1 1345815 1346225 R putative heat shock Hsp20-related protein complement(1345815..1346225) Burkholderia cenocepacia J2315 6931565 YP_002230372.1 CDS BCAL1234 NC_011000.1 1346242 1346679 R putative heat shock protein complement(1346242..1346679) Burkholderia cenocepacia J2315 6931566 YP_002230373.1 CDS BCAL1235 NC_011000.1 1346926 1347843 D putative 3-hydroxyacyl-CoA dehydrogenase 1346926..1347843 Burkholderia cenocepacia J2315 6931567 YP_002230374.1 CDS BCAL1236 NC_011000.1 1347857 1348138 R hypothetical protein complement(1347857..1348138) Burkholderia cenocepacia J2315 6931568 YP_002230375.1 CDS BCAL1237 NC_011000.1 1348300 1349148 R LysR family regulatory protein complement(1348300..1349148) Burkholderia cenocepacia J2315 6931569 YP_002230376.1 CDS BCAL1238 NC_011000.1 1349477 1349872 D putative malonate transport-related system membrane protein 1349477..1349872 Burkholderia cenocepacia J2315 6931570 YP_002230377.1 CDS BCAL1239 NC_011000.1 1349893 1350651 D putative malonate transport-related system membrane protein 1349893..1350651 Burkholderia cenocepacia J2315 6931571 YP_002230378.1 CDS BCAL1240 NC_011000.1 1350785 1352431 D putative malonate decarboxylase alpha-subunit 1350785..1352431 Burkholderia cenocepacia J2315 6931572 YP_002230379.1 CDS BCAL1241 NC_011000.1 1352442 1352756 D acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta 1352442..1352756 Burkholderia cenocepacia J2315 6931573 YP_002230380.1 CDS BCAL1242 NC_011000.1 1352753 1353688 D The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 1352753..1353688 Burkholderia cenocepacia J2315 6931574 YP_002230381.1 CDS BCAL1243 NC_011000.1 1353675 1354382 D putative malonate decarboxylase gamma-subunit 1353675..1354382 Burkholderia cenocepacia J2315 6931575 YP_002230382.1 CDS BCAL1244 NC_011000.1 1354369 1355037 D catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 1354369..1355037 Burkholderia cenocepacia J2315 6931576 YP_002230383.1 CDS BCAL1245 NC_011000.1 1355034 1355900 D putative coenzyme-A synthase 1355034..1355900 Burkholderia cenocepacia J2315 6931577 YP_002230384.1 CDS BCAL1246 NC_011000.1 1355897 1356829 D putative malonyl CoA-acyl carrier protein transacylase 1355897..1356829 Burkholderia cenocepacia J2315 6931578 YP_002230385.1 CDS BCAL1247 NC_011000.1 1356958 1357467 D hypothetical protein 1356958..1357467 Burkholderia cenocepacia J2315 6931579 YP_002230386.1 CDS BCAL1248 NC_011000.1 1357593 1358240 D putative phosphoribosyl transferase protein 1357593..1358240 Burkholderia cenocepacia J2315 6931580 YP_002230387.1 CDS BCAL1249 NC_011000.1 1358248 1359465 R putative PHB depolymerase complement(1358248..1359465) Burkholderia cenocepacia J2315 6931581 YP_002230388.1 CDS BCAL1250 NC_011000.1 1359638 1360267 D putative glutathione S-transferase 1359638..1360267 Burkholderia cenocepacia J2315 6931582 YP_002230389.1 CDS BCAL1251 NC_011000.1 1360452 1360646 D hypothetical protein 1360452..1360646 Burkholderia cenocepacia J2315 6931583 YP_002230390.1 CDS BCAL1252 NC_011000.1 1360757 1362247 R putative proline/betaine transporter complement(1360757..1362247) Burkholderia cenocepacia J2315 6931584 YP_002230391.1 CDS BCAL1253 NC_011000.1 1362722 1363120 D hypothetical protein 1362722..1363120 Burkholderia cenocepacia J2315 6931585 YP_002230392.1 CDS dnaQ NC_011000.1 1363148 1363882 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(1363148..1363882) Burkholderia cenocepacia J2315 6931586 YP_002230393.1 CDS rnhA NC_011000.1 1363923 1364366 R ribonuclease HI complement(1363923..1364366) Burkholderia cenocepacia J2315 6933511 YP_002230394.1 CDS BCAL1256 NC_011000.1 1364363 1365175 R putative methyltransferase complement(1364363..1365175) Burkholderia cenocepacia J2315 6934053 YP_002230395.1 CDS BCAL1257 NC_011000.1 1365335 1366015 D putative gultathione hydrolase 1365335..1366015 Burkholderia cenocepacia J2315 6931587 YP_002230396.1 CDS BCAL1258 NC_011000.1 1366167 1367753 D putative exported transglycosylase protein 1366167..1367753 Burkholderia cenocepacia J2315 6931588 YP_002230397.1 CDS BCAL1259 NC_011000.1 1367849 1369126 D major facilitator superfamily protein 1367849..1369126 Burkholderia cenocepacia J2315 6931589 YP_002230398.1 CDS carA NC_011000.1 1369492 1370637 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1369492..1370637 Burkholderia cenocepacia J2315 6931590 YP_002230399.1 CDS BCAL1261 NC_011000.1 1370674 1371333 D leucine export protein LeuE 1370674..1371333 Burkholderia cenocepacia J2315 6933423 YP_002230400.1 CDS carB NC_011000.1 1371383 1374637 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1371383..1374637 Burkholderia cenocepacia J2315 6931591 YP_002230401.1 CDS greA NC_011000.1 1374756 1375232 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1374756..1375232 Burkholderia cenocepacia J2315 6933424 YP_002230402.1 CDS BCAL1264 NC_011000.1 1375247 1375705 D hypothetical protein 1375247..1375705 Burkholderia cenocepacia J2315 6933668 YP_002230403.1 CDS BCAL1265 NC_011000.1 1375774 1376301 R hypothetical protein complement(1375774..1376301) Burkholderia cenocepacia J2315 6931592 YP_002230404.1 CDS BCAL1266 NC_011000.1 1376495 1377157 D putative ribosomal RNA large subunit methyltransferase 1376495..1377157 Burkholderia cenocepacia J2315 6931593 YP_002230405.1 CDS ftsH NC_011000.1 1377324 1379222 D family M41 metallo peptidase; FtsH endopeptidase 1377324..1379222 Burkholderia cenocepacia J2315 6931594 YP_002230406.1 CDS folP NC_011000.1 1379314 1380192 D dihydropteroate synthase 1379314..1380192 Burkholderia cenocepacia J2315 6933607 YP_002230407.1 CDS glmM NC_011000.1 1380220 1381575 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1380220..1381575 Burkholderia cenocepacia J2315 6933602 YP_002230408.1 CDS pstS NC_011000.1 1382015 1383049 D phosphate transport system substrate-binding exported periplasmic protein 1382015..1383049 Burkholderia cenocepacia J2315 6931595 YP_002230409.1 CDS pstC NC_011000.1 1383144 1384130 D part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 1383144..1384130 Burkholderia cenocepacia J2315 6933995 YP_002230410.1 CDS pstA NC_011000.1 1384169 1385020 D Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 1384169..1385020 Burkholderia cenocepacia J2315 6933994 YP_002230411.1 CDS pstB NC_011000.1 1385036 1385884 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1385036..1385884 Burkholderia cenocepacia J2315 6933992 YP_002230412.1 CDS BCAL1274 NC_011000.1 1385903 1386607 D phosphate transport system-related protein 1385903..1386607 Burkholderia cenocepacia J2315 6933993 YP_002230413.1 CDS phoB NC_011000.1 1386639 1387340 D phosphate regulon two-component regulatory system response regulator protein 1386639..1387340 Burkholderia cenocepacia J2315 6931596 YP_002230414.1 CDS BCAL1276 NC_011000.1 1387398 1388717 D putative phosphate regulon two-component regulatory system sensor kinase protein 1387398..1388717 Burkholderia cenocepacia J2315 6933961 YP_002230415.1 CDS ppk NC_011000.1 1388805 1390997 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(1388805..1390997) Burkholderia cenocepacia J2315 6931597 YP_002230416.1 CDS BCAL1278 NC_011000.1 1391148 1392662 D putative exopolyphosphatase 1391148..1392662 Burkholderia cenocepacia J2315 6933983 YP_002230417.1 CDS BCAL1279 NC_011000.1 1392769 1393209 R hypothetical protein complement(1392769..1393209) Burkholderia cenocepacia J2315 6931598 YP_002230418.1 CDS BCAL1280 NC_011000.1 1393670 1394131 D putative hydrolase 1393670..1394131 Burkholderia cenocepacia J2315 6933355 YP_002230419.1 CDS BCAL1281 NC_011000.1 1394303 1395109 D hypothetical protein 1394303..1395109 Burkholderia cenocepacia J2315 6931600 YP_002230420.1 CDS BCAL1282 NC_011000.1 1395317 1395487 R hypothetical protein complement(1395317..1395487) Burkholderia cenocepacia J2315 6931601 YP_002230421.1 CDS BCAL1285 NC_011000.1 1395825 1397204 R MATE family transporter protein complement(1395825..1397204) Burkholderia cenocepacia J2315 6931602 YP_002230422.1 CDS BCAL1286 NC_011000.1 1397215 1397538 R hypothetical protein complement(1397215..1397538) Burkholderia cenocepacia J2315 6931603 YP_002230423.1 CDS BCAL1287 NC_011000.1 1397611 1399230 R putative acetyl-CoA synthetase complement(1397611..1399230) Burkholderia cenocepacia J2315 6931604 YP_002230424.1 CDS BCAL1288 NC_011000.1 1399599 1400291 R family M23 peptidase complement(1399599..1400291) Burkholderia cenocepacia J2315 6931605 YP_002230425.1 CDS BCAL1289 NC_011000.1 1400424 1401335 R aldose 1-epimerase complement(1400424..1401335) Burkholderia cenocepacia J2315 6931606 YP_002230426.1 CDS BCAL1290 NC_011000.1 1401815 1402645 D phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1401815..1402645 Burkholderia cenocepacia J2315 6931607 YP_002230427.1 CDS BCAL1291 NC_011000.1 1403502 1403879 D hypothetical protein 1403502..1403879 Burkholderia cenocepacia J2315 6933356 YP_002230428.1 CDS BCAL1292 NC_011000.1 1403904 1404476 D hypothetical protein 1403904..1404476 Burkholderia cenocepacia J2315 6931609 YP_002230429.1 CDS BCAL1293 NC_011000.1 1404478 1406355 R hypothetical protein complement(1404478..1406355) Burkholderia cenocepacia J2315 6931610 YP_002230430.1 CDS BCAL1294 NC_011000.1 1406501 1408606 D hypothetical protein 1406501..1408606 Burkholderia cenocepacia J2315 6931611 YP_002230431.1 CDS BCAL1295 NC_011000.1 1408618 1409910 D hypothetical protein 1408618..1409910 Burkholderia cenocepacia J2315 6931612 YP_002230432.1 CDS BCAL1296 NC_011000.1 1409910 1411085 D C-terminus is similar to the C-terminus of Serratia marcescens phospholipase phlA SWALL:Q8RKT9 (EMBL:AY091641) (320 aa) fasta scores: E(): 1.5e-08, 32.2% id in 236 aa, and to Xanthomonas campestris phospholipase A1 SWALL:Q8P3M3 (EMBL:AE012526) (729 aa) fasta scores: E(): 2.6e-09, 36.79% id in 212 aa; hypothetical protein 1409910..1411085 Burkholderia cenocepacia J2315 6931613 YP_002230433.1 CDS BCAL1297 NC_011000.1 1411196 1411993 D hypothetical protein 1411196..1411993 Burkholderia cenocepacia J2315 6931614 YP_002230434.1 CDS BCAL1298 NC_011000.1 1412009 1413058 D hypothetical protein 1412009..1413058 Burkholderia cenocepacia J2315 6931615 YP_002230435.1 CDS BCAL1299 NC_011000.1 1413060 1413506 D hypothetical protein 1413060..1413506 Burkholderia cenocepacia J2315 6931616 YP_002230436.1 CDS BCAL1300 NC_011000.1 1413509 1413943 D hypothetical protein 1413509..1413943 Burkholderia cenocepacia J2315 6931617 YP_002230437.1 CDS BCAL1301 NC_011000.1 1414675 1416678 D hypothetical protein 1414675..1416678 Burkholderia cenocepacia J2315 6931618 YP_002230439.1 CDS BCAL1305 NC_011000.1 1418662 1420284 D hypothetical protein 1418662..1420284 Burkholderia cenocepacia J2315 6931620 YP_002230440.1 CDS BCAL1306 NC_011000.1 1420374 1421147 R putative IstB-like ATP binding protein complement(1420374..1421147) Burkholderia cenocepacia J2315 6931621 YP_002230441.1 CDS BCAL1307 NC_011000.1 1421144 1422172 R putative integrase complement(1421144..1422172) Burkholderia cenocepacia J2315 6931622 YP_002230444.1 CDS BCAL1313 NC_011000.1 1426511 1426774 R transposase complement(1426511..1426774) Burkholderia cenocepacia J2315 6931624 YP_002230445.1 CDS BCAL1315 NC_011000.1 1428615 1433486 D hypothetical protein 1428615..1433486 Burkholderia cenocepacia J2315 6931625 YP_002230446.1 CDS BCAL1316 NC_011000.1 1433479 1435032 D hypothetical protein 1433479..1435032 Burkholderia cenocepacia J2315 6931626 YP_002230447.1 CDS BCAL1317 NC_011000.1 1435511 1436902 R putative phage integrase complement(1435511..1436902) Burkholderia cenocepacia J2315 6931627 YP_002230448.1 CDS BCAL1318 NC_011000.1 1437976 1439331 D putative nitrate regulatory protein 1437976..1439331 Burkholderia cenocepacia J2315 6931628 YP_002230449.1 CDS BCAL1319 NC_011000.1 1439665 1440507 D putative formate/nitrate transporter 1439665..1440507 Burkholderia cenocepacia J2315 6931629 YP_002230450.1 CDS BCAL1320 NC_011000.1 1441107 1441667 D hypothetical protein 1441107..1441667 Burkholderia cenocepacia J2315 6931630 YP_002230451.1 CDS glmS3 NC_011000.1 1441964 1443781 R family C44 cysteine peptidase; glucosamine--fructose-6-phosphate aminotransferase complement(1441964..1443781) Burkholderia cenocepacia J2315 6931631 YP_002230452.1 CDS BCAL1322 NC_011000.1 1443831 1444919 R hypothetical protein complement(1443831..1444919) Burkholderia cenocepacia J2315 6933635 YP_002230453.1 CDS BCAL1323 NC_011000.1 1445012 1447168 R putative outer membrane protein complement(1445012..1447168) Burkholderia cenocepacia J2315 6931632 YP_002230454.1 CDS BCAL1324 NC_011000.1 1447484 1448254 R hypothetical protein complement(1447484..1448254) Burkholderia cenocepacia J2315 6931633 YP_002230455.1 CDS BCAL1325 NC_011000.1 1448268 1449281 R hypothetical protein complement(1448268..1449281) Burkholderia cenocepacia J2315 6931634 YP_002230456.1 CDS BCAL1326 NC_011000.1 1449292 1450287 R hypothetical protein complement(1449292..1450287) Burkholderia cenocepacia J2315 6931635 YP_002230457.1 CDS BCAL1327 NC_011000.1 1450291 1451853 R putative glycosyltransferase complement(1450291..1451853) Burkholderia cenocepacia J2315 6931636 YP_002230458.1 CDS wecB NC_011000.1 1453032 1454249 D UDP-N-acetylglucosamine 2-epimerase 1453032..1454249 Burkholderia cenocepacia J2315 6931637 YP_002230459.1 CDS BCAL1329 NC_011000.1 1454576 1455559 D Possible alternative upstream translational start sites; putative dehydrogenase 1454576..1455559 Burkholderia cenocepacia J2315 6934258 YP_002230460.1 CDS BCAL1330 NC_011000.1 1455911 1456372 D 2Fe-2S ferredoxin 1455911..1456372 Burkholderia cenocepacia J2315 6931638 YP_002230461.1 CDS BCAL1331 NC_011000.1 1456369 1458693 D putative aldehyde dehydrogenase 1456369..1458693 Burkholderia cenocepacia J2315 6931639 YP_002230462.1 CDS BCAL1332 NC_011000.1 1458767 1459534 D aldolase II superfamily protein 1458767..1459534 Burkholderia cenocepacia J2315 6931640 YP_002230463.1 CDS BCAL1333 NC_011000.1 1459644 1461473 D putative Acyl-CoA dehydrogenase 1459644..1461473 Burkholderia cenocepacia J2315 6931641 YP_002230464.1 CDS BCAL1334 NC_011000.1 1461613 1462593 D putative dehydrogenase 1461613..1462593 Burkholderia cenocepacia J2315 6931642 YP_002230465.1 CDS BCAL1335 NC_011000.1 1462753 1463376 R PadR family regulatory protein complement(1462753..1463376) Burkholderia cenocepacia J2315 6931643 YP_002230466.1 CDS fadH NC_011000.1 1463507 1465510 D putative 2,4-dienoyl-CoA reductase 1463507..1465510 Burkholderia cenocepacia J2315 6931644 YP_002230467.1 CDS BCAL1337 NC_011000.1 1465558 1465998 D hypothetical protein 1465558..1465998 Burkholderia cenocepacia J2315 6933552 YP_002230468.1 CDS BCAL1338 NC_011000.1 1466024 1467091 R hypothetical protein complement(1466024..1467091) Burkholderia cenocepacia J2315 6931645 YP_002230469.1 CDS mhpA NC_011000.1 1467105 1468763 R catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; 3-(3-hydroxyphenyl)propionate hydroxylase complement(1467105..1468763) Burkholderia cenocepacia J2315 6931646 YP_002230470.1 CDS tftE NC_011000.1 1468815 1469882 R putative maleylacetate reductase complement(1468815..1469882) Burkholderia cenocepacia J2315 6931647 YP_002230471.1 CDS BCAL1341 NC_011000.1 1469890 1470192 R hypothetical protein complement(1469890..1470192) Burkholderia cenocepacia J2315 6934177 YP_002230472.1 CDS BCAL1342 NC_011000.1 1470189 1471070 R putative hydroxyquinol 1,2-dioxygenase complement(1470189..1471070) Burkholderia cenocepacia J2315 6931648 YP_002230473.1 CDS BCAL1343 NC_011000.1 1471190 1472113 D LysR family regulatory protein 1471190..1472113 Burkholderia cenocepacia J2315 6931649 YP_002230474.1 CDS BCAL1344 NC_011000.1 1472197 1473183 D hypothetical protein 1472197..1473183 Burkholderia cenocepacia J2315 6931650 YP_002230475.1 CDS BCAL1345 NC_011000.1 1473322 1475532 D putative TonB-dependent siderophore receptor 1473322..1475532 Burkholderia cenocepacia J2315 6931651 YP_002230476.1 CDS BCAL1346 NC_011000.1 1475544 1476329 D putative Fe uptake system ATP-binding protein 1475544..1476329 Burkholderia cenocepacia J2315 6931652 YP_002230477.1 CDS BCAL1347 NC_011000.1 1476335 1477315 D putative Fe uptake system extracellular binding protein 1476335..1477315 Burkholderia cenocepacia J2315 6931653 YP_002230478.1 CDS BCAL1348 NC_011000.1 1477312 1478352 D FecCD-family membrane transporter protein 1477312..1478352 Burkholderia cenocepacia J2315 6931654 YP_002230479.1 CDS BCAL1349 NC_011000.1 1478399 1479790 R two-component regulatory system, sensor kinase protein complement(1478399..1479790) Burkholderia cenocepacia J2315 6931655 YP_002230480.1 CDS BCAL1350 NC_011000.1 1479791 1480516 R two-component regulatory system, response regulator protein complement(1479791..1480516) Burkholderia cenocepacia J2315 6931656 YP_002230481.1 CDS BCAL1351 NC_011000.1 1480759 1481505 D hypothetical protein 1480759..1481505 Burkholderia cenocepacia J2315 6931657 YP_002230482.1 CDS BCAL1352 NC_011000.1 1481779 1482114 D hypothetical protein 1481779..1482114 Burkholderia cenocepacia J2315 6931658 YP_002230483.1 CDS BCAL1353 NC_011000.1 1482337 1483734 R hypothetical protein complement(1482337..1483734) Burkholderia cenocepacia J2315 6931659 YP_002230484.1 CDS BCAL1354 NC_011000.1 1483771 1484034 R hypothetical protein complement(1483771..1484034) Burkholderia cenocepacia J2315 6931660 YP_002230485.1 CDS BCAL1355 NC_011000.1 1484514 1487309 D hypothetical protein 1484514..1487309 Burkholderia cenocepacia J2315 6931661 YP_002230486.1 CDS BCAL1356 NC_011000.1 1487312 1488166 D hypothetical protein 1487312..1488166 Burkholderia cenocepacia J2315 6931662 YP_002230487.1 CDS BCAL1357 NC_011000.1 1488251 1488859 D hypothetical protein 1488251..1488859 Burkholderia cenocepacia J2315 6931663 YP_002230488.1 CDS BCAL1358 NC_011000.1 1488856 1491255 D hypothetical protein 1488856..1491255 Burkholderia cenocepacia J2315 6931664 YP_002230489.1 CDS BCAL1359 NC_011000.1 1491317 1495018 D hypothetical protein 1491317..1495018 Burkholderia cenocepacia J2315 6931665 YP_002230490.1 CDS BCAL1360 NC_011000.1 1495129 1495941 D hypothetical protein 1495129..1495941 Burkholderia cenocepacia J2315 6931666 YP_002230491.1 CDS BCAL1362 NC_011000.1 1496284 1499088 D hypothetical protein 1496284..1499088 Burkholderia cenocepacia J2315 6931667 YP_002230492.1 CDS BCAL1363 NC_011000.1 1499094 1499984 D Possible gene remnant. Similar to the N-terminal regions of several proteins, for example, similar to CIP 106301) hypothetical protein UniProt:Q2T2T3 (EMBL:CP000085) (169 aa) fasta scores: E()=0.00037, 32.298% id in 161 aa; hypothetical protein 1499094..1499984 Burkholderia cenocepacia J2315 6931668 YP_002230493.1 CDS BCAL1364 NC_011000.1 1499981 1500355 D Possible gene remnant. Similar to the C-terminal regions of several proteins, for example, similar to Rhizobium loti (Mesorhizobium loti) MLR4844 protein UniProt:Q98D60 (EMBL:BA000012) (120 aa) fasta scores: E()=2.6e-05, 31.395% id in 86 aa; hypothetical protein 1499981..1500355 Burkholderia cenocepacia J2315 6931669 YP_002230494.1 CDS BCAL1365 NC_011000.1 1500364 1500843 D putative lipoprotein 1500364..1500843 Burkholderia cenocepacia J2315 6931670 YP_002230495.1 CDS BCAL1366 NC_011000.1 1500849 1502972 D hypothetical protein 1500849..1502972 Burkholderia cenocepacia J2315 6931671 YP_002230496.1 CDS BCAL1367 NC_011000.1 1503038 1504267 R putative invasion protein complement(1503038..1504267) Burkholderia cenocepacia J2315 6931672 YP_002230497.1 CDS BCAL1368 NC_011000.1 1504681 1505841 R putative porin complement(1504681..1505841) Burkholderia cenocepacia J2315 6931673 YP_002230498.1 CDS fecI NC_011000.1 1506330 1506839 D putative RNA polymerase sigma factor FecI 1506330..1506839 Burkholderia cenocepacia J2315 6931674 YP_002230499.1 CDS fecR NC_011000.1 1506843 1507826 D iron uptake regulatory protein FecR 1506843..1507826 Burkholderia cenocepacia J2315 6933559 YP_002230500.1 CDS BCAL1371 NC_011000.1 1507929 1510448 D putative TonB-dependent siderophore receptor 1507929..1510448 Burkholderia cenocepacia J2315 6933560 YP_002230501.1 CDS BCAL1372 NC_011000.1 1510485 1511234 D Possible alternative translational start site after codon 4; hypothetical protein 1510485..1511234 Burkholderia cenocepacia J2315 6931675 YP_002230502.1 CDS BCAL1373 NC_011000.1 1511250 1512140 R LysR family regulatory protein complement(1511250..1512140) Burkholderia cenocepacia J2315 6931676 YP_002230503.1 CDS BCAL1374 NC_011000.1 1512253 1512678 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1512253..1512678 Burkholderia cenocepacia J2315 6931677 YP_002230504.1 CDS BCAL1375 NC_011000.1 1512811 1513395 D flavin reductase family protein 1512811..1513395 Burkholderia cenocepacia J2315 6931678 YP_002230505.1 CDS BCAL1376 NC_011000.1 1513435 1514331 R LysR family regulatory protein complement(1513435..1514331) Burkholderia cenocepacia J2315 6931679 YP_002230506.1 CDS BCAL1377 NC_011000.1 1514429 1515727 D citrate transporter 1514429..1515727 Burkholderia cenocepacia J2315 6931680 YP_002230507.1 CDS BCAL1378 NC_011000.1 1515767 1517125 D hypothetical protein 1515767..1517125 Burkholderia cenocepacia J2315 6931681 YP_002230508.1 CDS BCAL1379 NC_011000.1 1517125 1517436 D hypothetical protein 1517125..1517436 Burkholderia cenocepacia J2315 6931682 YP_002230509.1 CDS ramA NC_011000.1 1517481 1518302 R (R)-stereoselective amidase complement(1517481..1518302) Burkholderia cenocepacia J2315 6931683 YP_002230510.1 CDS BCAL1381 NC_011000.1 1518690 1519487 R LuxR superfamily regulatory protein complement(1518690..1519487) Burkholderia cenocepacia J2315 6934025 YP_002230511.1 CDS BCAL1382 NC_011000.1 1519763 1520587 D hypothetical protein 1519763..1520587 Burkholderia cenocepacia J2315 6931684 YP_002230512.1 CDS BCAL1383 NC_011000.1 1520628 1521557 R cytidylyltransferase family protein complement(1520628..1521557) Burkholderia cenocepacia J2315 6931685 YP_002230513.1 CDS BCAL1384 NC_011000.1 1521595 1522227 R Similar to the C-terminal region of Homo sapiens (Human) AGPAT1 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha UniProt:Q99943 (EMBL:AL662828) (283 aa) fasta scores: E()=3.4e-06, 30.500% id in 200 aa; putative acyltransferase complement(1521595..1522227) Burkholderia cenocepacia J2315 6931686 YP_002230514.1 CDS BCAL1385 NC_011000.1 1522695 1523300 D putative CDP-alcohol phosphatidyltransferase 1522695..1523300 Burkholderia cenocepacia J2315 6931687 YP_002230515.1 CDS BCAL1386 NC_011000.1 1523379 1525148 D family S33 serine peptidase; putative hydrolase 1523379..1525148 Burkholderia cenocepacia J2315 6931688 YP_002230516.1 CDS BCAL1387 NC_011000.1 1525145 1526548 D putative phosphatase 1525145..1526548 Burkholderia cenocepacia J2315 6931689 YP_002230517.1 CDS BCAL1388 NC_011000.1 1526548 1527000 D hypothetical protein 1526548..1527000 Burkholderia cenocepacia J2315 6931690 YP_002230518.1 CDS bcsB NC_011000.1 1527849 1530182 D binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 1527849..1530182 Burkholderia cenocepacia J2315 6931691 YP_002230519.1 CDS bcsZ NC_011000.1 1530264 1531415 D catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase 1530264..1531415 Burkholderia cenocepacia J2315 6933407 YP_002230520.1 CDS BCAL1391 NC_011000.1 1531568 1535305 D putative cellulose biosynthesis protein 1531568..1535305 Burkholderia cenocepacia J2315 6933408 YP_002230521.1 CDS BCAL1392 NC_011000.1 1535322 1537301 D hypothetical protein 1535322..1537301 Burkholderia cenocepacia J2315 6931692 YP_002230522.1 CDS BCAL1393 NC_011000.1 1537298 1537531 D hypothetical protein 1537298..1537531 Burkholderia cenocepacia J2315 6931693 YP_002230523.1 CDS BCAL1394 NC_011000.1 1537528 1538307 D hypothetical protein 1537528..1538307 Burkholderia cenocepacia J2315 6931694 YP_002230524.1 CDS bcsA NC_011000.1 1538304 1540841 D putative cellulose synthase catalytic subunit 1538304..1540841 Burkholderia cenocepacia J2315 6931695 YP_002230525.1 CDS BCAL1396 NC_011000.1 1540869 1542425 D hypothetical protein 1540869..1542425 Burkholderia cenocepacia J2315 6933406 YP_002230526.1 CDS BCAL1397 NC_011000.1 1542407 1542604 D hypothetical protein 1542407..1542604 Burkholderia cenocepacia J2315 6931696 YP_002230527.1 CDS BCAL1398 NC_011000.1 1542660 1543544 R pirin-like protein complement(1542660..1543544) Burkholderia cenocepacia J2315 6931697 YP_002230528.1 CDS BCAL1399 NC_011000.1 1543577 1543969 R OsmC-like protein complement(1543577..1543969) Burkholderia cenocepacia J2315 6931698 YP_002230529.1 CDS BCAL1400 NC_011000.1 1544014 1545594 R sodium/hydrogen exchanger family protein complement(1544014..1545594) Burkholderia cenocepacia J2315 6931699 YP_002230530.1 CDS BCAL1401 NC_011000.1 1545620 1545880 R hypothetical protein complement(1545620..1545880) Burkholderia cenocepacia J2315 6931700 YP_002230531.1 CDS BCAL1402 NC_011000.1 1546156 1546842 D isochorismatase family protein 1546156..1546842 Burkholderia cenocepacia J2315 6931701 YP_002230532.1 CDS BCAL1403 NC_011000.1 1546906 1547829 R LysR family regulatory protein complement(1546906..1547829) Burkholderia cenocepacia J2315 6931702 YP_002230533.1 CDS BCAL1403A NC_011000.1 1547928 1548095 D hypothetical protein 1547928..1548095 Burkholderia cenocepacia J2315 6931703 YP_002230534.1 CDS BCAL1404 NC_011000.1 1548114 1550003 D amidohydrolase family protein 1548114..1550003 Burkholderia cenocepacia J2315 6931704 YP_002230535.1 CDS BCAL1405 NC_011000.1 1550005 1550466 D hypothetical protein 1550005..1550466 Burkholderia cenocepacia J2315 6931705 YP_002230536.1 CDS BCAL1406 NC_011000.1 1550493 1551407 D hypothetical protein 1550493..1551407 Burkholderia cenocepacia J2315 6931706 YP_002230537.1 CDS BCAL1407 NC_011000.1 1551404 1552105 D hypothetical protein 1551404..1552105 Burkholderia cenocepacia J2315 6931707 YP_002230538.1 CDS BCAL1408 NC_011000.1 1552102 1553607 D hypothetical protein 1552102..1553607 Burkholderia cenocepacia J2315 6931708 YP_002230539.1 CDS BCAL1409 NC_011000.1 1553717 1555303 R phosphoesterase family protein complement(1553717..1555303) Burkholderia cenocepacia J2315 6931709 YP_002230540.1 CDS BCAL1410 NC_011000.1 1555499 1556875 D Di-heme cytochrome c peroxidase 1555499..1556875 Burkholderia cenocepacia J2315 6931710 YP_002230541.1 CDS BCAL1411 NC_011000.1 1556985 1557371 D hypothetical protein 1556985..1557371 Burkholderia cenocepacia J2315 6931711 YP_002230542.1 CDS BCAL1412 NC_011000.1 1557380 1557853 D NUDIX hydrolase 1557380..1557853 Burkholderia cenocepacia J2315 6931712 YP_002230543.1 CDS glnS NC_011000.1 1557988 1559697 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(1557988..1559697) Burkholderia cenocepacia J2315 6931713 YP_002230544.1 CDS BCAL1413A NC_011000.1 1559951 1560160 D putative lipoprotein 1559951..1560160 Burkholderia cenocepacia J2315 6933643 YP_002230545.1 CDS BCAL1414 NC_011000.1 1560352 1560900 D putative hydrolase 1560352..1560900 Burkholderia cenocepacia J2315 6931714 YP_002230546.1 CDS BCAL1415 NC_011000.1 1560934 1562154 R putative lipid metabolism-related protein complement(1560934..1562154) Burkholderia cenocepacia J2315 6931715 YP_002230547.1 CDS alaS NC_011000.1 1562398 1565022 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1562398..1565022 Burkholderia cenocepacia J2315 6931716 YP_002230548.1 CDS BCAL1417 NC_011000.1 1565163 1566077 R LysR family regulatory protein complement(1565163..1566077) Burkholderia cenocepacia J2315 6933293 YP_002230549.1 CDS BCAL1418 NC_011000.1 1566203 1567474 D major facilitator superfamily protein 1566203..1567474 Burkholderia cenocepacia J2315 6931717 YP_002230550.1 CDS BCAL1419 NC_011000.1 1567587 1568123 D putative phosphatase 1567587..1568123 Burkholderia cenocepacia J2315 6931718 YP_002230551.1 CDS BCAL1420 NC_011000.1 1568209 1568724 D putative thioesterase 1568209..1568724 Burkholderia cenocepacia J2315 6931719 YP_002230552.1 CDS BCAL1421 NC_011000.1 1568734 1569669 D putative branched amino acid transport system, membrane protein 1568734..1569669 Burkholderia cenocepacia J2315 6931720 YP_002230553.1 CDS BCAL1422 NC_011000.1 1569662 1570891 D branched-chain amino acid transport system family protein 1569662..1570891 Burkholderia cenocepacia J2315 6931721 YP_002230554.1 CDS BCAL1423 NC_011000.1 1570888 1571640 D ABC transporter ATP-binding protein 1570888..1571640 Burkholderia cenocepacia J2315 6931722 YP_002230555.1 CDS BCAL1424 NC_011000.1 1571637 1572341 D putative branched amino ABC transporter ATP-binding protein 1571637..1572341 Burkholderia cenocepacia J2315 6931723 YP_002230556.1 CDS BCAL1425 NC_011000.1 1572535 1573281 D putative glucose 1-dehydrogenase 1572535..1573281 Burkholderia cenocepacia J2315 6931724 YP_002230557.1 CDS BCAL1426 NC_011000.1 1573328 1573822 R hypothetical protein complement(1573328..1573822) Burkholderia cenocepacia J2315 6931725 YP_002230558.1 CDS BCAL1427 NC_011000.1 1573945 1574763 R myo-inositol catabolism protein complement(1573945..1574763) Burkholderia cenocepacia J2315 6931726 YP_002230559.1 CDS BCAL1428 NC_011000.1 1574820 1575749 R putative amine catabolism-related protein complement(1574820..1575749) Burkholderia cenocepacia J2315 6931727 YP_002230560.1 CDS BCAL1429 NC_011000.1 1575809 1577692 R putative TPP-binding acetolactate synthase complement(1575809..1577692) Burkholderia cenocepacia J2315 6931728 YP_002230561.1 CDS BCAL1430 NC_011000.1 1577739 1579694 R putative carbohydrate kinase complement(1577739..1579694) Burkholderia cenocepacia J2315 6931729 YP_002230562.1 CDS BCAL1431 NC_011000.1 1580012 1580938 D putative ribose ABC transporter substrate-binding exported protein 1580012..1580938 Burkholderia cenocepacia J2315 6931730 YP_002230563.1 CDS BCAL1432 NC_011000.1 1581005 1582588 D putative sugar ABC transporter ATP-binding protein 1581005..1582588 Burkholderia cenocepacia J2315 6931731 YP_002230564.1 CDS BCAL1433 NC_011000.1 1582616 1583641 D putative sugar transport system permease 1582616..1583641 Burkholderia cenocepacia J2315 6931732 YP_002230565.1 CDS BCAL1434 NC_011000.1 1583685 1584596 D putative myo-inositol catabolism protein 1583685..1584596 Burkholderia cenocepacia J2315 6931733 YP_002230566.1 CDS idh NC_011000.1 1584671 1585684 D inositol 2-dehydrogenase 1584671..1585684 Burkholderia cenocepacia J2315 6931734 YP_002230567.1 CDS BCAL1436 NC_011000.1 1585724 1586650 D putative dehydratase 1585724..1586650 Burkholderia cenocepacia J2315 6933744 YP_002230568.1 CDS BCAL1437 NC_011000.1 1586683 1587855 D putative oxidoreductase 1586683..1587855 Burkholderia cenocepacia J2315 6931735 YP_002230569.1 CDS BCAL1438 NC_011000.1 1588075 1589034 D putative transcriptional regulatory protein 1588075..1589034 Burkholderia cenocepacia J2315 6931736 YP_002230570.1 CDS msdA NC_011000.1 1589092 1590612 R methylmalonic acid semialdehyde dehydrogenase complement(1589092..1590612) Burkholderia cenocepacia J2315 6931737 YP_002230571.1 CDS BCAL1440 NC_011000.1 1590723 1591658 D LysR family regulatory protein 1590723..1591658 Burkholderia cenocepacia J2315 6933851 YP_002230572.1 CDS BCAL1441 NC_011000.1 1591776 1592003 D SirA-like protein 1591776..1592003 Burkholderia cenocepacia J2315 6931738 YP_002230573.1 CDS BCAL1442 NC_011000.1 1592287 1592721 D hypothetical protein 1592287..1592721 Burkholderia cenocepacia J2315 6931739 YP_002230574.1 CDS BCAL1443 NC_011000.1 1592977 1593693 D two-component regulatory system, response regulator protein 1592977..1593693 Burkholderia cenocepacia J2315 6931740 YP_002230575.1 CDS BCAL1444 NC_011000.1 1593690 1595051 D hypothetical protein 1593690..1595051 Burkholderia cenocepacia J2315 6931741 YP_002230576.1 CDS BCAL1445 NC_011000.1 1595062 1597449 D two-component regulatory system, sensor kinase protein 1595062..1597449 Burkholderia cenocepacia J2315 6931742 YP_002230577.1 CDS BCAL1446 NC_011000.1 1597487 1598101 D putative lipoprotein 1597487..1598101 Burkholderia cenocepacia J2315 6931743 YP_002230578.1 CDS galU NC_011000.1 1598154 1599038 R UTP--glucose-1-phosphate uridylyltransferase complement(1598154..1599038) Burkholderia cenocepacia J2315 6931744 YP_002230579.1 CDS valS NC_011000.1 1599126 1601993 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(1599126..1601993) Burkholderia cenocepacia J2315 6933618 YP_002230580.1 CDS BCAL1449 NC_011000.1 1602125 1604581 D putative helicase 1602125..1604581 Burkholderia cenocepacia J2315 6934233 YP_002230581.1 CDS BCAL1450 NC_011000.1 1604578 1605375 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1604578..1605375 Burkholderia cenocepacia J2315 6931745 YP_002230582.1 CDS fsr NC_011000.1 1605445 1606683 R putative fosmidomycin resistance protein complement(1605445..1606683) Burkholderia cenocepacia J2315 6931746 YP_002230583.1 CDS BCAL1452 NC_011000.1 1607219 1608763 D putative methyl-accepting chemotaxis protein 1607219..1608763 Burkholderia cenocepacia J2315 6933605 YP_002230584.1 CDS BCAL1453 NC_011000.1 1608785 1609660 R Partial matches to fusaric acid resistance proteins Burkholderia cepacia; original database entry for these fusaric acid resistance proteins are probably partial gene fragments; putative fusaric acid resistance transport protein complement(1608785..1609660) Burkholderia cenocepacia J2315 6931747 YP_002230585.1 CDS BCAL1454 NC_011000.1 1609673 1609876 R hypothetical protein complement(1609673..1609876) Burkholderia cenocepacia J2315 6931748 YP_002230586.1 CDS BCAL1455 NC_011000.1 1609873 1612077 R Partial matches to fusaric acid resistance proteins Burkholderia cepacia; original database entry for these fusaric acid resistance proteins are probably partial gene fragments; putative fusaric acid resistance transporter protein complement(1609873..1612077) Burkholderia cenocepacia J2315 6931749 YP_002230587.1 CDS BCAL1456 NC_011000.1 1612092 1613657 R putative fusaric acid resistance outer membrane efflux protein complement(1612092..1613657) Burkholderia cenocepacia J2315 6931750 YP_002230588.1 CDS BCAL1457 NC_011000.1 1613815 1614756 D LysR family regulatory protein 1613815..1614756 Burkholderia cenocepacia J2315 6931751 YP_002230589.1 CDS BCAL1458 NC_011000.1 1614874 1615026 D hypothetical protein 1614874..1615026 Burkholderia cenocepacia J2315 6931752 YP_002230590.1 CDS BCAL1459 NC_011000.1 1615085 1615915 R calcineurin-like phosphoesterase complement(1615085..1615915) Burkholderia cenocepacia J2315 6931753 YP_002230591.1 CDS BCAL1460 NC_011000.1 1615941 1617362 R putative FAD-binding reductase complement(1615941..1617362) Burkholderia cenocepacia J2315 6931754 YP_002230592.1 CDS BCAL1461 NC_011000.1 1617381 1617773 R hypothetical protein complement(1617381..1617773) Burkholderia cenocepacia J2315 6931755 YP_002230593.1 CDS BCAL1462 NC_011000.1 1617770 1618390 R putative Trp repressor binding protein complement(1617770..1618390) Burkholderia cenocepacia J2315 6931756 YP_002230594.1 CDS BCAL1463 NC_011000.1 1618545 1619864 D putative tRNA processing exoribonuclease 1618545..1619864 Burkholderia cenocepacia J2315 6931757 YP_002230595.1 CDS BCAL1464 NC_011000.1 1619880 1620197 R hypothetical protein complement(1619880..1620197) Burkholderia cenocepacia J2315 6931758 YP_002230596.1 CDS BCAL1465 NC_011000.1 1620355 1620810 D hypothetical protein 1620355..1620810 Burkholderia cenocepacia J2315 6931759 YP_002230597.1 CDS BCAL1466 NC_011000.1 1620950 1622884 D major facilitator superfamily protein 1620950..1622884 Burkholderia cenocepacia J2315 6931760 YP_002230598.1 CDS aroC NC_011000.1 1623173 1624273 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1623173..1624273 Burkholderia cenocepacia J2315 6931761 YP_002230599.1 CDS BCAL1468 NC_011000.1 1624424 1626097 R putative electron transport protein complement(1624424..1626097) Burkholderia cenocepacia J2315 6933313 YP_002230600.1 CDS BCAL1469 NC_011000.1 1626277 1627059 D short chain dehydrogenase 1626277..1627059 Burkholderia cenocepacia J2315 6931762 YP_002230601.1 CDS BCAL1470 NC_011000.1 1627137 1627541 D putative thioesterase 1627137..1627541 Burkholderia cenocepacia J2315 6931763 YP_002230602.1 CDS BCAL1471 NC_011000.1 1627670 1628215 R LuxR superfamily regulatory protein complement(1627670..1628215) Burkholderia cenocepacia J2315 6931764 YP_002230603.1 CDS scoA NC_011000.1 1628436 1629140 D succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A 1628436..1629140 Burkholderia cenocepacia J2315 6931765 YP_002230604.1 CDS scoB NC_011000.1 1629142 1629783 D succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B 1629142..1629783 Burkholderia cenocepacia J2315 6934133 YP_002230605.1 CDS BCAL1474 NC_011000.1 1629860 1630606 R short chain dehydrogenase complement(1629860..1630606) Burkholderia cenocepacia J2315 6934134 YP_002230606.1 CDS BCAL1475 NC_011000.1 1630611 1631621 R putative polysaccharide deacetylase complement(1630611..1631621) Burkholderia cenocepacia J2315 6931766 YP_002230607.1 CDS BCAL1476 NC_011000.1 1631633 1632190 R hypothetical protein complement(1631633..1632190) Burkholderia cenocepacia J2315 6931767 YP_002230608.1 CDS BCAL1477 NC_011000.1 1632325 1633233 D LysR family regulatory protein 1632325..1633233 Burkholderia cenocepacia J2315 6931768 YP_002230609.1 CDS BCAL1478 NC_011000.1 1633357 1634253 D family S33 serine peptidase; putative hydrolase 1633357..1634253 Burkholderia cenocepacia J2315 6931769 YP_002230610.1 CDS BCAL1479 NC_011000.1 1634334 1634687 D endoribonuclease L-PSP family protein 1634334..1634687 Burkholderia cenocepacia J2315 6931770 YP_002230611.1 CDS relA NC_011000.1 1634788 1636971 D GTP pyrophosphokinase 1634788..1636971 Burkholderia cenocepacia J2315 6931771 YP_002230612.1 CDS thrS NC_011000.1 1637405 1639312 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1637405..1639312 Burkholderia cenocepacia J2315 6933357 YP_002230613.1 CDS rpmI NC_011000.1 1640077 1640274 D 50S ribosomal protein L35 1640077..1640274 Burkholderia cenocepacia J2315 6933759 YP_002230614.1 CDS rplT NC_011000.1 1640305 1640664 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1640305..1640664 Burkholderia cenocepacia J2315 6934090 YP_002230615.1 CDS pheS NC_011000.1 1640813 1641826 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1640813..1641826 Burkholderia cenocepacia J2315 6934075 YP_002230616.1 CDS pheT NC_011000.1 1641924 1644353 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1641924..1644353 Burkholderia cenocepacia J2315 6933958 YP_002230617.1 CDS ihfA NC_011000.1 1644417 1644812 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1644417..1644812 Burkholderia cenocepacia J2315 6933959 YP_002230618.1 CDS BCAL1488 NC_011000.1 1644871 1645284 D MerR family regulatory protein 1644871..1645284 Burkholderia cenocepacia J2315 6933747 YP_002230619.1 CDS BCAL1489 NC_011000.1 1645301 1646266 R Similar to Anabaena sp. putative transposase SWALL:O68472 (EMBL:AF047044) (320 aa) fasta scores: E(): 3.2e-38, 41.8% id in 311 aa; putative transposase complement(1645301..1646266) Burkholderia cenocepacia J2315 6931772 YP_002230620.1 CDS BCAL1490 NC_011000.1 1646546 1648720 R hypothetical protein complement(1646546..1648720) Burkholderia cenocepacia J2315 6931773 YP_002230621.1 CDS BCAL1491 NC_011000.1 1649051 1649929 R putative tyrosine-protein phosphatase complement(1649051..1649929) Burkholderia cenocepacia J2315 6931774 YP_002230622.1 CDS BCAL1492 NC_011000.1 1650249 1650962 D hypothetical protein 1650249..1650962 Burkholderia cenocepacia J2315 6931775 YP_002230623.1 CDS BCAL1493 NC_011000.1 1651311 1652519 D hypothetical protein 1651311..1652519 Burkholderia cenocepacia J2315 6933358 YP_002230624.1 CDS BCAL1494 NC_011000.1 1653053 1653343 D putative monooxygenase 1653053..1653343 Burkholderia cenocepacia J2315 6931777 YP_002230625.1 CDS BCAL1495 NC_011000.1 1653391 1653648 R hypothetical protein complement(1653391..1653648) Burkholderia cenocepacia J2315 6931778 YP_002230626.1 CDS BCAL1496 NC_011000.1 1653785 1654060 R hypothetical protein complement(1653785..1654060) Burkholderia cenocepacia J2315 6931779 YP_002230627.1 CDS BCAL1497 NC_011000.1 1654270 1654986 R hypothetical protein complement(1654270..1654986) Burkholderia cenocepacia J2315 6931780 YP_002230628.1 CDS BCAL1498 NC_011000.1 1655147 1655464 D hypothetical protein 1655147..1655464 Burkholderia cenocepacia J2315 6931781 YP_002230629.1 CDS BCAL1499 NC_011000.1 1655659 1655910 R hypothetical protein complement(1655659..1655910) Burkholderia cenocepacia J2315 6931782 YP_002230630.1 CDS BCAL1500 NC_011000.1 1656109 1656507 R hypothetical protein complement(1656109..1656507) Burkholderia cenocepacia J2315 6931783 YP_002230631.1 CDS BCAL1501 NC_011000.1 1656939 1657841 D LysR family regulatory protein 1656939..1657841 Burkholderia cenocepacia J2315 6931784 YP_002230632.1 CDS BCAL1502 NC_011000.1 1657916 1659118 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1657916..1659118 Burkholderia cenocepacia J2315 6931785 YP_002230633.1 CDS BCAL1503 NC_011000.1 1659391 1660428 D putative transcriptional regulator protein 1659391..1660428 Burkholderia cenocepacia J2315 6931786 YP_002230634.1 CDS BCAL1504 NC_011000.1 1660489 1662240 D RNA pseudouridylate synthase family protein 1660489..1662240 Burkholderia cenocepacia J2315 6931787 YP_002230635.1 CDS BCAL1505 NC_011000.1 1662671 1663129 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1662671..1663129 Burkholderia cenocepacia J2315 6931788 YP_002230636.1 CDS nusA NC_011000.1 1663129 1664604 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1663129..1664604 Burkholderia cenocepacia J2315 6931789 YP_002230637.1 CDS infB NC_011000.1 1664696 1667611 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1664696..1667611 Burkholderia cenocepacia J2315 6933888 YP_002230638.1 CDS rbfA NC_011000.1 1667727 1668125 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1667727..1668125 Burkholderia cenocepacia J2315 6933758 YP_002230639.1 CDS truB NC_011000.1 1668139 1669071 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1668139..1669071 Burkholderia cenocepacia J2315 6931790 YP_002230640.1 CDS BCAL1510 NC_011000.1 1669180 1670739 R putative multidrug resistance transporter protein complement(1669180..1670739) Burkholderia cenocepacia J2315 6934204 YP_002230641.1 CDS emrA NC_011000.1 1670768 1671982 R putative multidrug resistance transport protein complement(1670768..1671982) Burkholderia cenocepacia J2315 6931791 YP_002230642.1 CDS BCAL1512 NC_011000.1 1672035 1673531 R outer membrane efflux protein complement(1672035..1673531) Burkholderia cenocepacia J2315 6933531 YP_002230643.1 CDS BCAL1513 NC_011000.1 1673619 1674059 R MarR family regulatory protein complement(1673619..1674059) Burkholderia cenocepacia J2315 6931792 YP_002230644.1 CDS typA NC_011000.1 1674437 1676263 D GTP-binding protein 1674437..1676263 Burkholderia cenocepacia J2315 6931793 YP_002230645.1 CDS sucA NC_011000.1 1676580 1679444 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1676580..1679444 Burkholderia cenocepacia J2315 6934210 YP_002230646.1 CDS sucB NC_011000.1 1679581 1680858 D component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1679581..1680858 Burkholderia cenocepacia J2315 6934157 YP_002230647.1 CDS odhL NC_011000.1 1680940 1682370 D E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1680940..1682370 Burkholderia cenocepacia J2315 6934158 YP_002230648.1 CDS BCAL1518 NC_011000.1 1682469 1683566 D AFG1-like ATPase 1682469..1683566 Burkholderia cenocepacia J2315 6933891 YP_002230649.1 CDS BCAL1519 NC_011000.1 1683715 1684125 D putative transposase 1683715..1684125 Burkholderia cenocepacia J2315 6931794 YP_002230650.1 CDS BCAL1520 NC_011000.1 1684227 1684688 R putative lipoprotein complement(1684227..1684688) Burkholderia cenocepacia J2315 6931795 YP_002230651.1 CDS BCAL1522 NC_011000.1 1684863 1686548 R putative exported heme utilisation related protein complement(1684863..1686548) Burkholderia cenocepacia J2315 6931796 YP_002230652.1 CDS BCAL1523 NC_011000.1 1686693 1688117 R putative lipoprotein complement(1686693..1688117) Burkholderia cenocepacia J2315 6931797 YP_002230653.1 CDS BCAL1524 NC_011000.1 1688158 1689831 R putative lipoprotein complement(1688158..1689831) Burkholderia cenocepacia J2315 6931798 YP_002230654.1 CDS BCAL1525 NC_011000.1 1690509 1690679 D flp type pilus subunit 1690509..1690679 Burkholderia cenocepacia J2315 6931799 YP_002230655.1 CDS BCAL1525a NC_011000.1 1690767 1691261 D subfamily A24A aspartic peptidase; putative flp type pilus leader peptidase 1690767..1691261 Burkholderia cenocepacia J2315 6931800 YP_002230656.1 CDS BCAL1526 NC_011000.1 1691258 1691752 D putative flp type pilus assembly protein 1691258..1691752 Burkholderia cenocepacia J2315 6931801 YP_002230657.1 CDS BCAL1527 NC_011000.1 1691847 1692752 D flp type pilus assembly protein 1691847..1692752 Burkholderia cenocepacia J2315 6931802 YP_002230658.1 CDS BCAL1528 NC_011000.1 1692775 1694106 D flp type pilus assembly protein 1692775..1694106 Burkholderia cenocepacia J2315 6931803 YP_002230659.1 CDS BCAL1529 NC_011000.1 1694182 1695420 D flp pilus type assembly-related protein 1694182..1695420 Burkholderia cenocepacia J2315 6931804 YP_002230660.1 CDS BCAL1530 NC_011000.1 1695424 1696776 D flp pilus type assembly protein 1695424..1696776 Burkholderia cenocepacia J2315 6931805 YP_002230661.1 CDS BCAL1531 NC_011000.1 1696769 1697749 D flp type pilus assembly protein 1696769..1697749 Burkholderia cenocepacia J2315 6931806 YP_002230662.1 CDS BCAL1532 NC_011000.1 1697754 1698752 D flp type pilus assembly protein 1697754..1698752 Burkholderia cenocepacia J2315 6931807 YP_002230663.1 CDS BCAL1533 NC_011000.1 1698749 1699609 D putative lipoprotein 1698749..1699609 Burkholderia cenocepacia J2315 6931808 YP_002230664.1 CDS BCAL1534 NC_011000.1 1699633 1699962 D hypothetical protein 1699633..1699962 Burkholderia cenocepacia J2315 6931809 YP_002230665.1 CDS BCAL1535 NC_011000.1 1700038 1701786 D hypothetical protein 1700038..1701786 Burkholderia cenocepacia J2315 6931810 YP_002230666.1 CDS BCAL1536 NC_011000.1 1701800 1703191 D putative sigma-54 related transcriptional regulatory protein 1701800..1703191 Burkholderia cenocepacia J2315 6931811 YP_002230667.1 CDS BCAL1537 NC_011000.1 1703255 1703953 D hypothetical protein 1703255..1703953 Burkholderia cenocepacia J2315 6931812 YP_002230668.1 CDS BCAL1538 NC_011000.1 1704035 1704601 R Hfq protein complement(1704035..1704601) Burkholderia cenocepacia J2315 6931813 YP_002230669.1 CDS BCAL1539 NC_011000.1 1704897 1705181 D hypothetical protein 1704897..1705181 Burkholderia cenocepacia J2315 6931814 YP_002230670.1 CDS BCAL1540 NC_011000.1 1705209 1706114 R hypothetical protein complement(1705209..1706114) Burkholderia cenocepacia J2315 6931815 YP_002230671.1 CDS BCAL1541 NC_011000.1 1706156 1707910 R putative acyl-CoA synthetase complement(1706156..1707910) Burkholderia cenocepacia J2315 6931816 YP_002230672.1 CDS BCAL1542 NC_011000.1 1708068 1708889 R TetR family regulatory protein complement(1708068..1708889) Burkholderia cenocepacia J2315 6931817 YP_002230673.1 CDS BCAL1543 NC_011000.1 1709105 1710367 R major facilitator superfamily protein complement(1709105..1710367) Burkholderia cenocepacia J2315 6931818 YP_002230674.1 CDS BCAL1544 NC_011000.1 1710631 1711149 D putative acetyltransferase 1710631..1711149 Burkholderia cenocepacia J2315 6931819 YP_002230675.1 CDS BCAL1545 NC_011000.1 1711275 1711901 D hypothetical protein 1711275..1711901 Burkholderia cenocepacia J2315 6931820 YP_002230676.1 CDS BCAL1546 NC_011000.1 1711927 1713657 D putative sulfate transporter protein 1711927..1713657 Burkholderia cenocepacia J2315 6931821 YP_002230677.1 CDS BCAL1547 NC_011000.1 1713691 1714626 R carbohydrate kinase complement(1713691..1714626) Burkholderia cenocepacia J2315 6931822 YP_002230678.1 CDS BCAL1548 NC_011000.1 1714761 1715705 R putative sugar ABC transporter lipoprotein complement(1714761..1715705) Burkholderia cenocepacia J2315 6931823 YP_002230679.1 CDS BCAL1549 NC_011000.1 1715806 1716843 R putative sugar ABC transporter membrane protein complement(1715806..1716843) Burkholderia cenocepacia J2315 6931824 YP_002230680.1 CDS BCAL1550 NC_011000.1 1716886 1718412 R putative sugar ABC transporter ATP-binding protein complement(1716886..1718412) Burkholderia cenocepacia J2315 6931825 YP_002230681.1 CDS BCAL1551 NC_011000.1 1718426 1719673 R ROK family regulatory protein complement(1718426..1719673) Burkholderia cenocepacia J2315 6931826 YP_002230682.1 CDS BCAL1552 NC_011000.1 1720497 1721486 R putative extracellular substrate-binding protein complement(1720497..1721486) Burkholderia cenocepacia J2315 6933360 YP_002230683.1 CDS BCAL1553 NC_011000.1 1722010 1724484 D putative ribonuclease 1722010..1724484 Burkholderia cenocepacia J2315 6933361 YP_002230684.1 CDS BCAL1554 NC_011000.1 1724633 1725376 D putative tRNA/rRNA methyltransferase 1724633..1725376 Burkholderia cenocepacia J2315 6931829 YP_002230685.1 CDS BCAL1555 NC_011000.1 1725486 1726358 D putative N-acetylmuramoyl-L-alanine amidase 1725486..1726358 Burkholderia cenocepacia J2315 6931830 YP_002230686.1 CDS rpiA NC_011000.1 1726451 1727146 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1726451..1727146 Burkholderia cenocepacia J2315 6931831 YP_002230687.1 CDS BCAL1557 NC_011000.1 1727429 1728145 D GntR family regulatory protein 1727429..1728145 Burkholderia cenocepacia J2315 6934058 YP_002230688.1 CDS BCAL1559 NC_011000.1 1729077 1729787 R hypothetical protein complement(1729077..1729787) Burkholderia cenocepacia J2315 6931832 YP_002230689.1 CDS BCAL1560 NC_011000.1 1729861 1732089 R hypothetical protein complement(1729861..1732089) Burkholderia cenocepacia J2315 6931833 YP_002230690.1 CDS BCAL1561 NC_011000.1 1732097 1733074 R hypothetical protein complement(1732097..1733074) Burkholderia cenocepacia J2315 6931834 YP_002230691.1 CDS BCAL1562 NC_011000.1 1733074 1733673 R hypothetical protein complement(1733074..1733673) Burkholderia cenocepacia J2315 6931835 YP_002230692.1 CDS BCAL1563 NC_011000.1 1733676 1734797 R phage baseplate protein complement(1733676..1734797) Burkholderia cenocepacia J2315 6931836 YP_002230693.1 CDS BCAL1564 NC_011000.1 1734794 1735375 R hypothetical protein complement(1734794..1735375) Burkholderia cenocepacia J2315 6931837 YP_002230694.1 CDS BCAL1565 NC_011000.1 1735460 1735981 R hypothetical protein complement(1735460..1735981) Burkholderia cenocepacia J2315 6931838 YP_002230695.1 CDS BCAL1566 NC_011000.1 1735981 1737138 R putative phage tail protein complement(1735981..1737138) Burkholderia cenocepacia J2315 6931839 YP_002230696.1 CDS BCAL1567 NC_011000.1 1737144 1738514 R putative phage tail protein complement(1737144..1738514) Burkholderia cenocepacia J2315 6931840 YP_002230697.1 CDS BCAL1568 NC_011000.1 1738514 1740940 R putative phage tail length determination protein complement(1738514..1740940) Burkholderia cenocepacia J2315 6931841 YP_002230698.1 CDS BCAL1569 NC_011000.1 1740998 1741552 R hypothetical protein complement(1740998..1741552) Burkholderia cenocepacia J2315 6931842 YP_002230699.1 CDS BCAL1570 NC_011000.1 1741635 1742006 R hypothetical protein complement(1741635..1742006) Burkholderia cenocepacia J2315 6931843 YP_002230700.1 CDS BCAL1571 NC_011000.1 1742052 1743530 R putative prophage tail sheath protein complement(1742052..1743530) Burkholderia cenocepacia J2315 6931844 YP_002230701.1 CDS BCAL1572 NC_011000.1 1743574 1743777 R hypothetical protein complement(1743574..1743777) Burkholderia cenocepacia J2315 6931845 YP_002230702.1 CDS BCAL1573 NC_011000.1 1743836 1744438 R hypothetical protein complement(1743836..1744438) Burkholderia cenocepacia J2315 6931846 YP_002230703.1 CDS BCAL1574 NC_011000.1 1744438 1744869 R hypothetical protein complement(1744438..1744869) Burkholderia cenocepacia J2315 6931847 YP_002230704.1 CDS BCAL1575 NC_011000.1 1744866 1745369 R hypothetical protein complement(1744866..1745369) Burkholderia cenocepacia J2315 6931848 YP_002230705.1 CDS BCAL1576 NC_011000.1 1745366 1745755 R hypothetical protein complement(1745366..1745755) Burkholderia cenocepacia J2315 6931849 YP_002230706.1 CDS BCAL1577 NC_011000.1 1745830 1746777 R hypothetical protein complement(1745830..1746777) Burkholderia cenocepacia J2315 6931850 YP_002230707.1 CDS BCAL1578 NC_011000.1 1746828 1747184 R hypothetical protein complement(1746828..1747184) Burkholderia cenocepacia J2315 6931851 YP_002230708.1 CDS BCAL1579 NC_011000.1 1747230 1748375 R hypothetical protein complement(1747230..1748375) Burkholderia cenocepacia J2315 6931852 YP_002230709.1 CDS BCAL1580 NC_011000.1 1748589 1748987 R hypothetical protein complement(1748589..1748987) Burkholderia cenocepacia J2315 6931853 YP_002230710.1 CDS BCAL1581 NC_011000.1 1748984 1749424 R hypothetical protein complement(1748984..1749424) Burkholderia cenocepacia J2315 6931854 YP_002230711.1 CDS BCAL1582 NC_011000.1 1749426 1749746 R hypothetical protein complement(1749426..1749746) Burkholderia cenocepacia J2315 6931855 YP_002230712.1 CDS BCAL1583 NC_011000.1 1749746 1749913 R hypothetical protein complement(1749746..1749913) Burkholderia cenocepacia J2315 6931856 YP_002230713.1 CDS BCAL1584 NC_011000.1 1749910 1750743 R Codons 90 to 235 are similar to N-terminus to codon 182 of Burkholderia cepacia phage Bcep22 gp4 SWALL:AAQ54940 (EMBL:AY349011) (330 aa) fasta scores: E(): 3.8e-10, 38.99% id in 159 aa; hypothetical protein complement(1749910..1750743) Burkholderia cenocepacia J2315 6931857 YP_002230714.1 CDS hupB NC_011000.1 1750820 1751092 R histone-like DNA-binding phage protein complement(1750820..1751092) Burkholderia cenocepacia J2315 6931858 YP_002230715.1 CDS BCAL1586 NC_011000.1 1751155 1751547 R hypothetical protein complement(1751155..1751547) Burkholderia cenocepacia J2315 6933739 YP_002230716.1 CDS BCAL1587 NC_011000.1 1751558 1752184 R hypothetical protein complement(1751558..1752184) Burkholderia cenocepacia J2315 6931859 YP_002230717.1 CDS BCAL1588 NC_011000.1 1752181 1752768 R hypothetical protein complement(1752181..1752768) Burkholderia cenocepacia J2315 6931860 YP_002230718.1 CDS BCAL1589 NC_011000.1 1752755 1753060 R hypothetical protein complement(1752755..1753060) Burkholderia cenocepacia J2315 6931861 YP_002230719.1 CDS BCAL1590 NC_011000.1 1753057 1753245 R N-terminus is similar to Streptomyces avermitilis putative peptidase sav2663 SWALL:Q82JU1 (EMBL:AP005031) (437 aa) fasta scores: E(): 3.5, 36.2% id in 58 aa; hypothetical protein complement(1753057..1753245) Burkholderia cenocepacia J2315 6931862 YP_002230720.1 CDS BCAL1591 NC_011000.1 1753253 1754245 R putative phage DNA transposition protein complement(1753253..1754245) Burkholderia cenocepacia J2315 6931863 YP_002230721.1 CDS BCAL1592 NC_011000.1 1754255 1755880 R putative phage transposition protein complement(1754255..1755880) Burkholderia cenocepacia J2315 6931864 YP_002230722.1 CDS BCAL1593 NC_011000.1 1755920 1756972 R hypothetical protein complement(1755920..1756972) Burkholderia cenocepacia J2315 6931865 YP_002230723.1 CDS BCAL1594 NC_011000.1 1756969 1757184 R hypothetical protein complement(1756969..1757184) Burkholderia cenocepacia J2315 6931866 YP_002230724.1 CDS BCAL1595 NC_011000.1 1757242 1757712 D putative DNA-binding phage protein 1757242..1757712 Burkholderia cenocepacia J2315 6931867 YP_002230725.1 CDS BCAL1596 NC_011000.1 1757767 1758300 D hypothetical protein 1757767..1758300 Burkholderia cenocepacia J2315 6931868 YP_002230726.1 CDS BCAL1597 NC_011000.1 1758293 1758901 D hypothetical protein 1758293..1758901 Burkholderia cenocepacia J2315 6931869 YP_002230727.1 CDS BCAL1598 NC_011000.1 1759043 1759417 D hypothetical protein 1759043..1759417 Burkholderia cenocepacia J2315 6931870 YP_002230728.1 CDS BCAL1599 NC_011000.1 1759414 1760085 D putative phage transglycosylase 1759414..1760085 Burkholderia cenocepacia J2315 6931871 YP_002230729.1 CDS BCAL1599a NC_011000.1 1760082 1760543 D hypothetical protein 1760082..1760543 Burkholderia cenocepacia J2315 6931872 YP_002230730.1 CDS BCAL1599b NC_011000.1 1760648 1760872 D hypothetical protein 1760648..1760872 Burkholderia cenocepacia J2315 6931873 YP_002230731.1 CDS BCAL1601 NC_011000.1 1760869 1761159 D hypothetical protein 1760869..1761159 Burkholderia cenocepacia J2315 6931874 YP_002230732.1 CDS BCAL1602 NC_011000.1 1761163 1761660 D putative DNA-binding phage protein 1761163..1761660 Burkholderia cenocepacia J2315 6931875 YP_002230733.1 CDS BCAL1603 NC_011000.1 1761667 1763283 D hypothetical protein 1761667..1763283 Burkholderia cenocepacia J2315 6931876 YP_002230734.1 CDS BCAL1604 NC_011000.1 1763273 1764808 D hypothetical protein 1763273..1764808 Burkholderia cenocepacia J2315 6931877 YP_002230735.1 CDS BCAL1605 NC_011000.1 1764853 1765113 D hypothetical protein 1764853..1765113 Burkholderia cenocepacia J2315 6931878 YP_002230736.1 CDS BCAL1606 NC_011000.1 1765114 1766346 D hypothetical protein 1765114..1766346 Burkholderia cenocepacia J2315 6931879 YP_002230737.1 CDS BCAL1609 NC_011000.1 1766927 1767619 R binding-protein-dependent transport system inner membrane protein complement(1766927..1767619) Burkholderia cenocepacia J2315 6931880 YP_002230738.1 CDS BCAL1610 NC_011000.1 1767742 1768536 R periplasmic cystine-binding protein complement(1767742..1768536) Burkholderia cenocepacia J2315 6931881 YP_002230739.1 CDS pyrD NC_011000.1 1768636 1769673 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(1768636..1769673) Burkholderia cenocepacia J2315 6931882 YP_002230740.1 CDS BCAL1612 NC_011000.1 1769772 1770602 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1769772..1770602) Burkholderia cenocepacia J2315 6934015 YP_002230741.1 CDS aat NC_011000.1 1770636 1771400 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(1770636..1771400) Burkholderia cenocepacia J2315 6931883 YP_002230742.1 CDS BCAL1614 NC_011000.1 1771412 1771957 R NUDIX hydrolase complement(1771412..1771957) Burkholderia cenocepacia J2315 6931884 YP_002230743.1 CDS BCAL1615 NC_011000.1 1772406 1772903 D hypothetical protein 1772406..1772903 Burkholderia cenocepacia J2315 6933362 YP_002230744.1 CDS qacE NC_011000.1 1772907 1773245 D quaternary ammonium compound-resistance protein 1772907..1773245 Burkholderia cenocepacia J2315 6931886 YP_002230745.1 CDS BCAL1617 NC_011000.1 1773328 1774431 D catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 1773328..1774431 Burkholderia cenocepacia J2315 6934021 YP_002230746.1 CDS BCAL1618 NC_011000.1 1774564 1774992 R hypothetical protein complement(1774564..1774992) Burkholderia cenocepacia J2315 6931887 YP_002230747.1 CDS ssuD NC_011000.1 1775334 1776491 D catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 1775334..1776491 Burkholderia cenocepacia J2315 6931888 YP_002230748.1 CDS ssuC NC_011000.1 1776508 1777320 D aliphatic sulfonates transport permease 1776508..1777320 Burkholderia cenocepacia J2315 6934155 YP_002230749.1 CDS ssuB NC_011000.1 1777317 1778279 D aliphatic sulfonates ABC transporter ATP-binding protein 1777317..1778279 Burkholderia cenocepacia J2315 6934154 YP_002230750.1 CDS mopII NC_011000.1 1778337 1778552 D molybdenum-pterin binding protein II 1778337..1778552 Burkholderia cenocepacia J2315 6934153 YP_002230751.1 CDS BCAL1623 NC_011000.1 1778697 1778894 D hypothetical protein 1778697..1778894 Burkholderia cenocepacia J2315 6933838 YP_002230752.1 CDS BCAL1624 NC_011000.1 1778950 1779195 D hypothetical protein 1778950..1779195 Burkholderia cenocepacia J2315 6931889 YP_002230753.1 CDS BCAL1625 NC_011000.1 1779248 1780309 D tRNA-dihydrouridine synthase A 1779248..1780309 Burkholderia cenocepacia J2315 6931890 YP_002230754.1 CDS BCAL1626 NC_011000.1 1780659 1780907 D hypothetical protein 1780659..1780907 Burkholderia cenocepacia J2315 6933363 YP_002230755.1 CDS BCAL1627 NC_011000.1 1781429 1781944 D acetyltransferase (GNAT) family protein 1781429..1781944 Burkholderia cenocepacia J2315 6931892 YP_002230756.1 CDS BCAL1628 NC_011000.1 1782030 1782494 R hypothetical protein complement(1782030..1782494) Burkholderia cenocepacia J2315 6931893 YP_002230757.1 CDS BCAL1629 NC_011000.1 1782796 1783191 D hypothetical protein 1782796..1783191 Burkholderia cenocepacia J2315 6931894 YP_002230758.1 CDS BCAL1630 NC_011000.1 1783975 1784718 R hypothetical protein complement(1783975..1784718) Burkholderia cenocepacia J2315 6931895 YP_002230759.1 CDS BCAL1631 NC_011000.1 1784902 1785210 D hypothetical protein 1784902..1785210 Burkholderia cenocepacia J2315 6931896 YP_002230760.1 CDS BCAL1632 NC_011000.1 1785251 1785499 D putative lipoprotein 1785251..1785499 Burkholderia cenocepacia J2315 6931897 YP_002230761.1 CDS BCAL1634 NC_011000.1 1785896 1786369 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1785896..1786369 Burkholderia cenocepacia J2315 6931899 YP_002230762.1 CDS BCAL1635 NC_011000.1 1786447 1787418 R putative cyclic-di-GMP signaling protein complement(1786447..1787418) Burkholderia cenocepacia J2315 6931900 YP_002230763.1 CDS BCAL1635a NC_011000.1 1787683 1787901 D hypothetical protein 1787683..1787901 Burkholderia cenocepacia J2315 6931901 YP_002230764.1 CDS BCAL1636 NC_011000.1 1788062 1788685 R putative exported endonuclease complement(1788062..1788685) Burkholderia cenocepacia J2315 6931902 YP_002230765.1 CDS BCAL1637 NC_011000.1 1789029 1789517 R putative DNA-binding protein complement(1789029..1789517) Burkholderia cenocepacia J2315 6931903 YP_002230766.1 CDS BCAL1638 NC_011000.1 1789705 1790142 D thioesterase superfamily protein 1789705..1790142 Burkholderia cenocepacia J2315 6931904 YP_002230767.1 CDS BCAL1639 NC_011000.1 1790290 1791342 D putative oxidoreductase 1790290..1791342 Burkholderia cenocepacia J2315 6931905 YP_002230768.1 CDS BCAL1640 NC_011000.1 1791420 1792706 R major facilitator superfamily protein complement(1791420..1792706) Burkholderia cenocepacia J2315 6931906 YP_002230769.1 CDS BCAL1641 NC_011000.1 1792742 1794163 R subfamily M20A metallo peptidase; hypothetical protein complement(1792742..1794163) Burkholderia cenocepacia J2315 6931907 YP_002230770.1 CDS BCAL1642 NC_011000.1 1794305 1795279 D LysR family regulatory protein 1794305..1795279 Burkholderia cenocepacia J2315 6931908 YP_002230771.1 CDS BCAL1643 NC_011000.1 1795344 1796474 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 1795344..1796474 Burkholderia cenocepacia J2315 6931909 YP_002230772.1 CDS BCAL1644 NC_011000.1 1796471 1797529 D permease 1796471..1797529 Burkholderia cenocepacia J2315 6931910 YP_002230773.1 CDS BCAL1645 NC_011000.1 1797631 1798053 D hypothetical protein 1797631..1798053 Burkholderia cenocepacia J2315 6931911 YP_002230774.1 CDS BCAL1646 NC_011000.1 1798091 1798924 R putative oligosaccharide ABC transporter protein complement(1798091..1798924) Burkholderia cenocepacia J2315 6931912 YP_002230775.1 CDS BCAL1647 NC_011000.1 1798931 1799845 R involved in the export of lipooligosaccharides during nodulation; nodulation ABC transporter NodI complement(1798931..1799845) Burkholderia cenocepacia J2315 6931913 YP_002230776.1 CDS BCAL1648 NC_011000.1 1800176 1800673 D putative stress-related protein 1800176..1800673 Burkholderia cenocepacia J2315 6931914 YP_002230777.1 CDS BCAL1649 NC_011000.1 1800761 1801480 R hypothetical protein complement(1800761..1801480) Burkholderia cenocepacia J2315 6931915 YP_002230778.1 CDS BCAL1650 NC_011000.1 1801510 1801845 R hypothetical protein complement(1801510..1801845) Burkholderia cenocepacia J2315 6931916 YP_002230779.1 CDS lexA NC_011000.1 1801872 1802519 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1801872..1802519) Burkholderia cenocepacia J2315 6931917 YP_002230780.1 CDS sbp NC_011000.1 1802784 1803821 D sulfate-binding protein 1802784..1803821 Burkholderia cenocepacia J2315 6933788 YP_002230781.1 CDS cysT NC_011000.1 1803945 1804838 D sulfate transport system permease 1803945..1804838 Burkholderia cenocepacia J2315 6934132 YP_002230782.1 CDS cysW NC_011000.1 1804835 1805779 D sulfate transport system permease 1804835..1805779 Burkholderia cenocepacia J2315 6933481 YP_002230783.1 CDS cysA NC_011000.1 1805793 1806851 D sulfate ABC transporter ATP-binding protein 1805793..1806851 Burkholderia cenocepacia J2315 6933482 YP_002230784.1 CDS ssuR NC_011000.1 1806927 1807853 D transcriptional regulator CysB-like protein 1806927..1807853 Burkholderia cenocepacia J2315 6933470 YP_002230785.1 CDS BCAL1657 NC_011000.1 1808581 1809531 D putative ribose transport system, substrate-binding protein 1808581..1809531 Burkholderia cenocepacia J2315 6934156 YP_002230786.1 CDS BCAL1658 NC_011000.1 1809677 1811290 D putative ribose ABC transporter ATP-binding protein 1809677..1811290 Burkholderia cenocepacia J2315 6931918 YP_002230787.1 CDS BCAL1659 NC_011000.1 1811287 1812306 D putative ribose transport system, permease 1811287..1812306 Burkholderia cenocepacia J2315 6931919 YP_002230788.1 CDS BCAL1660 NC_011000.1 1812341 1813372 D putative ribose operon repressor 1812341..1813372 Burkholderia cenocepacia J2315 6931920 YP_002230789.1 CDS BCAL1661 NC_011000.1 1813369 1814298 D putative ribokinase 1813369..1814298 Burkholderia cenocepacia J2315 6931921 YP_002230790.1 CDS BCAL1662 NC_011000.1 1814587 1816356 D putative methyl-accepting chemotaxis protein 1814587..1816356 Burkholderia cenocepacia J2315 6931922 YP_002230791.1 CDS BCAL1663 NC_011000.1 1816908 1818830 D PrkA family serine protein kinase 1816908..1818830 Burkholderia cenocepacia J2315 6931923 YP_002230792.1 CDS BCAL1664 NC_011000.1 1818956 1820224 D hypothetical protein 1818956..1820224 Burkholderia cenocepacia J2315 6931924 YP_002230793.1 CDS BCAL1665 NC_011000.1 1820377 1821900 D SpoVR family protein 1820377..1821900 Burkholderia cenocepacia J2315 6931925 YP_002230794.1 CDS kgtP NC_011000.1 1822133 1823437 D alpha-ketoglutarate permease 1822133..1823437 Burkholderia cenocepacia J2315 6931926 YP_002230795.1 CDS BCAL1667 NC_011000.1 1823560 1823637 D hypothetical protein 1823560..1823637 Burkholderia cenocepacia J2315 6933775 YP_002230796.1 CDS BCAL1668 NC_011000.1 1823895 1824710 D periplasmic solute-binding protein 1823895..1824710 Burkholderia cenocepacia J2315 6931927 YP_002230797.1 CDS BCAL1669 NC_011000.1 1824784 1825527 D putative amino acid transport system, membrane protein 1824784..1825527 Burkholderia cenocepacia J2315 6931928 YP_002230798.1 CDS BCAL1670 NC_011000.1 1825497 1826255 D putative amino acid transport system, membrane protein 1825497..1826255 Burkholderia cenocepacia J2315 6931929 YP_002230799.1 CDS BCAL1671 NC_011000.1 1826418 1827683 R subfamily M23B metallo peptidase; subfamily M23B metalopeptidase complement(1826418..1827683) Burkholderia cenocepacia J2315 6931930 YP_002230800.1 CDS amrA NC_011000.1 1828787 1830022 D MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; periplasmic multidrug efflux lipoprotein 1828787..1830022 Burkholderia cenocepacia J2315 6931932 YP_002230801.1 CDS amrB NC_011000.1 1830038 1833178 D MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; multidrug efflux protein 1830038..1833178 Burkholderia cenocepacia J2315 6933295 YP_002230802.1 CDS BCAL1676 NC_011000.1 1833175 1834638 D multidrug efflux system outer membrane protein 1833175..1834638 Burkholderia cenocepacia J2315 6933296 YP_002230803.1 CDS BCAL1677 NC_011000.1 1835501 1836013 D putative type-1 fimbrial protein 1835501..1836013 Burkholderia cenocepacia J2315 6931933 YP_002230804.1 CDS BCAL1678 NC_011000.1 1836103 1838589 D putative outer membrane usher protein 1836103..1838589 Burkholderia cenocepacia J2315 6931934 YP_002230805.1 CDS BCAL1679 NC_011000.1 1838605 1839351 D putative fimbrial chaperone 1838605..1839351 Burkholderia cenocepacia J2315 6931935 YP_002230806.1 CDS BCAL1680 NC_011000.1 1839348 1840373 D putative type-1 fimbrial protein 1839348..1840373 Burkholderia cenocepacia J2315 6931936 YP_002230807.1 CDS BCAL1681 NC_011000.1 1840458 1841807 D hypothetical protein 1840458..1841807 Burkholderia cenocepacia J2315 6931937 YP_002230808.1 CDS BCAL1682 NC_011000.1 1841986 1842750 R putative methyltransferase complement(1841986..1842750) Burkholderia cenocepacia J2315 6931938 YP_002230809.1 CDS BCAL1683 NC_011000.1 1842793 1843320 R hypothetical protein complement(1842793..1843320) Burkholderia cenocepacia J2315 6931939 YP_002230810.1 CDS BCAL1684 NC_011000.1 1843614 1844279 D two-component regulatory system, response regulator protein 1843614..1844279 Burkholderia cenocepacia J2315 6931940 YP_002230811.1 CDS BCAL1685 NC_011000.1 1844276 1845655 D two-component regulatory system, sensor kinase protein 1844276..1845655 Burkholderia cenocepacia J2315 6931941 YP_002230812.1 CDS BCAL1686 NC_011000.1 1845731 1845868 R hypothetical protein complement(1845731..1845868) Burkholderia cenocepacia J2315 6931942 YP_002230813.1 CDS BCAL1687 NC_011000.1 1845915 1846160 R hypothetical protein complement(1845915..1846160) Burkholderia cenocepacia J2315 6931943 YP_002230814.1 CDS orbS NC_011000.1 1846454 1847122 D RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease; extracytoplasmic-function sigma-70 factor 1846454..1847122 Burkholderia cenocepacia J2315 6931944 YP_002230815.1 CDS orbH NC_011000.1 1847208 1847450 D MbtH-like protein 1847208..1847450 Burkholderia cenocepacia J2315 6933910 YP_002230816.1 CDS orbG NC_011000.1 1847496 1848503 D putative dioxygenase 1847496..1848503 Burkholderia cenocepacia J2315 6933905 YP_002230817.1 CDS orbC NC_011000.1 1848545 1849351 D putative iron transport-related ATP-binding protein 1848545..1849351 Burkholderia cenocepacia J2315 6933904 YP_002230818.1 CDS orbD NC_011000.1 1849348 1851438 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 1849348..1851438 Burkholderia cenocepacia J2315 6933899 YP_002230819.1 CDS orbF NC_011000.1 1851435 1852235 D putative iron transport-related membrane protein 1851435..1852235 Burkholderia cenocepacia J2315 6933900 YP_002230820.1 CDS orbB NC_011000.1 1852367 1853260 D putative iron transport-related exported protein 1852367..1853260 Burkholderia cenocepacia J2315 6933902 YP_002230821.1 CDS orbE NC_011000.1 1853452 1855197 R ornibactin biosynthesis ABC transport protein complement(1853452..1855197) Burkholderia cenocepacia J2315 6933898 YP_002230822.1 CDS orbI NC_011000.1 1855473 1865141 D ornibactin biosynthesis non-ribosomal peptide synthase 1855473..1865141 Burkholderia cenocepacia J2315 6933901 YP_002230823.1 CDS orbJ NC_011000.1 1865151 1870160 D ornibactin biosynthesis non-ribosomal peptide synthase 1865151..1870160 Burkholderia cenocepacia J2315 6933906 YP_002230824.1 CDS orbK NC_011000.1 1870150 1871187 D ornibactin biosynthesis protein 1870150..1871187 Burkholderia cenocepacia J2315 6933907 YP_002230825.1 CDS pvdA NC_011000.1 1871220 1872596 D putative L-ornithine 5-monooxygenase 1871220..1872596 Burkholderia cenocepacia J2315 6933908 YP_002230826.1 CDS orbA NC_011000.1 1872619 1874886 D ornibactin receptor 1872619..1874886 Burkholderia cenocepacia J2315 6934011 YP_002230827.1 CDS orbF NC_011000.1 1874972 1875811 D ornibactin synthetase F 1874972..1875811 Burkholderia cenocepacia J2315 6933897 YP_002230828.1 CDS orbL NC_011000.1 1875805 1876827 D putative ornibactin biosynthesis protein 1875805..1876827 Burkholderia cenocepacia J2315 6933903 YP_002230829.1 CDS BCAL1703 NC_011000.1 1876985 1878148 D subfamily M20D metallo peptidase; subfamily M20D metalopeptidase 1876985..1878148 Burkholderia cenocepacia J2315 6933909 YP_002230830.1 CDS BCAL1704 NC_011000.1 1878261 1878860 R hypothetical protein complement(1878261..1878860) Burkholderia cenocepacia J2315 6931945 YP_002230831.1 CDS cobB NC_011000.1 1878888 1880192 R responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase complement(1878888..1880192) Burkholderia cenocepacia J2315 6931946 YP_002230832.1 CDS cobO NC_011000.1 1880195 1880797 R catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(1880195..1880797) Burkholderia cenocepacia J2315 6933446 YP_002230833.1 CDS BCAL1707 NC_011000.1 1880833 1881207 R catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG complement(1880833..1881207) Burkholderia cenocepacia J2315 6933454 YP_002230834.1 CDS cobA NC_011000.1 1881207 1881956 R catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase complement(1881207..1881956) Burkholderia cenocepacia J2315 6931947 YP_002230835.1 CDS BCAL1709 NC_011000.1 1882432 1884570 R This TonB-dependent receptor is associated with the cobalamin biosynthesis operon, however it has poor levels of similarity with vitamin B12 transporters associated with cobalamin biosynthesis. Another CDS, BCAM1593, is similar to vitamin B12 transporters. The function of this CDS therefore is unknown and may not be involved with the transport of vitamin B12; TonB-dependent receptor complement(1882432..1884570) Burkholderia cenocepacia J2315 6933268 YP_002230836.1 CDS cobW NC_011000.1 1885314 1886402 D putative cobalamin biosynthesis-related protein 1885314..1886402 Burkholderia cenocepacia J2315 6933364 YP_002230837.1 CDS cobN NC_011000.1 1886409 1890218 D with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 1886409..1890218 Burkholderia cenocepacia J2315 6933456 YP_002230838.1 CDS BCAL1712 NC_011000.1 1890215 1891300 D putative magnesium chelatase protein 1890215..1891300 Burkholderia cenocepacia J2315 6931949 YP_002230839.1 CDS BCAL1713 NC_011000.1 1891369 1891977 D hypothetical protein 1891369..1891977 Burkholderia cenocepacia J2315 6931950 YP_002230840.1 CDS BCAL1714 NC_011000.1 1892040 1892492 D hypothetical protein 1892040..1892492 Burkholderia cenocepacia J2315 6931951 YP_002230841.1 CDS BCAL1715 NC_011000.1 1892545 1893150 D hypothetical protein 1892545..1893150 Burkholderia cenocepacia J2315 6931952 YP_002230842.1 CDS BCAL1716 NC_011000.1 1893176 1893502 D hypothetical protein 1893176..1893502 Burkholderia cenocepacia J2315 6931953 YP_002230843.1 CDS BCAL1717 NC_011000.1 1893536 1893967 R NUDIX hydrolase complement(1893536..1893967) Burkholderia cenocepacia J2315 6931954 YP_002230844.1 CDS BCAL1717A NC_011000.1 1894111 1894371 R hypothetical protein complement(1894111..1894371) Burkholderia cenocepacia J2315 6931955 YP_002230845.1 CDS BCAL1718 NC_011000.1 1894649 1895809 D putative CoA-transferase 1894649..1895809 Burkholderia cenocepacia J2315 6931956 YP_002230846.1 CDS BCAL1719 NC_011000.1 1895936 1897237 D putative citrate transporter 1895936..1897237 Burkholderia cenocepacia J2315 6931957 YP_002230847.1 CDS BCAL1720 NC_011000.1 1897275 1898441 D putative acyl-CoA dehydrogenase 1897275..1898441 Burkholderia cenocepacia J2315 6931958 YP_002230848.1 CDS BCAL1721 NC_011000.1 1898502 1899245 D putative transcriptional regulator 1898502..1899245 Burkholderia cenocepacia J2315 6931959 YP_002230849.1 CDS BCAL1722 NC_011000.1 1899348 1900703 R putative exported chitinase complement(1899348..1900703) Burkholderia cenocepacia J2315 6931960 YP_002230850.1 CDS cobJ NC_011000.1 1901035 1902747 R precorrin-3b C17-methyltransferase complement(1901035..1902747) Burkholderia cenocepacia J2315 6931961 YP_002230851.1 CDS cobI NC_011000.1 1902747 1903481 R catalyzes the formation of precorrin-3 from precorrin-2; precorrin-2 C(20)-methyltransferase complement(1902747..1903481) Burkholderia cenocepacia J2315 6933450 YP_002230852.1 CDS cobH NC_011000.1 1903478 1904104 R catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase complement(1903478..1904104) Burkholderia cenocepacia J2315 6933449 YP_002230853.1 CDS BCAL1726 NC_011000.1 1904097 1905458 R putative oxidoreductase complement(1904097..1905458) Burkholderia cenocepacia J2315 6933448 YP_002230854.1 CDS cobL NC_011000.1 1905858 1907222 D precorrin-6Y C5,15-methyltransferase (decarboxylating) 1905858..1907222 Burkholderia cenocepacia J2315 6933365 YP_002230855.1 CDS cbiD NC_011000.1 1907222 1908310 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1907222..1908310 Burkholderia cenocepacia J2315 6933452 YP_002230856.1 CDS cobK NC_011000.1 1908307 1909038 D CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1908307..1909038 Burkholderia cenocepacia J2315 6931963 YP_002230857.1 CDS cobM NC_011000.1 1909081 1909809 D precorrin-4 C11-methyltransferase 1909081..1909809 Burkholderia cenocepacia J2315 6933451 YP_002230858.1 CDS BCAL1731 NC_011000.1 1909933 1911111 R major facilitator superfamily protein complement(1909933..1911111) Burkholderia cenocepacia J2315 6933453 YP_002230859.1 CDS BCAL1732 NC_011000.1 1911242 1911745 D MarR family regulatory protein 1911242..1911745 Burkholderia cenocepacia J2315 6931964 YP_002230860.1 CDS BCAL1733 NC_011000.1 1911834 1912604 R putative glutathione S-transferase complement(1911834..1912604) Burkholderia cenocepacia J2315 6931965 YP_002230861.1 CDS BCAL1734 NC_011000.1 1912712 1913926 R putative porin protein complement(1912712..1913926) Burkholderia cenocepacia J2315 6931966 YP_002230862.1 CDS BCAL1735 NC_011000.1 1914069 1916762 R LuxR superfamily regulatory protein complement(1914069..1916762) Burkholderia cenocepacia J2315 6931967 YP_002230863.1 CDS BCAL1736 NC_011000.1 1917004 1917936 D hypothetical protein 1917004..1917936 Burkholderia cenocepacia J2315 6931968 YP_002230864.1 CDS BCAL1737 NC_011000.1 1917940 1918935 D putative quinone oxidoreductase 1917940..1918935 Burkholderia cenocepacia J2315 6931969 YP_002230865.1 CDS tauD NC_011000.1 1918946 1919794 D alpha-ketoglutarate-dependent taurine dioxygenase 1918946..1919794 Burkholderia cenocepacia J2315 6931970 YP_002230866.1 CDS BCAL1739 NC_011000.1 1919925 1920980 D hypothetical protein 1919925..1920980 Burkholderia cenocepacia J2315 6934173 YP_002230867.1 CDS BCAL1740 NC_011000.1 1921136 1922464 D major facilitator superfamily protein 1921136..1922464 Burkholderia cenocepacia J2315 6931971 YP_002230868.1 CDS BCAL1741 NC_011000.1 1922496 1923071 D putative hydrolase 1922496..1923071 Burkholderia cenocepacia J2315 6931972 YP_002230869.1 CDS BCAL1742 NC_011000.1 1923382 1924548 D extracellular solute-binding protein 1923382..1924548 Burkholderia cenocepacia J2315 6931973 YP_002230870.1 CDS aglK NC_011000.1 1924598 1925677 D ABC transporter ATP-binding protein 1924598..1925677 Burkholderia cenocepacia J2315 6931974 YP_002230871.1 CDS BCAL1744 NC_011000.1 1925727 1926608 D binding-protein-dependent transport system inner membrane protein 1925727..1926608 Burkholderia cenocepacia J2315 6933291 YP_002230872.1 CDS BCAL1745 NC_011000.1 1926698 1927531 D binding-protein-dependent transport system inner membrane protein 1926698..1927531 Burkholderia cenocepacia J2315 6931975 YP_002230873.1 CDS BCAL1746 NC_011000.1 1927653 1928096 D putative lipoprotein 1927653..1928096 Burkholderia cenocepacia J2315 6931976 YP_002230874.1 CDS BCAL1747A NC_011000.1 1928315 1928527 D hypothetical protein 1928315..1928527 Burkholderia cenocepacia J2315 6931977 YP_002230875.1 CDS hprA NC_011000.1 1928729 1929694 R glycerate dehydrogenase complement(1928729..1929694) Burkholderia cenocepacia J2315 6931978 YP_002230876.1 CDS BCAL1749 NC_011000.1 1929953 1931143 D putative CoA-transferase 1929953..1931143 Burkholderia cenocepacia J2315 6933732 YP_002230877.1 CDS BCAL1750 NC_011000.1 1931165 1932127 D hypothetical protein 1931165..1932127 Burkholderia cenocepacia J2315 6931979 YP_002230878.1 CDS BCAL1751 NC_011000.1 1932162 1932545 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1932162..1932545 Burkholderia cenocepacia J2315 6931980 YP_002230879.1 CDS BCAL1752 NC_011000.1 1932749 1933576 D hypothetical protein 1932749..1933576 Burkholderia cenocepacia J2315 6931981 YP_002230880.1 CDS BCAL1753 NC_011000.1 1933609 1934565 D LysR family regulatory protein 1933609..1934565 Burkholderia cenocepacia J2315 6931982 YP_002230881.1 CDS BCAL1754 NC_011000.1 1935016 1936347 R major facilitator superfamily protein complement(1935016..1936347) Burkholderia cenocepacia J2315 6931983 YP_002230882.1 CDS BCAL1755 NC_011000.1 1937298 1938167 D hypothetical protein 1937298..1938167 Burkholderia cenocepacia J2315 6931984 YP_002230883.1 CDS BCAL1756 NC_011000.1 1938209 1939342 D putative metal dependent phosphohydrolase 1938209..1939342 Burkholderia cenocepacia J2315 6931985 YP_002230884.1 CDS BCAL1757 NC_011000.1 1939405 1940088 R hypothetical protein complement(1939405..1940088) Burkholderia cenocepacia J2315 6931986 YP_002230885.1 CDS BCAL1758 NC_011000.1 1940101 1940739 R hypothetical protein complement(1940101..1940739) Burkholderia cenocepacia J2315 6931987 YP_002230886.1 CDS BCAL1759 NC_011000.1 1940920 1942023 D 2-nitropropane dioxygenase family protein 1940920..1942023 Burkholderia cenocepacia J2315 6931988 YP_002230887.1 CDS BCAL1760 NC_011000.1 1942139 1942510 D hypothetical protein 1942139..1942510 Burkholderia cenocepacia J2315 6931989 YP_002230888.1 CDS BCAL1761 NC_011000.1 1942746 1943201 D MarR family regulatory protein 1942746..1943201 Burkholderia cenocepacia J2315 6931990 YP_002230889.1 CDS BCAL1762 NC_011000.1 1943254 1943970 R acetyltransferase (GNAT) family protein complement(1943254..1943970) Burkholderia cenocepacia J2315 6931991 YP_002230890.1 CDS BCAL1763 NC_011000.1 1944139 1944465 R hypothetical protein complement(1944139..1944465) Burkholderia cenocepacia J2315 6931992 YP_002230891.1 CDS BCAL1764 NC_011000.1 1944542 1944871 R hypothetical protein complement(1944542..1944871) Burkholderia cenocepacia J2315 6931993 YP_002230892.1 CDS BCAL1765 NC_011000.1 1944932 1945258 R hypothetical protein complement(1944932..1945258) Burkholderia cenocepacia J2315 6931994 YP_002230893.1 CDS BCAL1766 NC_011000.1 1945327 1945746 R OsmC-like protein complement(1945327..1945746) Burkholderia cenocepacia J2315 6931995 YP_002230894.1 CDS BCAL1767 NC_011000.1 1946144 1947463 D putative alpha-ketoglutarate permease 1946144..1947463 Burkholderia cenocepacia J2315 6931996 YP_002230895.1 CDS BCAL1768 NC_011000.1 1947520 1948407 R LysR family regulatory protein complement(1947520..1948407) Burkholderia cenocepacia J2315 6931997 YP_002230896.1 CDS mdlB NC_011000.1 1948577 1949743 D putative L(+)-mandelate dehydrogenase 1948577..1949743 Burkholderia cenocepacia J2315 6931998 YP_002230897.1 CDS BCAL1770 NC_011000.1 1950198 1951424 R family S9 unassigned serine peptidase. N-terminus is similar to Pseudomonas sp. (strain p51) carboxymethylenebutenolidase TcbE UniProt:P27100 (EMBL:M57629 (238 aa) fasta scores: E()=2.2e-26, 40.271% id in 221 aa; dienelactone hydrolase family protein complement(1950198..1951424) Burkholderia cenocepacia J2315 6933807 YP_002230898.1 CDS BCAL1771 NC_011000.1 1951475 1952323 R short chain dehydrogenase complement(1951475..1952323) Burkholderia cenocepacia J2315 6931999 YP_002230899.1 CDS BCAL1772 NC_011000.1 1952320 1952958 R isochorismatase family protein complement(1952320..1952958) Burkholderia cenocepacia J2315 6932000 YP_002230900.1 CDS BCAL1773 NC_011000.1 1952955 1953491 R small subunit of terminal oxygenase component complement(1952955..1953491) Burkholderia cenocepacia J2315 6932001 YP_002230901.1 CDS BCAL1774 NC_011000.1 1953491 1954828 R terminal oxygenase large subunit complement(1953491..1954828) Burkholderia cenocepacia J2315 6932002 YP_002230902.1 CDS BCAL1775 NC_011000.1 1954851 1955810 R reductase component of dioxygenase system complement(1954851..1955810) Burkholderia cenocepacia J2315 6932003 YP_002230903.1 CDS andR NC_011000.1 1955913 1956896 R AraC family regulatory protein complement(1955913..1956896) Burkholderia cenocepacia J2315 6932004 YP_002230904.1 CDS BCAL1777 NC_011000.1 1957571 1960291 R TonB-dependent receptor complement(1957571..1960291) Burkholderia cenocepacia J2315 6933297 YP_002230905.1 CDS BCAL1777a NC_011000.1 1960570 1960770 D hypothetical protein 1960570..1960770 Burkholderia cenocepacia J2315 6932005 YP_002230906.1 CDS mexD NC_011000.1 1961119 1964292 R RND family efflux system transporter protein complement(1961119..1964292) Burkholderia cenocepacia J2315 6932006 YP_002230907.1 CDS BCAL1779 NC_011000.1 1964405 1966027 R ABC transporter ATP-binding protein complement(1964405..1966027) Burkholderia cenocepacia J2315 6933818 YP_002230908.1 CDS BCAL1780 NC_011000.1 1966039 1967142 R putative binding-protein component of ABC transporter complement(1966039..1967142) Burkholderia cenocepacia J2315 6932007 YP_002230909.1 CDS BCAL1781 NC_011000.1 1967096 1968148 R putative permease of ABC transporter protein complement(1967096..1968148) Burkholderia cenocepacia J2315 6932008 YP_002230910.1 CDS BCAL1782 NC_011000.1 1968161 1970035 R putative binding protein component of ABC transporter complement(1968161..1970035) Burkholderia cenocepacia J2315 6932009 YP_002230911.1 CDS BCAL1785 NC_011000.1 1973453 1974175 R putative DNA-binding protein complement(1973453..1974175) Burkholderia cenocepacia J2315 6932011 YP_002230912.1 CDS BCAL1786 NC_011000.1 1974331 1975521 R putative lipoprotein complement(1974331..1975521) Burkholderia cenocepacia J2315 6932012 YP_002230913.1 CDS BCAL1787 NC_011000.1 1975537 1975968 R putative iron-uptake protein complement(1975537..1975968) Burkholderia cenocepacia J2315 6932013 YP_002230914.1 CDS BCAL1788 NC_011000.1 1976067 1976489 R putative iron-transport protein complement(1976067..1976489) Burkholderia cenocepacia J2315 6932014 YP_002230915.1 CDS BCAL1789 NC_011000.1 1976510 1977373 R putative iron-transport protein complement(1976510..1977373) Burkholderia cenocepacia J2315 6932015 YP_002230916.1 CDS BCAL1790 NC_011000.1 1977502 1978209 R putative iron-transport protein complement(1977502..1978209) Burkholderia cenocepacia J2315 6932016 YP_002230917.1 CDS BCAL1791 NC_011000.1 1979055 1979543 R hypothetical protein complement(1979055..1979543) Burkholderia cenocepacia J2315 6932017 YP_002230918.1 CDS BCAL1792 NC_011000.1 1980001 1980294 D unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 1980001..1980294 Burkholderia cenocepacia J2315 6932018 YP_002230919.1 CDS BCAL1793 NC_011000.1 1980302 1981279 R putative metal ion transport protein complement(1980302..1981279) Burkholderia cenocepacia J2315 6932019 YP_002230920.1 CDS BCAL1794 NC_011000.1 1981480 1981626 D hypothetical protein 1981480..1981626 Burkholderia cenocepacia J2315 6932020 YP_002230921.1 CDS BCAL1795 NC_011000.1 1981623 1982240 D putative ATPase 1981623..1982240 Burkholderia cenocepacia J2315 6932021 YP_002230922.1 CDS BCAL1796 NC_011000.1 1982358 1983458 R Weakly similar to the N-terminal region of Magnaporthe grisea Saccharopine dehydrogenase LYS3 UniProt:Q9P4R4 (EMBL:AF144424 (450 aa) fasta scores: E()=0.071, 19.597% id in 347 aa; putative saccharopine dehydrogenase complement(1982358..1983458) Burkholderia cenocepacia J2315 6932022 YP_002230923.1 CDS BCAL1797 NC_011000.1 1983956 1984420 R AnsC family regulatory protein complement(1983956..1984420) Burkholderia cenocepacia J2315 6932023 YP_002230924.1 CDS BCAL1798 NC_011000.1 1984671 1985234 D hypothetical protein 1984671..1985234 Burkholderia cenocepacia J2315 6932024 YP_002230925.1 CDS BCAL1799 NC_011000.1 1985370 1985801 D hypothetical protein 1985370..1985801 Burkholderia cenocepacia J2315 6932025 YP_002230926.1 CDS BCAL1800 NC_011000.1 1985835 1986197 R hypothetical protein complement(1985835..1986197) Burkholderia cenocepacia J2315 6932026 YP_002230927.1 CDS BCAL1801 NC_011000.1 1986211 1986999 R hypothetical protein complement(1986211..1986999) Burkholderia cenocepacia J2315 6932027 YP_002230928.1 CDS BCAL1802 NC_011000.1 1987055 1988098 R LacI family regulatory protein complement(1987055..1988098) Burkholderia cenocepacia J2315 6932028 YP_002230929.1 CDS tkrA NC_011000.1 1988431 1989396 R 2-ketogluconate reductase complement(1988431..1989396) Burkholderia cenocepacia J2315 6932029 YP_002230930.1 CDS BCAL1804 NC_011000.1 1989401 1990681 R major facilitator superfamily protein complement(1989401..1990681) Burkholderia cenocepacia J2315 6934188 YP_002230931.1 CDS BCAL1805 NC_011000.1 1990797 1991789 R putative sugar kinase complement(1990797..1991789) Burkholderia cenocepacia J2315 6932030 YP_002230932.1 CDS BCAL1806 NC_011000.1 1991818 1992582 R hypothetical protein complement(1991818..1992582) Burkholderia cenocepacia J2315 6932031 YP_002230933.1 CDS BCAL1807 NC_011000.1 1992744 1993637 R LysR family regulatory protein complement(1992744..1993637) Burkholderia cenocepacia J2315 6932032 YP_002230934.1 CDS BCAL1808 NC_011000.1 1993750 1994826 D hypothetical protein 1993750..1994826 Burkholderia cenocepacia J2315 6932033 YP_002230935.1 CDS BCAL1809 NC_011000.1 1994894 1996663 D putative voltage-gated ClC-type chloride channel ClcB 1994894..1996663 Burkholderia cenocepacia J2315 6932034 YP_002230936.1 CDS BCAL1810 NC_011000.1 1996700 1997320 R TetR family regulatory protein complement(1996700..1997320) Burkholderia cenocepacia J2315 6932035 YP_002230937.1 CDS BCAL1811 NC_011000.1 1997510 1998619 D Possible alternative translational start sites; putative efflux system transport protein 1997510..1998619 Burkholderia cenocepacia J2315 6932036 YP_002230938.1 CDS BCAL1812 NC_011000.1 1998616 2001762 D RND family efflux system transporter protein 1998616..2001762 Burkholderia cenocepacia J2315 6932037 YP_002230939.1 CDS BCAL1813 NC_011000.1 2001765 2003330 D multidrug efflux system outer membrane protein 2001765..2003330 Burkholderia cenocepacia J2315 6932038 YP_002230940.1 CDS BCAL1814 NC_011000.1 2003455 2004483 D MerR family regulatory protein 2003455..2004483 Burkholderia cenocepacia J2315 6932039 YP_002230941.1 CDS BCAL1814A NC_011000.1 2004532 2005230 R hypothetical protein complement(2004532..2005230) Burkholderia cenocepacia J2315 6932040 YP_002230942.1 CDS BCAL1815 NC_011000.1 2005205 2005429 R putative transcriptional regulatory protein complement(2005205..2005429) Burkholderia cenocepacia J2315 6932041 YP_002230943.1 CDS BCAL1816 NC_011000.1 2005438 2005998 R hypothetical protein complement(2005438..2005998) Burkholderia cenocepacia J2315 6932042 YP_002230944.1 CDS BCAL1817 NC_011000.1 2006229 2007611 R putative transcriptional regulatory protein complement(2006229..2007611) Burkholderia cenocepacia J2315 6932043 YP_002230945.1 CDS BCAL1818 NC_011000.1 2007865 2008749 D metallo-beta-lactamase superfamily protein 2007865..2008749 Burkholderia cenocepacia J2315 6932044 YP_002230946.1 CDS BCAL1819 NC_011000.1 2008778 2010448 D hypothetical protein 2008778..2010448 Burkholderia cenocepacia J2315 6932045 YP_002230947.1 CDS BCAL1820 NC_011000.1 2010467 2011273 D hypothetical protein 2010467..2011273 Burkholderia cenocepacia J2315 6932046 YP_002230948.1 CDS potI NC_011000.1 2011366 2012187 R putrescine transport system permease complement(2011366..2012187) Burkholderia cenocepacia J2315 6932047 YP_002230949.1 CDS potH NC_011000.1 2012184 2013110 R putrescine transport system permease complement(2012184..2013110) Burkholderia cenocepacia J2315 6933980 YP_002230950.1 CDS potG NC_011000.1 2013107 2014267 R putrescine ABC transporter ATP-binding protein complement(2013107..2014267) Burkholderia cenocepacia J2315 6933978 YP_002230951.1 CDS potF NC_011000.1 2014354 2015448 R putrescine-binding periplasmic protein complement(2014354..2015448) Burkholderia cenocepacia J2315 6933976 YP_002230952.1 CDS BCAL1825 NC_011000.1 2015832 2016071 D hypothetical protein 2015832..2016071 Burkholderia cenocepacia J2315 6933974 YP_002230953.1 CDS BCAL1826 NC_011000.1 2016677 2017342 D hypothetical protein 2016677..2017342 Burkholderia cenocepacia J2315 6932048 YP_002230954.1 CDS BCAL1827 NC_011000.1 2017433 2018194 D member of the periplasmic pilus chaperone family of proteins; putative periplasmic chaperone protein 2017433..2018194 Burkholderia cenocepacia J2315 6932049 YP_002230955.1 CDS BCAL1828 NC_011000.1 2018223 2020667 D putative fimbrial usher protein 2018223..2020667 Burkholderia cenocepacia J2315 6932050 YP_002230956.1 CDS BCAL1829 NC_011000.1 2020728 2021309 R putative outer membrane protein complement(2020728..2021309) Burkholderia cenocepacia J2315 6932051 YP_002230957.1 CDS BCAL1830 NC_011000.1 2021432 2022622 R putative 2-nitropropane dioxygenase complement(2021432..2022622) Burkholderia cenocepacia J2315 6932052 YP_002230958.1 CDS BCAL1831 NC_011000.1 2022746 2024182 R putative betaine aldehyde dehydrogenase complement(2022746..2024182) Burkholderia cenocepacia J2315 6932053 YP_002230959.1 CDS BCAL1832 NC_011000.1 2024467 2024832 D hypothetical protein 2024467..2024832 Burkholderia cenocepacia J2315 6932054 YP_002230960.1 CDS BCAL1833 NC_011000.1 2024978 2025466 R hypothetical protein complement(2024978..2025466) Burkholderia cenocepacia J2315 6932055 YP_002230961.1 CDS BCAL1834 NC_011000.1 2025706 2026269 D hypothetical protein 2025706..2026269 Burkholderia cenocepacia J2315 6932056 YP_002230962.1 CDS BCAL1835 NC_011000.1 2026286 2026882 D putative polysaccharide deacetylase 2026286..2026882 Burkholderia cenocepacia J2315 6932057 YP_002230963.1 CDS BCAL1836 NC_011000.1 2026879 2027727 R hypothetical protein complement(2026879..2027727) Burkholderia cenocepacia J2315 6932058 YP_002230964.1 CDS BCAL1837 NC_011000.1 2027873 2028562 D hypothetical protein 2027873..2028562 Burkholderia cenocepacia J2315 6932059 YP_002230965.1 CDS BCAL1838 NC_011000.1 2028519 2029727 R UDP glycosyltransferase complement(2028519..2029727) Burkholderia cenocepacia J2315 6932060 YP_002230966.1 CDS BCAL1839 NC_011000.1 2029735 2030805 R putative asparagine synthase complement(2029735..2030805) Burkholderia cenocepacia J2315 6932061 YP_002230967.1 CDS BCAL1840 NC_011000.1 2030802 2031680 R hypothetical protein complement(2030802..2031680) Burkholderia cenocepacia J2315 6932062 YP_002230968.1 CDS BCAL1841 NC_011000.1 2031682 2032680 R hypothetical protein complement(2031682..2032680) Burkholderia cenocepacia J2315 6932063 YP_002230969.1 CDS BCAL1842 NC_011000.1 2032681 2033430 R hypothetical protein complement(2032681..2033430) Burkholderia cenocepacia J2315 6932064 YP_002230970.1 CDS BCAL1843 NC_011000.1 2033663 2035255 R ABC transporter ATP-binding protein complement(2033663..2035255) Burkholderia cenocepacia J2315 6932065 YP_002230971.1 CDS BCAL1844 NC_011000.1 2035424 2035876 D hypothetical protein 2035424..2035876 Burkholderia cenocepacia J2315 6932066 YP_002230972.1 CDS BCAL1845 NC_011000.1 2035970 2038282 R hypothetical protein complement(2035970..2038282) Burkholderia cenocepacia J2315 6932067 YP_002230973.1 CDS BCAL1846 NC_011000.1 2038435 2039136 D ABC transporter ATP-binding protein 2038435..2039136 Burkholderia cenocepacia J2315 6932068 YP_002230974.1 CDS BCAL1847 NC_011000.1 2039133 2039936 D hypothetical protein 2039133..2039936 Burkholderia cenocepacia J2315 6932069 YP_002230975.1 CDS BCAL1848 NC_011000.1 2039973 2040446 R hypothetical protein complement(2039973..2040446) Burkholderia cenocepacia J2315 6932070 YP_002230976.1 CDS BCAL1849 NC_011000.1 2040670 2041326 R hypothetical protein complement(2040670..2041326) Burkholderia cenocepacia J2315 6932071 YP_002230977.1 CDS BCAL1850 NC_011000.1 2041380 2042396 R putative dehydrogenase complement(2041380..2042396) Burkholderia cenocepacia J2315 6932072 YP_002230978.1 CDS BCAL1851 NC_011000.1 2042521 2043459 D LysR family regulatory protein 2042521..2043459 Burkholderia cenocepacia J2315 6932073 YP_002230979.1 CDS BCAL1852 NC_011000.1 2043626 2044471 D putative phosphoserine phosphatase 2043626..2044471 Burkholderia cenocepacia J2315 6932074 YP_002230980.1 CDS BCAL1853 NC_011000.1 2044559 2045740 R catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase complement(2044559..2045740) Burkholderia cenocepacia J2315 6932075 YP_002230981.1 CDS BCAL1854 NC_011000.1 2045854 2046393 R hypothetical protein complement(2045854..2046393) Burkholderia cenocepacia J2315 6932076 YP_002230982.1 CDS BCAL1855 NC_011000.1 2046512 2047438 R putative fructokinase-like protein complement(2046512..2047438) Burkholderia cenocepacia J2315 6932077 YP_002230983.1 CDS rimO NC_011000.1 2047442 2048803 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase complement(2047442..2048803) Burkholderia cenocepacia J2315 6932078 YP_002230984.1 CDS BCAL1857 NC_011000.1 2049368 2049628 D hypothetical protein 2049368..2049628 Burkholderia cenocepacia J2315 6932079 YP_002230985.1 CDS BCAL1858 NC_011000.1 2049704 2050027 D Possible alternative translational start site after codon 23; hypothetical protein 2049704..2050027 Burkholderia cenocepacia J2315 6932080 YP_002230986.1 CDS BCAL1859 NC_011000.1 2050112 2050645 R hypothetical protein complement(2050112..2050645) Burkholderia cenocepacia J2315 6932081 YP_002230987.1 CDS pbhF NC_011000.1 2051302 2051868 R putative polyhydroxyalkanoate (PHA) synthesis regulatory protein complement(2051302..2051868) Burkholderia cenocepacia J2315 6932082 YP_002230988.1 CDS phbB NC_011000.1 2051988 2052728 R catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; acetyacetyl-CoA reductase complement(2051988..2052728) Burkholderia cenocepacia J2315 6933931 YP_002230989.1 CDS phbA NC_011000.1 2052850 2054031 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(2052850..2054031) Burkholderia cenocepacia J2315 6933954 YP_002230990.1 CDS phbC NC_011000.1 2054131 2055996 R poly-beta-hydroxybutyrate polymerase complement(2054131..2055996) Burkholderia cenocepacia J2315 6933952 YP_002230991.1 CDS BCAL1864 NC_011000.1 2056357 2057196 R hypothetical protein complement(2056357..2057196) Burkholderia cenocepacia J2315 6933955 YP_002230992.1 CDS BCAL1865 NC_011000.1 2057203 2058288 R ribosomal large subunit pseudouridine synthase D complement(2057203..2058288) Burkholderia cenocepacia J2315 6932083 YP_002230993.1 CDS BCAL1866 NC_011000.1 2058456 2059280 D putative lipoprotein 2058456..2059280 Burkholderia cenocepacia J2315 6932084 YP_002230994.1 CDS BCAL1867 NC_011000.1 2059403 2061652 R putative ATP-dependent DNA helicase-related protein complement(2059403..2061652) Burkholderia cenocepacia J2315 6932085 YP_002230995.1 CDS BCAL1868 NC_011000.1 2061708 2061923 R hypothetical protein complement(2061708..2061923) Burkholderia cenocepacia J2315 6932086 YP_002230996.1 CDS BCAL1869 NC_011000.1 2062000 2062674 R hypothetical protein complement(2062000..2062674) Burkholderia cenocepacia J2315 6932087 YP_002230997.1 CDS tex NC_011000.1 2062917 2065241 D putative transcription accessory protein 2062917..2065241 Burkholderia cenocepacia J2315 6932088 YP_002230998.1 CDS kup NC_011000.1 2065350 2067203 R kup system potassium uptake protein complement(2065350..2067203) Burkholderia cenocepacia J2315 6934176 YP_002230999.1 CDS BCAL1872 NC_011000.1 2067541 2068101 R putative nucleotide phosphoribosyltransferase complement(2067541..2068101) Burkholderia cenocepacia J2315 6933777 YP_002231000.1 CDS purA NC_011000.1 2068145 2069491 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(2068145..2069491) Burkholderia cenocepacia J2315 6932089 YP_002231001.1 CDS hisZ NC_011000.1 2069605 2070753 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(2069605..2070753) Burkholderia cenocepacia J2315 6933998 YP_002231002.1 CDS BCAL1875 NC_011000.1 2070867 2071058 R hypothetical protein complement(2070867..2071058) Burkholderia cenocepacia J2315 6932090 YP_002231003.1 CDS hflC NC_011000.1 2071095 2071994 R protein HflC complement(2071095..2071994) Burkholderia cenocepacia J2315 6932091 YP_002231004.1 CDS hflK NC_011000.1 2072010 2073356 R protein HflK complement(2072010..2073356) Burkholderia cenocepacia J2315 6933704 YP_002231005.1 CDS hflX NC_011000.1 2073404 2074591 R putative GTP-binding protein complement(2073404..2074591) Burkholderia cenocepacia J2315 6933705 YP_002231006.1 CDS hfq NC_011000.1 2074649 2074888 R Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq complement(2074649..2074888) Burkholderia cenocepacia J2315 6933706 YP_002231007.1 CDS engA NC_011000.1 2075030 2076367 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(2075030..2076367) Burkholderia cenocepacia J2315 6933707 YP_002231008.1 CDS BCAL1881 NC_011000.1 2076614 2077759 R putative lipoprotein complement(2076614..2077759) Burkholderia cenocepacia J2315 6933532 YP_002231009.1 CDS BCAL1882 NC_011000.1 2077801 2078430 R hypothetical protein complement(2077801..2078430) Burkholderia cenocepacia J2315 6932092 YP_002231010.1 CDS hisS NC_011000.1 2078486 2079826 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(2078486..2079826) Burkholderia cenocepacia J2315 6932093 YP_002231011.1 CDS ispG NC_011000.1 2079847 2081151 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2079847..2081151) Burkholderia cenocepacia J2315 6933724 YP_002231012.1 CDS BCAL1885 NC_011000.1 2081264 2082280 R hypothetical protein complement(2081264..2082280) Burkholderia cenocepacia J2315 6932094 YP_002231013.1 CDS BCAL1886 NC_011000.1 2082444 2083583 R radical SAM superfamily protein complement(2082444..2083583) Burkholderia cenocepacia J2315 6932095 YP_002231014.1 CDS ndk NC_011000.1 2083639 2084064 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(2083639..2084064) Burkholderia cenocepacia J2315 6932096 YP_002231015.1 CDS BCAL1888 NC_011000.1 2084299 2085012 D hypothetical protein 2084299..2085012 Burkholderia cenocepacia J2315 6933873 YP_002231016.1 CDS rumA NC_011000.1 2085076 2086473 R in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase complement(2085076..2086473) Burkholderia cenocepacia J2315 6932097 YP_002231017.1 CDS BCAL1890 NC_011000.1 2086704 2087558 D endonuclease/exonuclease/phosphatase family protein 2086704..2087558 Burkholderia cenocepacia J2315 6932098 YP_002231018.1 CDS BCAL1891 NC_011000.1 2087589 2088365 R hypothetical protein complement(2087589..2088365) Burkholderia cenocepacia J2315 6932099 YP_002231019.1 CDS rpoS NC_011000.1 2088369 2089457 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS complement(2088369..2089457) Burkholderia cenocepacia J2315 6932100 YP_002231020.1 CDS BCAL1893 NC_011000.1 2089469 2090368 R family M23 peptidase complement(2089469..2090368) Burkholderia cenocepacia J2315 6934098 YP_002231021.1 CDS BCAL1894 NC_011000.1 2090365 2091297 R putative L-isoaspartate O-methyltransferase complement(2090365..2091297) Burkholderia cenocepacia J2315 6932101 YP_002231022.1 CDS surE NC_011000.1 2091294 2092055 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(2091294..2092055) Burkholderia cenocepacia J2315 6932102 YP_002231023.1 CDS BCAL1896 NC_011000.1 2092277 2093482 R putative transferase complement(2092277..2093482) Burkholderia cenocepacia J2315 6932103 YP_002231024.1 CDS recR NC_011000.1 2093531 2094127 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(2093531..2094127) Burkholderia cenocepacia J2315 6932104 YP_002231025.1 CDS BCAL1898 NC_011000.1 2094159 2094485 R hypothetical protein complement(2094159..2094485) Burkholderia cenocepacia J2315 6934030 YP_002231026.1 CDS dnaX NC_011000.1 2094581 2096944 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau complement(2094581..2096944) Burkholderia cenocepacia J2315 6932105 YP_002231027.1 CDS trxA NC_011000.1 2097562 2097888 D thioredoxin 2097562..2097888 Burkholderia cenocepacia J2315 6933366 YP_002231028.1 CDS BCAL1900A NC_011000.1 2097908 2098018 D hypothetical protein 2097908..2098018 Burkholderia cenocepacia J2315 6934205 YP_002231029.1 CDS rho NC_011000.1 2098084 2099346 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2098084..2099346 Burkholderia cenocepacia J2315 6932106 YP_002231030.1 CDS BCAL1902 NC_011000.1 2099503 2099976 D MerR family regulatory protein 2099503..2099976 Burkholderia cenocepacia J2315 6934036 YP_002231031.1 CDS BCAL1903 NC_011000.1 2100144 2101529 D hypothetical protein 2100144..2101529 Burkholderia cenocepacia J2315 6932107 YP_002231032.1 CDS BCAL1904 NC_011000.1 2101568 2102401 D hypothetical protein 2101568..2102401 Burkholderia cenocepacia J2315 6932108 YP_002231033.1 CDS rpmE2 NC_011000.1 2102558 2102818 D RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B 2102558..2102818 Burkholderia cenocepacia J2315 6932109 YP_002231034.1 CDS BCAL1906 NC_011000.1 2102949 2104781 D hypothetical protein 2102949..2104781 Burkholderia cenocepacia J2315 6934085 YP_002231035.1 CDS BCAL1907 NC_011000.1 2104784 2106139 D putative multidrug resistance protein 2104784..2106139 Burkholderia cenocepacia J2315 6932110 YP_002231036.1 CDS lipA NC_011000.1 2106144 2107109 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(2106144..2107109) Burkholderia cenocepacia J2315 6932111 YP_002231037.1 CDS acoC NC_011000.1 2107112 2108227 R family S33 serine peptidase; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(2107112..2108227) Burkholderia cenocepacia J2315 6933791 YP_002231038.1 CDS acoB NC_011000.1 2108232 2109236 R acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta complement(2108232..2109236) Burkholderia cenocepacia J2315 6933278 YP_002231039.1 CDS acoA NC_011000.1 2109291 2110319 R acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha complement(2109291..2110319) Burkholderia cenocepacia J2315 6933277 YP_002231040.1 CDS budC NC_011000.1 2110352 2111128 R putative acetoin(diacetyl) reductase complement(2110352..2111128) Burkholderia cenocepacia J2315 6933276 YP_002231041.1 CDS acoX NC_011000.1 2111188 2112282 R putative acetoin catabolism protein complement(2111188..2112282) Burkholderia cenocepacia J2315 6933420 YP_002231042.1 CDS acoR NC_011000.1 2112783 2114702 D acetoin catabolism regulatory protein 2112783..2114702 Burkholderia cenocepacia J2315 6933282 YP_002231043.1 CDS BCAL1915 NC_011000.1 2114722 2115156 R putative decarboxylase complement(2114722..2115156) Burkholderia cenocepacia J2315 6933281 YP_002231044.1 CDS BCAL1916 NC_011000.1 2115140 2115601 R MerR family regulatory protein complement(2115140..2115601) Burkholderia cenocepacia J2315 6932112 YP_002231045.1 CDS BCAL1917 NC_011000.1 2115847 2116497 D hypothetical protein 2115847..2116497 Burkholderia cenocepacia J2315 6932113 YP_002231046.1 CDS BCAL1918 NC_011000.1 2116586 2117017 D hypothetical protein 2116586..2117017 Burkholderia cenocepacia J2315 6932114 YP_002231047.1 CDS clpB NC_011000.1 2117147 2119744 R ClpB heat-shock protein complement(2117147..2119744) Burkholderia cenocepacia J2315 6932115 YP_002231048.1 CDS BCAL1920 NC_011000.1 2119890 2120408 R putative DNA-binding protein complement(2119890..2120408) Burkholderia cenocepacia J2315 6933438 YP_002231049.1 CDS BCAL1921 NC_011000.1 2120767 2121222 D hypothetical protein 2120767..2121222 Burkholderia cenocepacia J2315 6932116 YP_002231050.1 CDS moaE NC_011000.1 2121285 2121761 R molybdopterin converting factor subunit 2 complement(2121285..2121761) Burkholderia cenocepacia J2315 6932117 YP_002231051.1 CDS moaD NC_011000.1 2121772 2122029 R molybdopterin converting factor subunit 1 complement(2121772..2122029) Burkholderia cenocepacia J2315 6933831 YP_002231052.1 CDS moeA3 NC_011000.1 2122049 2123296 R molybdopterin biosynthesis protein MoeA 3 complement(2122049..2123296) Burkholderia cenocepacia J2315 6933830 YP_002231053.1 CDS thrC NC_011000.1 2123544 2124995 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(2123544..2124995) Burkholderia cenocepacia J2315 6933836 YP_002231054.1 CDS hom NC_011000.1 2125008 2126336 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(2125008..2126336) Burkholderia cenocepacia J2315 6934185 YP_002231055.1 CDS BCAL1927 NC_011000.1 2126390 2127628 R broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT complement(2126390..2127628) Burkholderia cenocepacia J2315 6933729 YP_002231056.1 CDS BCAL1928 NC_011000.1 2127945 2128319 D hypothetical protein 2127945..2128319 Burkholderia cenocepacia J2315 6932118 YP_002231057.1 CDS BCAL1929 NC_011000.1 2128443 2130119 D putative undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosy transferase 2128443..2130119 Burkholderia cenocepacia J2315 6932119 YP_002231058.1 CDS BCAL1930 NC_011000.1 2130133 2130504 D SMR family transporter protein 2130133..2130504 Burkholderia cenocepacia J2315 6932120 YP_002231059.1 CDS arnB NC_011000.1 2130635 2131786 D putative UDP-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferas 2130635..2131786 Burkholderia cenocepacia J2315 6932121 YP_002231060.1 CDS BCAL1932 NC_011000.1 2131793 2132830 D putative undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase 2131793..2132830 Burkholderia cenocepacia J2315 6933310 YP_002231061.1 CDS BCAL1933 NC_011000.1 2132827 2133774 D Similar to the N-terminal region of Escherichia coli bifunctional polymyxin resistance arnA protein UniProt:P77398 (EMBL:AP009048 (660 aa) fasta scores: E()=1.3e-41, 42.173% id in 313 aa; putative formyltransferase 2132827..2133774 Burkholderia cenocepacia J2315 6932122 YP_002231062.1 CDS BCAL1934 NC_011000.1 2133771 2134826 D Similar to the C-terminal region of Escherichia coli bifunctional polymyxin resistance arnA protein UniProt:P77398 (EMBL:AP009048 (660 aa) fasta scores: E()=4.5e-68, 56.250% id in 336 aa; NAD-dependent epimerase/dehydratase family protein 2133771..2134826 Burkholderia cenocepacia J2315 6932123 YP_002231063.1 CDS BCAL1935 NC_011000.1 2134840 2135736 D polysaccharide deacetylase 2134840..2135736 Burkholderia cenocepacia J2315 6932124 YP_002231064.1 CDS BCAL1936 NC_011000.1 2135847 2136308 D AhpC/TSA family protein 2135847..2136308 Burkholderia cenocepacia J2315 6932125 YP_002231065.1 CDS BCAL1937 NC_011000.1 2136797 2138446 D putative phosphorous metabolism-related protein 2136797..2138446 Burkholderia cenocepacia J2315 6932126 YP_002231066.1 CDS BCAL1938 NC_011000.1 2138683 2139768 D family C40 cysteine peptidase 2138683..2139768 Burkholderia cenocepacia J2315 6932127 YP_002231067.1 CDS BCAL1939 NC_011000.1 2139918 2140928 R putative integral membrane transport protein complement(2139918..2140928) Burkholderia cenocepacia J2315 6932128 YP_002231068.1 CDS BCAL1940 NC_011000.1 2140939 2141565 R hypothetical protein complement(2140939..2141565) Burkholderia cenocepacia J2315 6932129 YP_002231069.1 CDS dnaB NC_011000.1 2141704 2143086 R unwinds double stranded DNA; replicative DNA helicase complement(2141704..2143086) Burkholderia cenocepacia J2315 6932130 YP_002231070.1 CDS rplI NC_011000.1 2143227 2143679 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(2143227..2143679) Burkholderia cenocepacia J2315 6933505 YP_002231071.1 CDS rpsR NC_011000.1 2143707 2143982 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(2143707..2143982) Burkholderia cenocepacia J2315 6934065 YP_002231072.1 CDS BCAL1944 NC_011000.1 2143987 2144286 R putative primosomal replication protein complement(2143987..2144286) Burkholderia cenocepacia J2315 6934118 YP_002231073.1 CDS rpsF NC_011000.1 2144327 2144701 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(2144327..2144701) Burkholderia cenocepacia J2315 6932131 YP_002231074.1 CDS BCAL1946 NC_011000.1 2144932 2145828 R hypothetical protein complement(2144932..2145828) Burkholderia cenocepacia J2315 6934105 YP_002231075.1 CDS BCAL1947 NC_011000.1 2145818 2146459 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(2145818..2146459) Burkholderia cenocepacia J2315 6932132 YP_002231076.1 CDS BCAL1948 NC_011000.1 2146627 2147538 R LysR family regulatory protein complement(2146627..2147538) Burkholderia cenocepacia J2315 6932133 YP_002231077.1 CDS gcl NC_011000.1 2147710 2149485 D catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 2147710..2149485 Burkholderia cenocepacia J2315 6932134 YP_002231078.1 CDS hyi NC_011000.1 2149529 2150338 D hydroxypyruvate isomerase 2149529..2150338 Burkholderia cenocepacia J2315 6933623 YP_002231079.1 CDS glxR NC_011000.1 2150380 2151273 D 2-hydroxy-3-oxopropionate reductase 2150380..2151273 Burkholderia cenocepacia J2315 6933742 YP_002231080.1 CDS BCAL1952 NC_011000.1 2151733 2152203 D LysM domain/BON superfamily protein 2151733..2152203 Burkholderia cenocepacia J2315 6933658 YP_002231081.1 CDS ansB NC_011000.1 2152295 2153317 R L-asparaginase II complement(2152295..2153317) Burkholderia cenocepacia J2315 6932135 YP_002231082.1 CDS BCAL1954 NC_011000.1 2153589 2153879 D hypothetical protein 2153589..2153879 Burkholderia cenocepacia J2315 6933298 YP_002231083.1 CDS BCAL1955 NC_011000.1 2154139 2154588 D hypothetical protein 2154139..2154588 Burkholderia cenocepacia J2315 6932136 YP_002231084.1 CDS BCAL1956 NC_011000.1 2154838 2155425 D putative lipoprotein 2154838..2155425 Burkholderia cenocepacia J2315 6932137 YP_002231085.1 CDS BCAL1957 NC_011000.1 2155556 2156620 R putative sugar transferase complement(2155556..2156620) Burkholderia cenocepacia J2315 6932138 YP_002231086.1 CDS BCAL1958 NC_011000.1 2156905 2158080 R hypothetical protein complement(2156905..2158080) Burkholderia cenocepacia J2315 6932139 YP_002231087.1 CDS BCAL1959 NC_011000.1 2158124 2159296 R mechanosensitive ion channel protein complement(2158124..2159296) Burkholderia cenocepacia J2315 6932140 YP_002231088.1 CDS BCAL1960 NC_011000.1 2159386 2159742 R hypothetical protein complement(2159386..2159742) Burkholderia cenocepacia J2315 6932141 YP_002231089.1 CDS BCAL1961 NC_011000.1 2159861 2160571 R hypothetical protein complement(2159861..2160571) Burkholderia cenocepacia J2315 6932142 YP_002231090.1 CDS BCAL1962 NC_011000.1 2160615 2161394 R putative deoxyribonuclease complement(2160615..2161394) Burkholderia cenocepacia J2315 6932143 YP_002231091.1 CDS BCAL1963 NC_011000.1 2161536 2162564 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(2161536..2162564) Burkholderia cenocepacia J2315 6932144 YP_002231092.1 CDS tmk NC_011000.1 2162583 2163203 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(2162583..2163203) Burkholderia cenocepacia J2315 6932145 YP_002231093.1 CDS BCAL1965 NC_011000.1 2163203 2164222 R putative lipoprotein complement(2163203..2164222) Burkholderia cenocepacia J2315 6932146 YP_002231094.1 CDS BCAL1966 NC_011000.1 2164300 2165334 D tRNA-modifying protein YgfZ 2164300..2165334 Burkholderia cenocepacia J2315 6932147 YP_002231095.1 CDS BCAL1967 NC_011000.1 2165411 2166256 D hypothetical protein 2165411..2166256 Burkholderia cenocepacia J2315 6932148 YP_002231096.1 CDS BCAL1968 NC_011000.1 2166273 2166698 R putative acetyltransferase complement(2166273..2166698) Burkholderia cenocepacia J2315 6932149 YP_002231097.1 CDS BCAL1969 NC_011000.1 2166760 2167827 R family S9 unassigned serine peptidase. Possible alternative translational start sites; putative lipase complement(2166760..2167827) Burkholderia cenocepacia J2315 6932150 YP_002231098.1 CDS BCAL1970 NC_011000.1 2167893 2168372 R thioesterase superfamily protein complement(2167893..2168372) Burkholderia cenocepacia J2315 6932151 YP_002231099.1 CDS BCAL1971 NC_011000.1 2168369 2168683 R hypothetical protein complement(2168369..2168683) Burkholderia cenocepacia J2315 6932152 YP_002231100.1 CDS BCAL1972 NC_011000.1 2169244 2169987 R hypothetical protein complement(2169244..2169987) Burkholderia cenocepacia J2315 6932153 YP_002231101.1 CDS BCAL1973 NC_011000.1 2170111 2170506 R endoribonuclease L-PSP family protein complement(2170111..2170506) Burkholderia cenocepacia J2315 6932154 YP_002231102.1 CDS BCAL1974 NC_011000.1 2171210 2173351 D putative lipoprotein 2171210..2173351 Burkholderia cenocepacia J2315 6932155 YP_002231103.1 CDS BCAL1975 NC_011000.1 2173443 2174843 R putative diguanylate cyclase complement(2173443..2174843) Burkholderia cenocepacia J2315 6932156 YP_002231104.1 CDS BCAL1977 NC_011000.1 2175106 2176284 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(2175106..2176284) Burkholderia cenocepacia J2315 6932157 YP_002231105.1 CDS BCAL1978 NC_011000.1 2176335 2176967 R putative pyrazinamidase/nicotinamidase complement(2176335..2176967) Burkholderia cenocepacia J2315 6932158 YP_002231106.1 CDS BCAL1979 NC_011000.1 2177012 2179114 R possibly trifunctional; putative fatty acid degradation protein complement(2177012..2179114) Burkholderia cenocepacia J2315 6932159 YP_002231107.1 CDS BCAL1980 NC_011000.1 2179354 2180997 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(2179354..2180997) Burkholderia cenocepacia J2315 6932160 YP_002231108.1 CDS BCAL1981 NC_011000.1 2181176 2182744 D hypothetical protein 2181176..2182744 Burkholderia cenocepacia J2315 6932161 YP_002231109.1 CDS msrB NC_011000.1 2182789 2183220 D peptide methionine sulfoxide reductase 2182789..2183220 Burkholderia cenocepacia J2315 6932162 YP_002231110.1 CDS BCAL1983 NC_011000.1 2183350 2183880 D Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2183350..2183880 Burkholderia cenocepacia J2315 6933852 YP_002231111.1 CDS BCAL1984 NC_011000.1 2183882 2184190 D BolA-like protein 2183882..2184190 Burkholderia cenocepacia J2315 6932163 YP_002231112.1 CDS BCAL1985 NC_011000.1 2184209 2184991 D putative exported isomerase 2184209..2184991 Burkholderia cenocepacia J2315 6932164 YP_002231113.1 CDS BCAL1986 NC_011000.1 2185164 2185706 R putative acetyltransferase complement(2185164..2185706) Burkholderia cenocepacia J2315 6932165 YP_002231114.1 CDS purL NC_011000.1 2185715 2189779 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase complement(2185715..2189779) Burkholderia cenocepacia J2315 6932166 YP_002231115.1 CDS BCAL1988 NC_011000.1 2190108 2191409 D putative D-amino acid dehydrogenase small subunit 2190108..2191409 Burkholderia cenocepacia J2315 6934005 YP_002231116.1 CDS BCAL1989 NC_011000.1 2191462 2193006 D putative carbohydrate kinase 2191462..2193006 Burkholderia cenocepacia J2315 6932167 YP_002231117.1 CDS pgi NC_011000.1 2193118 2194740 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 2193118..2194740 Burkholderia cenocepacia J2315 6932168 YP_002231118.1 CDS BCAL1991 NC_011000.1 2194809 2195522 R ABC transporter ATP-binding protein complement(2194809..2195522) Burkholderia cenocepacia J2315 6933945 YP_002231119.1 CDS BCAL1992 NC_011000.1 2195521 2196189 D putative acyl-CoA thioesterase 2195521..2196189 Burkholderia cenocepacia J2315 6932169 YP_002231120.1 CDS BCAL1993 NC_011000.1 2196264 2198198 R putative peptidyl-prolyl cis-trans isomerase complement(2196264..2198198) Burkholderia cenocepacia J2315 6932170 YP_002231121.1 CDS lon NC_011000.1 2198983 2201406 R family S16 serine peptidase; ATP-dependent protease La complement(2198983..2201406) Burkholderia cenocepacia J2315 6933368 YP_002231122.1 CDS clpX NC_011000.1 2201604 2202875 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(2201604..2202875) Burkholderia cenocepacia J2315 6933795 YP_002231123.1 CDS clpP NC_011000.1 2203039 2203692 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(2203039..2203692) Burkholderia cenocepacia J2315 6933441 YP_002231124.1 CDS tig NC_011000.1 2203833 2205179 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(2203833..2205179) Burkholderia cenocepacia J2315 6933439 YP_002231125.1 CDS BCAL1998 NC_011000.1 2205571 2206716 D putative kinase 2205571..2206716 Burkholderia cenocepacia J2315 6934187 YP_002231126.1 CDS BCAL1999 NC_011000.1 2206779 2207228 D MarR family regulatory protein 2206779..2207228 Burkholderia cenocepacia J2315 6932172 YP_002231127.1 CDS BCAL2000 NC_011000.1 2207419 2208417 R ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase complement(2207419..2208417) Burkholderia cenocepacia J2315 6932173 YP_002231128.1 CDS BCAL2001 NC_011000.1 2208525 2209670 R LuxR superfamily regulatory protein complement(2208525..2209670) Burkholderia cenocepacia J2315 6932174 YP_002231129.1 CDS BCAL2002 NC_011000.1 2209973 2211019 D putative porin signal peptide protein 2209973..2211019 Burkholderia cenocepacia J2315 6932175 YP_002231130.1 CDS BCAL2003 NC_011000.1 2211041 2212249 D major facilitator superfamily protein 2211041..2212249 Burkholderia cenocepacia J2315 6932176 YP_002231131.1 CDS BCAL2004 NC_011000.1 2212246 2213373 D histone deacetylase family protein 2212246..2213373 Burkholderia cenocepacia J2315 6932177 YP_002231132.1 CDS BCAL2005 NC_011000.1 2213485 2213715 D hypothetical protein 2213485..2213715 Burkholderia cenocepacia J2315 6932178 YP_002231133.1 CDS BCAL2006 NC_011000.1 2213908 2214159 D hypothetical protein 2213908..2214159 Burkholderia cenocepacia J2315 6932179 YP_002231134.1 CDS BCAL2007 NC_011000.1 2214561 2215463 D squalene/phytoene synthase family protein 2214561..2215463 Burkholderia cenocepacia J2315 6933369 YP_002231135.1 CDS BCAL2008 NC_011000.1 2215474 2216694 R hypothetical protein complement(2215474..2216694) Burkholderia cenocepacia J2315 6932181 YP_002231136.1 CDS BCAL2009 NC_011000.1 2216762 2218264 R hypothetical protein complement(2216762..2218264) Burkholderia cenocepacia J2315 6932182 YP_002231137.1 CDS BCAL2010 NC_011000.1 2218399 2218677 R hypothetical protein complement(2218399..2218677) Burkholderia cenocepacia J2315 6932183 YP_002231138.1 CDS ompR NC_011000.1 2218945 2219670 D part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 2218945..2219670 Burkholderia cenocepacia J2315 6932184 YP_002231139.1 CDS BCAL2012 NC_011000.1 2219712 2221073 D putative oxidative stress related two-component regulatory system, sensor kinase protein 2219712..2221073 Burkholderia cenocepacia J2315 6933894 YP_002231140.1 CDS BCAL2013 NC_011000.1 2221263 2221811 D AhpC/TSA family protein 2221263..2221811 Burkholderia cenocepacia J2315 6932185 YP_002231141.1 CDS BCAL2014 NC_011000.1 2221888 2222415 D carboxymuconolactone decarboxylase family protein 2221888..2222415 Burkholderia cenocepacia J2315 6932186 YP_002231142.1 CDS ispF NC_011000.1 2222541 2223026 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(2222541..2223026) Burkholderia cenocepacia J2315 6932187 YP_002231143.1 CDS ispD NC_011000.1 2223055 2223765 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(2223055..2223765) Burkholderia cenocepacia J2315 6933765 YP_002231144.1 CDS mfd NC_011000.1 2223849 2227343 D transcription-repair coupling factor 2223849..2227343 Burkholderia cenocepacia J2315 6933764 YP_002231145.1 CDS BCAL2018 NC_011000.1 2227448 2228668 D catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 2227448..2228668 Burkholderia cenocepacia J2315 6933819 YP_002231146.1 CDS BCAL2019 NC_011000.1 2228729 2229748 D phenylserine dehydratase 2228729..2229748 Burkholderia cenocepacia J2315 6932188 YP_002231147.1 CDS BCAL2020 NC_011000.1 2229893 2230327 D hypothetical protein 2229893..2230327 Burkholderia cenocepacia J2315 6932189 YP_002231148.1 CDS BCAL2021 NC_011000.1 2230412 2232934 R putative penicillin-binding protein complement(2230412..2232934) Burkholderia cenocepacia J2315 6932190 YP_002231149.1 CDS BCAL2022 NC_011000.1 2233378 2234058 D PspA/IM30 family protein 2233378..2234058 Burkholderia cenocepacia J2315 6932191 YP_002231150.1 CDS BCAL2023 NC_011000.1 2234154 2235332 D hypothetical protein 2234154..2235332 Burkholderia cenocepacia J2315 6932192 YP_002231151.1 CDS mscL NC_011000.1 2235571 2236002 D homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2235571..2236002 Burkholderia cenocepacia J2315 6932193 YP_002231152.1 CDS BCAL2025 NC_011000.1 2236291 2236782 D hypothetical protein 2236291..2236782 Burkholderia cenocepacia J2315 6933850 YP_002231153.1 CDS BCAL2026 NC_011000.1 2236849 2237742 R putative glyoxylate-realted oxidoreductase complement(2236849..2237742) Burkholderia cenocepacia J2315 6932194 YP_002231154.1 CDS BCAL2027 NC_011000.1 2237877 2238086 D hypothetical protein 2237877..2238086 Burkholderia cenocepacia J2315 6932195 YP_002231155.1 CDS BCAL2028 NC_011000.1 2238308 2239237 D LysR family regulatory protein 2238308..2239237 Burkholderia cenocepacia J2315 6932196 YP_002231156.1 CDS BCAL2029 NC_011000.1 2239333 2240745 R catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase complement(2239333..2240745) Burkholderia cenocepacia J2315 6932197 YP_002231157.1 CDS BCAL2030 NC_011000.1 2241253 2241606 D putative purine catabolism-related protein 2241253..2241606 Burkholderia cenocepacia J2315 6932198 YP_002231158.1 CDS BCAL2031 NC_011000.1 2241658 2242851 D hypothetical protein 2241658..2242851 Burkholderia cenocepacia J2315 6932199 YP_002231159.1 CDS BCAL2032 NC_011000.1 2242953 2243363 R hypothetical protein complement(2242953..2243363) Burkholderia cenocepacia J2315 6932200 YP_002231160.1 CDS BCAL2033 NC_011000.1 2243424 2244335 R LysR family regulatory protein complement(2243424..2244335) Burkholderia cenocepacia J2315 6932201 YP_002231161.1 CDS BCAL2034 NC_011000.1 2244479 2245294 D hypothetical protein 2244479..2245294 Burkholderia cenocepacia J2315 6932202 YP_002231162.1 CDS BCAL2035A NC_011000.1 2245328 2245732 R endoribonuclease L-PSP family protein complement(2245328..2245732) Burkholderia cenocepacia J2315 6932203 YP_002231163.1 CDS BCAL2036 NC_011000.1 2245883 2246848 D LysR family regulatory protein 2245883..2246848 Burkholderia cenocepacia J2315 6932204 YP_002231164.1 CDS BCAL2037 NC_011000.1 2246930 2247442 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(2246930..2247442) Burkholderia cenocepacia J2315 6932205 YP_002231165.1 CDS BCAL2038 NC_011000.1 2247439 2248452 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(2247439..2248452) Burkholderia cenocepacia J2315 6932206 YP_002231166.1 CDS BCAL2039 NC_011000.1 2248515 2249036 R putative uricase complement(2248515..2249036) Burkholderia cenocepacia J2315 6932207 YP_002231167.1 CDS BCAL2040 NC_011000.1 2249033 2249986 R polysaccharide deacetylase complement(2249033..2249986) Burkholderia cenocepacia J2315 6932208 YP_002231168.1 CDS hyuE NC_011000.1 2250147 2250938 R hydantoin racemase complement(2250147..2250938) Burkholderia cenocepacia J2315 6932209 YP_002231169.1 CDS BCAL2042 NC_011000.1 2250949 2252541 R putative transport-related membrane protein complement(2250949..2252541) Burkholderia cenocepacia J2315 6933743 YP_002231170.1 CDS BCAL2043 NC_011000.1 2252583 2253287 R GntR family regulatory protein complement(2252583..2253287) Burkholderia cenocepacia J2315 6932210 YP_002231171.1 CDS ldcA NC_011000.1 2253596 2254534 R catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A complement(2253596..2254534) Burkholderia cenocepacia J2315 6932211 YP_002231172.1 CDS BCAL2045 NC_011000.1 2254636 2255232 R putative deaminase complement(2254636..2255232) Burkholderia cenocepacia J2315 6933778 YP_002231173.1 CDS BCAL2046 NC_011000.1 2255229 2255630 R hypothetical protein complement(2255229..2255630) Burkholderia cenocepacia J2315 6932212 YP_002231174.1 CDS BCAL2047 NC_011000.1 2255931 2257175 R major facilitator superfamily protein complement(2255931..2257175) Burkholderia cenocepacia J2315 6932213 YP_002231175.1 CDS BCAL2048 NC_011000.1 2257480 2258250 D GntR family regulatory protein 2257480..2258250 Burkholderia cenocepacia J2315 6932214 YP_002231176.1 CDS BCAL2049 NC_011000.1 2258247 2259986 D N-terminal region is similar to Escherichia coli L-aspartate oxidase NadB UniProt:P10902 (EMBL:ECRBAB) (540 aa) fasta scores: E()=1.7e-13, 24.687% id in 559 aa. Full length CDS is similar to Mycobacterium bovis fumarate reductase flavoprotein subunit FrdA UniProt:P64175 (EMBL:BX248339) (583 aa) fasta scores: E()=3.9e-16, 27.395% id in 595 aa; putative oxidoreductase 2258247..2259986 Burkholderia cenocepacia J2315 6932215 YP_002231177.1 CDS BCAL2050 NC_011000.1 2259998 2260243 D 4Fe-4S ferredoxin 2259998..2260243 Burkholderia cenocepacia J2315 6932216 YP_002231178.1 CDS BCAL2051 NC_011000.1 2260294 2261718 D putative extracellular subtrate-binding protein 2260294..2261718 Burkholderia cenocepacia J2315 6932217 YP_002231179.1 CDS BCAL2052 NC_011000.1 2261763 2262638 D binding-protein-dependent transport system inner membrane protein 2261763..2262638 Burkholderia cenocepacia J2315 6932218 YP_002231180.1 CDS BCAL2053 NC_011000.1 2262635 2263423 D ABC transporter ATP-binding protein 2262635..2263423 Burkholderia cenocepacia J2315 6932219 YP_002231181.1 CDS BCAL2054 NC_011000.1 2263461 2264456 D putative HEAT-like repeat protein 2263461..2264456 Burkholderia cenocepacia J2315 6932220 YP_002231182.1 CDS BCAL2055 NC_011000.1 2264453 2264731 D hypothetical protein 2264453..2264731 Burkholderia cenocepacia J2315 6932221 YP_002231183.1 CDS BCAL2056 NC_011000.1 2264838 2265722 D putative dehydrogenase 2264838..2265722 Burkholderia cenocepacia J2315 6932222 YP_002231184.1 CDS BCAL2057 NC_011000.1 2265772 2266260 D NUDIX hydrolase 2265772..2266260 Burkholderia cenocepacia J2315 6932223 YP_002231185.1 CDS BCAL2058 NC_011000.1 2266357 2266806 D hypothetical protein 2266357..2266806 Burkholderia cenocepacia J2315 6932224 YP_002231186.1 CDS BCAL2059 NC_011000.1 2266887 2267474 R putative 2'-5' RNA ligase complement(2266887..2267474) Burkholderia cenocepacia J2315 6932225 YP_002231187.1 CDS BCAL2060 NC_011000.1 2267629 2268246 D putative exonuclease 2267629..2268246 Burkholderia cenocepacia J2315 6932226 YP_002231188.1 CDS guaA NC_011000.1 2268455 2270074 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(2268455..2270074) Burkholderia cenocepacia J2315 6932227 YP_002231189.1 CDS BCAL2062 NC_011000.1 2270182 2270790 R hypothetical protein complement(2270182..2270790) Burkholderia cenocepacia J2315 6933688 YP_002231190.1 CDS guaB NC_011000.1 2270797 2272257 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(2270797..2272257) Burkholderia cenocepacia J2315 6932228 YP_002231191.1 CDS BCAL2064 NC_011000.1 2272538 2273347 R hypothetical protein complement(2272538..2273347) Burkholderia cenocepacia J2315 6933689 YP_002231192.1 CDS BCAL2065 NC_011000.1 2273376 2274140 R hypothetical protein complement(2273376..2274140) Burkholderia cenocepacia J2315 6932229 YP_002231193.1 CDS BCAL2067 NC_011000.1 2275475 2276191 D hypothetical protein 2275475..2276191 Burkholderia cenocepacia J2315 6932231 YP_002231194.1 CDS BCAL2068 NC_011000.1 2276313 2277278 D hypothetical protein 2276313..2277278 Burkholderia cenocepacia J2315 6932232 YP_002231195.1 CDS BCAL2069 NC_011000.1 2277321 2277644 R hypothetical protein complement(2277321..2277644) Burkholderia cenocepacia J2315 6932233 YP_002231196.1 CDS BCAL2070 NC_011000.1 2277649 2278086 R hypothetical protein complement(2277649..2278086) Burkholderia cenocepacia J2315 6932234 YP_002231197.1 CDS smpB NC_011000.1 2278186 2278632 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2278186..2278632 Burkholderia cenocepacia J2315 6932235 YP_002231198.1 CDS BCAL2072 NC_011000.1 2278785 2279720 R hypothetical protein complement(2278785..2279720) Burkholderia cenocepacia J2315 6934146 YP_002231199.1 CDS BCAL2073 NC_011000.1 2279754 2280221 R hypothetical protein complement(2279754..2280221) Burkholderia cenocepacia J2315 6932236 YP_002231200.1 CDS ppsA NC_011000.1 2280399 2282801 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(2280399..2282801) Burkholderia cenocepacia J2315 6932237 YP_002231201.1 CDS BCAL2075 NC_011000.1 2283177 2283992 D hypothetical protein 2283177..2283992 Burkholderia cenocepacia J2315 6933984 YP_002231202.1 CDS BCAL2076 NC_011000.1 2284090 2284872 R putative RNA methylase protein complement(2284090..2284872) Burkholderia cenocepacia J2315 6932238 YP_002231203.1 CDS rnhB NC_011000.1 2284869 2285513 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(2284869..2285513) Burkholderia cenocepacia J2315 6932239 YP_002231204.1 CDS lpxB NC_011000.1 2285510 2286679 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(2285510..2286679) Burkholderia cenocepacia J2315 6934054 YP_002231205.1 CDS lpxA NC_011000.1 2286683 2287471 R catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase complement(2286683..2287471) Burkholderia cenocepacia J2315 6932240 YP_002231206.1 CDS fabZ NC_011000.1 2287539 2288021 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(2287539..2288021) Burkholderia cenocepacia J2315 6933797 YP_002231207.1 CDS lpxD NC_011000.1 2288136 2289215 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(2288136..2289215) Burkholderia cenocepacia J2315 6933550 YP_002231208.1 CDS BCAL2082 NC_011000.1 2289232 2289759 R chaperone protein Skp complement(2289232..2289759) Burkholderia cenocepacia J2315 6933798 YP_002231209.1 CDS BCAL2083 NC_011000.1 2289794 2292103 R outer membrane protein assembly factor YaeT complement(2289794..2292103) Burkholderia cenocepacia J2315 6932241 YP_002231210.1 CDS ecfE NC_011000.1 2292165 2293535 R subfamily M50B metallo peptidase; protease EcfE complement(2292165..2293535) Burkholderia cenocepacia J2315 6932242 YP_002231211.1 CDS dxr NC_011000.1 2293547 2294743 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2293547..2294743) Burkholderia cenocepacia J2315 6933525 YP_002231212.1 CDS BCAL2086 NC_011000.1 2294759 2295580 R putative phosphatidate cytidylyltransferase membrane protein complement(2294759..2295580) Burkholderia cenocepacia J2315 6933524 YP_002231213.1 CDS uppS NC_011000.1 2295574 2296356 R undecaprenyl pyrophosphate synthetase complement(2295574..2296356) Burkholderia cenocepacia J2315 6932243 YP_002231214.1 CDS frr NC_011000.1 2296406 2296966 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2296406..2296966) Burkholderia cenocepacia J2315 6934221 YP_002231215.1 CDS pyrH NC_011000.1 2297071 2297784 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2297071..2297784) Burkholderia cenocepacia J2315 6933604 YP_002231216.1 CDS tsf NC_011000.1 2297941 2298822 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2297941..2298822) Burkholderia cenocepacia J2315 6934018 YP_002231217.1 CDS rpsB NC_011000.1 2298985 2299725 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2298985..2299725) Burkholderia cenocepacia J2315 6934207 YP_002231218.1 CDS map NC_011000.1 2300103 2300918 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 2300103..2300918 Burkholderia cenocepacia J2315 6934101 YP_002231219.1 CDS BCAL2093 NC_011000.1 2300967 2303543 D catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 2300967..2303543 Burkholderia cenocepacia J2315 6933806 YP_002231220.1 CDS BCAL2094 NC_011000.1 2303560 2305437 D putative RNA pseudouridylate synthase 2303560..2305437 Burkholderia cenocepacia J2315 6932244 YP_002231221.1 CDS BCAL2095 NC_011000.1 2305516 2306049 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(2305516..2306049) Burkholderia cenocepacia J2315 6932245 YP_002231222.1 CDS ligA NC_011000.1 2306046 2308121 R DNA ligase complement(2306046..2308121) Burkholderia cenocepacia J2315 6932246 YP_002231223.1 CDS BCAL2097 NC_011000.1 2308288 2309562 R hypothetical protein complement(2308288..2309562) Burkholderia cenocepacia J2315 6933790 YP_002231224.1 CDS BCAL2098 NC_011000.1 2309648 2313160 R putative chromosome partition protein complement(2309648..2313160) Burkholderia cenocepacia J2315 6932247 YP_002231225.1 CDS BCAL2099 NC_011000.1 2313299 2314240 R hypothetical protein complement(2313299..2314240) Burkholderia cenocepacia J2315 6932248 YP_002231226.1 CDS BCAL2100 NC_011000.1 2314400 2315632 D catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2314400..2315632 Burkholderia cenocepacia J2315 6932249 YP_002231227.1 CDS dapD NC_011000.1 2315678 2316505 D catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2315678..2316505 Burkholderia cenocepacia J2315 6932250 YP_002231228.1 CDS BCAL2102 NC_011000.1 2316505 2316873 D ArsC family protein 2316505..2316873 Burkholderia cenocepacia J2315 6933491 YP_002231229.1 CDS dapE NC_011000.1 2316957 2318096 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2316957..2318096 Burkholderia cenocepacia J2315 6932251 YP_002231230.1 CDS BCAL2104 NC_011000.1 2318108 2319016 D involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2318108..2319016 Burkholderia cenocepacia J2315 6933492 YP_002231231.1 CDS cls NC_011000.1 2319149 2320588 D catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2319149..2320588 Burkholderia cenocepacia J2315 6932252 YP_002231232.1 CDS gpo NC_011000.1 2320647 2321126 R glutathione peroxidase complement(2320647..2321126) Burkholderia cenocepacia J2315 6932253 YP_002231233.1 CDS BCAL2107 NC_011000.1 2321263 2323194 D ABC transporter ATP-binding protein 2321263..2323194 Burkholderia cenocepacia J2315 6933666 YP_002231234.1 CDS BCAL2108 NC_011000.1 2323385 2323681 R hypothetical protein complement(2323385..2323681) Burkholderia cenocepacia J2315 6932254 YP_002231235.1 CDS radA NC_011000.1 2323801 2325177 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(2323801..2325177) Burkholderia cenocepacia J2315 6932255 YP_002231236.1 CDS alr NC_011000.1 2325189 2326259 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(2325189..2326259) Burkholderia cenocepacia J2315 6934024 YP_002231237.1 CDS BCAL2111 NC_011000.1 2326478 2327785 D lysophospholipid transporter LplT 2326478..2327785 Burkholderia cenocepacia J2315 6933485 YP_002231238.1 CDS thiD NC_011000.1 2327844 2328653 D phosphomethylpyrimidine kinase 2327844..2328653 Burkholderia cenocepacia J2315 6932256 YP_002231239.1 CDS BCAL2113 NC_011000.1 2328672 2329637 R hypothetical protein complement(2328672..2329637) Burkholderia cenocepacia J2315 6934180 YP_002231240.1 CDS BCAL2114 NC_011000.1 2329634 2330665 R uracil DNA glycosylase superfamily protein complement(2329634..2330665) Burkholderia cenocepacia J2315 6932257 YP_002231241.1 CDS BCAL2115 NC_011000.1 2330652 2331152 R putative ribosomal-protein acetyltransferase complement(2330652..2331152) Burkholderia cenocepacia J2315 6932258 YP_002231242.1 CDS BCAL2115A NC_011000.1 2331149 2331967 R family M22 non-peptidase-like protein complement(2331149..2331967) Burkholderia cenocepacia J2315 6932259 YP_002231243.1 CDS BCAL2116 NC_011000.1 2332064 2332333 D putative acyl-CoA-binding protein 2332064..2332333 Burkholderia cenocepacia J2315 6932260 YP_002231244.1 CDS BCAL2117 NC_011000.1 2332691 2334235 D putative ATP-dependent RNA helicase 2332691..2334235 Burkholderia cenocepacia J2315 6932261 YP_002231245.1 CDS aceA NC_011000.1 2334626 2335933 D isocitrate lyase 2334626..2335933 Burkholderia cenocepacia J2315 6932262 YP_002231246.1 CDS BCAL2119 NC_011000.1 2336145 2336579 R universal stress protein family protein complement(2336145..2336579) Burkholderia cenocepacia J2315 6933274 YP_002231247.1 CDS BCAL2120 NC_011000.1 2336745 2337650 R LysR family regulatory protein complement(2336745..2337650) Burkholderia cenocepacia J2315 6932263 YP_002231248.1 CDS BCAL2121 NC_011000.1 2337805 2338566 D putative dehalogenase 2337805..2338566 Burkholderia cenocepacia J2315 6932264 YP_002231249.1 CDS aceB NC_011000.1 2338632 2340224 D Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 2338632..2340224 Burkholderia cenocepacia J2315 6932265 YP_002231250.1 CDS BCAL2123 NC_011000.1 2340357 2340770 R hypothetical protein complement(2340357..2340770) Burkholderia cenocepacia J2315 6933275 YP_002231251.1 CDS BCAL2124 NC_011000.1 2341038 2341922 D AraC family regulatory protein 2341038..2341922 Burkholderia cenocepacia J2315 6932266 YP_002231252.1 CDS BCAL2125 NC_011000.1 2341948 2342412 R putative acetyltransferase complement(2341948..2342412) Burkholderia cenocepacia J2315 6932267 YP_002231253.1 CDS gltX NC_011000.1 2343928 2345337 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(2343928..2345337) Burkholderia cenocepacia J2315 6933376 YP_002231254.1 CDS BCAL2127 NC_011000.1 2345617 2346534 D putative patatin-like phospholipase 2345617..2346534 Burkholderia cenocepacia J2315 6933656 YP_002231255.1 CDS BCAL2128 NC_011000.1 2346676 2347350 R family C40 cysteine peptidase complement(2346676..2347350) Burkholderia cenocepacia J2315 6932269 YP_002231256.1 CDS BCAL2129 NC_011000.1 2347479 2349101 R ABC transporter ATP-binding protein complement(2347479..2349101) Burkholderia cenocepacia J2315 6932270 YP_002231257.1 CDS BCAL2130 NC_011000.1 2349098 2350195 R binding-protein-dependent transport system protein complement(2349098..2350195) Burkholderia cenocepacia J2315 6932271 YP_002231258.1 CDS BCAL2131 NC_011000.1 2350244 2351287 R binding-protein-dependent transport system protein complement(2350244..2351287) Burkholderia cenocepacia J2315 6932272 YP_002231259.1 CDS BCAL2132 NC_011000.1 2351340 2353166 R extracellular solute-binding protein complement(2351340..2353166) Burkholderia cenocepacia J2315 6932273 YP_002231260.1 CDS BCAL2133 NC_011000.1 2353355 2353711 R hypothetical protein complement(2353355..2353711) Burkholderia cenocepacia J2315 6932274 YP_002231261.1 CDS BCAL2134 NC_011000.1 2354006 2357224 D RND family efflux system transporter protein 2354006..2357224 Burkholderia cenocepacia J2315 6932275 YP_002231262.1 CDS BCAL2135 NC_011000.1 2357214 2358389 D efflux system transport protein 2357214..2358389 Burkholderia cenocepacia J2315 6932276 YP_002231263.1 CDS BCAL2136 NC_011000.1 2358406 2359797 D efflux system outer membrane protein 2358406..2359797 Burkholderia cenocepacia J2315 6932277 YP_002231264.1 CDS BCAL2136A NC_011000.1 2359908 2360165 D hypothetical protein 2359908..2360165 Burkholderia cenocepacia J2315 6932278 YP_002231265.1 CDS BCAL2137 NC_011000.1 2360248 2360913 R two-component regulatory system, response regulator protein complement(2360248..2360913) Burkholderia cenocepacia J2315 6932279 YP_002231266.1 CDS BCAL2138 NC_011000.1 2360933 2362324 R two-component regulatory system, sensor kinase protein complement(2360933..2362324) Burkholderia cenocepacia J2315 6932280 YP_002231267.1 CDS BCAL2139 NC_011000.1 2362336 2363010 R two-component regulatory system, response regulator protein complement(2362336..2363010) Burkholderia cenocepacia J2315 6932281 YP_002231268.1 CDS BCAL2140 NC_011000.1 2363228 2363527 D hypothetical protein 2363228..2363527 Burkholderia cenocepacia J2315 6932282 YP_002231269.1 CDS cyoD NC_011000.1 2363636 2363968 R cytochrome O ubiquinol oxidase protein complement(2363636..2363968) Burkholderia cenocepacia J2315 6932283 YP_002231270.1 CDS cyoC NC_011000.1 2363969 2364577 R cytochrome o ubiquinol oxidase subunit III complement(2363969..2364577) Burkholderia cenocepacia J2315 6933469 YP_002231271.1 CDS cyoB NC_011000.1 2364577 2366583 R ubiquinol oxidase polypeptide I complement(2364577..2366583) Burkholderia cenocepacia J2315 6933468 YP_002231272.1 CDS cyoA NC_011000.1 2366587 2367474 R ubiquinol oxidase polypeptide II complement(2366587..2367474) Burkholderia cenocepacia J2315 6933467 YP_002231273.1 CDS BCAL2145 NC_011000.1 2367748 2369277 R NADH-ubiquinone oxidoreductase subunit complement(2367748..2369277) Burkholderia cenocepacia J2315 6933466 YP_002231274.1 CDS ask NC_011000.1 2370509 2371762 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(2370509..2371762) Burkholderia cenocepacia J2315 6933377 YP_002231275.1 CDS BCAL2147 NC_011000.1 2372105 2373526 R tRNA(Ile)-lysidine synthase complement(2372105..2373526) Burkholderia cenocepacia J2315 6933318 YP_002231276.1 CDS accA NC_011000.1 2373573 2374544 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(2373573..2374544) Burkholderia cenocepacia J2315 6932285 YP_002231277.1 CDS BCAL2149 NC_011000.1 2374648 2375475 R HhH-GPD superfamily base excision DNA repair protein complement(2374648..2375475) Burkholderia cenocepacia J2315 6933270 YP_002231278.1 CDS cysS NC_011000.1 2375519 2376916 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(2375519..2376916) Burkholderia cenocepacia J2315 6932286 YP_002231279.1 CDS BCAL2151 NC_011000.1 2377151 2377873 D hypothetical protein 2377151..2377873 Burkholderia cenocepacia J2315 6933480 YP_002231281.1 CDS ppiB NC_011000.1 2378577 2379068 D peptidyl-prolyl cis-trans isomerase B 2378577..2379068 Burkholderia cenocepacia J2315 6932287 YP_002231282.1 CDS BCAL2154 NC_011000.1 2379096 2379896 D catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 2379096..2379896 Burkholderia cenocepacia J2315 6933982 YP_002231283.1 CDS BCAL2155 NC_011000.1 2379955 2380728 R serine acetyltransferase complement(2379955..2380728) Burkholderia cenocepacia J2315 6932288 YP_002231284.1 CDS BCAL2156 NC_011000.1 2381024 2381758 R putative tRNA/rRNA methyltransferase protein complement(2381024..2381758) Burkholderia cenocepacia J2315 6932289 YP_002231285.1 CDS suhB NC_011000.1 2382131 2382934 D inositol-1-monophosphatase 2382131..2382934 Burkholderia cenocepacia J2315 6932290 YP_002231286.1 CDS BCAL2158 NC_011000.1 2383242 2384864 D FAD dependent oxidoreductase 2383242..2384864 Burkholderia cenocepacia J2315 6934162 YP_002231287.1 CDS BCAL2159 NC_011000.1 2384987 2385313 R hypothetical protein complement(2384987..2385313) Burkholderia cenocepacia J2315 6932291 YP_002231288.1 CDS mutS NC_011000.1 2385670 2388327 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2385670..2388327 Burkholderia cenocepacia J2315 6932292 YP_002231289.1 CDS BCAL2161 NC_011000.1 2388332 2389579 D hypothetical protein 2388332..2389579 Burkholderia cenocepacia J2315 6933866 YP_002231290.1 CDS BCAL2162 NC_011000.1 2389559 2390101 R putative FkbP-type peptidyl-prolyl cis-trans isomerase complement(2389559..2390101) Burkholderia cenocepacia J2315 6932293 YP_002231291.1 CDS BCAL2163 NC_011000.1 2390134 2391354 D Cupin superfamily protein 2390134..2391354 Burkholderia cenocepacia J2315 6932294 YP_002231292.1 CDS BCAL2165 NC_011000.1 2391963 2392739 R metallo-beta-lactamase superfamily protein complement(2391963..2392739) Burkholderia cenocepacia J2315 6932295 YP_002231293.1 CDS BCAL2166 NC_011000.1 2392744 2393889 R putative lipoprotein complement(2392744..2393889) Burkholderia cenocepacia J2315 6932296 YP_002231294.1 CDS dapA NC_011000.1 2394001 2394903 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(2394001..2394903) Burkholderia cenocepacia J2315 6932297 YP_002231295.1 CDS BCAL2168 NC_011000.1 2394950 2395552 R putative methyltransferase complement(2394950..2395552) Burkholderia cenocepacia J2315 6933489 YP_002231296.1 CDS BCAL2169 NC_011000.1 2395561 2396763 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(2395561..2396763) Burkholderia cenocepacia J2315 6932298 YP_002231297.1 CDS BCAL2170 NC_011000.1 2396772 2397434 R subfamily M50B metallo peptidase; subfamily M50B metalopeptidase complement(2396772..2397434) Burkholderia cenocepacia J2315 6932299 YP_002231298.1 CDS BCAL2171 NC_011000.1 2397482 2398114 R hypothetical protein complement(2397482..2398114) Burkholderia cenocepacia J2315 6932300 YP_002231299.1 CDS BCAL2172 NC_011000.1 2398184 2399023 R putative phosphoesterase complement(2398184..2399023) Burkholderia cenocepacia J2315 6932301 YP_002231300.1 CDS BCAL2173 NC_011000.1 2399096 2399950 R putative hydrolase complement(2399096..2399950) Burkholderia cenocepacia J2315 6932302 YP_002231301.1 CDS BCAL2174 NC_011000.1 2400164 2401021 R hypothetical protein complement(2400164..2401021) Burkholderia cenocepacia J2315 6932303 YP_002231302.1 CDS BCAL2175 NC_011000.1 2401165 2401689 D hypothetical protein 2401165..2401689 Burkholderia cenocepacia J2315 6932304 YP_002231303.1 CDS BCAL2176 NC_011000.1 2401715 2402665 D putative Hsp33 chaperonin 2401715..2402665 Burkholderia cenocepacia J2315 6932305 YP_002231304.1 CDS BCAL2177 NC_011000.1 2402803 2403168 D putative lipoprotein 2402803..2403168 Burkholderia cenocepacia J2315 6932306 YP_002231305.1 CDS ftsB NC_011000.1 2403261 2403686 R forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB complement(2403261..2403686) Burkholderia cenocepacia J2315 6932307 YP_002231306.1 CDS eno NC_011000.1 2403768 2405051 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(2403768..2405051) Burkholderia cenocepacia J2315 6932308 YP_002231307.1 CDS BCAL2180 NC_011000.1 2405158 2406012 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2405158..2406012) Burkholderia cenocepacia J2315 6933534 YP_002231308.1 CDS pyrG NC_011000.1 2406009 2407667 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2406009..2407667) Burkholderia cenocepacia J2315 6932309 YP_002231309.1 CDS BCAL2182 NC_011000.1 2407847 2408692 R hypothetical protein complement(2407847..2408692) Burkholderia cenocepacia J2315 6934017 YP_002231310.1 CDS BCAL2183 NC_011000.1 2408974 2411481 R metallo-beta-lactamase superfamily membrane protein complement(2408974..2411481) Burkholderia cenocepacia J2315 6932310 YP_002231311.1 CDS BCAL2184 NC_011000.1 2411511 2412299 R putative TatD related DNase complement(2411511..2412299) Burkholderia cenocepacia J2315 6932311 YP_002231312.1 CDS lolD NC_011000.1 2412367 2413062 R lipoprotein releasing system ATP-binding protein complement(2412367..2413062) Burkholderia cenocepacia J2315 6932312 YP_002231313.1 CDS BCAL2186 NC_011000.1 2413118 2414371 R putative lipoprotein releasing system transmembrane protein complement(2413118..2414371) Burkholderia cenocepacia J2315 6933794 YP_002231314.1 CDS BCAL2187 NC_011000.1 2414521 2415597 D hypothetical protein 2414521..2415597 Burkholderia cenocepacia J2315 6932313 YP_002231315.1 CDS BCAL2188 NC_011000.1 2415612 2417309 D putative single-stranded-DNA-specific exonuclease 2415612..2417309 Burkholderia cenocepacia J2315 6932314 YP_002231316.1 CDS prfB NC_011000.1 2417463 2418567 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 join(2417463..2417543,2417545..2418567) Burkholderia cenocepacia J2315 6932315 YP_002231317.1 CDS lysS NC_011000.1 2418641 2420167 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2418641..2420167 Burkholderia cenocepacia J2315 6934163 YP_002231318.1 CDS BCAL2191 NC_011000.1 2420461 2421243 D hypothetical protein 2420461..2421243 Burkholderia cenocepacia J2315 6933801 YP_002231319.1 CDS BCAL2192 NC_011000.1 2421386 2421595 R hypothetical protein complement(2421386..2421595) Burkholderia cenocepacia J2315 6932316 YP_002231320.1 CDS fdx NC_011000.1 2421615 2421956 R 2Fe-2S ferredoxin complement(2421615..2421956) Burkholderia cenocepacia J2315 6932317 YP_002231321.1 CDS hscA NC_011000.1 2422045 2423913 R involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA complement(2422045..2423913) Burkholderia cenocepacia J2315 6933558 YP_002231322.1 CDS hscB NC_011000.1 2423968 2424495 R J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB complement(2423968..2424495) Burkholderia cenocepacia J2315 6933733 YP_002231323.1 CDS BCAL2196 NC_011000.1 2424592 2424915 R HesB family protein complement(2424592..2424915) Burkholderia cenocepacia J2315 6933734 YP_002231324.1 CDS BCAL2197 NC_011000.1 2424981 2425388 R scaffold protein complement(2424981..2425388) Burkholderia cenocepacia J2315 6932318 YP_002231325.1 CDS iscS NC_011000.1 2425456 2426679 R catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase complement(2425456..2426679) Burkholderia cenocepacia J2315 6932319 YP_002231326.1 CDS BCAL2199 NC_011000.1 2426745 2427284 R putative transcriptional regulator protein complement(2426745..2427284) Burkholderia cenocepacia J2315 6933762 YP_002231327.1 CDS BCAL2200 NC_011000.1 2427399 2427881 R low molecular weight phosphotyrosine protein phosphatase complement(2427399..2427881) Burkholderia cenocepacia J2315 6932320 YP_002231328.1 CDS BCAL2201 NC_011000.1 2427983 2428210 R hypothetical protein complement(2427983..2428210) Burkholderia cenocepacia J2315 6932321 YP_002231329.1 CDS BCAL2202 NC_011000.1 2428339 2429751 R putative iron-sulfur binding protein complement(2428339..2429751) Burkholderia cenocepacia J2315 6932322 YP_002231330.1 CDS BCAL2203 NC_011000.1 2429786 2430508 R hypothetical protein complement(2429786..2430508) Burkholderia cenocepacia J2315 6932323 YP_002231331.1 CDS BCAL2204 NC_011000.1 2430692 2431501 D IclR family regulatory protein 2430692..2431501 Burkholderia cenocepacia J2315 6932324 YP_002231332.1 CDS BCAL2205 NC_011000.1 2431615 2432781 R family S11 serine peptidase; D-alanyl-D-alanine endopeptidase complement(2431615..2432781) Burkholderia cenocepacia J2315 6932325 YP_002231333.1 CDS phaP NC_011000.1 2433436 2434002 D phasin-like protein 2433436..2434002 Burkholderia cenocepacia J2315 6932326 YP_002231334.1 CDS BCAL2207 NC_011000.1 2434201 2435970 R putative dihydrolipoamide dehydrogenase complement(2434201..2435970) Burkholderia cenocepacia J2315 6933951 YP_002231335.1 CDS pdhB NC_011000.1 2436248 2437891 R dihydrolipoamide acetyltransferase complement(2436248..2437891) Burkholderia cenocepacia J2315 6932327 YP_002231336.1 CDS aceE NC_011000.1 2437960 2440656 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(2437960..2440656) Burkholderia cenocepacia J2315 6933935 YP_002231337.1 CDS BCAL2210 NC_011000.1 2440930 2443446 D two-component regulatory system, sensor kinase protein 2440930..2443446 Burkholderia cenocepacia J2315 6932328 YP_002231338.1 CDS BCAL2211 NC_011000.1 2443443 2444081 D two-component regulatory system, response regulator protein 2443443..2444081 Burkholderia cenocepacia J2315 6932329 YP_002231339.1 CDS folD NC_011000.1 2444324 2445184 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2444324..2445184 Burkholderia cenocepacia J2315 6932330 YP_002231340.1 CDS BCAL2213 NC_011000.1 2445429 2447516 D subfamily M3A metallo peptidase; oligopeptidase A 2445429..2447516 Burkholderia cenocepacia J2315 6933601 YP_002231341.1 CDS BCAL2214 NC_011000.1 2447576 2448751 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2447576..2448751) Burkholderia cenocepacia J2315 6932331 YP_002231342.1 CDS BCAL2215 NC_011000.1 2448903 2449595 D putative racemase 2448903..2449595 Burkholderia cenocepacia J2315 6932332 YP_002231343.1 CDS BCAL2216 NC_011000.1 2450104 2451675 R Similar to Alcaligenes eutrophus putative transposase protein tnpc or phg160 SWALL:AAP85912 (EMBL:AY305378) (517 aa) fasta scores: E(): 1.3e-127, 64.52% id in 513 aa; putative transposase complement(2450104..2451675) Burkholderia cenocepacia J2315 6932333 YP_002231344.1 CDS BCAL2217 NC_011000.1 2451727 2452074 R Similar to Alcaligenes eutrophus putative transposition-related protein tnpb or phg159 SWALL:AAP85911 (EMBL:AY305378) (115 aa) fasta scores: E(): 1.5e-31, 68.96% id in 116 aa; putative transposase complement(2451727..2452074) Burkholderia cenocepacia J2315 6934273 YP_002231345.1 CDS BCAL2218 NC_011000.1 2452071 2452457 R Similar to Alcaligenes eutrophus putative transposition-related protein tnpa or phg158 SWALL:AAP85910 (EMBL:AY305378) (106 aa) fasta scores: E(): 2.6e-09, 41.12% id in 107 aa; putative transposase complement(2452071..2452457) Burkholderia cenocepacia J2315 6932334 YP_002231346.1 CDS BCAL2220 NC_011000.1 2453579 2454355 D endonuclease/exonuclease/phosphatase family protein 2453579..2454355 Burkholderia cenocepacia J2315 6933378 YP_002231347.1 CDS BCAL2221 NC_011000.1 2454375 2456504 R subfamily S9A unassigned peptidase; putative prolyl oligopeptidase complement(2454375..2456504) Burkholderia cenocepacia J2315 6932336 YP_002231348.1 CDS glnG NC_011000.1 2456572 2458098 R nitrogen regulation protein NR(I) complement(2456572..2458098) Burkholderia cenocepacia J2315 6932337 YP_002231349.1 CDS glnL NC_011000.1 2458136 2459278 R putative nitrogen regulation protein NR(II) complement(2458136..2459278) Burkholderia cenocepacia J2315 6933641 YP_002231350.1 CDS glnA NC_011000.1 2459440 2460855 R glutamine synthetase complement(2459440..2460855) Burkholderia cenocepacia J2315 6933642 YP_002231351.1 CDS BCAL2225 NC_011000.1 2461262 2461729 D hypothetical protein 2461262..2461729 Burkholderia cenocepacia J2315 6933637 YP_002231352.1 CDS BCAL2226 NC_011000.1 2461846 2462661 R putative molybdopterin-binding protein complement(2461846..2462661) Burkholderia cenocepacia J2315 6932338 YP_002231353.1 CDS BCAL2227 NC_011000.1 2462658 2463485 R hypothetical protein complement(2462658..2463485) Burkholderia cenocepacia J2315 6932339 YP_002231354.1 CDS BCAL2228 NC_011000.1 2463602 2464576 R hypothetical protein complement(2463602..2464576) Burkholderia cenocepacia J2315 6932340 YP_002231355.1 CDS BCAL2229 NC_011000.1 2464593 2465582 R hypothetical protein complement(2464593..2465582) Burkholderia cenocepacia J2315 6932341 YP_002231356.1 CDS BCAL2230 NC_011000.1 2465772 2469980 R putative ATP-dependent helicase complement(2465772..2469980) Burkholderia cenocepacia J2315 6932342 YP_002231357.1 CDS BCAL2231 NC_011000.1 2470004 2471383 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2470004..2471383 Burkholderia cenocepacia J2315 6932343 YP_002231358.1 CDS BCAL2232 NC_011000.1 2471437 2471712 D hypothetical protein 2471437..2471712 Burkholderia cenocepacia J2315 6932344 YP_002231359.1 CDS BCAL2233 NC_011000.1 2471974 2473386 R major facilitator superfamily protein complement(2471974..2473386) Burkholderia cenocepacia J2315 6932345 YP_002231360.1 CDS BCAL2234 NC_011000.1 2473476 2474687 R CAIB/BAIF family protein complement(2473476..2474687) Burkholderia cenocepacia J2315 6932346 YP_002231361.1 CDS BCAL2235 NC_011000.1 2474684 2476435 R putative acyl-CoA dehydrogenase complement(2474684..2476435) Burkholderia cenocepacia J2315 6932347 YP_002231362.1 CDS BCAL2236 NC_011000.1 2476609 2477511 D LysR family regulatory protein 2476609..2477511 Burkholderia cenocepacia J2315 6932348 YP_002231363.1 CDS BCAL2237 NC_011000.1 2477803 2479197 R putative aminotransferase complement(2477803..2479197) Burkholderia cenocepacia J2315 6933380 YP_002231364.1 CDS BCAL2238 NC_011000.1 2479226 2480563 R putative glutamine synthetase complement(2479226..2480563) Burkholderia cenocepacia J2315 6932350 YP_002231365.1 CDS BCAL2239 NC_011000.1 2480576 2481412 R family C26 cysteine peptidase; putative gamma-glutamyl-gamma-aminobutyrate hydrolase complement(2480576..2481412) Burkholderia cenocepacia J2315 6932351 YP_002231366.1 CDS BCAL2240 NC_011000.1 2482104 2482901 R HutG protein complement(2482104..2482901) Burkholderia cenocepacia J2315 6932352 YP_002231367.1 CDS BCAL2241 NC_011000.1 2482961 2484322 R catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase complement(2482961..2484322) Burkholderia cenocepacia J2315 6932353 YP_002231368.1 CDS BCAL2242 NC_011000.1 2484534 2485757 R catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase complement(2484534..2485757) Burkholderia cenocepacia J2315 6932354 YP_002231369.1 CDS BCAL2243 NC_011000.1 2485762 2486373 R hypothetical protein complement(2485762..2486373) Burkholderia cenocepacia J2315 6932355 YP_002231370.1 CDS hutU NC_011000.1 2486376 2488064 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(2486376..2488064) Burkholderia cenocepacia J2315 6932356 YP_002231371.1 CDS BCAL2245 NC_011000.1 2488104 2488799 R putative histidine utilization repressor complement(2488104..2488799) Burkholderia cenocepacia J2315 6933741 YP_002231372.1 CDS hutH NC_011000.1 2488804 2490327 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(2488804..2490327) Burkholderia cenocepacia J2315 6932357 YP_002231373.1 CDS gltI NC_011000.1 2490541 2491461 D periplasmic glutamate/aspartate-binding protein 2490541..2491461 Burkholderia cenocepacia J2315 6933740 YP_002231374.1 CDS BCAL2248 NC_011000.1 2491483 2492238 R 4'-phosphopantetheinyl transferase superfamily protein complement(2491483..2492238) Burkholderia cenocepacia J2315 6933651 YP_002231375.1 CDS BCAL2249 NC_011000.1 2492366 2493409 R family S33 serine peptidase complement(2492366..2493409) Burkholderia cenocepacia J2315 6932358 YP_002231376.1 CDS BCAL2250 NC_011000.1 2493643 2494584 D LysR family regulatory protein 2493643..2494584 Burkholderia cenocepacia J2315 6932359 YP_002231377.1 CDS BCAL2251 NC_011000.1 2494744 2495976 D major facilitator superfamily protein 2494744..2495976 Burkholderia cenocepacia J2315 6932360 YP_002231378.1 CDS BCAL2252 NC_011000.1 2496112 2497596 R putative DNA photolyase complement(2496112..2497596) Burkholderia cenocepacia J2315 6932361 YP_002231379.1 CDS BCAL2253 NC_011000.1 2497917 2498396 D hypothetical protein 2497917..2498396 Burkholderia cenocepacia J2315 6932362 YP_002231380.1 CDS BCAL2254 NC_011000.1 2498410 2498862 D hypothetical protein 2498410..2498862 Burkholderia cenocepacia J2315 6932363 YP_002231381.1 CDS BCAL2255a NC_011000.1 2498937 2499917 R hypothetical protein complement(2498937..2499917) Burkholderia cenocepacia J2315 6932364 YP_002231382.1 CDS BCAL2256 NC_011000.1 2499935 2500726 R short chain dehydrogenase complement(2499935..2500726) Burkholderia cenocepacia J2315 6932365 YP_002231383.1 CDS BCAL2257 NC_011000.1 2500768 2501961 R hypothetical protein complement(2500768..2501961) Burkholderia cenocepacia J2315 6932366 YP_002231384.1 CDS BCAL2258 NC_011000.1 2501958 2503067 R hypothetical protein complement(2501958..2503067) Burkholderia cenocepacia J2315 6932367 YP_002231385.1 CDS cysD2 NC_011000.1 2503282 2504178 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2503282..2504178 Burkholderia cenocepacia J2315 6932368 YP_002231386.1 CDS cysNC NC_011000.1 2504178 2506076 D in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 2504178..2506076 Burkholderia cenocepacia J2315 6933474 YP_002231387.1 CDS BCAL2261 NC_011000.1 2506183 2507370 D LuxR superfamily regulatory protein 2506183..2507370 Burkholderia cenocepacia J2315 6933479 YP_002231388.1 CDS BCAL2262 NC_011000.1 2507603 2508970 D major facilitator superfamily protein 2507603..2508970 Burkholderia cenocepacia J2315 6932369 YP_002231389.1 CDS BCAL2263 NC_011000.1 2508957 2510003 D putative 6-phosphogluconolactonase 2508957..2510003 Burkholderia cenocepacia J2315 6932370 YP_002231390.1 CDS BCAL2264 NC_011000.1 2510070 2511107 R AraC family regulatory protein complement(2510070..2511107) Burkholderia cenocepacia J2315 6932371 YP_002231391.1 CDS BCAL2265 NC_011000.1 2511400 2512443 D hypothetical protein 2511400..2512443 Burkholderia cenocepacia J2315 6932372 YP_002231392.1 CDS BCAL2266 NC_011000.1 2512473 2513093 R haloacid dehalogenase-like hydrolase complement(2512473..2513093) Burkholderia cenocepacia J2315 6932373 YP_002231393.1 CDS BCAL2267 NC_011000.1 2513217 2514089 R hypothetical protein complement(2513217..2514089) Burkholderia cenocepacia J2315 6932374 YP_002231394.1 CDS BCAL2268 NC_011000.1 2514141 2514851 R putative stress protein complement(2514141..2514851) Burkholderia cenocepacia J2315 6932375 YP_002231395.1 CDS BCAL2269 NC_011000.1 2514897 2515889 R hypothetical protein complement(2514897..2515889) Burkholderia cenocepacia J2315 6932376 YP_002231396.1 CDS BCAL2270 NC_011000.1 2515957 2516697 R hypothetical protein complement(2515957..2516697) Burkholderia cenocepacia J2315 6932377 YP_002231397.1 CDS BCAL2271 NC_011000.1 2516718 2517815 R putative toxic anion resistance protein complement(2516718..2517815) Burkholderia cenocepacia J2315 6932378 YP_002231398.1 CDS BCAL2272 NC_011000.1 2518161 2519498 R hypothetical protein complement(2518161..2519498) Burkholderia cenocepacia J2315 6932379 YP_002231399.1 CDS BCAL2273 NC_011000.1 2519545 2519808 R hypothetical protein complement(2519545..2519808) Burkholderia cenocepacia J2315 6932380 YP_002231400.1 CDS BCAL2274 NC_011000.1 2519818 2521152 R hypothetical protein complement(2519818..2521152) Burkholderia cenocepacia J2315 6932381 YP_002231401.1 CDS BCAL2275 NC_011000.1 2521199 2521462 R hypothetical protein complement(2521199..2521462) Burkholderia cenocepacia J2315 6932382 YP_002231402.1 CDS BCAL2276 NC_011000.1 2521472 2522953 R hypothetical protein complement(2521472..2522953) Burkholderia cenocepacia J2315 6932383 YP_002231403.1 CDS BCAL2277 NC_011000.1 2522950 2525211 R hypothetical protein complement(2522950..2525211) Burkholderia cenocepacia J2315 6932384 YP_002231404.1 CDS BCAL2278 NC_011000.1 2525354 2526613 D Identical to Burkholderia cepacia IS1356 transposase SWALL:Q45111 (EMBL:U44828) (419 aa) fasta scores: E(): 1.2e-169, 100% id in 419 aa; IS1356 transposase 2525354..2526613 Burkholderia cenocepacia J2315 6932387 YP_002231405.1 CDS BCAL2280 NC_011000.1 2529793 2530422 R putative homoserine/homoserine lactone efflux protein complement(2529793..2530422) Burkholderia cenocepacia J2315 6932386 YP_002231406.1 CDS BCAL2281 NC_011000.1 2530770 2532950 D putative ferrichrome receptor 2530770..2532950 Burkholderia cenocepacia J2315 6932388 YP_002231407.1 CDS BCAL2282 NC_011000.1 2533174 2535189 R putative transport related membrane protein complement(2533174..2535189) Burkholderia cenocepacia J2315 6933381 YP_002231408.1 CDS BCAL2283 NC_011000.1 2535193 2535552 R hypothetical protein complement(2535193..2535552) Burkholderia cenocepacia J2315 6932390 YP_002231409.1 CDS acoE NC_011000.1 2535621 2537603 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(2535621..2537603) Burkholderia cenocepacia J2315 6932391 YP_002231410.1 CDS BCAL2285 NC_011000.1 2537923 2538831 D hypothetical protein 2537923..2538831 Burkholderia cenocepacia J2315 6933280 YP_002231411.1 CDS BCAL2286 NC_011000.1 2538944 2539528 D hypothetical protein 2538944..2539528 Burkholderia cenocepacia J2315 6932392 YP_002231412.1 CDS BCAL2287 NC_011000.1 2539573 2541096 D putative fumarate hydratase 2539573..2541096 Burkholderia cenocepacia J2315 6932393 YP_002231413.1 CDS bfr NC_011000.1 2541291 2541767 D bacterioferritin 2541291..2541767 Burkholderia cenocepacia J2315 6932394 YP_002231414.1 CDS BCAL2289 NC_011000.1 2541802 2542659 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 2541802..2542659 Burkholderia cenocepacia J2315 6933409 YP_002231415.1 CDS BCAL2290 NC_011000.1 2542812 2543048 D putative bacterioferritin ferredoxin protein 2542812..2543048 Burkholderia cenocepacia J2315 6932395 YP_002231416.1 CDS BCAL2291 NC_011000.1 2543267 2543998 D TonB family protein 2543267..2543998 Burkholderia cenocepacia J2315 6932396 YP_002231417.1 CDS BCAL2292 NC_011000.1 2544034 2544768 D putative bipolymer transport protein 2544034..2544768 Burkholderia cenocepacia J2315 6932397 YP_002231418.1 CDS BCAL2293 NC_011000.1 2544782 2545210 D putative biopolymer transport protein 2544782..2545210 Burkholderia cenocepacia J2315 6932398 YP_002231419.1 CDS BCAL2294 NC_011000.1 2545616 2546590 R LysR family regulatory protein complement(2545616..2546590) Burkholderia cenocepacia J2315 6932399 YP_002231420.1 CDS BCAL2295 NC_011000.1 2546712 2547584 D putative chromosome condensation protein 2546712..2547584 Burkholderia cenocepacia J2315 6932400 YP_002231421.1 CDS BCAL2296 NC_011000.1 2547623 2548165 D hypothetical protein 2547623..2548165 Burkholderia cenocepacia J2315 6932401 YP_002231422.1 CDS BCAL2297 NC_011000.1 2548306 2548551 D hypothetical protein 2548306..2548551 Burkholderia cenocepacia J2315 6932402 YP_002231423.1 CDS BCAL2298 NC_011000.1 2548828 2550225 R hypothetical protein complement(2548828..2550225) Burkholderia cenocepacia J2315 6932403 YP_002231424.1 CDS BCAL2299 NC_011000.1 2550222 2551064 R putative permease complement(2550222..2551064) Burkholderia cenocepacia J2315 6932404 YP_002231425.1 CDS BCAL2300 NC_011000.1 2551123 2551455 R hypothetical protein complement(2551123..2551455) Burkholderia cenocepacia J2315 6932405 YP_002231426.1 CDS BCAL2301 NC_011000.1 2551511 2552062 R hypothetical protein complement(2551511..2552062) Burkholderia cenocepacia J2315 6932406 YP_002231427.1 CDS uvrB NC_011000.1 2552290 2554380 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(2552290..2554380) Burkholderia cenocepacia J2315 6932407 YP_002231428.1 CDS tyrB NC_011000.1 2554639 2555838 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2554639..2555838 Burkholderia cenocepacia J2315 6934230 YP_002231429.1 CDS BCAL2304 NC_011000.1 2555957 2556745 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(2555957..2556745) Burkholderia cenocepacia J2315 6934211 YP_002231430.1 CDS BCAL2305 NC_011000.1 2556911 2557882 D putative potassium channel subunit 2556911..2557882 Burkholderia cenocepacia J2315 6932408 YP_002231431.1 CDS BCAL2306 NC_011000.1 2557984 2558829 D hypothetical protein 2557984..2558829 Burkholderia cenocepacia J2315 6932409 YP_002231432.1 CDS BCAL2307 NC_011000.1 2558845 2559213 R hypothetical protein complement(2558845..2559213) Burkholderia cenocepacia J2315 6932410 YP_002231433.1 CDS BCAL2308 NC_011000.1 2559327 2559473 R hypothetical protein complement(2559327..2559473) Burkholderia cenocepacia J2315 6932411 YP_002231434.1 CDS BCAL2309 NC_011000.1 2559689 2560093 R putative copper-related MerR family regulatory protein complement(2559689..2560093) Burkholderia cenocepacia J2315 6932412 YP_002231435.1 CDS BCAL2310 NC_011000.1 2560294 2560557 D Highly similar to Burkholderia cepacia insertion element IS407 hypothetical 10.0 kDa protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 1e-31, 98.85% id in 87 aa; transposase 2560294..2560557 Burkholderia cenocepacia J2315 6932413 YP_002231436.1 CDS BCAL2312 NC_011000.1 2567030 2567188 D hypothetical protein 2567030..2567188 Burkholderia cenocepacia J2315 6933382 YP_002231437.1 CDS BCAL2313 NC_011000.1 2567349 2568566 D hypothetical protein 2567349..2568566 Burkholderia cenocepacia J2315 6932416 YP_002231438.1 CDS BCAL2314 NC_011000.1 2568782 2569618 D LuxR superfamily regulatory protein 2568782..2569618 Burkholderia cenocepacia J2315 6932417 YP_002231439.1 CDS BCAL2315 NC_011000.1 2569695 2570369 D hypothetical protein 2569695..2570369 Burkholderia cenocepacia J2315 6932418 YP_002231440.1 CDS BCAL2316 NC_011000.1 2570512 2571168 D hypothetical protein 2570512..2571168 Burkholderia cenocepacia J2315 6932419 YP_002231441.1 CDS BCAL2317 NC_011000.1 2571256 2572410 R family M14 peptidase complement(2571256..2572410) Burkholderia cenocepacia J2315 6932420 YP_002231442.1 CDS BCAL2318 NC_011000.1 2572550 2573332 R hypothetical protein complement(2572550..2573332) Burkholderia cenocepacia J2315 6932421 YP_002231443.1 CDS BCAL2319 NC_011000.1 2573390 2573887 D hypothetical protein 2573390..2573887 Burkholderia cenocepacia J2315 6932422 YP_002231444.1 CDS BCAL2320 NC_011000.1 2573939 2575093 D catalyzes the transfer of an amino moiety; putative aminotransferase 2573939..2575093 Burkholderia cenocepacia J2315 6932423 YP_002231445.1 CDS BCAL2321 NC_011000.1 2575133 2575789 R putative glutathione S-transferase complement(2575133..2575789) Burkholderia cenocepacia J2315 6932424 YP_002231446.1 CDS BCAL2322 NC_011000.1 2575992 2576783 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2575992..2576783 Burkholderia cenocepacia J2315 6932425 YP_002231447.1 CDS BCAL2323 NC_011000.1 2577004 2577696 D putative glutathione S-transferase 2577004..2577696 Burkholderia cenocepacia J2315 6932426 YP_002231448.1 CDS BCAL2324 NC_011000.1 2577744 2578220 R hypothetical protein complement(2577744..2578220) Burkholderia cenocepacia J2315 6932427 YP_002231449.1 CDS BCAL2325 NC_011000.1 2578217 2578678 R hypothetical protein complement(2578217..2578678) Burkholderia cenocepacia J2315 6932428 YP_002231450.1 CDS BCAL2326 NC_011000.1 2578717 2579850 R putative acyl-CoA dehydrogenase family protein complement(2578717..2579850) Burkholderia cenocepacia J2315 6932429 YP_002231451.1 CDS BCAL2327 NC_011000.1 2579870 2581066 R putative acyl-CoA dehydrogenase family protein complement(2579870..2581066) Burkholderia cenocepacia J2315 6932430 YP_002231452.1 CDS BCAL2328 NC_011000.1 2581121 2581543 R hypothetical protein complement(2581121..2581543) Burkholderia cenocepacia J2315 6932431 YP_002231453.1 CDS BCAL2329 NC_011000.1 2581680 2582270 R NUDIX hydrolase complement(2581680..2582270) Burkholderia cenocepacia J2315 6932432 YP_002231454.1 CDS BCAL2330 NC_011000.1 2582310 2582606 R hypothetical protein complement(2582310..2582606) Burkholderia cenocepacia J2315 6932433 YP_002231455.1 CDS nuoN NC_011000.1 2582606 2584072 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N complement(2582606..2584072) Burkholderia cenocepacia J2315 6932434 YP_002231456.1 CDS nuoM NC_011000.1 2584097 2585587 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M complement(2584097..2585587) Burkholderia cenocepacia J2315 6933887 YP_002231457.1 CDS nuoL NC_011000.1 2585604 2587658 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L complement(2585604..2587658) Burkholderia cenocepacia J2315 6933886 YP_002231458.1 CDS nuoK NC_011000.1 2587676 2587981 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K complement(2587676..2587981) Burkholderia cenocepacia J2315 6933885 YP_002231459.1 CDS nuoJ NC_011000.1 2588000 2588650 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J complement(2588000..2588650) Burkholderia cenocepacia J2315 6933884 YP_002231460.1 CDS BCAL2336 NC_011000.1 2588756 2589244 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(2588756..2589244) Burkholderia cenocepacia J2315 6933883 YP_002231461.1 CDS nuoH NC_011000.1 2589255 2590322 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(2589255..2590322) Burkholderia cenocepacia J2315 6932435 YP_002231462.1 CDS BCAL2338 NC_011000.1 2590323 2592653 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G complement(2590323..2592653) Burkholderia cenocepacia J2315 6933882 YP_002231463.1 CDS nuoF NC_011000.1 2592736 2594046 R NADH dehydrogenase I chain F complement(2592736..2594046) Burkholderia cenocepacia J2315 6932436 YP_002231464.1 CDS BCAL2340 NC_011000.1 2594043 2594528 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E complement(2594043..2594528) Burkholderia cenocepacia J2315 6933881 YP_002231465.1 CDS nuoD NC_011000.1 2594701 2595954 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D complement(2594701..2595954) Burkholderia cenocepacia J2315 6932437 YP_002231466.1 CDS nuoC NC_011000.1 2595964 2596566 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C complement(2595964..2596566) Burkholderia cenocepacia J2315 6933880 YP_002231467.1 CDS nuoB NC_011000.1 2596588 2597109 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(2596588..2597109) Burkholderia cenocepacia J2315 6933879 YP_002231468.1 CDS nuoA NC_011000.1 2597130 2597489 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A complement(2597130..2597489) Burkholderia cenocepacia J2315 6933878 YP_002231469.1 CDS secG NC_011000.1 2597839 2598216 R preprotein translocase subunit SecG complement(2597839..2598216) Burkholderia cenocepacia J2315 6933383 YP_002231470.1 CDS tpiA NC_011000.1 2598289 2599044 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(2598289..2599044) Burkholderia cenocepacia J2315 6934142 YP_002231471.1 CDS BCAL2347 NC_011000.1 2599185 2600204 R putative oxidoreductase complement(2599185..2600204) Burkholderia cenocepacia J2315 6934195 YP_002231472.1 CDS pnp NC_011000.1 2600353 2602494 R polynucleotide phosphorylase/polyadenylase complement(2600353..2602494) Burkholderia cenocepacia J2315 6932438 YP_002231473.1 CDS rpsO NC_011000.1 2602791 2603060 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(2602791..2603060) Burkholderia cenocepacia J2315 6933969 YP_002231474.1 CDS BCAL2350 NC_011000.1 2603168 2604493 R putative amino acid transporter exported protein complement(2603168..2604493) Burkholderia cenocepacia J2315 6934114 YP_002231475.1 CDS BCAL2351 NC_011000.1 2604593 2605105 D putative lipoprotein 2604593..2605105 Burkholderia cenocepacia J2315 6932439 YP_002231476.1 CDS BCAL2352 NC_011000.1 2605489 2606130 D putative carbonic anhydrase 2605489..2606130 Burkholderia cenocepacia J2315 6932440 YP_002231477.1 CDS BCAL2353 NC_011000.1 2606171 2607721 D putative sulfate transporter 2606171..2607721 Burkholderia cenocepacia J2315 6932441 YP_002231478.1 CDS leuA NC_011000.1 2607793 2609337 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(2607793..2609337) Burkholderia cenocepacia J2315 6932442 YP_002231479.1 CDS BCAL2355 NC_011000.1 2609661 2610533 R putative phosphatidyltransferase complement(2609661..2610533) Burkholderia cenocepacia J2315 6933784 YP_002231480.1 CDS BCAL2356 NC_011000.1 2610549 2611193 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(2610549..2611193) Burkholderia cenocepacia J2315 6932443 YP_002231481.1 CDS ilvC NC_011000.1 2611321 2612337 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(2611321..2612337) Burkholderia cenocepacia J2315 6932444 YP_002231482.1 CDS ilvH NC_011000.1 2612443 2612934 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(2612443..2612934) Burkholderia cenocepacia J2315 6933751 YP_002231483.1 CDS ilvI NC_011000.1 2613046 2614809 R acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit complement(2613046..2614809) Burkholderia cenocepacia J2315 6933755 YP_002231484.1 CDS BCAL2360 NC_011000.1 2615164 2615727 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 2615164..2615727 Burkholderia cenocepacia J2315 6933756 YP_002231485.1 CDS BCAL2361 NC_011000.1 2615724 2616143 D hypothetical protein 2615724..2616143 Burkholderia cenocepacia J2315 6932445 YP_002231486.1 CDS BCAL2362 NC_011000.1 2616209 2616937 D hypothetical protein 2616209..2616937 Burkholderia cenocepacia J2315 6932446 YP_002231487.1 CDS BCAL2363 NC_011000.1 2616944 2617450 D hypothetical protein 2616944..2617450 Burkholderia cenocepacia J2315 6932447 YP_002231488.1 CDS BCAL2364 NC_011000.1 2617677 2618615 D hypothetical protein 2617677..2618615 Burkholderia cenocepacia J2315 6932448 YP_002231489.1 CDS BCAL2365 NC_011000.1 2618644 2619678 D putative glycosyltransferase 2618644..2619678 Burkholderia cenocepacia J2315 6932449 YP_002231490.1 CDS BCAL2366 NC_011000.1 2619675 2620208 D putative kinase 2619675..2620208 Burkholderia cenocepacia J2315 6932450 YP_002231491.1 CDS BCAL2367 NC_011000.1 2620410 2621168 D TetR family regulatory protein 2620410..2621168 Burkholderia cenocepacia J2315 6932451 YP_002231492.1 CDS BCAL2368 NC_011000.1 2621165 2621746 D putative decarboxylase 2621165..2621746 Burkholderia cenocepacia J2315 6932452 YP_002231493.1 CDS BCAL2369 NC_011000.1 2621769 2622530 D Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase 2621769..2622530 Burkholderia cenocepacia J2315 6932453 YP_002231494.1 CDS BCAL2370 NC_011000.1 2622759 2624651 D hypothetical protein 2622759..2624651 Burkholderia cenocepacia J2315 6932454 YP_002231495.1 CDS BCAL2371 NC_011000.1 2624823 2625440 R hypothetical protein complement(2624823..2625440) Burkholderia cenocepacia J2315 6932455 YP_002231496.1 CDS BCAL2372 NC_011000.1 2625437 2626168 R putative alanyl-tRNA synthetase complement(2625437..2626168) Burkholderia cenocepacia J2315 6932456 YP_002231497.1 CDS BCAL2373 NC_011000.1 2626278 2626688 R putative globin complement(2626278..2626688) Burkholderia cenocepacia J2315 6932457 YP_002231498.1 CDS BCAL2374 NC_011000.1 2626732 2629347 R permease complement(2626732..2629347) Burkholderia cenocepacia J2315 6932458 YP_002231499.1 CDS BCAL2375 NC_011000.1 2629344 2630048 R hypothetical protein complement(2629344..2630048) Burkholderia cenocepacia J2315 6932459 YP_002231500.1 CDS sugE NC_011000.1 2630179 2630499 R quaternary ammonium compound-resistance protein SugE complement(2630179..2630499) Burkholderia cenocepacia J2315 6932460 YP_002231501.1 CDS BCAL2377a NC_011000.1 2630851 2631816 D putative transposase 2630851..2631816 Burkholderia cenocepacia J2315 6934161 YP_002231502.1 CDS BCAL2378 NC_011000.1 2631833 2632114 R hypothetical protein complement(2631833..2632114) Burkholderia cenocepacia J2315 6932461 YP_002231503.1 CDS kdpE NC_011000.1 2632267 2632965 R two-component regulatory system, response regulator protein KdpE complement(2632267..2632965) Burkholderia cenocepacia J2315 6932462 YP_002231504.1 CDS kdpD NC_011000.1 2632958 2635801 R two-component regulatory system, sensor kinase protein complement(2632958..2635801) Burkholderia cenocepacia J2315 6933772 YP_002231505.1 CDS kdpC NC_011000.1 2635954 2636535 R One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C complement(2635954..2636535) Burkholderia cenocepacia J2315 6933771 YP_002231506.1 CDS kdpB NC_011000.1 2636561 2638645 R One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B complement(2636561..2638645) Burkholderia cenocepacia J2315 6933770 YP_002231507.1 CDS kdpA NC_011000.1 2638700 2640505 R catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A complement(2638700..2640505) Burkholderia cenocepacia J2315 6933769 YP_002231508.1 CDS qor NC_011000.1 2640901 2641875 R quinone oxidoreductase complement(2640901..2641875) Burkholderia cenocepacia J2315 6933768 YP_002231509.1 CDS mgsA NC_011000.1 2642048 2642440 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(2642048..2642440) Burkholderia cenocepacia J2315 6934022 YP_002231510.1 CDS BCAL2386 NC_011000.1 2642496 2643275 R putative dehydrogenase complement(2642496..2643275) Burkholderia cenocepacia J2315 6933820 YP_002231511.1 CDS upp NC_011000.1 2643484 2644134 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 2643484..2644134 Burkholderia cenocepacia J2315 6932463 YP_002231512.1 CDS BCAL2388 NC_011000.1 2644353 2645081 D hypothetical protein 2644353..2645081 Burkholderia cenocepacia J2315 6934220 YP_002231513.1 CDS purD NC_011000.1 2645186 2646466 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 2645186..2646466 Burkholderia cenocepacia J2315 6932464 YP_002231514.1 CDS hemF NC_011000.1 2646585 2647508 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2646585..2647508 Burkholderia cenocepacia J2315 6934001 YP_002231515.1 CDS BCAL2391 NC_011000.1 2647592 2648248 D catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP; nicotinic acid mononucleotide adenylyltransferase 2647592..2648248 Burkholderia cenocepacia J2315 6933700 YP_002231516.1 CDS BCAL2392 NC_011000.1 2648253 2648696 D hypothetical protein 2648253..2648696 Burkholderia cenocepacia J2315 6932465 YP_002231517.1 CDS BCAL2393 NC_011000.1 2648715 2649185 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2648715..2649185 Burkholderia cenocepacia J2315 6932466 YP_002231518.1 CDS BCAL2394 NC_011000.1 2649237 2649884 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2649237..2649884 Burkholderia cenocepacia J2315 6932467 YP_002231519.1 CDS cafA NC_011000.1 2649893 2651362 D ribonuclease G 2649893..2651362 Burkholderia cenocepacia J2315 6932468 YP_002231520.1 CDS BCAL2396 NC_011000.1 2651489 2651824 D hypothetical protein 2651489..2651824 Burkholderia cenocepacia J2315 6933421 YP_002231521.1 CDS BCAL2397 NC_011000.1 2652280 2653431 D putative lipoprotein 2652280..2653431 Burkholderia cenocepacia J2315 6932469 YP_002231522.1 CDS BCAL2398 NC_011000.1 2653685 2654650 D putative lipoprotein 2653685..2654650 Burkholderia cenocepacia J2315 6932470 YP_002231523.1 CDS BCAL2399 NC_011000.1 2654647 2655906 D major facilitator superfamily protein 2654647..2655906 Burkholderia cenocepacia J2315 6932471 YP_002231524.1 CDS BCAL2400 NC_011000.1 2655945 2656511 D hypothetical protein 2655945..2656511 Burkholderia cenocepacia J2315 6932472 YP_002231525.1 CDS BCAL2401 NC_011000.1 2656576 2656956 R hypothetical protein complement(2656576..2656956) Burkholderia cenocepacia J2315 6932473 YP_002231526.1 CDS BCAL2402 NC_011000.1 2657099 2657869 D putative LPS biosynthesis-related protein 2657099..2657869 Burkholderia cenocepacia J2315 6932474 YP_002231527.1 CDS BCAL2403 NC_011000.1 2657904 2659088 R putative LPS core biosynthesis protein complement(2657904..2659088) Burkholderia cenocepacia J2315 6932475 YP_002231528.1 CDS BCAL2404 NC_011000.1 2659156 2660397 R putative glycosyltransferase complement(2659156..2660397) Burkholderia cenocepacia J2315 6932476 YP_002231529.1 CDS BCAL2405 NC_011000.1 2660394 2661680 R hypothetical protein complement(2660394..2661680) Burkholderia cenocepacia J2315 6932477 YP_002231530.1 CDS BCAL2406 NC_011000.1 2661677 2662807 R putative glycosyltransferase complement(2661677..2662807) Burkholderia cenocepacia J2315 6932478 YP_002231531.1 CDS BCAL2407 NC_011000.1 2663070 2664134 R putative glycosyltransferase complement(2663070..2664134) Burkholderia cenocepacia J2315 6932479 YP_002231532.1 CDS msbA NC_011000.1 2664167 2665954 R lipid A export ATP-binding/permease MsbA complement(2664167..2665954) Burkholderia cenocepacia J2315 6932480 YP_002231533.1 CDS dnaE NC_011000.1 2665987 2669520 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(2665987..2669520) Burkholderia cenocepacia J2315 6933849 YP_002231534.1 CDS BCAL2410 NC_011000.1 2669737 2670591 D rhodanese superfamily protein 2669737..2670591 Burkholderia cenocepacia J2315 6933506 YP_002231535.1 CDS BCAL2411 NC_011000.1 2670617 2671513 D this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 2670617..2671513 Burkholderia cenocepacia J2315 6932481 YP_002231536.1 CDS rhlE2 NC_011000.1 2671767 2673251 R putative ATP-dependent RNA helicase 2 complement(2671767..2673251) Burkholderia cenocepacia J2315 6932482 YP_002231537.1 CDS BCAL2413 NC_011000.1 2673699 2674079 R hypothetical protein complement(2673699..2674079) Burkholderia cenocepacia J2315 6934035 YP_002231538.1 CDS BCAL2414 NC_011000.1 2674174 2674359 R putative lipoprotein complement(2674174..2674359) Burkholderia cenocepacia J2315 6932483 YP_002231539.1 CDS purT NC_011000.1 2674378 2675592 R non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 complement(2674378..2675592) Burkholderia cenocepacia J2315 6932484 YP_002231540.1 CDS BCAL2416 NC_011000.1 2675859 2676353 D putative lipoprotein 2675859..2676353 Burkholderia cenocepacia J2315 6934008 YP_002231541.1 CDS BCAL2417 NC_011000.1 2676531 2681108 D C-terminus is similar to the C-terminal region of Escherichia coli DNA translocase FtsK UniProt:P46889 (EMBL:AP009048 (1329 aa) fasta scores: E()=8.2e-92, 41.587% id in 1046 aa; putative DNA translocase 2676531..2681108 Burkholderia cenocepacia J2315 6932485 YP_002231542.1 CDS BCAL2418 NC_011000.1 2681206 2682378 R Possible alternative upstream translational start site; hypothetical protein complement(2681206..2682378) Burkholderia cenocepacia J2315 6932486 YP_002231543.1 CDS BCAL2419 NC_011000.1 2682617 2684446 D glycosyl hydrolases family protein 2682617..2684446 Burkholderia cenocepacia J2315 6932487 YP_002231544.1 CDS BCAL2420 NC_011000.1 2684659 2686149 D putative depolymerase/histone-like protein 2684659..2686149 Burkholderia cenocepacia J2315 6932488 YP_002231545.1 CDS BCAL2421 NC_011000.1 2686232 2686756 D putative transposase 2686232..2686756 Burkholderia cenocepacia J2315 6932489 YP_002231546.1 CDS BCAL2422 NC_011000.1 2686756 2687592 D putative transposase 2686756..2687592 Burkholderia cenocepacia J2315 6932490 YP_002231547.1 CDS BCAL2423 NC_011000.1 2687697 2688329 R TetR family regulatory protein complement(2687697..2688329) Burkholderia cenocepacia J2315 6932491 YP_002231548.1 CDS BCAL2424 NC_011000.1 2688582 2689493 D Involved in the electron transport chain; ferredoxin 2688582..2689493 Burkholderia cenocepacia J2315 6932492 YP_002231549.1 CDS nth NC_011000.1 2689490 2690134 D endonuclease III 2689490..2690134 Burkholderia cenocepacia J2315 6932493 YP_002231550.1 CDS BCAL2426 NC_011000.1 2690193 2691122 R hypothetical protein complement(2690193..2691122) Burkholderia cenocepacia J2315 6933876 YP_002231551.1 CDS BCAL2427 NC_011000.1 2691330 2691764 D hypothetical protein 2691330..2691764 Burkholderia cenocepacia J2315 6932494 YP_002231552.1 CDS BCAL2428 NC_011000.1 2691867 2692226 R putative cytochrome C -related protein complement(2691867..2692226) Burkholderia cenocepacia J2315 6932495 YP_002231553.1 CDS BCAL2429 NC_011000.1 2692267 2692626 R putative cytochrome C -related protein complement(2692267..2692626) Burkholderia cenocepacia J2315 6932496 YP_002231554.1 CDS BCAL2430 NC_011000.1 2692854 2693714 D putative ATPase 2692854..2693714 Burkholderia cenocepacia J2315 6932497 YP_002231555.1 CDS BCAL2431 NC_011000.1 2693739 2694914 D hypothetical protein 2693739..2694914 Burkholderia cenocepacia J2315 6932498 YP_002231556.1 CDS BCAL2432 NC_011000.1 2694971 2696182 D putative benzoate membrane transport protein 2694971..2696182 Burkholderia cenocepacia J2315 6932499 YP_002231557.1 CDS talB NC_011000.1 2696351 2697304 D transaldolase B 2696351..2697304 Burkholderia cenocepacia J2315 6932500 YP_002231558.1 CDS BCAL2434 NC_011000.1 2697547 2698002 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 2697547..2698002 Burkholderia cenocepacia J2315 6934165 YP_002231559.1 CDS BCAL2435 NC_011000.1 2698102 2699652 R Na+/solute symporter family protein complement(2698102..2699652) Burkholderia cenocepacia J2315 6932501 YP_002231560.1 CDS BCAL2436 NC_011000.1 2699649 2700083 R Possible alternative translational start site after codon 64; hypothetical protein complement(2699649..2700083) Burkholderia cenocepacia J2315 6932502 YP_002231561.1 CDS BCAL2437 NC_011000.1 2700090 2701007 R hypothetical protein complement(2700090..2701007) Burkholderia cenocepacia J2315 6932503 YP_002231562.1 CDS BCAL2438 NC_011000.1 2701153 2701407 D hypothetical protein 2701153..2701407 Burkholderia cenocepacia J2315 6932504 YP_002231563.1 CDS BCAL2439 NC_011000.1 2701636 2702898 D hypothetical protein 2701636..2702898 Burkholderia cenocepacia J2315 6932505 YP_002231564.1 CDS BCAL2440 NC_011000.1 2702922 2703401 R hypothetical protein complement(2702922..2703401) Burkholderia cenocepacia J2315 6932506 YP_002231565.1 CDS BCAL2441 NC_011000.1 2703401 2703997 R chorismate lyase complement(2703401..2703997) Burkholderia cenocepacia J2315 6932507 YP_002231566.1 CDS htpG NC_011000.1 2704006 2705904 R molecular chaperone; heat shock protein 90 complement(2704006..2705904) Burkholderia cenocepacia J2315 6932508 YP_002231567.1 CDS BCAL2443 NC_011000.1 2706083 2707558 R GntR family regulatory protein complement(2706083..2707558) Burkholderia cenocepacia J2315 6933737 YP_002231568.1 CDS BCAL2444 NC_011000.1 2707774 2708466 D hypothetical protein 2707774..2708466 Burkholderia cenocepacia J2315 6932509 YP_002231569.1 CDS BCAL2445 NC_011000.1 2708521 2709429 D hypothetical protein 2708521..2709429 Burkholderia cenocepacia J2315 6932510 YP_002231570.1 CDS BCAL2446 NC_011000.1 2709581 2710762 D putative aminotransferase 2709581..2710762 Burkholderia cenocepacia J2315 6932511 YP_002231571.1 CDS BCAL2447 NC_011000.1 2710805 2711263 D endoribonuclease L-PSP family protein 2710805..2711263 Burkholderia cenocepacia J2315 6932512 YP_002231572.1 CDS BCAL2448 NC_011000.1 2711277 2712161 D putative phenazine biosynthesis-like protein 2711277..2712161 Burkholderia cenocepacia J2315 6932513 YP_002231573.1 CDS BCAL2449 NC_011000.1 2712345 2714717 D putative cyclic-di-GMP signaling protein 2712345..2714717 Burkholderia cenocepacia J2315 6932514 YP_002231574.1 CDS BCAL2450 NC_011000.1 2714922 2716130 D putative metal transport integral membrane protein 2714922..2716130 Burkholderia cenocepacia J2315 6932515 YP_002231575.1 CDS BCAL2451 NC_011000.1 2716176 2716634 R hypothetical protein complement(2716176..2716634) Burkholderia cenocepacia J2315 6932516 YP_002231576.1 CDS BCAL2452 NC_011000.1 2716735 2717619 D LysR family regulatory protein 2716735..2717619 Burkholderia cenocepacia J2315 6932517 YP_002231577.1 CDS BCAL2453 NC_011000.1 2717673 2718131 R hypothetical protein complement(2717673..2718131) Burkholderia cenocepacia J2315 6932518 YP_002231578.1 CDS parC NC_011000.1 2718393 2720714 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(2718393..2720714) Burkholderia cenocepacia J2315 6932519 YP_002231579.1 CDS parE NC_011000.1 2720784 2722766 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(2720784..2722766) Burkholderia cenocepacia J2315 6933929 YP_002231580.1 CDS BCAL2456 NC_011000.1 2722987 2724936 R ABC transporter ATP-binding protein complement(2722987..2724936) Burkholderia cenocepacia J2315 6933930 YP_002231581.1 CDS BCAL2457 NC_011000.1 2725203 2725607 R hypothetical protein complement(2725203..2725607) Burkholderia cenocepacia J2315 6932520 YP_002231582.1 CDS rubA NC_011000.1 2725806 2725988 D rubredoxin 2725806..2725988 Burkholderia cenocepacia J2315 6932521 YP_002231583.1 CDS BCAL2459 NC_011000.1 2726253 2726969 R putative O-methyltransferase complement(2726253..2726969) Burkholderia cenocepacia J2315 6933384 YP_002231584.1 CDS BCAL2460 NC_011000.1 2727076 2727372 R 4Fe-4S ferredoxin complement(2727076..2727372) Burkholderia cenocepacia J2315 6932522 YP_002231585.1 CDS BCAL2461 NC_011000.1 2727375 2727683 R hypothetical protein complement(2727375..2727683) Burkholderia cenocepacia J2315 6932523 YP_002231586.1 CDS BCAL2462 NC_011000.1 2727696 2728250 R putative RNA polymerase sigma factor complement(2727696..2728250) Burkholderia cenocepacia J2315 6932524 YP_002231587.1 CDS BCAL2463 NC_011000.1 2728753 2729085 D hypothetical protein 2728753..2729085 Burkholderia cenocepacia J2315 6933385 YP_002231588.1 CDS BCAL2464 NC_011000.1 2729138 2729878 R short chain dehydrogenase complement(2729138..2729878) Burkholderia cenocepacia J2315 6932526 YP_002231589.1 CDS BCAL2465 NC_011000.1 2729994 2730617 D TetR family regulatory protein 2729994..2730617 Burkholderia cenocepacia J2315 6932527 YP_002231590.1 CDS eco NC_011000.1 2730639 2731100 R serine protease inhibitor, inhibits trypsin and other proteases; ecotin complement(2730639..2731100) Burkholderia cenocepacia J2315 6932528 YP_002231591.1 CDS BCAL2467 NC_011000.1 2731283 2731609 D putative lipoprotein 2731283..2731609 Burkholderia cenocepacia J2315 6933526 YP_002231592.1 CDS BCAL2468 NC_011000.1 2731808 2732245 R hypothetical protein complement(2731808..2732245) Burkholderia cenocepacia J2315 6932529 YP_002231593.1 CDS BCAL2469 NC_011000.1 2732330 2732710 D hypothetical protein 2732330..2732710 Burkholderia cenocepacia J2315 6932530 YP_002231594.1 CDS BCAL2470 NC_011000.1 2732842 2734263 D major facilitator superfamily protein 2732842..2734263 Burkholderia cenocepacia J2315 6932531 YP_002231595.1 CDS BCAL2471 NC_011000.1 2734294 2734848 R hypothetical protein complement(2734294..2734848) Burkholderia cenocepacia J2315 6932532 YP_002231596.1 CDS otsA NC_011000.1 2734880 2736304 R alpha,alpha-trehalose-phosphate synthase complement(2734880..2736304) Burkholderia cenocepacia J2315 6932533 YP_002231597.1 CDS BCAL2473 NC_011000.1 2736902 2737492 D putative lipoprotein 2736902..2737492 Burkholderia cenocepacia J2315 6933913 YP_002231598.1 CDS BCAL2474 NC_011000.1 2737489 2737983 D putative lipoprotein 2737489..2737983 Burkholderia cenocepacia J2315 6932534 YP_002231599.1 CDS BCAL2475 NC_011000.1 2738517 2738990 R hypothetical protein complement(2738517..2738990) Burkholderia cenocepacia J2315 6932535 YP_002231600.1 CDS BCAL2475a NC_011000.1 2739024 2739275 R hypothetical protein complement(2739024..2739275) Burkholderia cenocepacia J2315 6932536 YP_002231601.1 CDS BCAL2476 NC_011000.1 2739304 2739591 R hypothetical protein complement(2739304..2739591) Burkholderia cenocepacia J2315 6932537 YP_002231602.1 CDS BCAL2476c NC_011000.1 2739842 2740369 R Possible gene remnant; similarity does not extend to the N-terminus and the upstream CDS does not contain a translational stop. Similar to bacteriophage p2 lysozyme K UniProt:P51771 (EMBL:AF063097 (165 aa) fasta scores: E()=8.7e-10, 37.500% id in 144 aa; putative lysozyme complement(2739842..2740369) Burkholderia cenocepacia J2315 6932538 YP_002231603.1 CDS BCAL2478 NC_011000.1 2741643 2742671 D putative integrase 2741643..2742671 Burkholderia cenocepacia J2315 6932541 YP_002231604.1 CDS BCAL2479 NC_011000.1 2742668 2743441 D putative IstB-like ATP binding protein 2742668..2743441 Burkholderia cenocepacia J2315 6932542 YP_002231605.1 CDS BCAL2480b NC_011000.1 2745007 2745824 D transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3'; putative transposase join(2745007..2745360,2745357..2745824) Burkholderia cenocepacia J2315 6932543 YP_002231606.1 CDS BCAL2481 NC_011000.1 2745968 2746234 D hypothetical protein 2745968..2746234 Burkholderia cenocepacia J2315 6932544 YP_002231607.1 CDS BCAL2482 NC_011000.1 2746484 2747656 R putative outer membrane protein complement(2746484..2747656) Burkholderia cenocepacia J2315 6932545 YP_002231608.1 CDS BCAL2483 NC_011000.1 2747653 2749836 R hypothetical protein complement(2747653..2749836) Burkholderia cenocepacia J2315 6932546 YP_002231609.1 CDS BCAL2484 NC_011000.1 2749853 2750452 R hypothetical protein complement(2749853..2750452) Burkholderia cenocepacia J2315 6932547 YP_002231610.1 CDS BCAL2485 NC_011000.1 2750449 2751822 R putative iron-sulphur cluster binding electron transport protein complement(2750449..2751822) Burkholderia cenocepacia J2315 6932548 YP_002231611.1 CDS BCAL2486 NC_011000.1 2751819 2752550 R putative iron-sulphur oxidoreductase complement(2751819..2752550) Burkholderia cenocepacia J2315 6932549 YP_002231612.1 CDS dld NC_011000.1 2752619 2754367 R component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase complement(2752619..2754367) Burkholderia cenocepacia J2315 6932550 YP_002231613.1 CDS BCAL2488 NC_011000.1 2754737 2755648 R LysR family regulatory protein complement(2754737..2755648) Burkholderia cenocepacia J2315 6933503 YP_002231614.1 CDS BCAL2489 NC_011000.1 2755952 2756815 R putative NAD-binding dehydrogenase complement(2755952..2756815) Burkholderia cenocepacia J2315 6932551 YP_002231615.1 CDS BCAL2490 NC_011000.1 2757141 2757803 D LysR family regulatory protein 2757141..2757803 Burkholderia cenocepacia J2315 6932552 YP_002231616.1 CDS BCAL2491 NC_011000.1 2757927 2758262 D hypothetical protein 2757927..2758262 Burkholderia cenocepacia J2315 6932553 YP_002231617.1 CDS BCAL2492 NC_011000.1 2758319 2758915 D putative transport permease 2758319..2758915 Burkholderia cenocepacia J2315 6932554 YP_002231618.1 CDS BCAL2493 NC_011000.1 2758985 2759767 D hypothetical protein 2758985..2759767 Burkholderia cenocepacia J2315 6932555 YP_002231619.1 CDS BCAL2494 NC_011000.1 2759796 2760248 D hypothetical protein 2759796..2760248 Burkholderia cenocepacia J2315 6932556 YP_002231620.1 CDS BCAL2495 NC_011000.1 2760265 2761023 D hypothetical protein 2760265..2761023 Burkholderia cenocepacia J2315 6932557 YP_002231621.1 CDS BCAL2498 NC_011000.1 2761904 2763163 R transposase complement(2761904..2763163) Burkholderia cenocepacia J2315 6932559 YP_002231622.1 CDS BCAL2499 NC_011000.1 2763339 2764562 R CDS is extended at the C-terminus in comparison to orthologues, and the translation extends into an IS elementinserted after codon 395; hypothetical protein complement(2763339..2764562) Burkholderia cenocepacia J2315 6932560 YP_002231623.1 CDS BCAL2500 NC_011000.1 2765321 2765806 R hypothetical protein complement(2765321..2765806) Burkholderia cenocepacia J2315 6932561 YP_002231624.1 CDS BCAL2501 NC_011000.1 2765810 2767567 R hypothetical protein complement(2765810..2767567) Burkholderia cenocepacia J2315 6932562 YP_002231625.1 CDS BCAL2502 NC_011000.1 2767560 2768903 R hypothetical protein complement(2767560..2768903) Burkholderia cenocepacia J2315 6932563 YP_002231626.1 CDS BCAL2503 NC_011000.1 2768914 2770392 R Similar to the C-terminus of Pseudomonas aeruginosa hypothetical protein Pa0095 pa0095 SWALL:Q9I737 (EMBL:AE004448) (741 aa) fasta scores: E(): 6.3e-65, 43.78% id in 475 aa; hypothetical protein complement(2768914..2770392) Burkholderia cenocepacia J2315 6932564 YP_002231627.1 CDS BCAL2504 NC_011000.1 2770768 2771340 R hypothetical protein complement(2770768..2771340) Burkholderia cenocepacia J2315 6932565 YP_002231628.1 CDS BCAL2505 NC_011000.1 2771362 2771742 R hypothetical protein complement(2771362..2771742) Burkholderia cenocepacia J2315 6932566 YP_002231629.1 CDS BCAL2506 NC_011000.1 2771781 2772884 R Similar to the C-terminus of Ralstonia solanacearum hypothetical protein rsc3216 or rs02433 SWALL:Q8XUH2 (EMBL:AL646074) (555 aa) fasta scores: E(): 3e-57, 47.1% id in 363 aa; hypothetical protein complement(2771781..2772884) Burkholderia cenocepacia J2315 6932567 YP_002231630.1 CDS BCAL2506a NC_011000.1 2773130 2773894 D C-terminus is similar to Pseudomonas putida hypothetical protein pp2497 SWALL:Q88JZ6 (EMBL:AE016783) (109 aa) fasta scores: E(): 9.5e-11, 46.07% id in 102 aa; hypothetical protein 2773130..2773894 Burkholderia cenocepacia J2315 6932568 YP_002231631.1 CDS BCAL2507 NC_011000.1 2774012 2774980 D hypothetical protein 2774012..2774980 Burkholderia cenocepacia J2315 6932569 YP_002231632.1 CDS BCAL2509 NC_011000.1 2775248 2776243 D hypothetical protein 2775248..2776243 Burkholderia cenocepacia J2315 6932570 YP_002231633.1 CDS BCAL2510 NC_011000.1 2776255 2776470 D hypothetical protein 2776255..2776470 Burkholderia cenocepacia J2315 6932571 YP_002231634.1 CDS BCAL2511 NC_011000.1 2776522 2777436 D hypothetical protein 2776522..2777436 Burkholderia cenocepacia J2315 6932572 YP_002231635.1 CDS BCAL2512 NC_011000.1 2777433 2778560 D no significant database hits; hypothetical protein 2777433..2778560 Burkholderia cenocepacia J2315 6932573 YP_002231636.1 CDS BCAL2513 NC_011000.1 2778626 2779432 D cosnerved hypothetical protein 2778626..2779432 Burkholderia cenocepacia J2315 6932574 YP_002231637.1 CDS BCAL2514 NC_011000.1 2779535 2779834 D hypothetical protein 2779535..2779834 Burkholderia cenocepacia J2315 6932575 YP_002231638.1 CDS BCAL2515 NC_011000.1 2779836 2780474 D hypothetical protein 2779836..2780474 Burkholderia cenocepacia J2315 6932576 YP_002231639.1 CDS BCAL2516 NC_011000.1 2780674 2780970 R hypothetical protein complement(2780674..2780970) Burkholderia cenocepacia J2315 6932577 YP_002231640.1 CDS BCAL2517 NC_011000.1 2781146 2781697 R hypothetical protein complement(2781146..2781697) Burkholderia cenocepacia J2315 6932578 YP_002231641.1 CDS BCAL2518 NC_011000.1 2782009 2782338 R putative DNA-binding protein complement(2782009..2782338) Burkholderia cenocepacia J2315 6932579 YP_002231642.1 CDS BCAL2519 NC_011000.1 2782539 2784548 D putative O-antigen acetylase 2782539..2784548 Burkholderia cenocepacia J2315 6932580 YP_002231643.1 CDS BCAL2520 NC_011000.1 2784740 2786494 D putative lipoprotein 2784740..2786494 Burkholderia cenocepacia J2315 6932581 YP_002231644.1 CDS BCAL2522 NC_011000.1 2788780 2789571 D DsbA-thioredoxin family protein 2788780..2789571 Burkholderia cenocepacia J2315 6932583 YP_002231645.1 CDS BCAL2523 NC_011000.1 2790139 2791041 R LysR family regulatory protein complement(2790139..2791041) Burkholderia cenocepacia J2315 6932584 YP_002231646.1 CDS BCAL2523A NC_011000.1 2791561 2791929 R hypothetical protein complement(2791561..2791929) Burkholderia cenocepacia J2315 6932585 YP_002231647.1 CDS BCAL2524 NC_011000.1 2792132 2793088 D AraC family regulatory protein 2792132..2793088 Burkholderia cenocepacia J2315 6932586 YP_002231648.1 CDS opdE NC_011000.1 2793364 2794530 R major facilitator superfamily protein complement(2793364..2794530) Burkholderia cenocepacia J2315 6932587 YP_002231649.1 CDS BCAL2526a NC_011000.1 2795239 2795604 R MerR family regulatory protein complement(2795239..2795604) Burkholderia cenocepacia J2315 6932588 YP_002231650.1 CDS BCAL2527 NC_011000.1 2795694 2796602 D family S33 serine peptidase; putative hydrolase 2795694..2796602 Burkholderia cenocepacia J2315 6932589 YP_002231651.1 CDS BCAL2528 NC_011000.1 2796625 2797563 D putative hydrolase 2796625..2797563 Burkholderia cenocepacia J2315 6932590 YP_002231652.1 CDS BCAL2529 NC_011000.1 2797870 2798769 R LysR family regulatory protein complement(2797870..2798769) Burkholderia cenocepacia J2315 6932591 YP_002231653.1 CDS BCAL2530 NC_011000.1 2798869 2799261 D hypothetical protein 2798869..2799261 Burkholderia cenocepacia J2315 6932592 YP_002231654.1 CDS BCAL2531 NC_011000.1 2799303 2799473 D hypothetical protein 2799303..2799473 Burkholderia cenocepacia J2315 6932593 YP_002231655.1 CDS BCAL2532 NC_011000.1 2799504 2799716 D hypothetical protein 2799504..2799716 Burkholderia cenocepacia J2315 6932594 YP_002231656.1 CDS BCAL2534 NC_011000.1 2800484 2800747 D transposase 2800484..2800747 Burkholderia cenocepacia J2315 6932595 YP_002231657.1 CDS BCAL2536A NC_011000.1 2802193 2802981 R family S33 serine peptidase; Possible gene remnant. Similar to the N-terminal region of Burkholderia xenovorans (strain LB400) putative hydrolase UniProt:Q13RJ2 (EMBL:CP000271 (387 aa) fasta scores: E()=1.1e-51, 59.004% id in 261 aa, and to the full length Streptomyces avermitilis putative hydrolase UniProt:Q82QJ4 (EMBL:BA000030 (266 aa) fasta scores: E()=2.5e-38, 48.047% id in 256 aa; putative hydrolase complement(2802193..2802981) Burkholderia cenocepacia J2315 6932598 YP_002231658.1 CDS BCAL2537 NC_011000.1 2803111 2804037 D LysR family regulatory protein 2803111..2804037 Burkholderia cenocepacia J2315 6932599 YP_002231659.1 CDS BCAL2538 NC_011000.1 2804179 2804754 R TetR family regulatory protein complement(2804179..2804754) Burkholderia cenocepacia J2315 6932600 YP_002231660.1 CDS BCAL2539 NC_011000.1 2804840 2805508 R putative glutathione-S-transferase complement(2804840..2805508) Burkholderia cenocepacia J2315 6932601 YP_002231661.1 CDS BCAL2540 NC_011000.1 2806055 2806948 R LysR family regulatory protein complement(2806055..2806948) Burkholderia cenocepacia J2315 6932602 YP_002231662.1 CDS BCAL2541 NC_011000.1 2807052 2807930 D putative hydrolase 2807052..2807930 Burkholderia cenocepacia J2315 6932603 YP_002231663.1 CDS leuC2 NC_011000.1 2807949 2809367 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2807949..2809367 Burkholderia cenocepacia J2315 6932604 YP_002231664.1 CDS leuD2 NC_011000.1 2809364 2809999 D 3-isopropylmalate dehydratase small subunit 2 2809364..2809999 Burkholderia cenocepacia J2315 6933785 YP_002231665.1 CDS BCAL2544 NC_011000.1 2810152 2810769 D TetR family regulatory protein 2810152..2810769 Burkholderia cenocepacia J2315 6933786 YP_002231666.1 CDS BCAL2545 NC_011000.1 2810917 2812143 D major facilitator superfamily protein 2810917..2812143 Burkholderia cenocepacia J2315 6932605 YP_002231667.1 CDS BCAL2547a NC_011000.1 2812878 2813315 D hypothetical protein 2812878..2813315 Burkholderia cenocepacia J2315 6932608 YP_002231668.1 CDS BCAL2550 NC_011000.1 2814227 2815624 D hypothetical protein 2814227..2815624 Burkholderia cenocepacia J2315 6932610 YP_002231669.1 CDS BCAL2551 NC_011000.1 2815621 2815971 D hypothetical protein 2815621..2815971 Burkholderia cenocepacia J2315 6932611 YP_002231670.1 CDS BCAL2552 NC_011000.1 2815985 2817502 D hypothetical protein 2815985..2817502 Burkholderia cenocepacia J2315 6932612 YP_002231671.1 CDS BCAL2553 NC_011000.1 2817520 2817897 R hypothetical protein complement(2817520..2817897) Burkholderia cenocepacia J2315 6932613 YP_002231672.1 CDS BCAL2554 NC_011000.1 2817953 2818366 R hypothetical protein complement(2817953..2818366) Burkholderia cenocepacia J2315 6932614 YP_002231673.1 CDS BCAL2555 NC_011000.1 2818366 2818584 R hypothetical protein complement(2818366..2818584) Burkholderia cenocepacia J2315 6932615 YP_002231674.1 CDS BCAL2556 NC_011000.1 2818916 2820712 D putative helicase 2818916..2820712 Burkholderia cenocepacia J2315 6932616 YP_002231675.1 CDS BCAL2557 NC_011000.1 2820777 2821295 R hypothetical protein complement(2820777..2821295) Burkholderia cenocepacia J2315 6932617 YP_002231676.1 CDS BCAL2558 NC_011000.1 2821292 2822215 R putative pyridine nucleotide-disulphide oxidoreductase complement(2821292..2822215) Burkholderia cenocepacia J2315 6932618 YP_002231677.1 CDS BCAL2559 NC_011000.1 2822212 2822745 R putative transcriptional regulator complement(2822212..2822745) Burkholderia cenocepacia J2315 6932619 YP_002231678.1 CDS BCAL2560 NC_011000.1 2822782 2823066 R putative DNA-binding protein complement(2822782..2823066) Burkholderia cenocepacia J2315 6932620 YP_002231679.1 CDS BCAL2561 NC_011000.1 2823186 2823809 D LysR family regulatory protein 2823186..2823809 Burkholderia cenocepacia J2315 6932621 YP_002231680.1 CDS BCAL2563 NC_011000.1 2824402 2825151 R putative IstB-like insertion sequence protein complement(2824402..2825151) Burkholderia cenocepacia J2315 6932623 YP_002231681.1 CDS BCAL2564 NC_011000.1 2825168 2826724 R putative transposase for insertion sequence IS408 complement(2825168..2826724) Burkholderia cenocepacia J2315 6932624 YP_002231682.1 CDS BCAL2565 NC_011000.1 2827324 2827839 D hypothetical protein 2827324..2827839 Burkholderia cenocepacia J2315 6932625 YP_002231683.1 CDS BCAL2566 NC_011000.1 2827887 2828669 D hypothetical protein 2827887..2828669 Burkholderia cenocepacia J2315 6932626 YP_002231684.1 CDS BCAL2567 NC_011000.1 2828756 2829544 D hypothetical protein 2828756..2829544 Burkholderia cenocepacia J2315 6932627 YP_002231685.1 CDS BCAL2569 NC_011000.1 2830207 2830980 D Possible alternative downstream translational start sites; hypothetical protein 2830207..2830980 Burkholderia cenocepacia J2315 6932629 YP_002231686.1 CDS BCAL2570 NC_011000.1 2831183 2832142 D AraC family regulatory protein 2831183..2832142 Burkholderia cenocepacia J2315 6932630 YP_002231687.1 CDS BCAL2571 NC_011000.1 2832265 2832831 D carboxymuconolactone decarboxylase family protein 2832265..2832831 Burkholderia cenocepacia J2315 6932631 YP_002231688.1 CDS BCAL2572 NC_011000.1 2832804 2833919 D hypothetical protein 2832804..2833919 Burkholderia cenocepacia J2315 6932632 YP_002231689.1 CDS BCAL2573 NC_011000.1 2833916 2834710 D ABC transporter ATP-binding protein 2833916..2834710 Burkholderia cenocepacia J2315 6932633 YP_002231690.1 CDS BCAL2576 NC_011000.1 2835905 2836732 D putative transmembrane protein of ABC transporter 2835905..2836732 Burkholderia cenocepacia J2315 6932635 YP_002231691.1 CDS BCAL2577 NC_011000.1 2837024 2837785 R DJ-1/PfpI family protein complement(2837024..2837785) Burkholderia cenocepacia J2315 6932636 YP_002231692.1 CDS BCAL2578 NC_011000.1 2837872 2838675 R Similar to the N-terminal region of Rhodococcus opacus (Nocardia opaca) 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolacton decarboxylase PcaL UniProt:O67982 (EMBL:AF003947 (400 aa) fasta scores: E()=1.1e-11, 30.739% id in 257 aa; family S33 serine peptidase; putative hydrolase complement(2837872..2838675) Burkholderia cenocepacia J2315 6932637 YP_002231693.1 CDS BCAL2579 NC_011000.1 2838836 2839753 D LysR family regulatory protein 2838836..2839753 Burkholderia cenocepacia J2315 6932638 YP_002231694.1 CDS BCAL2580 NC_011000.1 2839997 2840533 R hypothetical protein complement(2839997..2840533) Burkholderia cenocepacia J2315 6932639 YP_002231695.1 CDS BCAL2583 NC_011000.1 2841652 2841915 R transposase complement(2841652..2841915) Burkholderia cenocepacia J2315 6932641 YP_002231696.1 CDS BCAL2584 NC_011000.1 2842269 2843060 D metallo-beta-lactamase superfamily protein 2842269..2843060 Burkholderia cenocepacia J2315 6932642 YP_002231697.1 CDS BCAL2585 NC_011000.1 2843804 2844853 D putative nitrilase 2843804..2844853 Burkholderia cenocepacia J2315 6932643 YP_002231698.1 CDS BCAL2586 NC_011000.1 2844905 2845858 R AraC family regulatory protein complement(2844905..2845858) Burkholderia cenocepacia J2315 6932644 YP_002231699.1 CDS BCAL2587 NC_011000.1 2846087 2846962 D putative alcohol dehydrogenase 2846087..2846962 Burkholderia cenocepacia J2315 6932645 YP_002231700.1 CDS BCAL2592 NC_011000.1 2849954 2850217 D transposase 2849954..2850217 Burkholderia cenocepacia J2315 6932649 YP_002231701.1 CDS BCAL2595 NC_011000.1 2853121 2854086 D putative transposase 2853121..2854086 Burkholderia cenocepacia J2315 6932650 YP_002231702.1 CDS BCAL2596 NC_011000.1 2854505 2855974 R hypothetical protein complement(2854505..2855974) Burkholderia cenocepacia J2315 6932651 YP_002231703.1 CDS BCAL2597 NC_011000.1 2856198 2856545 R hypothetical protein complement(2856198..2856545) Burkholderia cenocepacia J2315 6932652 YP_002231704.1 CDS BCAL2598 NC_011000.1 2856609 2856821 R putative DNA-binding protein complement(2856609..2856821) Burkholderia cenocepacia J2315 6932653 YP_002231705.1 CDS BCAL2599 NC_011000.1 2857437 2858378 R hypothetical protein complement(2857437..2858378) Burkholderia cenocepacia J2315 6932654 YP_002231706.1 CDS BCAL2600 NC_011000.1 2858406 2859770 R integrase complement(2858406..2859770) Burkholderia cenocepacia J2315 6932655 YP_002231707.1 CDS BCAL2603 NC_011000.1 2861237 2862994 R binding-protein-dependent transport system protein complement(2861237..2862994) Burkholderia cenocepacia J2315 6932657 YP_002231708.1 CDS BCAL2604 NC_011000.1 2863502 2863768 D hypothetical protein 2863502..2863768 Burkholderia cenocepacia J2315 6932658 YP_002231709.1 CDS BCAL2605 NC_011000.1 2863811 2865127 R two-component regulatory system, sensor kinase protein complement(2863811..2865127) Burkholderia cenocepacia J2315 6932659 YP_002231710.1 CDS BCAL2606 NC_011000.1 2865111 2865836 R two-component regulatory system, response regulator protein complement(2865111..2865836) Burkholderia cenocepacia J2315 6932660 YP_002231711.1 CDS BCAL2607 NC_011000.1 2866061 2866615 D hypothetical protein 2866061..2866615 Burkholderia cenocepacia J2315 6932661 YP_002231712.1 CDS BCAL2608 NC_011000.1 2866685 2867389 R pirin-like protein complement(2866685..2867389) Burkholderia cenocepacia J2315 6932662 YP_002231713.1 CDS hisJ NC_011000.1 2867756 2868538 D periplasmic histidine-binding protein 2867756..2868538 Burkholderia cenocepacia J2315 6932663 YP_002231714.1 CDS hisQ NC_011000.1 2868768 2869457 D histidine transport system permease 2868768..2869457 Burkholderia cenocepacia J2315 6933717 YP_002231715.1 CDS hisM NC_011000.1 2869454 2870167 D histidine transport system permease 2869454..2870167 Burkholderia cenocepacia J2315 6933723 YP_002231716.1 CDS hisP NC_011000.1 2870186 2870965 D histidine ABC transporter ATP-binding protein 2870186..2870965 Burkholderia cenocepacia J2315 6933719 YP_002231717.1 CDS BCAL2613 NC_011000.1 2871032 2871529 R putative acetyltransferase complement(2871032..2871529) Burkholderia cenocepacia J2315 6933721 YP_002231718.1 CDS BCAL2614 NC_011000.1 2871664 2872590 D LysR family regulatory protein 2871664..2872590 Burkholderia cenocepacia J2315 6932664 YP_002231719.1 CDS BCAL2615 NC_011000.1 2873126 2874214 D putative exported outer membrane porin protein 2873126..2874214 Burkholderia cenocepacia J2315 6932665 YP_002231720.1 CDS glnB2 NC_011000.1 2874360 2874698 R nitrogen regulatory protein P-II 2 complement(2874360..2874698) Burkholderia cenocepacia J2315 6932666 YP_002231721.1 CDS BCAL2617 NC_011000.1 2874782 2876500 R NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(2874782..2876500) Burkholderia cenocepacia J2315 6933639 YP_002231722.1 CDS BCAL2618 NC_011000.1 2876610 2877788 D hypothetical protein 2876610..2877788 Burkholderia cenocepacia J2315 6932667 YP_002231723.1 CDS BCAL2619 NC_011000.1 2877860 2880106 R glycosyl hydrolase family protein complement(2877860..2880106) Burkholderia cenocepacia J2315 6932668 YP_002231724.1 CDS BCAL2620 NC_011000.1 2880258 2881292 D AraC family regulatory protein 2880258..2881292 Burkholderia cenocepacia J2315 6932669 YP_002231725.1 CDS BCAL2621 NC_011000.1 2881342 2882211 D hypothetical protein 2881342..2882211 Burkholderia cenocepacia J2315 6932670 YP_002231726.1 CDS ppa NC_011000.1 2882266 2882793 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(2882266..2882793) Burkholderia cenocepacia J2315 6932671 YP_002231727.1 CDS BCAL2623 NC_011000.1 2883031 2884470 D putative aldehyde dehydrogenase 2883031..2884470 Burkholderia cenocepacia J2315 6933981 YP_002231728.1 CDS fabG NC_011000.1 2884556 2885314 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 2884556..2885314 Burkholderia cenocepacia J2315 6932672 YP_002231729.1 CDS BCAL2625 NC_011000.1 2885460 2886764 D major facilitator superfamily protein 2885460..2886764 Burkholderia cenocepacia J2315 6932673 YP_002231730.1 CDS BCAL2626 NC_011000.1 2887020 2887433 D putative DNA-binding protein 2887020..2887433 Burkholderia cenocepacia J2315 6932674 YP_002231731.1 CDS BCAL2627 NC_011000.1 2887430 2888656 D family S33 serine peptidase; putative hydrolase 2887430..2888656 Burkholderia cenocepacia J2315 6932675 YP_002231732.1 CDS BCAL2628 NC_011000.1 2888754 2889941 R putative porphyrin biosynthesis related protein complement(2888754..2889941) Burkholderia cenocepacia J2315 6932676 YP_002231733.1 CDS BCAL2629 NC_011000.1 2889944 2891914 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis; bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase complement(2889944..2891914) Burkholderia cenocepacia J2315 6932677 YP_002231734.1 CDS hemC NC_011000.1 2891914 2892918 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(2891914..2892918) Burkholderia cenocepacia J2315 6932678 YP_002231735.1 CDS BCAL2631 NC_011000.1 2893172 2896141 D catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 2893172..2896141 Burkholderia cenocepacia J2315 6933698 YP_002231736.1 CDS BCAL2632 NC_011000.1 2896265 2897017 R putative biotin biosyntehsis related protein complement(2896265..2897017) Burkholderia cenocepacia J2315 6932679 YP_002231737.1 CDS BCAL2633 NC_011000.1 2897236 2898045 D putative DNA-binding protein 2897236..2898045 Burkholderia cenocepacia J2315 6932680 YP_002231738.1 CDS BCAL2634a NC_011000.1 2898053 2899048 R hypothetical protein complement(2898053..2899048) Burkholderia cenocepacia J2315 6932681 YP_002231739.1 CDS BCAL2635 NC_011000.1 2899345 2899881 D hypothetical protein 2899345..2899881 Burkholderia cenocepacia J2315 6932682 YP_002231740.1 CDS BCAL2636 NC_011000.1 2899888 2900598 D putative fimbriae chaperone 2899888..2900598 Burkholderia cenocepacia J2315 6932683 YP_002231741.1 CDS BCAL2637 NC_011000.1 2900669 2903005 D putative fimbriae usher protein 2900669..2903005 Burkholderia cenocepacia J2315 6932684 YP_002231742.1 CDS argH NC_011000.1 2903095 2904504 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2903095..2904504 Burkholderia cenocepacia J2315 6932685 YP_002231743.1 CDS BCAL2639 NC_011000.1 2904601 2905284 D putative hydrolase 2904601..2905284 Burkholderia cenocepacia J2315 6933306 YP_002231744.1 CDS BCAL2640 NC_011000.1 2905363 2906184 R hypothetical protein complement(2905363..2906184) Burkholderia cenocepacia J2315 6932686 YP_002231745.1 CDS BCAL2641 NC_011000.1 2906184 2908463 R putative ornithine decarboxylase complement(2906184..2908463) Burkholderia cenocepacia J2315 6932687 YP_002231746.1 CDS dcd NC_011000.1 2908545 2909114 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(2908545..2909114) Burkholderia cenocepacia J2315 6932688 YP_002231747.1 CDS sodC NC_011000.1 2909310 2909846 R superoxide dismutase SodC complement(2909310..2909846) Burkholderia cenocepacia J2315 6933494 YP_002231748.1 CDS BCAL2644 NC_011000.1 2909980 2911071 R putative ATP-binding protein complement(2909980..2911071) Burkholderia cenocepacia J2315 6934148 YP_002231749.1 CDS BCAL2645 NC_011000.1 2911424 2912071 D putative OmpA family membrane protein 2911424..2912071 Burkholderia cenocepacia J2315 6932689 YP_002231750.1 CDS metG NC_011000.1 2912452 2914608 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2912452..2914608 Burkholderia cenocepacia J2315 6932690 YP_002231751.1 CDS BCAL2647 NC_011000.1 2914701 2918744 R hypothetical protein complement(2914701..2918744) Burkholderia cenocepacia J2315 6933812 YP_002231752.1 CDS BCAL2648 NC_011000.1 2918790 2920604 R putative outer membrane protein complement(2918790..2920604) Burkholderia cenocepacia J2315 6932691 YP_002231753.1 CDS BCAL2649 NC_011000.1 2920821 2921009 D hypothetical protein 2920821..2921009 Burkholderia cenocepacia J2315 6932692 YP_002231754.1 CDS BCAL2650 NC_011000.1 2921014 2921886 D putative chromosome condensation and segregation protein 2921014..2921886 Burkholderia cenocepacia J2315 6932693 YP_002231755.1 CDS panC NC_011000.1 2922157 2922996 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2922157..2922996 Burkholderia cenocepacia J2315 6932694 YP_002231756.1 CDS panD NC_011000.1 2923041 2923427 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 2923041..2923427 Burkholderia cenocepacia J2315 6933927 YP_002231757.1 CDS BCAL2653 NC_011000.1 2923559 2924221 R ParA family ATPase complement(2923559..2924221) Burkholderia cenocepacia J2315 6933928 YP_002231758.1 CDS BCAL2654 NC_011000.1 2924368 2924781 R hypothetical protein complement(2924368..2924781) Burkholderia cenocepacia J2315 6932695 YP_002231759.1 CDS cobQ NC_011000.1 2925151 2926653 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(2925151..2926653) Burkholderia cenocepacia J2315 6932696 YP_002231760.1 CDS BCAL2657 NC_011000.1 2926729 2927283 D putative bifunctional cobalamin biosynthesis protein 2926729..2927283 Burkholderia cenocepacia J2315 6933455 YP_002231761.1 CDS cobD NC_011000.1 2927277 2928221 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 2927277..2928221 Burkholderia cenocepacia J2315 6932697 YP_002231762.1 CDS cobC NC_011000.1 2928214 2929230 D cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; putative threonine-phosphate decarboxylase 2928214..2929230 Burkholderia cenocepacia J2315 6932698 YP_002231763.1 CDS btuF NC_011000.1 2929227 2930144 D putative vitamin B12 transport protein 2929227..2930144 Burkholderia cenocepacia J2315 6933447 YP_002231764.1 CDS BCAL2661 NC_011000.1 2930249 2930833 R phosphoglycerate mutase family complement(2930249..2930833) Burkholderia cenocepacia J2315 6933419 YP_002231765.1 CDS cobS NC_011000.1 2930818 2931570 R catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase complement(2930818..2931570) Burkholderia cenocepacia J2315 6932699 YP_002231766.1 CDS cobT NC_011000.1 2931584 2932639 R catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2931584..2932639) Burkholderia cenocepacia J2315 6932700 YP_002231767.1 CDS BCAL2664 NC_011000.1 2932701 2933516 R ABC transporter ATP-binding protein complement(2932701..2933516) Burkholderia cenocepacia J2315 6932701 YP_002231768.1 CDS BCAL2665 NC_011000.1 2933513 2934508 R putative transmembrane ABC transporter permease complement(2933513..2934508) Burkholderia cenocepacia J2315 6932702 YP_002231769.1 CDS BCAL2666 NC_011000.1 2935062 2935412 D hypothetical protein 2935062..2935412 Burkholderia cenocepacia J2315 6933386 YP_002231770.1 CDS BCAL2667 NC_011000.1 2935409 2935723 D cell division protein ZapA 2935409..2935723 Burkholderia cenocepacia J2315 6932704 YP_002231771.1 CDS BCAL2668 NC_011000.1 2936298 2936759 D hypothetical protein 2936298..2936759 Burkholderia cenocepacia J2315 6932705 YP_002231772.1 CDS BCAL2669 NC_011000.1 2936942 2937682 D hypothetical protein 2936942..2937682 Burkholderia cenocepacia J2315 6932706 YP_002231773.1 CDS lgt NC_011000.1 2937806 2938702 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(2937806..2938702) Burkholderia cenocepacia J2315 6932707 YP_002231774.1 CDS BCAL2671 NC_011000.1 2938790 2939704 R LysR family regulatory protein complement(2938790..2939704) Burkholderia cenocepacia J2315 6933789 YP_002231775.1 CDS ilvD NC_011000.1 2939839 2941512 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2939839..2941512 Burkholderia cenocepacia J2315 6932708 YP_002231776.1 CDS BCAL2673 NC_011000.1 2941641 2941967 D putative cytochrome c protein 2941641..2941967 Burkholderia cenocepacia J2315 6933752 YP_002231777.1 CDS BCAL2674 NC_011000.1 2942105 2942860 R hypothetical protein complement(2942105..2942860) Burkholderia cenocepacia J2315 6932709 YP_002231778.1 CDS BCAL2675 NC_011000.1 2942886 2943302 R binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi complement(2942886..2943302) Burkholderia cenocepacia J2315 6932710 YP_002231779.1 CDS pepA NC_011000.1 2943337 2944848 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(2943337..2944848) Burkholderia cenocepacia J2315 6932711 YP_002231780.1 CDS BCAL2677 NC_011000.1 2944971 2946065 D putative permease 2944971..2946065 Burkholderia cenocepacia J2315 6933941 YP_002231781.1 CDS BCAL2678 NC_011000.1 2946069 2947217 D putative permease 2946069..2947217 Burkholderia cenocepacia J2315 6932712 YP_002231782.1 CDS BCAL2679 NC_011000.1 2947245 2947628 D putative cobaltochelatase 2947245..2947628 Burkholderia cenocepacia J2315 6932713 YP_002231783.1 CDS BCAL2680 NC_011000.1 2947710 2948459 R catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase complement(2947710..2948459) Burkholderia cenocepacia J2315 6932714 YP_002231784.1 CDS cysN NC_011000.1 2948520 2949836 R putative sulfate adenylyltransferase subunit 1 complement(2948520..2949836) Burkholderia cenocepacia J2315 6932715 YP_002231785.1 CDS cysD1 NC_011000.1 2949859 2950821 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(2949859..2950821) Burkholderia cenocepacia J2315 6933478 YP_002231786.1 CDS cysH NC_011000.1 2950897 2951649 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(2950897..2951649) Burkholderia cenocepacia J2315 6933473 YP_002231787.1 CDS BCAL2684 NC_011000.1 2951646 2952188 R hypothetical protein complement(2951646..2952188) Burkholderia cenocepacia J2315 6933475 YP_002231788.1 CDS cysI NC_011000.1 2952214 2953893 R putative sulfite reductase complement(2952214..2953893) Burkholderia cenocepacia J2315 6932716 YP_002231789.1 CDS cysB NC_011000.1 2954106 2955047 D transcriptional regulator CysB-like protein 2954106..2955047 Burkholderia cenocepacia J2315 6933476 YP_002231790.1 CDS BCAL2687 NC_011000.1 2955118 2956284 D putative lipoprotein 2955118..2956284 Burkholderia cenocepacia J2315 6933471 YP_002231791.1 CDS BCAL2688 NC_011000.1 2956606 2957508 R LysR family regulatory protein complement(2956606..2957508) Burkholderia cenocepacia J2315 6933387 YP_002231792.1 CDS BCAL2689 NC_011000.1 2957558 2958367 D putative short-chain type dehydrogenase/reductase 2957558..2958367 Burkholderia cenocepacia J2315 6932718 YP_002231793.1 CDS BCAL2690 NC_011000.1 2958411 2959310 D short chain dehydrogenase 2958411..2959310 Burkholderia cenocepacia J2315 6932719 YP_002231794.1 CDS BCAL2691 NC_011000.1 2959341 2960231 R putative hydrolase complement(2959341..2960231) Burkholderia cenocepacia J2315 6932720 YP_002231795.1 CDS BCAL2692 NC_011000.1 2960302 2961234 D LysR family regulatory protein 2960302..2961234 Burkholderia cenocepacia J2315 6932721 YP_002231796.1 CDS BCAL2693 NC_011000.1 2961260 2962195 R LysR family regulatory protein complement(2961260..2962195) Burkholderia cenocepacia J2315 6932722 YP_002231797.1 CDS BCAL2694 NC_011000.1 2962362 2963135 R short chain dehydrogenase complement(2962362..2963135) Burkholderia cenocepacia J2315 6932723 YP_002231798.1 CDS BCAL2695 NC_011000.1 2963316 2963816 R hypothetical protein complement(2963316..2963816) Burkholderia cenocepacia J2315 6932724 YP_002231799.1 CDS BCAL2696 NC_011000.1 2963883 2964257 R putative copper resistance protein complement(2963883..2964257) Burkholderia cenocepacia J2315 6932725 YP_002231800.1 CDS BCAL2697 NC_011000.1 2964373 2965089 D putative ribosomal small subunit pseudouridine synthase A 2964373..2965089 Burkholderia cenocepacia J2315 6932726 YP_002231801.1 CDS BCAL2698 NC_011000.1 2965195 2965383 D hypothetical protein 2965195..2965383 Burkholderia cenocepacia J2315 6932727 YP_002231802.1 CDS BCAL2699 NC_011000.1 2965366 2966403 R NAD dependent epimerase/dehydratase family protein complement(2965366..2966403) Burkholderia cenocepacia J2315 6932728 YP_002231803.1 CDS BCAL2700 NC_011000.1 2966511 2967542 D catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 2966511..2967542 Burkholderia cenocepacia J2315 6932729 YP_002231804.1 CDS argD NC_011000.1 2967835 2969019 D DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 2967835..2969019 Burkholderia cenocepacia J2315 6932730 YP_002231805.1 CDS BCAL2702 NC_011000.1 2969033 2969488 D putative acetyltransferase 2969033..2969488 Burkholderia cenocepacia J2315 6932731 YP_002231806.1 CDS BCAL2703 NC_011000.1 2969506 2970177 R hypothetical protein complement(2969506..2970177) Burkholderia cenocepacia J2315 6932732 YP_002231807.1 CDS BCAL2703a NC_011000.1 2970407 2970931 D putative transposase 2970407..2970931 Burkholderia cenocepacia J2315 6932733 YP_002231808.1 CDS BCAL2704 NC_011000.1 2970931 2971767 D putative transposase 2970931..2971767 Burkholderia cenocepacia J2315 6932734 YP_002231809.1 CDS BCAL2705 NC_011000.1 2971867 2972583 R ABC transporter ATP-binding protein complement(2971867..2972583) Burkholderia cenocepacia J2315 6932735 YP_002231810.1 CDS BCAL2706 NC_011000.1 2972583 2973359 R ABC transporter ATP-binding protein complement(2972583..2973359) Burkholderia cenocepacia J2315 6932736 YP_002231811.1 CDS BCAL2707 NC_011000.1 2973383 2974552 R putative transport system permease complement(2973383..2974552) Burkholderia cenocepacia J2315 6932737 YP_002231812.1 CDS BCAL2708 NC_011000.1 2974572 2975522 R putative amino-acid transport permease complement(2974572..2975522) Burkholderia cenocepacia J2315 6932738 YP_002231813.1 CDS BCAL2709 NC_011000.1 2975734 2976444 R hypothetical protein complement(2975734..2976444) Burkholderia cenocepacia J2315 6932739 YP_002231814.1 CDS ispH NC_011000.1 2976649 2977629 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2976649..2977629) Burkholderia cenocepacia J2315 6932740 YP_002231815.1 CDS BCAL2711 NC_011000.1 2977632 2978087 R putative FkpB-type peptidyl-prolyl cis-trans isomerase complement(2977632..2978087) Burkholderia cenocepacia J2315 6933766 YP_002231816.1 CDS radC NC_011000.1 2978368 2978997 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 2978368..2978997 Burkholderia cenocepacia J2315 6932741 YP_002231817.1 CDS rpmB NC_011000.1 2979235 2979468 D required for 70S ribosome assembly; 50S ribosomal protein L28 2979235..2979468 Burkholderia cenocepacia J2315 6932742 YP_002231818.1 CDS rpmG NC_011000.1 2979486 2979653 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2979486..2979653 Burkholderia cenocepacia J2315 6934082 YP_002231819.1 CDS nadB NC_011000.1 2979822 2981408 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2979822..2981408 Burkholderia cenocepacia J2315 6934088 YP_002231820.1 CDS nadC NC_011000.1 2981504 2982385 R catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase complement(2981504..2982385) Burkholderia cenocepacia J2315 6933869 YP_002231821.1 CDS nadA NC_011000.1 2982382 2983524 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(2982382..2983524) Burkholderia cenocepacia J2315 6933870 YP_002231822.1 CDS BCAL2719 NC_011000.1 2983773 2984969 R putative transmembrane fatty acid desaturase complement(2983773..2984969) Burkholderia cenocepacia J2315 6933868 YP_002231823.1 CDS BCAL2720 NC_011000.1 2985185 2986567 R putative mechanosensitive ion channel protein complement(2985185..2986567) Burkholderia cenocepacia J2315 6932743 YP_002231824.1 CDS BCAL2721 NC_011000.1 2986586 2987851 R NOL1/NOP2/Sun family protein complement(2986586..2987851) Burkholderia cenocepacia J2315 6932744 YP_002231825.1 CDS purN NC_011000.1 2987848 2988510 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(2987848..2988510) Burkholderia cenocepacia J2315 6932745 YP_002231826.1 CDS BCAL2723 NC_011000.1 2988634 2989626 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 2988634..2989626 Burkholderia cenocepacia J2315 6934007 YP_002231827.1 CDS ileS NC_011000.1 2989731 2992568 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2989731..2992568 Burkholderia cenocepacia J2315 6932746 YP_002231828.1 CDS lspA NC_011000.1 2992571 2993071 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2992571..2993071 Burkholderia cenocepacia J2315 6933749 YP_002231829.1 CDS dfp NC_011000.1 2993139 2994350 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2993139..2994350 Burkholderia cenocepacia J2315 6933800 YP_002231830.1 CDS dut NC_011000.1 2994406 2994852 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2994406..2994852 Burkholderia cenocepacia J2315 6933501 YP_002231831.1 CDS BCAL2728 NC_011000.1 2994914 2995684 R hypothetical protein complement(2994914..2995684) Burkholderia cenocepacia J2315 6933523 YP_002231832.1 CDS BCAL2729 NC_011000.1 2995819 2997198 R putative amino acid permease complement(2995819..2997198) Burkholderia cenocepacia J2315 6932747 YP_002231833.1 CDS clpA NC_011000.1 2997302 2999602 R putative ATP-dependent Clp protease ATP-binding subunit complement(2997302..2999602) Burkholderia cenocepacia J2315 6932748 YP_002231834.1 CDS clpS NC_011000.1 2999599 2999913 R involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS complement(2999599..2999913) Burkholderia cenocepacia J2315 6933436 YP_002231835.1 CDS BCAL2732 NC_011000.1 3000459 3000662 D cold shock-like protein 3000459..3000662 Burkholderia cenocepacia J2315 6933440 YP_002231836.1 CDS BCAL2733 NC_011000.1 3000844 3002442 R putative multicopper oxidase complement(3000844..3002442) Burkholderia cenocepacia J2315 6932749 YP_002231837.1 CDS BCAL2734 NC_011000.1 3003031 3003255 D hypothetical protein 3003031..3003255 Burkholderia cenocepacia J2315 6932750 YP_002231838.1 CDS BCAL2735 NC_011000.1 3003379 3005616 R isocitrate dehydrogenase complement(3003379..3005616) Burkholderia cenocepacia J2315 6932751 YP_002231839.1 CDS BCAL2736 NC_011000.1 3005890 3007146 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(3005890..3007146) Burkholderia cenocepacia J2315 6932752 YP_002231840.1 CDS BCAL2737 NC_011000.1 3007424 3008002 D putative pseudouridine synthase 3007424..3008002 Burkholderia cenocepacia J2315 6932753 YP_002231841.1 CDS BCAL2738 NC_011000.1 3008660 3009160 D hypothetical protein 3008660..3009160 Burkholderia cenocepacia J2315 6932754 YP_002231842.1 CDS fusA NC_011000.1 3009400 3011511 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 3009400..3011511 Burkholderia cenocepacia J2315 6932755 YP_002231843.1 CDS hoxN NC_011000.1 3011646 3012689 D high-affinity nickel transport protein 3011646..3012689 Burkholderia cenocepacia J2315 6933616 YP_002231844.1 CDS BCAL2741 NC_011000.1 3012862 3013173 R hypothetical protein complement(3012862..3013173) Burkholderia cenocepacia J2315 6933730 YP_002231845.1 CDS BCAL2743 NC_011000.1 3014513 3015358 R putative aldo/keto reductase family oxidoreductase complement(3014513..3015358) Burkholderia cenocepacia J2315 6932756 YP_002231846.1 CDS BCAL2744 NC_011000.1 3015526 3016272 D GntR family regulatory protein 3015526..3016272 Burkholderia cenocepacia J2315 6932757 YP_002231847.1 CDS BCAL2745 NC_011000.1 3016294 3017691 R putative CoA transferase family protein complement(3016294..3017691) Burkholderia cenocepacia J2315 6932758 YP_002231848.1 CDS BCAL2746 NC_011000.1 3017832 3019064 D putative citrate synthase 3017832..3019064 Burkholderia cenocepacia J2315 6932759 YP_002231849.1 CDS BCAL2746A NC_011000.1 3019037 3019360 R hypothetical protein complement(3019037..3019360) Burkholderia cenocepacia J2315 6932760 YP_002231850.1 CDS BCAL2748 NC_011000.1 3019615 3021051 D major facilitator superfamily protein 3019615..3021051 Burkholderia cenocepacia J2315 6932761 YP_002231851.1 CDS BCAL2749 NC_011000.1 3021219 3022493 D putative diguanylate phosphodiesterase 3021219..3022493 Burkholderia cenocepacia J2315 6932762 YP_002231852.1 CDS BCAL2750 NC_011000.1 3022513 3023118 R putative methyltransferase complement(3022513..3023118) Burkholderia cenocepacia J2315 6932763 YP_002231853.1 CDS BCAL2751 NC_011000.1 3023218 3024273 R catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase complement(3023218..3024273) Burkholderia cenocepacia J2315 6932764 YP_002231854.1 CDS BCAL2752 NC_011000.1 3024266 3024832 R hypothetical protein complement(3024266..3024832) Burkholderia cenocepacia J2315 6932765 YP_002231855.1 CDS BCAL2753 NC_011000.1 3024872 3025579 D putative regulatory protein 3024872..3025579 Burkholderia cenocepacia J2315 6932766 YP_002231856.1 CDS BCAL2754 NC_011000.1 3025677 3026888 D putative chromate transporter protein 3025677..3026888 Burkholderia cenocepacia J2315 6932767 YP_002231857.1 CDS BCAL2755 NC_011000.1 3026959 3027759 R putative integrase complement(3026959..3027759) Burkholderia cenocepacia J2315 6932768 YP_002231858.1 CDS BCAL2756 NC_011000.1 3027783 3028181 R putative transposase complement(3027783..3028181) Burkholderia cenocepacia J2315 6932769 YP_002231859.1 CDS sodB NC_011000.1 3028310 3028888 R superoxide dismutase SodB complement(3028310..3028888) Burkholderia cenocepacia J2315 6932770 YP_002231860.1 CDS xseA NC_011000.1 3029118 3030500 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(3029118..3030500) Burkholderia cenocepacia J2315 6934147 YP_002231861.1 CDS BCAL2759 NC_011000.1 3030950 3031978 D Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 3030950..3031978 Burkholderia cenocepacia J2315 6934269 YP_002231862.1 CDS BCAL2760 NC_011000.1 3031959 3032153 D hypothetical protein 3031959..3032153 Burkholderia cenocepacia J2315 6932771 YP_002231863.1 CDS kdsB NC_011000.1 3032278 3033069 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 3032278..3033069 Burkholderia cenocepacia J2315 6932772 YP_002231864.1 CDS adk NC_011000.1 3033278 3033940 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 3033278..3033940 Burkholderia cenocepacia J2315 6933773 YP_002231865.1 CDS BCAL2763 NC_011000.1 3034199 3035041 R hypothetical protein complement(3034199..3035041) Burkholderia cenocepacia J2315 6933290 YP_002231866.1 CDS BCAL2764 NC_011000.1 3035050 3036600 R MviN-like protein complement(3035050..3036600) Burkholderia cenocepacia J2315 6932773 YP_002231867.1 CDS rpsT NC_011000.1 3036905 3037177 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3036905..3037177 Burkholderia cenocepacia J2315 6932774 YP_002231868.1 CDS BCAL2766 NC_011000.1 3037324 3037656 R hypothetical protein complement(3037324..3037656) Burkholderia cenocepacia J2315 6934120 YP_002231869.1 CDS argF NC_011000.1 3038057 3038986 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 3038057..3038986 Burkholderia cenocepacia J2315 6932775 YP_002231870.1 CDS murB NC_011000.1 3039073 3040116 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(3039073..3040116) Burkholderia cenocepacia J2315 6933305 YP_002231871.1 CDS BCAL2769 NC_011000.1 3040259 3040744 D putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 3040259..3040744 Burkholderia cenocepacia J2315 6933858 YP_002231872.1 CDS BCAL2770 NC_011000.1 3040824 3041465 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY complement(3040824..3041465) Burkholderia cenocepacia J2315 6932776 YP_002231873.1 CDS BCAL2771 NC_011000.1 3041582 3042073 R hypothetical protein complement(3041582..3042073) Burkholderia cenocepacia J2315 6932777 YP_002231874.1 CDS BCAL2772 NC_011000.1 3042388 3043872 D putative AMP-binding enzyme 3042388..3043872 Burkholderia cenocepacia J2315 6932778 YP_002231875.1 CDS xerD NC_011000.1 3043949 3044899 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(3043949..3044899) Burkholderia cenocepacia J2315 6932779 YP_002231876.1 CDS BCAL2774 NC_011000.1 3044896 3045366 R putative methylated-DNA--protein-cysteine methyltransferase complement(3044896..3045366) Burkholderia cenocepacia J2315 6934268 YP_002231877.1 CDS BCAL2775 NC_011000.1 3045432 3046655 R 4Fe-4S ferredoxin complement(3045432..3046655) Burkholderia cenocepacia J2315 6932780 YP_002231878.1 CDS BCAL2776 NC_011000.1 3046673 3047227 D putative hydrolase 3046673..3047227 Burkholderia cenocepacia J2315 6932781 YP_002231879.1 CDS BCAL2777 NC_011000.1 3047221 3048735 D putative N-acetylmuramoyl-L-alanine amidase 3047221..3048735 Burkholderia cenocepacia J2315 6932782 YP_002231880.1 CDS BCAL2778 NC_011000.1 3048781 3049659 R putative permease complement(3048781..3049659) Burkholderia cenocepacia J2315 6932783 YP_002231881.1 CDS BCAL2779 NC_011000.1 3049934 3050815 D pirin-like protein 3049934..3050815 Burkholderia cenocepacia J2315 6932784 YP_002231882.1 CDS BCAL2780 NC_011000.1 3050868 3051716 D putative thioredoxin protein 3050868..3051716 Burkholderia cenocepacia J2315 6932785 YP_002231883.1 CDS BCAL2781 NC_011000.1 3051820 3052608 R ThiF family protein complement(3051820..3052608) Burkholderia cenocepacia J2315 6932786 YP_002231884.1 CDS pdxH NC_011000.1 3052806 3053450 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 3052806..3053450 Burkholderia cenocepacia J2315 6932787 YP_002231885.1 CDS BCAL2783 NC_011000.1 3053572 3054792 D putative cyclopropane-fatty-acyl-phospholipid synthase 3053572..3054792 Burkholderia cenocepacia J2315 6933937 YP_002231886.1 CDS BCAL2784 NC_011000.1 3054816 3056111 D hypothetical protein 3054816..3056111 Burkholderia cenocepacia J2315 6932788 YP_002231887.1 CDS BCAL2785 NC_011000.1 3056134 3056694 R putative peptide methionine sulfoxide reductase complement(3056134..3056694) Burkholderia cenocepacia J2315 6932789 YP_002231888.1 CDS BCAL2786 NC_011000.1 3057214 3058620 D putative selenium-binding protein 3057214..3058620 Burkholderia cenocepacia J2315 6932790 YP_002231889.1 CDS BCAL2787 NC_011000.1 3058617 3059282 D hypothetical protein 3058617..3059282 Burkholderia cenocepacia J2315 6932791 YP_002231890.1 CDS BCAL2788 NC_011000.1 3059563 3060072 D flavin reductase family protein 3059563..3060072 Burkholderia cenocepacia J2315 6932792 YP_002231891.1 CDS BCAL2789 NC_011000.1 3060059 3060559 R AnsC family regulatory protein complement(3060059..3060559) Burkholderia cenocepacia J2315 6932793 YP_002231892.1 CDS BCAL2790 NC_011000.1 3060689 3061330 D putative cyclase 3060689..3061330 Burkholderia cenocepacia J2315 6932794 YP_002231893.1 CDS BCAL2791 NC_011000.1 3061358 3062611 D putative kynureninase 3061358..3062611 Burkholderia cenocepacia J2315 6932795 YP_002231894.1 CDS BCAL2792 NC_011000.1 3062687 3063637 D putative tryptophan 2,3-dioxygenase 3062687..3063637 Burkholderia cenocepacia J2315 6932796 YP_002231895.1 CDS BCAL2793 NC_011000.1 3063658 3065085 R major facilitator superfamily protein complement(3063658..3065085) Burkholderia cenocepacia J2315 6932797 YP_002231896.1 CDS BCAL2794 NC_011000.1 3065322 3066266 R putative ketopantoate reductase complement(3065322..3066266) Burkholderia cenocepacia J2315 6932798 YP_002231897.1 CDS BCAL2795 NC_011000.1 3066281 3067732 R aldehyde dehydrogenase family protein complement(3066281..3067732) Burkholderia cenocepacia J2315 6932799 YP_002231898.1 CDS BCAL2796 NC_011000.1 3067762 3069366 R catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase complement(3067762..3069366) Burkholderia cenocepacia J2315 6932800 YP_002231899.1 CDS BCAL2797 NC_011000.1 3069466 3070377 D LysR family regulatory protein 3069466..3070377 Burkholderia cenocepacia J2315 6932801 YP_002231900.1 CDS dalD NC_011000.1 3070550 3071944 D putative D-arabinitol 4-dehydrogenase 3070550..3071944 Burkholderia cenocepacia J2315 6932802 YP_002231901.1 CDS dalK NC_011000.1 3072049 3073530 D putative carbohydrate kinase 3072049..3073530 Burkholderia cenocepacia J2315 6933486 YP_002231902.1 CDS BCAL2800 NC_011000.1 3073651 3074607 D putative transcriptional regulator 3073651..3074607 Burkholderia cenocepacia J2315 6933487 YP_002231903.1 CDS BCAL2801 NC_011000.1 3074636 3075817 R major facilitator superfamily protein complement(3074636..3075817) Burkholderia cenocepacia J2315 6932803 YP_002231904.1 CDS BCAL2802 NC_011000.1 3075856 3077052 R family S12 serine peptidase; putative esterase complement(3075856..3077052) Burkholderia cenocepacia J2315 6932804 YP_002231905.1 CDS BCAL2803 NC_011000.1 3077166 3078050 D LysR family regulatory protein 3077166..3078050 Burkholderia cenocepacia J2315 6932805 YP_002231906.1 CDS BCAL2804 NC_011000.1 3078065 3079174 R putative sugar ABC transporter ATP-binding protein complement(3078065..3079174) Burkholderia cenocepacia J2315 6932806 YP_002231907.1 CDS BCAL2805 NC_011000.1 3079230 3079928 R putative haloacid dehalogenase hydrolase complement(3079230..3079928) Burkholderia cenocepacia J2315 6932807 YP_002231908.1 CDS BCAL2806 NC_011000.1 3079925 3080776 R putative ABC transporter permease complement(3079925..3080776) Burkholderia cenocepacia J2315 6932808 YP_002231909.1 CDS BCAL2807 NC_011000.1 3080773 3081726 R putative transmembrane ABC transporter protein complement(3080773..3081726) Burkholderia cenocepacia J2315 6932809 YP_002231910.1 CDS BCAL2808 NC_011000.1 3081840 3083165 R putative periplasmic ABC transporter substrate-binding component complement(3081840..3083165) Burkholderia cenocepacia J2315 6932810 YP_002231911.1 CDS BCAL2809 NC_011000.1 3083238 3084590 R putative tagatose 6-phosphate kinase protein complement(3083238..3084590) Burkholderia cenocepacia J2315 6932811 YP_002231912.1 CDS scrK NC_011000.1 3084578 3085534 R putative fructokinase complement(3084578..3085534) Burkholderia cenocepacia J2315 6932812 YP_002231913.1 CDS BCAL2811 NC_011000.1 3085613 3086389 R Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase complement(3085613..3086389) Burkholderia cenocepacia J2315 6934135 YP_002231914.1 CDS BCAL2812 NC_011000.1 3086718 3087179 D putative Fur family transcriptional regulator 3086718..3087179 Burkholderia cenocepacia J2315 6932813 YP_002231915.1 CDS BCAL2813 NC_011000.1 3087224 3088135 D putative periplasmic solute-binding protein 3087224..3088135 Burkholderia cenocepacia J2315 6932814 YP_002231916.1 CDS BCAL2814 NC_011000.1 3088153 3089037 D ABC transporter ATP-binding protein 3088153..3089037 Burkholderia cenocepacia J2315 6932815 YP_002231917.1 CDS BCAL2815 NC_011000.1 3089048 3089812 D putative ABC transporter permease 3089048..3089812 Burkholderia cenocepacia J2315 6932816 YP_002231918.1 CDS BCAL2816 NC_011000.1 3089946 3090794 R family S9 unassigned serine peptidase; S-formylglutathione hydrolase complement(3089946..3090794) Burkholderia cenocepacia J2315 6932817 YP_002231919.1 CDS flhA NC_011000.1 3090811 3091917 R S-(hydroxymethyl)glutathione dehydrogenase complement(3090811..3091917) Burkholderia cenocepacia J2315 6932818 YP_002231920.1 CDS BCAL2818 NC_011000.1 3092132 3093673 R putative sugar kinase protein complement(3092132..3093673) Burkholderia cenocepacia J2315 6933578 YP_002231921.1 CDS BCAL2819 NC_011000.1 3093965 3095413 D putative permease 3093965..3095413 Burkholderia cenocepacia J2315 6932819 YP_002231922.1 CDS oprM NC_011000.1 3095788 3097311 R efflux system outer membrane protein complement(3095788..3097311) Burkholderia cenocepacia J2315 6932820 YP_002231923.1 CDS BCAL2821 NC_011000.1 3097311 3100511 R RND family efflux system transporter protein complement(3097311..3100511) Burkholderia cenocepacia J2315 6933896 YP_002231924.1 CDS bpeA NC_011000.1 3100527 3101801 R efflux system transport protein complement(3100527..3101801) Burkholderia cenocepacia J2315 6932821 YP_002231925.1 CDS bpeR NC_011000.1 3102202 3102843 D TetR family regulatory protein 3102202..3102843 Burkholderia cenocepacia J2315 6933417 YP_002231926.1 CDS BCAL2824 NC_011000.1 3102881 3103558 R isochorismatase family protein complement(3102881..3103558) Burkholderia cenocepacia J2315 6933418 YP_002231927.1 CDS BCAL2825 NC_011000.1 3103711 3104718 D AraC family regulatory protein 3103711..3104718 Burkholderia cenocepacia J2315 6932822 YP_002231928.1 CDS BCAL2826a NC_011000.1 3104770 3105477 R hypothetical protein complement(3104770..3105477) Burkholderia cenocepacia J2315 6932823 YP_002231929.1 CDS BCAL2827 NC_011000.1 3105506 3105925 R hypothetical protein complement(3105506..3105925) Burkholderia cenocepacia J2315 6932824 YP_002231930.1 CDS BCAL2828 NC_011000.1 3105995 3106459 R hypothetical protein complement(3105995..3106459) Burkholderia cenocepacia J2315 6932825 YP_002231931.1 CDS BCAL2829 NC_011000.1 3106541 3108025 R subfamily S1B serine peptidase complement(3106541..3108025) Burkholderia cenocepacia J2315 6932826 YP_002231932.1 CDS BCAL2830 NC_011000.1 3108127 3109473 R two-component regulatory system, sensor kinase protein complement(3108127..3109473) Burkholderia cenocepacia J2315 6932827 YP_002231933.1 CDS BCAL2831 NC_011000.1 3109477 3110139 R two-component regulatory system, response regulator protein complement(3109477..3110139) Burkholderia cenocepacia J2315 6932828 YP_002231934.1 CDS dacB NC_011000.1 3110327 3111850 D family S13 serine peptidase; D-alanyl-D-alanine carboxypeptidase/endopeptidase 3110327..3111850 Burkholderia cenocepacia J2315 6932829 YP_002231935.1 CDS BCAL2833 NC_011000.1 3112183 3113097 D hypothetical protein 3112183..3113097 Burkholderia cenocepacia J2315 6933483 YP_002231936.1 CDS BCAL2834 NC_011000.1 3113193 3114329 D putative acylhydrolase 3113193..3114329 Burkholderia cenocepacia J2315 6932830 YP_002231937.1 CDS BCAL2835 NC_011000.1 3114420 3115448 R hypothetical protein complement(3114420..3115448) Burkholderia cenocepacia J2315 6932831 YP_002231938.1 CDS purK NC_011000.1 3115460 3116656 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(3115460..3116656) Burkholderia cenocepacia J2315 6932832 YP_002231939.1 CDS purE NC_011000.1 3116747 3117268 R phosphoribosylaminoimidazole carboxylase catalytic subunit complement(3116747..3117268) Burkholderia cenocepacia J2315 6934004 YP_002231940.1 CDS purC NC_011000.1 3117285 3118175 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(3117285..3118175) Burkholderia cenocepacia J2315 6934002 YP_002231941.1 CDS cbbA NC_011000.1 3118410 3119474 R class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase complement(3118410..3119474) Burkholderia cenocepacia J2315 6934000 YP_002231942.1 CDS pykA NC_011000.1 3119793 3121229 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(3119793..3121229) Burkholderia cenocepacia J2315 6933425 YP_002231943.1 CDS pgk NC_011000.1 3121514 3122860 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(3121514..3122860) Burkholderia cenocepacia J2315 6934012 YP_002231944.1 CDS BCAL2842 NC_011000.1 3122991 3123314 R putative branched-chain amino acid transport protein complement(3122991..3123314) Burkholderia cenocepacia J2315 6933946 YP_002231945.1 CDS BCAL2843 NC_011000.1 3123311 3124066 R putative branched-chain amino acid transport protein complement(3123311..3124066) Burkholderia cenocepacia J2315 6932833 YP_002231946.1 CDS ilvE NC_011000.1 3124274 3125197 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3124274..3125197 Burkholderia cenocepacia J2315 6932834 YP_002231947.1 CDS BCAL2845 NC_011000.1 3125214 3126179 R putative transposase complement(3125214..3126179) Burkholderia cenocepacia J2315 6933753 YP_002231948.1 CDS BCAL2846 NC_011000.1 3126480 3126983 D hypothetical protein 3126480..3126983 Burkholderia cenocepacia J2315 6932835 YP_002231949.1 CDS BCAL2847 NC_011000.1 3127104 3127913 R subfamily M24A metallo peptidase; putative methionine aminopeptidase complement(3127104..3127913) Burkholderia cenocepacia J2315 6932836 YP_002231950.1 CDS BCAL2848 NC_011000.1 3127910 3128146 R hypothetical protein complement(3127910..3128146) Burkholderia cenocepacia J2315 6932837 YP_002231951.1 CDS BCAL2849 NC_011000.1 3128294 3128914 D putative DNA-binding protein 3128294..3128914 Burkholderia cenocepacia J2315 6932838 YP_002231952.1 CDS BCAL2850 NC_011000.1 3128965 3129513 D acetyltransferase (GNAT) family protein 3128965..3129513 Burkholderia cenocepacia J2315 6932839 YP_002231953.1 CDS BCAL2851 NC_011000.1 3129608 3130540 R Possible alternative translational start site after codon 17; putative hydrolase complement(3129608..3130540) Burkholderia cenocepacia J2315 6932840 YP_002231954.1 CDS BCAL2852 NC_011000.1 3130725 3132203 R putative diguanylate cyclase complement(3130725..3132203) Burkholderia cenocepacia J2315 6932841 YP_002231955.1 CDS pgsA1 NC_011000.1 3133492 3134079 R CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 complement(3133492..3134079) Burkholderia cenocepacia J2315 6933391 YP_002231956.1 CDS BCAL2855 NC_011000.1 3135845 3136810 R transposase complement(3135845..3136810) Burkholderia cenocepacia J2315 6934231 YP_002231957.1 CDS BCAL2857 NC_011000.1 3137463 3138656 D hypothetical protein 3137463..3138656 Burkholderia cenocepacia J2315 6932843 YP_002231958.1 CDS efp1 NC_011000.1 3138794 3139351 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3138794..3139351 Burkholderia cenocepacia J2315 6932844 YP_002231959.1 CDS BCAL2859 NC_011000.1 3139619 3141004 D sigma-54 interacting response regulator protein 3139619..3141004 Burkholderia cenocepacia J2315 6933529 YP_002231960.1 CDS nagZ1 NC_011000.1 3141178 3142206 R hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase complement(3141178..3142206) Burkholderia cenocepacia J2315 6932845 YP_002231961.1 CDS acpS NC_011000.1 3142223 3142657 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(3142223..3142657) Burkholderia cenocepacia J2315 6933871 YP_002231962.1 CDS pdxJ1 NC_011000.1 3142739 3143515 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(3142739..3143515) Burkholderia cenocepacia J2315 6933287 YP_002231963.1 CDS recO NC_011000.1 3143512 3144348 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(3143512..3144348) Burkholderia cenocepacia J2315 6933938 YP_002231964.1 CDS era NC_011000.1 3144335 3145234 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(3144335..3145234) Burkholderia cenocepacia J2315 6934027 YP_002231965.1 CDS rnc1 NC_011000.1 3145295 3146524 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(3145295..3146524) Burkholderia cenocepacia J2315 6933536 YP_002231966.1 CDS lepB1 NC_011000.1 3146678 3147571 R subfamily S26A serine peptidase; signal peptidase I complement(3146678..3147571) Burkholderia cenocepacia J2315 6934049 YP_002231967.1 CDS lepA1 NC_011000.1 3147588 3149381 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(3147588..3149381) Burkholderia cenocepacia J2315 6933782 YP_002231968.1 CDS BCAL2868 NC_011000.1 3149571 3149807 R hypothetical protein complement(3149571..3149807) Burkholderia cenocepacia J2315 6933780 YP_002231969.1 CDS mucD1 NC_011000.1 3149815 3151299 R subfamily S1B serine peptidase; serine protease MucD 1 complement(3149815..3151299) Burkholderia cenocepacia J2315 6932846 YP_002231970.1 CDS mucB1 NC_011000.1 3151316 3152368 R sigma-E factor regulatory protein RseB 1 complement(3151316..3152368) Burkholderia cenocepacia J2315 6933855 YP_002231971.1 CDS rseA1 NC_011000.1 3152374 3153003 R sigma-E factor negative regulatory protein 1 complement(3152374..3153003) Burkholderia cenocepacia J2315 6933853 YP_002231972.1 CDS rpoE1 NC_011000.1 3153078 3153677 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(3153078..3153677) Burkholderia cenocepacia J2315 6934123 YP_002231973.1 CDS BCAL2873 NC_011000.1 3153769 3154233 R hypothetical protein complement(3153769..3154233) Burkholderia cenocepacia J2315 6934094 YP_002231974.1 CDS fabF1 NC_011000.1 3154245 3155477 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II complement(3154245..3155477) Burkholderia cenocepacia J2315 6932847 YP_002231975.1 CDS acpP NC_011000.1 3155642 3155881 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(3155642..3155881) Burkholderia cenocepacia J2315 6933544 YP_002231976.1 CDS fabG NC_011000.1 3156026 3156775 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(3156026..3156775) Burkholderia cenocepacia J2315 6933285 YP_002231977.1 CDS fabD1 NC_011000.1 3156812 3157744 R malonyl CoA-acyl carrier protein transacylase 1 complement(3156812..3157744) Burkholderia cenocepacia J2315 6933546 YP_002231978.1 CDS fabH1 NC_011000.1 3157829 3158818 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III complement(3157829..3158818) Burkholderia cenocepacia J2315 6933542 YP_002231979.1 CDS plsX1 NC_011000.1 3158819 3159925 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(3158819..3159925) Burkholderia cenocepacia J2315 6933548 YP_002231980.1 CDS rpmF NC_011000.1 3160055 3160234 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(3160055..3160234) Burkholderia cenocepacia J2315 6933966 YP_002231981.1 CDS BCAL2881 NC_011000.1 3160333 3160968 R hypothetical protein complement(3160333..3160968) Burkholderia cenocepacia J2315 6934086 YP_002231982.1 CDS BCAL2882 NC_011000.1 3161199 3161831 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 3161199..3161831 Burkholderia cenocepacia J2315 6932848 YP_002231983.1 CDS BCAL2883 NC_011000.1 3161828 3162550 D putative tetrapyrrole methylase 3161828..3162550 Burkholderia cenocepacia J2315 6932849 YP_002231984.1 CDS BCAL2884 NC_011000.1 3162619 3163611 R family S49 serine peptidase complement(3162619..3163611) Burkholderia cenocepacia J2315 6932850 YP_002231985.1 CDS BCAL2885 NC_011000.1 3163624 3164025 R Rieske iron-sulphur protein complement(3163624..3164025) Burkholderia cenocepacia J2315 6932851 YP_002231986.1 CDS BCAL2886 NC_011000.1 3164022 3164681 R haloacid dehalogenase-like hydrolase complement(3164022..3164681) Burkholderia cenocepacia J2315 6932852 YP_002231987.1 CDS rluC1 NC_011000.1 3164687 3165691 R ribosomal large subunit pseudouridine synthase C 1 complement(3164687..3165691) Burkholderia cenocepacia J2315 6932853 YP_002231988.1 CDS rne1 NC_011000.1 3166411 3169575 D ribonuclease E 1 3166411..3169575 Burkholderia cenocepacia J2315 6934043 YP_002231989.1 CDS moaA NC_011000.1 3169706 3170818 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 3169706..3170818 Burkholderia cenocepacia J2315 6934051 YP_002231990.1 CDS mobA NC_011000.1 3170841 3171458 D in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 3170841..3171458 Burkholderia cenocepacia J2315 6933827 YP_002231991.1 CDS moeA1 NC_011000.1 3171570 3172835 D molybdopterin biosynthesis protein MoeA 1 3171570..3172835 Burkholderia cenocepacia J2315 6933833 YP_002231992.1 CDS BCAL2892 NC_011000.1 3172875 3173150 D hypothetical protein 3172875..3173150 Burkholderia cenocepacia J2315 6933834 YP_002231993.1 CDS BCAL2893 NC_011000.1 3173147 3173632 D acetyltransferase (GNAT) family protein 3173147..3173632 Burkholderia cenocepacia J2315 6932854 YP_002231994.1 CDS BCAL2894 NC_011000.1 3173723 3175192 R RmuC family protein complement(3173723..3175192) Burkholderia cenocepacia J2315 6932855 YP_002231995.1 CDS BCAL2895 NC_011000.1 3175195 3176184 R putative 2-ketogluconate reductase complement(3175195..3176184) Burkholderia cenocepacia J2315 6932856 YP_002231996.1 CDS BCAL2896 NC_011000.1 3176266 3177696 R hypothetical protein complement(3176266..3177696) Burkholderia cenocepacia J2315 6932857 YP_002231997.1 CDS BCAL2897 NC_011000.1 3177740 3178402 R hypothetical protein complement(3177740..3178402) Burkholderia cenocepacia J2315 6932858 YP_002231998.1 CDS BCAL2898 NC_011000.1 3178490 3179689 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(3178490..3179689) Burkholderia cenocepacia J2315 6932859 YP_002231999.1 CDS BCAL2899 NC_011000.1 3179959 3180282 D 4Fe-4S ferredoxin 3179959..3180282 Burkholderia cenocepacia J2315 6932860 YP_002232000.1 CDS BCAL2900 NC_011000.1 3180737 3181222 D CreA protein 1 3180737..3181222 Burkholderia cenocepacia J2315 6933393 YP_002232001.1 CDS BCAL2901 NC_011000.1 3181243 3182148 D AraC family regulatory protein 3181243..3182148 Burkholderia cenocepacia J2315 6932862 YP_002232002.1 CDS BCAL2902 NC_011000.1 3182291 3183043 D putative branched-chain amino acid transport protein 3182291..3183043 Burkholderia cenocepacia J2315 6932863 YP_002232003.1 CDS BCAL2903 NC_011000.1 3183040 3183378 D putative branched-chain amino acid transport protein 3183040..3183378 Burkholderia cenocepacia J2315 6932864 YP_002232004.1 CDS BCAL2904 NC_011000.1 3183539 3184321 D hypothetical protein 3183539..3184321 Burkholderia cenocepacia J2315 6932865 YP_002232005.1 CDS BCAL2905 NC_011000.1 3184464 3185009 D hypothetical protein 3184464..3185009 Burkholderia cenocepacia J2315 6932866 YP_002232006.1 CDS BCAL2906 NC_011000.1 3185123 3185341 D hypothetical protein 3185123..3185341 Burkholderia cenocepacia J2315 6932867 YP_002232007.1 CDS norM NC_011000.1 3185478 3186866 D putative multidrug resistance protein 3185478..3186866 Burkholderia cenocepacia J2315 6932868 YP_002232008.1 CDS fumC NC_011000.1 3187061 3188455 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 3187061..3188455 Burkholderia cenocepacia J2315 6933874 YP_002232009.1 CDS BCAL2909 NC_011000.1 3188502 3188996 R long-chain acyl-CoA thioester hydrolase complement(3188502..3188996) Burkholderia cenocepacia J2315 6933613 YP_002232010.1 CDS BCAL2910 NC_011000.1 3189471 3190178 D ArsR family regulatory protein 3189471..3190178 Burkholderia cenocepacia J2315 6932869 YP_002232011.1 CDS BCAL2911 NC_011000.1 3190341 3192869 D proline-rich exported protein 3190341..3192869 Burkholderia cenocepacia J2315 6932870 YP_002232012.1 CDS thyA NC_011000.1 3192969 3193940 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(3192969..3193940) Burkholderia cenocepacia J2315 6932871 YP_002232013.1 CDS BCAL2913 NC_011000.1 3193982 3195379 R sigma-54 interacting regulatory protein complement(3193982..3195379) Burkholderia cenocepacia J2315 6932872 YP_002232014.1 CDS BCAL2914 NC_011000.1 3195882 3196208 D hypothetical protein 3195882..3196208 Burkholderia cenocepacia J2315 6932873 YP_002232015.1 CDS dfrA NC_011000.1 3196499 3196999 D CDS is associated with trimethoprim resistance; dihydrofolate reductase 3196499..3196999 Burkholderia cenocepacia J2315 6932874 YP_002232016.1 CDS BCAL2916 NC_011000.1 3197086 3198456 R microcin-processing peptidase complement(3197086..3198456) Burkholderia cenocepacia J2315 6933502 YP_002232017.1 CDS BCAL2917 NC_011000.1 3198575 3199186 D hypothetical protein 3198575..3199186 Burkholderia cenocepacia J2315 6932875 YP_002232018.1 CDS mogA NC_011000.1 3199203 3199778 D forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 3199203..3199778 Burkholderia cenocepacia J2315 6932876 YP_002232019.1 CDS orn NC_011000.1 3199813 3200433 R 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease complement(3199813..3200433) Burkholderia cenocepacia J2315 6933837 YP_002232020.1 CDS BCAL2920 NC_011000.1 3200559 3201818 D subfamily M48A metallo peptidase; subfamily M48A metalopeptidase 3200559..3201818 Burkholderia cenocepacia J2315 6933911 YP_002232021.1 CDS BCAL2921 NC_011000.1 3201881 3202756 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 3201881..3202756 Burkholderia cenocepacia J2315 6932877 YP_002232022.1 CDS BCAL2922 NC_011000.1 3202821 3203138 D hypothetical protein 3202821..3203138 Burkholderia cenocepacia J2315 6932878 YP_002232023.1 CDS BCAL2923 NC_011000.1 3203216 3204154 R CobD/CbiB family protein complement(3203216..3204154) Burkholderia cenocepacia J2315 6932879 YP_002232024.1 CDS BCAL2924 NC_011000.1 3204275 3204961 R NUDIX hydrolase complement(3204275..3204961) Burkholderia cenocepacia J2315 6932880 YP_002232025.1 CDS rplS NC_011000.1 3205049 3205441 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(3205049..3205441) Burkholderia cenocepacia J2315 6932881 YP_002232026.1 CDS trmD NC_011000.1 3205575 3206369 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(3205575..3206369) Burkholderia cenocepacia J2315 6934074 YP_002232027.1 CDS rimM NC_011000.1 3206371 3207051 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(3206371..3207051) Burkholderia cenocepacia J2315 6934197 YP_002232028.1 CDS rpsP NC_011000.1 3207091 3207345 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(3207091..3207345) Burkholderia cenocepacia J2315 6934042 YP_002232029.1 CDS BCAL2929 NC_011000.1 3207498 3208637 D hypothetical protein 3207498..3208637 Burkholderia cenocepacia J2315 6934115 YP_002232030.1 CDS BCAL2930 NC_011000.1 3208749 3209216 D hypothetical protein 3208749..3209216 Burkholderia cenocepacia J2315 6932882 YP_002232031.1 CDS BCAL2931 NC_011000.1 3209268 3210434 R radical SAM superfamily protein complement(3209268..3210434) Burkholderia cenocepacia J2315 6932883 YP_002232032.1 CDS lrp NC_011000.1 3210537 3211025 R leucine-responsive regulatory protein complement(3210537..3211025) Burkholderia cenocepacia J2315 6932884 YP_002232033.1 CDS dadA NC_011000.1 3211172 3212458 D catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 3211172..3212458 Burkholderia cenocepacia J2315 6933799 YP_002232034.1 CDS etfA NC_011000.1 3212685 3213620 R electron transfer flavoprotein alpha-subunit complement(3212685..3213620) Burkholderia cenocepacia J2315 6933484 YP_002232035.1 CDS etfB NC_011000.1 3213637 3214386 R electron transfer flavoprotein beta-subunit complement(3213637..3214386) Burkholderia cenocepacia J2315 6933538 YP_002232036.1 CDS BCAL2936 NC_011000.1 3214615 3215409 R hypothetical protein complement(3214615..3215409) Burkholderia cenocepacia J2315 6933539 YP_002232037.1 CDS BCAL2937 NC_011000.1 3215438 3216091 R ABC transporter membrane permease complement(3215438..3216091) Burkholderia cenocepacia J2315 6932885 YP_002232038.1 CDS metN NC_011000.1 3216081 3217115 R part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit complement(3216081..3217115) Burkholderia cenocepacia J2315 6932886 YP_002232039.1 CDS BCAL2939 NC_011000.1 3217332 3218240 D family S33 serine peptidase; putative exported monoglyceride lipase 3217332..3218240 Burkholderia cenocepacia J2315 6932887 YP_002232040.1 CDS BCAL2940 NC_011000.1 3218269 3219192 R putative histone deacetylase-family protein complement(3218269..3219192) Burkholderia cenocepacia J2315 6932888 YP_002232041.1 CDS BCAL2941 NC_011000.1 3219362 3220579 D putative exported transglycosylase 3219362..3220579 Burkholderia cenocepacia J2315 6932889 YP_002232042.1 CDS cysM NC_011000.1 3220657 3221559 R catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B complement(3220657..3221559) Burkholderia cenocepacia J2315 6932890 YP_002232043.1 CDS BCAL2943 NC_011000.1 3221769 3222116 R hypothetical protein complement(3221769..3222116) Burkholderia cenocepacia J2315 6933477 YP_002232044.1 CDS hldD NC_011000.1 3222190 3223182 R ADP-l-glycero-D-manno-heptose-6-epimerase complement(3222190..3223182) Burkholderia cenocepacia J2315 6932891 YP_002232045.1 CDS hldA NC_011000.1 3223247 3224197 R Similar to the N-terminal region of Salmonella typhimurium bifunctional protein hldE [Includes: D-beta-D-heptose 7-phosphate kinase; D-beta-D heptose 1-phosphate adenosyltransferase] UniProt:Q7CPR9 (EMBL:AE008847 (477 aa) fasta scores: E()=1.2e-43, 51.634% id in 306 aa; D-beta-D-heptose 7-phosphate kinase complement(3223247..3224197) Burkholderia cenocepacia J2315 6933726 YP_002232046.1 CDS udg NC_011000.1 3224205 3225605 R putative UDP-glucose dehydrogenase complement(3224205..3225605) Burkholderia cenocepacia J2315 6933725 YP_002232047.1 CDS BCAL2947 NC_011000.1 3225696 3226868 R tetratricopeptide repeat protein complement(3225696..3226868) Burkholderia cenocepacia J2315 6934217 YP_002232048.1 CDS BCAL2948 NC_011000.1 3226922 3227215 R hypothetical protein complement(3226922..3227215) Burkholderia cenocepacia J2315 6932892 YP_002232049.1 CDS ihfB NC_011000.1 3227426 3227749 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta complement(3227426..3227749) Burkholderia cenocepacia J2315 6932893 YP_002232050.1 CDS rpsA NC_011000.1 3227772 3229484 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(3227772..3229484) Burkholderia cenocepacia J2315 6933748 YP_002232051.1 CDS cmk NC_011000.1 3229627 3230313 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(3229627..3230313) Burkholderia cenocepacia J2315 6934100 YP_002232052.1 CDS aroA NC_011000.1 3230327 3231631 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(3230327..3231631) Burkholderia cenocepacia J2315 6933442 YP_002232053.1 CDS BCAL2953 NC_011000.1 3231645 3232583 R putative prephenate dehydrogenase complement(3231645..3232583) Burkholderia cenocepacia J2315 6933311 YP_002232054.1 CDS pheA NC_011000.1 3232758 3233840 R bifunctional chorismate mutase/prephenate dehydratase complement(3232758..3233840) Burkholderia cenocepacia J2315 6932894 YP_002232055.1 CDS serC NC_011000.1 3233874 3234956 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(3233874..3234956) Burkholderia cenocepacia J2315 6933956 YP_002232056.1 CDS BCAL2956 NC_011000.1 3235112 3235711 R hypothetical protein complement(3235112..3235711) Burkholderia cenocepacia J2315 6934144 YP_002232057.1 CDS gyrA NC_011000.1 3235795 3238398 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(3235795..3238398) Burkholderia cenocepacia J2315 6932895 YP_002232058.1 CDS ompA NC_011000.1 3238954 3239622 D putative ompA family protein 3238954..3239622 Burkholderia cenocepacia J2315 6933694 YP_002232059.1 CDS ubiG NC_011000.1 3239775 3240473 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3239775..3240473 Burkholderia cenocepacia J2315 6933893 YP_002232060.1 CDS BCAL2960 NC_011000.1 3240487 3241200 D putative phosphatase 3240487..3241200 Burkholderia cenocepacia J2315 6934216 YP_002232061.1 CDS BCAL2961 NC_011000.1 3241751 3242995 D putative integrase 3241751..3242995 Burkholderia cenocepacia J2315 6933394 YP_002232062.1 CDS BCAL2962 NC_011000.1 3243094 3243792 R hypothetical protein complement(3243094..3243792) Burkholderia cenocepacia J2315 6932897 YP_002232063.1 CDS BCAL2962a NC_011000.1 3244061 3244363 D hypothetical protein 3244061..3244363 Burkholderia cenocepacia J2315 6932898 YP_002232064.1 CDS BCAL2962b NC_011000.1 3244347 3245321 D Similar to C-terminus of Ralstonia solanacearum hypothetical protein rsc1870 or rs06006 SWALL:Q8XY93 (EMBL:AL646067) (413 aa) fasta scores: E(): 1.4e-11, 31.72% id in 249 aa; hypothetical protein 3244347..3245321 Burkholderia cenocepacia J2315 6932899 YP_002232065.1 CDS BCAL2963 NC_011000.1 3245525 3245782 D putative phage-related DNA-binding protein 3245525..3245782 Burkholderia cenocepacia J2315 6932900 YP_002232066.1 CDS BCAL2964 NC_011000.1 3245786 3246499 D putative phage-related DNA-binding protein 3245786..3246499 Burkholderia cenocepacia J2315 6932901 YP_002232067.1 CDS BCAL2965 NC_011000.1 3246496 3246786 D hypothetical protein 3246496..3246786 Burkholderia cenocepacia J2315 6932902 YP_002232068.1 CDS BCAL2965a NC_011000.1 3247080 3247280 D hypothetical protein 3247080..3247280 Burkholderia cenocepacia J2315 6932903 YP_002232069.1 CDS BCAL2965b NC_011000.1 3247273 3247512 D hypothetical protein 3247273..3247512 Burkholderia cenocepacia J2315 6932904 YP_002232070.1 CDS BCAL2965C NC_011000.1 3247505 3247780 D hypothetical protein 3247505..3247780 Burkholderia cenocepacia J2315 6932905 YP_002232071.1 CDS BCAL2965D NC_011000.1 3247823 3248131 D hypothetical protein 3247823..3248131 Burkholderia cenocepacia J2315 6932906 YP_002232072.1 CDS BCAL2966 NC_011000.1 3248128 3250932 D hypothetical protein 3248128..3250932 Burkholderia cenocepacia J2315 6932907 YP_002232073.1 CDS BCAL2967 NC_011000.1 3251161 3251499 D hypothetical protein 3251161..3251499 Burkholderia cenocepacia J2315 6932908 YP_002232074.1 CDS BCAL2968 NC_011000.1 3251514 3251723 D hypothetical protein 3251514..3251723 Burkholderia cenocepacia J2315 6932909 YP_002232075.1 CDS BCAL2969 NC_011000.1 3251740 3252765 D hypothetical protein 3251740..3252765 Burkholderia cenocepacia J2315 6932910 YP_002232076.1 CDS BCAL2969a NC_011000.1 3252756 3253013 R hypothetical protein complement(3252756..3253013) Burkholderia cenocepacia J2315 6932911 YP_002232077.1 CDS BCAL2970 NC_011000.1 3253166 3253876 D hypothetical protein 3253166..3253876 Burkholderia cenocepacia J2315 6932912 YP_002232078.1 CDS BCAL2971 NC_011000.1 3253887 3254297 D hypothetical protein 3253887..3254297 Burkholderia cenocepacia J2315 6932913 YP_002232079.1 CDS BCAL2971a NC_011000.1 3254853 3255065 D Similar to N-terminus of Shewanella oneidensis hypothetical protein so4261 SWALL:Q8E9L0 (EMBL:AE015859) (216 aa) fasta scores: E(): 5.9e-05, 56.81% id in 44 aa; hypothetical protein 3254853..3255065 Burkholderia cenocepacia J2315 6932914 YP_002232080.1 CDS BCAL2971b NC_011000.1 3255243 3255455 R hypothetical protein complement(3255243..3255455) Burkholderia cenocepacia J2315 6932915 YP_002232081.1 CDS BCAL2972 NC_011000.1 3255734 3256495 D hypothetical protein 3255734..3256495 Burkholderia cenocepacia J2315 6932916 YP_002232082.1 CDS BCAL2973 NC_011000.1 3256850 3257203 R hypothetical protein complement(3256850..3257203) Burkholderia cenocepacia J2315 6932917 YP_002232083.1 CDS BCAL2974 NC_011000.1 3257551 3257931 R no significant database hits; hypothetical protein complement(3257551..3257931) Burkholderia cenocepacia J2315 6932918 YP_002232084.1 CDS BCAL2975 NC_011000.1 3257921 3259027 R possible regulatory protein complement(3257921..3259027) Burkholderia cenocepacia J2315 6932919 YP_002232085.1 CDS fdsG NC_011000.1 3259159 3259659 D NAD-dependent formate dehydrogenase subunit gamma 3259159..3259659 Burkholderia cenocepacia J2315 6932920 YP_002232086.1 CDS fdsB NC_011000.1 3259656 3261233 D NAD-dependent formate dehydrogenase subunit beta 3259656..3261233 Burkholderia cenocepacia J2315 6933557 YP_002232087.1 CDS fdsA NC_011000.1 3261251 3264202 D NAD-dependent formate dehydrogenase subunit alpha 3261251..3264202 Burkholderia cenocepacia J2315 6933555 YP_002232088.1 CDS fdsD NC_011000.1 3264210 3264461 D NAD-dependent formate dehydrogenase subunit delat 3264210..3264461 Burkholderia cenocepacia J2315 6933554 YP_002232089.1 CDS BCAL2980 NC_011000.1 3264468 3266114 R putative oxygenase complement(3264468..3266114) Burkholderia cenocepacia J2315 6933556 YP_002232090.1 CDS BCAL2981 NC_011000.1 3266173 3268080 D hypothetical protein 3266173..3268080 Burkholderia cenocepacia J2315 6932921 YP_002232091.1 CDS citA NC_011000.1 3268162 3269457 R citrate-proton symporter complement(3268162..3269457) Burkholderia cenocepacia J2315 6932922 YP_002232092.1 CDS BCAL2982A NC_011000.1 3269812 3270780 D hypothetical protein 3269812..3270780 Burkholderia cenocepacia J2315 6933435 YP_002232093.1 CDS BCAL2983A NC_011000.1 3270859 3271557 R putative lipoprotein complement(3270859..3271557) Burkholderia cenocepacia J2315 6932923 YP_002232094.1 CDS BCAL2984 NC_011000.1 3271673 3272863 R family C26 cysteine peptidase complement(3271673..3272863) Burkholderia cenocepacia J2315 6932924 YP_002232095.1 CDS BCAL2985 NC_011000.1 3273145 3273825 D GntR family regulatory protein 3273145..3273825 Burkholderia cenocepacia J2315 6932925 YP_002232096.1 CDS BCAL2986 NC_011000.1 3273832 3275208 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3273832..3275208 Burkholderia cenocepacia J2315 6932926 YP_002232097.1 CDS dsbB NC_011000.1 3275345 3275857 D disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 3275345..3275857 Burkholderia cenocepacia J2315 6932927 YP_002232098.1 CDS BCAL2988 NC_011000.1 3276483 3277487 D hypothetical protein 3276483..3277487 Burkholderia cenocepacia J2315 6933519 YP_002232099.1 CDS add NC_011000.1 3277506 3278531 D catalyzes the formation of inosine from adenosine; adenosine deaminase 3277506..3278531 Burkholderia cenocepacia J2315 6932928 YP_002232100.1 CDS guaD NC_011000.1 3278903 3280222 D Catalyzes the deamination of guanine; guanine deaminase 3278903..3280222 Burkholderia cenocepacia J2315 6933289 YP_002232101.1 CDS BCAL2991 NC_011000.1 3280568 3281140 D hypothetical protein 3280568..3281140 Burkholderia cenocepacia J2315 6933269 YP_002232102.1 CDS BCAL2992 NC_011000.1 3281195 3281902 R putative lipoprotein complement(3281195..3281902) Burkholderia cenocepacia J2315 6932929 YP_002232103.1 CDS pepN NC_011000.1 3282090 3284783 D family M1 metallo peptidase; aminopeptidase N 3282090..3284783 Burkholderia cenocepacia J2315 6932930 YP_002232104.1 CDS fbp NC_011000.1 3285066 3286079 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 3285066..3286079 Burkholderia cenocepacia J2315 6932931 YP_002232105.1 CDS BCAL2995 NC_011000.1 3286531 3287340 D LuxR superfamily regulatory protein 3286531..3287340 Burkholderia cenocepacia J2315 6933395 YP_002232106.1 CDS BCAL2996 NC_011000.1 3287494 3289236 D FAD-dependent oxidoreductase 3287494..3289236 Burkholderia cenocepacia J2315 6932932 YP_002232107.1 CDS BCAL2997 NC_011000.1 3289236 3289445 D hypothetical protein 3289236..3289445 Burkholderia cenocepacia J2315 6932933 YP_002232108.1 CDS BCAL2998 NC_011000.1 3289709 3289963 D transglycosylase associated protein 3289709..3289963 Burkholderia cenocepacia J2315 6932934 YP_002232109.1 CDS BCAL2999 NC_011000.1 3290044 3290529 R hypothetical protein complement(3290044..3290529) Burkholderia cenocepacia J2315 6932935 YP_002232110.1 CDS BCAL3000 NC_011000.1 3290526 3291794 R putative lipoprotein complement(3290526..3291794) Burkholderia cenocepacia J2315 6932936 YP_002232111.1 CDS BCAL3001 NC_011000.1 3291782 3294145 R TonB-dependent siderophore receptor complement(3291782..3294145) Burkholderia cenocepacia J2315 6932937 YP_002232112.1 CDS BCAL3002 NC_011000.1 3294274 3294663 R hypothetical protein complement(3294274..3294663) Burkholderia cenocepacia J2315 6932938 YP_002232113.1 CDS BCAL3003 NC_011000.1 3294862 3295008 D hypothetical protein 3294862..3295008 Burkholderia cenocepacia J2315 6932939 YP_002232114.1 CDS BCAL3004 NC_011000.1 3295232 3295825 D catalyzes the interconversion of chorismate to prephenate; chorismate mutase 3295232..3295825 Burkholderia cenocepacia J2315 6932940 YP_002232115.1 CDS BCAL3005 NC_011000.1 3295839 3296966 R possible DNA polymerase/helicase complement(3295839..3296966) Burkholderia cenocepacia J2315 6932941 YP_002232116.1 CDS cspA NC_011000.1 3297108 3297311 R cold shock-like protein complement(3297108..3297311) Burkholderia cenocepacia J2315 6932942 YP_002232117.1 CDS BCAL3007 NC_011000.1 3297705 3297971 D hypothetical protein 3297705..3297971 Burkholderia cenocepacia J2315 6933459 YP_002232118.1 CDS BCAL3008 NC_011000.1 3298474 3299625 D putative outer membrane porin protein 3298474..3299625 Burkholderia cenocepacia J2315 6932943 YP_002232119.1 CDS greB NC_011000.1 3299708 3300271 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(3299708..3300271) Burkholderia cenocepacia J2315 6932944 YP_002232120.1 CDS spoT NC_011000.1 3300949 3303315 R guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase complement(3300949..3303315) Burkholderia cenocepacia J2315 6933398 YP_002232121.1 CDS rpoZ NC_011000.1 3303379 3303582 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(3303379..3303582) Burkholderia cenocepacia J2315 6934151 YP_002232122.1 CDS gmk NC_011000.1 3303641 3304324 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(3303641..3304324) Burkholderia cenocepacia J2315 6934099 YP_002232123.1 CDS BCAL3013 NC_011000.1 3304332 3305255 R hypothetical protein complement(3304332..3305255) Burkholderia cenocepacia J2315 6933663 YP_002232124.1 CDS rph NC_011000.1 3305431 3306171 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3305431..3306171 Burkholderia cenocepacia J2315 6932945 YP_002232125.1 CDS BCAL3015 NC_011000.1 3306164 3306790 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 3306164..3306790 Burkholderia cenocepacia J2315 6934057 YP_002232126.1 CDS BCAL3016 NC_011000.1 3306825 3308039 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3306825..3308039 Burkholderia cenocepacia J2315 6932946 YP_002232127.1 CDS BCAL3017 NC_011000.1 3308313 3308708 D hypothetical protein 3308313..3308708 Burkholderia cenocepacia J2315 6933399 YP_002232128.1 CDS BCAL3018 NC_011000.1 3308939 3309232 D hypothetical protein 3308939..3309232 Burkholderia cenocepacia J2315 6932948 YP_002232129.1 CDS BCAL3019 NC_011000.1 3309530 3310021 D putative lipoprotein 3309530..3310021 Burkholderia cenocepacia J2315 6932949 YP_002232130.1 CDS BCAL3020 NC_011000.1 3310327 3311637 D major facilitator superfamily protein 3310327..3311637 Burkholderia cenocepacia J2315 6932950 YP_002232131.1 CDS BCAL3021 NC_011000.1 3311674 3311919 D hypothetical protein 3311674..3311919 Burkholderia cenocepacia J2315 6932951 YP_002232132.1 CDS BCAL3022 NC_011000.1 3311936 3312931 R putative lipopolysaccharide heptosyltransferase complement(3311936..3312931) Burkholderia cenocepacia J2315 6932952 YP_002232133.1 CDS BCAL3023 NC_011000.1 3313122 3314684 D putative chloride-channel protein 3313122..3314684 Burkholderia cenocepacia J2315 6932953 YP_002232134.1 CDS BCAL3024 NC_011000.1 3314801 3315202 R hypothetical protein complement(3314801..3315202) Burkholderia cenocepacia J2315 6932954 YP_002232135.1 CDS minE NC_011000.1 3315364 3315618 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(3315364..3315618) Burkholderia cenocepacia J2315 6932955 YP_002232136.1 CDS minD NC_011000.1 3315631 3316431 R septum site-determining protein complement(3315631..3316431) Burkholderia cenocepacia J2315 6933825 YP_002232137.1 CDS minC NC_011000.1 3316506 3317291 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(3316506..3317291) Burkholderia cenocepacia J2315 6933824 YP_002232138.1 CDS BCAL3028 NC_011000.1 3317460 3317960 R acetyltransferase (GNAT) family protein complement(3317460..3317960) Burkholderia cenocepacia J2315 6933823 YP_002232139.1 CDS BCAL3029 NC_011000.1 3318640 3319800 D putative alkane monooxygenase 3318640..3319800 Burkholderia cenocepacia J2315 6932956 YP_002232140.1 CDS serS NC_011000.1 3320243 3321544 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(3320243..3321544) Burkholderia cenocepacia J2315 6933400 YP_002232141.1 CDS BCAL3031 NC_011000.1 3321793 3322059 D hypothetical protein 3321793..3322059 Burkholderia cenocepacia J2315 6934145 YP_002232142.1 CDS BCAL3032 NC_011000.1 3322102 3323427 R recombination factor protein RarA complement(3322102..3323427) Burkholderia cenocepacia J2315 6932958 YP_002232143.1 CDS lolA NC_011000.1 3323592 3324281 R participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein complement(3323592..3324281) Burkholderia cenocepacia J2315 6932959 YP_002232144.1 CDS BCAL3034 NC_011000.1 3324328 3326637 R DNA translocase FtsK complement(3324328..3326637) Burkholderia cenocepacia J2315 6932960 YP_002232145.1 CDS trxB NC_011000.1 3327026 3327988 D thioredoxin reductase 3327026..3327988 Burkholderia cenocepacia J2315 6932961 YP_002232146.1 CDS BCAL3036 NC_011000.1 3328124 3328903 D hypothetical protein 3328124..3328903 Burkholderia cenocepacia J2315 6934206 YP_002232147.1 CDS BCAL3037 NC_011000.1 3328890 3329513 D hypothetical protein 3328890..3329513 Burkholderia cenocepacia J2315 6932962 YP_002232148.1 CDS BCAL3038 NC_011000.1 3329609 3330727 R ABC transporter ATP-binding protein complement(3329609..3330727) Burkholderia cenocepacia J2315 6932963 YP_002232149.1 CDS BCAL3039 NC_011000.1 3330840 3331697 R ABC transporter permease complement(3330840..3331697) Burkholderia cenocepacia J2315 6932964 YP_002232150.1 CDS BCAL3040 NC_011000.1 3331687 3332565 R ABC transporter permease complement(3331687..3332565) Burkholderia cenocepacia J2315 6932965 YP_002232151.1 CDS malE NC_011000.1 3332764 3334011 R maltose-binding protein complement(3332764..3334011) Burkholderia cenocepacia J2315 6932966 YP_002232152.1 CDS zwf NC_011000.1 3334443 3335912 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3334443..3335912 Burkholderia cenocepacia J2315 6933803 YP_002232153.1 CDS pgl NC_011000.1 3335972 3336652 D 6-phosphogluconolactonase 3335972..3336652 Burkholderia cenocepacia J2315 6934272 YP_002232154.1 CDS glk NC_011000.1 3336630 3338558 D glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; bifunctional glucokinase/RpiR family transcriptional regulator 3336630..3338558 Burkholderia cenocepacia J2315 6933947 YP_002232155.1 CDS BCAL3045 NC_011000.1 3338651 3339487 R putative transposase complement(3338651..3339487) Burkholderia cenocepacia J2315 6933633 YP_002232156.1 CDS BCAL3046 NC_011000.1 3339487 3340011 R putative transposase complement(3339487..3340011) Burkholderia cenocepacia J2315 6932967 YP_002232157.1 CDS BCAL3047 NC_011000.1 3340107 3341324 R major facilitator superfamily protein complement(3340107..3341324) Burkholderia cenocepacia J2315 6932968 YP_002232158.1 CDS BCAL3048 NC_011000.1 3341574 3342026 D hypothetical protein 3341574..3342026 Burkholderia cenocepacia J2315 6932969 YP_002232159.1 CDS hemL NC_011000.1 3342210 3343493 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 3342210..3343493 Burkholderia cenocepacia J2315 6932970 YP_002232160.1 CDS ribD NC_011000.1 3343509 3344630 D multifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 3343509..3344630 Burkholderia cenocepacia J2315 6933702 YP_002232161.1 CDS ribE NC_011000.1 3344645 3345274 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3344645..3345274 Burkholderia cenocepacia J2315 6934039 YP_002232162.1 CDS BCAL3052 NC_011000.1 3345604 3346122 D hypothetical protein 3345604..3346122 Burkholderia cenocepacia J2315 6934040 YP_002232163.1 CDS ribB NC_011000.1 3346265 3347407 D bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 3346265..3347407 Burkholderia cenocepacia J2315 6932971 YP_002232164.1 CDS ribH NC_011000.1 3347461 3347976 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3347461..3347976 Burkholderia cenocepacia J2315 6934038 YP_002232165.1 CDS nusB NC_011000.1 3347973 3348410 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3347973..3348410 Burkholderia cenocepacia J2315 6934041 YP_002232166.1 CDS BCAL3056 NC_011000.1 3348481 3349677 D aminotransferase 3348481..3349677 Burkholderia cenocepacia J2315 6933889 YP_002232167.1 CDS BCAL3057 NC_011000.1 3349796 3350923 R putative lipoprotein complement(3349796..3350923) Burkholderia cenocepacia J2315 6932972 YP_002232168.1 CDS ubiD NC_011000.1 3351521 3353077 D 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3351521..3353077 Burkholderia cenocepacia J2315 6932973 YP_002232169.1 CDS BCAL3059 NC_011000.1 3353136 3353804 D LysE type translocator protein 3353136..3353804 Burkholderia cenocepacia J2315 6934214 YP_002232170.1 CDS RS03543 NC_011000.1 3353923 3354219 R hypothetical protein complement(3353923..3354219) Burkholderia cenocepacia J2315 6932974 YP_002232171.1 CDS BCAL3060 NC_011000.1 3354734 3355663 D hypothetical protein 3354734..3355663 Burkholderia cenocepacia J2315 6934122 YP_002232172.1 CDS BCAL3061 NC_011000.1 3355739 3356302 D hypothetical protein 3355739..3356302 Burkholderia cenocepacia J2315 6932975 YP_002232173.1 CDS BCAL3062 NC_011000.1 3356316 3356666 R hypothetical protein complement(3356316..3356666) Burkholderia cenocepacia J2315 6932976 YP_002232174.1 CDS BCAL3063 NC_011000.1 3356691 3357077 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(3356691..3357077) Burkholderia cenocepacia J2315 6932977 YP_002232175.1 CDS BCAL3064 NC_011000.1 3357259 3358125 R putative NAD-dependent deacetylase complement(3357259..3358125) Burkholderia cenocepacia J2315 6932978 YP_002232176.1 CDS BCAL3065 NC_011000.1 3358309 3358689 R hypothetical protein complement(3358309..3358689) Burkholderia cenocepacia J2315 6932979 YP_002232177.1 CDS BCAL3066 NC_011000.1 3358686 3359285 R NUDIX hydrolase complement(3358686..3359285) Burkholderia cenocepacia J2315 6932980 YP_002232178.1 CDS BCAL3067 NC_011000.1 3359367 3360122 D DeoR family regulatory protein 3359367..3360122 Burkholderia cenocepacia J2315 6932981 YP_002232179.1 CDS mmcD NC_011000.1 3360291 3361100 R catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA; methylmalonyl-CoA decarboxylase complement(3360291..3361100) Burkholderia cenocepacia J2315 6932982 YP_002232180.1 CDS BCAL3069 NC_011000.1 3361097 3362320 R putative CoA-transferase complement(3361097..3362320) Burkholderia cenocepacia J2315 6933826 YP_002232181.1 CDS BCAL3070 NC_011000.1 3362382 3363704 R major facilitator superfamily protein complement(3362382..3363704) Burkholderia cenocepacia J2315 6932983 YP_002232182.1 CDS BCAL3071 NC_011000.1 3363887 3364831 D putative nitrogen assimilation regulatory protein Nac 3363887..3364831 Burkholderia cenocepacia J2315 6932984 YP_002232183.1 CDS BCAL3072 NC_011000.1 3364886 3365512 D LysE type translocator 3364886..3365512 Burkholderia cenocepacia J2315 6932985 YP_002232184.1 CDS BCAL3073 NC_011000.1 3365509 3366690 R hypothetical protein complement(3365509..3366690) Burkholderia cenocepacia J2315 6932986 YP_002232185.1 CDS BCAL3074 NC_011000.1 3367018 3367362 R hypothetical protein complement(3367018..3367362) Burkholderia cenocepacia J2315 6932987 YP_002232186.1 CDS BCAL3076 NC_011000.1 3368967 3370727 D putative integrase 3368967..3370727 Burkholderia cenocepacia J2315 6933401 YP_002232187.1 CDS BCAL3076A NC_011000.1 3370758 3370985 R putative DNA-binding protein complement(3370758..3370985) Burkholderia cenocepacia J2315 6932990 YP_002232188.1 CDS BCAL3077 NC_011000.1 3371103 3371567 D hypothetical protein 3371103..3371567 Burkholderia cenocepacia J2315 6932991 YP_002232189.1 CDS BCAL3078 NC_011000.1 3371613 3371915 D putative lipoprotein 3371613..3371915 Burkholderia cenocepacia J2315 6932992 YP_002232190.1 CDS BCAL3079 NC_011000.1 3372313 3373218 R hypothetical protein complement(3372313..3373218) Burkholderia cenocepacia J2315 6932993 YP_002232191.1 CDS BCAL3080 NC_011000.1 3373223 3373609 R hypothetical protein complement(3373223..3373609) Burkholderia cenocepacia J2315 6932994 YP_002232192.1 CDS BCAL3081 NC_011000.1 3373581 3374069 R hypothetical protein complement(3373581..3374069) Burkholderia cenocepacia J2315 6932995 YP_002232193.1 CDS BCAL3082 NC_011000.1 3374201 3374914 D putative phage resolvase/recombinase for integration and excision 3374201..3374914 Burkholderia cenocepacia J2315 6932996 YP_002232194.1 CDS BCAL3083 NC_011000.1 3375227 3375595 R hypothetical protein complement(3375227..3375595) Burkholderia cenocepacia J2315 6932997 YP_002232195.1 CDS BCAL3084 NC_011000.1 3375935 3376414 R putative guanine/cytidine deaminase complement(3375935..3376414) Burkholderia cenocepacia J2315 6932998 YP_002232196.1 CDS BCAL3085 NC_011000.1 3376425 3376760 R putative transthyretin-like protein complement(3376425..3376760) Burkholderia cenocepacia J2315 6932999 YP_002232197.1 CDS BCAL3086 NC_011000.1 3376808 3377329 R transthyretin-like protein complement(3376808..3377329) Burkholderia cenocepacia J2315 6933000 YP_002232198.1 CDS BCAL3087 NC_011000.1 3377332 3378672 R major facilitator superfamily protein complement(3377332..3378672) Burkholderia cenocepacia J2315 6933001 YP_002232199.1 CDS BCAL3088 NC_011000.1 3379031 3379969 D LysR family regulatory protein 3379031..3379969 Burkholderia cenocepacia J2315 6933002 YP_002232200.1 CDS BCAL3089 NC_011000.1 3380119 3380646 D hypothetical protein 3380119..3380646 Burkholderia cenocepacia J2315 6933003 YP_002232201.1 CDS trmB NC_011000.1 3380990 3381766 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3380990..3381766 Burkholderia cenocepacia J2315 6933004 YP_002232202.1 CDS BCAL3091 NC_011000.1 3381860 3382690 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(3381860..3382690) Burkholderia cenocepacia J2315 6933005 YP_002232203.1 CDS BCAL3092 NC_011000.1 3382770 3383351 R hypothetical protein complement(3382770..3383351) Burkholderia cenocepacia J2315 6933006 YP_002232204.1 CDS BCAL3093 NC_011000.1 3383348 3383665 R hypothetical protein complement(3383348..3383665) Burkholderia cenocepacia J2315 6933007 YP_002232205.1 CDS hemN NC_011000.1 3383839 3385230 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3383839..3385230 Burkholderia cenocepacia J2315 6933008 YP_002232206.1 CDS BCAL3095 NC_011000.1 3385327 3385584 D hypothetical protein 3385327..3385584 Burkholderia cenocepacia J2315 6933703 YP_002232207.1 CDS pcm NC_011000.1 3385689 3386345 D putative protein-L-isoaspartate O-methyltransferase 3385689..3386345 Burkholderia cenocepacia J2315 6933009 YP_002232208.1 CDS BCAL3097 NC_011000.1 3386360 3386683 D hypothetical protein 3386360..3386683 Burkholderia cenocepacia J2315 6933934 YP_002232209.1 CDS BCAL3098 NC_011000.1 3387037 3388344 D hypothetical protein 3387037..3388344 Burkholderia cenocepacia J2315 6933010 YP_002232210.1 CDS BCAL3099 NC_011000.1 3388484 3390103 D putative branched-chain amino acid transporter permease 3388484..3390103 Burkholderia cenocepacia J2315 6933011 YP_002232211.1 CDS BCAL3100 NC_011000.1 3390177 3391292 D putative branched-chain amino acid transporter permease 3390177..3391292 Burkholderia cenocepacia J2315 6933012 YP_002232212.1 CDS BCAL3101 NC_011000.1 3391289 3392143 D ABC transporter ATP-binding protein 3391289..3392143 Burkholderia cenocepacia J2315 6933013 YP_002232213.1 CDS BCAL3102 NC_011000.1 3392148 3392840 D ABC transporter ATP-binding protein 3392148..3392840 Burkholderia cenocepacia J2315 6933014 YP_002232214.1 CDS UreD NC_011000.1 3393006 3393881 D UreD-family accessory protein 3393006..3393881 Burkholderia cenocepacia J2315 6933015 YP_002232215.1 CDS ureA NC_011000.1 3394114 3394416 D UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 3394114..3394416 Burkholderia cenocepacia J2315 6934225 YP_002232216.1 CDS ureB NC_011000.1 3394425 3394730 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 3394425..3394730 Burkholderia cenocepacia J2315 6934222 YP_002232217.1 CDS ureC NC_011000.1 3394760 3396466 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 3394760..3396466 Burkholderia cenocepacia J2315 6934223 YP_002232218.1 CDS ureE NC_011000.1 3396485 3397099 D urease accessory protein 3396485..3397099 Burkholderia cenocepacia J2315 6934224 YP_002232219.1 CDS ureF NC_011000.1 3397086 3397766 D urease accessory protein 3397086..3397766 Burkholderia cenocepacia J2315 6934226 YP_002232220.1 CDS ureG NC_011000.1 3397783 3398430 D urease accessory protein 3397783..3398430 Burkholderia cenocepacia J2315 6934227 YP_002232221.1 CDS waaA NC_011000.1 3398496 3399857 R catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase complement(3398496..3399857) Burkholderia cenocepacia J2315 6934228 YP_002232222.1 CDS wbxY NC_011000.1 3399895 3400779 R hypothetical protein complement(3399895..3400779) Burkholderia cenocepacia J2315 6934235 YP_002232223.1 CDS waaC NC_011000.1 3400803 3401798 R heptosyltransferase I complement(3400803..3401798) Burkholderia cenocepacia J2315 6934248 YP_002232224.1 CDS manB NC_011000.1 3401971 3403365 R phosphomannomutase complement(3401971..3403365) Burkholderia cenocepacia J2315 6934236 YP_002232225.1 CDS wzx NC_011000.1 3403610 3404866 D putative O-antigen exporter 3403610..3404866 Burkholderia cenocepacia J2315 6933804 YP_002232226.1 CDS wbxA NC_011000.1 3404899 3405687 D glycosyltransferase 3404899..3405687 Burkholderia cenocepacia J2315 6934263 YP_002232227.1 CDS wbxB NC_011000.1 3405739 3406875 D glycosyltransferase 3405739..3406875 Burkholderia cenocepacia J2315 6934243 YP_002232228.1 CDS galE NC_011000.1 3406891 3407913 D UDP-glucose epimerase 3406891..3407913 Burkholderia cenocepacia J2315 6934244 YP_002232229.1 CDS wecA NC_011000.1 3407941 3409047 D UDP-N-acetylglucosamine-1-P transferase 3407941..3409047 Burkholderia cenocepacia J2315 6933617 YP_002232230.1 CDS wbiI NC_011000.1 3409126 3411009 R nucleotide sugar epimerase/dehydratase complement(3409126..3411009) Burkholderia cenocepacia J2315 6934257 YP_002232231.1 CDS wbiH NC_011000.1 3411022 3412038 R UDP-N-acetylglucosamine-1-P transferase complement(3411022..3412038) Burkholderia cenocepacia J2315 6934242 YP_002232232.1 CDS wbiG NC_011000.1 3412044 3413021 R putative nucleotide sugar epimerase/dehydratase complement(3412044..3413021) Burkholderia cenocepacia J2315 6934241 YP_002232233.1 CDS wbiF NC_011000.1 3413006 3413887 R glycosyltransferase complement(3413006..3413887) Burkholderia cenocepacia J2315 6934240 YP_002232234.1 CDS wbxC NC_011000.1 3414162 3414830 D acetyltransferase 3414162..3414830 Burkholderia cenocepacia J2315 6934239 YP_002232235.1 CDS wbxD NC_011000.1 3414875 3416842 R glycosyltransferase complement(3414875..3416842) Burkholderia cenocepacia J2315 6934245 YP_002232236.1 CDS BCAL3126b NC_011000.1 3418040 3418857 D transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3'; putative transposase join(3418040..3418393,3418390..3418857) Burkholderia cenocepacia J2315 6934238 YP_002232237.1 CDS wbxF NC_011000.1 3419149 3420453 R glycosyltransferase complement(3419149..3420453) Burkholderia cenocepacia J2315 6933016 YP_002232238.1 CDS vioA NC_011000.1 3420443 3421585 R nucleotide sugar aminotransferase complement(3420443..3421585) Burkholderia cenocepacia J2315 6934247 YP_002232239.1 CDS wzt NC_011000.1 3421647 3422960 R ABC transporter ATP-binding protein complement(3421647..3422960) Burkholderia cenocepacia J2315 6934234 YP_002232240.1 CDS wzm NC_011000.1 3422950 3423756 R putative ABC transporter, membrane permease complement(3422950..3423756) Burkholderia cenocepacia J2315 6934261 YP_002232241.1 CDS rmlD NC_011000.1 3423824 3424747 R dTDP-4-keto-L-rhamnose reductase complement(3423824..3424747) Burkholderia cenocepacia J2315 6934259 YP_002232242.1 CDS rmlC NC_011000.1 3424740 3425291 R dTDP-4-keto-6-deoxy-D-glucose 3,5-epimerase complement(3424740..3425291) Burkholderia cenocepacia J2315 6934048 YP_002232243.1 CDS rmlA NC_011000.1 3425276 3426169 R glucose-1-phosphate thymidylyltransferase complement(3425276..3426169) Burkholderia cenocepacia J2315 6934047 YP_002232244.1 CDS rmlB NC_011000.1 3426181 3427242 R dTDP-D-glucose 4,6-dehydratase complement(3426181..3427242) Burkholderia cenocepacia J2315 6934045 YP_002232245.1 CDS apaH NC_011000.1 3427593 3428432 D hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 3427593..3428432 Burkholderia cenocepacia J2315 6934046 YP_002232246.1 CDS plsC NC_011000.1 3428470 3429327 R putative 1-acyl-SN-glycerol-3-phosphate acyltransferase complement(3428470..3429327) Burkholderia cenocepacia J2315 6933299 YP_002232247.1 CDS pyrX NC_011000.1 3429347 3430624 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(3429347..3430624) Burkholderia cenocepacia J2315 6933965 YP_002232248.1 CDS pyrB NC_011000.1 3430686 3431717 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(3430686..3431717) Burkholderia cenocepacia J2315 6934020 YP_002232249.1 CDS pyrR NC_011000.1 3431791 3432315 R regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase complement(3431791..3432315) Burkholderia cenocepacia J2315 6934013 YP_002232250.1 CDS BCAL3141 NC_011000.1 3432302 3432751 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(3432302..3432751) Burkholderia cenocepacia J2315 6934019 YP_002232251.1 CDS BCAL3142 NC_011000.1 3432748 3433326 R hypothetical protein complement(3432748..3433326) Burkholderia cenocepacia J2315 6933017 YP_002232252.1 CDS BCAL3143 NC_011000.1 3433509 3434816 R hypothetical protein complement(3433509..3434816) Burkholderia cenocepacia J2315 6933018 YP_002232253.1 CDS rubA NC_011000.1 3434915 3435085 R rubredoxin complement(3434915..3435085) Burkholderia cenocepacia J2315 6933019 YP_002232254.1 CDS BCAL3145 NC_011000.1 3435341 3436207 D putative kinase 3435341..3436207 Burkholderia cenocepacia J2315 6934127 YP_002232255.1 CDS groEL NC_011000.1 3436397 3438037 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(3436397..3438037) Burkholderia cenocepacia J2315 6933020 YP_002232256.1 CDS groES NC_011000.1 3438084 3438377 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(3438084..3438377) Burkholderia cenocepacia J2315 6933670 YP_002232257.1 CDS BCAL3148 NC_011000.1 3438772 3439287 R hypothetical protein complement(3438772..3439287) Burkholderia cenocepacia J2315 6933671 YP_002232258.1 CDS BCAL3149 NC_011000.1 3439330 3439962 R hypothetical protein complement(3439330..3439962) Burkholderia cenocepacia J2315 6933021 YP_002232259.1 CDS BCAL3150 NC_011000.1 3439959 3440411 R hypothetical protein complement(3439959..3440411) Burkholderia cenocepacia J2315 6933022 YP_002232260.1 CDS BCAL3151 NC_011000.1 3440408 3441190 R hypothetical protein complement(3440408..3441190) Burkholderia cenocepacia J2315 6933023 YP_002232261.1 CDS BCAL3152 NC_011000.1 3441187 3441702 R putative RNA polymerase sigma factor complement(3441187..3441702) Burkholderia cenocepacia J2315 6933024 YP_002232262.1 CDS BCAL3153 NC_011000.1 3441730 3442080 R putative lipoprotein complement(3441730..3442080) Burkholderia cenocepacia J2315 6933025 YP_002232263.1 CDS BCAL3154 NC_011000.1 3442386 3445307 R Similar to codons 738 to 1690 of Rhizobium loti hypothetical glycine-rich protein Mlr0585 mlr0585 SWALL:Q98MG8 (EMBL:AP002995) (2147 aa) fasta scores: E(): 1e-32, 33.91% id in 979 aa; putative glycine-rich surface protein complement(3442386..3445307) Burkholderia cenocepacia J2315 6933026 YP_002232264.1 CDS BCAL3155 NC_011000.1 3445759 3447015 R putative amino acid dehydrogenase complement(3445759..3447015) Burkholderia cenocepacia J2315 6933027 YP_002232265.1 CDS BCAL3156 NC_011000.1 3447071 3447847 R putative periplasmic lysine-arginine-ornithine-binding protein complement(3447071..3447847) Burkholderia cenocepacia J2315 6933028 YP_002232266.1 CDS BCAL3157 NC_011000.1 3448229 3449203 D putative ornithine cyclodeaminase 3448229..3449203 Burkholderia cenocepacia J2315 6933029 YP_002232267.1 CDS BCAL3158 NC_011000.1 3449345 3449992 D hypothetical protein 3449345..3449992 Burkholderia cenocepacia J2315 6933030 YP_002232268.1 CDS BCAL3159 NC_011000.1 3450176 3450904 D hypothetical protein 3450176..3450904 Burkholderia cenocepacia J2315 6933031 YP_002232269.1 CDS BCAL3160 NC_011000.1 3451036 3452475 D major facilitator superfamily protein 3451036..3452475 Burkholderia cenocepacia J2315 6933032 YP_002232270.1 CDS BCAL3161 NC_011000.1 3452711 3453556 D hypothetical protein 3452711..3453556 Burkholderia cenocepacia J2315 6933033 YP_002232271.1 CDS BCAL3162 NC_011000.1 3453645 3454082 R hypothetical protein complement(3453645..3454082) Burkholderia cenocepacia J2315 6933034 YP_002232272.1 CDS BCAL3163 NC_011000.1 3454082 3454672 R putative nucleotidyltransferase complement(3454082..3454672) Burkholderia cenocepacia J2315 6933035 YP_002232273.1 CDS BCAL3164 NC_011000.1 3454926 3456761 R family S10 serine peptidase complement(3454926..3456761) Burkholderia cenocepacia J2315 6933036 YP_002232274.1 CDS BCAL3165 NC_011000.1 3457377 3459548 R putative exported hydrolase complement(3457377..3459548) Burkholderia cenocepacia J2315 6933037 YP_002232275.1 CDS BCAL3166 NC_011000.1 3459603 3459968 R putative lipoprotein complement(3459603..3459968) Burkholderia cenocepacia J2315 6933038 YP_002232276.1 CDS BCAL3167 NC_011000.1 3460400 3461842 D hypothetical protein 3460400..3461842 Burkholderia cenocepacia J2315 6933039 YP_002232277.1 CDS BCAL3168 NC_011000.1 3461889 3462575 D putative isomerase 3461889..3462575 Burkholderia cenocepacia J2315 6933040 YP_002232278.1 CDS BCAL3169 NC_011000.1 3462645 3463589 D LysR family regulatory protein 3462645..3463589 Burkholderia cenocepacia J2315 6933041 YP_002232279.1 CDS BCAL3170 NC_011000.1 3463635 3464036 R hypothetical protein complement(3463635..3464036) Burkholderia cenocepacia J2315 6933042 YP_002232280.1 CDS BCAL3171 NC_011000.1 3464139 3464807 R hypothetical protein complement(3464139..3464807) Burkholderia cenocepacia J2315 6933043 YP_002232281.1 CDS xdhB NC_011000.1 3464809 3467172 R putative xanthine dehydrogenase large subunit complement(3464809..3467172) Burkholderia cenocepacia J2315 6933044 YP_002232282.1 CDS xdhA NC_011000.1 3467191 3468792 R xanthine dehydrogenase complement(3467191..3468792) Burkholderia cenocepacia J2315 6934266 YP_002232283.1 CDS BCAL3174 NC_011000.1 3469185 3470342 D major facilitator superfamily transporter 3469185..3470342 Burkholderia cenocepacia J2315 6934265 YP_002232284.1 CDS BCAL3175 NC_011000.1 3470472 3471362 R hypothetical protein complement(3470472..3471362) Burkholderia cenocepacia J2315 6933045 YP_002232285.1 CDS BCAL3176 NC_011000.1 3471497 3472432 D AraC family regulatory protein 3471497..3472432 Burkholderia cenocepacia J2315 6933046 YP_002232286.1 CDS BCAL3177 NC_011000.1 3472470 3473642 R putative aminotransferase complement(3472470..3473642) Burkholderia cenocepacia J2315 6933047 YP_002232287.1 CDS BCAL3178 NC_011000.1 3474480 3475445 D LysR family regulatory protein 3474480..3475445 Burkholderia cenocepacia J2315 6933048 YP_002232288.1 CDS ldhA NC_011000.1 3475476 3476474 D putative D-lactate dehydrogenase 3475476..3476474 Burkholderia cenocepacia J2315 6933049 YP_002232289.1 CDS BCAL3180 NC_011000.1 3476646 3477389 D putative oxidoreductase 3476646..3477389 Burkholderia cenocepacia J2315 6933779 YP_002232290.1 CDS BCAL3181 NC_011000.1 3477610 3478779 D major facilitator superfamily protein 3477610..3478779 Burkholderia cenocepacia J2315 6933050 YP_002232291.1 CDS BCAL3182 NC_011000.1 3478873 3480033 D major facilitator superfamily protein 3478873..3480033 Burkholderia cenocepacia J2315 6933051 YP_002232292.1 CDS BCAL3183 NC_011000.1 3480260 3481561 R putative hydrolase complement(3480260..3481561) Burkholderia cenocepacia J2315 6933052 YP_002232293.1 CDS hmgA NC_011000.1 3481558 3482892 R An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase complement(3481558..3482892) Burkholderia cenocepacia J2315 6933053 YP_002232294.1 CDS pcaK NC_011000.1 3482908 3484242 R 4-hydroxybenzoate transporter complement(3482908..3484242) Burkholderia cenocepacia J2315 6933727 YP_002232295.1 CDS BCAL3186 NC_011000.1 3484266 3484496 R hypothetical protein complement(3484266..3484496) Burkholderia cenocepacia J2315 6933933 YP_002232296.1 CDS BCAL3187 NC_011000.1 3484524 3486176 R FAD-dependent oxidoreductase complement(3484524..3486176) Burkholderia cenocepacia J2315 6933054 YP_002232297.1 CDS BCAL3188 NC_011000.1 3486540 3487343 D putative diguanylate phosphodiesterase 3486540..3487343 Burkholderia cenocepacia J2315 6933055 YP_002232298.1 CDS BCAL3189 NC_011000.1 3487535 3487945 R hypothetical protein complement(3487535..3487945) Burkholderia cenocepacia J2315 6933056 YP_002232299.1 CDS BCAL3190 NC_011000.1 3488086 3488877 R IclR family regulatory protein complement(3488086..3488877) Burkholderia cenocepacia J2315 6933057 YP_002232300.1 CDS BCAL3191 NC_011000.1 3488991 3490178 D putative glutaryl-CoA dehydrogenase 3488991..3490178 Burkholderia cenocepacia J2315 6933058 YP_002232301.1 CDS BCAL3192 NC_011000.1 3490304 3490942 R putative oxidoreductase complement(3490304..3490942) Burkholderia cenocepacia J2315 6933059 YP_002232302.1 CDS BCAL3193 NC_011000.1 3491261 3491563 D hypothetical protein 3491261..3491563 Burkholderia cenocepacia J2315 6933060 YP_002232303.1 CDS BCAL3194 NC_011000.1 3491683 3492072 D hypothetical protein 3491683..3492072 Burkholderia cenocepacia J2315 6933061 YP_002232304.1 CDS BCAL3195 NC_011000.1 3492116 3492559 D hypothetical protein 3492116..3492559 Burkholderia cenocepacia J2315 6933062 YP_002232305.1 CDS nrdR NC_011000.1 3493089 3493568 R transcriptional regulator NrdR complement(3493089..3493568) Burkholderia cenocepacia J2315 6933064 YP_002232306.1 CDS glyA NC_011000.1 3493575 3494822 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(3493575..3494822) Burkholderia cenocepacia J2315 6933065 YP_002232307.1 CDS BCAL3198 NC_011000.1 3495241 3495987 D putative short-chain dehydrogenase 3495241..3495987 Burkholderia cenocepacia J2315 6933659 YP_002232308.1 CDS BCAL3199 NC_011000.1 3496089 3496574 D putative thioesterase 3496089..3496574 Burkholderia cenocepacia J2315 6933066 YP_002232309.1 CDS tolQ NC_011000.1 3496719 3497396 D putative TolQ transport transmembrane protein 3496719..3497396 Burkholderia cenocepacia J2315 6933067 YP_002232310.1 CDS tolR NC_011000.1 3497407 3497856 D putative TolR-related protein 3497407..3497856 Burkholderia cenocepacia J2315 6934193 YP_002232311.1 CDS tolA NC_011000.1 3497853 3498893 D possible TolA-related transport transmembrane protein 3497853..3498893 Burkholderia cenocepacia J2315 6934194 YP_002232312.1 CDS tolB NC_011000.1 3499003 3500298 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3499003..3500298 Burkholderia cenocepacia J2315 6934191 YP_002232313.1 CDS BCAL3204 NC_011000.1 3500316 3500828 D putative OmpA family lipoprotein 3500316..3500828 Burkholderia cenocepacia J2315 6934192 YP_002232314.1 CDS BCAL3205 NC_011000.1 3500848 3501597 D hypothetical protein 3500848..3501597 Burkholderia cenocepacia J2315 6933068 YP_002232315.1 CDS BCAL3205a NC_011000.1 3502025 3502345 R putative phage-related regulator complement(3502025..3502345) Burkholderia cenocepacia J2315 6933402 YP_002232316.1 CDS BCAL3205C NC_011000.1 3502484 3502879 D hypothetical protein 3502484..3502879 Burkholderia cenocepacia J2315 6933070 YP_002232317.1 CDS BCAL3207 NC_011000.1 3502947 3503399 D hypothetical protein 3502947..3503399 Burkholderia cenocepacia J2315 6933071 YP_002232318.1 CDS BCAL3208 NC_011000.1 3503667 3504686 D putative transposase 3503667..3504686 Burkholderia cenocepacia J2315 6933072 YP_002232319.1 CDS BCAL3208a NC_011000.1 3504973 3505185 D hypothetical protein 3504973..3505185 Burkholderia cenocepacia J2315 6933073 YP_002232320.1 CDS BCAL3209 NC_011000.1 3505182 3505505 D hypothetical protein 3505182..3505505 Burkholderia cenocepacia J2315 6933074 YP_002232321.1 CDS BCAL3210 NC_011000.1 3505825 3506349 D hypothetical protein 3505825..3506349 Burkholderia cenocepacia J2315 6933075 YP_002232322.1 CDS BCAL3211 NC_011000.1 3506351 3507376 D hypothetical protein 3506351..3507376 Burkholderia cenocepacia J2315 6933076 YP_002232323.1 CDS BCAL3212 NC_011000.1 3507499 3507942 R hypothetical protein complement(3507499..3507942) Burkholderia cenocepacia J2315 6933077 YP_002232324.1 CDS BCAL3213 NC_011000.1 3508046 3508993 R AraC family regulatory protein complement(3508046..3508993) Burkholderia cenocepacia J2315 6933078 YP_002232325.1 CDS BCAL3214 NC_011000.1 3509123 3509452 D carboxymuconolactone decarboxylase family protein 3509123..3509452 Burkholderia cenocepacia J2315 6933079 YP_002232326.1 CDS BCAL3215 NC_011000.1 3509653 3510486 D family C44 cysteine peptidase 3509653..3510486 Burkholderia cenocepacia J2315 6933080 YP_002232327.1 CDS cysC NC_011000.1 3510685 3511248 D adenylyl-sulfate kinase 3510685..3511248 Burkholderia cenocepacia J2315 6933081 YP_002232328.1 CDS BCAL3217 NC_011000.1 3511359 3512033 R putative acetyltransferase protein complement(3511359..3512033) Burkholderia cenocepacia J2315 6933472 YP_002232329.1 CDS wcbT NC_011000.1 3512030 3513358 R putative acyl-CoA transferase complement(3512030..3513358) Burkholderia cenocepacia J2315 6933082 YP_002232330.1 CDS wcbS NC_011000.1 3513424 3514341 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(3513424..3514341) Burkholderia cenocepacia J2315 6934256 YP_002232331.1 CDS wcbR NC_011000.1 3514338 3521987 R capsular polysaccharide biosynthesis fatty acid synthase complement(3514338..3521987) Burkholderia cenocepacia J2315 6934255 YP_002232332.1 CDS wcbQ NC_011000.1 3521991 3523511 R putative capsular polysaccharide biosynthesis sulfatase membrane protein complement(3521991..3523511) Burkholderia cenocepacia J2315 6934254 YP_002232333.1 CDS wcbP NC_011000.1 3523517 3524311 R putative capsular polysaccharide biosynthesis dehydrogenase/reductase protein complement(3523517..3524311) Burkholderia cenocepacia J2315 6934253 YP_002232334.1 CDS BCAL3225 NC_011000.1 3526141 3526404 R Highly similar to Burkholderia cepacia insertion element IS407 hypothetical 10.0 kDa protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 1e-31, 98.85% id in 87 aa; transposase complement(3526141..3526404) Burkholderia cenocepacia J2315 6933083 YP_002232335.1 CDS BCAL3227 NC_011000.1 3527662 3529458 R C-terminus is similar to Helicobacter pylori J99 putative jhp0052 SWALL:Q9ZN08 (EMBL:AE001444) (327 aa) fasta scores: E(): 6.6e-09, 28.71% id in 310 aa; hypothetical protein complement(3527662..3529458) Burkholderia cenocepacia J2315 6933084 YP_002232336.1 CDS BCAL3228 NC_011000.1 3530473 3531018 R hypothetical protein complement(3530473..3531018) Burkholderia cenocepacia J2315 6933085 YP_002232337.1 CDS BCAL3229 NC_011000.1 3531274 3533205 R Possible alternative translational start site. C-terminal region is similar to Burkholderia phymatum stm815 fkbH like protein UniProt:A0FXR6 (EMBL:AAUG01000008 (623 aa) fasta scores: E()=1.1e-54, 37.500% id in 592 aa; hypothetical protein complement(3531274..3533205) Burkholderia cenocepacia J2315 6933086 YP_002232338.1 CDS BCAL3229A NC_011000.1 3534011 3534439 R hypothetical protein complement(3534011..3534439) Burkholderia cenocepacia J2315 6933087 YP_002232339.1 CDS BCAL3230 NC_011000.1 3534564 3535046 D hypothetical protein 3534564..3535046 Burkholderia cenocepacia J2315 6933088 YP_002232340.1 CDS BCAL3231 NC_011000.1 3535239 3536282 D hypothetical protein 3535239..3536282 Burkholderia cenocepacia J2315 6933089 YP_002232341.1 CDS BCAL3232 NC_011000.1 3536307 3537905 D hypothetical protein 3536307..3537905 Burkholderia cenocepacia J2315 6933090 YP_002232342.1 CDS BCAL3233 NC_011000.1 3539110 3540081 D glcosyltransferase 3539110..3540081 Burkholderia cenocepacia J2315 6933091 YP_002232343.1 CDS BCAL3234 NC_011000.1 3540104 3541036 D glycosyltransferase 3540104..3541036 Burkholderia cenocepacia J2315 6933092 YP_002232344.1 CDS BCAL3235 NC_011000.1 3541085 3542236 R putative UDP-galactopyranose mutase complement(3541085..3542236) Burkholderia cenocepacia J2315 6933093 YP_002232345.1 CDS BCAL3236 NC_011000.1 3542322 3542705 D putative transposase 3542322..3542705 Burkholderia cenocepacia J2315 6933094 YP_002232346.1 CDS BCAL3237 NC_011000.1 3542702 3543040 D putative transposase 3542702..3543040 Burkholderia cenocepacia J2315 6933095 YP_002232347.1 CDS BCAL3238 NC_011000.1 3543104 3544657 D putative transposase 3543104..3544657 Burkholderia cenocepacia J2315 6933096 YP_002232348.1 CDS BCAL3239 NC_011000.1 3544778 3547483 R C-terminus is similar to Streptococcus thermophilus EpsH or Eps1I SWALL:Q93DZ7 (EMBL:AF373595) (316 aa) fasta scores: E(): 1.4e-19, 33.2% id in 250 aa, and C-terminus is similar to Campylobacter jejuni putative sugar transferase cj1434C SWALL:Q9PMM3 (EMBL:AL139078) (445 aa) fasta scores: E(): 2.8e-21, 31.54% id in 279 aa; glucosyltransferase complement(3544778..3547483) Burkholderia cenocepacia J2315 6933097 YP_002232349.1 CDS wzt2 NC_011000.1 3547504 3548157 R putative capsular polysaccharide transporter ATP-binding protein complement(3547504..3548157) Burkholderia cenocepacia J2315 6933098 YP_002232350.1 CDS wzm NC_011000.1 3548167 3548961 R putative capsular polysaccharide export protein ABC transporter membrane protein complement(3548167..3548961) Burkholderia cenocepacia J2315 6934262 YP_002232351.1 CDS wcbD NC_011000.1 3548951 3550057 R putative capsule polysaccharide export protein ABC transporter membrane protein complement(3548951..3550057) Burkholderia cenocepacia J2315 6934260 YP_002232352.1 CDS wcbC NC_011000.1 3550131 3551303 R putative capsular polysaccharide biosynthesis/export protein complement(3550131..3551303) Burkholderia cenocepacia J2315 6934251 YP_002232353.1 CDS BCAL3244 NC_011000.1 3551458 3552609 D glycosyltransferase 3551458..3552609 Burkholderia cenocepacia J2315 6934250 YP_002232354.1 CDS wcbA NC_011000.1 3552606 3554534 D capsule polysaccharide export protein 3552606..3554534 Burkholderia cenocepacia J2315 6933099 YP_002232355.1 CDS manC NC_011000.1 3554996 3556423 D putative GDP-mannose pyrophosphorylase 3554996..3556423 Burkholderia cenocepacia J2315 6934249 YP_002232356.1 CDS BCAL3247 NC_011000.1 3556622 3557434 D mechanosensitive ion channel protein 3556622..3557434 Burkholderia cenocepacia J2315 6933805 YP_002232357.1 CDS BCAL3250 NC_011000.1 3558216 3559484 R Similar to Rhizobium meliloti transposase for insertion sequence element isrm3 SWALL:TRA3_RHIME (SWALL:P80011) (400 aa) fasta scores: E(): 1.7e-91, 58.5% id in 400 aa; putative transposase complement(3558216..3559484) Burkholderia cenocepacia J2315 6933101 YP_002232358.1 CDS BCAL3252 NC_011000.1 3560234 3560527 R putative transposase complement(3560234..3560527) Burkholderia cenocepacia J2315 6933102 YP_002232359.1 CDS BCAL3254 NC_011000.1 3561454 3561978 R Similar to Ralstonia solanacearum isrso11- transposase OrfA protein SWALL:Q8XG34 (EMBL:AL646073) (177 aa) fasta scores: E(): 9.2e-31, 55.68% id in 176 aa; putative transposase complement(3561454..3561978) Burkholderia cenocepacia J2315 6933103 YP_002232360.1 CDS BCAL3255 NC_011000.1 3562071 3562754 R putative DedA family protein complement(3562071..3562754) Burkholderia cenocepacia J2315 6933104 YP_002232361.1 CDS mutL NC_011000.1 3562928 3564925 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 3562928..3564925 Burkholderia cenocepacia J2315 6933105 YP_002232362.1 CDS miaA NC_011000.1 3564922 3565902 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 3564922..3565902 Burkholderia cenocepacia J2315 6933864 YP_002232363.1 CDS tetR NC_011000.1 3565908 3566540 R tetracycline repressor protein complement(3565908..3566540) Burkholderia cenocepacia J2315 6933821 YP_002232364.1 CDS BCAL3260 NC_011000.1 3567819 3568214 R hypothetical protein complement(3567819..3568214) Burkholderia cenocepacia J2315 6934174 YP_002232365.1 CDS purM NC_011000.1 3568326 3569381 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(3568326..3569381) Burkholderia cenocepacia J2315 6933106 YP_002232366.1 CDS BCAL3262 NC_011000.1 3569632 3570366 D DnaA regulatory inactivator Hda 3569632..3570366 Burkholderia cenocepacia J2315 6934006 YP_002232367.1 CDS BCAL3263 NC_011000.1 3570378 3571055 D hypothetical protein 3570378..3571055 Burkholderia cenocepacia J2315 6933107 YP_002232368.1 CDS BCAL3264 NC_011000.1 3571061 3572611 D putative polynucleotide adenylyltransferase 3571061..3572611 Burkholderia cenocepacia J2315 6933108 YP_002232369.1 CDS BCAL3265 NC_011000.1 3572647 3573189 D putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 3572647..3573189 Burkholderia cenocepacia J2315 6933109 YP_002232370.1 CDS BCAL3266 NC_011000.1 3573186 3573872 D putative deoxyguanosine kinase/deoxyadenosine kinase 3573186..3573872 Burkholderia cenocepacia J2315 6933110 YP_002232371.1 CDS panB NC_011000.1 3573916 3574731 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3573916..3574731 Burkholderia cenocepacia J2315 6933111 YP_002232372.1 CDS BCAL3268 NC_011000.1 3574842 3576764 R chorismate binding enzyme complement(3574842..3576764) Burkholderia cenocepacia J2315 6933926 YP_002232373.1 CDS dnaJ NC_011000.1 3576768 3577904 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(3576768..3577904) Burkholderia cenocepacia J2315 6933112 YP_002232374.1 CDS dnaK NC_011000.1 3578158 3580110 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(3578158..3580110) Burkholderia cenocepacia J2315 6933508 YP_002232375.1 CDS BCAL3271 NC_011000.1 3580259 3580702 R thioredoxin complement(3580259..3580702) Burkholderia cenocepacia J2315 6933509 YP_002232376.1 CDS BCAL3272 NC_011000.1 3580713 3581258 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(3580713..3581258) Burkholderia cenocepacia J2315 6933113 YP_002232377.1 CDS BCAL3273 NC_011000.1 3581744 3582151 R putative heat shock protein complement(3581744..3582151) Burkholderia cenocepacia J2315 6933114 YP_002232378.1 CDS hemH NC_011000.1 3582154 3583224 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(3582154..3583224) Burkholderia cenocepacia J2315 6933115 YP_002232379.1 CDS hrcA NC_011000.1 3583374 3584396 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(3583374..3584396) Burkholderia cenocepacia J2315 6933116 YP_002232380.1 CDS ppnK NC_011000.1 3584528 3585430 D catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 3584528..3585430 Burkholderia cenocepacia J2315 6933117 YP_002232381.1 CDS BCAL3277 NC_011000.1 3585450 3587099 D putative RecN DNA repair protein 3585450..3587099 Burkholderia cenocepacia J2315 6933118 YP_002232382.1 CDS glnE NC_011000.1 3587194 3590070 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(3587194..3590070) Burkholderia cenocepacia J2315 6933119 YP_002232383.1 CDS BCAL3279 NC_011000.1 3590228 3594427 D hypothetical protein 3590228..3594427 Burkholderia cenocepacia J2315 6933640 YP_002232384.1 CDS BCAL3280 NC_011000.1 3594490 3595317 D putative carbon-nitrogen hydrolase protein 3594490..3595317 Burkholderia cenocepacia J2315 6933120 YP_002232385.1 CDS tldD NC_011000.1 3595403 3596869 D putative DNA gyrase control protein 3595403..3596869 Burkholderia cenocepacia J2315 6933121 YP_002232386.1 CDS aroG NC_011000.1 3597267 3598340 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3597267..3598340 Burkholderia cenocepacia J2315 6934190 YP_002232387.1 CDS BCAL3283 NC_011000.1 3598450 3598719 D hypothetical protein 3598450..3598719 Burkholderia cenocepacia J2315 6933315 YP_002232388.1 CDS BCAL3284 NC_011000.1 3598716 3599105 D hypothetical protein 3598716..3599105 Burkholderia cenocepacia J2315 6933122 YP_002232389.1 CDS hmpA NC_011000.1 3599178 3600386 R flavohemoprotein complement(3599178..3600386) Burkholderia cenocepacia J2315 6933123 YP_002232390.1 CDS BCAL3286 NC_011000.1 3600481 3601032 R cobalamin adenosyltransferase protein complement(3600481..3601032) Burkholderia cenocepacia J2315 6933728 YP_002232391.1 CDS BCAL3287 NC_011000.1 3601169 3602578 D putative FAD-binding oxidase 3601169..3602578 Burkholderia cenocepacia J2315 6933124 YP_002232392.1 CDS glcD NC_011000.1 3602616 3604109 D putative glycolate oxidase subunit GlcD 3602616..3604109 Burkholderia cenocepacia J2315 6933125 YP_002232393.1 CDS glcE NC_011000.1 3604293 3605381 D glycolate oxidase FAD binding subunit 3604293..3605381 Burkholderia cenocepacia J2315 6933630 YP_002232394.1 CDS glcF NC_011000.1 3605389 3606615 D glycolate oxidase iron-sulfur subunit 3605389..3606615 Burkholderia cenocepacia J2315 6933631 YP_002232395.1 CDS BCAL3291 NC_011000.1 3606744 3607442 D hypothetical protein 3606744..3607442 Burkholderia cenocepacia J2315 6933632 YP_002232396.1 CDS BCAL3292 NC_011000.1 3607496 3608308 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 3607496..3608308 Burkholderia cenocepacia J2315 6933126 YP_002232397.1 CDS BCAL3293 NC_011000.1 3608431 3608826 D putative transposase 3608431..3608826 Burkholderia cenocepacia J2315 6933127 YP_002232398.1 CDS BCAL3294 NC_011000.1 3608823 3609170 D putative transposase 3608823..3609170 Burkholderia cenocepacia J2315 6933128 YP_002232399.1 CDS BCAL3295 NC_011000.1 3609222 3610793 D putative transposase 3609222..3610793 Burkholderia cenocepacia J2315 6933129 YP_002232400.1 CDS ubiA NC_011000.1 3610934 3611827 R catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase complement(3610934..3611827) Burkholderia cenocepacia J2315 6933130 YP_002232401.1 CDS BCAL3297 NC_011000.1 3612004 3612492 R putative ferritin DPS-family DNA binding protein complement(3612004..3612492) Burkholderia cenocepacia J2315 6934213 YP_002232402.1 CDS BCAL3298 NC_011000.1 3612631 3612801 R hypothetical protein complement(3612631..3612801) Burkholderia cenocepacia J2315 6933131 YP_002232403.1 CDS katB NC_011000.1 3612912 3615098 R Similar to BCAM2107, 76.119% identity (77.166% ungapped) in 737 aa overlap (1-728:1-736); peroxidase/catalase KatB complement(3612912..3615098) Burkholderia cenocepacia J2315 6933132 YP_002232404.1 CDS oxyR NC_011000.1 3615721 3616680 R oxidative stress regulatory protein complement(3615721..3616680) Burkholderia cenocepacia J2315 6933767 YP_002232405.1 CDS recG NC_011000.1 3616817 3619048 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(3616817..3619048) Burkholderia cenocepacia J2315 6933915 YP_002232406.1 CDS queA NC_011000.1 3619297 3620364 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3619297..3620364 Burkholderia cenocepacia J2315 6934026 YP_002232407.1 CDS tgt NC_011000.1 3620518 3621669 D putative queuine tRNA-ribosyltransferase 3620518..3621669 Burkholderia cenocepacia J2315 6934023 YP_002232408.1 CDS yajC NC_011000.1 3621903 3622226 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 3621903..3622226 Burkholderia cenocepacia J2315 6934178 YP_002232409.1 CDS secD NC_011000.1 3622333 3624354 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3622333..3624354 Burkholderia cenocepacia J2315 6933133 YP_002232410.1 CDS secF NC_011000.1 3624373 3625323 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3624373..3625323 Burkholderia cenocepacia J2315 6934139 YP_002232411.1 CDS BCAL3308 NC_011000.1 3625647 3627056 D putative peptidase 3625647..3627056 Burkholderia cenocepacia J2315 6934141 YP_002232412.1 CDS BCAL3309 NC_011000.1 3627075 3628352 R major facilitator superfamily protein complement(3627075..3628352) Burkholderia cenocepacia J2315 6933134 YP_002232413.1 CDS BCAL3310 NC_011000.1 3628545 3629126 R hypothetical protein complement(3628545..3629126) Burkholderia cenocepacia J2315 6933135 YP_002232414.1 CDS BCAL3311 NC_011000.1 3629192 3629752 R hypothetical protein complement(3629192..3629752) Burkholderia cenocepacia J2315 6933136 YP_002232415.1 CDS BCAL3312 NC_011000.1 3629761 3630321 R putative cytochrome b-561 membrane protein complement(3629761..3630321) Burkholderia cenocepacia J2315 6933137 YP_002232416.1 CDS BCAL3313 NC_011000.1 3630581 3631246 D hypothetical protein 3630581..3631246 Burkholderia cenocepacia J2315 6933138 YP_002232417.1 CDS BCAL3314 NC_011000.1 3631255 3631878 D hypothetical protein 3631255..3631878 Burkholderia cenocepacia J2315 6933139 YP_002232418.1 CDS BCAL3315 NC_011000.1 3631871 3633490 D mammalian cell entry related membrane protein 3631871..3633490 Burkholderia cenocepacia J2315 6933140 YP_002232419.1 CDS BCAL3316 NC_011000.1 3633487 3634212 D putative lipoprotein 3633487..3634212 Burkholderia cenocepacia J2315 6933141 YP_002232420.1 CDS BCAL3317 NC_011000.1 3634691 3636805 D hypothetical protein 3634691..3636805 Burkholderia cenocepacia J2315 6933142 YP_002232421.1 CDS BCAL3318 NC_011000.1 3636958 3638259 D putative RNA-methylase protein 3636958..3638259 Burkholderia cenocepacia J2315 6933143 YP_002232422.1 CDS BCAL3319 NC_011000.1 3638333 3638797 R hypothetical protein complement(3638333..3638797) Burkholderia cenocepacia J2315 6933144 YP_002232423.1 CDS BCAL3320 NC_011000.1 3638790 3639122 R ArsR family regulatory protein complement(3638790..3639122) Burkholderia cenocepacia J2315 6933145 YP_002232424.1 CDS BCAL3321 NC_011000.1 3639300 3639704 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 3639300..3639704 Burkholderia cenocepacia J2315 6933146 YP_002232425.1 CDS BCAL3322 NC_011000.1 3639778 3640464 D putative DNA-binding protein 3639778..3640464 Burkholderia cenocepacia J2315 6933147 YP_002232426.1 CDS BCAL3323 NC_011000.1 3640538 3641461 R nitrilase complement(3640538..3641461) Burkholderia cenocepacia J2315 6933148 YP_002232427.1 CDS BCAL3324 NC_011000.1 3641551 3642471 D LysR family regulatory protein 3641551..3642471 Burkholderia cenocepacia J2315 6933149 YP_002232428.1 CDS pntB NC_011000.1 3642560 3644014 R NAD(P) transhydrogenase subunit beta complement(3642560..3644014) Burkholderia cenocepacia J2315 6933150 YP_002232429.1 CDS pntAB NC_011000.1 3644011 3644337 R NAD(P) transhydrogenase subunit alpha complement(3644011..3644337) Burkholderia cenocepacia J2315 6933972 YP_002232430.1 CDS pntAA NC_011000.1 3644349 3645488 R NAD(P) transhydrogenase subunit alpha complement(3644349..3645488) Burkholderia cenocepacia J2315 6933971 YP_002232431.1 CDS BCAL3328 NC_011000.1 3645768 3646277 D putative hydrolase 3645768..3646277 Burkholderia cenocepacia J2315 6933970 YP_002232432.1 CDS mnmA NC_011000.1 3646274 3647449 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 3646274..3647449 Burkholderia cenocepacia J2315 6933151 YP_002232433.1 CDS BCAL3330 NC_011000.1 3647535 3649187 D putative glutamate synthase 3647535..3649187 Burkholderia cenocepacia J2315 6934199 YP_002232434.1 CDS BCAL3331 NC_011000.1 3649291 3649902 R putative glutathione S-transferase complement(3649291..3649902) Burkholderia cenocepacia J2315 6933152 YP_002232435.1 CDS BCAL3332 NC_011000.1 3650090 3651475 D subfamily M24B metallo peptidase; aminopeptidase P 3650090..3651475 Burkholderia cenocepacia J2315 6933153 YP_002232436.1 CDS BCAL3333 NC_011000.1 3651513 3652700 D hypothetical protein 3651513..3652700 Burkholderia cenocepacia J2315 6933154 YP_002232437.1 CDS BCAL3334 NC_011000.1 3652829 3653896 D putative nitrogen regulation-related protein 3652829..3653896 Burkholderia cenocepacia J2315 6933155 YP_002232438.1 CDS fis NC_011000.1 3653893 3654126 D DNA-binding protein Fis 3653893..3654126 Burkholderia cenocepacia J2315 6933156 YP_002232439.1 CDS purH NC_011000.1 3654171 3655736 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3654171..3655736 Burkholderia cenocepacia J2315 6933562 YP_002232440.1 CDS ruvC NC_011000.1 3655891 3656433 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3655891..3656433 Burkholderia cenocepacia J2315 6934003 YP_002232441.1 CDS ruvA NC_011000.1 3656605 3657186 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3656605..3657186 Burkholderia cenocepacia J2315 6934130 YP_002232442.1 CDS ruvB NC_011000.1 3657295 3658365 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3657295..3658365 Burkholderia cenocepacia J2315 6934128 YP_002232443.1 CDS BCAL3340 NC_011000.1 3658389 3659342 D hypothetical protein 3658389..3659342 Burkholderia cenocepacia J2315 6934129 YP_002232444.1 CDS BCAL3341 NC_011000.1 3659403 3660620 D putative lipoprotein 3659403..3660620 Burkholderia cenocepacia J2315 6933157 YP_002232445.1 CDS BCAL3342 NC_011000.1 3660683 3661345 R putative phosphoglycerate mutase complement(3660683..3661345) Burkholderia cenocepacia J2315 6933158 YP_002232446.1 CDS dtd NC_011000.1 3661369 3661827 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(3661369..3661827) Burkholderia cenocepacia J2315 6933159 YP_002232447.1 CDS tyrZ NC_011000.1 3661824 3663065 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(3661824..3663065) Burkholderia cenocepacia J2315 6933522 YP_002232448.1 CDS anmK NC_011000.1 3663208 3664356 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3663208..3664356 Burkholderia cenocepacia J2315 6934212 YP_002232449.1 CDS BCAL3346 NC_011000.1 3664464 3664835 R essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA complement(3664464..3664835) Burkholderia cenocepacia J2315 6933160 YP_002232450.1 CDS rpsI NC_011000.1 3665063 3665455 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(3665063..3665455) Burkholderia cenocepacia J2315 6933161 YP_002232451.1 CDS rplM NC_011000.1 3665467 3665895 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(3665467..3665895) Burkholderia cenocepacia J2315 6934108 YP_002232452.1 CDS BCAL3348a NC_011000.1 3666207 3666512 D hypothetical protein 3666207..3666512 Burkholderia cenocepacia J2315 6934068 YP_002232453.1 CDS BCAL3349 NC_011000.1 3666923 3667387 D putative OsmC-like protein 3666923..3667387 Burkholderia cenocepacia J2315 6933162 YP_002232454.1 CDS BCAL3350 NC_011000.1 3667878 3668768 R hypothetical protein complement(3667878..3668768) Burkholderia cenocepacia J2315 6933403 YP_002232455.1 CDS pyrC NC_011000.1 3668765 3669859 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(3668765..3669859) Burkholderia cenocepacia J2315 6933164 YP_002232456.1 CDS BCAL3352 NC_011000.1 3670053 3670949 D family C44 non-peptidase-like protein 3670053..3670949 Burkholderia cenocepacia J2315 6934014 YP_002232457.1 CDS BCAL3353 NC_011000.1 3671565 3676847 D putative outer membrane autotransporter 3671565..3676847 Burkholderia cenocepacia J2315 6933165 YP_002232458.1 CDS gltK NC_011000.1 3677653 3678330 R glutamate/aspartate transport system permease complement(3677653..3678330) Burkholderia cenocepacia J2315 6933655 YP_002232459.1 CDS gltJ NC_011000.1 3678330 3679070 R glutamate/aspartate transport system permease complement(3678330..3679070) Burkholderia cenocepacia J2315 6933654 YP_002232460.1 CDS gltI NC_011000.1 3679155 3680048 R periplasmic glutamate/aspartate-binding protein complement(3679155..3680048) Burkholderia cenocepacia J2315 6933653 YP_002232461.1 CDS BCAL3359 NC_011000.1 3680310 3681596 R putative glutamate dehydrogenase complement(3680310..3681596) Burkholderia cenocepacia J2315 6933652 YP_002232462.1 CDS BCAL3360 NC_011000.1 3681874 3682836 R LysR family regulatory protein complement(3681874..3682836) Burkholderia cenocepacia J2315 6933167 YP_002232463.1 CDS purB NC_011000.1 3683101 3684489 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 3683101..3684489 Burkholderia cenocepacia J2315 6933168 YP_002232464.1 CDS BCAL3362 NC_011000.1 3684556 3685977 R putative oxidoreductase complement(3684556..3685977) Burkholderia cenocepacia J2315 6933999 YP_002232465.1 CDS BCAL3363 NC_011000.1 3686254 3686901 D TetR family regulatory protein 3686254..3686901 Burkholderia cenocepacia J2315 6933169 YP_002232466.1 CDS BCAL3364 NC_011000.1 3686973 3687476 R putative gluconokinase complement(3686973..3687476) Burkholderia cenocepacia J2315 6933170 YP_002232467.1 CDS BCAL3365 NC_011000.1 3687490 3688851 R putative gluconate permease complement(3687490..3688851) Burkholderia cenocepacia J2315 6933171 YP_002232468.1 CDS eda NC_011000.1 3689071 3689697 R KHG/KDPG aldolase complement(3689071..3689697) Burkholderia cenocepacia J2315 6933172 YP_002232469.1 CDS edd NC_011000.1 3689717 3691573 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(3689717..3691573) Burkholderia cenocepacia J2315 6933527 YP_002232470.1 CDS BCAL3368 NC_011000.1 3691868 3692716 D putative regulatory protein 3691868..3692716 Burkholderia cenocepacia J2315 6933528 YP_002232471.1 CDS BCAL3369 NC_011000.1 3692825 3693247 R hypothetical protein complement(3692825..3693247) Burkholderia cenocepacia J2315 6933173 YP_002232472.1 CDS proA NC_011000.1 3693271 3694578 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(3693271..3694578) Burkholderia cenocepacia J2315 6933174 YP_002232473.1 CDS holA NC_011000.1 3694752 3695846 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(3694752..3695846) Burkholderia cenocepacia J2315 6933988 YP_002232474.1 CDS BCAL3372 NC_011000.1 3695865 3696416 R putative lipoprotein complement(3695865..3696416) Burkholderia cenocepacia J2315 6933175 YP_002232475.1 CDS leuS NC_011000.1 3696455 3699049 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(3696455..3699049) Burkholderia cenocepacia J2315 6933176 YP_002232476.1 CDS BCAL3374 NC_011000.1 3699314 3699772 R putative transport-related membrane protein complement(3699314..3699772) Burkholderia cenocepacia J2315 6933787 YP_002232477.1 CDS BCAL3375 NC_011000.1 3699797 3700465 R putative transport-related membrane protein complement(3699797..3700465) Burkholderia cenocepacia J2315 6933177 YP_002232478.1 CDS dapB NC_011000.1 3700484 3701281 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(3700484..3701281) Burkholderia cenocepacia J2315 6933178 YP_002232479.1 CDS omlA NC_011000.1 3701347 3702144 R putative outer membrane protein complement(3701347..3702144) Burkholderia cenocepacia J2315 6933490 YP_002232480.1 CDS fur NC_011000.1 3702286 3702714 D ferric uptake regulator 3702286..3702714 Burkholderia cenocepacia J2315 6933892 YP_002232481.1 CDS BCAL3379 NC_011000.1 3702809 3703342 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(3702809..3703342) Burkholderia cenocepacia J2315 6933614 YP_002232482.1 CDS BCAL3380 NC_011000.1 3703357 3704364 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(3703357..3704364) Burkholderia cenocepacia J2315 6933179 YP_002232483.1 CDS dctA NC_011000.1 3704469 3705788 R involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA complement(3704469..3705788) Burkholderia cenocepacia J2315 6933180 YP_002232484.1 CDS BCAL3382 NC_011000.1 3706001 3706723 D GntR family regulatory protein 3706001..3706723 Burkholderia cenocepacia J2315 6933496 YP_002232485.1 CDS BCAL3383 NC_011000.1 3706754 3707680 R controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR complement(3706754..3707680) Burkholderia cenocepacia J2315 6933181 YP_002232486.1 CDS BCAL3384 NC_011000.1 3707954 3709153 D major facilitator superfamily protein 3707954..3709153 Burkholderia cenocepacia J2315 6933182 YP_002232487.1 CDS idnD NC_011000.1 3709279 3710337 R putative L-idonate 5-dehydrogenase complement(3709279..3710337) Burkholderia cenocepacia J2315 6933183 YP_002232488.1 CDS idnO NC_011000.1 3710351 3711124 R gluconate 5-dehydrogenase complement(3710351..3711124) Burkholderia cenocepacia J2315 6933745 YP_002232489.1 CDS BCAL3387 NC_011000.1 3711275 3712165 D LysR family regulatory protein 3711275..3712165 Burkholderia cenocepacia J2315 6933746 YP_002232490.1 CDS gapA NC_011000.1 3712243 3713253 R glyceraldehyde 3-phosphate dehydrogenase 1 complement(3712243..3713253) Burkholderia cenocepacia J2315 6933184 YP_002232491.1 CDS tktA NC_011000.1 3713341 3715413 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(3713341..3715413) Burkholderia cenocepacia J2315 6933619 YP_002232492.1 CDS BCAL3390 NC_011000.1 3715629 3716486 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3715629..3716486 Burkholderia cenocepacia J2315 6934189 YP_002232493.1 CDS BCAL3391 NC_011000.1 3716575 3716991 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 3716575..3716991 Burkholderia cenocepacia J2315 6933185 YP_002232494.1 CDS BCAL3392 NC_011000.1 3717036 3717776 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3717036..3717776 Burkholderia cenocepacia J2315 6933186 YP_002232495.1 CDS BCAL3393 NC_011000.1 3717931 3718494 R hypothetical protein complement(3717931..3718494) Burkholderia cenocepacia J2315 6933187 YP_002232496.1 CDS BCAL3394 NC_011000.1 3718511 3718942 R putative exported ribonuclease complement(3718511..3718942) Burkholderia cenocepacia J2315 6933188 YP_002232497.1 CDS maeB NC_011000.1 3719319 3721676 R NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme complement(3719319..3721676) Burkholderia cenocepacia J2315 6933189 YP_002232498.1 CDS BCAL3396 NC_011000.1 3721796 3722794 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 3721796..3722794 Burkholderia cenocepacia J2315 6933802 YP_002232499.1 CDS BCAL3397 NC_011000.1 3722784 3723329 D putative phosphatidylglycerophosphatase 3722784..3723329 Burkholderia cenocepacia J2315 6933190 YP_002232500.1 CDS BCAL3398 NC_011000.1 3723361 3723861 D putative competence-damaged related protein 3723361..3723861 Burkholderia cenocepacia J2315 6933191 YP_002232501.1 CDS BCAL3399 NC_011000.1 3723894 3724952 R hypothetical protein complement(3723894..3724952) Burkholderia cenocepacia J2315 6933192 YP_002232502.1 CDS pyrF NC_011000.1 3725193 3726020 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(3725193..3726020) Burkholderia cenocepacia J2315 6933193 YP_002232503.1 CDS BCAL3401 NC_011000.1 3726060 3727019 R putative epimerase complement(3726060..3727019) Burkholderia cenocepacia J2315 6933194 YP_002232504.1 CDS BCAL3402 NC_011000.1 3727172 3727978 R putative dehydrogenase complement(3727172..3727978) Burkholderia cenocepacia J2315 6933195 YP_002232505.1 CDS araH NC_011000.1 3728007 3729023 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease complement(3728007..3729023) Burkholderia cenocepacia J2315 6933196 YP_002232506.1 CDS araG NC_011000.1 3729093 3730604 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein complement(3729093..3730604) Burkholderia cenocepacia J2315 6933302 YP_002232507.1 CDS BCAL3405 NC_011000.1 3730672 3731667 R putative L-arabinose transport system, exported protein complement(3730672..3731667) Burkholderia cenocepacia J2315 6933301 YP_002232508.1 CDS BCAL3406 NC_011000.1 3731779 3732558 R short chain dehydrogenase complement(3731779..3732558) Burkholderia cenocepacia J2315 6933197 YP_002232509.1 CDS BCAL3407 NC_011000.1 3732558 3733235 R catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(3732558..3733235) Burkholderia cenocepacia J2315 6933198 YP_002232510.1 CDS BCAL3408 NC_011000.1 3733258 3734283 R putative galactonokinase complement(3733258..3734283) Burkholderia cenocepacia J2315 6933199 YP_002232511.1 CDS BCAL3409 NC_011000.1 3734280 3735179 R IclR family regulatory protein complement(3734280..3735179) Burkholderia cenocepacia J2315 6933200 YP_002232512.1 CDS BCAL3410 NC_011000.1 3735531 3735932 R hypothetical protein complement(3735531..3735932) Burkholderia cenocepacia J2315 6933201 YP_002232513.1 CDS BCAL3411 NC_011000.1 3736017 3737627 R family S10 serine peptidase complement(3736017..3737627) Burkholderia cenocepacia J2315 6933202 YP_002232514.1 CDS mtgA NC_011000.1 3738054 3738755 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(3738054..3738755) Burkholderia cenocepacia J2315 6933203 YP_002232515.1 CDS aroE NC_011000.1 3738806 3739672 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3738806..3739672) Burkholderia cenocepacia J2315 6933204 YP_002232516.1 CDS BCAL3414 NC_011000.1 3739669 3741753 R putative exoribonuclease II complement(3739669..3741753) Burkholderia cenocepacia J2315 6933314 YP_002232517.1 CDS BCAL3415 NC_011000.1 3741833 3742402 R hypothetical protein complement(3741833..3742402) Burkholderia cenocepacia J2315 6933205 YP_002232518.1 CDS mpl NC_011000.1 3742399 3743784 R UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(3742399..3743784) Burkholderia cenocepacia J2315 6933206 YP_002232519.1 CDS BCAL3417 NC_011000.1 3744031 3744675 D hypothetical protein 3744031..3744675 Burkholderia cenocepacia J2315 6933842 YP_002232520.1 CDS BCAL3418 NC_011000.1 3744683 3745234 D putative thioredoxin protein 3744683..3745234 Burkholderia cenocepacia J2315 6933207 YP_002232521.1 CDS aroQ1 NC_011000.1 3745429 3745881 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3745429..3745881 Burkholderia cenocepacia J2315 6933208 YP_002232522.1 CDS accB NC_011000.1 3745930 3746421 D composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3745930..3746421 Burkholderia cenocepacia J2315 6933317 YP_002232523.1 CDS accC NC_011000.1 3746507 3747874 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 3746507..3747874 Burkholderia cenocepacia J2315 6933271 YP_002232524.1 CDS prmA NC_011000.1 3747877 3748779 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 3747877..3748779 Burkholderia cenocepacia J2315 6933273 YP_002232525.1 CDS BCAL3423 NC_011000.1 3748825 3750222 D hypothetical protein 3748825..3750222 Burkholderia cenocepacia J2315 6933987 YP_002232526.1 CDS tpx NC_011000.1 3750294 3750797 D thiol peroxidase 3750294..3750797 Burkholderia cenocepacia J2315 6933209 YP_002232527.1 CDS BCAL3425 NC_011000.1 3750883 3751821 D putative sugar kinase 3750883..3751821 Burkholderia cenocepacia J2315 6934196 YP_002232528.1 CDS BCAL3426 NC_011000.1 3751841 3752314 D putative lipoprotein 3751841..3752314 Burkholderia cenocepacia J2315 6933210 YP_002232529.1 CDS hctB NC_011000.1 3752545 3753195 R histone H1-like protein complement(3752545..3753195) Burkholderia cenocepacia J2315 6933211 YP_002232530.1 CDS nrdB NC_011000.1 3753633 3754844 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(3753633..3754844) Burkholderia cenocepacia J2315 6933695 YP_002232531.1 CDS BCAL3429 NC_011000.1 3755210 3758221 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(3755210..3758221) Burkholderia cenocepacia J2315 6933875 YP_002232532.1 CDS ampD NC_011000.1 3758667 3759257 R N-acetyl-anhydromuranmyl-L-alanine amidase complement(3758667..3759257) Burkholderia cenocepacia J2315 6933212 YP_002232533.1 CDS BCAL3431 NC_011000.1 3759254 3759568 R hypothetical protein complement(3759254..3759568) Burkholderia cenocepacia J2315 6933294 YP_002232534.1 CDS BCAL3432 NC_011000.1 3759582 3760475 R cytochrome c assembly protein complement(3759582..3760475) Burkholderia cenocepacia J2315 6933213 YP_002232535.1 CDS ffh NC_011000.1 3760565 3761932 D signal recognition particle protein 3760565..3761932 Burkholderia cenocepacia J2315 6933214 YP_002232536.1 CDS BCAL3434 NC_011000.1 3762000 3762578 D Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 3762000..3762578 Burkholderia cenocepacia J2315 6933561 YP_002232537.1 CDS BCAL3435 NC_011000.1 3762663 3763271 R MarC family integral membrane protein complement(3762663..3763271) Burkholderia cenocepacia J2315 6933215 YP_002232538.1 CDS proS NC_011000.1 3763293 3765029 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3763293..3765029) Burkholderia cenocepacia J2315 6933216 YP_002232539.1 CDS BCAL3437 NC_011000.1 3765258 3765902 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3765258..3765902 Burkholderia cenocepacia J2315 6933990 YP_002232540.1 CDS BCAL3438 NC_011000.1 3765966 3766523 D putative lipoprotein 3765966..3766523 Burkholderia cenocepacia J2315 6933217 YP_002232541.1 CDS proB NC_011000.1 3766619 3767737 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(3766619..3767737) Burkholderia cenocepacia J2315 6933218 YP_002232542.1 CDS obgE NC_011000.1 3767827 3768939 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(3767827..3768939) Burkholderia cenocepacia J2315 6933989 YP_002232543.1 CDS rpmA NC_011000.1 3769126 3769389 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3769126..3769389) Burkholderia cenocepacia J2315 6933219 YP_002232544.1 CDS rplU NC_011000.1 3769414 3769725 R 50S ribosomal protein L21 complement(3769414..3769725) Burkholderia cenocepacia J2315 6934081 YP_002232545.1 CDS ispB NC_011000.1 3769936 3770931 D octaprenyl-diphosphate synthase 3769936..3770931 Burkholderia cenocepacia J2315 6934076 YP_002232546.1 CDS BCAL3444 NC_011000.1 3771298 3772590 D hypothetical protein 3771298..3772590 Burkholderia cenocepacia J2315 6933404 YP_002232547.1 CDS BCAL3445 NC_011000.1 3772701 3773987 D Possible alternative translational start after codon 4; putative type IV pilus assembly protein 3772701..3773987 Burkholderia cenocepacia J2315 6933220 YP_002232548.1 CDS pilC NC_011000.1 3773996 3775201 D type IV pilus assembly protein PilC 3773996..3775201 Burkholderia cenocepacia J2315 6933221 YP_002232549.1 CDS gspO NC_011000.1 3775247 3776158 D subfamily A24A aspartic peptidase; type IV prepilin leader peptide type M1 3775247..3776158 Burkholderia cenocepacia J2315 6933963 YP_002232550.1 CDS coaE NC_011000.1 3776160 3776768 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3776160..3776768 Burkholderia cenocepacia J2315 6933687 YP_002232551.1 CDS BCAL3449 NC_011000.1 3776878 3777633 D hypothetical protein 3776878..3777633 Burkholderia cenocepacia J2315 6933444 YP_002232552.1 CDS BCAL3450 NC_011000.1 3777923 3778366 R NUDIX hydrolase complement(3777923..3778366) Burkholderia cenocepacia J2315 6933222 YP_002232553.1 CDS BCAL3451 NC_011000.1 3778363 3779232 R hypothetical protein complement(3778363..3779232) Burkholderia cenocepacia J2315 6933223 YP_002232554.1 CDS argJ NC_011000.1 3779252 3780493 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein complement(3779252..3780493) Burkholderia cenocepacia J2315 6933224 YP_002232555.1 CDS secA NC_011000.1 3780638 3783439 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(3780638..3783439) Burkholderia cenocepacia J2315 6933307 YP_002232556.1 CDS BCAL3454 NC_011000.1 3783696 3784172 D hypothetical protein 3783696..3784172 Burkholderia cenocepacia J2315 6934137 YP_002232557.1 CDS lpxC NC_011000.1 3784254 3785171 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(3784254..3785171) Burkholderia cenocepacia J2315 6933225 YP_002232558.1 CDS BCAL3456 NC_011000.1 3785412 3785918 R putative thioredoxin reductase complement(3785412..3785918) Burkholderia cenocepacia J2315 6933535 YP_002232559.1 CDS ftsZ NC_011000.1 3786116 3787312 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(3786116..3787312) Burkholderia cenocepacia J2315 6933226 YP_002232560.1 CDS ftsA NC_011000.1 3787425 3788657 R cell division protein FtsA complement(3787425..3788657) Burkholderia cenocepacia J2315 6933612 YP_002232561.1 CDS ftsQ NC_011000.1 3788684 3789436 R cell division protein FtsQ complement(3788684..3789436) Burkholderia cenocepacia J2315 6933606 YP_002232562.1 CDS ddl NC_011000.1 3789456 3790397 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(3789456..3790397) Burkholderia cenocepacia J2315 6933610 YP_002232563.1 CDS murC NC_011000.1 3790399 3791796 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(3790399..3791796) Burkholderia cenocepacia J2315 6933499 YP_002232564.1 CDS murG NC_011000.1 3791793 3792896 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(3791793..3792896) Burkholderia cenocepacia J2315 6933859 YP_002232565.1 CDS ftsW NC_011000.1 3792893 3794176 R cell division protein FtsW complement(3792893..3794176) Burkholderia cenocepacia J2315 6933863 YP_002232566.1 CDS murD NC_011000.1 3794173 3795660 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3794173..3795660) Burkholderia cenocepacia J2315 6933611 YP_002232567.1 CDS mraY NC_011000.1 3795713 3796882 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(3795713..3796882) Burkholderia cenocepacia J2315 6933860 YP_002232568.1 CDS murF NC_011000.1 3796899 3798305 R UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diami nopimelate--D-alanyl-D-alanyl ligase complement(3796899..3798305) Burkholderia cenocepacia J2315 6933844 YP_002232569.1 CDS murE NC_011000.1 3798302 3799840 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(3798302..3799840) Burkholderia cenocepacia J2315 6933862 YP_002232570.1 CDS ftsI NC_011000.1 3799837 3801684 R peptidoglycan synthetase FtsI complement(3799837..3801684) Burkholderia cenocepacia J2315 6933861 YP_002232571.1 CDS ftsL NC_011000.1 3801681 3802022 R cell division protein FtsL complement(3801681..3802022) Burkholderia cenocepacia J2315 6933608 YP_002232572.1 CDS mraW NC_011000.1 3802019 3802960 R S-adenosyl-methyltransferase MraW complement(3802019..3802960) Burkholderia cenocepacia J2315 6933609 YP_002232573.1 CDS mraZ NC_011000.1 3802984 3803412 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(3802984..3803412) Burkholderia cenocepacia J2315 6933843 YP_002232574.1 CDS BCAL3472 NC_011000.1 3803799 3804425 R hypothetical protein complement(3803799..3804425) Burkholderia cenocepacia J2315 6933845 YP_002232575.1 CDS BCAL3473 NC_011000.1 3804702 3805853 D putative outer membrane porin 3804702..3805853 Burkholderia cenocepacia J2315 6933227 YP_002232576.1 CDS fadD NC_011000.1 3806110 3807783 R activates fatty acids by binding to coenzyme A; Long-chain-fatty-acid--CoA ligase complement(3806110..3807783) Burkholderia cenocepacia J2315 6933228 YP_002232577.1 CDS BCAL3475 NC_011000.1 3807921 3809996 R putative molybdopterin-containing oxidoreductase complement(3807921..3809996) Burkholderia cenocepacia J2315 6933551 YP_002232578.1 CDS BCAL3476 NC_011000.1 3815878 3816408 R putative type-b cytochrome complement(3815878..3816408) Burkholderia cenocepacia J2315 6933229 YP_002232579.1 CDS BCAL3477 NC_011000.1 3816408 3817502 R putative catalase complement(3816408..3817502) Burkholderia cenocepacia J2315 6933230 YP_002232580.1 CDS BCAL3478 NC_011000.1 3817661 3818182 D putative RNA polymerase sigma factor 3817661..3818182 Burkholderia cenocepacia J2315 6933231 YP_002232581.1 CDS BCAL3479 NC_011000.1 3818179 3818937 D putative transmembrane regulator 3818179..3818937 Burkholderia cenocepacia J2315 6933232 YP_002232582.1 CDS BCAL3480 NC_011000.1 3819525 3819842 R hypothetical protein complement(3819525..3819842) Burkholderia cenocepacia J2315 6933233 YP_002232583.1 CDS BCAL3481 NC_011000.1 3820038 3820283 R hypothetical protein complement(3820038..3820283) Burkholderia cenocepacia J2315 6933234 YP_002232584.1 CDS BCAL3482 NC_011000.1 3820302 3820631 R hypothetical protein complement(3820302..3820631) Burkholderia cenocepacia J2315 6933235 YP_002232585.1 CDS BCAL3483 NC_011000.1 3820663 3820923 R hypothetical protein complement(3820663..3820923) Burkholderia cenocepacia J2315 6933236 YP_002232586.1 CDS BCAL3484 NC_011000.1 3821521 3822338 R transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3'; putative transposase complement(join(3821521..3821988,3821985..3822338)) Burkholderia cenocepacia J2315 6933237 YP_002232587.1 CDS BCAL3485 NC_011000.1 3822813 3823328 D hypothetical protein 3822813..3823328 Burkholderia cenocepacia J2315 6933405 YP_002232588.1 CDS BCAL3486 NC_011000.1 3823432 3824313 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ complement(3823432..3824313) Burkholderia cenocepacia J2315 6933239 YP_002232589.1 CDS BCAL3487 NC_011000.1 3824313 3824789 R carboxymuconolactone decarboxylase family protein complement(3824313..3824789) Burkholderia cenocepacia J2315 6933240 YP_002232590.1 CDS BCAL3488 NC_011000.1 3825355 3826596 D hypothetical protein 3825355..3826596 Burkholderia cenocepacia J2315 6933241 YP_002232591.1 CDS BCAL3489 NC_011000.1 3826580 3827593 D hypothetical protein 3826580..3827593 Burkholderia cenocepacia J2315 6933242 YP_002232592.1 CDS BCAL3490 NC_011000.1 3827890 3828192 D hypothetical protein 3827890..3828192 Burkholderia cenocepacia J2315 6933243 YP_002232593.1 CDS BCAL3491 NC_011000.1 3828246 3828500 D hypothetical protein 3828246..3828500 Burkholderia cenocepacia J2315 6933244 YP_002232594.1 CDS BCAL3492 NC_011000.1 3828688 3829071 D hypothetical protein 3828688..3829071 Burkholderia cenocepacia J2315 6933245 YP_002232595.1 CDS BCAL3493 NC_011000.1 3829339 3832371 R type III restriction system endonuclease complement(3829339..3832371) Burkholderia cenocepacia J2315 6933246 YP_002232596.1 CDS BCAL3494 NC_011000.1 3832371 3834377 R type III restriction-modification system methylase complement(3832371..3834377) Burkholderia cenocepacia J2315 6933247 YP_002232597.1 CDS BCAL3495 NC_011000.1 3834736 3835863 R outer membrane porin lipoprotein complement(3834736..3835863) Burkholderia cenocepacia J2315 6933248 YP_002232598.1 CDS BCAL3496 NC_011000.1 3836146 3836823 R two-component regulatory system, response regulator protein complement(3836146..3836823) Burkholderia cenocepacia J2315 6933249 YP_002232599.1 CDS BCAL3497 NC_011000.1 3836837 3838204 R two-component regulatory system, sensor kinase protein complement(3836837..3838204) Burkholderia cenocepacia J2315 6933250 YP_002232600.1 CDS BCAL3498 NC_011000.1 3838292 3839149 R binding-protein-dependent transport systems inner membrane protein complement(3838292..3839149) Burkholderia cenocepacia J2315 6933251 YP_002232601.1 CDS BCAL3499 NC_011000.1 3839199 3839996 R ABC transporter ATP-binding protein complement(3839199..3839996) Burkholderia cenocepacia J2315 6933252 YP_002232602.1 CDS BCAL3500 NC_011000.1 3840107 3841111 R putative transport protein complement(3840107..3841111) Burkholderia cenocepacia J2315 6933253 YP_002232603.1 CDS fliR NC_011000.1 3841296 3842078 R flagellar biosynthetic protein FliR complement(3841296..3842078) Burkholderia cenocepacia J2315 6933254 YP_002232604.1 CDS fliQ NC_011000.1 3842109 3842381 R with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ complement(3842109..3842381) Burkholderia cenocepacia J2315 6933598 YP_002232605.1 CDS fliP NC_011000.1 3842401 3843162 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(3842401..3843162) Burkholderia cenocepacia J2315 6933597 YP_002232606.1 CDS fliO NC_011000.1 3843199 3843774 R Internal region is similar to Escherichia coli flagellar protein FliO UniProt:P22586 (EMBL:AP009048 (121 aa) fasta scores: E()=9.1e-07, 40.816% id in 98 aa; flagellar protein FliO complement(3843199..3843774) Burkholderia cenocepacia J2315 6933596 YP_002232607.1 CDS fliN NC_011000.1 3843771 3844226 R flagellar motor switch protein FliN complement(3843771..3844226) Burkholderia cenocepacia J2315 6933595 YP_002232608.1 CDS fliM NC_011000.1 3844252 3845250 R with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM complement(3844252..3845250) Burkholderia cenocepacia J2315 6933594 YP_002232609.1 CDS fliL NC_011000.1 3845273 3845773 R interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL complement(3845273..3845773) Burkholderia cenocepacia J2315 6933593 YP_002232610.1 CDS BCAL3508 NC_011000.1 3846014 3846736 R LrgB family protein complement(3846014..3846736) Burkholderia cenocepacia J2315 6933592 YP_002232611.1 CDS BCAL3509 NC_011000.1 3846750 3847223 R LrgA family protein complement(3846750..3847223) Burkholderia cenocepacia J2315 6933255 YP_002232612.1 CDS BCAL3510 NC_011000.1 3847365 3848291 D LysR family regulatory protein 3847365..3848291 Burkholderia cenocepacia J2315 6933256 YP_002232613.1 CDS BCAL3510a NC_011000.1 3848322 3848573 R hypothetical protein complement(3848322..3848573) Burkholderia cenocepacia J2315 6933257 YP_002232614.1 CDS BCAL3511 NC_011000.1 3848670 3850232 R multidrug resistance transporter protein complement(3848670..3850232) Burkholderia cenocepacia J2315 6933258 YP_002232615.1 CDS BCAL3512 NC_011000.1 3850410 3850898 R MarR family regulatory protein complement(3850410..3850898) Burkholderia cenocepacia J2315 6933259 YP_002232616.1 CDS BCAL3513 NC_011000.1 3851073 3851357 D hypothetical protein 3851073..3851357 Burkholderia cenocepacia J2315 6933260 YP_002232617.1 CDS BCAL3514 NC_011000.1 3851642 3853213 D outer membrane efflux protein 3851642..3853213 Burkholderia cenocepacia J2315 6933261 YP_002232618.1 CDS gspN NC_011000.1 3853239 3854063 R type II secretion system protein N complement(3853239..3854063) Burkholderia cenocepacia J2315 6933262 YP_002232619.1 CDS gspM NC_011000.1 3854064 3854570 R type II secretion system protein M complement(3854064..3854570) Burkholderia cenocepacia J2315 6933686 YP_002232620.1 CDS gspK NC_011000.1 3855857 3856966 R type II secretion system protein K complement(3855857..3856966) Burkholderia cenocepacia J2315 6933684 YP_002232621.1 CDS gspJ NC_011000.1 3856969 3857640 R type II secretion system protein J complement(3856969..3857640) Burkholderia cenocepacia J2315 6933683 YP_002232622.1 CDS gspI NC_011000.1 3857648 3858049 R type II secretion system protein I complement(3857648..3858049) Burkholderia cenocepacia J2315 6933682 YP_002232623.1 CDS gspH NC_011000.1 3858052 3858525 R type II secretion system protein H complement(3858052..3858525) Burkholderia cenocepacia J2315 6933681 YP_002232624.1 CDS gspG NC_011000.1 3858661 3859113 R type II secretion system protein G complement(3858661..3859113) Burkholderia cenocepacia J2315 6933680 YP_002232625.1 CDS gspC NC_011000.1 3859289 3859699 D putative type II secretion system protein 3859289..3859699 Burkholderia cenocepacia J2315 6933679 YP_002232626.1 CDS gspF NC_011000.1 3859731 3860948 R type II secretion system protein F complement(3859731..3860948) Burkholderia cenocepacia J2315 6933675 YP_002232627.1 CDS gspE NC_011000.1 3860953 3862443 R type II secretion system protein E complement(3860953..3862443) Burkholderia cenocepacia J2315 6933678 YP_002232628.1 CDS gspD NC_011000.1 3862449 3864782 R type II secretion system protein D complement(3862449..3864782) Burkholderia cenocepacia J2315 6933677 YP_002232629.1 CDS BCAL3528 NC_011000.1 3865151 3865645 D putative invasion protein 3865151..3865645 Burkholderia cenocepacia J2315 6933676 YP_002232630.1 CDS BCAL3529 NC_011000.1 3865811 3867112 D putative cobalamin synthesis protein/P47K 3865811..3867112 Burkholderia cenocepacia J2315 6933263 YP_002232631.1 CDS hupA NC_011000.1 3867242 3867520 R DNA-binding protein HU-alpha complement(3867242..3867520) Burkholderia cenocepacia J2315 6933264 YP_002232632.1 CDS mnmC NC_011000.1 3867909 3869840 D catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 3867909..3869840 Burkholderia cenocepacia J2315 6933738 YP_001989036.1 CDS BCAM0001 NC_011001.1 230 829 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 230..829 Burkholderia cenocepacia J2315 6927816 YP_002232633.1 CDS BCAM0001A NC_011001.1 831 1022 D hypothetical protein 831..1022 Burkholderia cenocepacia J2315 6927817 YP_002232634.1 CDS BCAM0002 NC_011001.1 1160 1516 R ArsC family arsenate reductase complement(1160..1516) Burkholderia cenocepacia J2315 6927818 YP_002232635.1 CDS BCAM0003 NC_011001.1 2538 3200 D putative partition protein ParA 2538..3200 Burkholderia cenocepacia J2315 6927819 YP_002232636.1 CDS BCAM0004 NC_011001.1 3224 4285 D Similar to Ralstonia solanacearum putative partitioning protein parB SWALL:Q8XTV0 (EMBL:AL646076) (334 aa) fasta scores: E(): 4.7e-19, 28.71% id in 310 aa; homology does not extend to the N terminus; putative partitioning protein ParB 3224..4285 Burkholderia cenocepacia J2315 6927820 YP_002232637.1 CDS BCAM0005 NC_011001.1 4378 5745 R putative replication protein complement(4378..5745) Burkholderia cenocepacia J2315 6927821 YP_002232638.1 CDS BCAM0005A NC_011001.1 6784 6996 R no significant database hits; hypothetical protein complement(6784..6996) Burkholderia cenocepacia J2315 6927822 YP_002232639.1 CDS BCAM0006 NC_011001.1 7550 8731 D Contains coiled-coiled domains, residues 112 to 296; hypothetical protein 7550..8731 Burkholderia cenocepacia J2315 6927823 YP_002232640.1 CDS BCAM0007 NC_011001.1 8868 9887 R putative phage integrase complement(8868..9887) Burkholderia cenocepacia J2315 6927824 YP_002232641.1 CDS BCAM0008 NC_011001.1 9990 10367 R hypothetical protein complement(9990..10367) Burkholderia cenocepacia J2315 6927825 YP_002232642.1 CDS BCAM0009 NC_011001.1 10509 11120 R putative DNA-binding protein complement(10509..11120) Burkholderia cenocepacia J2315 6927826 YP_002232643.1 CDS kbl NC_011001.1 11279 12478 D catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 11279..12478 Burkholderia cenocepacia J2315 6927827 YP_002232644.1 CDS tdh NC_011001.1 12492 13520 D converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 12492..13520 Burkholderia cenocepacia J2315 6930518 YP_002232645.1 CDS BCAM0012 NC_011001.1 13918 14322 R no significant database hits; hypothetical protein complement(13918..14322) Burkholderia cenocepacia J2315 6930648 YP_002232646.1 CDS BCAM0013 NC_011001.1 14331 14969 R Poor database matches. C-terminal region is similar to Chromobacterium violaceum hypothetical protein SWALL:Q7NWH5 (EMBL:AE016917) (161 aa) fasta scores: E(): 8.3e-13, 35.06% id in 154 aa; putative acetyltransferase complement(14331..14969) Burkholderia cenocepacia J2315 6927828 YP_002232647.1 CDS BCAM0014 NC_011001.1 15152 15757 D TetR family regulatory protein 15152..15757 Burkholderia cenocepacia J2315 6927829 YP_002232648.1 CDS BCAM0015 NC_011001.1 15822 16301 D hypothetical protein 15822..16301 Burkholderia cenocepacia J2315 6927830 YP_002232649.1 CDS BCAM0016 NC_011001.1 16765 17850 R tartrate dehydrogenase complement(16765..17850) Burkholderia cenocepacia J2315 6927831 YP_002232650.1 CDS BCAM0017 NC_011001.1 17966 18889 D LysR family regulatory protein 17966..18889 Burkholderia cenocepacia J2315 6927832 YP_002232651.1 CDS argC NC_011001.1 18955 19896 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase complement(18955..19896) Burkholderia cenocepacia J2315 6927833 YP_002232652.1 CDS BCAM0019 NC_011001.1 20018 20902 D LysR family regulatory protein 20018..20902 Burkholderia cenocepacia J2315 6930349 YP_002232653.1 CDS BCAM0020 NC_011001.1 20953 21471 R hypothetical protein complement(20953..21471) Burkholderia cenocepacia J2315 6927834 YP_002232654.1 CDS BCAM0021 NC_011001.1 21478 22662 R putative patatin-like phospholipase complement(21478..22662) Burkholderia cenocepacia J2315 6927835 YP_002232655.1 CDS BCAM0022 NC_011001.1 22692 23477 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(22692..23477) Burkholderia cenocepacia J2315 6927836 YP_002232656.1 CDS adc NC_011001.1 23530 24270 R converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase complement(23530..24270) Burkholderia cenocepacia J2315 6927837 YP_002232657.1 CDS BCAM0024 NC_011001.1 24705 25286 D putative undecaprenyl-diphosphatase 24705..25286 Burkholderia cenocepacia J2315 6930330 YP_002232658.1 CDS BCAM0025 NC_011001.1 25311 25544 R no significant database hits; hypothetical protein complement(25311..25544) Burkholderia cenocepacia J2315 6927838 YP_002232659.1 CDS BCAM0026 NC_011001.1 25696 26517 R putative siderophore-interacting protein complement(25696..26517) Burkholderia cenocepacia J2315 6927839 YP_002232660.1 CDS BCAM0027 NC_011001.1 26556 27263 R Similar to Rhodopseudomonas palustris transcriptional regulator, padr family SWALL:Q6NB15 (EMBL:BX572596) (196 aa) fasta scores: E(): 1.3e-16, 42.07% id in 183 aa; homology does not extend to the N terminus; PadR family regulatory protein complement(26556..27263) Burkholderia cenocepacia J2315 6927840 YP_002232661.1 CDS BCAM0028 NC_011001.1 28013 29074 D no significant database matches; putative FHA-domain-containing protein 28013..29074 Burkholderia cenocepacia J2315 6927841 YP_002232662.1 CDS BCAM0029 NC_011001.1 29092 33123 D no significant database matches; putative protein kinase 29092..33123 Burkholderia cenocepacia J2315 6927842 YP_002232663.1 CDS BCAM0030 NC_011001.1 33157 33501 D hypothetical protein 33157..33501 Burkholderia cenocepacia J2315 6927843 YP_002232664.1 CDS BCAM0031 NC_011001.1 33518 33880 D hypothetical protein 33518..33880 Burkholderia cenocepacia J2315 6927844 YP_002232665.1 CDS BCAM0032 NC_011001.1 33974 36214 D Similar to Streptomyces galilaeus AknN SWALL:Q9L4V1 (EMBL:AF264025) (662 aa) fasta scores: E(): 1.3e-37, 35.36% id in 673 aa; homology does not extend to termini; hypothetical protein 33974..36214 Burkholderia cenocepacia J2315 6927845 YP_002232666.1 CDS BCAM0033 NC_011001.1 36282 37373 R putative outer membrane protein complement(36282..37373) Burkholderia cenocepacia J2315 6927846 YP_002232667.1 CDS BCAM0034 NC_011001.1 37551 38273 R putative short-chain dehydrogenase complement(37551..38273) Burkholderia cenocepacia J2315 6927847 YP_002232668.1 CDS BCAM0035 NC_011001.1 38251 39372 R putative zinc-binding dehydrogenase complement(38251..39372) Burkholderia cenocepacia J2315 6927848 YP_002232669.1 CDS BCAM0036 NC_011001.1 39374 40678 R major facilitator superfamily protein complement(39374..40678) Burkholderia cenocepacia J2315 6927849 YP_002232670.1 CDS dad NC_011001.1 40697 41230 R 2,4'-dihydroxyacetophenone dioxygenase complement(40697..41230) Burkholderia cenocepacia J2315 6927850 YP_002232671.1 CDS BCAM0038 NC_011001.1 41410 42390 D AraC family regulatory protein 41410..42390 Burkholderia cenocepacia J2315 6930435 YP_002232672.1 CDS BCAM0039 NC_011001.1 42486 44051 R Similar to Pseudomonas oleovorans alcohol dehydrogenase [acceptor] alkJ SWALL:ALKJ_PSEOL (SWALL:Q00593) (558 aa) fasta scores: E(): 1.4e-76, 41.69% id in 530 aa; contains C terminal 30 amino acid truncation; putative alcohol dehydrogenase complement(42486..44051) Burkholderia cenocepacia J2315 6927851 YP_002232673.1 CDS BCAM0040 NC_011001.1 44210 45178 R AraC family regulatory protein complement(44210..45178) Burkholderia cenocepacia J2315 6927852 YP_002232674.1 CDS BCAM0041 NC_011001.1 45382 46185 R Similar to Erwinia carotovora hypothetical protein SWALL:Q6D2K7 (EMBL:BX950851) (253 aa) fasta scores: E(): 2.1e-21, 37.61% id in 218 aa; putative lipoprotein complement(45382..46185) Burkholderia cenocepacia J2315 6927853 YP_002232675.1 CDS BCAM0042 NC_011001.1 46349 47296 R putative aldo/keto reductase complement(46349..47296) Burkholderia cenocepacia J2315 6927854 YP_002232676.1 CDS BCAM0043 NC_011001.1 47652 50156 D Similar to Ralstonia solanacearum putative vgr-related protein rs03020 SWALL:Q8XTK5 (EMBL:AL646076) (885 aa) fasta scores: E(): 6.7e-86, 51.59% id in 814 aa; homology does not extend to C terminus; hypothetical protein 47652..50156 Burkholderia cenocepacia J2315 6927855 YP_002232677.1 CDS BCAM0044 NC_011001.1 50170 51072 D hypothetical protein 50170..51072 Burkholderia cenocepacia J2315 6927856 YP_002232678.1 CDS BCAM0045 NC_011001.1 51129 51806 D no significant database matches; putative lipoprotein 51129..51806 Burkholderia cenocepacia J2315 6927857 YP_002232679.1 CDS BCAM0046 NC_011001.1 51843 53576 D Weakly similar to Chromobacterium violaceum hypothetical protein SWALL:Q7P249 (EMBL:AE016910) (512 aa) fasta scores: E(): 2.5e-11, 30.85% id in 512 aa; hypothetical protein 51843..53576 Burkholderia cenocepacia J2315 6927858 YP_002232680.1 CDS BCAM0047 NC_011001.1 53657 54277 R putative transporter-LysE family complement(53657..54277) Burkholderia cenocepacia J2315 6927859 YP_002232681.1 CDS BCAM0048 NC_011001.1 54388 55281 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 54388..55281 Burkholderia cenocepacia J2315 6927860 YP_002232682.1 CDS BCAM0049 NC_011001.1 55330 56076 R Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri fumarate and nitrate reduction regulatory protein fnR SWALL:FNR_ECOLI (SWALL:P03019) (250 aa) fasta scores: E(): 4.2e-35, 42.92% id in 226 aa; homology does not extend to N terminus; CRP family regulatory protein complement(55330..56076) Burkholderia cenocepacia J2315 6927861 YP_002232683.1 CDS BCAM0050 NC_011001.1 56180 56647 R universal stress-related protein complement(56180..56647) Burkholderia cenocepacia J2315 6927862 YP_002232684.1 CDS BCAM0050a NC_011001.1 57156 57563 R hypothetical protein complement(57156..57563) Burkholderia cenocepacia J2315 6927863 YP_002232685.1 CDS BCAM0052 NC_011001.1 57842 58075 D hypothetical protein 57842..58075 Burkholderia cenocepacia J2315 6927864 YP_002232686.1 CDS srpH NC_011001.1 58213 59133 D serine acetyltransferase 58213..59133 Burkholderia cenocepacia J2315 6927865 YP_002232687.1 CDS BCAM0054 NC_011001.1 59296 60099 R putative short-chain dehydrogenase complement(59296..60099) Burkholderia cenocepacia J2315 6930646 YP_002232688.1 CDS folE NC_011001.1 60099 60734 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(60099..60734) Burkholderia cenocepacia J2315 6927866 YP_002232689.1 CDS BCAM0056 NC_011001.1 60830 61756 R LysR family regulatory protein complement(60830..61756) Burkholderia cenocepacia J2315 6930462 YP_002232690.1 CDS pobA NC_011001.1 61873 63105 D catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 61873..63105 Burkholderia cenocepacia J2315 6927867 YP_002232691.1 CDS pcaI NC_011001.1 63250 63966 D 3-oxoadipate CoA-transferase subunit A 63250..63966 Burkholderia cenocepacia J2315 6930604 YP_002232692.1 CDS pcaJ NC_011001.1 63986 64642 D 3-oxoadipate CoA-transferase subunit B 63986..64642 Burkholderia cenocepacia J2315 6930584 YP_002232693.1 CDS pcaB NC_011001.1 64731 66089 D Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase 64731..66089 Burkholderia cenocepacia J2315 6930585 YP_002232694.1 CDS BCAM0061 NC_011001.1 66106 66891 D family S33 serine peptidase; putative 3-oxoadipate enol-lactonase I 66106..66891 Burkholderia cenocepacia J2315 6930580 YP_002232695.1 CDS pcaC NC_011001.1 66902 67288 D 4-carboxymuconolactone decarboxylase 66902..67288 Burkholderia cenocepacia J2315 6927868 YP_002232696.1 CDS BCAM0063 NC_011001.1 67483 68841 D putative 4-hydroxybenzoate transporter 67483..68841 Burkholderia cenocepacia J2315 6930581 YP_002232697.1 CDS BCAM0064 NC_011001.1 68974 69222 R hypothetical protein complement(68974..69222) Burkholderia cenocepacia J2315 6927869 YP_002232698.1 CDS BCAM0065 NC_011001.1 69331 69948 R putative transporter-LysE family complement(69331..69948) Burkholderia cenocepacia J2315 6927870 YP_002232699.1 CDS BCAM0066 NC_011001.1 71131 73110 D Similar to Streptomyces avermitilis hypothetical protein SWALL:Q82B80 (EMBL:BA000030) (654 aa) fasta scores: E(): 3.7e-59, 35.8% id in 648 aa; homology does not extend to far C terminus; putative lipoprotein 71131..73110 Burkholderia cenocepacia J2315 6927872 YP_002232700.1 CDS BCAM0067 NC_011001.1 73112 73825 D putative short chain dehydrogenase 73112..73825 Burkholderia cenocepacia J2315 6927873 YP_002232701.1 CDS BCAM0068 NC_011001.1 73803 75209 D major facilitator superfamily protein 73803..75209 Burkholderia cenocepacia J2315 6927874 YP_002232702.1 CDS BCAM0069 NC_011001.1 75236 76918 D Similar to Streptomyces parvulus hypothetical protein BorL SWALL:Q70HZ3 (EMBL:AJ580915) (556 aa) fasta scores: E(): 1.8e-57, 35.79% id in 528 aa; homology does not extend to N terminus; hypothetical protein 75236..76918 Burkholderia cenocepacia J2315 6927875 YP_002232703.1 CDS BCAM0070 NC_011001.1 76940 77818 D Similar to Streptomyces parvulus hypothetical protein BorF borF SWALL:Q70I05 (EMBL:AJ580915) (272 aa) fasta scores: E(): 8.7e-27, 35.79% id in 257 aa; homology does not extend to the N terminus; putative hydrolase 76940..77818 Burkholderia cenocepacia J2315 6927876 YP_002232704.1 CDS BCAM0071 NC_011001.1 77811 78989 D putative mandelate racemase/muconate lactonizing enzyme 77811..78989 Burkholderia cenocepacia J2315 6927877 YP_002232705.1 CDS BCAM0072 NC_011001.1 78956 80734 D no significant database matches; putative thiamine pyrophosphate enzyme 78956..80734 Burkholderia cenocepacia J2315 6927878 YP_002232706.1 CDS BCAM0073 NC_011001.1 80783 81664 D Central 170 amino acids similar to Caulobacter crescentus hypothetical protein cc1419 SWALL:Q9A8D5 (EMBL:AE005816) (336 aa) fasta scores: E(): 2.3e-15, 35.59% id in 177 aa; hypothetical protein 80783..81664 Burkholderia cenocepacia J2315 6927879 YP_002232707.1 CDS BCAM0074 NC_011001.1 81873 83000 D hypothetical protein 81873..83000 Burkholderia cenocepacia J2315 6927880 YP_002232708.1 CDS BCAM0075 NC_011001.1 83007 83588 R TetR family regulatory protein complement(83007..83588) Burkholderia cenocepacia J2315 6927881 YP_002232709.1 CDS BCAM0076 NC_011001.1 84022 84789 R TetR family regulatory protein complement(84022..84789) Burkholderia cenocepacia J2315 6927882 YP_002232710.1 CDS BCAM0077 NC_011001.1 84902 86614 D Similar to Escherichia coli 3- mhpA SWALL:MHPA_ECOLI (SWALL:P77397) (554 aa) fasta scores: E(): 3.7e-45, 32.94% id in 510 aa; homology does not extend to far N and C termini; putative flavoprotein monooxygenase 84902..86614 Burkholderia cenocepacia J2315 6927883 YP_002232711.1 CDS BCAM0078 NC_011001.1 86622 87692 D Similar to Burkholderia cepacia trihydroxytoluene oxygenase dntD SWALL:O87474 (EMBL:AF076848) (315 aa) fasta scores: E(): 5.8e-37, 39.33% id in 300 aa; contains extensions at the N and C termini; putative dioxygenase 86622..87692 Burkholderia cenocepacia J2315 6927884 YP_002232712.1 CDS BCAM0079 NC_011001.1 87729 88685 D putative fumarylacetoacetate hydrolase family protein 87729..88685 Burkholderia cenocepacia J2315 6927885 YP_002232713.1 CDS BCAM0080 NC_011001.1 88682 90643 D AMP-binding domain-containing protein 88682..90643 Burkholderia cenocepacia J2315 6927886 YP_002232714.1 CDS BCAM0081 NC_011001.1 90857 91582 D putative outer membrane protein-OmpW family 90857..91582 Burkholderia cenocepacia J2315 6927887 YP_002232715.1 CDS BCAM0082 NC_011001.1 91858 92592 R putative polysaccharide deacetylase complement(91858..92592) Burkholderia cenocepacia J2315 6927888 YP_002232716.1 CDS BCAM0083 NC_011001.1 92616 93182 R hypothetical protein complement(92616..93182) Burkholderia cenocepacia J2315 6927889 YP_002232717.1 CDS BCAM0084 NC_011001.1 93173 94327 R putative glycosyl transferase complement(93173..94327) Burkholderia cenocepacia J2315 6927890 YP_002232718.1 CDS BCAM0085 NC_011001.1 94684 95280 D TetR family regulatory protein 94684..95280 Burkholderia cenocepacia J2315 6927891 YP_002232719.1 CDS BCAM0086 NC_011001.1 95627 96925 D putative sodium:dicarboxylate symporter family protein 95627..96925 Burkholderia cenocepacia J2315 6927892 YP_002232720.1 CDS BCAM0087 NC_011001.1 97379 99313 D putative lipoprotein 97379..99313 Burkholderia cenocepacia J2315 6927893 YP_002232721.1 CDS BCAM0088 NC_011001.1 99606 100424 D putative peptidyl-prolyl cis-trans isomerase 99606..100424 Burkholderia cenocepacia J2315 6927894 YP_002232722.1 CDS BCAM0089 NC_011001.1 100455 100892 R putative acetyltransferase complement(100455..100892) Burkholderia cenocepacia J2315 6927895 YP_002232723.1 CDS BCAM0090 NC_011001.1 100935 101738 R no significant database matches; hypothetical protein complement(100935..101738) Burkholderia cenocepacia J2315 6927896 YP_002232724.1 CDS BCAM0091 NC_011001.1 102192 103484 D hypothetical protein 102192..103484 Burkholderia cenocepacia J2315 6927897 YP_002232725.1 CDS BCAM0092 NC_011001.1 103498 104313 D hypothetical protein 103498..104313 Burkholderia cenocepacia J2315 6927898 YP_002232726.1 CDS BCAM0093 NC_011001.1 104321 105343 R Poor database matches to the full length CDS. N-terminal region is similar to Rhizobium meliloti heavy metal dependent transcription regulator 2 HmrR2 SWALL:HMR2_RHIME (SWALL:P58379) (147 aa) fasta scores: E(): 0.033, 31.34% id in 134 aa; MerR family regulatory protein complement(104321..105343) Burkholderia cenocepacia J2315 6927899 YP_002232727.1 CDS xylB NC_011001.1 105426 106892 R xylulose kinase complement(105426..106892) Burkholderia cenocepacia J2315 6927900 YP_002232728.1 CDS BCAM0095 NC_011001.1 106889 107824 R AraC family regulatory protein complement(106889..107824) Burkholderia cenocepacia J2315 6930666 YP_002232729.1 CDS BCAM0096 NC_011001.1 107854 109047 R Similar to Escherichia coli sn-glycerol-3-phosphate transport ATP-binding protein UgpC ugpC SWALL:UGPC_ECOLI (SWALL:P10907) (356 aa) fasta scores: E(): 1.8e-56, 48.35% id in 364 aa; contains 30 amino acid C terminal extension; ABC transporter ATP-binding protein complement(107854..109047) Burkholderia cenocepacia J2315 6927901 YP_002232730.1 CDS BCAM0097 NC_011001.1 109051 110085 R D-xylulose reductase complement(109051..110085) Burkholderia cenocepacia J2315 6927902 YP_002232731.1 CDS BCAM0098 NC_011001.1 110096 110911 R putative ABC transporter system permease complement(110096..110911) Burkholderia cenocepacia J2315 6927903 YP_002232732.1 CDS BCAM0099 NC_011001.1 110911 111870 R Similar to Rhizobium loti sugar ABC transporter permease protein SWALL:Q98D12 (EMBL:BA000012) (290 aa) fasta scores: E(): 6.6e-68, 63.38% id in 284 aa; contains 27 amino acid N terminal extension; putative ABC transporter system permease complement(110911..111870) Burkholderia cenocepacia J2315 6927904 YP_002232733.1 CDS BCAM0100 NC_011001.1 111854 113119 R putative periplasmic solute-binding protein complement(111854..113119) Burkholderia cenocepacia J2315 6927905 YP_002232734.1 CDS BCAM0101 NC_011001.1 113331 114290 R putative amidohydrolase complement(113331..114290) Burkholderia cenocepacia J2315 6927906 YP_002232735.1 CDS BCAM0102 NC_011001.1 114292 115239 R hypothetical protein complement(114292..115239) Burkholderia cenocepacia J2315 6927907 YP_002232736.1 CDS BCAM0103 NC_011001.1 115280 116572 R major facilitator superfamily protein complement(115280..116572) Burkholderia cenocepacia J2315 6927908 YP_002232737.1 CDS BCAM0104 NC_011001.1 116670 117587 R putative dihydrodipicolinate synthase complement(116670..117587) Burkholderia cenocepacia J2315 6927909 YP_002232738.1 CDS BCAM0105 NC_011001.1 117596 118768 R putative mandelate racemase/muconate lactonizing enzyme complement(117596..118768) Burkholderia cenocepacia J2315 6927910 YP_002232739.1 CDS pdxA NC_011001.1 118818 119873 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(118818..119873) Burkholderia cenocepacia J2315 6927911 YP_002232740.1 CDS BCAM0107 NC_011001.1 119989 120936 D LysR family regulatory protein 119989..120936 Burkholderia cenocepacia J2315 6927912 YP_002232741.1 CDS BCAM0108 NC_011001.1 121180 122451 R major facilitator superfamily protein complement(121180..122451) Burkholderia cenocepacia J2315 6927913 YP_002232742.1 CDS BCAM0109 NC_011001.1 122633 123319 D hypothetical protein 122633..123319 Burkholderia cenocepacia J2315 6927914 YP_002232743.1 CDS BCAM0110 NC_011001.1 123339 124424 R two-component regulatory system sensor kinase complement(123339..124424) Burkholderia cenocepacia J2315 6927915 YP_002232744.1 CDS BCAM0111 NC_011001.1 124421 125158 R two-component regulatory system response regulator protein complement(124421..125158) Burkholderia cenocepacia J2315 6927916 YP_002232745.1 CDS BCAM0112 NC_011001.1 125740 127071 D Similar to the N-terminal region of Bos taurus amine oxidase [flavin-containing] A MAOA SWALL:AOFA_BOVIN (SWALL:P21398) (527 aa) fasta scores: E(): 1.4e-26, 31.33% id in 466 aa; amine oxidase 125740..127071 Burkholderia cenocepacia J2315 6927917 YP_002232746.1 CDS BCAM0113 NC_011001.1 127064 127741 D C-terminal region is similar to Chromatium vinosum cytochrome subunit of sulfide dehydrogenase precursor FccA SWALL:CYSD_CHRVI (SWALL:Q06529) (199 aa) fasta scores: E(): 7.1e-06, 26.4% id in 178 aa; putative cytochrome c precursor 127064..127741 Burkholderia cenocepacia J2315 6927918 YP_002232747.1 CDS BCAM0114 NC_011001.1 127777 128451 D hypothetical protein 127777..128451 Burkholderia cenocepacia J2315 6927919 YP_002232748.1 CDS BCAM0115 NC_011001.1 128525 129127 D TetR family regulatory protein 128525..129127 Burkholderia cenocepacia J2315 6927920 YP_002232749.1 CDS BCAM0116 NC_011001.1 129372 130205 D putative phytanoyl-CoA dioxygenase 129372..130205 Burkholderia cenocepacia J2315 6927921 YP_002232750.1 CDS BCAM0117 NC_011001.1 130222 130635 D putative endoribonuclease 130222..130635 Burkholderia cenocepacia J2315 6927922 YP_002232751.1 CDS BCAM0118 NC_011001.1 130845 132209 D putative lipoprotein 130845..132209 Burkholderia cenocepacia J2315 6927923 YP_002232752.1 CDS BCAM0119 NC_011001.1 132288 134132 D hypothetical protein 132288..134132 Burkholderia cenocepacia J2315 6927924 YP_002232753.1 CDS BCAM0120 NC_011001.1 134201 136561 D hypothetical protein 134201..136561 Burkholderia cenocepacia J2315 6927925 YP_002232754.1 CDS BCAM0121 NC_011001.1 136593 136877 D putative lipoprotein 136593..136877 Burkholderia cenocepacia J2315 6927926 YP_002232755.1 CDS BCAM0122 NC_011001.1 136908 137876 D BNR/Asp-box repeat protein 136908..137876 Burkholderia cenocepacia J2315 6927927 YP_002232756.1 CDS BCAM0123 NC_011001.1 137944 139398 D C-terminus is similar to the N-terminal region of Homo sapiens amine oxidase [flavin-containing] B MAOB SWALL:AOFB_HUMAN (SWALL:P27338) (519 aa) fasta scores: E(): 4.1e-32, 33.54% id in 462 aa; putative amine oxidase 137944..139398 Burkholderia cenocepacia J2315 6927928 YP_002232757.1 CDS BCAM0124 NC_011001.1 139399 140070 D putative cytochrome c precursor 139399..140070 Burkholderia cenocepacia J2315 6927929 YP_002232758.1 CDS BCAM0125 NC_011001.1 140244 141374 D saccharopine dehydrogenase family protein 140244..141374 Burkholderia cenocepacia J2315 6927930 YP_002232759.1 CDS BCAM0126 NC_011001.1 141417 142970 D putative AMP-binding protein 141417..142970 Burkholderia cenocepacia J2315 6927931 YP_002232760.1 CDS BCAM0127 NC_011001.1 142996 144237 D Similar to the N-terminal region of Rattus norvegicus nonspecific lipid-transfer protein, mitochondrial precursor SCP2 SWALL:NLTP_RAT (SWALL:P11915) (547 aa) fasta scores: E(): 4.8e-30, 36.54% id in 405 aa; putative thiolase 142996..144237 Burkholderia cenocepacia J2315 6927932 YP_002232761.1 CDS BCAM0128 NC_011001.1 144345 145733 D putative FAD dependent oxidoreductase 144345..145733 Burkholderia cenocepacia J2315 6927933 YP_002232762.1 CDS BCAM0129 NC_011001.1 145907 146578 D Poor database matches; TetR family regulatory protein 145907..146578 Burkholderia cenocepacia J2315 6927934 YP_002232763.1 CDS BCAM0130 NC_011001.1 146750 148039 D putative acyl-CoA dehydrogenase 146750..148039 Burkholderia cenocepacia J2315 6927935 YP_002232764.1 CDS hchA NC_011001.1 148102 148983 R Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; chaperone protein HchA complement(148102..148983) Burkholderia cenocepacia J2315 6927936 YP_002232765.1 CDS BCAM0132 NC_011001.1 149338 151005 D putative AMP-binding protein 149338..151005 Burkholderia cenocepacia J2315 6930491 YP_002232766.1 CDS BCAM0133 NC_011001.1 151296 154061 D LuxR superfamily regulatory protein 151296..154061 Burkholderia cenocepacia J2315 6927937 YP_002232767.1 CDS BCAM0134 NC_011001.1 154087 154959 R LysR family regulatory protein complement(154087..154959) Burkholderia cenocepacia J2315 6927938 YP_002232768.1 CDS BCAM0135 NC_011001.1 155154 156191 D putative quinone oxidoreductase 155154..156191 Burkholderia cenocepacia J2315 6927939 YP_002232769.1 CDS BCAM0136 NC_011001.1 156329 157312 D LysR family regulatory protein 156329..157312 Burkholderia cenocepacia J2315 6927940 YP_002232770.1 CDS BCAM0137 NC_011001.1 157361 157738 D Similar to the N-terminal region Escherichia coli, and Escherichia coli O6 osmotically inducible protein Y precursor osmY SWALL:OSMY_ECOLI (SWALL:P27291) (201 aa) fasta scores: E(): 0.71, 28.57% id in 119 aa, and to the full length Xanthomonas campestris hypothetical protein XCC3437 SWALL:Q8P5A4 (EMBL:AE012463) (120 aa) fasta scores: E(): 5.5, 30.68% id in 88 aa; putative phospholipid-binding exported protein 157361..157738 Burkholderia cenocepacia J2315 6927941 YP_002232771.1 CDS BCAM0138 NC_011001.1 158225 158899 D phosphoglycerate mutase family protein 158225..158899 Burkholderia cenocepacia J2315 6927942 YP_002232772.1 CDS BCAM0139 NC_011001.1 158919 159950 D putative phosphotransferase family protein 158919..159950 Burkholderia cenocepacia J2315 6927943 YP_002232773.1 CDS BCAM0140 NC_011001.1 159982 160764 D short chain dehydrogenase 159982..160764 Burkholderia cenocepacia J2315 6927944 YP_002232774.1 CDS BCAM0141 NC_011001.1 160772 161530 D putative short-chain dehydrogenase 160772..161530 Burkholderia cenocepacia J2315 6927945 YP_002232775.1 CDS BCAM0142 NC_011001.1 161570 162814 D putative acyl-CoA dehydrogenase family protein 161570..162814 Burkholderia cenocepacia J2315 6927946 YP_002232776.1 CDS BCAM0143 NC_011001.1 162891 163796 D LysR family regulatory protein 162891..163796 Burkholderia cenocepacia J2315 6927947 YP_002232777.1 CDS BCAM0144 NC_011001.1 163813 164940 R DnaJ domain-containing protein complement(163813..164940) Burkholderia cenocepacia J2315 6927948 YP_002232778.1 CDS BCAM0145 NC_011001.1 165048 165374 R hypothetical protein complement(165048..165374) Burkholderia cenocepacia J2315 6927949 YP_002232779.1 CDS polA NC_011001.1 165890 168274 R Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II complement(165890..168274) Burkholderia cenocepacia J2315 6927950 YP_002232780.1 CDS BCAM0147 NC_011001.1 168376 169134 R hypothetical protein complement(168376..169134) Burkholderia cenocepacia J2315 6930605 YP_002232781.1 CDS BCAM0148 NC_011001.1 169626 172472 D hypothetical protein 169626..172472 Burkholderia cenocepacia J2315 6927951 YP_002232782.1 CDS BCAM0149 NC_011001.1 172476 174527 D Similar to Ralstonia solanacearum probable phospholipase protein rs03737 SWALL:Q8XS51 (EMBL:AL646079) (652 aa) fasta scores: E(): 3.5e-85, 50.36% id in 691 aa. C-terminus is weakly similar to the C-terminal region of Arabidopsis thaliana phospholipase D beta 1 PLDbeta1 SWALL:PDB1_ARATH (SWALL:P93733) (967 aa) fasta scores: E(): 0.06, 24.01% id in 483 aa; putative phospholipase D protein 172476..174527 Burkholderia cenocepacia J2315 6927952 YP_002232783.1 CDS BCAM0150 NC_011001.1 174531 175838 D putative lipoprotein 174531..175838 Burkholderia cenocepacia J2315 6927953 YP_002232784.1 CDS BCAM0152 NC_011001.1 176452 177762 D putative lipoprotein 176452..177762 Burkholderia cenocepacia J2315 6927956 YP_002232785.1 CDS kdgT NC_011001.1 178270 179289 R transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease complement(178270..179289) Burkholderia cenocepacia J2315 6927957 YP_002232786.1 CDS kduI NC_011001.1 179571 180407 D 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 179571..180407 Burkholderia cenocepacia J2315 6930520 YP_002232787.1 CDS kduD NC_011001.1 180412 181218 D CDS is extending at the N-terminus in comparison to orthologues; 2-deoxy-D-gluconate 3-dehydrogenase 180412..181218 Burkholderia cenocepacia J2315 6930522 YP_002232788.1 CDS kdgR NC_011001.1 181278 182174 D Lack of similarity at the N-terminus in comparison to other proteins; transcriptional regulator KdgR 181278..182174 Burkholderia cenocepacia J2315 6930521 YP_002232789.1 CDS BCAM0157 NC_011001.1 182234 182611 D hypothetical protein 182234..182611 Burkholderia cenocepacia J2315 6930519 YP_002232790.1 CDS BCAM0158 NC_011001.1 182630 184141 R putative diguanylate phosphodiesterase complement(182630..184141) Burkholderia cenocepacia J2315 6927958 YP_002232791.1 CDS BCAM0159 NC_011001.1 184660 184956 D hypothetical protein 184660..184956 Burkholderia cenocepacia J2315 6927959 YP_002232792.1 CDS BCAM0160 NC_011001.1 184977 185282 R hypothetical protein complement(184977..185282) Burkholderia cenocepacia J2315 6927960 YP_002232793.1 CDS BCAM0161 NC_011001.1 185369 186415 R AraC family regulatory protein complement(185369..186415) Burkholderia cenocepacia J2315 6927961 YP_002232794.1 CDS BCAM0162 NC_011001.1 186525 187442 D hypothetical protein 186525..187442 Burkholderia cenocepacia J2315 6927962 YP_002232795.1 CDS BCAM0163 NC_011001.1 187493 187867 R putative microcin immunity protein complement(187493..187867) Burkholderia cenocepacia J2315 6927963 YP_002232796.1 CDS BCAM0164 NC_011001.1 188051 189679 R putative lipoprotein complement(188051..189679) Burkholderia cenocepacia J2315 6927964 YP_002232797.1 CDS BCAM0165 NC_011001.1 189862 190296 R hypothetical protein complement(189862..190296) Burkholderia cenocepacia J2315 6927965 YP_002232798.1 CDS ndh NC_011001.1 190623 191981 R NADH dehydrogenase complement(190623..191981) Burkholderia cenocepacia J2315 6927966 YP_002232799.1 CDS BCAM0167 NC_011001.1 192082 193035 D LysR family regulatory protein 192082..193035 Burkholderia cenocepacia J2315 6930565 YP_002232800.1 CDS BCAM0168 NC_011001.1 193436 194359 D AraC family regulatory protein 193436..194359 Burkholderia cenocepacia J2315 6927967 YP_002232801.1 CDS BCAM0169 NC_011001.1 194494 195381 D NmrA-like family protein 194494..195381 Burkholderia cenocepacia J2315 6927968 YP_002232802.1 CDS benE NC_011001.1 195407 196609 R benzoate membrane transport protein complement(195407..196609) Burkholderia cenocepacia J2315 6927969 YP_002232803.1 CDS BCAM0171 NC_011001.1 196785 197810 R putative desaturase complement(196785..197810) Burkholderia cenocepacia J2315 6930394 YP_002232804.1 CDS BCAM0172 NC_011001.1 198053 198880 D hypothetical protein 198053..198880 Burkholderia cenocepacia J2315 6927970 YP_002232805.1 CDS dbpA NC_011001.1 198931 200328 R exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA complement(198931..200328) Burkholderia cenocepacia J2315 6927971 YP_002232806.1 CDS BCAM0174 NC_011001.1 200325 200522 R hypothetical protein complement(200325..200522) Burkholderia cenocepacia J2315 6930438 YP_002232807.1 CDS mqo NC_011001.1 200810 202453 R malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase complement(200810..202453) Burkholderia cenocepacia J2315 6927972 YP_002232808.1 CDS BCAM0175a NC_011001.1 202997 203302 R putative lipoprotein complement(202997..203302) Burkholderia cenocepacia J2315 6930557 YP_002232809.1 CDS BCAM0176 NC_011001.1 203373 203861 R AnsC family regulatory protein complement(203373..203861) Burkholderia cenocepacia J2315 6927973 YP_002232810.1 CDS aphA NC_011001.1 203990 205027 D acetylpolyamine aminohydrolase 203990..205027 Burkholderia cenocepacia J2315 6927974 YP_002232811.1 CDS BCAM0178 NC_011001.1 205096 206238 D putative periplasmic solute-binding protein 205096..206238 Burkholderia cenocepacia J2315 6930348 YP_002232812.1 CDS BCAM0179 NC_011001.1 206272 207141 R putative mechanosensitive ion channel protein complement(206272..207141) Burkholderia cenocepacia J2315 6927975 YP_002232813.1 CDS BCAM0180 NC_011001.1 207421 208794 D subfamily M23B metallo peptidase. Weakly similar to Rhizobium loti MLR3423 protein SWALL:Q98GA2 (EMBL:AP003001) (476 aa) fasta scores: E(): 1.3e-18, 29.73% id in 454 aa. C-terminus is similar to the C-terminal region of Bordetella parapertussis hypothetical protein SWALL:Q7W3Z7 (EMBL:BX640435) (471 aa) fasta scores: E(): 9.1e-27, 39.39% id in 264 aa; subfamily M23B metallopeptidase 207421..208794 Burkholderia cenocepacia J2315 6927976 YP_002232814.1 CDS BCAM0181 NC_011001.1 209163 210236 D putative catalase 209163..210236 Burkholderia cenocepacia J2315 6927977 YP_002232815.1 CDS BCAM0182 NC_011001.1 210233 210799 D putative cytochrome b561 210233..210799 Burkholderia cenocepacia J2315 6927978 YP_002232816.1 CDS BCAM0183 NC_011001.1 211297 214632 D Similar to the C-terminal region of Bordetella parapertussis autotransporter SWALL:Q7WC79 (EMBL:BX640424) (1616 aa) fasta scores: E(): 7.3e-42, 33.64% id in 1165 aa; putative autotransporter protein 211297..214632 Burkholderia cenocepacia J2315 6927979 YP_002232817.1 CDS BCAM0184 NC_011001.1 214786 215520 R No significant database matches to the full length CDS. C-terminus is similar to Chromobacterium violaceum hypothetical protein SWALL:Q7NX84 (EMBL:AE016916) (114 aa) fasta scores: E(): 3.7e-18, 56.14% id in 114 aa, and to the C-terminal region of Photorhabdus luminescens hypothetical protein SWALL:Q937N3 (EMBL:AF346497) (320 aa) fasta scores: E(): 4.5e-08, 33.51% id in 182 aa; lectin complement(214786..215520) Burkholderia cenocepacia J2315 6927980 YP_002232818.1 CDS BCAM0185 NC_011001.1 215683 216501 R N-terminal region is similar to Photorhabdus luminescens hypothetical membrane protein SWALL:Q7MZP1 (EMBL:BX571873) (139 aa) fasta scores: E(): 2.3e-18, 56.06% id in 132 aa. C-terminal region is similar to Chromobacterium violaceum hypothetical protein SWALL:Q7NX84 (EMBL:AE016916) (114 aa) fasta scores: E(): 1.4e-15, 51.75% id in 114 aa. Full length CDS is similar to the C-terminal region of Photorhabdus luminescens photopexin B PpxB SWALL:Q7MZN8 (EMBL:BX571873) (340 aa) fasta scores: E(): 2e-06, 28.62% id in 276 aa; lectin complement(215683..216501) Burkholderia cenocepacia J2315 6927981 YP_002232819.1 CDS BCAM0186 NC_011001.1 216624 217013 R lectin complement(216624..217013) Burkholderia cenocepacia J2315 6927982 YP_002232820.1 CDS BCAM0187 NC_011001.1 217955 219667 D 2-isopropylmalate synthase 217955..219667 Burkholderia cenocepacia J2315 6927983 YP_002232821.1 CDS BCAM0188 NC_011001.1 219739 220452 R Similar to Ralstonia solanacearum transcriptional activator protein SolR or rsc3287 or rs02516 SWALL:SLR1_RALSO (SWALL:P58590) (236 aa) fasta scores: E(): 7.1e-29, 38.79% id in 232 aa, and to Burkholderia stabilis N-acyl homoserine lactone transcriptional regulator cepR SWALL:Q93PF6 (EMBL:AF333005) (239 aa) fasta scores: E(): 6e-26, 38.46% id in 234 aa; N-acylhomoserine lactone dependent regulatory protein complement(219739..220452) Burkholderia cenocepacia J2315 6927984 YP_002232822.1 CDS BCAM0189 NC_011001.1 220649 221464 D AraC family regulatory protein 220649..221464 Burkholderia cenocepacia J2315 6927985 YP_002232823.1 CDS BCAM0190 NC_011001.1 221495 222841 R hypothetical protein complement(221495..222841) Burkholderia cenocepacia J2315 6927986 YP_002232824.1 CDS BCAM0191 NC_011001.1 222898 224259 R putative non-ribosomal peptide synthetase complement(222898..224259) Burkholderia cenocepacia J2315 6927987 YP_002232825.1 CDS BCAM0192 NC_011001.1 224656 225438 D hypothetical protein 224656..225438 Burkholderia cenocepacia J2315 6927988 YP_002232826.1 CDS BCAM0193 NC_011001.1 225435 225824 D homology extends only to N terminus of protein; hypothetical protein 225435..225824 Burkholderia cenocepacia J2315 6927989 YP_002232827.1 CDS BCAM0194 NC_011001.1 225821 226747 D hypothetical protein 225821..226747 Burkholderia cenocepacia J2315 6927990 YP_002232828.1 CDS BCAM0195 NC_011001.1 226757 230323 D homology does not extend to N terminus; putative non-ribosomal peptide synthetase 226757..230323 Burkholderia cenocepacia J2315 6927991 YP_002232829.1 CDS BCAM0196 NC_011001.1 230379 230867 D hypothetical protein 230379..230867 Burkholderia cenocepacia J2315 6927992 YP_002232830.1 CDS BCAM0197 NC_011001.1 230896 231864 R LysR family regulatory protein complement(230896..231864) Burkholderia cenocepacia J2315 6927993 YP_002232831.1 CDS BCAM0198 NC_011001.1 232000 232773 R AraC family regulatory protein complement(232000..232773) Burkholderia cenocepacia J2315 6927994 YP_002232832.1 CDS BCAM0199 NC_011001.1 232941 234377 D outer membrane efflux protein 232941..234377 Burkholderia cenocepacia J2315 6927995 YP_002232833.1 CDS BCAM0200 NC_011001.1 234437 235561 D efflux system transport protein 234437..235561 Burkholderia cenocepacia J2315 6927996 YP_002232834.1 CDS BCAM0201 NC_011001.1 235558 237141 D major facilitator superfamily protein 235558..237141 Burkholderia cenocepacia J2315 6927997 YP_002232835.1 CDS BCAM0202 NC_011001.1 237309 238340 D hypothetical protein 237309..238340 Burkholderia cenocepacia J2315 6927998 YP_002232836.1 CDS BCAM0203 NC_011001.1 238348 239397 R hypothetical protein complement(238348..239397) Burkholderia cenocepacia J2315 6927999 YP_002232837.1 CDS BCAM0204 NC_011001.1 239387 240682 R putative polysaccharide biosynthesis transporter protein complement(239387..240682) Burkholderia cenocepacia J2315 6928000 YP_002232838.1 CDS BCAM0205 NC_011001.1 240679 241842 R hypothetical protein complement(240679..241842) Burkholderia cenocepacia J2315 6928001 YP_002232839.1 CDS BCAM0206 NC_011001.1 241842 243065 R Similar to Rhizobium meliloti (Sinorhizobium meliloti) putative glycosyltransferase. UniProt:Q92QS8 (414 aa) fasta scores: E()=1.1e-31, 35.092% id in 379 aa; homology does not extend to far N and C termini; glycosyltransferase complement(241842..243065) Burkholderia cenocepacia J2315 6928002 YP_002232840.1 CDS BCAM0207 NC_011001.1 243062 245335 R putative tyrosine-protein kinase complement(243062..245335) Burkholderia cenocepacia J2315 6928003 YP_002232841.1 CDS BCAM0208 NC_011001.1 245332 245838 R putative protein-tyrosine-phosphatase complement(245332..245838) Burkholderia cenocepacia J2315 6928004 YP_002232842.1 CDS BCAM0209 NC_011001.1 245838 246986 R Similar to Ralstonia solanacearum (Pseudomonas solanacearum) EPS I polysaccharide export outer membrane protein EpsA precursor UniProt:EPA2_RALSO (377 aa) fasta scores: E()=4.9e-43, 43.490% id in 361 aa; homology does not extend to N terminus; putative capsular polysaccharide transport protein complement(245838..246986) Burkholderia cenocepacia J2315 6928005 YP_002232843.1 CDS BCAM0210 NC_011001.1 247226 248617 R Similar to Escherichia coli WcaJ putative colanic biosynthesis UDP-glucose lipid carrier transferase UniProt:WCAJ_ECOLI (EMBL:ECD842) (464 aa) fasta scores: E()=2.8e-47, 39.348% id in 399 aa; homology does not extend to the N terminus; putative transferase complement(247226..248617) Burkholderia cenocepacia J2315 6928006 YP_002232844.1 CDS BCAM0211 NC_011001.1 248852 249754 R Similar to central region of Bacillus cereus (strain ATCC 14579/DSM 31) hypothetical protein. UniProt:Q81DW8 (384 aa) fasta scores: E()=2.9e-18, 30.403% id in 273 aa; hypothetical protein complement(248852..249754) Burkholderia cenocepacia J2315 6928007 YP_002232845.1 CDS BCAM0212 NC_011001.1 249782 251356 R Similar to Ralstonia solanacearum (Pseudomonas solanacearum) rs00434 hypothetical protein rsc3164. UniProt:Q8XUM3 (387 aa) fasta scores: E()=4.8e-19, 35.455% id in 330 aa; homology does not extend to N terminus; hypothetical protein complement(249782..251356) Burkholderia cenocepacia J2315 6928008 YP_002232846.1 CDS BCAM0213 NC_011001.1 251708 252022 D N terminus is similar to N terminus of Brucella melitensis chloride channel protein. UniProt:Q8YFS5 (555 aa) fasta scores: E()=4.9, 32.877% id in 73 aa; hypothetical protein 251708..252022 Burkholderia cenocepacia J2315 6928009 YP_002232847.1 CDS BCAM0214 NC_011001.1 252025 252825 D Similar to C terminus of Rhizobium loti (Mesorhizobium loti) mll0582 protein. UniProt:Q98MH1 (931 aa) fasta scores: E()=1.7e-15, 27.925% id in 265 aa; putative glycosyltransferase 252025..252825 Burkholderia cenocepacia J2315 6928010 YP_002232848.1 CDS RS04811 NC_011001.1 253360 254202 D putative peptidylprolyl isomerase 253360..254202 Burkholderia cenocepacia J2315 6928011 YP_002232849.1 CDS BCAM0216 NC_011001.1 254723 255043 R hypothetical protein complement(254723..255043) Burkholderia cenocepacia J2315 6930629 YP_002232850.1 CDS BCAM0217 NC_011001.1 255040 255381 R Similar to Yersinia pestis hypothetical protein UniProt:Q8CLT6 (74 aa) fasta scores: E()=1.1, 38.596% id in 57 aa; homology does not extend to N- and C-termini; hypothetical protein complement(255040..255381) Burkholderia cenocepacia J2315 6928012 YP_002232851.1 CDS BCAM0218 NC_011001.1 255662 258694 R C terminus is similar to C terminus of Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides) dors dmso/tmao-sensor kinase. UniProt:O30740 (815 aa) fasta scores: E()=1.9e-36, 33.663% id in 505 aa; hybrid two-component system kinase-response regulator protein complement(255662..258694) Burkholderia cenocepacia J2315 6928013 YP_002232852.1 CDS BCAM0219 NC_011001.1 259169 268030 D Contains many Hep_Hag repeats and haemagglutinin motifs; putative haemagglutinin-related autotransporter protein 259169..268030 Burkholderia cenocepacia J2315 6928014 YP_002232853.1 CDS BCAM0220 NC_011001.1 268132 268851 D Similar to Bordetella avium ompa outer membrane protein A precursor. UniProt:OMPA_BORAV (EMBL:A45275) (194 aa) fasta scores: E()=2.6e-08, 39.552% id in 134 aa; homology does not extend to the N terminus; putative outer membrane protein 268132..268851 Burkholderia cenocepacia J2315 6928015 YP_002232854.1 CDS BCAM0221 NC_011001.1 269146 269865 D two-component regulatory system response regulator protein 269146..269865 Burkholderia cenocepacia J2315 6928016 YP_002232855.1 CDS BCAM0222 NC_011001.1 269998 270690 R two-component regulatory system response regulator protein complement(269998..270690) Burkholderia cenocepacia J2315 6928017 YP_002232856.1 CDS BCAM0223 NC_011001.1 270927 275579 R Contains many Hep_Hag repeats and haemagglutinin motif; putative haemagglutinin-related autotransporter protein complement(270927..275579) Burkholderia cenocepacia J2315 6928018 YP_002232857.1 CDS BCAM0224 NC_011001.1 275952 278813 R contains many Hep_Hag repeats and haemagglutinin motifs; putative haemagglutinin-related autotransporter protein complement(275952..278813) Burkholderia cenocepacia J2315 6928019 YP_002232858.1 CDS BCAM0227 NC_011001.1 281630 284665 R C terminus similar to C terminus of Bordetella pertussis bvgs virulence sensor protein bvgs precursor. UniProt:BVGS_BORPE (EMBL:A40185) (1238 aa) fasta scores: E()=1.7e-42, 33.185% id in 672 aa; hybrid two-component system kinase-response regulator protein complement(281630..284665) Burkholderia cenocepacia J2315 6928022 YP_002232859.1 CDS BCAM0228 NC_011001.1 284809 285693 R Similar to Bordetella parapertussis probable two-component response regulator. UniProt:Q7W2G4 (244 aa) fasta scores: E()=9e-18, 29.911% id in 224 aa; contains 50 amino acid N terminal extension; two-component regulatory system response regulator protein complement(284809..285693) Burkholderia cenocepacia J2315 6928023 YP_002232860.1 CDS BCAM0229 NC_011001.1 285989 287419 D C terminus is similar to C terminus Chromobacterium violaceum probable two-component sensor, UniProt:Q7NVL8 (417 aa) fasta scores: E()=3.3e-20, 36.290% id in 248 aa; two-component regulatory system sensor kinase 285989..287419 Burkholderia cenocepacia J2315 6928024 YP_002232861.1 CDS BCAM0230A NC_011001.1 287416 288060 D two-component regulatory system response regulator protein 287416..288060 Burkholderia cenocepacia J2315 6928025 YP_002232862.1 CDS BCAM0231 NC_011001.1 288168 288884 D opacity family porin protein 288168..288884 Burkholderia cenocepacia J2315 6928026 YP_002232863.1 CDS BCAM0232 NC_011001.1 289221 290228 D C-terminus similar to Chlamydomonas reinhardtii cgcr-4 product (fragment). UniProt:Q39598 (265 aa) fasta scores: E()=0.00014, 35.616% id in 219 aa; hypothetical protein 289221..290228 Burkholderia cenocepacia J2315 6928027 YP_002232864.1 CDS BCAM0233 NC_011001.1 290334 290681 D ArsR family regulatory protein 290334..290681 Burkholderia cenocepacia J2315 6928028 YP_002232865.1 CDS BCAM0234 NC_011001.1 290704 291198 D putative arsenate reductase 290704..291198 Burkholderia cenocepacia J2315 6928029 YP_002232866.1 CDS BCAM0235 NC_011001.1 291263 292360 D putative sodium bile acid symporter family protein 291263..292360 Burkholderia cenocepacia J2315 6928030 YP_002232867.1 CDS BCAM0236 NC_011001.1 292357 293079 D putative NADPH-dependent FMN reductase 292357..293079 Burkholderia cenocepacia J2315 6928031 YP_002232868.1 CDS BCAM0237A NC_011001.1 293331 294002 D MarC family protein 293331..294002 Burkholderia cenocepacia J2315 6928032 YP_002232869.1 CDS BCAM0238 NC_011001.1 294118 295020 R Similar to Xanthomonas campestris (pv. campestris) Kch ion transporter. UniProt:Q8P5Q3 (290 aa) fasta scores: E()=6.9e-43, 47.547% id in 265 aa; homology does not extend to N terminus; putative ion transporter complement(294118..295020) Burkholderia cenocepacia J2315 6928033 YP_002232870.1 CDS BCAM0238A NC_011001.1 295309 295605 R H-NS histone family protein complement(295309..295605) Burkholderia cenocepacia J2315 6928034 YP_002232871.1 CDS BCAM0239 NC_011001.1 296017 296496 D Similar to C-terminus of Ralstonia solanacearum (Pseudomonas solanacearum) rs06006 hypothetical protein rsc1870. UniProt:Q8XY93 (413 aa) fasta scores: E()=5.1e-11, 41.447% id in 152 aa; hypothetical protein 296017..296496 Burkholderia cenocepacia J2315 6928035 YP_002232872.1 CDS cciI NC_011001.1 296654 297277 R Similar to Ralstonia solanacearum autoinducer synthesis protein SolI or rsc3286 or rs02515 SWALL:SLI1_RALSO (SWALL:P58584) (204 aa) fasta scores: E(): 1.1e-18, 40.21% id in 184 aa, and to Burkholderia cepacia AHL synthase CepI SWALL:Q9AM52 (EMBL:AF330017) (202 aa) fasta scores: E(): 1.3e-18, 39.22% id in 181 aa. Contributes to virulence of B. cenocepacia. The CciI autoinducer synthase produces C6-HSL and smaller amounts of C8-HSL; N-acylhomoserine lactone synthase complement(296654..297277) Burkholderia cenocepacia J2315 6928036 YP_002232873.1 CDS cciR NC_011001.1 297531 298319 R Similar to Pseudomonas aeruginosa regulatory protein RhlR or LasM or VsmR or pa3477 SWALL:RHLR_PSEAE (SWALL:P54292) (241 aa) fasta scores: E(): 2.6e-11, 29.83% id in 238 aa. C-terminus similar to the C-terminal region of Vibrio anguillarum transcriptional activator protein VanR SWALL:VANR_VIBAN (SWALL:P74946) (240 aa) fasta scores: E(): 6.1e-14, 30.31% id in 188 aa; N-acylhomoserine lactone dependent regulatory protein complement(297531..298319) Burkholderia cenocepacia J2315 6930414 YP_002232874.1 CDS BCAM0241 NC_011001.1 298612 299541 R putative 3-oxoacyl-[acyl-carrier-protein] synthase complement(298612..299541) Burkholderia cenocepacia J2315 6930415 YP_002232875.1 CDS BCAM0242 NC_011001.1 299535 300578 R hypothetical protein complement(299535..300578) Burkholderia cenocepacia J2315 6928037 YP_002232876.1 CDS BCAM0243 NC_011001.1 300575 301168 R hypothetical protein complement(300575..301168) Burkholderia cenocepacia J2315 6928038 YP_002232877.1 CDS BCAM0244 NC_011001.1 301165 302283 R putative acyl-CoA dehydrogenase complement(301165..302283) Burkholderia cenocepacia J2315 6928039 YP_002232878.1 CDS BCAM0246 NC_011001.1 303100 303495 D putative transposase 303100..303495 Burkholderia cenocepacia J2315 6928040 YP_002232879.1 CDS BCAM0247 NC_011001.1 303492 303839 D putative transposase 303492..303839 Burkholderia cenocepacia J2315 6928041 YP_002232880.1 CDS BCAM0248 NC_011001.1 303891 305462 D putative transposase 303891..305462 Burkholderia cenocepacia J2315 6928042 YP_002232881.1 CDS BCAM0251 NC_011001.1 306046 307635 R putative AMP-binding protein complement(306046..307635) Burkholderia cenocepacia J2315 6928043 YP_002232882.1 CDS BCAM0252 NC_011001.1 307702 308637 R putative 3-oxoacyl-[acyl-carrier-protein] synthase complement(307702..308637) Burkholderia cenocepacia J2315 6928044 YP_002232883.1 CDS BCAM0253 NC_011001.1 308634 309659 R putative 3-oxoacyl-[acyl-carrier-protein] synthase complement(308634..309659) Burkholderia cenocepacia J2315 6928045 YP_002232884.1 CDS BCAM0254 NC_011001.1 309643 309921 R putative acyl carrier protein complement(309643..309921) Burkholderia cenocepacia J2315 6928046 YP_002232885.1 CDS BCAM0255 NC_011001.1 309952 311208 R Similar to Geobacillus kaustophilus acyl-CoA dehydrogenase. UniProt:Q5KW71_GEOKA (EMBL:BA000043) (404 aa) fasta scores: E()=1.5e-40, 39.578% id in 379 aa; homology does not extend to far N and C termini; putative acyl-CoA dehydrogenase complement(309952..311208) Burkholderia cenocepacia J2315 6928047 YP_002232886.1 CDS esmR NC_011001.1 311448 312281 D epidemic strain marker regulator 311448..312281 Burkholderia cenocepacia J2315 6928048 YP_002232887.1 CDS BCAM0257 NC_011001.1 312675 312956 R Similar to Bacillus licheniformis (strain DSM 13/ATCC 14580) hypothetical protein. UniProt:Q65M07_BACLD (EMBL:AE017333) (65 aa) fasta scores: E()=0.058, 40.351% id in 57 aa, and to N terminus of Bacteriophage phi-105 immunity repressor protein. UniProt:RPC_BPPH1 (EMBL:A93579) (144 aa) fasta scores: E()=0.11, 31.250% id in 80 aa; putative transcriptional regulator complement(312675..312956) Burkholderia cenocepacia J2315 6930445 YP_002232888.1 CDS BCAM0258 NC_011001.1 312973 313272 R repressor protein complement(312973..313272) Burkholderia cenocepacia J2315 6928049 YP_002232889.1 CDS BCAM0259 NC_011001.1 313367 313702 R putative repressor protein complement(313367..313702) Burkholderia cenocepacia J2315 6928050 YP_002232890.1 CDS BCAM0260 NC_011001.1 313884 314672 D putative amino acid transporter 313884..314672 Burkholderia cenocepacia J2315 6928051 YP_002232891.1 CDS BCAM0261 NC_011001.1 314763 315836 D putative branched-chain amino acid transporter 314763..315836 Burkholderia cenocepacia J2315 6928052 YP_002232892.1 CDS BCAM0262 NC_011001.1 315836 316570 D ABC transporter ATP-binding protein 315836..316570 Burkholderia cenocepacia J2315 6928053 YP_002232893.1 CDS BCAM0263 NC_011001.1 316557 317312 D ABC transporter ATP-binding protein 316557..317312 Burkholderia cenocepacia J2315 6928054 YP_002232894.1 CDS BCAM0264 NC_011001.1 317309 318487 D no significant database matches; hypothetical protein 317309..318487 Burkholderia cenocepacia J2315 6928055 YP_002232895.1 CDS amiI NC_011001.1 318540 319955 D putative amidase 318540..319955 Burkholderia cenocepacia J2315 6928056 YP_002232896.1 CDS BCAM0266 NC_011001.1 319952 320497 D hypothetical protein 319952..320497 Burkholderia cenocepacia J2315 6930344 YP_002232897.1 CDS opcI NC_011001.1 320550 321584 D Contributes to virulence of B. cenocepacia; putative porin 320550..321584 Burkholderia cenocepacia J2315 6928057 YP_002232898.1 CDS BCAM0268 NC_011001.1 321591 321815 D hypothetical protein 321591..321815 Burkholderia cenocepacia J2315 6930569 YP_002232899.1 CDS BCAM0270 NC_011001.1 322124 323473 R hypothetical protein complement(322124..323473) Burkholderia cenocepacia J2315 6928058 YP_002232900.1 CDS BCAM0271 NC_011001.1 323992 324261 D hypothetical protein 323992..324261 Burkholderia cenocepacia J2315 6928059 YP_002232901.1 CDS BCAM0272 NC_011001.1 324258 324746 D putative acetyltransferase 324258..324746 Burkholderia cenocepacia J2315 6928060 YP_002232902.1 CDS BCAM0275 NC_011001.1 326635 327486 D hypothetical protein 326635..327486 Burkholderia cenocepacia J2315 6928063 YP_002232903.1 CDS BCAM0275a NC_011001.1 328358 328813 D hypothetical protein 328358..328813 Burkholderia cenocepacia J2315 6928064 YP_002232904.1 CDS BCAM0276 NC_011001.1 329025 329495 D putative universal stress protein 329025..329495 Burkholderia cenocepacia J2315 6928065 YP_002232905.1 CDS BCAM0277 NC_011001.1 329613 329888 D hypothetical protein 329613..329888 Burkholderia cenocepacia J2315 6928066 YP_002232906.1 CDS BCAM0278 NC_011001.1 330064 330498 D putative heat shock protein 330064..330498 Burkholderia cenocepacia J2315 6928067 YP_002232907.1 CDS BCAM0279 NC_011001.1 330593 331258 R hypothetical protein complement(330593..331258) Burkholderia cenocepacia J2315 6928068 YP_002232908.1 CDS BCAM0280 NC_011001.1 331489 332139 D putative phospholipid-binding protein 331489..332139 Burkholderia cenocepacia J2315 6928069 YP_002232909.1 CDS BCAM0280A NC_011001.1 332176 332379 D hypothetical protein 332176..332379 Burkholderia cenocepacia J2315 6928070 YP_002232910.1 CDS BCAM0281 NC_011001.1 332471 334228 R putative sulfate transporter family protein complement(332471..334228) Burkholderia cenocepacia J2315 6928071 YP_002232911.1 CDS BCAM0282 NC_011001.1 334394 334627 R hypothetical protein complement(334394..334627) Burkholderia cenocepacia J2315 6928072 YP_002232912.1 CDS BCAM0283 NC_011001.1 334767 335774 R Similar to Prochlorococcus marinus subsp. pastoris (strain CCMP 1378/MED4) putative dape gene and orf2. UniProt:Q7V091 (294 aa) fasta scores: E()=3.8e-41, 44.444% id in 252 aa; homology does not extend to N terminus; putative lysine decarboxylase complement(334767..335774) Burkholderia cenocepacia J2315 6928073 YP_002232913.1 CDS BCAM0284 NC_011001.1 335806 336141 R putative cytochrome c complement(335806..336141) Burkholderia cenocepacia J2315 6928074 YP_002232914.1 CDS BCAM0285 NC_011001.1 336161 337168 R hypothetical protein complement(336161..337168) Burkholderia cenocepacia J2315 6928075 YP_002232915.1 CDS BCAM0286 NC_011001.1 337347 338336 D putative alcohol dehydrogenase 337347..338336 Burkholderia cenocepacia J2315 6928076 YP_002232916.1 CDS BCAM0287 NC_011001.1 338362 339135 R CRP family regulatory protein complement(338362..339135) Burkholderia cenocepacia J2315 6928077 YP_002232917.1 CDS BCAM0288 NC_011001.1 339443 340090 R two-component regulatory system response regulator protein complement(339443..340090) Burkholderia cenocepacia J2315 6928078 YP_002232918.1 CDS BCAM0289 NC_011001.1 340087 342084 R Similar to Xanthomonas campestris (pv. campestris) hrpx hrpx related protein. UniProt:Q8P9A6 (697 aa) fasta scores: E()=7.1e-23, 27.436% id in 667 aa, and C terminus is similar to Ralstonia solanacearum (Pseudomonas solanacearum) rs00623 probable transmembrane two component system sensor kinase transcription regulator protein. UniProt:Q8Y2Z0 (458 aa) fasta scores: E()=8.9e-64, 49.438% id in 445 aa; two-component regulatory system sensor kinase complement(340087..342084) Burkholderia cenocepacia J2315 6928079 YP_002232919.1 CDS BCAM0290 NC_011001.1 342336 342806 D putative universal stress protein 342336..342806 Burkholderia cenocepacia J2315 6928080 YP_002232920.1 CDS BCAM0291 NC_011001.1 342879 343712 R putative universal stress protein complement(342879..343712) Burkholderia cenocepacia J2315 6928081 YP_002232921.1 CDS BCAM0292 NC_011001.1 343709 344212 R putative universal stress protein complement(343709..344212) Burkholderia cenocepacia J2315 6928082 YP_002232922.1 CDS BCAM0293 NC_011001.1 344282 345481 R putative acetate kinase complement(344282..345481) Burkholderia cenocepacia J2315 6928083 YP_002232923.1 CDS BCAM0294 NC_011001.1 345490 346329 R putative universal stress protein complement(345490..346329) Burkholderia cenocepacia J2315 6928084 YP_002232924.1 CDS BCAM0295 NC_011001.1 346519 347052 D hypothetical protein 346519..347052 Burkholderia cenocepacia J2315 6928085 YP_002232925.1 CDS phbB NC_011001.1 347042 347788 D acetoacetyl-CoA reductase 347042..347788 Burkholderia cenocepacia J2315 6928086 YP_002232926.1 CDS BCAM0297 NC_011001.1 347785 349605 D Similar to Methylobacterium extorquens PhaC poly(3-hydroxyalkanoate) polymerase UniProt:PHAC_METEX (EMBL:MEPHAC) (605 aa) fasta scores: E()=3.2e-68, 39.920% id in 501 aa; homology does not extend to N terminus; putative poly(3-hydroxyalkanoate) polymerase 347785..349605 Burkholderia cenocepacia J2315 6930600 YP_002232927.1 CDS BCAM0298 NC_011001.1 349602 350633 D putative phosphate acetyl/butyryl transferase 349602..350633 Burkholderia cenocepacia J2315 6928087 YP_002232928.1 CDS BCAM0299 NC_011001.1 350630 351670 D putative zinc-binding alcoholdehydrogenase 350630..351670 Burkholderia cenocepacia J2315 6928088 YP_002232929.1 CDS BCAM0300 NC_011001.1 351752 353155 R metallo-beta-lactamase superfamily protein complement(351752..353155) Burkholderia cenocepacia J2315 6928089 YP_002232930.1 CDS BCAM0301 NC_011001.1 353286 353471 R hypothetical protein complement(353286..353471) Burkholderia cenocepacia J2315 6928090 YP_002232931.1 CDS BCAM0302 NC_011001.1 353629 354753 R putative ABC transporter protein complement(353629..354753) Burkholderia cenocepacia J2315 6928091 YP_002232932.1 CDS BCAM0303 NC_011001.1 354756 357548 R ABC transporter ATP-binding membrane protein complement(354756..357548) Burkholderia cenocepacia J2315 6928092 YP_002232933.1 CDS BCAM0304 NC_011001.1 357557 358630 R transporter system transport protein complement(357557..358630) Burkholderia cenocepacia J2315 6928093 YP_002232934.1 CDS BCAM0305 NC_011001.1 358627 360123 R outer membrane transport system protein complement(358627..360123) Burkholderia cenocepacia J2315 6928094 YP_002232935.1 CDS BCAM0306 NC_011001.1 360306 360494 R no significant database matches; hypothetical protein complement(360306..360494) Burkholderia cenocepacia J2315 6928095 YP_002232936.1 CDS BCAM0307 NC_011001.1 360777 361424 D hypothetical protein 360777..361424 Burkholderia cenocepacia J2315 6928096 YP_002232937.1 CDS BCAM0308 NC_011001.1 361465 361974 D Similar to Geobacter sulfurreducens hypothetical protein. UniProt:Q747B6 (165 aa) fasta scores: E()=1.5e-09, 31.429% id in 140 aa; homology does not extend to the N terminus; hypothetical protein 361465..361974 Burkholderia cenocepacia J2315 6928097 YP_002232938.1 CDS BCAM0309 NC_011001.1 362008 363915 D family M41 metallo peptidase. Similar to Shigella flexneri cell division protein FtsH . UniProt:FTSH_ECOLI (EMBL:AE015333) (644 aa) fasta scores: E()=4.1e-87, 51.005% id in 547 aa; homology does not extend to N-terminus or far C-terminus; putative cell division-related metallo peptidase 362008..363915 Burkholderia cenocepacia J2315 6928098 YP_002232939.1 CDS BCAM0310 NC_011001.1 363968 365794 R class I; catalyzes the formation of deoxyribonucleotides from their corresponding ribonucleotides; ribonucleotide reductase-like protein complement(363968..365794) Burkholderia cenocepacia J2315 6928099 YP_002232940.1 CDS BCAM0311 NC_011001.1 365974 366909 D putative 6-phosphofructokinase 365974..366909 Burkholderia cenocepacia J2315 6928100 YP_002232941.1 CDS BCAM0312 NC_011001.1 367028 367816 D putative polysaccharide deacetylase 367028..367816 Burkholderia cenocepacia J2315 6928101 YP_002232942.1 CDS BCAM0313 NC_011001.1 367813 369069 D hypothetical protein 367813..369069 Burkholderia cenocepacia J2315 6928102 YP_002232943.1 CDS BCAM0314 NC_011001.1 369124 369621 R Similar to N-terminus of Acinetobacter sp. (strain ADP1) hypothetical protein. UniProt:Q6FB16 (181 aa) fasta scores: E()=5.6e-14, 41.818% id in 110 aa; hypothetical protein complement(369124..369621) Burkholderia cenocepacia J2315 6928103 YP_002232944.1 CDS BCAM0315 NC_011001.1 370085 370561 D hypothetical protein 370085..370561 Burkholderia cenocepacia J2315 6928104 YP_002232945.1 CDS BCAM0316 NC_011001.1 370691 371164 R hypothetical protein complement(370691..371164) Burkholderia cenocepacia J2315 6928105 YP_002232946.1 CDS BCAM0317 NC_011001.1 371345 371962 R hypothetical protein complement(371345..371962) Burkholderia cenocepacia J2315 6928106 YP_002232947.1 CDS BCAM0318 NC_011001.1 372185 374476 D Similar to central regions of Synechocystis sp. (strain PCC 6803) ziaa zinc-transporting atpase, (zn(ii)-translocating p-type atpase). UniProt:ATZN_SYNY3 (EMBL:SSSLRG) (721 aa) fasta scores: E()=2.5e-39, 30.237% id in 549 aa, and to Chromobacterium violaceum probable cation transport p-type atpase. UniProt:Q7NUF1 (721 aa) fasta scores: E()=2.5e-113, 51.573% id in 731 aa; putative cation-transporting ATPase 372185..374476 Burkholderia cenocepacia J2315 6928107 YP_002232948.1 CDS BCAM0319 NC_011001.1 374498 375448 R putative universal stress protein complement(374498..375448) Burkholderia cenocepacia J2315 6928108 YP_002232949.1 CDS BCAM0320 NC_011001.1 375658 376224 R putative cytochrome b561 complement(375658..376224) Burkholderia cenocepacia J2315 6928109 YP_002232950.1 CDS BCAM0321 NC_011001.1 376268 376642 R Similar to C-terminus of Vibrio cholerae hypothetical protein vca0893. UniProt:Q9KL55 (169 aa) fasta scores: E()=0.00016, 32.381% id in 105 aa; hypothetical protein complement(376268..376642) Burkholderia cenocepacia J2315 6928110 YP_002232951.1 CDS BCAM0322 NC_011001.1 376806 377468 D two-component regulatory system response regulator protein 376806..377468 Burkholderia cenocepacia J2315 6928111 YP_002232952.1 CDS BCAM0323 NC_011001.1 377465 378817 D two-component regulatory system sensor kinase 377465..378817 Burkholderia cenocepacia J2315 6928112 YP_002232953.1 CDS BCAM0324 NC_011001.1 379651 380298 D Similar to Brucella abortus VirB1 UniProt:Q9KIT0 (238 aa) fasta scores: E()=3e-27, 44.749% id in 219 aa; truncated by C terminal 23 amino acids; type IV secretion system; putative type IV secretion system protein VirB1 379651..380298 Burkholderia cenocepacia J2315 6928113 YP_002232954.1 CDS BCAM0325 NC_011001.1 380323 380676 D Similar to Brucella melitensis attachment mediating protein VirB2 homolog. UniProt:Q9RPY3 (105 aa) fasta scores: E()=5.1e-06, 43.478% id in 69 aa; homology does not extend to the N terminus; putative type IV secretion system protein VirB2 380323..380676 Burkholderia cenocepacia J2315 6928114 YP_002232955.1 CDS BCAM0326 NC_011001.1 380678 381016 D putative type IV secretion system protein VirB3 380678..381016 Burkholderia cenocepacia J2315 6928115 YP_002232956.1 CDS BCAM0327 NC_011001.1 381018 383498 D putative type IV secretion system protein VirB4 381018..383498 Burkholderia cenocepacia J2315 6928116 YP_002232957.1 CDS BCAM0328 NC_011001.1 383495 384646 D putative type IV secretion system protein VirB6 383495..384646 Burkholderia cenocepacia J2315 6928117 YP_002232958.1 CDS BCAM0329 NC_011001.1 384662 385372 D hypothetical protein 384662..385372 Burkholderia cenocepacia J2315 6928118 YP_002232959.1 CDS BCAM0330 NC_011001.1 385384 385557 D putative lipoprotein 385384..385557 Burkholderia cenocepacia J2315 6928119 YP_002232960.1 CDS BCAM0331 NC_011001.1 385554 386258 D putative type IV secretion system protein VirB8 385554..386258 Burkholderia cenocepacia J2315 6928120 YP_002232961.1 CDS BCAM0332 NC_011001.1 386255 387079 D putative type IV secretion system protein VirB9 386255..387079 Burkholderia cenocepacia J2315 6928121 YP_002232962.1 CDS BCAM0333 NC_011001.1 387072 388295 D Similar to Rhizobium meliloti (Sinorhizobium meliloti) virb10 transmembrane type IV secretion protein. UniProt:Q92Z02 (390 aa) fasta scores: E()=8.6e-28, 37.709% id in 358 aa; homology does not extend to the N terminus; putative type IV secretion system protein VirB10 387072..388295 Burkholderia cenocepacia J2315 6928122 YP_002232963.1 CDS BCAM0334 NC_011001.1 388346 389443 D homology does not extend to far C-terminus; putative type IV secretion system protein VirB11 388346..389443 Burkholderia cenocepacia J2315 6928123 YP_002232964.1 CDS BCAM0337 NC_011001.1 391516 393363 D hypothetical protein 391516..393363 Burkholderia cenocepacia J2315 6928125 YP_002232965.1 CDS BCAM0338 NC_011001.1 393441 394451 D hypothetical protein 393441..394451 Burkholderia cenocepacia J2315 6928126 YP_002232966.1 CDS BCAM0339 NC_011001.1 394458 394976 D hypothetical protein 394458..394976 Burkholderia cenocepacia J2315 6928127 YP_002232967.1 CDS BCAM0340 NC_011001.1 394978 396033 D Similar to Bordetella bronchiseptica (Alcaligenes bronchisepticus) vird2 plasmid-related protein. UniProt:Q7WQ38 (331 aa) fasta scores: E()=1.1e-41, 43.607% id in 305 aa; homology does not extend to far C terminus; hypothetical protein 394978..396033 Burkholderia cenocepacia J2315 6928128 YP_002232968.1 CDS azoR NC_011001.1 396236 396835 R FMN-dependent NADH-azoreductase complement(396236..396835) Burkholderia cenocepacia J2315 6928129 YP_002232969.1 CDS BCAM0342 NC_011001.1 396948 397865 D LysR family regulatory protein 396948..397865 Burkholderia cenocepacia J2315 6930361 YP_002232970.1 CDS BCAM0343 NC_011001.1 397905 398714 R putative redoxin complement(397905..398714) Burkholderia cenocepacia J2315 6928130 YP_002232971.1 CDS BCAM0344 NC_011001.1 398916 399059 R no significant database hits; hypothetical protein complement(398916..399059) Burkholderia cenocepacia J2315 6928131 YP_002232972.1 CDS BCAM0345 NC_011001.1 399253 400257 R hypothetical protein complement(399253..400257) Burkholderia cenocepacia J2315 6928132 YP_002232973.1 CDS BCAM0346 NC_011001.1 400441 400692 D hypothetical protein 400441..400692 Burkholderia cenocepacia J2315 6928133 YP_002232974.1 CDS BCAM0347 NC_011001.1 400695 401111 D putative PIN-domain-containing protein 400695..401111 Burkholderia cenocepacia J2315 6928134 YP_002232975.1 CDS BCAM0348 NC_011001.1 401231 401956 D putative methyltransferase 401231..401956 Burkholderia cenocepacia J2315 6928135 YP_002232976.1 CDS BCAM0348a NC_011001.1 402119 402583 R hypothetical protein complement(402119..402583) Burkholderia cenocepacia J2315 6928136 YP_002232977.1 CDS BCAM0348b NC_011001.1 402662 403063 R hypothetical protein complement(402662..403063) Burkholderia cenocepacia J2315 6928137 YP_002232978.1 CDS BCAM0354 NC_011001.1 403174 403554 D putative transcriptional regulator 403174..403554 Burkholderia cenocepacia J2315 6928138 YP_002232979.1 CDS RS04417 NC_011001.1 404492 406201 D Similar to Ralstonia solanacearum (Pseudomonas solanacearum) rs04417 probable composite atp-binding transmembrane abc transporter protein. UniProt:Q8Y258 (592 aa) fasta scores: E()=1.1e-40, 31.016% id in 561 aa; contains 32 amino acid C terminal truncation; ABC transporter ATP-binding membrane protein 404492..406201 Burkholderia cenocepacia J2315 6928140 YP_002232980.1 CDS BCAM0356 NC_011001.1 406220 407257 R putative aldo/keto reductase complement(406220..407257) Burkholderia cenocepacia J2315 6930628 YP_002232981.1 CDS BCAM0357 NC_011001.1 407385 408266 D LysR family regulatory protein 407385..408266 Burkholderia cenocepacia J2315 6928141 YP_002232982.1 CDS BCAM0358 NC_011001.1 408444 408743 D ArsR family regulatory protein 408444..408743 Burkholderia cenocepacia J2315 6928142 YP_002232983.1 CDS BCAM0359 NC_011001.1 408764 410116 D putative pyridoxal-dependent decarboxylase 408764..410116 Burkholderia cenocepacia J2315 6928143 YP_002232984.1 CDS BCAM0360 NC_011001.1 410120 411037 R LysR family regulatory protein complement(410120..411037) Burkholderia cenocepacia J2315 6928144 YP_002232985.1 CDS BCAM0361 NC_011001.1 411182 412405 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 411182..412405 Burkholderia cenocepacia J2315 6928145 YP_002232986.1 CDS BCAM0362 NC_011001.1 412444 412992 D Similar to Ralstonia solanacearum (Pseudomonas solanacearum) rs04533 hypothetical protein rsc2672. UniProt:Q8XW03 (159 aa) fasta scores: E()=6.5e-13, 35.294% id in 153 aa; contains extra 26 amino acids on N terminus; hypothetical protein 412444..412992 Burkholderia cenocepacia J2315 6928146 YP_002232987.1 CDS BCAM0363 NC_011001.1 413319 415784 D Similar to Bacteroides thetaiotaomicron hypothetical protein. UniProt:Q8A0C8 (717 aa) fasta scores: E()=6.8e-40, 34.505% id in 768 aa; higher similarity at C terminus than N terminus; putative lipoprotein 413319..415784 Burkholderia cenocepacia J2315 6928147 YP_002232988.1 CDS BCAM0364 NC_011001.1 415850 418528 D putative lipoprotein 415850..418528 Burkholderia cenocepacia J2315 6928148 YP_002232989.1 CDS BCAM0365 NC_011001.1 418702 419502 D putative short chain dehydrogenase 418702..419502 Burkholderia cenocepacia J2315 6928149 YP_002232990.1 CDS BCAM0366 NC_011001.1 419590 420369 R putative acid phosphatase complement(419590..420369) Burkholderia cenocepacia J2315 6928150 YP_002232991.1 CDS BCAM0367 NC_011001.1 420559 420867 R putative branched-chain amino acid transport protein complement(420559..420867) Burkholderia cenocepacia J2315 6928151 YP_002232992.1 CDS BCAM0368 NC_011001.1 420860 421594 R putative branched-chain amino acid transport protein complement(420860..421594) Burkholderia cenocepacia J2315 6928152 YP_002232993.1 CDS BCAM0369 NC_011001.1 421720 422178 D AnsC family regulatory protein 421720..422178 Burkholderia cenocepacia J2315 6928153 YP_002232994.1 CDS BCAM0370 NC_011001.1 422393 422962 D no significant database hits; hypothetical protein 422393..422962 Burkholderia cenocepacia J2315 6928154 YP_002232995.1 CDS BCAM0371 NC_011001.1 423111 423788 D Similar to Escherichia coli O6 hypothetical protein YebB UniProt:Q8FGR2_ECOL6 (EMBL:AE016761) (224 aa) fasta scores: E()=3.7e-29, 43.548% id in 186 aa; homology does not extend to the N terminus.; hypothetical protein 423111..423788 Burkholderia cenocepacia J2315 6928155 YP_002232996.1 CDS BCAM0372 NC_011001.1 423843 424475 R putative transporter-LysE family complement(423843..424475) Burkholderia cenocepacia J2315 6928156 YP_002232997.1 CDS BCAM0373 NC_011001.1 424618 425487 R hypothetical protein complement(424618..425487) Burkholderia cenocepacia J2315 6928157 YP_002232998.1 CDS BCAM0374 NC_011001.1 425594 425926 R hypothetical protein complement(425594..425926) Burkholderia cenocepacia J2315 6928158 YP_002232999.1 CDS BCAM0375 NC_011001.1 425980 427413 R major facilitator superfamily protein complement(425980..427413) Burkholderia cenocepacia J2315 6928159 YP_002233000.1 CDS BCAM0376 NC_011001.1 427436 428137 R hypothetical protein complement(427436..428137) Burkholderia cenocepacia J2315 6928160 YP_002233001.1 CDS BCAM0377 NC_011001.1 428349 428675 D putative thioredoxin 428349..428675 Burkholderia cenocepacia J2315 6928161 YP_002233002.1 CDS BCAM0378 NC_011001.1 428686 429105 D hypothetical protein 428686..429105 Burkholderia cenocepacia J2315 6928162 YP_002233003.1 CDS BCAM0379 NC_011001.1 429194 431014 R Similar to Chromobacterium violaceum probable sensor histidine kinase/response regulator. UniProt:Q7NVX8 (734 aa) fasta scores: E()=7.7e-24, 26.592% id in 628 aa; truncated by 100+ amino acids at C terminus; hybrid two-component system kinase-response regulator protein complement(429194..431014) Burkholderia cenocepacia J2315 6928163 YP_002233004.1 CDS BCAM0380 NC_011001.1 431016 431519 R hypothetical protein complement(431016..431519) Burkholderia cenocepacia J2315 6928164 YP_002233005.1 CDS BCAM0381 NC_011001.1 431588 432463 R Similar to Chromobacterium violaceum hypothetical protein. UniProt:Q7NTP6 (287 aa) fasta scores: E()=8e-14, 29.555% id in 247 aa; homology does not extend to the C terminus; two-component regulatory system response regulator protein complement(431588..432463) Burkholderia cenocepacia J2315 6928165 YP_002233006.1 CDS BCAM0382 NC_011001.1 432828 433415 D putative lipoprotein 432828..433415 Burkholderia cenocepacia J2315 6928166 YP_002233007.1 CDS BCAM0383 NC_011001.1 433538 434365 D putative lipoprotein 433538..434365 Burkholderia cenocepacia J2315 6928167 YP_002233008.1 CDS BCAM0384 NC_011001.1 434497 435504 D no significant database hits; putative lipoprotein 434497..435504 Burkholderia cenocepacia J2315 6928168 YP_002233009.1 CDS BCAM0385 NC_011001.1 435704 436720 R catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase complement(435704..436720) Burkholderia cenocepacia J2315 6928169 YP_002233010.1 CDS BCAM0386 NC_011001.1 436915 437415 D AnsC family regulatory protein 436915..437415 Burkholderia cenocepacia J2315 6928170 YP_002233011.1 CDS poxB NC_011001.1 437577 439283 D catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 437577..439283 Burkholderia cenocepacia J2315 6928171 YP_002233012.1 CDS BCAM0388 NC_011001.1 439751 440341 D putative phospholipid n-methyltransferase 439751..440341 Burkholderia cenocepacia J2315 6930609 YP_002233013.1 CDS BCAM0389 NC_011001.1 440495 441928 D putative alkaline phosphatase 440495..441928 Burkholderia cenocepacia J2315 6928172 YP_002233014.1 CDS BCAM0390 NC_011001.1 441961 443352 D putative alkaline phosphatase 441961..443352 Burkholderia cenocepacia J2315 6928173 YP_002233015.1 CDS BCAM0391 NC_011001.1 443369 444112 D hypothetical protein 443369..444112 Burkholderia cenocepacia J2315 6928174 YP_002233016.1 CDS BCAM0392 NC_011001.1 444218 445357 R putative acetyltransferase complement(444218..445357) Burkholderia cenocepacia J2315 6928175 YP_002233017.1 CDS BCAM0393 NC_011001.1 445354 446160 R putative beta-lactamase complement(445354..446160) Burkholderia cenocepacia J2315 6928176 YP_002233018.1 CDS BCAM0394 NC_011001.1 446486 446836 D hypothetical protein 446486..446836 Burkholderia cenocepacia J2315 6928177 YP_002233019.1 CDS BCAM0395 NC_011001.1 446887 447531 D Similar to middle section of Oryza sativa (japonica cultivar-group) p0640e12.104 hypothetical protein p0640e12.104. UniProt:Q84NP0 (413 aa) fasta scores: E()=1.5, 32.203% id in 118 aa; hypothetical protein 446887..447531 Burkholderia cenocepacia J2315 6928178 YP_002233020.1 CDS BCAM0396 NC_011001.1 447559 448434 R LysR family regulatory protein complement(447559..448434) Burkholderia cenocepacia J2315 6928179 YP_002233021.1 CDS BCAM0397 NC_011001.1 448563 449915 D hypothetical protein 448563..449915 Burkholderia cenocepacia J2315 6928180 YP_002233022.1 CDS BCAM0398 NC_011001.1 449959 450150 D hypothetical protein 449959..450150 Burkholderia cenocepacia J2315 6928181 YP_002233023.1 CDS cynR NC_011001.1 450257 451186 R controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR complement(450257..451186) Burkholderia cenocepacia J2315 6928182 YP_002233024.1 CDS cynT NC_011001.1 451300 451959 D carbonic anhydrase 451300..451959 Burkholderia cenocepacia J2315 6930430 YP_002233025.1 CDS cynS NC_011001.1 451990 452460 D catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 451990..452460 Burkholderia cenocepacia J2315 6930432 YP_002233026.1 CDS guaD NC_011001.1 452558 453025 D guanine deaminase 452558..453025 Burkholderia cenocepacia J2315 6930431 YP_002233027.1 CDS BCAM0403 NC_011001.1 453189 453623 D putative acetyltransferase 453189..453623 Burkholderia cenocepacia J2315 6930488 YP_002233028.1 CDS BCAM0404 NC_011001.1 453685 454581 R LysR family regulatory protein complement(453685..454581) Burkholderia cenocepacia J2315 6928183 YP_002233029.1 CDS BCAM0405 NC_011001.1 454720 455505 D putative trans-aconitate 2-methyltransferase 454720..455505 Burkholderia cenocepacia J2315 6928184 YP_002233030.1 CDS BCAM0406 NC_011001.1 455536 456126 R putative acetyltransferase complement(455536..456126) Burkholderia cenocepacia J2315 6928185 YP_002233031.1 CDS BCAM0407 NC_011001.1 456872 458035 D putative porin 456872..458035 Burkholderia cenocepacia J2315 6928186 YP_002233032.1 CDS BCAM0408 NC_011001.1 458105 460552 R Similar to Burkholderia pseudomallei (Pseudomonas pseudomallei) PlcN non-hemolytic phospholipase C precursor UniProt:Q9RGS8 (EMBL:AF107252) (700 aa) fasta scores: E()=3.1e-63, 46.788% id in 716 aa; homology does not extend to the far C-terminus; putative phospholipase C complement(458105..460552) Burkholderia cenocepacia J2315 6928187 YP_002233033.1 CDS BCAM0408a NC_011001.1 460594 460854 R no significant database matches; doubtful CDS, but contains significant hydrophobic feature; hypothetical protein complement(460594..460854) Burkholderia cenocepacia J2315 6928188 YP_002233034.1 CDS BCAM0409 NC_011001.1 460900 461577 R hypothetical protein complement(460900..461577) Burkholderia cenocepacia J2315 6928189 YP_002233035.1 CDS BCAM0410 NC_011001.1 461601 462545 R putative glycine betaine transporter complement(461601..462545) Burkholderia cenocepacia J2315 6928190 YP_002233036.1 CDS BCAM0411 NC_011001.1 462810 463490 D MgtC family protein 462810..463490 Burkholderia cenocepacia J2315 6928191 YP_002233037.1 CDS BCAM0412 NC_011001.1 463535 464302 D DeoR family regulatory protein 463535..464302 Burkholderia cenocepacia J2315 6928192 YP_002233038.1 CDS BCAM0412a NC_011001.1 464421 464786 D LysR family regulatory protein 464421..464786 Burkholderia cenocepacia J2315 6928193 YP_002233039.1 CDS BCAM0413 NC_011001.1 464817 466166 R Low level of similarity to Nitrosomonas europaea hypothetical protein. UniProt:Q82UF2 (439 aa) fasta scores: E()=1.2e-14, 25.607% id in 453 aa; hypothetical protein complement(464817..466166) Burkholderia cenocepacia J2315 6928194 YP_002233040.1 CDS BCAM0414 NC_011001.1 466286 466834 R hypothetical protein complement(466286..466834) Burkholderia cenocepacia J2315 6928195 YP_002233041.1 CDS BCAM0415 NC_011001.1 466954 468444 R betaine aldehyde dehydrogenase complement(466954..468444) Burkholderia cenocepacia J2315 6928196 YP_002233042.1 CDS AGMAT NC_011001.1 468458 469408 R putative agmatinase complement(468458..469408) Burkholderia cenocepacia J2315 6928197 YP_002233043.1 CDS BCAM0417 NC_011001.1 469563 470447 R LuxR superfamily regulatory protein complement(469563..470447) Burkholderia cenocepacia J2315 6930338 YP_002233044.1 CDS BCAM0418 NC_011001.1 470653 470997 D hypothetical protein 470653..470997 Burkholderia cenocepacia J2315 6928198 YP_002233045.1 CDS BCAM0419 NC_011001.1 471089 472543 D N-terminus is similar to Streptomyces avermitilis hypothetical protein. UniProt:Q82K18 (511 aa) fasta scores: E()=3.3e-43, 44.631% id in 298 aa; putative FAD dependent oxidoreductase 471089..472543 Burkholderia cenocepacia J2315 6928199 YP_002233046.1 CDS BCAM0420 NC_011001.1 472631 473821 D hypothetical protein 472631..473821 Burkholderia cenocepacia J2315 6928200 YP_002233047.1 CDS BCAM0421 NC_011001.1 473945 474865 D LysR family regulatory protein 473945..474865 Burkholderia cenocepacia J2315 6928201 YP_002233048.1 CDS BCAM0422 NC_011001.1 474881 475711 R LuxR superfamily regulatory protein complement(474881..475711) Burkholderia cenocepacia J2315 6928202 YP_002233049.1 CDS BCAM0423 NC_011001.1 475910 477676 D putative amidohydrolase 475910..477676 Burkholderia cenocepacia J2315 6928203 YP_002233050.1 CDS BCAM0424 NC_011001.1 477855 478970 D putative polyamine transport protein 477855..478970 Burkholderia cenocepacia J2315 6928204 YP_002233051.1 CDS BCAM0425 NC_011001.1 479059 480657 D hypothetical protein 479059..480657 Burkholderia cenocepacia J2315 6928205 YP_002233052.1 CDS BCAM0426 NC_011001.1 480754 481830 D family C45 cysteine peptidase; cysteine peptidase/transferase, family C45 480754..481830 Burkholderia cenocepacia J2315 6928206 YP_002233053.1 CDS dgoT NC_011001.1 481895 483286 R Contains 30 amino acid N-terminal extension in comparison to some proteins; D-galactonate transporter complement(481895..483286) Burkholderia cenocepacia J2315 6928207 YP_002233054.1 CDS BCAM0428 NC_011001.1 483469 484332 R hypothetical protein complement(483469..484332) Burkholderia cenocepacia J2315 6930440 YP_002233055.1 CDS BCAM0429 NC_011001.1 484373 484747 R hypothetical protein complement(484373..484747) Burkholderia cenocepacia J2315 6928208 YP_002233056.1 CDS BCAM0430 NC_011001.1 484765 485106 R putative transcriptional regulator complement(484765..485106) Burkholderia cenocepacia J2315 6928209 YP_002233057.1 CDS BCAM0431 NC_011001.1 485282 485914 D glutathoine S-transferase 485282..485914 Burkholderia cenocepacia J2315 6928210 YP_002233058.1 CDS BCAM0432 NC_011001.1 486002 486388 D hypothetical protein 486002..486388 Burkholderia cenocepacia J2315 6928211 YP_002233059.1 CDS BCAM0433 NC_011001.1 486444 487772 D efflux system outer membrane protein 486444..487772 Burkholderia cenocepacia J2315 6928212 YP_002233060.1 CDS BCAM0434 NC_011001.1 487784 489319 D contains 90 amino acid C terminal extension; putative cation efflux protein 487784..489319 Burkholderia cenocepacia J2315 6928213 YP_002233061.1 CDS cusA NC_011001.1 489316 492522 D cation efflux system protein 489316..492522 Burkholderia cenocepacia J2315 6928214 YP_002233062.1 CDS BCAM0436 NC_011001.1 492519 492887 D hypothetical protein 492519..492887 Burkholderia cenocepacia J2315 6930429 YP_002233063.1 CDS BCAM0437 NC_011001.1 492995 494005 R putative sodium/calcium exchanger protein complement(492995..494005) Burkholderia cenocepacia J2315 6928215 YP_002233064.1 CDS BCAM0438 NC_011001.1 494360 494635 D hypothetical protein 494360..494635 Burkholderia cenocepacia J2315 6930324 YP_002233065.1 CDS BCAM0439 NC_011001.1 494648 495667 D putative cation efflux protein 494648..495667 Burkholderia cenocepacia J2315 6928217 YP_002233066.1 CDS BCAM0440 NC_011001.1 495670 495855 D hypothetical protein 495670..495855 Burkholderia cenocepacia J2315 6928218 YP_002233067.1 CDS BCAM0441 NC_011001.1 495946 497154 D major facilitator superfamily protein 495946..497154 Burkholderia cenocepacia J2315 6928219 YP_002233068.1 CDS BCAM0442 NC_011001.1 497179 498588 R two-component regulatory system sensor kinase complement(497179..498588) Burkholderia cenocepacia J2315 6928220 YP_002233069.1 CDS irlR NC_011001.1 498585 499256 R two-component regulatory system response regulator protein complement(498585..499256) Burkholderia cenocepacia J2315 6928221 YP_002233070.1 CDS BCAM0444 NC_011001.1 499490 499846 D hypothetical protein 499490..499846 Burkholderia cenocepacia J2315 6930515 YP_002233071.1 CDS BCAM0445 NC_011001.1 499929 500216 D hypothetical protein 499929..500216 Burkholderia cenocepacia J2315 6928222 YP_002233072.1 CDS BCAM0446 NC_011001.1 500213 501727 D outer membrane efflux protein 500213..501727 Burkholderia cenocepacia J2315 6928223 YP_002233073.1 CDS BCAM0447 NC_011001.1 501729 503024 D putative exported multicopper oxidase 501729..503024 Burkholderia cenocepacia J2315 6928224 YP_002233074.1 CDS BCAM0448 NC_011001.1 503091 503447 D hypothetical protein 503091..503447 Burkholderia cenocepacia J2315 6928225 YP_002233075.1 CDS BCAM0449 NC_011001.1 503462 503842 D putative copper-resistance exported protein 503462..503842 Burkholderia cenocepacia J2315 6928226 YP_002233076.1 CDS BCAM0450 NC_011001.1 503839 504780 D putative copper-resistance membrane protein 503839..504780 Burkholderia cenocepacia J2315 6928227 YP_002233077.1 CDS BCAM0451 NC_011001.1 504950 506764 D putative extracellular endonuclease/exonuclease/phosphatase family protein 504950..506764 Burkholderia cenocepacia J2315 6928228 YP_002233078.1 CDS BCAM0452 NC_011001.1 507468 509315 D family S10 serine peptidase 507468..509315 Burkholderia cenocepacia J2315 6928229 YP_002233079.1 CDS BCAM0453 NC_011001.1 509371 509790 D hypothetical protein 509371..509790 Burkholderia cenocepacia J2315 6928230 YP_002233080.1 CDS BCAM0456 NC_011001.1 510966 512066 D putative ThiJ/PfpI family protein 510966..512066 Burkholderia cenocepacia J2315 6928232 YP_002233081.1 CDS BCAM0457 NC_011001.1 512079 512498 R no significant database matches; hypothetical protein complement(512079..512498) Burkholderia cenocepacia J2315 6928233 YP_002233082.1 CDS BCAM0459 NC_011001.1 512862 514340 R Contains additional C terminal DUF domain; cysteine desulfurase complement(512862..514340) Burkholderia cenocepacia J2315 6928235 YP_002233083.1 CDS BCAM0460 NC_011001.1 514641 515411 R putative amino acid ABC transporter ATP-binding protein complement(514641..515411) Burkholderia cenocepacia J2315 6928236 YP_002233084.1 CDS BCAM0461 NC_011001.1 515408 516058 R putative amino acid ABC transporter permease complement(515408..516058) Burkholderia cenocepacia J2315 6928237 YP_002233085.1 CDS BCAM0462 NC_011001.1 516062 516901 R cystine-binding periplasmic protein precursor complement(516062..516901) Burkholderia cenocepacia J2315 6928238 YP_002233086.1 CDS metC NC_011001.1 516957 518120 R putative cystathionine beta-lyase complement(516957..518120) Burkholderia cenocepacia J2315 6928239 YP_002233087.1 CDS BCAM0464 NC_011001.1 518235 519182 D LysR family regulatory protein 518235..519182 Burkholderia cenocepacia J2315 6930541 YP_002233088.1 CDS BCAM0465 NC_011001.1 519545 520798 D major facilitator superfamily protein 519545..520798 Burkholderia cenocepacia J2315 6928240 YP_002233089.1 CDS BCAM0466 NC_011001.1 520921 521850 D LysR family regulatory protein 520921..521850 Burkholderia cenocepacia J2315 6928241 YP_002233090.1 CDS BCAM0467 NC_011001.1 521966 522460 D hypothetical protein 521966..522460 Burkholderia cenocepacia J2315 6928242 YP_002233091.1 CDS BCAM0468 NC_011001.1 522498 523517 D hypothetical protein 522498..523517 Burkholderia cenocepacia J2315 6928243 YP_002233092.1 CDS BCAM0469 NC_011001.1 523568 525034 D putative aldehyde dehydrogenase 523568..525034 Burkholderia cenocepacia J2315 6928244 YP_002233093.1 CDS macA NC_011001.1 525042 526109 D maleylacetate reductase 525042..526109 Burkholderia cenocepacia J2315 6928245 YP_002233094.1 CDS BCAM0471 NC_011001.1 526217 526528 D hypothetical protein 526217..526528 Burkholderia cenocepacia J2315 6930536 YP_002233095.1 CDS BCAM0472 NC_011001.1 526532 526867 D Rieske [2Fe-2S] protein 526532..526867 Burkholderia cenocepacia J2315 6928246 YP_002233096.1 CDS BCAM0473 NC_011001.1 527061 528149 D putative gram-negative porin 527061..528149 Burkholderia cenocepacia J2315 6928247 YP_002233097.1 CDS BCAM0474 NC_011001.1 528290 528541 R no significant database matches; hypothetical protein complement(528290..528541) Burkholderia cenocepacia J2315 6928248 YP_002233098.1 CDS BCAM0475 NC_011001.1 528639 529442 D no significant database hits; hypothetical protein 528639..529442 Burkholderia cenocepacia J2315 6928249 YP_002233099.1 CDS BCAM0476 NC_011001.1 529443 529991 D no significant database hits; hypothetical protein 529443..529991 Burkholderia cenocepacia J2315 6928250 YP_002233100.1 CDS BCAM0476a NC_011001.1 530293 530643 D no significant database hits; hypothetical protein 530293..530643 Burkholderia cenocepacia J2315 6928251 YP_002233101.1 CDS glmS2 NC_011001.1 530700 532529 R family C44 cysteine peptidase; glucosamine--fructose-6-phosphate aminotransferase 2 complement(530700..532529) Burkholderia cenocepacia J2315 6928252 YP_002233102.1 CDS BCAM0479 NC_011001.1 532686 533177 D AnsC family regulatory protein 532686..533177 Burkholderia cenocepacia J2315 6930476 YP_002233103.1 CDS BCAM0480 NC_011001.1 533207 534061 R also called ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(533207..534061) Burkholderia cenocepacia J2315 6928253 YP_002233104.1 CDS BCAM0481 NC_011001.1 534118 534957 D AraC family regulatory protein 534118..534957 Burkholderia cenocepacia J2315 6928254 YP_002233105.1 CDS BCAM0482 NC_011001.1 534971 535504 R putative methylated-DNA--protein-cysteine methyltransferase complement(534971..535504) Burkholderia cenocepacia J2315 6928255 YP_002233106.1 CDS BCAM0483 NC_011001.1 535501 536952 R ADA-like AraC family regulatory protein complement(535501..536952) Burkholderia cenocepacia J2315 6928256 YP_002233107.1 CDS BCAM0484 NC_011001.1 537255 538586 D homology does not extend to far N terminus; putative hexuronate transporter 537255..538586 Burkholderia cenocepacia J2315 6928257 YP_002233108.1 CDS BCAM0485 NC_011001.1 538663 539655 R LacI family regulatory protein complement(538663..539655) Burkholderia cenocepacia J2315 6928258 YP_002233109.1 CDS BCAM0486 NC_011001.1 539838 540674 D NAD dependent epimerase/dehydratase family protein 539838..540674 Burkholderia cenocepacia J2315 6928259 YP_002233110.1 CDS BCAM0487 NC_011001.1 540703 541023 R hypothetical protein complement(540703..541023) Burkholderia cenocepacia J2315 6928260 YP_002233111.1 CDS BCAM0488 NC_011001.1 541156 541851 R hypothetical protein complement(541156..541851) Burkholderia cenocepacia J2315 6928261 YP_002233112.1 CDS BCAM0489 NC_011001.1 541952 542422 R MerR family regulatory protein complement(541952..542422) Burkholderia cenocepacia J2315 6928262 YP_002233113.1 CDS BCAM0490 NC_011001.1 542479 543720 D putative NADH oxidoreductase 542479..543720 Burkholderia cenocepacia J2315 6928263 YP_002233114.1 CDS BCAM0491 NC_011001.1 543815 545938 R TonB-dependent receptor complement(543815..545938) Burkholderia cenocepacia J2315 6928264 YP_002233115.1 CDS BCAM0492 NC_011001.1 545979 547448 R putative transmembrane peptidase complement(545979..547448) Burkholderia cenocepacia J2315 6928265 YP_002233116.1 CDS BCAM0493 NC_011001.1 547691 548176 R hypothetical protein complement(547691..548176) Burkholderia cenocepacia J2315 6928266 YP_002233117.1 CDS BCAM0494 NC_011001.1 548259 548462 R no significant database hits; hypothetical protein complement(548259..548462) Burkholderia cenocepacia J2315 6928267 YP_002233118.1 CDS BCAM0495 NC_011001.1 548551 548940 R putative DNA-binding protein complement(548551..548940) Burkholderia cenocepacia J2315 6928268 YP_002233119.1 CDS BCAM0495a NC_011001.1 549016 549165 D no significant database hits; hypothetical protein 549016..549165 Burkholderia cenocepacia J2315 6928269 YP_002233120.1 CDS BCAM0496 NC_011001.1 549463 550095 D putative transporter-LysE family 549463..550095 Burkholderia cenocepacia J2315 6928270 YP_002233121.1 CDS BCAM0497 NC_011001.1 550332 551369 D putative lipoprotein 550332..551369 Burkholderia cenocepacia J2315 6928271 YP_002233122.1 CDS BCAM0498 NC_011001.1 551461 553089 R putative aldehyde dehydrogenase complement(551461..553089) Burkholderia cenocepacia J2315 6928272 YP_002233123.1 CDS BCAM0499 NC_011001.1 553828 556026 D TonB-dependent receptor 553828..556026 Burkholderia cenocepacia J2315 6928273 YP_002233124.1 CDS BCAM0500 NC_011001.1 556114 556575 D hypothetical protein 556114..556575 Burkholderia cenocepacia J2315 6928274 YP_002233125.1 CDS BCAM0501 NC_011001.1 556595 557518 R LysR family regulatory protein complement(556595..557518) Burkholderia cenocepacia J2315 6928275 YP_002233126.1 CDS BCAM0502 NC_011001.1 557768 558796 D hypothetical protein 557768..558796 Burkholderia cenocepacia J2315 6928276 YP_002233127.1 CDS BCAM0504 NC_011001.1 559036 559233 R CsbD-like protein complement(559036..559233) Burkholderia cenocepacia J2315 6928277 YP_002233128.1 CDS BCAM0505 NC_011001.1 559287 559637 R putative membrane-attached protein complement(559287..559637) Burkholderia cenocepacia J2315 6928278 YP_002233129.1 CDS BCAM0506 NC_011001.1 560275 561807 D LuxR/PAS superfamily regulatory protein 560275..561807 Burkholderia cenocepacia J2315 6928279 YP_002233130.1 CDS BCAM0507 NC_011001.1 561951 562142 D CsbD-like protein 561951..562142 Burkholderia cenocepacia J2315 6928280 YP_002233131.1 CDS BCAM0508 NC_011001.1 562566 563717 D putative periplasmic binding protein 562566..563717 Burkholderia cenocepacia J2315 6928281 YP_002233132.1 CDS BCAM0509 NC_011001.1 563883 565055 D putative FAD dependent oxidoreductase 563883..565055 Burkholderia cenocepacia J2315 6928282 YP_002233133.1 CDS BCAM0510 NC_011001.1 565249 565458 D hypothetical protein 565249..565458 Burkholderia cenocepacia J2315 6928283 YP_002233134.1 CDS BCAM0511 NC_011001.1 565625 566806 R family S12 serine peptidase; putative esterase complement(565625..566806) Burkholderia cenocepacia J2315 6928284 YP_002233135.1 CDS BCAM0512 NC_011001.1 567084 568211 D putative aminotransferase 567084..568211 Burkholderia cenocepacia J2315 6928285 YP_002233136.1 CDS BCAM0513 NC_011001.1 568308 568877 D hypothetical protein 568308..568877 Burkholderia cenocepacia J2315 6928286 YP_002233137.1 CDS BCAM0514 NC_011001.1 568970 569545 R TetR family regulatory protein complement(568970..569545) Burkholderia cenocepacia J2315 6928287 YP_002233138.1 CDS BCAM0515 NC_011001.1 569691 570383 D homology does not extend to far N terminus; Similar to Saccharomyces cerevisiae (Baker's yeast) gtt2 glutathione s-transferase ii, (gst-ii). UniProt:Q12390 (EMBL:AY557940) (233 aa) fasta scores: E()=2.1e-62, 77.670% id in 206 aa; homology does not extend to N terminal 15 amino acids; glutathione S-transferase 569691..570383 Burkholderia cenocepacia J2315 6928288 YP_002233139.1 CDS BCAM0516 NC_011001.1 570437 570919 D putative exported glyoxalase 570437..570919 Burkholderia cenocepacia J2315 6928289 YP_002233140.1 CDS BCAM0517 NC_011001.1 570916 571596 D hypothetical protein 570916..571596 Burkholderia cenocepacia J2315 6928290 YP_002233141.1 CDS BCAM0518 NC_011001.1 571601 572572 R LysR family regulatory protein complement(571601..572572) Burkholderia cenocepacia J2315 6928291 YP_002233142.1 CDS maeB NC_011001.1 572708 575008 D catalyzes the oxidative decarboxylation of malate to form pyruvate; malic enzyme 572708..575008 Burkholderia cenocepacia J2315 6928292 YP_002233143.1 CDS BCAM0521 NC_011001.1 576917 577690 R putative IstB-like ATP binding protein complement(576917..577690) Burkholderia cenocepacia J2315 6930538 YP_002233144.1 CDS BCAM0522 NC_011001.1 577687 578715 R putative integrase complement(577687..578715) Burkholderia cenocepacia J2315 6928293 YP_002233145.1 CDS BCAM0524 NC_011001.1 579561 580739 R AAA family ATPase complement(579561..580739) Burkholderia cenocepacia J2315 6928294 YP_002233146.1 CDS BCAM0525 NC_011001.1 581305 582504 D putative aminotransferase 581305..582504 Burkholderia cenocepacia J2315 6928295 YP_002233147.1 CDS BCAM0525A NC_011001.1 582517 582708 D hypothetical protein 582517..582708 Burkholderia cenocepacia J2315 6928296 YP_002233148.1 CDS BCAM0526 NC_011001.1 582803 583390 D pyridoxamine 5'-phosphate oxidase family protein 582803..583390 Burkholderia cenocepacia J2315 6928297 YP_002233149.1 CDS BCAM0527 NC_011001.1 583416 584306 R LysR family regulatory protein complement(583416..584306) Burkholderia cenocepacia J2315 6928298 YP_002233150.1 CDS BCAM0528 NC_011001.1 584441 585145 D putative oxidoreductase/short-chain dehydrogenase 584441..585145 Burkholderia cenocepacia J2315 6928299 YP_002233151.1 CDS BCAM0529 NC_011001.1 585349 586626 D putative hydrolase 585349..586626 Burkholderia cenocepacia J2315 6928300 YP_002233152.1 CDS BCAM0529A NC_011001.1 586744 587115 R hypothetical protein complement(586744..587115) Burkholderia cenocepacia J2315 6928301 YP_002233153.1 CDS BCAM0530 NC_011001.1 587238 588623 R GntR family regulatory protein complement(587238..588623) Burkholderia cenocepacia J2315 6928302 YP_002233154.1 CDS mvaA NC_011001.1 588787 590073 D 3-hydroxy-3-methylglutaryl-coenzyme A reductase 588787..590073 Burkholderia cenocepacia J2315 6928303 YP_002233155.1 CDS BCAM0532 NC_011001.1 590162 590659 D hypothetical protein 590162..590659 Burkholderia cenocepacia J2315 6930559 YP_002233156.1 CDS BCAM0533 NC_011001.1 590659 592038 D hypothetical protein 590659..592038 Burkholderia cenocepacia J2315 6928304 YP_002233157.1 CDS BCAM0534 NC_011001.1 592295 593338 D putative hydrolase 592295..593338 Burkholderia cenocepacia J2315 6928305 YP_002233158.1 CDS BCAM0535 NC_011001.1 593338 593880 D hypothetical protein 593338..593880 Burkholderia cenocepacia J2315 6928306 YP_002233159.1 CDS BCAM0536 NC_011001.1 594053 594514 D hypothetical protein 594053..594514 Burkholderia cenocepacia J2315 6928307 YP_002233160.1 CDS BCAM0537 NC_011001.1 594599 595390 D family S33 serine peptidase 594599..595390 Burkholderia cenocepacia J2315 6928308 YP_002233161.1 CDS BCAM0538 NC_011001.1 595466 596866 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 595466..596866 Burkholderia cenocepacia J2315 6928309 YP_002233162.1 CDS BCAM0539 NC_011001.1 597224 597694 D hypothetical protein 597224..597694 Burkholderia cenocepacia J2315 6928310 YP_002233163.1 CDS BCAM0540 NC_011001.1 597723 598661 D putative serine acetyltransferase 597723..598661 Burkholderia cenocepacia J2315 6928311 YP_002233164.1 CDS BCAM0541 NC_011001.1 598670 598891 D putative DNA-binding protein 598670..598891 Burkholderia cenocepacia J2315 6928312 YP_002233165.1 CDS BCAM0542 NC_011001.1 599028 599960 D hypothetical protein 599028..599960 Burkholderia cenocepacia J2315 6928313 YP_002233166.1 CDS BCAM0543 NC_011001.1 600019 601935 D putative aminotransferase 600019..601935 Burkholderia cenocepacia J2315 6928314 YP_002233167.1 CDS BCAM0544 NC_011001.1 602011 602895 R putative acetylglutamate kinase complement(602011..602895) Burkholderia cenocepacia J2315 6928315 YP_002233168.1 CDS BCAM0545 NC_011001.1 602944 603465 R putative PTS transport system complement(602944..603465) Burkholderia cenocepacia J2315 6928316 YP_002233169.1 CDS BCAM0545a NC_011001.1 603600 603821 R no significant database matches; hypothetical protein complement(603600..603821) Burkholderia cenocepacia J2315 6928317 YP_002233170.1 CDS BCAM0546 NC_011001.1 604233 605462 R no significant database matches; hypothetical protein complement(604233..605462) Burkholderia cenocepacia J2315 6928318 YP_002233171.1 CDS BCAM0547 NC_011001.1 605562 606176 R putative LysE type translocator complement(605562..606176) Burkholderia cenocepacia J2315 6928319 YP_002233172.1 CDS groEL NC_011001.1 606355 607995 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia and high GC gram-positive bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the R. leguminosarum protein in this cluster is transcribed under anaerobic conditions and is not necessary for growth; chaperonin GroEL complement(606355..607995) Burkholderia cenocepacia J2315 6928320 YP_002233173.1 CDS groES NC_011001.1 608008 608298 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(608008..608298) Burkholderia cenocepacia J2315 6930485 YP_002233174.1 CDS BCAM0550 NC_011001.1 608441 609724 R putative exported lipase complement(608441..609724) Burkholderia cenocepacia J2315 6930486 YP_002233175.1 CDS BCAM0551 NC_011001.1 610110 610790 D hypothetical protein 610110..610790 Burkholderia cenocepacia J2315 6928321 YP_002233176.1 CDS BCAM0552 NC_011001.1 610911 612038 D putative sigma-54 dependent transcriptional regulator 610911..612038 Burkholderia cenocepacia J2315 6928322 YP_002233177.1 CDS BCAM0553 NC_011001.1 612029 612808 R putative ABC transporter system permease complement(612029..612808) Burkholderia cenocepacia J2315 6928323 YP_002233178.1 CDS BCAM0554 NC_011001.1 612840 613658 R putative ABC transporter system permease complement(612840..613658) Burkholderia cenocepacia J2315 6928324 YP_002233179.1 CDS BCAM0555 NC_011001.1 613658 614764 R putative transport protein complement(613658..614764) Burkholderia cenocepacia J2315 6928325 YP_002233180.1 CDS BCAM0556 NC_011001.1 614796 615872 R hypothetical protein complement(614796..615872) Burkholderia cenocepacia J2315 6928326 YP_002233181.1 CDS BCAM0557 NC_011001.1 616313 617485 D putative monooxygenase 616313..617485 Burkholderia cenocepacia J2315 6928327 YP_002233182.1 CDS BCAM0558 NC_011001.1 617536 618582 D hypothetical protein 617536..618582 Burkholderia cenocepacia J2315 6928328 YP_002233183.1 CDS BCAM0559 NC_011001.1 618616 619431 D TonB family protein 618616..619431 Burkholderia cenocepacia J2315 6928329 YP_002233184.1 CDS BCAM0560 NC_011001.1 619473 620189 D transport protein 619473..620189 Burkholderia cenocepacia J2315 6928330 YP_002233185.1 CDS BCAM0561 NC_011001.1 620189 620599 D transport protein 620189..620599 Burkholderia cenocepacia J2315 6928331 YP_002233186.1 CDS BCAM0562 NC_011001.1 620635 621699 D hypothetical protein 620635..621699 Burkholderia cenocepacia J2315 6928332 YP_002233187.1 CDS BCAM0563 NC_011001.1 621696 622913 D major facilitator superfamily protein 621696..622913 Burkholderia cenocepacia J2315 6928333 YP_002233188.1 CDS BCAM0564 NC_011001.1 623060 625426 D TonB-dependent receptor 623060..625426 Burkholderia cenocepacia J2315 6928334 YP_002233189.1 CDS BCAM0565 NC_011001.1 625491 626510 R putative alcohol dehydrogenase complement(625491..626510) Burkholderia cenocepacia J2315 6928335 YP_002233190.1 CDS BCAM0566 NC_011001.1 626647 627576 D LysR family regulatory protein 626647..627576 Burkholderia cenocepacia J2315 6928336 YP_002233191.1 CDS BCAM0567 NC_011001.1 627747 629054 D major facilitator superfamily protein 627747..629054 Burkholderia cenocepacia J2315 6928337 YP_002233192.1 CDS BCAM0568 NC_011001.1 629216 629935 D short chain dehydrogenase 629216..629935 Burkholderia cenocepacia J2315 6928338 YP_002233193.1 CDS BCAM0569 NC_011001.1 630093 632042 D putative arylsulfatase 630093..632042 Burkholderia cenocepacia J2315 6928339 YP_002233194.1 CDS BCAM0570 NC_011001.1 632059 633108 D hypothetical protein 632059..633108 Burkholderia cenocepacia J2315 6928340 YP_002233195.1 CDS BCAM0571 NC_011001.1 633105 633917 D putative lipoprotein 633105..633917 Burkholderia cenocepacia J2315 6928341 YP_002233196.1 CDS BCAM0572 NC_011001.1 633911 634897 D hypothetical protein 633911..634897 Burkholderia cenocepacia J2315 6928342 YP_002233197.1 CDS BCAM0573 NC_011001.1 634961 635287 D hypothetical protein 634961..635287 Burkholderia cenocepacia J2315 6928343 YP_002233198.1 CDS BCAM0574 NC_011001.1 635298 636128 R hypothetical protein complement(635298..636128) Burkholderia cenocepacia J2315 6928344 YP_002233199.1 CDS BCAM0575 NC_011001.1 636283 637215 R LysR family regulatory protein complement(636283..637215) Burkholderia cenocepacia J2315 6928345 YP_002233200.1 CDS BCAM0576 NC_011001.1 637422 638195 D hypothetical protein 637422..638195 Burkholderia cenocepacia J2315 6928346 YP_002233201.1 CDS BCAM0577 NC_011001.1 638279 639577 D major facilitator superfamily protein 638279..639577 Burkholderia cenocepacia J2315 6928347 YP_002233202.1 CDS BCAM0578 NC_011001.1 639706 643344 D putative hydantoinase/oxoprolinase family protein 639706..643344 Burkholderia cenocepacia J2315 6928348 YP_002233203.1 CDS BCAM0580 NC_011001.1 643913 645916 D c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; RNase II stability modulator 643913..645916 Burkholderia cenocepacia J2315 6928349 YP_002233204.1 CDS BCAM0581 NC_011001.1 645965 646828 R regulator of pathogenicity factor RpfF; involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes; enoyl-CoA hydratase complement(645965..646828) Burkholderia cenocepacia J2315 6928350 YP_002233205.1 CDS BCAM0582 NC_011001.1 647520 649436 D hypothetical protein 647520..649436 Burkholderia cenocepacia J2315 6928351 YP_002233206.1 CDS BCAM0582A NC_011001.1 649505 649669 D hypothetical protein 649505..649669 Burkholderia cenocepacia J2315 6928352 YP_002233207.1 CDS BCAM0583 NC_011001.1 649700 650749 R AraC family regulatory protein complement(649700..650749) Burkholderia cenocepacia J2315 6928353 YP_002233208.1 CDS BCAM0584 NC_011001.1 650820 652022 D major facilitator superfamily protein 650820..652022 Burkholderia cenocepacia J2315 6928354 YP_002233209.1 CDS BCAM0585 NC_011001.1 652075 652953 R putative oxidoreductase complement(652075..652953) Burkholderia cenocepacia J2315 6928355 YP_002233210.1 CDS BCAM0586 NC_011001.1 653058 653957 D LysR family regulatory protein 653058..653957 Burkholderia cenocepacia J2315 6928356 YP_002233211.1 CDS BCAM0587 NC_011001.1 654197 654958 R hypothetical protein complement(654197..654958) Burkholderia cenocepacia J2315 6928357 YP_002233212.1 CDS BCAM0588 NC_011001.1 655108 655575 R MarR family regulatory protein complement(655108..655575) Burkholderia cenocepacia J2315 6928358 YP_002233213.1 CDS BCAM0589 NC_011001.1 655657 656025 D hypothetical protein 655657..656025 Burkholderia cenocepacia J2315 6928359 YP_002233214.1 CDS BCAM0590 NC_011001.1 656119 656736 D putative glutathione S-transferase 656119..656736 Burkholderia cenocepacia J2315 6928360 YP_002233215.1 CDS BCAM0591 NC_011001.1 656797 657519 R putative hydrolase complement(656797..657519) Burkholderia cenocepacia J2315 6928361 YP_002233216.1 CDS BCAM0592 NC_011001.1 657544 658515 R putative orthinine cyclodeaminase complement(657544..658515) Burkholderia cenocepacia J2315 6928362 YP_002233217.1 CDS BCAM0593 NC_011001.1 658625 659755 R putative alanine racemase complement(658625..659755) Burkholderia cenocepacia J2315 6928363 YP_002233218.1 CDS BCAM0594 NC_011001.1 659857 660783 R LysR family regulatory protein complement(659857..660783) Burkholderia cenocepacia J2315 6928364 YP_002233219.1 CDS BCAM0595 NC_011001.1 660972 661847 D LysR family regulatory protein 660972..661847 Burkholderia cenocepacia J2315 6928365 YP_002233220.1 CDS BCAM0596 NC_011001.1 662097 663239 D Similar to Bacillus subtilis GbsB alcohol dehydrogenase, UniProt:P71017 (EMBL:BSU47861) (402 aa) fasta scores: E()=2.3e-19, 33.555% id in 301 aa; similarity does not extend to C terminal 90 amino acids; putative alcohol dehydrogenase 662097..663239 Burkholderia cenocepacia J2315 6928366 YP_002233221.1 CDS BCAM0597 NC_011001.1 663255 664700 D major facilitator superfamily protein 663255..664700 Burkholderia cenocepacia J2315 6928367 YP_002233222.1 CDS BCAM0598 NC_011001.1 664720 665634 R putative reductase complement(664720..665634) Burkholderia cenocepacia J2315 6928368 YP_002233223.1 CDS BCAM0599 NC_011001.1 665776 666216 D putative transcriptional regulator 665776..666216 Burkholderia cenocepacia J2315 6928369 YP_002233224.1 CDS BCAM0600 NC_011001.1 666468 667058 D hypothetical protein 666468..667058 Burkholderia cenocepacia J2315 6928370 YP_002233225.1 CDS BCAM0601 NC_011001.1 667055 668896 D putative HSP70 protein 667055..668896 Burkholderia cenocepacia J2315 6928371 YP_002233226.1 CDS BCAM0602 NC_011001.1 668902 671658 D hypothetical protein 668902..671658 Burkholderia cenocepacia J2315 6928372 YP_002233227.1 CDS BCAM0603 NC_011001.1 671744 672748 R hypothetical protein complement(671744..672748) Burkholderia cenocepacia J2315 6928373 YP_002233228.1 CDS BCAM0604 NC_011001.1 672807 673886 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(672807..673886) Burkholderia cenocepacia J2315 6928374 YP_002233229.1 CDS BCAM0605 NC_011001.1 674181 674612 D AnsC family regulatory protein 674181..674612 Burkholderia cenocepacia J2315 6928375 YP_002233230.1 CDS BCAM0606 NC_011001.1 674649 675242 R carboxymuconolactone decarboxylase family protein complement(674649..675242) Burkholderia cenocepacia J2315 6928376 YP_002233231.1 CDS BCAM0607 NC_011001.1 675239 675766 R hypothetical protein complement(675239..675766) Burkholderia cenocepacia J2315 6928377 YP_002233232.1 CDS BCAM0608 NC_011001.1 675763 677223 R FAD dependent oxidoreductase complement(675763..677223) Burkholderia cenocepacia J2315 6928378 YP_002233233.1 CDS BCAM0609 NC_011001.1 677220 678233 R LysR family regulatory protein complement(677220..678233) Burkholderia cenocepacia J2315 6928379 YP_002233234.1 CDS BCAM0610 NC_011001.1 678631 679782 D putative ligand binding protein 678631..679782 Burkholderia cenocepacia J2315 6928380 YP_002233235.1 CDS BCAM0611 NC_011001.1 679819 681633 D putative branched-chain amino acid transporter 679819..681633 Burkholderia cenocepacia J2315 6928381 YP_002233236.1 CDS BCAM0612 NC_011001.1 681645 682502 D ABC transporter ATP-binding protein 681645..682502 Burkholderia cenocepacia J2315 6928382 YP_002233237.1 CDS BCAM0613 NC_011001.1 682532 683263 D ABC transporter ATP-binding protein 682532..683263 Burkholderia cenocepacia J2315 6928383 YP_002233238.1 CDS BCAM0614 NC_011001.1 683279 683842 R Similar to Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum) hypothetical protein. UniProt:Q6D9K2 (163 aa) fasta scores: E()=3.1e-19, 37.908% id in 153 aa; contains 30 amino acid C terminal extension; DinB family protein complement(683279..683842) Burkholderia cenocepacia J2315 6928384 YP_002233239.1 CDS BCAM0615 NC_011001.1 683910 684554 D TetR family regulatory protein 683910..684554 Burkholderia cenocepacia J2315 6928385 YP_002233240.1 CDS BCAM0616 NC_011001.1 684640 685089 D no significant database matches; hypothetical protein 684640..685089 Burkholderia cenocepacia J2315 6928386 YP_002233241.1 CDS BCAM0617 NC_011001.1 685146 686570 R two-component regulatory system sensor kinase complement(685146..686570) Burkholderia cenocepacia J2315 6928387 YP_002233242.1 CDS BCAM0618 NC_011001.1 686557 687222 R two-component regulatory system response regulator protein complement(686557..687222) Burkholderia cenocepacia J2315 6928388 YP_002233243.1 CDS BCAM0619 NC_011001.1 687423 688487 D hypothetical protein 687423..688487 Burkholderia cenocepacia J2315 6928389 YP_002233244.1 CDS BCAM0620 NC_011001.1 688613 689923 D major facilitator superfamily protein 688613..689923 Burkholderia cenocepacia J2315 6928390 YP_002233245.1 CDS BCAM0621 NC_011001.1 690031 690306 D hypothetical protein 690031..690306 Burkholderia cenocepacia J2315 6928391 YP_002233246.1 CDS BCAM0622 NC_011001.1 690639 692444 R two-component regulatory system sensor kinase complement(690639..692444) Burkholderia cenocepacia J2315 6928392 YP_002233247.1 CDS BCAM0623 NC_011001.1 692441 693088 R two-component regulatory system response regulator protein complement(692441..693088) Burkholderia cenocepacia J2315 6928393 YP_002233248.1 CDS BCAM0624 NC_011001.1 693414 693866 D hypothetical protein 693414..693866 Burkholderia cenocepacia J2315 6928394 YP_002233249.1 CDS BCAM0625 NC_011001.1 693975 695993 D putative DedA family protein 693975..695993 Burkholderia cenocepacia J2315 6928395 YP_002233250.1 CDS BCAM0626 NC_011001.1 696018 696347 R putative DNA-binding protein complement(696018..696347) Burkholderia cenocepacia J2315 6928396 YP_002233251.1 CDS BCAM0627 NC_011001.1 696344 696676 R hypothetical protein complement(696344..696676) Burkholderia cenocepacia J2315 6928397 YP_002233252.1 CDS BCAM0628 NC_011001.1 696964 697518 R putative low molecular weight phosphotyrosine protein phosphatase complement(696964..697518) Burkholderia cenocepacia J2315 6928398 YP_002233253.1 CDS BCAM0629 NC_011001.1 697702 700152 R putative hydrolase complement(697702..700152) Burkholderia cenocepacia J2315 6928399 YP_002233254.1 CDS BCAM0630 NC_011001.1 700139 701857 R Similar to Pseudomonas putida alkj alcohol dehydrogenase [acceptor]. UniProt:Q9WWW2 (EMBL:PPU233397) (552 aa) fasta scores: E()=4.6e-89, 47.159% id in 528 aa; homology does not extend to C terminal 40 amino acids; putative dehydrogenase complement(700139..701857) Burkholderia cenocepacia J2315 6928400 YP_002233255.1 CDS BCAM0631 NC_011001.1 702121 703152 D AraC family regulatory protein 702121..703152 Burkholderia cenocepacia J2315 6928401 YP_002233256.1 CDS BCAM0632 NC_011001.1 703217 703726 D putative acetyltransferase 703217..703726 Burkholderia cenocepacia J2315 6928402 YP_002233257.1 CDS BCAM0633 NC_011001.1 703744 704697 R hypothetical protein complement(703744..704697) Burkholderia cenocepacia J2315 6928403 YP_002233258.1 CDS BCAM0634 NC_011001.1 704756 704878 R hypothetical protein complement(704756..704878) Burkholderia cenocepacia J2315 6928404 YP_002233259.1 CDS BCAM0635 NC_011001.1 705293 705748 R AnsC family regulatory protein complement(705293..705748) Burkholderia cenocepacia J2315 6928405 YP_002233260.1 CDS BCAM0636 NC_011001.1 705864 706412 D alpha/beta hydrolase family protein 705864..706412 Burkholderia cenocepacia J2315 6928406 YP_002233261.1 CDS BCAM0637 NC_011001.1 706535 707788 D major facilitator superfamily protein 706535..707788 Burkholderia cenocepacia J2315 6928407 YP_002233262.1 CDS BCAM0638 NC_011001.1 707800 708345 R 4-hydroxyphenylacetate 3-monooxygenase reductase subunit complement(707800..708345) Burkholderia cenocepacia J2315 6928408 YP_002233263.1 CDS BCAM0639 NC_011001.1 708700 709332 D LuxR superfamily regulatory protein 708700..709332 Burkholderia cenocepacia J2315 6928409 YP_002233264.1 CDS BCAM0640 NC_011001.1 709345 710088 R putative short-chain dehydrogenase complement(709345..710088) Burkholderia cenocepacia J2315 6928410 YP_002233265.1 CDS BCAM0641 NC_011001.1 710148 711272 R putative amidase complement(710148..711272) Burkholderia cenocepacia J2315 6928411 YP_002233266.1 CDS BCAM0642 NC_011001.1 711304 711837 R hypothetical protein complement(711304..711837) Burkholderia cenocepacia J2315 6928412 YP_002233267.1 CDS BCAM0643 NC_011001.1 711834 712211 R hypothetical protein complement(711834..712211) Burkholderia cenocepacia J2315 6928413 YP_002233268.1 CDS BCAM0644 NC_011001.1 712314 713507 R putative acyl-CoA dehydrogenase complement(712314..713507) Burkholderia cenocepacia J2315 6928414 YP_002233269.1 CDS BCAM0645 NC_011001.1 713658 715211 D two-component regulatory system sensor kinase 713658..715211 Burkholderia cenocepacia J2315 6928415 YP_002233270.1 CDS BCAM0646 NC_011001.1 715256 715642 R putative tautomerase complement(715256..715642) Burkholderia cenocepacia J2315 6928416 YP_002233271.1 CDS BCAM0647 NC_011001.1 715823 716326 R putative ring-hydroxylating subunit beta complement(715823..716326) Burkholderia cenocepacia J2315 6928417 YP_002233272.1 CDS BCAM0648 NC_011001.1 716323 717606 R putative ring-hydroxylating subunit alpha complement(716323..717606) Burkholderia cenocepacia J2315 6928418 YP_002233273.1 CDS BCAM0649 NC_011001.1 717732 718664 D LysR family regulatory protein 717732..718664 Burkholderia cenocepacia J2315 6928419 YP_002233274.1 CDS BCAM0650 NC_011001.1 718791 719780 R putative oxidoreductase complement(718791..719780) Burkholderia cenocepacia J2315 6928420 YP_002233275.1 CDS BCAM0651 NC_011001.1 719937 721334 R major facilitator superfamily protein complement(719937..721334) Burkholderia cenocepacia J2315 6928421 YP_002233276.1 CDS BCAM0652 NC_011001.1 721753 722871 D putative gram-negative porin 721753..722871 Burkholderia cenocepacia J2315 6928422 YP_002233277.1 CDS BCAM0653 NC_011001.1 722898 723935 R LysR family regulatory protein complement(722898..723935) Burkholderia cenocepacia J2315 6928423 YP_002233278.1 CDS BCAM0654 NC_011001.1 723932 724900 R AraC family regulatory protein complement(723932..724900) Burkholderia cenocepacia J2315 6928424 YP_002233279.1 CDS BCAM0655 NC_011001.1 725050 726156 D putative octopine dehydrogenase 725050..726156 Burkholderia cenocepacia J2315 6928425 YP_002233280.1 CDS BCAM0656 NC_011001.1 726171 727163 D converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 726171..727163 Burkholderia cenocepacia J2315 6928426 YP_002233281.1 CDS BCAM0657 NC_011001.1 727175 728515 R Similar to Escherichia coli shia shikimate transporter. UniProt:P76350 (EMBL:ECD837) (438 aa) fasta scores: E()=9.9e-54, 39.192% id in 421 aa; homology does not cover N terminal 20 amino acids; major facilitator superfamily protein complement(727175..728515) Burkholderia cenocepacia J2315 6928427 YP_002233282.1 CDS BCAM0658 NC_011001.1 728633 729550 R LysR family regulatory protein complement(728633..729550) Burkholderia cenocepacia J2315 6928428 YP_002233283.1 CDS BCAM0659 NC_011001.1 729652 731205 D AMP-binding enzyme 729652..731205 Burkholderia cenocepacia J2315 6928429 YP_002233284.1 CDS BCAM0660 NC_011001.1 731217 732404 D putative acyl-CoA dehydrogenase 731217..732404 Burkholderia cenocepacia J2315 6928430 YP_002233285.1 CDS BCAM0661 NC_011001.1 732401 733543 D CoA-transferase family III protein 732401..733543 Burkholderia cenocepacia J2315 6928431 YP_002233286.1 CDS BCAM0662 NC_011001.1 733587 734885 D putative hexuronate transporter 733587..734885 Burkholderia cenocepacia J2315 6928432 YP_002233287.1 CDS BCAM0663 NC_011001.1 734994 736052 D putative porin 734994..736052 Burkholderia cenocepacia J2315 6928433 YP_002233288.1 CDS BCAM0664 NC_011001.1 736092 736493 D putative phospholipid-binding exported protein 736092..736493 Burkholderia cenocepacia J2315 6928434 YP_002233289.1 CDS BCAM0665 NC_011001.1 736541 737875 D family S12 serine peptidase; putative hydrolase 736541..737875 Burkholderia cenocepacia J2315 6928435 YP_002233290.1 CDS BCAM0666 NC_011001.1 737898 738947 R putative extracellular solute-binding protein complement(737898..738947) Burkholderia cenocepacia J2315 6928436 YP_002233291.1 CDS BCAM0667 NC_011001.1 739549 740700 R putative FAD dependent oxidoreductase complement(739549..740700) Burkholderia cenocepacia J2315 6928438 YP_002233292.1 CDS BCAM0668 NC_011001.1 740693 742135 R putative oxidoreductase complement(740693..742135) Burkholderia cenocepacia J2315 6928439 YP_002233293.1 CDS BCAM0669 NC_011001.1 742132 742479 R hypothetical protein complement(742132..742479) Burkholderia cenocepacia J2315 6928440 YP_002233294.1 CDS BCAM0670 NC_011001.1 742479 743273 R putative ABC transporter system permease complement(742479..743273) Burkholderia cenocepacia J2315 6928441 YP_002233295.1 CDS BCAM0671 NC_011001.1 743270 744187 R putative ABC transporter system permease complement(743270..744187) Burkholderia cenocepacia J2315 6928442 YP_002233296.1 CDS BCAM0672 NC_011001.1 744263 745345 R ABC transporter ATP-binding protein complement(744263..745345) Burkholderia cenocepacia J2315 6928443 YP_002233297.1 CDS BCAM0673 NC_011001.1 745639 746544 D IclR family regulatory protein 745639..746544 Burkholderia cenocepacia J2315 6928444 YP_002233298.1 CDS BCAM0674 NC_011001.1 746843 747589 D putative dehydrogenase 746843..747589 Burkholderia cenocepacia J2315 6928445 YP_002233299.1 CDS BCAM0675 NC_011001.1 747742 748596 D putative DJ-1/PfpI family protein 747742..748596 Burkholderia cenocepacia J2315 6928446 YP_002233300.1 CDS BCAM0676 NC_011001.1 748665 749138 D hypothetical protein 748665..749138 Burkholderia cenocepacia J2315 6928447 YP_002233301.1 CDS BCAM0677 NC_011001.1 749239 750189 R AraC family regulatory protein complement(749239..750189) Burkholderia cenocepacia J2315 6928448 YP_002233302.1 CDS BCAM0678 NC_011001.1 750347 750868 R putative acetyltransferase complement(750347..750868) Burkholderia cenocepacia J2315 6928449 YP_002233303.1 CDS BCAM0679 NC_011001.1 751228 751611 D hypothetical protein 751228..751611 Burkholderia cenocepacia J2315 6928450 YP_002233304.1 CDS BCAM0680 NC_011001.1 751783 752640 R putative DNA-binding protein complement(751783..752640) Burkholderia cenocepacia J2315 6928451 YP_002233305.1 CDS BCAM0681 NC_011001.1 752736 753629 D NAD dependent epimerase/dehydratase family protein 752736..753629 Burkholderia cenocepacia J2315 6928452 YP_002233306.1 CDS BCAM0682 NC_011001.1 753675 754664 R putative oxidoreductase complement(753675..754664) Burkholderia cenocepacia J2315 6928453 YP_002233307.1 CDS BCAM0683 NC_011001.1 754788 755690 R LysR family regulatory protein complement(754788..755690) Burkholderia cenocepacia J2315 6928454 YP_002233308.1 CDS BCAM0684 NC_011001.1 755770 757149 R Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase complement(755770..757149) Burkholderia cenocepacia J2315 6928455 YP_002233309.1 CDS BCAM0685 NC_011001.1 757319 757897 R hypothetical protein complement(757319..757897) Burkholderia cenocepacia J2315 6928456 YP_002233310.1 CDS BCAM0686 NC_011001.1 757945 758409 R putative acetyltransferase complement(757945..758409) Burkholderia cenocepacia J2315 6928457 YP_002233311.1 CDS BCAM0687 NC_011001.1 758559 759197 D putative threonine efflux pump 758559..759197 Burkholderia cenocepacia J2315 6928458 YP_002233312.1 CDS BCAM0688 NC_011001.1 759518 760315 D hypothetical protein 759518..760315 Burkholderia cenocepacia J2315 6928459 YP_002233313.1 CDS BCAM0689 NC_011001.1 760326 763373 D Internal region is similar to an internal region of Homo sapiens (Human) RRBP1 ribosome-binding protein 1 UniProt:Q9P2E9 (1410 aa) fasta scores: E()=0.0023, 23.055% id in 707 aa; hypothetical protein 760326..763373 Burkholderia cenocepacia J2315 6928460 YP_002233314.1 CDS BCAM0690 NC_011001.1 763377 764021 D hypothetical protein 763377..764021 Burkholderia cenocepacia J2315 6928461 YP_002233315.1 CDS BCAM0691 NC_011001.1 764018 764647 D hypothetical protein 764018..764647 Burkholderia cenocepacia J2315 6928462 YP_002233316.1 CDS BCAM0692 NC_011001.1 764681 765253 R putative NADPH-dependent FMN reductase complement(764681..765253) Burkholderia cenocepacia J2315 6928463 YP_002233317.1 CDS BCAM0693 NC_011001.1 765308 765925 R hypothetical protein complement(765308..765925) Burkholderia cenocepacia J2315 6928464 YP_002233318.1 CDS BCAM0694 NC_011001.1 766473 767756 R hypothetical protein complement(766473..767756) Burkholderia cenocepacia J2315 6928465 YP_002233319.1 CDS BCAM0695 NC_011001.1 767884 770160 R putative lipoprotein complement(767884..770160) Burkholderia cenocepacia J2315 6928466 YP_002233320.1 CDS BCAM0696 NC_011001.1 770523 770921 D putative carboxymuconolactone decarboxylase 770523..770921 Burkholderia cenocepacia J2315 6928467 YP_002233321.1 CDS BCAM0697 NC_011001.1 770994 771977 R family S33 serine peptidase; putative hydrolase complement(770994..771977) Burkholderia cenocepacia J2315 6928468 YP_002233322.1 CDS BCAM0698 NC_011001.1 771985 773568 R Similar to Caulobacter crescentus monooxygenase, flavin-binding family. UniProt:Q9A588 (498 aa) fasta scores: E()=5.2e-119, 61.245% id in 498 aa; contains 20 amino acid N terminal extension; FAD dependent oxidoreductase complement(771985..773568) Burkholderia cenocepacia J2315 6928469 YP_002233323.1 CDS BCAM0699 NC_011001.1 773565 774467 R putative exported dehydrogenase complement(773565..774467) Burkholderia cenocepacia J2315 6928470 YP_002233324.1 CDS BCAM0700 NC_011001.1 774571 775209 D TetR family regulatory protein 774571..775209 Burkholderia cenocepacia J2315 6928471 YP_002233325.1 CDS BCAM0701 NC_011001.1 775273 775740 D putative lipoprotein 775273..775740 Burkholderia cenocepacia J2315 6928472 YP_002233326.1 CDS BCAM0702 NC_011001.1 775756 776709 R LysR family regulatory protein complement(775756..776709) Burkholderia cenocepacia J2315 6928473 YP_002233327.1 CDS BCAM0703 NC_011001.1 776836 777480 D putative glutathione S-transferase 776836..777480 Burkholderia cenocepacia J2315 6928474 YP_002233328.1 CDS BCAM0704 NC_011001.1 777515 779578 D putative oxidoreductase 777515..779578 Burkholderia cenocepacia J2315 6928475 YP_002233329.1 CDS BCAM0705 NC_011001.1 779699 779902 D hypothetical protein 779699..779902 Burkholderia cenocepacia J2315 6928476 YP_002233330.1 CDS BCAM0707 NC_011001.1 782783 783415 D putative nicotinamide mononucleotide transporter 782783..783415 Burkholderia cenocepacia J2315 6928478 YP_002233331.1 CDS BCAM0708 NC_011001.1 783452 784642 D phosphotransferase enzyme family protein 783452..784642 Burkholderia cenocepacia J2315 6928479 YP_002233332.1 CDS BCAM0709 NC_011001.1 784806 785255 R hypothetical protein complement(784806..785255) Burkholderia cenocepacia J2315 6928480 YP_002233333.1 CDS BCAM0710 NC_011001.1 785271 785987 R family M35 metallo peptidase; family M35 metallopeptidase complement(785271..785987) Burkholderia cenocepacia J2315 6928481 YP_002233334.1 CDS czcC NC_011001.1 786289 787599 D putative cobalt-zinc-cadmium resistance protein 786289..787599 Burkholderia cenocepacia J2315 6928482 YP_002233335.1 CDS czcB NC_011001.1 787626 789095 D Similar to Alcaligenes eutrophus (Ralstonia eutropha) cobalt-zinc-cadmium resistance protein CzcB (cation efflux system protein czcb). UniProt:P13510 (EMBL:AECZCDRS) (520 aa) fasta scores: E()=8.5e-71, 51.131% id in 442 aa; homology does not extend to N terminus; cobalt-zinc-cadmium resistance protein 787626..789095 Burkholderia cenocepacia J2315 6930434 YP_002233336.1 CDS BCAM0713 NC_011001.1 789224 792436 D putative cobalt-zinc-cadmium resistance efflux system transporter protein 789224..792436 Burkholderia cenocepacia J2315 6930433 YP_002233337.1 CDS BCAM0714 NC_011001.1 792436 793119 D two-component regulatory system response regulator protein 792436..793119 Burkholderia cenocepacia J2315 6928483 YP_002233338.1 CDS BCAM0715 NC_011001.1 793116 794540 D two-component regulatory system sensor kinase 793116..794540 Burkholderia cenocepacia J2315 6928484 YP_002233339.1 CDS BCAM0716 NC_011001.1 794620 794907 R hypothetical protein complement(794620..794907) Burkholderia cenocepacia J2315 6928485 YP_002233340.1 CDS BCAM0717 NC_011001.1 795644 796804 R putative gram-negative porin complement(795644..796804) Burkholderia cenocepacia J2315 6928486 YP_002233341.1 CDS BCAM0718 NC_011001.1 797120 797395 D hypothetical protein 797120..797395 Burkholderia cenocepacia J2315 6928487 YP_002233342.1 CDS BCAM0719 NC_011001.1 797423 797926 D hypothetical protein 797423..797926 Burkholderia cenocepacia J2315 6928488 YP_002233343.1 CDS BCAM0720 NC_011001.1 797952 798674 R hypothetical protein complement(797952..798674) Burkholderia cenocepacia J2315 6928489 YP_002233344.1 CDS BCAM0721 NC_011001.1 798839 800134 R O-acetylhomoserine (thiol)-lyase complement(798839..800134) Burkholderia cenocepacia J2315 6928490 YP_002233345.1 CDS BCAM0722 NC_011001.1 800284 800955 D putative O-methyltransferase 800284..800955 Burkholderia cenocepacia J2315 6928491 YP_002233346.1 CDS BCAM0723 NC_011001.1 800992 802287 R hypothetical protein complement(800992..802287) Burkholderia cenocepacia J2315 6928492 YP_002233347.1 CDS BCAM0724 NC_011001.1 802350 803498 R hypothetical protein complement(802350..803498) Burkholderia cenocepacia J2315 6928493 YP_002233348.1 CDS BCAM0725 NC_011001.1 803757 804572 R hypothetical protein complement(803757..804572) Burkholderia cenocepacia J2315 6928494 YP_002233349.1 CDS BCAM0726 NC_011001.1 804628 805842 R hypothetical protein complement(804628..805842) Burkholderia cenocepacia J2315 6928495 YP_002233350.1 CDS BCAM0727 NC_011001.1 805919 807058 R hypothetical protein complement(805919..807058) Burkholderia cenocepacia J2315 6928496 YP_002233351.1 CDS BCAM0728 NC_011001.1 807726 809342 D transcriptional regulator 807726..809342 Burkholderia cenocepacia J2315 6930363 YP_002233352.1 CDS BCAM0729 NC_011001.1 809426 809965 D hypothetical protein 809426..809965 Burkholderia cenocepacia J2315 6928498 YP_002233353.1 CDS BCAM0730 NC_011001.1 809978 810574 R hypothetical protein complement(809978..810574) Burkholderia cenocepacia J2315 6928499 YP_002233354.1 CDS BCAM0731 NC_011001.1 810703 811245 D MarR family regulatory protein 810703..811245 Burkholderia cenocepacia J2315 6928500 YP_002233355.1 CDS BCAM0732 NC_011001.1 811265 812476 R cysteine desulfurase complement(811265..812476) Burkholderia cenocepacia J2315 6928501 YP_002233356.1 CDS BCAM0733 NC_011001.1 812731 813279 D putative oxidoreductase/monooxygenase 812731..813279 Burkholderia cenocepacia J2315 6928502 YP_002233357.1 CDS BCAM0734 NC_011001.1 813316 814794 D putative 4-hydroxyphenylacetate 3-hydroxylase 813316..814794 Burkholderia cenocepacia J2315 6928503 YP_002233358.1 CDS BCAM0735 NC_011001.1 814845 815231 D hypothetical protein 814845..815231 Burkholderia cenocepacia J2315 6928504 YP_002233359.1 CDS BCAM0736 NC_011001.1 815297 815986 D hypothetical protein 815297..815986 Burkholderia cenocepacia J2315 6928505 YP_002233360.1 CDS BCAM0737 NC_011001.1 816011 816763 R putative SAM-dependent methyltransferase complement(816011..816763) Burkholderia cenocepacia J2315 6928506 YP_002233361.1 CDS BCAM0738 NC_011001.1 816777 817403 R putative transporter-LysE family complement(816777..817403) Burkholderia cenocepacia J2315 6928507 YP_002233362.1 CDS BCAM0739 NC_011001.1 817568 818368 D AraC family regulatory protein 817568..818368 Burkholderia cenocepacia J2315 6928508 YP_002233363.1 CDS BCAM0740 NC_011001.1 818489 818908 D hypothetical protein 818489..818908 Burkholderia cenocepacia J2315 6928509 YP_002233364.1 CDS BCAM0741 NC_011001.1 819010 820011 D LysR family regulatory protein 819010..820011 Burkholderia cenocepacia J2315 6928510 YP_002233365.1 CDS BCAM0742 NC_011001.1 820213 821133 R LysR family regulatory protein complement(820213..821133) Burkholderia cenocepacia J2315 6928511 YP_002233366.1 CDS BCAM0743 NC_011001.1 821242 822324 D putative tartrate dehydrogenase 821242..822324 Burkholderia cenocepacia J2315 6928512 YP_002233367.1 CDS BCAM0744 NC_011001.1 822501 823811 D major facilitator superfamily protein 822501..823811 Burkholderia cenocepacia J2315 6928513 YP_002233368.1 CDS BCAM0745 NC_011001.1 823961 824458 R putative shikimate kinase complement(823961..824458) Burkholderia cenocepacia J2315 6928514 YP_002233369.1 CDS argG NC_011001.1 824676 826013 R catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase complement(824676..826013) Burkholderia cenocepacia J2315 6928515 YP_002233370.1 CDS BCAM0747 NC_011001.1 826331 827401 R hypothetical protein complement(826331..827401) Burkholderia cenocepacia J2315 6930350 YP_002233371.1 CDS BCAM0748 NC_011001.1 827565 829097 R putative diguanylate cyclase complement(827565..829097) Burkholderia cenocepacia J2315 6928516 YP_002233372.1 CDS lysP NC_011001.1 829682 831217 D lysine-specific permease 829682..831217 Burkholderia cenocepacia J2315 6928517 YP_002233373.1 CDS BCAM0750 NC_011001.1 831480 831725 D hypothetical protein 831480..831725 Burkholderia cenocepacia J2315 6930534 YP_002233374.1 CDS BCAM0751 NC_011001.1 831990 832907 D LysR family regulatory protein 831990..832907 Burkholderia cenocepacia J2315 6928518 YP_002233375.1 CDS BCAM0752 NC_011001.1 833017 833829 D family S33 serine peptidase; putative hydrolase 833017..833829 Burkholderia cenocepacia J2315 6928519 YP_002233376.1 CDS BCAM0753 NC_011001.1 833870 834223 R hypothetical protein complement(833870..834223) Burkholderia cenocepacia J2315 6928520 YP_002233377.1 CDS BCAM0754 NC_011001.1 834408 835028 R TetR family regulatory protein complement(834408..835028) Burkholderia cenocepacia J2315 6928521 YP_002233378.1 CDS BCAM0755 NC_011001.1 835123 836364 D putative glycosyltransferase 835123..836364 Burkholderia cenocepacia J2315 6928522 YP_002233379.1 CDS BCAM0756 NC_011001.1 836380 837075 R GntR family regulatory protein complement(836380..837075) Burkholderia cenocepacia J2315 6928523 YP_002233380.1 CDS BCAM0757 NC_011001.1 837258 838385 R putative porin complement(837258..838385) Burkholderia cenocepacia J2315 6928524 YP_002233381.1 CDS BCAM0758 NC_011001.1 838516 838830 R Similar to central section of Burkholderia pseudomallei (Pseudomonas pseudomallei) hypothetical protein. UniProt:Q63VD8 (EMBL:BX571965) (148 aa) fasta scores: E()=8.1e-12, 48.673% id in 113 aa; hypothetical protein complement(838516..838830) Burkholderia cenocepacia J2315 6928525 YP_002233382.1 CDS argT NC_011001.1 839356 840129 D periplasmic lysine-arginine-ornithine-binding protein 839356..840129 Burkholderia cenocepacia J2315 6928526 YP_002233383.1 CDS hisQ NC_011001.1 840303 840992 D histidine transport system permease 840303..840992 Burkholderia cenocepacia J2315 6930351 YP_002233384.1 CDS hisM NC_011001.1 840989 841702 D histidine transport system permease 840989..841702 Burkholderia cenocepacia J2315 6930497 YP_002233385.1 CDS hisP NC_011001.1 841736 842503 D histidine ABC transporter ATP-binding protein 841736..842503 Burkholderia cenocepacia J2315 6930495 YP_002233386.1 CDS BCAM0763 NC_011001.1 842581 844899 R putative carbohydrate-binding lipoprotein complement(842581..844899) Burkholderia cenocepacia J2315 6930496 YP_002233387.1 CDS BCAM0764 NC_011001.1 845279 846319 R Possible alternative upstream translational start sites; LacI family regulatory protein complement(845279..846319) Burkholderia cenocepacia J2315 6928527 YP_002233388.1 CDS BCAM0765 NC_011001.1 846621 847550 D aldose epimerase family protein 846621..847550 Burkholderia cenocepacia J2315 6928528 YP_002233389.1 CDS BCAM0766 NC_011001.1 847688 848713 D D-ribose-binding periplasmic protein precursor 847688..848713 Burkholderia cenocepacia J2315 6928529 YP_002233390.1 CDS BCAM0767 NC_011001.1 848783 850339 D ribose import ATP-binding protein 848783..850339 Burkholderia cenocepacia J2315 6928530 YP_002233391.1 CDS BCAM0768 NC_011001.1 850373 851350 D ribose transport system permease 850373..851350 Burkholderia cenocepacia J2315 6928531 YP_002233392.1 CDS BCAM0769 NC_011001.1 851352 852347 D ribose transport system permease 851352..852347 Burkholderia cenocepacia J2315 6928532 YP_002233393.1 CDS BCAM0770 NC_011001.1 852427 852861 D Similar to Bradyrhizobium japonicum bll5622 protein. UniProt:Q89IL2 (EMBL:BA000040) (175 aa) fasta scores: E()=1.1e-14, 41.463% id in 123 aa; contains 45 amino acid N terminus truncation; hypothetical protein 852427..852861 Burkholderia cenocepacia J2315 6928533 YP_002233394.1 CDS BCAM0771 NC_011001.1 852982 854007 D putative transposase 852982..854007 Burkholderia cenocepacia J2315 6928534 YP_002233395.1 CDS BCAM0772 NC_011001.1 854513 854650 D no significant database matches; hypothetical protein 854513..854650 Burkholderia cenocepacia J2315 6928535 YP_002233396.1 CDS BCAM0773 NC_011001.1 854713 855174 D hypothetical protein 854713..855174 Burkholderia cenocepacia J2315 6928536 YP_002233397.1 CDS BCAM0774 NC_011001.1 855282 856637 R poly[D-(-)-3-hydroxybutyrate] depolymerase complement(855282..856637) Burkholderia cenocepacia J2315 6928537 YP_002233398.1 CDS BCAM0775 NC_011001.1 856869 857588 D glutathione-S-tranferase family protein 856869..857588 Burkholderia cenocepacia J2315 6928538 YP_002233399.1 CDS BCAM0776 NC_011001.1 857830 859086 D putative cNMP-binding domain-containing protein 857830..859086 Burkholderia cenocepacia J2315 6928539 YP_002233400.1 CDS pomA NC_011001.1 859100 859864 D chemotaxis protein PomA 859100..859864 Burkholderia cenocepacia J2315 6928540 YP_002233401.1 CDS BCAM0778 NC_011001.1 859935 860606 D OmpA family protein 859935..860606 Burkholderia cenocepacia J2315 6930607 YP_002233402.1 CDS BCAM0779 NC_011001.1 860778 862640 D central section has homology to MCP2_SALTY P02941 Methyl-accepting chemotaxis protein; putative methyl-accepting chemotaxis protein 860778..862640 Burkholderia cenocepacia J2315 6928541 YP_002233403.1 CDS BCAM0780 NC_011001.1 862855 865791 R putative helicase complement(862855..865791) Burkholderia cenocepacia J2315 6928542 YP_002233404.1 CDS BCAM0781 NC_011001.1 866472 866897 D no significant database matches; hypothetical protein 866472..866897 Burkholderia cenocepacia J2315 6928543 YP_002233405.1 CDS BCAM0782 NC_011001.1 867098 868345 R putative prolidase complement(867098..868345) Burkholderia cenocepacia J2315 6928544 YP_002233406.1 CDS BCAM0783 NC_011001.1 868352 869668 R major facilitator superfamily protein complement(868352..869668) Burkholderia cenocepacia J2315 6928545 YP_002233407.1 CDS BCAM0784 NC_011001.1 869801 870748 R LysR family regulatory protein complement(869801..870748) Burkholderia cenocepacia J2315 6928546 YP_002233408.1 CDS BCAM0785 NC_011001.1 870747 871340 D Similar to Burkholderia pseudomallei (Pseudomonas pseudomallei) hypothetical protein. UniProt:Q63MP8 (EMBL:BX571966) (208 aa) fasta scores: E()=6e-41, 66.667% id in 144 aa; homology does not cover N terminal 50 amino acids; hypothetical protein 870747..871340 Burkholderia cenocepacia J2315 6928547 YP_002233409.1 CDS BCAM0786 NC_011001.1 871648 872019 R hypothetical protein complement(871648..872019) Burkholderia cenocepacia J2315 6928548 YP_002233410.1 CDS BCAM0790 NC_011001.1 872666 874108 R outer membrane efflux protein complement(872666..874108) Burkholderia cenocepacia J2315 6928550 YP_002233411.1 CDS BCAM0791 NC_011001.1 874127 875701 R major facilitator superfamily protein complement(874127..875701) Burkholderia cenocepacia J2315 6928551 YP_002233412.1 CDS BCAM0792 NC_011001.1 875715 876809 R efflux system transport protein complement(875715..876809) Burkholderia cenocepacia J2315 6928552 YP_002233413.1 CDS BCAM0793 NC_011001.1 876874 877305 R MarR family regulatory protein complement(876874..877305) Burkholderia cenocepacia J2315 6928553 YP_002233414.1 CDS BCAM0794 NC_011001.1 877415 878335 R LysR family regulatory protein complement(877415..878335) Burkholderia cenocepacia J2315 6928554 YP_002233415.1 CDS BCAM0795 NC_011001.1 878392 878856 D MarR family regulatory protein 878392..878856 Burkholderia cenocepacia J2315 6928555 YP_002233416.1 CDS BCAM0796 NC_011001.1 879059 880306 D hypothetical protein 879059..880306 Burkholderia cenocepacia J2315 6928556 YP_002233417.1 CDS BCAM0797 NC_011001.1 880299 880748 D hypothetical protein 880299..880748 Burkholderia cenocepacia J2315 6928557 YP_002233418.1 CDS BCAM0798 NC_011001.1 880762 881817 R AraC family regulatory protein complement(880762..881817) Burkholderia cenocepacia J2315 6928558 YP_002233419.1 CDS fadH NC_011001.1 881920 883953 D 2,4-dienoyl-CoA reductase 881920..883953 Burkholderia cenocepacia J2315 6928559 YP_002233420.1 CDS BCAM0800 NC_011001.1 884141 884545 R hypothetical protein complement(884141..884545) Burkholderia cenocepacia J2315 6930449 YP_002233421.1 CDS BCAM0801 NC_011001.1 884710 885603 R LysR family regulatory protein complement(884710..885603) Burkholderia cenocepacia J2315 6928560 YP_002233422.1 CDS BCAM0802 NC_011001.1 885690 886469 D Similar to Homo sapiens (Human) nqo2 ribosyldihydronicotinamide dehydrogenase [quinone], (nrh dehydrogenase [quinone] 2) (quinone reductase 2) (qr2) (nrh:quinone oxidoreductase 2). UniProt:P16083 (EMBL:AB050248) (230 aa) fasta scores: E()=4.2e-29, 40.000% id in 225 aa; homology does not extend to C terminus; putative NAD(P)H dehydrogenase 885690..886469 Burkholderia cenocepacia J2315 6928561 YP_002233423.1 CDS catC NC_011001.1 886650 886940 R muconolactone delta-isomerase complement(886650..886940) Burkholderia cenocepacia J2315 6928562 YP_002233424.1 CDS catA1 NC_011001.1 886984 887886 R catechol 1,2-dioxygenase 1 complement(886984..887886) Burkholderia cenocepacia J2315 6930406 YP_002233425.1 CDS catB1 NC_011001.1 887919 889052 R muconate cycloisomerase I 1 complement(887919..889052) Burkholderia cenocepacia J2315 6930404 YP_002233426.1 CDS BCAM0806 NC_011001.1 889144 890034 D putative cat operon regulatory protein 889144..890034 Burkholderia cenocepacia J2315 6930405 YP_002233427.1 CDS BCAM0807 NC_011001.1 890200 891876 D putative methyl-accepting chemotaxis protein 890200..891876 Burkholderia cenocepacia J2315 6928563 YP_002233428.1 CDS BCAM0808 NC_011001.1 891921 892232 D no significant database matches; hypothetical protein 891921..892232 Burkholderia cenocepacia J2315 6928564 YP_002233429.1 CDS BCAM0809 NC_011001.1 892389 893348 R AraC family regulatory protein complement(892389..893348) Burkholderia cenocepacia J2315 6928565 YP_002233430.1 CDS BCAM0810 NC_011001.1 893561 894832 D putative aromatic oxygenase 893561..894832 Burkholderia cenocepacia J2315 6928566 YP_002233431.1 CDS BCAM0811 NC_011001.1 894848 895324 D putative aromatic oxygenase 894848..895324 Burkholderia cenocepacia J2315 6928567 YP_002233432.1 CDS BCAM0812 NC_011001.1 895360 895686 D putative aromatic hydrocarbons catabolism dioxygenase 895360..895686 Burkholderia cenocepacia J2315 6928568 YP_002233433.1 CDS BCAM0813 NC_011001.1 895676 896896 D putative aromatic hydrocarbons catabolism reductase 895676..896896 Burkholderia cenocepacia J2315 6928569 YP_002233434.1 CDS BCAM0814 NC_011001.1 896993 898279 D hypothetical protein 896993..898279 Burkholderia cenocepacia J2315 6928570 YP_002233435.1 CDS BCAM0815 NC_011001.1 898328 898627 R putative DNA binding protein complement(898328..898627) Burkholderia cenocepacia J2315 6928571 YP_002233436.1 CDS BCAM0816 NC_011001.1 898631 898957 R hypothetical protein complement(898631..898957) Burkholderia cenocepacia J2315 6928572 YP_002233437.1 CDS BCAM0817 NC_011001.1 899325 900965 D catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase 899325..900965 Burkholderia cenocepacia J2315 6928573 YP_002233438.1 CDS BCAM0818 NC_011001.1 900994 902427 D putative aldehyde dehydrogenase 900994..902427 Burkholderia cenocepacia J2315 6928574 YP_002233439.1 CDS BCAM0819 NC_011001.1 902670 904253 D putative Na+/H+ antiporter 902670..904253 Burkholderia cenocepacia J2315 6928575 YP_002233440.1 CDS BCAM0820 NC_011001.1 904770 905861 D hybrid two-component system kinase-response regulator protein 904770..905861 Burkholderia cenocepacia J2315 6928576 YP_002233441.1 CDS BCAM0821 NC_011001.1 905986 907662 D putative methyl-accepting chemotaxis protein 905986..907662 Burkholderia cenocepacia J2315 6928577 YP_002233442.1 CDS BCAM0822 NC_011001.1 907659 908180 D putative chemotaxis-related protein 907659..908180 Burkholderia cenocepacia J2315 6928578 YP_002233443.1 CDS BCAM0823 NC_011001.1 908177 909598 D putative chemotaxis-related methyltranferase 908177..909598 Burkholderia cenocepacia J2315 6928579 YP_002233444.1 CDS BCAM0824 NC_011001.1 909645 910352 D putative chemotaxis-related protein 909645..910352 Burkholderia cenocepacia J2315 6928580 YP_002233445.1 CDS BCAM0825 NC_011001.1 910349 912658 D putative chemotaxis-related two component response regulator/histidine kinase 910349..912658 Burkholderia cenocepacia J2315 6928581 YP_002233446.1 CDS cheB2 NC_011001.1 912655 913674 D regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 912655..913674 Burkholderia cenocepacia J2315 6928582 YP_002233447.1 CDS BCAM0827 NC_011001.1 913772 915178 D putative voltage gated chloride channel membrane protein 913772..915178 Burkholderia cenocepacia J2315 6930421 YP_002233448.1 CDS BCAM0828 NC_011001.1 915267 915851 D no significant database matches; hypothetical protein 915267..915851 Burkholderia cenocepacia J2315 6928583 YP_002233449.1 CDS BCAM0829 NC_011001.1 915870 916583 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(915870..916583) Burkholderia cenocepacia J2315 6928584 YP_002233450.1 CDS BCAM0829a NC_011001.1 916708 917280 R putative acetyltransferase complement(916708..917280) Burkholderia cenocepacia J2315 6928585 YP_002233451.1 CDS BCAM0831 NC_011001.1 917376 919238 R ABC transporter ATP-binding membrane protein complement(917376..919238) Burkholderia cenocepacia J2315 6928586 YP_002233452.1 CDS BCAM0832 NC_011001.1 919721 920602 D putative Dyd-type peroxidase family protein 919721..920602 Burkholderia cenocepacia J2315 6928587 YP_002233453.1 CDS BCAM0833 NC_011001.1 920700 921101 R putative OsmC-like protein complement(920700..921101) Burkholderia cenocepacia J2315 6928588 YP_002233454.1 CDS BCAM0834 NC_011001.1 921200 922123 R LysR family regulatory protein complement(921200..922123) Burkholderia cenocepacia J2315 6928589 YP_002233455.1 CDS BCAM0835 NC_011001.1 922566 923696 D AraC family regulatory protein 922566..923696 Burkholderia cenocepacia J2315 6928590 YP_002233456.1 CDS BCAM0836 NC_011001.1 923645 924961 D manganese transport protein MntH 923645..924961 Burkholderia cenocepacia J2315 6928591 YP_002233457.1 CDS BCAM0837 NC_011001.1 925042 925632 D hypothetical protein 925042..925632 Burkholderia cenocepacia J2315 6928592 YP_002233458.1 CDS BCAM0838 NC_011001.1 925642 925878 D no significant database matches; hypothetical protein 925642..925878 Burkholderia cenocepacia J2315 6928593 YP_002233459.1 CDS BCAM0839 NC_011001.1 926113 926901 D short chain dehydrogenase 926113..926901 Burkholderia cenocepacia J2315 6928594 YP_002233460.1 CDS BCAM0840 NC_011001.1 926939 927955 D putative zinc-binding oxidoreductase 926939..927955 Burkholderia cenocepacia J2315 6928595 YP_002233461.1 CDS BCAM0841 NC_011001.1 928152 928670 D hypothetical protein 928152..928670 Burkholderia cenocepacia J2315 6928596 YP_002233462.1 CDS BCAM0842 NC_011001.1 928717 929769 R hypothetical protein complement(928717..929769) Burkholderia cenocepacia J2315 6928597 YP_002233463.1 CDS BCAM0843 NC_011001.1 930005 930589 R putative lipoprotein complement(930005..930589) Burkholderia cenocepacia J2315 6928598 YP_002233464.1 CDS BCAM0844 NC_011001.1 930654 931040 R hypothetical protein complement(930654..931040) Burkholderia cenocepacia J2315 6928599 YP_002233465.1 CDS BCAM0845 NC_011001.1 931338 933194 R putative endonuclease/exonuclease/phosphatase family protein complement(931338..933194) Burkholderia cenocepacia J2315 6928600 YP_002233466.1 CDS BCAM0846 NC_011001.1 933401 933754 D hypothetical protein 933401..933754 Burkholderia cenocepacia J2315 6928601 YP_002233467.1 CDS BCAM0847 NC_011001.1 933880 934299 D hypothetical protein 933880..934299 Burkholderia cenocepacia J2315 6928602 YP_002233468.1 CDS BCAM0848 NC_011001.1 934325 934741 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 934325..934741 Burkholderia cenocepacia J2315 6928603 YP_002233469.1 CDS BCAM0849 NC_011001.1 934738 936006 D putative RNA polymerase sigma factor 934738..936006 Burkholderia cenocepacia J2315 6928604 YP_002233470.1 CDS BCAM0850 NC_011001.1 936235 936657 D Similar to N terminus of Porphyromonas gingivalis (Bacteroides gingivalis) rbr rubrerythrin (rr). UniProt:Q9AGG3 (EMBL:AE017172) (200 aa) fasta scores: E()=3.4e-16, 46.099% id in 141 aa; putative rubyerythrin 936235..936657 Burkholderia cenocepacia J2315 6928605 YP_002233471.1 CDS BCAM0851 NC_011001.1 936781 938118 D hypothetical protein 936781..938118 Burkholderia cenocepacia J2315 6928606 YP_002233472.1 CDS BCAM0852 NC_011001.1 938148 938729 D hypothetical protein 938148..938729 Burkholderia cenocepacia J2315 6928607 YP_002233473.1 CDS BCAM0853 NC_011001.1 939465 940406 D hypothetical protein 939465..940406 Burkholderia cenocepacia J2315 6928608 YP_002233474.1 CDS bceA NC_011001.1 940538 942079 R bifunctional exopolysaccharide biosynthesis protein (phosphomannose isomerase and GDP-D-mannose pyrophosphorylase) complement(940538..942079) Burkholderia cenocepacia J2315 6928609 YP_002233475.1 CDS bceC NC_011001.1 943948 945360 D UDP-glucose dehydrogenase 943948..945360 Burkholderia cenocepacia J2315 6930371 YP_002233476.1 CDS bceD NC_011001.1 945391 945834 D low molecular weight protein-tyrosine-phosphatase 945391..945834 Burkholderia cenocepacia J2315 6930372 YP_002233477.1 CDS bceE NC_011001.1 945828 947006 D putative polysaccharide biosynthesis/export lipoprotein 945828..947006 Burkholderia cenocepacia J2315 6930373 YP_002233478.1 CDS bceF NC_011001.1 947057 949282 D tyrosine-protein kinase 947057..949282 Burkholderia cenocepacia J2315 6930374 YP_002233479.1 CDS bceG NC_011001.1 949345 950304 D glycosyltransferase 949345..950304 Burkholderia cenocepacia J2315 6930375 YP_002233480.1 CDS bceH NC_011001.1 950348 951493 D putative glycosyltransferase 950348..951493 Burkholderia cenocepacia J2315 6930376 YP_002233481.1 CDS bceI NC_011001.1 951504 952970 D putative polymerase 951504..952970 Burkholderia cenocepacia J2315 6930377 YP_002233482.1 CDS bceJ NC_011001.1 952967 954151 D putative glycosyltransferase 952967..954151 Burkholderia cenocepacia J2315 6930378 YP_002233483.1 CDS bceK NC_011001.1 954151 955317 D glycosyltransferase 954151..955317 Burkholderia cenocepacia J2315 6930379 YP_002233484.1 CDS bceL NC_011001.1 955451 956686 R major facilitator superfamily protein complement(955451..956686) Burkholderia cenocepacia J2315 6930380 YP_002233485.1 CDS BCAM0866 NC_011001.1 956841 957311 D MarR family regulatory protein 956841..957311 Burkholderia cenocepacia J2315 6930381 YP_002233486.1 CDS BCAM0867 NC_011001.1 957393 958901 R major facilitator superfamily protein complement(957393..958901) Burkholderia cenocepacia J2315 6928610 YP_002233487.1 CDS BCAM0868 NC_011001.1 959028 959801 R AraC family regulatory protein complement(959028..959801) Burkholderia cenocepacia J2315 6928611 YP_002233488.1 CDS fbp NC_011001.1 959828 960169 R peptidyl-prolyl cis-trans isomerase complement(959828..960169) Burkholderia cenocepacia J2315 6928612 YP_002233489.1 CDS BCAM0870 NC_011001.1 960751 961668 D hypothetical protein 960751..961668 Burkholderia cenocepacia J2315 6930450 YP_002233490.1 CDS BCAM0871 NC_011001.1 962167 963603 D Similar to Escherichia coli zrar transcriptional regulatory protein zrar. UniProt:P14375 (EMBL:ECHYDHGA) (441 aa) fasta scores: E()=7.8e-48, 40.618% id in 421 aa; putative transcriptional regulator 962167..963603 Burkholderia cenocepacia J2315 6928613 YP_002233491.1 CDS BCAM0872 NC_011001.1 963632 964015 R GtrA family membrane protein complement(963632..964015) Burkholderia cenocepacia J2315 6928614 YP_002233492.1 CDS BCAM0874 NC_011001.1 965078 965860 R periplasmic solute-binding protein complement(965078..965860) Burkholderia cenocepacia J2315 6928615 YP_002233493.1 CDS BCAM0875 NC_011001.1 966096 966515 D hypothetical protein 966096..966515 Burkholderia cenocepacia J2315 6928616 YP_002233494.1 CDS BCAM0876 NC_011001.1 966578 967213 D hypothetical protein 966578..967213 Burkholderia cenocepacia J2315 6928617 YP_002233495.1 CDS BCAM0877 NC_011001.1 967248 967979 R putative serine/threonine protein phosphatase complement(967248..967979) Burkholderia cenocepacia J2315 6928618 YP_002233496.1 CDS BCAM0878 NC_011001.1 968113 968766 D hypothetical protein 968113..968766 Burkholderia cenocepacia J2315 6928619 YP_002233497.1 CDS BCAM0879 NC_011001.1 968773 969441 R putative glutathione S-transferase complement(968773..969441) Burkholderia cenocepacia J2315 6928620 YP_002233498.1 CDS BCAM0880 NC_011001.1 969539 970246 R putative methyltransferase complement(969539..970246) Burkholderia cenocepacia J2315 6928621 YP_002233499.1 CDS BCAM0881 NC_011001.1 970562 972217 D putative alpha amylase-family protein 970562..972217 Burkholderia cenocepacia J2315 6928622 YP_002233500.1 CDS BCAM0882 NC_011001.1 972287 972883 R hypothetical protein complement(972287..972883) Burkholderia cenocepacia J2315 6928623 YP_002233501.1 CDS BCAM0883 NC_011001.1 972894 974237 R putative ion transporter complement(972894..974237) Burkholderia cenocepacia J2315 6928624 YP_002233502.1 CDS BCAM0884 NC_011001.1 974314 975093 R two-component regulatory system sensor kinase complement(974314..975093) Burkholderia cenocepacia J2315 6928625 YP_002233503.1 CDS BCAM0885 NC_011001.1 975161 976084 R hypothetical protein complement(975161..976084) Burkholderia cenocepacia J2315 6928626 YP_002233504.1 CDS BCAM0886 NC_011001.1 976122 976979 R LysR family regulatory protein complement(976122..976979) Burkholderia cenocepacia J2315 6928627 YP_002233505.1 CDS BCAM0887 NC_011001.1 977093 977476 D putative tautomerase 977093..977476 Burkholderia cenocepacia J2315 6928628 YP_002233506.1 CDS BCAM0888 NC_011001.1 977616 979241 D Similar to Burkholderia pseudomallei (Pseudomonas pseudomallei) hypothetical protein. UniProt:Q63JC8 (EMBL:BX571966) (685 aa) fasta scores: E()=9e-80, 51.643% id in 639 aa; contains 45 amino acid N terminal truncation; hypothetical protein 977616..979241 Burkholderia cenocepacia J2315 6928629 YP_002233507.1 CDS modE NC_011001.1 979292 980131 D putative molybdenum transport protein 979292..980131 Burkholderia cenocepacia J2315 6928630 YP_002233508.1 CDS BCAM0890 NC_011001.1 980306 981007 R ABC transporter ATP-binding protein complement(980306..981007) Burkholderia cenocepacia J2315 6930556 YP_002233509.1 CDS BCAM0891 NC_011001.1 981072 981749 R putative molybdenum transport system permease complement(981072..981749) Burkholderia cenocepacia J2315 6928631 YP_002233510.1 CDS BCAM0892 NC_011001.1 981760 982554 R putative molybdate-binding periplasmic protein precursor complement(981760..982554) Burkholderia cenocepacia J2315 6928632 YP_002233511.1 CDS BCAM0893 NC_011001.1 982692 983390 R PAP2 superfamily protein complement(982692..983390) Burkholderia cenocepacia J2315 6928633 YP_002233512.1 CDS BCAM0894 NC_011001.1 983690 984754 D poly(3-hydroxyalkanoate) depolymerase C precursor 983690..984754 Burkholderia cenocepacia J2315 6928634 YP_002233513.1 CDS BCAM0895 NC_011001.1 984835 985011 D hypothetical protein 984835..985011 Burkholderia cenocepacia J2315 6928635 YP_002233514.1 CDS BCAM0896 NC_011001.1 985121 985540 R putative organic hydroperoxide resistance protein complement(985121..985540) Burkholderia cenocepacia J2315 6928636 YP_002233515.1 CDS BCAM0897 NC_011001.1 985695 986147 R MarR family regulatory protein complement(985695..986147) Burkholderia cenocepacia J2315 6928637 YP_002233516.1 CDS BCAM0898 NC_011001.1 986336 987145 R hypothetical protein complement(986336..987145) Burkholderia cenocepacia J2315 6928638 YP_002233517.1 CDS BCAM0899 NC_011001.1 987136 988134 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase complement(987136..988134) Burkholderia cenocepacia J2315 6928639 YP_002233518.1 CDS BCAM0900 NC_011001.1 988232 988627 R hypothetical protein complement(988232..988627) Burkholderia cenocepacia J2315 6928640 YP_002233519.1 CDS BCAM0901 NC_011001.1 988757 990283 D Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 988757..990283 Burkholderia cenocepacia J2315 6928641 YP_002233520.1 CDS BCAM0902 NC_011001.1 990398 990688 R hypothetical protein complement(990398..990688) Burkholderia cenocepacia J2315 6928642 YP_002233521.1 CDS BCAM0903 NC_011001.1 991070 991813 R lysine decarboxylase family protein complement(991070..991813) Burkholderia cenocepacia J2315 6928643 YP_002233522.1 CDS polA NC_011001.1 991830 994583 D has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 991830..994583 Burkholderia cenocepacia J2315 6928644 YP_002233523.1 CDS ndh NC_011001.1 994862 996196 D putative NADH dehydrogenase 994862..996196 Burkholderia cenocepacia J2315 6930606 YP_002233524.1 CDS BCAM0906 NC_011001.1 996500 997375 D putative dienelactone hydrolase family protein 996500..997375 Burkholderia cenocepacia J2315 6930566 YP_002233525.1 CDS BCAM0907 NC_011001.1 997430 998299 R putative sulfurtransferase complement(997430..998299) Burkholderia cenocepacia J2315 6928645 YP_002233526.1 CDS BCAM0908 NC_011001.1 998417 999523 R putative iron-sulfur protein complement(998417..999523) Burkholderia cenocepacia J2315 6928646 YP_002233527.1 CDS BCAM0909 NC_011001.1 999794 1000087 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 999794..1000087 Burkholderia cenocepacia J2315 6928647 YP_002233528.1 CDS BCAM0910 NC_011001.1 1000084 1000968 D putative geranyltranstransferase 1000084..1000968 Burkholderia cenocepacia J2315 6928648 YP_002233529.1 CDS dxs NC_011001.1 1001050 1002954 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1001050..1002954 Burkholderia cenocepacia J2315 6928649 YP_002233530.1 CDS BCAM0912 NC_011001.1 1003109 1003918 D similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase 1003109..1003918 Burkholderia cenocepacia J2315 6930444 YP_002233531.1 CDS gcp NC_011001.1 1004007 1005047 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(1004007..1005047) Burkholderia cenocepacia J2315 6928650 YP_002233532.1 CDS BCAM0914 NC_011001.1 1005178 1006398 D hypothetical protein 1005178..1006398 Burkholderia cenocepacia J2315 6930468 YP_002233533.1 CDS rpsU NC_011001.1 1006505 1006717 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1006505..1006717 Burkholderia cenocepacia J2315 6928651 YP_002233534.1 CDS BCAM0916 NC_011001.1 1006912 1007358 D hypothetical protein 1006912..1007358 Burkholderia cenocepacia J2315 6930627 YP_002233535.1 CDS dnaG NC_011001.1 1007429 1009306 D synthesizes RNA primers at the replication forks; DNA primase 1007429..1009306 Burkholderia cenocepacia J2315 6928652 YP_002233536.1 CDS BCAM0918 NC_011001.1 1009947 1011812 D RNA polymerase sigma factor RpoD 1009947..1011812 Burkholderia cenocepacia J2315 6928653 YP_002233537.1 CDS BCAM0919 NC_011001.1 1012344 1013891 D putative phospholipase D 1012344..1013891 Burkholderia cenocepacia J2315 6930364 YP_002233538.1 CDS BCAM0920 NC_011001.1 1013899 1015365 R putative aminotransferase complement(1013899..1015365) Burkholderia cenocepacia J2315 6928655 YP_002233539.1 CDS BCAM0921 NC_011001.1 1015599 1016249 D hypothetical protein 1015599..1016249 Burkholderia cenocepacia J2315 6928656 YP_002233540.1 CDS BCAM0922 NC_011001.1 1016398 1018230 R family S53 serine peptidase; serine-carboxyl peptidase complement(1016398..1018230) Burkholderia cenocepacia J2315 6928657 YP_002233541.1 CDS BCAM0923 NC_011001.1 1018859 1019482 R putative lipoprotein complement(1018859..1019482) Burkholderia cenocepacia J2315 6928658 YP_002233542.1 CDS BCAM0924 NC_011001.1 1019479 1020198 R two-component regulatory system response regulator protein complement(1019479..1020198) Burkholderia cenocepacia J2315 6928659 YP_002233543.1 CDS BCAM0925 NC_011001.1 1020273 1021703 R multidrug efflux system outer membrane protein complement(1020273..1021703) Burkholderia cenocepacia J2315 6928660 YP_002233544.1 CDS adeB NC_011001.1 1021708 1024851 R multidrug efflux system transporter protein complement(1021708..1024851) Burkholderia cenocepacia J2315 6928661 YP_002233545.1 CDS adeA NC_011001.1 1024872 1026032 R multidrug efflux system transport protein complement(1024872..1026032) Burkholderia cenocepacia J2315 6930332 YP_002233546.1 CDS neo NC_011001.1 1026269 1027063 D aminoglycoside 3'-phosphotransferase 1026269..1027063 Burkholderia cenocepacia J2315 6930331 YP_002233547.1 CDS BCAM0929 NC_011001.1 1027182 1027652 R hypothetical protein complement(1027182..1027652) Burkholderia cenocepacia J2315 6930567 YP_002233548.1 CDS BCAM0930 NC_011001.1 1027734 1028345 R putative ankyrin-like protein complement(1027734..1028345) Burkholderia cenocepacia J2315 6928662 YP_002233549.1 CDS BCAM0931 NC_011001.1 1028424 1029959 R catalase precursor complement(1028424..1029959) Burkholderia cenocepacia J2315 6928663 YP_002233550.1 CDS BCAM0932 NC_011001.1 1030195 1031682 R outer membrane efflux protein complement(1030195..1031682) Burkholderia cenocepacia J2315 6928664 YP_002233551.1 CDS BCAM0933 NC_011001.1 1031696 1033282 R major facilitator superfamily protein complement(1031696..1033282) Burkholderia cenocepacia J2315 6928665 YP_002233552.1 CDS BCAM0934 NC_011001.1 1033275 1034399 R efflux system transport protein complement(1033275..1034399) Burkholderia cenocepacia J2315 6928666 YP_002233553.1 CDS BCAM0935 NC_011001.1 1034491 1035324 D TetR family regulatory protein 1034491..1035324 Burkholderia cenocepacia J2315 6928667 YP_002233554.1 CDS BCAM0936 NC_011001.1 1035358 1037817 R putative MscS mechanosensitive ion channel precursor complement(1035358..1037817) Burkholderia cenocepacia J2315 6928668 YP_002233555.1 CDS BCAM0937 NC_011001.1 1038153 1039112 R putative monooxygenase complement(1038153..1039112) Burkholderia cenocepacia J2315 6928669 YP_002233556.1 CDS BCAM0938 NC_011001.1 1039212 1039943 R GNAT family acetyltransferase complement(1039212..1039943) Burkholderia cenocepacia J2315 6928670 YP_002233557.1 CDS BCAM0939 NC_011001.1 1040965 1041858 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 1040965..1041858 Burkholderia cenocepacia J2315 6928671 YP_002233558.1 CDS BCAM0940A NC_011001.1 1041855 1042496 D putative methyltransferase 1041855..1042496 Burkholderia cenocepacia J2315 6928672 YP_002233559.1 CDS gnd NC_011001.1 1042594 1044006 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1042594..1044006 Burkholderia cenocepacia J2315 6928673 YP_002233560.1 CDS BCAM0942 NC_011001.1 1044174 1044551 D hypothetical protein 1044174..1044551 Burkholderia cenocepacia J2315 6930484 YP_002233561.1 CDS BCAM0943 NC_011001.1 1044667 1044987 R hypothetical protein complement(1044667..1044987) Burkholderia cenocepacia J2315 6928674 YP_002233562.1 CDS BCAM0944 NC_011001.1 1045412 1046146 D putative lipoprotein 1045412..1046146 Burkholderia cenocepacia J2315 6928675 YP_002233563.1 CDS BCAM0945 NC_011001.1 1046204 1046842 R hypothetical protein complement(1046204..1046842) Burkholderia cenocepacia J2315 6928676 YP_002233564.1 CDS BCAM0946 NC_011001.1 1047069 1047605 D putative cytochrome b561 1047069..1047605 Burkholderia cenocepacia J2315 6928677 YP_002233565.1 CDS BCAM0946a NC_011001.1 1047761 1048129 D hypothetical protein 1047761..1048129 Burkholderia cenocepacia J2315 6928678 YP_002233566.1 CDS BCAM0948 NC_011001.1 1048279 1050345 D TonB-dependent receptor 1048279..1050345 Burkholderia cenocepacia J2315 6928679 YP_002233567.1 CDS lipA NC_011001.1 1050567 1051661 D exported lipase LipA 1050567..1051661 Burkholderia cenocepacia J2315 6928680 YP_002233568.1 CDS lipB NC_011001.1 1051665 1052699 D acts as a molecular chaperone to fold and export lipase A; lipase chaperone 1051665..1052699 Burkholderia cenocepacia J2315 6930527 YP_002233569.1 CDS BCAM0951 NC_011001.1 1052727 1054250 R GntR family regulatory protein complement(1052727..1054250) Burkholderia cenocepacia J2315 6930528 YP_002233570.1 CDS BCAM0952 NC_011001.1 1054358 1055461 D ABC transporter ATP-binding protein 1054358..1055461 Burkholderia cenocepacia J2315 6928681 YP_002233571.1 CDS BCAM0953 NC_011001.1 1055538 1056584 D extracellular solute-binding protein 1055538..1056584 Burkholderia cenocepacia J2315 6928682 YP_002233572.1 CDS BCAM0954 NC_011001.1 1056696 1057952 D binding-protein-dependent transport system protein 1056696..1057952 Burkholderia cenocepacia J2315 6928683 YP_002233573.1 CDS BCAM0955 NC_011001.1 1057990 1058826 D binding-protein-dependent transport system protein 1057990..1058826 Burkholderia cenocepacia J2315 6928684 YP_002233574.1 CDS BCAM0956 NC_011001.1 1059083 1060501 D major facilitator superfamily protein 1059083..1060501 Burkholderia cenocepacia J2315 6928685 YP_002233575.1 CDS BCAM0957 NC_011001.1 1060565 1062298 R family S53 serine peptidase; putative pepstatin-insensitive carboxyl proteinase complement(1060565..1062298) Burkholderia cenocepacia J2315 6928686 YP_002233576.1 CDS BCAM0958 NC_011001.1 1062946 1063269 D ArsR family regulatory protein 1062946..1063269 Burkholderia cenocepacia J2315 6928687 YP_002233577.1 CDS BCAM0959 NC_011001.1 1063266 1063703 D hypothetical protein 1063266..1063703 Burkholderia cenocepacia J2315 6928688 YP_002233578.1 CDS BCAM0960 NC_011001.1 1063700 1064140 D hypothetical protein 1063700..1064140 Burkholderia cenocepacia J2315 6928689 YP_002233579.1 CDS acnA NC_011001.1 1064317 1067034 R catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(1064317..1067034) Burkholderia cenocepacia J2315 6928690 YP_002233580.1 CDS prpD NC_011001.1 1067087 1068538 R functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase complement(1067087..1068538) Burkholderia cenocepacia J2315 6930423 YP_002233581.1 CDS BCAM0963 NC_011001.1 1068566 1069078 R hypothetical protein complement(1068566..1069078) Burkholderia cenocepacia J2315 6930617 YP_002233582.1 CDS BCAM0964 NC_011001.1 1069309 1070310 R putative lyase complement(1069309..1070310) Burkholderia cenocepacia J2315 6928691 YP_002233583.1 CDS mdh NC_011001.1 1070502 1071488 R catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase complement(1070502..1071488) Burkholderia cenocepacia J2315 6928692 YP_002233584.1 CDS BCAM0966 NC_011001.1 1071777 1072601 D GntR family regulatory protein 1071777..1072601 Burkholderia cenocepacia J2315 6930540 YP_002233585.1 CDS BCAM0967 NC_011001.1 1072771 1073187 D putative succinate dehydrogenase cytochrome b556 subunit 1072771..1073187 Burkholderia cenocepacia J2315 6928693 YP_002233586.1 CDS BCAM0968 NC_011001.1 1073192 1073560 D putative succinate dehydrogenase hydrophobic membrane anchor protein 1073192..1073560 Burkholderia cenocepacia J2315 6928694 YP_002233587.1 CDS sdhA NC_011001.1 1073564 1075339 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1073564..1075339 Burkholderia cenocepacia J2315 6928695 YP_002233588.1 CDS sdhB NC_011001.1 1075361 1076062 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1075361..1076062 Burkholderia cenocepacia J2315 6930631 YP_002233589.1 CDS BCAM0971 NC_011001.1 1076070 1076339 D hypothetical protein 1076070..1076339 Burkholderia cenocepacia J2315 6930632 YP_002233590.1 CDS gltA NC_011001.1 1076406 1077707 D type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 1076406..1077707 Burkholderia cenocepacia J2315 6928696 YP_002233591.1 CDS BCAM0973 NC_011001.1 1077798 1078775 R AraC family regulatory protein complement(1077798..1078775) Burkholderia cenocepacia J2315 6930482 YP_002233592.1 CDS BCAM0974 NC_011001.1 1078848 1079237 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1078848..1079237 Burkholderia cenocepacia J2315 6928697 YP_002233593.1 CDS BCAM0975 NC_011001.1 1079348 1080598 D hypothetical protein 1079348..1080598 Burkholderia cenocepacia J2315 6928698 YP_002233594.1 CDS BCAM0976 NC_011001.1 1080809 1081567 D putative amidinotransferase 1080809..1081567 Burkholderia cenocepacia J2315 6928699 YP_002233595.1 CDS BCAM0977 NC_011001.1 1081666 1082130 D AnsC family regulatory protein 1081666..1082130 Burkholderia cenocepacia J2315 6928700 YP_002233596.1 CDS lysP NC_011001.1 1082234 1083766 D lysine-specific permease 1082234..1083766 Burkholderia cenocepacia J2315 6928701 YP_002233597.1 CDS BCAM0979 NC_011001.1 1084103 1084828 R putative glutathione-S-transferase complement(1084103..1084828) Burkholderia cenocepacia J2315 6930533 YP_002233598.1 CDS BCAM0980 NC_011001.1 1084950 1085273 R hypothetical protein complement(1084950..1085273) Burkholderia cenocepacia J2315 6928702 YP_002233599.1 CDS BCAM0981 NC_011001.1 1085621 1086442 D hypothetical protein 1085621..1086442 Burkholderia cenocepacia J2315 6928703 YP_002233600.1 CDS BCAM0982 NC_011001.1 1086478 1087236 D hypothetical protein 1086478..1087236 Burkholderia cenocepacia J2315 6928704 YP_002233601.1 CDS leuC1 NC_011001.1 1087444 1088853 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 1087444..1088853 Burkholderia cenocepacia J2315 6928705 YP_002233602.1 CDS BCAM0983A NC_011001.1 1088857 1089003 D putative entericidin B-like bacteriolytic toxin 1088857..1089003 Burkholderia cenocepacia J2315 6930525 YP_002233603.1 CDS leuD NC_011001.1 1089071 1089721 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 1089071..1089721 Burkholderia cenocepacia J2315 6928706 YP_002233604.1 CDS leuB NC_011001.1 1089797 1090864 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1089797..1090864 Burkholderia cenocepacia J2315 6930526 YP_002233605.1 CDS asd NC_011001.1 1091187 1092308 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1091187..1092308 Burkholderia cenocepacia J2315 6930524 YP_002233606.1 CDS flgE NC_011001.1 1092405 1093649 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(1092405..1093649) Burkholderia cenocepacia J2315 6930358 YP_002233607.1 CDS BCAM0988 NC_011001.1 1094463 1096577 D hypothetical protein 1094463..1096577 Burkholderia cenocepacia J2315 6930459 YP_002233608.1 CDS truA NC_011001.1 1096574 1097389 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1096574..1097389 Burkholderia cenocepacia J2315 6928707 YP_002233609.1 CDS trpF NC_011001.1 1097386 1098087 D catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 1097386..1098087 Burkholderia cenocepacia J2315 6930654 YP_002233610.1 CDS trpB NC_011001.1 1098142 1099335 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1098142..1099335 Burkholderia cenocepacia J2315 6930653 YP_002233611.1 CDS BCAM0992 NC_011001.1 1099345 1100196 D putative DNA methylase 1099345..1100196 Burkholderia cenocepacia J2315 6930651 YP_002233612.1 CDS trpA NC_011001.1 1100292 1101107 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1100292..1101107 Burkholderia cenocepacia J2315 6928708 YP_002233613.1 CDS accD NC_011001.1 1101170 1102042 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 1101170..1102042 Burkholderia cenocepacia J2315 6930650 YP_002233614.1 CDS folC NC_011001.1 1102143 1103453 D putative bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1102143..1103453 Burkholderia cenocepacia J2315 6930326 YP_002233615.1 CDS BCAM0996 NC_011001.1 1103561 1104319 D putative peptidoglycan-binding membrane protein 1103561..1104319 Burkholderia cenocepacia J2315 6930461 YP_002233616.1 CDS BCAM0997 NC_011001.1 1104327 1104821 D colicin V production protein 1104327..1104821 Burkholderia cenocepacia J2315 6928709 YP_002233617.1 CDS purF NC_011001.1 1104873 1106405 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1104873..1106405 Burkholderia cenocepacia J2315 6928710 YP_002233618.1 CDS metZ NC_011001.1 1106665 1107855 D catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase 1106665..1107855 Burkholderia cenocepacia J2315 6930619 YP_002233619.1 CDS BCAM1001 NC_011001.1 1108532 1109566 R putative transposase complement(1108532..1109566) Burkholderia cenocepacia J2315 6930544 YP_002233620.1 CDS BCAM1002 NC_011001.1 1109737 1111104 D putative reverse transcriptase-Group II intron 1109737..1111104 Burkholderia cenocepacia J2315 6928711 YP_002233621.1 CDS BCAM1003 NC_011001.1 1111224 1112189 R putative epimerase complement(1111224..1112189) Burkholderia cenocepacia J2315 6928712 YP_002233622.1 CDS gca NC_011001.1 1112176 1113222 R GCP-mannose 4,6-dehydratase complement(1112176..1113222) Burkholderia cenocepacia J2315 6928713 YP_002233623.1 CDS BCAM1005 NC_011001.1 1113258 1114322 R putative acyltransferase complement(1113258..1114322) Burkholderia cenocepacia J2315 6930467 YP_002233624.1 CDS BCAM1006 NC_011001.1 1114766 1116982 D hypothetical protein 1114766..1116982 Burkholderia cenocepacia J2315 6928714 YP_002233625.1 CDS BCAM1007 NC_011001.1 1117023 1118489 D putative polysaccharide biosynthesis protein 1117023..1118489 Burkholderia cenocepacia J2315 6928715 YP_002233626.1 CDS BCAM1008 NC_011001.1 1118486 1120954 D glycosyltransferase 1118486..1120954 Burkholderia cenocepacia J2315 6928716 YP_002233627.1 CDS BCAM1009 NC_011001.1 1121337 1122512 R putative acyltransferase complement(1121337..1122512) Burkholderia cenocepacia J2315 6928717 YP_002233628.1 CDS gtaB NC_011001.1 1123104 1123991 D putative UTP-glucose-1-phosphate uridylyltransferase 1123104..1123991 Burkholderia cenocepacia J2315 6928718 YP_002233629.1 CDS BCAM1011 NC_011001.1 1124364 1125482 R putative acetyltransferase complement(1124364..1125482) Burkholderia cenocepacia J2315 6930487 YP_002233630.1 CDS BCAM1012 NC_011001.1 1125749 1126198 D putative histone-like protein 1125749..1126198 Burkholderia cenocepacia J2315 6928719 YP_002233631.1 CDS BCAM1013a NC_011001.1 1126467 1127258 D streptomycin 3'-adenyltransferase; aminoglycoside resistance protein 1126467..1127258 Burkholderia cenocepacia J2315 6928720 YP_002233632.1 CDS BCAM1014 NC_011001.1 1127407 1127880 R putative 3-demethylubiquinone-9 3-methyltransferase complement(1127407..1127880) Burkholderia cenocepacia J2315 6928721 YP_002233633.1 CDS BCAM1015 NC_011001.1 1128272 1129432 R putative porin complement(1128272..1129432) Burkholderia cenocepacia J2315 6928722 YP_002233634.1 CDS BCAM1016 NC_011001.1 1129848 1130801 R putative ribonuclease complement(1129848..1130801) Burkholderia cenocepacia J2315 6928723 YP_002233635.1 CDS fdnG NC_011001.1 1130945 1134016 D This CDS contains an in-frame opal codon, UGA, at position 197. This opal codon encodes selenocysteine, which forms the active-site of the protein; formate dehydrogenase major subunit join(1130945..1131532,1131536..1134016) Burkholderia cenocepacia J2315 6928724 YP_002233636.1 CDS fdnH NC_011001.1 1134027 1134941 D formate dehydrogenase iron-sulfur subunit 1134027..1134941 Burkholderia cenocepacia J2315 6930453 YP_002233637.1 CDS fdnI NC_011001.1 1134938 1135564 D formate dehydrogenase cytochrome b556 (FDN) subunit 1134938..1135564 Burkholderia cenocepacia J2315 6930454 YP_002233638.1 CDS BCAM1021 NC_011001.1 1135659 1136609 D possibly involved in the formation of formate dehydrogenase; FdhE-like protein 1135659..1136609 Burkholderia cenocepacia J2315 6930455 YP_002233639.1 CDS selA NC_011001.1 1136683 1138122 D catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 1136683..1138122 Burkholderia cenocepacia J2315 6928725 YP_002233640.1 CDS selB NC_011001.1 1138119 1140044 D putative selenocysteine-specific elongation factor 1138119..1140044 Burkholderia cenocepacia J2315 6930633 YP_002233641.1 CDS BCAM1024 NC_011001.1 1140270 1141259 R putative phage integrase complement(1140270..1141259) Burkholderia cenocepacia J2315 6930365 YP_002233642.1 CDS BCAM1026 NC_011001.1 1141475 1141807 R putative phage DNA-binding protein complement(1141475..1141807) Burkholderia cenocepacia J2315 6928726 YP_002233643.1 CDS BCAM1027 NC_011001.1 1141804 1142325 R hypothetical protein complement(1141804..1142325) Burkholderia cenocepacia J2315 6928727 YP_002233644.1 CDS BCAM1028 NC_011001.1 1142322 1142789 R hypothetical protein complement(1142322..1142789) Burkholderia cenocepacia J2315 6928728 YP_002233645.1 CDS BCAM1029 NC_011001.1 1142806 1143129 R hypothetical protein complement(1142806..1143129) Burkholderia cenocepacia J2315 6928729 YP_002233646.1 CDS BCAM1030 NC_011001.1 1143126 1143410 R hypothetical protein complement(1143126..1143410) Burkholderia cenocepacia J2315 6928730 YP_002233647.1 CDS BCAM1031 NC_011001.1 1143407 1143712 R hypothetical protein complement(1143407..1143712) Burkholderia cenocepacia J2315 6928731 YP_002233648.1 CDS BCAM1032 NC_011001.1 1143709 1143951 R putative phage DNA-binding protein complement(1143709..1143951) Burkholderia cenocepacia J2315 6928732 YP_002233649.1 CDS BCAM1033 NC_011001.1 1143948 1144337 R hypothetical protein complement(1143948..1144337) Burkholderia cenocepacia J2315 6928733 YP_002233650.1 CDS BCAM1034 NC_011001.1 1144327 1144620 R hypothetical protein complement(1144327..1144620) Burkholderia cenocepacia J2315 6928734 YP_002233651.1 CDS BCAM1035 NC_011001.1 1144613 1145524 R hypothetical protein complement(1144613..1145524) Burkholderia cenocepacia J2315 6928735 YP_002233652.1 CDS BCAM1036 NC_011001.1 1145508 1146017 R phage methyltransferase complement(1145508..1146017) Burkholderia cenocepacia J2315 6928736 YP_002233653.1 CDS BCAM1038 NC_011001.1 1146164 1146769 R hypothetical protein complement(1146164..1146769) Burkholderia cenocepacia J2315 6928737 YP_002233654.1 CDS BCAM1039 NC_011001.1 1146895 1147575 R hypothetical protein complement(1146895..1147575) Burkholderia cenocepacia J2315 6928738 YP_002233655.1 CDS BCAM1040 NC_011001.1 1147568 1148425 R hypothetical protein complement(1147568..1148425) Burkholderia cenocepacia J2315 6928739 YP_002233656.1 CDS BCAM1041 NC_011001.1 1148473 1149786 R putative phage coiled coil domain-containing protein complement(1148473..1149786) Burkholderia cenocepacia J2315 6928740 YP_002233657.1 CDS BCAM1042 NC_011001.1 1149783 1149950 R putative phage membrane protein complement(1149783..1149950) Burkholderia cenocepacia J2315 6928741 YP_002233658.1 CDS BCAM1043 NC_011001.1 1149947 1150105 R putative phage membrane protein complement(1149947..1150105) Burkholderia cenocepacia J2315 6928742 YP_002233659.1 CDS BCAM1044 NC_011001.1 1150105 1150425 R hypothetical protein complement(1150105..1150425) Burkholderia cenocepacia J2315 6928743 YP_002233660.1 CDS BCAM1045 NC_011001.1 1150422 1150811 R hypothetical protein complement(1150422..1150811) Burkholderia cenocepacia J2315 6928744 YP_002233661.1 CDS BCAM1046 NC_011001.1 1150860 1151132 R hypothetical protein complement(1150860..1151132) Burkholderia cenocepacia J2315 6928745 YP_002233662.1 CDS BCAM1047 NC_011001.1 1151161 1151316 R hypothetical protein complement(1151161..1151316) Burkholderia cenocepacia J2315 6928746 YP_002233663.1 CDS BCAM1048 NC_011001.1 1151303 1151386 R hypothetical protein complement(1151303..1151386) Burkholderia cenocepacia J2315 6928747 YP_002233664.1 CDS BCAM1049 NC_011001.1 1151388 1151534 R hypothetical protein complement(1151388..1151534) Burkholderia cenocepacia J2315 6928748 YP_002233665.1 CDS BCAM1050 NC_011001.1 1151536 1151826 R hypothetical protein complement(1151536..1151826) Burkholderia cenocepacia J2315 6928749 YP_002233666.1 CDS BCAM1051 NC_011001.1 1152484 1152867 R putative phage death-on-curing protein complement(1152484..1152867) Burkholderia cenocepacia J2315 6928750 YP_002233667.1 CDS BCAM1052 NC_011001.1 1152868 1153044 R hypothetical protein complement(1152868..1153044) Burkholderia cenocepacia J2315 6928751 YP_002233668.1 CDS BCAM1053 NC_011001.1 1153138 1154670 R putative reverse transcriptase-Group II intron complement(1153138..1154670) Burkholderia cenocepacia J2315 6930325 YP_002233669.1 CDS BCAM1052A NC_011001.1 1155079 1155369 D hypothetical protein 1155079..1155369 Burkholderia cenocepacia J2315 6928754 YP_002233670.1 CDS BCAM1053a NC_011001.1 1155356 1155760 R putative phage DNA-binding protein complement(1155356..1155760) Burkholderia cenocepacia J2315 6928753 YP_002233671.1 CDS BCAM1053B NC_011001.1 1155838 1156092 D hypothetical protein 1155838..1156092 Burkholderia cenocepacia J2315 6928755 YP_002233672.1 CDS BCAM1053C NC_011001.1 1156296 1156538 R hypothetical protein complement(1156296..1156538) Burkholderia cenocepacia J2315 6928756 YP_002233673.1 CDS BCAM1054 NC_011001.1 1156691 1156966 D putative phage DNA-binding protein 1156691..1156966 Burkholderia cenocepacia J2315 6928757 YP_002233674.1 CDS BCAM1055 NC_011001.1 1156951 1157880 D hypothetical protein 1156951..1157880 Burkholderia cenocepacia J2315 6928758 YP_002233675.1 CDS BCAM1056 NC_011001.1 1157858 1158469 D hypothetical protein 1157858..1158469 Burkholderia cenocepacia J2315 6928759 YP_002233676.1 CDS BCAM1057 NC_011001.1 1158466 1158936 D putative phage endodeoxyribonuclease RusA 1158466..1158936 Burkholderia cenocepacia J2315 6928760 YP_002233677.1 CDS BCAM1058 NC_011001.1 1158947 1159276 D putative phage DNA-binding protein 1158947..1159276 Burkholderia cenocepacia J2315 6928761 YP_002233678.1 CDS BCAM1059 NC_011001.1 1159273 1159866 D putative phage DNA binding protein 1159273..1159866 Burkholderia cenocepacia J2315 6928762 YP_002233679.1 CDS BCAM1061 NC_011001.1 1159975 1160154 D hypothetical protein 1159975..1160154 Burkholderia cenocepacia J2315 6928763 YP_002233680.1 CDS BCAM1062 NC_011001.1 1160235 1160549 D hypothetical protein 1160235..1160549 Burkholderia cenocepacia J2315 6928764 YP_002233681.1 CDS BCAM1063 NC_011001.1 1160500 1162047 D hypothetical protein 1160500..1162047 Burkholderia cenocepacia J2315 6928765 YP_002233682.1 CDS BCAM1064 NC_011001.1 1162044 1163627 D hypothetical protein 1162044..1163627 Burkholderia cenocepacia J2315 6928766 YP_002233683.1 CDS BCAM1065 NC_011001.1 1163458 1164207 D putative phage head protein 1163458..1164207 Burkholderia cenocepacia J2315 6928767 YP_002233684.1 CDS BCAM1066 NC_011001.1 1164209 1165525 D hypothetical protein 1164209..1165525 Burkholderia cenocepacia J2315 6928768 YP_002233685.1 CDS BCAM1067 NC_011001.1 1165538 1166026 D hypothetical protein 1165538..1166026 Burkholderia cenocepacia J2315 6928769 YP_002233686.1 CDS BCAM1068 NC_011001.1 1166037 1167074 D putative exported phage protein 1166037..1167074 Burkholderia cenocepacia J2315 6928770 YP_002233687.1 CDS BCAM1069 NC_011001.1 1167084 1167509 D hypothetical protein 1167084..1167509 Burkholderia cenocepacia J2315 6928771 YP_002233688.1 CDS BCAM1070 NC_011001.1 1167565 1167948 D hypothetical protein 1167565..1167948 Burkholderia cenocepacia J2315 6928772 YP_002233689.1 CDS BCAM1071 NC_011001.1 1167977 1168459 D hypothetical protein 1167977..1168459 Burkholderia cenocepacia J2315 6928773 YP_002233690.1 CDS BCAM1072 NC_011001.1 1168463 1168834 D hypothetical protein 1168463..1168834 Burkholderia cenocepacia J2315 6928774 YP_002233691.1 CDS BCAM1073 NC_011001.1 1168839 1169429 D hypothetical protein 1168839..1169429 Burkholderia cenocepacia J2315 6928775 YP_002233692.1 CDS BCAM1074 NC_011001.1 1169439 1171250 D putative exported phage protein 1169439..1171250 Burkholderia cenocepacia J2315 6928776 YP_002233693.1 CDS BCAM1075 NC_011001.1 1171268 1171708 D hypothetical protein 1171268..1171708 Burkholderia cenocepacia J2315 6928777 YP_002233694.1 CDS BCAM1076 NC_011001.1 1171711 1172163 D hypothetical protein 1171711..1172163 Burkholderia cenocepacia J2315 6928778 YP_002233695.1 CDS BCAM1077 NC_011001.1 1172160 1172345 D hypothetical protein 1172160..1172345 Burkholderia cenocepacia J2315 6928779 YP_002233696.1 CDS BCAM1078 NC_011001.1 1172338 1174125 D putative phage glucosaminidase 1172338..1174125 Burkholderia cenocepacia J2315 6928780 YP_002233697.1 CDS BCAM1079 NC_011001.1 1174122 1174727 D hypothetical protein 1174122..1174727 Burkholderia cenocepacia J2315 6928781 YP_002233698.1 CDS BCAM1080 NC_011001.1 1174727 1175041 D hypothetical protein 1174727..1175041 Burkholderia cenocepacia J2315 6928782 YP_002233699.1 CDS BCAM1081 NC_011001.1 1175055 1175537 D hypothetical protein 1175055..1175537 Burkholderia cenocepacia J2315 6928783 YP_002233700.1 CDS BCAM1082 NC_011001.1 1175674 1176684 D hypothetical protein 1175674..1176684 Burkholderia cenocepacia J2315 6928784 YP_002233701.1 CDS BCAM1082A NC_011001.1 1176681 1177094 R putative exported phage protein complement(1176681..1177094) Burkholderia cenocepacia J2315 6928785 YP_002233702.1 CDS BCAM1083 NC_011001.1 1177108 1177899 D putative transmembrane phage protein 1177108..1177899 Burkholderia cenocepacia J2315 6928786 YP_002233703.1 CDS BCAM1084 NC_011001.1 1177907 1178257 D hypothetical protein 1177907..1178257 Burkholderia cenocepacia J2315 6928787 YP_002233704.1 CDS BCAM1085 NC_011001.1 1178254 1179441 D hypothetical protein 1178254..1179441 Burkholderia cenocepacia J2315 6928788 YP_002233705.1 CDS BCAM1086 NC_011001.1 1179443 1180159 D hypothetical protein 1179443..1180159 Burkholderia cenocepacia J2315 6928789 YP_002233706.1 CDS BCAM1087 NC_011001.1 1180216 1181214 D putative exported phage protein 1180216..1181214 Burkholderia cenocepacia J2315 6928790 YP_002233707.1 CDS BCAM1088 NC_011001.1 1181230 1181808 D hypothetical protein 1181230..1181808 Burkholderia cenocepacia J2315 6928791 YP_002233708.1 CDS BCAM1089 NC_011001.1 1181826 1183382 D putative exported phage protein 1181826..1183382 Burkholderia cenocepacia J2315 6928792 YP_002233709.1 CDS BCAM1090 NC_011001.1 1183386 1183778 D putative phage lipoprotein 1183386..1183778 Burkholderia cenocepacia J2315 6928793 YP_002233710.1 CDS BCAM1091 NC_011001.1 1183840 1184226 D putative phage transmembrane protein 1183840..1184226 Burkholderia cenocepacia J2315 6928794 YP_002233711.1 CDS BCAM1092 NC_011001.1 1184229 1184795 D putative phage lysozyme 1184229..1184795 Burkholderia cenocepacia J2315 6928795 YP_002233712.1 CDS BCAM1093 NC_011001.1 1184865 1185497 D hypothetical protein 1184865..1185497 Burkholderia cenocepacia J2315 6928796 YP_002233713.1 CDS BCAM1094 NC_011001.1 1185501 1185704 D hypothetical protein 1185501..1185704 Burkholderia cenocepacia J2315 6928797 YP_002233714.1 CDS BCAM1095 NC_011001.1 1185747 1186187 D putative phage lipoprotein 1185747..1186187 Burkholderia cenocepacia J2315 6928798 YP_002233715.1 CDS BCAM1096 NC_011001.1 1186184 1186780 D putative phage class 3 lipase 1186184..1186780 Burkholderia cenocepacia J2315 6928799 YP_002233716.1 CDS BCAM1097 NC_011001.1 1187163 1187396 D hypothetical protein 1187163..1187396 Burkholderia cenocepacia J2315 6928800 YP_002233717.1 CDS BCAM1098 NC_011001.1 1187474 1187899 R NUDIX hydrolase complement(1187474..1187899) Burkholderia cenocepacia J2315 6928801 YP_002233718.1 CDS BCAM1099 NC_011001.1 1188031 1189320 R putative permease complement(1188031..1189320) Burkholderia cenocepacia J2315 6928802 YP_002233719.1 CDS BCAM1100 NC_011001.1 1189534 1190511 R LysR family regulatory protein complement(1189534..1190511) Burkholderia cenocepacia J2315 6928803 YP_002233720.1 CDS BCAM1101 NC_011001.1 1190644 1191363 D putative exported short chain dehydrogenase 1190644..1191363 Burkholderia cenocepacia J2315 6928804 YP_002233721.1 CDS BCAM1104 NC_011001.1 1193064 1194605 D putative glycerol kinase 1193064..1194605 Burkholderia cenocepacia J2315 6928806 YP_002233722.1 CDS BCAM1105 NC_011001.1 1194627 1196303 D putative glycerol-3-phosphate dehydrogenase 1194627..1196303 Burkholderia cenocepacia J2315 6928807 YP_002233723.1 CDS BCAM1106 NC_011001.1 1196300 1197862 D putative oxidoreductase 1196300..1197862 Burkholderia cenocepacia J2315 6928808 YP_002233724.1 CDS BCAM1107 NC_011001.1 1197868 1198443 D putative glycerol uptake operon antiterminator regulatory protein 1197868..1198443 Burkholderia cenocepacia J2315 6928809 YP_002233725.1 CDS BCAM1108 NC_011001.1 1198472 1198807 D putative monooxygenase 1198472..1198807 Burkholderia cenocepacia J2315 6928810 YP_002233726.1 CDS BCAM1109 NC_011001.1 1198804 1199961 D putative alcohol dehydrogenase 1198804..1199961 Burkholderia cenocepacia J2315 6928811 YP_002233727.1 CDS BCAM1110 NC_011001.1 1199997 1201160 R major facilitator superfamily protein complement(1199997..1201160) Burkholderia cenocepacia J2315 6928812 YP_002233728.1 CDS speF NC_011001.1 1201382 1203562 R ornithine decarboxylase complement(1201382..1203562) Burkholderia cenocepacia J2315 6928813 YP_002233729.1 CDS adiA NC_011001.1 1204104 1206368 D biodegradative arginine decarboxylase 1204104..1206368 Burkholderia cenocepacia J2315 6930645 YP_002233730.1 CDS potE NC_011001.1 1206430 1207815 D catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter 1206430..1207815 Burkholderia cenocepacia J2315 6930336 YP_002233731.1 CDS BCAM1114 NC_011001.1 1207835 1208743 R LysR family regulatory protein complement(1207835..1208743) Burkholderia cenocepacia J2315 6930608 YP_002233732.1 CDS BCAM1115 NC_011001.1 1209252 1213442 D Contains many Hep_Hag repeats and haemagglutinin motifs; putative haemagglutinin-related autotransporter protein 1209252..1213442 Burkholderia cenocepacia J2315 6928814 YP_002233733.1 CDS BCAM1116 NC_011001.1 1213487 1213912 D SmpA/OmlA family lipoprotein 1213487..1213912 Burkholderia cenocepacia J2315 6928815 YP_002233734.1 CDS BCAM1117 NC_011001.1 1214014 1214598 D hypothetical protein 1214014..1214598 Burkholderia cenocepacia J2315 6928816 YP_002233735.1 CDS BCAM1118 NC_011001.1 1214603 1215595 R hypothetical protein complement(1214603..1215595) Burkholderia cenocepacia J2315 6928817 YP_002233736.1 CDS BCAM1119 NC_011001.1 1215809 1216216 R hypothetical protein complement(1215809..1216216) Burkholderia cenocepacia J2315 6928818 YP_002233737.1 CDS dppA NC_011001.1 1216595 1218256 D periplasmic dipeptide transport protein 1216595..1218256 Burkholderia cenocepacia J2315 6928819 YP_002233738.1 CDS BCAM1121 NC_011001.1 1218302 1219249 R putative taurine dioxygenase complement(1218302..1219249) Burkholderia cenocepacia J2315 6930443 YP_002233739.1 CDS BCAM1122 NC_011001.1 1219398 1220351 R Similar to Escherichia coli taud alpha-ketoglutarate-dependent taurine dioxygenase, (2- aminoethanesulfonate dioxygenase) (sulfate starvation-induced protein 3) (ssi3). UniProt:P37610 (EMBL:ECPS1) (282 aa) fasta scores: E()=2.6e-32, 37.319% id in 276 aa; contains extra 22 amino acids at N terminus; putative taurine dioxygenase complement(1219398..1220351) Burkholderia cenocepacia J2315 6928820 YP_002233740.1 CDS BCAM1123 NC_011001.1 1220501 1221346 R ABC transporter ATP-binding protein complement(1220501..1221346) Burkholderia cenocepacia J2315 6928821 YP_002233741.1 CDS BCAM1124 NC_011001.1 1221386 1222201 R putative ABC transporter system permease complement(1221386..1222201) Burkholderia cenocepacia J2315 6928822 YP_002233742.1 CDS BCAM1125 NC_011001.1 1222237 1223079 R putative ABC transporter system permease complement(1222237..1223079) Burkholderia cenocepacia J2315 6928823 YP_002233743.1 CDS BCAM1126 NC_011001.1 1223094 1224161 R hypothetical protein complement(1223094..1224161) Burkholderia cenocepacia J2315 6928824 YP_002233744.1 CDS BCAM1127 NC_011001.1 1224266 1225513 R hypothetical protein complement(1224266..1225513) Burkholderia cenocepacia J2315 6928825 YP_002233745.1 CDS BCAM1128 NC_011001.1 1225520 1226617 R Similar to ) bacteriophage sfii (shigella flexneri bacteriophage ii). gtrb UniProt:P68668 (EMBL:AF021347 (309 aa) fasta scores: E()=8.8e-58, 54.072% id in 307 aa; contains additional C terminal 42 amino acids; putative glycosyl transferase family protein complement(1225520..1226617) Burkholderia cenocepacia J2315 6928826 YP_002233746.1 CDS BCAM1129 NC_011001.1 1226932 1227306 D hypothetical protein 1226932..1227306 Burkholderia cenocepacia J2315 6928827 YP_002233747.1 CDS BCAM1130 NC_011001.1 1227329 1228393 R hypothetical protein complement(1227329..1228393) Burkholderia cenocepacia J2315 6928828 YP_002233748.1 CDS BCAM1131 NC_011001.1 1228488 1229366 R LysR family regulatory protein complement(1228488..1229366) Burkholderia cenocepacia J2315 6928829 YP_002233749.1 CDS BCAM1132 NC_011001.1 1229467 1231038 D putative multidrug resistance transporter protein 1229467..1231038 Burkholderia cenocepacia J2315 6928830 YP_002233750.1 CDS BCAM1133 NC_011001.1 1231273 1232457 R LysR family regulatory protein complement(1231273..1232457) Burkholderia cenocepacia J2315 6928831 YP_002233751.1 CDS BCAM1134 NC_011001.1 1232519 1233247 R putative Asp/Glu/Hydantoin racemase complement(1232519..1233247) Burkholderia cenocepacia J2315 6928832 YP_002233752.1 CDS BCAM1135 NC_011001.1 1233271 1234803 R putative cytosine/purines, uracil, thiamine, allantoin permease complement(1233271..1234803) Burkholderia cenocepacia J2315 6928833 YP_002233753.1 CDS BCAM1136 NC_011001.1 1235510 1236061 D hypothetical protein 1235510..1236061 Burkholderia cenocepacia J2315 6928834 YP_002233754.1 CDS BCAM1137 NC_011001.1 1236125 1236886 R putative lipoprotein complement(1236125..1236886) Burkholderia cenocepacia J2315 6928835 YP_002233755.1 CDS BCAM1138 NC_011001.1 1237179 1238486 R major facilitator superfamily protein complement(1237179..1238486) Burkholderia cenocepacia J2315 6928836 YP_002233756.1 CDS BCAM1139 NC_011001.1 1239001 1239471 D MarR family regulatory protein 1239001..1239471 Burkholderia cenocepacia J2315 6928837 YP_002233757.1 CDS BCAM1140 NC_011001.1 1239497 1241791 R putative aldehyde oxidase/xanthine dehydrogenase complement(1239497..1241791) Burkholderia cenocepacia J2315 6928838 YP_002233758.1 CDS BCAM1141 NC_011001.1 1241943 1242596 R putative isochorismatase complement(1241943..1242596) Burkholderia cenocepacia J2315 6928839 YP_002233759.1 CDS BCAM1142 NC_011001.1 1242616 1243656 R hypothetical protein complement(1242616..1243656) Burkholderia cenocepacia J2315 6928840 YP_002233760.1 CDS BCAM1143 NC_011001.1 1243702 1244532 R putative hydrolase complement(1243702..1244532) Burkholderia cenocepacia J2315 6928841 YP_002233761.1 CDS BCAM1144 NC_011001.1 1244560 1245312 R putative Asp/Glu/Hydantoin racemase complement(1244560..1245312) Burkholderia cenocepacia J2315 6928842 YP_002233762.1 CDS BCAM1146 NC_011001.1 1245614 1246771 D putative flavoprotein monooxygenase 1245614..1246771 Burkholderia cenocepacia J2315 6928843 YP_002233763.1 CDS BCAM1147 NC_011001.1 1246947 1247450 D isoquinoline 1-oxidoreductase subunit alpha 1246947..1247450 Burkholderia cenocepacia J2315 6928844 YP_002233764.1 CDS BCAM1148 NC_011001.1 1247440 1249854 D putative cytochrome c 1247440..1249854 Burkholderia cenocepacia J2315 6928845 YP_002233765.1 CDS BCAM1149 NC_011001.1 1250064 1250411 D putative lipoprotein 1250064..1250411 Burkholderia cenocepacia J2315 6928846 YP_002233766.1 CDS mmsB NC_011001.1 1250527 1251417 R 3-hydroxyisobutyrate dehydrogenase complement(1250527..1251417) Burkholderia cenocepacia J2315 6928847 YP_002233767.1 CDS BCAM1151 NC_011001.1 1251441 1252967 R methylmalonate-semialdehyde dehydrogenase complement(1251441..1252967) Burkholderia cenocepacia J2315 6930554 YP_002233768.1 CDS BCAM1152 NC_011001.1 1253082 1254401 R major facilitator superfamily protein complement(1253082..1254401) Burkholderia cenocepacia J2315 6928848 YP_002233769.1 CDS BCAM1153 NC_011001.1 1254557 1255516 D LysR family regulatory protein 1254557..1255516 Burkholderia cenocepacia J2315 6928849 YP_002233770.1 CDS BCAM1154 NC_011001.1 1255610 1256401 D hypothetical protein 1255610..1256401 Burkholderia cenocepacia J2315 6928850 YP_002233771.1 CDS BCAM1155 NC_011001.1 1256632 1257354 R Similar to Xanthobacter autotrophicus dhlb (s)-2-haloacid dehalogenase, (2-haloalkanoic acid dehalogenase) (l-2-haloacid dehalogenase) (halocarboxylic acid halidohydrolase). UniProt:Q60099 (EMBL:XADHLB) (253 aa) fasta scores: E()=1.5e-10, 33.495% id in 206 aa; contains C terminal truncation fo 24 amino acids; putative haloacid dehalogenase complement(1256632..1257354) Burkholderia cenocepacia J2315 6928851 YP_002233772.1 CDS BCAM1156 NC_011001.1 1257565 1258203 R putative isochorismatase complement(1257565..1258203) Burkholderia cenocepacia J2315 6928852 YP_002233773.1 CDS BCAM1157 NC_011001.1 1258504 1259397 D LysR family regulatory protein 1258504..1259397 Burkholderia cenocepacia J2315 6928853 YP_002233774.1 CDS BCAM1158 NC_011001.1 1259447 1261291 R putative sulfatase complement(1259447..1261291) Burkholderia cenocepacia J2315 6928854 YP_002233775.1 CDS BCAM1159 NC_011001.1 1261425 1262474 D LysR family regulatory protein 1261425..1262474 Burkholderia cenocepacia J2315 6928855 YP_002233776.1 CDS BCAM1160 NC_011001.1 1262758 1265004 D putative cyclic-di-GMP signaling protein 1262758..1265004 Burkholderia cenocepacia J2315 6928856 YP_002233777.1 CDS BCAM1161 NC_011001.1 1265052 1266113 R putative cyclic-di-GMP signaling protein complement(1265052..1266113) Burkholderia cenocepacia J2315 6928857 YP_002233778.1 CDS cheB3 NC_011001.1 1266181 1267185 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(1266181..1267185) Burkholderia cenocepacia J2315 6928858 YP_002233779.1 CDS BCAM1163 NC_011001.1 1267499 1267927 D hypothetical protein 1267499..1267927 Burkholderia cenocepacia J2315 6930422 YP_002233780.1 CDS BCAM1164 NC_011001.1 1267976 1268200 R hypothetical protein complement(1267976..1268200) Burkholderia cenocepacia J2315 6928859 YP_002233781.1 CDS BCAM1165 NC_011001.1 1268476 1269165 D hypothetical protein 1268476..1269165 Burkholderia cenocepacia J2315 6928860 YP_002233782.1 CDS BCAM1166 NC_011001.1 1269162 1270112 D hypothetical protein 1269162..1270112 Burkholderia cenocepacia J2315 6928861 YP_002233783.1 CDS BCAM1167 NC_011001.1 1270128 1271156 D hypothetical protein 1270128..1271156 Burkholderia cenocepacia J2315 6928862 YP_002233784.1 CDS BCAM1168 NC_011001.1 1271273 1271596 D hypothetical protein 1271273..1271596 Burkholderia cenocepacia J2315 6928863 YP_002233785.1 CDS BCAM1169 NC_011001.1 1271636 1272460 R IclR family regulatory protein complement(1271636..1272460) Burkholderia cenocepacia J2315 6928864 YP_002233786.1 CDS BCAM1170 NC_011001.1 1272648 1274303 D putative GMC oxidoreductase 1272648..1274303 Burkholderia cenocepacia J2315 6928865 YP_002233787.1 CDS BCAM1171 NC_011001.1 1274423 1275727 D major facilitator superfamily protein 1274423..1275727 Burkholderia cenocepacia J2315 6928866 YP_002233788.1 CDS puuB NC_011001.1 1276128 1277543 D Contains extra N-terminal 40 amino acids; gamma-glutamylputrescine oxidoreductase 1276128..1277543 Burkholderia cenocepacia J2315 6928867 YP_002233789.1 CDS gabP NC_011001.1 1277726 1279150 D gamma-aminobutyrate permease 1277726..1279150 Burkholderia cenocepacia J2315 6930622 YP_002233790.1 CDS BCAM1174 NC_011001.1 1279363 1282299 D putative molybdopterin oxidoreductase 1279363..1282299 Burkholderia cenocepacia J2315 6930464 YP_002233791.1 CDS BCAM1175 NC_011001.1 1282316 1283059 D putative dimethyl sulfoxide reductase subunit 1282316..1283059 Burkholderia cenocepacia J2315 6928868 YP_002233792.1 CDS dmsC NC_011001.1 1283097 1284044 D putative dimethyl sulfoxide reductase subunit 1283097..1284044 Burkholderia cenocepacia J2315 6928869 YP_002233793.1 CDS BCAM1177 NC_011001.1 1284071 1284823 R IclR family regulatory protein complement(1284071..1284823) Burkholderia cenocepacia J2315 6930442 YP_002233794.1 CDS cobS NC_011001.1 1285009 1285998 D aerobic cobaltochelatase subunit CobS 1285009..1285998 Burkholderia cenocepacia J2315 6928870 YP_002233795.1 CDS BCAM1179 NC_011001.1 1285995 1287716 D aerobic cobaltochelatase subunit CobT 1285995..1287716 Burkholderia cenocepacia J2315 6930424 YP_002233796.1 CDS BCAM1180 NC_011001.1 1287729 1288496 R hypothetical protein complement(1287729..1288496) Burkholderia cenocepacia J2315 6928871 YP_002233797.1 CDS BCAM1181 NC_011001.1 1288493 1289527 R putative phosphate acetyltransferase complement(1288493..1289527) Burkholderia cenocepacia J2315 6928872 YP_002233798.1 CDS xsc NC_011001.1 1289645 1291462 R catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source; sulfoacetaldehyde acetyltransferase complement(1289645..1291462) Burkholderia cenocepacia J2315 6928873 YP_002233799.1 CDS BCAM1183 NC_011001.1 1291635 1292033 R putative taurine dehydrogenase small subunit complement(1291635..1292033) Burkholderia cenocepacia J2315 6930665 YP_002233800.1 CDS BCAM1184 NC_011001.1 1292194 1293720 R GntR family regulatory protein complement(1292194..1293720) Burkholderia cenocepacia J2315 6928874 YP_002233801.1 CDS BCAM1185 NC_011001.1 1293982 1294320 D hypothetical protein 1293982..1294320 Burkholderia cenocepacia J2315 6928875 YP_002233802.1 CDS BCAM1186 NC_011001.1 1294366 1295820 D Similar to BCAL0451, 96.488% identity (96.488% ungapped) in 484 aa overlap (1-484:1-484), and BCAM2493, 68.153% identity (68.153% ungapped) in 471 aa overlap (14-484:12-482); putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 1294366..1295820 Burkholderia cenocepacia J2315 6928876 YP_002233803.1 CDS BCAM1187 NC_011001.1 1295866 1298085 R TonB-dependent siderophore receptor complement(1295866..1298085) Burkholderia cenocepacia J2315 6928877 YP_002233804.1 CDS BCAM1188 NC_011001.1 1298411 1299472 D putative L-asparaginase II 1298411..1299472 Burkholderia cenocepacia J2315 6928878 YP_002233805.1 CDS BCAM1189 NC_011001.1 1299541 1300515 R LysR family regulatory protein complement(1299541..1300515) Burkholderia cenocepacia J2315 6928879 YP_002233806.1 CDS aspA NC_011001.1 1300657 1302063 D catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 1300657..1302063 Burkholderia cenocepacia J2315 6928880 YP_002233807.1 CDS ansP NC_011001.1 1302141 1303646 D L-asparagine permease 1302141..1303646 Burkholderia cenocepacia J2315 6930359 YP_002233808.1 CDS BCAM1192 NC_011001.1 1303720 1304403 R putative carboxylesterase complement(1303720..1304403) Burkholderia cenocepacia J2315 6930347 YP_002233809.1 CDS BCAM1193 NC_011001.1 1304662 1304904 D SpoVT/AbrB family regulatory protein 1304662..1304904 Burkholderia cenocepacia J2315 6928881 YP_002233810.1 CDS BCAM1194 NC_011001.1 1304901 1305308 D putative PIN domain-containing protein 1304901..1305308 Burkholderia cenocepacia J2315 6928882 YP_002233811.1 CDS BCAM1195 NC_011001.1 1305710 1308085 D two-component regulatory system sensor kinase 1305710..1308085 Burkholderia cenocepacia J2315 6928883 YP_002233812.1 CDS BCAM1196 NC_011001.1 1308090 1308836 D putative methyl-accepting chemotaxis protein 1308090..1308836 Burkholderia cenocepacia J2315 6928884 YP_002233813.1 CDS BCAM1197 NC_011001.1 1308833 1309414 D hypothetical protein 1308833..1309414 Burkholderia cenocepacia J2315 6928885 YP_002233814.1 CDS BCAM1198 NC_011001.1 1309437 1310396 D hypothetical protein 1309437..1310396 Burkholderia cenocepacia J2315 6928886 YP_002233815.1 CDS BCAM1199 NC_011001.1 1310426 1310791 D two-component regulatory system response regulator protein 1310426..1310791 Burkholderia cenocepacia J2315 6928887 YP_002233816.1 CDS BCAM1200 NC_011001.1 1310937 1311395 D hypothetical protein 1310937..1311395 Burkholderia cenocepacia J2315 6928888 YP_002233817.1 CDS BCAM1201 NC_011001.1 1311426 1312316 R LysR family regulatory protein complement(1311426..1312316) Burkholderia cenocepacia J2315 6928889 YP_002233818.1 CDS BCAM1202 NC_011001.1 1312454 1313887 D putative multidrug resistance transporter protein 1312454..1313887 Burkholderia cenocepacia J2315 6928890 YP_002233819.1 CDS BCAM1203 NC_011001.1 1314072 1314866 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1314072..1314866 Burkholderia cenocepacia J2315 6928891 YP_002233820.1 CDS dadX NC_011001.1 1315053 1316174 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(1315053..1316174) Burkholderia cenocepacia J2315 6928892 YP_002233821.1 CDS BCAM1205 NC_011001.1 1316476 1316847 D hypothetical protein 1316476..1316847 Burkholderia cenocepacia J2315 6930436 YP_002233822.1 CDS BCAM1206 NC_011001.1 1316916 1317863 R LysR family regulatory protein complement(1316916..1317863) Burkholderia cenocepacia J2315 6928893 YP_002233823.1 CDS BCAM1207 NC_011001.1 1317983 1321522 D ABC transporter ATP-binding membrane protein 1317983..1321522 Burkholderia cenocepacia J2315 6928894 YP_002233824.1 CDS glnH NC_011001.1 1321921 1322673 D similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein 1321921..1322673 Burkholderia cenocepacia J2315 6928895 YP_002233825.1 CDS glnP NC_011001.1 1322740 1323396 D similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 1322740..1323396 Burkholderia cenocepacia J2315 6930478 YP_002233826.1 CDS glnQ NC_011001.1 1323399 1324121 D similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein 1323399..1324121 Burkholderia cenocepacia J2315 6930479 YP_002233827.1 CDS BCAM1211 NC_011001.1 1324142 1325191 D family C45 cysteine peptidase; cysteine peptidase/transferase, family C45 1324142..1325191 Burkholderia cenocepacia J2315 6930480 YP_002233828.1 CDS BCAM1212 NC_011001.1 1325207 1326541 D hypothetical protein 1325207..1326541 Burkholderia cenocepacia J2315 6928896 YP_002233829.1 CDS BCAM1213 NC_011001.1 1326567 1327121 D hypothetical protein 1326567..1327121 Burkholderia cenocepacia J2315 6928897 YP_002233830.1 CDS BCAM1214 NC_011001.1 1327329 1328228 D putative beta-hydroxylase 1327329..1328228 Burkholderia cenocepacia J2315 6928898 YP_002233831.1 CDS BCAM1215 NC_011001.1 1328397 1329185 D hypothetical protein 1328397..1329185 Burkholderia cenocepacia J2315 6928899 YP_002233832.1 CDS ahpF NC_011001.1 1329280 1330881 R alkyl hydroperoxide reductase subunit F complement(1329280..1330881) Burkholderia cenocepacia J2315 6928900 YP_002233833.1 CDS ahpC NC_011001.1 1331000 1331563 R alkyl hydroperoxide reductase subunit C complement(1331000..1331563) Burkholderia cenocepacia J2315 6930340 YP_002233834.1 CDS BCAM1218 NC_011001.1 1332060 1332956 R LysR family regulatory protein complement(1332060..1332956) Burkholderia cenocepacia J2315 6930339 YP_002233835.1 CDS BCAM1219 NC_011001.1 1333135 1334301 D putative ligand-binding receptor 1333135..1334301 Burkholderia cenocepacia J2315 6928901 YP_002233836.1 CDS BCAM1220 NC_011001.1 1334327 1334851 D putative hydrolase 1334327..1334851 Burkholderia cenocepacia J2315 6928902 YP_002233837.1 CDS BCAM1221 NC_011001.1 1334844 1336094 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1334844..1336094 Burkholderia cenocepacia J2315 6928903 YP_002233838.1 CDS BCAM1222 NC_011001.1 1336125 1336961 R putative cytochrome complement(1336125..1336961) Burkholderia cenocepacia J2315 6928904 YP_002233839.1 CDS BCAM1223 NC_011001.1 1337241 1338497 R hypothetical protein complement(1337241..1338497) Burkholderia cenocepacia J2315 6928905 YP_002233840.1 CDS glmS4 NC_011001.1 1338506 1340329 R family C44 cysteine peptidase; glucosamine--fructose-6-phosphate aminotransferase 4 complement(1338506..1340329) Burkholderia cenocepacia J2315 6928906 YP_002233841.1 CDS BCAM1225 NC_011001.1 1340448 1340936 R hypothetical protein complement(1340448..1340936) Burkholderia cenocepacia J2315 6930477 YP_002233842.1 CDS BCAM1226 NC_011001.1 1340914 1342185 R predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase complement(1340914..1342185) Burkholderia cenocepacia J2315 6928907 YP_002233843.1 CDS BCAM1227 NC_011001.1 1342182 1344278 R polysaccharide deacetylase complement(1342182..1344278) Burkholderia cenocepacia J2315 6928908 YP_002233844.1 CDS BCAM1228 NC_011001.1 1344293 1346926 R putative polysaccharide biosynthesis protein complement(1344293..1346926) Burkholderia cenocepacia J2315 6928909 YP_002233845.1 CDS BCAM1229 NC_011001.1 1347031 1347789 R hypothetical protein complement(1347031..1347789) Burkholderia cenocepacia J2315 6928910 YP_002233846.1 CDS BCAM1230 NC_011001.1 1347852 1348310 R hypothetical protein complement(1347852..1348310) Burkholderia cenocepacia J2315 6928911 YP_002233847.1 CDS BCAM1232 NC_011001.1 1348911 1349906 R LysR family regulatory protein complement(1348911..1349906) Burkholderia cenocepacia J2315 6928912 YP_002233848.1 CDS BCAM1233 NC_011001.1 1350496 1351911 D hypothetical protein 1350496..1351911 Burkholderia cenocepacia J2315 6928913 YP_002233849.1 CDS BCAM1234 NC_011001.1 1351976 1352917 D hypothetical protein 1351976..1352917 Burkholderia cenocepacia J2315 6928914 YP_002233850.1 CDS BCAM1235 NC_011001.1 1352926 1353909 D transglutaminase-like protein 1352926..1353909 Burkholderia cenocepacia J2315 6928915 YP_002233851.1 CDS BCAM1236 NC_011001.1 1354003 1357416 D transglutaminase-like protein 1354003..1357416 Burkholderia cenocepacia J2315 6928916 YP_002233852.1 CDS BCAM1237 NC_011001.1 1357577 1360225 D hypothetical protein 1357577..1360225 Burkholderia cenocepacia J2315 6928917 YP_002233853.1 CDS BCAM1238 NC_011001.1 1360219 1361274 D transglutaminase-like protein 1360219..1361274 Burkholderia cenocepacia J2315 6928918 YP_002233854.1 CDS BCAM1239 NC_011001.1 1361433 1361723 D hypothetical protein 1361433..1361723 Burkholderia cenocepacia J2315 6928919 YP_002233855.1 CDS pip NC_011001.1 1361792 1362724 R family S33 serine peptidase; proline iminopeptidase complement(1361792..1362724) Burkholderia cenocepacia J2315 6928920 YP_002233856.1 CDS BCAM1241 NC_011001.1 1363045 1364196 D putative acyltransferase 1363045..1364196 Burkholderia cenocepacia J2315 6930602 YP_002233857.1 CDS BCAM1242 NC_011001.1 1364226 1365044 R hypothetical protein complement(1364226..1365044) Burkholderia cenocepacia J2315 6928921 YP_002233858.1 CDS BCAM1242A NC_011001.1 1365215 1365655 R hypothetical protein complement(1365215..1365655) Burkholderia cenocepacia J2315 6928922 YP_002233859.1 CDS BCAM1243 NC_011001.1 1365918 1366982 R putative aminotransferase complement(1365918..1366982) Burkholderia cenocepacia J2315 6928923 YP_002233860.1 CDS BCAM1244 NC_011001.1 1366982 1368163 R putative phosphonopyruvate decarboxylase complement(1366982..1368163) Burkholderia cenocepacia J2315 6928924 YP_002233861.1 CDS BCAM1245 NC_011001.1 1368160 1369848 R Similar over its N-terminal half to phosphoenolpyruvate phosphomutase, and over the C-terminal half to sugar nucleotidyltransferase; putative phosphoenolpyruvate phosphomutase/sugar nucleotidyltransferase complement(1368160..1369848) Burkholderia cenocepacia J2315 6928925 YP_002233862.1 CDS BCAM1246 NC_011001.1 1369845 1370612 R putative nucleotidyltransferase complement(1369845..1370612) Burkholderia cenocepacia J2315 6928926 YP_002233863.1 CDS BCAM1247 NC_011001.1 1370648 1371649 R hypothetical protein complement(1370648..1371649) Burkholderia cenocepacia J2315 6928927 YP_002233864.1 CDS BCAM1248 NC_011001.1 1371646 1372455 R putative oxygenase complement(1371646..1372455) Burkholderia cenocepacia J2315 6928928 YP_002233865.1 CDS BCAM1249 NC_011001.1 1372452 1373135 R putative CDP-alcohol phosphatidyltransferase complement(1372452..1373135) Burkholderia cenocepacia J2315 6928929 YP_002233866.1 CDS BCAM1250 NC_011001.1 1373786 1375300 D putative acetyl-CoA hydrolase/transferase 1373786..1375300 Burkholderia cenocepacia J2315 6928930 YP_002233867.1 CDS BCAM1252 NC_011001.1 1376821 1377786 D transposase 1376821..1377786 Burkholderia cenocepacia J2315 6928932 YP_002233868.1 CDS BCAM1254 NC_011001.1 1378176 1378616 D MarR family regulatory protein 1378176..1378616 Burkholderia cenocepacia J2315 6928933 YP_002233869.1 CDS BCAM1255 NC_011001.1 1378674 1379744 D hypothetical protein 1378674..1379744 Burkholderia cenocepacia J2315 6928934 YP_002233870.1 CDS BCAM1256 NC_011001.1 1379801 1380298 R hypothetical protein complement(1379801..1380298) Burkholderia cenocepacia J2315 6928935 YP_002233871.1 CDS BCAM1257 NC_011001.1 1380438 1380866 D MerR family regulatory protein 1380438..1380866 Burkholderia cenocepacia J2315 6928936 YP_002233872.1 CDS BCAM1258 NC_011001.1 1381021 1381902 R putative DNA-binding protein complement(1381021..1381902) Burkholderia cenocepacia J2315 6928937 YP_002233873.1 CDS BCAM1259 NC_011001.1 1382085 1383611 R RNA polymerase sigma factor complement(1382085..1383611) Burkholderia cenocepacia J2315 6928938 YP_002233874.1 CDS BCAM1260 NC_011001.1 1383909 1384361 D putative lipoprotein 1383909..1384361 Burkholderia cenocepacia J2315 6928939 YP_002233875.1 CDS BCAM1261 NC_011001.1 1384395 1385258 D hypothetical protein 1384395..1385258 Burkholderia cenocepacia J2315 6928940 YP_002233876.1 CDS ilvD NC_011001.1 1385378 1387237 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(1385378..1387237) Burkholderia cenocepacia J2315 6928941 YP_002233877.1 CDS BCAM1263 NC_011001.1 1387541 1388563 R putative malate/L-lactate dehydrogenase complement(1387541..1388563) Burkholderia cenocepacia J2315 6930513 YP_002233878.1 CDS BCAM1264 NC_011001.1 1388556 1390148 R putative aldehyde dehydrogenase complement(1388556..1390148) Burkholderia cenocepacia J2315 6928942 YP_002233879.1 CDS BCAM1265 NC_011001.1 1390219 1391844 R putative amino acid permease complement(1390219..1391844) Burkholderia cenocepacia J2315 6928943 YP_002233880.1 CDS BCAM1266 NC_011001.1 1392070 1392990 R putative dihydrodipicolinate synthase complement(1392070..1392990) Burkholderia cenocepacia J2315 6928944 YP_002233881.1 CDS BCAM1267 NC_011001.1 1393242 1394174 D hydroxyproline-2-epimerase 1393242..1394174 Burkholderia cenocepacia J2315 6928945 YP_002233882.1 CDS BCAM1268 NC_011001.1 1394171 1395298 D putative FAD-binding oxidoreductase 1394171..1395298 Burkholderia cenocepacia J2315 6928946 YP_002233883.1 CDS BCAM1268a NC_011001.1 1395581 1395814 D 2Fe-2S ferredoxin 1395581..1395814 Burkholderia cenocepacia J2315 6928947 YP_002233884.1 CDS BCAM1269 NC_011001.1 1395811 1397079 D putative pyridine nucleotide-disulphide oxidoreductase 1395811..1397079 Burkholderia cenocepacia J2315 6928948 YP_002233885.1 CDS mhbR NC_011001.1 1397130 1398074 R LysR family regulatory protein complement(1397130..1398074) Burkholderia cenocepacia J2315 6928949 YP_002233886.1 CDS mhbD NC_011001.1 1398238 1399281 D gentisate 1,2-dioxygenase 1398238..1399281 Burkholderia cenocepacia J2315 6930549 YP_002233887.1 CDS mhbH NC_011001.1 1399369 1400067 D putative fumarylpyruvate hydrolase 1399369..1400067 Burkholderia cenocepacia J2315 6930545 YP_002233888.1 CDS mhbI NC_011001.1 1400102 1400743 D putative maleylpyruvate isomerase 1400102..1400743 Burkholderia cenocepacia J2315 6930546 YP_002233889.1 CDS mhbM NC_011001.1 1400776 1401984 D catalyzes the formation of catechol from salicylate; salicylate hydroxylase 1400776..1401984 Burkholderia cenocepacia J2315 6930547 YP_002233890.1 CDS mhbT NC_011001.1 1402065 1403426 D putative 3-hydroxybenzoate transporter 1402065..1403426 Burkholderia cenocepacia J2315 6930548 YP_002233891.1 CDS BCAM1276 NC_011001.1 1403526 1403876 D ArsR family regulatory protein 1403526..1403876 Burkholderia cenocepacia J2315 6930550 YP_002233892.1 CDS BCAM1277 NC_011001.1 1403866 1404300 D hypothetical protein 1403866..1404300 Burkholderia cenocepacia J2315 6928950 YP_002233893.1 CDS BCAM1278 NC_011001.1 1404302 1404724 D hypothetical protein 1404302..1404724 Burkholderia cenocepacia J2315 6928951 YP_002233894.1 CDS BCAM1279 NC_011001.1 1404833 1405183 R hypothetical protein complement(1404833..1405183) Burkholderia cenocepacia J2315 6928952 YP_002233895.1 CDS BCAM1280 NC_011001.1 1405387 1406880 D putative GntR-family transcriptional regulator/aminotransferase 1405387..1406880 Burkholderia cenocepacia J2315 6928953 YP_002233896.1 CDS BCAM1280a NC_011001.1 1406965 1407243 R hypothetical protein complement(1406965..1407243) Burkholderia cenocepacia J2315 6928954 YP_002233897.1 CDS BCAM1282 NC_011001.1 1407340 1408725 R putative di-haem cytochrome c peroxidase complement(1407340..1408725) Burkholderia cenocepacia J2315 6928955 YP_002233898.1 CDS BCAM1283 NC_011001.1 1408722 1410185 R putative phosphoesterase complement(1408722..1410185) Burkholderia cenocepacia J2315 6928956 YP_002233899.1 CDS BCAM1284 NC_011001.1 1410350 1411198 D putative methyltransferase 1410350..1411198 Burkholderia cenocepacia J2315 6928957 YP_002233900.1 CDS BCAM1285 NC_011001.1 1411293 1411604 R hypothetical protein complement(1411293..1411604) Burkholderia cenocepacia J2315 6928958 YP_002233901.1 CDS BCAM1286 NC_011001.1 1411601 1413622 R secondary glycine betaine transporter betu; putative betaine/carnitine/choline family transporter complement(1411601..1413622) Burkholderia cenocepacia J2315 6928959 YP_002233902.1 CDS BCAM1287 NC_011001.1 1413945 1415132 R putative porin complement(1413945..1415132) Burkholderia cenocepacia J2315 6928960 YP_002233903.1 CDS BCAM1288 NC_011001.1 1415247 1417667 R putative glycoside hydrolase complement(1415247..1417667) Burkholderia cenocepacia J2315 6928961 YP_002233904.1 CDS BCAM1289 NC_011001.1 1417695 1418966 R major facilitator superfamily protein complement(1417695..1418966) Burkholderia cenocepacia J2315 6928962 YP_002233905.1 CDS BCAM1290 NC_011001.1 1419396 1420382 D RpiR-family transcriptional regulator 1419396..1420382 Burkholderia cenocepacia J2315 6928963 YP_002233906.1 CDS BCAM1291 NC_011001.1 1420379 1421377 D family T2 threonine peptidase; L-asparaginase 1420379..1421377 Burkholderia cenocepacia J2315 6928964 YP_002233907.1 CDS BCAM1292 NC_011001.1 1421403 1423307 D ABC transporter ATP-binding protein 1421403..1423307 Burkholderia cenocepacia J2315 6928965 YP_002233908.1 CDS BCAM1293 NC_011001.1 1423410 1424972 D ABC transporter substrate-binding protein 1423410..1424972 Burkholderia cenocepacia J2315 6928966 YP_002233909.1 CDS BCAM1294 NC_011001.1 1425040 1425960 D ABC transporter permease 1425040..1425960 Burkholderia cenocepacia J2315 6928967 YP_002233910.1 CDS BCAM1295 NC_011001.1 1425968 1426861 D ABC transporter permease 1425968..1426861 Burkholderia cenocepacia J2315 6928968 YP_002233911.1 CDS BCAM1296 NC_011001.1 1426861 1427943 D putative peptidase 1426861..1427943 Burkholderia cenocepacia J2315 6928969 YP_002233912.1 CDS BCAM1297 NC_011001.1 1427940 1428767 D family M55 metallo peptidase; family M55 metallopeptidase 1427940..1428767 Burkholderia cenocepacia J2315 6928970 YP_002233913.1 CDS BCAM1298 NC_011001.1 1428962 1429741 D putative transcriptional regulator 1428962..1429741 Burkholderia cenocepacia J2315 6928971 YP_002233914.1 CDS pcaG NC_011001.1 1430210 1430803 R protocatechuate 3,4-dioxygenase subunit alpha complement(1430210..1430803) Burkholderia cenocepacia J2315 6928972 YP_002233915.1 CDS pcaH NC_011001.1 1430807 1431514 R protocatechuate 3,4-dioxygenase subunit beta complement(1430807..1431514) Burkholderia cenocepacia J2315 6930582 YP_002233916.1 CDS BCAM1301 NC_011001.1 1431790 1432356 R hypothetical protein complement(1431790..1432356) Burkholderia cenocepacia J2315 6930583 YP_002233917.1 CDS BCAM1302 NC_011001.1 1432477 1433214 D putative transcriptional regulator 1432477..1433214 Burkholderia cenocepacia J2315 6928973 YP_002233918.1 CDS BCAM1303 NC_011001.1 1433292 1434278 D LysR family regulatory protein 1433292..1434278 Burkholderia cenocepacia J2315 6928974 YP_002233919.1 CDS BCAM1304 NC_011001.1 1434411 1434770 D hypothetical protein 1434411..1434770 Burkholderia cenocepacia J2315 6928975 YP_002233920.1 CDS BCAM1305 NC_011001.1 1434845 1435141 D putative transcriptional regulator 1434845..1435141 Burkholderia cenocepacia J2315 6928976 YP_002233921.1 CDS BCAM1306 NC_011001.1 1435237 1436511 R putative amino acid permease complement(1435237..1436511) Burkholderia cenocepacia J2315 6928977 YP_002233922.1 CDS BCAM1307 NC_011001.1 1436652 1441163 R putative helicase complement(1436652..1441163) Burkholderia cenocepacia J2315 6928978 YP_002233923.1 CDS BCAM1308 NC_011001.1 1441328 1441852 R hypothetical protein complement(1441328..1441852) Burkholderia cenocepacia J2315 6928979 YP_002233924.1 CDS ggt2 NC_011001.1 1442252 1443973 D family T3 threonine peptidase; gamma-glutamyltransferase precursor 2 1442252..1443973 Burkholderia cenocepacia J2315 6928980 YP_002233925.1 CDS amiR NC_011001.1 1444113 1444724 R putative transcription antitermination regulator complement(1444113..1444724) Burkholderia cenocepacia J2315 6930470 YP_002233926.1 CDS amiC NC_011001.1 1444731 1445909 R putative aliphatic amidase expression-regulating protein complement(1444731..1445909) Burkholderia cenocepacia J2315 6930345 YP_002233927.1 CDS BCAM1312 NC_011001.1 1445906 1447462 R putative amidase accessory protein complement(1445906..1447462) Burkholderia cenocepacia J2315 6930342 YP_002233928.1 CDS BCAM1313 NC_011001.1 1447459 1448292 R putative amidase accessory protein complement(1447459..1448292) Burkholderia cenocepacia J2315 6928981 YP_002233929.1 CDS amiS NC_011001.1 1448292 1448774 R putative transporter protein AmiS complement(1448292..1448774) Burkholderia cenocepacia J2315 6928982 YP_002233930.1 CDS amiE NC_011001.1 1448843 1449880 R aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates; acylamide amidohydrolase complement(1448843..1449880) Burkholderia cenocepacia J2315 6930346 YP_002233931.1 CDS BCAM1316 NC_011001.1 1450369 1451784 R transport system outer membrane protein complement(1450369..1451784) Burkholderia cenocepacia J2315 6930343 YP_002233932.1 CDS BCAM1316a NC_011001.1 1452066 1452239 D hypothetical protein 1452066..1452239 Burkholderia cenocepacia J2315 6928983 YP_002233933.1 CDS BCAM1316b NC_011001.1 1452465 1452650 D hypothetical protein 1452465..1452650 Burkholderia cenocepacia J2315 6928984 YP_002233934.1 CDS BCAM1317 NC_011001.1 1452794 1454914 D family C39 cysteine peptidase; putative toxin secretion/processing protein 1452794..1454914 Burkholderia cenocepacia J2315 6928985 YP_002233935.1 CDS BCAM1318 NC_011001.1 1454914 1455915 D Similar to an internal region of the Bordetella pertussis dermonecrotic toxin Dnt; hypothetical protein 1454914..1455915 Burkholderia cenocepacia J2315 6928986 YP_002233936.1 CDS BCAM1319 NC_011001.1 1455928 1457223 D putative secretion protein 1455928..1457223 Burkholderia cenocepacia J2315 6928987 YP_002233937.1 CDS BCAM1320 NC_011001.1 1457228 1458622 D hypothetical protein 1457228..1458622 Burkholderia cenocepacia J2315 6928988 YP_002233938.1 CDS BCAM1321 NC_011001.1 1458711 1459661 D putative polyphosphate kinase 1458711..1459661 Burkholderia cenocepacia J2315 6928989 YP_002233939.1 CDS BCAM1322 NC_011001.1 1459970 1460557 R hypothetical protein complement(1459970..1460557) Burkholderia cenocepacia J2315 6928990 YP_002233940.1 CDS BCAM1324 NC_011001.1 1460761 1461618 R LysR family regulatory protein complement(1460761..1461618) Burkholderia cenocepacia J2315 6928991 YP_002233941.1 CDS BCAM1325 NC_011001.1 1461749 1462327 D hypothetical protein 1461749..1462327 Burkholderia cenocepacia J2315 6928992 YP_002233942.1 CDS BCAM1325A NC_011001.1 1462327 1462449 D hypothetical protein 1462327..1462449 Burkholderia cenocepacia J2315 6928993 YP_002233943.1 CDS BCAM1326 NC_011001.1 1462532 1464733 R putative beta-glucosidase complement(1462532..1464733) Burkholderia cenocepacia J2315 6928994 YP_002233944.1 CDS BCAM1327 NC_011001.1 1465315 1467744 D Weakly similar to the listed database matches.; hypothetical protein 1465315..1467744 Burkholderia cenocepacia J2315 6928995 YP_002233945.1 CDS BCAM1330 NC_011001.1 1469947 1471128 R putative polysaccharide export protein complement(1469947..1471128) Burkholderia cenocepacia J2315 6928997 YP_002233946.1 CDS BCAM1331 NC_011001.1 1471802 1474117 D putative tyrosine-protein kinase 1471802..1474117 Burkholderia cenocepacia J2315 6928998 YP_002233947.1 CDS BCAM1332 NC_011001.1 1474314 1475738 D hypothetical protein 1474314..1475738 Burkholderia cenocepacia J2315 6928999 YP_002233948.1 CDS BCAM1333 NC_011001.1 1475913 1477058 D putative exopolysaccharide acyltransferase 1475913..1477058 Burkholderia cenocepacia J2315 6929000 YP_002233949.1 CDS BCAM1334 NC_011001.1 1477268 1479079 D hypothetical protein 1477268..1479079 Burkholderia cenocepacia J2315 6929001 YP_002233950.1 CDS BCAM1335 NC_011001.1 1479386 1480576 D glycosyltransferase 1479386..1480576 Burkholderia cenocepacia J2315 6929002 YP_002233951.1 CDS BCAM1336 NC_011001.1 1480615 1481868 D putative exopolysaccharide transporter 1480615..1481868 Burkholderia cenocepacia J2315 6929003 YP_002233952.1 CDS BCAM1337 NC_011001.1 1482023 1483102 R glycosyltransferase complement(1482023..1483102) Burkholderia cenocepacia J2315 6929004 YP_002233953.1 CDS BCAM1338 NC_011001.1 1483124 1484278 R glycosyltransferase complement(1483124..1484278) Burkholderia cenocepacia J2315 6929005 YP_002233954.1 CDS BCAM1339 NC_011001.1 1484993 1486237 D hypothetical protein 1484993..1486237 Burkholderia cenocepacia J2315 6929006 YP_002233955.1 CDS manC NC_011001.1 1486332 1487852 R mannose-1-phosphate guanylyltransferase complement(1486332..1487852) Burkholderia cenocepacia J2315 6929007 YP_002233956.1 CDS BCAM1341 NC_011001.1 1487849 1488427 R hypothetical protein complement(1487849..1488427) Burkholderia cenocepacia J2315 6930539 YP_002233957.1 CDS BCAM1342 NC_011001.1 1489748 1491139 D putative sigma-54 interacting transcriptional regulator 1489748..1491139 Burkholderia cenocepacia J2315 6929008 YP_002233958.1 CDS BCAM1343 NC_011001.1 1491194 1493680 R putative exported glycosyl hydrolase complement(1491194..1493680) Burkholderia cenocepacia J2315 6929009 YP_002233959.1 CDS BCAM1344 NC_011001.1 1493677 1494732 R hypothetical protein complement(1493677..1494732) Burkholderia cenocepacia J2315 6929010 YP_002233960.1 CDS BCAM1345 NC_011001.1 1494729 1495703 R hypothetical protein complement(1494729..1495703) Burkholderia cenocepacia J2315 6929011 YP_002233961.1 CDS BCAM1346 NC_011001.1 1495700 1496896 R putative acyl-CoA dehydrogenase complement(1495700..1496896) Burkholderia cenocepacia J2315 6929012 YP_002233962.1 CDS BCAM1347 NC_011001.1 1496893 1497144 R Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein complement(1496893..1497144) Burkholderia cenocepacia J2315 6929013 YP_002233963.1 CDS BCAM1348 NC_011001.1 1497325 1498107 R putative cyclic nucleotide-binding protein complement(1497325..1498107) Burkholderia cenocepacia J2315 6929014 YP_002233964.1 CDS BCAM1349 NC_011001.1 1499028 1499810 D putative regulatory protein 1499028..1499810 Burkholderia cenocepacia J2315 6929015 YP_002233965.1 CDS BCAM1350 NC_011001.1 1499813 1501228 D putative sugar transferase 1499813..1501228 Burkholderia cenocepacia J2315 6929016 YP_002233966.1 CDS BCAM1351 NC_011001.1 1501613 1502005 D putative regulatory protein 1501613..1502005 Burkholderia cenocepacia J2315 6929017 YP_002233967.1 CDS BCAM1352 NC_011001.1 1502155 1503933 D putative phosphoesterase 1502155..1503933 Burkholderia cenocepacia J2315 6929018 YP_002233968.1 CDS ald NC_011001.1 1503974 1505089 R alanine dehydrogenase complement(1503974..1505089) Burkholderia cenocepacia J2315 6929019 YP_002233969.1 CDS BCAM1354 NC_011001.1 1505386 1505802 D hypothetical protein 1505386..1505802 Burkholderia cenocepacia J2315 6930341 YP_002233970.1 CDS kptA NC_011001.1 1505822 1506133 R Similar to the C-terminal part of escherichia coli RNA 2'-phosphotransferase KptA; putative phosphotransferase complement(1505822..1506133) Burkholderia cenocepacia J2315 6929020 YP_002233971.1 CDS BCAM1356 NC_011001.1 1506534 1507274 D putative gluconate 2-dehydrogenase subunit 3 1506534..1507274 Burkholderia cenocepacia J2315 6930523 YP_002233972.1 CDS BCAM1357 NC_011001.1 1507274 1509052 D gluconate 2-dehydrogenase flavoprotein subunit 1507274..1509052 Burkholderia cenocepacia J2315 6929021 YP_002233973.1 CDS BCAM1358 NC_011001.1 1509049 1510476 D gluconate 2-dehydrogenase cytochrome c subunit 1509049..1510476 Burkholderia cenocepacia J2315 6929022 YP_002233974.1 CDS BCAM1359 NC_011001.1 1510686 1512401 D putative efflux pump/antiporter 1510686..1512401 Burkholderia cenocepacia J2315 6929023 YP_002233975.1 CDS BCAM1360 NC_011001.1 1512472 1513236 R short chain dehydrogenase complement(1512472..1513236) Burkholderia cenocepacia J2315 6929024 YP_002233976.1 CDS BCAM1361 NC_011001.1 1513256 1514251 R sugar-binding periplasmic protein precursor complement(1513256..1514251) Burkholderia cenocepacia J2315 6929025 YP_002233977.1 CDS BCAM1362 NC_011001.1 1514411 1516306 R putative penicillin-binding protein complement(1514411..1516306) Burkholderia cenocepacia J2315 6929026 YP_002233978.1 CDS BCAM1363 NC_011001.1 1516723 1517070 R hypothetical protein complement(1516723..1517070) Burkholderia cenocepacia J2315 6929027 YP_002233979.1 CDS BCAM1364 NC_011001.1 1517696 1518907 D putative NAD dependent epimerase/dehydratase 1517696..1518907 Burkholderia cenocepacia J2315 6929028 YP_002233980.1 CDS hpaR NC_011001.1 1519037 1519477 R putative homoprotocatechuate degradative operon repressor complement(1519037..1519477) Burkholderia cenocepacia J2315 6929029 YP_002233981.1 CDS hpaG NC_011001.1 1519631 1520320 D Similar to the N-terminal half of Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG; putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1519631..1520320 Burkholderia cenocepacia J2315 6930510 YP_002233982.1 CDS hpaG' NC_011001.1 1520317 1521081 D Similar to the C-terminal half of Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG; putative 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase 1520317..1521081 Burkholderia cenocepacia J2315 6930506 YP_002233983.1 CDS hpaE NC_011001.1 1521108 1522571 D 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase 1521108..1522571 Burkholderia cenocepacia J2315 6930507 YP_002233984.1 CDS hpaD NC_011001.1 1522618 1523466 D homoprotocatechuate dyoxygenase 1522618..1523466 Burkholderia cenocepacia J2315 6930504 YP_002233985.1 CDS hpaF NC_011001.1 1523511 1523903 D 5-carboxymethyl-2-hydroxymuconate isomerase 1523511..1523903 Burkholderia cenocepacia J2315 6930503 YP_002233986.1 CDS hpaH NC_011001.1 1523924 1524727 D 2-oxo-hept-3-ene-1,7-dioate hydratase 1523924..1524727 Burkholderia cenocepacia J2315 6930505 YP_002233987.1 CDS hpaI NC_011001.1 1524740 1525543 D 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1524740..1525543 Burkholderia cenocepacia J2315 6930508 YP_002233988.1 CDS BCAM1373 NC_011001.1 1525622 1526413 R AraC family regulatory protein complement(1525622..1526413) Burkholderia cenocepacia J2315 6930509 YP_002233989.1 CDS BCAM1374 NC_011001.1 1526509 1526760 D hypothetical protein 1526509..1526760 Burkholderia cenocepacia J2315 6929030 YP_002233990.1 CDS BCAM1375 NC_011001.1 1526791 1527753 D putative zinc-binding dehydrogenase 1526791..1527753 Burkholderia cenocepacia J2315 6929031 YP_002233991.1 CDS BCAM1376 NC_011001.1 1527898 1528989 R putative porin complement(1527898..1528989) Burkholderia cenocepacia J2315 6929032 YP_002233992.1 CDS BCAM1377 NC_011001.1 1529144 1530211 R ABC transporter ATP-binding protein complement(1529144..1530211) Burkholderia cenocepacia J2315 6929033 YP_002233993.1 CDS BCAM1378 NC_011001.1 1530204 1531976 R ABC transporter permease complement(1530204..1531976) Burkholderia cenocepacia J2315 6929034 YP_002233994.1 CDS BCAM1379 NC_011001.1 1532084 1533184 R ABC transporter substrate-binding protein complement(1532084..1533184) Burkholderia cenocepacia J2315 6929035 YP_002233995.1 CDS BCAM1380 NC_011001.1 1533381 1534859 R GntR family regulatory protein complement(1533381..1534859) Burkholderia cenocepacia J2315 6929036 YP_002233996.1 CDS BCAM1381 NC_011001.1 1534961 1536196 D major facilitator superfamily protein 1534961..1536196 Burkholderia cenocepacia J2315 6929037 YP_002233997.1 CDS BCAM1382 NC_011001.1 1536324 1537004 D two-component regulatory system response regulator protein 1536324..1537004 Burkholderia cenocepacia J2315 6929038 YP_002233998.1 CDS BCAM1383 NC_011001.1 1537081 1538505 D two-component regulatory system sensor kinase 1537081..1538505 Burkholderia cenocepacia J2315 6929039 YP_002233999.1 CDS BCAM1384 NC_011001.1 1538530 1539396 R putative sulfur-carrier protein complement(1538530..1539396) Burkholderia cenocepacia J2315 6929040 YP_002234000.1 CDS BCAM1385 NC_011001.1 1539492 1540445 R putative sulfonates ABC transporter substrate-binding protein complement(1539492..1540445) Burkholderia cenocepacia J2315 6929041 YP_002234001.1 CDS BCAM1386 NC_011001.1 1540479 1541660 R putative cytochrome C complement(1540479..1541660) Burkholderia cenocepacia J2315 6929042 YP_002234002.1 CDS BCAM1387 NC_011001.1 1541711 1542532 R putative sulfonate ABC transporter ATP-binding protein complement(1541711..1542532) Burkholderia cenocepacia J2315 6929043 YP_002234003.1 CDS BCAM1388 NC_011001.1 1542526 1543623 R putative sulfonates ABC transporter permease complement(1542526..1543623) Burkholderia cenocepacia J2315 6929044 YP_002234004.1 CDS BCAM1389 NC_011001.1 1543628 1544662 R hypothetical protein complement(1543628..1544662) Burkholderia cenocepacia J2315 6929045 YP_002234005.1 CDS BCAM1390 NC_011001.1 1544694 1545533 R hypothetical protein complement(1544694..1545533) Burkholderia cenocepacia J2315 6929046 YP_002234006.1 CDS BCAM1391 NC_011001.1 1545557 1546642 R putative sulfonate monooxygenase complement(1545557..1546642) Burkholderia cenocepacia J2315 6929047 YP_002234007.1 CDS BCAM1392 NC_011001.1 1546869 1548209 D putative acyl-CoA dehydrogenase 1546869..1548209 Burkholderia cenocepacia J2315 6929048 YP_002234008.1 CDS BCAM1393 NC_011001.1 1548271 1549188 R LysR family regulatory protein complement(1548271..1549188) Burkholderia cenocepacia J2315 6929049 YP_002234009.1 CDS BCAM1394 NC_011001.1 1549263 1549829 D putative cysteine dioxygenase 1549263..1549829 Burkholderia cenocepacia J2315 6929050 YP_002234010.1 CDS BCAM1395 NC_011001.1 1549935 1551560 D putative sulfurtransferase 1549935..1551560 Burkholderia cenocepacia J2315 6929051 YP_002234011.1 CDS BCAM1396 NC_011001.1 1551631 1552776 R putative glycerophosphoryl diester phosphodiesterase complement(1551631..1552776) Burkholderia cenocepacia J2315 6929052 YP_002234012.1 CDS BCAM1397A NC_011001.1 1553147 1554214 D putative squalene/phytoene synthase 1553147..1554214 Burkholderia cenocepacia J2315 6929053 YP_002234013.1 CDS BCAM1398 NC_011001.1 1554694 1555893 D putative porin 1554694..1555893 Burkholderia cenocepacia J2315 6929054 YP_002234014.1 CDS BCAM1399 NC_011001.1 1556003 1556422 R hypothetical protein complement(1556003..1556422) Burkholderia cenocepacia J2315 6929055 YP_002234015.1 CDS BCAM1400 NC_011001.1 1556433 1556870 R putative decarboxylase complement(1556433..1556870) Burkholderia cenocepacia J2315 6929056 YP_002234016.1 CDS BCAM1401 NC_011001.1 1556966 1558450 R GntR family regulatory protein complement(1556966..1558450) Burkholderia cenocepacia J2315 6929057 YP_002234017.1 CDS BCAM1402 NC_011001.1 1558616 1559530 D LysR family regulatory protein 1558616..1559530 Burkholderia cenocepacia J2315 6929058 YP_002234018.1 CDS BCAM1403 NC_011001.1 1559653 1560402 D short chain dehydrogenase 1559653..1560402 Burkholderia cenocepacia J2315 6929059 YP_002234019.1 CDS BCAM1404 NC_011001.1 1560467 1562104 R putative exported glycosyl hydrolase complement(1560467..1562104) Burkholderia cenocepacia J2315 6929060 YP_002234020.1 CDS BCAM1405 NC_011001.1 1562307 1563869 R levansucrase complement(1562307..1563869) Burkholderia cenocepacia J2315 6929061 YP_002234021.1 CDS BCAM1406 NC_011001.1 1564072 1565085 D LacI family regulatory protein 1564072..1565085 Burkholderia cenocepacia J2315 6929062 YP_002234022.1 CDS BCAM1407 NC_011001.1 1565426 1566112 D DJ-1/PfpI family protein 1565426..1566112 Burkholderia cenocepacia J2315 6929063 YP_002234023.1 CDS xenA NC_011001.1 1566254 1567363 D xenobiotic reductase 1566254..1567363 Burkholderia cenocepacia J2315 6929064 YP_002234024.1 CDS BCAM1409 NC_011001.1 1567502 1568572 D hypothetical protein 1567502..1568572 Burkholderia cenocepacia J2315 6930663 YP_002234025.1 CDS BCAM1410 NC_011001.1 1568795 1569169 D putative lipoprotein 1568795..1569169 Burkholderia cenocepacia J2315 6929065 YP_002234026.1 CDS BCAM1411 NC_011001.1 1569208 1570002 R putative short-chain dehydrogenase complement(1569208..1570002) Burkholderia cenocepacia J2315 6929066 YP_002234027.1 CDS BCAM1412 NC_011001.1 1570406 1570960 R hypothetical protein complement(1570406..1570960) Burkholderia cenocepacia J2315 6929067 YP_002234028.1 CDS BCAM1413a NC_011001.1 1571083 1571637 R hypothetical protein complement(1571083..1571637) Burkholderia cenocepacia J2315 6929068 YP_002234029.1 CDS BCAM1414 NC_011001.1 1572001 1572558 D hypothetical protein 1572001..1572558 Burkholderia cenocepacia J2315 6929069 YP_002234030.1 CDS BCAM1415 NC_011001.1 1572791 1573636 D AraC family regulatory protein 1572791..1573636 Burkholderia cenocepacia J2315 6929070 YP_002234031.1 CDS BCAM1416 NC_011001.1 1573649 1574236 R LysE-family transportery complement(1573649..1574236) Burkholderia cenocepacia J2315 6929071 YP_002234032.1 CDS BCAM1417 NC_011001.1 1574336 1575820 R two-component regulatory system sensor kinase complement(1574336..1575820) Burkholderia cenocepacia J2315 6929072 YP_002234033.1 CDS BCAM1418 NC_011001.1 1575817 1576512 R two-component regulatory system response regulator protein complement(1575817..1576512) Burkholderia cenocepacia J2315 6929073 YP_002234034.1 CDS BCAM1419 NC_011001.1 1576545 1578050 R efflux system outer membrane protein complement(1576545..1578050) Burkholderia cenocepacia J2315 6929074 YP_002234035.1 CDS BCAM1420 NC_011001.1 1578056 1579285 R efflux system transport protein complement(1578056..1579285) Burkholderia cenocepacia J2315 6929075 YP_002234036.1 CDS BCAM1421 NC_011001.1 1579322 1582489 R RND family efflux system transporter protein complement(1579322..1582489) Burkholderia cenocepacia J2315 6929076 YP_002234037.1 CDS BCAM1422 NC_011001.1 1582675 1583532 R putative cyclic nucleotide binding protein complement(1582675..1583532) Burkholderia cenocepacia J2315 6929077 YP_002234038.1 CDS BCAM1423 NC_011001.1 1583587 1585239 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 1583587..1585239 Burkholderia cenocepacia J2315 6929078 YP_002234039.1 CDS BCAM1424 NC_011001.1 1585275 1587260 R methyl-accepting chemotaxis protein complement(1585275..1587260) Burkholderia cenocepacia J2315 6929079 YP_002234040.1 CDS BCAM1425 NC_011001.1 1587400 1587831 R hypothetical protein complement(1587400..1587831) Burkholderia cenocepacia J2315 6929080 YP_002234041.1 CDS BCAM1426 NC_011001.1 1587893 1589068 R voltage-gated potassium channel complement(1587893..1589068) Burkholderia cenocepacia J2315 6929081 YP_002234042.1 CDS BCAM1427 NC_011001.1 1589185 1589841 R LysE family transporter complement(1589185..1589841) Burkholderia cenocepacia J2315 6929082 YP_002234043.1 CDS BCAM1428 NC_011001.1 1590126 1590608 D AnsC family regulatory protein 1590126..1590608 Burkholderia cenocepacia J2315 6929083 YP_002234044.1 CDS BCAM1429 NC_011001.1 1591406 1593061 R IclR family regulatory protein complement(1591406..1593061) Burkholderia cenocepacia J2315 6929084 YP_002234045.1 CDS BCAM1430 NC_011001.1 1593239 1594198 D metallo-beta-lactamase superfamily protein 1593239..1594198 Burkholderia cenocepacia J2315 6929085 YP_002234046.1 CDS BCAM1431 NC_011001.1 1594385 1595737 D major facilitator superfamily protein 1594385..1595737 Burkholderia cenocepacia J2315 6929086 YP_002234047.1 CDS BCAM1432 NC_011001.1 1595832 1597196 D major facilitator superfamily protein 1595832..1597196 Burkholderia cenocepacia J2315 6929087 YP_002234048.1 CDS BCAM1433 NC_011001.1 1597178 1598023 R putative short chain dehydrogenase complement(1597178..1598023) Burkholderia cenocepacia J2315 6929088 YP_002234049.1 CDS BCAM1434 NC_011001.1 1598111 1599070 D putative regulatory protein 1598111..1599070 Burkholderia cenocepacia J2315 6929089 YP_002234050.1 CDS BCAM1435 NC_011001.1 1599149 1600297 D putative hydrolase 1599149..1600297 Burkholderia cenocepacia J2315 6929090 YP_002234051.1 CDS BCAM1436 NC_011001.1 1600406 1600897 R putative dioxygenase complement(1600406..1600897) Burkholderia cenocepacia J2315 6929091 YP_002234052.1 CDS BCAM1437 NC_011001.1 1601069 1601539 D MarR family regulatory protein 1601069..1601539 Burkholderia cenocepacia J2315 6929092 YP_002234053.1 CDS BCAM1438 NC_011001.1 1601577 1601912 D hypothetical protein 1601577..1601912 Burkholderia cenocepacia J2315 6929093 YP_002234054.1 CDS BCAM1439 NC_011001.1 1601909 1603150 D major facilitator superfamily protein 1601909..1603150 Burkholderia cenocepacia J2315 6929094 YP_002234055.1 CDS BCAM1440 NC_011001.1 1603169 1604119 R LysR family regulatory protein complement(1603169..1604119) Burkholderia cenocepacia J2315 6929095 YP_002234056.1 CDS BCAM1441 NC_011001.1 1604225 1605580 D catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1604225..1605580 Burkholderia cenocepacia J2315 6929096 YP_002234057.1 CDS BCAM1442 NC_011001.1 1605630 1607147 D putative methylmalonate-semialdehyde dehydrogenase 1605630..1607147 Burkholderia cenocepacia J2315 6929097 YP_002234058.1 CDS BCAM1443 NC_011001.1 1607276 1607650 R hypothetical protein complement(1607276..1607650) Burkholderia cenocepacia J2315 6929098 YP_002234059.1 CDS BCAM1444 NC_011001.1 1607934 1608866 R hypothetical protein complement(1607934..1608866) Burkholderia cenocepacia J2315 6929099 YP_002234060.1 CDS BCAM1445 NC_011001.1 1608995 1610005 R putative transporter complement(1608995..1610005) Burkholderia cenocepacia J2315 6929100 YP_002234061.1 CDS BCAM1446 NC_011001.1 1610101 1610985 R LysR family regulatory protein complement(1610101..1610985) Burkholderia cenocepacia J2315 6929101 YP_002234062.1 CDS BCAM1447 NC_011001.1 1611361 1611738 D hypothetical protein 1611361..1611738 Burkholderia cenocepacia J2315 6929102 YP_002234063.1 CDS BCAM1448 NC_011001.1 1611763 1612563 R LuxR superfamily regulatory protein complement(1611763..1612563) Burkholderia cenocepacia J2315 6929103 YP_002234064.1 CDS BCAM1449A NC_011001.1 1612694 1614100 D putative amino acid permease 1612694..1614100 Burkholderia cenocepacia J2315 6929104 YP_002234065.1 CDS bapA NC_011001.1 1614165 1615274 D beta-alanine specific aminopeptidase 1614165..1615274 Burkholderia cenocepacia J2315 6929105 YP_002234066.1 CDS BCAM1451 NC_011001.1 1615413 1615625 R hypothetical protein complement(1615413..1615625) Burkholderia cenocepacia J2315 6930362 YP_002234067.1 CDS BCAM1452 NC_011001.1 1615762 1617945 R Similar over its internal region to Burkholderia cepacia (Pseudomonas cepacia) fusaric acid resistance protein FusC.; putative fusaric acid resistance transporter protein complement(1615762..1617945) Burkholderia cenocepacia J2315 6929106 YP_002234068.1 CDS BCAM1453 NC_011001.1 1618134 1619081 D LysR family regulatory protein 1618134..1619081 Burkholderia cenocepacia J2315 6929107 YP_002234069.1 CDS BCAM1454 NC_011001.1 1619192 1619494 R hypothetical protein complement(1619192..1619494) Burkholderia cenocepacia J2315 6929108 YP_002234070.1 CDS BCAM1455 NC_011001.1 1619725 1620867 R putative porin complement(1619725..1620867) Burkholderia cenocepacia J2315 6929109 YP_002234071.1 CDS codA NC_011001.1 1621208 1622449 D cytosine deaminase 1621208..1622449 Burkholderia cenocepacia J2315 6929110 YP_002234072.1 CDS BCAM1458 NC_011001.1 1622615 1623940 D putative voltage-gated chloride channel 1622615..1623940 Burkholderia cenocepacia J2315 6930425 YP_002234073.1 CDS atoE NC_011001.1 1624159 1625481 D short-chain fatty acid transporter 1624159..1625481 Burkholderia cenocepacia J2315 6929111 YP_002234074.1 CDS BCAM1460 NC_011001.1 1625546 1626874 R major facilitator superfamily protein complement(1625546..1626874) Burkholderia cenocepacia J2315 6930360 YP_002234075.1 CDS BCAM1461 NC_011001.1 1627098 1628030 R hypothetical protein complement(1627098..1628030) Burkholderia cenocepacia J2315 6929112 YP_002234076.1 CDS BCAM1462 NC_011001.1 1628066 1628872 R short chain dehydrogenase complement(1628066..1628872) Burkholderia cenocepacia J2315 6929113 YP_002234077.1 CDS BCAM1463 NC_011001.1 1628946 1629656 R GntR family regulatory protein complement(1628946..1629656) Burkholderia cenocepacia J2315 6929114 YP_002234078.1 CDS BCAM1464 NC_011001.1 1629943 1630443 D hypothetical protein 1629943..1630443 Burkholderia cenocepacia J2315 6929115 YP_002234079.1 CDS BCAM1465 NC_011001.1 1630440 1630892 D hypothetical protein 1630440..1630892 Burkholderia cenocepacia J2315 6929116 YP_002234080.1 CDS BCAM1466 NC_011001.1 1630947 1631738 R IclR family regulatory protein complement(1630947..1631738) Burkholderia cenocepacia J2315 6929117 YP_002234081.1 CDS BCAM1467 NC_011001.1 1631898 1632674 D periplasmic solute-binding protein 1631898..1632674 Burkholderia cenocepacia J2315 6929118 YP_002234082.1 CDS BCAM1468 NC_011001.1 1632763 1633419 D ABC transporter permease 1632763..1633419 Burkholderia cenocepacia J2315 6929119 YP_002234083.1 CDS BCAM1469 NC_011001.1 1633416 1634171 D ABC transporter ATP-binding protein 1633416..1634171 Burkholderia cenocepacia J2315 6929120 YP_002234084.1 CDS BCAM1470 NC_011001.1 1634168 1635478 D putative FAD-binding oxidoreductase 1634168..1635478 Burkholderia cenocepacia J2315 6929121 YP_002234085.1 CDS BCAM1472 NC_011001.1 1635698 1636966 D putative glycosyltransferase 1635698..1636966 Burkholderia cenocepacia J2315 6929122 YP_002234086.1 CDS BCAM1473 NC_011001.1 1637020 1638438 R putative di-haem cytochrome c peroxidase complement(1637020..1638438) Burkholderia cenocepacia J2315 6929123 YP_002234087.1 CDS BCAM1474 NC_011001.1 1638534 1640207 R phosphoesterase family protein complement(1638534..1640207) Burkholderia cenocepacia J2315 6929124 YP_002234088.1 CDS BCAM1475 NC_011001.1 1640598 1641464 D hypothetical protein 1640598..1641464 Burkholderia cenocepacia J2315 6929125 YP_002234089.1 CDS lrp NC_011001.1 1641490 1641963 R AnsC family regulatory protein complement(1641490..1641963) Burkholderia cenocepacia J2315 6929126 YP_002234090.1 CDS aroP NC_011001.1 1642283 1643668 D aromatic amino acid transport protein 1642283..1643668 Burkholderia cenocepacia J2315 6930530 YP_002234091.1 CDS tyrB NC_011001.1 1643715 1644917 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1643715..1644917 Burkholderia cenocepacia J2315 6930355 YP_002234092.1 CDS BCAM1479 NC_011001.1 1645075 1645473 D hypothetical protein 1645075..1645473 Burkholderia cenocepacia J2315 6930656 YP_002234093.1 CDS BCAM1480 NC_011001.1 1645590 1645880 D hypothetical protein 1645590..1645880 Burkholderia cenocepacia J2315 6929127 YP_002234094.1 CDS BCAM1481 NC_011001.1 1645897 1646136 D hypothetical protein 1645897..1646136 Burkholderia cenocepacia J2315 6929128 YP_002234095.1 CDS BCAM1482 NC_011001.1 1646246 1646641 D hypothetical protein 1646246..1646641 Burkholderia cenocepacia J2315 6929129 YP_002234096.1 CDS BCAM1483 NC_011001.1 1646664 1647443 R cyclic nucleotide-binding transcriptional regulator complement(1646664..1647443) Burkholderia cenocepacia J2315 6929130 YP_002234097.1 CDS BCAM1484 NC_011001.1 1647460 1647864 R two-component regulatory system response regulator protein complement(1647460..1647864) Burkholderia cenocepacia J2315 6929131 YP_002234098.1 CDS BCAM1485 NC_011001.1 1648034 1648969 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(1648034..1648969) Burkholderia cenocepacia J2315 6929132 YP_002234099.1 CDS BCAM1486 NC_011001.1 1649233 1649970 D GntR family regulatory protein 1649233..1649970 Burkholderia cenocepacia J2315 6929133 YP_002234100.1 CDS BCAM1487 NC_011001.1 1650098 1651219 D putative ABC transporter substrate-binding protein 1650098..1651219 Burkholderia cenocepacia J2315 6929134 YP_002234101.1 CDS BCAM1488 NC_011001.1 1651288 1652295 D putative proline racemase 1651288..1652295 Burkholderia cenocepacia J2315 6929135 YP_002234102.1 CDS BCAM1489 NC_011001.1 1652526 1655057 D putative penicillin-binding protein 1652526..1655057 Burkholderia cenocepacia J2315 6929136 YP_002234103.1 CDS BCAM1490 NC_011001.1 1655098 1656015 D hypothetical protein 1655098..1656015 Burkholderia cenocepacia J2315 6929137 YP_002234104.1 CDS BCAM1491 NC_011001.1 1656241 1656570 D hypothetical protein 1656241..1656570 Burkholderia cenocepacia J2315 6929138 YP_002234105.1 CDS BCAM1492 NC_011001.1 1656937 1657341 D hypothetical protein 1656937..1657341 Burkholderia cenocepacia J2315 6929139 YP_002234106.1 CDS BCAM1493 NC_011001.1 1657382 1658029 R two-component regulatory system response regulator protein complement(1657382..1658029) Burkholderia cenocepacia J2315 6929140 YP_002234107.1 CDS BCAM1494 NC_011001.1 1658026 1660128 R two-component regulatory system sensor kinase complement(1658026..1660128) Burkholderia cenocepacia J2315 6929141 YP_002234108.1 CDS BCAM1495 NC_011001.1 1660439 1660909 D putative universal stress protein 1660439..1660909 Burkholderia cenocepacia J2315 6929142 YP_002234109.1 CDS BCAM1496 NC_011001.1 1661219 1661725 D hypothetical protein 1661219..1661725 Burkholderia cenocepacia J2315 6929143 YP_002234110.1 CDS BCAM1497 NC_011001.1 1661911 1662936 D hypothetical protein 1661911..1662936 Burkholderia cenocepacia J2315 6929144 YP_002234111.1 CDS BCAM1500 NC_011001.1 1664978 1665913 D putative universal stress protein 1664978..1665913 Burkholderia cenocepacia J2315 6929146 YP_002234112.1 CDS BCAM1501 NC_011001.1 1666389 1666823 R hypothetical protein complement(1666389..1666823) Burkholderia cenocepacia J2315 6929147 YP_002234113.1 CDS BCAM1502 NC_011001.1 1667369 1667623 D hypothetical protein 1667369..1667623 Burkholderia cenocepacia J2315 6929148 YP_002234114.1 CDS BCAM1503 NC_011001.1 1667823 1669622 D putative methyl-accepting chemotaxis protein 1667823..1669622 Burkholderia cenocepacia J2315 6929149 YP_002234115.1 CDS BCAM1504 NC_011001.1 1669651 1670925 R putative sigma-54 interacting transcriptional regulator complement(1669651..1670925) Burkholderia cenocepacia J2315 6929150 YP_002234116.1 CDS BCAM1505 NC_011001.1 1671083 1673065 D hybrid two-component system kinase-response regulator protein 1671083..1673065 Burkholderia cenocepacia J2315 6929151 YP_002234117.1 CDS BCAM1506 NC_011001.1 1673131 1673541 D putative transport protein; putative phospholipid-binding lipoprotein 1673131..1673541 Burkholderia cenocepacia J2315 6929152 YP_002234118.1 CDS BCAM1507 NC_011001.1 1673621 1674166 D hypothetical protein 1673621..1674166 Burkholderia cenocepacia J2315 6929153 YP_002234119.1 CDS BCAM1508 NC_011001.1 1674216 1674842 D hypothetical protein 1674216..1674842 Burkholderia cenocepacia J2315 6929154 YP_002234120.1 CDS BCAM1509 NC_011001.1 1674865 1675368 R putative PRC-barrel domain-containing protein complement(1674865..1675368) Burkholderia cenocepacia J2315 6929155 YP_002234121.1 CDS BCAM1510 NC_011001.1 1675469 1675900 R putative CBS-domain-containing protein complement(1675469..1675900) Burkholderia cenocepacia J2315 6929156 YP_002234122.1 CDS BCAM1511 NC_011001.1 1676237 1676485 R hypothetical protein complement(1676237..1676485) Burkholderia cenocepacia J2315 6929157 YP_002234123.1 CDS BCAM1512 NC_011001.1 1676620 1676919 D hypothetical protein 1676620..1676919 Burkholderia cenocepacia J2315 6929158 YP_002234124.1 CDS BCAM1513 NC_011001.1 1677022 1677546 D hypothetical protein 1677022..1677546 Burkholderia cenocepacia J2315 6929159 YP_002234125.1 CDS BCAM1514 NC_011001.1 1677750 1678631 D putative outer membrane protein 1677750..1678631 Burkholderia cenocepacia J2315 6929160 YP_002234126.1 CDS BCAM1515 NC_011001.1 1678728 1680422 D hypothetical protein 1678728..1680422 Burkholderia cenocepacia J2315 6929161 YP_002234127.1 CDS BCAM1516A NC_011001.1 1680419 1682719 D hypothetical protein 1680419..1682719 Burkholderia cenocepacia J2315 6929162 YP_002234128.1 CDS BCAM1517 NC_011001.1 1682738 1683511 R IclR family regulatory protein complement(1682738..1683511) Burkholderia cenocepacia J2315 6929163 YP_002234129.1 CDS BCAM1518 NC_011001.1 1683941 1684312 R hypothetical protein complement(1683941..1684312) Burkholderia cenocepacia J2315 6929164 YP_002234130.1 CDS BCAM1519 NC_011001.1 1684671 1685972 R putative UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(1684671..1685972) Burkholderia cenocepacia J2315 6929165 YP_002234131.1 CDS BCAM1520 NC_011001.1 1686225 1686953 D putative restriction endonuclease 1686225..1686953 Burkholderia cenocepacia J2315 6929166 YP_002234132.1 CDS shiA NC_011001.1 1686986 1688293 R shikimate transporter complement(1686986..1688293) Burkholderia cenocepacia J2315 6929167 YP_002234133.1 CDS BCAM1522 NC_011001.1 1688652 1689779 D putative dioxygenase 1688652..1689779 Burkholderia cenocepacia J2315 6930638 YP_002234134.1 CDS BCAM1523 NC_011001.1 1689784 1691019 R putative NADH:flavin oxidoreductase complement(1689784..1691019) Burkholderia cenocepacia J2315 6929168 YP_002234135.1 CDS BCAM1524 NC_011001.1 1691221 1692345 R putative riboflavin biosynthesis protein complement(1691221..1692345) Burkholderia cenocepacia J2315 6929169 YP_002234136.1 CDS BCAM1525 NC_011001.1 1692342 1693280 R family S9 unassigned serine peptidase; putative hydrolase complement(1692342..1693280) Burkholderia cenocepacia J2315 6929170 YP_002234137.1 CDS BCAM1526 NC_011001.1 1693563 1694753 D LuxR superfamily regulatory protein 1693563..1694753 Burkholderia cenocepacia J2315 6929171 YP_002234138.1 CDS BCAM1527 NC_011001.1 1694949 1695614 R putative cation efflux protein complement(1694949..1695614) Burkholderia cenocepacia J2315 6929172 YP_002234139.1 CDS BCAM1528 NC_011001.1 1696022 1696618 D hypothetical protein 1696022..1696618 Burkholderia cenocepacia J2315 6929173 YP_002234140.1 CDS BCAM1529 NC_011001.1 1696625 1697554 D putative hydrolase 1696625..1697554 Burkholderia cenocepacia J2315 6929174 YP_002234141.1 CDS BCAM1530 NC_011001.1 1697529 1699121 R putative peptidase complement(1697529..1699121) Burkholderia cenocepacia J2315 6929175 YP_002234142.1 CDS BCAM1531 NC_011001.1 1699124 1699495 R putative lipoprotein complement(1699124..1699495) Burkholderia cenocepacia J2315 6929176 YP_002234143.1 CDS BCAM1532 NC_011001.1 1699666 1700313 R two-component regulatory system response regulator protein complement(1699666..1700313) Burkholderia cenocepacia J2315 6929177 YP_002234144.1 CDS BCAM1533 NC_011001.1 1700310 1701767 R two-component regulatory system sensor kinase complement(1700310..1701767) Burkholderia cenocepacia J2315 6929178 YP_002234145.1 CDS BCAM1534 NC_011001.1 1702057 1703076 D hypothetical protein 1702057..1703076 Burkholderia cenocepacia J2315 6929179 YP_002234146.1 CDS BCAM1535 NC_011001.1 1703160 1704731 R putative lipoprotein complement(1703160..1704731) Burkholderia cenocepacia J2315 6929180 YP_002234147.1 CDS BCAM1536 NC_011001.1 1705036 1705656 D TetR family regulatory protein 1705036..1705656 Burkholderia cenocepacia J2315 6929181 YP_002234148.1 CDS BCAM1537 NC_011001.1 1705891 1706949 D putative dehydrogenase zinc-binding subunit 1705891..1706949 Burkholderia cenocepacia J2315 6929182 YP_002234149.1 CDS BCAM1538 NC_011001.1 1707043 1707342 D putative dehydrogenase monooxygenase subunit 1707043..1707342 Burkholderia cenocepacia J2315 6929183 YP_002234150.1 CDS BCAM1539 NC_011001.1 1707493 1707948 D putative dehydrogenase iron-sulfur cluster subunit 1707493..1707948 Burkholderia cenocepacia J2315 6929184 YP_002234151.1 CDS BCAM1540 NC_011001.1 1707950 1710169 D putative dehydrogenase molybdopterin binding subunit 1707950..1710169 Burkholderia cenocepacia J2315 6929185 YP_002234152.1 CDS BCAM1541 NC_011001.1 1710185 1711489 D putative dehydrogenase, cytochrome C subunit 1710185..1711489 Burkholderia cenocepacia J2315 6929186 YP_002234153.1 CDS BCAM1542 NC_011001.1 1711643 1713088 D putative aldehyde dehydrogenase 1711643..1713088 Burkholderia cenocepacia J2315 6929187 YP_002234154.1 CDS BCAM1543 NC_011001.1 1713286 1714053 R putative glycosyltransferase complement(1713286..1714053) Burkholderia cenocepacia J2315 6929188 YP_002234155.1 CDS BCAM1543B NC_011001.1 1714200 1714577 D Possible gene remnant. Similar to Rhizobium sp. (strain ngr234) probable conjugal transfer protein TraC UniProt:P55419 (EMBL:U00090 (102 aa) fasta scores: E()=7.3, 32.530% id in 83 aa, and to the N-terminal region of Burkholderia pseudomallei (strain 1710b) LigA UniProt:Q3JHX0 (EMBL:CP000125 (682 aa) fasta scores: E()=1.8, 29.688% id in 128 aa; hypothetical protein 1714200..1714577 Burkholderia cenocepacia J2315 6929189 YP_002234156.1 CDS BCAM1544 NC_011001.1 1715539 1716969 R putative amidase complement(1715539..1716969) Burkholderia cenocepacia J2315 6929191 YP_002234157.1 CDS BCAM1545 NC_011001.1 1717132 1718151 R LuxR superfamily regulatory protein complement(1717132..1718151) Burkholderia cenocepacia J2315 6929192 YP_002234158.1 CDS BCAM1546 NC_011001.1 1718424 1719236 D hypothetical protein 1718424..1719236 Burkholderia cenocepacia J2315 6929193 YP_002234159.1 CDS BCAM1547 NC_011001.1 1719346 1719792 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1719346..1719792 Burkholderia cenocepacia J2315 6929194 YP_002234160.1 CDS BCAM1548 NC_011001.1 1719836 1720414 D hypothetical protein 1719836..1720414 Burkholderia cenocepacia J2315 6929195 YP_002234161.1 CDS BCAM1549 NC_011001.1 1720650 1721846 D putative porin 1720650..1721846 Burkholderia cenocepacia J2315 6929196 YP_002234162.1 CDS BCAM1550 NC_011001.1 1722253 1722744 D putative peptidoglycan-associated lipoprotein 1722253..1722744 Burkholderia cenocepacia J2315 6929197 YP_002234163.1 CDS BCAM1551 NC_011001.1 1723142 1724401 R putative dehydrogenase, cytochrome C subunit complement(1723142..1724401) Burkholderia cenocepacia J2315 6929198 YP_002234164.1 CDS BCAM1552 NC_011001.1 1724398 1725102 R putative dehydrogenase iron-sulfur binding subunit complement(1724398..1725102) Burkholderia cenocepacia J2315 6929199 YP_002234165.1 CDS BCAM1553 NC_011001.1 1725099 1727975 R putative dehydrogenase molybdenum-binding subunit complement(1725099..1727975) Burkholderia cenocepacia J2315 6929200 YP_002234166.1 CDS BCAM1554 NC_011001.1 1728441 1729991 D putative diguanylate cyclase 1728441..1729991 Burkholderia cenocepacia J2315 6929201 YP_002234167.1 CDS BCAM1555 NC_011001.1 1730245 1730520 D hypothetical protein 1730245..1730520 Burkholderia cenocepacia J2315 6929202 YP_002234168.1 CDS BCAM1556 NC_011001.1 1730768 1731799 D putative succinylglutamate desuccinylase/ aspartoacylase 1730768..1731799 Burkholderia cenocepacia J2315 6929203 YP_002234169.1 CDS BCAM1557 NC_011001.1 1731858 1732928 R hypothetical protein complement(1731858..1732928) Burkholderia cenocepacia J2315 6929204 YP_002234170.1 CDS rdgC NC_011001.1 1733166 1734089 D Required for efficient pilin antigenic variation; recombination associated protein 1733166..1734089 Burkholderia cenocepacia J2315 6929205 YP_002234171.1 CDS BCAM1559 NC_011001.1 1734562 1735122 D putative acetyltransferase 1734562..1735122 Burkholderia cenocepacia J2315 6929206 YP_002234172.1 CDS BCAM1560 NC_011001.1 1735189 1736142 D putative solute-binding protein 1735189..1736142 Burkholderia cenocepacia J2315 6929207 YP_002234173.1 CDS BCAM1561 NC_011001.1 1736196 1737245 D putative luciferase-like monooxygenase 1736196..1737245 Burkholderia cenocepacia J2315 6929208 YP_002234174.1 CDS BCAM1562 NC_011001.1 1737256 1738608 D putative monooxygenase 1737256..1738608 Burkholderia cenocepacia J2315 6929209 YP_002234175.1 CDS BCAM1563 NC_011001.1 1738671 1740470 D ABC transporter ATP-binding membrane protein 1738671..1740470 Burkholderia cenocepacia J2315 6929210 YP_002234176.1 CDS BCAM1564 NC_011001.1 1740505 1741437 D putative solute-binding protein 1740505..1741437 Burkholderia cenocepacia J2315 6929211 YP_002234177.1 CDS BCAM1565 NC_011001.1 1741516 1742610 R putative monooxygenase complement(1741516..1742610) Burkholderia cenocepacia J2315 6929212 YP_002234178.1 CDS BCAM1566 NC_011001.1 1742672 1743640 R putative substrate-binding protein complement(1742672..1743640) Burkholderia cenocepacia J2315 6929213 YP_002234179.1 CDS BCAM1567 NC_011001.1 1743941 1744858 D family S33 serine peptidase; putative hydrolase 1743941..1744858 Burkholderia cenocepacia J2315 6929214 YP_002234180.1 CDS BCAM1568 NC_011001.1 1744855 1745286 D MarR family regulatory protein 1744855..1745286 Burkholderia cenocepacia J2315 6929215 YP_002234181.1 CDS BCAM1569 NC_011001.1 1745737 1747182 D putative BNR/Asp-box protein 1745737..1747182 Burkholderia cenocepacia J2315 6929216 YP_002234182.1 CDS adhA NC_011001.1 1747253 1748281 R alcohol dehydrogenase complement(1747253..1748281) Burkholderia cenocepacia J2315 6929217 YP_002234183.1 CDS BCAM1571 NC_011001.1 1748694 1750778 D TonB-dependent receptor 1748694..1750778 Burkholderia cenocepacia J2315 6930334 YP_002234184.1 CDS BCAM1572 NC_011001.1 1751246 1752865 D methyl-accepting chemotaxis protein 1751246..1752865 Burkholderia cenocepacia J2315 6929218 YP_002234185.1 CDS otsA NC_011001.1 1753506 1754912 D alpha,alpha-trehalose-phosphate synthase 1753506..1754912 Burkholderia cenocepacia J2315 6929219 YP_002234186.1 CDS BCAM1575 NC_011001.1 1755164 1757140 R family M41 metallo peptidase; putative cell division-related metallo peptidase complement(1755164..1757140) Burkholderia cenocepacia J2315 6930577 YP_002234187.1 CDS BCAM1576 NC_011001.1 1757612 1759276 D phosphoesterase family protein 1757612..1759276 Burkholderia cenocepacia J2315 6929220 YP_002234188.1 CDS BCAM1577 NC_011001.1 1759361 1760857 R hypothetical protein complement(1759361..1760857) Burkholderia cenocepacia J2315 6929221 YP_002234189.1 CDS BCAM1577A NC_011001.1 1761122 1761457 R Doubtful CDS; hypothetical protein complement(1761122..1761457) Burkholderia cenocepacia J2315 6929222 YP_002234190.1 CDS BCAM1578 NC_011001.1 1761792 1762208 D hypothetical protein 1761792..1762208 Burkholderia cenocepacia J2315 6929223 YP_002234191.1 CDS BCAM1579 NC_011001.1 1762479 1763387 D NAD-dependent epimerase/dehydratase 1762479..1763387 Burkholderia cenocepacia J2315 6929224 YP_002234192.1 CDS BCAM1580 NC_011001.1 1763617 1765242 R hypothetical protein complement(1763617..1765242) Burkholderia cenocepacia J2315 6929225 YP_002234193.1 CDS pckG NC_011001.1 1765562 1767412 R catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase complement(1765562..1767412) Burkholderia cenocepacia J2315 6929226 YP_002234194.1 CDS BCAM1582 NC_011001.1 1767954 1768730 R 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase complement(1767954..1768730) Burkholderia cenocepacia J2315 6930594 YP_002234195.1 CDS BCAM1583 NC_011001.1 1768820 1769575 R short-chain dehydrogenase complement(1768820..1769575) Burkholderia cenocepacia J2315 6929227 YP_002234196.1 CDS BCAM1584 NC_011001.1 1769586 1770452 R short-chain dehydrogenase complement(1769586..1770452) Burkholderia cenocepacia J2315 6929228 YP_002234197.1 CDS BCAM1585 NC_011001.1 1770479 1770979 R putative bile acid 7-alpha dehydratase complement(1770479..1770979) Burkholderia cenocepacia J2315 6929229 YP_002234198.1 CDS BCAM1586 NC_011001.1 1771192 1771704 D putative bile acid 7-alpha dehydratase 1771192..1771704 Burkholderia cenocepacia J2315 6929230 YP_002234199.1 CDS BCAM1587 NC_011001.1 1771757 1772473 D hypothetical protein 1771757..1772473 Burkholderia cenocepacia J2315 6929231 YP_002234200.1 CDS BCAM1588 NC_011001.1 1772546 1774129 R Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase complement(1772546..1774129) Burkholderia cenocepacia J2315 6929232 YP_002234201.1 CDS BCAM1589 NC_011001.1 1774535 1775056 D putative oligo-nucleotide binding protein 1774535..1775056 Burkholderia cenocepacia J2315 6929233 YP_002234202.1 CDS BCAM1590 NC_011001.1 1775053 1775691 D putative DNA-binding protein 1775053..1775691 Burkholderia cenocepacia J2315 6929234 YP_002234203.1 CDS BCAM1591 NC_011001.1 1775757 1776731 D catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase 1775757..1776731 Burkholderia cenocepacia J2315 6929235 YP_002234204.1 CDS BCAM1591A NC_011001.1 1776849 1777097 D hypothetical protein 1776849..1777097 Burkholderia cenocepacia J2315 6929236 YP_002234205.1 CDS BCAM1592 NC_011001.1 1777121 1777945 R short-chain dehydrogenase complement(1777121..1777945) Burkholderia cenocepacia J2315 6929237 YP_002234206.1 CDS BCAM1593 NC_011001.1 1778768 1780696 D vitamin B12 transporter BtuB precursor 1778768..1780696 Burkholderia cenocepacia J2315 6930366 YP_002234207.1 CDS BCAM1594 NC_011001.1 1780804 1781376 D hypothetical protein 1780804..1781376 Burkholderia cenocepacia J2315 6929239 YP_002234208.1 CDS BCAM1595 NC_011001.1 1781399 1782409 D family S9 unassigned serine peptidase; putative esterase 1781399..1782409 Burkholderia cenocepacia J2315 6929240 YP_002234209.1 CDS BCAM1596 NC_011001.1 1782467 1783099 R LysE family transporter complement(1782467..1783099) Burkholderia cenocepacia J2315 6929241 YP_002234210.1 CDS BCAM1597 NC_011001.1 1783216 1783677 D AsnC family regulatory protein 1783216..1783677 Burkholderia cenocepacia J2315 6929242 YP_002234211.1 CDS BCAM1598 NC_011001.1 1783790 1785088 R putative lipoprotein complement(1783790..1785088) Burkholderia cenocepacia J2315 6929243 YP_002234212.1 CDS BCAM1600 NC_011001.1 1785332 1785679 R hypothetical protein complement(1785332..1785679) Burkholderia cenocepacia J2315 6929244 YP_002234213.1 CDS BCAM1601 NC_011001.1 1785732 1786523 R hypothetical protein complement(1785732..1786523) Burkholderia cenocepacia J2315 6929245 YP_002234214.1 CDS BCAM1602 NC_011001.1 1786520 1787164 R hypothetical protein complement(1786520..1787164) Burkholderia cenocepacia J2315 6929246 YP_002234215.1 CDS BCAM1603 NC_011001.1 1787332 1787631 R hypothetical protein complement(1787332..1787631) Burkholderia cenocepacia J2315 6929247 YP_002234216.1 CDS BCAM1604 NC_011001.1 1787849 1788097 R hypothetical protein complement(1787849..1788097) Burkholderia cenocepacia J2315 6929248 YP_002234217.1 CDS BCAM1605 NC_011001.1 1788316 1788843 R putative phenylacetic acid degradation protein complement(1788316..1788843) Burkholderia cenocepacia J2315 6929249 YP_002234218.1 CDS BCAM1606 NC_011001.1 1788846 1789790 R electron transfer flavoprotein subunit alpha complement(1788846..1789790) Burkholderia cenocepacia J2315 6929250 YP_002234219.1 CDS BCAM1607 NC_011001.1 1789807 1790556 R electron transfer flavoprotein subunit beta complement(1789807..1790556) Burkholderia cenocepacia J2315 6929251 YP_002234220.1 CDS BCAM1608 NC_011001.1 1790594 1791421 R putative catabolic dehydrogenase complement(1790594..1791421) Burkholderia cenocepacia J2315 6929252 YP_002234221.1 CDS BCAM1609 NC_011001.1 1791428 1792264 R family S33 serine peptidase; putative catabolic hydrolase complement(1791428..1792264) Burkholderia cenocepacia J2315 6929253 YP_002234222.1 CDS BCAM1610 NC_011001.1 1792402 1793181 D short chain dehydrogenase 1792402..1793181 Burkholderia cenocepacia J2315 6929254 YP_002234223.1 CDS BCAM1611 NC_011001.1 1793337 1794902 D hypothetical protein 1793337..1794902 Burkholderia cenocepacia J2315 6929255 YP_002234224.1 CDS BCAM1612 NC_011001.1 1794943 1796325 D hypothetical protein 1794943..1796325 Burkholderia cenocepacia J2315 6929256 YP_002234225.1 CDS BCAM1613 NC_011001.1 1796425 1797207 D putative 2-hydroxypent-2,4-dienoate hydratase 1796425..1797207 Burkholderia cenocepacia J2315 6929257 YP_002234226.1 CDS mhpF NC_011001.1 1797221 1798120 D catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 1797221..1798120 Burkholderia cenocepacia J2315 6929258 YP_002234227.1 CDS bphI NC_011001.1 1798137 1799168 D catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 1798137..1799168 Burkholderia cenocepacia J2315 6930552 YP_002234228.1 CDS BCAM1616 NC_011001.1 1799338 1800717 D major facilitator superfamily protein 1799338..1800717 Burkholderia cenocepacia J2315 6930400 YP_002234229.1 CDS BCAM1617 NC_011001.1 1800824 1800994 R hypothetical protein complement(1800824..1800994) Burkholderia cenocepacia J2315 6929259 YP_002234230.1 CDS infA2 NC_011001.1 1801409 1801672 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(1801409..1801672) Burkholderia cenocepacia J2315 6929260 YP_002234231.1 CDS BCAM1619 NC_011001.1 1802137 1802340 R putative DNA-binding cold-shock protein complement(1802137..1802340) Burkholderia cenocepacia J2315 6930514 YP_002234232.1 CDS BCAM1620 NC_011001.1 1802630 1803709 R Rieske iron-sulphur domain-containing protein complement(1802630..1803709) Burkholderia cenocepacia J2315 6929261 YP_002234233.1 CDS BCAM1621 NC_011001.1 1803777 1806236 R hypothetical protein complement(1803777..1806236) Burkholderia cenocepacia J2315 6929262 YP_002234234.1 CDS BCAM1622 NC_011001.1 1806330 1807292 R BNR/Asp-box repeat protein complement(1806330..1807292) Burkholderia cenocepacia J2315 6929263 YP_002234235.1 CDS BCAM1623 NC_011001.1 1807452 1808657 R thiolase complement(1807452..1808657) Burkholderia cenocepacia J2315 6929264 YP_002234236.1 CDS BCAM1624 NC_011001.1 1808681 1809166 R MaoC-like dehydratase complement(1808681..1809166) Burkholderia cenocepacia J2315 6929265 YP_002234237.1 CDS BCAM1625 NC_011001.1 1809166 1809966 R short chain dehydrogenase complement(1809166..1809966) Burkholderia cenocepacia J2315 6929266 YP_002234238.1 CDS BCAM1626 NC_011001.1 1809963 1811165 R acyl-CoA dehydrogenase complement(1809963..1811165) Burkholderia cenocepacia J2315 6929267 YP_002234239.1 CDS BCAM1627 NC_011001.1 1811162 1812400 R acyl-CoA dehydrogenase complement(1811162..1812400) Burkholderia cenocepacia J2315 6929268 YP_002234240.1 CDS BCAM1628 NC_011001.1 1812404 1813282 R short chain dehydrogenase complement(1812404..1813282) Burkholderia cenocepacia J2315 6929269 YP_002234241.1 CDS BCAM1629 NC_011001.1 1813324 1814475 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(1813324..1814475) Burkholderia cenocepacia J2315 6929270 YP_002234242.1 CDS BCAM1630 NC_011001.1 1814472 1815542 R acyl-CoA dehydrogenase complement(1814472..1815542) Burkholderia cenocepacia J2315 6929271 YP_002234243.1 CDS BCAM1631 NC_011001.1 1815576 1816745 R acyl-CoA dehydrogenase complement(1815576..1816745) Burkholderia cenocepacia J2315 6929272 YP_002234244.1 CDS BCAM1632 NC_011001.1 1816742 1817557 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1816742..1817557) Burkholderia cenocepacia J2315 6929273 YP_002234245.1 CDS BCAM1633 NC_011001.1 1817577 1818677 R putative 2-nitropropane dioxygenase complement(1817577..1818677) Burkholderia cenocepacia J2315 6929274 YP_002234246.1 CDS BCAM1634 NC_011001.1 1818674 1819594 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1818674..1819594) Burkholderia cenocepacia J2315 6929275 YP_002234247.1 CDS BCAM1635 NC_011001.1 1819603 1820400 R putative CoA-transferase complement(1819603..1820400) Burkholderia cenocepacia J2315 6929276 YP_002234248.1 CDS BCAM1636 NC_011001.1 1820411 1821304 R putative CoA-transferase complement(1820411..1821304) Burkholderia cenocepacia J2315 6929277 YP_002234249.1 CDS BCAM1637 NC_011001.1 1821314 1822210 R putative biphenyl-2,3-diol 1,2-dioxygenase complement(1821314..1822210) Burkholderia cenocepacia J2315 6929278 YP_002234250.1 CDS BCAM1638 NC_011001.1 1822470 1822886 R putative plasmid stability protein complement(1822470..1822886) Burkholderia cenocepacia J2315 6929279 YP_002234251.1 CDS BCAM1640 NC_011001.1 1823602 1824828 D putative acyltransferase 1823602..1824828 Burkholderia cenocepacia J2315 6929280 YP_002234252.1 CDS BCAM1641 NC_011001.1 1824839 1825579 R hypothetical protein complement(1824839..1825579) Burkholderia cenocepacia J2315 6929281 YP_002234253.1 CDS BCAM1642 NC_011001.1 1826165 1826938 R short chain dehydrogenase complement(1826165..1826938) Burkholderia cenocepacia J2315 6929282 YP_002234254.1 CDS BCAM1643 NC_011001.1 1826973 1828553 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(1826973..1828553) Burkholderia cenocepacia J2315 6929283 YP_002234255.1 CDS BCAM1644 NC_011001.1 1828598 1829647 R putative oxidoreductase complement(1828598..1829647) Burkholderia cenocepacia J2315 6929284 YP_002234256.1 CDS BCAM1645 NC_011001.1 1829663 1830181 R putative reductase component of oxidoreductase complement(1829663..1830181) Burkholderia cenocepacia J2315 6929285 YP_002234257.1 CDS BCAM1646 NC_011001.1 1830178 1831938 R putative FAD-binding component for oxidoreductase complement(1830178..1831938) Burkholderia cenocepacia J2315 6929286 YP_002234258.1 CDS BCAM1647 NC_011001.1 1831949 1833142 R putative acyl-CoA dehydrogenase complement(1831949..1833142) Burkholderia cenocepacia J2315 6929287 YP_002234259.1 CDS BCAM1648 NC_011001.1 1833306 1834445 R putative monooxygenase complement(1833306..1834445) Burkholderia cenocepacia J2315 6929288 YP_002234260.1 CDS BCAM1649 NC_011001.1 1834706 1835056 D putative glyoxalase/dioxygenase 1834706..1835056 Burkholderia cenocepacia J2315 6929289 YP_002234261.1 CDS BCAM1650 NC_011001.1 1835117 1835977 R LysR family regulatory protein complement(1835117..1835977) Burkholderia cenocepacia J2315 6929290 YP_002234262.1 CDS BCAM1651 NC_011001.1 1836135 1837523 D major facilitator superfamily protein 1836135..1837523 Burkholderia cenocepacia J2315 6929291 YP_002234263.1 CDS BCAM1652 NC_011001.1 1837533 1837913 R putative lipoprotein complement(1837533..1837913) Burkholderia cenocepacia J2315 6929292 YP_002234264.1 CDS BCAM1653 NC_011001.1 1838136 1839311 D LuxR superfamily regulatory protein 1838136..1839311 Burkholderia cenocepacia J2315 6929293 YP_002234265.1 CDS BCAM1654 NC_011001.1 1839423 1840178 D 3-oxoacyl-[acyl-carrier-protein] reductase 1839423..1840178 Burkholderia cenocepacia J2315 6929294 YP_002234266.1 CDS BCAM1655 NC_011001.1 1840209 1841471 D integrase 1840209..1841471 Burkholderia cenocepacia J2315 6929295 YP_002234267.1 CDS BCAM1656 NC_011001.1 1841599 1841817 R putative lipoprotein complement(1841599..1841817) Burkholderia cenocepacia J2315 6929296 YP_002234268.1 CDS BCAM1657 NC_011001.1 1841874 1843031 R hypothetical protein complement(1841874..1843031) Burkholderia cenocepacia J2315 6929297 YP_002234269.1 CDS BCAM1658 NC_011001.1 1843034 1844428 R hypothetical protein complement(1843034..1844428) Burkholderia cenocepacia J2315 6929298 YP_002234270.1 CDS BCAM1659 NC_011001.1 1844645 1845148 R hypothetical protein complement(1844645..1845148) Burkholderia cenocepacia J2315 6929299 YP_002234271.1 CDS BCAM1660 NC_011001.1 1845145 1845564 R hypothetical protein complement(1845145..1845564) Burkholderia cenocepacia J2315 6929300 YP_002234272.1 CDS BCAM1661 NC_011001.1 1845561 1846346 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(1845561..1846346) Burkholderia cenocepacia J2315 6929301 YP_002234273.1 CDS BCAM1662 NC_011001.1 1846573 1846872 R hypothetical protein complement(1846573..1846872) Burkholderia cenocepacia J2315 6929302 YP_002234274.1 CDS BCAM1663 NC_011001.1 1847196 1848881 D calcineurin-like phosphoesterase 1847196..1848881 Burkholderia cenocepacia J2315 6929303 YP_002234275.1 CDS BCAM1664 NC_011001.1 1849441 1850382 D hypothetical protein 1849441..1850382 Burkholderia cenocepacia J2315 6929305 YP_002234276.1 CDS BCAM1665 NC_011001.1 1850401 1851033 R LysE family transporter complement(1850401..1851033) Burkholderia cenocepacia J2315 6929306 YP_002234277.1 CDS BCAM1666 NC_011001.1 1851152 1852048 R LysR family regulatory protein complement(1851152..1852048) Burkholderia cenocepacia J2315 6929307 YP_002234278.1 CDS BCAM1667 NC_011001.1 1852373 1853236 D hypothetical protein 1852373..1853236 Burkholderia cenocepacia J2315 6929308 YP_002234279.1 CDS BCAM1668 NC_011001.1 1853660 1853917 D hypothetical protein 1853660..1853917 Burkholderia cenocepacia J2315 6929309 YP_002234280.1 CDS BCAM1669 NC_011001.1 1854190 1854489 D hypothetical protein 1854190..1854489 Burkholderia cenocepacia J2315 6929310 YP_002234281.1 CDS BCAM1670 NC_011001.1 1854567 1856339 R putative cyclic-di-GMP signaling protein complement(1854567..1856339) Burkholderia cenocepacia J2315 6929311 YP_002234282.1 CDS BCAM1671 NC_011001.1 1856336 1857394 R hypothetical protein complement(1856336..1857394) Burkholderia cenocepacia J2315 6929312 YP_002234283.1 CDS BCAM1671a NC_011001.1 1857649 1858371 R GntR family regulatory protein complement(1857649..1858371) Burkholderia cenocepacia J2315 6929313 YP_002234284.1 CDS uxuA NC_011001.1 1858639 1859700 D catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 1858639..1859700 Burkholderia cenocepacia J2315 6929314 YP_002234285.1 CDS BCAM1673 NC_011001.1 1859773 1861083 D major facilitator superfamily protein 1859773..1861083 Burkholderia cenocepacia J2315 6930659 YP_002234286.1 CDS BCAM1674 NC_011001.1 1861213 1862646 D GntR family regulatory protein 1861213..1862646 Burkholderia cenocepacia J2315 6929315 YP_002234287.1 CDS BCAM1675 NC_011001.1 1862744 1863133 D hypothetical protein 1862744..1863133 Burkholderia cenocepacia J2315 6929316 YP_002234288.1 CDS BCAM1676 NC_011001.1 1863329 1865113 D putative nitrite/sulfite reductase 1863329..1865113 Burkholderia cenocepacia J2315 6929317 YP_002234289.1 CDS BCAM1677 NC_011001.1 1865110 1865547 D hypothetical protein 1865110..1865547 Burkholderia cenocepacia J2315 6929318 YP_002234290.1 CDS BCAM1678 NC_011001.1 1865631 1866911 R putative lipoprotein complement(1865631..1866911) Burkholderia cenocepacia J2315 6929319 YP_002234291.1 CDS BCAM1679 NC_011001.1 1866911 1869505 R putative lysylphosphatidylglycerol synthetase complement(1866911..1869505) Burkholderia cenocepacia J2315 6929320 YP_002234292.1 CDS BCAM1680 NC_011001.1 1869919 1870353 R hypothetical protein complement(1869919..1870353) Burkholderia cenocepacia J2315 6929321 YP_002234293.1 CDS BCAM1681 NC_011001.1 1870435 1871349 R LysR family regulatory protein complement(1870435..1871349) Burkholderia cenocepacia J2315 6929322 YP_002234294.1 CDS BCAM1682 NC_011001.1 1871458 1872675 D This gene appears to be a fusion of two adjacent genes that are separated in the burkholderiae and several other organism.; putative short-chain dehydrogenase/reductase 1871458..1872675 Burkholderia cenocepacia J2315 6929323 YP_002234295.1 CDS BCAM1683 NC_011001.1 1872733 1876920 R putative bifunctional nitrate/sulfite reductase complement(1872733..1876920) Burkholderia cenocepacia J2315 6929324 YP_002234296.1 CDS BCAM1684 NC_011001.1 1876938 1877282 R putative nitrite reductase complement(1876938..1877282) Burkholderia cenocepacia J2315 6929325 YP_002234297.1 CDS nirB NC_011001.1 1877314 1879899 R putative nitrite reductase complement(1877314..1879899) Burkholderia cenocepacia J2315 6929326 YP_002234298.1 CDS BCAM1686 NC_011001.1 1879921 1881246 R putative nitrate transporter complement(1879921..1881246) Burkholderia cenocepacia J2315 6930568 YP_002234299.1 CDS BCAM1687 NC_011001.1 1881902 1882663 D putative uroporphyrin-III C-methyltransferase 1881902..1882663 Burkholderia cenocepacia J2315 6929327 YP_002234300.1 CDS BCAM1688 NC_011001.1 1882784 1883380 D two-component regulatory system response regulator protein 1882784..1883380 Burkholderia cenocepacia J2315 6929328 YP_002234301.1 CDS BCAM1689 NC_011001.1 1883386 1884438 D putative nitrate transporter component 1883386..1884438 Burkholderia cenocepacia J2315 6929329 YP_002234302.1 CDS BCAM1690 NC_011001.1 1884542 1885141 D uracil DNA glycosylase superfamily protein 1884542..1885141 Burkholderia cenocepacia J2315 6929330 YP_002234303.1 CDS BCAM1691 NC_011001.1 1885231 1886172 D AraC family regulatory protein 1885231..1886172 Burkholderia cenocepacia J2315 6929331 YP_002234304.1 CDS BCAM1692 NC_011001.1 1886289 1886987 D putative fumarylpyruvate hydrolase 1886289..1886987 Burkholderia cenocepacia J2315 6929332 YP_002234305.1 CDS BCAM1693 NC_011001.1 1887042 1887581 R hypothetical protein complement(1887042..1887581) Burkholderia cenocepacia J2315 6929333 YP_002234306.1 CDS BCAM1694 NC_011001.1 1887708 1888919 R major facilitator superfamily protein complement(1887708..1888919) Burkholderia cenocepacia J2315 6929334 YP_002234307.1 CDS BCAM1695 NC_011001.1 1889148 1890728 R subfamily S1B serine peptidase complement(1889148..1890728) Burkholderia cenocepacia J2315 6929335 YP_002234308.1 CDS BCAM1696 NC_011001.1 1891048 1891953 R putative lipoprotein complement(1891048..1891953) Burkholderia cenocepacia J2315 6929336 YP_002234309.1 CDS BCAM1697 NC_011001.1 1892002 1892841 R putative membrane-associated amino terminal protease complement(1892002..1892841) Burkholderia cenocepacia J2315 6929337 YP_002234310.1 CDS BCAM1697A NC_011001.1 1893188 1893469 R hypothetical protein complement(1893188..1893469) Burkholderia cenocepacia J2315 6929338 YP_002234311.1 CDS BCAM1699 NC_011001.1 1893492 1894970 R GntR family regulatory protein complement(1893492..1894970) Burkholderia cenocepacia J2315 6929339 YP_002234312.1 CDS BCAM1700 NC_011001.1 1895144 1896346 D putative acetyltransferase 1895144..1896346 Burkholderia cenocepacia J2315 6929340 YP_002234313.1 CDS BCAM1701 NC_011001.1 1896371 1896841 R hypothetical protein complement(1896371..1896841) Burkholderia cenocepacia J2315 6929341 YP_002234314.1 CDS BCAM1702 NC_011001.1 1896895 1898103 R major facilitator superfamily protein complement(1896895..1898103) Burkholderia cenocepacia J2315 6929342 YP_002234315.1 CDS BCAM1703 NC_011001.1 1898315 1899055 D putative acetyltransferase 1898315..1899055 Burkholderia cenocepacia J2315 6929343 YP_002234316.1 CDS adh NC_011001.1 1899371 1900468 D 2,3-butanediol dehydrogenase 1899371..1900468 Burkholderia cenocepacia J2315 6929344 YP_002234317.1 CDS BCAM1705 NC_011001.1 1900918 1902849 D two-component regulatory system sensor kinase 1900918..1902849 Burkholderia cenocepacia J2315 6930333 YP_002234318.1 CDS BCAM1706 NC_011001.1 1902944 1903615 D hypothetical protein 1902944..1903615 Burkholderia cenocepacia J2315 6929345 YP_002234319.1 CDS BCAM1707 NC_011001.1 1903701 1904567 D putative membrane-associated amino terminal protease 1903701..1904567 Burkholderia cenocepacia J2315 6929346 YP_002234320.1 CDS BCAM1708 NC_011001.1 1904599 1905579 R putative aldo/keto reductase complement(1904599..1905579) Burkholderia cenocepacia J2315 6929347 YP_002234321.1 CDS BCAM1709 NC_011001.1 1905738 1906457 R MarC family protein complement(1905738..1906457) Burkholderia cenocepacia J2315 6929348 YP_002234322.1 CDS BCAM1710 NC_011001.1 1906547 1907386 R putative enoyl-CoA hydratase/isomerase complement(1906547..1907386) Burkholderia cenocepacia J2315 6929349 YP_002234323.1 CDS paaK NC_011001.1 1907386 1908708 R phenylacetate-coenzyme A ligase complement(1907386..1908708) Burkholderia cenocepacia J2315 6929350 YP_002234324.1 CDS paaH NC_011001.1 1908769 1910325 R converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxy-acyl-CoA dehydrogenase complement(1908769..1910325) Burkholderia cenocepacia J2315 6930579 YP_002234325.1 CDS BCAM1713 NC_011001.1 1910874 1911962 D putative ionic antiporter 1910874..1911962 Burkholderia cenocepacia J2315 6930578 YP_002234326.1 CDS BCAM1714 NC_011001.1 1912077 1912934 R putative amidohydrolase complement(1912077..1912934) Burkholderia cenocepacia J2315 6929351 YP_002234327.1 CDS BCAM1715 NC_011001.1 1912931 1913953 R putative D-isomer specific 2-hydroxyacid dehydrogenase complement(1912931..1913953) Burkholderia cenocepacia J2315 6929352 YP_002234328.1 CDS BCAM1716 NC_011001.1 1913950 1915032 R LacI family regulatory protein complement(1913950..1915032) Burkholderia cenocepacia J2315 6929353 YP_002234329.1 CDS BCAM1717 NC_011001.1 1915041 1916927 R putative tripartite ATP-independent transporter complement(1915041..1916927) Burkholderia cenocepacia J2315 6929354 YP_002234330.1 CDS BCAM1718 NC_011001.1 1916931 1917962 R putative solute-binding protein complement(1916931..1917962) Burkholderia cenocepacia J2315 6929355 YP_002234331.1 CDS BCAM1719 NC_011001.1 1918242 1919150 R LysR family regulatory protein complement(1918242..1919150) Burkholderia cenocepacia J2315 6929356 YP_002234332.1 CDS BCAM1720 NC_011001.1 1919264 1920202 D putative D-isomer specific 2-hydroxyacid dehydrogenase 1919264..1920202 Burkholderia cenocepacia J2315 6929357 YP_002234333.1 CDS gudP NC_011001.1 1920234 1921631 D putative glucarate transporter 1920234..1921631 Burkholderia cenocepacia J2315 6929358 YP_002234334.1 CDS BCAM1722 NC_011001.1 1921657 1922625 R LysR family regulatory protein complement(1921657..1922625) Burkholderia cenocepacia J2315 6930489 YP_002234335.1 CDS BCAM1723 NC_011001.1 1922988 1924163 D hypothetical protein 1922988..1924163 Burkholderia cenocepacia J2315 6929359 YP_002234336.1 CDS BCAM1724 NC_011001.1 1924287 1924700 D MarR family regulatory protein 1924287..1924700 Burkholderia cenocepacia J2315 6929360 YP_002234337.1 CDS BCAM1725 NC_011001.1 1924715 1926502 D putative voltage-gated clc-type chloride channel 1924715..1926502 Burkholderia cenocepacia J2315 6929361 YP_002234338.1 CDS BCAM1726 NC_011001.1 1926919 1927320 D hypothetical protein 1926919..1927320 Burkholderia cenocepacia J2315 6929362 YP_002234339.1 CDS BCAM1727 NC_011001.1 1927415 1927735 R hypothetical protein complement(1927415..1927735) Burkholderia cenocepacia J2315 6929363 YP_002234340.1 CDS BCAM1728 NC_011001.1 1927908 1928810 R LysR family regulatory protein complement(1927908..1928810) Burkholderia cenocepacia J2315 6929364 YP_002234341.1 CDS BCAM1729 NC_011001.1 1928993 1930177 D subfamily M20D metallo peptidase; subfamily M20D metallopeptidase 1928993..1930177 Burkholderia cenocepacia J2315 6929365 YP_002234342.1 CDS BCAM1730 NC_011001.1 1930221 1931540 D major facilitator superfamily protein 1930221..1931540 Burkholderia cenocepacia J2315 6929366 YP_002234343.1 CDS BCAM1731 NC_011001.1 1931779 1932321 D putative isochorismatase 1931779..1932321 Burkholderia cenocepacia J2315 6929367 YP_002234344.1 CDS BCAM1732 NC_011001.1 1932592 1933695 R putative porin complement(1932592..1933695) Burkholderia cenocepacia J2315 6929368 YP_002234345.1 CDS BCAM1733 NC_011001.1 1933759 1934178 R hypothetical protein complement(1933759..1934178) Burkholderia cenocepacia J2315 6929369 YP_002234346.1 CDS BCAM1734 NC_011001.1 1934354 1935631 R putative cytochrome C complement(1934354..1935631) Burkholderia cenocepacia J2315 6929370 YP_002234347.1 CDS BCAM1735 NC_011001.1 1935634 1937253 R putative oxidoreductase complement(1935634..1937253) Burkholderia cenocepacia J2315 6929371 YP_002234348.1 CDS BCAM1736 NC_011001.1 1937253 1937759 R hypothetical protein complement(1937253..1937759) Burkholderia cenocepacia J2315 6929372 YP_002234349.1 CDS BCAM1737 NC_011001.1 1938070 1944132 D putative exported glycoprotein 1938070..1944132 Burkholderia cenocepacia J2315 6929373 YP_002234350.1 CDS BCAM1738 NC_011001.1 1944158 1946386 D putative penicillin-binding protein 1944158..1946386 Burkholderia cenocepacia J2315 6929374 YP_002234351.1 CDS BCAM1739 NC_011001.1 1946590 1946877 D hypothetical protein 1946590..1946877 Burkholderia cenocepacia J2315 6929375 YP_002234352.1 CDS BCAM1740 NC_011001.1 1947021 1947719 D putative lipoprotein 1947021..1947719 Burkholderia cenocepacia J2315 6929376 YP_002234353.1 CDS BCAM1741 NC_011001.1 1947978 1949225 R major facilitator superfamily protein complement(1947978..1949225) Burkholderia cenocepacia J2315 6929377 YP_002234354.1 CDS BCAM1742 NC_011001.1 1949512 1950057 D hypothetical protein 1949512..1950057 Burkholderia cenocepacia J2315 6929378 YP_002234355.1 CDS BCAM1743 NC_011001.1 1950158 1951054 R periplasmic solute-binding protein complement(1950158..1951054) Burkholderia cenocepacia J2315 6929379 YP_002234356.1 CDS BCAM1744 NC_011001.1 1951464 1953119 D family S9 unassigned serine peptidase; family S9 serine peptidase 1951464..1953119 Burkholderia cenocepacia J2315 6929380 YP_002234357.1 CDS BCAM1745 NC_011001.1 1953833 1956598 D putative magnesium-transporting ATPase 1953833..1956598 Burkholderia cenocepacia J2315 6929381 YP_002234358.1 CDS BCAM1746 NC_011001.1 1956707 1956991 R putative DNA-binding protein complement(1956707..1956991) Burkholderia cenocepacia J2315 6929382 YP_002234359.1 CDS BCAM1747 NC_011001.1 1957063 1957938 R LysR family regulatory protein complement(1957063..1957938) Burkholderia cenocepacia J2315 6929383 YP_002234360.1 CDS BCAM1748 NC_011001.1 1958466 1959548 D family S11 serine peptidase; D-alanyl-D-alanine carboxypeptidase 1958466..1959548 Burkholderia cenocepacia J2315 6929384 YP_002234361.1 CDS BCAM1749 NC_011001.1 1959593 1959826 D hypothetical protein 1959593..1959826 Burkholderia cenocepacia J2315 6929385 YP_002234362.1 CDS BCAM1750 NC_011001.1 1959912 1960355 D MarR family regulatory protein 1959912..1960355 Burkholderia cenocepacia J2315 6929386 YP_002234363.1 CDS BCAM1751 NC_011001.1 1960423 1960986 D putative isochorismatase 1960423..1960986 Burkholderia cenocepacia J2315 6929387 YP_002234364.1 CDS BCAM1752 NC_011001.1 1960983 1962410 D major facilitator superfamily protein 1960983..1962410 Burkholderia cenocepacia J2315 6929388 YP_002234365.1 CDS BCAM1753A NC_011001.1 1962574 1964292 R putative sulfate transporter complement(1962574..1964292) Burkholderia cenocepacia J2315 6929390 YP_002234366.1 CDS BCAM1754 NC_011001.1 1964745 1965986 D putative mechanosensitive ion channel 1964745..1965986 Burkholderia cenocepacia J2315 6929391 YP_002234367.1 CDS BCAM1755 NC_011001.1 1966024 1967445 R GntR family regulatory protein complement(1966024..1967445) Burkholderia cenocepacia J2315 6929392 YP_002234368.1 CDS BCAM1756 NC_011001.1 1967535 1969922 D putative molybdopterin oxidoreductase 1967535..1969922 Burkholderia cenocepacia J2315 6929393 YP_002234369.1 CDS BCAM1757 NC_011001.1 1969935 1970855 D hypothetical protein 1969935..1970855 Burkholderia cenocepacia J2315 6929394 YP_002234370.1 CDS BCAM1758 NC_011001.1 1970848 1972896 R putative fusaric acid resistance transporter protein complement(1970848..1972896) Burkholderia cenocepacia J2315 6929395 YP_002234371.1 CDS BCAM1759 NC_011001.1 1973052 1973954 D LysR family regulatory protein 1973052..1973954 Burkholderia cenocepacia J2315 6929396 YP_002234372.1 CDS BCAM1760 NC_011001.1 1974359 1975918 D putative multidrug resistance transporter protein 1974359..1975918 Burkholderia cenocepacia J2315 6929397 YP_002234373.1 CDS BCAM1761 NC_011001.1 1976206 1976538 D putative lipoprotein 1976206..1976538 Burkholderia cenocepacia J2315 6929398 YP_002234374.1 CDS BCAM1762 NC_011001.1 1976666 1978255 D putative solute-binding protein 1976666..1978255 Burkholderia cenocepacia J2315 6929399 YP_002234375.1 CDS BCAM1763 NC_011001.1 1978386 1979639 D hypothetical protein 1978386..1979639 Burkholderia cenocepacia J2315 6929400 YP_002234376.1 CDS BCAM1764 NC_011001.1 1979658 1980965 R putative manganese transport protein, NRAMP family complement(1979658..1980965) Burkholderia cenocepacia J2315 6929401 YP_002234377.1 CDS BCAM1765 NC_011001.1 1981061 1982317 R putative oxalate decarboxylase complement(1981061..1982317) Burkholderia cenocepacia J2315 6929402 YP_002234378.1 CDS hipA NC_011001.1 1982656 1983990 R putative regulatory protein complement(1982656..1983990) Burkholderia cenocepacia J2315 6929403 YP_002234379.1 CDS hipB NC_011001.1 1983994 1984242 R putative regulatory protein complement(1983994..1984242) Burkholderia cenocepacia J2315 6930493 YP_002234380.1 CDS BCAM1768 NC_011001.1 1984502 1985386 D hypothetical protein 1984502..1985386 Burkholderia cenocepacia J2315 6930494 YP_002234381.1 CDS ddpX NC_011001.1 1985404 1985967 D catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent; involved in peptidoglycan synthesis; D-alanyl-D-alanine dipeptidase 1985404..1985967 Burkholderia cenocepacia J2315 6929404 YP_002234382.1 CDS BCAM1770 NC_011001.1 1986038 1987639 D putative ABC transporter substrate-binding protein 1986038..1987639 Burkholderia cenocepacia J2315 6930439 YP_002234383.1 CDS BCAM1771 NC_011001.1 1987650 1988720 D putative ABC transporter permease 1987650..1988720 Burkholderia cenocepacia J2315 6929405 YP_002234384.1 CDS BCAM1772 NC_011001.1 1988787 1989701 D putative ABC transporter permease 1988787..1989701 Burkholderia cenocepacia J2315 6929406 YP_002234385.1 CDS BCAM1773 NC_011001.1 1989703 1990617 D ABC transporter ATP-binding protein 1989703..1990617 Burkholderia cenocepacia J2315 6929407 YP_002234386.1 CDS BCAM1774 NC_011001.1 1990614 1991390 D ABC transporter ATP-binding protein 1990614..1991390 Burkholderia cenocepacia J2315 6929408 YP_002234387.1 CDS BCAM1775 NC_011001.1 1991520 1991774 D putative transglycosylase associated protein 1991520..1991774 Burkholderia cenocepacia J2315 6929409 YP_002234388.1 CDS BCAM1776 NC_011001.1 1991867 1992394 D putative transposase 1991867..1992394 Burkholderia cenocepacia J2315 6929410 YP_002234389.1 CDS BCAM1777 NC_011001.1 1992394 1993230 D putative integrase 1992394..1993230 Burkholderia cenocepacia J2315 6929411 YP_002234390.1 CDS BCAM1777A NC_011001.1 1993556 1993888 D hypothetical protein 1993556..1993888 Burkholderia cenocepacia J2315 6929412 YP_002234391.1 CDS BCAM1778 NC_011001.1 1993910 1994782 R LysR family regulatory protein complement(1993910..1994782) Burkholderia cenocepacia J2315 6929413 YP_002234392.1 CDS BCAM1779 NC_011001.1 1994889 1995788 R putative beta-lactamase complement(1994889..1995788) Burkholderia cenocepacia J2315 6929414 YP_002234393.1 CDS BCAM1780 NC_011001.1 1996000 1996869 R putative cell wall lysis peptidase; peptidoglycan-binding lysm:peptidase m23b precursor complement(1996000..1996869) Burkholderia cenocepacia J2315 6929415 YP_002234394.1 CDS BCAM1780A NC_011001.1 1997106 1997216 R hypothetical protein complement(1997106..1997216) Burkholderia cenocepacia J2315 6929416 YP_002234395.1 CDS BCAM1781 NC_011001.1 1997370 1998266 D LysR family regulatory protein 1997370..1998266 Burkholderia cenocepacia J2315 6929417 YP_002234396.1 CDS BCAM1782 NC_011001.1 1998307 1998699 D hypothetical protein 1998307..1998699 Burkholderia cenocepacia J2315 6929418 YP_002234397.1 CDS BCAM1783 NC_011001.1 1999210 2001372 D hypothetical protein 1999210..2001372 Burkholderia cenocepacia J2315 6929419 YP_002234398.1 CDS BCAM1784 NC_011001.1 2001457 2002206 R hypothetical protein complement(2001457..2002206) Burkholderia cenocepacia J2315 6929420 YP_002234399.1 CDS BCAM1785 NC_011001.1 2002329 2003330 R putative aldo/keto reductase complement(2002329..2003330) Burkholderia cenocepacia J2315 6929421 YP_002234400.1 CDS BCAM1786 NC_011001.1 2003472 2004383 D LysR family regulatory protein 2003472..2004383 Burkholderia cenocepacia J2315 6929422 YP_002234401.1 CDS BCAM1787 NC_011001.1 2004427 2005581 R putative porin complement(2004427..2005581) Burkholderia cenocepacia J2315 6929423 YP_002234402.1 CDS BCAM1788 NC_011001.1 2005962 2007059 D hypothetical protein 2005962..2007059 Burkholderia cenocepacia J2315 6929424 YP_002234403.1 CDS BCAM1789 NC_011001.1 2007121 2008059 D family S9 unassigned serine peptidase; putative esterase 2007121..2008059 Burkholderia cenocepacia J2315 6929425 YP_002234404.1 CDS BCAM1790 NC_011001.1 2008124 2009725 R putative gluconate dehydrogenase complement(2008124..2009725) Burkholderia cenocepacia J2315 6929426 YP_002234405.1 CDS BCAM1791 NC_011001.1 2009752 2010285 R hypothetical protein complement(2009752..2010285) Burkholderia cenocepacia J2315 6929427 YP_002234406.1 CDS BCAM1792 NC_011001.1 2010301 2011584 R putative cytochrome C complement(2010301..2011584) Burkholderia cenocepacia J2315 6929428 YP_002234407.1 CDS BCAM1795 NC_011001.1 2012921 2013793 R NAD-dependent epimerase/dehydratase complement(2012921..2013793) Burkholderia cenocepacia J2315 6929430 YP_002234408.1 CDS BCAM1796 NC_011001.1 2013889 2014809 D LysR family regulatory protein 2013889..2014809 Burkholderia cenocepacia J2315 6929432 YP_002234409.1 CDS BCAM1797 NC_011001.1 2014864 2015958 R putative ion channel protein complement(2014864..2015958) Burkholderia cenocepacia J2315 6929433 YP_002234410.1 CDS BCAM1798 NC_011001.1 2016019 2017353 R putative oxidoreductase complement(2016019..2017353) Burkholderia cenocepacia J2315 6929434 YP_002234411.1 CDS BCAM1799 NC_011001.1 2017554 2018201 D hypothetical protein 2017554..2018201 Burkholderia cenocepacia J2315 6929435 YP_002234412.1 CDS BCAM1800 NC_011001.1 2018320 2018595 R hypothetical protein complement(2018320..2018595) Burkholderia cenocepacia J2315 6929436 YP_002234413.1 CDS BCAM1801 NC_011001.1 2018767 2018976 R hypothetical protein complement(2018767..2018976) Burkholderia cenocepacia J2315 6929437 YP_002234414.1 CDS BCAM1802 NC_011001.1 2019463 2020317 D putative regulatory protein 2019463..2020317 Burkholderia cenocepacia J2315 6929438 YP_002234415.1 CDS BCAM1803 NC_011001.1 2020436 2022103 D hypothetical protein 2020436..2022103 Burkholderia cenocepacia J2315 6929439 YP_002234416.1 CDS BCAM1804 NC_011001.1 2022168 2023727 R methyl-accepting chemotaxis protein complement(2022168..2023727) Burkholderia cenocepacia J2315 6929440 YP_002234417.1 CDS BCAM1805 NC_011001.1 2023964 2025478 D major facilitator superfamily protein 2023964..2025478 Burkholderia cenocepacia J2315 6929441 YP_002234418.1 CDS BCAM1806 NC_011001.1 2025542 2026540 R putative zinc-binding dehydrogenase complement(2025542..2026540) Burkholderia cenocepacia J2315 6929442 YP_002234419.1 CDS BCAM1807 NC_011001.1 2026672 2027544 D LysR family regulatory protein 2026672..2027544 Burkholderia cenocepacia J2315 6929443 YP_002234420.1 CDS BCAM1808 NC_011001.1 2027625 2028185 D putative acetyltransferase 2027625..2028185 Burkholderia cenocepacia J2315 6929444 YP_002234421.1 CDS BCAM1809 NC_011001.1 2028195 2029034 D MerR family regulatory protein 2028195..2029034 Burkholderia cenocepacia J2315 6929445 YP_002234422.1 CDS BCAM1810 NC_011001.1 2029416 2029619 D putative cold shock protein 2029416..2029619 Burkholderia cenocepacia J2315 6929446 YP_002234423.1 CDS BCAM1811 NC_011001.1 2029900 2030124 D hypothetical protein 2029900..2030124 Burkholderia cenocepacia J2315 6929447 YP_002234424.1 CDS BCAM1812 NC_011001.1 2030221 2031183 R catalyzes the formation of putrescine from agmatine; agmatinase complement(2030221..2031183) Burkholderia cenocepacia J2315 6929448 YP_002234425.1 CDS BCAM1813 NC_011001.1 2031476 2032216 D hypothetical protein 2031476..2032216 Burkholderia cenocepacia J2315 6929449 YP_002234426.1 CDS BCAM1814 NC_011001.1 2032438 2034045 D putative flavin-binding monooxygenase 2032438..2034045 Burkholderia cenocepacia J2315 6929450 YP_002234427.1 CDS BCAM1815 NC_011001.1 2034067 2034999 D short chain dehydrogenase 2034067..2034999 Burkholderia cenocepacia J2315 6929451 YP_002234428.1 CDS BCAM1816 NC_011001.1 2034996 2035901 D hypothetical protein 2034996..2035901 Burkholderia cenocepacia J2315 6929452 YP_002234429.1 CDS BCAM1817 NC_011001.1 2035906 2036820 D putative hydrolase 2035906..2036820 Burkholderia cenocepacia J2315 6929453 YP_002234430.1 CDS BCAM1818 NC_011001.1 2036772 2037335 R hypothetical protein complement(2036772..2037335) Burkholderia cenocepacia J2315 6929454 YP_002234431.1 CDS BCAM1819 NC_011001.1 2037460 2038353 D putative transporter 2037460..2038353 Burkholderia cenocepacia J2315 6929455 YP_002234432.1 CDS BCAM1820 NC_011001.1 2038358 2039104 D aldolase II superfamily protein 2038358..2039104 Burkholderia cenocepacia J2315 6929456 YP_002234433.1 CDS BCAM1821 NC_011001.1 2039170 2039358 D 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase 2039170..2039358 Burkholderia cenocepacia J2315 6929457 YP_002234434.1 CDS BCAM1822 NC_011001.1 2039550 2044391 D putative NAD-dependent glutamate dehydrogenase 2039550..2044391 Burkholderia cenocepacia J2315 6929458 YP_002234435.1 CDS BCAM1823 NC_011001.1 2044414 2045277 R putative methyltransferase complement(2044414..2045277) Burkholderia cenocepacia J2315 6929459 YP_002234436.1 CDS BCAM1824 NC_011001.1 2045285 2045635 R hypothetical protein complement(2045285..2045635) Burkholderia cenocepacia J2315 6929460 YP_002234437.1 CDS BCAM1825 NC_011001.1 2045637 2045813 R hypothetical protein complement(2045637..2045813) Burkholderia cenocepacia J2315 6929461 YP_002234438.1 CDS BCAM1826 NC_011001.1 2045914 2046744 R putative N-hydroxyarylamine O-acetyltransferase complement(2045914..2046744) Burkholderia cenocepacia J2315 6929462 YP_002234439.1 CDS BCAM1827 NC_011001.1 2046877 2047563 R hypothetical protein complement(2046877..2047563) Burkholderia cenocepacia J2315 6929463 YP_002234440.1 CDS BCAM1828 NC_011001.1 2047901 2049385 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(2047901..2049385) Burkholderia cenocepacia J2315 6929464 YP_002234441.1 CDS BCAM1829 NC_011001.1 2049729 2050163 D putative universal stress protein 2049729..2050163 Burkholderia cenocepacia J2315 6929465 YP_002234442.1 CDS BCAM1830 NC_011001.1 2050640 2050888 D hypothetical protein 2050640..2050888 Burkholderia cenocepacia J2315 6929466 YP_002234443.1 CDS BCAM1831 NC_011001.1 2051010 2051483 D putative cyclase 2051010..2051483 Burkholderia cenocepacia J2315 6929467 YP_002234444.1 CDS BCAM1832 NC_011001.1 2051506 2052270 R hypothetical protein complement(2051506..2052270) Burkholderia cenocepacia J2315 6929468 YP_002234445.1 CDS acnB NC_011001.1 2052679 2055264 D catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 2052679..2055264 Burkholderia cenocepacia J2315 6929469 YP_002234446.1 CDS BCAM1834 NC_011001.1 2055378 2055881 R hypothetical protein complement(2055378..2055881) Burkholderia cenocepacia J2315 6930328 YP_002234447.1 CDS BCAM1835 NC_011001.1 2055957 2056370 R hypothetical protein complement(2055957..2056370) Burkholderia cenocepacia J2315 6929470 YP_002234448.1 CDS BCAM1836 NC_011001.1 2056588 2057586 D hypothetical protein 2056588..2057586 Burkholderia cenocepacia J2315 6929471 YP_002234449.1 CDS BCAM1838 NC_011001.1 2057747 2058673 D putative ADP-ribosylglycohydrolase 2057747..2058673 Burkholderia cenocepacia J2315 6929472 YP_002234450.1 CDS BCAM1839 NC_011001.1 2058761 2059156 D putative endoribonuclease 2058761..2059156 Burkholderia cenocepacia J2315 6929473 YP_002234451.1 CDS BCAM1840 NC_011001.1 2059172 2059726 R putative acetyltransferase complement(2059172..2059726) Burkholderia cenocepacia J2315 6929474 YP_002234452.1 CDS BCAM1841 NC_011001.1 2059899 2061299 R major facilitator superfamily protein complement(2059899..2061299) Burkholderia cenocepacia J2315 6929475 YP_002234453.1 CDS BCAM1842 NC_011001.1 2061336 2062580 R pyridine nucleotide-disulphide oxidoreductase complement(2061336..2062580) Burkholderia cenocepacia J2315 6929476 YP_002234454.1 CDS BCAM1843 NC_011001.1 2062577 2063539 R putative dioxygenase complement(2062577..2063539) Burkholderia cenocepacia J2315 6929477 YP_002234455.1 CDS BCAM1844 NC_011001.1 2063558 2065048 R putative aldehyde dehydrogenase complement(2063558..2065048) Burkholderia cenocepacia J2315 6929478 YP_002234456.1 CDS BCAM1845 NC_011001.1 2065121 2065948 R catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase complement(2065121..2065948) Burkholderia cenocepacia J2315 6929479 YP_002234457.1 CDS BCAM1846 NC_011001.1 2065941 2067608 R hypothetical protein complement(2065941..2067608) Burkholderia cenocepacia J2315 6929480 YP_002234458.1 CDS BCAM1847 NC_011001.1 2067601 2068398 R short chain dehydrogenase complement(2067601..2068398) Burkholderia cenocepacia J2315 6929481 YP_002234459.1 CDS BCAM1848 NC_011001.1 2068395 2069252 R IclR family regulatory protein complement(2068395..2069252) Burkholderia cenocepacia J2315 6929482 YP_002234460.1 CDS BCAM1849 NC_011001.1 2069290 2070186 R family S33 serine peptidase; putative hydrolase complement(2069290..2070186) Burkholderia cenocepacia J2315 6929483 YP_002234461.1 CDS BCAM1850 NC_011001.1 2070205 2070732 R hypothetical protein complement(2070205..2070732) Burkholderia cenocepacia J2315 6929484 YP_002234462.1 CDS BCAM1851 NC_011001.1 2070767 2071537 R member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase complement(2070767..2071537) Burkholderia cenocepacia J2315 6929485 YP_002234463.1 CDS BCAM1852 NC_011001.1 2071530 2072600 R [2Fe-2S]-binding protein complement(2071530..2072600) Burkholderia cenocepacia J2315 6929486 YP_002234464.1 CDS BCAM1853 NC_011001.1 2072655 2072966 R hypothetical protein complement(2072655..2072966) Burkholderia cenocepacia J2315 6929487 YP_002234465.1 CDS BCAM1854 NC_011001.1 2072968 2073285 R [2Fe-2S]-binding protein complement(2072968..2073285) Burkholderia cenocepacia J2315 6929488 YP_002234466.1 CDS BCAM1855 NC_011001.1 2073730 2074809 D putative porin 2073730..2074809 Burkholderia cenocepacia J2315 6929489 YP_002234467.1 CDS BCAM1856 NC_011001.1 2074918 2075796 R IclR family regulatory protein complement(2074918..2075796) Burkholderia cenocepacia J2315 6929490 YP_002234468.1 CDS BCAM1857 NC_011001.1 2076087 2076566 R hypothetical protein complement(2076087..2076566) Burkholderia cenocepacia J2315 6929491 YP_002234469.1 CDS BCAM1858 NC_011001.1 2076907 2077257 R hypothetical protein complement(2076907..2077257) Burkholderia cenocepacia J2315 6929492 YP_002234470.1 CDS BCAM1859 NC_011001.1 2077250 2077402 R No significant database matches.; hypothetical protein complement(2077250..2077402) Burkholderia cenocepacia J2315 6929493 YP_002234471.1 CDS BCAM1860 NC_011001.1 2077419 2078141 R 2OG-Fe(II) oxygenase superfamily protein complement(2077419..2078141) Burkholderia cenocepacia J2315 6929494 YP_002234472.1 CDS BCAM1861 NC_011001.1 2078165 2079310 R calcineurin-like phosphoesterase complement(2078165..2079310) Burkholderia cenocepacia J2315 6929495 YP_002234473.1 CDS BCAM1862 NC_011001.1 2079498 2080400 D LysR family regulatory protein 2079498..2080400 Burkholderia cenocepacia J2315 6929496 YP_002234474.1 CDS BCAM1863 NC_011001.1 2080782 2081075 D hypothetical protein 2080782..2081075 Burkholderia cenocepacia J2315 6929497 YP_002234475.1 CDS BCAM1864 NC_011001.1 2081072 2082121 D with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; multidrug resistance protein MdtN 2081072..2082121 Burkholderia cenocepacia J2315 6929498 YP_002234476.1 CDS BCAM1865 NC_011001.1 2082102 2084150 D putative multidrug efflux system transporter protein 2082102..2084150 Burkholderia cenocepacia J2315 6929499 YP_002234477.1 CDS BCAM1866 NC_011001.1 2084137 2085681 D outer membrane efflux protein 2084137..2085681 Burkholderia cenocepacia J2315 6929500 YP_002234478.1 CDS BCAM1867 NC_011001.1 2085986 2086693 D putative Mg(2+) transport ATPase 2085986..2086693 Burkholderia cenocepacia J2315 6929501 YP_002234479.1 CDS cepR NC_011001.1 2086737 2087456 R Almost identical to Burkholderia cepacia transcriptional activator CepR SWALL:Q9ZIU0 (EMBL:AF019654) (239 aa) fasta scores: E(): 4e-99, 99.58% id in 239 aa, and Burkholderia vietnamiensis N-acyl homoserine lactone transcriptional regulator CepR SWALL:Q93PF4 (EMBL:AF333007) (239 aa) fasta scores: E(): 5.4e-99, 99.58% id in 239 aa; N-acylhomoserine lactone dependent regulatory protein CepR complement(2086737..2087456) Burkholderia cenocepacia J2315 6929502 YP_002234480.1 CDS BCAM1869 NC_011001.1 2087530 2087973 D hypothetical protein 2087530..2087973 Burkholderia cenocepacia J2315 6930420 YP_002234481.1 CDS cepI NC_011001.1 2088184 2088792 D Previously sequenced as Burkholderia cepacia acyl homoserine lactone synthase CepI SWALL:Q9ZIU1 (EMBL:AF019654) (202 aa) fasta scores: E(): 7.4e-86, 100% id in 202 aa. Highly similar to Burkholderia vietnamiensis AHL synthase CepI SWALL:Q9AM53 (EMBL:AF330016) (202 aa) fasta scores: E(): 1.6e-77, 90.09% id in 202 aa. The CepI autoinducer synthase produces N-hexanoyl-acylhomoserine lactone (C6-HSL) and N-octanoyl-acylhomoserine lactone (C8-HSL) signaling molecules; N-acylhomoserine lactone synthase CepI 2088184..2088792 Burkholderia cenocepacia J2315 6929503 YP_002234482.1 CDS BCAM1871 NC_011001.1 2088845 2089609 D hypothetical protein 2088845..2089609 Burkholderia cenocepacia J2315 6930419 YP_002234483.1 CDS BCAM1872 NC_011001.1 2089814 2090104 R No significant database matches.; hypothetical protein complement(2089814..2090104) Burkholderia cenocepacia J2315 6929504 YP_002234484.1 CDS BCAM1873 NC_011001.1 2090405 2090791 D glyoxalase/bleomycin resistance/dioxygenase superfamily protein 2090405..2090791 Burkholderia cenocepacia J2315 6929505 YP_002234485.1 CDS BCAM1875 NC_011001.1 2091958 2092368 D No significant database matches.; hypothetical protein 2091958..2092368 Burkholderia cenocepacia J2315 6929506 YP_002234486.1 CDS BCAM1876 NC_011001.1 2093037 2093396 R No significant database matches.; hypothetical protein complement(2093037..2093396) Burkholderia cenocepacia J2315 6929507 YP_002234487.1 CDS BCAM1876A NC_011001.1 2093864 2094064 D No significant database matches.; hypothetical protein 2093864..2094064 Burkholderia cenocepacia J2315 6929508 YP_002234488.1 CDS BCAM1877 NC_011001.1 2094115 2095503 D hypothetical protein 2094115..2095503 Burkholderia cenocepacia J2315 6929509 YP_002234489.1 CDS BCAM1878 NC_011001.1 2095908 2096390 D No significant database matches.; putative phage repressor protein 2095908..2096390 Burkholderia cenocepacia J2315 6929510 YP_002234490.1 CDS BCAM1878A NC_011001.1 2096548 2096655 D hypothetical protein 2096548..2096655 Burkholderia cenocepacia J2315 6929511 YP_002234491.1 CDS BCAM1879 NC_011001.1 2096705 2097502 D hypothetical protein 2096705..2097502 Burkholderia cenocepacia J2315 6929512 YP_002234492.1 CDS BCAM1880 NC_011001.1 2097701 2098033 D No significant database matches.; hypothetical protein 2097701..2098033 Burkholderia cenocepacia J2315 6929513 YP_002234493.1 CDS BCAM1881 NC_011001.1 2098067 2098768 R hypothetical protein complement(2098067..2098768) Burkholderia cenocepacia J2315 6929514 YP_002234494.1 CDS BCAM1882 NC_011001.1 2098771 2099421 R hypothetical protein complement(2098771..2099421) Burkholderia cenocepacia J2315 6929515 YP_002234495.1 CDS BCAM1883 NC_011001.1 2099515 2100417 R hypothetical protein complement(2099515..2100417) Burkholderia cenocepacia J2315 6929516 YP_002234496.1 CDS BCAM1884 NC_011001.1 2100844 2101170 R putative DNA-binding phage protein complement(2100844..2101170) Burkholderia cenocepacia J2315 6929517 YP_002234497.1 CDS BCAM1885 NC_011001.1 2101408 2101989 D putative phage-related endonuclease 2101408..2101989 Burkholderia cenocepacia J2315 6929518 YP_002234498.1 CDS BCAM1886 NC_011001.1 2102259 2102648 D No significant database matches.; hypothetical protein 2102259..2102648 Burkholderia cenocepacia J2315 6929519 YP_002234499.1 CDS BCAM1887 NC_011001.1 2102703 2103359 D No significant database matches.; hypothetical protein 2102703..2103359 Burkholderia cenocepacia J2315 6929520 YP_002234500.1 CDS BCAM1888 NC_011001.1 2103442 2104215 D putative phage terminase small subunit 2103442..2104215 Burkholderia cenocepacia J2315 6929521 YP_002234501.1 CDS BCAM1889 NC_011001.1 2104190 2105500 D putative phage terminase large subunit 2104190..2105500 Burkholderia cenocepacia J2315 6929522 YP_002234502.1 CDS BCAM1890 NC_011001.1 2105510 2106970 D No significant database matches.; hypothetical protein 2105510..2106970 Burkholderia cenocepacia J2315 6929523 YP_002234503.1 CDS BCAM1891 NC_011001.1 2106974 2107984 D No significant database matches.; hypothetical protein 2106974..2107984 Burkholderia cenocepacia J2315 6929524 YP_002234504.1 CDS BCAM1892 NC_011001.1 2108382 2108981 D No significant database matches.; hypothetical protein 2108382..2108981 Burkholderia cenocepacia J2315 6929525 YP_002234505.1 CDS BCAM1893 NC_011001.1 2109003 2109779 D No significant database matches.; hypothetical protein 2109003..2109779 Burkholderia cenocepacia J2315 6929526 YP_002234506.1 CDS BCAM1894 NC_011001.1 2109861 2110448 D No significant database matches.; hypothetical protein 2109861..2110448 Burkholderia cenocepacia J2315 6929527 YP_002234507.1 CDS BCAM1895 NC_011001.1 2110578 2111600 D No significant database matches.; hypothetical protein 2110578..2111600 Burkholderia cenocepacia J2315 6929528 YP_002234508.1 CDS BCAM1895A NC_011001.1 2111631 2111750 D No significant database matches.; hypothetical protein 2111631..2111750 Burkholderia cenocepacia J2315 6929529 YP_002234509.1 CDS BCAM1896 NC_011001.1 2111796 2112299 D No significant database matches.; hypothetical protein 2111796..2112299 Burkholderia cenocepacia J2315 6929530 YP_002234510.1 CDS BCAM1897 NC_011001.1 2112339 2112809 D No significant database matches.; hypothetical phage membrane protein 2112339..2112809 Burkholderia cenocepacia J2315 6929531 YP_002234511.1 CDS BCAM1898 NC_011001.1 2112822 2113262 D No significant database matches.; hypothetical protein 2112822..2113262 Burkholderia cenocepacia J2315 6929532 YP_002234512.1 CDS BCAM1899 NC_011001.1 2113272 2114039 D putative phage baseplate protein 2113272..2114039 Burkholderia cenocepacia J2315 6929533 YP_002234513.1 CDS BCAM1900 NC_011001.1 2114055 2115107 D No significant database matches.; hypothetical protein 2114055..2115107 Burkholderia cenocepacia J2315 6929534 YP_002234514.1 CDS BCAM1901 NC_011001.1 2115237 2116589 D No significant database matches.; hypothetical protein 2115237..2116589 Burkholderia cenocepacia J2315 6929535 YP_002234515.1 CDS BCAM1902 NC_011001.1 2116680 2117120 D No significant database matches.; hypothetical protein 2116680..2117120 Burkholderia cenocepacia J2315 6929536 YP_002234516.1 CDS BCAM1903 NC_011001.1 2117202 2117735 D No significant database matches.; hypothetical protein 2117202..2117735 Burkholderia cenocepacia J2315 6929537 YP_002234517.1 CDS BCAM1903A NC_011001.1 2117739 2117882 D No significant database matches.; hypothetical protein 2117739..2117882 Burkholderia cenocepacia J2315 6929538 YP_002234518.1 CDS BCAM1904 NC_011001.1 2117891 2119933 D hypothetical protein 2117891..2119933 Burkholderia cenocepacia J2315 6929539 YP_002234519.1 CDS BCAM1906 NC_011001.1 2120049 2120866 D transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3'; putative transposase join(2120049..2120402,2120399..2120866) Burkholderia cenocepacia J2315 6929540 YP_002234520.1 CDS BCAM1907 NC_011001.1 2120893 2121555 D No significant database matches.; hypothetical protein 2120893..2121555 Burkholderia cenocepacia J2315 6929541 YP_002234521.1 CDS BCAM1908 NC_011001.1 2121565 2121852 D No significant database matches.; hypothetical protein 2121565..2121852 Burkholderia cenocepacia J2315 6929542 YP_002234522.1 CDS BCAM1909 NC_011001.1 2121857 2123032 D No significant database matches.; hypothetical protein 2121857..2123032 Burkholderia cenocepacia J2315 6929543 YP_002234523.1 CDS BCAM1910 NC_011001.1 2123034 2123459 D No significant database matches.; hypothetical protein 2123034..2123459 Burkholderia cenocepacia J2315 6929544 YP_002234524.1 CDS BCAM1911 NC_011001.1 2123493 2123891 D No significant database matches.; hypothetical protein 2123493..2123891 Burkholderia cenocepacia J2315 6929545 YP_002234525.1 CDS BCAM1912 NC_011001.1 2123895 2125103 D hypothetical protein 2123895..2125103 Burkholderia cenocepacia J2315 6929546 YP_002234526.1 CDS BCAM1913 NC_011001.1 2125159 2126739 D hypothetical protein 2125159..2126739 Burkholderia cenocepacia J2315 6929547 YP_002234527.1 CDS BCAM1915 NC_011001.1 2128810 2129073 D transposase 2128810..2129073 Burkholderia cenocepacia J2315 6929548 YP_002234528.1 CDS BCAM1918 NC_011001.1 2131628 2132182 D putative phage lysozyme 2131628..2132182 Burkholderia cenocepacia J2315 6929550 YP_002234529.1 CDS BCAM1919 NC_011001.1 2132496 2132912 R No significant database matches.; hypothetical protein complement(2132496..2132912) Burkholderia cenocepacia J2315 6929551 YP_002234530.1 CDS BCAM1920 NC_011001.1 2132919 2133680 R No significant database matches.; hypothetical protein complement(2132919..2133680) Burkholderia cenocepacia J2315 6929552 YP_002234531.1 CDS BCAM1921 NC_011001.1 2133744 2134778 R putative phage membrane protein complement(2133744..2134778) Burkholderia cenocepacia J2315 6929553 YP_002234532.1 CDS BCAM1922 NC_011001.1 2134952 2135443 D putative DNA-binding phage protein 2134952..2135443 Burkholderia cenocepacia J2315 6929554 YP_002234533.1 CDS BCAM1925 NC_011001.1 2136713 2137530 D transposase proposed to express due to -1 translational frameshift at the sequence 5'-AAAAAC-3'; putative transposase join(2136713..2137066,2137063..2137530) Burkholderia cenocepacia J2315 6929556 YP_002234534.1 CDS BCAM1926 NC_011001.1 2138123 2138584 D hypothetical protein 2138123..2138584 Burkholderia cenocepacia J2315 6929557 YP_002234535.1 CDS BCAM1927 NC_011001.1 2138743 2139072 R hypothetical protein complement(2138743..2139072) Burkholderia cenocepacia J2315 6929558 YP_002234536.1 CDS BCAM1928 NC_011001.1 2139585 2139983 D putative transcription elongation factor 2139585..2139983 Burkholderia cenocepacia J2315 6929559 YP_002234537.1 CDS BCAM1929 NC_011001.1 2140130 2140930 R putative integrase complement(2140130..2140930) Burkholderia cenocepacia J2315 6929560 YP_002234538.1 CDS BCAM1930 NC_011001.1 2140954 2141352 R putative transposase complement(2140954..2141352) Burkholderia cenocepacia J2315 6929561 YP_002234539.1 CDS BCAM1931 NC_011001.1 2141476 2142555 R putative porin complement(2141476..2142555) Burkholderia cenocepacia J2315 6929562 YP_002234540.1 CDS BCAM1932 NC_011001.1 2143765 2144151 R HxlR-family transcriptional regulator complement(2143765..2144151) Burkholderia cenocepacia J2315 6929563 YP_002234541.1 CDS BCAM1933 NC_011001.1 2144477 2144956 D putative cyclase 2144477..2144956 Burkholderia cenocepacia J2315 6929564 YP_002234542.1 CDS BCAM1934 NC_011001.1 2145193 2146008 D LuxR superfamily regulatory protein 2145193..2146008 Burkholderia cenocepacia J2315 6929565 YP_002234543.1 CDS BCAM1935 NC_011001.1 2146425 2148050 D putative amidohydrolase 2146425..2148050 Burkholderia cenocepacia J2315 6929566 YP_002234544.1 CDS BCAM1936 NC_011001.1 2148069 2148680 R putative isochorismatase complement(2148069..2148680) Burkholderia cenocepacia J2315 6929567 YP_002234545.1 CDS BCAM1937 NC_011001.1 2148858 2150192 R major facilitator superfamily protein complement(2148858..2150192) Burkholderia cenocepacia J2315 6929568 YP_002234546.1 CDS BCAM1938 NC_011001.1 2150590 2151168 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 2150590..2151168 Burkholderia cenocepacia J2315 6929569 YP_002234547.1 CDS BCAM1939 NC_011001.1 2151165 2151920 D putative 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase 2151165..2151920 Burkholderia cenocepacia J2315 6929570 YP_002234548.1 CDS BCAM1940 NC_011001.1 2152033 2153550 R putative permease complement(2152033..2153550) Burkholderia cenocepacia J2315 6929571 YP_002234549.1 CDS BCAM1941 NC_011001.1 2153753 2154400 R putative glutathione S-transferase complement(2153753..2154400) Burkholderia cenocepacia J2315 6929572 YP_002234550.1 CDS BCAM1942 NC_011001.1 2154506 2155618 D Similar to the C-terminal region of pyruvate dehydrogenase E1 component; hypothetical protein 2154506..2155618 Burkholderia cenocepacia J2315 6929573 YP_002234551.1 CDS BCAM1943 NC_011001.1 2155635 2156090 R MarR family regulatory protein complement(2155635..2156090) Burkholderia cenocepacia J2315 6929574 YP_002234552.1 CDS BCAM1944 NC_011001.1 2156264 2158948 D paralogs to the E1 component of pyruvate dehydrogenase subunit E1; 2-oxoacid dehydrogenase subunit E1 2156264..2158948 Burkholderia cenocepacia J2315 6929575 YP_002234553.1 CDS BCAM1945 NC_011001.1 2159000 2160523 R efflux system outer membrane protein complement(2159000..2160523) Burkholderia cenocepacia J2315 6929576 YP_002234554.1 CDS BCAM1946 NC_011001.1 2160520 2163693 R putative quinoxaline efflux system transporter protein complement(2160520..2163693) Burkholderia cenocepacia J2315 6929577 YP_002234555.1 CDS oqxA NC_011001.1 2163707 2164903 R putative quinoxaline efflux system transport protein complement(2163707..2164903) Burkholderia cenocepacia J2315 6929578 YP_002234556.1 CDS BCAM1948 NC_011001.1 2164983 2165462 D MerR family regulatory protein 2164983..2165462 Burkholderia cenocepacia J2315 6930576 YP_002234557.1 CDS BCAM1949 NC_011001.1 2165487 2166248 R short chain dehydrogenase complement(2165487..2166248) Burkholderia cenocepacia J2315 6929579 YP_002234558.1 CDS BCAM1950 NC_011001.1 2166357 2167268 D LysR family regulatory protein 2166357..2167268 Burkholderia cenocepacia J2315 6929580 YP_002234559.1 CDS BCAM1952 NC_011001.1 2167727 2168557 R transposase complement(2167727..2168557) Burkholderia cenocepacia J2315 6929582 YP_002234560.1 CDS BCAM1953 NC_011001.1 2168590 2168856 R putative transposase complement(2168590..2168856) Burkholderia cenocepacia J2315 6929583 YP_002234561.1 CDS BCAM1954 NC_011001.1 2169154 2170482 R sodium:dicarboxylate symporter complement(2169154..2170482) Burkholderia cenocepacia J2315 6929584 YP_002234562.1 CDS ggt1 NC_011001.1 2170663 2172414 R family T3 threonine peptidase; gamma-glutamyltransferase precursor 1 complement(2170663..2172414) Burkholderia cenocepacia J2315 6929585 YP_002234563.1 CDS BCAM1956 NC_011001.1 2172789 2173667 D RpiR family transcriptional regulator 2172789..2173667 Burkholderia cenocepacia J2315 6930469 YP_002234564.1 CDS BCAM1957 NC_011001.1 2173695 2175041 R ABC transporter ATP-binding protein complement(2173695..2175041) Burkholderia cenocepacia J2315 6929586 YP_002234565.1 CDS BCAM1958 NC_011001.1 2175053 2176807 R ABC transporter permease complement(2175053..2176807) Burkholderia cenocepacia J2315 6929587 YP_002234566.1 CDS BCAM1959 NC_011001.1 2176888 2177097 R No significant database matches.; hypothetical protein complement(2176888..2177097) Burkholderia cenocepacia J2315 6929588 YP_002234567.1 CDS BCAM1960 NC_011001.1 2177351 2178295 D calcineurin-like phosphoesterase 2177351..2178295 Burkholderia cenocepacia J2315 6929589 YP_002234568.1 CDS BCAM1961 NC_011001.1 2178315 2178656 D copper binding protein 2178315..2178656 Burkholderia cenocepacia J2315 6929590 YP_002234569.1 CDS BCAM1962A NC_011001.1 2178746 2179207 D hypothetical protein 2178746..2179207 Burkholderia cenocepacia J2315 6929591 YP_002234570.1 CDS BCAM1963 NC_011001.1 2179222 2179563 R hypothetical protein complement(2179222..2179563) Burkholderia cenocepacia J2315 6929592 YP_002234571.1 CDS BCAM1964 NC_011001.1 2179691 2180851 R hypothetical protein complement(2179691..2180851) Burkholderia cenocepacia J2315 6929593 YP_002234572.1 CDS BCAM1965 NC_011001.1 2180937 2181647 R putative hydrolase complement(2180937..2181647) Burkholderia cenocepacia J2315 6929594 YP_002234573.1 CDS BCAM1966 NC_011001.1 2181897 2182205 D ArsR family regulatory protein 2181897..2182205 Burkholderia cenocepacia J2315 6929595 YP_002234574.1 CDS xenB NC_011001.1 2182286 2183347 D putative xenobiotic reductase 2182286..2183347 Burkholderia cenocepacia J2315 6929596 YP_002234575.1 CDS BCAM1968 NC_011001.1 2183366 2183893 R putative acetyltransferase complement(2183366..2183893) Burkholderia cenocepacia J2315 6930664 YP_002234576.1 CDS BCAM1969 NC_011001.1 2184017 2184892 R putative phosphatidylinositol-specific phospholipase C complement(2184017..2184892) Burkholderia cenocepacia J2315 6929597 YP_002234577.1 CDS BCAM1970 NC_011001.1 2184944 2185966 D putative sugar-binding protein 2184944..2185966 Burkholderia cenocepacia J2315 6929598 YP_002234578.1 CDS BCAM1971 NC_011001.1 2185999 2186844 R putative ABC transporter permease complement(2185999..2186844) Burkholderia cenocepacia J2315 6929599 YP_002234579.1 CDS BCAM1972 NC_011001.1 2186856 2187725 R putative ABC transporter permease complement(2186856..2187725) Burkholderia cenocepacia J2315 6929600 YP_002234580.1 CDS BCAM1973 NC_011001.1 2187760 2188998 R putative ABC transporter substrate-binding protein complement(2187760..2188998) Burkholderia cenocepacia J2315 6929601 YP_002234581.1 CDS BCAM1974 NC_011001.1 2189298 2190506 R putative porin complement(2189298..2190506) Burkholderia cenocepacia J2315 6929602 YP_002234582.1 CDS BCAM1975 NC_011001.1 2190674 2191672 R AraC family regulatory protein complement(2190674..2191672) Burkholderia cenocepacia J2315 6929603 YP_002234583.1 CDS BCAM1976 NC_011001.1 2191682 2192281 R hypothetical protein complement(2191682..2192281) Burkholderia cenocepacia J2315 6929604 YP_002234584.1 CDS BCAM1977 NC_011001.1 2192278 2193699 R putative amino acid permease complement(2192278..2193699) Burkholderia cenocepacia J2315 6929605 YP_002234585.1 CDS BCAM1978 NC_011001.1 2194019 2195359 R hypothetical protein complement(2194019..2195359) Burkholderia cenocepacia J2315 6929606 YP_002234586.1 CDS feaB NC_011001.1 2195417 2196919 R phenylacetaldehyde dehydrogenase complement(2195417..2196919) Burkholderia cenocepacia J2315 6929607 YP_002234587.1 CDS BCAM1980 NC_011001.1 2197138 2197335 R hypothetical protein complement(2197138..2197335) Burkholderia cenocepacia J2315 6930456 YP_002234588.1 CDS BCAM1981 NC_011001.1 2197420 2198154 R LuxR superfamily regulatory protein complement(2197420..2198154) Burkholderia cenocepacia J2315 6929608 YP_002234589.1 CDS BCAM1982 NC_011001.1 2198362 2199240 R putative neutral zinc metallopeptidase complement(2198362..2199240) Burkholderia cenocepacia J2315 6929609 YP_002234590.1 CDS BCAM1983 NC_011001.1 2199680 2200471 D putative short chain dehydrogenase 2199680..2200471 Burkholderia cenocepacia J2315 6929610 YP_002234591.1 CDS BCAM1984 NC_011001.1 2200572 2201624 D LysR family regulatory protein 2200572..2201624 Burkholderia cenocepacia J2315 6929611 YP_002234592.1 CDS BCAM1985 NC_011001.1 2201725 2202369 D hypothetical protein 2201725..2202369 Burkholderia cenocepacia J2315 6929612 YP_002234593.1 CDS BCAM1986 NC_011001.1 2202438 2203745 D major facilitator superfamily protein 2202438..2203745 Burkholderia cenocepacia J2315 6929613 YP_002234594.1 CDS BCAM1987 NC_011001.1 2203794 2204495 D hypothetical protein 2203794..2204495 Burkholderia cenocepacia J2315 6929614 YP_002234595.1 CDS BCAM1988 NC_011001.1 2204554 2204697 R No significant database matches.; putative lipoprotein complement(2204554..2204697) Burkholderia cenocepacia J2315 6929615 YP_002234596.1 CDS BCAM1989 NC_011001.1 2204846 2205823 R NAD dependent epimerase/dehydratase family protein complement(2204846..2205823) Burkholderia cenocepacia J2315 6929616 YP_002234597.1 CDS BCAM1990 NC_011001.1 2205923 2206825 D LysR family regulatory protein 2205923..2206825 Burkholderia cenocepacia J2315 6929617 YP_002234598.1 CDS BCAM1991 NC_011001.1 2206856 2207179 R hypothetical protein complement(2206856..2207179) Burkholderia cenocepacia J2315 6929618 YP_002234599.1 CDS BCAM1992 NC_011001.1 2207240 2208112 R LysR family regulatory protein complement(2207240..2208112) Burkholderia cenocepacia J2315 6929619 YP_002234600.1 CDS BCAM1993 NC_011001.1 2208258 2209718 D major facilitator superfamily protein 2208258..2209718 Burkholderia cenocepacia J2315 6929620 YP_002234601.1 CDS BCAM1994 NC_011001.1 2209821 2210027 D No significant database matches.; hypothetical protein 2209821..2210027 Burkholderia cenocepacia J2315 6929621 YP_002234602.1 CDS BCAM1995 NC_011001.1 2210175 2210597 D putative endoribonuclease 2210175..2210597 Burkholderia cenocepacia J2315 6929622 YP_002234603.1 CDS creD NC_011001.1 2210678 2212072 R hypothetical protein complement(2210678..2212072) Burkholderia cenocepacia J2315 6929623 YP_002234604.1 CDS creC NC_011001.1 2212176 2213627 R part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC complement(2212176..2213627) Burkholderia cenocepacia J2315 6930427 YP_002234605.1 CDS BCAM1998 NC_011001.1 2213643 2214356 R response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; DNA-binding response regulator CreB complement(2213643..2214356) Burkholderia cenocepacia J2315 6930426 YP_002234606.1 CDS BCAM1999 NC_011001.1 2214427 2215140 R short chain dehydrogenase complement(2214427..2215140) Burkholderia cenocepacia J2315 6929624 YP_002234607.1 CDS BCAM2000 NC_011001.1 2215428 2216168 D hypothetical protein 2215428..2216168 Burkholderia cenocepacia J2315 6929625 YP_002234608.1 CDS BCAM2001 NC_011001.1 2216262 2217062 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase complement(2216262..2217062) Burkholderia cenocepacia J2315 6929626 YP_002234609.1 CDS BCAM2002 NC_011001.1 2217068 2218012 R hypothetical protein complement(2217068..2218012) Burkholderia cenocepacia J2315 6929627 YP_002234610.1 CDS BCAM2003 NC_011001.1 2218072 2218869 D AraC family regulatory protein 2218072..2218869 Burkholderia cenocepacia J2315 6929628 YP_002234611.1 CDS BCAM2004 NC_011001.1 2219048 2219980 D hypothetical protein 2219048..2219980 Burkholderia cenocepacia J2315 6929629 YP_002234612.1 CDS BCAM2005 NC_011001.1 2220184 2220732 D hypothetical protein 2220184..2220732 Burkholderia cenocepacia J2315 6929630 YP_002234613.1 CDS BCAM2005A NC_011001.1 2220827 2220961 R putative entericidin complement(2220827..2220961) Burkholderia cenocepacia J2315 6929631 YP_002234614.1 CDS pyrB NC_011001.1 2221196 2222491 D catalyzes the conversion of carbamoyl phosphate and aspartate to form N-carbamoyl aspartate; aspartate carbamoyltransferase 2221196..2222491 Burkholderia cenocepacia J2315 6929632 YP_002234615.1 CDS BCAM2007 NC_011001.1 2223574 2225817 D TonB-dependent siderophore receptor 2223574..2225817 Burkholderia cenocepacia J2315 6929634 YP_002234616.1 CDS BCAM2008 NC_011001.1 2225821 2226576 D hypothetical protein 2225821..2226576 Burkholderia cenocepacia J2315 6929635 YP_002234617.1 CDS BCAM2009 NC_011001.1 2226576 2227256 D putative hydroxylase 2226576..2227256 Burkholderia cenocepacia J2315 6929636 YP_002234618.1 CDS BCAM2010 NC_011001.1 2227328 2227564 D hypothetical protein 2227328..2227564 Burkholderia cenocepacia J2315 6929637 YP_002234619.1 CDS BCAM2011 NC_011001.1 2228134 2228718 D hypothetical protein 2228134..2228718 Burkholderia cenocepacia J2315 6929638 YP_002234620.1 CDS BCAM2013 NC_011001.1 2229082 2229840 R short chain dehydrogenase complement(2229082..2229840) Burkholderia cenocepacia J2315 6929639 YP_002234621.1 CDS BCAM2014 NC_011001.1 2229837 2231384 R putative carbohydrate kinase complement(2229837..2231384) Burkholderia cenocepacia J2315 6929640 YP_002234622.1 CDS BCAM2015 NC_011001.1 2231414 2232502 R putative zinc-binding dehydrogenase complement(2231414..2232502) Burkholderia cenocepacia J2315 6929641 YP_002234623.1 CDS BCAM2016 NC_011001.1 2232549 2233556 R ABC transporter permease complement(2232549..2233556) Burkholderia cenocepacia J2315 6929642 YP_002234624.1 CDS BCAM2017 NC_011001.1 2233543 2235120 R ABC transporter ATP-binding protein complement(2233543..2235120) Burkholderia cenocepacia J2315 6929643 YP_002234625.1 CDS BCAM2018 NC_011001.1 2235126 2236067 R ABC transporter substrate-binding protein complement(2235126..2236067) Burkholderia cenocepacia J2315 6929644 YP_002234626.1 CDS BCAM2019 NC_011001.1 2236188 2237147 R AraC family regulatory protein complement(2236188..2237147) Burkholderia cenocepacia J2315 6929645 YP_002234627.1 CDS BCAM2020 NC_011001.1 2237386 2238333 R putative ketopantoate reductase complement(2237386..2238333) Burkholderia cenocepacia J2315 6929646 YP_002234628.1 CDS BCAM2021 NC_011001.1 2238580 2240133 D methyl-accepting chemotaxis protein 2238580..2240133 Burkholderia cenocepacia J2315 6929647 YP_002234629.1 CDS BCAM2022 NC_011001.1 2240153 2240830 R LuxR superfamily regulatory protein complement(2240153..2240830) Burkholderia cenocepacia J2315 6929648 YP_002234630.1 CDS BCAM2023 NC_011001.1 2241207 2241698 D hypothetical protein 2241207..2241698 Burkholderia cenocepacia J2315 6929649 YP_002234631.1 CDS BCAM2024 NC_011001.1 2241726 2242232 R hypothetical protein complement(2241726..2242232) Burkholderia cenocepacia J2315 6929650 YP_002234632.1 CDS BCAM2025 NC_011001.1 2242361 2243782 R sigma-54 interacting regulatory protein complement(2242361..2243782) Burkholderia cenocepacia J2315 6929651 YP_002234633.1 CDS BCAM2026 NC_011001.1 2243906 2244490 R hypothetical protein complement(2243906..2244490) Burkholderia cenocepacia J2315 6929652 YP_002234634.1 CDS BCAM2027 NC_011001.1 2244646 2246217 R hypothetical protein complement(2244646..2246217) Burkholderia cenocepacia J2315 6929653 YP_002234635.1 CDS BCAM2027a NC_011001.1 2246616 2247206 R hypothetical protein complement(2246616..2247206) Burkholderia cenocepacia J2315 6929654 YP_002234636.1 CDS BCAM2031 NC_011001.1 2247318 2247641 R hypothetical protein complement(2247318..2247641) Burkholderia cenocepacia J2315 6929655 YP_002234637.1 CDS BCAM2032 NC_011001.1 2249704 2250711 D Similar to the C-terminal region of Homo sapiens (human) UDP-glucuronic acid decarboxylase 1 UXS1 UniProt:Q8NBZ7 (EMBL:AC018878 (420 aa) fasta scores: E()=6.7e-61, 53.548% id in 310 aa; putative UDP-glucuronic acid decarboxylase 2249704..2250711 Burkholderia cenocepacia J2315 6929656 YP_002234638.1 CDS BCAM2033 NC_011001.1 2250708 2251697 D putative UDP-glucose 4-epimerase 2250708..2251697 Burkholderia cenocepacia J2315 6929657 YP_002234639.1 CDS BCAM2034 NC_011001.1 2251737 2253140 D putative UDP-glucose 6-dehydrogenase 2251737..2253140 Burkholderia cenocepacia J2315 6929658 YP_002234640.1 CDS BCAM2035 NC_011001.1 2253167 2255833 D putative gycosyltransferase 2253167..2255833 Burkholderia cenocepacia J2315 6929659 YP_002234641.1 CDS BCAM2036 NC_011001.1 2255855 2256778 R AraC family regulatory protein complement(2255855..2256778) Burkholderia cenocepacia J2315 6929660 YP_002234642.1 CDS BCAM2037 NC_011001.1 2256958 2257419 D putative [2Fe-2S]-binding protein 2256958..2257419 Burkholderia cenocepacia J2315 6929661 YP_002234643.1 CDS BCAM2038 NC_011001.1 2257422 2259632 D putative oxidoreductase 2257422..2259632 Burkholderia cenocepacia J2315 6929662 YP_002234644.1 CDS BCAM2039 NC_011001.1 2260079 2260477 D putative transcriptional regulator 2260079..2260477 Burkholderia cenocepacia J2315 6929663 YP_002234645.1 CDS bcscQ NC_011001.1 2260932 2262032 D type III secretion system protein 2260932..2262032 Burkholderia cenocepacia J2315 6929664 YP_002234646.1 CDS bcscR NC_011001.1 2262036 2262710 D part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 2262036..2262710 Burkholderia cenocepacia J2315 6930388 YP_002234647.1 CDS virB1 NC_011001.1 2262707 2263492 D type III secretion system protein 2262707..2263492 Burkholderia cenocepacia J2315 6930389 YP_002234648.1 CDS BCAM2044 NC_011001.1 2274989 2276959 R family C44 cysteine peptidase; putative asparagine synthetase complement(2274989..2276959) Burkholderia cenocepacia J2315 6929665 YP_002234649.1 CDS bcscU NC_011001.1 2277231 2278262 R type III secretion system protein complement(2277231..2278262) Burkholderia cenocepacia J2315 6929666 YP_002234650.1 CDS bcscT NC_011001.1 2278279 2279088 R type III secretion system protein complement(2278279..2279088) Burkholderia cenocepacia J2315 6930392 YP_002234651.1 CDS BCAM2047 NC_011001.1 2279082 2279768 R hypothetical protein complement(2279082..2279768) Burkholderia cenocepacia J2315 6930391 YP_002234652.1 CDS bcscN NC_011001.1 2279761 2281134 R type III secretion ssytem protein complement(2279761..2281134) Burkholderia cenocepacia J2315 6929667 YP_002234653.1 CDS bcscL NC_011001.1 2281131 2281760 R type III secretion system protein complement(2281131..2281760) Burkholderia cenocepacia J2315 6930387 YP_002234654.1 CDS bcscK NC_011001.1 2281742 2282482 R type III secretion system protein complement(2281742..2282482) Burkholderia cenocepacia J2315 6930386 YP_002234655.1 CDS bcscJ NC_011001.1 2282479 2283363 R type III secretion system protein complement(2282479..2283363) Burkholderia cenocepacia J2315 6930385 YP_002234656.1 CDS BCAM2052 NC_011001.1 2283417 2283893 R N-terminus is similar to an internal region of Homo sapiens (Human) apoptosis regulator BCL-2 UniProt:P10415 (239 aa) fasta scores: E()=0.64, 37.778% id in 90 aa; hypothetical protein complement(2283417..2283893) Burkholderia cenocepacia J2315 6930384 YP_002234657.1 CDS BCAM2053 NC_011001.1 2284018 2284227 R hypothetical protein complement(2284018..2284227) Burkholderia cenocepacia J2315 6929668 YP_002234658.1 CDS bcscD NC_011001.1 2284368 2285711 R type III secretion system protein complement(2284368..2285711) Burkholderia cenocepacia J2315 6929669 YP_002234659.1 CDS bcscC NC_011001.1 2285692 2287737 R type III secretion system protein complement(2285692..2287737) Burkholderia cenocepacia J2315 6930383 YP_002234660.1 CDS bcscS NC_011001.1 2287737 2288015 R type III secretion system protein complement(2287737..2288015) Burkholderia cenocepacia J2315 6930382 YP_002234661.1 CDS bcscV NC_011001.1 2288012 2290219 R type III secretion system protein complement(2288012..2290219) Burkholderia cenocepacia J2315 6930390 YP_002234662.1 CDS BCAM2058 NC_011001.1 2290470 2291126 R LuxR superfamily regulatory protein complement(2290470..2291126) Burkholderia cenocepacia J2315 6930393 YP_002234663.1 CDS BCAM2059 NC_011001.1 2291632 2292495 D LuxR superfamily regulatory protein 2291632..2292495 Burkholderia cenocepacia J2315 6929670 YP_002234664.1 CDS BCAM2060 NC_011001.1 2292626 2294272 R putative divalent cation transporter complement(2292626..2294272) Burkholderia cenocepacia J2315 6929671 YP_002234665.1 CDS BCAM2062 NC_011001.1 2295616 2295882 D hypothetical protein 2295616..2295882 Burkholderia cenocepacia J2315 6929672 YP_002234666.1 CDS BCAM2063 NC_011001.1 2295973 2297460 D putative carbohydrate-selective porin 2295973..2297460 Burkholderia cenocepacia J2315 6929673 YP_002234667.1 CDS treA NC_011001.1 2297564 2299282 R putative periplasmic trehalase precursor complement(2297564..2299282) Burkholderia cenocepacia J2315 6929674 YP_002234668.1 CDS BCAM2065 NC_011001.1 2299419 2300048 R TetR family regulatory protein complement(2299419..2300048) Burkholderia cenocepacia J2315 6930649 YP_002234669.1 CDS BCAM2066 NC_011001.1 2300462 2301877 D major facilitator superfamily protein 2300462..2301877 Burkholderia cenocepacia J2315 6929675 YP_002234670.1 CDS uppS NC_011001.1 2302271 2303041 D putative undecaprenyl pyrophosphate synthetase 2302271..2303041 Burkholderia cenocepacia J2315 6929676 YP_002234671.1 CDS BCAM2068 NC_011001.1 2303096 2304175 D hypothetical protein 2303096..2304175 Burkholderia cenocepacia J2315 6930658 YP_002234672.1 CDS BCAM2069 NC_011001.1 2304511 2305722 D hypothetical protein 2304511..2305722 Burkholderia cenocepacia J2315 6929677 YP_002234673.1 CDS BCAM2070 NC_011001.1 2305780 2305998 R hypothetical protein complement(2305780..2305998) Burkholderia cenocepacia J2315 6929678 YP_002234674.1 CDS BCAM2071 NC_011001.1 2306056 2306499 R putative acetyltransferase complement(2306056..2306499) Burkholderia cenocepacia J2315 6929679 YP_002234675.1 CDS BCAM2072 NC_011001.1 2306659 2307282 D putative haloacid dehydrogenase hydrolase 2306659..2307282 Burkholderia cenocepacia J2315 6929680 YP_002234676.1 CDS BCAM2073 NC_011001.1 2307669 2308247 D hypothetical protein 2307669..2308247 Burkholderia cenocepacia J2315 6929681 YP_002234677.1 CDS BCAM2074 NC_011001.1 2308329 2308928 R putative acetyltransferase complement(2308329..2308928) Burkholderia cenocepacia J2315 6929682 YP_002234678.1 CDS lysR NC_011001.1 2308985 2309899 R activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; DNA-binding transcriptional regulator LysR complement(2308985..2309899) Burkholderia cenocepacia J2315 6929683 YP_002234679.1 CDS lysA NC_011001.1 2310008 2311246 D catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 2310008..2311246 Burkholderia cenocepacia J2315 6930535 YP_002234680.1 CDS BCAM2077 NC_011001.1 2311441 2312328 R hypothetical protein complement(2311441..2312328) Burkholderia cenocepacia J2315 6930532 YP_002234681.1 CDS BCAM2078 NC_011001.1 2312452 2313936 D GntR family regulatory aminotransferase 2312452..2313936 Burkholderia cenocepacia J2315 6929684 YP_002234682.1 CDS BCAM2079 NC_011001.1 2313979 2315412 R putative nicotinate phosphoribosyltransferase complement(2313979..2315412) Burkholderia cenocepacia J2315 6929685 YP_002234683.1 CDS BCAM2080 NC_011001.1 2315485 2316525 R NadM-Nudix subfamily; involved in creation of nicotanimide adenine dinucleotide NAD from either biosynthetic or salvage pathways; bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase complement(2315485..2316525) Burkholderia cenocepacia J2315 6929686 YP_002234684.1 CDS BCAM2081 NC_011001.1 2316717 2317169 D hypothetical protein 2316717..2317169 Burkholderia cenocepacia J2315 6929687 YP_002234685.1 CDS speD NC_011001.1 2317196 2317615 R putative S-adenosylmethionine decarboxylase proenzyme complement(2317196..2317615) Burkholderia cenocepacia J2315 6929688 YP_002234686.1 CDS BCAM2083 NC_011001.1 2317758 2319275 R hypothetical protein complement(2317758..2319275) Burkholderia cenocepacia J2315 6930644 YP_002234687.1 CDS BCAM2084 NC_011001.1 2319285 2320325 R hypothetical protein complement(2319285..2320325) Burkholderia cenocepacia J2315 6929689 YP_002234688.1 CDS BCAM2085 NC_011001.1 2320353 2320739 R hypothetical protein complement(2320353..2320739) Burkholderia cenocepacia J2315 6929690 YP_002234689.1 CDS BCAM2086 NC_011001.1 2320861 2322375 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 2320861..2322375 Burkholderia cenocepacia J2315 6929691 YP_002234690.1 CDS BCAM2087 NC_011001.1 2322375 2323997 D putative lipoprotein 2322375..2323997 Burkholderia cenocepacia J2315 6929692 YP_002234691.1 CDS BCAM2088 NC_011001.1 2324121 2324885 D putative exported cell wall amidase 2324121..2324885 Burkholderia cenocepacia J2315 6929693 YP_002234692.1 CDS BCAM2089 NC_011001.1 2324939 2325328 D hypothetical protein 2324939..2325328 Burkholderia cenocepacia J2315 6929694 YP_002234693.1 CDS BCAM2090 NC_011001.1 2325394 2325972 D hypothetical protein 2325394..2325972 Burkholderia cenocepacia J2315 6929695 YP_002234694.1 CDS BCAM2091 NC_011001.1 2326030 2326569 D putative acetyltransferase 2326030..2326569 Burkholderia cenocepacia J2315 6929696 YP_002234695.1 CDS BCAM2092 NC_011001.1 2326549 2327484 R LysR family regulatory protein complement(2326549..2327484) Burkholderia cenocepacia J2315 6929697 YP_002234696.1 CDS BCAM2093 NC_011001.1 2327633 2328811 D Similar to codons 85 to 450 of Lycopersicon esculentum (Tomato) zeaxanthin epoxidase, chloroplast precursor. UniProt:P93236 (EMBL:LEZEAXAN) (669 aa) fasta scores: E()=5.8e-16, 27.869% id in 366 aa, and to Burkholderia cenocepacia HI2424 flavoprotein monooxygenase precursor. UniProt:Q4LP64 (EMBL:AAHL01000034) (392 aa) fasta scores: E()=1.1e-142, 96.939% id in 392 aa; putative flavin-binding oxidoreductase 2327633..2328811 Burkholderia cenocepacia J2315 6929698 YP_002234697.1 CDS puuA NC_011001.1 2328835 2330181 R putative gamma-glutamylputrescine synthetase complement(2328835..2330181) Burkholderia cenocepacia J2315 6929699 YP_002234698.1 CDS BCAM2095 NC_011001.1 2330334 2330891 R putative DNA-binding protein complement(2330334..2330891) Burkholderia cenocepacia J2315 6930621 YP_002234699.1 CDS puuB NC_011001.1 2330909 2332198 R putative gamma-glutamylputrescine oxidoreductase complement(2330909..2332198) Burkholderia cenocepacia J2315 6929700 YP_002234700.1 CDS BCAM2097 NC_011001.1 2332744 2335041 R putative isoquinoline 1-oxidoreductase subunit beta complement(2332744..2335041) Burkholderia cenocepacia J2315 6930623 YP_002234701.1 CDS BCAM2098 NC_011001.1 2335038 2335505 R putative isoquinoline 1-oxidoreductase subunit alpha complement(2335038..2335505) Burkholderia cenocepacia J2315 6929701 YP_002234702.1 CDS BCAM2099 NC_011001.1 2336124 2336807 D putative Pfp1 family protein 2336124..2336807 Burkholderia cenocepacia J2315 6929702 YP_002234703.1 CDS BCAM2100 NC_011001.1 2336844 2337317 R MerR family regulatory protein complement(2336844..2337317) Burkholderia cenocepacia J2315 6929703 YP_002234704.1 CDS BCAM2102 NC_011001.1 2337846 2338619 R putative IstB-like ATP binding protein complement(2337846..2338619) Burkholderia cenocepacia J2315 6929704 YP_002234705.1 CDS BCAM2103 NC_011001.1 2338616 2339644 R putative integrase complement(2338616..2339644) Burkholderia cenocepacia J2315 6929705 YP_002234706.1 CDS BCAM2105 NC_011001.1 2340499 2340948 R MerR family regulatory protein complement(2340499..2340948) Burkholderia cenocepacia J2315 6929706 YP_002234707.1 CDS BCAM2106 NC_011001.1 2341287 2342117 D family S33 serine peptidase; non-heme chloroperoxidase 2341287..2342117 Burkholderia cenocepacia J2315 6929707 YP_002234708.1 CDS katA NC_011001.1 2342310 2344520 D Similar to BCAL3299, 76.119% identity (77.166% ungapped) in 737 aa overlap (1-736:1-728); peroxidase/catalase KatA 2342310..2344520 Burkholderia cenocepacia J2315 6929708 YP_002234709.1 CDS BCAM2108 NC_011001.1 2344753 2345784 D putative GroES binding Zinc alcohol dehydrogenase 2344753..2345784 Burkholderia cenocepacia J2315 6930517 YP_002234710.1 CDS BCAM2109 NC_011001.1 2345852 2346664 R family S33 serine peptidase; non-heme chloroperoxidase complement(2345852..2346664) Burkholderia cenocepacia J2315 6929709 YP_002234711.1 CDS BCAM2110 NC_011001.1 2347001 2347807 R putative exported Pfp1 family protein complement(2347001..2347807) Burkholderia cenocepacia J2315 6929710 YP_002234712.1 CDS BCAM2112 NC_011001.1 2348734 2349657 D NAD dependent epimerase/dehydratase family protein 2348734..2349657 Burkholderia cenocepacia J2315 6929712 YP_002234713.1 CDS BCAM2113 NC_011001.1 2350491 2351858 D major facilitator superfamily protein 2350491..2351858 Burkholderia cenocepacia J2315 6929714 YP_002234714.1 CDS BCAM2114 NC_011001.1 2351892 2353082 D putative hydroxylase 2351892..2353082 Burkholderia cenocepacia J2315 6929715 YP_002234715.1 CDS hpaC NC_011001.1 2353114 2353632 D putative 4-hydroxyphenylacetate 3-monooxygenase reductase subunit 2353114..2353632 Burkholderia cenocepacia J2315 6929716 YP_002234716.1 CDS BCAM2116 NC_011001.1 2353629 2354309 D hypothetical protein 2353629..2354309 Burkholderia cenocepacia J2315 6930502 YP_002234717.1 CDS BCAM2117 NC_011001.1 2354353 2355273 D LysR family regulatory protein 2354353..2355273 Burkholderia cenocepacia J2315 6929717 YP_002234718.1 CDS BCAM2118 NC_011001.1 2355457 2356377 R LysR family regulatory protein complement(2355457..2356377) Burkholderia cenocepacia J2315 6929718 YP_002234719.1 CDS BCAM2119 NC_011001.1 2356888 2358546 D carboxylesterase 2356888..2358546 Burkholderia cenocepacia J2315 6929719 YP_002234720.1 CDS BCAM2120 NC_011001.1 2358729 2359667 R metallo-beta-lactamase superfamily protein complement(2358729..2359667) Burkholderia cenocepacia J2315 6929720 YP_002234721.1 CDS BCAM2121 NC_011001.1 2359745 2360788 R catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase complement(2359745..2360788) Burkholderia cenocepacia J2315 6929721 YP_002234722.1 CDS BCAM2122 NC_011001.1 2360785 2361747 R catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase complement(2360785..2361747) Burkholderia cenocepacia J2315 6929722 YP_002234723.1 CDS BCAM2123 NC_011001.1 2361978 2362745 R putative 4-oxalocrotonate decarboxylase complement(2361978..2362745) Burkholderia cenocepacia J2315 6929723 YP_002234724.1 CDS mhpD NC_011001.1 2362760 2363548 R 2-keto-4-pentenoate hydratase complement(2362760..2363548) Burkholderia cenocepacia J2315 6929724 YP_002234725.1 CDS trpC NC_011001.1 2363570 2364355 R indole-3-glycerol phosphate synthase complement(2363570..2364355) Burkholderia cenocepacia J2315 6930551 YP_002234726.1 CDS BCAM2126 NC_011001.1 2364418 2365509 R putative outer membrane porin complement(2364418..2365509) Burkholderia cenocepacia J2315 6930652 YP_002234727.1 CDS BCAM2127 NC_011001.1 2365655 2366896 R N-terminal region is similar to Azospirillum brasilense putative carboxymethylenebutenolidase UniProt:Q43914 (EMBL:X67216 (231 aa) fasta scores: E()=2.4e-26, 40.435% id in 230 aa; putative dienelactone hydrolase family protein complement(2365655..2366896) Burkholderia cenocepacia J2315 6929725 YP_002234728.1 CDS BCAM2128 NC_011001.1 2366945 2367658 R putative short chain dehydrogenase complement(2366945..2367658) Burkholderia cenocepacia J2315 6929726 YP_002234729.1 CDS nbaD NC_011001.1 2367648 2368682 R 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase complement(2367648..2368682) Burkholderia cenocepacia J2315 6929727 YP_002234730.1 CDS nbaC NC_011001.1 2368708 2369241 R catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde in the final enzymatic step of quinolinate biosynthesis; 3-hydroxyanthranilate 3,4-dioxygenase complement(2368708..2369241) Burkholderia cenocepacia J2315 6930562 YP_002234731.1 CDS nbaF NC_011001.1 2369290 2369715 R 2-aminomuconate deaminase complement(2369290..2369715) Burkholderia cenocepacia J2315 6930561 YP_002234732.1 CDS nbaE NC_011001.1 2369712 2371202 R 2-aminomuconate 6-semialdehyde dehydrogenase complement(2369712..2371202) Burkholderia cenocepacia J2315 6930564 YP_002234733.1 CDS BCAM2133 NC_011001.1 2371320 2371625 R hypothetical protein complement(2371320..2371625) Burkholderia cenocepacia J2315 6930563 YP_002234734.1 CDS BCAM2134 NC_011001.1 2371622 2372788 R hypothetical protein complement(2371622..2372788) Burkholderia cenocepacia J2315 6929728 YP_002234735.1 CDS BCAM2135 NC_011001.1 2372813 2374156 R major facilitator superfamily protein complement(2372813..2374156) Burkholderia cenocepacia J2315 6929729 YP_002234736.1 CDS BCAM2136 NC_011001.1 2374278 2375900 R crotonobetaine/carnitine-CoA ligase complement(2374278..2375900) Burkholderia cenocepacia J2315 6929730 YP_002234737.1 CDS BCAM2137 NC_011001.1 2375987 2376895 D LysR family regulatory protein 2375987..2376895 Burkholderia cenocepacia J2315 6929731 YP_002234738.1 CDS BCAM2138 NC_011001.1 2377283 2377510 D hypothetical protein 2377283..2377510 Burkholderia cenocepacia J2315 6929732 YP_002234739.1 CDS BCAM2139 NC_011001.1 2377507 2378067 D hypothetical protein 2377507..2378067 Burkholderia cenocepacia J2315 6929733 YP_002234740.1 CDS BCAM2140 NC_011001.1 2378086 2379258 R transporter system transport protein complement(2378086..2379258) Burkholderia cenocepacia J2315 6929734 YP_002234741.1 CDS BCAM2141 NC_011001.1 2379255 2381474 R ABC transporter ATP-binding membrane protein complement(2379255..2381474) Burkholderia cenocepacia J2315 6929735 YP_002234742.1 CDS BCAM2142 NC_011001.1 2381467 2383266 R Similar, but extended at the N-terminus, to Ralstonia solanacearum (pseudomonas solanacearum) probable typeisecretion system outer membrane efflux transmembrane protein UniProt:Q8XQP1 (EMBL:AL646053 (483 aa) fasta scores: E()=2.3e-102, 68.107% id in 486 aa; transport system outer membrane protein complement(2381467..2383266) Burkholderia cenocepacia J2315 6929736 YP_002234743.1 CDS adhA NC_011001.1 2383411 2392185 R Putative alternative start site at codon 37; cable pilus associated adhesin protein complement(2383411..2392185) Burkholderia cenocepacia J2315 6929737 YP_002234744.1 CDS BCAM2144 NC_011001.1 2393291 2394028 D hypothetical protein 2393291..2394028 Burkholderia cenocepacia J2315 6930335 YP_002234745.1 CDS BCAM2145 NC_011001.1 2394318 2395697 D putative GABA permease 2394318..2395697 Burkholderia cenocepacia J2315 6929738 YP_002234746.1 CDS BCAM2146 NC_011001.1 2395731 2396309 R NnrU family protein complement(2395731..2396309) Burkholderia cenocepacia J2315 6929739 YP_002234747.1 CDS BCAM2147 NC_011001.1 2396611 2397150 R hypothetical protein complement(2396611..2397150) Burkholderia cenocepacia J2315 6929740 YP_002234748.1 CDS BCAM2148 NC_011001.1 2397147 2398256 R hypothetical protein complement(2397147..2398256) Burkholderia cenocepacia J2315 6929741 YP_002234749.1 CDS BCAM2149 NC_011001.1 2398317 2399771 R subfamily M20A metallo peptidase; subfamily M20A metallopeptidase complement(2398317..2399771) Burkholderia cenocepacia J2315 6929742 YP_002234750.1 CDS ftrA NC_011001.1 2399957 2400919 R upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism; transcriptional activator FtrA complement(2399957..2400919) Burkholderia cenocepacia J2315 6929743 YP_002234751.1 CDS BCAM2151 NC_011001.1 2401034 2401453 D hypothetical protein 2401034..2401453 Burkholderia cenocepacia J2315 6929744 YP_002234752.1 CDS BCAM2152 NC_011001.1 2401544 2401870 D hypothetical protein 2401544..2401870 Burkholderia cenocepacia J2315 6929745 YP_002234753.1 CDS BCAM2153 NC_011001.1 2401886 2403046 R putative cytochrome P450 oxidoreductase complement(2401886..2403046) Burkholderia cenocepacia J2315 6929746 YP_002234754.1 CDS BCAM2154 NC_011001.1 2403152 2403394 R hypothetical protein complement(2403152..2403394) Burkholderia cenocepacia J2315 6929747 YP_002234755.1 CDS BCAM2155 NC_011001.1 2403754 2404614 R putative lyase/mutase complement(2403754..2404614) Burkholderia cenocepacia J2315 6929748 YP_002234756.1 CDS BCAM2156 NC_011001.1 2404761 2406428 R hypothetical protein complement(2404761..2406428) Burkholderia cenocepacia J2315 6929749 YP_002234757.1 CDS BCAM2157 NC_011001.1 2406612 2407037 R putative acetyltransferase complement(2406612..2407037) Burkholderia cenocepacia J2315 6929750 YP_002234758.1 CDS BCAM2158 NC_011001.1 2407102 2407962 R putative DNA-binding protein complement(2407102..2407962) Burkholderia cenocepacia J2315 6929751 YP_002234759.1 CDS BCAM2159 NC_011001.1 2408018 2408371 R hypothetical protein complement(2408018..2408371) Burkholderia cenocepacia J2315 6929752 YP_002234760.1 CDS BCAM2160 NC_011001.1 2408606 2409268 D two-component regulatory system response regulator protein 2408606..2409268 Burkholderia cenocepacia J2315 6929753 YP_002234761.1 CDS BCAM2161 NC_011001.1 2409274 2410641 D two-component regulatory system sensor kinase 2409274..2410641 Burkholderia cenocepacia J2315 6929754 YP_002234762.1 CDS BCAM2162 NC_011001.1 2410964 2411410 D MarR family regulatory protein 2410964..2411410 Burkholderia cenocepacia J2315 6929755 YP_002234763.1 CDS BCAM2163 NC_011001.1 2411446 2411814 D putative monooxygenase 2411446..2411814 Burkholderia cenocepacia J2315 6929756 YP_002234764.1 CDS BCAM2164 NC_011001.1 2412399 2412599 D Similar C-terminus of /NCIB 9086/R18194)) hypothetical protein. UniProt:Q399I4 (EMBL:CP000152) (140 aa) fasta scores: E()=6.1e-25, 89.394% id in 66 aa, and similar to Marinobacter aquaeolei VT8 hypothetical protein. UniProt:Q36P97 (EMBL:AALG01000013) (75 aa) fasta scores: E()=6e-06, 42.188% id in 64 aa; hypothetical protein 2412399..2412599 Burkholderia cenocepacia J2315 6929757 YP_002234765.1 CDS penA NC_011001.1 2413082 2414020 R family S11 serine peptidase; putative beta-lactamase complement(2413082..2414020) Burkholderia cenocepacia J2315 6929758 YP_002234766.1 CDS penR NC_011001.1 2414157 2415047 D LysR family regulatory protein 2414157..2415047 Burkholderia cenocepacia J2315 6930596 YP_002234767.1 CDS BCAM2167 NC_011001.1 2415515 2415766 R hypothetical protein complement(2415515..2415766) Burkholderia cenocepacia J2315 6930597 YP_002234768.1 CDS BCAM2168 NC_011001.1 2415863 2418085 R putative amylo-alpha-1,6-glucosidase complement(2415863..2418085) Burkholderia cenocepacia J2315 6929759 YP_002234769.1 CDS BCAM2169 NC_011001.1 2418241 2425338 R Similar to C-terminus from codon 2485 of Burkholderia pseudomallei (Pseudomonas pseudomallei) BpaA. UniProt:Q6Y660 (EMBL:AY177757) (5431 aa) fasta scores: E()=2.3e-47, 26.575% id in 2555 aa, and similar to entire protein of Burkholderia ambifaria AMMD outer membrane autotransporter barrel precursor. UniProt:Q3F6T0 (EMBL:AAJL01000009) (2371 aa) fasta scores: E()=0, 85.799% id in 2366 aa; putative outer membrane autotransporter complement(2418241..2425338) Burkholderia cenocepacia J2315 6929760 YP_002234770.1 CDS BCAM2170 NC_011001.1 2425960 2426619 R Similar, but truncated at the N-terminus, to Burkholderia cenocepacia AU 1054 hypothetical protein precursor. UniProt:Q44UI6 (EMBL:AAHI01000054) (230 aa) fasta scores: E()=4.3e-80, 95.434% id in 219 aa; hypothetical protein complement(2425960..2426619) Burkholderia cenocepacia J2315 6929761 YP_002234771.1 CDS mreB NC_011001.1 2426812 2427846 R rod shape-determining protein MreB complement(2426812..2427846) Burkholderia cenocepacia J2315 6929762 YP_002234772.1 CDS BCAM2172 NC_011001.1 2428119 2430527 D putative patatin-like phospholipase 2428119..2430527 Burkholderia cenocepacia J2315 6930558 YP_002234773.1 CDS BCAM2173 NC_011001.1 2430588 2431214 R FMN-dependent nadh-azoreductase complement(2430588..2431214) Burkholderia cenocepacia J2315 6929763 YP_002234774.1 CDS BCAM2174 NC_011001.1 2431521 2432651 R two-component regulatory system sensor kinase complement(2431521..2432651) Burkholderia cenocepacia J2315 6929764 YP_002234775.1 CDS BCAM2175 NC_011001.1 2432716 2433426 R two-component regulatory system response regulator protein complement(2432716..2433426) Burkholderia cenocepacia J2315 6929765 YP_002234776.1 CDS glsA NC_011001.1 2433646 2434560 D catalyzes the formation of glutamate from glutamine; glutaminase 2433646..2434560 Burkholderia cenocepacia J2315 6929766 YP_002234777.1 CDS BCAM2177 NC_011001.1 2434741 2435391 D hypothetical protein 2434741..2435391 Burkholderia cenocepacia J2315 6930481 YP_002234778.1 CDS BCAM2178 NC_011001.1 2435610 2436245 D putative isochorismatase 2435610..2436245 Burkholderia cenocepacia J2315 6929767 YP_002234779.1 CDS BCAM2179 NC_011001.1 2436271 2437002 R putative ribonuclease complement(2436271..2437002) Burkholderia cenocepacia J2315 6929768 YP_002234780.1 CDS BCAM2180 NC_011001.1 2437233 2437622 D putative peroxiredoxin OsmC family protein 2437233..2437622 Burkholderia cenocepacia J2315 6929769 YP_002234781.1 CDS BCAM2181 NC_011001.1 2437701 2438273 R Similar, but truncated 18 aa to Burkholderia cenocepacia AU 1054 hypothetical protein precursor. UniProt:Q44UH4 (EMBL:AAHI01000054) (208 aa) fasta scores: E()=1.4e-59, 88.021% id in 192 aa; hypothetical protein complement(2437701..2438273) Burkholderia cenocepacia J2315 6929770 YP_002234782.1 CDS BCAM2182 NC_011001.1 2438367 2439770 R hypothetical protein complement(2438367..2439770) Burkholderia cenocepacia J2315 6929771 YP_002234783.1 CDS BCAM2183 NC_011001.1 2440217 2440783 D putative DNA-binding protein 2440217..2440783 Burkholderia cenocepacia J2315 6929772 YP_002234784.1 CDS BCAM2184 NC_011001.1 2440862 2441443 D hypothetical protein 2440862..2441443 Burkholderia cenocepacia J2315 6929773 YP_002234785.1 CDS BCAM2185 NC_011001.1 2441499 2442227 D putative methyltransferase 2441499..2442227 Burkholderia cenocepacia J2315 6929774 YP_002234786.1 CDS BCAM2186 NC_011001.1 2442499 2443692 D putative macrolide-specific efflux system transport protein 2442499..2443692 Burkholderia cenocepacia J2315 6929775 YP_002234787.1 CDS macB NC_011001.1 2443695 2445740 D putative macrolide-specific ABC-type efflux carrier protein 2443695..2445740 Burkholderia cenocepacia J2315 6929776 YP_002234788.1 CDS BCAM2188 NC_011001.1 2445747 2447126 D outer membrane efflux protein 2445747..2447126 Burkholderia cenocepacia J2315 6930537 YP_002234789.1 CDS BCAM2189 NC_011001.1 2447157 2448695 R major facilitator superfamily protein complement(2447157..2448695) Burkholderia cenocepacia J2315 6929777 YP_002234790.1 CDS BCAM2190 NC_011001.1 2448874 2449779 D Similar, but truncated at the N-terminus, to Burkholderia cenocepacia HI2424 regulatory protein, lysr:lysr, substrate-binding. UniProt:Q4LHC0 (EMBL:AAHL01000108) (317 aa) fasta scores: E()=7.6e-115, 99.003% id in 301 aa, and simlar to entire protein of Burkholderia ambifaria AMMD regulatory protein, lysr:lysr, substrate-binding. UniProt:Q3F6U6 (EMBL:AAJL01000009) (301 aa) fasta scores: E()=1.2e-110, 95.017% id in 301 aa; LysR family regulatory protein 2448874..2449779 Burkholderia cenocepacia J2315 6929778 YP_002234791.1 CDS BCAM2191 NC_011001.1 2449846 2450985 R enoyl-CoA hydratase/isomerase family complement(2449846..2450985) Burkholderia cenocepacia J2315 6929779 YP_002234792.1 CDS BCAM2192 NC_011001.1 2450982 2451773 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(2450982..2451773) Burkholderia cenocepacia J2315 6929780 YP_002234793.1 CDS mmsB NC_011001.1 2451773 2452672 R putative 3-hydroxyisobutyrate dehydrogenase complement(2451773..2452672) Burkholderia cenocepacia J2315 6929781 YP_002234794.1 CDS mmsA NC_011001.1 2452691 2454220 R methylmalonate-semialdehyde dehydrogenase complement(2452691..2454220) Burkholderia cenocepacia J2315 6930555 YP_002234795.1 CDS BCAM2195 NC_011001.1 2454335 2456041 R putative AMP-binding protein complement(2454335..2456041) Burkholderia cenocepacia J2315 6930553 YP_002234796.1 CDS BCAM2196 NC_011001.1 2456209 2457342 R putative acyl-CoA dehydrogenase complement(2456209..2457342) Burkholderia cenocepacia J2315 6929782 YP_002234797.1 CDS BCAM2197 NC_011001.1 2457480 2458514 D AraC family regulatory protein 2457480..2458514 Burkholderia cenocepacia J2315 6929783 YP_002234798.1 CDS BCAM2198 NC_011001.1 2458637 2460187 D family S49 serine peptidase 2458637..2460187 Burkholderia cenocepacia J2315 6929784 YP_002234799.1 CDS BCAM2199 NC_011001.1 2460184 2460957 D hypothetical protein 2460184..2460957 Burkholderia cenocepacia J2315 6929785 YP_002234800.1 CDS BCAM2200 NC_011001.1 2461054 2462331 R hypothetical protein complement(2461054..2462331) Burkholderia cenocepacia J2315 6929786 YP_002234801.1 CDS BCAM2201 NC_011001.1 2462736 2463740 D hypothetical protein 2462736..2463740 Burkholderia cenocepacia J2315 6929787 YP_002234802.1 CDS BCAM2202 NC_011001.1 2463781 2465568 D short chain dehydrogenase 2463781..2465568 Burkholderia cenocepacia J2315 6929788 YP_002234803.1 CDS BCAM2203 NC_011001.1 2465598 2466503 D hypothetical protein 2465598..2466503 Burkholderia cenocepacia J2315 6929789 YP_002234804.1 CDS BCAM2204 NC_011001.1 2466588 2466869 D hypothetical protein 2466588..2466869 Burkholderia cenocepacia J2315 6929790 YP_002234805.1 CDS BCAM2205 NC_011001.1 2467122 2467502 D hypothetical protein 2467122..2467502 Burkholderia cenocepacia J2315 6929791 YP_002234806.1 CDS BCAM2206 NC_011001.1 2467768 2468142 D hypothetical protein 2467768..2468142 Burkholderia cenocepacia J2315 6929792 YP_002234807.1 CDS BCAM2207 NC_011001.1 2468314 2468592 R hypothetical protein complement(2468314..2468592) Burkholderia cenocepacia J2315 6929793 YP_002234808.1 CDS BCAM2208 NC_011001.1 2469393 2470694 D putative permease 2469393..2470694 Burkholderia cenocepacia J2315 6929794 YP_002234809.1 CDS BCAM2209 NC_011001.1 2470939 2471226 R hypothetical protein complement(2470939..2471226) Burkholderia cenocepacia J2315 6929795 YP_002234810.1 CDS BCAM2210 NC_011001.1 2471467 2471733 R Similar, but truncated at the N-terminus, to Burkholderia cenocepacia HI2424 hypothetical protein. UniProt:Q4LVF1 (EMBL:AAHL01000012) (153 aa) fasta scores: E()=7.1e-30, 98.864% id in 88 aa, and similar to entire protein of Burkholderia cenocepacia AU 1054 putative membrane protein precursor. UniProt:Q44VA8 (EMBL:AAHI01000046) (63 aa) fasta scores: E()=1.5e-18, 98.413% id in 63 aa, and smiilar, but extended at the N-terminus, to Burkholderia ambifaria AMMD hypothetical protein. UniProt:Q3F6W7 (EMBL:AAJL01000009) (91 aa) fasta scores: E()=4.9e-26, 90.805% id in 87 aa; hypothetical protein complement(2471467..2471733) Burkholderia cenocepacia J2315 6929796 YP_002234811.1 CDS BCAM2211 NC_011001.1 2471919 2473823 D putative sigma-54 activated regulatory protein 2471919..2473823 Burkholderia cenocepacia J2315 6929797 YP_002234812.1 CDS BCAM2212 NC_011001.1 2473896 2474198 D 2Fe-2S iron-sulfur 2473896..2474198 Burkholderia cenocepacia J2315 6929798 YP_002234813.1 CDS BCAM2213 NC_011001.1 2474257 2474751 D hypothetical protein 2474257..2474751 Burkholderia cenocepacia J2315 6929799 YP_002234814.1 CDS BCAM2214 NC_011001.1 2474844 2475221 D hypothetical protein 2474844..2475221 Burkholderia cenocepacia J2315 6929800 YP_002234815.1 CDS BCAM2215 NC_011001.1 2475512 2475877 D putative copper resistance protein C precursor 2475512..2475877 Burkholderia cenocepacia J2315 6929801 YP_002234816.1 CDS BCAM2216 NC_011001.1 2475970 2476413 D Similar, but truncated at the N-terminus, to Burkholderia cenocepacia HI2424 hypothetical protein. UniProt:Q4LVE5 (EMBL:AAHL01000012) (367 aa) fasta scores: E()=2.3e-52, 95.238% id in 147 aa, and similar to entire protein of )/ncib 9086/r18194)). hypothetical protein. UniProt:Q399Q4 (EMBL:AR559934 (148 aa) fasta scores: E()=1.7e-48, 86.486% id in 148 aa; hypothetical protein 2475970..2476413 Burkholderia cenocepacia J2315 6929802 YP_002234817.1 CDS BCAM2217 NC_011001.1 2476717 2477346 D putative LysE family transporter 2476717..2477346 Burkholderia cenocepacia J2315 6929803 YP_002234818.1 CDS BCAM2218 NC_011001.1 2477362 2478756 R putative protein kinase complement(2477362..2478756) Burkholderia cenocepacia J2315 6929804 YP_002234819.1 CDS BCAM2219 NC_011001.1 2478978 2479850 R LysR family regulatory protein complement(2478978..2479850) Burkholderia cenocepacia J2315 6930367 YP_002234820.1 CDS BCAM2220 NC_011001.1 2479990 2481231 D Similar, but truncated at the N-terminus, to Burkholderia cenocepacia AU 1054 general substrate transporter:major facilitator superfamily. UniProt:Q44V97 (EMBL:AAHI01000046) (441 aa) fasta scores: E()=3.4e-128, 98.063% id in 413 aa, and smiilar to entire protein of Burkholderia ambifaria AMMD general substrate transporter:major facilitator superfamily. UniProt:Q3FHP9 (EMBL:AAJL01000001) (417 aa) fasta scores: E()=1.1e-113, 86.441% id in 413 aa; major facilitator superfamily protein 2479990..2481231 Burkholderia cenocepacia J2315 6929806 YP_002234821.1 CDS BCAM2221 NC_011001.1 2481308 2482573 R major facilitator superfamily protein complement(2481308..2482573) Burkholderia cenocepacia J2315 6929807 YP_002234822.1 CDS BCAM2222 NC_011001.1 2482578 2484089 R hypothetical protein complement(2482578..2484089) Burkholderia cenocepacia J2315 6929808 YP_002234823.1 CDS BCAM2223 NC_011001.1 2484091 2484354 R putative iron uptake protein complement(2484091..2484354) Burkholderia cenocepacia J2315 6929809 YP_002234824.1 CDS BCAM2224 NC_011001.1 2484354 2486537 R putative pyochelin receptor protein FptA complement(2484354..2486537) Burkholderia cenocepacia J2315 6929810 YP_002234825.1 CDS BCAM2225 NC_011001.1 2486684 2488450 R ABC transporter ATP-binding membrane protein complement(2486684..2488450) Burkholderia cenocepacia J2315 6929811 YP_002234826.1 CDS BCAM2226 NC_011001.1 2488447 2490168 R ABC transporter ATP-binding membrane protein complement(2488447..2490168) Burkholderia cenocepacia J2315 6929812 YP_002234827.1 CDS pchG NC_011001.1 2490165 2491217 R putative pyochelin biosynthetic protein PchG complement(2490165..2491217) Burkholderia cenocepacia J2315 6929813 YP_002234828.1 CDS pchE NC_011001.1 2496696 2501069 R dihydroaeruginoic acid synthetase PchE complement(2496696..2501069) Burkholderia cenocepacia J2315 6930591 YP_002234829.1 CDS pchR NC_011001.1 2501193 2502311 R Similar to Pseudomonas aeruginosa. PchR UniProt:P40883 (EMBL:AR403595 (296 aa) fasta scores: E()=4.6e-75, 68.571% id in 280 aa, and to Burkholderia cenocepacia HI2424 helix-turn-helix, AraC type. UniProt:Q4LVD0 (EMBL:AAHL01000012) (372 aa) fasta scores: E()=7.6e-146, 97.581% id in 372 aa. Possible alternative start site at codon 60. Burkholderia genome sequencing projects predict the longer CDS, whilst experimental evidence from Pseudomonas aeruginosa predicts the shorter form of the CDS; transcriptional regulator PchR complement(2501193..2502311) Burkholderia cenocepacia J2315 6930590 YP_002234830.1 CDS pchD NC_011001.1 2502352 2504001 D putative pyochelin biosynthetic protein PchD 2502352..2504001 Burkholderia cenocepacia J2315 6930593 YP_002234831.1 CDS pchC NC_011001.1 2503998 2504771 D family S33 serine peptidase; putative pyochelin biosynthetic protein PchC 2503998..2504771 Burkholderia cenocepacia J2315 6930589 YP_002234832.1 CDS pchB NC_011001.1 2504768 2505073 D catalyzes the second reaction in the pyochelin biosynthetic pathway, the conversion of isochorismate to salicylate and pyruvate.; isochorismate-pyruvate lyase 2504768..2505073 Burkholderia cenocepacia J2315 6930588 YP_002234833.1 CDS pchA NC_011001.1 2505070 2506503 D involved in the conversion of chorismate to salicylate; salicylate biosynthesis isochorismate synthase 2505070..2506503 Burkholderia cenocepacia J2315 6930587 YP_002234834.1 CDS BCAM2236 NC_011001.1 2506516 2507400 R LysR family regulatory protein complement(2506516..2507400) Burkholderia cenocepacia J2315 6930586 YP_002234835.1 CDS BCAM2237 NC_011001.1 2507478 2508779 D putative 2,2-dialkylglycine decarboxylase 2507478..2508779 Burkholderia cenocepacia J2315 6929814 YP_002234836.1 CDS BCAM2238 NC_011001.1 2508848 2509597 R putative short-chain dehydrogenase/reductase complement(2508848..2509597) Burkholderia cenocepacia J2315 6929815 YP_002234837.1 CDS BCAM2239 NC_011001.1 2509639 2510613 D AraC family regulatory protein 2509639..2510613 Burkholderia cenocepacia J2315 6929816 YP_002234838.1 CDS BCAM2240 NC_011001.1 2510690 2511547 D AraC family regulatory protein 2510690..2511547 Burkholderia cenocepacia J2315 6929817 YP_002234839.1 CDS BCAM2241 NC_011001.1 2511592 2511999 D hypothetical protein 2511592..2511999 Burkholderia cenocepacia J2315 6929818 YP_002234840.1 CDS BCAM2242 NC_011001.1 2512030 2512380 R glyoxylase/bleomycin resistance protein/dioxygenase family protein complement(2512030..2512380) Burkholderia cenocepacia J2315 6929819 YP_002234841.1 CDS BCAM2243 NC_011001.1 2512446 2513369 R hypothetical protein complement(2512446..2513369) Burkholderia cenocepacia J2315 6929820 YP_002234842.1 CDS BCAM2244 NC_011001.1 2513383 2514369 R hypothetical protein complement(2513383..2514369) Burkholderia cenocepacia J2315 6929821 YP_002234843.1 CDS BCAM2245 NC_011001.1 2514399 2515379 R hypothetical protein complement(2514399..2515379) Burkholderia cenocepacia J2315 6929822 YP_002234844.1 CDS BCAM2246 NC_011001.1 2515513 2516364 D LysR family regulatory protein 2515513..2516364 Burkholderia cenocepacia J2315 6929823 YP_002234845.1 CDS BCAM2247 NC_011001.1 2516458 2517159 R putative amino acid ABC transporter ATP-binding protein complement(2516458..2517159) Burkholderia cenocepacia J2315 6929824 YP_002234846.1 CDS livG NC_011001.1 2517159 2517932 R Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit complement(2517159..2517932) Burkholderia cenocepacia J2315 6929825 YP_002234847.1 CDS livM NC_011001.1 2517929 2519200 R Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit complement(2517929..2519200) Burkholderia cenocepacia J2315 6930402 YP_002234848.1 CDS BCAM2250 NC_011001.1 2519212 2520171 R putative amino acid ABC transporter permease complement(2519212..2520171) Burkholderia cenocepacia J2315 6930401 YP_002234849.1 CDS BCAM2251 NC_011001.1 2520322 2521440 R putative amino acid ABC transporter solute binding protein complement(2520322..2521440) Burkholderia cenocepacia J2315 6929826 YP_002234850.1 CDS BCAM2251A NC_011001.1 2523060 2523458 R hypothetical protein complement(2523060..2523458) Burkholderia cenocepacia J2315 6929827 YP_002234851.1 CDS BCAM2253 NC_011001.1 2525066 2529613 R RHS-family protein complement(2525066..2529613) Burkholderia cenocepacia J2315 6929829 YP_002234852.1 CDS BCAM2253A NC_011001.1 2529621 2530043 R hypothetical protein complement(2529621..2530043) Burkholderia cenocepacia J2315 6929830 YP_002234853.1 CDS BCAM2254 NC_011001.1 2530065 2532185 R Similar to, but truncated at the N-terminus to ) salmonella enterica subsp. enterica serovar typhimurium. vrgs UniProt:Q93IR3 (EMBL:AJ320483 (729 aa) fasta scores: E()=9.6e-45, 29.595% id in 740 aa, and simlar to entire protein of ) burkholderia cenocepacia hi2424. rhs element vgr protein precursor. UniProt:Q4LVA4 (EMBL:AAHL01000012 (706 aa) fasta scores: E()=0, 98.017% id in 706 aa; hypothetical protein complement(2530065..2532185) Burkholderia cenocepacia J2315 6929831 YP_002234854.1 CDS BCAM2255 NC_011001.1 2532590 2533099 R putative OmpA/MotB family outer membrane protein complement(2532590..2533099) Burkholderia cenocepacia J2315 6929832 YP_002234855.1 CDS BCAM2256 NC_011001.1 2533186 2534454 R putative cyclic-di-GMP signaling protein complement(2533186..2534454) Burkholderia cenocepacia J2315 6929833 YP_002234856.1 CDS BCAM2257 NC_011001.1 2534451 2535146 R hypothetical protein complement(2534451..2535146) Burkholderia cenocepacia J2315 6929834 YP_002234857.1 CDS BCAM2258 NC_011001.1 2535585 2536472 D LysR family regulatory protein 2535585..2536472 Burkholderia cenocepacia J2315 6929835 YP_002234858.1 CDS dan NC_011001.1 2536642 2538153 D putative D-aminoacylase 2536642..2538153 Burkholderia cenocepacia J2315 6929836 YP_002234859.1 CDS BCAM2260 NC_011001.1 2538150 2539490 D major facilitator superfamily protein 2538150..2539490 Burkholderia cenocepacia J2315 6930437 YP_002234860.1 CDS BCAM2261 NC_011001.1 2539487 2540845 D putative amidase 2539487..2540845 Burkholderia cenocepacia J2315 6929837 YP_002234861.1 CDS BCAM2262 NC_011001.1 2540943 2543189 R putative aldehyde oxidase/xanthine dehydrogenase family protein complement(2540943..2543189) Burkholderia cenocepacia J2315 6929838 YP_002234862.1 CDS BCAM2263 NC_011001.1 2543191 2543685 R putative isoquinoline 1-oxidoreductase subunit alpha complement(2543191..2543685) Burkholderia cenocepacia J2315 6929839 YP_002234863.1 CDS BCAM2264 NC_011001.1 2543803 2544696 D LysR family regulatory protein 2543803..2544696 Burkholderia cenocepacia J2315 6929840 YP_002234864.1 CDS BCAM2265 NC_011001.1 2544707 2545597 R LysR family regulatory protein complement(2544707..2545597) Burkholderia cenocepacia J2315 6929841 YP_002234865.1 CDS BCAM2266 NC_011001.1 2545839 2546741 D putative amidohydrolase 2545839..2546741 Burkholderia cenocepacia J2315 6929842 YP_002234866.1 CDS BCAM2267 NC_011001.1 2546776 2547681 D putative amidohydrolase 2546776..2547681 Burkholderia cenocepacia J2315 6929843 YP_002234867.1 CDS BCAM2268 NC_011001.1 2547757 2549151 D putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2547757..2549151 Burkholderia cenocepacia J2315 6929844 YP_002234868.1 CDS ubiX NC_011001.1 2549148 2549762 D putative flavoprotein 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2549148..2549762 Burkholderia cenocepacia J2315 6929845 YP_002234869.1 CDS BCAM2270 NC_011001.1 2549759 2550862 D putative cobalamin biosynthesis protein 2549759..2550862 Burkholderia cenocepacia J2315 6930657 YP_002234870.1 CDS BCAM2271 NC_011001.1 2550924 2552297 D putative permease 2550924..2552297 Burkholderia cenocepacia J2315 6929846 YP_002234871.1 CDS BCAM2272 NC_011001.1 2552385 2553767 D amidohydrolase 2552385..2553767 Burkholderia cenocepacia J2315 6929847 YP_002234872.1 CDS BCAM2273 NC_011001.1 2553782 2554507 D putative arylmalonate decarboxylase 2553782..2554507 Burkholderia cenocepacia J2315 6929848 YP_002234873.1 CDS BCAM2274a NC_011001.1 2554518 2555015 R hypothetical protein complement(2554518..2555015) Burkholderia cenocepacia J2315 6929849 YP_002234874.1 CDS BCAM2275 NC_011001.1 2555012 2556184 R putative DNA-binding protein complement(2555012..2556184) Burkholderia cenocepacia J2315 6929850 YP_002234875.1 CDS BCAM2276 NC_011001.1 2556583 2557824 D putative FAD dependent oxidoreductase 2556583..2557824 Burkholderia cenocepacia J2315 6929851 YP_002234876.1 CDS BCAM2277 NC_011001.1 2557875 2559020 R putative FMN-dependent dehydrogenase complement(2557875..2559020) Burkholderia cenocepacia J2315 6929852 YP_002234877.1 CDS BCAM2278 NC_011001.1 2559203 2559970 R GntR family regulatory protein complement(2559203..2559970) Burkholderia cenocepacia J2315 6929853 YP_002234878.1 CDS BCAM2279 NC_011001.1 2560038 2560928 R putative amidohydrolase complement(2560038..2560928) Burkholderia cenocepacia J2315 6929854 YP_002234879.1 CDS BCAM2280 NC_011001.1 2560992 2561933 R putative ABC transporter solute-binding protein complement(2560992..2561933) Burkholderia cenocepacia J2315 6929855 YP_002234880.1 CDS BCAM2281 NC_011001.1 2562016 2563053 R putative ABC transporter transmembrane protein complement(2562016..2563053) Burkholderia cenocepacia J2315 6929856 YP_002234881.1 CDS BCAM2282 NC_011001.1 2563081 2564619 R ABC transporter ATP-binding protein complement(2563081..2564619) Burkholderia cenocepacia J2315 6929857 YP_002234882.1 CDS BCAM2283 NC_011001.1 2564632 2565408 R short chain dehydrogenase complement(2564632..2565408) Burkholderia cenocepacia J2315 6929858 YP_002234883.1 CDS BCAM2284 NC_011001.1 2565479 2566756 R putative mrandelate racemase/muconate lactonizing enzyme complement(2565479..2566756) Burkholderia cenocepacia J2315 6929859 YP_002234884.1 CDS BCAM2285 NC_011001.1 2566780 2567622 R putative fumarylacetoacetate (FAA) hydrolase family protein complement(2566780..2567622) Burkholderia cenocepacia J2315 6929860 YP_002234885.1 CDS BCAM2286 NC_011001.1 2567680 2568450 R putative short chain dehydrogenase complement(2567680..2568450) Burkholderia cenocepacia J2315 6929861 YP_002234886.1 CDS BCAM2287 NC_011001.1 2569114 2569404 D hypothetical protein 2569114..2569404 Burkholderia cenocepacia J2315 6929862 YP_002234887.1 CDS BCAM2288 NC_011001.1 2569554 2570552 D putative short-chain dehydrogenase 2569554..2570552 Burkholderia cenocepacia J2315 6929863 YP_002234888.1 CDS BCAM2289 NC_011001.1 2570842 2571066 D hypothetical protein 2570842..2571066 Burkholderia cenocepacia J2315 6929864 YP_002234889.1 CDS BCAM2290 NC_011001.1 2571260 2572465 R putative gamma-butyrobetaine dioxygenase complement(2571260..2572465) Burkholderia cenocepacia J2315 6929865 YP_002234890.1 CDS BCAM2291 NC_011001.1 2572489 2573445 R family S9 unassigned serine peptidase; putative hydrolase complement(2572489..2573445) Burkholderia cenocepacia J2315 6929866 YP_002234891.1 CDS BCAM2292 NC_011001.1 2573496 2573948 R hypothetical protein complement(2573496..2573948) Burkholderia cenocepacia J2315 6929867 YP_002234892.1 CDS BCAM2293 NC_011001.1 2573988 2574953 R converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase complement(2573988..2574953) Burkholderia cenocepacia J2315 6929868 YP_002234893.1 CDS BCAM2294 NC_011001.1 2575047 2575976 R hypothetical protein complement(2575047..2575976) Burkholderia cenocepacia J2315 6929869 YP_002234894.1 CDS BCAM2295 NC_011001.1 2576038 2576991 R putative ABC transporter solute-binding protein complement(2576038..2576991) Burkholderia cenocepacia J2315 6929870 YP_002234895.1 CDS BCAM2296 NC_011001.1 2577655 2578536 R LysR family regulatory protein complement(2577655..2578536) Burkholderia cenocepacia J2315 6929871 YP_002234896.1 CDS BCAM2297 NC_011001.1 2578658 2579101 D Similar, but truncated at the N-terminus, to Burkholderia cenocepacia AU 1054. hypothetical protein. UniProt:Q45D44 (EMBL:AAHI01000001 (190 aa) fasta scores: E()=2.6e-45, 97.959% id in 147 aa, and similar, but truncated at the N-terminus, to Burkholderia cenocepacia hi2424. hypothetical protein. UniProt:Q4LV74 (EMBL:AAHL01000012 (190 aa) fasta scores: E()=2.6e-45, 97.959% id in 147 aa, and similar to entire protein of to )/ncib 9086/r18194)). hypothetical protein. UniProt:Q399Y9 (EMBL:CP000152 (147 aa) fasta scores: E()=2e-44, 93.197% id in 147 aa; hypothetical protein 2578658..2579101 Burkholderia cenocepacia J2315 6929872 YP_002234897.1 CDS BCAM2298 NC_011001.1 2579156 2580667 R putative phenylacetaldehyde dehydrogenase complement(2579156..2580667) Burkholderia cenocepacia J2315 6929873 YP_002234898.1 CDS BCAM2299 NC_011001.1 2580695 2581183 R putative cytochrome c complement(2580695..2581183) Burkholderia cenocepacia J2315 6929874 YP_002234899.1 CDS BCAM2300 NC_011001.1 2581222 2581683 R putative cytochrome c complement(2581222..2581683) Burkholderia cenocepacia J2315 6929875 YP_002234900.1 CDS BCAM2301 NC_011001.1 2581719 2582264 R putative methylamine dehydrogenase complement(2581719..2582264) Burkholderia cenocepacia J2315 6929876 YP_002234901.1 CDS BCAM2302A NC_011001.1 2582304 2582927 R putative methylamine utilization protein complement(2582304..2582927) Burkholderia cenocepacia J2315 6929877 YP_002234902.1 CDS BCAM2303 NC_011001.1 2582927 2583481 R putative methylamine utilization protein complement(2582927..2583481) Burkholderia cenocepacia J2315 6929878 YP_002234903.1 CDS BCAM2304 NC_011001.1 2583489 2584646 R putative amine dehydrogenase complement(2583489..2584646) Burkholderia cenocepacia J2315 6929879 YP_002234904.1 CDS BCAM2305 NC_011001.1 2584887 2585849 D AraC family regulatory protein 2584887..2585849 Burkholderia cenocepacia J2315 6929880 YP_002234905.1 CDS BCAM2306 NC_011001.1 2585977 2586921 D AraC family regulatory protein 2585977..2586921 Burkholderia cenocepacia J2315 6929881 YP_002234906.1 CDS zmpB NC_011001.1 2587413 2589125 D family M4 metallo peptidase; zinc metalloprotease ZmpB 2587413..2589125 Burkholderia cenocepacia J2315 6929882 YP_002234907.1 CDS BCAM2308 NC_011001.1 2589205 2590455 D subfamily M24B metallo peptidase; putative leucyl aminopeptidase precursor 2589205..2590455 Burkholderia cenocepacia J2315 6930667 YP_002234908.1 CDS BCAM2309 NC_011001.1 2590588 2590956 D hypothetical protein 2590588..2590956 Burkholderia cenocepacia J2315 6929883 YP_002234909.1 CDS BCAM2310 NC_011001.1 2591147 2592397 R major facilitator superfamily protein complement(2591147..2592397) Burkholderia cenocepacia J2315 6929884 YP_002234910.1 CDS BCAM2311 NC_011001.1 2592641 2593780 R putative outer membrane porin protein complement(2592641..2593780) Burkholderia cenocepacia J2315 6929885 YP_002234911.1 CDS BCAM2312 NC_011001.1 2594041 2595009 R putative glycine betaine transporter substrate binding protein complement(2594041..2595009) Burkholderia cenocepacia J2315 6929886 YP_002234912.1 CDS betC NC_011001.1 2595055 2596590 R putative choline-sulfatase complement(2595055..2596590) Burkholderia cenocepacia J2315 6929887 YP_002234913.1 CDS BCAM2314 NC_011001.1 2596807 2597733 D LysR family regulatory protein 2596807..2597733 Burkholderia cenocepacia J2315 6930397 YP_002234914.1 CDS purU NC_011001.1 2597914 2598798 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2597914..2598798 Burkholderia cenocepacia J2315 6929888 YP_002234915.1 CDS BCAM2316 NC_011001.1 2598972 2600627 R putative amino acid permease complement(2598972..2600627) Burkholderia cenocepacia J2315 6930620 YP_002234916.1 CDS BCAM2317 NC_011001.1 2600806 2601669 R hypothetical protein complement(2600806..2601669) Burkholderia cenocepacia J2315 6929889 YP_002234917.1 CDS BCAM2318 NC_011001.1 2601804 2602952 R putative ferredoxin oxidoreductase complement(2601804..2602952) Burkholderia cenocepacia J2315 6929890 YP_002234918.1 CDS BCAM2319 NC_011001.1 2602982 2604223 R iron-sulphur Rieske protein complement(2602982..2604223) Burkholderia cenocepacia J2315 6929891 YP_002234919.1 CDS etfB NC_011001.1 2604276 2605061 R putative electron transfer flavoprotein subunit beta complement(2604276..2605061) Burkholderia cenocepacia J2315 6929892 YP_002234920.1 CDS etfA NC_011001.1 2605058 2606227 R putative electron transfer flavoprotein subunit alpha complement(2605058..2606227) Burkholderia cenocepacia J2315 6930448 YP_002234921.1 CDS BCAM2322 NC_011001.1 2606232 2608157 R putative iron-sulfur cluster membrane protein complement(2606232..2608157) Burkholderia cenocepacia J2315 6930447 YP_002234922.1 CDS BCAM2323 NC_011001.1 2608161 2610224 R putative N-methylproline demethylase complement(2608161..2610224) Burkholderia cenocepacia J2315 6929893 YP_002234923.1 CDS BCAM2324 NC_011001.1 2610293 2610826 R hypothetical protein complement(2610293..2610826) Burkholderia cenocepacia J2315 6929894 YP_002234924.1 CDS BCAM2325 NC_011001.1 2610966 2611937 R putative dipeptidase complement(2610966..2611937) Burkholderia cenocepacia J2315 6929895 YP_002234925.1 CDS glyA NC_011001.1 2611977 2613251 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(2611977..2613251) Burkholderia cenocepacia J2315 6929896 YP_002234926.1 CDS BCAM2327 NC_011001.1 2613607 2614722 D AraC family regulatory protein 2613607..2614722 Burkholderia cenocepacia J2315 6930483 YP_002234927.1 CDS BCAM2328 NC_011001.1 2614783 2616192 R C-terminus is similar to Cellvibrio mixtus. CelC UniProt:Q336L6 (EMBL:AF003697 (1050 aa) fasta scores: E()=1.4e-11, 29.915% id in 234 aa, and to Burkholderia cenocepacia hi2424. coagulation factor 5/8 type, c-terminal:coagulation factor 5/8 type, c-terminal precursor. UniProt:Q4LV43 (EMBL:AAHL01000012 (487 aa) fasta scores: E()=8.5e-175, 96.802% id in 469 aa; hypothetical protein complement(2614783..2616192) Burkholderia cenocepacia J2315 6929897 YP_002234928.1 CDS BCAM2329 NC_011001.1 2616468 2617889 D GntR family regulatory protein 2616468..2617889 Burkholderia cenocepacia J2315 6929898 YP_002234929.1 CDS BCAM2330 NC_011001.1 2618093 2618866 D hypothetical protein 2618093..2618866 Burkholderia cenocepacia J2315 6929899 YP_002234930.1 CDS BCAM2331 NC_011001.1 2619030 2619917 D hypothetical protein 2619030..2619917 Burkholderia cenocepacia J2315 6929900 YP_002234931.1 CDS BCAM2332 NC_011001.1 2619906 2620820 R LysR family regulatory protein complement(2619906..2620820) Burkholderia cenocepacia J2315 6929901 YP_002234932.1 CDS fdhA NC_011001.1 2620974 2622170 R putative glutathione-independent formaldehyde dehydrogenase complement(2620974..2622170) Burkholderia cenocepacia J2315 6929902 YP_002234933.1 CDS BCAM2334 NC_011001.1 2622397 2623587 R efflux system transport protein complement(2622397..2623587) Burkholderia cenocepacia J2315 6930452 YP_002234934.1 CDS BCAM2335 NC_011001.1 2623587 2625455 R outer membrane efflux protein complement(2623587..2625455) Burkholderia cenocepacia J2315 6929903 YP_002234935.1 CDS BCAM2336 NC_011001.1 2625452 2626390 R putative sugar transferase complement(2625452..2626390) Burkholderia cenocepacia J2315 6929904 YP_002234936.1 CDS BCAM2337 NC_011001.1 2626401 2628002 R putative multidrug resistance transporter protein complement(2626401..2628002) Burkholderia cenocepacia J2315 6929905 YP_002234937.1 CDS BCAM2338 NC_011001.1 2627999 2629282 R putative glycosyltransferase complement(2627999..2629282) Burkholderia cenocepacia J2315 6929906 YP_002234938.1 CDS BCAM2339 NC_011001.1 2629300 2629869 R putative methyltransferase complement(2629300..2629869) Burkholderia cenocepacia J2315 6929907 YP_002234939.1 CDS phaG NC_011001.1 2629937 2630839 R family S33 serine peptidase; putative (R)-3-hydroxydecanoyl-ACP:CoA transacylase complement(2629937..2630839) Burkholderia cenocepacia J2315 6929908 YP_002234940.1 CDS betI NC_011001.1 2631561 2632145 D HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 2631561..2632145 Burkholderia cenocepacia J2315 6930599 YP_002234941.1 CDS betB NC_011001.1 2632178 2633647 D catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 2632178..2633647 Burkholderia cenocepacia J2315 6930398 YP_002234942.1 CDS betA NC_011001.1 2633664 2635364 D catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 2633664..2635364 Burkholderia cenocepacia J2315 6930396 YP_002234943.1 CDS BCAM2344 NC_011001.1 2635438 2636541 R hypothetical protein complement(2635438..2636541) Burkholderia cenocepacia J2315 6930395 YP_002234944.1 CDS BCAM2345 NC_011001.1 2636803 2637462 D no significant database hits; hypothetical protein 2636803..2637462 Burkholderia cenocepacia J2315 6929909 YP_002234945.1 CDS BCAM2346 NC_011001.1 2637580 2638404 R putative OmpW-family exported protein complement(2637580..2638404) Burkholderia cenocepacia J2315 6929910 YP_002234946.1 CDS BCAM2347 NC_011001.1 2638478 2639731 R putative lipoprotein complement(2638478..2639731) Burkholderia cenocepacia J2315 6929911 YP_002234947.1 CDS BCAM2348 NC_011001.1 2639803 2641401 R putative lipoprotein complement(2639803..2641401) Burkholderia cenocepacia J2315 6929912 YP_002234948.1 CDS BCAM2349A NC_011001.1 2642031 2642327 R hypothetical protein complement(2642031..2642327) Burkholderia cenocepacia J2315 6929913 YP_002234949.1 CDS BCAM2350 NC_011001.1 2642752 2643696 D ABC transporter ATP-binding protein 2642752..2643696 Burkholderia cenocepacia J2315 6929914 YP_002234950.1 CDS BCAM2351 NC_011001.1 2643700 2644461 D putative ABC transporter transmembrane protein 2643700..2644461 Burkholderia cenocepacia J2315 6929915 YP_002234951.1 CDS BCAM2352 NC_011001.1 2644621 2646045 D major facilitator superfamily protein 2644621..2646045 Burkholderia cenocepacia J2315 6929916 YP_002234952.1 CDS BCAM2353 NC_011001.1 2646354 2646584 R hypothetical protein complement(2646354..2646584) Burkholderia cenocepacia J2315 6929917 YP_002234953.1 CDS BCAM2354 NC_011001.1 2646740 2648506 D hybrid two-component system kinase-response regulator protein 2646740..2648506 Burkholderia cenocepacia J2315 6929918 YP_002234954.1 CDS BCAM2355 NC_011001.1 2648667 2649098 D hypothetical protein 2648667..2649098 Burkholderia cenocepacia J2315 6929919 YP_002234955.1 CDS BCAM2356 NC_011001.1 2649208 2650014 D hypothetical protein 2649208..2650014 Burkholderia cenocepacia J2315 6929920 YP_002234956.1 CDS BCAM2357 NC_011001.1 2650011 2650751 D putative alpha/beta hydrolase 2650011..2650751 Burkholderia cenocepacia J2315 6929921 YP_002234957.1 CDS BCAM2358 NC_011001.1 2650848 2651720 D family S9 unassigned serine peptidase; putative esterase 2650848..2651720 Burkholderia cenocepacia J2315 6929922 YP_002234958.1 CDS BCAM2358A NC_011001.1 2651886 2652116 R hypothetical protein complement(2651886..2652116) Burkholderia cenocepacia J2315 6929923 YP_002234959.1 CDS BCAM2359 NC_011001.1 2652324 2653223 R hypothetical protein complement(2652324..2653223) Burkholderia cenocepacia J2315 6929924 YP_002234960.1 CDS BCAM2359A NC_011001.1 2653302 2653640 D putative DNA-binding protein 2653302..2653640 Burkholderia cenocepacia J2315 6929925 YP_002234961.1 CDS pqqE NC_011001.1 2653851 2654990 R pyrroloquinoline quinone biosynthesis protein PqqE complement(2653851..2654990) Burkholderia cenocepacia J2315 6929926 YP_002234962.1 CDS pqqD NC_011001.1 2654992 2655273 R coenzyme PQQ synthesis protein D complement(2654992..2655273) Burkholderia cenocepacia J2315 6930614 YP_002234963.1 CDS pqqC NC_011001.1 2655273 2655989 R Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC complement(2655273..2655989) Burkholderia cenocepacia J2315 6930613 YP_002234964.1 CDS pqqB NC_011001.1 2655992 2656915 R possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB complement(2655992..2656915) Burkholderia cenocepacia J2315 6930612 YP_002234965.1 CDS pqqA NC_011001.1 2656977 2657051 R Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme; coenzyme PQQ synthesis protein PqqA complement(2656977..2657051) Burkholderia cenocepacia J2315 6930611 YP_002234966.1 CDS BCAM2365 NC_011001.1 2657367 2659397 R putative signal-transduction and transcriptional regulator Fis and NtrC family protein complement(2657367..2659397) Burkholderia cenocepacia J2315 6930610 YP_002234967.1 CDS pip NC_011001.1 2659703 2660701 D family S33 serine peptidase; putative proline iminopeptidase 2659703..2660701 Burkholderia cenocepacia J2315 6929927 YP_002234968.1 CDS BCAM2367 NC_011001.1 2660771 2663104 R TonB-dependent receptor complement(2660771..2663104) Burkholderia cenocepacia J2315 6930603 YP_002234969.1 CDS BCAM2368 NC_011001.1 2663518 2665257 D putative quinoprotein ethanol dehydrogenase precursor 2663518..2665257 Burkholderia cenocepacia J2315 6929928 YP_002234970.1 CDS BCAM2369 NC_011001.1 2665338 2666534 D Similar, but truncated at the N-terminus, to burkholderia cenocepacia au 1054. cytochrome c, class i. UniProt:Q45DB5 (EMBL:AAHI01000001 (470 aa) fasta scores: E()=1.1e-148, 97.236% id in 398 aa; putative cytochrome c 2665338..2666534 Burkholderia cenocepacia J2315 6929929 YP_002234971.1 CDS hip NC_011001.1 2666633 2666947 D Similar, but extended at the N-terminus, to Rhodoferax fermentans hip high-potential iron-sulfur protein (hipip). UniProt:P80882 (75 aa) fasta scores: E()=1.1e-11, 48.684% id in 76 aa, and similar to entire protein of burkholderia cenocepacia hi2424. high potential iron-sulfur protein precursor. UniProt:Q4LWY0 (EMBL:AAHL01000008 (104 aa) fasta scores: E()=2.1e-42, 98.077% id in 104 aa; putative high-potential iron-sulfur protein 2666633..2666947 Burkholderia cenocepacia J2315 6929930 YP_002234972.1 CDS BCAM2371 NC_011001.1 2666931 2668817 D putative RNA polymerase sigma-subunit 2666931..2668817 Burkholderia cenocepacia J2315 6930492 YP_002234973.1 CDS acsA NC_011001.1 2669012 2671048 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2669012..2671048 Burkholderia cenocepacia J2315 6929931 YP_002234974.1 CDS BCAM2373 NC_011001.1 2671264 2672334 D putative outer membrane porin 2671264..2672334 Burkholderia cenocepacia J2315 6930329 YP_002234975.1 CDS BCAM2374 NC_011001.1 2672345 2673991 D putative methyl-accepting chemotaxis protein 2672345..2673991 Burkholderia cenocepacia J2315 6929932 YP_002234976.1 CDS BCAM2376 NC_011001.1 2674886 2676154 D permease 2674886..2676154 Burkholderia cenocepacia J2315 6929934 YP_002234977.1 CDS BCAM2377 NC_011001.1 2676181 2677026 R hypothetical protein complement(2676181..2677026) Burkholderia cenocepacia J2315 6929935 YP_002234978.1 CDS pepX NC_011001.1 2677544 2679514 D catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase 2677544..2679514 Burkholderia cenocepacia J2315 6929936 YP_002234979.1 CDS BCAM2379 NC_011001.1 2679647 2680015 D NUDIX hydrolase 2679647..2680015 Burkholderia cenocepacia J2315 6930598 YP_002234980.1 CDS BCAM2380 NC_011001.1 2680037 2680966 R putative D-isomer specific 2-hydroxyacid dehydrogenase complement(2680037..2680966) Burkholderia cenocepacia J2315 6929937 YP_002234981.1 CDS BCAM2381 NC_011001.1 2681134 2682057 D putative ABC transportrt exported protein 2681134..2682057 Burkholderia cenocepacia J2315 6929938 YP_002234982.1 CDS BCAM2382 NC_011001.1 2682054 2683232 D putative ABC transporter system permease 2682054..2683232 Burkholderia cenocepacia J2315 6929939 YP_002234983.1 CDS BCAM2383 NC_011001.1 2683229 2684182 D ABC transporter ATP-binding protein 2683229..2684182 Burkholderia cenocepacia J2315 6929940 YP_002234984.1 CDS BCAM2384 NC_011001.1 2684179 2684946 D putative ABC transporter system permease 2684179..2684946 Burkholderia cenocepacia J2315 6929941 YP_002234985.1 CDS arr NC_011001.1 2684979 2685374 D rifampin ADP-ribosyl transferase 2684979..2685374 Burkholderia cenocepacia J2315 6929942 YP_002234986.1 CDS BCAM2386 NC_011001.1 2685649 2686335 D putative SLT transglycosylase 2685649..2686335 Burkholderia cenocepacia J2315 6930357 YP_002234987.1 CDS folB NC_011001.1 2686436 2686876 R putative dihydroneopterin aldolase complement(2686436..2686876) Burkholderia cenocepacia J2315 6929943 YP_002234988.1 CDS soxG NC_011001.1 2686873 2687505 R putative sarcosine oxidase subunit gamma complement(2686873..2687505) Burkholderia cenocepacia J2315 6930460 YP_002234989.1 CDS soxA NC_011001.1 2687495 2690506 R putative sarcosine oxidase subunit alpha complement(2687495..2690506) Burkholderia cenocepacia J2315 6930642 YP_002234990.1 CDS soxD NC_011001.1 2690503 2690814 R putative sarcosine oxidase subunit delta complement(2690503..2690814) Burkholderia cenocepacia J2315 6930639 YP_002234991.1 CDS soxB NC_011001.1 2690839 2692083 R putative sarcosine oxidase subunit beta complement(2690839..2692083) Burkholderia cenocepacia J2315 6930641 YP_002234992.1 CDS sdaB NC_011001.1 2692098 2693570 R putative L-serine dehydratase complement(2692098..2693570) Burkholderia cenocepacia J2315 6930640 YP_002234993.1 CDS BCAM2393 NC_011001.1 2693769 2694842 D AraC family regulatory protein 2693769..2694842 Burkholderia cenocepacia J2315 6930630 YP_002234994.1 CDS BCAM2394 NC_011001.1 2695034 2695738 D GntR family regulatory protein 2695034..2695738 Burkholderia cenocepacia J2315 6929944 YP_002234995.1 CDS BCAM2395 NC_011001.1 2695808 2696698 D putative dehydrogenase/oxidoreductase 2695808..2696698 Burkholderia cenocepacia J2315 6929945 YP_002234996.1 CDS BCAM2396 NC_011001.1 2696718 2698019 D hypothetical protein 2696718..2698019 Burkholderia cenocepacia J2315 6929946 YP_002234997.1 CDS BCAM2397 NC_011001.1 2698016 2698654 D putative aldolase 2698016..2698654 Burkholderia cenocepacia J2315 6929947 YP_002234998.1 CDS BCAM2398 NC_011001.1 2698777 2700102 D major facilitator superfamily protein 2698777..2700102 Burkholderia cenocepacia J2315 6929948 YP_002234999.1 CDS hyi NC_011001.1 2700178 2700954 D putative hydroxypyruvate isomerase 2700178..2700954 Burkholderia cenocepacia J2315 6929949 YP_002235000.1 CDS BCAM2400 NC_011001.1 2700983 2701954 D NAD dependent epimerase/dehydratase family protein 2700983..2701954 Burkholderia cenocepacia J2315 6930512 YP_002235001.1 CDS BCAM2400a NC_011001.1 2702212 2702490 R Similar, but truncated at the N-terminus, to burkholderia cenocepacia au 1054. hypothetical protein precursor. UniProt:Q45DF0 (EMBL:AAHI01000001 (130 aa) fasta scores: E()=7.1e-27, 90.217% id in 92 aa, and similar, but truncated at the N-terminus, to ) burkholderia cenocepacia hi2424. hypothetical protein precursor. UniProt:Q4LWU7 (EMBL:AAHL01000008 (130 aa) fasta scores: E()=7.1e-27, 90.217% id in 92 aa, and similar to the entire protein of /ncib 9086/r18194)). hypothetical protein. UniProt:Q39AC9 (EMBL:CP000152 (92 aa) fasta scores: E()=1.2e-24, 82.609% id in 92 aa; hypothetical protein complement(2702212..2702490) Burkholderia cenocepacia J2315 6929950 YP_002235002.1 CDS BCAM2400b NC_011001.1 2702559 2702918 R hypothetical protein complement(2702559..2702918) Burkholderia cenocepacia J2315 6929951 YP_002235003.1 CDS BCAM2401 NC_011001.1 2703049 2703798 D putative aspartyl/asparaginyl beta-hydroxylase 2703049..2703798 Burkholderia cenocepacia J2315 6929952 YP_002235004.1 CDS BCAM2402 NC_011001.1 2703876 2704169 D Possible alternative translational start sites; hypothetical protein 2703876..2704169 Burkholderia cenocepacia J2315 6929953 YP_002235005.1 CDS BCAM2403 NC_011001.1 2704243 2705391 D hypothetical protein 2704243..2705391 Burkholderia cenocepacia J2315 6929954 YP_002235006.1 CDS BCAM2404 NC_011001.1 2705378 2706322 R LysR family regulatory protein complement(2705378..2706322) Burkholderia cenocepacia J2315 6929955 YP_002235007.1 CDS BCAM2405 NC_011001.1 2706460 2706885 D hypothetical protein 2706460..2706885 Burkholderia cenocepacia J2315 6929956 YP_002235008.1 CDS BCAM2406 NC_011001.1 2706895 2707617 R hypothetical protein complement(2706895..2707617) Burkholderia cenocepacia J2315 6929957 YP_002235009.1 CDS BCAM2407 NC_011001.1 2707815 2708762 R putative glycine betaine/L-proline ABC transporter substrate-binding protein complement(2707815..2708762) Burkholderia cenocepacia J2315 6929958 YP_002235010.1 CDS BCAM2408 NC_011001.1 2708865 2709863 R Similar, but truncated at the N-terminus, to burkholderia cenocepacia hi2424. helix-turn-helix, arac type:thij/pfpi. UniProt:Q4LWT8 (EMBL:AAHL01000008 (355 aa) fasta scores: E()=8.7e-125, 99.398% id in 332 aa, and similar to entire protein of burkholderia cenocepacia au 1054. helix-turn-helix, arac type:thij/pfpi precursor. UniProt:Q45DF9 (EMBL:AAHI01000001 (332 aa) fasta scores: E()=1.4e-124, 99.096% id in 332 aa; AraC family regulatory protein complement(2708865..2709863) Burkholderia cenocepacia J2315 6929959 YP_002235011.1 CDS BCAM2409 NC_011001.1 2709971 2710867 R putative glycine-betaine ABC transporter permease complement(2709971..2710867) Burkholderia cenocepacia J2315 6929960 YP_002235012.1 CDS BCAM2410 NC_011001.1 2710860 2712029 R putative glycine betaine/L-proline ABC transporter ATP-binding protein complement(2710860..2712029) Burkholderia cenocepacia J2315 6929961 YP_002235013.1 CDS BCAM2411 NC_011001.1 2712635 2716012 D hypothetical protein 2712635..2716012 Burkholderia cenocepacia J2315 6929962 YP_002235014.1 CDS BCAM2412 NC_011001.1 2716009 2717367 D hypothetical protein 2716009..2717367 Burkholderia cenocepacia J2315 6929963 YP_002235015.1 CDS BCAM2413 NC_011001.1 2717534 2718322 R putative GNAT family N-acetyltransferase complement(2717534..2718322) Burkholderia cenocepacia J2315 6929964 YP_002235016.1 CDS BCAM2414 NC_011001.1 2718619 2718924 D hypothetical protein 2718619..2718924 Burkholderia cenocepacia J2315 6929965 YP_002235017.1 CDS BCAM2415 NC_011001.1 2719235 2719885 D putative NADPH-dependent FMN reductase 2719235..2719885 Burkholderia cenocepacia J2315 6929966 YP_002235018.1 CDS BCAM2416 NC_011001.1 2720121 2720339 D hypothetical protein 2720121..2720339 Burkholderia cenocepacia J2315 6929967 YP_002235019.1 CDS BCAM2417 NC_011001.1 2720435 2721337 D hypothetical protein 2720435..2721337 Burkholderia cenocepacia J2315 6929968 YP_002235020.1 CDS BCAM2418 NC_011001.1 2722300 2730627 D This CDS is highly repetitive and contains a C-terminal YadA domain, althought the hit is before the PFam gathering threshold.; putative haemagglutinin-related autotransporter protein 2722300..2730627 Burkholderia cenocepacia J2315 6929969 YP_002235021.1 CDS BCAM2419 NC_011001.1 2730749 2731411 D putative outer membrane protein A precursor 2730749..2731411 Burkholderia cenocepacia J2315 6929970 YP_002235022.1 CDS BCAM2420 NC_011001.1 2731801 2732946 D hypothetical protein 2731801..2732946 Burkholderia cenocepacia J2315 6929971 YP_002235023.1 CDS BCAM2421 NC_011001.1 2732961 2734115 D hypothetical protein 2732961..2734115 Burkholderia cenocepacia J2315 6929972 YP_002235024.1 CDS BCAM2422 NC_011001.1 2734142 2734609 D hypothetical protein 2734142..2734609 Burkholderia cenocepacia J2315 6929973 YP_002235025.1 CDS BCAM2423 NC_011001.1 2734643 2735779 D hypothetical protein 2734643..2735779 Burkholderia cenocepacia J2315 6929974 YP_002235026.1 CDS BCAM2424 NC_011001.1 2735804 2737777 D hypothetical protein 2735804..2737777 Burkholderia cenocepacia J2315 6929975 YP_002235027.1 CDS BCAM2425 NC_011001.1 2737836 2738294 R hypothetical protein complement(2737836..2738294) Burkholderia cenocepacia J2315 6929976 YP_002235028.1 CDS BCAM2426 NC_011001.1 2738326 2739129 R putative diguanylate phosphodiesterase complement(2738326..2739129) Burkholderia cenocepacia J2315 6929977 YP_002235029.1 CDS BCAM2427 NC_011001.1 2739911 2741053 R hypothetical protein complement(2739911..2741053) Burkholderia cenocepacia J2315 6929978 YP_002235030.1 CDS BCAM2428 NC_011001.1 2741424 2742776 D hypothetical protein 2741424..2742776 Burkholderia cenocepacia J2315 6929979 YP_002235031.1 CDS BCAM2429 NC_011001.1 2742864 2744978 R putative phospholipase C complement(2742864..2744978) Burkholderia cenocepacia J2315 6929980 YP_002235032.1 CDS BCAM2429a NC_011001.1 2745021 2745224 R putative lipoprotein complement(2745021..2745224) Burkholderia cenocepacia J2315 6929981 YP_002235033.1 CDS BCAM2430 NC_011001.1 2745556 2747550 R putative biotin carboxylase complement(2745556..2747550) Burkholderia cenocepacia J2315 6929982 YP_002235034.1 CDS BCAM2431 NC_011001.1 2747587 2748372 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(2747587..2748372) Burkholderia cenocepacia J2315 6929983 YP_002235035.1 CDS BCAM2432 NC_011001.1 2748392 2749999 R putative biotin-dependent carboxyl transferase complement(2748392..2749999) Burkholderia cenocepacia J2315 6929984 YP_002235036.1 CDS BCAM2433 NC_011001.1 2750031 2751212 R putative acyl-CoA dehydrogenase complement(2750031..2751212) Burkholderia cenocepacia J2315 6929985 YP_002235037.1 CDS BCAM2434 NC_011001.1 2751479 2752129 D TetR family regulatory protein 2751479..2752129 Burkholderia cenocepacia J2315 6929986 YP_002235038.1 CDS BCAM2435 NC_011001.1 2752202 2752690 R MarR family regulatory protein complement(2752202..2752690) Burkholderia cenocepacia J2315 6929987 YP_002235039.1 CDS vanA NC_011001.1 2752892 2753971 D vanillate O-demethylase oxygenase subunit 2752892..2753971 Burkholderia cenocepacia J2315 6929988 YP_002235040.1 CDS vanB NC_011001.1 2753968 2754933 D vanillate O-demethylase oxidoreductase 2753968..2754933 Burkholderia cenocepacia J2315 6930660 YP_002235041.1 CDS BCAM2438 NC_011001.1 2755108 2755554 R putative lipoprotein complement(2755108..2755554) Burkholderia cenocepacia J2315 6930661 YP_002235042.1 CDS BCAM2439 NC_011001.1 2755955 2758123 D TonB-dependent receptor 2755955..2758123 Burkholderia cenocepacia J2315 6929989 YP_002235043.1 CDS BCAM2440 NC_011001.1 2758367 2759158 D hypothetical protein 2758367..2759158 Burkholderia cenocepacia J2315 6929990 YP_002235044.1 CDS BCAM2441 NC_011001.1 2759167 2760234 D putative solute-binding protein precursor 2759167..2760234 Burkholderia cenocepacia J2315 6929991 YP_002235045.1 CDS BCAM2442 NC_011001.1 2760288 2760986 D putative cytochrome c 2760288..2760986 Burkholderia cenocepacia J2315 6929992 YP_002235046.1 CDS BCAM2443 NC_011001.1 2760983 2761921 D putative cytochrome c 2760983..2761921 Burkholderia cenocepacia J2315 6929993 YP_002235047.1 CDS BCAM2444 NC_011001.1 2761966 2763927 R hypothetical protein complement(2761966..2763927) Burkholderia cenocepacia J2315 6929994 YP_002235048.1 CDS BCAM2445 NC_011001.1 2764340 2764771 R hypothetical protein complement(2764340..2764771) Burkholderia cenocepacia J2315 6929995 YP_002235049.1 CDS BCAM2446 NC_011001.1 2764869 2766062 R putative gram-negative porin complement(2764869..2766062) Burkholderia cenocepacia J2315 6929996 YP_002235050.1 CDS BCAM2447 NC_011001.1 2766368 2767000 D putative LysE family transporter 2766368..2767000 Burkholderia cenocepacia J2315 6929997 YP_002235051.1 CDS BCAM2448 NC_011001.1 2767013 2767549 D putative GNAT family N-acetyltransferase 2767013..2767549 Burkholderia cenocepacia J2315 6929998 YP_002235052.1 CDS BCAM2449 NC_011001.1 2767647 2768381 D putative metallophosphoesterase 2767647..2768381 Burkholderia cenocepacia J2315 6929999 YP_002235053.1 CDS BCAM2450 NC_011001.1 2768439 2769050 D family S33 serine peptidase; putative hydrolase 2768439..2769050 Burkholderia cenocepacia J2315 6930000 YP_002235054.1 CDS BCAM2451 NC_011001.1 2769114 2770436 R two-component regulatory system sensor kinase complement(2769114..2770436) Burkholderia cenocepacia J2315 6930001 YP_002235055.1 CDS BCAM2452 NC_011001.1 2770433 2771173 R two-component regulatory system response regulator protein complement(2770433..2771173) Burkholderia cenocepacia J2315 6930002 YP_002235056.1 CDS BCAM2453 NC_011001.1 2771407 2771988 D putative redoxin protein 2771407..2771988 Burkholderia cenocepacia J2315 6930003 YP_002235057.1 CDS BCAM2454 NC_011001.1 2772039 2772677 R putative FMN-binding protein complement(2772039..2772677) Burkholderia cenocepacia J2315 6930004 YP_002235058.1 CDS BCAM2455 NC_011001.1 2772802 2774310 D GntR family regulatory protein 2772802..2774310 Burkholderia cenocepacia J2315 6930005 YP_002235059.1 CDS BCAM2456 NC_011001.1 2774447 2776666 D glycosyltransferase 2774447..2776666 Burkholderia cenocepacia J2315 6930006 YP_002235060.1 CDS BCAM2457 NC_011001.1 2776832 2777278 R hypothetical protein complement(2776832..2777278) Burkholderia cenocepacia J2315 6930007 YP_002235061.1 CDS BCAM2458 NC_011001.1 2777403 2778503 R putative adenosine deaminase complement(2777403..2778503) Burkholderia cenocepacia J2315 6930008 YP_002235062.1 CDS BCAM2459 NC_011001.1 2778548 2779897 R putative transmembrane permease complement(2778548..2779897) Burkholderia cenocepacia J2315 6930009 YP_002235063.1 CDS BCAM2460 NC_011001.1 2779923 2780900 D LysR family regulatory protein 2779923..2780900 Burkholderia cenocepacia J2315 6930010 YP_002235064.1 CDS BCAM2461 NC_011001.1 2780940 2781992 R putative inosine-uridine preferring nucleoside hydrolase complement(2780940..2781992) Burkholderia cenocepacia J2315 6930011 YP_002235065.1 CDS BCAM2462 NC_011001.1 2782002 2783114 R putative gram-negative porin complement(2782002..2783114) Burkholderia cenocepacia J2315 6930012 YP_002235066.1 CDS BCAM2463 NC_011001.1 2783276 2784583 R Possible alternative translational start sites; hypothetical protein complement(2783276..2784583) Burkholderia cenocepacia J2315 6930013 YP_002235067.1 CDS BCAM2464 NC_011001.1 2784979 2786397 R major facilitator superfamily protein complement(2784979..2786397) Burkholderia cenocepacia J2315 6930014 YP_002235068.1 CDS BCAM2465 NC_011001.1 2786822 2789308 D putative transport membrane protein 2786822..2789308 Burkholderia cenocepacia J2315 6930015 YP_002235069.1 CDS BCAM2466 NC_011001.1 2789452 2790819 R putative reverse transcriptase-Group II intron complement(2789452..2790819) Burkholderia cenocepacia J2315 6930016 YP_002235070.1 CDS BCAM2467 NC_011001.1 2790990 2792024 D putative transposase 2790990..2792024 Burkholderia cenocepacia J2315 6930017 YP_002235071.1 CDS BCAM2468 NC_011001.1 2792714 2794225 R putative aldehyde dehydrogenase family protein complement(2792714..2794225) Burkholderia cenocepacia J2315 6930018 YP_002235072.1 CDS BCAM2469 NC_011001.1 2794859 2796439 D putative amino-acid permease 2794859..2796439 Burkholderia cenocepacia J2315 6930019 YP_002235073.1 CDS BCAM2470 NC_011001.1 2796575 2797843 D putative FAD-binding oxidoreductase 2796575..2797843 Burkholderia cenocepacia J2315 6930020 YP_002235074.1 CDS BCAM2471 NC_011001.1 2797970 2798644 D TetR family regulatory protein 2797970..2798644 Burkholderia cenocepacia J2315 6930021 YP_002235075.1 CDS BCAM2472 NC_011001.1 2798711 2800501 R putative phospholipase D complement(2798711..2800501) Burkholderia cenocepacia J2315 6930022 YP_002235076.1 CDS BCAM2473 NC_011001.1 2800607 2801365 R DeoR family regulatory protein complement(2800607..2801365) Burkholderia cenocepacia J2315 6930023 YP_002235077.1 CDS BCAM2474 NC_011001.1 2801568 2801753 D hypothetical protein 2801568..2801753 Burkholderia cenocepacia J2315 6930024 YP_002235078.1 CDS BCAM2475 NC_011001.1 2801954 2802823 D hypothetical protein 2801954..2802823 Burkholderia cenocepacia J2315 6930025 YP_002235079.1 CDS nadE NC_011001.1 2803015 2803863 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2803015..2803863 Burkholderia cenocepacia J2315 6930026 YP_002235080.1 CDS BCAM2477 NC_011001.1 2803938 2805614 R family S10 serine peptidase complement(2803938..2805614) Burkholderia cenocepacia J2315 6930560 YP_002235081.1 CDS BCAM2478 NC_011001.1 2805688 2807277 R family S53 serine peptidase; serine-carboxyl peptidase complement(2805688..2807277) Burkholderia cenocepacia J2315 6930027 YP_002235082.1 CDS BCAM2479 NC_011001.1 2807551 2808171 R putative transporter-LysE family complement(2807551..2808171) Burkholderia cenocepacia J2315 6930028 YP_002235083.1 CDS BCAM2480 NC_011001.1 2808306 2808770 D AnsC family regulatory protein 2808306..2808770 Burkholderia cenocepacia J2315 6930029 YP_002235084.1 CDS BCAM2481 NC_011001.1 2808835 2809746 R LysR family regulatory protein complement(2808835..2809746) Burkholderia cenocepacia J2315 6930030 YP_002235085.1 CDS speB NC_011001.1 2809851 2810843 D agmatinase 2809851..2810843 Burkholderia cenocepacia J2315 6930031 YP_002235086.1 CDS BCAM2483 NC_011001.1 2810899 2812224 D major facilitator superfamily protein 2810899..2812224 Burkholderia cenocepacia J2315 6930643 YP_002235087.1 CDS metE NC_011001.1 2812341 2814635 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(2812341..2814635) Burkholderia cenocepacia J2315 6930032 YP_002235088.1 CDS metR NC_011001.1 2814763 2815671 D two-component regulatory system sensor kinase 2814763..2815671 Burkholderia cenocepacia J2315 6930542 YP_002235089.1 CDS BCAM2486 NC_011001.1 2815694 2816422 R hypothetical protein complement(2815694..2816422) Burkholderia cenocepacia J2315 6930543 YP_002235090.1 CDS BCAM2487 NC_011001.1 2816436 2816645 R hypothetical protein complement(2816436..2816645) Burkholderia cenocepacia J2315 6930033 YP_002235091.1 CDS BCAM2488 NC_011001.1 2816868 2817458 D putative phosphoglycerate/bisphosphoglycerate mutase 2816868..2817458 Burkholderia cenocepacia J2315 6930034 YP_002235092.1 CDS BCAM2489 NC_011001.1 2817624 2819216 D putative transmembrane phosphate transporter protein 2817624..2819216 Burkholderia cenocepacia J2315 6930035 YP_002235093.1 CDS BCAM2490 NC_011001.1 2819494 2820255 D hypothetical protein 2819494..2820255 Burkholderia cenocepacia J2315 6930036 YP_002235094.1 CDS BCAM2491 NC_011001.1 2820519 2821943 R major facilitator superfamily protein complement(2820519..2821943) Burkholderia cenocepacia J2315 6930037 YP_002235095.1 CDS BCAM2492 NC_011001.1 2828209 2828763 R hypothetical protein complement(2828209..2828763) Burkholderia cenocepacia J2315 6930369 YP_002235096.1 CDS BCAM2493 NC_011001.1 2828768 2830219 R Similar to BCAM1186, 68.153% identity (68.153% ungapped) in 471 aa overlap (12-482:14-484), and BCAL0451, 68.153% identity (68.153% ungapped) in 471 aa overlap (12-482:14-484); putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase complement(2828768..2830219) Burkholderia cenocepacia J2315 6930039 YP_002235097.1 CDS phnA NC_011001.1 2830219 2831529 R putative phosphonoacetate hydrolase complement(2830219..2831529) Burkholderia cenocepacia J2315 6930040 YP_002235098.1 CDS BCAM2495 NC_011001.1 2831526 2832386 R binding-protein-dependent transport system protein complement(2831526..2832386) Burkholderia cenocepacia J2315 6930601 YP_002235099.1 CDS BCAM2496 NC_011001.1 2832376 2833254 R binding-protein-dependent transport system protein complement(2832376..2833254) Burkholderia cenocepacia J2315 6930041 YP_002235100.1 CDS BCAM2497 NC_011001.1 2833274 2834377 R ABC transporter ATP-binding protein complement(2833274..2834377) Burkholderia cenocepacia J2315 6930042 YP_002235101.1 CDS BCAM2498 NC_011001.1 2834412 2835503 R extracellular solute-binding protein complement(2834412..2835503) Burkholderia cenocepacia J2315 6930043 YP_002235102.1 CDS BCAM2499 NC_011001.1 2835765 2836874 D catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate; 2-aminoethylphosphonate--pyruvate transaminase 2835765..2836874 Burkholderia cenocepacia J2315 6930044 YP_002235103.1 CDS BCAM2500 NC_011001.1 2836972 2838315 R putative glucarate transporter complement(2836972..2838315) Burkholderia cenocepacia J2315 6930045 YP_002235104.1 CDS aroE NC_011001.1 2838354 2839208 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(2838354..2839208) Burkholderia cenocepacia J2315 6930046 YP_002235105.1 CDS aroQ NC_011001.1 2839205 2839747 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(2839205..2839747) Burkholderia cenocepacia J2315 6930353 YP_002235106.1 CDS BCAM2503 NC_011001.1 2839918 2841810 D putative amino acid dioxygenase 2839918..2841810 Burkholderia cenocepacia J2315 6930356 YP_002235107.1 CDS BCAM2504 NC_011001.1 2842098 2842361 D hypothetical protein 2842098..2842361 Burkholderia cenocepacia J2315 6930047 YP_002235108.1 CDS BCAM2505 NC_011001.1 2842440 2843234 R AraC family regulatory protein complement(2842440..2843234) Burkholderia cenocepacia J2315 6930048 YP_002235109.1 CDS BCAM2506 NC_011001.1 2843815 2844993 D putative extracellular ligand-binding receptor 2843815..2844993 Burkholderia cenocepacia J2315 6930049 YP_002235110.1 CDS BCAM2507 NC_011001.1 2845306 2846616 D major facilitator superfamily protein 2845306..2846616 Burkholderia cenocepacia J2315 6930050 YP_002235111.1 CDS BCAM2508 NC_011001.1 2846730 2847167 R hypothetical protein complement(2846730..2847167) Burkholderia cenocepacia J2315 6930051 YP_002235112.1 CDS BCAM2509 NC_011001.1 2847331 2847786 R putative FucU/RbsD family transport protein complement(2847331..2847786) Burkholderia cenocepacia J2315 6930052 YP_002235113.1 CDS BCAM2510 NC_011001.1 2847866 2848258 R hypothetical protein complement(2847866..2848258) Burkholderia cenocepacia J2315 6930053 YP_002235114.1 CDS garD NC_011001.1 2848441 2850003 R putative D-galactarate dehydratase complement(2848441..2850003) Burkholderia cenocepacia J2315 6930054 YP_002235115.1 CDS BCAM2512 NC_011001.1 2850215 2851129 D catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase 2850215..2851129 Burkholderia cenocepacia J2315 6930466 YP_002235116.1 CDS BCAM2513 NC_011001.1 2851217 2851771 R hypothetical protein complement(2851217..2851771) Burkholderia cenocepacia J2315 6930055 YP_002235117.1 CDS BCAM2514 NC_011001.1 2851964 2853541 R putative fatty aldehyde dehydrogenase complement(2851964..2853541) Burkholderia cenocepacia J2315 6930056 YP_002235118.1 CDS BCAM2515 NC_011001.1 2853789 2855165 D putative glucarate transporter 2853789..2855165 Burkholderia cenocepacia J2315 6930057 YP_002235119.1 CDS BCAM2516 NC_011001.1 2855232 2855957 R subfamily M50B metallo peptidase; subfamily M50B metallopeptidase complement(2855232..2855957) Burkholderia cenocepacia J2315 6930058 YP_002235120.1 CDS BCAM2517 NC_011001.1 2855954 2856907 R hypothetical protein complement(2855954..2856907) Burkholderia cenocepacia J2315 6930059 YP_002235121.1 CDS BCAM2518 NC_011001.1 2857104 2857952 D putative HTH domain-containing protein 2857104..2857952 Burkholderia cenocepacia J2315 6930060 YP_002235122.1 CDS BCAM2519 NC_011001.1 2857983 2858609 R putative LysE family transporter complement(2857983..2858609) Burkholderia cenocepacia J2315 6930061 YP_002235123.1 CDS BCAM2520 NC_011001.1 2858778 2859242 D AsnC family regulatory protein 2858778..2859242 Burkholderia cenocepacia J2315 6930062 YP_002235124.1 CDS pyrC NC_011001.1 2859239 2860609 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(2859239..2860609) Burkholderia cenocepacia J2315 6930063 YP_002235125.1 CDS BCAM2522 NC_011001.1 2860613 2861173 R putative hexapeptide repeat protein complement(2860613..2861173) Burkholderia cenocepacia J2315 6930625 YP_002235126.1 CDS BCAM2523 NC_011001.1 2861173 2861751 R hypothetical protein complement(2861173..2861751) Burkholderia cenocepacia J2315 6930064 YP_002235127.1 CDS BCAM2524 NC_011001.1 2861745 2862695 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase complement(2861745..2862695) Burkholderia cenocepacia J2315 6930065 YP_002235128.1 CDS BCAM2525 NC_011001.1 2862726 2863934 R putative p47K/CobW family protein complement(2862726..2863934) Burkholderia cenocepacia J2315 6930066 YP_002235129.1 CDS BCAM2526 NC_011001.1 2864101 2865312 R putative monooxygenase complement(2864101..2865312) Burkholderia cenocepacia J2315 6930067 YP_002235130.1 CDS BCAM2527 NC_011001.1 2865309 2866151 R hypothetical protein complement(2865309..2866151) Burkholderia cenocepacia J2315 6930068 YP_002235131.1 CDS BCAM2528 NC_011001.1 2866206 2866862 R putative ABC transporter permease complement(2866206..2866862) Burkholderia cenocepacia J2315 6930069 YP_002235132.1 CDS BCAM2529 NC_011001.1 2866855 2868039 R ABC transporter ATP-binding protein complement(2866855..2868039) Burkholderia cenocepacia J2315 6930070 YP_002235133.1 CDS BCAM2530 NC_011001.1 2868058 2869470 R putative monooxygenase complement(2868058..2869470) Burkholderia cenocepacia J2315 6930071 YP_002235134.1 CDS BCAM2531 NC_011001.1 2869481 2870311 R putative ABC transporter solute-binding protein complement(2869481..2870311) Burkholderia cenocepacia J2315 6930072 YP_002235135.1 CDS BCAM2532 NC_011001.1 2870709 2872118 D putative citrate/malate transporter 2870709..2872118 Burkholderia cenocepacia J2315 6930073 YP_002235136.1 CDS BCAM2533 NC_011001.1 2872239 2874152 D two-component regulatory system sensor kinase 2872239..2874152 Burkholderia cenocepacia J2315 6930074 YP_002235137.1 CDS BCAM2534 NC_011001.1 2874142 2875503 D two-component regulatory system Fis/response regulator protein 2874142..2875503 Burkholderia cenocepacia J2315 6930075 YP_002235138.1 CDS BCAM2535 NC_011001.1 2875529 2875858 D hypothetical protein 2875529..2875858 Burkholderia cenocepacia J2315 6930076 YP_002235139.1 CDS BCAM2536 NC_011001.1 2876097 2876948 D putative alpha-beta hydrolase 2876097..2876948 Burkholderia cenocepacia J2315 6930077 YP_002235140.1 CDS BCAM2537 NC_011001.1 2877060 2877500 R hypothetical protein complement(2877060..2877500) Burkholderia cenocepacia J2315 6930078 YP_002235141.1 CDS BCAM2538 NC_011001.1 2877602 2878492 D LysR family regulatory protein 2877602..2878492 Burkholderia cenocepacia J2315 6930079 YP_002235142.1 CDS BCAM2539 NC_011001.1 2878636 2879571 D AraC family regulatory protein 2878636..2879571 Burkholderia cenocepacia J2315 6930080 YP_002235143.1 CDS fedB NC_011001.1 2879534 2881054 R Similar to Burkholderia sp. nf100. fedb UniProt:Q25C65 (EMBL:AB235840 (501 aa) fasta scores: E()=1.6e-19, 36.743% id in 479 aa, and to )/ncib 9086/r18194)). hypothetical protein. UniProt:Q394I0 (EMBL:CP000152 (436 aa) fasta scores: E()=1.7e-106, 63.014% id in 438 aa; fenitrothion hydrolase FedB complement(2879534..2881054) Burkholderia cenocepacia J2315 6930081 YP_002235144.1 CDS BCAM2541 NC_011001.1 2881071 2882408 R hypothetical protein complement(2881071..2882408) Burkholderia cenocepacia J2315 6930458 YP_002235145.1 CDS fedA NC_011001.1 2882405 2884039 R Fenitrothion is an organophosphorous pesticide; fenitrothion hydrolase FedA complement(2882405..2884039) Burkholderia cenocepacia J2315 6930082 YP_002235146.1 CDS BCAM2543 NC_011001.1 2884086 2884499 R hypothetical protein complement(2884086..2884499) Burkholderia cenocepacia J2315 6930457 YP_002235147.1 CDS BCAM2544 NC_011001.1 2884793 2885761 R LysR family regulatory protein complement(2884793..2885761) Burkholderia cenocepacia J2315 6930083 YP_002235148.1 CDS BCAM2545 NC_011001.1 2885923 2887227 D major facilitator superfamily protein 2885923..2887227 Burkholderia cenocepacia J2315 6930084 YP_002235149.1 CDS BCAM2546 NC_011001.1 2887300 2888793 D putative MlrC family protein 2887300..2888793 Burkholderia cenocepacia J2315 6930085 YP_002235150.1 CDS BCAM2546a NC_011001.1 2889051 2889464 R hypothetical protein complement(2889051..2889464) Burkholderia cenocepacia J2315 6930086 YP_002235151.1 CDS BCAM2547a NC_011001.1 2889873 2890319 R glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein complement(2889873..2890319) Burkholderia cenocepacia J2315 6930087 YP_002235152.1 CDS BCAM2548 NC_011001.1 2890436 2891026 D TetR family regulatory protein 2890436..2891026 Burkholderia cenocepacia J2315 6930088 YP_002235153.1 CDS opcM NC_011001.1 2891215 2892774 R multidrug efflux system outer membrane protein OpcM complement(2891215..2892774) Burkholderia cenocepacia J2315 6930089 YP_002235154.1 CDS ceoB NC_011001.1 2892767 2895967 R multidrug efflux system transporter protein CeoB complement(2892767..2895967) Burkholderia cenocepacia J2315 6930570 YP_002235155.1 CDS ceoA NC_011001.1 2896013 2897230 R multidrug efflux system transport protein CeoA complement(2896013..2897230) Burkholderia cenocepacia J2315 6930417 YP_002235156.1 CDS llpE NC_011001.1 2897263 2898123 R putative hydrolase complement(2897263..2898123) Burkholderia cenocepacia J2315 6930416 YP_002235157.1 CDS ceoR NC_011001.1 2898298 2899302 D LysR family regulatory protein 2898298..2899302 Burkholderia cenocepacia J2315 6930529 YP_002235158.1 CDS BCAM2555 NC_011001.1 2899719 2900012 D hypothetical protein 2899719..2900012 Burkholderia cenocepacia J2315 6930418 YP_002235159.1 CDS BCAM2556 NC_011001.1 2900231 2901310 R putative purine nucleoside permease complement(2900231..2901310) Burkholderia cenocepacia J2315 6930090 YP_002235160.1 CDS BCAM2557 NC_011001.1 2901541 2902134 R putative LysE family transporter complement(2901541..2902134) Burkholderia cenocepacia J2315 6930091 YP_002235161.1 CDS selD NC_011001.1 2902216 2903280 R catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase complement(2902216..2903280) Burkholderia cenocepacia J2315 6930092 YP_002235162.1 CDS BCAM2559 NC_011001.1 2903396 2904232 D hypothetical protein 2903396..2904232 Burkholderia cenocepacia J2315 6930635 YP_002235163.1 CDS BCAM2560 NC_011001.1 2904393 2905901 R GntR family regulatory protein complement(2904393..2905901) Burkholderia cenocepacia J2315 6930093 YP_002235164.1 CDS BCAM2561 NC_011001.1 2906028 2907311 D putative 4-aminobutyrate aminotransferase 2906028..2907311 Burkholderia cenocepacia J2315 6930094 YP_002235165.1 CDS gabD NC_011001.1 2907402 2908871 D putative succinate-semialdehyde dehydrogenase 2907402..2908871 Burkholderia cenocepacia J2315 6930095 YP_002235166.1 CDS tsr NC_011001.1 2908988 2910595 R methyl-accepting chemotaxis protein complement(2908988..2910595) Burkholderia cenocepacia J2315 6930463 YP_002235167.1 CDS aer NC_011001.1 2910944 2912488 R putative aerotaxis receptor complement(2910944..2912488) Burkholderia cenocepacia J2315 6930655 YP_002235168.1 CDS BCAM2565 NC_011001.1 2912800 2913657 D putative methyltransferase 2912800..2913657 Burkholderia cenocepacia J2315 6930337 YP_002235169.1 CDS BCAM2566 NC_011001.1 2913654 2914214 D putative GCN5-related N-acetyltransferase 2913654..2914214 Burkholderia cenocepacia J2315 6930096 YP_002235170.1 CDS BCAM2567 NC_011001.1 2914289 2914816 D hypothetical protein 2914289..2914816 Burkholderia cenocepacia J2315 6930097 YP_002235171.1 CDS BCAM2568 NC_011001.1 2914928 2916130 R catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase complement(2914928..2916130) Burkholderia cenocepacia J2315 6930098 YP_002235172.1 CDS BCAM2569 NC_011001.1 2916319 2917146 D IclR family regulatory protein 2916319..2917146 Burkholderia cenocepacia J2315 6930099 YP_002235173.1 CDS BCAM2570 NC_011001.1 2917358 2918473 R putative succinylglutamate desuccinylase/aspartoacylase complement(2917358..2918473) Burkholderia cenocepacia J2315 6930100 YP_002235174.1 CDS BCAM2571 NC_011001.1 2918529 2919302 R periplasmic solute-binding protein complement(2918529..2919302) Burkholderia cenocepacia J2315 6930101 YP_002235175.1 CDS BCAM2572 NC_011001.1 2919439 2920359 D LysR family regulatory protein 2919439..2920359 Burkholderia cenocepacia J2315 6930102 YP_002235176.1 CDS BCAM2573 NC_011001.1 2920401 2921732 R major facilitator superfamily protein complement(2920401..2921732) Burkholderia cenocepacia J2315 6930103 YP_002235177.1 CDS BCAM2574 NC_011001.1 2921789 2922979 R subfamily M20D metallo peptidase; subfamily M20D metallopeptidase complement(2921789..2922979) Burkholderia cenocepacia J2315 6930104 YP_002235178.1 CDS BCAM2575 NC_011001.1 2923219 2924127 R LysR family regulatory protein complement(2923219..2924127) Burkholderia cenocepacia J2315 6930105 YP_002235179.1 CDS BCAM2576 NC_011001.1 2924249 2924962 D putative ThiJ/PfpI family protein 2924249..2924962 Burkholderia cenocepacia J2315 6930106 YP_002235180.1 CDS BCAM2577 NC_011001.1 2924984 2925826 D putative ThiJ/PfpI family protein 2924984..2925826 Burkholderia cenocepacia J2315 6930107 YP_002235181.1 CDS BCAM2578 NC_011001.1 2925888 2926682 D putative short chain dehydrogenase 2925888..2926682 Burkholderia cenocepacia J2315 6930108 YP_002235182.1 CDS BCAM2579 NC_011001.1 2926874 2927806 R putative amidohydrolase complement(2926874..2927806) Burkholderia cenocepacia J2315 6930109 YP_002235183.1 CDS BCAM2580 NC_011001.1 2927809 2929131 R putative tartrate transporter complement(2927809..2929131) Burkholderia cenocepacia J2315 6930110 YP_002235184.1 CDS BCAM2581 NC_011001.1 2929143 2930375 R major facilitator superfamily protein complement(2929143..2930375) Burkholderia cenocepacia J2315 6930111 YP_002235185.1 CDS BCAM2582 NC_011001.1 2930378 2931658 R major facilitator superfamily protein complement(2930378..2931658) Burkholderia cenocepacia J2315 6930112 YP_002235186.1 CDS BCAM2583 NC_011001.1 2931655 2932701 R putative amidohydrolase complement(2931655..2932701) Burkholderia cenocepacia J2315 6930113 YP_002235187.1 CDS BCAM2584 NC_011001.1 2932712 2933863 R putative gram-negative porin complement(2932712..2933863) Burkholderia cenocepacia J2315 6930114 YP_002235188.1 CDS BCAM2585 NC_011001.1 2933913 2935292 R putative tartrate transporter complement(2933913..2935292) Burkholderia cenocepacia J2315 6930115 YP_002235189.1 CDS BCAM2586 NC_011001.1 2935379 2936320 R putative lactonase complement(2935379..2936320) Burkholderia cenocepacia J2315 6930116 YP_002235190.1 CDS serA NC_011001.1 2936342 2937289 R putative D-3-phosphoglycerate dehydrogenase complement(2936342..2937289) Burkholderia cenocepacia J2315 6930117 YP_002235191.1 CDS BCAM2588 NC_011001.1 2937289 2937987 R putative methyltransferase/aldolase complement(2937289..2937987) Burkholderia cenocepacia J2315 6930636 YP_002235192.1 CDS BCAM2589 NC_011001.1 2938153 2938863 D IclR family regulatory protein 2938153..2938863 Burkholderia cenocepacia J2315 6930118 YP_002235193.1 CDS BCAM2590 NC_011001.1 2939098 2940432 R major facilitator superfamily protein complement(2939098..2940432) Burkholderia cenocepacia J2315 6930119 YP_002235194.1 CDS BCAM2591 NC_011001.1 2940499 2942844 R putative cytochrome P450 iron-sulfur protein complement(2940499..2942844) Burkholderia cenocepacia J2315 6930120 YP_002235195.1 CDS BCAM2592 NC_011001.1 2942958 2943773 D IclR family regulatory protein 2942958..2943773 Burkholderia cenocepacia J2315 6930121 YP_002235196.1 CDS BCAM2593 NC_011001.1 2943863 2944501 D TetR family regulatory protein 2943863..2944501 Burkholderia cenocepacia J2315 6930122 YP_002235197.1 CDS BCAM2594 NC_011001.1 2944547 2945530 D putative alcohol dehydrogenase 2944547..2945530 Burkholderia cenocepacia J2315 6930123 YP_002235198.1 CDS BCAM2595 NC_011001.1 2945564 2946142 D putative carboxymuconolactone dehydrogenase family protein 2945564..2946142 Burkholderia cenocepacia J2315 6930124 YP_002235199.1 CDS BCAM2596 NC_011001.1 2946261 2947604 R family S12 serine peptidase; beta-lactamase family protein complement(2946261..2947604) Burkholderia cenocepacia J2315 6930125 YP_002235200.1 CDS BCAM2597 NC_011001.1 2947841 2948752 D LysR family regulatory protein 2947841..2948752 Burkholderia cenocepacia J2315 6930126 YP_002235201.1 CDS BCAM2598 NC_011001.1 2948781 2949656 R putative short-chain dehydrogenase complement(2948781..2949656) Burkholderia cenocepacia J2315 6930127 YP_002235202.1 CDS BCAM2599 NC_011001.1 2949810 2950388 R TetR family regulatory protein complement(2949810..2950388) Burkholderia cenocepacia J2315 6930128 YP_002235203.1 CDS zwf NC_011001.1 2950591 2952066 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2950591..2952066 Burkholderia cenocepacia J2315 6930129 YP_002235204.1 CDS BCAM2601 NC_011001.1 2952136 2953077 R LysR family regulatory protein complement(2952136..2953077) Burkholderia cenocepacia J2315 6930668 YP_002235205.1 CDS BCAM2602 NC_011001.1 2953179 2954381 D major facilitator superfamily protein 2953179..2954381 Burkholderia cenocepacia J2315 6930130 YP_002235206.1 CDS BCAM2603 NC_011001.1 2954411 2954734 D hypothetical protein 2954411..2954734 Burkholderia cenocepacia J2315 6930131 YP_002235207.1 CDS BCAM2604 NC_011001.1 2954751 2955701 D putative monooxygenase 2954751..2955701 Burkholderia cenocepacia J2315 6930132 YP_002235208.1 CDS dkgB NC_011001.1 2955850 2956659 D catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; 2,5-diketo-D-gluconate reductase B 2955850..2956659 Burkholderia cenocepacia J2315 6930133 YP_002235209.1 CDS BCAM2606 NC_011001.1 2956676 2957641 R putative transposase complement(2956676..2957641) Burkholderia cenocepacia J2315 6930441 YP_002235210.1 CDS BCAM2607 NC_011001.1 2957909 2959024 D putative NADH:flavin oxidoreductase/NADH oxidase 2957909..2959024 Burkholderia cenocepacia J2315 6930134 YP_002235211.1 CDS BCAM2608 NC_011001.1 2959044 2960006 D hypothetical protein 2959044..2960006 Burkholderia cenocepacia J2315 6930135 YP_002235212.1 CDS BCAM2609 NC_011001.1 2960143 2960661 D hypothetical protein 2960143..2960661 Burkholderia cenocepacia J2315 6930136 YP_002235213.1 CDS BCAM2610 NC_011001.1 2960784 2961449 R putative methyltransferase complement(2960784..2961449) Burkholderia cenocepacia J2315 6930137 YP_002235214.1 CDS BCAM2611 NC_011001.1 2961498 2962175 D TetR family regulatory protein 2961498..2962175 Burkholderia cenocepacia J2315 6930138 YP_002235215.1 CDS BCAM2612 NC_011001.1 2962706 2964094 D permease 2962706..2964094 Burkholderia cenocepacia J2315 6930139 YP_002235216.1 CDS BCAM2613 NC_011001.1 2964308 2964901 D hypothetical protein 2964308..2964901 Burkholderia cenocepacia J2315 6930140 YP_002235217.1 CDS BCAM2614 NC_011001.1 2964911 2965312 R similar to the C-terminus of Q45CY5_9BURK and similar to entire protein of Q39B13_BURS3; hypothetical protein complement(2964911..2965312) Burkholderia cenocepacia J2315 6930141 YP_002235218.1 CDS BCAM2615 NC_011001.1 2965309 2965617 R Similar, but truncated at the N-terminus, to ) burkholderia cenocepacia hi2424. hypothetical protein. UniProt:Q4LQD0 (EMBL:AAHL01000028 (121 aa) fasta scores: E()=1.4e-34, 96.078% id in 102 aa, and similar to entire protein of )/ncib 9086/r18194)). hypothetical protein. UniProt:Q39B14 (EMBL:CP000152 (102 aa) fasta scores: E()=3.9e-33, 91.176% id in 102 aa; hypothetical protein complement(2965309..2965617) Burkholderia cenocepacia J2315 6930142 YP_002235219.1 CDS BCAM2616 NC_011001.1 2965724 2966671 D AraC family regulatory protein 2965724..2966671 Burkholderia cenocepacia J2315 6930143 YP_002235220.1 CDS BCAM2617 NC_011001.1 2966738 2967658 D LysR family regulatory protein 2966738..2967658 Burkholderia cenocepacia J2315 6930144 YP_002235221.1 CDS argT NC_011001.1 2967885 2968667 D putative periplasmic lysine-arginine-ornithine-binding protein 2967885..2968667 Burkholderia cenocepacia J2315 6930145 YP_002235222.1 CDS BCAM2619 NC_011001.1 2968894 2970009 D succinylglutamate desuccinylase/aspartoacylase family protein 2968894..2970009 Burkholderia cenocepacia J2315 6930352 YP_002235223.1 CDS BCAM2620 NC_011001.1 2970164 2970970 R putative lipoprotein complement(2970164..2970970) Burkholderia cenocepacia J2315 6930146 YP_002235224.1 CDS BCAM2623 NC_011001.1 2972931 2973194 D hypothetical protein 2972931..2973194 Burkholderia cenocepacia J2315 6930148 YP_002235225.1 CDS BCAM2624 NC_011001.1 2973319 2973702 D hypothetical protein 2973319..2973702 Burkholderia cenocepacia J2315 6930149 YP_002235226.1 CDS BCAM2625 NC_011001.1 2973890 2974117 D hypothetical protein 2973890..2974117 Burkholderia cenocepacia J2315 6930150 YP_002235227.1 CDS huvA NC_011001.1 2974342 2976615 D putative heme receptor protein 2974342..2976615 Burkholderia cenocepacia J2315 6930151 YP_002235228.1 CDS hmuS NC_011001.1 2976665 2977756 D putative hemin ABC transporter protein 2976665..2977756 Burkholderia cenocepacia J2315 6930511 YP_002235229.1 CDS hmuT NC_011001.1 2977753 2978670 D putative hemin transport system, substrate-binding protein 2977753..2978670 Burkholderia cenocepacia J2315 6930498 YP_002235230.1 CDS hmuU NC_011001.1 2978686 2979774 D putative hemin ABC transporter membrane protein 2978686..2979774 Burkholderia cenocepacia J2315 6930499 YP_002235231.1 CDS hmuV NC_011001.1 2979794 2980615 D with HmuTU is involved in the import of hemin; hemin importer ATP-binding subunit 2979794..2980615 Burkholderia cenocepacia J2315 6930500 YP_002235232.1 CDS BCAM2631 NC_011001.1 2980668 2981279 R hypothetical protein complement(2980668..2981279) Burkholderia cenocepacia J2315 6930501 YP_002235233.1 CDS BCAM2632 NC_011001.1 2981288 2983417 R putative penicillin-binding protein complement(2981288..2983417) Burkholderia cenocepacia J2315 6930152 YP_002235234.1 CDS BCAM2633 NC_011001.1 2983659 2984456 D streptomycin 3''-kinase 2983659..2984456 Burkholderia cenocepacia J2315 6930153 YP_002235235.1 CDS BCAM2634a NC_011001.1 2984611 2985123 D putative chloramphenicol resistance protein 2984611..2985123 Burkholderia cenocepacia J2315 6930154 YP_002235236.1 CDS BCAM2635 NC_011001.1 2985459 2985692 R hypothetical protein complement(2985459..2985692) Burkholderia cenocepacia J2315 6930155 YP_002235237.1 CDS BCAM2636 NC_011001.1 2986022 2986858 R putative transposase complement(2986022..2986858) Burkholderia cenocepacia J2315 6930156 YP_002235238.1 CDS BCAM2637 NC_011001.1 2986858 2987382 R putative transposase complement(2986858..2987382) Burkholderia cenocepacia J2315 6930157 YP_002235239.1 CDS BCAM2638 NC_011001.1 2987468 2988304 R hypothetical protein complement(2987468..2988304) Burkholderia cenocepacia J2315 6930158 YP_002235240.1 CDS BCAM2639 NC_011001.1 2989146 2989583 R hypothetical protein complement(2989146..2989583) Burkholderia cenocepacia J2315 6930159 YP_002235241.1 CDS BCAM2640 NC_011001.1 2989961 2990620 R putative methyltransferase complement(2989961..2990620) Burkholderia cenocepacia J2315 6930160 YP_002235242.1 CDS BCAM2640A NC_011001.1 2990784 2991011 R hypothetical protein complement(2990784..2991011) Burkholderia cenocepacia J2315 6930161 YP_002235243.1 CDS BCAM2642 NC_011001.1 2991208 2991627 R hypothetical protein complement(2991208..2991627) Burkholderia cenocepacia J2315 6930162 YP_002235244.1 CDS BCAM2643 NC_011001.1 2991870 2993291 D family S12 serine peptidase; beta-lactamase family protein 2991870..2993291 Burkholderia cenocepacia J2315 6930163 YP_002235245.1 CDS BCAM2644 NC_011001.1 2993370 2994041 R putative glutathione S-transferase complement(2993370..2994041) Burkholderia cenocepacia J2315 6930164 YP_002235246.1 CDS BCAM2645 NC_011001.1 2994066 2995583 R NAD dependent epimerase/dehydratase family protein complement(2994066..2995583) Burkholderia cenocepacia J2315 6930165 YP_002235247.1 CDS BCAM2646 NC_011001.1 2995562 2996416 R hypothetical protein complement(2995562..2996416) Burkholderia cenocepacia J2315 6930166 YP_002235248.1 CDS BCAM2647 NC_011001.1 2996525 2996995 R hypothetical protein complement(2996525..2996995) Burkholderia cenocepacia J2315 6930167 YP_002235249.1 CDS BCAM2648 NC_011001.1 2996992 2998311 R NAD dependent epimerase/dehydratase family protein complement(2996992..2998311) Burkholderia cenocepacia J2315 6930168 YP_002235250.1 CDS BCAM2649 NC_011001.1 2998400 2998933 R hypothetical protein complement(2998400..2998933) Burkholderia cenocepacia J2315 6930169 YP_002235251.1 CDS BCAM2650 NC_011001.1 2999101 3000303 D enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 2999101..3000303 Burkholderia cenocepacia J2315 6930170 YP_002235252.1 CDS BCAM2651 NC_011001.1 3000364 3001068 R short chain dehydrogenase complement(3000364..3001068) Burkholderia cenocepacia J2315 6930171 YP_002235253.1 CDS BCAM2652 NC_011001.1 3001384 3001968 D TetR family regulatory protein 3001384..3001968 Burkholderia cenocepacia J2315 6930172 YP_002235254.1 CDS BCAM2653 NC_011001.1 3002008 3002586 R hypothetical protein complement(3002008..3002586) Burkholderia cenocepacia J2315 6930173 YP_002235255.1 CDS BCAM2654 NC_011001.1 3002749 3003279 R putative acetyltransferase complement(3002749..3003279) Burkholderia cenocepacia J2315 6930174 YP_002235256.1 CDS BCAM2655 NC_011001.1 3003484 3003849 D ArsR family regulatory protein 3003484..3003849 Burkholderia cenocepacia J2315 6930175 YP_002235257.1 CDS BCAM2656 NC_011001.1 3003821 3004306 D putative Hsp90 family protein 3003821..3004306 Burkholderia cenocepacia J2315 6930176 YP_002235258.1 CDS BCAM2657 NC_011001.1 3004426 3004902 D hypothetical protein 3004426..3004902 Burkholderia cenocepacia J2315 6930177 YP_002235259.1 CDS BCAM2658 NC_011001.1 3004918 3006033 R putative amidohydrolase complement(3004918..3006033) Burkholderia cenocepacia J2315 6930178 YP_002235260.1 CDS BCAM2659 NC_011001.1 3006035 3007342 R putative tartrate transporter complement(3006035..3007342) Burkholderia cenocepacia J2315 6930179 YP_002235261.1 CDS BCAM2660 NC_011001.1 3007425 3008717 R putative CoA transferase family complement(3007425..3008717) Burkholderia cenocepacia J2315 6930180 YP_002235262.1 CDS BCAM2661 NC_011001.1 3008714 3009700 R putative Hgml family protein complement(3008714..3009700) Burkholderia cenocepacia J2315 6930181 YP_002235263.1 CDS BCAM2662 NC_011001.1 3009873 3010691 D IclR family regulatory protein 3009873..3010691 Burkholderia cenocepacia J2315 6930182 YP_002235264.1 CDS BCAM2663 NC_011001.1 3010838 3011476 D DsbA-like thioredoxin protein 3010838..3011476 Burkholderia cenocepacia J2315 6930183 YP_002235265.1 CDS BCAM2664 NC_011001.1 3011507 3012490 R LysR family regulatory protein complement(3011507..3012490) Burkholderia cenocepacia J2315 6930184 YP_002235266.1 CDS BCAM2665 NC_011001.1 3012592 3013824 D major facilitator superfamily protein 3012592..3013824 Burkholderia cenocepacia J2315 6930185 YP_002235267.1 CDS BCAM2666 NC_011001.1 3014219 3014944 D putative permease 3014219..3014944 Burkholderia cenocepacia J2315 6930186 YP_002235268.1 CDS BCAM2667 NC_011001.1 3015044 3015703 R glutathione S-transferase complement(3015044..3015703) Burkholderia cenocepacia J2315 6930187 YP_002235269.1 CDS BCAM2668 NC_011001.1 3015829 3016899 R metallo-beta-lactamase superfamily protein complement(3015829..3016899) Burkholderia cenocepacia J2315 6930188 YP_002235270.1 CDS BCAM2669 NC_011001.1 3017180 3018085 D specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 3017180..3018085 Burkholderia cenocepacia J2315 6930189 YP_002235271.1 CDS BCAM2670 NC_011001.1 3018249 3018461 D hypothetical protein 3018249..3018461 Burkholderia cenocepacia J2315 6930190 YP_002235272.1 CDS ltaE NC_011001.1 3018566 3019579 R putative low-specificity L-threonine aldolase complement(3018566..3019579) Burkholderia cenocepacia J2315 6930191 YP_002235273.1 CDS BCAM2672 NC_011001.1 3019697 3020248 R hypothetical protein complement(3019697..3020248) Burkholderia cenocepacia J2315 6930531 YP_002235274.1 CDS BCAM2673 NC_011001.1 3020262 3020585 R putative lipoprotein complement(3020262..3020585) Burkholderia cenocepacia J2315 6930192 YP_002235275.1 CDS BCAM2674 NC_011001.1 3021055 3022467 D putative cytochrome oxidase subunit I 3021055..3022467 Burkholderia cenocepacia J2315 6930193 YP_002235276.1 CDS BCAM2675 NC_011001.1 3022497 3023504 D putative cytochrome oxidase subunit II 3022497..3023504 Burkholderia cenocepacia J2315 6930194 YP_002235277.1 CDS BCAM2676 NC_011001.1 3023476 3023655 D This CDS overlaps 29 nt at the N-terminus with the preceding CDS; hypothetical protein 3023476..3023655 Burkholderia cenocepacia J2315 6930195 YP_002235278.1 CDS BCAM2677 NC_011001.1 3023851 3024045 R hypothetical protein complement(3023851..3024045) Burkholderia cenocepacia J2315 6930196 YP_002235279.1 CDS BCAM2678 NC_011001.1 3024225 3025871 R hypothetical protein complement(3024225..3025871) Burkholderia cenocepacia J2315 6930197 YP_002235280.1 CDS BCAM2679 NC_011001.1 3026111 3026374 D hypothetical protein 3026111..3026374 Burkholderia cenocepacia J2315 6930198 YP_002235281.1 CDS BCAM2680 NC_011001.1 3026443 3030267 R hypothetical protein complement(3026443..3030267) Burkholderia cenocepacia J2315 6930199 YP_002235282.1 CDS BCAM2681 NC_011001.1 3030419 3031855 R putative lipoprotein complement(3030419..3031855) Burkholderia cenocepacia J2315 6930200 YP_002235283.1 CDS BCAM2682 NC_011001.1 3032303 3032626 D putative HicB family protein 3032303..3032626 Burkholderia cenocepacia J2315 6930201 YP_002235284.1 CDS BCAM2683 NC_011001.1 3032816 3035878 D putative cation-transporting ATPase membrane protein 3032816..3035878 Burkholderia cenocepacia J2315 6930202 YP_002235285.1 CDS BCAM2684 NC_011001.1 3036013 3036492 R putative acetyltransferase complement(3036013..3036492) Burkholderia cenocepacia J2315 6930203 YP_002235286.1 CDS BCAM2685 NC_011001.1 3036651 3036806 R hypothetical protein complement(3036651..3036806) Burkholderia cenocepacia J2315 6930204 YP_002235287.1 CDS BCAM2686 NC_011001.1 3036982 3038121 R hypothetical protein complement(3036982..3038121) Burkholderia cenocepacia J2315 6930205 YP_002235288.1 CDS BCAM2687 NC_011001.1 3038418 3039116 R MgtC family membrane protein complement(3038418..3039116) Burkholderia cenocepacia J2315 6930206 YP_002235289.1 CDS BCAM2688 NC_011001.1 3039232 3040341 D putative isomerase 3039232..3040341 Burkholderia cenocepacia J2315 6930207 YP_002235290.1 CDS tar NC_011001.1 3040314 3041933 R putative methyl-accepting chemotaxis protein complement(3040314..3041933) Burkholderia cenocepacia J2315 6930208 YP_002235291.1 CDS BCAM2690 NC_011001.1 3042215 3042658 D putative thioesterase 3042215..3042658 Burkholderia cenocepacia J2315 6930647 YP_002235292.1 CDS BCAM2691 NC_011001.1 3042717 3043769 R alpha-methylacyl-CoA racemase complement(3042717..3043769) Burkholderia cenocepacia J2315 6930209 YP_002235293.1 CDS BCAM2692 NC_011001.1 3043895 3044644 R IclR family regulatory protein complement(3043895..3044644) Burkholderia cenocepacia J2315 6930210 YP_002235294.1 CDS BCAM2693 NC_011001.1 3044779 3045561 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3044779..3045561 Burkholderia cenocepacia J2315 6930211 YP_002235295.1 CDS BCAM2694 NC_011001.1 3045642 3046862 D putative L-carnitine dehydratase/bile acid-inducible protein 3045642..3046862 Burkholderia cenocepacia J2315 6930212 YP_002235296.1 CDS caiD NC_011001.1 3046859 3047656 D putative carnitinyl-CoA dehydratase 3046859..3047656 Burkholderia cenocepacia J2315 6930213 YP_002235297.1 CDS BCAM2696 NC_011001.1 3047720 3048790 D putative gram-negative porin 3047720..3048790 Burkholderia cenocepacia J2315 6930403 YP_002235298.1 CDS BCAM2697 NC_011001.1 3048795 3050123 D major facilitator superfamily protein 3048795..3050123 Burkholderia cenocepacia J2315 6930214 YP_002235299.1 CDS BCAM2698 NC_011001.1 3050162 3051316 D putative acyl-CoA dehydrogenase 3050162..3051316 Burkholderia cenocepacia J2315 6930215 YP_002235300.1 CDS BCAM2699 NC_011001.1 3051355 3052293 D family S9 unassigned serine peptidase; putative hydrolase 3051355..3052293 Burkholderia cenocepacia J2315 6930216 YP_002235301.1 CDS BCAM2700 NC_011001.1 3052352 3053542 R hypothetical protein complement(3052352..3053542) Burkholderia cenocepacia J2315 6930217 YP_002235302.1 CDS acnA NC_011001.1 3053567 3056161 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(3053567..3056161) Burkholderia cenocepacia J2315 6930218 YP_002235303.1 CDS prpC NC_011001.1 3056247 3057419 R catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase complement(3056247..3057419) Burkholderia cenocepacia J2315 6930327 YP_002235304.1 CDS prpB NC_011001.1 3057460 3058437 R catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase complement(3057460..3058437) Burkholderia cenocepacia J2315 6930616 YP_002235305.1 CDS prpR NC_011001.1 3058590 3060512 D putative sigma interaction-related Fis-family transcriptional regulator 3058590..3060512 Burkholderia cenocepacia J2315 6930615 YP_002235306.1 CDS BCAM2705 NC_011001.1 3060528 3061181 R hypothetical protein complement(3060528..3061181) Burkholderia cenocepacia J2315 6930618 YP_002235307.1 CDS BCAM2706 NC_011001.1 3061436 3061819 D putative glyoxalase/bleomycin resistance protein 3061436..3061819 Burkholderia cenocepacia J2315 6930219 YP_002235308.1 CDS BCAM2707 NC_011001.1 3062007 3062855 R putative FAA-hydrolase family protein complement(3062007..3062855) Burkholderia cenocepacia J2315 6930220 YP_002235309.1 CDS BCAM2708 NC_011001.1 3063512 3064333 D IclR family regulatory protein 3063512..3064333 Burkholderia cenocepacia J2315 6930221 YP_002235310.1 CDS BCAM2709 NC_011001.1 3064519 3065061 D hypothetical protein 3064519..3065061 Burkholderia cenocepacia J2315 6930222 YP_002235311.1 CDS BCAM2710 NC_011001.1 3065717 3068074 R putative acetyl-CoA synthetase complement(3065717..3068074) Burkholderia cenocepacia J2315 6930223 YP_002235312.1 CDS BCAM2711 NC_011001.1 3068656 3068961 R H-NS histone family protein complement(3068656..3068961) Burkholderia cenocepacia J2315 6930224 YP_002235313.1 CDS BCAM2712 NC_011001.1 3069065 3069337 R hypothetical protein complement(3069065..3069337) Burkholderia cenocepacia J2315 6930225 YP_002235314.1 CDS BCAM2713 NC_011001.1 3069399 3069926 R hypothetical protein complement(3069399..3069926) Burkholderia cenocepacia J2315 6930226 YP_002235315.1 CDS BCAM2714 NC_011001.1 3070213 3071232 R putative transposase complement(3070213..3071232) Burkholderia cenocepacia J2315 6930227 YP_002235316.1 CDS BCAM2715 NC_011001.1 3071407 3072894 R putative sigma-54 dependent transcriptional regulator complement(3071407..3072894) Burkholderia cenocepacia J2315 6930228 YP_002235317.1 CDS BCAM2716 NC_011001.1 3073211 3074614 D putative citrate transporter 3073211..3074614 Burkholderia cenocepacia J2315 6930229 YP_002235318.1 CDS BCAM2717 NC_011001.1 3074960 3075211 D hypothetical protein 3074960..3075211 Burkholderia cenocepacia J2315 6930230 YP_002235319.1 CDS BCAM2718 NC_011001.1 3075251 3076846 R putative lipoprotein complement(3075251..3076846) Burkholderia cenocepacia J2315 6930231 YP_002235320.1 CDS BCAM2719 NC_011001.1 3077106 3077669 R GNAT family acetyltransferase complement(3077106..3077669) Burkholderia cenocepacia J2315 6930232 YP_002235321.1 CDS BCAM2720 NC_011001.1 3078187 3080526 D putative phospholipase C 3078187..3080526 Burkholderia cenocepacia J2315 6930233 YP_002235322.1 CDS BCAM2721 NC_011001.1 3080803 3081072 D hypothetical protein 3080803..3081072 Burkholderia cenocepacia J2315 6930234 YP_002235323.1 CDS BCAM2722 NC_011001.1 3081227 3082219 D hypothetical protein 3081227..3082219 Burkholderia cenocepacia J2315 6930235 YP_002235324.1 CDS BCAM2723 NC_011001.1 3082281 3083753 R putative outer membrane porin protein complement(3082281..3083753) Burkholderia cenocepacia J2315 6930236 YP_002235325.1 CDS oppF NC_011001.1 3083913 3084932 R putative oligopeptide ABC transporter ATP-binding protein complement(3083913..3084932) Burkholderia cenocepacia J2315 6930237 YP_002235326.1 CDS oppD NC_011001.1 3084929 3085909 R putative oligopeptide ABC transporter ATP-binding protein complement(3084929..3085909) Burkholderia cenocepacia J2315 6930575 YP_002235327.1 CDS oppC NC_011001.1 3085924 3086826 R putative ABC transporter system permease complement(3085924..3086826) Burkholderia cenocepacia J2315 6930574 YP_002235328.1 CDS oppB NC_011001.1 3086830 3087768 R putative oligopeptide transporter permease complement(3086830..3087768) Burkholderia cenocepacia J2315 6930573 YP_002235329.1 CDS oppA NC_011001.1 3087780 3089393 R putative periplasmic oligopeptide-binding protein precursor complement(3087780..3089393) Burkholderia cenocepacia J2315 6930572 YP_002235330.1 CDS BCAM2729 NC_011001.1 3089573 3090151 R MerR family regulatory protein complement(3089573..3090151) Burkholderia cenocepacia J2315 6930571 YP_002235331.1 CDS BCAM2730 NC_011001.1 3090651 3092168 D putative tripeptide permease 3090651..3092168 Burkholderia cenocepacia J2315 6930238 YP_002235332.1 CDS BCAM2731 NC_011001.1 3092538 3093662 R hypothetical protein complement(3092538..3093662) Burkholderia cenocepacia J2315 6930239 YP_002235333.1 CDS BCAM2732 NC_011001.1 3094071 3094970 R hypothetical protein complement(3094071..3094970) Burkholderia cenocepacia J2315 6930240 YP_002235334.1 CDS BCAM2733 NC_011001.1 3094987 3095283 R catalyzes the hydrolysis of acylphosphate; acylphosphatase complement(3094987..3095283) Burkholderia cenocepacia J2315 6930241 YP_002235335.1 CDS BCAM2735 NC_011001.1 3095436 3096443 D NAD dependent epimerase/dehydratase family protein 3095436..3096443 Burkholderia cenocepacia J2315 6930242 YP_002235336.1 CDS BCAM2736 NC_011001.1 3096552 3097967 D hypothetical protein 3096552..3097967 Burkholderia cenocepacia J2315 6930243 YP_002235337.1 CDS BCAM2737 NC_011001.1 3098076 3099263 R putative glycosyl transferase complement(3098076..3099263) Burkholderia cenocepacia J2315 6930244 YP_002235338.1 CDS ispH NC_011001.1 3099666 3100607 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3099666..3100607 Burkholderia cenocepacia J2315 6930245 YP_002235339.1 CDS BCAM2739 NC_011001.1 3100620 3101780 D MoaA/NifB/PqqE family protein 3100620..3101780 Burkholderia cenocepacia J2315 6930516 YP_002235340.1 CDS BCAM2739A NC_011001.1 3101938 3102198 R hypothetical protein complement(3101938..3102198) Burkholderia cenocepacia J2315 6930246 YP_002235341.1 CDS BCAM2740 NC_011001.1 3102365 3102844 R hypothetical protein complement(3102365..3102844) Burkholderia cenocepacia J2315 6930247 YP_002235342.1 CDS BCAM2741 NC_011001.1 3103068 3103445 R hypothetical protein complement(3103068..3103445) Burkholderia cenocepacia J2315 6930248 YP_002235343.1 CDS BCAM2742 NC_011001.1 3103935 3104288 D hypothetical protein 3103935..3104288 Burkholderia cenocepacia J2315 6930249 YP_002235344.1 CDS BCAM2743 NC_011001.1 3104407 3104832 D hypothetical protein 3104407..3104832 Burkholderia cenocepacia J2315 6930250 YP_002235345.1 CDS BCAM2744 NC_011001.1 3104893 3105513 R haemolysin-III related protein complement(3104893..3105513) Burkholderia cenocepacia J2315 6930251 YP_002235346.1 CDS BCAM2745 NC_011001.1 3105722 3105928 R hypothetical protein complement(3105722..3105928) Burkholderia cenocepacia J2315 6930252 YP_002235347.1 CDS cstA NC_011001.1 3105941 3108019 R carbon starvation protein A complement(3105941..3108019) Burkholderia cenocepacia J2315 6930253 YP_002235348.1 CDS BCAM2747 NC_011001.1 3108288 3109100 D putative epimerase 3108288..3109100 Burkholderia cenocepacia J2315 6930428 YP_002235349.1 CDS BCAM2748 NC_011001.1 3109088 3109981 D putative sigma factor 3109088..3109981 Burkholderia cenocepacia J2315 6930254 YP_002235350.1 CDS BCAM2749 NC_011001.1 3110176 3110655 D carboxymuconolactone decarboxylase family protein 3110176..3110655 Burkholderia cenocepacia J2315 6930255 YP_002235351.1 CDS BCAM2750 NC_011001.1 3110732 3111136 D hypothetical protein 3110732..3111136 Burkholderia cenocepacia J2315 6930256 YP_002235352.1 CDS BCAM2751 NC_011001.1 3111248 3112252 D LysR family regulatory protein 3111248..3112252 Burkholderia cenocepacia J2315 6930257 YP_002235353.1 CDS BCAM2752 NC_011001.1 3112458 3113213 D NAD dependent epimerase/dehydratase family protein 3112458..3113213 Burkholderia cenocepacia J2315 6930258 YP_002235354.1 CDS BCAM2753 NC_011001.1 3113239 3113754 D putative organic hydroperoxide resistance protein 3113239..3113754 Burkholderia cenocepacia J2315 6930259 YP_002235355.1 CDS BCAM2754 NC_011001.1 3113795 3114547 D putative ketoreductase 3113795..3114547 Burkholderia cenocepacia J2315 6930260 YP_002235356.1 CDS BCAM2755 NC_011001.1 3114604 3115032 R hypothetical protein complement(3114604..3115032) Burkholderia cenocepacia J2315 6930261 YP_002235357.1 CDS cblR NC_011001.1 3115330 3116046 R two-component regulatory system response regulator protein complement(3115330..3116046) Burkholderia cenocepacia J2315 6930262 YP_002235358.1 CDS cblT NC_011001.1 3116427 3118961 D two-component regulatory system sensor kinase 3116427..3118961 Burkholderia cenocepacia J2315 6930411 YP_002235359.1 CDS cblS NC_011001.1 3119001 3121154 R two-component regulatory system sensor kinase complement(3119001..3121154) Burkholderia cenocepacia J2315 6930413 YP_002235360.1 CDS cblD NC_011001.1 3121211 3122374 R putative minor pilin and initiator complement(3121211..3122374) Burkholderia cenocepacia J2315 6930412 YP_002235361.1 CDS cblC NC_011001.1 3122450 3125152 R putative outer membrane usher complement(3122450..3125152) Burkholderia cenocepacia J2315 6930410 YP_002235362.1 CDS cblA NC_011001.1 3125238 3125738 R giant cable pilus complement(3125238..3125738) Burkholderia cenocepacia J2315 6930409 YP_002235363.1 CDS cblB NC_011001.1 3125742 3126524 R giant cable pilus chaperone protein complement(3125742..3126524) Burkholderia cenocepacia J2315 6930407 YP_002235364.1 CDS aroG NC_011001.1 3127202 3128332 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3127202..3128332) Burkholderia cenocepacia J2315 6930408 YP_002235365.1 CDS BCAM2764 NC_011001.1 3128525 3129841 R putative exported lipase complement(3128525..3129841) Burkholderia cenocepacia J2315 6930354 YP_002235366.1 CDS BCAM2765 NC_011001.1 3130245 3130799 D Possible gene remnant. Similar to the C-terminal region of Pseudomonas fluorescens hypothetical protein UniProt:Q4KEN9 (EMBL:CP000076 (219 aa) fasta scores: E()=2.2e-34, 53.631% id in 179 aa; hypothetical protein 3130245..3130799 Burkholderia cenocepacia J2315 6930263 YP_002235367.1 CDS BCAM2766 NC_011001.1 3130855 3132120 D hypothetical protein 3130855..3132120 Burkholderia cenocepacia J2315 6930264 YP_002235368.1 CDS BCAM2767 NC_011001.1 3132164 3132874 R hypothetical protein complement(3132164..3132874) Burkholderia cenocepacia J2315 6930265 YP_002235369.1 CDS BCAM2769 NC_011001.1 3133305 3134042 D short chain dehydrogenase 3133305..3134042 Burkholderia cenocepacia J2315 6930266 YP_002235370.1 CDS BCAM2770 NC_011001.1 3134060 3134764 R putative sulfur-binding protein complement(3134060..3134764) Burkholderia cenocepacia J2315 6930267 YP_002235371.1 CDS BCAM2771 NC_011001.1 3134761 3135657 R putative dihydrodipicolinate synthetase complement(3134761..3135657) Burkholderia cenocepacia J2315 6930268 YP_002235372.1 CDS BCAM2772 NC_011001.1 3135708 3136490 R class II aldolase/adducin domain-containing protein complement(3135708..3136490) Burkholderia cenocepacia J2315 6930269 YP_002235373.1 CDS BCAM2773 NC_011001.1 3136625 3137167 D putative DNA-binding protein 3136625..3137167 Burkholderia cenocepacia J2315 6930270 YP_002235374.1 CDS BCAM2774 NC_011001.1 3137199 3137936 D GntR family regulatory protein 3137199..3137936 Burkholderia cenocepacia J2315 6930271 YP_002235375.1 CDS BCAM2775 NC_011001.1 3138014 3138889 R putative dioxygenase complement(3138014..3138889) Burkholderia cenocepacia J2315 6930272 YP_002235376.1 CDS BCAM2776 NC_011001.1 3138894 3139697 R periplasmic solute-binding protein complement(3138894..3139697) Burkholderia cenocepacia J2315 6930273 YP_002235377.1 CDS BCAM2777 NC_011001.1 3140222 3141085 D LysR family regulatory protein 3140222..3141085 Burkholderia cenocepacia J2315 6930274 YP_002235378.1 CDS BCAM2778 NC_011001.1 3141149 3141613 R putative exported cyclase complement(3141149..3141613) Burkholderia cenocepacia J2315 6930275 YP_002235379.1 CDS BCAM2779 NC_011001.1 3141679 3142863 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(3141679..3142863) Burkholderia cenocepacia J2315 6930276 YP_002235380.1 CDS BCAM2780 NC_011001.1 3142931 3144130 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(3142931..3144130) Burkholderia cenocepacia J2315 6930277 YP_002235381.1 CDS BCAM2781 NC_011001.1 3144584 3145192 D hypothetical protein 3144584..3145192 Burkholderia cenocepacia J2315 6930278 YP_002235382.1 CDS BCAM2782 NC_011001.1 3145346 3145915 D Similar to ) burkholderia cenocepacia hi2424. gcn5-related n-acetyltransferase. UniProt:Q4LRL3 (EMBL:AAHL01000023 (192 aa) fasta scores: E()=2.5e-59, 92.308% id in 169 aa; putative acetyltransferase 3145346..3145915 Burkholderia cenocepacia J2315 6930279 YP_002235383.1 CDS pehC NC_011001.1 3145988 3147985 R putative polygalacturonate hydrolase complement(3145988..3147985) Burkholderia cenocepacia J2315 6930280 YP_002235384.1 CDS BCAM2784 NC_011001.1 3148350 3149708 D aminotransferase 3148350..3149708 Burkholderia cenocepacia J2315 6930595 YP_002235385.1 CDS BCAM2785 NC_011001.1 3149763 3150947 R subfamily M20D metallo peptidase; subfamily M20D metallopeptidase complement(3149763..3150947) Burkholderia cenocepacia J2315 6930281 YP_002235386.1 CDS BCAM2786 NC_011001.1 3150989 3152221 R catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase complement(3150989..3152221) Burkholderia cenocepacia J2315 6930282 YP_002235387.1 CDS BCAM2787 NC_011001.1 3152412 3152888 D AsnC family regulatory protein 3152412..3152888 Burkholderia cenocepacia J2315 6930283 YP_002235388.1 CDS hcaG NC_011001.1 3152956 3154644 R putative chlorogenate esterase complement(3152956..3154644) Burkholderia cenocepacia J2315 6930284 YP_002235389.1 CDS BCAM2789 NC_011001.1 3154714 3155883 R putative gram-negative porin complement(3154714..3155883) Burkholderia cenocepacia J2315 6930490 YP_002235390.1 CDS BCAM2790 NC_011001.1 3155931 3157136 R putative 3-hydroxyphenylpropionic transporter MhpT complement(3155931..3157136) Burkholderia cenocepacia J2315 6930285 YP_002235391.1 CDS fcs NC_011001.1 3157362 3159248 R catalyzes the conversion of ferulic acid to feruloyl-CoA; feruloyl-CoA synthase complement(3157362..3159248) Burkholderia cenocepacia J2315 6930286 YP_002235392.1 CDS BCAM2792 NC_011001.1 3159260 3160708 R putative feroylate hydratase complement(3159260..3160708) Burkholderia cenocepacia J2315 6930451 YP_002235393.1 CDS BCAM2793 NC_011001.1 3160780 3161610 R catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA; p-hydroxycinnamoyl CoA hydratase/lyase complement(3160780..3161610) Burkholderia cenocepacia J2315 6930287 YP_002235394.1 CDS BCAM2794 NC_011001.1 3161846 3162349 R MarR family regulatory protein complement(3161846..3162349) Burkholderia cenocepacia J2315 6930288 YP_002235395.1 CDS BCAM2795 NC_011001.1 3162452 3163360 R hypothetical protein complement(3162452..3163360) Burkholderia cenocepacia J2315 6930289 YP_002235396.1 CDS araH NC_011001.1 3163417 3164442 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease complement(3163417..3164442) Burkholderia cenocepacia J2315 6930290 YP_002235397.1 CDS araG NC_011001.1 3164479 3166026 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein complement(3164479..3166026) Burkholderia cenocepacia J2315 6930291 YP_002235398.1 CDS BCAM2798 NC_011001.1 3166048 3167061 R putative ABC transporter solute-binding protein complement(3166048..3167061) Burkholderia cenocepacia J2315 6930292 YP_002235399.1 CDS gal NC_011001.1 3167155 3168084 R putative galactose 1-dehydrogenase complement(3167155..3168084) Burkholderia cenocepacia J2315 6930293 YP_002235400.1 CDS BCAM2800 NC_011001.1 3168110 3169039 R putative dehydratase complement(3168110..3169039) Burkholderia cenocepacia J2315 6930465 YP_002235401.1 CDS BCAM2801 NC_011001.1 3169156 3170907 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(3169156..3170907) Burkholderia cenocepacia J2315 6930294 YP_002235402.1 CDS BCAM2802 NC_011001.1 3171022 3171972 D LysR family regulatory protein 3171022..3171972 Burkholderia cenocepacia J2315 6930295 YP_002235403.1 CDS BCAM2803 NC_011001.1 3171991 3172479 R putative stress-induced protein complement(3171991..3172479) Burkholderia cenocepacia J2315 6930296 YP_002235404.1 CDS BCAM2804 NC_011001.1 3172582 3173241 D GntR family regulatory protein 3172582..3173241 Burkholderia cenocepacia J2315 6930297 YP_002235405.1 CDS BCAM2805 NC_011001.1 3173269 3174294 R LacI family regulatory protein complement(3173269..3174294) Burkholderia cenocepacia J2315 6930298 YP_002235406.1 CDS BCAM2806 NC_011001.1 3174484 3175641 D putative sugar ABC transporter ATP-binding protein 3174484..3175641 Burkholderia cenocepacia J2315 6930299 YP_002235407.1 CDS bgaB NC_011001.1 3175650 3177635 D putative beta-galactosidase 3175650..3177635 Burkholderia cenocepacia J2315 6930300 YP_002235408.1 CDS BCAM2808 NC_011001.1 3177696 3178955 D putative extracellular solute-binding protein 3177696..3178955 Burkholderia cenocepacia J2315 6930399 YP_002235409.1 CDS BCAM2809 NC_011001.1 3179082 3179954 D putative ABC transporter system permease 3179082..3179954 Burkholderia cenocepacia J2315 6930301 YP_002235410.1 CDS BCAM2810 NC_011001.1 3179976 3180827 D putative ABC transporter system permease 3179976..3180827 Burkholderia cenocepacia J2315 6930302 YP_002235411.1 CDS BCAM2811 NC_011001.1 3181043 3181306 R hypothetical protein complement(3181043..3181306) Burkholderia cenocepacia J2315 6930303 YP_002235412.1 CDS BCAM2812 NC_011001.1 3181524 3182468 D LysR family regulatory protein 3181524..3182468 Burkholderia cenocepacia J2315 6930304 YP_002235413.1 CDS BCAM2813 NC_011001.1 3182543 3182947 R Similar, but truncated at the N-terminus, to Burkholderia ambifaria AMMD hypothetical protein UniProt:Q3FCG1 (EMBL:AAJL01000004 (179 aa) fasta scores: E()=3.8e-44, 89.552% id in 134 aa, and similar, but extended at the N-terminus, to Burkholderia cenocepacia HI2424 hypothetical protein UniProt:Q4LRQ3 (EMBL:AAHL01000023 (127 aa) fasta scores: E()=6.7e-44, 94.488% id in 127 aa; hypothetical protein complement(3182543..3182947) Burkholderia cenocepacia J2315 6930305 YP_002235414.1 CDS rhlE NC_011001.1 3183098 3184552 R putative ATP-dependent RNA helicase RhlE complement(3183098..3184552) Burkholderia cenocepacia J2315 6930306 YP_002235415.1 CDS BCAM2815 NC_011001.1 3184588 3186090 R putative 2-nitropropane dioxygenase complement(3184588..3186090) Burkholderia cenocepacia J2315 6930626 YP_002235416.1 CDS BCAM2816 NC_011001.1 3186286 3187050 R DNA-binding transcriptional regulator GlcC complement(3186286..3187050) Burkholderia cenocepacia J2315 6930307 YP_002235417.1 CDS glcD NC_011001.1 3187275 3188774 D glycolate oxidase subunit GlcD 3187275..3188774 Burkholderia cenocepacia J2315 6930308 YP_002235418.1 CDS glcE NC_011001.1 3188774 3189850 D glycolate oxidase FAD binding subunit 3188774..3189850 Burkholderia cenocepacia J2315 6930472 YP_002235419.1 CDS glcF NC_011001.1 3189875 3191095 D glycolate oxidase iron-sulfur subunit 3189875..3191095 Burkholderia cenocepacia J2315 6930473 YP_002235420.1 CDS glcG NC_011001.1 3191118 3191522 D GlcG protein 3191118..3191522 Burkholderia cenocepacia J2315 6930474 YP_002235421.1 CDS glcB NC_011001.1 3191562 3193736 D catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 3191562..3193736 Burkholderia cenocepacia J2315 6930475 YP_002235422.1 CDS BCAM2822 NC_011001.1 3194274 3195839 D putative diguanylate cyclase 3194274..3195839 Burkholderia cenocepacia J2315 6930471 YP_002235423.1 CDS BCAM2823 NC_011001.1 3196014 3197396 D two-component regulatory system sensor kinase 3196014..3197396 Burkholderia cenocepacia J2315 6930309 YP_002235424.1 CDS BCAM2824 NC_011001.1 3197429 3198073 D two-component regulatory system response regulator protein 3197429..3198073 Burkholderia cenocepacia J2315 6930310 YP_002235425.1 CDS BCAM2825 NC_011001.1 3198119 3199639 R major facilitator superfamily protein complement(3198119..3199639) Burkholderia cenocepacia J2315 6930311 YP_002235426.1 CDS BCAM2826 NC_011001.1 3199785 3200423 D TetR family regulatory protein 3199785..3200423 Burkholderia cenocepacia J2315 6930312 YP_002235427.1 CDS BCAM2827 NC_011001.1 3200505 3201101 R hypothetical protein complement(3200505..3201101) Burkholderia cenocepacia J2315 6930313 YP_002235428.1 CDS BCAM2828 NC_011001.1 3201429 3204062 D hypothetical protein 3201429..3204062 Burkholderia cenocepacia J2315 6930314 YP_002235429.1 CDS BCAM2829 NC_011001.1 3204055 3205062 D putative VacJ family lipoprotein 3204055..3205062 Burkholderia cenocepacia J2315 6930315 YP_002235430.1 CDS BCAM2830 NC_011001.1 3205167 3205874 R hypothetical protein complement(3205167..3205874) Burkholderia cenocepacia J2315 6930316 YP_002235431.1 CDS shc NC_011001.1 3205878 3207851 R squalene--hopene cyclase complement(3205878..3207851) Burkholderia cenocepacia J2315 6930317 YP_002235432.1 CDS BCAM2832 NC_011001.1 3207864 3209117 R putative flavin containing amine oxidase complement(3207864..3209117) Burkholderia cenocepacia J2315 6930637 YP_002235433.1 CDS BCAM2833 NC_011001.1 3209131 3209979 R squalene/phytoene synthase complement(3209131..3209979) Burkholderia cenocepacia J2315 6930318 YP_002235434.1 CDS BCAM2834 NC_011001.1 3210238 3210570 R hypothetical protein complement(3210238..3210570) Burkholderia cenocepacia J2315 6930319 YP_002235435.1 CDS estC NC_011001.1 3210762 3211646 D family S33 serine peptidase; putative esterase 3210762..3211646 Burkholderia cenocepacia J2315 6930320 YP_002235436.1 CDS BCAM2836 NC_011001.1 3211666 3212604 R putative diguanylate cyclase complement(3211666..3212604) Burkholderia cenocepacia J2315 6930446 YP_002235437.1 CDS BCAM2839 NC_011001.1 3214059 3216308 D two-component regulatory system sensor kinase 3214059..3216308 Burkholderia cenocepacia J2315 6930322 YP_002235438.1 CDS BCAM2840 NC_011001.1 3216369 3216923 R putative NADPH-dependent FMN reductase complement(3216369..3216923) Burkholderia cenocepacia J2315 6930323 YP_001989037.1 CDS BCAS0001 NC_011002.1 1 1317 D hypothetical protein 1..1317 Burkholderia cenocepacia J2315 6407573 YP_002153395.1 CDS BCAS0002 NC_011002.1 1413 2444 R homology to YyaA doesn't extend to N and C termini; putative chromosome partitioning protein complement(1413..2444) Burkholderia cenocepacia J2315 6804499 YP_002153396.1 CDS BCAS0003 NC_011002.1 2437 3132 R ParA protein complement(2437..3132) Burkholderia cenocepacia J2315 6804500 YP_002153397.1 CDS BCAS0004 NC_011002.1 4783 5748 R putative transposase complement(4783..5748) Burkholderia cenocepacia J2315 6804501 YP_002153398.1 CDS BCAS0005 NC_011002.1 6086 7102 R AraC family regulatory protein complement(6086..7102) Burkholderia cenocepacia J2315 6804502 YP_002153399.1 CDS BCAS0006 NC_011002.1 7234 8358 R hypothetical protein complement(7234..8358) Burkholderia cenocepacia J2315 6804503 YP_002153400.1 CDS BCAS0007 NC_011002.1 8442 9095 D TetR family regulatory protein 8442..9095 Burkholderia cenocepacia J2315 6804504 YP_002153401.1 CDS BCAS0008 NC_011002.1 9291 9782 D putative NADPH-dependent FMN reductase 9291..9782 Burkholderia cenocepacia J2315 6804505 YP_002153402.1 CDS BCAS0009 NC_011002.1 9888 10472 R hypothetical protein complement(9888..10472) Burkholderia cenocepacia J2315 6804506 YP_002153403.1 CDS BCAS0010 NC_011002.1 11113 11784 D Similar to Escherichia coli prop effector proQ SWALL:PROQ_ECOLI (SWALL:P45577) (232 aa) fasta scores: E(): 0.015, 30.66% id in 150 aa; homology doesn't extend to N and C termini; putative activator of osmoprotectant transporter 11113..11784 Burkholderia cenocepacia J2315 6804507 YP_002153404.1 CDS BCAS0011 NC_011002.1 12269 13330 D hypothetical protein 12269..13330 Burkholderia cenocepacia J2315 6804508 YP_002153405.1 CDS BCAS0012 NC_011002.1 13637 14227 R putative NifQ protein complement(13637..14227) Burkholderia cenocepacia J2315 6804509 YP_002153406.1 CDS BCAS0013 NC_011002.1 14303 14728 R Similar to Azotobacter vinelandii potential molybdenum-pterin-binding-protein ModG SWALL:Q44529 (EMBL:Z49882) (142 aa) fasta scores: E(): 3.6e-17, 48.57% id in 140 aa, and to the C-terminal region Azotobacter vinelandii molybdenum transport protein ModE modE SWALL:MODE_AZOVI (SWALL:P37733) (270 aa) fasta scores: E(): 5.8e-15, 47.14% id in 140 aa; putative molybdenum transport protein complement(14303..14728) Burkholderia cenocepacia J2315 6804510 YP_002153407.1 CDS BCAS0014 NC_011002.1 14897 16384 R outer membrane efflux protein complement(14897..16384) Burkholderia cenocepacia J2315 6804511 YP_002153408.1 CDS BCAS0015 NC_011002.1 16381 17358 R efflux system transport protein complement(16381..17358) Burkholderia cenocepacia J2315 6804512 YP_002153409.1 CDS BCAS0016 NC_011002.1 17360 17572 R hypothetical protein complement(17360..17572) Burkholderia cenocepacia J2315 6804513 YP_002153410.1 CDS BCAS0017 NC_011002.1 17607 19730 R putative fusaric acid resistance transporter protein complement(17607..19730) Burkholderia cenocepacia J2315 6804514 YP_002153411.1 CDS BCAS0018 NC_011002.1 19727 20206 R MarR family regulatory protein complement(19727..20206) Burkholderia cenocepacia J2315 6804515 YP_002153412.1 CDS BCAS0019 NC_011002.1 20532 21392 D hypothetical protein 20532..21392 Burkholderia cenocepacia J2315 6804516 YP_002153413.1 CDS BCAS0020 NC_011002.1 21431 22594 D putative acyl-CoA dehydrogenase 21431..22594 Burkholderia cenocepacia J2315 6804517 YP_002153414.1 CDS BCAS0021 NC_011002.1 22607 23785 D putative CoA-transferase 22607..23785 Burkholderia cenocepacia J2315 6804518 YP_002153415.1 CDS BCAS0022 NC_011002.1 23805 25202 D putative MmgE/Prp family protein 23805..25202 Burkholderia cenocepacia J2315 6804519 YP_002153416.1 CDS BCAS0023 NC_011002.1 25199 26002 D HpcH/HpaI aldolase/citrate lyase family protein 25199..26002 Burkholderia cenocepacia J2315 6804520 YP_002153417.1 CDS BCAS0024 NC_011002.1 26181 27593 D GntR family regulatory protein 26181..27593 Burkholderia cenocepacia J2315 6804521 YP_002153418.1 CDS eutB NC_011002.1 27692 28672 D catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization; threonine dehydratase 27692..28672 Burkholderia cenocepacia J2315 6804522 YP_002153419.1 CDS BCAS0026 NC_011002.1 28674 29678 D putative cyclodeaminase; ectoine utilization protein EutC 28674..29678 Burkholderia cenocepacia J2315 6804523 YP_002153420.1 CDS BCAS0027 NC_011002.1 29689 30897 D C-terminal region is similar to the C-terminus of Pyrococcus furiosus Xaa-Pro dipeptidase PepQ SWALL:PEPQ_PYRFU (SWALL:P81535) (348 aa) fasta scores: E(): 1.6e-09, 24.47% id in 237 aa. Full length CDS is similar to Agrobacterium tumefaciens Xaa-Pro dipeptidase pepQ SWALL:Q8U6Q0 (EMBL:AE009404) (392 aa) fasta scores: E(): 4e-120, 74.22% id in 388 aa; putative metallopeptidase 29689..30897 Burkholderia cenocepacia J2315 6804524 YP_002153421.1 CDS BCAS0028 NC_011002.1 30902 31927 D succinylglutamate desuccinylase/aspartoacylase family protein 30902..31927 Burkholderia cenocepacia J2315 6804525 YP_002153422.1 CDS BCAS0029 NC_011002.1 31941 32411 D putative LRP family transcriptional regulator 31941..32411 Burkholderia cenocepacia J2315 6804526 YP_002153423.1 CDS BCAS0030 NC_011002.1 32533 34011 D putative succinate-semialdehyde dehydrogenase (NADP+) 32533..34011 Burkholderia cenocepacia J2315 6804527 YP_002153424.1 CDS BCAS0031 NC_011002.1 34032 35426 D hypothetical protein 34032..35426 Burkholderia cenocepacia J2315 6804528 YP_002153425.1 CDS BCAS0032 NC_011002.1 35528 36052 D putative transposase 35528..36052 Burkholderia cenocepacia J2315 6804529 YP_002153426.1 CDS BCAS0033 NC_011002.1 36052 36888 D putative transposase 36052..36888 Burkholderia cenocepacia J2315 6804530 YP_002153427.1 CDS BCAS0034 NC_011002.1 37017 37949 R metallo-beta-lactamase superfamily protein complement(37017..37949) Burkholderia cenocepacia J2315 6804531 YP_002153428.1 CDS BCAS0035 NC_011002.1 38251 39636 R putative proline/betaine transporter complement(38251..39636) Burkholderia cenocepacia J2315 6804532 YP_002153429.1 CDS BCAS0036 NC_011002.1 39786 40682 R LysR family regulatory protein complement(39786..40682) Burkholderia cenocepacia J2315 6804533 YP_002153430.1 CDS BCAS0037 NC_011002.1 40831 42102 D Major Facilitator Superfamily protein 40831..42102 Burkholderia cenocepacia J2315 6804534 YP_002153431.1 CDS BCAS0038 NC_011002.1 42175 43065 D putative aminohydrolase 42175..43065 Burkholderia cenocepacia J2315 6804535 YP_002153432.1 CDS BCAS0039 NC_011002.1 43074 43961 D putative carboxyvinyl-carboxyphosphonate phosphorylmutase 43074..43961 Burkholderia cenocepacia J2315 6804536 YP_002153433.1 CDS BCAS0040 NC_011002.1 44026 45354 D alpha-ketoglutarate permease 44026..45354 Burkholderia cenocepacia J2315 6804537 YP_002153434.1 CDS BCAS0041 NC_011002.1 45529 46929 D radical SAM superfamily protein 45529..46929 Burkholderia cenocepacia J2315 6804538 YP_002153435.1 CDS BCAS0042 NC_011002.1 46926 48071 D putative FAD-dependent oxidoreductase 46926..48071 Burkholderia cenocepacia J2315 6804539 YP_002153436.1 CDS BCAS0043 NC_011002.1 48068 49423 D potentially involved in iron uptake pathway; putative L-lysine 6-monooxygenase 48068..49423 Burkholderia cenocepacia J2315 6804540 YP_002153437.1 CDS BCAS0044 NC_011002.1 49439 50704 D Potentially involved in purine nucleotide biosynthesis; putative phosphoribosylglycinamide synthetase protein 49439..50704 Burkholderia cenocepacia J2315 6804541 YP_002153438.1 CDS BCAS0045 NC_011002.1 50718 52313 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 50718..52313 Burkholderia cenocepacia J2315 6804542 YP_002153439.1 CDS BCAS0046 NC_011002.1 52310 53491 D putative CoA-transferase 52310..53491 Burkholderia cenocepacia J2315 6804543 YP_002153440.1 CDS BCAS0047 NC_011002.1 53478 53828 D hypothetical protein 53478..53828 Burkholderia cenocepacia J2315 6804544 YP_002153441.1 CDS BCAS0048 NC_011002.1 53818 54975 D putative prephenate dehydrogenase 53818..54975 Burkholderia cenocepacia J2315 6804545 YP_002153442.1 CDS BCAS0049 NC_011002.1 54927 55850 D putative auxin efflux carrier family protein 54927..55850 Burkholderia cenocepacia J2315 6804546 YP_002153443.1 CDS BCAS0050 NC_011002.1 55921 56832 D putative amidohydrolase 55921..56832 Burkholderia cenocepacia J2315 6804547 YP_002153444.1 CDS BCAS0051 NC_011002.1 57024 58724 R in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase complement(57024..58724) Burkholderia cenocepacia J2315 6804548 YP_002153445.1 CDS sfnR NC_011002.1 58983 60020 R sigma-54 dependent transcriptional regulator complement(58983..60020) Burkholderia cenocepacia J2315 6804549 YP_002153446.1 CDS msuE NC_011002.1 60588 61148 D Similar to Pseudomonas aeruginosa fmn reductase msuE SWALL:MSUE_PSEAE (SWALL:O31038) (186 aa) fasta scores: E(): 8.7e-38, 63.21% id in 174 aa; possibly involved in sulphur utilisation; FMN reductase 60588..61148 Burkholderia cenocepacia J2315 6803990 YP_002153447.1 CDS BCAS0054 NC_011002.1 61186 62289 D putative luciferase-like monooxygenase 61186..62289 Burkholderia cenocepacia J2315 6803983 YP_002153448.1 CDS BCAS0055 NC_011002.1 62359 63006 R putative transporter-LysE family complement(62359..63006) Burkholderia cenocepacia J2315 6804550 YP_002153449.1 CDS BCAS0056 NC_011002.1 63118 63966 D Similar to Burkholderia cepacia hth-type transcriptional regulator DgdR dgdR SWALL:DGDR_BURCE (SWALL:P16931) (294 aa) fasta scores: E(): 2.1e-22, 32.55% id in 258 aa; homology doesn't extend to C terminus; LysR family regulatory protein 63118..63966 Burkholderia cenocepacia J2315 6804551 YP_002153450.1 CDS BCAS0057 NC_011002.1 63987 64877 R LysR family regulatory protein complement(63987..64877) Burkholderia cenocepacia J2315 6804552 YP_002153451.1 CDS BCAS0058 NC_011002.1 65031 68078 D putative oxidoreductase 65031..68078 Burkholderia cenocepacia J2315 6804553 YP_002153452.1 CDS BCAS0059 NC_011002.1 68165 68467 R putative DNA-binding protein complement(68165..68467) Burkholderia cenocepacia J2315 6804554 YP_002153453.1 CDS BCAS0060 NC_011002.1 68555 69688 R extracellular amino acid-binding protein complement(68555..69688) Burkholderia cenocepacia J2315 6804555 YP_002153454.1 CDS BCAS0061 NC_011002.1 70362 71261 R hypothetical protein complement(70362..71261) Burkholderia cenocepacia J2315 6804556 YP_002153455.1 CDS BCAS0062 NC_011002.1 71409 72296 D homology doesn't extend to C terminus; LysR family regulatory protein 71409..72296 Burkholderia cenocepacia J2315 6804557 YP_002153456.1 CDS BCAS0063 NC_011002.1 72518 73183 D hypothetical protein 72518..73183 Burkholderia cenocepacia J2315 6804558 YP_002153457.1 CDS BCAS0064 NC_011002.1 73241 73708 D hypothetical protein 73241..73708 Burkholderia cenocepacia J2315 6804559 YP_002153458.1 CDS BCAS0065 NC_011002.1 73826 74470 R putative glutathione S-transferase complement(73826..74470) Burkholderia cenocepacia J2315 6804560 YP_002153459.1 CDS BCAS0066 NC_011002.1 74573 75745 R putative porin complement(74573..75745) Burkholderia cenocepacia J2315 6804561 YP_002153460.1 CDS BCAS0067 NC_011002.1 76231 77184 D AraC family regulatory protein 76231..77184 Burkholderia cenocepacia J2315 6804563 YP_002153461.1 CDS BCAS0068 NC_011002.1 77201 78166 R putative transposase complement(77201..78166) Burkholderia cenocepacia J2315 6804564 YP_002153462.1 CDS BCAS0069 NC_011002.1 78847 79482 D two-component regulatory system, response regulator protein 78847..79482 Burkholderia cenocepacia J2315 6804565 YP_002153463.1 CDS BCAS0070 NC_011002.1 79501 80850 R Possible gene remnant. Similar to the C-terminal region of Burkholderia vietnamiensis G4 ATPase-like protein UniProt:Q4BRL4 (EMBL:AAEH02000004 (704 aa) fasta scores: E()=1.4e-119, 76.850% id in 419 aa, and to the full length Burkholderia ambifaria mc40-6 histidine kinase UniProt:A0T569 (EMBL:AAUZ01000001 (472 aa) fasta scores: E()=1.4e-70, 47.511% id in 442 aa; two-component regulatory system, response regulator protein complement(79501..80850) Burkholderia cenocepacia J2315 6804566 YP_002153464.1 CDS BCAS0071 NC_011002.1 81108 81533 D hypothetical protein 81108..81533 Burkholderia cenocepacia J2315 6804567 YP_002153465.1 CDS BCAS0072 NC_011002.1 81672 82040 D Similar to N terminus of Pseudomonas sp. VLB120 transcriptional activator stdR SWALL:O50213 (EMBL:AF031161) (207 aa) fasta scores: E(): 5.5e-11, 37.39% id in 115 aa; two-component regulatory system, response regulator protein 81672..82040 Burkholderia cenocepacia J2315 6804568 YP_002153466.1 CDS BCAS0073 NC_011002.1 82146 83000 D Similar to Sulfolobus acidocaldarius lipolytic enzyme saL SWALL:O73957 (EMBL:AF071233) (314 aa) fasta scores: E(): 4.2e-11, 25.18% id in 278 aa; homology doesn't extend to N terminus; family S33 serine peptidase; putative hydrolase 82146..83000 Burkholderia cenocepacia J2315 6804569 YP_002153467.1 CDS BCAS0074 NC_011002.1 83072 83791 D hypothetical protein 83072..83791 Burkholderia cenocepacia J2315 6804570 YP_002153468.1 CDS BCAS0075 NC_011002.1 83802 84848 D putative alcohol dehydrogenase 83802..84848 Burkholderia cenocepacia J2315 6804571 YP_002153469.1 CDS BCAS0076 NC_011002.1 84845 85564 D hypothetical protein 84845..85564 Burkholderia cenocepacia J2315 6804572 YP_002153470.1 CDS BCAS0077 NC_011002.1 85610 86464 D Similar to Sulfolobus acidocaldarius lipolytic enzyme saL SWALL:O73957 (EMBL:AF071233) (314 aa) fasta scores: E(): 1.4e-17, 29.16% id in 288 aa; homology doesn't extend to N terminus; family S33 serine peptidase; putative hydrolase 85610..86464 Burkholderia cenocepacia J2315 6804573 YP_002153471.1 CDS BCAS0078 NC_011002.1 86496 87503 D putative dehydrogenase, zinc-containing 86496..87503 Burkholderia cenocepacia J2315 6804574 YP_002153472.1 CDS cpoF NC_011002.1 87536 88357 D family S33 serine peptidase; non-heme chloroperoxidase 87536..88357 Burkholderia cenocepacia J2315 6804575 YP_002153473.1 CDS BCAS0080 NC_011002.1 88417 89781 D putative pyridine nucleotide-disulphide oxidoreductase family protein 88417..89781 Burkholderia cenocepacia J2315 6803966 YP_002153474.1 CDS BCAS0081 NC_011002.1 89870 91723 R possibly involved in drug efflux; ABC transporter ATP-binding membrane protein complement(89870..91723) Burkholderia cenocepacia J2315 6804576 YP_002153475.1 CDS BCAS0082 NC_011002.1 91817 92881 R family S33 serine peptidase; serine peptidase, family S33 complement(91817..92881) Burkholderia cenocepacia J2315 6804577 YP_002153476.1 CDS BCAS0083 NC_011002.1 92985 93581 D TetR family regulatory protein 92985..93581 Burkholderia cenocepacia J2315 6804578 YP_002153477.1 CDS BCAS0084 NC_011002.1 93708 94274 D TetR family regulatory protein 93708..94274 Burkholderia cenocepacia J2315 6804579 YP_002153478.1 CDS ohR NC_011002.1 94498 94923 D organic hydroperoxide resistance protein 94498..94923 Burkholderia cenocepacia J2315 6804580 YP_002153479.1 CDS BCAS0086 NC_011002.1 94981 96015 D family S9 unassigned serine peptidase; putative exported lipase 94981..96015 Burkholderia cenocepacia J2315 6803984 YP_002153480.1 CDS BCAS0087 NC_011002.1 96271 96642 D LrgA family membrane protein 96271..96642 Burkholderia cenocepacia J2315 6804581 YP_002153481.1 CDS BCAS0088 NC_011002.1 96639 97373 D LrgB family membrane protein 96639..97373 Burkholderia cenocepacia J2315 6804165 YP_002153482.1 CDS BCAS0089 NC_011002.1 97603 97908 D Similar to central section of Azotobacter vinelandii dihydrolipoyllysine-residue succinyltransferase component of 2- oxoglutarate dehydrogenase complex sucB SWALL:ODO2_AZOVI (SWALL:P20708) (398 aa) fasta scores: E(): 0.69, 35.36% id in 82 aa; hypothetical protein 97603..97908 Burkholderia cenocepacia J2315 6804166 YP_002153483.1 CDS wrbA NC_011002.1 98014 98616 R stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA complement(98014..98616) Burkholderia cenocepacia J2315 6804666 YP_002153484.1 CDS BCAS0091 NC_011002.1 98678 99403 R putative pirin family protein complement(98678..99403) Burkholderia cenocepacia J2315 6803992 YP_002153485.1 CDS BCAS0092 NC_011002.1 99521 100447 D LysR family regulatory protein 99521..100447 Burkholderia cenocepacia J2315 6804667 YP_002153486.1 CDS BCAS0093 NC_011002.1 100538 101662 D putative Fic family protein 100538..101662 Burkholderia cenocepacia J2315 6804668 YP_002153487.1 CDS BCAS0094 NC_011002.1 101895 102092 D hypothetical protein 101895..102092 Burkholderia cenocepacia J2315 6804669 YP_002153488.1 CDS BCAS0095 NC_011002.1 102175 103569 D putative sodium:solute symporter family protein 102175..103569 Burkholderia cenocepacia J2315 6804670 YP_002153489.1 CDS BCAS0096 NC_011002.1 103591 105258 D amidohydrolase family protein 103591..105258 Burkholderia cenocepacia J2315 6804671 YP_002153490.1 CDS BCAS0097 NC_011002.1 105282 106283 D putative cobalamin synthesis protein 105282..106283 Burkholderia cenocepacia J2315 6804672 YP_002153491.1 CDS BCAS0098 NC_011002.1 106439 107485 D hypothetical protein 106439..107485 Burkholderia cenocepacia J2315 6804673 YP_002153492.1 CDS BCAS0099 NC_011002.1 107501 108592 R LacI family regulatory protein complement(107501..108592) Burkholderia cenocepacia J2315 6804674 YP_002153493.1 CDS BCAS0100 NC_011002.1 108827 109759 D putative ribokinase 108827..109759 Burkholderia cenocepacia J2315 6804675 YP_002153494.1 CDS BCAS0101 NC_011002.1 109805 111139 D Similar to Ralstonia solanacearum ExuT exuT SWALL:Q93AS8 (EMBL:AF417111) (439 aa) fasta scores: E(): 1.7e-30, 30.78% id in 445 aa; has N terminal extension; Major Facilitator Superfamily protein 109805..111139 Burkholderia cenocepacia J2315 6804676 YP_002153495.1 CDS BCAS0102 NC_011002.1 111183 112130 D Similar to Agrobacterium tumefaciens dihydrodipicolinate synthase DapA SWALL:Q8UJS7 (EMBL:AE008961) (309 aa) fasta scores: E(): 4.7e-72, 62.91% id in 302 aa. Weakly similar to Bacillus subtilis dihydrodipicolinate synthase DapA SWALL:DAPA_BACSU (SWALL:Q04796) (290 aa) fasta scores: E(): 4.5e-11, 26.66% id in 285 aa; dihydrodipicolinate synthetase family protein 111183..112130 Burkholderia cenocepacia J2315 6804677 YP_002153496.1 CDS BCAS0103 NC_011002.1 112548 113195 D hypothetical protein 112548..113195 Burkholderia cenocepacia J2315 6804678 YP_002153497.1 CDS fliD2 NC_011002.1 113322 114836 R Similar to BCAL0113, 69.136% identity (70.000% ungapped) in 486 aa overlap (1-486:19-498); A-type flagellar hook-associated protein 2 (HAP2) complement(113322..114836) Burkholderia cenocepacia J2315 6804679 YP_002153498.1 CDS BCAS0105 NC_011002.1 115829 116794 D Similar to Porphyromonas gingivalis dtdp-4-dehydrorhamnose reductase rfbD SWALL:Q7MUG2 (EMBL:AE017177) (285 aa) fasta scores: E(): 6.3e-12, 34.09% id in 264 aa; homology doesn't extend to N terminus; putative signal sequence at N terminus; hypothetical protein 115829..116794 Burkholderia cenocepacia J2315 6803975 YP_002153499.1 CDS BCAS0106 NC_011002.1 116934 118331 D hypothetical protein 116934..118331 Burkholderia cenocepacia J2315 6804680 YP_002153500.1 CDS BCAS0107 NC_011002.1 118392 119309 D LysR family regulatory protein 118392..119309 Burkholderia cenocepacia J2315 6804681 YP_002153501.1 CDS BCAS0108 NC_011002.1 119493 120821 D Similar to Klebsiella pneumoniae citrate-proton symporter citH SWALL:CIT1_KLEPN (SWALL:P16482) (444 aa) fasta scores: E(): 1.8e-48, 36.36% id in 407 aa; homology doesn't extend to N terminus; Major Facilitator Superfamily protein 119493..120821 Burkholderia cenocepacia J2315 6804682 YP_002153502.1 CDS BCAS0109 NC_011002.1 120912 121895 D succinylglutamate desuccinylase/aspartoacylase family protein 120912..121895 Burkholderia cenocepacia J2315 6804683 YP_002153503.1 CDS BCAS0110 NC_011002.1 122259 123119 D Similar to Escherichia coli arginine-binding periplasmic protein 2 precursor artJ SWALL:ARTJ_ECOLI (SWALL:P30860) (243 aa) fasta scores: E(): 2.1e-08, 28.09% id in 267 aa; contains additional 24 amino acids in central portion of predicted protein; periplasmic solute-binding protein 122259..123119 Burkholderia cenocepacia J2315 6804684 YP_002153504.1 CDS BCAS0111 NC_011002.1 123212 123934 D putative binding-protein-dependent transport system protein 123212..123934 Burkholderia cenocepacia J2315 6804685 YP_002153505.1 CDS BCAS0112 NC_011002.1 123947 124693 D has 18 amino acid C terminal extension; putative binding-protein-dependent transport system protein 123947..124693 Burkholderia cenocepacia J2315 6804686 YP_002153506.1 CDS BCAS0113 NC_011002.1 124721 125512 D ABC transporter ATP-binding protein 124721..125512 Burkholderia cenocepacia J2315 6804687 YP_002153507.1 CDS BCAS0114 NC_011002.1 125520 127013 D putative histidine ammonia-lyase 125520..127013 Burkholderia cenocepacia J2315 6804688 YP_002153508.1 CDS BCAS0115 NC_011002.1 127064 127819 D possible histidine utilization repressor; GntR family regulatory protein 127064..127819 Burkholderia cenocepacia J2315 6804689 YP_002153509.1 CDS BCAS0116 NC_011002.1 128054 128626 D Osa protein from pSa of Shigella is involved in suppression of oncogenic activity of Agrobacterium tumefaciens; putative Osa protein 128054..128626 Burkholderia cenocepacia J2315 6804690 YP_002153510.1 CDS BCAS0117 NC_011002.1 128790 130229 D Similar to C terminus of Myxococcus xanthus RNA-directed DNA polymerase from retron mx65 SWALL:RT65_MYXXA (SWALL:P23071) (427 aa) fasta scores: E(): 4e-22, 42.73% id in 337 aa; putative reverse transcriptase 128790..130229 Burkholderia cenocepacia J2315 6804691 YP_002153511.1 CDS BCAS0118 NC_011002.1 130555 130884 D putative H-NS family DNA-binding protein 130555..130884 Burkholderia cenocepacia J2315 6804692 YP_002153512.1 CDS BCAS0119 NC_011002.1 131188 132435 D Major Facilitator Superfamily protein 131188..132435 Burkholderia cenocepacia J2315 6804693 YP_002153513.1 CDS BCAS0120 NC_011002.1 132480 133037 D hypothetical protein 132480..133037 Burkholderia cenocepacia J2315 6804694 YP_002153514.1 CDS BCAS0121 NC_011002.1 133250 134338 R putative porin protein complement(133250..134338) Burkholderia cenocepacia J2315 6804695 YP_002153515.1 CDS BCAS0122 NC_011002.1 134527 135921 D putative transporter protein 134527..135921 Burkholderia cenocepacia J2315 6804696 YP_002153516.1 CDS BCAS0123 NC_011002.1 135937 136776 D Similar to Pseudomonas putida pca regulon regulatory protein pcaR SWALL:PCAR_PSEPU (SWALL:Q52154) (291 aa) fasta scores: E(): 1.8e-15, 28.06% id in 253 aa; N terminus is slightly truncated; putative transcriptional regulator 135937..136776 Burkholderia cenocepacia J2315 6804697 YP_002153517.1 CDS BCAS0124 NC_011002.1 136814 137920 R putative putrescine-binding periplasmic protein precursor complement(136814..137920) Burkholderia cenocepacia J2315 6804698 YP_002153518.1 CDS BCAS0125 NC_011002.1 138751 139479 R Contains 3 pentapeptide repeat units; hypothetical protein complement(138751..139479) Burkholderia cenocepacia J2315 6804699 YP_002153519.1 CDS BCAS0126 NC_011002.1 139573 140553 R MarR family regulatory protein/acetyltransferase complement(139573..140553) Burkholderia cenocepacia J2315 6804700 YP_002153520.1 CDS BCAS0127 NC_011002.1 140798 141175 D contains predicted signal peptide; hypothetical protein 140798..141175 Burkholderia cenocepacia J2315 6804701 YP_002153521.1 CDS BCAS0128 NC_011002.1 141257 142432 R also contains 2 CBS domains; ABC transporter ATP-binding protein complement(141257..142432) Burkholderia cenocepacia J2315 6804702 YP_002153522.1 CDS BCAS0129 NC_011002.1 142429 143082 R putative binding-protein-dependent transport system protein complement(142429..143082) Burkholderia cenocepacia J2315 6804703 YP_002153523.1 CDS BCAS0130 NC_011002.1 143093 144004 R putative ABC transporter substrate-binding protein complement(143093..144004) Burkholderia cenocepacia J2315 6804704 YP_002153524.1 CDS BCAS0131 NC_011002.1 144001 144717 R Similar to Bacillus subtilis choline transport system permease protein OpubB opubB SWALL:OPBB_BACSU (SWALL:Q45461) (217 aa) fasta scores: E(): 2e-20, 40.62% id in 192 aa; has N terminal extension of 25 amino acids; putative binding-protein-dependent transport system protein complement(144001..144717) Burkholderia cenocepacia J2315 6804705 YP_002153525.1 CDS BCAS0132 NC_011002.1 145281 146210 R putative amidinohydrolase complement(145281..146210) Burkholderia cenocepacia J2315 6804706 YP_002153526.1 CDS BCAS0133 NC_011002.1 146259 147560 R putative transporter protein complement(146259..147560) Burkholderia cenocepacia J2315 6804707 YP_002153527.1 CDS BCAS0134 NC_011002.1 147724 148674 D LysR family regulatory protein 147724..148674 Burkholderia cenocepacia J2315 6804708 YP_002153528.1 CDS BCAS0135 NC_011002.1 148685 149779 R AraC family regulatory protein complement(148685..149779) Burkholderia cenocepacia J2315 6804709 YP_002153529.1 CDS BCAS0136 NC_011002.1 150031 151419 D putative amino acid permease 150031..151419 Burkholderia cenocepacia J2315 6804710 YP_002153530.1 CDS BCAS0137 NC_011002.1 151470 152867 D hypothetical protein 151470..152867 Burkholderia cenocepacia J2315 6804711 YP_002153531.1 CDS BCAS0138 NC_011002.1 152898 154337 D putative aldehyde dehydrogenase 152898..154337 Burkholderia cenocepacia J2315 6804712 YP_002153532.1 CDS BCAS0139 NC_011002.1 154416 155273 R Similar to Escherichia coli, and Shigella flexneri transcriptional regulator NanR nanR SWALL:NANR_ECOLI (SWALL:P45427) (263 aa) fasta scores: E(): 1.3e-05, 24.37% id in 238 aa; slight N terminal truncation; GntR family regulatory protein complement(154416..155273) Burkholderia cenocepacia J2315 6804713 YP_002153533.1 CDS BCAS0140 NC_011002.1 155503 156711 D hypothetical protein 155503..156711 Burkholderia cenocepacia J2315 6804714 YP_002153534.1 CDS BCAS0141 NC_011002.1 156782 157642 D putative transport system protein 156782..157642 Burkholderia cenocepacia J2315 6804715 YP_002153535.1 CDS BCAS0142 NC_011002.1 157639 158682 D Similar to Pseudomonas putida branched-chain amino acid ABC transporter, permease protein SWALL:Q88Q78 (EMBL:AE016776) (339 aa) fasta scores: E(): 3.3e-64, 58.8% id in 318 aa; has N terminal extension; putative amino-acid transport system protein 157639..158682 Burkholderia cenocepacia J2315 6804716 YP_002153536.1 CDS BCAS0143 NC_011002.1 158679 159446 D ABC transporter ATP-binding protein 158679..159446 Burkholderia cenocepacia J2315 6804717 YP_002153537.1 CDS BCAS0144 NC_011002.1 159446 160144 D ABC transporter ATP-binding protein 159446..160144 Burkholderia cenocepacia J2315 6804718 YP_002153538.1 CDS BCAS0145 NC_011002.1 160179 161468 D Similar to Bacillus stearothermophilus N-carbamoyl-L-amino acid hydrolase amaB SWALL:AMB2_BACST (SWALL:Q53389) (409 aa) fasta scores: E(): 2.9e-42, 37.12% id in 404 aa; has 15 amino acid N terminal extension; family M20 unassigned metallo peptidase; metallo peptidase 160179..161468 Burkholderia cenocepacia J2315 6804719 YP_002153539.1 CDS BCAS0146 NC_011002.1 161465 162967 D putative MlrC family protein 161465..162967 Burkholderia cenocepacia J2315 6804720 YP_002153540.1 CDS BCAS0147 NC_011002.1 163095 164282 D hypothetical protein 163095..164282 Burkholderia cenocepacia J2315 6804721 YP_002153541.1 CDS BCAS0148 NC_011002.1 164724 167432 D hypothetical protein 164724..167432 Burkholderia cenocepacia J2315 6804722 YP_002153542.1 CDS BCAS0150 NC_011002.1 167756 167890 R hypothetical protein complement(167756..167890) Burkholderia cenocepacia J2315 6804723 YP_002153543.1 CDS BCAS0151 NC_011002.1 168303 168779 D no significant database hits; hypothetical protein 168303..168779 Burkholderia cenocepacia J2315 6804724 YP_002153544.1 CDS BCAS0152 NC_011002.1 168852 169661 D family S33 serine peptidase; putative hydrolase 168852..169661 Burkholderia cenocepacia J2315 6804725 YP_002153545.1 CDS BCAS0153 NC_011002.1 169708 171714 R hypothetical protein complement(169708..171714) Burkholderia cenocepacia J2315 6804726 YP_002153546.1 CDS BCAS0154 NC_011002.1 171711 172493 R Similar to Salmonella typhi hypothetical protein sty2347 SWALL:Q8Z5F0 (EMBL:AL627273) (235 aa) fasta scores: E(): 4.6e-36, 53.36% id in 193 aa; homology doesn't extend to N terminus; hypothetical protein complement(171711..172493) Burkholderia cenocepacia J2315 6804727 YP_002153547.1 CDS BCAS0155 NC_011002.1 172487 173794 R hypothetical protein complement(172487..173794) Burkholderia cenocepacia J2315 6804728 YP_002153548.1 CDS ampC NC_011002.1 174406 175575 D family S12 serine peptidase; beta-lactamase 174406..175575 Burkholderia cenocepacia J2315 6804729 YP_002153549.1 CDS BCAS0157 NC_011002.1 175667 176329 D hypothetical protein 175667..176329 Burkholderia cenocepacia J2315 6804598 YP_002153550.1 CDS BCAS0158 NC_011002.1 176537 176881 R hypothetical protein complement(176537..176881) Burkholderia cenocepacia J2315 6804730 YP_002153551.1 CDS BCAS0159 NC_011002.1 177212 178231 D putative dehydrogenase 177212..178231 Burkholderia cenocepacia J2315 6804731 YP_002153552.1 CDS BCAS0160 NC_011002.1 178249 178665 D hypothetical protein 178249..178665 Burkholderia cenocepacia J2315 6804732 YP_002153553.1 CDS BCAS0161 NC_011002.1 178890 179801 R LysR family regulatory protein complement(178890..179801) Burkholderia cenocepacia J2315 6804733 YP_002153554.1 CDS BCAS0162 NC_011002.1 179939 180721 R periplasmic solute-binding protein complement(179939..180721) Burkholderia cenocepacia J2315 6804734 YP_002153555.1 CDS BCAS0163 NC_011002.1 180762 182198 R putative pyridine nucleotide-disulphide oxidoreductase complement(180762..182198) Burkholderia cenocepacia J2315 6804735 YP_002153556.1 CDS BCAS0164 NC_011002.1 182195 182494 R hypothetical protein complement(182195..182494) Burkholderia cenocepacia J2315 6804736 YP_002153557.1 CDS BCAS0165 NC_011002.1 182487 183605 R putative FAD dependent oxidoreductase complement(182487..183605) Burkholderia cenocepacia J2315 6804737 YP_002153558.1 CDS BCAS0166 NC_011002.1 183761 184675 D LysR family regulatory protein 183761..184675 Burkholderia cenocepacia J2315 6804738 YP_002153559.1 CDS shc NC_011002.1 184743 186782 R squalene-hopene cyclase complement(184743..186782) Burkholderia cenocepacia J2315 6804739 YP_002153560.1 CDS BCAS0168 NC_011002.1 186955 187521 D TetR family regulatory protein 186955..187521 Burkholderia cenocepacia J2315 6803991 YP_002153561.1 CDS BCAS0169 NC_011002.1 187719 188627 R LysR family regulatory protein complement(187719..188627) Burkholderia cenocepacia J2315 6804740 YP_002153562.1 CDS BCAS0170 NC_011002.1 188758 189168 D hypothetical protein 188758..189168 Burkholderia cenocepacia J2315 6804741 YP_002153563.1 CDS BCAS0171 NC_011002.1 189318 190091 D putative carboxymuconolactone decarboxylase 189318..190091 Burkholderia cenocepacia J2315 6804742 YP_002153564.1 CDS BCAS0172 NC_011002.1 190120 190857 D putative dehydrogenase 190120..190857 Burkholderia cenocepacia J2315 6804743 YP_002153565.1 CDS BCAS0173 NC_011002.1 190906 191133 D putative tautomerase 190906..191133 Burkholderia cenocepacia J2315 6804744 YP_002153566.1 CDS BCAS0174 NC_011002.1 191421 191786 R hypothetical protein complement(191421..191786) Burkholderia cenocepacia J2315 6804745 YP_002153567.1 CDS BCAS0175 NC_011002.1 191783 192730 R family S33 serine peptidase; putative hydrolase complement(191783..192730) Burkholderia cenocepacia J2315 6804746 YP_002153568.1 CDS BCAS0176 NC_011002.1 192780 193673 R LysR family regulatory protein complement(192780..193673) Burkholderia cenocepacia J2315 6804747 YP_002153569.1 CDS BCAS0177 NC_011002.1 193841 194371 D hypothetical protein 193841..194371 Burkholderia cenocepacia J2315 6804748 YP_002153570.1 CDS BCAS0178 NC_011002.1 194364 194690 D hypothetical protein 194364..194690 Burkholderia cenocepacia J2315 6804082 YP_002153571.1 CDS BCAS0179 NC_011002.1 194709 195554 D metallo-beta-lactamase superfamily protein 194709..195554 Burkholderia cenocepacia J2315 6804083 YP_002153572.1 CDS BCAS0181 NC_011002.1 196258 197823 D Similar to Escherichia coli methyl-accepting chemotaxis protein i tsR SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 2.6e-52, 44.72% id in 474 aa; homology doesn't extend to N terminus; putative methyl-accepting chemotaxis protein 196258..197823 Burkholderia cenocepacia J2315 6804085 YP_002153573.1 CDS BCAS0182 NC_011002.1 197833 198240 R hypothetical protein complement(197833..198240) Burkholderia cenocepacia J2315 6804086 YP_002153574.1 CDS BCAS0183 NC_011002.1 198480 199397 D hypothetical protein 198480..199397 Burkholderia cenocepacia J2315 6804087 YP_002153575.1 CDS BCAS0184 NC_011002.1 199441 200691 D putative saccharopine dehydrogenase 199441..200691 Burkholderia cenocepacia J2315 6804088 YP_002153576.1 CDS BCAS0185 NC_011002.1 200774 201655 R LysR family regulatory protein complement(200774..201655) Burkholderia cenocepacia J2315 6804089 YP_002153577.1 CDS BCAS0186 NC_011002.1 201784 202413 D putative acyl carrier protein phosphodiesterase 201784..202413 Burkholderia cenocepacia J2315 6804090 YP_002153578.1 CDS BCAS0187 NC_011002.1 202448 203065 R putative amino acid efflux protein-LysE family complement(202448..203065) Burkholderia cenocepacia J2315 6804091 YP_002153579.1 CDS BCAS0188 NC_011002.1 203133 204056 D LysR family regulatory protein 203133..204056 Burkholderia cenocepacia J2315 6804092 YP_002153580.1 CDS BCAS0188A NC_011002.1 204155 204418 R hypothetical protein complement(204155..204418) Burkholderia cenocepacia J2315 6804093 YP_002153581.1 CDS BCAS0189 NC_011002.1 204956 205288 D hypothetical protein 204956..205288 Burkholderia cenocepacia J2315 6804094 YP_002153582.1 CDS BCAS0190 NC_011002.1 205461 205760 R putative H-NS family DNA-binding protein complement(205461..205760) Burkholderia cenocepacia J2315 6804095 YP_002153583.1 CDS BCAS0191 NC_011002.1 205989 206477 D putative endoribonuclease 205989..206477 Burkholderia cenocepacia J2315 6804096 YP_002153584.1 CDS BCAS0192 NC_011002.1 206519 207508 R AraC family regulatory protein complement(206519..207508) Burkholderia cenocepacia J2315 6804097 YP_002153585.1 CDS BCAS0193 NC_011002.1 207505 208563 R putative dehydrogenase complement(207505..208563) Burkholderia cenocepacia J2315 6804098 YP_002153586.1 CDS BCAS0194 NC_011002.1 209303 209554 D hypothetical protein 209303..209554 Burkholderia cenocepacia J2315 6804099 YP_002153587.1 CDS BCAS0195 NC_011002.1 209865 210956 D Similar to Comamonas testosteroni TeiR teiR SWALL:Q6URL0 (EMBL:AY363220) (391 aa) fasta scores: E(): 3.5e-06, 26.16% id in 386 aa; slight truncation at N terminus; putative transcriptional regulator 209865..210956 Burkholderia cenocepacia J2315 6804100 YP_002153588.1 CDS BCAS0196 NC_011002.1 211277 213454 R Similar to Agrobacterium vitis endo-polygalacturonase precursor pehA SWALL:P77818 (EMBL:U73161) (549 aa) fasta scores: E(): 1.3e-09, 31.85% id in 700 aa; putative polygalacturonase complement(211277..213454) Burkholderia cenocepacia J2315 6804101 YP_002153589.1 CDS BCAS0197 NC_011002.1 214032 215018 D putative periplasmic solute-binding protein 214032..215018 Burkholderia cenocepacia J2315 6804102 YP_002153590.1 CDS BCAS0198 NC_011002.1 215015 215587 D has homology to DctQ component of Tripartite ATP-independent periplasmic (TRAP) transporters; putative transporter protein 215015..215587 Burkholderia cenocepacia J2315 6804103 YP_002153591.1 CDS BCAS0199 NC_011002.1 215592 216944 D putative transporter protein-Dct family 215592..216944 Burkholderia cenocepacia J2315 6804104 YP_002153592.1 CDS BCAS0201 NC_011002.1 217322 218740 R putative FAD dependent oxidoreductase complement(217322..218740) Burkholderia cenocepacia J2315 6804105 YP_002153593.1 CDS BCAS0202 NC_011002.1 218743 219285 R hypothetical protein complement(218743..219285) Burkholderia cenocepacia J2315 6804106 YP_002153594.1 CDS BCAS0203 NC_011002.1 219323 220402 R ABC transporter protein complement(219323..220402) Burkholderia cenocepacia J2315 6804107 YP_002153595.1 CDS BCAS0204 NC_011002.1 220395 221417 R ABC transporter ATP-binding protein complement(220395..221417) Burkholderia cenocepacia J2315 6804108 YP_002153596.1 CDS BCAS0205 NC_011002.1 221420 222484 R TauD/TfdA taurine catabolism dioxygenase family protein complement(221420..222484) Burkholderia cenocepacia J2315 6804109 YP_002153597.1 CDS BCAS0206 NC_011002.1 222488 223150 R putative methyltransferase family protein complement(222488..223150) Burkholderia cenocepacia J2315 6804110 YP_002153598.1 CDS BCAS0207 NC_011002.1 223180 224424 R hypothetical protein complement(223180..224424) Burkholderia cenocepacia J2315 6804111 YP_002153599.1 CDS BCAS0208 NC_011002.1 224426 226276 R putative acyl-CoA dehydrogenase complement(224426..226276) Burkholderia cenocepacia J2315 6804112 YP_002153600.1 CDS BCAS0209 NC_011002.1 226276 227367 R hypothetical protein complement(226276..227367) Burkholderia cenocepacia J2315 6804113 YP_002153601.1 CDS BCAS0210 NC_011002.1 227364 228947 R putative AMP-binding enzyme complement(227364..228947) Burkholderia cenocepacia J2315 6804114 YP_002153602.1 CDS BCAS0211 NC_011002.1 228964 230139 R putative pyridoxal-dependent decarboxylase complement(228964..230139) Burkholderia cenocepacia J2315 6804115 YP_002153603.1 CDS BCAS0212 NC_011002.1 230129 231112 R hypothetical protein complement(230129..231112) Burkholderia cenocepacia J2315 6804116 YP_002153604.1 CDS BCAS0213 NC_011002.1 231116 232099 R hypothetical protein complement(231116..232099) Burkholderia cenocepacia J2315 6804117 YP_002153605.1 CDS BCAS0214 NC_011002.1 232101 232730 R hypothetical protein complement(232101..232730) Burkholderia cenocepacia J2315 6804118 YP_002153606.1 CDS BCAS0215 NC_011002.1 232732 233607 R hypothetical protein complement(232732..233607) Burkholderia cenocepacia J2315 6804119 YP_002153607.1 CDS BCAS0216 NC_011002.1 233615 233869 R putative acyl carrier protein complement(233615..233869) Burkholderia cenocepacia J2315 6804120 YP_002153608.1 CDS BCAS0217 NC_011002.1 233928 235013 R hypothetical protein complement(233928..235013) Burkholderia cenocepacia J2315 6804121 YP_002153609.1 CDS BCAS0218 NC_011002.1 235027 236355 R no significant database hits; hypothetical protein complement(235027..236355) Burkholderia cenocepacia J2315 6804122 YP_002153610.1 CDS BCAS0219 NC_011002.1 236345 237088 R hypothetical protein complement(236345..237088) Burkholderia cenocepacia J2315 6804123 YP_002153611.1 CDS BCAS0220 NC_011002.1 237085 238302 R putative permease complement(237085..238302) Burkholderia cenocepacia J2315 6804124 YP_002153612.1 CDS afcA NC_011002.1 238980 240743 R Probably involved in production of an antifungal agent; putative AMP-dependent synthetase complement(238980..240743) Burkholderia cenocepacia J2315 6804595 YP_002153613.1 CDS BCAS0223 NC_011002.1 241076 242071 D Probably involved in production of an antifungal agent; putative fatty acid desaturase 241076..242071 Burkholderia cenocepacia J2315 6804594 YP_002153614.1 CDS afcD NC_011002.1 242104 242955 D Possibly involved in production of an antifungal agent; hypothetical protein 242104..242955 Burkholderia cenocepacia J2315 6804126 YP_002153615.1 CDS BCAS0225 NC_011002.1 243574 244566 D LysR family regulatory protein 243574..244566 Burkholderia cenocepacia J2315 6804596 YP_002153616.1 CDS BCAS0226 NC_011002.1 244715 245539 D family S33 serine peptidase; putative hydrolase 244715..245539 Burkholderia cenocepacia J2315 6804127 YP_002153617.1 CDS BCAS0227 NC_011002.1 245595 247064 R putative proline/betaine transporter complement(245595..247064) Burkholderia cenocepacia J2315 6804128 YP_002153618.1 CDS BCAS0228 NC_011002.1 247338 248366 R hypothetical protein complement(247338..248366) Burkholderia cenocepacia J2315 6804129 YP_002153619.1 CDS BCAS0229 NC_011002.1 248740 249702 D putative periplasmic sugar-binding protein 248740..249702 Burkholderia cenocepacia J2315 6804130 YP_002153620.1 CDS BCAS0230 NC_011002.1 249763 251277 D putative sugar ABC transporter ATP-binding protein 249763..251277 Burkholderia cenocepacia J2315 6804131 YP_002153621.1 CDS BCAS0231 NC_011002.1 251274 252317 D Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribose transport system permease protein RbsC rbsC SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 1.8e-23, 37.45% id in 307 aa; has C terminal extension; putative transport system protein 251274..252317 Burkholderia cenocepacia J2315 6804132 YP_002153622.1 CDS BCAS0232 NC_011002.1 252314 253402 D membrane component of a putative sugar ABC transporter system; inner membrane ABC transporter permease protein YjfF 252314..253402 Burkholderia cenocepacia J2315 6804133 YP_002153623.1 CDS BCAS0233 NC_011002.1 253437 253724 D no significant database hits; hypothetical protein 253437..253724 Burkholderia cenocepacia J2315 6804134 YP_002153624.1 CDS BCAS0234 NC_011002.1 253744 256044 R Central portion similar to central portion of Escherichia coli, and Shigella flexneri aerobic respiration control sensor protein ArcB arcB SWALL:ARCB_ECOLI (SWALL:P22763) (778 aa) fasta scores: E(): 1.2e-18, 34.48% id in 261 aa; hybrid two-component system kinase-response regulator protein complement(253744..256044) Burkholderia cenocepacia J2315 6804135 YP_002153625.1 CDS BCAS0235 NC_011002.1 256079 256912 R Similar to C terminus of Bacteroides thetaiotaomicron two-component system sensor histidine kinase/response regulator, hybrid SWALL:Q8AB44 (EMBL:AE016926) (1370 aa) fasta scores: E(): 2.6e-17, 32.66% id in 251 aa; two-component regulatory system, response regulator protein complement(256079..256912) Burkholderia cenocepacia J2315 6804136 YP_002153626.1 CDS BCAS0236 NC_011002.1 258387 262877 D Contains many weak matches to Hep_Hag repeat of bacterial haemagglutinins. Possible pseudogene. CDS lacks predicted N-terminal signal sequence, therefore it is known if this protein will be correctly processed; putative haemagglutinin-related autotransporter protein 258387..262877 Burkholderia cenocepacia J2315 6804137 YP_002153627.1 CDS BCAS0237 NC_011002.1 263002 263664 D C terminus similar to C terminus of Bordetella avium outer membrane protein a precursor ompA SWALL:OMPA_BORAV (SWALL:Q05146) (194 aa) fasta scores: E(): 8.8e-10, 36.11% id in 144 aa; putative outer membrane protein 263002..263664 Burkholderia cenocepacia J2315 6804138 YP_002153628.1 CDS BCAS0238 NC_011002.1 263868 264053 R hypothetical protein complement(263868..264053) Burkholderia cenocepacia J2315 6804139 YP_002153629.1 CDS BCAS0238A NC_011002.1 264216 264431 D hypothetical protein 264216..264431 Burkholderia cenocepacia J2315 6804140 YP_002153630.1 CDS BCAS0239 NC_011002.1 264708 270602 D C terminus similar (with gaps) to Thermus thermophilus UvrAbc system protein a uvrA SWALL:UVRA_THETH (SWALL:Q56242) (952 aa) fasta scores: E(): 5.4e-32, 43.78% id in 1014 aa; putative excinuclease ABC subunit A family protein 264708..270602 Burkholderia cenocepacia J2315 6804141 YP_002153631.1 CDS BCAS0240 NC_011002.1 270683 271624 R periplasmic solute-binding protein complement(270683..271624) Burkholderia cenocepacia J2315 6804142 YP_002153632.1 CDS BCAS0241 NC_011002.1 271638 272945 R putative sodium:dicarboxylate symporter family protein complement(271638..272945) Burkholderia cenocepacia J2315 6804143 YP_002153633.1 CDS BCAS0242 NC_011002.1 273316 274050 R hypothetical protein complement(273316..274050) Burkholderia cenocepacia J2315 6804144 YP_002153634.1 CDS BCAS0243 NC_011002.1 274152 274448 D hypothetical protein 274152..274448 Burkholderia cenocepacia J2315 6804145 YP_002153635.1 CDS BCAS0244 NC_011002.1 274432 274638 R no significant database hits; hypothetical protein complement(274432..274638) Burkholderia cenocepacia J2315 6804146 YP_002153636.1 CDS rpsU NC_011002.1 274648 274860 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(274648..274860) Burkholderia cenocepacia J2315 6804147 YP_002153637.1 CDS BCAS0245A NC_011002.1 274896 275105 R no significant database hits; hypothetical protein complement(274896..275105) Burkholderia cenocepacia J2315 6803989 YP_002153638.1 CDS BCAS0246 NC_011002.1 275153 275473 R hypothetical protein complement(275153..275473) Burkholderia cenocepacia J2315 6804148 YP_002153639.1 CDS BCAS0247 NC_011002.1 275698 276027 R no significant database hits; hypothetical protein complement(275698..276027) Burkholderia cenocepacia J2315 6804149 YP_002153640.1 CDS chrB NC_011002.1 276317 277279 D chromate resistance exported protein 276317..277279 Burkholderia cenocepacia J2315 6804150 YP_002153641.1 CDS chrA NC_011002.1 277299 278471 D chromate resistance transport protein 277299..278471 Burkholderia cenocepacia J2315 6804250 YP_002153642.1 CDS BCAS0250 NC_011002.1 278486 278947 D hypothetical protein 278486..278947 Burkholderia cenocepacia J2315 6804079 YP_002153643.1 CDS BCAS0251 NC_011002.1 279266 280423 R putative lipoprotein complement(279266..280423) Burkholderia cenocepacia J2315 6804151 YP_002153644.1 CDS BCAS0252 NC_011002.1 280855 281454 D DJ-1/PfpI family protein 280855..281454 Burkholderia cenocepacia J2315 6804152 YP_002153645.1 CDS BCAS0253 NC_011002.1 281590 282486 R 2-dehydropantoate 2-reductase complement(281590..282486) Burkholderia cenocepacia J2315 6804153 YP_002153646.1 CDS BCAS0254 NC_011002.1 282483 283706 R Similar to Bradyrhizobium japonicum blr0485 protein SWALL:Q89X37 (EMBL:BA000040) (407 aa) fasta scores: E(): 1.3e-78, 63.46% id in 364 aa; possible 44 amino acid truncation of N terminus; Major Facilitator Superfamily protein complement(282483..283706) Burkholderia cenocepacia J2315 6804154 YP_002153647.1 CDS BCAS0255 NC_011002.1 283845 284777 D LysR family regulatory protein 283845..284777 Burkholderia cenocepacia J2315 6804155 YP_002153648.1 CDS BCAS0256 NC_011002.1 284876 286042 R putative porin protein complement(284876..286042) Burkholderia cenocepacia J2315 6804156 YP_002153649.1 CDS BCAS0257 NC_011002.1 286886 287350 R putative acetyltransferase complement(286886..287350) Burkholderia cenocepacia J2315 6804157 YP_002153650.1 CDS BCAS0258 NC_011002.1 287501 288163 D GntR family regulatory protein 287501..288163 Burkholderia cenocepacia J2315 6804158 YP_002153651.1 CDS BCAS0259 NC_011002.1 288147 289385 D putative sodium:dicarboxylate symporter family protein 288147..289385 Burkholderia cenocepacia J2315 6804159 YP_002153652.1 CDS BCAS0260 NC_011002.1 289562 289963 D no significant database hits; hypothetical protein 289562..289963 Burkholderia cenocepacia J2315 6804160 YP_002153653.1 CDS BCAS0262 NC_011002.1 290364 290813 D putative acetyltransferase 290364..290813 Burkholderia cenocepacia J2315 6804161 YP_002153654.1 CDS BCAS0263 NC_011002.1 290995 292347 D N terminus similar to N terminus of Rhodobacter capsulatus hydrogenase transcriptional regulatory protein Hupr1 hupr1 SWALL:HUPR_RHOCA (SWALL:P26408) (492 aa) fasta scores: E(): 9.9e-15, 32.11% id in 246 aa; contains response regulator domain and HD domain; two-component regulatory system, response regulator protein 290995..292347 Burkholderia cenocepacia J2315 6804162 YP_002153655.1 CDS BCAS0264 NC_011002.1 292435 294204 D C terminus similar to C terminus of Rhodobacter sphaeroides hydrogen uptake histidine-kinase hupT SWALL:Q53162 (EMBL:L37195) (443 aa) fasta scores: E(): 1.6e-22, 33.98% id in 356 aa; two-component regulatory system, sensor kinase protein 292435..294204 Burkholderia cenocepacia J2315 6804163 YP_002153656.1 CDS BCAS0265 NC_011002.1 294252 295367 R subfamily S9C non-peptidase homologue complement(294252..295367) Burkholderia cenocepacia J2315 6804164 YP_002153657.1 CDS BCAS0266 NC_011002.1 295763 296884 D two-component regulatory system, sensor kinase protein 295763..296884 Burkholderia cenocepacia J2315 6804081 YP_002153658.1 CDS BCAS0267a NC_011002.1 297147 297947 D Similar to Escherichia coli, and Escherichia coli O157:H7 IcC protein icC SWALL:ICC_ECOLI (SWALL:P36650) (275 aa) fasta scores: E(): 1.6e-16, 31.33% id in 217 aa; homology does not extend to C terminus; putative calcineurin-like phosphoesterase family protein 297147..297947 Burkholderia cenocepacia J2315 6804167 YP_002153659.1 CDS BCAS0269 NC_011002.1 298090 299112 R hypothetical protein complement(298090..299112) Burkholderia cenocepacia J2315 6804168 YP_002153660.1 CDS BCAS0270 NC_011002.1 299995 300750 D hypothetical protein 299995..300750 Burkholderia cenocepacia J2315 6804601 YP_002153661.1 CDS BCAS0271 NC_011002.1 300747 301418 D hypothetical protein 300747..301418 Burkholderia cenocepacia J2315 6804170 YP_002153662.1 CDS BCAS0272 NC_011002.1 301507 305127 D Similar to the C-terminal region of Saccharomyces cerevisiae (baker's yeast) Urea amidolyase Dur1,2 UniProt:P32528 (EMBL:M64926 (1835 aa) fasta scores: E()=2.4e-147, 44.399% id in 1214 aa; urea amidolyase urea carboxylase subunit 301507..305127 Burkholderia cenocepacia J2315 6804171 YP_002153663.1 CDS BCAS0273 NC_011002.1 305124 306995 D Similar to the N-terminal region of Saccharomyces cerevisiae (baker's yeast) urea amidolyase DUR1,2 UniProt:P32528 (EMBL:M64926 (1835 aa) fasta scores: E()=1.8e-57, 41.426% id in 589 aa; urea amidolyase allophanate hydrolase subunit 305124..306995 Burkholderia cenocepacia J2315 6804172 YP_002153664.1 CDS BCAS0274 NC_011002.1 307060 308034 D C terminus is similar to C terminus of Escherichia coli taurine transport system permease protein TauC tauC SWALL:TAUC_ECOLI (SWALL:Q47539) (275 aa) fasta scores: E(): 9.4e-17, 30.83% id in 227 aa; putative binding-protein-dependent transport system protein 307060..308034 Burkholderia cenocepacia J2315 6804173 YP_002153665.1 CDS BCAS0275 NC_011002.1 308080 308991 D Similar to Synechococcus sp. nitrate transport ATP-binding protein NrtD SWALL:NRTD_SYNP7 (SWALL:P38046) (274 aa) fasta scores: E(): 3.8e-38, 45.88% id in 255 aa; homology does not extend to N terminus; ABC transporter ATP-binding protein 308080..308991 Burkholderia cenocepacia J2315 6804174 YP_002153666.1 CDS BCAS0276 NC_011002.1 309200 309937 D Similar to Bordetella bronchiseptica putative extracellular solute-binding protein SWALL:Q7WKE7 (EMBL:BX640443) (306 aa) fasta scores: E(): 5e-23, 33.61% id in 241 aa; N terminus truncated by approx 50 amino acids; hypothetical protein 309200..309937 Burkholderia cenocepacia J2315 6804175 YP_002153667.1 CDS BCAS0277 NC_011002.1 310195 311643 R putative aldehyde dehydrogenase complement(310195..311643) Burkholderia cenocepacia J2315 6804176 YP_002153668.1 CDS BCAS0278 NC_011002.1 311647 312750 R tartrate dehydrogenase complement(311647..312750) Burkholderia cenocepacia J2315 6804177 YP_002153669.1 CDS BCAS0279 NC_011002.1 313047 313967 R LysR family regulatory protein complement(313047..313967) Burkholderia cenocepacia J2315 6804178 YP_002153670.1 CDS BCAS0280 NC_011002.1 314333 315661 D Major Facilitator Superfamily protein 314333..315661 Burkholderia cenocepacia J2315 6804179 YP_002153671.1 CDS BCAS0281 NC_011002.1 315718 316620 D putative 2-hydroxy-3-oxopropionate reductase 315718..316620 Burkholderia cenocepacia J2315 6804180 YP_002153672.1 CDS BCAS0282 NC_011002.1 316726 316959 D no significant database hits; hypothetical protein 316726..316959 Burkholderia cenocepacia J2315 6804181 YP_002153673.1 CDS BCAS0283 NC_011002.1 317110 318003 R LysR family regulatory protein complement(317110..318003) Burkholderia cenocepacia J2315 6804182 YP_002153674.1 CDS BCAS0284 NC_011002.1 318099 319295 D Major Facilitator Superfamily protein 318099..319295 Burkholderia cenocepacia J2315 6804183 YP_002153675.1 CDS BCAS0285 NC_011002.1 319279 320487 R hypothetical protein complement(319279..320487) Burkholderia cenocepacia J2315 6804184 YP_002153676.1 CDS BCAS0286 NC_011002.1 320525 321469 R hypothetical protein complement(320525..321469) Burkholderia cenocepacia J2315 6804185 YP_002153677.1 CDS BCAS0287 NC_011002.1 321636 322511 D LysR family regulatory protein 321636..322511 Burkholderia cenocepacia J2315 6804186 YP_002153678.1 CDS BCAS0288 NC_011002.1 322529 323797 R putative phosphoribosylglycinamide synthetase protein complement(322529..323797) Burkholderia cenocepacia J2315 6804187 YP_002153679.1 CDS BCAS0289 NC_011002.1 323849 325291 R putative multidrug resistance transporter protein complement(323849..325291) Burkholderia cenocepacia J2315 6804188 YP_002153680.1 CDS BCAS0290 NC_011002.1 325697 326818 D Similar to Photorhabdus luminescens similar to putative oxygenase SWALL:Q7N0S8 (EMBL:BX571871) (334 aa) fasta scores: E(): 5.6e-44, 39.26% id in 326 aa; has C terminal extension; hypothetical protein 325697..326818 Burkholderia cenocepacia J2315 6804189 YP_002153681.1 CDS BCAS0291 NC_011002.1 326936 327856 D periplasmic solute-binding protein 326936..327856 Burkholderia cenocepacia J2315 6804190 YP_002153682.1 CDS BCAS0292 NC_011002.1 327929 328468 R hypothetical protein complement(327929..328468) Burkholderia cenocepacia J2315 6804191 YP_002153683.1 CDS aidA NC_011002.1 328534 329037 R Expression of aidA is regulated by the cep quorum sensing system. AidA is involved in killing of C. elegans; nematocidal protein AidA complement(328534..329037) Burkholderia cenocepacia J2315 6804192 YP_002153684.1 CDS BCAS0294 NC_011002.1 329333 329716 R putative GtrA-like family protein complement(329333..329716) Burkholderia cenocepacia J2315 6804597 YP_002153685.1 CDS BCAS0295 NC_011002.1 329730 330773 R glycosyltransferase complement(329730..330773) Burkholderia cenocepacia J2315 6804193 YP_002153686.1 CDS BCAS0296 NC_011002.1 330798 332177 R Similar to Chlorobium tepidum hypothetical protein ct0439 SWALL:Q8KF89 (EMBL:AE012821) (454 aa) fasta scores: E(): 2.6e-43, 36.5% id in 400 aa; homology does not extend to N terminus; hypothetical protein complement(330798..332177) Burkholderia cenocepacia J2315 6804194 YP_002153687.1 CDS BCAS0297 NC_011002.1 332174 333412 R hypothetical protein complement(332174..333412) Burkholderia cenocepacia J2315 6804195 YP_002153688.1 CDS BCAS0298 NC_011002.1 334465 334656 D flp type pilus subunit 334465..334656 Burkholderia cenocepacia J2315 6804196 YP_002153689.1 CDS pilA NC_011002.1 334797 334988 D flp type pilus subunit 334797..334988 Burkholderia cenocepacia J2315 6804197 YP_002153690.1 CDS BCAS0300 NC_011002.1 335071 335289 D flp type pilus subunit 335071..335289 Burkholderia cenocepacia J2315 6803988 YP_002153691.1 CDS BCAS0301 NC_011002.1 335318 335857 D subfamily A24A aspartic peptidase; putative flp type pilus leader peptidase 335318..335857 Burkholderia cenocepacia J2315 6804198 YP_002153692.1 CDS BCAS0302 NC_011002.1 335901 337301 D hypothetical protein 335901..337301 Burkholderia cenocepacia J2315 6804199 YP_002153693.1 CDS BCAS0303 NC_011002.1 337337 338176 D putative flp type pilus assembly protein 337337..338176 Burkholderia cenocepacia J2315 6804200 YP_002153694.1 CDS BCAS0304 NC_011002.1 338281 340215 D Contains domain involved in protein export; flp type pilus assembly protein 338281..340215 Burkholderia cenocepacia J2315 6804201 YP_002153695.1 CDS BCAS0305 NC_011002.1 340236 340532 D putative lipoprotein 340236..340532 Burkholderia cenocepacia J2315 6804202 YP_002153696.1 CDS BCAS0306 NC_011002.1 340558 341829 D hypothetical protein 340558..341829 Burkholderia cenocepacia J2315 6804203 YP_002153697.1 CDS BCAS0307 NC_011002.1 341843 342379 D putative flp type pilus assembly protein 341843..342379 Burkholderia cenocepacia J2315 6804204 YP_002153698.1 CDS BCAS0308 NC_011002.1 342376 342819 D putative flp type pilus assembly protein 342376..342819 Burkholderia cenocepacia J2315 6804205 YP_002153699.1 CDS BCAS0309 NC_011002.1 342842 344050 D flp pilus type assembly-related protein 342842..344050 Burkholderia cenocepacia J2315 6804206 YP_002153700.1 CDS BCAS0310 NC_011002.1 344069 345436 D flp pilus assembly ATPase 344069..345436 Burkholderia cenocepacia J2315 6804207 YP_002153701.1 CDS BCAS0311 NC_011002.1 345472 346449 D contains type II secretion system protein F domain; flp type pilus assembly protein 345472..346449 Burkholderia cenocepacia J2315 6804208 YP_002153702.1 CDS BCAS0312 NC_011002.1 346486 347460 D flp type pilus assembly protein 346486..347460 Burkholderia cenocepacia J2315 6804209 YP_002153703.1 CDS BCAS0313 NC_011002.1 347740 348690 R Similar to C terminus of Pseudomonas resinovorans hypothetical protein Orf9 orf9 SWALL:Q8GI20 (EMBL:AB088420) (567 aa) fasta scores: E(): 4.4e-74, 58.03% id in 305 aa; hypothetical protein complement(347740..348690) Burkholderia cenocepacia J2315 6804210 YP_002153704.1 CDS BCAS0314 NC_011002.1 348727 349254 R Similar to N terminus of Acinetobacter baumannii p-hydroxyphenylacetate hydroxylase c1:reductase component c1-hpaH SWALL:Q6Q271 (EMBL:AY566613) (315 aa) fasta scores: E(): 1.4e-25, 43.86% id in 171 aa; putative reductase complement(348727..349254) Burkholderia cenocepacia J2315 6804211 YP_002153705.1 CDS BCAS0315 NC_011002.1 349260 350498 R hypothetical protein complement(349260..350498) Burkholderia cenocepacia J2315 6804212 YP_002153706.1 CDS BCAS0316 NC_011002.1 350566 351354 R short chain dehydrogenase complement(350566..351354) Burkholderia cenocepacia J2315 6804213 YP_002153707.1 CDS BCAS0317 NC_011002.1 351395 352642 R N terminus is similar to Pseudomonas putida, and Pseudomonas sp. carboxymethylenebutenolidase clcD SWALL:CLCD_PSEPU (SWALL:P11453) (236 aa) fasta scores: E(): 1.8e-22, 36.53% id in 219 aa; dienelactone hydrolase family protein complement(351395..352642) Burkholderia cenocepacia J2315 6804214 YP_002153708.1 CDS BCAS0318 NC_011002.1 352993 354018 D AraC family regulatory protein 352993..354018 Burkholderia cenocepacia J2315 6804215 YP_002153709.1 CDS BCAS0319 NC_011002.1 354215 356707 R may form heterodimer with product of BCAS0320; putative oxidoreductase complement(354215..356707) Burkholderia cenocepacia J2315 6804216 YP_002153710.1 CDS iorA NC_011002.1 356729 357187 R isoquinoline 1-oxidoreductase alpha subunit complement(356729..357187) Burkholderia cenocepacia J2315 6804217 YP_002153711.1 CDS BCAS0321 NC_011002.1 357936 370640 D Similar to central portion of Bombyx mori fibroin heavy chain precursor fibH SWALL:FBOH_BOMMO (SWALL:P05790) (5263 aa) fasta scores: E(): 1e-152, 31.7% id in 3908 aa; hypothetical protein 357936..370640 Burkholderia cenocepacia J2315 6803982 YP_002153712.1 CDS BCAS0321a NC_011002.1 370926 374723 D hypothetical protein 370926..374723 Burkholderia cenocepacia J2315 6804218 YP_002153713.1 CDS BCAS0323 NC_011002.1 375061 376074 R LacI family regulatory protein complement(375061..376074) Burkholderia cenocepacia J2315 6804219 YP_002153714.1 CDS BCAS0324 NC_011002.1 376310 377464 D sugar ABC transporter ATP-binding protein 376310..377464 Burkholderia cenocepacia J2315 6804220 YP_002153715.1 CDS BCAS0325 NC_011002.1 377529 378767 D Similar to uncultured bacterium 582 ABC transporter, substrate-binding protein SWALL:Q6SF77 (EMBL:AY458649) (437 aa) fasta scores: E(): 9.3e-47, 34.39% id in 407 aa; N terminus shorter by 23 amino acids; putative periplasmic solute-binding protein 377529..378767 Burkholderia cenocepacia J2315 6804221 YP_002153716.1 CDS BCAS0326 NC_011002.1 378845 379762 D putative binding-protein-dependent transport system protein 378845..379762 Burkholderia cenocepacia J2315 6804222 YP_002153717.1 CDS BCAS0327 NC_011002.1 379786 380637 D putative binding-protein-dependent transport system protein 379786..380637 Burkholderia cenocepacia J2315 6804223 YP_002153718.1 CDS BCAS0328 NC_011002.1 380674 382644 D beta-galactosidase 380674..382644 Burkholderia cenocepacia J2315 6804224 YP_002153719.1 CDS BCAS0329 NC_011002.1 382649 383938 D putative sugar efflux transporter 382649..383938 Burkholderia cenocepacia J2315 6804225 YP_002153720.1 CDS BCAS0330 NC_011002.1 383982 385163 R Homology does not extend to N terminal signal peptide; putative arabinogalactan endo-1,4-beta-galactosidase complement(383982..385163) Burkholderia cenocepacia J2315 6804226 YP_002153721.1 CDS BCAS0331 NC_011002.1 385447 385617 R hypothetical protein complement(385447..385617) Burkholderia cenocepacia J2315 6804227 YP_002153722.1 CDS BCAS0332 NC_011002.1 385789 386697 R hypothetical protein complement(385789..386697) Burkholderia cenocepacia J2315 6804228 YP_002153723.1 CDS orbA NC_011002.1 386983 389157 D ornibactin receptor precursor 386983..389157 Burkholderia cenocepacia J2315 6804229 YP_002153724.1 CDS BCAS0334 NC_011002.1 389167 389982 R two-component regulatory system, response regulator protein complement(389167..389982) Burkholderia cenocepacia J2315 6803986 YP_002153725.1 CDS BCAS0335 NC_011002.1 391116 394709 D Contains many weak matches to haemagglutinin and Hep_Hag repeats; putative haemagglutinin-related autotransporter protein 391116..394709 Burkholderia cenocepacia J2315 6804230 YP_002153726.1 CDS BCAS0336 NC_011002.1 395058 395465 D putative glutathione transferase 395058..395465 Burkholderia cenocepacia J2315 6804231 YP_002153727.1 CDS BCAS0337 NC_011002.1 395488 396027 R putative lipoprotein complement(395488..396027) Burkholderia cenocepacia J2315 6804232 YP_002153728.1 CDS BCAS0338 NC_011002.1 396137 396523 R Similar to N terminus of Bradyrhizobium sp. nodulation protein NolA nolA SWALL:NOLA_BRASN (SWALL:P50330) (237 aa) fasta scores: E(): 1.2e-07, 37.09% id in 124 aa; MerR family regulatory protein complement(396137..396523) Burkholderia cenocepacia J2315 6804233 YP_002153729.1 CDS BCAS0339 NC_011002.1 396629 397519 D family S33 serine peptidase; putative arylesterase 396629..397519 Burkholderia cenocepacia J2315 6804234 YP_002153730.1 CDS BCAS0340 NC_011002.1 397530 398342 R ABC transporter ATP-binding protein complement(397530..398342) Burkholderia cenocepacia J2315 6804235 YP_002153731.1 CDS BCAS0341 NC_011002.1 398339 399196 R C terminus similar to C terminus of Escherichia coli taurine transport system permease protein TauC tauC SWALL:TAUC_ECOLI (SWALL:Q47539) (275 aa) fasta scores: E(): 6.4e-21, 35.13% id in 222 aa; putative binding-protein-dependent transport system protein complement(398339..399196) Burkholderia cenocepacia J2315 6804236 YP_002153732.1 CDS BCAS0342 NC_011002.1 399208 400200 R hypothetical protein complement(399208..400200) Burkholderia cenocepacia J2315 6804237 YP_002153733.1 CDS BCAS0343 NC_011002.1 400538 401965 D Major Facilitator Superfamily protein 400538..401965 Burkholderia cenocepacia J2315 6804238 YP_002153734.1 CDS BCAS0344 NC_011002.1 402092 403492 R hypothetical protein complement(402092..403492) Burkholderia cenocepacia J2315 6804239 YP_002153735.1 CDS BCAS0345 NC_011002.1 403489 404760 R putative acyl-CoA dehydrogenase protein complement(403489..404760) Burkholderia cenocepacia J2315 6804240 YP_002153736.1 CDS BCAS0346 NC_011002.1 405057 406295 D putative dehydrogenase 405057..406295 Burkholderia cenocepacia J2315 6804241 YP_002153737.1 CDS BCAS0347 NC_011002.1 406299 407126 R Similar to Escherichia coli taurine transport system permease protein TauC tauC SWALL:TAUC_ECOLI (SWALL:Q47539) (275 aa) fasta scores: E(): 7.3e-20, 33.46% id in 245 aa; homology does not extend to N termini; putative binding-protein-dependent transport system protein complement(406299..407126) Burkholderia cenocepacia J2315 6804242 YP_002153738.1 CDS BCAS0348 NC_011002.1 407119 408294 R hypothetical protein complement(407119..408294) Burkholderia cenocepacia J2315 6804243 YP_002153739.1 CDS BCAS0349 NC_011002.1 408321 409115 R ABC transporter ATP-binding protein complement(408321..409115) Burkholderia cenocepacia J2315 6804244 YP_002153740.1 CDS BCAS0350 NC_011002.1 409112 410227 R hypothetical protein complement(409112..410227) Burkholderia cenocepacia J2315 6804245 YP_002153741.1 CDS BCAS0351 NC_011002.1 410200 410766 R carboxymuconolactone decarboxylase family protein complement(410200..410766) Burkholderia cenocepacia J2315 6804246 YP_002153742.1 CDS BCAS0352 NC_011002.1 410891 411847 R AraC family regulatory protein complement(410891..411847) Burkholderia cenocepacia J2315 6804247 YP_002153743.1 CDS BCAS0353 NC_011002.1 412079 413167 R putative aldose 1-epimerase complement(412079..413167) Burkholderia cenocepacia J2315 6804248 YP_002153744.1 CDS BCAS0354 NC_011002.1 413195 414388 R AraC family regulatory protein complement(413195..414388) Burkholderia cenocepacia J2315 6804249 YP_002153745.1 CDS xylA NC_011002.1 414654 415976 D catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 414654..415976 Burkholderia cenocepacia J2315 6804251 YP_002153746.1 CDS xylF NC_011002.1 416103 417131 D D-xylose-binding periplasmic protein precursor 416103..417131 Burkholderia cenocepacia J2315 6803993 YP_002153747.1 CDS xylG NC_011002.1 417195 418754 D with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit 417195..418754 Burkholderia cenocepacia J2315 6803994 YP_002153748.1 CDS xylH NC_011002.1 418751 419950 D Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri xylose transport system permease protein XylH xylH SWALL:XYLH_ECOLI (SWALL:P37389) (393 aa) fasta scores: E(): 2.7e-70, 54.98% id in 371 aa; homology does not extend to far N-terminus; xylose transport system permease protein 418751..419950 Burkholderia cenocepacia J2315 6803995 YP_002153749.1 CDS BCAS0359 NC_011002.1 419991 420308 D no significant database hits; hypothetical protein 419991..420308 Burkholderia cenocepacia J2315 6803996 YP_002153750.1 CDS BCAS0360 NC_011002.1 420353 422458 R TonB-dependent receptor complement(420353..422458) Burkholderia cenocepacia J2315 6804252 YP_002153751.1 CDS BCAS0361 NC_011002.1 422917 423837 R LysR family regulatory protein complement(422917..423837) Burkholderia cenocepacia J2315 6804253 YP_002153752.1 CDS BCAS0362 NC_011002.1 423919 424869 D putative 2-dehydropantoate 2-reductase 423919..424869 Burkholderia cenocepacia J2315 6804254 YP_002153753.1 CDS BCAS0363 NC_011002.1 424866 425258 D glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 424866..425258 Burkholderia cenocepacia J2315 6804255 YP_002153754.1 CDS BCAS0364 NC_011002.1 425261 425719 D putative maoC domain protein 425261..425719 Burkholderia cenocepacia J2315 6804256 YP_002153755.1 CDS BCAS0365 NC_011002.1 425716 426942 D putative CoA-transferase family protein 425716..426942 Burkholderia cenocepacia J2315 6804257 YP_002153756.1 CDS BCAS0366 NC_011002.1 426939 427772 D putative shikimate dehydrogenase 426939..427772 Burkholderia cenocepacia J2315 6804258 YP_002153757.1 CDS citA NC_011002.1 428096 429412 R citrate-proton symporter complement(428096..429412) Burkholderia cenocepacia J2315 6804259 YP_002153758.1 CDS citB NC_011002.1 429479 430681 R citrate utilization protein B complement(429479..430681) Burkholderia cenocepacia J2315 6803963 YP_002153759.1 CDS BCAS0369 NC_011002.1 430668 432074 R catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; tricarballylate dehydrogenase complement(430668..432074) Burkholderia cenocepacia J2315 6803964 YP_002153760.1 CDS BCAS0370 NC_011002.1 432149 433090 R LysR family regulatory protein complement(432149..433090) Burkholderia cenocepacia J2315 6804260 YP_002153761.1 CDS BCAS0371 NC_011002.1 433374 434555 R hypothetical protein complement(433374..434555) Burkholderia cenocepacia J2315 6804261 YP_002153762.1 CDS BCAS0372 NC_011002.1 434588 436369 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(434588..436369) Burkholderia cenocepacia J2315 6804262 YP_002153763.1 CDS BCAS0373 NC_011002.1 436572 437609 R LacI family regulatory protein complement(436572..437609) Burkholderia cenocepacia J2315 6804263 YP_002153764.1 CDS BCAS0374 NC_011002.1 437906 439252 D Major Facilitator Superfamily protein 437906..439252 Burkholderia cenocepacia J2315 6804264 YP_002153765.1 CDS BCAS0375 NC_011002.1 439430 440596 R putative aspartate aminotransferase complement(439430..440596) Burkholderia cenocepacia J2315 6804265 YP_002153766.1 CDS BCAS0376 NC_011002.1 440651 441301 D GntR family regulatory protein 440651..441301 Burkholderia cenocepacia J2315 6804266 YP_002153767.1 CDS BCAS0377 NC_011002.1 441466 442041 R hypothetical protein complement(441466..442041) Burkholderia cenocepacia J2315 6804267 YP_002153768.1 CDS BCAS0378 NC_011002.1 442333 443808 D LuxR superfamily regulatory protein 442333..443808 Burkholderia cenocepacia J2315 6804268 YP_002153769.1 CDS BCAS0379 NC_011002.1 443986 445467 R Major Facilitator Superfamily protein complement(443986..445467) Burkholderia cenocepacia J2315 6804269 YP_002153770.1 CDS BCAS0380 NC_011002.1 445518 446114 R TetR family regulatory protein complement(445518..446114) Burkholderia cenocepacia J2315 6804270 YP_002153771.1 CDS gabD NC_011002.1 446246 447718 R succinate-semialdehyde dehydrogenase (NADP+) complement(446246..447718) Burkholderia cenocepacia J2315 6804271 YP_002153772.1 CDS BCAS0382 NC_011002.1 447829 448338 R AnsC family regulatory protein complement(447829..448338) Burkholderia cenocepacia J2315 6803976 YP_002153773.1 CDS BCAS0383 NC_011002.1 448406 449806 R hypothetical protein complement(448406..449806) Burkholderia cenocepacia J2315 6804272 YP_002153774.1 CDS BCAS0384 NC_011002.1 449967 450893 R putative dehydrogenase complement(449967..450893) Burkholderia cenocepacia J2315 6804273 YP_002153775.1 CDS BCAS0385 NC_011002.1 450906 451766 R putative GNAT family acetyltransferase complement(450906..451766) Burkholderia cenocepacia J2315 6804274 YP_002153776.1 CDS BCAS0386 NC_011002.1 452181 452849 D putative haloacid dehalogenase-like hydrolase 452181..452849 Burkholderia cenocepacia J2315 6804275 YP_002153777.1 CDS BCAS0388 NC_011002.1 453248 454864 D putative periplasmic solute-binding protein 453248..454864 Burkholderia cenocepacia J2315 6804276 YP_002153778.1 CDS BCAS0389 NC_011002.1 454944 455897 D putative binding-protein-dependent transport system protein 454944..455897 Burkholderia cenocepacia J2315 6804277 YP_002153779.1 CDS BCAS0390 NC_011002.1 455928 456887 D putative binding-protein-dependent transport system protein 455928..456887 Burkholderia cenocepacia J2315 6804278 YP_002153780.1 CDS BCAS0391 NC_011002.1 456957 458132 D Similar to C terminus of Pseudomonas syringae peptide ABC transporter, ATP-binding protein SWALL:Q88AY1 (EMBL:AE016856) (613 aa) fasta scores: E(): 2.6e-65, 53.23% id in 387 aa; ABC transporter ATP-binding protein 456957..458132 Burkholderia cenocepacia J2315 6804279 YP_002153781.1 CDS BCAS0392 NC_011002.1 458329 459606 D putative FAD-binding oxidoreductase 458329..459606 Burkholderia cenocepacia J2315 6804280 YP_002153782.1 CDS BCAS0393 NC_011002.1 459630 460061 D AraC family regulatory protein 459630..460061 Burkholderia cenocepacia J2315 6804281 YP_002153783.1 CDS BCAS0394 NC_011002.1 460181 460915 D hypothetical protein 460181..460915 Burkholderia cenocepacia J2315 6804282 YP_002153784.1 CDS BCAS0395 NC_011002.1 460918 462243 D putative FAD-dependent oxidoreductase 460918..462243 Burkholderia cenocepacia J2315 6804283 YP_002153785.1 CDS BCAS0396 NC_011002.1 462337 463806 D putative dehydrogenase 462337..463806 Burkholderia cenocepacia J2315 6804284 YP_002153786.1 CDS BCAS0397 NC_011002.1 463876 465063 D subfamily M20D metallo peptidase 463876..465063 Burkholderia cenocepacia J2315 6804285 YP_002153787.1 CDS BCAS0398 NC_011002.1 465169 466689 R putative diguanylate cyclase complement(465169..466689) Burkholderia cenocepacia J2315 6804286 YP_002153788.1 CDS citH NC_011002.1 466950 468311 D citrate-proton symporter 466950..468311 Burkholderia cenocepacia J2315 6804287 YP_002153789.1 CDS BCAS0400 NC_011002.1 468370 469152 D putative periplasmic solute-binding protein 468370..469152 Burkholderia cenocepacia J2315 6803965 YP_002153790.1 CDS dctA NC_011002.1 469177 470505 R aerobic C4-dicarboxylate transport protein complement(469177..470505) Burkholderia cenocepacia J2315 6804288 YP_002153791.1 CDS BCAS0402 NC_011002.1 470540 471481 R LysR family regulatory protein complement(470540..471481) Burkholderia cenocepacia J2315 6803967 YP_002153792.1 CDS BCAS0403 NC_011002.1 471619 471810 R no significant database hits; hypothetical protein complement(471619..471810) Burkholderia cenocepacia J2315 6804289 YP_002153793.1 CDS BCAS0404 NC_011002.1 472373 474508 D hypothetical protein 472373..474508 Burkholderia cenocepacia J2315 6804290 YP_002153794.1 CDS BCAS0405 NC_011002.1 474542 475777 D Similar to C terminus of Alicyclobacillus sendaiensis kumamolisin-as scpA SWALL:Q8GB88 (EMBL:AB085855) (553 aa) fasta scores: E(): 3.2e-10, 33.01% id in 415 aa; family S53 serine peptidase; serine-carboxyl peptidase 474542..475777 Burkholderia cenocepacia J2315 6804291 YP_002153795.1 CDS BCAS0406 NC_011002.1 475884 476897 D hypothetical protein 475884..476897 Burkholderia cenocepacia J2315 6804292 YP_002153796.1 CDS BCAS0407 NC_011002.1 477076 477390 R no significant database hits; hypothetical protein complement(477076..477390) Burkholderia cenocepacia J2315 6804293 YP_002153797.1 CDS zmpA NC_011002.1 478548 480245 D family M4 metallo peptidase; zinc metalloprotease ZmpA 478548..480245 Burkholderia cenocepacia J2315 6804294 YP_002153798.1 CDS BCAS0410 NC_011002.1 480680 481522 D hypothetical protein 480680..481522 Burkholderia cenocepacia J2315 6803997 YP_002153799.1 CDS BCAS0411 NC_011002.1 481578 482852 R no significant database hits; hypothetical protein complement(481578..482852) Burkholderia cenocepacia J2315 6804295 YP_002153800.1 CDS BCAS0412 NC_011002.1 483271 483591 D hypothetical protein 483271..483591 Burkholderia cenocepacia J2315 6804296 YP_002153801.1 CDS BCAS0413 NC_011002.1 483661 484641 R hypothetical protein complement(483661..484641) Burkholderia cenocepacia J2315 6804297 YP_002153802.1 CDS BCAS0414 NC_011002.1 484702 485046 R hypothetical protein complement(484702..485046) Burkholderia cenocepacia J2315 6804298 YP_002153803.1 CDS BCAS0415 NC_011002.1 485541 486725 D putative porin protein 485541..486725 Burkholderia cenocepacia J2315 6804299 YP_002153804.1 CDS BCAS0416 NC_011002.1 486845 488101 D putative oxidoreductase 486845..488101 Burkholderia cenocepacia J2315 6804300 YP_002153805.1 CDS BCAS0417 NC_011002.1 488094 488618 D putative cytochrome c 488094..488618 Burkholderia cenocepacia J2315 6804301 YP_002153806.1 CDS BCAS0418 NC_011002.1 488695 489882 D putative luciferase-like monooxygenase 488695..489882 Burkholderia cenocepacia J2315 6804302 YP_002153807.1 CDS BCAS0419 NC_011002.1 489937 491154 R putative acyl-CoA dehydrogenase protein complement(489937..491154) Burkholderia cenocepacia J2315 6804303 YP_002153808.1 CDS BCAS0420 NC_011002.1 491317 492204 R putative binding-protein-dependent transport system protein complement(491317..492204) Burkholderia cenocepacia J2315 6804304 YP_002153809.1 CDS BCAS0422a NC_011002.1 492812 493777 D putative transposase 492812..493777 Burkholderia cenocepacia J2315 6804306 YP_002153810.1 CDS BCAS0425 NC_011002.1 494438 495454 R hypothetical protein complement(494438..495454) Burkholderia cenocepacia J2315 6804307 YP_002153811.1 CDS BCAS0426 NC_011002.1 495519 496391 R putative taurine dioxygenase complement(495519..496391) Burkholderia cenocepacia J2315 6804308 YP_002153812.1 CDS BCAS0427 NC_011002.1 496664 497674 R Similar to Xanthomonas campestris oxidoreductase SWALL:Q8PBP0 (EMBL:AE012205) (300 aa) fasta scores: E(): 1.7e-57, 59.37% id in 288 aa; contains 4 amino acid N terminal extension; putative short-chain dehydrogenase complement(496664..497674) Burkholderia cenocepacia J2315 6804309 YP_002153813.1 CDS BCAS0428 NC_011002.1 497738 498022 R no significant database hits; hypothetical protein complement(497738..498022) Burkholderia cenocepacia J2315 6804310 YP_002153814.1 CDS BCAS0429 NC_011002.1 498309 498455 D no significant database hits; hypothetical protein 498309..498455 Burkholderia cenocepacia J2315 6804311 YP_002153815.1 CDS BCAS0430 NC_011002.1 498517 498786 R hypothetical protein complement(498517..498786) Burkholderia cenocepacia J2315 6804312 YP_002153816.1 CDS BCAS0431 NC_011002.1 498813 499238 R hypothetical protein complement(498813..499238) Burkholderia cenocepacia J2315 6804313 YP_002153817.1 CDS BCAS0432 NC_011002.1 499311 500021 R Similar to Enterococcus faecalis sapb protein, putative SWALL:Q837S2 (EMBL:AE016949) (239 aa) fasta scores: E(): 4.8e-14, 37.22% id in 180 aa; homology does not extend to C terminus; putative MgtC family protein complement(499311..500021) Burkholderia cenocepacia J2315 6804314 YP_002153818.1 CDS BCAS0433 NC_011002.1 500515 500799 D putative DNA-binding protein 500515..500799 Burkholderia cenocepacia J2315 6804315 YP_002153819.1 CDS BCAS0434 NC_011002.1 500789 502093 D HipA-like protein 500789..502093 Burkholderia cenocepacia J2315 6804316 YP_002153820.1 CDS BCAS0435 NC_011002.1 502163 503128 R oxidoreductase complement(502163..503128) Burkholderia cenocepacia J2315 6804317 YP_002153821.1 CDS BCAS0436 NC_011002.1 503268 504188 D AraC family regulatory protein 503268..504188 Burkholderia cenocepacia J2315 6804318 YP_002153822.1 CDS BCAS0437 NC_011002.1 504332 504862 R OsmC family protein complement(504332..504862) Burkholderia cenocepacia J2315 6804319 YP_002153823.1 CDS BCAS0438 NC_011002.1 504923 505993 R putative transport system protein complement(504923..505993) Burkholderia cenocepacia J2315 6804320 YP_002153824.1 CDS BCAS0439 NC_011002.1 506161 507195 R putative transport system protein complement(506161..507195) Burkholderia cenocepacia J2315 6804321 YP_002153825.1 CDS BCAS0440 NC_011002.1 507219 508757 R ABC transporter ATP-binding protein complement(507219..508757) Burkholderia cenocepacia J2315 6804322 YP_002153826.1 CDS BCAS0441 NC_011002.1 508884 510266 R hypothetical protein complement(508884..510266) Burkholderia cenocepacia J2315 6804323 YP_002153827.1 CDS BCAS0442 NC_011002.1 510293 511060 R putative binding-protein-dependent transport system protein complement(510293..511060) Burkholderia cenocepacia J2315 6804324 YP_002153828.1 CDS BCAS0443 NC_011002.1 511057 511791 R putative binding-protein-dependent transport system protein complement(511057..511791) Burkholderia cenocepacia J2315 6804325 YP_002153829.1 CDS BCAS0444 NC_011002.1 511796 512587 R periplasmic solute-binding protein complement(511796..512587) Burkholderia cenocepacia J2315 6804326 YP_002153830.1 CDS BCAS0445 NC_011002.1 512777 514084 R Similar to Chelatobacter heintzii nitrilotriacetate monooxygenase component a ntaA SWALL:NTAA_CHEHE (SWALL:P54989) (453 aa) fasta scores: E(): 2.6e-34, 35.3% id in 422 aa; homology doesn't extend to N terminus; putative monooxygenase complement(512777..514084) Burkholderia cenocepacia J2315 6804327 YP_002153831.1 CDS BCAS0446 NC_011002.1 514470 515558 D putative luciferase-like monooxygenase 514470..515558 Burkholderia cenocepacia J2315 6804328 YP_002153832.1 CDS BCAS0447 NC_011002.1 515555 516130 D putative GNAT family acetyltransferase 515555..516130 Burkholderia cenocepacia J2315 6804329 YP_002153833.1 CDS BCAS0448 NC_011002.1 516208 517848 D putative periplasmic solute-binding protein 516208..517848 Burkholderia cenocepacia J2315 6804330 YP_002153834.1 CDS BCAS0449 NC_011002.1 517910 518920 D Similar to Escherichia coli nickel transport system permease protein NikB nikB SWALL:NIKB_ECOLI (SWALL:P33591) (314 aa) fasta scores: E(): 1.1e-26, 33.44% id in 299 aa; contains 30 amino acid N terminal extension; contains putative N terminal signal sequence; putative binding-protein-dependent transport system protein 517910..518920 Burkholderia cenocepacia J2315 6804331 YP_002153835.1 CDS BCAS0450 NC_011002.1 518933 519802 D putative binding-protein-dependent transport system protein 518933..519802 Burkholderia cenocepacia J2315 6804332 YP_002153836.1 CDS BCAS0451 NC_011002.1 519799 521478 D ABC transporter ATP-binding protein 519799..521478 Burkholderia cenocepacia J2315 6804333 YP_002153837.1 CDS BCAS0452 NC_011002.1 521590 521802 R hypothetical protein complement(521590..521802) Burkholderia cenocepacia J2315 6804334 YP_002153838.1 CDS BCAS0453 NC_011002.1 521799 522176 R hypothetical protein complement(521799..522176) Burkholderia cenocepacia J2315 6804335 YP_002153839.1 CDS BCAS0454 NC_011002.1 522392 523150 D hypothetical protein 522392..523150 Burkholderia cenocepacia J2315 6804336 YP_002153840.1 CDS BCAS0455 NC_011002.1 523240 523425 D putative CopG family protein 523240..523425 Burkholderia cenocepacia J2315 6804337 YP_002153841.1 CDS BCAS0456 NC_011002.1 523486 524322 R hypothetical protein complement(523486..524322) Burkholderia cenocepacia J2315 6804338 YP_002153842.1 CDS phnA NC_011002.1 524390 524731 R alkylphosphonate uptake protein complement(524390..524731) Burkholderia cenocepacia J2315 6804339 YP_002153843.1 CDS BCAS0458 NC_011002.1 525107 525358 D putative phosphocarrier protein 525107..525358 Burkholderia cenocepacia J2315 6803987 YP_002153844.1 CDS BCAS0459 NC_011002.1 525424 525645 D hypothetical protein 525424..525645 Burkholderia cenocepacia J2315 6804340 YP_002153845.1 CDS BCAS0460 NC_011002.1 525665 526780 R putative porin protein complement(525665..526780) Burkholderia cenocepacia J2315 6804341 YP_002153846.1 CDS BCAS0461 NC_011002.1 526968 527849 R contains TM1410 hypothetical-related domain; putative lipoprotein complement(526968..527849) Burkholderia cenocepacia J2315 6804342 YP_002153847.1 CDS BCAS0462 NC_011002.1 527975 530110 R putative alpha-galactosidase complement(527975..530110) Burkholderia cenocepacia J2315 6804343 YP_002153848.1 CDS BCAS0463 NC_011002.1 530474 531376 D hypothetical protein 530474..531376 Burkholderia cenocepacia J2315 6804344 YP_002153849.1 CDS BCAS0464 NC_011002.1 531373 532668 D putative tagose-1,6-bisphosphate aldolase 531373..532668 Burkholderia cenocepacia J2315 6804345 YP_002153850.1 CDS BCAS0465 NC_011002.1 532691 533872 D putative tagatose-6-phosphate ketose/aldose isomerase 532691..533872 Burkholderia cenocepacia J2315 6804346 YP_002153851.1 CDS BCAS0466 NC_011002.1 533869 534843 D putative N-acetylglucosamine kinase 533869..534843 Burkholderia cenocepacia J2315 6804347 YP_002153852.1 CDS BCAS0467 NC_011002.1 534878 535690 D Similar to Escherichia coli glucitol operon repressor srlR SWALL:SRLR_ECOLI (SWALL:P15082) (257 aa) fasta scores: E(): 4.9e-21, 35.74% id in 249 aa; contains 20 amino acid N terminal extension; DeoR family regulatory protein 534878..535690 Burkholderia cenocepacia J2315 6804348 YP_002153853.1 CDS BCAS0468 NC_011002.1 535723 536262 D putative GNAT family acetyltransferase 535723..536262 Burkholderia cenocepacia J2315 6804349 YP_002153854.1 CDS BCAS0468a NC_011002.1 536285 536506 R no significant database hits; hypothetical protein complement(536285..536506) Burkholderia cenocepacia J2315 6804350 YP_002153855.1 CDS BCAS0469 NC_011002.1 536530 536862 R hypothetical protein complement(536530..536862) Burkholderia cenocepacia J2315 6804351 YP_002153856.1 CDS BCAS0470 NC_011002.1 537451 538161 D two-component regulatory system, response regulator protein 537451..538161 Burkholderia cenocepacia J2315 6804352 YP_002153857.1 CDS BCAS0471 NC_011002.1 538229 539830 R outer membrane efflux protein complement(538229..539830) Burkholderia cenocepacia J2315 6804353 YP_002153858.1 CDS BCAS0472 NC_011002.1 539880 541472 R putative multidrug resistance transporter protein complement(539880..541472) Burkholderia cenocepacia J2315 6804354 YP_002153859.1 CDS BCAS0473 NC_011002.1 541558 542946 R Similar to Ralstonia solanacearum probable multidrug resistance transport transmembrane protein rs00128 SWALL:Q8XVV1 (EMBL:AL646071) (388 aa) fasta scores: E(): 1.1e-30, 40.69% id in 376 aa; homology does not extend to N terminus; contains 60 amino acid N terminal extension; efflux system transport protein complement(541558..542946) Burkholderia cenocepacia J2315 6804355 YP_002153860.1 CDS BCAS0475 NC_011002.1 543466 543987 D Similar to Pseudomonas putida mutt/nudix family protein SWALL:Q88HT5 (EMBL:AE016786) (132 aa) fasta scores: E(): 4.7e-08, 41.12% id in 107 aa; homology does not extend to C terminus; contains 30 amino acid N terminal extension; hydrolyses nucleoside diphosphate derivatives; NUDIX hydrolase 543466..543987 Burkholderia cenocepacia J2315 6804356 YP_002153861.1 CDS BCAS0476 NC_011002.1 543962 544444 R hypothetical protein complement(543962..544444) Burkholderia cenocepacia J2315 6804357 YP_002153862.1 CDS BCAS0477 NC_011002.1 544558 545037 R putative lipoprotein complement(544558..545037) Burkholderia cenocepacia J2315 6804358 YP_002153863.1 CDS BCAS0478 NC_011002.1 545203 545709 R Similar to Bordetella parapertussis putative membrane protein SWALL:Q7WAW6 (EMBL:BX640426) (202 aa) fasta scores: E(): 2.2e-20, 45.23% id in 168 aa; contains 20 amino acid C terminal truncation; hypothetical protein complement(545203..545709) Burkholderia cenocepacia J2315 6804359 YP_002153864.1 CDS BCAS0479 NC_011002.1 545860 546600 R hypothetical protein complement(545860..546600) Burkholderia cenocepacia J2315 6804360 YP_002153865.1 CDS BCAS0480 NC_011002.1 546727 547110 R hypothetical protein complement(546727..547110) Burkholderia cenocepacia J2315 6804361 YP_002153866.1 CDS BCAS0481 NC_011002.1 547202 548782 R FAD flavoprotein oxidoreductase complement(547202..548782) Burkholderia cenocepacia J2315 6804362 YP_002153867.1 CDS BCAS0482 NC_011002.1 548859 549524 R Similar to Burkholderia pseudomallei hypothetical protein SWALL:Q63X13 (EMBL:BX571965) (278 aa) fasta scores: E(): 6.2e-32, 56.03% id in 257 aa; contains 20 amino acid C terminal truncation; contains 35 amino acid gap after codon 73; hypothetical protein complement(548859..549524) Burkholderia cenocepacia J2315 6804363 YP_002153868.1 CDS BCAS0483 NC_011002.1 549521 550372 R hypothetical protein complement(549521..550372) Burkholderia cenocepacia J2315 6804364 YP_002153869.1 CDS BCAS0484 NC_011002.1 550392 551492 R putative mandelate racemase complement(550392..551492) Burkholderia cenocepacia J2315 6804365 YP_002153870.1 CDS BCAS0485 NC_011002.1 551624 553468 D thiamine pyrophosphate protein 551624..553468 Burkholderia cenocepacia J2315 6804366 YP_002153871.1 CDS BCAS0486 NC_011002.1 553497 555275 R putative glycosyl hydrolase complement(553497..555275) Burkholderia cenocepacia J2315 6804367 YP_002153872.1 CDS BCAS0487 NC_011002.1 555281 556264 R short chain dehydrogenase complement(555281..556264) Burkholderia cenocepacia J2315 6804368 YP_002153873.1 CDS BCAS0488 NC_011002.1 556557 557618 D Similar to Bacillus pseudofirmus cytochrome c oxidase polypeptide ii precursor ctaC SWALL:COX2_BACPF (SWALL:Q04441) (342 aa) fasta scores: E(): 6.6e-27, 34.39% id in 314 aa; homology does not extend to N terminus; putative cytochrome c oxidase polypeptide II precursor 556557..557618 Burkholderia cenocepacia J2315 6804369 YP_002153874.1 CDS BCAS0489 NC_011002.1 557632 560271 D Similar to Bacillus PS3 cytochrome c oxidase polypeptide i ctaD SWALL:COX1_BACP3 (SWALL:P16262) (615 aa) fasta scores: E(): 2.1e-89, 44.69% id in 575 aa; homology does not extend to N and C termini; putative cytochrome c oxidase subunit I 557632..560271 Burkholderia cenocepacia J2315 6804370 YP_002153875.1 CDS BCAS0490 NC_011002.1 560268 560669 D hypothetical protein 560268..560669 Burkholderia cenocepacia J2315 6804371 YP_002153876.1 CDS BCAS0491 NC_011002.1 560684 562243 D Similar to Acetobacter polyoxogenes, and Acetobacter europaeus alcohol dehydrogenase cytochrome c subunit precursor adhB SWALL:CYCA_ACEPO (SWALL:Q03318) (468 aa) fasta scores: E(): 5e-57, 46.3% id in 406 aa; homology does not extend to N and C termini; cytochrome c family protein 560684..562243 Burkholderia cenocepacia J2315 6804372 YP_002153877.1 CDS BCAS0492 NC_011002.1 562347 562745 R putative endoribonuclease L-psp family protein complement(562347..562745) Burkholderia cenocepacia J2315 6804373 YP_002153878.1 CDS benC NC_011002.1 563592 564614 R benzoate 1,2-dioxygenase electron transfer component complement(563592..564614) Burkholderia cenocepacia J2315 6804659 YP_002153879.1 CDS benB NC_011002.1 564654 565142 R benzoate 1,2-dioxygenase beta subunit complement(564654..565142) Burkholderia cenocepacia J2315 6804658 YP_002153880.1 CDS benA NC_011002.1 565139 566497 R benzoate 1,2-dioxygenase alpha subunit complement(565139..566497) Burkholderia cenocepacia J2315 6804657 YP_002153881.1 CDS catA2 NC_011002.1 566615 567556 R catechol 1,2-dioxygenase 2 complement(566615..567556) Burkholderia cenocepacia J2315 6804656 YP_002153882.1 CDS catB2 NC_011002.1 567608 568744 R muconate cycloisomerase I 2 complement(567608..568744) Burkholderia cenocepacia J2315 6804663 YP_002153883.1 CDS BCAS0499 NC_011002.1 569292 569735 R putative exported monooxygenase complement(569292..569735) Burkholderia cenocepacia J2315 6804664 YP_002153884.1 CDS BCAS0500 NC_011002.1 569835 570860 R putative aldo/keto reductase family protein complement(569835..570860) Burkholderia cenocepacia J2315 6804375 YP_002153885.1 CDS BCAS0501 NC_011002.1 570994 571293 R hypothetical protein complement(570994..571293) Burkholderia cenocepacia J2315 6804376 YP_002153886.1 CDS BCAS0502 NC_011002.1 571290 571850 R putative flavodoxin protein complement(571290..571850) Burkholderia cenocepacia J2315 6804377 YP_002153887.1 CDS BCAS0503 NC_011002.1 572009 572965 D LysR family regulatory protein 572009..572965 Burkholderia cenocepacia J2315 6804378 YP_002153888.1 CDS BcepMu53 NC_011002.1 573366 574499 D possible virulence factor; putative phage transmembrane acetyltransferase 573366..574499 Burkholderia cenocepacia J2315 6804379 YP_002153889.1 CDS BcepMu52 NC_011002.1 574700 577057 R Similar to Salmonella typhi bacteriophage tail fiber protein SWALL:Q8Z6S9 (EMBL:AL627270) (341 aa) fasta scores: E(): 1.1e-10, 42.6% id in 230 aa; homology does not extend to C terminus; hypothetical protein complement(574700..577057) Burkholderia cenocepacia J2315 6804651 YP_002153890.1 CDS BcepMu51 NC_011002.1 577057 577638 R putative phage tail protein gpI complement(577057..577638) Burkholderia cenocepacia J2315 6804650 YP_002153891.1 CDS BcepMu50 NC_011002.1 577631 578782 R Similar to Bacteriophage P2 baseplate assembly protein j J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 2.7e-06, 33.5% id in 197 aa; homology doesn't extend to N terminus; putative phage baseplate assembly protein gpJ complement(577631..578782) Burkholderia cenocepacia J2315 6804649 YP_002153892.1 CDS BcepMu49 NC_011002.1 578779 579132 R putative phage baseplate protein gpW complement(578779..579132) Burkholderia cenocepacia J2315 6804648 YP_002153893.1 CDS BcepMu48 NC_011002.1 579186 579788 R putative phage baseplate assembly protein gpV complement(579186..579788) Burkholderia cenocepacia J2315 6804646 YP_002153894.1 CDS BcepMu47 NC_011002.1 579785 580990 R Similar to Bacteriophage P2 gene d protein D SWALL:VPD_BPP2 (SWALL:P10312) (387 aa) fasta scores: E(): 5e-12, 28.69% id in 237 aa; homology does not extend to C terminus; hypothetical protein complement(579785..580990) Burkholderia cenocepacia J2315 6804645 YP_002153895.1 CDS BcepMu46 NC_011002.1 580978 581187 R putative phage tail protein gpX complement(580978..581187) Burkholderia cenocepacia J2315 6804644 YP_002153896.1 CDS BcepMu45 NC_011002.1 581187 582077 R hypothetical protein complement(581187..582077) Burkholderia cenocepacia J2315 6804643 YP_002153897.1 CDS BcepMu44 NC_011002.1 582079 584619 R putative phage tail protein complement(582079..584619) Burkholderia cenocepacia J2315 6804642 YP_002153898.1 CDS BcepMu43 NC_011002.1 584592 >584978 R alternative BcepMu42 C-termninus produced by ribosomal slippage. CDS lacks translational start; hypothetical protein complement(584592..>584978) Burkholderia cenocepacia J2315 6804641 YP_002153899.1 CDS BcepMu42 NC_011002.1 584894 585097 R putative Lambda G-pre-tape measure frameshift protein complement(584894..585097) Burkholderia cenocepacia J2315 6804640 YP_002153900.1 CDS BcepMu41 NC_011002.1 585024 585353 R CDS is extended at the C-terminus in comparison to similar proteins, possible frameshift extends the CDS. Similar to Chromobacterium violaceum hypothetical protein UniProt:Q7NY03 (EMBL:AE016825 (88 aa) fasta scores: E()=5.5e-10, 51.899% id in 79 aa; hypothetical protein complement(585024..585353) Burkholderia cenocepacia J2315 6804639 YP_002153901.1 CDS BcepMu40 NC_011002.1 585475 585999 R putative phage tail tube protein complement(585475..585999) Burkholderia cenocepacia J2315 6804638 YP_002153902.1 CDS BcepMu39 NC_011002.1 586002 587435 R Similar to Bacteriophage P2 major tail sheath protein fI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 1.5e-17, 33.11% id in 302 aa; homology doesn't extend to N terminus; putative phage tail sheath protein complement(586002..587435) Burkholderia cenocepacia J2315 6804637 YP_002153903.1 CDS BcepMu38 NC_011002.1 587439 587684 R hypothetical protein complement(587439..587684) Burkholderia cenocepacia J2315 6804635 YP_002153904.1 CDS BcepMu37 NC_011002.1 587681 588145 R hypothetical protein complement(587681..588145) Burkholderia cenocepacia J2315 6804634 YP_002153905.1 CDS BcepMu36 NC_011002.1 588145 588597 R hypothetical protein complement(588145..588597) Burkholderia cenocepacia J2315 6804633 YP_002153906.1 CDS BcepMu35 NC_011002.1 588599 588931 R hypothetical protein complement(588599..588931) Burkholderia cenocepacia J2315 6804632 YP_002153907.1 CDS BcepMu34 NC_011002.1 589006 589929 R hypothetical protein complement(589006..589929) Burkholderia cenocepacia J2315 6804631 YP_002153908.1 CDS BcepMu32 NC_011002.1 589975 591105 R Possible alternative translational start site after codon 220; hypothetical protein complement(589975..591105) Burkholderia cenocepacia J2315 6804630 YP_002153909.1 CDS BcepMu31 NC_011002.1 591308 591835 R putative phage Mu G virion morphogenesis protein complement(591308..591835) Burkholderia cenocepacia J2315 6804629 YP_002153910.1 CDS BcepMu30 NC_011002.1 591832 592668 R Similar to N terminus of Bacteriophage Mu protein F SWALL:VPF_BPMU (SWALL:Q01259) (439 aa) fasta scores: E(): 6.3e-52, 50.56% id in 265 aa. possible minor head protein; phage Mu F virion morphogenesis protein complement(591832..592668) Burkholderia cenocepacia J2315 6804628 YP_002153911.1 CDS BcepMu29 NC_011002.1 592661 594136 R Similar to Bacteriophage Mu protein gp29 29 SWALL:VG29_BPMU (SWALL:Q9T1W5) (512 aa) fasta scores: E(): 5.9e-23, 27.77% id in 450 aa; homology does not extend to N terminus; hypothetical protein complement(592661..594136) Burkholderia cenocepacia J2315 6804627 YP_002153912.1 CDS BcepMu28 NC_011002.1 594133 595635 R putative phage portal protein complement(594133..595635) Burkholderia cenocepacia J2315 6804625 YP_002153913.1 CDS BcepMu27 NC_011002.1 595632 596177 R hypothetical protein complement(595632..596177) Burkholderia cenocepacia J2315 6804624 YP_002153914.1 CDS BcepMu26 NC_011002.1 596179 596511 R hypothetical protein complement(596179..596511) Burkholderia cenocepacia J2315 6804623 YP_002153915.1 CDS BcepMu25 NC_011002.1 596508 596846 R putative phage membrane protein complement(596508..596846) Burkholderia cenocepacia J2315 6804622 YP_002153916.1 CDS BcepMu23 NC_011002.1 596843 597442 R Similar to Erwinia carotovora hypothetical protein SWALL:Q6D3G6 (EMBL:BX950851) (224 aa) fasta scores: E(): 1.4e-05, 33.51% id in 182 aa. Putative lytic function; putative phage protein Rz complement(596843..597442) Burkholderia cenocepacia J2315 6804621 YP_002153917.1 CDS BcepMu24 NC_011002.1 596881 597135 R Rz1, out of frame, embedded proline-rich protein. Putative lytic function; putative proline-rich protein Rz1 complement(596881..597135) Burkholderia cenocepacia J2315 6804619 YP_002153918.1 CDS BcepMu22 NC_011002.1 597439 598050 R putative soluble lytic murein transglycosylase complement(597439..598050) Burkholderia cenocepacia J2315 6804620 YP_002153919.1 CDS BcepMu21 NC_011002.1 598053 598400 R holin complement(598053..598400) Burkholderia cenocepacia J2315 6804618 YP_002153920.1 CDS BcepMu20 NC_011002.1 598467 598691 R hypothetical protein complement(598467..598691) Burkholderia cenocepacia J2315 6804617 YP_002153921.1 CDS BcepMu19 NC_011002.1 598756 599292 R putative phage membrane protein complement(598756..599292) Burkholderia cenocepacia J2315 6804616 YP_002153922.1 CDS BCAS0537 NC_011002.1 599273 599461 R no significant database hits; hypothetical protein complement(599273..599461) Burkholderia cenocepacia J2315 6804614 YP_002153923.1 CDS BcepMu18 NC_011002.1 599534 600316 R putative phage membrane protein complement(599534..600316) Burkholderia cenocepacia J2315 6804380 YP_002153924.1 CDS BcepMu17 NC_011002.1 600313 600729 R cro/cI repressor transcription regulator complement(600313..600729) Burkholderia cenocepacia J2315 6804613 YP_002153925.1 CDS BcepMu16 NC_011002.1 600857 601099 D hypothetical protein 600857..601099 Burkholderia cenocepacia J2315 6804612 YP_002153926.1 CDS BcepMu15 NC_011002.1 600985 601317 D hypothetical protein 600985..601317 Burkholderia cenocepacia J2315 6804611 YP_002153927.1 CDS BcepMu14 NC_011002.1 601148 601384 R hypothetical protein complement(601148..601384) Burkholderia cenocepacia J2315 6804610 YP_002153928.1 CDS BCAS0541 NC_011002.1 601232 601360 D no significant database hits; hypothetical protein 601232..601360 Burkholderia cenocepacia J2315 6804609 YP_002153929.1 CDS BcepMu13 NC_011002.1 601505 601984 D hypothetical protein 601505..601984 Burkholderia cenocepacia J2315 6804381 YP_002153930.1 CDS BcepMu12 NC_011002.1 601981 602283 D putative phage transcriptional regulator 601981..602283 Burkholderia cenocepacia J2315 6804608 YP_002153931.1 CDS BcepMu11 NC_011002.1 602294 602506 D no significant database hits; hypothetical protein 602294..602506 Burkholderia cenocepacia J2315 6804607 YP_002153932.1 CDS BcepMu10 NC_011002.1 602517 603470 D hypothetical protein 602517..603470 Burkholderia cenocepacia J2315 6804606 YP_002153933.1 CDS BcepMu9 NC_011002.1 603488 605287 D Tn552/IS1604 rve transposase 603488..605287 Burkholderia cenocepacia J2315 6804605 YP_002153934.1 CDS BcepMu8 NC_011002.1 605284 606498 D putative DNA-binding phage protein 605284..606498 Burkholderia cenocepacia J2315 6804655 YP_002153935.1 CDS BcepMu7 NC_011002.1 606500 606829 D hypothetical protein 606500..606829 Burkholderia cenocepacia J2315 6804654 YP_002153936.1 CDS BcepMu6 NC_011002.1 606865 607287 D Similar to Clostridium acetobutylicum uncharacterized protein, mazg family SWALL:Q97HS8 (EMBL:AE007699) (123 aa) fasta scores: E(): 0.0095, 39.72% id in 73 aa; homology does not extend to N terminus; hypothetical protein 606865..607287 Burkholderia cenocepacia J2315 6804653 YP_002153937.1 CDS BcepMu5 NC_011002.1 607410 608027 D hypothetical protein 607410..608027 Burkholderia cenocepacia J2315 6804652 YP_002153938.1 CDS BcepMu4 NC_011002.1 608091 608363 D HU DNA-binding protein 608091..608363 Burkholderia cenocepacia J2315 6804647 YP_002153939.1 CDS BcepMu3 NC_011002.1 608457 608798 D single-stranded DNA binding protein 608457..608798 Burkholderia cenocepacia J2315 6804636 YP_002153940.1 CDS BcepMu2 NC_011002.1 608782 609222 D Mu gp16 gemA 608782..609222 Burkholderia cenocepacia J2315 6804626 YP_002153941.1 CDS BcepMu1 NC_011002.1 609219 609590 D Mu protein C/ Mor gp17 transcription regulator 609219..609590 Burkholderia cenocepacia J2315 6804615 YP_002153942.1 CDS BCAS0556 NC_011002.1 612505 613425 D AraC family regulatory protein 612505..613425 Burkholderia cenocepacia J2315 6804382 YP_002153943.1 CDS BCAS0557 NC_011002.1 613450 614484 R metallo-beta-lactamase superfamily protein complement(613450..614484) Burkholderia cenocepacia J2315 6804383 YP_002153944.1 CDS BCAS0558A NC_011002.1 614702 615607 D LysR family regulatory protein 614702..615607 Burkholderia cenocepacia J2315 6804384 YP_002153945.1 CDS BCAS0559 NC_011002.1 615636 617093 R hypothetical protein complement(615636..617093) Burkholderia cenocepacia J2315 6804385 YP_002153946.1 CDS BCAS0560 NC_011002.1 617108 618061 R hypothetical protein complement(617108..618061) Burkholderia cenocepacia J2315 6804386 YP_002153947.1 CDS BCAS0561 NC_011002.1 618212 618508 R Similar to N terminus of Rhodopseudomonas palustris hypothetical protein SWALL:Q6N802 (EMBL:BX572599) (141 aa) fasta scores: E(): 1.9e-11, 62.5% id in 72 aa; hypothetical protein complement(618212..618508) Burkholderia cenocepacia J2315 6804387 YP_002153948.1 CDS BCAS0562 NC_011002.1 618510 620399 R amidohydrolase family protein complement(618510..620399) Burkholderia cenocepacia J2315 6804388 YP_002153949.1 CDS BCAS0564 NC_011002.1 620419 620586 R Similar to N terminus of Xanthomonas campestris hypothetical protein xcc2052 SWALL:Q8P914 (EMBL:AE012311) (102 aa) fasta scores: E(): 9.2e-11, 71.69% id in 53 aa; hypothetical protein complement(620419..620586) Burkholderia cenocepacia J2315 6804389 YP_002153950.1 CDS BCAS0565 NC_011002.1 620755 621441 R putative hydrolase, isochorismatase family complement(620755..621441) Burkholderia cenocepacia J2315 6804390 YP_002153951.1 CDS BCAS0566 NC_011002.1 621748 622026 D hypothetical protein 621748..622026 Burkholderia cenocepacia J2315 6804391 YP_002153952.1 CDS BCAS0568 NC_011002.1 622794 623531 R hypothetical protein complement(622794..623531) Burkholderia cenocepacia J2315 6804394 YP_002153953.1 CDS BCAS0569 NC_011002.1 623513 623749 R hypothetical protein complement(623513..623749) Burkholderia cenocepacia J2315 6804395 YP_002153954.1 CDS BCAS0570 NC_011002.1 624053 624928 D putative alpha/beta hydrolase fold protein 624053..624928 Burkholderia cenocepacia J2315 6804396 YP_002153955.1 CDS BCAS0571 NC_011002.1 624970 626112 D hypothetical protein 624970..626112 Burkholderia cenocepacia J2315 6804397 YP_002153956.1 CDS BCAS0572 NC_011002.1 626040 626309 R hypothetical protein complement(626040..626309) Burkholderia cenocepacia J2315 6804398 YP_002153957.1 CDS BCAS0573 NC_011002.1 626306 626584 R hypothetical protein complement(626306..626584) Burkholderia cenocepacia J2315 6804399 YP_002153958.1 CDS BCAS0574 NC_011002.1 626758 627507 R amino acid ABC transporter ATP-binding protein complement(626758..627507) Burkholderia cenocepacia J2315 6804400 YP_002153959.1 CDS BCAS0575 NC_011002.1 627494 628144 R putative binding-protein-dependent transport system protein complement(627494..628144) Burkholderia cenocepacia J2315 6804401 YP_002153960.1 CDS BCAS0576 NC_011002.1 628141 628827 R putative binding-protein-dependent transport system protein complement(628141..628827) Burkholderia cenocepacia J2315 6804402 YP_002153961.1 CDS BCAS0577 NC_011002.1 628917 629723 R periplasmic solute-binding protein complement(628917..629723) Burkholderia cenocepacia J2315 6804403 YP_002153962.1 CDS ansP NC_011002.1 630195 631685 D L-asparagine permease 630195..631685 Burkholderia cenocepacia J2315 6804404 YP_002153963.1 CDS BCAS0579 NC_011002.1 631757 632062 R hypothetical protein complement(631757..632062) Burkholderia cenocepacia J2315 6804599 YP_002153964.1 CDS BCAS0580 NC_011002.1 632243 632641 R hypothetical protein complement(632243..632641) Burkholderia cenocepacia J2315 6804405 YP_002153965.1 CDS BCAS0581 NC_011002.1 632638 632883 R contains putative SpoVT/AbrB-like domain - transcriptional regulator; putative transcriptional regulatory protein complement(632638..632883) Burkholderia cenocepacia J2315 6804406 YP_002153966.1 CDS BCAS0582 NC_011002.1 633092 636331 D RND family efflux system transporter protein 633092..636331 Burkholderia cenocepacia J2315 6804407 YP_002153967.1 CDS BCAS0583 NC_011002.1 636385 637803 D Similar to Rhodopseudomonas palustris possible cation/heavy metal efflux pump, hlyd family secretion protein precursor ragD SWALL:Q6N8Z6 (EMBL:BX572598) (400 aa) fasta scores: E(): 5.5e-45, 44.72% id in 398 aa; contains 30 amino acid N and C terminal extensions; efflux system transport protein 636385..637803 Burkholderia cenocepacia J2315 6804408 YP_002153968.1 CDS BCAS0584 NC_011002.1 637835 639376 D efflux system outer membrane protein 637835..639376 Burkholderia cenocepacia J2315 6804409 YP_002153969.1 CDS BCAS0585 NC_011002.1 639354 640814 R two-component regulatory system, sensor kinase protein complement(639354..640814) Burkholderia cenocepacia J2315 6804410 YP_002153970.1 CDS BCAS0586 NC_011002.1 640811 641488 R two-component regulatory system, response regulator protein complement(640811..641488) Burkholderia cenocepacia J2315 6804411 YP_002153971.1 CDS BCAS0589 NC_011002.1 642654 643931 R two-component regulatory system, sensor kinase protein complement(642654..643931) Burkholderia cenocepacia J2315 6804415 YP_002153972.1 CDS BCAS0590 NC_011002.1 643915 644664 R two-component regulatory system, response regulator protein complement(643915..644664) Burkholderia cenocepacia J2315 6804416 YP_002153973.1 CDS BCAS0591 NC_011002.1 645029 646246 D efflux system transport protein 645029..646246 Burkholderia cenocepacia J2315 6804417 YP_002153974.1 CDS BCAS0592 NC_011002.1 646259 649456 D RND family efflux system transporter protein 646259..649456 Burkholderia cenocepacia J2315 6804080 YP_002153975.1 CDS BCAS0593 NC_011002.1 649453 650880 D efflux system outer membrane protein 649453..650880 Burkholderia cenocepacia J2315 6804418 YP_002153976.1 CDS BCAS0594 NC_011002.1 651239 652165 D putative ribokinase 651239..652165 Burkholderia cenocepacia J2315 6804419 YP_002153977.1 CDS BCAS0595 NC_011002.1 652206 653579 D putative sugar efflux transporter 652206..653579 Burkholderia cenocepacia J2315 6804420 YP_002153978.1 CDS BCAS0596 NC_011002.1 653582 654634 D hypothetical protein 653582..654634 Burkholderia cenocepacia J2315 6804421 YP_002153979.1 CDS BCAS0597 NC_011002.1 654705 655475 R DeoR family regulatory protein complement(654705..655475) Burkholderia cenocepacia J2315 6804422 YP_002153980.1 CDS deoC NC_011002.1 655622 656302 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 655622..656302 Burkholderia cenocepacia J2315 6803973 YP_002153981.1 CDS BCAS0599 NC_011002.1 656736 657647 D putative phytanoyl-CoA dioxygenase family protein 656736..657647 Burkholderia cenocepacia J2315 6803972 YP_002153982.1 CDS BCAS0600 NC_011002.1 657832 658698 D no significant database hits; hypothetical protein 657832..658698 Burkholderia cenocepacia J2315 6804424 YP_002153983.1 CDS BCAS0601 NC_011002.1 658707 659684 R hypothetical protein complement(658707..659684) Burkholderia cenocepacia J2315 6804425 YP_002153984.1 CDS BCAS0602 NC_011002.1 659681 660589 R hypothetical protein complement(659681..660589) Burkholderia cenocepacia J2315 6804426 YP_002153985.1 CDS BCAS0603 NC_011002.1 660680 661480 D AraC family regulatory protein 660680..661480 Burkholderia cenocepacia J2315 6804427 YP_002153986.1 CDS BCAS0604 NC_011002.1 661495 661980 R hypothetical protein complement(661495..661980) Burkholderia cenocepacia J2315 6804428 YP_002153987.1 CDS BCAS0605 NC_011002.1 661983 662807 R NmrA-like family protein complement(661983..662807) Burkholderia cenocepacia J2315 6804429 YP_002153988.1 CDS BCAS0606 NC_011002.1 662902 663567 D TetR family regulatory protein 662902..663567 Burkholderia cenocepacia J2315 6804430 YP_002153989.1 CDS hbD NC_011002.1 663639 664493 R 3-hydroxybutyryl-CoA dehydrogenase complement(663639..664493) Burkholderia cenocepacia J2315 6804431 YP_002153990.1 CDS bktB NC_011002.1 664532 665725 R catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase complement(664532..665725) Burkholderia cenocepacia J2315 6803981 YP_002153991.1 CDS BCAS0609 NC_011002.1 665775 667448 R putative electron transfer flavoprotein-ubiquinone oxidoreductase complement(665775..667448) Burkholderia cenocepacia J2315 6804660 YP_002153992.1 CDS BCAS0610 NC_011002.1 667485 669275 R putative acyl-CoA dehydrogenase complement(667485..669275) Burkholderia cenocepacia J2315 6804432 YP_002153993.1 CDS BCAS0611 NC_011002.1 669479 670006 D contains DNA binding motifs; putative transposase 669479..670006 Burkholderia cenocepacia J2315 6804433 YP_002153994.1 CDS BCAS0612 NC_011002.1 670006 670842 D putative integrase 670006..670842 Burkholderia cenocepacia J2315 6804434 YP_002153995.1 CDS BCAS0613 NC_011002.1 670931 671767 R AraC family regulatory protein complement(670931..671767) Burkholderia cenocepacia J2315 6804435 YP_002153996.1 CDS BCAS0614 NC_011002.1 671879 673078 D putative monooxygenase 671879..673078 Burkholderia cenocepacia J2315 6804436 YP_002153997.1 CDS BCAS0615 NC_011002.1 673298 674344 R AraC family regulatory protein complement(673298..674344) Burkholderia cenocepacia J2315 6804437 YP_002153998.1 CDS BCAS0616 NC_011002.1 674458 676092 R acyl-CoA synthetase complement(674458..676092) Burkholderia cenocepacia J2315 6804438 YP_002153999.1 CDS BCAS0617 NC_011002.1 676382 677173 D hypothetical protein 676382..677173 Burkholderia cenocepacia J2315 6804439 YP_002154000.1 CDS BCAS0618 NC_011002.1 677292 678383 D AraC family regulatory protein 677292..678383 Burkholderia cenocepacia J2315 6804440 YP_002154001.1 CDS BCAS0619 NC_011002.1 678400 679911 R two-component regulatory system, sensor kinase protein complement(678400..679911) Burkholderia cenocepacia J2315 6804441 YP_002154002.1 CDS BCAS0620 NC_011002.1 679911 680630 R two-component regulatory system, response regulator protein complement(679911..680630) Burkholderia cenocepacia J2315 6804442 YP_002154003.1 CDS BCAS0621 NC_011002.1 680919 681569 R hypothetical protein complement(680919..681569) Burkholderia cenocepacia J2315 6804443 YP_002154004.1 CDS BCAS0622 NC_011002.1 681856 682743 R LysR family regulatory protein complement(681856..682743) Burkholderia cenocepacia J2315 6804444 YP_002154005.1 CDS BCAS0623 NC_011002.1 682857 683627 D putative NAD(P)H dehydrogenase (quinone) 682857..683627 Burkholderia cenocepacia J2315 6804445 YP_002154006.1 CDS BCAS0624 NC_011002.1 683900 684292 R no significant database hits; hypothetical protein complement(683900..684292) Burkholderia cenocepacia J2315 6804446 YP_002154007.1 CDS BCAS0625 NC_011002.1 684888 685691 R putative lipoprotein complement(684888..685691) Burkholderia cenocepacia J2315 6804447 YP_002154008.1 CDS BCAS0626 NC_011002.1 685823 686650 R putative lipoprotein complement(685823..686650) Burkholderia cenocepacia J2315 6804448 YP_002154009.1 CDS BCAS0627 NC_011002.1 686773 687360 R putative lipoprotein complement(686773..687360) Burkholderia cenocepacia J2315 6804449 YP_002154010.1 CDS BCAS0628 NC_011002.1 687780 688382 D TetR family regulatory protein 687780..688382 Burkholderia cenocepacia J2315 6804450 YP_002154011.1 CDS BCAS0629 NC_011002.1 688446 688961 D putative lipoprotein 688446..688961 Burkholderia cenocepacia J2315 6804451 YP_002154012.1 CDS BCAS0630 NC_011002.1 689044 690336 D putative transporter-NRAMP family 689044..690336 Burkholderia cenocepacia J2315 6804452 YP_002154013.1 CDS BCAS0631 NC_011002.1 690367 691371 R putative CheB family methylesterase complement(690367..691371) Burkholderia cenocepacia J2315 6804453 YP_002154014.1 CDS BCAS0632 NC_011002.1 691553 695695 R Similar to Anabaena sp. two-component hybrid sensor and regulator SWALL:Q8YW99 (EMBL:BA000019) (1333 aa) fasta scores: E(): 2.4e-108, 35.34% id in 1341 aa; contains 70 amino acid N terminal extension; hybrid two-component system kinase-response regulator protein complement(691553..695695) Burkholderia cenocepacia J2315 6804454 YP_002154015.1 CDS BCAS0633 NC_011002.1 696325 696606 D no significant database hits; hypothetical protein 696325..696606 Burkholderia cenocepacia J2315 6804455 YP_002154016.1 CDS BCAS0634 NC_011002.1 696702 698009 R putative manganese transport protein, NRAMP family complement(696702..698009) Burkholderia cenocepacia J2315 6804456 YP_002154017.1 CDS BCAS0635 NC_011002.1 698496 699401 D Similar to Lactobacillus plantarum manganese catalase SWALL:MCAT_LACPL (SWALL:P60355) (266 aa) fasta scores: E(): 8.8e-16, 30.99% id in 271 aa; contans 50 amino acid C terminal extension; putative manganese-containing catalase 698496..699401 Burkholderia cenocepacia J2315 6804457 YP_002154018.1 CDS BCAS0636 NC_011002.1 699496 699783 R hypothetical protein complement(699496..699783) Burkholderia cenocepacia J2315 6804458 YP_002154019.1 CDS groEL NC_011002.1 699902 701524 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(699902..701524) Burkholderia cenocepacia J2315 6803980 YP_002154020.1 CDS groES3 NC_011002.1 701605 701922 R 10 kDa chaperonin 3 complement(701605..701922) Burkholderia cenocepacia J2315 6803978 YP_002154021.1 CDS BCAS0639 NC_011002.1 702031 702690 D no significant database hits; hypothetical protein 702031..702690 Burkholderia cenocepacia J2315 6803977 YP_002154022.1 CDS BCAS0640 NC_011002.1 702684 702965 D Similar to Alcaligenes eutrophus hypothetical protein SWALL:Q7WXF5 (EMBL:AY305378) (65 aa) fasta scores: E(): 1e-05, 49.18% id in 61 aa; contains 25 amino acid N terminal extension; hypothetical protein 702684..702965 Burkholderia cenocepacia J2315 6804460 YP_002154023.1 CDS BCAS0641 NC_011002.1 703194 705161 R PAP2 superfamily protein complement(703194..705161) Burkholderia cenocepacia J2315 6804461 YP_002154024.1 CDS BCAS0646A NC_011002.1 709760 710110 R putative DNA-binding protein complement(709760..710110) Burkholderia cenocepacia J2315 6804466 YP_002154025.1 CDS BCAS0648 NC_011002.1 710179 710628 D no significant database hits; hypothetical protein 710179..710628 Burkholderia cenocepacia J2315 6804467 YP_002154026.1 CDS BCAS0649 NC_011002.1 710742 711236 D no significant database hits; hypothetical protein 710742..711236 Burkholderia cenocepacia J2315 6804468 YP_002154027.1 CDS BCAS0650 NC_011002.1 711610 712497 R putative transposase complement(711610..712497) Burkholderia cenocepacia J2315 6804469 YP_002154028.1 CDS BCAS0652 NC_011002.1 713379 714404 D putative transposase 713379..714404 Burkholderia cenocepacia J2315 6804473 YP_002154029.1 CDS BCAS0653 NC_011002.1 714618 715646 D putative transposase 714618..715646 Burkholderia cenocepacia J2315 6804474 YP_002154030.1 CDS BCAS0654 NC_011002.1 715643 716416 D putative IstB-like ATP binding protein 715643..716416 Burkholderia cenocepacia J2315 6804475 YP_002154031.1 CDS BCAS0656 NC_011002.1 716687 717574 D Similar to Escherichia coli transposase insd for insertion element is2a/d/f/h/i/k SWALL:INSD_ECOLI (SWALL:P19777) (301 aa) fasta scores: E(): 1.2e-65, 60.37% id in 265 aa, and to C-terminus from codon 132 of Pseudomonas glumae transposase SWALL:O50654 (EMBL:AB011023) (401 aa) fasta scores: E(): 2.1e-98, 87.45% id in 271 aa; putative transposase 716687..717574 Burkholderia cenocepacia J2315 6804476 YP_002154032.1 CDS BCAS0660 NC_011002.1 719199 719606 R putative transposase complement(719199..719606) Burkholderia cenocepacia J2315 6804479 YP_002154033.1 CDS BCAS0660A NC_011002.1 719764 720060 D putative H-NS family DNA-binding protein 719764..720060 Burkholderia cenocepacia J2315 6804480 YP_002154034.1 CDS BCAS0660B NC_011002.1 720082 720291 D hypothetical protein 720082..720291 Burkholderia cenocepacia J2315 6804481 YP_002154035.1 CDS BCAS0660C NC_011002.1 720304 720507 D no significant database hits; hypothetical protein 720304..720507 Burkholderia cenocepacia J2315 6804482 YP_002154036.1 CDS BCAS0660D NC_011002.1 720572 721036 R hypothetical protein complement(720572..721036) Burkholderia cenocepacia J2315 6804483 YP_002154037.1 CDS BCAS0661A NC_011002.1 721194 722465 R Possible alternative translational start sites; hypothetical protein complement(721194..722465) Burkholderia cenocepacia J2315 6804484 YP_002154038.1 CDS BCAS0661B NC_011002.1 722533 723135 R C-terminus is similar to the C-terminus of Helicobacter hepaticus hypothetical protein hh1587 SWALL:Q7VFT8 (EMBL:AE017148) (181 aa) fasta scores: E(): 7e-05, 32.54% id in 126 aa; hypothetical protein complement(722533..723135) Burkholderia cenocepacia J2315 6804485 YP_002154039.1 CDS BCAS0661C NC_011002.1 723328 723753 R no significant database hits; hypothetical protein complement(723328..723753) Burkholderia cenocepacia J2315 6804486 YP_002154040.1 CDS BCAS0662 NC_011002.1 723823 724347 R hypothetical protein complement(723823..724347) Burkholderia cenocepacia J2315 6804487 YP_002154041.1 CDS BCAS0663 NC_011002.1 724357 728604 R Similar to Escherichia coli RhsB protein precursor rhsB SWALL:RHSB_ECOLI (SWALL:P16917) (1411 aa) fasta scores: E(): 1.7e-36, 28.13% id in 1276 aa; homology does not extend to the C terminus; Similar to Pseudomonas putida rhs-related protein SWALL:Q88I91 (EMBL:AE016785) (1385 aa) fasta scores: E(): 2e-149, 43.97% id in 1312 aa; homology does not extend to the C terminus; RHS-family protein complement(724357..728604) Burkholderia cenocepacia J2315 6804488 YP_002154042.1 CDS BCAS0664 NC_011002.1 728626 729084 R hypothetical protein complement(728626..729084) Burkholderia cenocepacia J2315 6804489 YP_002154043.1 CDS BCAS0665 NC_011002.1 729150 729593 R hypothetical protein complement(729150..729593) Burkholderia cenocepacia J2315 6804490 YP_002154044.1 CDS BCAS0666 NC_011002.1 729637 730506 R putative ankyrin-repeat exported protein complement(729637..730506) Burkholderia cenocepacia J2315 6804491 YP_002154045.1 CDS BCAS0667 NC_011002.1 730506 733505 R hypothetical protein complement(730506..733505) Burkholderia cenocepacia J2315 6804492 YP_002154046.1 CDS BCAS0668 NC_011002.1 733653 735533 R hypothetical protein complement(733653..735533) Burkholderia cenocepacia J2315 6804493 YP_002154047.1 CDS BCAS0669 NC_011002.1 736113 736568 D no significant database hits; hypothetical protein 736113..736568 Burkholderia cenocepacia J2315 6804494 YP_002154048.1 CDS BCAS0670 NC_011002.1 736924 737667 R no significant database hits; hypothetical protein complement(736924..737667) Burkholderia cenocepacia J2315 6804495 YP_002154049.1 CDS BCAS0671 NC_011002.1 738025 738756 R hypothetical protein complement(738025..738756) Burkholderia cenocepacia J2315 6804496 YP_002154050.1 CDS BCAS0672 NC_011002.1 739246 740805 R no significant database hits; hypothetical protein complement(739246..740805) Burkholderia cenocepacia J2315 6804497 YP_002154051.1 CDS BCAS0673 NC_011002.1 741394 741831 R hypothetical protein complement(741394..741831) Burkholderia cenocepacia J2315 6804498 YP_002154052.1 CDS BCAS0674 NC_011002.1 742337 743050 R hypothetical protein complement(742337..743050) Burkholderia cenocepacia J2315 6803998 YP_002154053.1 CDS BCAS0675 NC_011002.1 743063 743749 R hypothetical protein complement(743063..743749) Burkholderia cenocepacia J2315 6803999 YP_002154054.1 CDS BCAS0676 NC_011002.1 743760 744548 R no significant database hits; hypothetical protein complement(743760..744548) Burkholderia cenocepacia J2315 6804000 YP_002154055.1 CDS BCAS0677 NC_011002.1 744788 745204 D hypothetical protein 744788..745204 Burkholderia cenocepacia J2315 6804001 YP_002154056.1 CDS BCAS0678 NC_011002.1 745286 746203 D no significant database hits; hypothetical protein 745286..746203 Burkholderia cenocepacia J2315 6804002 YP_002154057.1 CDS BCAS0679 NC_011002.1 746400 746747 R no significant database hits; hypothetical protein complement(746400..746747) Burkholderia cenocepacia J2315 6804003 YP_002154058.1 CDS BCAS0679A NC_011002.1 747059 747586 R contains low-scoring match to TniQ domain; hypothetical protein complement(747059..747586) Burkholderia cenocepacia J2315 6804004 YP_002154059.1 CDS BCAS0680 NC_011002.1 747564 748433 R putative TniB-like transposition protein complement(747564..748433) Burkholderia cenocepacia J2315 6804005 YP_002154060.1 CDS BCAS0682 NC_011002.1 749472 750497 D putative transposase 749472..750497 Burkholderia cenocepacia J2315 6804009 YP_002154061.1 CDS BCAS0686 NC_011002.1 752396 752794 D hypothetical protein 752396..752794 Burkholderia cenocepacia J2315 6804010 YP_002154062.1 CDS BCAS0687 NC_011002.1 752926 753657 R hypothetical protein complement(752926..753657) Burkholderia cenocepacia J2315 6804011 YP_002154063.1 CDS BCAS0688 NC_011002.1 754095 754643 D Similar to Rhizobium loti probable transcriptional regulator SWALL:Q98ML2 (EMBL:BA000012) (204 aa) fasta scores: E(): 2.5e-07, 30.53% id in 167 aa; homology does not extend to C terminus; N-terminus is similar to the N-terminus of Rhodopseudomonas palustris probable transcriptional regulator TetR family rpa3021 SWALL:CAE28462 (EMBL:BX572602) (195 aa) fasta scores: E(): 5.9e-08, 35.92% id in 103 aa; TetR family regulatory protein 754095..754643 Burkholderia cenocepacia J2315 6804012 YP_002154064.1 CDS BCAS0689 NC_011002.1 754780 755640 D metallo-beta-lactamase superfamily protein 754780..755640 Burkholderia cenocepacia J2315 6804013 YP_002154065.1 CDS BCAS0690 NC_011002.1 755815 757020 D Major Facilitator Superfamily protein 755815..757020 Burkholderia cenocepacia J2315 6804014 YP_002154066.1 CDS BCAS0691 NC_011002.1 757279 757647 D putative LrgA family membrane protein 757279..757647 Burkholderia cenocepacia J2315 6804015 YP_002154067.1 CDS BCAS0692 NC_011002.1 757637 758356 D putative LrgB family membrane protein 757637..758356 Burkholderia cenocepacia J2315 6804016 YP_002154068.1 CDS BCAS0693 NC_011002.1 758459 758746 R putative monooxygenase complement(758459..758746) Burkholderia cenocepacia J2315 6804017 YP_002154069.1 CDS BCAS0694 NC_011002.1 758941 759477 R putative carboxymuconolactone decarboxylase family protein complement(758941..759477) Burkholderia cenocepacia J2315 6804018 YP_002154070.1 CDS BCAS0695 NC_011002.1 759832 760200 R putative putative phospholipid-binding exported protein complement(759832..760200) Burkholderia cenocepacia J2315 6804019 YP_002154071.1 CDS BCAS0697 NC_011002.1 760637 761569 R LysR family regulatory protein complement(760637..761569) Burkholderia cenocepacia J2315 6804020 YP_002154072.1 CDS BCAS0698 NC_011002.1 761709 762716 D putative alcohol dehydrogenase 761709..762716 Burkholderia cenocepacia J2315 6804021 YP_002154073.1 CDS BCAS0699 NC_011002.1 762778 764001 D hypothetical protein 762778..764001 Burkholderia cenocepacia J2315 6804022 YP_002154074.1 CDS BCAS0700 NC_011002.1 764038 764691 D catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; dihydropteridine reductase 764038..764691 Burkholderia cenocepacia J2315 6804023 YP_002154075.1 CDS BCAS0701 NC_011002.1 764764 765684 D hypothetical protein 764764..765684 Burkholderia cenocepacia J2315 6804024 YP_002154076.1 CDS BCAS0702 NC_011002.1 765712 766473 D putative substrate-binding transporter protein 765712..766473 Burkholderia cenocepacia J2315 6804025 YP_002154077.1 CDS BCAS0703 NC_011002.1 766710 767510 D putative short-chain dehydrogenase 766710..767510 Burkholderia cenocepacia J2315 6804026 YP_002154078.1 CDS BCAS0704 NC_011002.1 767567 768328 D putative short-chain dehydrogenase/oxidoreductase 767567..768328 Burkholderia cenocepacia J2315 6804027 YP_002154079.1 CDS BCAS0705 NC_011002.1 768371 769735 D putative pyridine nucleotide-disulphide oxidoreductase 768371..769735 Burkholderia cenocepacia J2315 6804028 YP_002154080.1 CDS BCAS0706 NC_011002.1 770234 771562 D Possible alternative upstream translational start site; Major Facilitator Superfamily protein 770234..771562 Burkholderia cenocepacia J2315 6804029 YP_002154081.1 CDS BCAS0707 NC_011002.1 771602 772246 R two-component regulatory system, response regulator protein complement(771602..772246) Burkholderia cenocepacia J2315 6804030 YP_002154082.1 CDS BCAS0708 NC_011002.1 772243 774141 R Similar to C-terminus of Bradyrhizobium japonicum nodulation protein v NodV or bll1715 SWALL:NODV_BRAJA (SWALL:P15939) (889 aa) fasta scores: E(): 2e-42, 35.11% id in 524 aa; two-component regulatory system, sensor kinase protein complement(772243..774141) Burkholderia cenocepacia J2315 6804031 YP_002154083.1 CDS BCAS0709 NC_011002.1 774171 774551 R two-component regulatory system, response regulator protein complement(774171..774551) Burkholderia cenocepacia J2315 6804032 YP_002154084.1 CDS BCAS0710 NC_011002.1 774710 775726 R LysR family regulatory protein complement(774710..775726) Burkholderia cenocepacia J2315 6804033 YP_002154085.1 CDS BCAS0711 NC_011002.1 776177 778891 R paralogs to the E1 component of pyruvate dehydrogenase subunit E1; 2-oxoacid dehydrogenase subunit E1 complement(776177..778891) Burkholderia cenocepacia J2315 6804034 YP_002154086.1 CDS BCAS0712 NC_011002.1 779052 779591 D AnsC family regulatory protein 779052..779591 Burkholderia cenocepacia J2315 6804035 YP_002154087.1 CDS BCAS0713 NC_011002.1 779876 780709 R short chain dehydrogenase complement(779876..780709) Burkholderia cenocepacia J2315 6804036 YP_002154088.1 CDS BCAS0715 NC_011002.1 780811 781758 D LysR family regulatory protein 780811..781758 Burkholderia cenocepacia J2315 6804037 YP_002154089.1 CDS BCAS0716 NC_011002.1 782388 784805 D Codons 38 to 215 are similar to codon 623 to the C-terminus of Vibrio parahaemolyticus putative transmembrane protein vp0400 SWALL:Q87SM2 (EMBL:AP005074) (271 aa) fasta scores: E(): 6.8e-07, 28.72% id in 188 aa; putative restriction endonuclease 782388..784805 Burkholderia cenocepacia J2315 6804038 YP_002154090.1 CDS BCAS0717 NC_011002.1 785367 788087 D C-terminal region is similar to Photobacterium profundum hypothetical protein. UniProt:Q6LHQ1 (EMBL:CR378679 (715 aa) fasta scores: E()=6.7e-54, 30.143% id in 700 aa; hypothetical protein 785367..788087 Burkholderia cenocepacia J2315 6804039 YP_002154091.1 CDS BCAS0718 NC_011002.1 788645 788908 D transposase 788645..788908 Burkholderia cenocepacia J2315 6804040 YP_002154092.1 CDS BCAS0721 NC_011002.1 790842 791741 R hypothetical protein complement(790842..791741) Burkholderia cenocepacia J2315 6804043 YP_002154093.1 CDS BCAS0722 NC_011002.1 791751 792713 R putative patatin-like phospholipase complement(791751..792713) Burkholderia cenocepacia J2315 6804044 YP_002154094.1 CDS BCAS0723 NC_011002.1 792990 794024 R hypothetical protein complement(792990..794024) Burkholderia cenocepacia J2315 6804045 YP_002154095.1 CDS BCAS0724 NC_011002.1 794956 795486 D C-terminal region is similar to Bradyrhizobium japonicum methionine sulfoxide reductase MsrB UniProt:Q89EM9 (EMBL:BA000040 (139 aa) fasta scores: E()=6.6e-26, 51.095% id in 137 aa; peptide methionine sulfoxide reductase family protein 794956..795486 Burkholderia cenocepacia J2315 6804046 YP_002154096.1 CDS BCAS0725 NC_011002.1 795518 797377 D Similar to Rhizobium meliloti hypothetical protein smb20213 SWALL:Q92WX1 (EMBL:AL591985) (627 aa) fasta scores: E(): 7.6e-70, 61.55% id in 619 aa; N terminal 45 amino acids truncated; putative cytochrome c biogenesis protein 795518..797377 Burkholderia cenocepacia J2315 6804047 YP_002154097.1 CDS BCAS0726 NC_011002.1 797439 798182 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 797439..798182 Burkholderia cenocepacia J2315 6804048 YP_002154098.1 CDS BCAS0727 NC_011002.1 798420 799535 D contains Rieske [2Fe-2S] domain; putative oxidoredutase 798420..799535 Burkholderia cenocepacia J2315 6804049 YP_002154099.1 CDS cdd NC_011002.1 799569 799958 R cytidine deaminase complement(799569..799958) Burkholderia cenocepacia J2315 6804050 YP_002154100.1 CDS deoA NC_011002.1 799984 801300 R Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase complement(799984..801300) Burkholderia cenocepacia J2315 6803969 YP_002154101.1 CDS BCAS0730 NC_011002.1 801334 802608 R putative Na+ dependent nucleoside transporter family protein complement(801334..802608) Burkholderia cenocepacia J2315 6803970 YP_002154102.1 CDS dhT NC_011002.1 802857 804314 R catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase complement(802857..804314) Burkholderia cenocepacia J2315 6804051 YP_002154103.1 CDS BCAS0732 NC_011002.1 804380 805888 R putative cytosine/purines, uracil, thiamine, allantoin permease complement(804380..805888) Burkholderia cenocepacia J2315 6803974 YP_002154104.1 CDS BCAS0733 NC_011002.1 805991 807307 R catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase complement(805991..807307) Burkholderia cenocepacia J2315 6804052 YP_002154105.1 CDS BCAS0734 NC_011002.1 807363 808700 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase complement(807363..808700) Burkholderia cenocepacia J2315 6804053 YP_002154106.1 CDS BCAS0735 NC_011002.1 808828 810108 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(808828..810108) Burkholderia cenocepacia J2315 6804054 YP_002154107.1 CDS BCAS0736 NC_011002.1 810430 811122 D TetR family regulatory protein 810430..811122 Burkholderia cenocepacia J2315 6804055 YP_002154108.1 CDS BCAS0737 NC_011002.1 811231 812421 R contains thiolase domains; putative acetyl-CoA acetyltransferase complement(811231..812421) Burkholderia cenocepacia J2315 6804056 YP_002154109.1 CDS BCAS0738 NC_011002.1 812440 813207 R putative short-chain dehydrogenase family protein complement(812440..813207) Burkholderia cenocepacia J2315 6804057 YP_002154110.1 CDS BCAS0739 NC_011002.1 813221 814888 R putative acetyl-CoA synthetase complement(813221..814888) Burkholderia cenocepacia J2315 6804058 YP_002154111.1 CDS BCAS0740 NC_011002.1 815032 816036 D Similar to Pseudomonas aeruginosa ornithine utilization regulator oruR SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 4.1e-20, 35.17% id in 253 aa; homology doesn't extend to N terminus; AraC family regulatory protein 815032..816036 Burkholderia cenocepacia J2315 6804059 YP_002154112.1 CDS BCAS0741 NC_011002.1 816212 816811 D hypothetical protein 816212..816811 Burkholderia cenocepacia J2315 6804060 YP_002154113.1 CDS BCAS0742 NC_011002.1 816867 817238 D hypothetical protein 816867..817238 Burkholderia cenocepacia J2315 6804061 YP_002154114.1 CDS BCAS0743 NC_011002.1 817379 817843 D putative GNAT family acetyltransferase 817379..817843 Burkholderia cenocepacia J2315 6804062 YP_002154115.1 CDS BCAS0744 NC_011002.1 823865 824335 D Possible alternative translational start site after codon 12; hypothetical protein 823865..824335 Burkholderia cenocepacia J2315 6804603 YP_002154116.1 CDS BCAS0745 NC_011002.1 824488 825165 R hypothetical protein complement(824488..825165) Burkholderia cenocepacia J2315 6804064 YP_002154117.1 CDS BCAS0746 NC_011002.1 825173 825697 R putative metal dependent phosphohydrolase complement(825173..825697) Burkholderia cenocepacia J2315 6804065 YP_002154118.1 CDS BCAS0747 NC_011002.1 825816 829286 R hypothetical protein complement(825816..829286) Burkholderia cenocepacia J2315 6804066 YP_002154119.1 CDS BCAS0748 NC_011002.1 829290 830540 R putative calcineurin-like phosphoesterase family protein complement(829290..830540) Burkholderia cenocepacia J2315 6804067 YP_002154120.1 CDS BCAS0749 NC_011002.1 830890 831660 R putative lipoprotein complement(830890..831660) Burkholderia cenocepacia J2315 6804068 YP_002154121.1 CDS BCAS0750 NC_011002.1 831913 832455 R hypothetical protein complement(831913..832455) Burkholderia cenocepacia J2315 6804069 YP_002154122.1 CDS BCAS0751 NC_011002.1 832897 834882 R family T3 threonine peptidase; putative gamma-glutamyltransferase precursor complement(832897..834882) Burkholderia cenocepacia J2315 6804070 YP_002154123.1 CDS BCAS0752 NC_011002.1 835114 836070 R LysR family regulatory protein complement(835114..836070) Burkholderia cenocepacia J2315 6804071 YP_002154124.1 CDS BCAS0753 NC_011002.1 836173 837297 D hypothetical protein 836173..837297 Burkholderia cenocepacia J2315 6804072 YP_002154125.1 CDS BCAS0754 NC_011002.1 837356 838711 D putative permease 837356..838711 Burkholderia cenocepacia J2315 6804073 YP_002154126.1 CDS BCAS0755 NC_011002.1 838992 839504 D hypothetical protein 838992..839504 Burkholderia cenocepacia J2315 6804074 YP_002154127.1 CDS BCAS0756 NC_011002.1 839584 840519 D putative phage integrase family protein 839584..840519 Burkholderia cenocepacia J2315 6804075 YP_002154128.1 CDS BCAS0757 NC_011002.1 840558 841037 R hypothetical protein complement(840558..841037) Burkholderia cenocepacia J2315 6804076 YP_002154129.1 CDS BCAS0758 NC_011002.1 841034 841489 R hypothetical protein complement(841034..841489) Burkholderia cenocepacia J2315 6804077 YP_002154130.1 CDS BCAS0759 NC_011002.1 842315 855988 D Similar to Burkholderia cenocepacia hypothetical protein SWALL:Q8VP11 (EMBL:AY028431) (4424 aa) fasta scores: E(): 7.1e-106, 31.65% id in 4657 aa; contains extra 550 amino acids in central section of protein; putative peptidoglycan-binding membrane protein 842315..855988 Burkholderia cenocepacia J2315 6804078 YP_002154131.1 CDS BCAS0760 NC_011002.1 856010 856645 R putative metal-dependent phosphohydrolase complement(856010..856645) Burkholderia cenocepacia J2315 6804582 YP_002154132.1 CDS BCAS0761 NC_011002.1 856825 857790 D contains TonB-dependent receptor protein signature 1; AraC family regulatory protein 856825..857790 Burkholderia cenocepacia J2315 6804583 YP_002154133.1 CDS BCAS0762 NC_011002.1 858078 858389 D Similar to Bordetella bronchiseptica hypothetical protein SWALL:Q7WR58 (EMBL:BX640437) (128 aa) fasta scores: E(): 2.7, 40.47% id in 84 aa; hypothetical protein 858078..858389 Burkholderia cenocepacia J2315 6804584 YP_002154134.1 CDS BCAS0763 NC_011002.1 858665 859378 D putative dienelactone hydrolase family protein 858665..859378 Burkholderia cenocepacia J2315 6804585 YP_002154135.1 CDS oprB NC_011002.1 859513 861015 R multidrug efflux system outer membrane protein complement(859513..861015) Burkholderia cenocepacia J2315 6804586 YP_002154136.1 CDS bpeB NC_011002.1 861018 864209 R multidrug efflux system transporter protein complement(861018..864209) Burkholderia cenocepacia J2315 6803985 YP_002154137.1 CDS bpeA NC_011002.1 864225 865463 R multidrug efflux system transport protein complement(864225..865463) Burkholderia cenocepacia J2315 6804662 YP_002154138.1 CDS BCAS0767 NC_011002.1 865688 866569 R Similar to Burkholderia mallei transcriptional regulator, lysr family SWALL:Q62MT9 (EMBL:CP000010) (351 aa) fasta scores: E(): 8.1e-25, 37.84% id in 288 aa; C terminal 50 amino acids truncated; LysR family regulatory protein complement(865688..866569) Burkholderia cenocepacia J2315 6804661 YP_002154139.1 CDS BCAS0768 NC_011002.1 867167 868150 D AraC family regulatory protein 867167..868150 Burkholderia cenocepacia J2315 6804587 YP_002154140.1 CDS BCAS0769 NC_011002.1 868213 869184 R putative periplasmic solute-binding protein complement(868213..869184) Burkholderia cenocepacia J2315 6804588 YP_002154141.1 CDS BCAS0770 NC_011002.1 869465 870415 R LysR family regulatory protein complement(869465..870415) Burkholderia cenocepacia J2315 6804589 YP_002154142.1 CDS BCAS0771 NC_011002.1 870721 872019 R putative adenylosuccinate synthetase complement(870721..872019) Burkholderia cenocepacia J2315 6804590 YP_002154143.1 CDS BCAS0772 NC_011002.1 872160 873065 D LysR family regulatory protein 872160..873065 Burkholderia cenocepacia J2315 6804591 YP_002154144.1 CDS BCAS0773 NC_011002.1 873218 873541 R hypothetical protein complement(873218..873541) Burkholderia cenocepacia J2315 6804592 YP_002154145.1 CDS BCAS0773A NC_011002.1 874877 875062 R no significant database hits; hypothetical protein complement(874877..875062) Burkholderia cenocepacia J2315 6804593 YP_001989038.1 CDS pBCA001 NC_011003.1 1 672 D Similar to Pseudomonas syringae pv. maculicola putative partition protein ParA SWALL:Q93TE7 (EMBL:AF359557) (216 aa) fasta scores: E(): 1.7e-10, 28.44% id in 218 aa, and to Xanthomonas axonopodis partition protein A ParA SWALL:Q8NKZ8 (EMBL:AE008924) (208 aa) fasta scores: E(): 1.6e-11, 31.96% id in 219 aa; putative partition protein 1..672 Burkholderia cenocepacia J2315 6926527 YP_002235439.1 CDS pBCA002 NC_011003.1 765 1637 D Weakly similar to Bacillus subtilis stage 0 sporulation protein J Spo0J SWALL:SP0J_BACSU (SWALL:P26497) (282 aa) fasta scores: E(): 1.1e-07, 29.71% id in 249 aa, and to the C-terminal region of Ralstonia solanacearum putative partitioning protein ParB or rsp0004 or rs01976 SWALL:Q8XTV0 (EMBL:AL646076) (334 aa) fasta scores: E(): 2.1e-13, 28.12% id in 256 aa; putative partitioning protein 765..1637 Burkholderia cenocepacia J2315 6926396 YP_002235440.1 CDS pBCA003 NC_011003.1 2363 3220 D Similar to Escherichia coli p285 protein TrfA SWALL:Q52323 (EMBL:X00713) (285 aa) fasta scores: E(): 5.7e-19, 29.68% id in 283 aa, and to the C-terminal region of Escherichia coli TrfA transcriptional repressor protein SWALL:TRFA_ECOLI (SWALL:P07676) (382 aa) fasta scores: E(): 7.3e-19, 29.68% id in 283 aa; hypothetical protein 2363..3220 Burkholderia cenocepacia J2315 6926397 YP_002235441.1 CDS pBCA004 NC_011003.1 4209 7358 R Similar to the C-terminal region of Staphylococcus aureus DNA polymerase III alpha subunit DnaE SWALL:DP3A_STAAU (SWALL:Q9F1K0) (1065 aa) fasta scores: E(): 6.9e-61, 25.64% id in 1045 aa, and to the full length Pseudomonas aeruginosa probable DNA polymerase alpha chain pa0669 SWALL:Q9I5Q2 (EMBL:AE004502) (1031 aa) fasta scores: E(): 3.6e-188, 52.96% id in 1044 aa; putative DNA polymerase subunit alpha complement(4209..7358) Burkholderia cenocepacia J2315 6926398 YP_002235442.1 CDS pBCA005 NC_011003.1 7365 8843 R Similar to Ralstonia solanacearum hypothetical protein rsp0799 or rs01908 SWALL:Q8XRN2 (EMBL:AL646080) (523 aa) fasta scores: E(): 5.1e-31, 45.61% id in 524 aa, and to Xanthomonas axonopodis hypothetical protein xac1198 SWALL:Q8PN75 (EMBL:AE011749) (472 aa) fasta scores: E(): 1.8e-28, 34% id in 497 aa; hypothetical protein complement(7365..8843) Burkholderia cenocepacia J2315 6926399 YP_002235443.1 CDS pBCA006 NC_011003.1 8764 9480 R Similar to N-terminal region of Ralstonia solanacearum hypothetical protein rsp0798 or rs01909 SWALL:Q8XRN3 (EMBL:AL646080) (272 aa) fasta scores: E(): 5.2e-32, 49.36% id in 235 aa. N-terminal region is similar to many proteins including: Pseudomonas putida putative cell division inhibitor SulA, pp3117 SWALL:AAN68725 (EMBL:AE016785) (206 aa) fasta scores: E(): 1.6e-20, 46.5% id in 200 aa. C-terminal region of the CDS overlaps the down stream CDS; hypothetical protein complement(8764..9480) Burkholderia cenocepacia J2315 6926400 YP_002235444.1 CDS pBCA007 NC_011003.1 9881 11413 D Similar to Serratia marcescens reverse transcriptase RetA SWALL:O52209 (EMBL:AF027768) (495 aa) fasta scores: E(): 2.4e-151, 71.63% id in 497 aa, and to Bradyrhizobium japonicum Blr1915 protein blr1915 SWALL:BAC47180 (EMBL:AP005941) (491 aa) fasta scores: E(): 8.1e-128, 63.24% id in 487 aa; putative maturase-Group II intron 9881..11413 Burkholderia cenocepacia J2315 6926401 YP_002235445.1 CDS pBCA008 NC_011003.1 11469 12431 R Poor database matches. Internal region is weakly similar to the N-terminal region of Bradyrhizobium japonicum Blr2564 protein SWALL:BAC47829 (EMBL:AP005944) (254 aa) fasta scores: E(): 0.0048, 26.25% id in 179 aa; hypothetical protein complement(11469..12431) Burkholderia cenocepacia J2315 6926485 YP_002235446.1 CDS pBCA009 NC_011003.1 13076 13978 R Poor database matches. C-terminus is similar to the C-terminal region of Pseudomonas alcaligenes RepA SWALL:O30879 (EMBL:U88088) (276 aa) fasta scores: E(): 8.8e-21, 40.33% id in 238 aa; hypothetical protein complement(13076..13978) Burkholderia cenocepacia J2315 6926403 YP_002235447.1 CDS pBCA010 NC_011003.1 14316 15089 R Weakly similar to Rhizobium meliloti hypothetical protein SWALL:Q91UR0 (EMBL:AJ304453) (239 aa) fasta scores: E(): 0.01, 24.28% id in 243 aa; hypothetical protein complement(14316..15089) Burkholderia cenocepacia J2315 6926404 YP_002235448.1 CDS pBCA012 NC_011003.1 20224 21036 R hypothetical protein complement(20224..21036) Burkholderia cenocepacia J2315 6926487 YP_002235449.1 CDS pBCA013 NC_011003.1 21075 21347 R Similar to Bradyrhizobium japonicum Blr6028 protein SWALL:Q89HG3 (EMBL:AP005957) (100 aa) fasta scores: E(): 2.5, 35.52% id in 76 aa, and to the N-terminal region of Shewanella oneidensis HlyD family secretion protein so3483 SWALL:Q8EBM7 (EMBL:AE015784) (369 aa) fasta scores: E(): 4.4, 38.02% id in 71 aa; hypothetical protein complement(21075..21347) Burkholderia cenocepacia J2315 6926407 YP_002235450.1 CDS pBCA014 NC_011003.1 21408 21902 R Weakly similar to Proteus vulgaris conserved hypothetical protein Orf137 SWALL:Q8L2A0 (EMBL:AP004237) (151 aa) fasta scores: E(): 0.013, 22.51% id in 151 aa, and to Coxiella burnetii hypothetical protein cbu1865 SWALL:Q83AL8 (EMBL:AE016965) (175 aa) fasta scores: E(): 4.3, 26.75% id in 157 aa; hypothetical protein complement(21408..21902) Burkholderia cenocepacia J2315 6926488 YP_002235451.1 CDS pBCA015 NC_011003.1 21977 22144 R Poor database matches. Weakly similar to the C-terminal region of Streptomyces griseoflavus hypothetical protein GilN SWALL:AAP69592 (EMBL:AY233211) (297 aa) fasta scores: E(): 6.4, 39.21% id in 51 aa; hypothetical protein complement(21977..22144) Burkholderia cenocepacia J2315 6926489 YP_002235452.1 CDS pBCA016 NC_011003.1 22141 23457 R Similar to Rhizobium etli hypothetical protein yp034 SWALL:Q8KL58 (EMBL:U80928) (404 aa) fasta scores: E(): 2.7e-62, 43.21% id in 398 aa, and to Rhizobium loti hypothetical protein mlr9246 SWALL:Q981T1 (EMBL:AP003015) (412 aa) fasta scores: E(): 7.4e-54, 40% id in 395 aa. CDS is extended at the C-terminus in comparison to orthologues; none; hypothetical protein complement(22141..23457) Burkholderia cenocepacia J2315 6926410 YP_002235453.1 CDS pBCA017 NC_011003.1 23454 24866 R N-terminus is similar to the N-terminal regions of Xanthomonas axonopodis hypothetical protein xacb0057 SWALL:Q8PRH5 (EMBL:AE008925) (395 aa) fasta scores: E(): 4.9e-25, 37.7% id in 313 aa, and Pseudomonas alcaligenes hypothetical protein SWALL:Q9XAX4 (EMBL:U88088) (522 aa) fasta scores: E(): 7.5e-23, 30.19% id in 414 aa; hypothetical protein complement(23454..24866) Burkholderia cenocepacia J2315 6926411 YP_002235454.1 CDS pBCA018 NC_011003.1 24877 25143 R hypothetical protein complement(24877..25143) Burkholderia cenocepacia J2315 6926412 YP_002235455.1 CDS pBCA019 NC_011003.1 25685 26167 D hypothetical protein 25685..26167 Burkholderia cenocepacia J2315 6926413 YP_002235456.1 CDS traG NC_011003.1 26157 29195 R Similar to Escherichia coli TraG protein SWALL:TRG1_ECOLI (SWALL:P33790) (938 aa) fasta scores: E(): 4.6e-18, 24.34% id in 916 aa; putative TraG conjugative transfer protein complement(26157..29195) Burkholderia cenocepacia J2315 6926490 YP_002235457.1 CDS traH NC_011003.1 29205 30659 R Similar to Escherichia coli TraH protein precursor SWALL:TRH1_ECOLI (SWALL:P15069) (458 aa) fasta scores: E(): 7.9e-24, 28.44% id in 450 aa; putative TraH conjugative transfer protein complement(29205..30659) Burkholderia cenocepacia J2315 6926491 YP_002235458.1 CDS pBCA022 NC_011003.1 30652 31686 R Similar to Bacteriophage phiE125 conserved hypothetical protein Gp37 SWALL:Q8W6R4 (EMBL:AF447491) (330 aa) fasta scores: E(): 3.2e-52, 58.03% id in 336 aa, and to Sinorhizobium meliloti phage PBC5 hypothetical protein Orf76 SWALL:Q8W6F1 (EMBL:AF448724) (337 aa) fasta scores: E(): 3.9e-11, 34.67% id in 349 aa. CDS is extended at the C-terminus in comparison to orthologues; hypothetical protein complement(30652..31686) Burkholderia cenocepacia J2315 6926522 YP_002235459.1 CDS pBCA023 NC_011003.1 31683 32126 R Similar to Shigella flexneri conserved hypothetical protein sf1348 SWALL:AAN42952 (EMBL:AE015160) (121 aa) fasta scores: E(): 4e-06, 39.7% id in 136 aa, and to the C-teminal region of Salmonella typhi hypothetical protein HCM1.27c SWALL:Q935R5 (EMBL:AL513383) (174 aa) fasta scores: E(): 7.3e-21, 47.36% id in 133 aa; hypothetical protein complement(31683..32126) Burkholderia cenocepacia J2315 6926415 YP_002235460.1 CDS pBCA024 NC_011003.1 32123 32653 R Poor database matches. Weakly similar to an internal region of Escherichia coli DNA primase TraC SWALL:TRC4_ECOLI (SWALL:P27189) (1061 aa) fasta scores: E(): 6.9, 25.8% id in 155 aa; none; hypothetical protein complement(32123..32653) Burkholderia cenocepacia J2315 6926416 YP_002235461.1 CDS traF NC_011003.1 32664 33497 R Similar to Escherichia coli TraF protein precursor SWALL:TRAF_ECOLI (SWALL:P14497) (247 aa) fasta scores: E(): 1.4e-08, 25.83% id in 240 aa, and to Sphingomonas aromaticivorans pilus assembly and synthesis protein precursor TraF SWALL:O85933 (EMBL:AF079317) (270 aa) fasta scores: E(): 3.6e-16, 31.07% id in 280 aa; putative TraF conjugative transfer protein complement(32664..33497) Burkholderia cenocepacia J2315 6926417 YP_002235462.1 CDS pBCA026 NC_011003.1 33502 33891 R hypothetical protein complement(33502..33891) Burkholderia cenocepacia J2315 6926519 YP_002235463.1 CDS pBCA026a NC_011003.1 33888 34196 R hypothetical protein complement(33888..34196) Burkholderia cenocepacia J2315 6926492 YP_002235464.1 CDS pBCA027 NC_011003.1 34456 35700 R TraN; TrhN; involved in stabilizing mating pairs during plasmid conjugation; F plasmid TraN appears to recognize OmpA in the recipient cell; conjugal transfer mating pair stabilization protein TraN complement(34456..35700) Burkholderia cenocepacia J2315 6926419 YP_002235465.1 CDS pBCA028 NC_011003.1 35708 36754 R Weakly similar to the N-terminal region of Escherichia coli TraN protein precursor SWALL:TRAN_ECOLI (SWALL:P24082) (602 aa) fasta scores: E(): 7.4, 22.18% id in 275 aa; hypothetical protein complement(35708..36754) Burkholderia cenocepacia J2315 6926493 YP_002235466.1 CDS pBCA029 NC_011003.1 36831 37163 R Similar to Listeria monocytogenes hypothetical protein lmo2255 SWALL:Q8Y522 (EMBL:AL591982) (88 aa) fasta scores: E(): 0.53, 32.14% id in 84 aa, and to N-terminal region of Klebsiella pneumoniae probable cps biosynthesis glycosyltransferase SWALL:YC14_KLEPN (SWALL:Q48460) (465 aa) fasta scores: E(): 1.5, 30.69% id in 101 aa. Possible alternative translational start site; hypothetical protein complement(36831..37163) Burkholderia cenocepacia J2315 6926421 YP_002235467.1 CDS pBCA030 NC_011003.1 37210 37911 R Similar to Sphingomonas aromaticivorans sex pilus assembly and mating pair formation protein precursor TrbC SWALL:O85936 (EMBL:AF079317) (254 aa) fasta scores: E(): 8.5e-08, 28.5% id in 214 aa. C-terminus is similar to the C-terminal region of Escherichia coli periplasmic protein TrbC precursor trbC SWALL:TRBC_ECOLI (SWALL:P18473) (212 aa) fasta scores: E(): 0.0006, 30.51% id in 154 aa; putative conjugative transfer protein complement(37210..37911) Burkholderia cenocepacia J2315 6926494 YP_002235468.1 CDS traU NC_011003.1 37908 38918 R Similar to Escherichia coli TraU protein precursor SWALL:TRAU_ECOLI (SWALL:P18471) (330 aa) fasta scores: E(): 1.8e-56, 42.13% id in 337 aa; putative TraU conjugative transfer protein precursor complement(37908..38918) Burkholderia cenocepacia J2315 6926495 YP_002235469.1 CDS traW NC_011003.1 38915 39553 R Similar to Escherichia coli TraW protein precursor SWALL:TRAW_ECOLI (SWALL:P18472) (210 aa) fasta scores: E(): 2.8e-17, 35.46% id in 203 aa; putative TraW conjugative transfer protein precursor complement(38915..39553) Burkholderia cenocepacia J2315 6926524 YP_002235470.1 CDS pBCA033 NC_011003.1 39540 40070 R Similar to Rhizobium loti plasmid transfer protein, TraF mlr6188 SWALL:Q98A24 (EMBL:AP003008) (182 aa) fasta scores: E(): 0.00011, 30% id in 170 aa. C-terminus is similar to C-terminal region Bacillus subtilis signal peptidase I t sipt or bsu14410 SWALL:LEPT_BACSU (SWALL:P71013) (193 aa) fasta scores: E(): 0.0029, 32.52% id in 123 aa; putative peptidase protein complement(39540..40070) Burkholderia cenocepacia J2315 6926526 YP_002235471.1 CDS pBCA034 NC_011003.1 40088 40258 R Similar to Ralstonia solanacearum putative transmembrane protein rsc1615 or rs03978 SWALL:Q8XYZ1 (EMBL:AL646065) (55 aa) fasta scores: E(): 1.4, 30% id in 50 aa; hypothetical protein complement(40088..40258) Burkholderia cenocepacia J2315 6926496 YP_002235472.1 CDS pBCA035 NC_011003.1 40284 41036 R Similar to Agrobacterium tumefaciens transcriptional regulator, GntR family atu3226 or agr_l_3177 SWALL:Q8UAZ1 (EMBL:AE009252) (244 aa) fasta scores: E(): 3.6e-11, 32.73% id in 223 aa, and to Rhizobium meliloti putative transcriptional regulator, GntR family protein rb1031 or smb21591 SWALL:Q92UR2 (EMBL:AL603645) (244 aa) fasta scores: E(): 7.3e-12, 33.5% id in 194 aa; GntR family regulatory protein complement(40284..41036) Burkholderia cenocepacia J2315 6926497 YP_002235473.1 CDS pBCA036 NC_011003.1 41110 41688 R Similar to Citrobacter freundii Nuc protein SWALL:Q8GFV6 (EMBL:AF550415) (183 aa) fasta scores: E(): 1.9e-18, 41.8% id in 177 aa, and to Pseudomonas putida putative nuclease SWALL:Q847E6 (EMBL:AF491307) (201 aa) fasta scores: E(): 3.4e-32, 56.42% id in 179 aa; hypothetical protein complement(41110..41688) Burkholderia cenocepacia J2315 6926426 YP_002235474.1 CDS pBCA037 NC_011003.1 41719 42084 R Poor database matches. Weakly similar to an internal region of Podospora anserina NADH-ubiquinone oxidoreductase chain 2 ND2 SWALL:NU2M_PODAN (SWALL:P15578) (556 aa) fasta scores: E(): 4.9, 24.32% id in 111 aa; hypothetical protein complement(41719..42084) Burkholderia cenocepacia J2315 6926498 YP_002235475.1 CDS pBCA037a NC_011003.1 42081 42473 R hypothetical protein complement(42081..42473) Burkholderia cenocepacia J2315 6926499 YP_002235476.1 CDS pBCA038 NC_011003.1 42470 42856 R Weakly siimilar to Brucella suis transcriptional regulator, Ros/MucR family br0569 SWALL:Q8G1Y2 (EMBL:AE014365) (142 aa) fasta scores: E(): 1.9, 26.01% id in 123 aa, and to Brucella melitensis transcriptional regulatory protein bmei1364 SWALL:Q8YFZ8 (EMBL:AE009574) (161 aa) fasta scores: E(): 2.5, 26.01% id in 123 aa; hypothetical protein complement(42470..42856) Burkholderia cenocepacia J2315 6926429 YP_002235477.1 CDS pBCA039 NC_011003.1 43555 43878 D hypothetical protein 43555..43878 Burkholderia cenocepacia J2315 6926430 YP_002235478.1 CDS pBCA040 NC_011003.1 43839 44243 D No significant database matches. N-terminus overlaps the C-terminal region of pBS039; hypothetical protein 43839..44243 Burkholderia cenocepacia J2315 6926431 YP_002235479.1 CDS traC NC_011003.1 44330 46936 R Similar to Escherichia coli TraC protein SWALL:TRAC_ECOLI (SWALL:P18004) (875 aa) fasta scores: E(): 3.3e-45, 25.08% id in 849 aa, and to Sphingomonas aromaticivorans sex pilus assembly and synthesis protein TraC SWALL:O85942 (EMBL:AF079317) (856 aa) fasta scores: E(): 1.1e-66, 29% id in 855 aa; putative TraC conjugative transfer protein complement(44330..46936) Burkholderia cenocepacia J2315 6926432 YP_002235480.1 CDS pBCA042 NC_011003.1 46939 47466 R hypothetical protein complement(46939..47466) Burkholderia cenocepacia J2315 6926515 YP_002235481.1 CDS pBCA043 NC_011003.1 47598 48392 R Similar to Escherichia coli, and Escherichia coli O157:H7 thiol:disulfide interchange protein dsbc precursor DsbC or XprA or b2893 or z4231 or ecs3765 SWALL:DSBC_ECOLI (SWALL:P21892) (236 aa) fasta scores: E(): 1.1e-14, 29.13% id in 230 aa; none; thiol:disulfide interchange protein DsbC precursor complement(47598..48392) Burkholderia cenocepacia J2315 6926433 YP_002235482.1 CDS traB NC_011003.1 48385 49818 R Similar to Escherichia coli TraB protein SWALL:TRB1_ECOLI (SWALL:P41067) (475 aa) fasta scores: E(): 9.2e-13, 26.57% id in 444 aa; putative TraB conjugative transfer protein complement(48385..49818) Burkholderia cenocepacia J2315 6926500 YP_002235483.1 CDS pBCA045 NC_011003.1 49811 50557 R Similar to Salmonella typhi TraK protein SWALL:Q8KNL8 (EMBL:AF411480) (246 aa) fasta scores: E(): 0.29, 21.9% id in 242 aa. N-terminus is similar to an internal region of Escherichia coli hypothetical protein YafA or b0239 SWALL:YAFA_ECOLI (SWALL:P04335) (414 aa) fasta scores: E(): 1.8, 30.53% id in 131 aa N-terminus overlaps the C-terminal region of pBS044; hypothetical protein complement(49811..50557) Burkholderia cenocepacia J2315 6926501 YP_002235484.1 CDS traE NC_011003.1 50496 51086 R Similar to Escherichia coli TraE protein SWALL:TRE1_ECOLI (SWALL:P08322) (188 aa) fasta scores: E(): 7e-05, 25% id in 136 aa; putative TraE conjugative transfer protein complement(50496..51086) Burkholderia cenocepacia J2315 6926502 YP_002235485.1 CDS pBCA047 NC_011003.1 51093 51386 R Weakly similar to Pseudomonas resinovorans putative pillus assembly protein TrhL SWALL:BAC41647 (EMBL:AB088420) (95 aa) fasta scores: E(): 0.017, 29.21% id in 89 aa, and to Vibrio cholerae sex pilus assembly protein TraL SWALL:Q8KQX8 (EMBL:AY055428) (95 aa) fasta scores: E(): 0.0094, 26.43% id in 87 aa; hypothetical protein complement(51093..51386) Burkholderia cenocepacia J2315 6926503 YP_002235486.1 CDS pBCA048 NC_011003.1 51400 51792 R Poor database matches. Internal region is similar to the N-terminus of Pseudomonas aeruginosa hypothetical protein PA2110 SWALL:Q9I205 (EMBL:AE004638) (313 aa) fasta scores: E(): 0.8, 36.2% id in 58 aa; none; hypothetical protein complement(51400..51792) Burkholderia cenocepacia J2315 6926504 YP_002235487.1 CDS pBCA048a NC_011003.1 51821 52165 R hypothetical protein complement(51821..52165) Burkholderia cenocepacia J2315 6926505 YP_002235488.1 CDS pBCA049 NC_011003.1 52162 52638 R Similar to Shigella flexneri ipgF protein precursor IpgF or cp0135 SWALL:IPGF_SHIFL (SWALL:Q07568) (152 aa) fasta scores: E(): 2e-11, 35.33% id in 133 aa, and to Escherichia coli hypothetical protein SWALL:Q9AJ25 (EMBL:AF200363) (152 aa) fasta scores: E(): 6.6e-17, 40.39% id in 151 aa; putative transglycosylase protein complement(52162..52638) Burkholderia cenocepacia J2315 6926506 YP_002235489.1 CDS pBCA050 NC_011003.1 53073 53345 R Poor database matches. Similar to the C-terminal region of Xanthomonas axonopodis hypothetical protein XACB0048 SWALL:Q8PRI4 (EMBL:AE008925) (118 aa) fasta scores: E(): 0.35, 32.25% id in 62 aa; hypothetical protein complement(53073..53345) Burkholderia cenocepacia J2315 6926507 YP_002235490.1 CDS pBCA051 NC_011003.1 53467 54237 R Similar to Ralstonia solanacearum hypothetical protein rsc2169 or rs01430 SWALL:Q8XXE5 (EMBL:AL646068) (247 aa) fasta scores: E(): 3.7e-41, 50% id in 244 aa, and to Yersinia pestis hypothetical protein ypo2700 or y1276 SWALL:Q8ZD89 (EMBL:AJ414153) (245 aa) fasta scores: E(): 3.6e-37, 48.01% id in 227 aa; LamB/YcsF family protein complement(53467..54237) Burkholderia cenocepacia J2315 6926440 YP_002235491.1 CDS pBCA052 NC_011003.1 54224 54460 R Weakly similar to the N-terminal region of Candidatus Tremblaya princeps hypothetical protein SWALL:Q8KTR1 (EMBL:AF481102) (230 aa) fasta scores: E(): 4.3, 29.76% id in 84 aa; hypothetical protein complement(54224..54460) Burkholderia cenocepacia J2315 6926441 YP_002235492.1 CDS pBCA053 NC_011003.1 54457 55497 R Similar to Bradyrhizobium japonicum Blr5140 protein SWALL:BAC50405 (EMBL:AP005953) (365 aa) fasta scores: E(): 2.2e-29, 37.1% id in 318 aa, and to Ralstonia solanacearum putative signal peptide protein rsc2510 or rs01072 SWALL:Q8XWG4 (EMBL:AL646070) (338 aa) fasta scores: E(): 1e-28, 34.53% id in 304 aa; putative extracellular solute-binding protein complement(54457..55497) Burkholderia cenocepacia J2315 6926508 YP_002235493.1 CDS pBCA054 NC_011003.1 55620 56648 R No significant database matches to the full length CDS. C-terminal region is similar to Ralstonia solanacearum transcriptional activator protein SolR SWALL:SLR2_RALSO (SWALL:O30919) (236 aa) fasta scores: E(): 0.3, 24.35% id in 234 aa, and to Agrobacterium tumefaciens LuxR family transcriptional regulator atu2727 or agr_c_4942 SWALL:Q8UBX2 (EMBL:AE009219) (267 aa) fasta scores: E(): 0.29, 27.43% id in 277 aa. Possible alternative translational start site.; LuxR family regulatory protein complement(55620..56648) Burkholderia cenocepacia J2315 6926509 YP_002235494.1 CDS pBCA055 NC_011003.1 56660 58906 R C-terminal region is weakly similar to an internal region of Bradyrhizobium japonicum Bll8156 protein SWALL:BAC53421 (EMBL:AP005964) (828 aa) fasta scores: E(): 2e-16, 24.27% id in 725 aa. Internal region is weakly similar to Ralstonia solanacearum probable transmembrane protein rsp1524 or rs04801 SWALL:Q8XPW2 (EMBL:AL646085) (505 aa) fasta scores: E(): 9e-23, 27.37% id in 453 aa; hypothetical protein complement(56660..58906) Burkholderia cenocepacia J2315 6926444 YP_002235495.1 CDS pBCA056 NC_011003.1 59357 59713 R hypothetical protein complement(59357..59713) Burkholderia cenocepacia J2315 6926510 YP_002235496.1 CDS pBCA057 NC_011003.1 59726 62545 R N-terminal region is similar to the N-terminal regions of Escherichia coli TraI protein SWALL:TRI2_ECOLI (SWALL:P22706) (1756 aa) fasta scores: E(): 2.4e-29, 27.03% id in 899 aa, and Escherichia coli TrwC protein SWALL:Q47673 (EMBL:X63150) (966 aa) fasta scores: E(): 1.6e-37, 33.5% id in 967 aa; putative conjugative transfer protein complement(59726..62545) Burkholderia cenocepacia J2315 6926446 YP_002235497.1 CDS traD NC_011003.1 63145 65064 R Similar to N-terminal regions of Escherichia coli TraD protein SWALL:TRD2_ECOLI (SWALL:P22708) (738 aa) fasta scores: E(): 3.9e-43, 27.33% id in 633 aa, and to plasmid R100 TraD protein SWALL:BAA78884 (EMBL:AP000342) (738 aa) fasta scores: E(): 3.9e-43, 27.33% id in 633 aa; putative TraD conjugative transfer protein complement(63145..65064) Burkholderia cenocepacia J2315 6926511 YP_002235498.1 CDS pBCA060 NC_011003.1 65061 65489 R hypothetical protein complement(65061..65489) Burkholderia cenocepacia J2315 6926512 YP_002235499.1 CDS pBCA061 NC_011003.1 66524 66883 D Doubtful CDS. No significant database matches; hypothetical protein 66524..66883 Burkholderia cenocepacia J2315 6926449 YP_002235500.1 CDS pBCA062 NC_011003.1 66901 67395 D hypothetical protein 66901..67395 Burkholderia cenocepacia J2315 6926450 YP_002235501.1 CDS pBCA063 NC_011003.1 67697 67861 R Similar to Salmonella typhi hypothetical protein r0155 SWALL:Q9L5I7 (EMBL:AF250878) (55 aa) fasta scores: E(): 0.00019, 42.59% id in 54 aa; hypothetical protein complement(67697..67861) Burkholderia cenocepacia J2315 6926451 YP_002235502.1 CDS pBCA064 NC_011003.1 67896 68192 R Doubtful CDS. No significant database matches; hypothetical protein complement(67896..68192) Burkholderia cenocepacia J2315 6926452 YP_002235503.1 CDS pBCA065 NC_011003.1 68247 68468 R Similar to Ralstonia solanacearum hypothetical protein rsc3357 or rs02632 SWALL:Q8XU37 (EMBL:AL646074) (75 aa) fasta scores: E(): 2.7e-08, 53.73% id in 67 aa; hypothetical protein complement(68247..68468) Burkholderia cenocepacia J2315 6926513 YP_002235504.1 CDS pBCA066 NC_011003.1 68515 68796 R Poor database matches. Weakly similar to Homo sapiens prepro-alpha-1 collagen precursor COL1A1 SWALL:Q15201 (EMBL:X00820) (181 aa) fasta scores: E(): 4.4, 26.37% id in 91 aa; hypothetical protein complement(68515..68796) Burkholderia cenocepacia J2315 6926454 YP_002235505.1 CDS pBCA067 NC_011003.1 68852 69112 R hypothetical protein complement(68852..69112) Burkholderia cenocepacia J2315 6926455 YP_002235506.1 CDS pBCA068 NC_011003.1 70128 72257 R Similar to Ralstonia oxalatica hypothetical protein SWALL:CAD61121 (EMBL:AJ536756) (690 aa) fasta scores: E(): 4.1e-69, 39.31% id in 725 aa, and to Bradyrhizobium japonicum Bll0065 protein SWALL:BAC45330 (EMBL:AP005935) (712 aa) fasta scores: E(): 2.7e-43, 34.91% id in 676 aa; ParB-like nuclease domain protein complement(70128..72257) Burkholderia cenocepacia J2315 6926456 YP_002235507.1 CDS pBCA069 NC_011003.1 72957 73214 R hypothetical protein complement(72957..73214) Burkholderia cenocepacia J2315 6926457 YP_002235508.1 CDS pBCA070 NC_011003.1 73199 73366 R hypothetical protein complement(73199..73366) Burkholderia cenocepacia J2315 6926458 YP_002235509.1 CDS pBCA071 NC_011003.1 73416 73922 R none; No significant database matches; hypothetical protein complement(73416..73922) Burkholderia cenocepacia J2315 6926459 YP_002235510.1 CDS pBCA072 NC_011003.1 73946 74599 R Similar to Escherichia coli putative methyltransferase YfeA SWALL:Q9S4X2 (EMBL:AF106329) (227 aa) fasta scores: E(): 4.1e-48, 61.35% id in 207 aa, and to Yersinia pestis putative DNA methylase YPMT1.64c or y5181 or y1085 SWALL:Q9R3Z4 (EMBL:AL117211) (225 aa) fasta scores: E(): 9.7e-48, 60.87% id in 207 aa; putative methyltransferase complement(73946..74599) Burkholderia cenocepacia J2315 6926460 YP_002235511.1 CDS pBCA073 NC_011003.1 75049 75510 R Poor database matches. Weakly similar to the N-terminal region of Streptomyces coelicolor puative turgor pressure regulator KdpE or sco5872 or sc2e9.13 SWALL:O54138 (EMBL:AL939125) (227 aa) fasta scores: E(): 7.6, 26.11% id in 157 aa; hypothetical protein complement(75049..75510) Burkholderia cenocepacia J2315 6926461 YP_002235512.1 CDS pBCA074 NC_011003.1 75622 75906 R hypothetical protein complement(75622..75906) Burkholderia cenocepacia J2315 6926462 YP_002235513.1 CDS pBCA075 NC_011003.1 75927 76592 R Poor database matches. C-terminal region is weakly similar to Xylella fastidiosa hypothetical protein xf2086 SWALL:Q9PBQ4 (EMBL:AE004024) (197 aa) fasta scores: E(): 0.00084, 26.77% id in 183 aa. Possible alternative translational start site; hypothetical protein complement(75927..76592) Burkholderia cenocepacia J2315 6926463 YP_002235514.1 CDS pBCA076 NC_011003.1 76666 77493 R Similar to Ralstonia oxalatica hypothetical protein SWALL:CAD61120 (EMBL:AJ536756) (275 aa) fasta scores: E(): 3.4e-72, 63.86% id in 274 aa, and to Pseudomonas aeruginosa conserved hypothetical protein SWALL:AAN62307 (EMBL:AF440524) (275 aa) fasta scores: E(): 1.9e-70, 63.86% id in 274 aa; hypothetical protein complement(76666..77493) Burkholderia cenocepacia J2315 6926464 YP_002235515.1 CDS pBCA077 NC_011003.1 77554 77685 R Similar to Ralstonia solanacearum hypothetical protein rsp0728 or rs01700 SWALL:Q8XRV3 (EMBL:AL646080) (39 aa) fasta scores: E(): 5e-08, 65.71% id in 35 aa; hypothetical protein complement(77554..77685) Burkholderia cenocepacia J2315 6926465 YP_002235516.1 CDS pBCA078 NC_011003.1 78160 78624 D Poor database matches. Weakly similar to the N-terminal region of Rhizobium meliloti hypothetical protein SWALL:Q9AGT8 (EMBL:AF327371) (197 aa) fasta scores: E(): 0.02, 28.83% id in 163 aa; hypothetical protein 78160..78624 Burkholderia cenocepacia J2315 6926466 YP_002235517.1 CDS pBCA079 NC_011003.1 79219 79515 R hypothetical protein complement(79219..79515) Burkholderia cenocepacia J2315 6926467 YP_002235518.1 CDS pBCA080 NC_011003.1 79541 79750 R hypothetical protein complement(79541..79750) Burkholderia cenocepacia J2315 6926468 YP_002235519.1 CDS pBCA083 NC_011003.1 81121 81384 D Highly similar to Burkholderia cepacia insertion element IS407 hypothetical 10.0 kDa protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 7e-32, 98.85% id in 87 aa, and Ralstonia solanacearum ISRso14-transposase OrfA protein SWALL:Q8XGL4 (EMBL:AL646083) (87 aa) fasta scores: E(): 2.2e-29, 93.1% id in 87 aa; putative insertion element protein 81121..81384 Burkholderia cenocepacia J2315 6926471 YP_002235520.1 CDS pBCA084 NC_011003.1 <81408 82241 D submitted as non partial; Similar to Xanthomonas campestris IS1477 transposase xcc1455 SWALL:Q8PAM6 (EMBL:AE012246) (337 aa) fasta scores: E(): 1.1e-67, 56.7% id in 328 aa. C-terminal region is similar to Ralstonia solanacearum ISRso14-transposase OrfB protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 3.4e-91, 87.17% id in 273 aa; putative transposase-related protein <81408..82241 Burkholderia cenocepacia J2315 6926472 YP_002235521.1 CDS pBCA086 NC_011003.1 83136 83984 D Similar to Bacillus subtilis UDP-N-acetylenolpyruvoylglucosamine reductase MurB or bsu15230 SWALL:MURB_BACSU (SWALL:P18579) (303 aa) fasta scores: E(): 1.7e-17, 28.88% id in 277 aa, and to Thermoanaerobacter tengcongensis UDP-N-acetylenolpyruvoylglucosamine reductase murb or tte1836 SWALL:Q8R8Z6 (EMBL:AE013135) (302 aa) fasta scores: E(): 3.7e-22, 32.02% id in 281 aa. CDS is truncated at the N-terminus in comparison to orthologues; putative UDP-N-acetylenolpyruvoylglucosamine reductase 83136..83984 Burkholderia cenocepacia J2315 6926474 YP_002235522.1 CDS pBCA087 NC_011003.1 84017 84730 D Similar to Bradyrhizobium japonicum Bll6480 protein SWALL:BAC51745 (EMBL:AP005958) (234 aa) fasta scores: E(): 3e-21, 33.62% id in 232 aa, and to Brucella melitensis hypothetical protein bmei0629 SWALL:Q8YI16 (EMBL:AE009505) (228 aa) fasta scores: E(): 1.1e-12, 28.89% id in 218 aa; NUDIX hydrolase family protein 84017..84730 Burkholderia cenocepacia J2315 6926475 YP_002235523.1 CDS pBCA088 NC_011003.1 84777 85931 D Poor database matches. Weakly similar to the N-terminal region of Bacillus subtilis adenine deaminase AdeC or Ade or bsu14520 SWALL:ADEC_BACSU (SWALL:P39761) (577 aa) fasta scores: E(): 4.9, 22.25% id in 355 aa; amidohydrolase family protein 84777..85931 Burkholderia cenocepacia J2315 6926476 YP_002235524.1 CDS pBCA089 NC_011003.1 85933 86487 R Similar to Xanthomonas axonopodis hypothetical protein xaca0025 SWALL:Q8PRN3 (EMBL:AE008924) (183 aa) fasta scores: E(): 1.2e-23, 39.77% id in 176 aa, and to Pseudomonas resinovorans hypothetical protein SWALL:Q8G8R1 (EMBL:AB088420) (197 aa) fasta scores: E(): 1.3e-19, 36.95% id in 184 aa; hypothetical protein complement(85933..86487) Burkholderia cenocepacia J2315 6926477 YP_002235525.1 CDS pBCA090 NC_011003.1 <86986 88797 R submitted as non partial; C-terminal region is similar to Escherichia coli, and Escherichia coli O6 integrase/recombinase XerD or XprB or b2894 or c3474 SWALL:XERD_ECOLI (SWALL:P21891) (298 aa) fasta scores: E(): 0.41, 25% id in 368 aa. Full length CDS is similar to Ralstonia solanacearum putative integrase/recombinase protein rsp0902 or rs01673 SWALL:Q8XRF2 (EMBL:AL646081) (566 aa) fasta scores: E(): 4.5e-22, 31.33% id in 600 aa. Possible alternative translational start site; putative integrase complement(<86986..88797) Burkholderia cenocepacia J2315 6926479 YP_002235526.1 CDS pBCA091 NC_011003.1 89271 89600 R hypothetical protein complement(89271..89600) Burkholderia cenocepacia J2315 6926480 YP_002235527.1 CDS pBCA092 NC_011003.1 89748 90107 R Poor database matches. Similar to the C-terminal region of Streptococcus pneumoniae IS630-SPN1, transposase sp2014 and sp0016 SWALL:Q97CV1 (EMBL:AE007490) (112 aa) fasta scores: E(): 6.2, 26.41% id in 106 aa; hypothetical protein complement(89748..90107) Burkholderia cenocepacia J2315 6926481 YP_002235528.1 CDS pBCA093 NC_011003.1 90407 90817 R Similar to Rhizobium loti nitrogen regulatory protein NtrR mll1670 SWALL:Q98K22 (EMBL:AP002998) (132 aa) fasta scores: E(): 1.5e-21, 53.48% id in 129 aa, and to Pseudomonas syringae plasmid stability protein StbB or psptob0018 SWALL:STBB_PSESM (SWALL:Q52562) (139 aa) fasta scores: E(): 0.047, 32.37% id in 139 aa; PIN domain protein complement(90407..90817) Burkholderia cenocepacia J2315 6926482 YP_002235529.1 CDS pBCA094 NC_011003.1 90814 91056 R Similar to Salmonella dublin virulence-associated protein VagC SWALL:VAGC_SALDU (SWALL:Q05459) (76 aa) fasta scores: E(): 0.0099, 39.34% id in 61 aa, and to Rhizobium meliloti NtrP protein r02417 or smc03949 SWALL:Q9L381 (EMBL:AJ277847) (90 aa) fasta scores: E(): 5e-13, 54.11% id in 85 aa; hypothetical protein complement(90814..91056) Burkholderia cenocepacia J2315 6926483 YP_002235530.1 CDS pBCA095 NC_011003.1 91177 92208 R Similar to Pseudomonas putida putative ligase SWALL:Q8VMP4 (EMBL:AJ344068) (316 aa) fasta scores: E(): 3.6e-52, 45.62% id in 320 aa, and to an internal region Pseudomonas aeruginosa probable ATP-dependent DNA ligase pa2138 SWALL:Q9I1X7 (EMBL:AE004641) (840 aa) fasta scores: E(): 1.3e-53, 45.69% id in 337 aa; putative ligase complement(91177..92208) Burkholderia cenocepacia J2315 6926484 BCALr0080 tRNA BCALr0080 NC_011000.1 100299 100374 D tRNA-Arg 100299..100374 Burkholderia cenocepacia J2315 6930729 BCALr0164 tRNA BCALr0164 NC_011000.1 187935 188010 D tRNA-Ala 187935..188010 Burkholderia cenocepacia J2315 6930791 BCALr0217b tRNA BCALr0217b NC_011000.1 247890 247966 D tRNA-Ile 247890..247966 Burkholderia cenocepacia J2315 6930837 BCALr0217c tRNA BCALr0217c NC_011000.1 248006 248081 D tRNA-Ala 248006..248081 Burkholderia cenocepacia J2315 6933334 BCALr0218a tRNA BCALr0218a NC_011000.1 253677 253762 D tRNA-Tyr 253677..253762 Burkholderia cenocepacia J2315 6930838 BCALr0218b tRNA BCALr0218b NC_011000.1 253806 253879 D tRNA-Gly 253806..253879 Burkholderia cenocepacia J2315 6933336 BCALr0218c tRNA BCALr0218c NC_011000.1 253902 253976 D tRNA-Thr 253902..253976 Burkholderia cenocepacia J2315 6933337 BCALr00219 tRNA BCALr00219 NC_011000.1 255293 255368 D tRNA-Trp 255293..255368 Burkholderia cenocepacia J2315 6934209 BCALr0332 tRNA BCALr0332 NC_011000.1 360342 360417 D tRNA-Thr 360342..360417 Burkholderia cenocepacia J2315 6930878 BCALr0409b tRNA BCALr0409b NC_011000.1 446119 446195 D tRNA-Ile 446119..446195 Burkholderia cenocepacia J2315 6933921 BCALr0409c tRNA BCALr0409c NC_011000.1 446234 446309 D tRNA-Ala 446234..446309 Burkholderia cenocepacia J2315 6933341 BCALr0457 tRNA BCALr0457 NC_011000.1 505607 505682 R tRNA-Lys complement(505607..505682) Burkholderia cenocepacia J2315 6930979 BCALr0472 tRNA BCALr0472 NC_011000.1 523144 523219 D tRNA-Phe 523144..523219 Burkholderia cenocepacia J2315 6930991 216591000014 tRNA 216591000014 NC_011000.1 872807 872883 R tRNA-Gln complement(872807..872883) Burkholderia cenocepacia J2315 BCALr0949 tRNA BCALr0949 NC_011000.1 1036538 1036614 R tRNA-Met complement(1036538..1036614) Burkholderia cenocepacia J2315 6931346 BCALr0970a tRNA BCALr0970a NC_011000.1 1058403 1058478 R tRNA-Asn complement(1058403..1058478) Burkholderia cenocepacia J2315 6931362 BCALr0970b tRNA BCALr0970b NC_011000.1 1058552 1058627 R tRNA-Asn complement(1058552..1058627) Burkholderia cenocepacia J2315 6933347 BCALr1019a tRNA BCALr1019a NC_011000.1 1105662 1105737 D tRNA-Gly 1105662..1105737 Burkholderia cenocepacia J2315 6933949 BCALr1019b tRNA BCALr1019b NC_011000.1 1105790 1105865 D tRNA-Gly 1105790..1105865 Burkholderia cenocepacia J2315 6933349 BCALr1019c tRNA BCALr1019c NC_011000.1 1105917 1105992 D tRNA-Gly 1105917..1105992 Burkholderia cenocepacia J2315 6933350 BCALr1019d tRNA BCALr1019d NC_011000.1 1106092 1106165 D tRNA-Cys 1106092..1106165 Burkholderia cenocepacia J2315 6933351 BCALr1279 tRNA BCALr1279 NC_011000.1 1393432 1393508 R tRNA-Pro complement(1393432..1393508) Burkholderia cenocepacia J2315 6931599 BCALr1290 tRNA BCALr1290 NC_011000.1 1402826 1402902 D tRNA-Arg 1402826..1402902 Burkholderia cenocepacia J2315 6931608 BCALr1480 tRNA BCALr1480 NC_011000.1 1637057 1637133 D tRNA-Val 1637057..1637133 Burkholderia cenocepacia J2315 6934031 BCALr1492 tRNA BCALr1492 NC_011000.1 1651094 1651170 D tRNA-Pro 1651094..1651170 Burkholderia cenocepacia J2315 6931776 BCALr1551a tRNA BCALr1551a NC_011000.1 1719966 1720052 R tRNA-Leu complement(1719966..1720052) Burkholderia cenocepacia J2315 6931827 BCALr1551b tRNA BCALr1551b NC_011000.1 1720299 1720385 R tRNA-Leu complement(1720299..1720385) Burkholderia cenocepacia J2315 6933359 BCALr1552 tRNA BCALr1552 NC_011000.1 1721674 1721760 R tRNA-Leu complement(1721674..1721760) Burkholderia cenocepacia J2315 6931828 BCALr1614 tRNA BCALr1614 NC_011000.1 1772132 1772208 R tRNA-Met complement(1772132..1772208) Burkholderia cenocepacia J2315 6931885 BCALr1625 tRNA BCALr1625 NC_011000.1 1780364 1780439 D tRNA-His 1780364..1780439 Burkholderia cenocepacia J2315 6931891 BCALr1993a tRNA BCALr1993a NC_011000.1 2198601 2198677 R tRNA-Asp complement(2198601..2198677) Burkholderia cenocepacia J2315 6932171 BCALr1993b tRNA BCALr1993b NC_011000.1 2198701 2198776 R tRNA-Val complement(2198701..2198776) Burkholderia cenocepacia J2315 6933367 BCALr2006 tRNA BCALr2006 NC_011000.1 2214308 2214394 R tRNA-Leu complement(2214308..2214394) Burkholderia cenocepacia J2315 6932180 BCALr2125a tRNA BCALr2125a NC_011000.1 2342770 2342846 R tRNA-Asp complement(2342770..2342846) Burkholderia cenocepacia J2315 6932268 BCALr2125b tRNA BCALr2125b NC_011000.1 2342920 2342995 R tRNA-Glu complement(2342920..2342995) Burkholderia cenocepacia J2315 6933370 BCALr2125c tRNA BCALr2125c NC_011000.1 2343061 2343137 R tRNA-Asp complement(2343061..2343137) Burkholderia cenocepacia J2315 6933371 BCALr2125d tRNA BCALr2125d NC_011000.1 2343217 2343292 R tRNA-Glu complement(2343217..2343292) Burkholderia cenocepacia J2315 6933372 BCALr2125e tRNA BCALr2125e NC_011000.1 2343356 2343432 R tRNA-Asp complement(2343356..2343432) Burkholderia cenocepacia J2315 6933373 BCALr2125f tRNA BCALr2125f NC_011000.1 2343511 2343586 R tRNA-Glu complement(2343511..2343586) Burkholderia cenocepacia J2315 6933374 BCALr2125g tRNA BCALr2125g NC_011000.1 2343724 2343799 R tRNA-Ala complement(2343724..2343799) Burkholderia cenocepacia J2315 6933375 BCALr2145 tRNA BCALr2145 NC_011000.1 2370305 2370398 R tRNA-Ser complement(2370305..2370398) Burkholderia cenocepacia J2315 6932284 BCALr2219 tRNA BCALr2219 NC_011000.1 2453318 2453394 R tRNA-Met complement(2453318..2453394) Burkholderia cenocepacia J2315 6932335 BCALr2236 tRNA BCALr2236 NC_011000.1 2477610 2477684 D tRNA-Val 2477610..2477684 Burkholderia cenocepacia J2315 6932349 BCALr2281 tRNA BCALr2281 NC_011000.1 2533008 2533098 D tRNA-Ser 2533008..2533098 Burkholderia cenocepacia J2315 6932389 BCALr2231c tRNA BCALr2231c NC_011000.1 2564995 2565070 R tRNA-Ala complement(2564995..2565070) Burkholderia cenocepacia J2315 6932415 BCALr2311d tRNA BCALr2311d NC_011000.1 2565110 2565186 R tRNA-Ile complement(2565110..2565186) Burkholderia cenocepacia J2315 6933379 BCALr2344 tRNA BCALr2344 NC_011000.1 2597643 2597727 R tRNA-Leu complement(2597643..2597727) Burkholderia cenocepacia J2315 6933877 BCALr2458 tRNA BCALr2458 NC_011000.1 2726137 2726211 D tRNA-Arg 2726137..2726211 Burkholderia cenocepacia J2315 6934126 BCALr2462 tRNA BCALr2462 NC_011000.1 2728452 2728528 D tRNA-Met 2728452..2728528 Burkholderia cenocepacia J2315 6932525 BCALr2687 tRNA BCALr2687 NC_011000.1 2956381 2956465 D tRNA-Leu 2956381..2956465 Burkholderia cenocepacia J2315 6932717 BCALr2852a tRNA BCALr2852a NC_011000.1 3132847 3132920 R tRNA-Cys complement(3132847..3132920) Burkholderia cenocepacia J2315 6932842 BCALr2852b tRNA BCALr2852b NC_011000.1 3133020 3133095 R tRNA-Gly complement(3133020..3133095) Burkholderia cenocepacia J2315 6933388 BCALr2852c tRNA BCALr2852c NC_011000.1 3133147 3133222 R tRNA-Gly complement(3133147..3133222) Burkholderia cenocepacia J2315 6933389 BCALr2852d tRNA BCALr2852d NC_011000.1 3133275 3133350 R tRNA-Gly complement(3133275..3133350) Burkholderia cenocepacia J2315 6933390 BCALr2899a tRNA BCALr2899a NC_011000.1 3180385 3180460 D tRNA-Asn 3180385..3180460 Burkholderia cenocepacia J2315 6932861 BCALr2899b tRNA BCALr2899b NC_011000.1 3180534 3180609 D tRNA-Asn 3180534..3180609 Burkholderia cenocepacia J2315 6933392 BCALr2994 tRNA BCALr2994 NC_011000.1 3286286 3286361 D tRNA-Thr 3286286..3286361 Burkholderia cenocepacia J2315 6933553 BCALr3009a tRNA BCALr3009a NC_011000.1 3300401 3300477 D tRNA-Arg 3300401..3300477 Burkholderia cenocepacia J2315 6933669 BCALr3009b tRNA BCALr3009b NC_011000.1 3300544 3300620 D tRNA-Arg 3300544..3300620 Burkholderia cenocepacia J2315 6933396 BCALr3009c tRNA BCALr3009c NC_011000.1 3300682 3300758 D tRNA-Arg 3300682..3300758 Burkholderia cenocepacia J2315 6933397 BCALr3016 tRNA BCALr3016 NC_011000.1 3308084 3308171 D tRNA-Ser 3308084..3308171 Burkholderia cenocepacia J2315 6932947 BCALr3029 tRNA BCALr3029 NC_011000.1 3320035 3320125 R tRNA-Ser complement(3320035..3320125) Burkholderia cenocepacia J2315 6932957 BCALr3075 tRNA BCALr3075 NC_011000.1 3368618 3368689 D tRNA-Gly 3368618..3368689 Burkholderia cenocepacia J2315 6932989 BCALr3205 tRNA BCALr3205 NC_011000.1 3501708 3501784 D tRNA-Lys 3501708..3501784 Burkholderia cenocepacia J2315 6933069 BCALr3443 tRNA BCALr3443 NC_011000.1 3771080 3771156 D tRNA-Pro 3771080..3771156 Burkholderia cenocepacia J2315 6933763 BCALr3484 tRNA BCALr3484 NC_011000.1 3822428 3822504 D tRNA-Val 3822428..3822504 Burkholderia cenocepacia J2315 6933238 BCAMr0727 tRNA BCAMr0727 NC_011001.1 807316 807386 R tRNA-OTHER complement(807316..807386) Burkholderia cenocepacia J2315 6928497 BCAMr0918 tRNA BCAMr0918 NC_011001.1 1011951 1012029 D tRNA-Met 1011951..1012029 Burkholderia cenocepacia J2315 6928654 BCAMr1023 tRNA BCAMr1023 NC_011001.1 1140087 1140181 D tRNA-Sec 1140087..1140181 Burkholderia cenocepacia J2315 6930634 BCAMr2218 tRNA BCAMr2218 NC_011001.1 2478818 2478902 D tRNA-Leu 2478818..2478902 Burkholderia cenocepacia J2315 6929805 BCAMr2491c tRNA BCAMr2491c NC_011001.1 2825916 2825991 R tRNA-Ala complement(2825916..2825991) Burkholderia cenocepacia J2315 6930038 BCAMr2491d tRNA BCAMr2491d NC_011001.1 2826030 2826106 R tRNA-Ile complement(2826030..2826106) Burkholderia cenocepacia J2315 6930368 BCASr0743c tRNA BCASr0743c NC_011002.1 821417 821492 R tRNA-Ala complement(821417..821492) Burkholderia cenocepacia J2315 6804063 BCASr0743d tRNA BCASr0743d NC_011002.1 821583 821659 R tRNA-Ile complement(821583..821659) Burkholderia cenocepacia J2315 6804602 216591000001 rRNA 216591000001 NC_011000.1 246294 247825 D 16S ribosomal RNA 246294..247825 Burkholderia cenocepacia J2315 216591000002 rRNA 216591000002 NC_011000.1 248361 251237 D 23S ribosomal RNA 248361..251237 Burkholderia cenocepacia J2315 216591000003 rRNA 216591000003 NC_011000.1 251395 251509 D 5S ribosomal RNA 251395..251509 Burkholderia cenocepacia J2315 216591000004 rRNA 216591000004 NC_011000.1 444523 446054 D 16S ribosomal RNA 444523..446054 Burkholderia cenocepacia J2315 216591000005 rRNA 216591000005 NC_011000.1 446586 449462 D 23S ribosomal RNA 446586..449462 Burkholderia cenocepacia J2315 216591000006 rRNA 216591000006 NC_011000.1 449618 449732 D 5S ribosomal RNA 449618..449732 Burkholderia cenocepacia J2315 216591000007 rRNA 216591000007 NC_011000.1 2561566 2561680 R 5S ribosomal RNA complement(2561566..2561680) Burkholderia cenocepacia J2315 216591000008 rRNA 216591000008 NC_011000.1 2561838 2564715 R 23S ribosomal RNA complement(2561838..2564715) Burkholderia cenocepacia J2315 216591000009 rRNA 216591000009 NC_011000.1 2565251 2566782 R 16S ribosomal RNA complement(2565251..2566782) Burkholderia cenocepacia J2315 216591000010 rRNA 216591000010 NC_011000.1 3810224 3810338 R 5S ribosomal RNA complement(3810224..3810338) Burkholderia cenocepacia J2315 216591000011 rRNA 216591000011 NC_011000.1 3810496 3813372 R 23S ribosomal RNA complement(3810496..3813372) Burkholderia cenocepacia J2315 216591000012 rRNA 216591000012 NC_011000.1 3813769 3815300 R 16S ribosomal RNA complement(3813769..3815300) Burkholderia cenocepacia J2315 216591000013 rRNA 216591000013 NC_011001.1 2822491 2822605 R 5S ribosomal RNA complement(2822491..2822605) Burkholderia cenocepacia J2315 216591000014 rRNA 216591000014 NC_011001.1 2822763 2825639 R 23S ribosomal RNA complement(2822763..2825639) Burkholderia cenocepacia J2315 216591000015 rRNA 216591000015 NC_011001.1 2826171 2827702 R 16S ribosomal RNA complement(2826171..2827702) Burkholderia cenocepacia J2315 216591000016 rRNA 216591000016 NC_011002.1 817980 818094 R 5S ribosomal RNA complement(817980..818094) Burkholderia cenocepacia J2315 216591000017 rRNA 216591000017 NC_011002.1 818252 821128 R 23S ribosomal RNA complement(818252..821128) Burkholderia cenocepacia J2315 216591000018 rRNA 216591000018 NC_011002.1 821724 823255 R 16S ribosomal RNA complement(821724..823255) Burkholderia cenocepacia J2315