-- dump date 20140619_012824 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 331271000001 SEQ_END SEQ_END NC_008060.1 3294563 3294563 DR NC_008060.1; contig end 3294563..3294563 Burkholderia cenocepacia AU 1054 331271000002 SEQ_END SEQ_END NC_008061.1 2788459 2788459 DR NC_008061.1; contig end 2788459..2788459 Burkholderia cenocepacia AU 1054 331271000003 SEQ_END SEQ_END NC_008062.1 1196094 1196094 DR NC_008062.1; contig end 1196094..1196094 Burkholderia cenocepacia AU 1054 YP_619890.1 CDS Bcen_0001 NC_008060.1 278 1393 R ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase complement(278..1393) Burkholderia cenocepacia AU 1054 4090792 YP_619891.1 CDS Bcen_0002 NC_008060.1 1408 2622 R PFAM: sodium/hydrogen exchanger; KEGG: bur:Bcep18194_A3249 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(1408..2622) Burkholderia cenocepacia AU 1054 4090793 YP_619892.1 CDS Bcen_0003 NC_008060.1 2666 2992 R hypothetical protein complement(2666..2992) Burkholderia cenocepacia AU 1054 4091873 YP_619893.1 CDS mnmC NC_008060.1 3294 5225 R catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase complement(3294..5225) Burkholderia cenocepacia AU 1054 4091874 YP_619894.1 CDS Bcen_0005 NC_008060.1 5614 5892 D PFAM: histone-like DNA-binding protein; KEGG: bur:Bcep18194_A3247 histone-like DNA-binding protein; histone-like DNA-binding protein 5614..5892 Burkholderia cenocepacia AU 1054 4091875 YP_619895.1 CDS Bcen_0006 NC_008060.1 6021 7433 R PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW-like; KEGG: bur:Bcep18194_A3246 cobalamin synthesis protein/P47K; cobalamin synthesis protein, P47K complement(6021..7433) Burkholderia cenocepacia AU 1054 4091876 YP_619896.1 CDS Bcen_0007 NC_008060.1 7488 7982 R PFAM: Lytic transglycosylase, catalytic; KEGG: bur:Bcep18194_A3245 lytic transglycosylase; lytic transglycosylase, catalytic complement(7488..7982) Burkholderia cenocepacia AU 1054 4091877 YP_619897.1 CDS Bcen_0008 NC_008060.1 8351 10675 D TIGRFAM: Type II secretion system gspD; PFAM: type II and III secretion system protein; NolW-like; KEGG: bur:Bcep18194_A3244 type II and III secretion system protein; Type II secretion system gspD 8351..10675 Burkholderia cenocepacia AU 1054 4091878 YP_619898.1 CDS Bcen_0009 NC_008060.1 10672 12171 D KEGG: bur:Bcep18194_A3243 type II secretion system protein E TIGRFAM: Type II secretion system gspE; PFAM: type II secretion system protein E; SMART: ATPase; Type II secretion system gspE 10672..12171 Burkholderia cenocepacia AU 1054 4091879 YP_619899.1 CDS Bcen_0010 NC_008060.1 12176 13393 D TIGRFAM: General secretion pathway protein F; PFAM: type II secretion system protein; KEGG: bur:Bcep18194_A3242 general secretion pathway protein F; general secretion pathway protein F 12176..13393 Burkholderia cenocepacia AU 1054 4091880 YP_619900.1 CDS Bcen_0011 NC_008060.1 13431 13841 R KEGG: bur:Bcep18194_A3241 hypothetical protein; hypothetical protein complement(13431..13841) Burkholderia cenocepacia AU 1054 4091881 YP_619901.1 CDS Bcen_0012 NC_008060.1 14017 14469 D TIGRFAM: General secretion pathway protein G; PFAM: methylation; type II secretion system protein G; KEGG: bur:Bcep18194_A3240 general secretion pathway protein G; general secretion pathway protein G 14017..14469 Burkholderia cenocepacia AU 1054 4091882 YP_619902.1 CDS Bcen_0013 NC_008060.1 14509 15078 D TIGRFAM: General secretion pathway protein H; PFAM: methylation; KEGG: bur:Bcep18194_A3239 general secretion pathway protein H; general secretion pathway protein H 14509..15078 Burkholderia cenocepacia AU 1054 4091883 YP_619903.1 CDS Bcen_0014 NC_008060.1 15081 15482 D TIGRFAM: General secretion pathway protein I; PFAM: type II secretion system protein I/J; methylation; KEGG: bur:Bcep18194_A3238 general secretion pathway protein I; general secretion pathway protein I 15081..15482 Burkholderia cenocepacia AU 1054 4091884 YP_619904.1 CDS Bcen_0015 NC_008060.1 15490 16158 D PFAM: methylation; KEGG: bur:Bcep18194_A3237 general secretion pathway protein J; general secretion pathway protein J 15490..16158 Burkholderia cenocepacia AU 1054 4091885 YP_619905.1 CDS Bcen_0016 NC_008060.1 16161 17270 D PFAM: General secretion pathway protein K; KEGG: bur:Bcep18194_A3236 general secretion pathway protein K; general secretion pathway protein K 16161..17270 Burkholderia cenocepacia AU 1054 4091886 YP_619906.1 CDS Bcen_0017 NC_008060.1 17297 18670 D PFAM: General secretion pathway L; KEGG: bur:Bcep18194_A3235 general secretion pathway protein L protein; general secretion pathway protein L 17297..18670 Burkholderia cenocepacia AU 1054 4091887 YP_619907.1 CDS Bcen_0018 NC_008060.1 18667 19173 D PFAM: General secretion pathway M protein; KEGG: bur:Bcep18194_A3234 general secretion pathway protein M; general secretion pathway protein M 18667..19173 Burkholderia cenocepacia AU 1054 4091888 YP_619908.1 CDS Bcen_0019 NC_008060.1 19174 19998 D KEGG: bur:Bcep18194_A3233 hypothetical protein; hypothetical protein 19174..19998 Burkholderia cenocepacia AU 1054 4091889 YP_619909.1 CDS Bcen_0020 NC_008060.1 20030 21601 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A3232 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT complement(20030..21601) Burkholderia cenocepacia AU 1054 4091890 YP_619910.1 CDS Bcen_0021 NC_008060.1 21883 22170 R KEGG: bur:Bcep18194_A3231 hypothetical protein; hypothetical protein complement(21883..22170) Burkholderia cenocepacia AU 1054 4091891 YP_619911.1 CDS Bcen_0022 NC_008060.1 22345 22833 D PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_A3230 transcriptional regulator, MarR family; MarR family transcriptional regulator 22345..22833 Burkholderia cenocepacia AU 1054 4091892 YP_619912.1 CDS Bcen_0023 NC_008060.1 23010 24572 D TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3229 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 23010..24572 Burkholderia cenocepacia AU 1054 4091893 YP_619913.1 CDS Bcen_0024 NC_008060.1 24678 24926 D TIGRFAM: Prevent-host-death protein; PFAM: protein of unknown function DUF172; KEGG: tbd:Tbd_2423 prevent-host-death protein; prevent-host-death protein 24678..24926 Burkholderia cenocepacia AU 1054 4091894 YP_619914.1 CDS Bcen_0025 NC_008060.1 24923 25309 D PFAM: PilT protein-like; KEGG: tbd:Tbd_2422 hypothetical protein; PilT protein-like protein 24923..25309 Burkholderia cenocepacia AU 1054 4091895 YP_619915.1 CDS Bcen_0026 NC_008060.1 25334 26260 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3228 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(25334..26260) Burkholderia cenocepacia AU 1054 4091896 YP_619916.1 CDS Bcen_0027 NC_008060.1 26402 26875 D PFAM: LrgA; KEGG: bur:Bcep18194_A3227 LrgA; LrgA 26402..26875 Burkholderia cenocepacia AU 1054 4091897 YP_619917.1 CDS Bcen_0028 NC_008060.1 26889 27611 D PFAM: LrgB-like protein; KEGG: bur:Bcep18194_A3226 LrgB-like protein; LrgB-like protein 26889..27611 Burkholderia cenocepacia AU 1054 4091898 YP_619918.1 CDS fliL NC_008060.1 27824 28357 D interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 27824..28357 Burkholderia cenocepacia AU 1054 4091899 YP_619919.1 CDS fliM NC_008060.1 28380 29378 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 28380..29378 Burkholderia cenocepacia AU 1054 4091900 YP_619920.1 CDS Bcen_0031 NC_008060.1 29371 29859 D TIGRFAM: Flagellar motor switch FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bur:Bcep18194_A3223 type III secretion system outer membrane O protein; flagellar motor switch FliN 29371..29859 Burkholderia cenocepacia AU 1054 4091901 YP_619921.1 CDS Bcen_0032 NC_008060.1 29856 30437 D PFAM: flagellar biosynthesis protein, FliO; KEGG: bur:Bcep18194_A3222 flagellar biosynthesis protein, FliO; flagellar biosynthesis protein, FliO 29856..30437 Burkholderia cenocepacia AU 1054 4091902 YP_619922.1 CDS fliP NC_008060.1 30474 31235 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 30474..31235 Burkholderia cenocepacia AU 1054 4091903 YP_619923.1 CDS fliQ NC_008060.1 31253 31525 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 31253..31525 Burkholderia cenocepacia AU 1054 4091904 YP_619924.1 CDS Bcen_0035 NC_008060.1 31550 32332 D TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: bur:Bcep18194_A3219 flagellar biosynthesis protein FliR; flagellar biosynthetic protein FliR 31550..32332 Burkholderia cenocepacia AU 1054 4091905 YP_619925.1 CDS Bcen_0036 NC_008060.1 32518 33522 D KEGG: bur:Bcep18194_A3218 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein; ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein 32518..33522 Burkholderia cenocepacia AU 1054 4091906 YP_619926.1 CDS Bcen_0037 NC_008060.1 33644 34441 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A3217 ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit; ABC transporter 33644..34441 Burkholderia cenocepacia AU 1054 4091907 YP_619927.1 CDS Bcen_0038 NC_008060.1 34501 35358 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A3216 ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 34501..35358 Burkholderia cenocepacia AU 1054 4091908 YP_619928.1 CDS Bcen_0039 NC_008060.1 35447 36814 D PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; Two-component sensor kinase-like; KEGG: bur:Bcep18194_A3215 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 35447..36814 Burkholderia cenocepacia AU 1054 4091909 YP_619929.1 CDS Bcen_0040 NC_008060.1 36828 37505 D PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bte:BTH_I0039 DNA-binding response regulator; two component transcriptional regulator 36828..37505 Burkholderia cenocepacia AU 1054 4091910 YP_619930.1 CDS Bcen_0041 NC_008060.1 37608 38915 D KEGG: bur:Bcep18194_A3214 outer membrane protein (porin)-like; outer membrane protein (porin)-like protein 37608..38915 Burkholderia cenocepacia AU 1054 4091911 YP_619931.1 CDS Bcen_0042 NC_008060.1 39275 41293 D PFAM: DNA methylase N-4/N-6; KEGG: bur:Bcep18194_A3213 site-specific DNA-methyltransferase (adenine-specific); site-specific DNA-methyltransferase (adenine-specific) 39275..41293 Burkholderia cenocepacia AU 1054 4091912 YP_619932.1 CDS Bcen_0043 NC_008060.1 41293 44319 D PFAM: type III restriction enzyme, res subunit; KEGG: bur:Bcep18194_A3212 type III restriction enzyme, res subunit; type III restriction enzyme, res subunit 41293..44319 Burkholderia cenocepacia AU 1054 4091913 YP_619933.1 CDS Bcen_0044 NC_008060.1 44585 44941 R KEGG: bur:Bcep18194_A3211 hypothetical protein; hypothetical protein complement(44585..44941) Burkholderia cenocepacia AU 1054 4091914 YP_619934.1 CDS Bcen_0045 NC_008060.1 45129 45341 R KEGG: bur:Bcep18194_A3210 hypothetical protein; hypothetical protein complement(45129..45341) Burkholderia cenocepacia AU 1054 4091915 YP_619935.1 CDS Bcen_0046 NC_008060.1 45394 45696 R KEGG: bur:Bcep18194_A3209 hypothetical protein; hypothetical protein complement(45394..45696) Burkholderia cenocepacia AU 1054 4091916 YP_619936.1 CDS Bcen_0047 NC_008060.1 45990 47003 R KEGG: bur:Bcep18194_A3208 hypothetical protein; hypothetical protein complement(45990..47003) Burkholderia cenocepacia AU 1054 4091917 YP_619937.1 CDS Bcen_0048 NC_008060.1 46987 48213 R PFAM: protein of unknown function DUF323; KEGG: bur:Bcep18194_A3207 protein of unknown function DUF323; hypothetical protein complement(46987..48213) Burkholderia cenocepacia AU 1054 4091918 YP_619938.1 CDS Bcen_0049 NC_008060.1 48218 48451 R KEGG: bur:Bcep18194_A3206 hypothetical protein; hypothetical protein complement(48218..48451) Burkholderia cenocepacia AU 1054 4091919 YP_619939.1 CDS Bcen_0050 NC_008060.1 48794 49270 D TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_A3205 alkylhydroperoxidase AhpD core; alkylhydroperoxidase AhpD core 48794..49270 Burkholderia cenocepacia AU 1054 4091920 YP_619940.1 CDS Bcen_0051 NC_008060.1 49270 50151 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ 49270..50151 Burkholderia cenocepacia AU 1054 4091921 YP_619941.1 CDS Bcen_0052 NC_008060.1 50254 50769 R KEGG: bur:Bcep18194_A3203 hypothetical protein; hypothetical protein complement(50254..50769) Burkholderia cenocepacia AU 1054 4091922 YP_619942.1 CDS Bcen_0054 NC_008060.1 51762 52022 D KEGG: bur:Bcep18194_A3202 hypothetical protein; hypothetical protein 51762..52022 Burkholderia cenocepacia AU 1054 4091925 YP_619943.1 CDS Bcen_0055 NC_008060.1 52054 52383 D KEGG: bur:Bcep18194_A3201 hypothetical protein; hypothetical protein 52054..52383 Burkholderia cenocepacia AU 1054 4091926 YP_619944.1 CDS Bcen_0056 NC_008060.1 52402 52659 D hypothetical protein 52402..52659 Burkholderia cenocepacia AU 1054 4091927 YP_619945.1 CDS Bcen_0057 NC_008060.1 52842 53159 D KEGG: bur:Bcep18194_A3200 hypothetical protein; hypothetical protein 52842..53159 Burkholderia cenocepacia AU 1054 4091928 YP_619946.1 CDS Bcen_0058 NC_008060.1 53105 53371 R hypothetical protein complement(53105..53371) Burkholderia cenocepacia AU 1054 4091929 YP_619947.1 CDS Bcen_0059 NC_008060.1 53748 54506 R KEGG: bur:Bcep18194_A3198 transmembrane transcriptional regulator (anti-sigma factor); transmembrane anti-sigma factor complement(53748..54506) Burkholderia cenocepacia AU 1054 4091930 YP_619948.1 CDS Bcen_0060 NC_008060.1 54503 55024 R PFAM: sigma-70 region 2; sigma-70 region 4; Sigma-70, region 4 type 2; KEGG: bur:Bcep18194_A3197 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor complement(54503..55024) Burkholderia cenocepacia AU 1054 4091721 YP_619949.1 CDS Bcen_0061 NC_008060.1 55183 56268 D PFAM: Catalase-like; KEGG: bur:Bcep18194_A3196 catalase-like; catalase-like protein 55183..56268 Burkholderia cenocepacia AU 1054 4091722 YP_619950.1 CDS Bcen_0062 NC_008060.1 56268 56798 D PFAM: cytochrome B561; KEGG: bur:Bcep18194_A3195 cytochrome b561; cytochrome B561 56268..56798 Burkholderia cenocepacia AU 1054 4091723 YP_619951.1 CDS Bcen_0063 NC_008060.1 62822 64897 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bur:Bcep18194_A3632 molybdopterin oxidoreductase; molybdopterin oxidoreductase 62822..64897 Burkholderia cenocepacia AU 1054 4091727 YP_619952.1 CDS Bcen_0064 NC_008060.1 65035 66708 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 65035..66708 Burkholderia cenocepacia AU 1054 4091728 YP_619953.1 CDS Bcen_0065 NC_008060.1 66787 67212 D KEGG: bma:BMA2996 hypothetical protein; hypothetical protein 66787..67212 Burkholderia cenocepacia AU 1054 4091729 YP_619954.1 CDS Bcen_0066 NC_008060.1 67213 68364 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_A3634 outer membrane protein, (porin); porin complement(67213..68364) Burkholderia cenocepacia AU 1054 4091730 YP_619955.1 CDS Bcen_0067 NC_008060.1 68641 69267 D KEGG: bur:Bcep18194_A3635 ubiquinone biosynthesis protein COQ7-like; ubiquinone biosynthesis protein COQ7-like protein 68641..69267 Burkholderia cenocepacia AU 1054 4091731 YP_619956.1 CDS Bcen_0068 NC_008060.1 69654 70082 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 69654..70082 Burkholderia cenocepacia AU 1054 4091732 YP_619957.1 CDS mraW NC_008060.1 70106 71047 D PFAM: methyltransferase; KEGG: bur:Bcep18194_A3637 methyltransferase; S-adenosyl-methyltransferase MraW 70106..71047 Burkholderia cenocepacia AU 1054 4091733 YP_619958.1 CDS Bcen_0070 NC_008060.1 71044 71385 D TIGRFAM: Cell division protein, FtsL -like; PFAM: cell division protein FtsL; KEGG: bur:Bcep18194_A3638 cell division protein, FtsL -like; cell division protein, FtsL -like 71044..71385 Burkholderia cenocepacia AU 1054 4091734 YP_619959.1 CDS Bcen_0071 NC_008060.1 71382 73229 D PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: bur:Bcep18194_A3639 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 71382..73229 Burkholderia cenocepacia AU 1054 4091735 YP_619960.1 CDS murE NC_008060.1 73226 74773 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 73226..74773 Burkholderia cenocepacia AU 1054 4091736 YP_619961.1 CDS Bcen_0073 NC_008060.1 74770 76176 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase-like; cytoplasmic peptidoglycan synthetases-like; Mur ligase, middle region; KEGG: bur:Bcep18194_A3641 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D -alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 74770..76176 Burkholderia cenocepacia AU 1054 4091737 YP_619962.1 CDS mraY NC_008060.1 76193 77362 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 76193..77362 Burkholderia cenocepacia AU 1054 4091835 YP_619963.1 CDS murD NC_008060.1 77391 78902 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 77391..78902 Burkholderia cenocepacia AU 1054 4091836 YP_619964.1 CDS Bcen_0076 NC_008060.1 78899 80182 D TIGRFAM: Cell division protein FtsW; PFAM: cell cycle protein; KEGG: bur:Bcep18194_A3644 cell cycle protein; cell division protein FtsW 78899..80182 Burkholderia cenocepacia AU 1054 4091837 YP_619965.1 CDS murG NC_008060.1 80179 81282 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 80179..81282 Burkholderia cenocepacia AU 1054 4091838 YP_619966.1 CDS murC NC_008060.1 81279 82676 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 81279..82676 Burkholderia cenocepacia AU 1054 4091839 YP_619967.1 CDS ddl NC_008060.1 82678 83619 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 82678..83619 Burkholderia cenocepacia AU 1054 4091840 YP_619968.1 CDS Bcen_0080 NC_008060.1 83639 84391 D PFAM: cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: bur:Bcep18194_A3648 cell division protein FtsQ; cell division protein FtsQ 83639..84391 Burkholderia cenocepacia AU 1054 4091841 YP_619969.1 CDS Bcen_0081 NC_008060.1 84418 85650 D PFAM: cell division protein FtsA; KEGG: bur:Bcep18194_A3649 cell division protein FtsA; cell division protein FtsA 84418..85650 Burkholderia cenocepacia AU 1054 4091842 YP_619970.1 CDS Bcen_0082 NC_008060.1 85763 86959 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 85763..86959 Burkholderia cenocepacia AU 1054 4091843 YP_619971.1 CDS Bcen_0083 NC_008060.1 87149 87655 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin; KEGG: bur:Bcep18194_A3651 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; redoxin 87149..87655 Burkholderia cenocepacia AU 1054 4091844 YP_619972.1 CDS lpxC NC_008060.1 87896 88813 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 87896..88813 Burkholderia cenocepacia AU 1054 4091845 YP_619973.1 CDS Bcen_0086 NC_008060.1 90257 90733 R KEGG: bur:Bcep18194_A3653 hypothetical protein; hypothetical protein complement(90257..90733) Burkholderia cenocepacia AU 1054 4091847 YP_619974.1 CDS Bcen_0087 NC_008060.1 90990 93788 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 90990..93788 Burkholderia cenocepacia AU 1054 4091848 YP_619975.1 CDS argJ NC_008060.1 93933 95174 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 93933..95174 Burkholderia cenocepacia AU 1054 4091849 YP_619976.1 CDS Bcen_0089 NC_008060.1 95194 96063 D PFAM: protein of unknown function DUF815; SMART: ATPase; KEGG: bur:Bcep18194_A3656 protein of unknown function DUF815; hypothetical protein 95194..96063 Burkholderia cenocepacia AU 1054 4091850 YP_619977.1 CDS Bcen_0090 NC_008060.1 96060 96503 D PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A3657 NUDIX hydrolase; NUDIX hydrolase 96060..96503 Burkholderia cenocepacia AU 1054 4091851 YP_619978.1 CDS Bcen_0091 NC_008060.1 96564 96764 R PFAM: protein of unknown function DUF329; KEGG: bur:Bcep18194_A3658 protein of unknown function DUF329; hypothetical protein complement(96564..96764) Burkholderia cenocepacia AU 1054 4091852 YP_619979.1 CDS Bcen_0092 NC_008060.1 96793 97548 R PFAM: protein of unknown function DUF1342; KEGG: bur:Bcep18194_A3659 protein of unknown function DUF1342; hypothetical protein complement(96793..97548) Burkholderia cenocepacia AU 1054 4091853 YP_619980.1 CDS coaE NC_008060.1 97658 98266 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(97658..98266) Burkholderia cenocepacia AU 1054 4091854 YP_619981.1 CDS Bcen_0094 NC_008060.1 98268 99179 R PFAM: peptidase A24A, prepilin type IV; peptidase A24A-like; KEGG: bur:Bcep18194_A3661 prepilin peptidase; prepilin peptidase complement(98268..99179) Burkholderia cenocepacia AU 1054 4091855 YP_619982.1 CDS Bcen_0095 NC_008060.1 99224 100435 R PFAM: type II secretion system protein; KEGG: bur:Bcep18194_A3662 type II secretion system protein F; type II secretion system protein complement(99224..100435) Burkholderia cenocepacia AU 1054 4091856 YP_619983.1 CDS Bcen_0096 NC_008060.1 100432 101718 R PFAM: type II secretion system protein E; SMART: ATPase; KEGG: bur:Bcep18194_A3663 type II secretion system protein E; type II secretion system protein E complement(100432..101718) Burkholderia cenocepacia AU 1054 4091857 YP_619984.1 CDS Bcen_0097 NC_008060.1 101790 103163 R PFAM: CBS; protein of unknown function DUF21; transporter-associated region; KEGG: bur:Bcep18194_A3664 hypothetical protein; hypothetical protein complement(101790..103163) Burkholderia cenocepacia AU 1054 4091858 YP_619985.1 CDS Bcen_0098 NC_008060.1 103448 104443 R PFAM: Polyprenyl synthetase; KEGG: bur:Bcep18194_A3665 trans-hexaprenyltranstransferase; trans-hexaprenyltranstransferase complement(103448..104443) Burkholderia cenocepacia AU 1054 4091860 YP_619986.1 CDS rplU NC_008060.1 104654 104965 D PFAM: ribosomal protein L21; KEGG: bur:Bcep18194_A3666 ribosomal protein L21; 50S ribosomal protein L21 104654..104965 Burkholderia cenocepacia AU 1054 4091861 YP_619987.1 CDS rpmA NC_008060.1 104990 105253 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 104990..105253 Burkholderia cenocepacia AU 1054 4091862 YP_619988.1 CDS obgE NC_008060.1 105440 106552 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 105440..106552 Burkholderia cenocepacia AU 1054 4091863 YP_619989.1 CDS Bcen_0102 NC_008060.1 106642 107760 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 106642..107760 Burkholderia cenocepacia AU 1054 4091864 YP_619990.1 CDS Bcen_0103 NC_008060.1 107855 108463 R KEGG: bur:Bcep18194_A3670 hypothetical protein; hypothetical protein complement(107855..108463) Burkholderia cenocepacia AU 1054 4091865 YP_619991.1 CDS Bcen_0104 NC_008060.1 108477 109121 R hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase complement(108477..109121) Burkholderia cenocepacia AU 1054 4091866 YP_619992.1 CDS Bcen_0105 NC_008060.1 109350 111086 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 109350..111086 Burkholderia cenocepacia AU 1054 4091867 YP_619993.1 CDS Bcen_0106 NC_008060.1 111108 111710 D PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: bur:Bcep18194_A3673 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-like proteins 111108..111710 Burkholderia cenocepacia AU 1054 4091868 YP_619994.1 CDS Bcen_0107 NC_008060.1 111793 112344 R Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase complement(111793..112344) Burkholderia cenocepacia AU 1054 4091869 YP_619995.1 CDS Bcen_0108 NC_008060.1 112439 113806 R KEGG: bur:Bcep18194_A3675 signal recognition particle protein TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G-domain; Signal peptide binding (SRP54) M-domain; SMART: ATPase; signal recognition particle protein complement(112439..113806) Burkholderia cenocepacia AU 1054 4091870 YP_619996.1 CDS Bcen_0109 NC_008060.1 113897 114790 D PFAM: cytochrome c assembly protein; KEGG: bur:Bcep18194_A3676 cytochrome c assembly protein; cytochrome c assembly protein 113897..114790 Burkholderia cenocepacia AU 1054 4091871 YP_619997.1 CDS Bcen_0110 NC_008060.1 114804 115124 D KEGG: bur:Bcep18194_A3677 hypothetical protein; hypothetical protein 114804..115124 Burkholderia cenocepacia AU 1054 4091872 YP_619998.1 CDS Bcen_0111 NC_008060.1 115121 115711 D PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: bur:Bcep18194_A3678 negative regulator of AmpC, AmpD; N-acetyl-anhydromuranmyl-L-alanine amidase 115121..115711 Burkholderia cenocepacia AU 1054 4091335 YP_619999.1 CDS Bcen_0112 NC_008060.1 116164 119169 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 116164..119169 Burkholderia cenocepacia AU 1054 4091336 YP_620000.1 CDS Bcen_0113 NC_008060.1 119598 120746 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 119598..120746 Burkholderia cenocepacia AU 1054 4091337 YP_620001.1 CDS Bcen_0114 NC_008060.1 120829 121155 D hypothetical protein 120829..121155 Burkholderia cenocepacia AU 1054 4091338 YP_620002.1 CDS Bcen_0115 NC_008060.1 121184 121831 D KEGG: bur:Bcep18194_A3681 hypothetical protein; hypothetical protein 121184..121831 Burkholderia cenocepacia AU 1054 4091339 YP_620003.1 CDS Bcen_0116 NC_008060.1 122059 122532 R PFAM: 17 kDa surface antigen; KEGG: bur:Bcep18194_A3682 outer membrane lipoprotein; 17 kDa surface antigen complement(122059..122532) Burkholderia cenocepacia AU 1054 4091340 YP_620004.1 CDS Bcen_0117 NC_008060.1 122552 123490 R PFAM: PfkB; KEGG: bur:Bcep18194_A3683 adenosine kinase; adenosine kinase complement(122552..123490) Burkholderia cenocepacia AU 1054 4091341 YP_620005.1 CDS Bcen_0118 NC_008060.1 123576 124079 R PFAM: Redoxin; KEGG: bur:Bcep18194_A3684 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; redoxin complement(123576..124079) Burkholderia cenocepacia AU 1054 4091342 YP_620006.1 CDS Bcen_0119 NC_008060.1 124151 125551 R TIGRFAM: Zinc finger/thioredoxin ; KEGG: bur:Bcep18194_A3685 MJ0042 finger-like region containing protein; Zinc finger/thioredoxin complement(124151..125551) Burkholderia cenocepacia AU 1054 4091343 YP_620007.1 CDS prmA NC_008060.1 125597 126499 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase complement(125597..126499) Burkholderia cenocepacia AU 1054 4091344 YP_620008.1 CDS Bcen_0121 NC_008060.1 126502 127869 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(126502..127869) Burkholderia cenocepacia AU 1054 4091345 YP_620009.1 CDS Bcen_0122 NC_008060.1 127957 128430 R composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(127957..128430) Burkholderia cenocepacia AU 1054 4091346 YP_620010.1 CDS Bcen_0123 NC_008060.1 128497 128949 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(128497..128949) Burkholderia cenocepacia AU 1054 4091347 YP_620011.1 CDS Bcen_0124 NC_008060.1 129144 129692 R PFAM: Redoxin; KEGG: bur:Bcep18194_A3690 thiol-disulfide isomerase/thioredoxin-like; redoxin complement(129144..129692) Burkholderia cenocepacia AU 1054 4091348 YP_620012.1 CDS Bcen_0125 NC_008060.1 129908 130336 D PFAM: transposase, IS605 OrfB; KEGG: noc:Noc_1587 transposase; transposase, IS605 OrfB 129908..130336 Burkholderia cenocepacia AU 1054 4091349 YP_620013.1 CDS Bcen_0126 NC_008060.1 130338 130982 R KEGG: bur:Bcep18194_A3691 hypothetical protein; hypothetical protein complement(130338..130982) Burkholderia cenocepacia AU 1054 4091350 YP_620014.1 CDS Bcen_0127 NC_008060.1 131229 132614 D TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase-like; cytoplasmic peptidoglycan synthetases-like; Mur ligase, middle region; KEGG: bur:Bcep18194_A3692 UDP-N-acetylmuramate/L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 131229..132614 Burkholderia cenocepacia AU 1054 4091351 YP_620015.1 CDS Bcen_0128 NC_008060.1 132611 133180 D PFAM: protein of unknown function UPF0227; KEGG: bur:Bcep18194_A3693 protein of unknown function UPF0227; hypothetical protein 132611..133180 Burkholderia cenocepacia AU 1054 4091352 YP_620016.1 CDS Bcen_0129 NC_008060.1 133261 135345 D PFAM: ribonuclease II; KEGG: bur:Bcep18194_A3694 ribonuclease II; ribonuclease II 133261..135345 Burkholderia cenocepacia AU 1054 4091353 YP_620017.1 CDS aroE NC_008060.1 135342 136208 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 135342..136208 Burkholderia cenocepacia AU 1054 4092586 YP_620018.1 CDS mtgA NC_008060.1 136223 136960 D glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 136223..136960 Burkholderia cenocepacia AU 1054 4092587 YP_620019.1 CDS Bcen_0132 NC_008060.1 137384 138994 D PFAM: peptidase S10, serine carboxypeptidase; KEGG: bur:Bcep18194_A3697 carboxypeptidase C (cathepsin A)-like; peptidase S10, serine carboxypeptidase 137384..138994 Burkholderia cenocepacia AU 1054 4092588 YP_620020.1 CDS Bcen_0133 NC_008060.1 139074 139475 D KEGG: bur:Bcep18194_A3698 hypothetical protein; hypothetical protein 139074..139475 Burkholderia cenocepacia AU 1054 4092589 YP_620021.1 CDS Bcen_0134 NC_008060.1 139627 140724 D PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_A3699 transcriptional regulator, IclR family; IclR family transcriptional regulator 139627..140724 Burkholderia cenocepacia AU 1054 4092590 YP_620022.1 CDS Bcen_0135 NC_008060.1 140721 141746 D PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bur:Bcep18194_A3700 2-keto-3-deoxy-galactonokinase; 2-keto-3-deoxy-galactonokinase 140721..141746 Burkholderia cenocepacia AU 1054 4092591 YP_620023.1 CDS Bcen_0136 NC_008060.1 141769 142446 D catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 141769..142446 Burkholderia cenocepacia AU 1054 4092592 YP_620024.1 CDS Bcen_0137 NC_008060.1 142443 143225 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A3702 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 142443..143225 Burkholderia cenocepacia AU 1054 4092593 YP_620025.1 CDS Bcen_0138 NC_008060.1 143337 144332 D TIGRFAM: Twin-arginine translocation pathway signal; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A3703 ABC sugar transporter, periplasmic ligand binding protein; twin-arginine translocation pathway signal 143337..144332 Burkholderia cenocepacia AU 1054 4092594 YP_620026.1 CDS araG NC_008060.1 144400 145911 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 144400..145911 Burkholderia cenocepacia AU 1054 4092595 YP_620027.1 CDS araH NC_008060.1 145989 147005 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 145989..147005 Burkholderia cenocepacia AU 1054 4092596 YP_620028.1 CDS Bcen_0141 NC_008060.1 147034 147849 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A3706 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 147034..147849 Burkholderia cenocepacia AU 1054 4092597 YP_620029.1 CDS Bcen_0142 NC_008060.1 147899 148960 D PFAM: Aldose 1-epimerase; KEGG: bur:Bcep18194_A3707 aldose 1-epimerase; aldose 1-epimerase 147899..148960 Burkholderia cenocepacia AU 1054 4092598 YP_620030.1 CDS pyrF NC_008060.1 149000 149827 D type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 149000..149827 Burkholderia cenocepacia AU 1054 4092599 YP_620031.1 CDS Bcen_0144 NC_008060.1 150054 151112 D KEGG: bur:Bcep18194_A3709 hypothetical protein; hypothetical protein 150054..151112 Burkholderia cenocepacia AU 1054 4092600 YP_620032.1 CDS Bcen_0145 NC_008060.1 151151 151651 R PFAM: CinA-like; KEGG: bur:Bcep18194_A3710 CinA-like; CinA-like protein complement(151151..151651) Burkholderia cenocepacia AU 1054 4092601 YP_620033.1 CDS Bcen_0146 NC_008060.1 151697 152233 R PFAM: phosphatidylglycerophosphatase A; KEGG: bur:Bcep18194_A3711 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A complement(151697..152233) Burkholderia cenocepacia AU 1054 4092602 YP_620034.1 CDS Bcen_0147 NC_008060.1 152223 153221 R catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase complement(152223..153221) Burkholderia cenocepacia AU 1054 4092603 YP_620035.1 CDS Bcen_0148 NC_008060.1 153341 155698 D NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 153341..155698 Burkholderia cenocepacia AU 1054 4092604 YP_620036.1 CDS Bcen_0149 NC_008060.1 156074 156505 D PFAM: guanine-specific ribonuclease N1 and T1; KEGG: bur:Bcep18194_A3714 guanine-specific ribonuclease N1 and T1; guanine-specific ribonuclease N1 and T1 156074..156505 Burkholderia cenocepacia AU 1054 4092605 YP_620037.1 CDS Bcen_0150 NC_008060.1 156522 157085 D KEGG: bur:Bcep18194_A3715 hypothetical protein; hypothetical protein 156522..157085 Burkholderia cenocepacia AU 1054 4090814 YP_620038.1 CDS Bcen_0151 NC_008060.1 157294 158037 D KEGG: bur:Bcep18194_A3717 hypothetical protein; hypothetical protein 157294..158037 Burkholderia cenocepacia AU 1054 4090815 YP_620039.2 CDS Bcen_0152 NC_008060.1 158351 159118 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(158351..159118) Burkholderia cenocepacia AU 1054 4090816 YP_620040.1 CDS Bcen_0153 NC_008060.1 159136 159552 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A3720 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(159136..159552) Burkholderia cenocepacia AU 1054 4090817 YP_620041.1 CDS Bcen_0154 NC_008060.1 159641 160498 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(159641..160498) Burkholderia cenocepacia AU 1054 4090818 YP_620042.1 CDS Bcen_0155 NC_008060.1 160714 162786 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 160714..162786 Burkholderia cenocepacia AU 1054 4090819 YP_620043.1 CDS Bcen_0156 NC_008060.1 162878 163888 D KEGG: bte:BTH_I1196 glyceraldehyde-3-phosphate dehydrogenase, type I TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 162878..163888 Burkholderia cenocepacia AU 1054 4090820 YP_620044.1 CDS Bcen_0157 NC_008060.1 163966 164856 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3724 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(163966..164856) Burkholderia cenocepacia AU 1054 4090821 YP_620045.1 CDS Bcen_0158 NC_008060.1 165010 165783 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A3725 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 165010..165783 Burkholderia cenocepacia AU 1054 4090822 YP_620046.1 CDS Bcen_0159 NC_008060.1 165812 166855 D PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_A3728 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase GroES-like protein 165812..166855 Burkholderia cenocepacia AU 1054 4090823 YP_620047.1 CDS Bcen_0160 NC_008060.1 166989 168188 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3729 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(166989..168188) Burkholderia cenocepacia AU 1054 4090824 YP_620048.2 CDS Bcen_0161 NC_008060.1 168502 169392 D controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR 168502..169392 Burkholderia cenocepacia AU 1054 4090825 YP_620049.1 CDS Bcen_0162 NC_008060.1 169435 170310 R PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: bur:Bcep18194_A3731 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(169435..170310) Burkholderia cenocepacia AU 1054 4090826 YP_620050.1 CDS Bcen_0163 NC_008060.1 170368 171687 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 170368..171687 Burkholderia cenocepacia AU 1054 4090827 YP_620051.1 CDS Bcen_0164 NC_008060.1 171792 172799 D catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase 171792..172799 Burkholderia cenocepacia AU 1054 4090828 YP_620052.1 CDS Bcen_0165 NC_008060.1 172814 173347 D catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 172814..173347 Burkholderia cenocepacia AU 1054 4090829 YP_620053.1 CDS Bcen_0166 NC_008060.1 173441 173869 R PFAM: ferric-uptake regulator; KEGG: bur:Bcep18194_A3735 ferric uptake regulator, FUR family; ferric uptake regulator family protein complement(173441..173869) Burkholderia cenocepacia AU 1054 4090830 YP_620054.1 CDS Bcen_0167 NC_008060.1 174011 174817 D PFAM: SmpA/OmlA; KEGG: bur:Bcep18194_A3736 outer membrane lipoprotein, SmpA/OmlA; SmpA/OmlA 174011..174817 Burkholderia cenocepacia AU 1054 4090831 YP_620055.1 CDS Bcen_0168 NC_008060.1 174883 175680 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 174883..175680 Burkholderia cenocepacia AU 1054 4090832 YP_620056.1 CDS Bcen_0169 NC_008060.1 175699 176367 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: bur:Bcep18194_A3738 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 175699..176367 Burkholderia cenocepacia AU 1054 4091815 YP_620057.1 CDS Bcen_0170 NC_008060.1 176392 176847 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bur:Bcep18194_A3739 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 176392..176847 Burkholderia cenocepacia AU 1054 4091816 YP_620058.1 CDS leuS NC_008060.1 177140 179734 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 177140..179734 Burkholderia cenocepacia AU 1054 4091817 YP_620059.1 CDS Bcen_0172 NC_008060.1 179794 180324 D PFAM: Rare lipoprotein B; KEGG: bur:Bcep18194_A3741 rare lipoprotein B; rare lipoprotein B 179794..180324 Burkholderia cenocepacia AU 1054 4091818 YP_620060.1 CDS holA NC_008060.1 180343 181437 D required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 180343..181437 Burkholderia cenocepacia AU 1054 4091819 YP_620061.2 CDS proA NC_008060.1 181608 182879 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 181608..182879 Burkholderia cenocepacia AU 1054 4091820 YP_620062.1 CDS Bcen_0175 NC_008060.1 182903 183325 D PFAM: conserved hypothetical protein 701; KEGG: bur:Bcep18194_A3744 hypothetical protein; hypothetical protein 182903..183325 Burkholderia cenocepacia AU 1054 4091821 YP_620063.1 CDS Bcen_0176 NC_008060.1 183419 184267 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_A3745 transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(183419..184267) Burkholderia cenocepacia AU 1054 4091822 YP_620064.1 CDS Bcen_0177 NC_008060.1 184562 186418 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 184562..186418 Burkholderia cenocepacia AU 1054 4091823 YP_620065.1 CDS Bcen_0178 NC_008060.1 186438 187064 D KEGG: bur:Bcep18194_A3747 2-dehydro-3-deoxyphosphogluconate aldolase TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 186438..187064 Burkholderia cenocepacia AU 1054 4091824 YP_620066.1 CDS Bcen_0179 NC_008060.1 187282 188643 D TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: bur:Bcep18194_A3748 gluconate transporter; gluconate transporter 187282..188643 Burkholderia cenocepacia AU 1054 4091825 YP_620067.1 CDS Bcen_0180 NC_008060.1 188657 189160 D KEGG: bur:Bcep18194_A3749 carbohydrate kinase, thermoresistant glucokinase TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase; PFAM: shikimate kinase; carbohydrate kinase 188657..189160 Burkholderia cenocepacia AU 1054 4091826 YP_620068.1 CDS Bcen_0181 NC_008060.1 189232 189879 R PFAM: regulatory protein, TetR; Tetracyclin repressor-like; KEGG: bur:Bcep18194_A3750 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(189232..189879) Burkholderia cenocepacia AU 1054 4091827 YP_620069.1 CDS Bcen_0182 NC_008060.1 190172 191599 D PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3751 FAD dependent oxidoreductase; FAD dependent oxidoreductase 190172..191599 Burkholderia cenocepacia AU 1054 4091828 YP_620070.1 CDS Bcen_0183 NC_008060.1 191676 193064 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(191676..193064) Burkholderia cenocepacia AU 1054 4091829 YP_620071.1 CDS Bcen_0184 NC_008060.1 193216 194295 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3753 transcriptional regulator, LysR family; LysR family transcriptional regulator 193216..194295 Burkholderia cenocepacia AU 1054 4091830 YP_620072.1 CDS Bcen_0185 NC_008060.1 194582 195868 D PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: bur:Bcep18194_A3754 Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase 194582..195868 Burkholderia cenocepacia AU 1054 4091831 YP_620073.1 CDS Bcen_0186 NC_008060.1 196130 197023 D PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_A3755 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein 196130..197023 Burkholderia cenocepacia AU 1054 4091832 YP_620074.1 CDS Bcen_0187 NC_008060.1 197108 197848 D TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A3756 ABC amino acid transporter, inner membrane subunit; amino acid ABC transporter permease 197108..197848 Burkholderia cenocepacia AU 1054 4091833 YP_620075.1 CDS Bcen_0188 NC_008060.1 197848 198525 D TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A3757 ABC amino acid transporter, inner membrane subunit; amino acid ABC transporter permease 197848..198525 Burkholderia cenocepacia AU 1054 4091834 YP_620076.1 CDS Bcen_0189 NC_008060.1 198522 199247 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bte:BTH_I1228 glutamate/aspartate ABC transporter, ATP-binding protein; ABC transporter 198522..199247 Burkholderia cenocepacia AU 1054 4091432 YP_620077.1 CDS Bcen_0190 NC_008060.1 199330 204618 R TIGRFAM: Outer membrane autotransporter barrel; PFAM: Pertactin; Autotransporter beta-domain; KEGG: bur:Bcep18194_A3759 outer membrane autotransporter barrel; Outer membrane autotransporter barrel complement(199330..204618) Burkholderia cenocepacia AU 1054 4091433 YP_620078.1 CDS Bcen_0191 NC_008060.1 205204 206118 R PFAM: glutamine amidotransferase, class-II; KEGG: bur:Bcep18194_A3761 glutamine amidotransferase, class-II; glutamine amidotransferase, class-II complement(205204..206118) Burkholderia cenocepacia AU 1054 4091434 YP_620079.1 CDS Bcen_0192 NC_008060.1 206294 207388 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 206294..207388 Burkholderia cenocepacia AU 1054 4091435 YP_620080.1 CDS Bcen_0193 NC_008060.1 207547 208275 D KEGG: bpm:BURPS1710b_3423 hypothetical protein; hypothetical protein 207547..208275 Burkholderia cenocepacia AU 1054 4091436 YP_620081.1 CDS Bcen_0194 NC_008060.1 208767 209189 R PFAM: OsmC-like protein; KEGG: bur:Bcep18194_A3763 OsmC-like protein; OsmC-like protein complement(208767..209189) Burkholderia cenocepacia AU 1054 4091438 YP_620082.1 CDS Bcen_0195 NC_008060.1 209642 209947 R KEGG: bur:Bcep18194_A3764 hypothetical protein; hypothetical protein complement(209642..209947) Burkholderia cenocepacia AU 1054 4091439 YP_620083.2 CDS rplM NC_008060.1 210259 210687 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 210259..210687 Burkholderia cenocepacia AU 1054 4091440 YP_620084.1 CDS rpsI NC_008060.1 210698 211090 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 210698..211090 Burkholderia cenocepacia AU 1054 4091441 YP_620085.1 CDS Bcen_0198 NC_008060.1 211319 211690 D essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 211319..211690 Burkholderia cenocepacia AU 1054 4091442 YP_620086.1 CDS anmK NC_008060.1 211798 212946 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(211798..212946) Burkholderia cenocepacia AU 1054 4091443 YP_620087.1 CDS Bcen_0200 NC_008060.1 213089 214330 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 213089..214330 Burkholderia cenocepacia AU 1054 4091444 YP_620088.1 CDS Bcen_0201 NC_008060.1 214327 214785 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 214327..214785 Burkholderia cenocepacia AU 1054 4091445 YP_620089.1 CDS Bcen_0202 NC_008060.1 214809 215474 D PFAM: Phosphoglycerate mutase; KEGG: bur:Bcep18194_A3771 phosphoglycerate/bisphosphoglycerate mutase; phosphoglycerate mutase 214809..215474 Burkholderia cenocepacia AU 1054 4091446 YP_620090.1 CDS Bcen_0203 NC_008060.1 215537 216673 R KEGG: bur:Bcep18194_A3772 hypothetical protein; hypothetical protein complement(215537..216673) Burkholderia cenocepacia AU 1054 4091447 YP_620091.1 CDS Bcen_0204 NC_008060.1 216819 217772 R KEGG: bur:Bcep18194_A3773 hypothetical protein; hypothetical protein complement(216819..217772) Burkholderia cenocepacia AU 1054 4091448 YP_620092.1 CDS ruvB NC_008060.1 217796 218866 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(217796..218866) Burkholderia cenocepacia AU 1054 4091449 YP_620093.1 CDS ruvA NC_008060.1 218975 219556 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(218975..219556) Burkholderia cenocepacia AU 1054 4090772 YP_620094.1 CDS ruvC NC_008060.1 219757 220299 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(219757..220299) Burkholderia cenocepacia AU 1054 4090773 YP_620095.1 CDS purH NC_008060.1 220454 222019 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(220454..222019) Burkholderia cenocepacia AU 1054 4090774 YP_620096.1 CDS Bcen_0209 NC_008060.1 222294 223361 R TIGRFAM: Dihydrouridine synthase TIM-barrel protein nifR3; PFAM: dihydrouridine synthase, DuS; KEGG: bur:Bcep18194_A3779 dihydrouridine synthase TIM-barrel protein nifR3; dihydrouridine synthase TIM-barrel protein nifR3 complement(222294..223361) Burkholderia cenocepacia AU 1054 4090775 YP_620097.1 CDS Bcen_0210 NC_008060.1 223499 224686 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3780 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; hypothetical protein complement(223499..224686) Burkholderia cenocepacia AU 1054 4090776 YP_620098.1 CDS Bcen_0211 NC_008060.1 224724 226109 R PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase-like; KEGG: bur:Bcep18194_A3781 peptidase M24B; peptidase M24 complement(224724..226109) Burkholderia cenocepacia AU 1054 4090777 YP_620099.1 CDS Bcen_0212 NC_008060.1 226294 226911 D PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_A3782 glutathione S-transferase-like; glutathione S-transferase 226294..226911 Burkholderia cenocepacia AU 1054 4090778 YP_620100.1 CDS Bcen_0213 NC_008060.1 227022 228641 R PFAM: ferredoxin-dependent glutamate synthase; KEGG: bur:Bcep18194_A3783 glutamate synthase (NADPH); glutamate synthase (NADPH) complement(227022..228641) Burkholderia cenocepacia AU 1054 4090779 YP_620101.1 CDS mnmA NC_008060.1 228760 229935 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(228760..229935) Burkholderia cenocepacia AU 1054 4090780 YP_620102.1 CDS Bcen_0215 NC_008060.1 229932 230450 R PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A3785 NUDIX hydrolase; NUDIX hydrolase complement(229932..230450) Burkholderia cenocepacia AU 1054 4090781 YP_620103.1 CDS Bcen_0216 NC_008060.1 230720 231859 D PFAM: alanine dehydrogenase/PNT-like; KEGG: bur:Bcep18194_A3786 NAD(P)(+) transhydrogenase (AB-specific); alanine dehydrogenase/PNT-like protein 230720..231859 Burkholderia cenocepacia AU 1054 4090782 YP_620104.1 CDS Bcen_0217 NC_008060.1 231871 232197 D KEGG: bur:Bcep18194_A3787 NAD/NADP transhydrogenase alpha subunit-like; NAD/NADP transhydrogenase subunit alpha-like 231871..232197 Burkholderia cenocepacia AU 1054 4090783 YP_620105.1 CDS Bcen_0218 NC_008060.1 232194 233648 D PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: bur:Bcep18194_A3788 NAD(P) transhydrogenase, beta subunit; NAD(P) transhydrogenase subunit beta 232194..233648 Burkholderia cenocepacia AU 1054 4090784 YP_620106.1 CDS Bcen_0219 NC_008060.1 233740 234660 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3789 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(233740..234660) Burkholderia cenocepacia AU 1054 4090785 YP_620107.1 CDS Bcen_0220 NC_008060.1 234750 235673 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bur:Bcep18194_A3790 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 234750..235673 Burkholderia cenocepacia AU 1054 4090786 YP_620108.1 CDS Bcen_0221 NC_008060.1 235754 236440 R PFAM: Helix-turn-helix, type 11; KEGG: bur:Bcep18194_A3791 transcriptional regulator; type 11 helix-turn-helix protein complement(235754..236440) Burkholderia cenocepacia AU 1054 4090787 YP_620109.1 CDS Bcen_0222 NC_008060.1 236514 236918 R KEGG: bur:Bcep18194_A3792 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(236514..236918) Burkholderia cenocepacia AU 1054 4090788 YP_620110.1 CDS Bcen_0223 NC_008060.1 237071 237232 D KEGG: bur:Bcep18194_A3794 hypothetical protein; hypothetical protein 237071..237232 Burkholderia cenocepacia AU 1054 4090789 YP_620111.1 CDS Bcen_0224 NC_008060.1 237306 238610 R PFAM: RNA methylase; THUMP; KEGG: bur:Bcep18194_A3795 RNA methylase; RNA methylase complement(237306..238610) Burkholderia cenocepacia AU 1054 4090790 YP_620112.1 CDS Bcen_0225 NC_008060.1 238765 240879 R KEGG: bur:Bcep18194_A3796 site-specific recombinase-like; site-specific recombinase-like protein complement(238765..240879) Burkholderia cenocepacia AU 1054 4090791 YP_620113.1 CDS Bcen_0226 NC_008060.1 241357 242073 R PFAM: protein of unknown function DUF330; KEGG: bur:Bcep18194_A3798 protein of unknown function DUF330; hypothetical protein complement(241357..242073) Burkholderia cenocepacia AU 1054 4090833 YP_620114.1 CDS Bcen_0227 NC_008060.1 242070 243689 R PFAM: Mammalian cell entry related; KEGG: bur:Bcep18194_A3799 mammalian cell entry related-protein; hypothetical protein complement(242070..243689) Burkholderia cenocepacia AU 1054 4090834 YP_620115.1 CDS Bcen_0228 NC_008060.1 243682 244317 R PFAM: Paraquat-inducible protein A; KEGG: bur:Bcep18194_A3800 paraquat-inducible protein A; paraquat-inducible protein A complement(243682..244317) Burkholderia cenocepacia AU 1054 4090835 YP_620116.1 CDS Bcen_0229 NC_008060.1 244314 244979 R PFAM: Paraquat-inducible protein A; KEGG: bur:Bcep18194_A3801 paraquat-inducible protein A; paraquat-inducible protein A complement(244314..244979) Burkholderia cenocepacia AU 1054 4090836 YP_620117.1 CDS Bcen_0230 NC_008060.1 245239 245799 D PFAM: cytochrome B561; KEGG: bur:Bcep18194_A3802 cytochrome b561; cytochrome B561 245239..245799 Burkholderia cenocepacia AU 1054 4090837 YP_620118.1 CDS Bcen_0231 NC_008060.1 245808 246368 D PFAM: YceI; KEGG: bur:Bcep18194_A3803 conserved hypothetical protein, YceI; YceI 245808..246368 Burkholderia cenocepacia AU 1054 4090838 YP_620119.1 CDS Bcen_0232 NC_008060.1 246434 247015 D PFAM: YceI; KEGG: bur:Bcep18194_A3804 conserved hypothetical protein, YceI; YceI 246434..247015 Burkholderia cenocepacia AU 1054 4090839 YP_620120.1 CDS Bcen_0233 NC_008060.1 247208 248485 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3805 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 247208..248485 Burkholderia cenocepacia AU 1054 4090840 YP_620121.1 CDS Bcen_0234 NC_008060.1 248504 249913 R PFAM: PDZ/DHR/GLGF; peptidase S41; KEGG: bur:Bcep18194_A3806 peptidase S41; peptidase S41 complement(248504..249913) Burkholderia cenocepacia AU 1054 4090841 YP_620122.1 CDS secF NC_008060.1 250255 251205 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(250255..251205) Burkholderia cenocepacia AU 1054 4090842 YP_620123.1 CDS secD NC_008060.1 251224 253245 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(251224..253245) Burkholderia cenocepacia AU 1054 4090843 YP_620124.1 CDS yajC NC_008060.1 253352 253675 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(253352..253675) Burkholderia cenocepacia AU 1054 4090844 YP_620125.1 CDS tgt NC_008060.1 253913 255256 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(253913..255256) Burkholderia cenocepacia AU 1054 4090845 YP_620126.1 CDS queA NC_008060.1 255280 256347 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(255280..256347) Burkholderia cenocepacia AU 1054 4090846 YP_620127.1 CDS Bcen_0240 NC_008060.1 256521 258836 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 256521..258836 Burkholderia cenocepacia AU 1054 4090847 YP_620128.1 CDS Bcen_0241 NC_008060.1 258984 259943 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3813 transcriptional regulator, LysR family; LysR family transcriptional regulator 258984..259943 Burkholderia cenocepacia AU 1054 4090848 YP_620129.1 CDS Bcen_0242 NC_008060.1 260575 262761 D KEGG: bur:Bcep18194_A3814 haem catalase/peroxidase TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI 260575..262761 Burkholderia cenocepacia AU 1054 4090849 YP_620130.1 CDS Bcen_0243 NC_008060.1 262839 263117 D hypothetical protein 262839..263117 Burkholderia cenocepacia AU 1054 4090850 YP_620131.1 CDS Bcen_0244 NC_008060.1 263130 263618 D PFAM: Ferritin and Dps; KEGG: bps:BPSL2863 ferritin DPS-family DNA binding protein; Ferritin and Dps 263130..263618 Burkholderia cenocepacia AU 1054 4090851 YP_620132.1 CDS ubiA NC_008060.1 263825 264688 D catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 263825..264688 Burkholderia cenocepacia AU 1054 4090852 YP_620133.1 CDS Bcen_0246 NC_008060.1 264790 265602 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(264790..265602) Burkholderia cenocepacia AU 1054 4090853 YP_620134.1 CDS Bcen_0247 NC_008060.1 265656 266375 R TIGRFAM: Protein of unknown function UPF0001; PFAM: alanine racemase-like; KEGG: bur:Bcep18194_A3817 protein of unknown function UPF0001; hypothetical protein complement(265656..266375) Burkholderia cenocepacia AU 1054 4090854 YP_620135.1 CDS glcF NC_008060.1 266493 267719 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; protein of unknown function DUF224, cysteine-rich region; KEGG: bur:Bcep18194_A3818 hypothetical protein; glycolate oxidase iron-sulfur subunit complement(266493..267719) Burkholderia cenocepacia AU 1054 4090855 YP_620136.1 CDS glcE NC_008060.1 267727 268815 R PFAM: FAD linked oxidase-like; KEGG: bur:Bcep18194_A3819 FAD linked oxidase-like; glycolate oxidase FAD binding subunit complement(267727..268815) Burkholderia cenocepacia AU 1054 4090856 YP_620137.1 CDS Bcen_0250 NC_008060.1 269001 270494 R PFAM: FAD linked oxidase-like; KEGG: bur:Bcep18194_A3820 FAD linked oxidase-like; FAD linked oxidase-like protein complement(269001..270494) Burkholderia cenocepacia AU 1054 4090857 YP_620138.1 CDS Bcen_0251 NC_008060.1 270533 271891 R PFAM: FAD linked oxidase-like; KEGG: bur:Bcep18194_A3821 FAD linked oxidase-like; FAD linked oxidase-like protein complement(270533..271891) Burkholderia cenocepacia AU 1054 4090858 YP_620139.1 CDS Bcen_0252 NC_008060.1 272079 272630 D TIGRFAM: ATP; PFAM: cobalamin adenosyltransferase; KEGG: bur:Bcep18194_A3822 cobalamin adenosyltransferase; cobalamin adenosyltransferase 272079..272630 Burkholderia cenocepacia AU 1054 4090859 YP_620140.1 CDS Bcen_0253 NC_008060.1 272725 273933 D PFAM: globin; oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: bur:Bcep18194_A3823 hemoglobin-like flavoprotein; globin 272725..273933 Burkholderia cenocepacia AU 1054 4090860 YP_620141.1 CDS Bcen_0254 NC_008060.1 274010 275083 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(274010..275083) Burkholderia cenocepacia AU 1054 4090861 YP_620142.1 CDS Bcen_0255 NC_008060.1 275482 276948 R PFAM: peptidase U62, modulator of DNA gyrase; KEGG: bur:Bcep18194_A3827 peptidase U62, modulator of DNA gyrase; C69 family peptidase complement(275482..276948) Burkholderia cenocepacia AU 1054 4090862 YP_620143.1 CDS Bcen_0256 NC_008060.1 277033 277860 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bur:Bcep18194_A3828 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(277033..277860) Burkholderia cenocepacia AU 1054 4090863 YP_620144.1 CDS Bcen_0257 NC_008060.1 277923 282122 R TIGRFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A3829 hypothetical protein; hypothetical protein complement(277923..282122) Burkholderia cenocepacia AU 1054 4090864 YP_620145.1 CDS Bcen_0258 NC_008060.1 282164 285163 D catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 282164..285163 Burkholderia cenocepacia AU 1054 4090865 YP_620146.1 CDS Bcen_0259 NC_008060.1 285306 286955 R KEGG: bur:Bcep18194_A3831 DNA repair protein RecN TIGRFAM: DNA repair protein RecN; PFAM: SMC protein-like; SMART: ATPase; DNA repair protein RecN complement(285306..286955) Burkholderia cenocepacia AU 1054 4090866 YP_620147.1 CDS ppnK NC_008060.1 286975 287877 R catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein complement(286975..287877) Burkholderia cenocepacia AU 1054 4090867 YP_620148.1 CDS hrcA NC_008060.1 288009 289031 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 288009..289031 Burkholderia cenocepacia AU 1054 4090868 YP_620149.1 CDS hemH NC_008060.1 289188 290252 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 289188..290252 Burkholderia cenocepacia AU 1054 4090869 YP_620150.1 CDS Bcen_0263 NC_008060.1 290337 290744 D PFAM: RNA-binding S4; KEGG: bur:Bcep18194_A3836 RNA-binding S4; RNA-binding S4 290337..290744 Burkholderia cenocepacia AU 1054 4090870 YP_620151.1 CDS Bcen_0264 NC_008060.1 290716 290877 R KEGG: bte:BTH_I1305 hypothetical protein; hypothetical protein complement(290716..290877) Burkholderia cenocepacia AU 1054 4090871 YP_620152.1 CDS Bcen_0265 NC_008060.1 290934 291152 R hypothetical protein complement(290934..291152) Burkholderia cenocepacia AU 1054 4092213 YP_620153.1 CDS Bcen_0266 NC_008060.1 291230 291775 D with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 291230..291775 Burkholderia cenocepacia AU 1054 4092214 YP_620154.1 CDS Bcen_0267 NC_008060.1 291786 292229 D KEGG: bur:Bcep18194_A3838 hypothetical protein; hypothetical protein 291786..292229 Burkholderia cenocepacia AU 1054 4092215 YP_620155.1 CDS dnaK NC_008060.1 292378 294330 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 292378..294330 Burkholderia cenocepacia AU 1054 4092216 YP_620156.1 CDS Bcen_0269 NC_008060.1 294587 295723 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 294587..295723 Burkholderia cenocepacia AU 1054 4092217 YP_620157.1 CDS Bcen_0270 NC_008060.1 295728 297641 D TIGRFAM: para-aminobenzoate synthase, component I; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: bur:Bcep18194_A3841 anthranilate synthase component I and chorismate binding protein; para-aminobenzoate synthase, component I 295728..297641 Burkholderia cenocepacia AU 1054 4092218 YP_620158.1 CDS panB NC_008060.1 297764 298579 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(297764..298579) Burkholderia cenocepacia AU 1054 4092219 YP_620159.1 CDS Bcen_0272 NC_008060.1 298623 299309 R PFAM: deoxynucleoside kinase; KEGG: bur:Bcep18194_A3843 deoxynucleoside kinase; deoxynucleoside kinase complement(298623..299309) Burkholderia cenocepacia AU 1054 4092220 YP_620160.1 CDS Bcen_0273 NC_008060.1 299306 299848 R KEGG: bur:Bcep18194_A3844 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(299306..299848) Burkholderia cenocepacia AU 1054 4092221 YP_620161.1 CDS Bcen_0274 NC_008060.1 299884 301440 R TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; KEGG: bur:Bcep18194_A3845 poly(A) polymerase, PcnB; poly(A) polymerase complement(299884..301440) Burkholderia cenocepacia AU 1054 4092222 YP_620162.1 CDS Bcen_0275 NC_008060.1 301446 302123 R TIGRFAM: HAD-superfamily hydrolase subfamily IB, PSPase-like; HAD-superfamily subfamily IB, PSPase-like; KEGG: bur:Bcep18194_A3846 HAD-superfamily subfamily IB, PSPase-like; HAD family hydrolase complement(301446..302123) Burkholderia cenocepacia AU 1054 4092223 YP_620163.1 CDS Bcen_0276 NC_008060.1 302135 302920 R PFAM: Chromosomal replication initiator, DnaA; KEGG: bur:Bcep18194_A3847 DNA replication initiation-like ATPase; DnaA regulatory inactivator Hda complement(302135..302920) Burkholderia cenocepacia AU 1054 4092224 YP_620164.1 CDS Bcen_0277 NC_008060.1 303123 304178 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 303123..304178 Burkholderia cenocepacia AU 1054 4092225 YP_620165.1 CDS Bcen_0278 NC_008060.1 304277 305476 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3850 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(304277..305476) Burkholderia cenocepacia AU 1054 4092226 YP_620166.1 CDS Bcen_0279 NC_008060.1 305533 306165 D PFAM: regulatory protein, TetR; Tetracyclin repressor-like; KEGG: bur:Bcep18194_A3851 transcriptional regulator, TetR family; TetR family transcriptional regulator 305533..306165 Burkholderia cenocepacia AU 1054 4092227 YP_620167.1 CDS miaA NC_008060.1 306170 307144 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(306170..307144) Burkholderia cenocepacia AU 1054 4092228 YP_620168.1 CDS mutL NC_008060.1 307141 309144 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(307141..309144) Burkholderia cenocepacia AU 1054 4092229 YP_620169.1 CDS Bcen_0282 NC_008060.1 309276 310010 D KEGG: bur:Bcep18194_A3854 DedA family transmembrane protein; DedA family transmembrane protein 309276..310010 Burkholderia cenocepacia AU 1054 4092230 YP_620170.1 CDS Bcen_0284 NC_008060.1 311458 312270 R PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_A3855 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel complement(311458..312270) Burkholderia cenocepacia AU 1054 4092385 YP_620171.1 CDS Bcen_0285 NC_008060.1 312418 314346 R PFAM: Capsule polysaccharide biosynthesis; KEGG: bte:BTH_I1325 WcbA; capsule polysaccharide biosynthesis complement(312418..314346) Burkholderia cenocepacia AU 1054 4092386 YP_620172.1 CDS Bcen_0287 NC_008060.1 315656 316885 D PFAM: polysaccharide export protein; KEGG: bte:BTH_I1327 WcbC; polysaccharide export protein 315656..316885 Burkholderia cenocepacia AU 1054 4092388 YP_620173.1 CDS Bcen_0288 NC_008060.1 317117 319246 R PFAM: glycosyl transferase, family 2; KEGG: pst:PSPTO1074 glycosyl transferase, group 2 family protein; glycosyl transferase family protein complement(317117..319246) Burkholderia cenocepacia AU 1054 4092389 YP_620174.1 CDS Bcen_0289 NC_008060.1 319709 321103 R KEGG: sye:Syncc9902_1622 hypothetical protein; hypothetical protein complement(319709..321103) Burkholderia cenocepacia AU 1054 4092390 YP_620175.1 CDS Bcen_0290 NC_008060.1 321100 322314 R PFAM: glycosyl transferase, group 1; KEGG: ppu:PP1786 glycosyl transferase; group 1 glycosyl transferase complement(321100..322314) Burkholderia cenocepacia AU 1054 4092391 YP_620176.1 CDS Bcen_0291 NC_008060.1 322332 324554 R PFAM: glycosyl transferase, group 1; KEGG: ppu:PP1786 glycosyl transferase; group 1 glycosyl transferase complement(322332..324554) Burkholderia cenocepacia AU 1054 4092392 YP_620177.1 CDS Bcen_0292 NC_008060.1 324661 325317 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bte:BTH_I1335 BexA; ABC transporter complement(324661..325317) Burkholderia cenocepacia AU 1054 4092393 YP_620178.1 CDS Bcen_0293 NC_008060.1 325314 326096 R PFAM: ABC transporter; KEGG: bpm:BURPS1710b_3299 capsule polysaccharide export inner-membrane protein; ABC transporter complement(325314..326096) Burkholderia cenocepacia AU 1054 4092394 YP_620179.1 CDS Bcen_0294 NC_008060.1 326342 327181 D PFAM: Integrase, catalytic region; KEGG: transposase B; integrase catalytic subunit 326342..327181 Burkholderia cenocepacia AU 1054 4092395 YP_620180.1 CDS Bcen_0295 NC_008060.1 327312 328460 R PFAM: lipopolysaccharide biosynthesis; KEGG: bte:BTH_I1337 WcbD; lipopolysaccharide biosynthesis protein complement(327312..328460) Burkholderia cenocepacia AU 1054 4092396 YP_620181.1 CDS Bcen_0296 NC_008060.1 329710 330915 D PFAM: Capsule polysaccharide biosynthesis; KEGG: bte:BTH_I1338 WcbO; capsule polysaccharide biosynthesis 329710..330915 Burkholderia cenocepacia AU 1054 4092397 YP_620182.1 CDS Bcen_0297 NC_008060.1 330984 331694 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bte:BTH_I1339 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 330984..331694 Burkholderia cenocepacia AU 1054 4092398 YP_620183.1 CDS Bcen_0298 NC_008060.1 331744 333234 D PFAM: sulfatase; KEGG: bur:Bcep18194_A3872 sulfatase; sulfatase 331744..333234 Burkholderia cenocepacia AU 1054 4092399 YP_620184.1 CDS Bcen_0299 NC_008060.1 333238 340872 D PFAM: beta-ketoacyl synthase; acyl transferase region; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; Methyltransferase type 12; KEGG: bur:Bcep18194_A3873 beta-ketoacyl synthase; beta-ketoacyl synthase 333238..340872 Burkholderia cenocepacia AU 1054 4092400 YP_620185.1 CDS Bcen_0300 NC_008060.1 340869 341786 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 340869..341786 Burkholderia cenocepacia AU 1054 4092401 YP_620186.1 CDS Bcen_0301 NC_008060.1 341851 343179 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aminotransferase, class I and II; KEGG: bur:Bcep18194_A3875 glycine C-acetyltransferase; 8-amino-7-oxononanoate synthase 341851..343179 Burkholderia cenocepacia AU 1054 4092402 YP_620187.1 CDS Bcen_0302 NC_008060.1 343176 343856 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A3876 hypothetical protein; N-acetyltransferase GCN5 343176..343856 Burkholderia cenocepacia AU 1054 4092403 YP_620188.1 CDS Bcen_0303 NC_008060.1 343953 344516 R PFAM: adenylylsulfate kinase; KEGG: reu:Reut_A1530 adenylylsulfate kinase:sulfate adenylyltransferase, large subunit; adenylylsulfate kinase complement(343953..344516) Burkholderia cenocepacia AU 1054 4092404 YP_620189.1 CDS Bcen_0304 NC_008060.1 345232 346065 R PFAM: glutamine amidotransferase, class-II; KEGG: bur:Bcep18194_A3877 glutamine amidotransferase, class-II; glutamine amidotransferase, class-II complement(345232..346065) Burkholderia cenocepacia AU 1054 4092329 YP_620190.1 CDS Bcen_0305 NC_008060.1 346264 346593 R TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_A3878 alkylhydroperoxidase AhpD core; alkylhydroperoxidase AhpD core complement(346264..346593) Burkholderia cenocepacia AU 1054 4092330 YP_620191.1 CDS Bcen_0306 NC_008060.1 346723 347670 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_A3879 transcriptional regulator, AraC family; AraC family transcriptional regulator 346723..347670 Burkholderia cenocepacia AU 1054 4092331 YP_620192.1 CDS Bcen_0307 NC_008060.1 347774 348217 D PFAM: YiaAB two helix; KEGG: bur:Bcep18194_A3880 YiaAB two helix membrane protein; YiaAB two helix 347774..348217 Burkholderia cenocepacia AU 1054 4092332 YP_620193.1 CDS Bcen_0308 NC_008060.1 348340 349374 R KEGG: bbr:BB0493 plasmid-related protein; plasmid-like protein complement(348340..349374) Burkholderia cenocepacia AU 1054 4092333 YP_620194.1 CDS Bcen_0309 NC_008060.1 349376 349963 R KEGG: bbr:BB0494 hypothetical 20.3 kDa protein; hypothetical protein complement(349376..349963) Burkholderia cenocepacia AU 1054 4092334 YP_620195.1 CDS Bcen_0310 NC_008060.1 350221 350544 R KEGG: psp:PSPPH_A0142 hypothetical protein; transcriptional modulator of MazE/toxin MazF complement(350221..350544) Burkholderia cenocepacia AU 1054 4092335 YP_620196.1 CDS Bcen_0311 NC_008060.1 350541 350753 R KEGG: plt:Plut_1918 hypothetical protein; hypothetical protein complement(350541..350753) Burkholderia cenocepacia AU 1054 4092336 YP_620197.1 CDS Bcen_0312 NC_008060.1 350866 351345 R hypothetical protein complement(350866..351345) Burkholderia cenocepacia AU 1054 4092337 YP_620198.1 CDS Bcen_0313 NC_008060.1 351413 351883 R hypothetical protein complement(351413..351883) Burkholderia cenocepacia AU 1054 4092338 YP_620199.1 CDS Bcen_0314 NC_008060.1 351916 352266 D SMART: Helix-turn-helix type 3; KEGG: rso:RSc1907 DNA-binding repressor transcription regulator protein; XRE family transcriptional regulator 351916..352266 Burkholderia cenocepacia AU 1054 4092339 YP_620200.1 CDS Bcen_0315 NC_008060.1 352695 353444 R KEGG: bur:Bcep18194_A3887 hypothetical protein; hypothetical protein complement(352695..353444) Burkholderia cenocepacia AU 1054 4092341 YP_620201.1 CDS Bcen_0316 NC_008060.1 353464 353976 R PFAM: OmpA/MotB; KEGG: bur:Bcep18194_A3888 outer membrane protein, OmpA/MotB family; OmpA/MotB complement(353464..353976) Burkholderia cenocepacia AU 1054 4092342 YP_620202.1 CDS tolB NC_008060.1 353994 355289 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(353994..355289) Burkholderia cenocepacia AU 1054 4092343 YP_620203.1 CDS Bcen_0318 NC_008060.1 355399 356454 R TIGRFAM: TonB-like; PFAM: TolA; KEGG: bur:Bcep18194_A3890 TonB/TolA-like protein; TonB-like protein complement(355399..356454) Burkholderia cenocepacia AU 1054 4092344 YP_620204.1 CDS Bcen_0319 NC_008060.1 356451 356900 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bur:Bcep18194_A3891 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(356451..356900) Burkholderia cenocepacia AU 1054 4092345 YP_620205.1 CDS Bcen_0320 NC_008060.1 356911 357588 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: bur:Bcep18194_A3892 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(356911..357588) Burkholderia cenocepacia AU 1054 4092346 YP_620206.1 CDS Bcen_0321 NC_008060.1 357733 358218 R TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily; KEGG: bur:Bcep18194_A3893 4-hydroxybenzoyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase complement(357733..358218) Burkholderia cenocepacia AU 1054 4090794 YP_620207.1 CDS Bcen_0322 NC_008060.1 358326 359072 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bte:BTH_I1378 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR complement(358326..359072) Burkholderia cenocepacia AU 1054 4090795 YP_620208.2 CDS glyA NC_008060.1 359491 360738 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 359491..360738 Burkholderia cenocepacia AU 1054 4090796 YP_620209.1 CDS nrdR NC_008060.1 360745 361224 D TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone; KEGG: bur:Bcep18194_A3896 protein of unknown function DUF193; NrdR family transcriptional regulator 360745..361224 Burkholderia cenocepacia AU 1054 4090797 YP_620210.1 CDS Bcen_0325 NC_008060.1 361376 361798 D KEGG: bur:Bcep18194_A3901 Tfp pilus assembly protein PilE; hypothetical protein 361376..361798 Burkholderia cenocepacia AU 1054 4090798 YP_620211.1 CDS Bcen_0326 NC_008060.1 361741 362184 R KEGG: bur:Bcep18194_A3902 hypothetical protein; hypothetical protein complement(361741..362184) Burkholderia cenocepacia AU 1054 4090799 YP_620212.1 CDS Bcen_0327 NC_008060.1 362228 362617 R KEGG: bur:Bcep18194_A3903 membrane protein; membrane protein complement(362228..362617) Burkholderia cenocepacia AU 1054 4090800 YP_620213.1 CDS Bcen_0328 NC_008060.1 362736 363038 R PFAM: protein of unknown function DUF883, ElaB; KEGG: bur:Bcep18194_A3904 protein of unknown function DUF883, ElaB; hypothetical protein complement(362736..363038) Burkholderia cenocepacia AU 1054 4090801 YP_620214.1 CDS Bcen_0329 NC_008060.1 363357 363995 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin; KEGG: bur:Bcep18194_A3905 peroxidase; peroxidase 363357..363995 Burkholderia cenocepacia AU 1054 4090802 YP_620215.1 CDS Bcen_0330 NC_008060.1 364116 365303 R PFAM: acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_A3906 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase complement(364116..365303) Burkholderia cenocepacia AU 1054 4090803 YP_620216.1 CDS Bcen_0331 NC_008060.1 365582 366373 D PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_A3907 transcriptional regulator, IclR family; IclR family transcriptional regulator 365582..366373 Burkholderia cenocepacia AU 1054 4090804 YP_620217.1 CDS Bcen_0332 NC_008060.1 366526 367167 D PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: bur:Bcep18194_A3908 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 366526..367167 Burkholderia cenocepacia AU 1054 4090805 YP_620218.1 CDS Bcen_0333 NC_008060.1 367127 367930 R PFAM: EAL; KEGG: bur:Bcep18194_A3909 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase complement(367127..367930) Burkholderia cenocepacia AU 1054 4090806 YP_620219.1 CDS Bcen_0334 NC_008060.1 368287 369948 D PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3910 monooxygenase, FAD-binding; FAD-dependent oxidoreductase 368287..369948 Burkholderia cenocepacia AU 1054 4090807 YP_620220.1 CDS Bcen_0335 NC_008060.1 369977 370207 D KEGG: bur:Bcep18194_A3911 hypothetical protein; hypothetical protein 369977..370207 Burkholderia cenocepacia AU 1054 4090808 YP_620221.1 CDS Bcen_0336 NC_008060.1 370204 371562 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3912 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 370204..371562 Burkholderia cenocepacia AU 1054 4090809 YP_620222.1 CDS Bcen_0337 NC_008060.1 371579 372913 D An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 371579..372913 Burkholderia cenocepacia AU 1054 4090810 YP_620223.1 CDS Bcen_0338 NC_008060.1 372910 374214 D KEGG: bur:Bcep18194_A3914 fumarylacetoacetase TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetase 372910..374214 Burkholderia cenocepacia AU 1054 4090811 YP_620224.1 CDS Bcen_0339 NC_008060.1 374424 375584 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3915 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(374424..375584) Burkholderia cenocepacia AU 1054 4090812 YP_620225.1 CDS Bcen_0340 NC_008060.1 375678 376847 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3916 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(375678..376847) Burkholderia cenocepacia AU 1054 4090813 YP_620226.1 CDS Bcen_0341 NC_008060.1 377073 377816 R TIGRFAM: Cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: bur:Bcep18194_A3917 nitroreductase; Cob(II)yrinic acid a,c-diamide reductase complement(377073..377816) Burkholderia cenocepacia AU 1054 4092837 YP_620227.1 CDS Bcen_0342 NC_008060.1 377989 378987 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A3918 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(377989..378987) Burkholderia cenocepacia AU 1054 4092838 YP_620228.1 CDS Bcen_0343 NC_008060.1 379018 380001 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3919 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(379018..380001) Burkholderia cenocepacia AU 1054 4092839 YP_620229.1 CDS Bcen_0344 NC_008060.1 380775 381986 D PFAM: aminotransferase, class V; KEGG: bur:Bcep18194_A3920 aminotransferase, class V; class V aminotransferase 380775..381986 Burkholderia cenocepacia AU 1054 4092840 YP_620230.1 CDS Bcen_0345 NC_008060.1 382014 382949 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_A3921 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(382014..382949) Burkholderia cenocepacia AU 1054 4092841 YP_620231.1 CDS Bcen_0346 NC_008060.1 383084 383974 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_A3922 protein of unknown function DUF6, transmembrane; hypothetical protein 383084..383974 Burkholderia cenocepacia AU 1054 4092842 YP_620232.2 CDS Bcen_0347 NC_008060.1 384097 385311 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3923 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily transporter complement(384097..385311) Burkholderia cenocepacia AU 1054 4092843 YP_620233.1 CDS Bcen_0348 NC_008060.1 385647 387233 D PFAM: ferredoxin; molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding; CO dehydrogenase flavoprotein-like; KEGG: bur:Bcep18194_A3924 molybdopterin dehydrogenase, FAD-binding; molybdopterin dehydrogenase 385647..387233 Burkholderia cenocepacia AU 1054 4092844 YP_620234.1 CDS Bcen_0349 NC_008060.1 387252 389615 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bur:Bcep18194_A3925 xanthine dehydrogenase; xanthine dehydrogenase 387252..389615 Burkholderia cenocepacia AU 1054 4092845 YP_620235.1 CDS Bcen_0350 NC_008060.1 389703 390371 D KEGG: bur:Bcep18194_A3926 xanthine and CO dehydrogenases maturation factor XdhC/CoxF family-like; xanthine and Co dehydrogenase maturation factor 389703..390371 Burkholderia cenocepacia AU 1054 4092846 YP_620236.1 CDS Bcen_0351 NC_008060.1 390517 390918 D KEGG: bur:Bcep18194_A3927 hypothetical protein; hypothetical protein 390517..390918 Burkholderia cenocepacia AU 1054 4092847 YP_620237.1 CDS Bcen_0352 NC_008060.1 390980 391924 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3928 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(390980..391924) Burkholderia cenocepacia AU 1054 4092848 YP_620238.1 CDS Bcen_0353 NC_008060.1 392004 392642 R PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_A3929 DsbA oxidoreductase; DSBA oxidoreductase complement(392004..392642) Burkholderia cenocepacia AU 1054 4092849 YP_620239.1 CDS Bcen_0354 NC_008060.1 392785 394047 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902; KEGG: bte:BTH_II1545 ISBma3, transposase; transposase IS116/IS110/IS902 complement(392785..394047) Burkholderia cenocepacia AU 1054 4092850 YP_620240.1 CDS Bcen_0355 NC_008060.1 394193 395755 R KEGG: bur:Bcep18194_A3930 TRAP-type uncharacterized transport system periplasmic component-like; TRAP-type transport system periplasmic protein complement(394193..395755) Burkholderia cenocepacia AU 1054 4092851 YP_620241.1 CDS Bcen_0356 NC_008060.1 396069 396434 D PFAM: transport-associated; KEGG: bur:Bcep18194_A3931 transport-associated protein; transport-associated 396069..396434 Burkholderia cenocepacia AU 1054 4092852 YP_620242.1 CDS Bcen_0357 NC_008060.1 396573 398663 D KEGG: bur:Bcep18194_A3932 hypothetical protein; hypothetical protein 396573..398663 Burkholderia cenocepacia AU 1054 4092853 YP_620243.1 CDS Bcen_0358 NC_008060.1 399280 401115 D PFAM: peptidase S10, serine carboxypeptidase; KEGG: bur:Bcep18194_A3933 carboxypeptidase C (cathepsin A)-like; peptidase S10, serine carboxypeptidase 399280..401115 Burkholderia cenocepacia AU 1054 4092854 YP_620244.1 CDS Bcen_0359 NC_008060.1 401373 401963 D PFAM: DNA polymerase, beta-like region; KEGG: hch:HCH_05728 probable transcriptional regulator; DNA polymerase, beta-like region 401373..401963 Burkholderia cenocepacia AU 1054 4092855 YP_620245.1 CDS Bcen_0360 NC_008060.1 401963 402400 D hypothetical protein 401963..402400 Burkholderia cenocepacia AU 1054 4091489 YP_620246.1 CDS Bcen_0361 NC_008060.1 402487 403275 R PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_A3934 protein of unknown function DUF81; hypothetical protein complement(402487..403275) Burkholderia cenocepacia AU 1054 4091490 YP_620247.1 CDS Bcen_0362 NC_008060.1 403607 405046 R TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3935 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(403607..405046) Burkholderia cenocepacia AU 1054 4091491 YP_620248.1 CDS Bcen_0363 NC_008060.1 405164 405895 R PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_A3936 DsbA oxidoreductase; DSBA oxidoreductase complement(405164..405895) Burkholderia cenocepacia AU 1054 4091492 YP_620249.1 CDS Bcen_0364 NC_008060.1 406078 406800 R PFAM: YheO-like; KEGG: bur:Bcep18194_A3937 hypothetical protein; YheO-like protein complement(406078..406800) Burkholderia cenocepacia AU 1054 4091493 YP_620250.1 CDS Bcen_0365 NC_008060.1 406869 407843 R PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bur:Bcep18194_A3938 ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase/mu-crystallin complement(406869..407843) Burkholderia cenocepacia AU 1054 4091494 YP_620251.1 CDS Bcen_0366 NC_008060.1 408222 409001 D PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_A3939 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein 408222..409001 Burkholderia cenocepacia AU 1054 4091495 YP_620252.1 CDS Bcen_0367 NC_008060.1 409068 410312 D PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3940 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 409068..410312 Burkholderia cenocepacia AU 1054 4091496 YP_620253.1 CDS Bcen_0368 NC_008060.1 410328 410693 D hypothetical protein 410328..410693 Burkholderia cenocepacia AU 1054 4091497 YP_620254.1 CDS Bcen_0369 NC_008060.1 410825 413800 D KEGG: bur:Bcep18194_A3941 hypothetical protein; hypothetical protein 410825..413800 Burkholderia cenocepacia AU 1054 4091498 YP_620255.1 CDS Bcen_0370 NC_008060.1 413770 414081 R hypothetical protein complement(413770..414081) Burkholderia cenocepacia AU 1054 4091499 YP_620256.1 CDS Bcen_0371 NC_008060.1 414114 414473 D PFAM: Secreted repeat of unknown function; KEGG: bur:Bcep18194_A3942 hypothetical protein; hypothetical protein 414114..414473 Burkholderia cenocepacia AU 1054 4091500 YP_620257.1 CDS Bcen_0372 NC_008060.1 414501 415016 D PFAM: sigma-70 region 2; sigma-70 region 4; Sigma-70, region 4 type 2; KEGG: bur:Bcep18194_A3943 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 414501..415016 Burkholderia cenocepacia AU 1054 4091501 YP_620258.1 CDS Bcen_0373 NC_008060.1 415413 415793 D KEGG: bur:Bcep18194_A3944 transmembrane transcriptional regulator (anti-sigma factor); transmembrane anti-sigma factor 415413..415793 Burkholderia cenocepacia AU 1054 4091502 YP_620259.1 CDS Bcen_0374 NC_008060.1 415790 416242 D KEGG: bur:Bcep18194_A3945 hypothetical protein; transmembrane anti-sigma factor 415790..416242 Burkholderia cenocepacia AU 1054 4091503 YP_620260.1 CDS Bcen_0375 NC_008060.1 416281 416871 D KEGG: bur:Bcep18194_A3946 hypothetical protein; hypothetical protein 416281..416871 Burkholderia cenocepacia AU 1054 4091504 YP_620261.1 CDS Bcen_0376 NC_008060.1 416916 417428 D KEGG: bur:Bcep18194_A3947 hypothetical protein; hypothetical protein 416916..417428 Burkholderia cenocepacia AU 1054 4091505 YP_620262.1 CDS groES NC_008060.1 417821 418114 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 417821..418114 Burkholderia cenocepacia AU 1054 4091506 YP_620263.1 CDS groEL NC_008060.1 418161 419801 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 418161..419801 Burkholderia cenocepacia AU 1054 4091507 YP_620264.1 CDS Bcen_0379 NC_008060.1 419948 420814 R PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: bur:Bcep18194_A3959 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase-like; phosphomethylpyrimidine kinase type-1 complement(419948..420814) Burkholderia cenocepacia AU 1054 4091508 YP_620265.1 CDS Bcen_0380 NC_008060.1 421028 421240 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bpm:BURPS1710b_3173 rubredoxin; rubredoxin-type Fe(Cys)4 protein 421028..421240 Burkholderia cenocepacia AU 1054 4091738 YP_620266.1 CDS Bcen_0381 NC_008060.1 421345 422646 D KEGG: bur:Bcep18194_A3961 hypothetical protein; hypothetical protein 421345..422646 Burkholderia cenocepacia AU 1054 4091739 YP_620267.1 CDS Bcen_0382 NC_008060.1 422829 423407 D PFAM: protein of unknown function DUF179; KEGG: bur:Bcep18194_A3962 protein of unknown function DUF179; hypothetical protein 422829..423407 Burkholderia cenocepacia AU 1054 4091740 YP_620268.1 CDS Bcen_0383 NC_008060.1 423404 423853 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 423404..423853 Burkholderia cenocepacia AU 1054 4091741 YP_620269.1 CDS Bcen_0384 NC_008060.1 423840 424364 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 423840..424364 Burkholderia cenocepacia AU 1054 4091742 YP_620270.1 CDS pyrB NC_008060.1 424438 425469 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 424438..425469 Burkholderia cenocepacia AU 1054 4091743 YP_620271.1 CDS Bcen_0386 NC_008060.1 425531 426808 D Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 425531..426808 Burkholderia cenocepacia AU 1054 4091744 YP_620272.1 CDS Bcen_0387 NC_008060.1 426828 427685 D PFAM: phospholipid/glycerol acyltransferase; KEGG: bur:Bcep18194_A3967 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 426828..427685 Burkholderia cenocepacia AU 1054 4091745 YP_620273.1 CDS apaH NC_008060.1 427722 428561 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(427722..428561) Burkholderia cenocepacia AU 1054 4091746 YP_620274.1 CDS Bcen_0389 NC_008060.1 428905 429966 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: bte:BTH_I1469 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 428905..429966 Burkholderia cenocepacia AU 1054 4091747 YP_620275.1 CDS Bcen_0390 NC_008060.1 429978 430871 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bte:BTH_I1470 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 429978..430871 Burkholderia cenocepacia AU 1054 4091748 YP_620276.1 CDS Bcen_0391 NC_008060.1 430856 431407 D KEGG: bur:Bcep18194_A3971 dTDP-4-dehydrorhamnose 3,5-epimerase TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 430856..431407 Burkholderia cenocepacia AU 1054 4091749 YP_620277.1 CDS Bcen_0392 NC_008060.1 431400 432299 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: bur:Bcep18194_A3972 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 431400..432299 Burkholderia cenocepacia AU 1054 4091750 YP_620278.1 CDS Bcen_0393 NC_008060.1 432340 433200 D KEGG: noc:Noc_2177 rhamnosyltransferase; rhamnosyltransferase 432340..433200 Burkholderia cenocepacia AU 1054 4091751 YP_620279.1 CDS Bcen_0394 NC_008060.1 433244 434026 D PFAM: ABC transporter; KEGG: xft:PD1949 ABC transporter permease protein; ABC transporter 433244..434026 Burkholderia cenocepacia AU 1054 4091752 YP_620280.1 CDS Bcen_0395 NC_008060.1 434037 434789 D PFAM: ABC transporter related; SMART: ATPase; KEGG: mpa:MAP0241c ABC transporter ATP-binding component; ABC transporter 434037..434789 Burkholderia cenocepacia AU 1054 4091753 YP_620281.1 CDS Bcen_0396 NC_008060.1 434832 436709 D PFAM: glycosyl transferase, family 2; KEGG: pst:PSPTO1074 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 434832..436709 Burkholderia cenocepacia AU 1054 4091754 YP_620282.1 CDS Bcen_0397 NC_008060.1 436808 437977 D KEGG: bpm:BURPS1710b_3304 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 436808..437977 Burkholderia cenocepacia AU 1054 4091755 YP_620283.1 CDS Bcen_0398 NC_008060.1 438008 439267 D PFAM: transposase, mutator type; KEGG: bte:BTH_II0431 transposase, mutator family; transposase, mutator type 438008..439267 Burkholderia cenocepacia AU 1054 4091756 YP_620284.1 CDS Bcen_0399 NC_008060.1 439359 439613 D PFAM: mannose-6-phosphate isomerase, type II; KEGG: bte:BTH_II0542 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-6-phosphate isomerase, type II 439359..439613 Burkholderia cenocepacia AU 1054 4091084 YP_620285.1 CDS Bcen_0400 NC_008060.1 439640 440758 D TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: bte:BTH_I1331 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 439640..440758 Burkholderia cenocepacia AU 1054 4091085 YP_620286.1 CDS Bcen_0401 NC_008060.1 440763 441653 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: bte:BTH_I1332 GDP-6-deoxy-D-lyxo-4-hexulose reductase; NAD-dependent epimerase/dehydratase 440763..441653 Burkholderia cenocepacia AU 1054 4091086 YP_620287.1 CDS Bcen_0402 NC_008060.1 441794 446728 D TIGRFAM: Methyltransferase FkbM; PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: pst:PSPTO1074 glycosyl transferase, group 2 family protein; methyltransferase FkbM 441794..446728 Burkholderia cenocepacia AU 1054 4091087 YP_620288.1 CDS Bcen_0403 NC_008060.1 446873 447121 D hypothetical protein 446873..447121 Burkholderia cenocepacia AU 1054 4091088 YP_620289.1 CDS Bcen_0404 NC_008060.1 447388 447666 D hypothetical protein 447388..447666 Burkholderia cenocepacia AU 1054 4091089 YP_620290.1 CDS Bcen_0405 NC_008060.1 447677 448483 D PFAM: glycosyl transferase, family 2; KEGG: bur:Bcep18194_A3981 glycosyl transferase, family 2; glycosyl transferase family protein 447677..448483 Burkholderia cenocepacia AU 1054 4091090 YP_620291.1 CDS Bcen_0406 NC_008060.1 448480 449445 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: bur:Bcep18194_A3982 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 448480..449445 Burkholderia cenocepacia AU 1054 4091091 YP_620292.1 CDS Bcen_0407 NC_008060.1 449453 450469 D PFAM: glycosyl transferase, family 4; KEGG: bur:Bcep18194_A3983 glycosyl transferase, family 4; glycosyl transferase family protein 449453..450469 Burkholderia cenocepacia AU 1054 4091092 YP_620293.1 CDS Bcen_0408 NC_008060.1 450482 452365 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: bur:Bcep18194_A3984 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 450482..452365 Burkholderia cenocepacia AU 1054 4091093 YP_620294.1 CDS Bcen_0409 NC_008060.1 452453 453559 R PFAM: glycosyl transferase, family 4; KEGG: bur:Bcep18194_A3985 glycosyl transferase, family 4; glycosyl transferase family protein complement(452453..453559) Burkholderia cenocepacia AU 1054 4091094 YP_620295.1 CDS Bcen_0410 NC_008060.1 453587 454609 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: bur:Bcep18194_A3986 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(453587..454609) Burkholderia cenocepacia AU 1054 4091095 YP_620296.1 CDS Bcen_0411 NC_008060.1 454625 455761 R PFAM: glycosyl transferase, group 1; KEGG: bur:Bcep18194_A3987 glycosyl transferase, group 1; group 1 glycosyl transferase complement(454625..455761) Burkholderia cenocepacia AU 1054 4091096 YP_620297.1 CDS Bcen_0412 NC_008060.1 455814 456638 R PFAM: glycosyl transferase, family 2; KEGG: bur:Bcep18194_A3988 glycosyl transferase, family 2; glycosyl transferase family protein complement(455814..456638) Burkholderia cenocepacia AU 1054 4091097 YP_620298.1 CDS Bcen_0413 NC_008060.1 456635 457891 R KEGG: bur:Bcep18194_A3989 membrane protein; membrane protein complement(456635..457891) Burkholderia cenocepacia AU 1054 4091098 YP_620299.1 CDS Bcen_0414 NC_008060.1 458062 459531 D PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: bur:Bcep18194_A3990 phosphomannomutase; phosphomannomutase 458062..459531 Burkholderia cenocepacia AU 1054 4091099 YP_620300.1 CDS Bcen_0415 NC_008060.1 459626 460699 D TIGRFAM: Lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase, family 9; KEGG: bur:Bcep18194_A4000 lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase I 459626..460699 Burkholderia cenocepacia AU 1054 4091100 YP_620301.1 CDS Bcen_0416 NC_008060.1 460723 461607 D KEGG: bur:Bcep18194_A4001 hypothetical protein; hypothetical protein 460723..461607 Burkholderia cenocepacia AU 1054 4091101 YP_620302.1 CDS Bcen_0417 NC_008060.1 461645 463006 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 461645..463006 Burkholderia cenocepacia AU 1054 4091102 YP_620303.1 CDS Bcen_0418 NC_008060.1 463070 463717 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: bur:Bcep18194_A4003 urease accessory protein UreG; urease accessory protein UreG complement(463070..463717) Burkholderia cenocepacia AU 1054 4091103 YP_620304.1 CDS Bcen_0419 NC_008060.1 463734 464414 R PFAM: Urease accessory protein UreF; KEGG: bur:Bcep18194_A4004 urease accessory protein UreF; urease accessory protein UreF complement(463734..464414) Burkholderia cenocepacia AU 1054 4090988 YP_620305.1 CDS ureE NC_008060.1 464401 465015 R involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE complement(464401..465015) Burkholderia cenocepacia AU 1054 4090989 YP_620306.1 CDS ureC NC_008060.1 465034 466740 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(465034..466740) Burkholderia cenocepacia AU 1054 4090990 YP_620307.1 CDS ureB NC_008060.1 466769 467074 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta complement(466769..467074) Burkholderia cenocepacia AU 1054 4090991 YP_620308.1 CDS ureA NC_008060.1 467083 467385 R UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma complement(467083..467385) Burkholderia cenocepacia AU 1054 4090992 YP_620309.1 CDS Bcen_0424 NC_008060.1 467622 468497 R PFAM: Urease accessory protein UreD; KEGG: bur:Bcep18194_A4009 urease accessory protein UreD; urease accessory protein UreD complement(467622..468497) Burkholderia cenocepacia AU 1054 4090993 YP_620310.1 CDS Bcen_0425 NC_008060.1 468706 469698 R KEGG: xcb:XC_1037 hypothetical protein; hypothetical protein complement(468706..469698) Burkholderia cenocepacia AU 1054 4090994 YP_620311.1 CDS Bcen_0426 NC_008060.1 469698 470429 R KEGG: rso:RS05227 hypothetical protein; hypothetical protein complement(469698..470429) Burkholderia cenocepacia AU 1054 4090995 YP_620312.1 CDS Bcen_0427 NC_008060.1 470699 471391 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4010 ABC branched-chain amino acid family transporter, ATPase subunit; ABC transporter complement(470699..471391) Burkholderia cenocepacia AU 1054 4090996 YP_620313.1 CDS Bcen_0428 NC_008060.1 471396 472253 R PFAM: ABC transporter related; KEGG: bur:Bcep18194_A4011 ABC transporter, ATPase subunit; ABC transporter complement(471396..472253) Burkholderia cenocepacia AU 1054 4090997 YP_620314.1 CDS Bcen_0429 NC_008060.1 472250 473437 R PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4012 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(472250..473437) Burkholderia cenocepacia AU 1054 4090998 YP_620315.1 CDS Bcen_0430 NC_008060.1 473439 475058 R PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4013 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(473439..475058) Burkholderia cenocepacia AU 1054 4090999 YP_620316.1 CDS Bcen_0431 NC_008060.1 475207 476514 R TIGRFAM: Twin-arginine translocation pathway signal; KEGG: bur:Bcep18194_A4014 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; twin-arginine translocation pathway signal complement(475207..476514) Burkholderia cenocepacia AU 1054 4091000 YP_620317.1 CDS Bcen_0432 NC_008060.1 476861 477184 R PFAM: Rhodanese-like; KEGG: bur:Bcep18194_A4015 rhodanese-related sulfurtransferase; rhodanese-like protein complement(476861..477184) Burkholderia cenocepacia AU 1054 4091001 YP_620318.1 CDS Bcen_0433 NC_008060.1 477199 477855 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; Methyltransferase type 11; KEGG: bur:Bcep18194_A4016 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(477199..477855) Burkholderia cenocepacia AU 1054 4091002 YP_620319.1 CDS Bcen_0434 NC_008060.1 477960 478217 R KEGG: bur:Bcep18194_A4017 hypothetical protein; hypothetical protein complement(477960..478217) Burkholderia cenocepacia AU 1054 4091003 YP_620320.1 CDS Bcen_0435 NC_008060.1 478313 479704 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(478313..479704) Burkholderia cenocepacia AU 1054 4091004 YP_620321.1 CDS Bcen_0436 NC_008060.1 479878 480195 D PFAM: protein of unknown function UPF0153; KEGG: bur:Bcep18194_A4019 protein of unknown function UPF0153; hypothetical protein 479878..480195 Burkholderia cenocepacia AU 1054 4091005 YP_620322.1 CDS Bcen_0437 NC_008060.1 480192 480773 D KEGG: bur:Bcep18194_A4020 hypothetical protein; hypothetical protein 480192..480773 Burkholderia cenocepacia AU 1054 4091006 YP_620323.1 CDS Bcen_0438 NC_008060.1 480853 481683 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 480853..481683 Burkholderia cenocepacia AU 1054 4090930 YP_620324.1 CDS trmB NC_008060.1 481781 482548 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(481781..482548) Burkholderia cenocepacia AU 1054 4090931 YP_620325.1 CDS Bcen_0440 NC_008060.1 482937 483449 R hypothetical protein complement(482937..483449) Burkholderia cenocepacia AU 1054 4090933 YP_620326.1 CDS Bcen_0441 NC_008060.1 484198 485142 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: psb:Psyr_1555 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(484198..485142) Burkholderia cenocepacia AU 1054 4090934 YP_620327.1 CDS Bcen_0442 NC_008060.1 485382 485657 R KEGG: cvi:CV1213 hypothetical protein; hypothetical protein complement(485382..485657) Burkholderia cenocepacia AU 1054 4090935 YP_620328.1 CDS Bcen_0443 NC_008060.1 485958 486437 D hypothetical protein 485958..486437 Burkholderia cenocepacia AU 1054 4090936 YP_620329.1 CDS Bcen_0444 NC_008060.1 486491 486841 D hypothetical protein 486491..486841 Burkholderia cenocepacia AU 1054 4090937 YP_620330.1 CDS Bcen_0445 NC_008060.1 486873 487199 D hypothetical protein 486873..487199 Burkholderia cenocepacia AU 1054 4090938 YP_620331.1 CDS Bcen_0446 NC_008060.1 487422 488279 D hypothetical protein 487422..488279 Burkholderia cenocepacia AU 1054 4090939 YP_620332.1 CDS Bcen_0447 NC_008060.1 488307 489452 R PFAM: phage integrase; KEGG: vvy:VV1777 integrase; phage integrase complement(488307..489452) Burkholderia cenocepacia AU 1054 4090940 YP_620333.1 CDS Bcen_0448 NC_008060.1 489580 491820 R TIGRFAM: Phage-plasmid primase P4-like; PFAM: Poxvirus D5 protein; KEGG: bld:BLi03629 hypothetical protein; Phage-plasmid primase P4-like complement(489580..491820) Burkholderia cenocepacia AU 1054 4090941 YP_620334.1 CDS Bcen_0449 NC_008060.1 491902 492144 R hypothetical protein complement(491902..492144) Burkholderia cenocepacia AU 1054 4090942 YP_620335.1 CDS Bcen_0450 NC_008060.1 493548 493856 D hypothetical protein 493548..493856 Burkholderia cenocepacia AU 1054 4090943 YP_620336.1 CDS Bcen_0451 NC_008060.1 493917 494219 R hypothetical protein complement(493917..494219) Burkholderia cenocepacia AU 1054 4090944 YP_620337.1 CDS Bcen_0452 NC_008060.1 494290 495012 R KEGG: det:DET0639 hypothetical protein; hypothetical protein complement(494290..495012) Burkholderia cenocepacia AU 1054 4090945 YP_620338.1 CDS Bcen_0453 NC_008060.1 496022 496366 D PFAM: protein of unknown function DUF861, cupin_3; KEGG: bur:Bcep18194_A4028 protein of unknown function DUF861; hypothetical protein 496022..496366 Burkholderia cenocepacia AU 1054 4090946 YP_620339.1 CDS Bcen_0454 NC_008060.1 496703 497869 D KEGG: bur:Bcep18194_A4034 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing enzyme 496703..497869 Burkholderia cenocepacia AU 1054 4090947 YP_620340.1 CDS Bcen_0455 NC_008060.1 497873 498499 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_A4035 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA complement(497873..498499) Burkholderia cenocepacia AU 1054 4090948 YP_620341.1 CDS Bcen_0456 NC_008060.1 498577 499497 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4037 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(498577..499497) Burkholderia cenocepacia AU 1054 4092759 YP_620342.1 CDS Bcen_0457 NC_008060.1 499690 501012 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4038 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 499690..501012 Burkholderia cenocepacia AU 1054 4092760 YP_620343.1 CDS Bcen_0458 NC_008060.1 501009 502298 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A4039 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 501009..502298 Burkholderia cenocepacia AU 1054 4092761 YP_620344.1 CDS Bcen_0459 NC_008060.1 502295 503104 D catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA; methylmalonyl-CoA decarboxylase 502295..503104 Burkholderia cenocepacia AU 1054 4092762 YP_620345.1 CDS Bcen_0460 NC_008060.1 503145 503687 R PFAM: Chromate transporter; KEGG: bur:Bcep18194_A4041 chromate transporter; chromate transporter complement(503145..503687) Burkholderia cenocepacia AU 1054 4092763 YP_620346.1 CDS Bcen_0461 NC_008060.1 503684 504295 R PFAM: Chromate transporter; KEGG: bur:Bcep18194_A4042 chromate transporter; chromate transporter complement(503684..504295) Burkholderia cenocepacia AU 1054 4092764 YP_620347.1 CDS Bcen_0462 NC_008060.1 504427 505182 R PFAM: regulatory protein GntR, HTH; regulatory protein, DeoR; Helix-turn-helix, type 11; KEGG: bur:Bcep18194_A4043 transcriptional regulator, DeoR family; DeoR family transcriptional regulator complement(504427..505182) Burkholderia cenocepacia AU 1054 4092765 YP_620348.1 CDS Bcen_0463 NC_008060.1 505264 505863 D TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4044 nucleoside diphosphate pyrophosphatase; nucleoside diphosphate pyrophosphatase 505264..505863 Burkholderia cenocepacia AU 1054 4092766 YP_620349.1 CDS Bcen_0464 NC_008060.1 505860 506237 D KEGG: bur:Bcep18194_A4045 hypothetical protein; hypothetical protein 505860..506237 Burkholderia cenocepacia AU 1054 4092767 YP_620350.1 CDS Bcen_0465 NC_008060.1 506428 507297 D PFAM: Silent information regulator protein Sir2; KEGG: bur:Bcep18194_A4046 NAD-dependent protein deacetylases SIR2 family; silent information regulator protein Sir2 506428..507297 Burkholderia cenocepacia AU 1054 4092768 YP_620351.1 CDS Bcen_0466 NC_008060.1 507335 508546 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: bpm:BURPS1710b_3113 family S53 non-peptidase homologue; peptidase S8/S53 subtilisin kexin sedolisin complement(507335..508546) Burkholderia cenocepacia AU 1054 4092769 YP_620352.1 CDS Bcen_0467 NC_008060.1 508961 509347 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 508961..509347 Burkholderia cenocepacia AU 1054 4092770 YP_620353.1 CDS Bcen_0468 NC_008060.1 509372 509722 D PFAM: protein of unknown function DUF190; KEGG: bur:Bcep18194_A4048 protein of unknown function DUF190; hypothetical protein 509372..509722 Burkholderia cenocepacia AU 1054 4092771 YP_620354.1 CDS Bcen_0469 NC_008060.1 509736 510299 R PFAM: protein of unknown function YGGT; KEGG: bur:Bcep18194_A4049 protein of unknown function YGGT; hypothetical protein complement(509736..510299) Burkholderia cenocepacia AU 1054 4092772 YP_620355.1 CDS Bcen_0470 NC_008060.1 510375 511304 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A4050 hypothetical protein; NADP oxidoreductase, coenzyme F420-dependent complement(510375..511304) Burkholderia cenocepacia AU 1054 4092773 YP_620356.1 CDS Bcen_0471 NC_008060.1 511739 512131 D KEGG: bur:Bcep18194_A4051 hypothetical protein; hypothetical protein 511739..512131 Burkholderia cenocepacia AU 1054 4092774 YP_620357.1 CDS Bcen_0472 NC_008060.1 512234 512947 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_A4052 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA complement(512234..512947) Burkholderia cenocepacia AU 1054 4092775 YP_620358.1 CDS Bcen_0473 NC_008060.1 512962 514617 R PFAM: Carboxylyase-related protein; KEGG: bur:Bcep18194_A4053 carboxylyase-related protein; carboxylyase-like protein complement(512962..514617) Burkholderia cenocepacia AU 1054 4092776 YP_620359.1 CDS Bcen_0474 NC_008060.1 515115 516251 D PFAM: Lytic transglycosylase, catalytic; KEGG: bur:Bcep18194_A4054 lytic transglycosylase, catalytic; lytic transglycosylase, catalytic 515115..516251 Burkholderia cenocepacia AU 1054 4092777 YP_620360.1 CDS Bcen_0475 NC_008060.1 516366 517562 R PFAM: aminotransferase, class I and II; KEGG: bur:Bcep18194_A4055 aminotransferase, class I and II; aminotransferase complement(516366..517562) Burkholderia cenocepacia AU 1054 4092624 YP_620361.1 CDS nusB NC_008060.1 517633 518070 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(517633..518070) Burkholderia cenocepacia AU 1054 4092625 YP_620362.1 CDS ribH NC_008060.1 518067 518582 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(518067..518582) Burkholderia cenocepacia AU 1054 4092626 YP_620363.1 CDS Bcen_0478 NC_008060.1 518636 519778 R bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein complement(518636..519778) Burkholderia cenocepacia AU 1054 4092627 YP_620364.1 CDS Bcen_0479 NC_008060.1 519938 520456 R KEGG: bur:Bcep18194_A4059 hypothetical protein; hypothetical protein complement(519938..520456) Burkholderia cenocepacia AU 1054 4092628 YP_620365.1 CDS Bcen_0480 NC_008060.1 520822 521451 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(520822..521451) Burkholderia cenocepacia AU 1054 4092629 YP_620366.1 CDS Bcen_0481 NC_008060.1 521466 522587 R KEGG: bur:Bcep18194_A4064 riboflavin biosynthesis protein RibD/riboflavin-specific deaminase TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase-like; riboflavin biosynthesis protein RibD complement(521466..522587) Burkholderia cenocepacia AU 1054 4092630 YP_620367.1 CDS Bcen_0482 NC_008060.1 522603 523886 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(522603..523886) Burkholderia cenocepacia AU 1054 4092631 YP_620368.1 CDS Bcen_0483 NC_008060.1 524068 524520 R KEGG: bur:Bcep18194_A4066 hypothetical protein; hypothetical protein complement(524068..524520) Burkholderia cenocepacia AU 1054 4092632 YP_620369.1 CDS Bcen_0484 NC_008060.1 524581 525120 R KEGG: bpm:BURPS1710b_3097 membrane protein; hypothetical protein complement(524581..525120) Burkholderia cenocepacia AU 1054 4092633 YP_620370.1 CDS Bcen_0485 NC_008060.1 525120 526496 D TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4067 drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 525120..526496 Burkholderia cenocepacia AU 1054 4092634 YP_620371.1 CDS Bcen_0486 NC_008060.1 526601 528529 R glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; bifunctional glucokinase/RpiR family transcriptional regulator complement(526601..528529) Burkholderia cenocepacia AU 1054 4092635 YP_620372.1 CDS Bcen_0487 NC_008060.1 528507 529187 R TIGRFAM: 6-phosphogluconolactonase; KEGG: bur:Bcep18194_A4069 6-phosphogluconolactonase; 6-phosphogluconolactonase complement(528507..529187) Burkholderia cenocepacia AU 1054 4092636 YP_620373.1 CDS Bcen_0488 NC_008060.1 529276 530745 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(529276..530745) Burkholderia cenocepacia AU 1054 4092637 YP_620374.1 CDS Bcen_0489 NC_008060.1 531176 532423 D PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_A4071 ABC sugar transporter, periplasmic ligand binding protein; extracellular solute-binding protein 531176..532423 Burkholderia cenocepacia AU 1054 4092638 YP_620375.1 CDS Bcen_0490 NC_008060.1 532562 533500 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4072 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 532562..533500 Burkholderia cenocepacia AU 1054 4092639 YP_620376.1 CDS Bcen_0491 NC_008060.1 533490 534347 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4073 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 533490..534347 Burkholderia cenocepacia AU 1054 4092640 YP_620377.1 CDS Bcen_0492 NC_008060.1 534460 535578 D PFAM: ABC transporter related; TOBE; Transport-associated OB; SMART: ATPase; KEGG: bur:Bcep18194_A4074 ABC sugar transporter, ATPase subunit; ABC transporter 534460..535578 Burkholderia cenocepacia AU 1054 4092641 YP_620378.1 CDS Bcen_0493 NC_008060.1 535676 536299 R PFAM: protein of unknown function UPF0126; KEGG: bur:Bcep18194_A4075 protein of unknown function UPF0126; hypothetical protein complement(535676..536299) Burkholderia cenocepacia AU 1054 4092642 YP_620379.1 CDS Bcen_0494 NC_008060.1 536286 537065 R PFAM: Smr protein/MutS2; KEGG: bur:Bcep18194_A4076 Smr protein/MutS2-like; Smr protein/MutS2 complement(536286..537065) Burkholderia cenocepacia AU 1054 4092643 YP_620380.1 CDS Bcen_0495 NC_008060.1 537201 538163 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A4077 thioredoxin reductase; thioredoxin reductase complement(537201..538163) Burkholderia cenocepacia AU 1054 4092271 YP_620381.1 CDS Bcen_0496 NC_008060.1 538551 540860 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: bur:Bcep18194_A4078 cell division FtsK/SpoIIIE; cell division protein FtsK 538551..540860 Burkholderia cenocepacia AU 1054 4092272 YP_620382.1 CDS lolA NC_008060.1 540907 541596 D participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 540907..541596 Burkholderia cenocepacia AU 1054 4092273 YP_620383.1 CDS Bcen_0498 NC_008060.1 541816 543126 D PFAM: ATPase AAA; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: bur:Bcep18194_A4080 AAA ATPase; recombination factor protein RarA 541816..543126 Burkholderia cenocepacia AU 1054 4092274 YP_620384.1 CDS Bcen_0499 NC_008060.1 543170 543439 R KEGG: bur:Bcep18194_A4081 hypothetical protein; hypothetical protein complement(543170..543439) Burkholderia cenocepacia AU 1054 4092275 YP_620385.2 CDS Bcen_0500 NC_008060.1 543689 544990 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 543689..544990 Burkholderia cenocepacia AU 1054 4092276 YP_620386.1 CDS Bcen_0501 NC_008060.1 545463 546617 R PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_A4085 alkane-1 monooxygenase; alkane-1 monooxygenase complement(545463..546617) Burkholderia cenocepacia AU 1054 4092278 YP_620387.1 CDS Bcen_0502 NC_008060.1 546842 547216 D hypothetical protein 546842..547216 Burkholderia cenocepacia AU 1054 4092279 YP_620388.1 CDS Bcen_0503 NC_008060.1 547290 547802 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4086 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 547290..547802 Burkholderia cenocepacia AU 1054 4092280 YP_620389.1 CDS Bcen_0504 NC_008060.1 547973 548758 D blocks the formation of polar Z-ring septums; septum formation inhibitor 547973..548758 Burkholderia cenocepacia AU 1054 4092281 YP_620390.1 CDS Bcen_0505 NC_008060.1 548818 549633 D TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bur:Bcep18194_A4088 septum site-determining protein MinD; septum site-determining protein MinD 548818..549633 Burkholderia cenocepacia AU 1054 4092282 YP_620391.1 CDS Bcen_0506 NC_008060.1 549646 549900 D works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 549646..549900 Burkholderia cenocepacia AU 1054 4092283 YP_620392.1 CDS Bcen_0507 NC_008060.1 550062 550463 D KEGG: bur:Bcep18194_A4090 hypothetical protein; hypothetical protein 550062..550463 Burkholderia cenocepacia AU 1054 4092284 YP_620393.1 CDS Bcen_0508 NC_008060.1 550476 550586 D KEGG: bpm:BURPS1710b_3063 hypothetical protein; hypothetical protein 550476..550586 Burkholderia cenocepacia AU 1054 4092285 YP_620394.1 CDS Bcen_0509 NC_008060.1 550580 552136 R PFAM: Cl- channel, voltage gated; KEGG: bur:Bcep18194_A4091 Cl-channel, voltage gated; voltage gated Cl- channel protein complement(550580..552136) Burkholderia cenocepacia AU 1054 4092286 YP_620395.1 CDS Bcen_0510 NC_008060.1 552327 553325 D TIGRFAM: Lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase, family 9; KEGG: bur:Bcep18194_A4092 lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase I 552327..553325 Burkholderia cenocepacia AU 1054 4092287 YP_620396.1 CDS Bcen_0511 NC_008060.1 553345 553590 R KEGG: bur:Bcep18194_A4093 hypothetical protein; hypothetical protein complement(553345..553590) Burkholderia cenocepacia AU 1054 4092288 YP_620397.1 CDS Bcen_0512 NC_008060.1 553627 555078 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4094 major facilitator superfamily (MFS_1) transporter; general substrate transporter complement(553627..555078) Burkholderia cenocepacia AU 1054 4093546 YP_620398.1 CDS Bcen_0513 NC_008060.1 555246 555737 R TIGRFAM: TonB-like; KEGG: bur:Bcep18194_A4095 TonB-like protein; TonB-like complement(555246..555737) Burkholderia cenocepacia AU 1054 4093547 YP_620399.1 CDS Bcen_0514 NC_008060.1 556051 556344 R KEGG: bur:Bcep18194_A4097 hypothetical protein; hypothetical protein complement(556051..556344) Burkholderia cenocepacia AU 1054 4093548 YP_620400.1 CDS Bcen_0515 NC_008060.1 556721 557113 R KEGG: bur:Bcep18194_A4098 hypothetical protein; hypothetical protein complement(556721..557113) Burkholderia cenocepacia AU 1054 4093549 YP_620401.1 CDS Bcen_0516 NC_008060.1 557387 558601 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(557387..558601) Burkholderia cenocepacia AU 1054 4093551 YP_620402.1 CDS Bcen_0517 NC_008060.1 558636 559262 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(558636..559262) Burkholderia cenocepacia AU 1054 4093552 YP_620403.1 CDS rph NC_008060.1 559255 559995 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(559255..559995) Burkholderia cenocepacia AU 1054 4093553 YP_620404.1 CDS Bcen_0519 NC_008060.1 560109 561092 D TIGRFAM: conserved hypothetical protein; PFAM: YicC-like-like; Domain of unknown function DUF1732; KEGG: bur:Bcep18194_A4106 hypothetical protein; hypothetical protein 560109..561092 Burkholderia cenocepacia AU 1054 4093554 YP_620405.1 CDS gmk NC_008060.1 561100 561783 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 561100..561783 Burkholderia cenocepacia AU 1054 4093555 YP_620406.1 CDS Bcen_0521 NC_008060.1 561842 562045 D Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 561842..562045 Burkholderia cenocepacia AU 1054 4093556 YP_620407.1 CDS Bcen_0522 NC_008060.1 562109 564475 D KEGG: bur:Bcep18194_A4109 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT; TGS; metal-dependent phosphohydrolase, HD subdomain; RelA/SpoT; SMART: Metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 562109..564475 Burkholderia cenocepacia AU 1054 4093557 YP_620408.1 CDS greB NC_008060.1 565153 565716 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 565153..565716 Burkholderia cenocepacia AU 1054 4093146 YP_620409.1 CDS Bcen_0524 NC_008060.1 565810 566934 R PFAM: porin, Gram-negative type; KEGG: bte:BTH_I1592 outer membrane porin OpcP; porin complement(565810..566934) Burkholderia cenocepacia AU 1054 4093147 YP_620410.1 CDS Bcen_0525 NC_008060.1 567464 567730 R KEGG: bur:Bcep18194_A4112 hypothetical protein; hypothetical protein complement(567464..567730) Burkholderia cenocepacia AU 1054 4093148 YP_620411.1 CDS Bcen_0527 NC_008060.1 568123 568326 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: bur:Bcep18194_A4113 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 568123..568326 Burkholderia cenocepacia AU 1054 4093150 YP_620412.1 CDS Bcen_0528 NC_008060.1 568468 569595 D KEGG: bur:Bcep18194_A4114 DNA polymerase III, epsilon subunit TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Excinuclease ABC, C subunit-like; Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 568468..569595 Burkholderia cenocepacia AU 1054 4093151 YP_620413.1 CDS Bcen_0529 NC_008060.1 569629 570222 R catalyzes the interconversion of chorismate to prephenate; chorismate mutase complement(569629..570222) Burkholderia cenocepacia AU 1054 4093152 YP_620414.1 CDS Bcen_0530 NC_008060.1 570446 570592 R KEGG: bur:Bcep18194_A4116 hypothetical protein; hypothetical protein complement(570446..570592) Burkholderia cenocepacia AU 1054 4093153 YP_620415.1 CDS Bcen_0531 NC_008060.1 570712 571179 D KEGG: bur:Bcep18194_A4117 hypothetical protein; hypothetical protein 570712..571179 Burkholderia cenocepacia AU 1054 4093154 YP_620416.1 CDS Bcen_0532 NC_008060.1 571308 573680 D KEGG: bur:Bcep18194_A4120 hypothetical protein; hypothetical protein 571308..573680 Burkholderia cenocepacia AU 1054 4093155 YP_620417.1 CDS Bcen_0533 NC_008060.1 573910 574164 R PFAM: Transglycosylase-associated protein; KEGG: bur:Bcep18194_A4121 transglycosylase; transglycosylase complement(573910..574164) Burkholderia cenocepacia AU 1054 4093156 YP_620418.1 CDS Bcen_0534 NC_008060.1 574293 574763 R hypothetical protein complement(574293..574763) Burkholderia cenocepacia AU 1054 4093157 YP_620419.1 CDS Bcen_0535 NC_008060.1 575068 576081 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(575068..576081) Burkholderia cenocepacia AU 1054 4093159 YP_620420.1 CDS pepN NC_008060.1 576364 579057 R TIGRFAM: Peptidase M1, alanyl aminopeptidase; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: bur:Bcep18194_A4126 peptidase M, neutral zinc metallopeptidases, zinc-binding site; aminopeptidase N complement(576364..579057) Burkholderia cenocepacia AU 1054 4093160 YP_620421.1 CDS Bcen_0537 NC_008060.1 579245 579955 D KEGG: bur:Bcep18194_A4127 hypothetical protein; hypothetical protein 579245..579955 Burkholderia cenocepacia AU 1054 4093161 YP_620422.1 CDS Bcen_0538 NC_008060.1 580010 580582 R PFAM: protein of unknown function UPF0016; KEGG: bur:Bcep18194_A4128 protein of unknown function UPF0016; hypothetical protein complement(580010..580582) Burkholderia cenocepacia AU 1054 4093162 YP_620423.1 CDS Bcen_0539 NC_008060.1 580946 582265 R Catalyzes the deamination of guanine; guanine deaminase complement(580946..582265) Burkholderia cenocepacia AU 1054 4091757 YP_620424.1 CDS Bcen_0540 NC_008060.1 582262 582624 R KEGG: bur:Bcep18194_A4130 hypothetical protein; hypothetical protein complement(582262..582624) Burkholderia cenocepacia AU 1054 4091758 YP_620425.1 CDS Bcen_0541 NC_008060.1 582651 584699 R KEGG: bur:Bcep18194_A4131 adenosine deaminase TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; protein of unknown function DUF182; adenosine deaminase complement(582651..584699) Burkholderia cenocepacia AU 1054 4091759 YP_620426.1 CDS Bcen_0542 NC_008060.1 585322 585834 R disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B complement(585322..585834) Burkholderia cenocepacia AU 1054 4091760 YP_620427.1 CDS Bcen_0543 NC_008060.1 585983 587359 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(585983..587359) Burkholderia cenocepacia AU 1054 4091761 YP_620428.1 CDS Bcen_0544 NC_008060.1 587366 588046 R PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: bur:Bcep18194_A4135 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(587366..588046) Burkholderia cenocepacia AU 1054 4091762 YP_620429.1 CDS Bcen_0545 NC_008060.1 588327 589517 D PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: bte:BTH_I1617 glutamine amidotransferase, class I; peptidase C26 588327..589517 Burkholderia cenocepacia AU 1054 4091763 YP_620430.1 CDS Bcen_0546 NC_008060.1 589633 590331 D KEGG: bur:Bcep18194_A4138 hypothetical protein; hypothetical protein 589633..590331 Burkholderia cenocepacia AU 1054 4091764 YP_620431.1 CDS Bcen_0547 NC_008060.1 590410 591444 R KEGG: bur:Bcep18194_A4139 hypothetical protein; hypothetical protein complement(590410..591444) Burkholderia cenocepacia AU 1054 4091765 YP_620432.1 CDS Bcen_0548 NC_008060.1 591570 593036 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4140 major facilitator superfamily (MFS_1) transporter; general substrate transporter 591570..593036 Burkholderia cenocepacia AU 1054 4091766 YP_620433.1 CDS Bcen_0549 NC_008060.1 593117 595024 R PFAM: TPR repeat; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: bur:Bcep18194_A4141 TPR repeat protein; hypothetical protein complement(593117..595024) Burkholderia cenocepacia AU 1054 4091767 YP_620434.1 CDS Bcen_0550 NC_008060.1 595083 596729 D PFAM: monooxygenase, FAD-binding; KEGG: bur:Bcep18194_A4142 monooxygenase, FAD-binding; FAD-binding monooxygenase 595083..596729 Burkholderia cenocepacia AU 1054 4091768 YP_620435.1 CDS Bcen_0551 NC_008060.1 596742 596993 R KEGG: bur:Bcep18194_A4143 hypothetical protein; hypothetical protein complement(596742..596993) Burkholderia cenocepacia AU 1054 4091769 YP_620436.1 CDS Bcen_0552 NC_008060.1 597001 599952 R TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: bur:Bcep18194_A4144 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha complement(597001..599952) Burkholderia cenocepacia AU 1054 4091770 YP_620437.1 CDS Bcen_0553 NC_008060.1 599970 601547 R PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: bur:Bcep18194_A4145 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) complement(599970..601547) Burkholderia cenocepacia AU 1054 4091771 YP_620438.1 CDS Bcen_0554 NC_008060.1 601544 602044 R KEGG: bur:Bcep18194_A4146 NADH-ubiquinone oxidoreductase 24 kD subunit-like; NADH-ubiquinone oxidoreductase 24 kD subunit-like protein complement(601544..602044) Burkholderia cenocepacia AU 1054 4091772 YP_620439.1 CDS Bcen_0555 NC_008060.1 602175 603281 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_A4147 transcriptional regulator of molybdate metabolism, LysR family; molybdate metabolism transcriptional regulator 602175..603281 Burkholderia cenocepacia AU 1054 4091773 YP_620440.1 CDS Bcen_0556 NC_008060.1 603383 603652 D KEGG: bur:Bcep18194_A4148 hypothetical protein; hypothetical protein 603383..603652 Burkholderia cenocepacia AU 1054 4091774 YP_620441.1 CDS Bcen_0557 NC_008060.1 604009 604362 D KEGG: bur:Bcep18194_A4149 hypothetical protein; hypothetical protein 604009..604362 Burkholderia cenocepacia AU 1054 4091775 YP_620442.1 CDS Bcen_0558 NC_008060.1 605039 605752 R KEGG: bur:Bcep18194_A4150 2-phosphoglycolate phosphatase TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase complement(605039..605752) Burkholderia cenocepacia AU 1054 4093789 YP_620443.1 CDS Bcen_0559 NC_008060.1 605766 606464 R Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase complement(605766..606464) Burkholderia cenocepacia AU 1054 4093790 YP_620444.1 CDS Bcen_0560 NC_008060.1 606617 607285 R PFAM: OmpA/MotB; KEGG: bur:Bcep18194_A4152 outer membrane protein, OmpA/MotB family; OmpA/MotB complement(606617..607285) Burkholderia cenocepacia AU 1054 4093791 YP_620445.1 CDS Bcen_0561 NC_008060.1 607811 610414 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 607811..610414 Burkholderia cenocepacia AU 1054 4093792 YP_620446.1 CDS Bcen_0562 NC_008060.1 610498 611097 D KEGG: bur:Bcep18194_A4154 hypothetical protein; hypothetical protein 610498..611097 Burkholderia cenocepacia AU 1054 4093793 YP_620447.1 CDS Bcen_0563 NC_008060.1 611253 612335 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 611253..612335 Burkholderia cenocepacia AU 1054 4093794 YP_620448.1 CDS Bcen_0564 NC_008060.1 612369 613457 D TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT; KEGG: bur:Bcep18194_A4156 chorismate mutase/prephenate dehydratase; chorismate mutase 612369..613457 Burkholderia cenocepacia AU 1054 4093795 YP_620449.1 CDS Bcen_0565 NC_008060.1 613582 614571 D PFAM: Prephenate dehydrogenase; KEGG: bur:Bcep18194_A4157 prephenate dehydrogenase; prephenate dehydrogenase 613582..614571 Burkholderia cenocepacia AU 1054 4093796 YP_620450.1 CDS Bcen_0566 NC_008060.1 614585 615889 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 614585..615889 Burkholderia cenocepacia AU 1054 4093797 YP_620451.1 CDS cmk NC_008060.1 615903 616589 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 615903..616589 Burkholderia cenocepacia AU 1054 4093798 YP_620452.2 CDS rpsA NC_008060.1 616732 618444 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 616732..618444 Burkholderia cenocepacia AU 1054 4093799 YP_620453.1 CDS ihfB NC_008060.1 618467 618790 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 618467..618790 Burkholderia cenocepacia AU 1054 4093800 YP_620454.1 CDS Bcen_0570 NC_008060.1 618847 619293 D KEGG: bur:Bcep18194_A4162 hypothetical protein; hypothetical protein 618847..619293 Burkholderia cenocepacia AU 1054 4093801 YP_620455.1 CDS Bcen_0571 NC_008060.1 619347 620519 D PFAM: TPR repeat; SMART: Tetratricopeptide region; KEGG: bur:Bcep18194_A4163 TPR repeat protein; hypothetical protein 619347..620519 Burkholderia cenocepacia AU 1054 4093802 YP_620456.1 CDS Bcen_0572 NC_008060.1 620610 622010 D PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: bur:Bcep18194_A4164 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 620610..622010 Burkholderia cenocepacia AU 1054 4093803 YP_620457.1 CDS Bcen_0573 NC_008060.1 622003 622968 D TIGRFAM: RfaE bifunctional protein, domain I; PFAM: PfkB; KEGG: bur:Bcep18194_A4165 ADP-heptose synthase (sugarkinase); bifunctional ADP-heptose synthase 622003..622968 Burkholderia cenocepacia AU 1054 4093804 YP_620458.1 CDS Bcen_0574 NC_008060.1 623033 624025 D TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bur:Bcep18194_A4166 ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 623033..624025 Burkholderia cenocepacia AU 1054 4093805 YP_620459.1 CDS Bcen_0575 NC_008060.1 624100 624447 D PFAM: helix-hairpin-helix motif; KEGG: bur:Bcep18194_A4167 DNA-binding protein; hypothetical protein 624100..624447 Burkholderia cenocepacia AU 1054 4093806 YP_620460.2 CDS cysM NC_008060.1 624661 625563 D catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 624661..625563 Burkholderia cenocepacia AU 1054 4092194 YP_620461.1 CDS Bcen_0577 NC_008060.1 625641 626858 R TIGRFAM: Lytic murein transglycosylase B; KEGG: bur:Bcep18194_A4169 lytic murein transglycosylase B; lytic murein transglycosylase B complement(625641..626858) Burkholderia cenocepacia AU 1054 4092195 YP_620462.1 CDS Bcen_0578 NC_008060.1 627028 627951 D PFAM: histone deacetylase superfamily; KEGG: bur:Bcep18194_A4170 histone deacetylase superfamily; histone deacetylase superfamily protein 627028..627951 Burkholderia cenocepacia AU 1054 4092196 YP_620463.1 CDS Bcen_0579 NC_008060.1 627982 628890 R PFAM: alpha/beta hydrolase fold; PGAP1-like; KEGG: bur:Bcep18194_A4171 alpha/beta hydrolase; alpha/beta hydrolase complement(627982..628890) Burkholderia cenocepacia AU 1054 4092197 YP_620464.1 CDS metN NC_008060.1 628985 630142 D part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 628985..630142 Burkholderia cenocepacia AU 1054 4092198 YP_620465.1 CDS Bcen_0581 NC_008060.1 630132 630785 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4173 ABC metal ion transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 630132..630785 Burkholderia cenocepacia AU 1054 4092199 YP_620466.1 CDS Bcen_0582 NC_008060.1 630815 631609 D TIGRFAM: Lipoprotein YaeC; Twin-arginine translocation pathway signal; PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_A4174 ABC metal ion transporter, periplasmic ligand binding protein; lipoprotein YaeC 630815..631609 Burkholderia cenocepacia AU 1054 4092200 YP_620467.1 CDS Bcen_0583 NC_008060.1 631839 632588 D PFAM: electron transfer flavoprotein beta-subunit; KEGG: bur:Bcep18194_A4175 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 631839..632588 Burkholderia cenocepacia AU 1054 4092201 YP_620468.1 CDS Bcen_0584 NC_008060.1 632605 633540 D PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: bur:Bcep18194_A4176 electron transfer flavoprotein alpha and beta-subunits; electron transfer flavoprotein subunit alpha 632605..633540 Burkholderia cenocepacia AU 1054 4092202 YP_620469.1 CDS Bcen_0585 NC_008060.1 633865 635151 R catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit complement(633865..635151) Burkholderia cenocepacia AU 1054 4092203 YP_620470.1 CDS Bcen_0586 NC_008060.1 635237 635785 D PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_A4179 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 635237..635785 Burkholderia cenocepacia AU 1054 4092204 YP_620471.1 CDS Bcen_0587 NC_008060.1 635876 637054 D PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; KEGG: bur:Bcep18194_A4180 radical SAM family protein; radical SAM family protein 635876..637054 Burkholderia cenocepacia AU 1054 4092205 YP_620472.1 CDS Bcen_0588 NC_008060.1 637106 637573 R KEGG: bur:Bcep18194_A4181 hypothetical protein; hypothetical protein complement(637106..637573) Burkholderia cenocepacia AU 1054 4092206 YP_620473.1 CDS Bcen_0589 NC_008060.1 637685 638824 R KEGG: bur:Bcep18194_A4182 glucose/sorbosone dehydrogenase-like; glucose/sorbosone dehydrogenase-like complement(637685..638824) Burkholderia cenocepacia AU 1054 4092207 YP_620474.1 CDS rpsP NC_008060.1 638977 639231 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 638977..639231 Burkholderia cenocepacia AU 1054 4092208 YP_620475.1 CDS rimM NC_008060.1 639274 639951 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 639274..639951 Burkholderia cenocepacia AU 1054 4092209 YP_620476.1 CDS trmD NC_008060.1 639953 640747 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 639953..640747 Burkholderia cenocepacia AU 1054 4092210 YP_620477.1 CDS rplS NC_008060.1 640881 641273 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 640881..641273 Burkholderia cenocepacia AU 1054 4092211 YP_620478.1 CDS Bcen_0594 NC_008060.1 641361 642047 D PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4187 NUDIX hydrolase; NUDIX hydrolase 641361..642047 Burkholderia cenocepacia AU 1054 4092212 YP_620479.1 CDS Bcen_0595 NC_008060.1 642168 643106 D catalyzes the formation of adenosylcobinamide-phosphate from adenosylcobyric acid; CobD/CbiB family protein 642168..643106 Burkholderia cenocepacia AU 1054 4092719 YP_620480.1 CDS Bcen_0596 NC_008060.1 643184 643501 R KEGG: bur:Bcep18194_A4189 hypothetical protein; hypothetical protein complement(643184..643501) Burkholderia cenocepacia AU 1054 4092720 YP_620481.1 CDS Bcen_0597 NC_008060.1 643562 644503 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(643562..644503) Burkholderia cenocepacia AU 1054 4092721 YP_620482.1 CDS Bcen_0598 NC_008060.1 644500 645759 R PFAM: peptidase M48, Ste24p; KEGG: bur:Bcep18194_A4191 STE24 endopeptidase; Ste24 endopeptidase complement(644500..645759) Burkholderia cenocepacia AU 1054 4092722 YP_620483.1 CDS Bcen_0599 NC_008060.1 645886 646506 D 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 645886..646506 Burkholderia cenocepacia AU 1054 4092723 YP_620484.1 CDS mogA NC_008060.1 646541 647149 R forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA complement(646541..647149) Burkholderia cenocepacia AU 1054 4092724 YP_620485.1 CDS Bcen_0601 NC_008060.1 647133 647744 R PFAM: protein of unknown function DUF615; KEGG: bur:Bcep18194_A4194 protein of unknown function DUF615; hypothetical protein complement(647133..647744) Burkholderia cenocepacia AU 1054 4092725 YP_620486.1 CDS Bcen_0602 NC_008060.1 647863 649233 D PFAM: peptidase U62, modulator of DNA gyrase; KEGG: bur:Bcep18194_A4195 peptidase U62, modulator of DNA gyrase; C69 family peptidase 647863..649233 Burkholderia cenocepacia AU 1054 4092726 YP_620487.1 CDS Bcen_0603 NC_008060.1 649319 649879 R PFAM: dihydrofolate reductase region; KEGG: bur:Bcep18194_A4196 dihydrofolate reductase; dihydrofolate reductase complement(649319..649879) Burkholderia cenocepacia AU 1054 4092727 YP_620488.1 CDS Bcen_0604 NC_008060.1 650116 650442 R KEGG: bur:Bcep18194_A4197 hypothetical protein; hypothetical protein complement(650116..650442) Burkholderia cenocepacia AU 1054 4092728 YP_620489.1 CDS Bcen_0605 NC_008060.1 650941 652338 D PFAM: sigma-54 factor, interaction region; helix-turn-helix, Fis-type; SMART: ATPase; KEGG: bur:Bcep18194_A4198 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 650941..652338 Burkholderia cenocepacia AU 1054 4092729 YP_620490.1 CDS thyA NC_008060.1 652381 653352 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 652381..653352 Burkholderia cenocepacia AU 1054 4092730 YP_620491.1 CDS Bcen_0608 NC_008060.1 656171 656878 R PFAM: regulatory protein, ArsR; KEGG: bur:Bcep18194_A4201 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(656171..656878) Burkholderia cenocepacia AU 1054 4092732 YP_620492.1 CDS Bcen_0609 NC_008060.1 656875 657237 R hypothetical protein complement(656875..657237) Burkholderia cenocepacia AU 1054 4092733 YP_620493.1 CDS Bcen_0610 NC_008060.1 657339 657851 D PFAM: thioesterase superfamily; KEGG: bur:Bcep18194_A4202 thioesterase superfamily; thioesterase 657339..657851 Burkholderia cenocepacia AU 1054 4092734 YP_620494.1 CDS fumC NC_008060.1 657898 659292 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(657898..659292) Burkholderia cenocepacia AU 1054 4092735 YP_620495.1 CDS Bcen_0612 NC_008060.1 659487 660875 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bur:Bcep18194_A4204 multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(659487..660875) Burkholderia cenocepacia AU 1054 4092736 YP_620496.1 CDS Bcen_0613 NC_008060.1 661014 661277 R KEGG: bur:Bcep18194_A4205 hypothetical protein; hypothetical protein complement(661014..661277) Burkholderia cenocepacia AU 1054 4092737 YP_620497.1 CDS Bcen_0614 NC_008060.1 661500 661901 D KEGG: bur:Bcep18194_A4206 hypothetical protein; hypothetical protein 661500..661901 Burkholderia cenocepacia AU 1054 4092738 YP_620498.1 CDS Bcen_0615 NC_008060.1 662033 662815 R KEGG: bur:Bcep18194_A4207 hypothetical protein; hypothetical protein complement(662033..662815) Burkholderia cenocepacia AU 1054 4092683 YP_620499.1 CDS Bcen_0616 NC_008060.1 662976 663314 R PFAM: branched-chain amino acid transport; KEGG: bur:Bcep18194_A4208 protein of unknown function DUF931; branched-chain amino acid transport complement(662976..663314) Burkholderia cenocepacia AU 1054 4092684 YP_620500.1 CDS Bcen_0617 NC_008060.1 663311 664153 R PFAM: AzlC-like; KEGG: bur:Bcep18194_A4209 branched chain amino acid efflux pump, AzlCD (extrudes azaleucine); AzlC-like protein complement(663311..664153) Burkholderia cenocepacia AU 1054 4092685 YP_620501.1 CDS Bcen_0618 NC_008060.1 664206 665126 R PFAM: helix-turn-helix, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: bur:Bcep18194_A4210 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(664206..665126) Burkholderia cenocepacia AU 1054 4092686 YP_620502.1 CDS Bcen_0619 NC_008060.1 665186 665671 R PFAM: CreA; KEGG: bur:Bcep18194_A4211 conserved hypothetical protein, CreA; CreA complement(665186..665671) Burkholderia cenocepacia AU 1054 4092687 YP_620503.1 CDS Bcen_0620 NC_008060.1 666125 666448 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: bur:Bcep18194_A4212 4Fe-4S ferredoxin; 4Fe-4S ferredoxin complement(666125..666448) Burkholderia cenocepacia AU 1054 4092690 YP_620504.1 CDS Bcen_0621 NC_008060.1 666739 667938 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 666739..667938 Burkholderia cenocepacia AU 1054 4092691 YP_620505.1 CDS Bcen_0622 NC_008060.1 668026 668688 D PFAM: protein of unknown function DUF162; KEGG: bur:Bcep18194_A4214 protein of unknown function DUF162; hypothetical protein 668026..668688 Burkholderia cenocepacia AU 1054 4092692 YP_620506.1 CDS Bcen_0623 NC_008060.1 668731 670161 D KEGG: bur:Bcep18194_A4215 Na+/H+ antiporter NhaD and related arsenite permeases-like; Na+/H+ antiporter NhaD and related arsenite permeases-like 668731..670161 Burkholderia cenocepacia AU 1054 4092693 YP_620507.1 CDS Bcen_0624 NC_008060.1 670243 671232 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A4216 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 670243..671232 Burkholderia cenocepacia AU 1054 4092694 YP_620508.1 CDS Bcen_0625 NC_008060.1 671229 672704 D PFAM: protein of unknown function DUF195; KEGG: bur:Bcep18194_A4217 protein of unknown function DUF195; hypothetical protein 671229..672704 Burkholderia cenocepacia AU 1054 4092695 YP_620509.1 CDS Bcen_0626 NC_008060.1 672795 673280 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4218 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(672795..673280) Burkholderia cenocepacia AU 1054 4092696 YP_620510.1 CDS Bcen_0627 NC_008060.1 673277 673552 R KEGG: bur:Bcep18194_A4219 hypothetical protein; hypothetical protein complement(673277..673552) Burkholderia cenocepacia AU 1054 4092697 YP_620511.1 CDS Bcen_0628 NC_008060.1 673590 674888 R PFAM: molybdopterin binding domain; MoeA-like, domain I and II; MoeA-like, domain IV; KEGG: bur:Bcep18194_A4220 molybdopterin binding protein; MoeA-like domain-containing protein complement(673590..674888) Burkholderia cenocepacia AU 1054 4092698 YP_620512.1 CDS mobA NC_008060.1 675000 675617 R in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(675000..675617) Burkholderia cenocepacia AU 1054 4092699 YP_620513.1 CDS moaA NC_008060.1 675647 676759 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(675647..676759) Burkholderia cenocepacia AU 1054 4093432 YP_620514.1 CDS Bcen_0631 NC_008060.1 676891 680070 R TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1; KEGG: bur:Bcep18194_A4223 ribonuclease E and G; ribonuclease complement(676891..680070) Burkholderia cenocepacia AU 1054 4093433 YP_620515.1 CDS Bcen_0632 NC_008060.1 680791 681795 D TIGRFAM: Pseudouridine synthase, RluD; PFAM: RNA-binding S4; pseudouridine synthase; KEGG: bur:Bcep18194_A4224 pseudouridine synthase, RluD; pseudouridine synthase RluD 680791..681795 Burkholderia cenocepacia AU 1054 4093434 YP_620516.1 CDS Bcen_0633 NC_008060.1 681801 682460 D TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_A4225 phosphatase-like; HAD family hydrolase 681801..682460 Burkholderia cenocepacia AU 1054 4093435 YP_620517.1 CDS Bcen_0634 NC_008060.1 682457 682858 D PFAM: Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_A4226 Rieske (2Fe-2S) protein; Rieske (2Fe-2S) protein 682457..682858 Burkholderia cenocepacia AU 1054 4093436 YP_620518.1 CDS Bcen_0635 NC_008060.1 682871 683863 D PFAM: peptidase S49; KEGG: bur:Bcep18194_A4227 peptidase S49; peptidase S49 682871..683863 Burkholderia cenocepacia AU 1054 4093437 YP_620519.1 CDS Bcen_0636 NC_008060.1 683950 684672 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bur:Bcep18194_A4228 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase complement(683950..684672) Burkholderia cenocepacia AU 1054 4093438 YP_620520.1 CDS Bcen_0637 NC_008060.1 684669 685301 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(684669..685301) Burkholderia cenocepacia AU 1054 4093439 YP_620521.1 CDS Bcen_0638 NC_008060.1 685532 686167 D PFAM: protein of unknown function DUF177; KEGG: bur:Bcep18194_A4230 protein of unknown function DUF177; hypothetical protein 685532..686167 Burkholderia cenocepacia AU 1054 4093440 YP_620522.1 CDS rpmF NC_008060.1 686266 686445 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 686266..686445 Burkholderia cenocepacia AU 1054 4093441 YP_620523.1 CDS Bcen_0640 NC_008060.1 686575 687681 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 686575..687681 Burkholderia cenocepacia AU 1054 4093442 YP_620524.1 CDS Bcen_0641 NC_008060.1 687682 688671 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 687682..688671 Burkholderia cenocepacia AU 1054 4093443 YP_620525.1 CDS Bcen_0642 NC_008060.1 688754 689686 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase region; KEGG: bur:Bcep18194_A4234 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 688754..689686 Burkholderia cenocepacia AU 1054 4093444 YP_620526.1 CDS fabG NC_008060.1 689723 690472 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 689723..690472 Burkholderia cenocepacia AU 1054 4093445 YP_620527.1 CDS acpP NC_008060.1 690617 690856 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 690617..690856 Burkholderia cenocepacia AU 1054 4093446 YP_620528.1 CDS Bcen_0645 NC_008060.1 691021 692253 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 691021..692253 Burkholderia cenocepacia AU 1054 4093447 YP_620529.1 CDS Bcen_0646 NC_008060.1 692313 692729 D KEGG: bur:Bcep18194_A4238 hypothetical protein; hypothetical protein 692313..692729 Burkholderia cenocepacia AU 1054 4093448 YP_620530.1 CDS Bcen_0647 NC_008060.1 692821 693420 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 692821..693420 Burkholderia cenocepacia AU 1054 4093449 YP_620531.1 CDS Bcen_0648 NC_008060.1 693507 694124 D KEGG: bur:Bcep18194_A4240 anti sigma-E protein, RseA; anti sigma-E protein, RseA 693507..694124 Burkholderia cenocepacia AU 1054 4093450 YP_620532.1 CDS Bcen_0649 NC_008060.1 694130 695182 D PFAM: MucB/RseB; KEGG: bur:Bcep18194_A4241 sigma E regulatory protein, MucB/RseB; sigma E regulatory protein, MucB/RseB 694130..695182 Burkholderia cenocepacia AU 1054 4093451 YP_620533.1 CDS Bcen_0650 NC_008060.1 695199 696695 D TIGRFAM: Peptidase S1C, Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: bur:Bcep18194_A4242 peptidase S1C, Do; peptidase S1C, Do 695199..696695 Burkholderia cenocepacia AU 1054 4092177 YP_620534.1 CDS Bcen_0651 NC_008060.1 696703 696939 D PFAM: glutaredoxin 2; KEGG: bur:Bcep18194_A4243 glutaredoxin 2; glutaredoxin 696703..696939 Burkholderia cenocepacia AU 1054 4092178 YP_620535.1 CDS Bcen_0652 NC_008060.1 697135 698928 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 697135..698928 Burkholderia cenocepacia AU 1054 4092179 YP_620536.1 CDS Bcen_0653 NC_008060.1 698945 699838 D KEGG: bur:Bcep18194_A4245 peptidase S26A, signal peptidase I TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: peptidase S24, S26A and S26B; peptidase S26A, signal peptidase I 698945..699838 Burkholderia cenocepacia AU 1054 4092180 YP_620537.1 CDS Bcen_0654 NC_008060.1 699993 701222 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 699993..701222 Burkholderia cenocepacia AU 1054 4092181 YP_620538.1 CDS era NC_008060.1 701283 702182 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 701283..702182 Burkholderia cenocepacia AU 1054 4092182 YP_620539.1 CDS recO NC_008060.1 702169 703005 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 702169..703005 Burkholderia cenocepacia AU 1054 4092183 YP_620540.1 CDS Bcen_0657 NC_008060.1 703002 703778 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 703002..703778 Burkholderia cenocepacia AU 1054 4092184 YP_620541.1 CDS acpS NC_008060.1 703860 704306 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 703860..704306 Burkholderia cenocepacia AU 1054 4092185 YP_620542.1 CDS Bcen_0659 NC_008060.1 704323 705351 D hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 704323..705351 Burkholderia cenocepacia AU 1054 4092186 YP_620543.1 CDS Bcen_0660 NC_008060.1 705529 706914 R PFAM: response regulator receiver; sigma-54 factor, interaction region; helix-turn-helix, Fis-type; SMART: ATPase; KEGG: bur:Bcep18194_A4252 two component, sigma54 specific, transcriptional regulator, fis family; Fis family transcriptional regulator complement(705529..706914) Burkholderia cenocepacia AU 1054 4092187 YP_620544.1 CDS Bcen_0661 NC_008060.1 707182 707739 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(707182..707739) Burkholderia cenocepacia AU 1054 4092188 YP_620545.1 CDS Bcen_0662 NC_008060.1 707878 709071 R KEGG: bur:Bcep18194_A4254 hypothetical protein; hypothetical protein complement(707878..709071) Burkholderia cenocepacia AU 1054 4092189 YP_620546.1 CDS uvrC NC_008060.1 709148 711193 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 709148..711193 Burkholderia cenocepacia AU 1054 4092190 YP_620547.1 CDS Bcen_0664 NC_008060.1 711283 711870 D KEGG: bur:Bcep18194_A4256 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 711283..711870 Burkholderia cenocepacia AU 1054 4092191 YP_620548.1 CDS Bcen_0665 NC_008060.1 713184 713360 D KEGG: bur:Bcep18194_B1598 diguanylate cyclase (GGDEF domain); hypothetical protein 713184..713360 Burkholderia cenocepacia AU 1054 4093454 YP_620549.1 CDS Bcen_0666 NC_008060.1 713473 714405 D PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_I0801 hydrolase, alpha/beta fold family; alpha/beta hydrolase 713473..714405 Burkholderia cenocepacia AU 1054 4093455 YP_620550.1 CDS Bcen_0667 NC_008060.1 714503 715051 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4258 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(714503..715051) Burkholderia cenocepacia AU 1054 4093456 YP_620551.1 CDS Bcen_0668 NC_008060.1 715102 715722 R PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_A4259 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(715102..715722) Burkholderia cenocepacia AU 1054 4093457 YP_620552.1 CDS Bcen_0669 NC_008060.1 715807 716106 D KEGG: bur:Bcep18194_A4260 hypothetical protein; hypothetical protein 715807..716106 Burkholderia cenocepacia AU 1054 4093458 YP_620553.1 CDS Bcen_0670 NC_008060.1 716106 716912 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: bur:Bcep18194_A4261 peptidase M24A, methionine aminopeptidase, subfamily 1; methionine aminopeptidase 716106..716912 Burkholderia cenocepacia AU 1054 4093459 YP_620554.1 CDS Bcen_0671 NC_008060.1 717025 717528 R SMART: GAF; KEGG: bur:Bcep18194_A4262 GAF sensor protein; GAF sensor protein complement(717025..717528) Burkholderia cenocepacia AU 1054 4093460 YP_620555.1 CDS Bcen_0672 NC_008060.1 717643 718560 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4263 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(717643..718560) Burkholderia cenocepacia AU 1054 4093461 YP_620556.1 CDS Bcen_0673 NC_008060.1 718672 719538 D PFAM: Pirin-like; KEGG: bur:Bcep18194_A4264 pirin-like protein; Pirin-like protein 718672..719538 Burkholderia cenocepacia AU 1054 4093462 YP_620557.1 CDS Bcen_0674 NC_008060.1 719689 720180 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4265 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 719689..720180 Burkholderia cenocepacia AU 1054 4093463 YP_620558.1 CDS Bcen_0675 NC_008060.1 720203 721072 R KEGG: bur:Bcep18194_A4266 membrane protein; membrane protein complement(720203..721072) Burkholderia cenocepacia AU 1054 4093464 YP_620559.1 CDS Bcen_0676 NC_008060.1 721083 721529 R PFAM: protein of unknown function DUF461; KEGG: bpm:BURPS1710b_2874 hypothetical protein; hypothetical protein complement(721083..721529) Burkholderia cenocepacia AU 1054 4093465 YP_620560.1 CDS Bcen_0677 NC_008060.1 721538 722173 R PFAM: electron transport protein SCO1/SenC; KEGG: bur:Bcep18194_A4268 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC complement(721538..722173) Burkholderia cenocepacia AU 1054 4093466 YP_620561.1 CDS Bcen_0678 NC_008060.1 722454 723206 D KEGG: bur:Bcep18194_A4269 HAD-superfamily hydrolase subfamily IIB TIGRFAM: HAD-superfamily hydrolase subfamily IIB; PFAM: trehalose-phosphatase; HAD family hydrolase 722454..723206 Burkholderia cenocepacia AU 1054 4093467 YP_620562.1 CDS Bcen_0679 NC_008060.1 723203 724588 D KEGG: bur:Bcep18194_A4270 alpha,alpha-trehalose-phosphate synthase (UDP-forming) TIGRFAM: Alpha,alpha-trehalose-phosphate synthase; PFAM: glycosyl transferase, family 20; Alpha,alpha-trehalose-phosphate synthase 723203..724588 Burkholderia cenocepacia AU 1054 4093468 YP_620563.1 CDS Bcen_0680 NC_008060.1 724670 726583 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4271 ABC efflux pump, fused ATPase and inner membrane subunits; ABC transporter complement(724670..726583) Burkholderia cenocepacia AU 1054 4092798 YP_620564.1 CDS Bcen_0681 NC_008060.1 727068 728132 D PFAM: glycosyl transferase, group 1; KEGG: bur:Bcep18194_A4272 glycosyl transferase, group 1; group 1 glycosyl transferase 727068..728132 Burkholderia cenocepacia AU 1054 4092799 YP_620565.1 CDS Bcen_0682 NC_008060.1 728345 729178 D KEGG: bur:Bcep18194_A4273 hypothetical protein; hypothetical protein 728345..729178 Burkholderia cenocepacia AU 1054 4092800 YP_620566.1 CDS Bcen_0683 NC_008060.1 729218 729682 D KEGG: bur:Bcep18194_A4274 membrane protein-like; membrane protein-like 729218..729682 Burkholderia cenocepacia AU 1054 4092801 YP_620567.1 CDS Bcen_0684 NC_008060.1 729886 731238 R PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: bur:Bcep18194_A4275 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing-like protein complement(729886..731238) Burkholderia cenocepacia AU 1054 4092802 YP_620568.1 CDS Bcen_0685 NC_008060.1 731596 732345 D PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: bur:Bcep18194_A4276 transcriptional regulator, GntR family; GntR family transcriptional regulator 731596..732345 Burkholderia cenocepacia AU 1054 4092803 YP_620569.1 CDS Bcen_0686 NC_008060.1 732482 733867 R PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_A4277 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor complement(732482..733867) Burkholderia cenocepacia AU 1054 4092804 YP_620570.1 CDS Bcen_0687 NC_008060.1 734002 736251 R KEGG: bur:Bcep18194_A4278 phospholipase C' TIGRFAM: Twin-arginine translocation pathway signal; PFAM: phosphoesterase; protein of unknown function DUF756; twin-arginine translocation pathway signal complement(734002..736251) Burkholderia cenocepacia AU 1054 4092805 YP_620571.1 CDS Bcen_0688 NC_008060.1 736429 737289 R TIGRFAM: pyridoxal kinase; KEGG: bur:Bcep18194_A4279 pyridoxal kinase; pyridoxal kinase complement(736429..737289) Burkholderia cenocepacia AU 1054 4092806 YP_620572.1 CDS Bcen_0689 NC_008060.1 737372 738535 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A4280 alpha/beta hydrolase; alpha/beta hydrolase 737372..738535 Burkholderia cenocepacia AU 1054 4092807 YP_620573.1 CDS Bcen_0690 NC_008060.1 738572 739570 R PFAM: luciferase-like; KEGG: bur:Bcep18194_A4281 flavin-dependent oxidoreductase; luciferase-like protein complement(738572..739570) Burkholderia cenocepacia AU 1054 4092808 YP_620574.1 CDS Bcen_0691 NC_008060.1 740209 741384 D PFAM: glycosyl transferase, family 2; KEGG: bur:Bcep18194_A4282 glycosyl transferase, family 2; glycosyl transferase family protein 740209..741384 Burkholderia cenocepacia AU 1054 4092809 YP_620575.1 CDS Bcen_0692 NC_008060.1 741540 742961 D PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; KEGG: bur:Bcep18194_A4283 radical SAM family protein; radical SAM family protein 741540..742961 Burkholderia cenocepacia AU 1054 4092810 YP_620576.1 CDS Bcen_0693 NC_008060.1 742965 743849 D PFAM: YdjC-like protein; KEGG: bur:Bcep18194_A4284 YdjC-like protein; protein YebG 742965..743849 Burkholderia cenocepacia AU 1054 4092811 YP_620577.1 CDS Bcen_0694 NC_008060.1 743846 744904 D KEGG: bur:Bcep18194_A4285 hypothetical protein; hypothetical protein 743846..744904 Burkholderia cenocepacia AU 1054 4092812 YP_620578.1 CDS Bcen_0695 NC_008060.1 744939 745547 D KEGG: bur:Bcep18194_A4286 hypothetical protein; hypothetical protein 744939..745547 Burkholderia cenocepacia AU 1054 4092813 YP_620579.1 CDS Bcen_0696 NC_008060.1 745911 746600 D TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4287 ABC polar amino acid transporter, inner membrane subunit; amino acid ABC transporter permease 745911..746600 Burkholderia cenocepacia AU 1054 4092814 YP_620580.1 CDS Bcen_0697 NC_008060.1 746597 747310 D TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpm:BURPS1710b_2852 histidine ABC transporter permease; amino acid ABC transporter permease 746597..747310 Burkholderia cenocepacia AU 1054 4092815 YP_620581.1 CDS Bcen_0698 NC_008060.1 747307 748131 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4289 ABC polar amino acid transporter, ATPase subunit; ABC transporter 747307..748131 Burkholderia cenocepacia AU 1054 4092816 YP_620582.1 CDS Bcen_0699 NC_008060.1 748154 749194 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_A4290 transcriptional regulator, AraC family; AraC family transcriptional regulator 748154..749194 Burkholderia cenocepacia AU 1054 4092817 YP_620583.1 CDS Bcen_0700 NC_008060.1 749932 751182 R PFAM: transposase, mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein; transposase, mutator type complement(749932..751182) Burkholderia cenocepacia AU 1054 4092818 YP_620584.1 CDS argD NC_008060.1 751557 752789 D DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 751557..752789 Burkholderia cenocepacia AU 1054 4092819 YP_620585.1 CDS Bcen_0702 NC_008060.1 752820 753887 D PFAM: arginine N-succinyltransferase beta subunit; KEGG: bur:Bcep18194_A4292 arginine N-succinyltransferase; arginine N-succinyltransferase 752820..753887 Burkholderia cenocepacia AU 1054 4092820 YP_620586.1 CDS Bcen_0703 NC_008060.1 753884 754915 D PFAM: arginine N-succinyltransferase beta subunit; KEGG: bur:Bcep18194_A4293 arginine N-succinyltransferase; arginine N-succinyltransferase 753884..754915 Burkholderia cenocepacia AU 1054 4092821 YP_620587.1 CDS astD NC_008060.1 754923 756386 D a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 754923..756386 Burkholderia cenocepacia AU 1054 4092822 YP_620588.1 CDS Bcen_0705 NC_008060.1 756401 757741 D catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 756401..757741 Burkholderia cenocepacia AU 1054 4092823 YP_620589.1 CDS Bcen_0706 NC_008060.1 757749 758777 D catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 757749..758777 Burkholderia cenocepacia AU 1054 4092824 YP_620590.1 CDS Bcen_0707 NC_008060.1 758783 759133 D hypothetical protein 758783..759133 Burkholderia cenocepacia AU 1054 4092825 YP_620591.1 CDS Bcen_0708 NC_008060.1 759133 759927 D PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_A4297 ABC transporter, periplasmic ligand binding protein; extracellular solute-binding protein 759133..759927 Burkholderia cenocepacia AU 1054 4092826 YP_620592.1 CDS Bcen_0709 NC_008060.1 760027 761550 R KEGG: bur:Bcep18194_A4298 signal transduction protein; signal transduction protein complement(760027..761550) Burkholderia cenocepacia AU 1054 4092827 YP_620593.1 CDS Bcen_0710 NC_008060.1 761578 763413 R TIGRFAM: PAS; GGDEF domain; PFAM: GGDEF; EAL; PAS fold-4; KEGG: bur:Bcep18194_A4299 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(761578..763413) Burkholderia cenocepacia AU 1054 4092828 YP_620594.1 CDS Bcen_0711 NC_008060.1 763599 764147 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin; KEGG: bur:Bcep18194_A4300 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; redoxin 763599..764147 Burkholderia cenocepacia AU 1054 4092829 YP_620595.1 CDS Bcen_0712 NC_008060.1 764235 764864 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_A4301 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(764235..764864) Burkholderia cenocepacia AU 1054 4092830 YP_620596.1 CDS Bcen_0713 NC_008060.1 765083 766144 D PFAM: transposase, IS891/IS1136/IS1341; transposase, IS605 OrfB; KEGG: noc:Noc_1587 transposase; transposase, IS605 OrfB 765083..766144 Burkholderia cenocepacia AU 1054 4092831 YP_620597.1 CDS Bcen_0714 NC_008060.1 766264 767760 D PFAM: protein of unknown function DUF88; KEGG: bur:Bcep18194_A4302 protein of unknown function DUF88; hypothetical protein 766264..767760 Burkholderia cenocepacia AU 1054 4092832 YP_620598.1 CDS Bcen_0715 NC_008060.1 767870 768253 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A4303 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(767870..768253) Burkholderia cenocepacia AU 1054 4092833 YP_620599.1 CDS Bcen_0716 NC_008060.1 768475 769737 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902; KEGG: bte:BTH_II1545 ISBma3, transposase; transposase IS116/IS110/IS902 complement(768475..769737) Burkholderia cenocepacia AU 1054 4092834 YP_620600.1 CDS Bcen_0717 NC_008060.1 769937 773245 R PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_A4304 acriflavin resistance protein; acriflavin resistance protein complement(769937..773245) Burkholderia cenocepacia AU 1054 4092835 YP_620601.1 CDS Bcen_0718 NC_008060.1 773249 776368 R PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_A4305 acriflavin resistance protein; acriflavin resistance protein complement(773249..776368) Burkholderia cenocepacia AU 1054 4092836 YP_620602.1 CDS Bcen_0719 NC_008060.1 776384 777757 R PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_A4306 secretion protein HlyD family; secretion protein HlyD complement(776384..777757) Burkholderia cenocepacia AU 1054 4092309 YP_620603.1 CDS Bcen_0720 NC_008060.1 778012 778836 R PFAM: regulatory proteins, IclR; KEGG: bpm:BURPS1710b_1502 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(778012..778836) Burkholderia cenocepacia AU 1054 4092310 YP_620604.1 CDS Bcen_0721 NC_008060.1 779452 781488 R KEGG: bur:Bcep18194_A4309 phosphatase-like; phosphatase-like protein complement(779452..781488) Burkholderia cenocepacia AU 1054 4092311 YP_620605.1 CDS Bcen_0722 NC_008060.1 781607 782800 R PFAM: Rh-like protein/ammonium transporter; KEGG: bur:Bcep18194_A4310 Rh-like protein/ammonium transporter; Rh-like protein/ammonium transporter complement(781607..782800) Burkholderia cenocepacia AU 1054 4092312 YP_620606.1 CDS Bcen_0723 NC_008060.1 783055 783390 R KEGG: bur:Bcep18194_A4311 hypothetical protein; hypothetical protein complement(783055..783390) Burkholderia cenocepacia AU 1054 4092313 YP_620607.1 CDS Bcen_0724 NC_008060.1 783588 784016 D KEGG: bur:Bcep18194_A4312 hypothetical protein; hypothetical protein 783588..784016 Burkholderia cenocepacia AU 1054 4092314 YP_620608.1 CDS Bcen_0725 NC_008060.1 784107 784562 D PFAM: protein of unknown function UPF0074; KEGG: bur:Bcep18194_A4313 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 784107..784562 Burkholderia cenocepacia AU 1054 4092315 YP_620609.1 CDS Bcen_0726 NC_008060.1 784695 785336 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_A4314 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 784695..785336 Burkholderia cenocepacia AU 1054 4092316 YP_620610.1 CDS Bcen_0727 NC_008060.1 785572 786042 D PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_A4315 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 785572..786042 Burkholderia cenocepacia AU 1054 4092317 YP_620611.1 CDS Bcen_0728 NC_008060.1 786073 786846 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4316 ABC spermidine/putrescine transporter, ATPase subunit; ABC transporter complement(786073..786846) Burkholderia cenocepacia AU 1054 4092318 YP_620612.1 CDS Bcen_0729 NC_008060.1 786851 788539 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4317 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component complement(786851..788539) Burkholderia cenocepacia AU 1054 4092319 YP_620613.1 CDS Bcen_0730 NC_008060.1 788529 789572 R PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_A4318 ABC transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(788529..789572) Burkholderia cenocepacia AU 1054 4092320 YP_620614.1 CDS Bcen_0731 NC_008060.1 789816 789977 D KEGG: bur:Bcep18194_A4319 hypothetical protein; hypothetical protein 789816..789977 Burkholderia cenocepacia AU 1054 4092321 YP_620615.1 CDS Bcen_0732 NC_008060.1 790125 791492 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_A4320 amino acid transporter; amino acid permease-associated region complement(790125..791492) Burkholderia cenocepacia AU 1054 4092322 YP_620616.1 CDS Bcen_0733 NC_008060.1 791785 794079 R PFAM: protein of unknown function DUF893, YccS/YhfK; KEGG: bur:Bcep18194_A4321 protein of unknown function DUF893, YccS/YhfK; hypothetical protein complement(791785..794079) Burkholderia cenocepacia AU 1054 4092323 YP_620617.1 CDS Bcen_0734 NC_008060.1 794259 797597 D TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: bur:Bcep18194_A4322 exodeoxyribonuclease V, RecC subunit; exodeoxyribonuclease V subunit gamma 794259..797597 Burkholderia cenocepacia AU 1054 4092324 YP_620618.1 CDS Bcen_0735 NC_008060.1 797594 803617 D KEGG: bur:Bcep18194_A4323 exodeoxyribonuclease V, beta subunit TIGRFAM: exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V, alpha subunit; PFAM: UvrD/REP helicase; exodeoxyribonuclease V subunit beta 797594..803617 Burkholderia cenocepacia AU 1054 4092325 YP_620619.1 CDS Bcen_0736 NC_008060.1 803614 804018 D PFAM: Class I peptide chain release factor; KEGG: bur:Bcep18194_A4325 class I peptide chain release factor; peptidyl-tRNA hydrolase domain-containing protein 803614..804018 Burkholderia cenocepacia AU 1054 4092326 YP_620620.1 CDS Bcen_0737 NC_008060.1 804070 805350 R PFAM: EAL; KEGG: bur:Bcep18194_A4326 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase complement(804070..805350) Burkholderia cenocepacia AU 1054 4092327 YP_620621.1 CDS Bcen_0738 NC_008060.1 805352 805756 R hypothetical protein complement(805352..805756) Burkholderia cenocepacia AU 1054 4092328 YP_620622.1 CDS Bcen_0739 NC_008060.1 805865 806791 R PFAM: protein of unknown function DUF6, transmembrane; UAA transporter; KEGG: bur:Bcep18194_A4328 protein of unknown function DUF6, transmembrane; hypothetical protein complement(805865..806791) Burkholderia cenocepacia AU 1054 4093561 YP_620623.1 CDS Bcen_0740 NC_008060.1 806937 807191 R KEGG: bur:Bcep18194_A4329 hypothetical protein; hypothetical protein complement(806937..807191) Burkholderia cenocepacia AU 1054 4093562 YP_620624.1 CDS Bcen_0741 NC_008060.1 807408 807620 R KEGG: bur:Bcep18194_A4330 hypothetical protein; hypothetical protein complement(807408..807620) Burkholderia cenocepacia AU 1054 4093563 YP_620625.1 CDS Bcen_0742 NC_008060.1 807872 809803 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(807872..809803) Burkholderia cenocepacia AU 1054 4093564 YP_620626.1 CDS Bcen_0743 NC_008060.1 810667 811299 D PFAM: cytochrome B561; KEGG: bur:Bcep18194_A4333 cytochrome b561; cytochrome B561 810667..811299 Burkholderia cenocepacia AU 1054 4093566 YP_620627.1 CDS Bcen_0744 NC_008060.1 811327 812115 D PFAM: oxidoreductase, molybdopterin binding; KEGG: bur:Bcep18194_A4334 oxidoreductase, molybdopterin binding; oxidoreductase, molybdopterin binding 811327..812115 Burkholderia cenocepacia AU 1054 4093567 YP_620628.1 CDS Bcen_0745 NC_008060.1 812150 812431 R PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_A4335 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(812150..812431) Burkholderia cenocepacia AU 1054 4093568 YP_620629.1 CDS Bcen_0746 NC_008060.1 812428 812781 R PFAM: protein of unknown function DUF891; KEGG: bur:Bcep18194_A4336 protein of unknown function DUF891; hypothetical protein complement(812428..812781) Burkholderia cenocepacia AU 1054 4093569 YP_620630.1 CDS Bcen_0747 NC_008060.1 813292 814494 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_A4337 protein of unknown function DUF6, transmembrane; hypothetical protein 813292..814494 Burkholderia cenocepacia AU 1054 4093570 YP_620631.1 CDS Bcen_0748 NC_008060.1 814516 815715 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4338 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(814516..815715) Burkholderia cenocepacia AU 1054 4093571 YP_620632.1 CDS Bcen_0749 NC_008060.1 815903 816727 R PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_A4339 metallophosphoesterase; metallophosphoesterase complement(815903..816727) Burkholderia cenocepacia AU 1054 4093572 YP_620633.1 CDS Bcen_0750 NC_008060.1 816810 817841 R PFAM: ABC transporter related; Transport-associated OB; SMART: ATPase; KEGG: bur:Bcep18194_A4340 ABC spermidine/putrescine transporter, ATPase subunit; ABC transporter complement(816810..817841) Burkholderia cenocepacia AU 1054 4093573 YP_620634.1 CDS Bcen_0751 NC_008060.1 817856 818758 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4341 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(817856..818758) Burkholderia cenocepacia AU 1054 4093574 YP_620635.1 CDS Bcen_0752 NC_008060.1 818769 819593 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4342 ABC transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component complement(818769..819593) Burkholderia cenocepacia AU 1054 4093575 YP_620636.1 CDS Bcen_0753 NC_008060.1 819611 820708 R PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_A4343 ABC transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(819611..820708) Burkholderia cenocepacia AU 1054 4093576 YP_620637.1 CDS Bcen_0754 NC_008060.1 820720 821745 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4344 transcriptional regulator, LacI family; LacI family transcription regulator complement(820720..821745) Burkholderia cenocepacia AU 1054 4093577 YP_620638.1 CDS Bcen_0755 NC_008060.1 821868 822488 R KEGG: bur:Bcep18194_A4345 hypothetical protein; hypothetical protein complement(821868..822488) Burkholderia cenocepacia AU 1054 4093578 YP_620639.1 CDS Bcen_0756 NC_008060.1 822545 823531 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nmu:Nmul_A1292 short-chain dehydrogenase/reductase SDR; twin-arginine translocation pathway signal complement(822545..823531) Burkholderia cenocepacia AU 1054 4093277 YP_620640.1 CDS Bcen_0757 NC_008060.1 823686 824690 R PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_B0501 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase complement(823686..824690) Burkholderia cenocepacia AU 1054 4093278 YP_620641.1 CDS Bcen_0758 NC_008060.1 824790 825218 R PFAM: DoxX; KEGG: bur:Bcep18194_B0502 DoxX family membrane protein; DoxX protein complement(824790..825218) Burkholderia cenocepacia AU 1054 4093279 YP_620642.1 CDS Bcen_0759 NC_008060.1 825294 826415 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B0503 NADH-flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(825294..826415) Burkholderia cenocepacia AU 1054 4093280 YP_620643.1 CDS Bcen_0760 NC_008060.1 826572 827471 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_B0504 transcriptional regulator, LysR family; LysR family transcriptional regulator 826572..827471 Burkholderia cenocepacia AU 1054 4093281 YP_620644.1 CDS Bcen_0761 NC_008060.1 827619 828245 D KEGG: pfo:Pfl_4462 hypothetical protein; hypothetical protein 827619..828245 Burkholderia cenocepacia AU 1054 4093282 YP_620645.1 CDS Bcen_0762 NC_008060.1 828660 829892 D PFAM: dehydrogenase, E1 component; KEGG: bur:Bcep18194_A4360 3-methyl-2-oxobutanoate dehydrogenase (lipoamide); 3-methyl-2-oxobutanoate dehydrogenase 828660..829892 Burkholderia cenocepacia AU 1054 4093283 YP_620646.1 CDS Bcen_0763 NC_008060.1 829895 830935 D PFAM: Transketolase, central region; Transketolase-like; KEGG: bur:Bcep18194_A4361 pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) beta subunit; transketolase, central region 829895..830935 Burkholderia cenocepacia AU 1054 4093284 YP_620647.1 CDS Bcen_0764 NC_008060.1 830937 832247 D PFAM: biotin/lipoyl attachment; catalytic domain of components of various dehydrogenase complexes; E3 binding; KEGG: bur:Bcep18194_A4362 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) subunit; branched-chain alpha-keto acid dehydrogenase subunit E2 830937..832247 Burkholderia cenocepacia AU 1054 4093285 YP_620648.1 CDS Bcen_0765 NC_008060.1 832252 833643 D E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 832252..833643 Burkholderia cenocepacia AU 1054 4093286 YP_620649.1 CDS Bcen_0766 NC_008060.1 833918 834613 D PFAM: Male sterility-like; KEGG: bur:Bcep18194_A4377 nucleoside-diphosphate-sugar epimerases-like; Male sterility-like protein 833918..834613 Burkholderia cenocepacia AU 1054 4093287 YP_620650.1 CDS Bcen_0767 NC_008060.1 834696 835043 D KEGG: bur:Bcep18194_A4382 hypothetical protein; hypothetical protein 834696..835043 Burkholderia cenocepacia AU 1054 4093288 YP_620651.1 CDS Bcen_0768 NC_008060.1 835130 836437 D PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: bur:Bcep18194_A4383 cytosine/purines, uracil, thiamine, allantoin transporter; cytosine/purines uracil thiamine allantoin permease 835130..836437 Burkholderia cenocepacia AU 1054 4093289 YP_620652.1 CDS Bcen_0769 NC_008060.1 836596 837666 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_A4384 outer membrane protein, (porin); porin 836596..837666 Burkholderia cenocepacia AU 1054 4093290 YP_620653.1 CDS Bcen_0770 NC_008060.1 837733 838689 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4389 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(837733..838689) Burkholderia cenocepacia AU 1054 4093291 YP_620654.1 CDS Bcen_0771 NC_008060.1 838878 840188 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4390 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 838878..840188 Burkholderia cenocepacia AU 1054 4093292 YP_620655.1 CDS Bcen_0772 NC_008060.1 840214 841491 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 840214..841491 Burkholderia cenocepacia AU 1054 4093293 YP_620656.1 CDS Bcen_0773 NC_008060.1 841516 842538 D PFAM: histone deacetylase superfamily; KEGG: bur:Bcep18194_A4392 histone deacetylase superfamily; histone deacetylase superfamily protein 841516..842538 Burkholderia cenocepacia AU 1054 4093294 YP_620657.1 CDS Bcen_0774 NC_008060.1 842641 843846 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4398 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(842641..843846) Burkholderia cenocepacia AU 1054 4093295 YP_620658.1 CDS Bcen_0775 NC_008060.1 844600 845583 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4399 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(844600..845583) Burkholderia cenocepacia AU 1054 4093296 YP_620659.1 CDS Bcen_0776 NC_008060.1 845601 846593 D PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: bur:Bcep18194_A4400 L-serine ammonia-lyase; L-serine ammonia-lyase 845601..846593 Burkholderia cenocepacia AU 1054 4093694 YP_620660.1 CDS Bcen_0777 NC_008060.1 846841 847992 R KEGG: bur:Bcep18194_A4401 hypothetical protein; hypothetical protein complement(846841..847992) Burkholderia cenocepacia AU 1054 4093695 YP_620661.1 CDS Bcen_0778 NC_008060.1 848109 849002 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4402 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(848109..849002) Burkholderia cenocepacia AU 1054 4093696 YP_620662.1 CDS Bcen_0779 NC_008060.1 849113 849868 D PFAM: Integral membrane protein TerC; KEGG: bur:Bcep18194_A4403 integral membrane protein TerC; integral membrane protein TerC 849113..849868 Burkholderia cenocepacia AU 1054 4093697 YP_620663.1 CDS Bcen_0780 NC_008060.1 849959 850261 D KEGG: bur:Bcep18194_A4404 hypothetical protein; hypothetical protein 849959..850261 Burkholderia cenocepacia AU 1054 4093698 YP_620664.1 CDS Bcen_0781 NC_008060.1 850374 850784 R PFAM: heat shock protein Hsp20; KEGG: bur:Bcep18194_A4405 heat shock protein HSP20; heat shock protein Hsp20 complement(850374..850784) Burkholderia cenocepacia AU 1054 4093699 YP_620665.1 CDS Bcen_0782 NC_008060.1 850801 851241 R PFAM: heat shock protein Hsp20; KEGG: bur:Bcep18194_A4406 heat shock protein HSP20; heat shock protein Hsp20 complement(850801..851241) Burkholderia cenocepacia AU 1054 4093700 YP_620666.1 CDS Bcen_0783 NC_008060.1 851488 852405 D PFAM: 3-hydroxyacyl-CoA dehydrogenase-like; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A4407 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 851488..852405 Burkholderia cenocepacia AU 1054 4093701 YP_620667.1 CDS Bcen_0784 NC_008060.1 852451 852732 R KEGG: bur:Bcep18194_A4408 hypothetical protein; hypothetical protein complement(852451..852732) Burkholderia cenocepacia AU 1054 4093702 YP_620668.1 CDS Bcen_0785 NC_008060.1 852894 853742 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4409 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(852894..853742) Burkholderia cenocepacia AU 1054 4093703 YP_620669.1 CDS Bcen_0786 NC_008060.1 854072 854467 D PFAM: malonate transporter MadL subunit; KEGG: bur:Bcep18194_A4410 malonate/sodium symporter MadL subunit; malonate transporter MadL subunit 854072..854467 Burkholderia cenocepacia AU 1054 4093704 YP_620670.1 CDS Bcen_0787 NC_008060.1 854479 855246 D TIGRFAM: malonate transporter, MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: bur:Bcep18194_A4411 malonate/sodium symporter MadM subunit; malonate transporter subunit MadM 854479..855246 Burkholderia cenocepacia AU 1054 4093705 YP_620671.1 CDS Bcen_0788 NC_008060.1 855378 857024 D KEGG: bur:Bcep18194_A4412 hypothetical protein; hypothetical protein 855378..857024 Burkholderia cenocepacia AU 1054 4093706 YP_620672.1 CDS Bcen_0789 NC_008060.1 857035 857349 D acyl carrier protein of malonate decarboxylase; malonate decarboxylase subunit delta 857035..857349 Burkholderia cenocepacia AU 1054 4093707 YP_620673.1 CDS Bcen_0790 NC_008060.1 857346 858275 D The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 857346..858275 Burkholderia cenocepacia AU 1054 4093708 YP_620674.1 CDS Bcen_0791 NC_008060.1 858355 859062 D PFAM: malonate decarboxylase gamma subunit; KEGG: bur:Bcep18194_A4415 malonate decarboxylase gamma subunit; malonate decarboxylase subunit gamma 858355..859062 Burkholderia cenocepacia AU 1054 4093709 YP_620675.1 CDS Bcen_0792 NC_008060.1 859049 859717 D catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 859049..859717 Burkholderia cenocepacia AU 1054 4093710 YP_620676.1 CDS Bcen_0793 NC_008060.1 859714 860580 D PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: bur:Bcep18194_A4417 triphosphoribosyl-dephospho-CoA synthase; triphosphoribosyl-dephospho-CoA synthase 859714..860580 Burkholderia cenocepacia AU 1054 4093711 YP_620677.1 CDS Bcen_0794 NC_008060.1 860577 861509 D KEGG: bur:Bcep18194_A4418 malonyl CoA-acylcarrier protein transacylase; malonyl CoA-acylcarrier protein transacylase 860577..861509 Burkholderia cenocepacia AU 1054 4093712 YP_620678.1 CDS Bcen_0795 NC_008060.1 861627 862148 D KEGG: bur:Bcep18194_A4419 hypothetical protein; hypothetical protein 861627..862148 Burkholderia cenocepacia AU 1054 4091548 YP_620679.1 CDS Bcen_0796 NC_008060.1 862274 862921 D PFAM: phosphoribosyltransferase; KEGG: bur:Bcep18194_A4420 phosphoribosyltransferase; phosphoribosyltransferase 862274..862921 Burkholderia cenocepacia AU 1054 4091549 YP_620680.1 CDS Bcen_0797 NC_008060.1 862929 864110 R PFAM: PHB de-polymerase-like; KEGG: bur:Bcep18194_A4421 polyhydroxyalkanoate depolymerase; PHB de-polymerase-like complement(862929..864110) Burkholderia cenocepacia AU 1054 4091550 YP_620681.1 CDS Bcen_0798 NC_008060.1 864320 864949 D PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_A4422 glutathione S-transferase-like; glutathione S-transferase 864320..864949 Burkholderia cenocepacia AU 1054 4091551 YP_620682.1 CDS Bcen_0799 NC_008060.1 865134 865328 D KEGG: bur:Bcep18194_A4423 hypothetical protein; hypothetical protein 865134..865328 Burkholderia cenocepacia AU 1054 4091552 YP_620683.1 CDS Bcen_0800 NC_008060.1 865437 866795 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4424 major facilitator superfamily (MFS_1) transporter; general substrate transporter complement(865437..866795) Burkholderia cenocepacia AU 1054 4091553 YP_620684.1 CDS Bcen_0801 NC_008060.1 867026 867379 R hypothetical protein complement(867026..867379) Burkholderia cenocepacia AU 1054 4091554 YP_620685.1 CDS Bcen_0802 NC_008060.1 867466 867798 D PFAM: protein of unknown function UPF0060; KEGG: bur:Bcep18194_A4425 protein of unknown function UPF0060; hypothetical protein 867466..867798 Burkholderia cenocepacia AU 1054 4091555 YP_620686.1 CDS Bcen_0803 NC_008060.1 867818 868552 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(867818..868552) Burkholderia cenocepacia AU 1054 4091556 YP_620687.1 CDS Bcen_0804 NC_008060.1 868593 869036 R PFAM: ribonuclease H; KEGG: bur:Bcep18194_A4427 ribonuclease H; ribonuclease H complement(868593..869036) Burkholderia cenocepacia AU 1054 4091557 YP_620688.1 CDS Bcen_0805 NC_008060.1 869033 869845 R PFAM: Methyltransferase type 11; KEGG: bur:Bcep18194_A4428 hypothetical protein; methyltransferase type 11 complement(869033..869845) Burkholderia cenocepacia AU 1054 4091558 YP_620689.1 CDS Bcen_0806 NC_008060.1 869864 870685 D PFAM: beta-lactamase-like; KEGG: bur:Bcep18194_A4429 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 869864..870685 Burkholderia cenocepacia AU 1054 4091559 YP_620690.1 CDS Bcen_0807 NC_008060.1 870837 872414 D PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N; KEGG: bur:Bcep18194_A4430 lytic transglycosylase like protein; lytic transglycosylase, catalytic 870837..872414 Burkholderia cenocepacia AU 1054 4091560 YP_620691.1 CDS Bcen_0808 NC_008060.1 872564 873781 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4431 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 872564..873781 Burkholderia cenocepacia AU 1054 4091561 YP_620692.1 CDS Bcen_0809 NC_008060.1 874151 875293 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 874151..875293 Burkholderia cenocepacia AU 1054 4091562 YP_620693.1 CDS Bcen_0810 NC_008060.1 875330 875989 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_A4433 lysine exporter family protein (LysE/YggA); leucine export protein LeuE 875330..875989 Burkholderia cenocepacia AU 1054 4091563 YP_620694.2 CDS carB NC_008060.1 876039 879293 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 876039..879293 Burkholderia cenocepacia AU 1054 4091564 YP_620695.1 CDS greA NC_008060.1 879412 879888 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 879412..879888 Burkholderia cenocepacia AU 1054 4091565 YP_620696.1 CDS Bcen_0813 NC_008060.1 879903 880361 D KEGG: bur:Bcep18194_A4436 hypothetical protein; hypothetical protein 879903..880361 Burkholderia cenocepacia AU 1054 4091566 YP_620697.1 CDS Bcen_0814 NC_008060.1 880430 880954 R PFAM: protein of unknown function UPF0044; KEGG: bur:Bcep18194_A4437 protein of unknown function UPF0044; hypothetical protein complement(880430..880954) Burkholderia cenocepacia AU 1054 4091567 YP_620698.1 CDS Bcen_0815 NC_008060.1 881148 881810 D PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bur:Bcep18194_A4438 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 881148..881810 Burkholderia cenocepacia AU 1054 4093259 YP_620699.1 CDS Bcen_0816 NC_008060.1 881989 883872 D KEGG: bur:Bcep18194_A4439 peptidase M41, FtsH TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; ATP-dependent metalloprotease FtsH 881989..883872 Burkholderia cenocepacia AU 1054 4093260 YP_620700.1 CDS Bcen_0817 NC_008060.1 883943 884842 D KEGG: bur:Bcep18194_A4440 dihydropteroate synthase TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase 883943..884842 Burkholderia cenocepacia AU 1054 4093261 YP_620701.1 CDS glmM NC_008060.1 884874 886229 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 884874..886229 Burkholderia cenocepacia AU 1054 4093262 YP_620702.1 CDS Bcen_0819 NC_008060.1 886682 887707 D TIGRFAM: Periplasmic phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: bpm:BURPS1710b_1618 phosphate ABC transporter, phosphate-binding protein; periplasmic phosphate binding protein 886682..887707 Burkholderia cenocepacia AU 1054 4093263 YP_620703.1 CDS pstC NC_008060.1 887802 888788 D part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 887802..888788 Burkholderia cenocepacia AU 1054 4093264 YP_620704.1 CDS pstA NC_008060.1 888785 889678 D Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 888785..889678 Burkholderia cenocepacia AU 1054 4093265 YP_620705.1 CDS pstB NC_008060.1 889694 890542 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 889694..890542 Burkholderia cenocepacia AU 1054 4093266 YP_620706.1 CDS Bcen_0823 NC_008060.1 890561 891265 D PFAM: PhoU; KEGG: bur:Bcep18194_A4447 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 890561..891265 Burkholderia cenocepacia AU 1054 4093267 YP_620707.1 CDS Bcen_0824 NC_008060.1 891295 891996 D TIGRFAM: Phosphate regulon transcriptional regulatory protein phoB; PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A4448 two component transcriptional regulator, winged helix family; two component transcriptional regulator 891295..891996 Burkholderia cenocepacia AU 1054 4093268 YP_620708.1 CDS Bcen_0825 NC_008060.1 892054 893373 D PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; SMART: PAS; KEGG: bur:Bcep18194_A4449 histidine kinase; PAS/PAC sensor signal transduction histidine kinase 892054..893373 Burkholderia cenocepacia AU 1054 4093269 YP_620709.1 CDS Bcen_0826 NC_008060.1 893426 895726 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(893426..895726) Burkholderia cenocepacia AU 1054 4093270 YP_620710.1 CDS Bcen_0827 NC_008060.1 895811 897325 D PFAM: Ppx/GppA phosphatase; KEGG: bur:Bcep18194_A4451 Ppx/GppA phosphatase; Ppx/GppA phosphatase 895811..897325 Burkholderia cenocepacia AU 1054 4093271 YP_620711.1 CDS Bcen_0828 NC_008060.1 897451 897888 R KEGG: bur:Bcep18194_A4452 hypothetical protein; hypothetical protein complement(897451..897888) Burkholderia cenocepacia AU 1054 4093272 YP_620712.1 CDS Bcen_0829 NC_008060.1 898347 898808 D TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: bur:Bcep18194_A4453 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase, SixA 898347..898808 Burkholderia cenocepacia AU 1054 4093274 YP_620713.1 CDS Bcen_0831 NC_008060.1 899990 900160 R KEGG: bur:Bcep18194_A4455 hypothetical protein; hypothetical protein complement(899990..900160) Burkholderia cenocepacia AU 1054 4093276 YP_620714.1 CDS Bcen_0832 NC_008060.1 900297 900479 D KEGG: bur:Bcep18194_A4456 hypothetical protein; hypothetical protein 900297..900479 Burkholderia cenocepacia AU 1054 4093807 YP_620715.1 CDS Bcen_0833 NC_008060.1 900499 901878 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bur:Bcep18194_A4457 multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(900499..901878) Burkholderia cenocepacia AU 1054 4093808 YP_620716.1 CDS Bcen_0834 NC_008060.1 901889 902239 R KEGG: bur:Bcep18194_A4458 uncharacterized small conserved protein; hypothetical protein complement(901889..902239) Burkholderia cenocepacia AU 1054 4093809 YP_620717.1 CDS Bcen_0835 NC_008060.1 902282 903901 R PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A4459 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(902282..903901) Burkholderia cenocepacia AU 1054 4093810 YP_620718.1 CDS Bcen_0836 NC_008060.1 904269 904970 R PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bur:Bcep18194_A4460 peptidase M23B; peptidase M23B complement(904269..904970) Burkholderia cenocepacia AU 1054 4093811 YP_620719.1 CDS Bcen_0837 NC_008060.1 905102 906013 R PFAM: Aldose 1-epimerase; KEGG: bur:Bcep18194_A4461 aldose 1-epimerase; aldose 1-epimerase complement(905102..906013) Burkholderia cenocepacia AU 1054 4093812 YP_620720.1 CDS Bcen_0838 NC_008060.1 906493 907323 D phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 906493..907323 Burkholderia cenocepacia AU 1054 4093813 YP_620721.1 CDS Bcen_0839 NC_008060.1 907644 908108 R PFAM: phage terminase, small subunit, , P27; KEGG: mbo:Mb1604c probable phiRv1 phage protein; phage terminase, small subunit, , P27 complement(907644..908108) Burkholderia cenocepacia AU 1054 4093815 YP_620722.1 CDS Bcen_0840 NC_008060.1 908374 909645 R PFAM: RelA/SpoT; KEGG: gsu:GSU2442 RelA/SpoT domain protein; RelA/SpoT complement(908374..909645) Burkholderia cenocepacia AU 1054 4093816 YP_620723.1 CDS Bcen_0841 NC_008060.1 910629 911324 R hypothetical protein complement(910629..911324) Burkholderia cenocepacia AU 1054 4093817 YP_620724.1 CDS Bcen_0842 NC_008060.1 911623 913203 R TIGRFAM: Phage-plasmid primase P4-like; PFAM: Poxvirus D5 protein; KEGG: bja:bll8257 hypothetical protein; hypothetical protein complement(911623..913203) Burkholderia cenocepacia AU 1054 4093818 YP_620725.1 CDS Bcen_0843 NC_008060.1 913200 913535 R SMART: Zinc finger, CHC2-type; KEGG: mag:amb1518 DNA primase; CHC2-family zinc finger protein complement(913200..913535) Burkholderia cenocepacia AU 1054 4093819 YP_620726.1 CDS Bcen_0844 NC_008060.1 913599 913826 R KEGG: cvi:CV3860 hypothetical protein; hypothetical protein complement(913599..913826) Burkholderia cenocepacia AU 1054 4093820 YP_620727.1 CDS Bcen_0845 NC_008060.1 914204 915577 R PFAM: phage integrase; KEGG: bte:BTH_I2717 phage integrase; phage integrase complement(914204..915577) Burkholderia cenocepacia AU 1054 4093821 YP_620728.1 CDS Bcen_0846 NC_008060.1 915849 917666 R TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase, class-II; sugar isomerase (SIS); KEGG: bur:Bcep18194_A4463 glucosamine-fructose-6-phosphate aminotransferase, isomerising; glucosamine--fructose-6-phosphate aminotransferase complement(915849..917666) Burkholderia cenocepacia AU 1054 4093822 YP_620729.1 CDS Bcen_0847 NC_008060.1 917716 918804 R KEGG: bur:Bcep18194_A4464 hypothetical protein; hypothetical protein complement(917716..918804) Burkholderia cenocepacia AU 1054 4093823 YP_620730.1 CDS Bcen_0848 NC_008060.1 918897 921035 R KEGG: bps:BPSS2011 outer membrane protein; outer membrane protein complement(918897..921035) Burkholderia cenocepacia AU 1054 4093824 YP_620731.1 CDS Bcen_0849 NC_008060.1 921370 922140 R KEGG: bte:BTH_II0345 hypothetical protein; hypothetical protein complement(921370..922140) Burkholderia cenocepacia AU 1054 4093825 YP_620732.1 CDS Bcen_0850 NC_008060.1 922154 923167 R KEGG: hypothetical protein; hypothetical protein complement(922154..923167) Burkholderia cenocepacia AU 1054 4093315 YP_620733.1 CDS Bcen_0851 NC_008060.1 923178 924173 R KEGG: bps:BPSS2014 hypothetical protein; hypothetical protein complement(923178..924173) Burkholderia cenocepacia AU 1054 4093316 YP_620734.1 CDS Bcen_0852 NC_008060.1 924177 925739 R PFAM: glycosyl transferase, family 2; KEGG: bte:BTH_II0342 glycosyl transferase, group 2 family protein; glycosyl transferase family protein complement(924177..925739) Burkholderia cenocepacia AU 1054 4093317 YP_620735.1 CDS Bcen_0853 NC_008060.1 926111 926584 D hypothetical protein 926111..926584 Burkholderia cenocepacia AU 1054 4093318 YP_620736.1 CDS Bcen_0854 NC_008060.1 926918 928135 D PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: bur:Bcep18194_A4466 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 926918..928135 Burkholderia cenocepacia AU 1054 4093319 YP_620737.1 CDS Bcen_0855 NC_008060.1 928217 928444 D hypothetical protein 928217..928444 Burkholderia cenocepacia AU 1054 4093320 YP_620738.1 CDS Bcen_0856 NC_008060.1 928543 929451 D PFAM: Alcohol dehydrogenase GroES-like; KEGG: son:SO2452 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase GroES-like protein 928543..929451 Burkholderia cenocepacia AU 1054 4093321 YP_620739.1 CDS Bcen_0857 NC_008060.1 929786 930247 D PFAM: ferredoxin; [2Fe-2S]-binding; KEGG: bur:Bcep18194_A4470 ferredoxin/oxidoreductase; (2Fe-2S)-binding protein 929786..930247 Burkholderia cenocepacia AU 1054 4093322 YP_620740.1 CDS Bcen_0858 NC_008060.1 930244 932568 D TIGRFAM: Twin-arginine translocation pathway signal; PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bur:Bcep18194_A4471 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; twin-arginine translocation pathway signal 930244..932568 Burkholderia cenocepacia AU 1054 4093323 YP_620741.1 CDS Bcen_0859 NC_008060.1 932641 933408 D PFAM: class II aldolase/adducin-like; KEGG: bur:Bcep18194_A4472 class II aldolase/adducin-like; aldolase II superfamily protein 932641..933408 Burkholderia cenocepacia AU 1054 4093324 YP_620742.1 CDS Bcen_0860 NC_008060.1 933518 935347 D PFAM: acyl-CoA dehydrogenase-like; KEGG: bur:Bcep18194_A4473 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 933518..935347 Burkholderia cenocepacia AU 1054 4093325 YP_620743.1 CDS Bcen_0861 NC_008060.1 935489 936469 D PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_A4474 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase 935489..936469 Burkholderia cenocepacia AU 1054 4093326 YP_620744.1 CDS Bcen_0862 NC_008060.1 936630 937238 R PFAM: transcriptional regulator PadR-like; KEGG: bur:Bcep18194_A4476 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator complement(936630..937238) Burkholderia cenocepacia AU 1054 4093327 YP_620745.1 CDS Bcen_0863 NC_008060.1 937348 939372 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A4477 NADH-flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 937348..939372 Burkholderia cenocepacia AU 1054 4093328 YP_620746.1 CDS Bcen_0864 NC_008060.1 939420 939860 D KEGG: bur:Bcep18194_A4478 hypothetical protein; hypothetical protein 939420..939860 Burkholderia cenocepacia AU 1054 4093329 YP_620747.1 CDS Bcen_0865 NC_008060.1 939873 940232 R hypothetical protein complement(939873..940232) Burkholderia cenocepacia AU 1054 4093330 YP_620748.1 CDS Bcen_0866 NC_008060.1 940288 942378 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bur:Bcep18194_A4489 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 940288..942378 Burkholderia cenocepacia AU 1054 4093331 YP_620749.1 CDS Bcen_0867 NC_008060.1 942390 943175 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4490 ABC transporter, ATPase subunit; ABC transporter 942390..943175 Burkholderia cenocepacia AU 1054 4093332 YP_620750.1 CDS Bcen_0868 NC_008060.1 943172 944164 D PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_A4491 ABC Fe3+ siderophore transporter, periplasmic ligand binding protein; periplasmic binding protein 943172..944164 Burkholderia cenocepacia AU 1054 4093333 YP_620751.1 CDS Bcen_0869 NC_008060.1 944161 945201 D PFAM: ABC transporter permease; KEGG: bur:Bcep18194_A4492 ABC Fe3+ siderophore transporter, inner membrane subunit; ABC transporter permease 944161..945201 Burkholderia cenocepacia AU 1054 4092289 YP_620752.1 CDS Bcen_0870 NC_008060.1 945214 946623 R PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; KEGG: bur:Bcep18194_A4493 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase complement(945214..946623) Burkholderia cenocepacia AU 1054 4092290 YP_620753.1 CDS Bcen_0871 NC_008060.1 946624 947349 R PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A4494 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(946624..947349) Burkholderia cenocepacia AU 1054 4092291 YP_620754.1 CDS Bcen_0872 NC_008060.1 947475 948341 D PFAM: MltA-interacting MipA; KEGG: bur:Bcep18194_A4495 MltA-interacting MipA; MltA-interacting MipA 947475..948341 Burkholderia cenocepacia AU 1054 4092292 YP_620755.1 CDS Bcen_0873 NC_008060.1 948473 950272 R PFAM: Lytic transglycosylase, catalytic; KEGG: bur:Bcep18194_A4498 lytic transglycosylase, catalytic; lytic transglycosylase, catalytic complement(948473..950272) Burkholderia cenocepacia AU 1054 4092293 YP_620756.1 CDS Bcen_0874 NC_008060.1 950372 950713 D hypothetical protein 950372..950713 Burkholderia cenocepacia AU 1054 4092294 YP_620757.1 CDS Bcen_0875 NC_008060.1 950685 951845 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_A4500 outer membrane protein, (porin); porin complement(950685..951845) Burkholderia cenocepacia AU 1054 4092295 YP_620758.1 CDS Bcen_0876 NC_008060.1 952013 952315 D hypothetical protein 952013..952315 Burkholderia cenocepacia AU 1054 4092296 YP_620759.1 CDS Bcen_0877 NC_008060.1 952340 952849 D PFAM: sigma-70 region 2; sigma-70 region 4; Sigma-70, region 4 type 2; KEGG: bur:Bcep18194_A4502 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 952340..952849 Burkholderia cenocepacia AU 1054 4092297 YP_620760.1 CDS Bcen_0878 NC_008060.1 952853 953845 D PFAM: FecR protein; KEGG: bur:Bcep18194_A4503 FecR; FecR protein 952853..953845 Burkholderia cenocepacia AU 1054 4092298 YP_620761.1 CDS Bcen_0879 NC_008060.1 953900 956467 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB, short N-terminal; TonB-dependent receptor, plug; KEGG: bur:Bcep18194_A4504 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 953900..956467 Burkholderia cenocepacia AU 1054 4092299 YP_620762.1 CDS Bcen_0880 NC_008060.1 956470 957273 D KEGG: bur:Bcep18194_A4505 hypothetical protein; hypothetical protein 956470..957273 Burkholderia cenocepacia AU 1054 4092300 YP_620763.1 CDS Bcen_0881 NC_008060.1 957289 958179 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4506 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(957289..958179) Burkholderia cenocepacia AU 1054 4092301 YP_620764.1 CDS Bcen_0882 NC_008060.1 958292 958717 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A4507 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 958292..958717 Burkholderia cenocepacia AU 1054 4092302 YP_620765.1 CDS Bcen_0883 NC_008060.1 958850 959440 D PFAM: flavin reductase-like, FMN-binding; KEGG: bur:Bcep18194_A4508 flavin reductase-like, FMN-binding; flavin reductase-like, FMN-binding 958850..959440 Burkholderia cenocepacia AU 1054 4092303 YP_620766.1 CDS Bcen_0884 NC_008060.1 959478 960374 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4509 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(959478..960374) Burkholderia cenocepacia AU 1054 4092304 YP_620767.1 CDS Bcen_0885 NC_008060.1 960472 961770 D TIGRFAM: citrate transporter; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; KEGG: bur:Bcep18194_A4510 citrate transporter; citrate transporter 960472..961770 Burkholderia cenocepacia AU 1054 4092305 YP_620768.1 CDS Bcen_0886 NC_008060.1 961783 963168 D PFAM: protein of unknown function DUF1446; KEGG: bur:Bcep18194_A4511 protein of unknown function DUF1446; hypothetical protein 961783..963168 Burkholderia cenocepacia AU 1054 4092306 YP_620769.1 CDS Bcen_0887 NC_008060.1 963168 963479 D KEGG: bur:Bcep18194_A4512 hypothetical protein; hypothetical protein 963168..963479 Burkholderia cenocepacia AU 1054 4092307 YP_620770.1 CDS Bcen_0888 NC_008060.1 963858 964538 D KEGG: bur:Bcep18194_A4515 hypothetical protein; hypothetical protein 963858..964538 Burkholderia cenocepacia AU 1054 4092308 YP_620771.1 CDS Bcen_0889 NC_008060.1 964590 965393 D KEGG: bur:Bcep18194_A4516 hypothetical protein; hypothetical protein 964590..965393 Burkholderia cenocepacia AU 1054 4092366 YP_620772.1 CDS Bcen_0890 NC_008060.1 965434 966363 R PFAM: phosphatidate cytidylyltransferase; KEGG: bur:Bcep18194_A4517 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(965434..966363) Burkholderia cenocepacia AU 1054 4092367 YP_620773.1 CDS Bcen_0891 NC_008060.1 966402 967034 R PFAM: phospholipid/glycerol acyltransferase; KEGG: bur:Bcep18194_A4518 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(966402..967034) Burkholderia cenocepacia AU 1054 4092368 YP_620774.1 CDS Bcen_0892 NC_008060.1 967503 968108 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bur:Bcep18194_A4519 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 967503..968108 Burkholderia cenocepacia AU 1054 4092369 YP_620775.1 CDS Bcen_0893 NC_008060.1 968168 969937 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A4520 alpha/beta hydrolase; alpha/beta hydrolase 968168..969937 Burkholderia cenocepacia AU 1054 4092370 YP_620776.1 CDS Bcen_0894 NC_008060.1 969934 971349 D PFAM: Dual specificity protein phosphatase; KEGG: bur:Bcep18194_A4521 dual specificity protein phosphatase; dual specificity protein phosphatase 969934..971349 Burkholderia cenocepacia AU 1054 4092371 YP_620777.1 CDS Bcen_0895 NC_008060.1 971349 971801 D KEGG: bur:Bcep18194_A4522 hypothetical protein; hypothetical protein 971349..971801 Burkholderia cenocepacia AU 1054 4092372 YP_620778.1 CDS Bcen_0896 NC_008060.1 971856 973049 R TIGRFAM: GGDEF domain; PFAM: GGDEF; GAF; KEGG: bur:Bcep18194_A4523 diguanylate cyclase (GGDEF domain); GAF sensor-containing diguanylate cyclase complement(971856..973049) Burkholderia cenocepacia AU 1054 4092373 YP_620779.1 CDS Bcen_0897 NC_008060.1 973349 975694 D binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 973349..975694 Burkholderia cenocepacia AU 1054 4092374 YP_620780.1 CDS Bcen_0898 NC_008060.1 975698 976927 D catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase 975698..976927 Burkholderia cenocepacia AU 1054 4092375 YP_620781.1 CDS Bcen_0899 NC_008060.1 976912 980805 D PFAM: cellulose synthase operon C-like; Tetratricopeptide TPR_4; SMART: Tetratricopeptide region; KEGG: bur:Bcep18194_A4527 cellulose synthase operon C-like protein; cellulose synthase operon C-like 976912..980805 Burkholderia cenocepacia AU 1054 4092376 YP_620782.1 CDS Bcen_0900 NC_008060.1 980815 982785 D KEGG: bur:Bcep18194_A4528 hypothetical protein; hypothetical protein 980815..982785 Burkholderia cenocepacia AU 1054 4092377 YP_620783.1 CDS Bcen_0901 NC_008060.1 982782 983018 D KEGG: bte:BTH_II0795 hypothetical protein; hypothetical protein 982782..983018 Burkholderia cenocepacia AU 1054 4092378 YP_620784.1 CDS Bcen_0902 NC_008060.1 983015 983794 D KEGG: bur:Bcep18194_A4529 ATPases involved in chromosome partitioning-like; chromosome partitioning ATPase protein-like 983015..983794 Burkholderia cenocepacia AU 1054 4092379 YP_620785.1 CDS Bcen_0903 NC_008060.1 983791 986328 D PFAM: glycosyl transferase, family 2; type IV pilus assembly PilZ; KEGG: bur:Bcep18194_A4530 cellulose synthase (UDP-forming); cellulose synthase 983791..986328 Burkholderia cenocepacia AU 1054 4092380 YP_620786.1 CDS Bcen_0904 NC_008060.1 986356 987912 D KEGG: bur:Bcep18194_A4531 hypothetical protein; hypothetical protein 986356..987912 Burkholderia cenocepacia AU 1054 4092381 YP_620787.1 CDS Bcen_0905 NC_008060.1 987909 988091 D KEGG: hypothetical protein; hypothetical protein 987909..988091 Burkholderia cenocepacia AU 1054 4092382 YP_620788.1 CDS Bcen_0906 NC_008060.1 988555 989310 D KEGG: bur:Bcep18194_C6807 hypothetical protein; hypothetical protein 988555..989310 Burkholderia cenocepacia AU 1054 4092383 YP_620789.1 CDS Bcen_0907 NC_008060.1 989354 990235 R PFAM: Pirin-like; KEGG: bur:Bcep18194_A4532 pirin-like protein; Pirin-like protein complement(989354..990235) Burkholderia cenocepacia AU 1054 4092384 YP_620790.1 CDS Bcen_0908 NC_008060.1 990285 990677 R PFAM: OsmC-like protein; KEGG: bur:Bcep18194_A4533 OsmC-like protein; OsmC-like protein complement(990285..990677) Burkholderia cenocepacia AU 1054 4092739 YP_620791.1 CDS Bcen_0909 NC_008060.1 990723 992303 R PFAM: sodium/hydrogen exchanger; KEGG: bur:Bcep18194_A4534 Na+/H+ antiporter; sodium/hydrogen exchanger complement(990723..992303) Burkholderia cenocepacia AU 1054 4092740 YP_620792.1 CDS Bcen_0910 NC_008060.1 992329 992589 R PFAM: protein of unknown function DUF1427; KEGG: bur:Bcep18194_A4535 hypothetical protein; hypothetical protein complement(992329..992589) Burkholderia cenocepacia AU 1054 4092741 YP_620793.1 CDS Bcen_0911 NC_008060.1 992867 993553 D PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_A4536 isochorismatase hydrolase; isochorismatase hydrolase 992867..993553 Burkholderia cenocepacia AU 1054 4092742 YP_620794.1 CDS Bcen_0912 NC_008060.1 993627 994559 R PFAM: regulatory protein, LysR; helix-turn-helix, Fis-type; LysR, substrate-binding; KEGG: bur:Bcep18194_A4537 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(993627..994559) Burkholderia cenocepacia AU 1054 4092743 YP_620795.1 CDS Bcen_0913 NC_008060.1 994649 994816 D KEGG: bur:Bcep18194_A4538 hypothetical protein; hypothetical protein 994649..994816 Burkholderia cenocepacia AU 1054 4092744 YP_620796.1 CDS Bcen_0914 NC_008060.1 994834 996723 D PFAM: Amidohydrolase 3; KEGG: bur:Bcep18194_A4539 metal-dependent hydrolase; amidohydrolase 3 994834..996723 Burkholderia cenocepacia AU 1054 4092745 YP_620797.1 CDS Bcen_0915 NC_008060.1 996725 997177 D PFAM: DoxX; KEGG: bur:Bcep18194_A4540 membrane protein, DoxX; DoxX protein 996725..997177 Burkholderia cenocepacia AU 1054 4092746 YP_620798.1 CDS Bcen_0916 NC_008060.1 997204 998118 D KEGG: bur:Bcep18194_A4541 hypothetical protein; hypothetical protein 997204..998118 Burkholderia cenocepacia AU 1054 4092747 YP_620799.1 CDS Bcen_0917 NC_008060.1 998115 998813 D PFAM: protein of unknown function DUF1275; KEGG: bur:Bcep18194_A4542 protein of unknown function DUF1275; hypothetical protein 998115..998813 Burkholderia cenocepacia AU 1054 4092748 YP_620800.1 CDS Bcen_0918 NC_008060.1 998810 1000348 D KEGG: bur:Bcep18194_A4543 hypothetical protein; hypothetical protein 998810..1000348 Burkholderia cenocepacia AU 1054 4092749 YP_620801.1 CDS Bcen_0919 NC_008060.1 1000462 1002144 R PFAM: phosphoesterase; KEGG: bur:Bcep18194_A4545 phosphoesterase; phosphoesterase complement(1000462..1002144) Burkholderia cenocepacia AU 1054 4092750 YP_620802.1 CDS Bcen_0920 NC_008060.1 1002269 1003618 D PFAM: Di-haem cytochrome c peroxidase; KEGG: bur:Bcep18194_A4546 di-haem cytochrome c peroxidase; di-heme cytochrome c peroxidase 1002269..1003618 Burkholderia cenocepacia AU 1054 4092751 YP_620803.1 CDS Bcen_0921 NC_008060.1 1003726 1004112 D KEGG: bur:Bcep18194_A4547 hypothetical protein; hypothetical protein 1003726..1004112 Burkholderia cenocepacia AU 1054 4092752 YP_620804.1 CDS Bcen_0922 NC_008060.1 1004124 1004594 D PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4548 NUDIX hydrolase; NUDIX hydrolase 1004124..1004594 Burkholderia cenocepacia AU 1054 4092753 YP_620805.1 CDS Bcen_0923 NC_008060.1 1004733 1006442 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(1004733..1006442) Burkholderia cenocepacia AU 1054 4092754 YP_620806.1 CDS Bcen_0924 NC_008060.1 1006631 1006906 D KEGG: bur:Bcep18194_A4550 hypothetical protein; hypothetical protein 1006631..1006906 Burkholderia cenocepacia AU 1054 4092755 YP_620807.1 CDS Bcen_0925 NC_008060.1 1007102 1007650 D PFAM: protein of unknown function DUF1234; KEGG: bur:Bcep18194_A4551 protein of unknown function DUF1234; hypothetical protein 1007102..1007650 Burkholderia cenocepacia AU 1054 4092756 YP_620808.1 CDS Bcen_0926 NC_008060.1 1007746 1008966 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A4552 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(1007746..1008966) Burkholderia cenocepacia AU 1054 4092757 YP_620809.1 CDS alaS NC_008060.1 1009152 1011845 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1009152..1011845 Burkholderia cenocepacia AU 1054 4092758 YP_620810.1 CDS Bcen_0928 NC_008060.1 1011993 1012907 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4554 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1011993..1012907) Burkholderia cenocepacia AU 1054 4093749 YP_620811.1 CDS Bcen_0929 NC_008060.1 1013031 1014293 D PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4555 hypothetical protein; hypothetical protein 1013031..1014293 Burkholderia cenocepacia AU 1054 4093750 YP_620812.1 CDS Bcen_0930 NC_008060.1 1014416 1014952 D PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4556 NUDIX hydrolase; NUDIX hydrolase 1014416..1014952 Burkholderia cenocepacia AU 1054 4093751 YP_620813.1 CDS Bcen_0931 NC_008060.1 1015105 1015542 D PFAM: thioesterase superfamily; KEGG: bur:Bcep18194_A4557 thioesterase superfamily; thioesterase 1015105..1015542 Burkholderia cenocepacia AU 1054 4093752 YP_620814.1 CDS Bcen_0932 NC_008060.1 1015552 1016487 D PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4558 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator 1015552..1016487 Burkholderia cenocepacia AU 1054 4093753 YP_620815.1 CDS Bcen_0933 NC_008060.1 1016480 1017709 D PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4559 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator 1016480..1017709 Burkholderia cenocepacia AU 1054 4093754 YP_620816.1 CDS Bcen_0934 NC_008060.1 1017706 1018458 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4560 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter 1017706..1018458 Burkholderia cenocepacia AU 1054 4093755 YP_620817.1 CDS Bcen_0935 NC_008060.1 1018455 1019159 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4561 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter 1018455..1019159 Burkholderia cenocepacia AU 1054 4093756 YP_620818.1 CDS Bcen_0936 NC_008060.1 1019344 1020090 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A4562 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1019344..1020090 Burkholderia cenocepacia AU 1054 4093757 YP_620819.1 CDS Bcen_0937 NC_008060.1 1020137 1020631 R PFAM: protein of unknown function DUF336; KEGG: bur:Bcep18194_A4563 protein of unknown function DUF336; hypothetical protein complement(1020137..1020631) Burkholderia cenocepacia AU 1054 4093758 YP_620820.1 CDS Bcen_0938 NC_008060.1 1020757 1021575 R PFAM: Myo-inositol catabolism IolB region; KEGG: bur:Bcep18194_A4564 myo-inositol catabolism IolB region; myo-inositol catabolism IolB region complement(1020757..1021575) Burkholderia cenocepacia AU 1054 4093759 YP_620821.1 CDS Bcen_0939 NC_008060.1 1021632 1022561 R PFAM: Xylose isomerase-like TIM barrel; KEGG: bur:Bcep18194_A4565 xylose isomerase; xylose isomerase complement(1021632..1022561) Burkholderia cenocepacia AU 1054 4093760 YP_620822.1 CDS Bcen_0940 NC_008060.1 1022622 1024505 R PFAM: thiamine pyrophosphate enzyme-like TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme-like TPP binding region; KEGG: bur:Bcep18194_A4566 acetolactate synthase; thiamine pyrophosphate enzyme-like protein complement(1022622..1024505) Burkholderia cenocepacia AU 1054 4093761 YP_620823.1 CDS Bcen_0941 NC_008060.1 1024552 1026507 R PFAM: PfkB; KEGG: bur:Bcep18194_A4567 PfkB family carbohydrate kinase; PfkB protein complement(1024552..1026507) Burkholderia cenocepacia AU 1054 4093762 YP_620824.1 CDS Bcen_0942 NC_008060.1 1026824 1027750 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4568 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator 1026824..1027750 Burkholderia cenocepacia AU 1054 4093763 YP_620825.1 CDS Bcen_0943 NC_008060.1 1027819 1029393 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4569 ABC sugar transporter, ATPase subunit; ABC transporter 1027819..1029393 Burkholderia cenocepacia AU 1054 4093764 YP_620826.1 CDS Bcen_0944 NC_008060.1 1029421 1030446 D PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4570 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 1029421..1030446 Burkholderia cenocepacia AU 1054 4093765 YP_620827.1 CDS Bcen_0945 NC_008060.1 1030490 1031401 D PFAM: Xylose isomerase-like TIM barrel; KEGG: bur:Bcep18194_A4571 xylose isomerase; xylose isomerase 1030490..1031401 Burkholderia cenocepacia AU 1054 4093766 YP_620828.1 CDS Bcen_0946 NC_008060.1 1031472 1032485 D PFAM: oxidoreductase-like; Oxidoreductase-like; KEGG: bur:Bcep18194_A4572 myo-inositol 2-dehydrogenase; myo-inositol 2-dehydrogenase 1031472..1032485 Burkholderia cenocepacia AU 1054 4093767 YP_620829.1 CDS Bcen_0947 NC_008060.1 1032515 1033441 D PFAM: Xylose isomerase-like TIM barrel; KEGG: bur:Bcep18194_A4573 xylose isomerase; xylose isomerase 1032515..1033441 Burkholderia cenocepacia AU 1054 4092893 YP_620830.1 CDS Bcen_0948 NC_008060.1 1033474 1034646 D PFAM: oxidoreductase-like; Oxidoreductase-like; KEGG: bur:Bcep18194_A4574 oxidoreductase-like; oxidoreductase-like 1033474..1034646 Burkholderia cenocepacia AU 1054 4092894 YP_620831.1 CDS Bcen_0949 NC_008060.1 1034845 1035804 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_A4575 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 1034845..1035804 Burkholderia cenocepacia AU 1054 4092895 YP_620832.1 CDS Bcen_0950 NC_008060.1 1035862 1037382 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_A4576 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(1035862..1037382) Burkholderia cenocepacia AU 1054 4092896 YP_620833.1 CDS Bcen_0951 NC_008060.1 1037492 1038427 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4577 transcriptional regulator, LysR family; LysR family transcriptional regulator 1037492..1038427 Burkholderia cenocepacia AU 1054 4092897 YP_620834.1 CDS Bcen_0952 NC_008060.1 1038551 1038778 D PFAM: SirA-like; KEGG: bur:Bcep18194_A4578 SirA-like protein; SirA-like protein 1038551..1038778 Burkholderia cenocepacia AU 1054 4092898 YP_620835.1 CDS Bcen_0953 NC_008060.1 1039064 1039498 D KEGG: bur:Bcep18194_A4579 hypothetical protein; hypothetical protein 1039064..1039498 Burkholderia cenocepacia AU 1054 4092899 YP_620836.1 CDS Bcen_0954 NC_008060.1 1039579 1040469 D PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A4580 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1039579..1040469 Burkholderia cenocepacia AU 1054 4092900 YP_620837.1 CDS Bcen_0955 NC_008060.1 1040466 1041827 D PFAM: Peptidoglycan-binding LysM; KEGG: bur:Bcep18194_A4581 peptidoglycan-binding LysM; peptidoglycan-binding LysM 1040466..1041827 Burkholderia cenocepacia AU 1054 4092901 YP_620838.1 CDS Bcen_0956 NC_008060.1 1041838 1044225 D PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; CHASE2; KEGG: bur:Bcep18194_A4582 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase 1041838..1044225 Burkholderia cenocepacia AU 1054 4092902 YP_620839.1 CDS Bcen_0957 NC_008060.1 1044263 1044877 D KEGG: bur:Bcep18194_A4583 hypothetical protein; hypothetical protein 1044263..1044877 Burkholderia cenocepacia AU 1054 4092903 YP_620840.1 CDS Bcen_0958 NC_008060.1 1044930 1045814 R TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bur:Bcep18194_A4584 UTP--glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase complement(1044930..1045814) Burkholderia cenocepacia AU 1054 4092904 YP_620841.1 CDS valS NC_008060.1 1045902 1048769 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(1045902..1048769) Burkholderia cenocepacia AU 1054 4092905 YP_620842.1 CDS Bcen_0960 NC_008060.1 1048828 1051368 D PFAM: UvrD/REP helicase; KEGG: bur:Bcep18194_A4586 UvrD/REP helicase; UvrD/REP helicase 1048828..1051368 Burkholderia cenocepacia AU 1054 4092906 YP_620843.1 CDS Bcen_0961 NC_008060.1 1051368 1052162 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1051368..1052162 Burkholderia cenocepacia AU 1054 4092907 YP_620844.1 CDS Bcen_0962 NC_008060.1 1052235 1053473 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4588 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1052235..1053473) Burkholderia cenocepacia AU 1054 4092908 YP_620845.1 CDS Bcen_0963 NC_008060.1 1053879 1055552 D PFAM: chemotaxis sensory transducer; KEGG: bur:Bcep18194_A4589 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1053879..1055552 Burkholderia cenocepacia AU 1054 4092909 YP_620846.1 CDS Bcen_0964 NC_008060.1 1055574 1056449 R PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_A4591 secretion protein HlyD family; secretion protein HlyD complement(1055574..1056449) Burkholderia cenocepacia AU 1054 4092910 YP_620847.1 CDS Bcen_0965 NC_008060.1 1056462 1056665 R PFAM: protein of unknown function DUF1656; KEGG: bur:Bcep18194_A4592 protein of unknown function DUF1656; hypothetical protein complement(1056462..1056665) Burkholderia cenocepacia AU 1054 4092911 YP_620848.1 CDS Bcen_0966 NC_008060.1 1056662 1058866 R PFAM: Fusaric acid resistance protein conserved region; KEGG: bur:Bcep18194_A4593 fusaric acid resistance protein; fusaric acid resistance protein region complement(1056662..1058866) Burkholderia cenocepacia AU 1054 4092912 YP_620849.1 CDS Bcen_0967 NC_008060.1 1058881 1060458 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A4594 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT complement(1058881..1060458) Burkholderia cenocepacia AU 1054 4090911 YP_620850.1 CDS Bcen_0968 NC_008060.1 1060616 1061557 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4595 transcriptional regulator, LysR family; LysR family transcriptional regulator 1060616..1061557 Burkholderia cenocepacia AU 1054 4090912 YP_620851.1 CDS Bcen_0969 NC_008060.1 1061609 1061839 R KEGG: bur:Bcep18194_A4596 hypothetical protein; hypothetical protein complement(1061609..1061839) Burkholderia cenocepacia AU 1054 4090913 YP_620852.1 CDS Bcen_0970 NC_008060.1 1061886 1062716 R PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_A4597 metallophosphoesterase; metallophosphoesterase complement(1061886..1062716) Burkholderia cenocepacia AU 1054 4090914 YP_620853.1 CDS Bcen_0971 NC_008060.1 1062742 1064163 R PFAM: FAD linked oxidase-like; KEGG: bur:Bcep18194_A4598 FAD linked oxidase-like; FAD linked oxidase-like protein complement(1062742..1064163) Burkholderia cenocepacia AU 1054 4090915 YP_620854.1 CDS Bcen_0972 NC_008060.1 1064182 1064574 R KEGG: bur:Bcep18194_A4599 membrane protein; membrane protein complement(1064182..1064574) Burkholderia cenocepacia AU 1054 4090916 YP_620855.1 CDS Bcen_0973 NC_008060.1 1064571 1065191 R PFAM: flavodoxin/nitric oxide synthase; KEGG: bur:Bcep18194_A4600 flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase complement(1064571..1065191) Burkholderia cenocepacia AU 1054 4090917 YP_620856.1 CDS Bcen_0974 NC_008060.1 1065337 1066665 D TIGRFAM: ribonuclease BN, ; PFAM: ribonuclease BN; KEGG: bur:Bcep18194_A4601 ribonuclease BN; ribonuclease BN 1065337..1066665 Burkholderia cenocepacia AU 1054 4090918 YP_620857.1 CDS Bcen_0975 NC_008060.1 1066681 1066998 R KEGG: bur:Bcep18194_A4602 membrane protein; membrane protein complement(1066681..1066998) Burkholderia cenocepacia AU 1054 4090919 YP_620858.1 CDS Bcen_0976 NC_008060.1 1067156 1067611 D PFAM: CBS; KEGG: bur:Bcep18194_A4603 transcriptional regulator, XRE family; XRE family transcriptional regulator 1067156..1067611 Burkholderia cenocepacia AU 1054 4090920 YP_620859.1 CDS Bcen_0977 NC_008060.1 1067751 1069685 D PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4604 major facilitator superfamily (MFS_1) transporter and phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 1067751..1069685 Burkholderia cenocepacia AU 1054 4090921 YP_620860.1 CDS Bcen_0978 NC_008060.1 1069934 1071034 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1069934..1071034 Burkholderia cenocepacia AU 1054 4090922 YP_620861.1 CDS Bcen_0979 NC_008060.1 1071183 1072856 R PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: bur:Bcep18194_A4606 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase complement(1071183..1072856) Burkholderia cenocepacia AU 1054 4090923 YP_620862.1 CDS Bcen_0980 NC_008060.1 1073036 1073818 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A4607 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 1073036..1073818 Burkholderia cenocepacia AU 1054 4090924 YP_620863.1 CDS Bcen_0981 NC_008060.1 1073851 1074291 D PFAM: thioesterase superfamily; KEGG: bur:Bcep18194_A4608 thioesterase superfamily; thioesterase 1073851..1074291 Burkholderia cenocepacia AU 1054 4090925 YP_620864.1 CDS Bcen_0982 NC_008060.1 1074409 1075095 R PFAM: regulatory protein, LuxR; PAS fold-4; SMART: PAS; KEGG: bur:Bcep18194_A4609 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(1074409..1075095) Burkholderia cenocepacia AU 1054 4090926 YP_620865.1 CDS Bcen_0983 NC_008060.1 1075175 1075879 D KEGG: bur:Bcep18194_A4610 3-oxoacid CoA-transferase TIGRFAM: 3-oxoacid CoA-transferase, subunit A; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 1075175..1075879 Burkholderia cenocepacia AU 1054 4090927 YP_620866.1 CDS Bcen_0984 NC_008060.1 1075881 1076522 D KEGG: bur:Bcep18194_A4611 3-oxoacid CoA-transferase TIGRFAM: 3-oxoacid CoA-transferase, subunit B; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 1075881..1076522 Burkholderia cenocepacia AU 1054 4090928 YP_620867.1 CDS Bcen_0985 NC_008060.1 1076601 1077314 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bps:BPSL1953 short chain dehydrogenase; short chain dehydrogenase complement(1076601..1077314) Burkholderia cenocepacia AU 1054 4090929 YP_620868.1 CDS Bcen_0986 NC_008060.1 1077353 1078363 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: polysaccharide deacetylase; KEGG: bte:BTH_I2605 polysaccharide deacetylase family protein; twin-arginine translocation pathway signal complement(1077353..1078363) Burkholderia cenocepacia AU 1054 4092142 YP_620869.1 CDS Bcen_0987 NC_008060.1 1078375 1078932 R PFAM: protein of unknown function DUF1486; KEGG: bte:BTH_I2604 hypothetical protein; hypothetical protein complement(1078375..1078932) Burkholderia cenocepacia AU 1054 4092143 YP_620870.1 CDS Bcen_0988 NC_008060.1 1079068 1079976 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bte:BTH_I2603 transcriptional regulator, LysR family; LysR family transcriptional regulator 1079068..1079976 Burkholderia cenocepacia AU 1054 4092144 YP_620871.1 CDS Bcen_0989 NC_008060.1 1080102 1080998 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A4612 alpha/beta hydrolase; alpha/beta hydrolase 1080102..1080998 Burkholderia cenocepacia AU 1054 4092145 YP_620872.1 CDS Bcen_0990 NC_008060.1 1081079 1081432 D PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_A4613 endoribonuclease L-PSP; endoribonuclease L-PSP 1081079..1081432 Burkholderia cenocepacia AU 1054 4092146 YP_620873.1 CDS Bcen_0991 NC_008060.1 1081472 1083709 D KEGG: bur:Bcep18194_A4614 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT; TGS; RelA/SpoT; (p)ppGpp synthetase I SpoT/RelA 1081472..1083709 Burkholderia cenocepacia AU 1054 4092147 YP_620874.1 CDS Bcen_0992 NC_008060.1 1083904 1084197 D hypothetical protein 1083904..1084197 Burkholderia cenocepacia AU 1054 4092149 YP_620875.2 CDS thrS NC_008060.1 1084143 1086050 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1084143..1086050 Burkholderia cenocepacia AU 1054 4092150 YP_620876.1 CDS Bcen_0994 NC_008060.1 1086154 1086624 D TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: bur:Bcep18194_A4616 initiation factor 3; translation initiation factor IF-3 1086154..1086624 Burkholderia cenocepacia AU 1054 4092151 YP_620877.1 CDS rpmI NC_008060.1 1086815 1087012 D PFAM: ribosomal protein L35; KEGG: bur:Bcep18194_A4617 ribosomal protein L35; 50S ribosomal protein L35 1086815..1087012 Burkholderia cenocepacia AU 1054 4092152 YP_620878.1 CDS rplT NC_008060.1 1087043 1087402 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1087043..1087402 Burkholderia cenocepacia AU 1054 4092153 YP_620879.2 CDS pheS NC_008060.1 1087542 1088564 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1087542..1088564 Burkholderia cenocepacia AU 1054 4092154 YP_620880.1 CDS pheT NC_008060.1 1088663 1091092 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1088663..1091092 Burkholderia cenocepacia AU 1054 4092155 YP_620881.1 CDS ihfA NC_008060.1 1091156 1091551 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1091156..1091551 Burkholderia cenocepacia AU 1054 4092156 YP_620882.1 CDS Bcen_1000 NC_008060.1 1091609 1092022 D PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_A4622 transcriptional regulator, MerR family; MerR family transcriptional regulator 1091609..1092022 Burkholderia cenocepacia AU 1054 4092157 YP_620883.1 CDS Bcen_1001 NC_008060.1 1092117 1094327 R PFAM: protein of unknown function DUF811; KEGG: bur:Bcep18194_A4623 hypothetical protein; hypothetical protein complement(1092117..1094327) Burkholderia cenocepacia AU 1054 4092158 YP_620884.1 CDS Bcen_1002 NC_008060.1 1094416 1094628 R hypothetical protein complement(1094416..1094628) Burkholderia cenocepacia AU 1054 4092159 YP_620885.1 CDS Bcen_1003 NC_008060.1 1094720 1095433 D KEGG: bur:Bcep18194_A4625 hypothetical protein; hypothetical protein 1094720..1095433 Burkholderia cenocepacia AU 1054 4092160 YP_620886.1 CDS Bcen_1004 NC_008060.1 1095781 1096989 D KEGG: bur:Bcep18194_A4626 uncharacterized lipoprotein-like; hypothetical protein 1095781..1096989 Burkholderia cenocepacia AU 1054 4093298 YP_620887.1 CDS Bcen_1006 NC_008060.1 1097524 1097814 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bur:Bcep18194_A4628 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1097524..1097814 Burkholderia cenocepacia AU 1054 4093300 YP_620888.1 CDS Bcen_1007 NC_008060.1 1097862 1098119 R KEGG: bte:BTH_I2576 hypothetical protein; hypothetical protein complement(1097862..1098119) Burkholderia cenocepacia AU 1054 4093301 YP_620889.1 CDS Bcen_1008 NC_008060.1 1098256 1098531 R KEGG: bur:Bcep18194_A4630 hypothetical protein; hypothetical protein complement(1098256..1098531) Burkholderia cenocepacia AU 1054 4093302 YP_620890.1 CDS Bcen_1009 NC_008060.1 1098753 1099427 R PFAM: protein of unknown function DUF218; KEGG: bur:Bcep18194_A4631 protein of unknown function DUF218; hypothetical protein complement(1098753..1099427) Burkholderia cenocepacia AU 1054 4093303 YP_620891.1 CDS Bcen_1010 NC_008060.1 1099630 1099947 D KEGG: bur:Bcep18194_A4632 hypothetical protein; hypothetical protein 1099630..1099947 Burkholderia cenocepacia AU 1054 4093304 YP_620892.1 CDS Bcen_1011 NC_008060.1 1100145 1100396 R KEGG: bur:Bcep18194_A4633 hypothetical protein; hypothetical protein complement(1100145..1100396) Burkholderia cenocepacia AU 1054 4093305 YP_620893.1 CDS Bcen_1012 NC_008060.1 1100595 1100996 R KEGG: bur:Bcep18194_A4634 hypothetical protein; hypothetical protein complement(1100595..1100996) Burkholderia cenocepacia AU 1054 4093306 YP_620894.1 CDS Bcen_1013 NC_008060.1 1101424 1102326 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4635 transcriptional regulator, LysR family; LysR family transcriptional regulator 1101424..1102326 Burkholderia cenocepacia AU 1054 4093307 YP_620895.1 CDS Bcen_1014 NC_008060.1 1102403 1103605 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1102403..1103605 Burkholderia cenocepacia AU 1054 4093308 YP_620896.1 CDS Bcen_1015 NC_008060.1 1103878 1104915 D PFAM: chromosome segregation and condensation protein ScpB; KEGG: bur:Bcep18194_A4637 transcriptional regulator; transcriptional regulator 1103878..1104915 Burkholderia cenocepacia AU 1054 4093309 YP_620897.1 CDS Bcen_1016 NC_008060.1 1104976 1106736 D TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4; pseudouridine synthase; KEGG: bur:Bcep18194_A4638 pseudouridine synthase, Rsu; pseudouridine synthase, Rsu 1104976..1106736 Burkholderia cenocepacia AU 1054 4093310 YP_620898.1 CDS Bcen_1017 NC_008060.1 1106733 1106984 R hypothetical protein complement(1106733..1106984) Burkholderia cenocepacia AU 1054 4093311 YP_620899.1 CDS Bcen_1018 NC_008060.1 1107185 1107643 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1107185..1107643 Burkholderia cenocepacia AU 1054 4093312 YP_620900.1 CDS nusA NC_008060.1 1107643 1109118 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1107643..1109118 Burkholderia cenocepacia AU 1054 4093313 YP_620901.1 CDS infB NC_008060.1 1109210 1112125 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1109210..1112125 Burkholderia cenocepacia AU 1054 4093314 YP_620902.1 CDS rbfA NC_008060.1 1112240 1112638 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1112240..1112638 Burkholderia cenocepacia AU 1054 4092251 YP_620903.1 CDS truB NC_008060.1 1112652 1113584 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1112652..1113584 Burkholderia cenocepacia AU 1054 4092252 YP_620904.1 CDS Bcen_1023 NC_008060.1 1113681 1115240 R TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4644 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(1113681..1115240) Burkholderia cenocepacia AU 1054 4092253 YP_620905.1 CDS Bcen_1024 NC_008060.1 1115269 1116483 R PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_A4645 secretion protein HlyD family; secretion protein HlyD complement(1115269..1116483) Burkholderia cenocepacia AU 1054 4092254 YP_620906.1 CDS Bcen_1026 NC_008060.1 1118121 1118612 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_A4647 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(1118121..1118612) Burkholderia cenocepacia AU 1054 4092256 YP_620907.1 CDS Bcen_1027 NC_008060.1 1118943 1120769 D TIGRFAM: Small GTP-binding protein domain; GTP-binding protein TypA; PFAM: elongation factor G-like; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2; KEGG: bur:Bcep18194_A4648 GTP-binding protein TypA; GTP-binding protein TypA 1118943..1120769 Burkholderia cenocepacia AU 1054 4092257 YP_620908.1 CDS sucA NC_008060.1 1121087 1123951 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1121087..1123951 Burkholderia cenocepacia AU 1054 4092258 YP_620909.1 CDS Bcen_1029 NC_008060.1 1124088 1125368 D component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1124088..1125368 Burkholderia cenocepacia AU 1054 4092259 YP_620910.1 CDS Bcen_1030 NC_008060.1 1125450 1126880 D E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1125450..1126880 Burkholderia cenocepacia AU 1054 4092260 YP_620911.1 CDS Bcen_1031 NC_008060.1 1126981 1128078 D PFAM: AFG1-like ATPase; KEGG: bur:Bcep18194_A4652 AFG1-like ATPase; AFG1-like ATPase 1126981..1128078 Burkholderia cenocepacia AU 1054 4092261 YP_620912.1 CDS Bcen_1032 NC_008060.1 1128227 1128637 D KEGG: bur:Bcep18194_A4653 hypothetical protein; hypothetical protein 1128227..1128637 Burkholderia cenocepacia AU 1054 4092262 YP_620913.1 CDS Bcen_1033 NC_008060.1 1128737 1129198 R KEGG: bur:Bcep18194_A4654 hypothetical protein; hypothetical protein complement(1128737..1129198) Burkholderia cenocepacia AU 1054 4092263 YP_620914.1 CDS Bcen_1034 NC_008060.1 1129373 1131058 R PFAM: Polypeptide-transport-associated, ShlB-type; KEGG: bur:Bcep18194_A4655 hemolysin activation/secretion protein; polypeptide-transport-associated, ShlB-type complement(1129373..1131058) Burkholderia cenocepacia AU 1054 4092264 YP_620915.1 CDS Bcen_1035 NC_008060.1 1131203 1132627 R KEGG: bur:Bcep18194_A4656 hypothetical protein; hypothetical protein complement(1131203..1132627) Burkholderia cenocepacia AU 1054 4092265 YP_620916.1 CDS Bcen_1036 NC_008060.1 1132668 1134356 R KEGG: bur:Bcep18194_A4657 hypothetical protein; hypothetical protein complement(1132668..1134356) Burkholderia cenocepacia AU 1054 4092266 YP_620917.1 CDS Bcen_1037 NC_008060.1 1135033 1135203 D PFAM: Flp/Fap pilin component; KEGG: bte:BTH_I2546 pilin; Flp/Fap pilin component 1135033..1135203 Burkholderia cenocepacia AU 1054 4092267 YP_620918.1 CDS Bcen_1038 NC_008060.1 1135291 1135785 D PFAM: peptidase A24A, prepilin type IV; KEGG: bur:Bcep18194_A4658 peptidase A24A, prepilin type IV; peptidase A24A, prepilin type IV 1135291..1135785 Burkholderia cenocepacia AU 1054 4092268 YP_620919.1 CDS Bcen_1039 NC_008060.1 1135782 1136276 D PFAM: TadE-like; KEGG: bur:Bcep18194_A4659 Flp pilus assembly protein TadG; TadE-like protein 1135782..1136276 Burkholderia cenocepacia AU 1054 4092269 YP_620920.1 CDS Bcen_1040 NC_008060.1 1136372 1137277 D PFAM: Flp pilus assembly CpaB; KEGG: bur:Bcep18194_A4660 Flp pilus assembly CpaB; Flp pilus assembly CpaB 1136372..1137277 Burkholderia cenocepacia AU 1054 4092270 YP_620921.1 CDS Bcen_1041 NC_008060.1 1137300 1138631 D PFAM: type II and III secretion system protein; KEGG: bur:Bcep18194_A4661 Flp pilus assembly protein secretin CpaC; type II and III secretion system protein 1137300..1138631 Burkholderia cenocepacia AU 1054 4092700 YP_620922.1 CDS Bcen_1042 NC_008060.1 1138707 1139945 D KEGG: bur:Bcep18194_A4662 response regulator receiver domain protein (CheY-like); response regulator receiver protein 1138707..1139945 Burkholderia cenocepacia AU 1054 4092701 YP_620923.1 CDS Bcen_1043 NC_008060.1 1139949 1141301 D PFAM: type II secretion system protein E; KEGG: bur:Bcep18194_A4663 Flp pilus assembly protein ATPase CpaF; type II secretion system protein E 1139949..1141301 Burkholderia cenocepacia AU 1054 4092702 YP_620924.1 CDS Bcen_1044 NC_008060.1 1141294 1142274 D PFAM: type II secretion system protein; KEGG: bur:Bcep18194_A4664 Flp pilus assembly protein TadB; type II secretion system protein 1141294..1142274 Burkholderia cenocepacia AU 1054 4092703 YP_620925.1 CDS Bcen_1045 NC_008060.1 1142279 1143244 D PFAM: type II secretion system protein; KEGG: bur:Bcep18194_A4665 Flp pilus assembly protein TadC; type II secretion system protein 1142279..1143244 Burkholderia cenocepacia AU 1054 4092704 YP_620926.1 CDS Bcen_1046 NC_008060.1 1143274 1144101 D PFAM: Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: bur:Bcep18194_A4666 Flp pilus assembly protein TadD contains TPRrepeats; hypothetical protein 1143274..1144101 Burkholderia cenocepacia AU 1054 4092705 YP_620927.1 CDS Bcen_1047 NC_008060.1 1144125 1144451 D KEGG: bur:Bcep18194_A4667 hypothetical protein; hypothetical protein 1144125..1144451 Burkholderia cenocepacia AU 1054 4092706 YP_620928.1 CDS Bcen_1048 NC_008060.1 1144464 1146275 D KEGG: bur:Bcep18194_A4668 membrane protein; membrane protein 1144464..1146275 Burkholderia cenocepacia AU 1054 4092707 YP_620929.1 CDS Bcen_1049 NC_008060.1 1146289 1147680 D PFAM: sigma-54 factor, interaction region; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: bps:BPSL1887 sigma-54 related transcriptional regulatory protein; sigma-54 dependent trancsriptional regulator 1146289..1147680 Burkholderia cenocepacia AU 1054 4092708 YP_620930.1 CDS Bcen_1050 NC_008060.1 1147735 1148445 D KEGG: bur:Bcep18194_A4670 hypothetical protein; hypothetical protein 1147735..1148445 Burkholderia cenocepacia AU 1054 4092709 YP_620931.1 CDS Bcen_1051 NC_008060.1 1148527 1149105 R TIGRFAM: Host factor Hfq; PFAM: Like-Sm ribonucleoprotein, core; KEGG: bur:Bcep18194_A4671 host factor Hfq; host factor Hfq complement(1148527..1149105) Burkholderia cenocepacia AU 1054 4092710 YP_620932.1 CDS Bcen_1052 NC_008060.1 1149392 1149685 D KEGG: bur:Bcep18194_A4672 hypothetical protein; hypothetical protein 1149392..1149685 Burkholderia cenocepacia AU 1054 4092711 YP_620933.1 CDS Bcen_1053 NC_008060.1 1149712 1150629 R KEGG: bur:Bcep18194_A4673 hypothetical protein; hypothetical protein complement(1149712..1150629) Burkholderia cenocepacia AU 1054 4092712 YP_620934.1 CDS Bcen_1054 NC_008060.1 1150659 1152413 R PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A4674 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(1150659..1152413) Burkholderia cenocepacia AU 1054 4092713 YP_620935.1 CDS Bcen_1055 NC_008060.1 1152570 1153391 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_A4675 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1152570..1153391) Burkholderia cenocepacia AU 1054 4092714 YP_620936.1 CDS Bcen_1056 NC_008060.1 1153607 1154827 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4676 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1153607..1154827) Burkholderia cenocepacia AU 1054 4092715 YP_620937.1 CDS Bcen_1057 NC_008060.1 1155108 1155650 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4677 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1155108..1155650 Burkholderia cenocepacia AU 1054 4092716 YP_620938.1 CDS Bcen_1058 NC_008060.1 1155774 1156400 D KEGG: bur:Bcep18194_A4678 hypothetical protein; hypothetical protein 1155774..1156400 Burkholderia cenocepacia AU 1054 4092717 YP_620939.1 CDS Bcen_1059 NC_008060.1 1156424 1158139 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bur:Bcep18194_A4679 sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter 1156424..1158139 Burkholderia cenocepacia AU 1054 4092718 YP_620940.1 CDS Bcen_1060 NC_008060.1 1158162 1159100 R PFAM: PfkB; KEGG: bur:Bcep18194_A4680 PfkB, ribokinase family; PfkB protein complement(1158162..1159100) Burkholderia cenocepacia AU 1054 4092161 YP_620941.1 CDS Bcen_1061 NC_008060.1 1159234 1160178 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4681 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator complement(1159234..1160178) Burkholderia cenocepacia AU 1054 4092162 YP_620942.1 CDS Bcen_1062 NC_008060.1 1160265 1161302 R PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4682 ABC sugar transporter, inner membrane subunit; inner-membrane translocator complement(1160265..1161302) Burkholderia cenocepacia AU 1054 4092163 YP_620943.1 CDS Bcen_1063 NC_008060.1 1161346 1162899 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4683 ABC sugar transporter, ATPase subunit; ABC transporter complement(1161346..1162899) Burkholderia cenocepacia AU 1054 4092164 YP_620944.1 CDS Bcen_1064 NC_008060.1 1162886 1164133 R PFAM: ROK; KEGG: bur:Bcep18194_A4684 ROK family protein; ROK domain-containing protein complement(1162886..1164133) Burkholderia cenocepacia AU 1054 4092165 YP_620945.1 CDS Bcen_1065 NC_008060.1 1165128 1166117 R KEGG: bur:Bcep18194_A4685 ABC transporter, substrate-binding protein, aliphatic sulphonates TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; ABC transporter, substrate-binding protein, aliphatic sulfonates complement(1165128..1166117) Burkholderia cenocepacia AU 1054 4092168 YP_620946.1 CDS Bcen_1066 NC_008060.1 1166641 1169124 D KEGG: bur:Bcep18194_A4688 3'-5' exoribonuclease, VacB and RNase II/ribonuclease R TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; Ribonuclease R; PFAM: ribonuclease II; RNA binding S1; Ribonuclease B, OB region-like; SMART: Cold shock protein; ribonuclease R 1166641..1169124 Burkholderia cenocepacia AU 1054 4092170 YP_620947.1 CDS Bcen_1067 NC_008060.1 1169273 1170016 D TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: bur:Bcep18194_A4689 RNA methyltransferase TrmH, group 3; RNA methyltransferase TrmH, group 3 1169273..1170016 Burkholderia cenocepacia AU 1054 4092171 YP_620948.1 CDS Bcen_1068 NC_008060.1 1170150 1171022 D PFAM: Peptidoglycan-binding domain 1; N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: bur:Bcep18194_A4690 negative regulator of AmpC, AmpD; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1170150..1171022 Burkholderia cenocepacia AU 1054 4092172 YP_620949.1 CDS Bcen_1069 NC_008060.1 1171115 1171810 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1171115..1171810 Burkholderia cenocepacia AU 1054 4092173 YP_620950.1 CDS Bcen_1070 NC_008060.1 1172093 1172809 D PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: bur:Bcep18194_A4692 transcriptional regulator, GntR family; GntR family transcriptional regulator 1172093..1172809 Burkholderia cenocepacia AU 1054 4092174 YP_620951.1 CDS Bcen_1071 NC_008060.1 1172911 1173897 D PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase-like; KEGG: bur:Bcep18194_A4693 oxidoreductase; oxidoreductase-like 1172911..1173897 Burkholderia cenocepacia AU 1054 4092175 YP_620952.1 CDS Bcen_1072 NC_008060.1 1173953 1174675 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4694 ABC polar amino acid transporter, inner membrane subunit; amino acid ABC transporter permease complement(1173953..1174675) Burkholderia cenocepacia AU 1054 4092176 YP_620953.1 CDS Bcen_1073 NC_008060.1 1174764 1175558 R PFAM: extracellular solute-binding protein, family 3; SMART: Ionotropic glutamate receptor; KEGG: bur:Bcep18194_A4695 ABC polar amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(1174764..1175558) Burkholderia cenocepacia AU 1054 4093164 YP_620954.1 CDS Bcen_1074 NC_008060.1 1175659 1176729 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(1175659..1176729) Burkholderia cenocepacia AU 1054 4093165 YP_620955.1 CDS Bcen_1075 NC_008060.1 1176795 1177625 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1176795..1177625) Burkholderia cenocepacia AU 1054 4093166 YP_620956.1 CDS aat NC_008060.1 1177659 1178423 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(1177659..1178423) Burkholderia cenocepacia AU 1054 4093167 YP_620957.1 CDS Bcen_1077 NC_008060.1 1178435 1178980 R PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4699 NUDIX hydrolase; NUDIX hydrolase complement(1178435..1178980) Burkholderia cenocepacia AU 1054 4093168 YP_620958.1 CDS Bcen_1078 NC_008060.1 1179449 1179946 D PFAM: protein of unknown function DUF336; KEGG: bur:Bcep18194_A4700 protein of unknown function DUF336; hypothetical protein 1179449..1179946 Burkholderia cenocepacia AU 1054 4093170 YP_620959.1 CDS Bcen_1079 NC_008060.1 1179950 1180288 D PFAM: small multidrug resistance protein; KEGG: bur:Bcep18194_A4701 small multidrug resistance protein; small multidrug resistance protein 1179950..1180288 Burkholderia cenocepacia AU 1054 4093171 YP_620960.1 CDS Bcen_1080 NC_008060.1 1180311 1181474 D catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 1180311..1181474 Burkholderia cenocepacia AU 1054 4093172 YP_620961.1 CDS Bcen_1081 NC_008060.1 1181609 1182037 R KEGG: bur:Bcep18194_A4703 hypothetical protein; hypothetical protein complement(1181609..1182037) Burkholderia cenocepacia AU 1054 4093173 YP_620962.1 CDS Bcen_1082 NC_008060.1 1182378 1183535 D catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 1182378..1183535 Burkholderia cenocepacia AU 1054 4093174 YP_620963.1 CDS Bcen_1083 NC_008060.1 1183552 1184364 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4705 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein; binding-protein-dependent transport system inner membrane protein 1183552..1184364 Burkholderia cenocepacia AU 1054 4093175 YP_620964.1 CDS Bcen_1084 NC_008060.1 1184361 1185320 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4706 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit; ABC transporter 1184361..1185320 Burkholderia cenocepacia AU 1054 4093176 YP_620965.1 CDS Bcen_1085 NC_008060.1 1185378 1185593 D TIGRFAM: molybdenum-pterin binding domain; PFAM: TOBE; KEGG: bur:Bcep18194_A4707 molybdenum-pterin binding protein; molybdenum-pterin-binding domain-containing protein 1185378..1185593 Burkholderia cenocepacia AU 1054 4093177 YP_620966.1 CDS Bcen_1086 NC_008060.1 1185736 1185933 D KEGG: bur:Bcep18194_A4708 hypothetical protein; hypothetical protein 1185736..1185933 Burkholderia cenocepacia AU 1054 4093178 YP_620967.1 CDS Bcen_1087 NC_008060.1 1185989 1186234 D KEGG: bur:Bcep18194_A4709 hypothetical protein; hypothetical protein 1185989..1186234 Burkholderia cenocepacia AU 1054 4093179 YP_620968.1 CDS Bcen_1088 NC_008060.1 1186253 1187350 D TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: bur:Bcep18194_A4710 dihydrouridine synthase TIM-barrel protein YjbN; tRNA-dihydrouridine synthase A 1186253..1187350 Burkholderia cenocepacia AU 1054 4093180 YP_620969.1 CDS Bcen_1089 NC_008060.1 1187569 1187826 R KEGG: eba:ebA5849 phage-related integrase; phage-related integrase complement(1187569..1187826) Burkholderia cenocepacia AU 1054 4092232 YP_620970.1 CDS Bcen_1090 NC_008060.1 1187866 1188489 R KEGG: reu:Reut_A2368 phage-related conserved hypothetical protein; hypothetical protein complement(1187866..1188489) Burkholderia cenocepacia AU 1054 4092233 YP_620971.1 CDS Bcen_1091 NC_008060.1 1188731 1189627 D PFAM: Curculin-like (mannose-binding) lectin; KEGG: pfl:PFL_1229 putidacin L1; curculin-like (mannose-binding) lectin 1188731..1189627 Burkholderia cenocepacia AU 1054 4092234 YP_620972.1 CDS Bcen_1092 NC_008060.1 1190196 1191008 D PFAM: Curculin-like (mannose-binding) lectin; KEGG: bps:BPSS2022 outer membrane protein; curculin-like (mannose-binding) lectin 1190196..1191008 Burkholderia cenocepacia AU 1054 4092235 YP_620973.1 CDS Bcen_1093 NC_008060.1 1191392 1191715 R KEGG: reu:Reut_A2369 C-5 cytosine-specific DNA methylase; C-5 cytosine-specific DNA methylase complement(1191392..1191715) Burkholderia cenocepacia AU 1054 4092236 YP_620974.1 CDS Bcen_1094 NC_008060.1 1191887 1192957 R KEGG: psp:PSPPH_1694 hypothetical protein; hypothetical protein complement(1191887..1192957) Burkholderia cenocepacia AU 1054 4092237 YP_620975.1 CDS Bcen_1095 NC_008060.1 1193291 1194412 D KEGG: gox:GOX1227 hypothetical protein; hypothetical protein 1193291..1194412 Burkholderia cenocepacia AU 1054 4092238 YP_620976.1 CDS Bcen_1096 NC_008060.1 1195038 1195553 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4712 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1195038..1195553 Burkholderia cenocepacia AU 1054 4092239 YP_620977.1 CDS Bcen_1097 NC_008060.1 1195646 1196110 R KEGG: bur:Bcep18194_A4713 hypothetical protein; hypothetical protein complement(1195646..1196110) Burkholderia cenocepacia AU 1054 4092240 YP_620978.1 CDS Bcen_1098 NC_008060.1 1196413 1196808 D KEGG: bur:Bcep18194_A4714 hypothetical protein; hypothetical protein 1196413..1196808 Burkholderia cenocepacia AU 1054 4092241 YP_620979.1 CDS Bcen_1099 NC_008060.1 1197577 1198320 R PFAM: protein of unknown function DUF1260; KEGG: bur:Bcep18194_A4716 hypothetical protein; hypothetical protein complement(1197577..1198320) Burkholderia cenocepacia AU 1054 4092242 YP_620980.1 CDS Bcen_1100 NC_008060.1 1198504 1198812 D KEGG: bur:Bcep18194_A4718 hypothetical protein; hypothetical protein 1198504..1198812 Burkholderia cenocepacia AU 1054 4092243 YP_620981.1 CDS Bcen_1101 NC_008060.1 1198853 1199101 D KEGG: bur:Bcep18194_A4719 hypothetical protein; hypothetical protein 1198853..1199101 Burkholderia cenocepacia AU 1054 4092244 YP_620982.1 CDS Bcen_1102 NC_008060.1 1199205 1199747 D KEGG: bur:Bcep18194_A4720 hypothetical protein; hypothetical protein 1199205..1199747 Burkholderia cenocepacia AU 1054 4092245 YP_620983.1 CDS Bcen_1103 NC_008060.1 1199908 1200381 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A4721 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1199908..1200381 Burkholderia cenocepacia AU 1054 4092246 YP_620984.1 CDS Bcen_1104 NC_008060.1 1200875 1201102 D hypothetical protein 1200875..1201102 Burkholderia cenocepacia AU 1054 4092247 YP_620985.1 CDS Bcen_1105 NC_008060.1 1201247 1201975 R KEGG: bur:Bcep18194_A4723 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases like enzyme; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases like enzyme complement(1201247..1201975) Burkholderia cenocepacia AU 1054 4092248 YP_620986.1 CDS Bcen_1106 NC_008060.1 1202215 1202703 R PFAM: helix-turn-helix, HxlR type; KEGG: bur:Bcep18194_A4724 transcriptional regulator; HxlR family transcriptional regulator complement(1202215..1202703) Burkholderia cenocepacia AU 1054 4092249 YP_620987.1 CDS Bcen_1107 NC_008060.1 1202891 1203328 D TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily; KEGG: bur:Bcep18194_A4725 phenylacetic acid degradation-related protein; phenylacetic acid degradation-related protein 1202891..1203328 Burkholderia cenocepacia AU 1054 4092250 YP_620988.1 CDS Bcen_1108 NC_008060.1 1203477 1204529 D PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_A4726 aldo/keto reductase; aldo/keto reductase 1203477..1204529 Burkholderia cenocepacia AU 1054 4093768 YP_620989.1 CDS Bcen_1109 NC_008060.1 1204627 1205913 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4727 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1204627..1205913) Burkholderia cenocepacia AU 1054 4093769 YP_620990.1 CDS Bcen_1110 NC_008060.1 1205950 1207371 R PFAM: peptidase M20; peptidase dimerisation; KEGG: bur:Bcep18194_A4728 peptidase M20; hypothetical protein complement(1205950..1207371) Burkholderia cenocepacia AU 1054 4093770 YP_620991.1 CDS Bcen_1111 NC_008060.1 1207535 1208488 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4729 transcriptional regulator, LysR family; LysR family transcriptional regulator 1207535..1208488 Burkholderia cenocepacia AU 1054 4093771 YP_620992.1 CDS Bcen_1112 NC_008060.1 1208553 1209680 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 1208553..1209680 Burkholderia cenocepacia AU 1054 4093772 YP_620993.1 CDS Bcen_1113 NC_008060.1 1209677 1210735 D PFAM: permease; KEGG: bur:Bcep18194_A4731 transporter; permease 1209677..1210735 Burkholderia cenocepacia AU 1054 4093773 YP_620994.1 CDS Bcen_1114 NC_008060.1 1210842 1211264 D KEGG: bur:Bcep18194_A4732 hypothetical protein; hypothetical protein 1210842..1211264 Burkholderia cenocepacia AU 1054 4093774 YP_620995.1 CDS Bcen_1115 NC_008060.1 1211309 1212142 R TIGRFAM: ABC transporter, NodJ family; PFAM: ABC transporter; KEGG: bur:Bcep18194_A4733 ABC efflux pump, inner membrane subunit, NodJ; ABC transporter complement(1211309..1212142) Burkholderia cenocepacia AU 1054 4093775 YP_620996.1 CDS Bcen_1116 NC_008060.1 1212149 1213063 R involved in the export of lipooligosaccharides during nodulation; nodulation ABC transporter NodI complement(1212149..1213063) Burkholderia cenocepacia AU 1054 4093776 YP_620997.1 CDS Bcen_1117 NC_008060.1 1213395 1213892 D PFAM: UspA; KEGG: bur:Bcep18194_A4735 universal stress protein, UspA family; hypothetical protein 1213395..1213892 Burkholderia cenocepacia AU 1054 4093777 YP_620998.1 CDS Bcen_1118 NC_008060.1 1213988 1214707 R KEGG: bur:Bcep18194_A4736 hypothetical protein; hypothetical protein complement(1213988..1214707) Burkholderia cenocepacia AU 1054 4093778 YP_620999.1 CDS Bcen_1119 NC_008060.1 1214737 1215072 R KEGG: bur:Bcep18194_A4737 hypothetical protein; hypothetical protein complement(1214737..1215072) Burkholderia cenocepacia AU 1054 4093779 YP_621000.1 CDS Bcen_1120 NC_008060.1 1215098 1215745 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1215098..1215745) Burkholderia cenocepacia AU 1054 4093780 YP_621001.1 CDS Bcen_1121 NC_008060.1 1216010 1217047 D TIGRFAM: Thiosulphate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_A4739 thiosulphate-binding protein; thiosulfate-binding protein 1216010..1217047 Burkholderia cenocepacia AU 1054 4093781 YP_621002.1 CDS Bcen_1122 NC_008060.1 1217171 1218067 D TIGRFAM: Sulphate ABC transporter permease 2; sulfate ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4740 sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter permease 1217171..1218067 Burkholderia cenocepacia AU 1054 4093782 YP_621003.1 CDS Bcen_1123 NC_008060.1 1218067 1219011 D TIGRFAM: Sulphate ABC transporter permease 2; sulfate ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4741 sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter permease 1218067..1219011 Burkholderia cenocepacia AU 1054 4093783 YP_621004.1 CDS Bcen_1124 NC_008060.1 1219025 1220083 D KEGG: bur:Bcep18194_A4742 ABC sulfate transporter, ATPase subunit TIGRFAM: Sulphate ABC transporter permease 1; PFAM: ABC transporter related; TOBE; Transport-associated OB; SMART: ATPase; sulfate ABC transporter permease 1 1219025..1220083 Burkholderia cenocepacia AU 1054 4093784 YP_621005.1 CDS Bcen_1125 NC_008060.1 1220159 1221085 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4743 transcriptional regulator, LysR family; transcriptional regulator CysB-like protein 1220159..1221085 Burkholderia cenocepacia AU 1054 4093785 YP_621006.1 CDS Bcen_1126 NC_008060.1 1221826 1222776 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4745 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator 1221826..1222776 Burkholderia cenocepacia AU 1054 4093786 YP_621007.1 CDS Bcen_1127 NC_008060.1 1222922 1224535 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4746 ABC sugar transporter, ATPase subunit; ABC transporter 1222922..1224535 Burkholderia cenocepacia AU 1054 4093787 YP_621008.1 CDS Bcen_1128 NC_008060.1 1224532 1225551 D PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A4747 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 1224532..1225551 Burkholderia cenocepacia AU 1054 4092347 YP_621009.1 CDS Bcen_1129 NC_008060.1 1225587 1226618 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A4748 transcriptional regulator, LacI family; LacI family transcriptional regulator 1225587..1226618 Burkholderia cenocepacia AU 1054 4092348 YP_621010.1 CDS Bcen_1130 NC_008060.1 1226615 1227550 D TIGRFAM: Ribokinase; PFAM: PfkB; Phosphomethylpyrimidine kinase type-1; KEGG: bur:Bcep18194_A4749 ribokinase; ribokinase 1226615..1227550 Burkholderia cenocepacia AU 1054 4092349 YP_621011.1 CDS Bcen_1131 NC_008060.1 1227849 1229615 D PFAM: histidine kinase, HAMP region; chemotaxis sensory transducer; KEGG: bur:Bcep18194_A4750 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1227849..1229615 Burkholderia cenocepacia AU 1054 4092350 YP_621012.1 CDS Bcen_1132 NC_008060.1 1229644 1230069 D hypothetical protein 1229644..1230069 Burkholderia cenocepacia AU 1054 4092351 YP_621013.1 CDS Bcen_1133 NC_008060.1 1230159 1232081 D PFAM: PrkA serine kinase; PrkA AAA; KEGG: bur:Bcep18194_A4751 serine protein kinase, PrkA; serine protein kinase PrkA 1230159..1232081 Burkholderia cenocepacia AU 1054 4092352 YP_621014.1 CDS Bcen_1134 NC_008060.1 1232207 1233475 D PFAM: protein of unknown function DUF444; KEGG: bur:Bcep18194_A4752 protein of unknown function DUF444; hypothetical protein 1232207..1233475 Burkholderia cenocepacia AU 1054 4092353 YP_621015.1 CDS Bcen_1135 NC_008060.1 1233628 1235151 D PFAM: SpoVR; KEGG: bur:Bcep18194_A4753 SpoVR family protein; SpoVR family protein 1233628..1235151 Burkholderia cenocepacia AU 1054 4092354 YP_621016.1 CDS Bcen_1136 NC_008060.1 1235386 1236690 D TIGRFAM: metabolite; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4754 citrate-proton symporter, (MFS_1); hypothetical protein 1235386..1236690 Burkholderia cenocepacia AU 1054 4092355 YP_621017.1 CDS Bcen_1137 NC_008060.1 1237148 1237963 D PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_A4762 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein 1237148..1237963 Burkholderia cenocepacia AU 1054 4092356 YP_621018.1 CDS Bcen_1138 NC_008060.1 1238058 1238780 D TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4763 ABC polar amino acid transporter, inner membrane subunit; amino acid ABC transporter permease 1238058..1238780 Burkholderia cenocepacia AU 1054 4092357 YP_621019.1 CDS Bcen_1139 NC_008060.1 1238783 1239508 D TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4764 ABC polar amino acid transporter, inner membrane subunit; amino acid ABC transporter permease 1238783..1239508 Burkholderia cenocepacia AU 1054 4092358 YP_621020.1 CDS Bcen_1140 NC_008060.1 1239671 1240936 R PFAM: peptidase M23B; KEGG: bur:Bcep18194_A4765 peptidase M23B; peptidase M23B complement(1239671..1240936) Burkholderia cenocepacia AU 1054 4092359 YP_621021.1 CDS Bcen_1141 NC_008060.1 1241275 1241922 R PFAM: regulatory protein, TetR; Tetracycline transcriptional repressor MAATS-type-like; KEGG: bur:Bcep18194_A4766 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1241275..1241922) Burkholderia cenocepacia AU 1054 4092360 YP_621022.1 CDS Bcen_1142 NC_008060.1 1242074 1243276 D MexX; AmrA; involved in resistance to antibiotics; periplasmic membrane fusion protein; functions along with MexY and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; periplasmic multidrug efflux lipoprotein precursor 1242074..1243276 Burkholderia cenocepacia AU 1054 4092361 YP_621023.1 CDS Bcen_1143 NC_008060.1 1243292 1246432 D MexY; AmrB; involved in resistance to antibiotics; inner membrane protein; belongs to RND (resistance, nodulation, cell division) family of transporters; functions along with MexX and OprM; part of an inducible system that appears to respond to interference with the cellular translation machinery; multidrug efflux protein 1243292..1246432 Burkholderia cenocepacia AU 1054 4092362 YP_621024.1 CDS Bcen_1144 NC_008060.1 1246432 1247892 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A4769 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT 1246432..1247892 Burkholderia cenocepacia AU 1054 4092363 YP_621025.1 CDS Bcen_1145 NC_008060.1 1247921 1248280 D hypothetical protein 1247921..1248280 Burkholderia cenocepacia AU 1054 4092364 YP_621026.1 CDS Bcen_1146 NC_008060.1 1248748 1249260 D PFAM: Fimbrial protein; KEGG: bpm:BURPS1710b_2060 FimA; fimbrial protein 1248748..1249260 Burkholderia cenocepacia AU 1054 4092365 YP_621027.1 CDS Bcen_1147 NC_008060.1 1249349 1251835 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bur:Bcep18194_A4772 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 1249349..1251835 Burkholderia cenocepacia AU 1054 4093373 YP_621028.1 CDS Bcen_1148 NC_008060.1 1251852 1252598 D PFAM: pili assembly chaperone; KEGG: bur:Bcep18194_A4773 pili assembly chaperone; pili assembly chaperone 1251852..1252598 Burkholderia cenocepacia AU 1054 4093374 YP_621029.1 CDS Bcen_1149 NC_008060.1 1252595 1253620 D KEGG: bur:Bcep18194_A4774 fimbrial protein; fimbrial protein 1252595..1253620 Burkholderia cenocepacia AU 1054 4093375 YP_621030.1 CDS Bcen_1150 NC_008060.1 1253845 1253982 R KEGG: bur:Bcep18194_A4776 hypothetical protein; hypothetical protein complement(1253845..1253982) Burkholderia cenocepacia AU 1054 4093376 YP_621031.1 CDS Bcen_1151 NC_008060.1 1254029 1254256 R KEGG: bur:Bcep18194_A4777 hypothetical protein; hypothetical protein complement(1254029..1254256) Burkholderia cenocepacia AU 1054 4093377 YP_621032.1 CDS Bcen_1152 NC_008060.1 1254550 1255218 D RNA polymerase sigma factor involved in the synthesis of the siderophores pyoverdine in Pseudomonas and malleobactin in Burkholderia; also involved in the synthesis of exotoxin and PrpL protease; extracytoplasmic-function sigma-70 factor 1254550..1255218 Burkholderia cenocepacia AU 1054 4093378 YP_621033.1 CDS Bcen_1153 NC_008060.1 1255304 1255546 D PFAM: MbtH-like protein; KEGG: bur:Bcep18194_A4779 MbtH-like protein; MbtH-like protein 1255304..1255546 Burkholderia cenocepacia AU 1054 4093379 YP_621034.1 CDS Bcen_1154 NC_008060.1 1255592 1256599 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_A4780 hypothetical protein; taurine catabolism dioxygenase TauD/TfdA 1255592..1256599 Burkholderia cenocepacia AU 1054 4093380 YP_621035.1 CDS Bcen_1155 NC_008060.1 1256599 1257447 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4781 ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit; ABC transporter 1256599..1257447 Burkholderia cenocepacia AU 1054 4093381 YP_621036.1 CDS Bcen_1156 NC_008060.1 1257444 1259534 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 1257444..1259534 Burkholderia cenocepacia AU 1054 4093382 YP_621037.1 CDS Bcen_1157 NC_008060.1 1259531 1260331 D PFAM: ferric iron reductase; KEGG: bur:Bcep18194_A4783 ferric iron reductase; ferric iron reductase 1259531..1260331 Burkholderia cenocepacia AU 1054 4093383 YP_621038.1 CDS Bcen_1158 NC_008060.1 1260328 1261353 D PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_A4784 ABC Fe3+-siderophore transporter, periplasmic ligand binding protein; periplasmic binding protein 1260328..1261353 Burkholderia cenocepacia AU 1054 4093384 YP_621039.1 CDS Bcen_1159 NC_008060.1 1261542 1263365 R KEGG: bur:Bcep18194_A4785 ABC cyclic peptide/siderophore export pump, fused ATPase and inner membrane subunits TIGRFAM: Cyclic peptide transporter; PFAM: ABC transporter related; SMART: ATPase; cyclic peptide transporter complement(1261542..1263365) Burkholderia cenocepacia AU 1054 4093385 YP_621040.1 CDS Bcen_1160 NC_008060.1 1263518 1273213 D TIGRFAM: Non-ribosomal peptide synthase; Amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; condensation domain; phosphopantetheine-binding; KEGG: bur:Bcep18194_A4786 non-ribosomal peptide synthase; amino acid adenylation 1263518..1273213 Burkholderia cenocepacia AU 1054 4093386 YP_621041.1 CDS Bcen_1161 NC_008060.1 1273223 1278211 D TIGRFAM: Amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; condensation domain; phosphopantetheine-binding; KEGG: bur:Bcep18194_A4787 amino acid adenylation; amino acid adenylation 1273223..1278211 Burkholderia cenocepacia AU 1054 4093387 YP_621042.1 CDS Bcen_1162 NC_008060.1 1278201 1279232 D KEGG: bur:Bcep18194_A4788 hypothetical protein; hypothetical protein 1278201..1279232 Burkholderia cenocepacia AU 1054 4093388 YP_621043.1 CDS Bcen_1163 NC_008060.1 1279265 1280641 D KEGG: bur:Bcep18194_A4789 lysine/ornithine N-monooxygenase; lysine/ornithine N-monooxygenase 1279265..1280641 Burkholderia cenocepacia AU 1054 4093389 YP_621044.1 CDS Bcen_1164 NC_008060.1 1280664 1282928 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bur:Bcep18194_A4790 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 1280664..1282928 Burkholderia cenocepacia AU 1054 4093390 YP_621045.1 CDS Bcen_1165 NC_008060.1 1283016 1283855 D KEGG: bur:Bcep18194_A4791 folate-dependent phosphoribosylglycinamide formyltransferase PurN-like; folate-dependent phosphoribosylglycinamide formyltransferase PurN-like protein 1283016..1283855 Burkholderia cenocepacia AU 1054 4093391 YP_621046.1 CDS Bcen_1166 NC_008060.1 1283855 1284871 D KEGG: bur:Bcep18194_A4792 hypothetical protein; hypothetical protein 1283855..1284871 Burkholderia cenocepacia AU 1054 4093392 YP_621047.1 CDS Bcen_1167 NC_008060.1 1285001 1285753 R KEGG: bur:Bcep18194_A4795 hypothetical protein; hypothetical protein complement(1285001..1285753) Burkholderia cenocepacia AU 1054 4092606 YP_621048.1 CDS Bcen_1168 NC_008060.1 1285875 1286945 R KEGG: bur:Bcep18194_A4796 hypothetical protein; hypothetical protein complement(1285875..1286945) Burkholderia cenocepacia AU 1054 4092607 YP_621049.1 CDS Bcen_1169 NC_008060.1 1287298 1288461 D KEGG: bur:Bcep18194_A4797 peptidase M20D, amidohydrolase TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation; peptidase M20D, amidohydrolase 1287298..1288461 Burkholderia cenocepacia AU 1054 4092608 YP_621050.1 CDS Bcen_1170 NC_008060.1 1288586 1288873 D PFAM: protein of unknown function UPF0156; KEGG: bur:Bcep18194_A4798 transcriptional regulators, CopG/Arc/MetJ DNA-binding domain; CopG family transcriptional regulator 1288586..1288873 Burkholderia cenocepacia AU 1054 4092609 YP_621051.1 CDS Bcen_1171 NC_008060.1 1288827 1290236 R PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ-like glutamine amidotransferase; KEGG: bur:Bcep18194_A4799 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(1288827..1290236) Burkholderia cenocepacia AU 1054 4092610 YP_621052.1 CDS Bcen_1172 NC_008060.1 1290239 1290841 R catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(1290239..1290841) Burkholderia cenocepacia AU 1054 4092611 YP_621053.1 CDS Bcen_1173 NC_008060.1 1290876 1291253 R catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG complement(1290876..1291253) Burkholderia cenocepacia AU 1054 4092612 YP_621054.1 CDS Bcen_1174 NC_008060.1 1291250 1292059 R catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase complement(1291250..1292059) Burkholderia cenocepacia AU 1054 4092613 YP_621055.1 CDS Bcen_1175 NC_008060.1 1292473 1294722 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pfl:PFL_0310 outer membrane ferric siderophore receptor; TonB-dependent siderophore receptor complement(1292473..1294722) Burkholderia cenocepacia AU 1054 4092615 YP_621056.1 CDS Bcen_1176 NC_008060.1 1295357 1296445 D TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobW; PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW-like; KEGG: bur:Bcep18194_A4805 cobalamin synthesis protein/P47K; cobalamin (vitamin B12) biosynthesis CobW 1295357..1296445 Burkholderia cenocepacia AU 1054 4092617 YP_621057.1 CDS cobN NC_008060.1 1296452 1300261 D with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 1296452..1300261 Burkholderia cenocepacia AU 1054 4092618 YP_621058.1 CDS Bcen_1178 NC_008060.1 1300258 1301334 D PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: bur:Bcep18194_A4807 magnesium chelatase, ChlI subunit; magnesium chelatase, ChlI subunit 1300258..1301334 Burkholderia cenocepacia AU 1054 4092619 YP_621059.1 CDS Bcen_1179 NC_008060.1 1301403 1302011 D KEGG: bur:Bcep18194_A4808 Mg-chelatase subunit ChlD-like; Mg-chelatase subunit ChlD-like 1301403..1302011 Burkholderia cenocepacia AU 1054 4092620 YP_621060.1 CDS Bcen_1180 NC_008060.1 1302073 1302525 D PFAM: protein of unknown function DUF188; KEGG: bur:Bcep18194_A4809 protein of unknown function DUF188; hypothetical protein 1302073..1302525 Burkholderia cenocepacia AU 1054 4092621 YP_621061.1 CDS Bcen_1181 NC_008060.1 1302580 1304088 D PFAM: TPR repeat; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: bur:Bcep18194_A5809 TPR repeat protein; hypothetical protein 1302580..1304088 Burkholderia cenocepacia AU 1054 4092622 YP_621062.1 CDS Bcen_1182 NC_008060.1 1304202 1304888 D KEGG: bur:Bcep18194_A4810 hypothetical protein; hypothetical protein 1304202..1304888 Burkholderia cenocepacia AU 1054 4092623 YP_621063.1 CDS Bcen_1183 NC_008060.1 1304917 1305243 D SMART: Low molecular weight phosphotyrosine protein phosphatase; KEGG: bur:Bcep18194_A4811 low molecular weight phosphotyrosine protein phosphatase; low molecular weight phosphotyrosine protein phosphatase 1304917..1305243 Burkholderia cenocepacia AU 1054 4092048 YP_621064.1 CDS Bcen_1184 NC_008060.1 1305277 1305699 R PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A4812 NUDIX hydrolase; NUDIX hydrolase complement(1305277..1305699) Burkholderia cenocepacia AU 1054 4092049 YP_621065.1 CDS Bcen_1185 NC_008060.1 1305852 1306112 R KEGG: bur:Bcep18194_A4813 hypothetical protein; hypothetical protein complement(1305852..1306112) Burkholderia cenocepacia AU 1054 4092050 YP_621066.1 CDS Bcen_1186 NC_008060.1 1306389 1307564 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A4814 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1306389..1307564 Burkholderia cenocepacia AU 1054 4092051 YP_621067.1 CDS Bcen_1187 NC_008060.1 1307697 1308998 D TIGRFAM: citrate transporter; PFAM: Citrate transporter; KEGG: bur:Bcep18194_A4815 citrate transporter; citrate transporter 1307697..1308998 Burkholderia cenocepacia AU 1054 4092052 YP_621068.1 CDS Bcen_1188 NC_008060.1 1309037 1310203 D PFAM: acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_A4816 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 1309037..1310203 Burkholderia cenocepacia AU 1054 4092053 YP_621069.1 CDS Bcen_1189 NC_008060.1 1310264 1311007 D PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_A4817 transcriptional regulator, IclR family; IclR family transcriptional regulator 1310264..1311007 Burkholderia cenocepacia AU 1054 4092054 YP_621070.1 CDS Bcen_1190 NC_008060.1 1311109 1312464 R PFAM: Carbohydrate-binding family V/XII; KEGG: bur:Bcep18194_A4818 chitinase; chitinase complement(1311109..1312464) Burkholderia cenocepacia AU 1054 4092055 YP_621071.1 CDS Bcen_1191 NC_008060.1 1312805 1314514 R TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: bur:Bcep18194_A4821 precorrin-3B C17-methyltransferase region; precorrin-3B C(17)-methyltransferase complement(1312805..1314514) Burkholderia cenocepacia AU 1054 4092056 YP_621072.1 CDS Bcen_1192 NC_008060.1 1314511 1315245 R catalyzes the formation of precorrin-3 from precorrin-2; precorrin-2 C(20)-methyltransferase complement(1314511..1315245) Burkholderia cenocepacia AU 1054 4092057 YP_621073.1 CDS cobH NC_008060.1 1315242 1315868 R catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase complement(1315242..1315868) Burkholderia cenocepacia AU 1054 4092058 YP_621074.1 CDS Bcen_1194 NC_008060.1 1315861 1317309 R TIGRFAM: Precorrin-3B synthase; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like; nitrite and sulphite reductase 4Fe-4S region; KEGG: bur:Bcep18194_A4824 nitrite/sulfite reductase, hemoprotein beta subunit; precorrin-3B synthase complement(1315861..1317309) Burkholderia cenocepacia AU 1054 4092059 YP_621075.1 CDS Bcen_1195 NC_008060.1 1317622 1319007 D KEGG: bur:Bcep18194_A4826 precorrin-6y C5,15-methyltransferase, CbiE/CbiT TIGRFAM: Precorrin-6y C5,15-methyltransferase, subunit CbiE; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 1317622..1319007 Burkholderia cenocepacia AU 1054 4092061 YP_621076.1 CDS cbiD NC_008060.1 1319007 1320095 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1319007..1320095 Burkholderia cenocepacia AU 1054 4092062 YP_621077.1 CDS Bcen_1197 NC_008060.1 1320092 1320823 D CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1320092..1320823 Burkholderia cenocepacia AU 1054 4092063 YP_621078.1 CDS Bcen_1198 NC_008060.1 1320866 1321594 D KEGG: bur:Bcep18194_A4829 precorrin-4 C11-methyltransferase region TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 1320866..1321594 Burkholderia cenocepacia AU 1054 4092064 YP_621079.1 CDS Bcen_1199 NC_008060.1 1321712 1322890 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4832 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1321712..1322890) Burkholderia cenocepacia AU 1054 4092065 YP_621080.1 CDS Bcen_1200 NC_008060.1 1323021 1323551 D PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_A4833 transcriptional regulator, MarR family; MarR family transcriptional regulator 1323021..1323551 Burkholderia cenocepacia AU 1054 4093412 YP_621081.1 CDS Bcen_1201 NC_008060.1 1323659 1324918 D PFAM: transposase, mutator type; KEGG: bte:BTH_II0431 transposase, mutator family; transposase, mutator type 1323659..1324918 Burkholderia cenocepacia AU 1054 4093413 YP_621082.1 CDS Bcen_1202 NC_008060.1 1325441 1326151 D hypothetical protein 1325441..1326151 Burkholderia cenocepacia AU 1054 4093414 YP_621083.1 CDS Bcen_1203 NC_008060.1 1326945 1327649 R PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_A4836 glutathione S-transferase-like; glutathione S-transferase complement(1326945..1327649) Burkholderia cenocepacia AU 1054 4093415 YP_621084.1 CDS Bcen_1204 NC_008060.1 1327926 1329185 D PFAM: transposase, mutator type; KEGG: bte:BTH_II0431 transposase, mutator family; transposase, mutator type 1327926..1329185 Burkholderia cenocepacia AU 1054 4093416 YP_621085.1 CDS Bcen_1205 NC_008060.1 1329483 1330649 D PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_A4845 ABC transporter, periplasmic ligand binding protein; extracellular solute-binding protein 1329483..1330649 Burkholderia cenocepacia AU 1054 4093417 YP_621086.1 CDS Bcen_1206 NC_008060.1 1330699 1331778 D PFAM: ABC transporter related; TOBE; Transport-associated OB; SMART: ATPase; KEGG: bur:Bcep18194_A4846 ABC transporter, ATPase subunit; ABC transporter 1330699..1331778 Burkholderia cenocepacia AU 1054 4093418 YP_621087.1 CDS Bcen_1207 NC_008060.1 1332291 1332707 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4848 ABC transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 1332291..1332707 Burkholderia cenocepacia AU 1054 4093419 YP_621088.1 CDS Bcen_1208 NC_008060.1 1332707 1333630 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4848 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1332707..1333630 Burkholderia cenocepacia AU 1054 4093420 YP_621089.1 CDS Bcen_1209 NC_008060.1 1333678 1334181 D KEGG: bur:Bcep18194_A4849 hypothetical protein; hypothetical protein 1333678..1334181 Burkholderia cenocepacia AU 1054 4093421 YP_621090.1 CDS Bcen_1210 NC_008060.1 1334397 1334609 D KEGG: bur:Bcep18194_A4850 hypothetical protein; hypothetical protein 1334397..1334609 Burkholderia cenocepacia AU 1054 4093422 YP_621091.1 CDS Bcen_1211 NC_008060.1 1334828 1335862 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A4851 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(1334828..1335862) Burkholderia cenocepacia AU 1054 4093423 YP_621092.1 CDS Bcen_1212 NC_008060.1 1336053 1337243 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A4852 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1336053..1337243 Burkholderia cenocepacia AU 1054 4093424 YP_621093.1 CDS Bcen_1213 NC_008060.1 1337265 1338227 D PFAM: pyruvate carboxyltransferase; KEGG: bur:Bcep18194_A4853 pyruvate carboxyltransferase; pyruvate carboxyltransferase 1337265..1338227 Burkholderia cenocepacia AU 1054 4093425 YP_621094.1 CDS Bcen_1214 NC_008060.1 1338262 1338645 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A4854 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1338262..1338645 Burkholderia cenocepacia AU 1054 4093426 YP_621095.1 CDS Bcen_1215 NC_008060.1 1338877 1339704 D KEGG: bur:Bcep18194_A4855 esterase/lipase-like protein; esterase/lipase-like protein 1338877..1339704 Burkholderia cenocepacia AU 1054 4093427 YP_621096.1 CDS Bcen_1216 NC_008060.1 1339800 1340693 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4856 transcriptional regulator, LysR family; LysR family transcriptional regulator 1339800..1340693 Burkholderia cenocepacia AU 1054 4093428 YP_621097.1 CDS Bcen_1217 NC_008060.1 1340752 1342215 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4860 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1340752..1342215) Burkholderia cenocepacia AU 1054 4093429 YP_621098.1 CDS Bcen_1218 NC_008060.1 1342698 1343069 D PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: bur:Bcep18194_A4872 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 1342698..1343069 Burkholderia cenocepacia AU 1054 4093430 YP_621099.1 CDS Bcen_1219 NC_008060.1 1343306 1343761 D PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_A4873 transcriptional regulator, MarR family; MarR family transcriptional regulator 1343306..1343761 Burkholderia cenocepacia AU 1054 4093431 YP_621100.1 CDS Bcen_1220 NC_008060.1 1343814 1344530 R PFAM: GCN5-related N-acetyltransferase; FR47-like; KEGG: bur:Bcep18194_A4874 GCN5-related N-acetyltransferase; hypothetical protein complement(1343814..1344530) Burkholderia cenocepacia AU 1054 4093393 YP_621101.1 CDS Bcen_1221 NC_008060.1 1344699 1345028 R KEGG: bur:Bcep18194_A4879 hypothetical protein; hypothetical protein complement(1344699..1345028) Burkholderia cenocepacia AU 1054 4093394 YP_621102.1 CDS Bcen_1222 NC_008060.1 1345092 1345418 R KEGG: bur:Bcep18194_A4881 hypothetical protein; hypothetical protein complement(1345092..1345418) Burkholderia cenocepacia AU 1054 4093395 YP_621103.1 CDS Bcen_1223 NC_008060.1 1345484 1345903 R PFAM: OsmC-like protein; KEGG: bur:Bcep18194_A4882 OsmC-like protein; OsmC-like protein complement(1345484..1345903) Burkholderia cenocepacia AU 1054 4093396 YP_621104.1 CDS Bcen_1224 NC_008060.1 1345984 1346268 R hypothetical protein complement(1345984..1346268) Burkholderia cenocepacia AU 1054 4093397 YP_621105.1 CDS Bcen_1225 NC_008060.1 1346581 1347594 D KEGG: reu:Reut_C6008 hypothetical protein; hypothetical protein 1346581..1347594 Burkholderia cenocepacia AU 1054 4093398 YP_621106.1 CDS Bcen_1226 NC_008060.1 1348000 1350981 R PFAM: transposase Tn3; KEGG: xac:XACb0008 Tn5044 transposase; transposase Tn3 complement(1348000..1350981) Burkholderia cenocepacia AU 1054 4093399 YP_621107.1 CDS Bcen_1227 NC_008060.1 1350978 1352501 R PFAM: phage integrase; phage integrase-like SAM-like; KEGG: rso:RS01673 integrase/recombinase protein; phage integrase complement(1350978..1352501) Burkholderia cenocepacia AU 1054 4093400 YP_621108.1 CDS Bcen_1228 NC_008060.1 1353137 1353919 R KEGG: cps:CPS_4054 hypothetical protein; hypothetical protein complement(1353137..1353919) Burkholderia cenocepacia AU 1054 4093401 YP_621109.1 CDS Bcen_1229 NC_008060.1 1354104 1355375 R PFAM: amidohydrolase; KEGG: ppu:PP3194 hypothetical protein; amidohydrolase complement(1354104..1355375) Burkholderia cenocepacia AU 1054 4093402 YP_621110.1 CDS Bcen_1230 NC_008060.1 1355399 1356184 R PFAM: alpha/beta hydrolase fold; KEGG: ppu:PP3645 hydrolase, alpha/beta fold family; alpha/beta hydrolase complement(1355399..1356184) Burkholderia cenocepacia AU 1054 4093403 YP_621111.1 CDS Bcen_1231 NC_008060.1 1356181 1357062 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bbr:BB4132 enzyme; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(1356181..1357062) Burkholderia cenocepacia AU 1054 4093404 YP_621112.1 CDS Bcen_1232 NC_008060.1 1357183 1357941 D PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: atc:AGR_L_326 GntR-family transcriptional regulator; GntR family transcriptional regulator 1357183..1357941 Burkholderia cenocepacia AU 1054 4093405 YP_621113.1 CDS Bcen_1233 NC_008060.1 1359176 1360873 D PFAM: peptidase M4, thermolysin; Propeptide, peptidase M4 and M36; KEGG: bur:Bcep18194_C7164 peptidase M4, thermolysin; propeptide, peptidase M4 and M36 1359176..1360873 Burkholderia cenocepacia AU 1054 4093406 YP_621114.1 CDS Bcen_1234 NC_008060.1 1361306 1362148 D KEGG: mag:amb0666 hypothetical protein; hypothetical protein 1361306..1362148 Burkholderia cenocepacia AU 1054 4093407 YP_621115.1 CDS Bcen_1235 NC_008060.1 1362205 1363194 R KEGG: bur:Bcep18194_C7086 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein; ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein complement(1362205..1363194) Burkholderia cenocepacia AU 1054 4093408 YP_621116.1 CDS Bcen_1236 NC_008060.1 1363240 1363584 R KEGG: bur:Bcep18194_C7085 hypothetical protein; hypothetical protein complement(1363240..1363584) Burkholderia cenocepacia AU 1054 4093409 YP_621117.1 CDS Bcen_1237 NC_008060.1 1364076 1365260 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_C7084 outer membrane protein (porin); porin 1364076..1365260 Burkholderia cenocepacia AU 1054 4093410 YP_621118.1 CDS Bcen_1238 NC_008060.1 1365391 1366647 D PFAM: oxidoreductase, molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: bja:bll6121 probable sulfite oxidase; oxidoreductase, molybdopterin binding 1365391..1366647 Burkholderia cenocepacia AU 1054 4093411 YP_621119.1 CDS Bcen_1239 NC_008060.1 1366640 1367164 D PFAM: cytochrome c, class I; KEGG: bja:bll6120 sulfite oxidase cytochrome subunit; cytochrome c, class I 1366640..1367164 Burkholderia cenocepacia AU 1054 4092778 YP_621120.1 CDS Bcen_1240 NC_008060.1 1367235 1368422 D PFAM: luciferase-like; KEGG: bur:Bcep18194_C7083 flavin-dependent oxidoreductase; luciferase-like protein 1367235..1368422 Burkholderia cenocepacia AU 1054 4092779 YP_621121.1 CDS Bcen_1241 NC_008060.1 1368477 1369694 R PFAM: Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_C7082 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase complement(1368477..1369694) Burkholderia cenocepacia AU 1054 4092780 YP_621122.1 CDS Bcen_1242 NC_008060.1 1369853 1370740 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bps:BPSL1822 membrane protein; binding-protein-dependent transport system inner membrane protein complement(1369853..1370740) Burkholderia cenocepacia AU 1054 4092781 YP_621123.1 CDS Bcen_1243 NC_008060.1 1370737 1371735 R PFAM: ABC transporter related; SMART: ATPase; KEGG: ppu:PP0171 ABC transporter, ATP-binding protein; ABC transporter complement(1370737..1371735) Burkholderia cenocepacia AU 1054 4092782 YP_621124.1 CDS Bcen_1244 NC_008060.1 1371811 1372842 R KEGG: bpm:BURPS1710b_2032 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein complement(1371811..1372842) Burkholderia cenocepacia AU 1054 4092783 YP_621125.1 CDS Bcen_1245 NC_008060.1 1372891 1373817 R PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: xcb:XC_3456 taurine dioxygenase; taurine dioxygenase complement(1372891..1373817) Burkholderia cenocepacia AU 1054 4092784 YP_621126.1 CDS Bcen_1246 NC_008060.1 1374027 1375034 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nmu:Nmul_A1292 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1374027..1375034) Burkholderia cenocepacia AU 1054 4092785 YP_621127.1 CDS Bcen_1247 NC_008060.1 1375107 1375388 R hypothetical protein complement(1375107..1375388) Burkholderia cenocepacia AU 1054 4092786 YP_621128.1 CDS Bcen_1248 NC_008060.1 1376104 1376397 R KEGG: rsp:RSP_3082 hypothetical protein; hypothetical protein complement(1376104..1376397) Burkholderia cenocepacia AU 1054 4092787 YP_621129.1 CDS Bcen_1249 NC_008060.1 1376403 1376828 R PFAM: CBS; KEGG: CBS domains; hypothetical protein complement(1376403..1376828) Burkholderia cenocepacia AU 1054 4092788 YP_621130.1 CDS Bcen_1251 NC_008060.1 1378120 1378404 D PFAM: helix-turn-helix motif; KEGG: nwi:Nwi_0830 transcriptional regulator, XRE family; XRE family transcriptional regulator 1378120..1378404 Burkholderia cenocepacia AU 1054 4092790 YP_621131.1 CDS Bcen_1252 NC_008060.1 1378394 1379698 D PFAM: HipA-like-like; KEGG: neu:NE1310 possible HipA protein; HipA-like protein 1378394..1379698 Burkholderia cenocepacia AU 1054 4092791 YP_621132.1 CDS Bcen_1253 NC_008060.1 1379768 1380733 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C7081 short-chain dehydrogenase/reductase SDR; oxidoreductase complement(1379768..1380733) Burkholderia cenocepacia AU 1054 4092792 YP_621133.1 CDS Bcen_1254 NC_008060.1 1380867 1381793 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_C7080 transcriptional regulator, AraC family; AraC family transcriptional regulator 1380867..1381793 Burkholderia cenocepacia AU 1054 4092793 YP_621134.1 CDS Bcen_1255 NC_008060.1 1381937 1382467 R PFAM: OsmC-like protein; KEGG: bur:Bcep18194_C7506 hypothetical protein; OsmC-like protein complement(1381937..1382467) Burkholderia cenocepacia AU 1054 4092794 YP_621135.1 CDS Bcen_1256 NC_008060.1 1382528 1383598 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20620 sugar uptake ABC transporter periplasmic solute-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator complement(1382528..1383598) Burkholderia cenocepacia AU 1054 4092795 YP_621136.1 CDS Bcen_1257 NC_008060.1 1383765 1384826 R PFAM: inner-membrane translocator; KEGG: pfo:Pfl_2339 inner-membrane translocator; inner-membrane translocator complement(1383765..1384826) Burkholderia cenocepacia AU 1054 4092796 YP_621137.1 CDS Bcen_1258 NC_008060.1 1384823 1386385 R PFAM: ABC transporter related; SMART: ATPase; KEGG: psp:PSPPH_2279 ABC transporter protein, ATP binding component; ABC transporter complement(1384823..1386385) Burkholderia cenocepacia AU 1054 4092797 YP_621138.1 CDS Bcen_1259 NC_008060.1 1386488 1387870 R KEGG: pfo:Pfl_2800 hypothetical protein; coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein complement(1386488..1387870) Burkholderia cenocepacia AU 1054 4090872 YP_621139.1 CDS Bcen_1260 NC_008060.1 1387897 1388664 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_5023 amino acid ABC transporter, permease protein; amino acid ABC transporter permease complement(1387897..1388664) Burkholderia cenocepacia AU 1054 4090873 YP_621140.1 CDS Bcen_1261 NC_008060.1 1388661 1389395 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4293 histidine ABC transporter permease; amino acid ABC transporter permease complement(1388661..1389395) Burkholderia cenocepacia AU 1054 4090874 YP_621141.1 CDS Bcen_1262 NC_008060.1 1389400 1390212 R PFAM: extracellular solute-binding protein, family 3; KEGG: atc:AGR_C_4294 arginine/ornithine-binding protein aotJ; extracellular solute-binding protein complement(1389400..1390212) Burkholderia cenocepacia AU 1054 4090875 YP_621142.1 CDS Bcen_1263 NC_008060.1 1390381 1391688 R KEGG: nfa:nfa5010 monooxygenase; monooxygenase complement(1390381..1391688) Burkholderia cenocepacia AU 1054 4090876 YP_621143.1 CDS Bcen_1264 NC_008060.1 1392021 1393190 D PFAM: luciferase-like; KEGG: luciferase-like monooxygenase superfamily; luciferase-like protein 1392021..1393190 Burkholderia cenocepacia AU 1054 4090877 YP_621144.1 CDS Bcen_1265 NC_008060.1 1393187 1393762 D PFAM: GCN5-related N-acetyltransferase; KEGG: sar:SAR2491 acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 1393187..1393762 Burkholderia cenocepacia AU 1054 4090878 YP_621145.1 CDS Bcen_1266 NC_008060.1 1393840 1395480 D PFAM: extracellular solute-binding protein, family 5; KEGG: eca:ECA0448 ABC transporter extracellular solute binding protein; extracellular solute-binding protein 1393840..1395480 Burkholderia cenocepacia AU 1054 4090879 YP_621146.1 CDS Bcen_1267 NC_008060.1 1395542 1396552 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0447 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1395542..1396552 Burkholderia cenocepacia AU 1054 4090880 YP_621147.1 CDS Bcen_1268 NC_008060.1 1396566 1397435 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr1603 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1396566..1397435 Burkholderia cenocepacia AU 1054 4090881 YP_621148.1 CDS Bcen_1269 NC_008060.1 1397432 1399111 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter; SMART: ATPase; KEGG: eca:ECA0445 ABC transporter ATP binding protein; ABC transporter 1397432..1399111 Burkholderia cenocepacia AU 1054 4090882 YP_621149.1 CDS Bcen_1270 NC_008060.1 1399234 1399446 R KEGG: bur:Bcep18194_C7067 hypothetical protein; hypothetical protein complement(1399234..1399446) Burkholderia cenocepacia AU 1054 4090883 YP_621150.1 CDS Bcen_1271 NC_008060.1 1399443 1399862 R KEGG: bur:Bcep18194_C7066 hypothetical protein; hypothetical protein complement(1399443..1399862) Burkholderia cenocepacia AU 1054 4090884 YP_621151.1 CDS Bcen_1272 NC_008060.1 1400036 1400794 D PFAM: protein of unknown function DUF1275; KEGG: bur:Bcep18194_C7065 protein of unknown function DUF1275; hypothetical protein 1400036..1400794 Burkholderia cenocepacia AU 1054 4090885 YP_621152.1 CDS Bcen_1273 NC_008060.1 1400891 1401076 D PFAM: CopG family transcriptional regulator; KEGG: bur:Bcep18194_C7064 helix-turn-helix protein, CopG family; CopG family transcriptional regulator 1400891..1401076 Burkholderia cenocepacia AU 1054 4090886 YP_621153.1 CDS Bcen_1274 NC_008060.1 1401144 1401980 R KEGG: bur:Bcep18194_C7063 spermidine synthase-like protein; spermidine synthase-like protein complement(1401144..1401980) Burkholderia cenocepacia AU 1054 4090887 YP_621154.1 CDS Bcen_1275 NC_008060.1 1402048 1402401 R TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: bur:Bcep18194_C7062 PhnA protein; alkylphosphonate utilization operon protein PhnA complement(1402048..1402401) Burkholderia cenocepacia AU 1054 4090888 YP_621155.1 CDS Bcen_1276 NC_008060.1 1402676 1403026 D PFAM: phosphocarrier HPr protein; KEGG: bur:Bcep18194_C7060 HPrNtr; phosphocarrier HPr protein 1402676..1403026 Burkholderia cenocepacia AU 1054 4090889 YP_621156.1 CDS Bcen_1277 NC_008060.1 1403092 1403313 D KEGG: bur:Bcep18194_C7059 hypothetical protein; hypothetical protein 1403092..1403313 Burkholderia cenocepacia AU 1054 4090890 YP_621157.1 CDS Bcen_1278 NC_008060.1 1403436 1404002 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C7056 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1403436..1404002 Burkholderia cenocepacia AU 1054 4090891 YP_621158.1 CDS Bcen_1279 NC_008060.1 1404270 1404683 R KEGG: bur:Bcep18194_C7055 hypothetical protein; hypothetical protein complement(1404270..1404683) Burkholderia cenocepacia AU 1054 4090892 YP_621159.1 CDS Bcen_1280 NC_008060.1 1405211 1405921 D PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_C7054 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1405211..1405921 Burkholderia cenocepacia AU 1054 4090893 YP_621160.1 CDS Bcen_1281 NC_008060.1 1405989 1407674 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bpm:BURPS1710b_1798 TrpC; RND efflux system, outer membrane lipoprotein, NodT complement(1405989..1407674) Burkholderia cenocepacia AU 1054 4090894 YP_621161.1 CDS Bcen_1282 NC_008060.1 1407674 1409266 R TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bpm:BURPS1710b_1800 drug resistance transporter, EmrB/QacA family; EmrB/QacA family drug resistance transporter complement(1407674..1409266) Burkholderia cenocepacia AU 1054 4090895 YP_621162.1 CDS Bcen_1283 NC_008060.1 1409352 1410779 R PFAM: secretion protein HlyD; KEGG: bma:BMA0883 multidrug resistance protein; secretion protein HlyD complement(1409352..1410779) Burkholderia cenocepacia AU 1054 4090896 YP_621163.1 CDS Bcen_1284 NC_008060.1 1410813 1411133 D hypothetical protein 1410813..1411133 Burkholderia cenocepacia AU 1054 4090897 YP_621164.1 CDS Bcen_1285 NC_008060.1 1411239 1411796 D PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_B2090 NUDIX hydrolase; NUDIX hydrolase 1411239..1411796 Burkholderia cenocepacia AU 1054 4090898 YP_621165.1 CDS Bcen_1286 NC_008060.1 1411771 1412073 R KEGG: bur:Bcep18194_C7053 hypothetical protein; hypothetical protein complement(1411771..1412073) Burkholderia cenocepacia AU 1054 4090899 YP_621166.1 CDS Bcen_1287 NC_008060.1 1412369 1412779 R PFAM: transport-associated; KEGG: reu:Reut_B4475 hypothetical protein; transport-associated complement(1412369..1412779) Burkholderia cenocepacia AU 1054 4090900 YP_621167.1 CDS Bcen_1288 NC_008060.1 1413022 1413528 R PFAM: protein of unknown function DUF1452; KEGG: bur:Bcep18194_C6797 protein of unknown function DUF1452; hypothetical protein complement(1413022..1413528) Burkholderia cenocepacia AU 1054 4090901 YP_621168.1 CDS Bcen_1289 NC_008060.1 1413687 1414427 R KEGG: sas:SAS0037 hypothetical protein; hypothetical protein complement(1413687..1414427) Burkholderia cenocepacia AU 1054 4090902 YP_621169.1 CDS Bcen_1290 NC_008060.1 1414555 1414938 R PFAM: protein of unknown function DUF305; KEGG: membrane protein; hypothetical protein complement(1414555..1414938) Burkholderia cenocepacia AU 1054 4090903 YP_621170.1 CDS Bcen_1291 NC_008060.1 1415271 1417106 D catalyzes the formation of acetate from pyruvate; thiamine pyrophosphate protein 1415271..1417106 Burkholderia cenocepacia AU 1054 4090904 YP_621171.1 CDS Bcen_1292 NC_008060.1 1417390 1418454 D PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; KEGG: bps:BPSL0723 cytochrome c oxidase polypeptide II precursor; cytochrome c oxidase, subunit II 1417390..1418454 Burkholderia cenocepacia AU 1054 4090905 YP_621172.1 CDS Bcen_1293 NC_008060.1 1418468 1421107 D PFAM: cytochrome c oxidase, subunit III; cytochrome c oxidase, subunit I; KEGG: bps:BPSL0722 cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 1418468..1421107 Burkholderia cenocepacia AU 1054 4090906 YP_621173.1 CDS Bcen_1294 NC_008060.1 1421496 1423079 D PFAM: cytochrome c, class I; KEGG: bpm:BURPS1710b_0943 cytochrome c family protein; cytochrome c, class I 1421496..1423079 Burkholderia cenocepacia AU 1054 4090907 YP_621174.1 CDS Bcen_1295 NC_008060.1 1423170 1423535 R KEGG: bps:BPSL0174 phage DNA-binding protein; transcriptional regulator complement(1423170..1423535) Burkholderia cenocepacia AU 1054 4090908 YP_621175.1 CDS Bcen_1296 NC_008060.1 1423580 1425040 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: rso:RSc3208 drug efflux lipoprotein; RND efflux system, outer membrane lipoprotein, NodT complement(1423580..1425040) Burkholderia cenocepacia AU 1054 4090909 YP_621176.1 CDS Bcen_1297 NC_008060.1 1425118 1425735 D PFAM: regulatory protein, TetR; KEGG: rso:RSc3207 transcription regulator protein; TetR family transcriptional regulator 1425118..1425735 Burkholderia cenocepacia AU 1054 4090910 YP_621177.1 CDS Bcen_1298 NC_008060.1 1425818 1426942 D PFAM: secretion protein HlyD; KEGG: rso:RSc3206 probable transport lipoprotein; secretion protein HlyD 1425818..1426942 Burkholderia cenocepacia AU 1054 4091393 YP_621178.1 CDS Bcen_1299 NC_008060.1 1426939 1430079 D PFAM: acriflavin resistance protein; KEGG: rso:RSc3205 probable transmembrane drug efflux protein; acriflavin resistance protein 1426939..1430079 Burkholderia cenocepacia AU 1054 4091394 YP_621179.1 CDS Bcen_1300 NC_008060.1 1430115 1430921 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc3209 short chain dehydrogenase; short chain dehydrogenase 1430115..1430921 Burkholderia cenocepacia AU 1054 4091395 YP_621180.1 CDS Bcen_1301 NC_008060.1 1431054 1432901 R PFAM: Tannase and feruloyl esterase; KEGG: bur:Bcep18194_B0055 feruloyl esterase; feruloyl esterase complement(1431054..1432901) Burkholderia cenocepacia AU 1054 4091396 YP_621181.1 CDS Bcen_1302 NC_008060.1 1432991 1433389 R PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_C7050 endoribonuclease L-PSP; endoribonuclease L-PSP complement(1432991..1433389) Burkholderia cenocepacia AU 1054 4091397 YP_621182.1 CDS benD NC_008060.1 1433479 1434255 R catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase complement(1433479..1434255) Burkholderia cenocepacia AU 1054 4091398 YP_621183.1 CDS Bcen_1304 NC_008060.1 1434252 1435274 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; FAD-binding 9, siderophore-interacting; KEGG: bur:Bcep18194_C7048 ferredoxin/oxidoreductase FAD/NAD(P)-binding; oxidoreductase FAD/NAD(P)-binding protein complement(1434252..1435274) Burkholderia cenocepacia AU 1054 4091399 YP_621184.1 CDS Bcen_1305 NC_008060.1 1435314 1435688 R PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: bur:Bcep18194_C7047 2-chlorobenzoate 1,2-dioxygenase; 2-chlorobenzoate 1,2-dioxygenase complement(1435314..1435688) Burkholderia cenocepacia AU 1054 4091400 YP_621185.1 CDS Bcen_1306 NC_008060.1 1435799 1437157 R PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_C7046 ring hydroxylating dioxygenase, alpha subunit; Rieske (2Fe-2S) protein complement(1435799..1437157) Burkholderia cenocepacia AU 1054 4091401 YP_621186.1 CDS Bcen_1307 NC_008060.1 1437275 1438225 R KEGG: bur:Bcep18194_C7045 catechol 1,2-dioxygenase TIGRFAM: Catechol 1,2-dioxygenase, proteobacteria; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase-like; catechol 1,2-dioxygenase complement(1437275..1438225) Burkholderia cenocepacia AU 1054 4091402 YP_621187.1 CDS Bcen_1308 NC_008060.1 1438866 1440347 R PFAM: transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A4972 transcriptional regulator, winged helix family; transcriptional regulator complement(1438866..1440347) Burkholderia cenocepacia AU 1054 4091403 YP_621188.1 CDS Bcen_1309 NC_008060.1 1440351 1441223 R PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: reu:Reut_B3478 phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis PhzC/PhzF protein complement(1440351..1441223) Burkholderia cenocepacia AU 1054 4091404 YP_621189.1 CDS Bcen_1310 NC_008060.1 1441427 1442281 D PFAM: helix-turn-helix, AraC type; KEGG: sme:SMa0319 AraC-type regulator; AraC family transcriptional regulator 1441427..1442281 Burkholderia cenocepacia AU 1054 4091405 YP_621190.1 CDS Bcen_1311 NC_008060.1 1442653 1444122 D PFAM: aldehyde dehydrogenase; KEGG: pfo:Pfl_2977 aldehyde dehydrogenase; benzaldehyde dehydrogenase (NAD+) 1442653..1444122 Burkholderia cenocepacia AU 1054 4091406 YP_621191.1 CDS Bcen_1312 NC_008060.1 1444137 1445264 D PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: nmu:Nmul_A1473 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase 1444137..1445264 Burkholderia cenocepacia AU 1054 4091407 YP_621192.1 CDS Bcen_1313 NC_008060.1 1445407 1446588 D PFAM: helix-turn-helix, Fis-type; KEGG: pfo:Pfl_2976 possible transcriptional regulator, fis family; helix-turn-helix, Fis-type 1445407..1446588 Burkholderia cenocepacia AU 1054 4091408 YP_621193.1 CDS Bcen_1314 NC_008060.1 1446727 1447629 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7040 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1446727..1447629) Burkholderia cenocepacia AU 1054 4091409 YP_621194.1 CDS Bcen_1315 NC_008060.1 1447788 1448564 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C7039 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1447788..1448564 Burkholderia cenocepacia AU 1054 4091410 YP_621195.1 CDS Bcen_1316 NC_008060.1 1448593 1449795 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7038 major facilitator superfamily (MFS_1) transporter; sugar efflux transporter complement(1448593..1449795) Burkholderia cenocepacia AU 1054 4091411 YP_621196.1 CDS Bcen_1317 NC_008060.1 1449998 1450672 D TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_C7037 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase 1449998..1450672 Burkholderia cenocepacia AU 1054 4091412 YP_621197.1 CDS Bcen_1318 NC_008060.1 1450734 1450988 D hypothetical protein 1450734..1450988 Burkholderia cenocepacia AU 1054 4091413 YP_621198.1 CDS Bcen_1319 NC_008060.1 1451312 1452274 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: plu:plu3986 hypothetical protein; methyltransferase type 12 1451312..1452274 Burkholderia cenocepacia AU 1054 4091414 YP_621199.1 CDS Bcen_1320 NC_008060.1 1452288 1453382 D hypothetical protein 1452288..1453382 Burkholderia cenocepacia AU 1054 4091415 YP_621200.1 CDS Bcen_1321 NC_008060.1 1453395 1454450 D PFAM: Rieske [2Fe-2S] region; KEGG: mpa:MAP2343c hypothetical protein; Rieske (2Fe-2S) protein 1453395..1454450 Burkholderia cenocepacia AU 1054 4091416 YP_621201.1 CDS Bcen_1322 NC_008060.1 1454447 1455499 D PFAM: Rieske [2Fe-2S] region; KEGG: nfa:nfa11790 hypothetical protein; Rieske (2Fe-2S) protein 1454447..1455499 Burkholderia cenocepacia AU 1054 4091417 YP_621202.1 CDS Bcen_1323 NC_008060.1 1455534 1456241 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(1455534..1456241) Burkholderia cenocepacia AU 1054 4091418 YP_621203.1 CDS Bcen_1324 NC_008060.1 1456334 1456627 R KEGG: bur:Bcep18194_C7036 hypothetical protein; hypothetical protein complement(1456334..1456627) Burkholderia cenocepacia AU 1054 4091419 YP_621204.1 CDS Bcen_1325 NC_008060.1 1456745 1457449 D PFAM: MgtC/SapB transporter; KEGG: mgtC; MgtC family membrane protein; MgtC/SapB transporter 1456745..1457449 Burkholderia cenocepacia AU 1054 4091420 YP_621205.1 CDS Bcen_1326 NC_008060.1 1457500 1457769 D KEGG: bur:Bcep18194_C7035 hypothetical protein; hypothetical protein 1457500..1457769 Burkholderia cenocepacia AU 1054 4091421 YP_621206.1 CDS Bcen_1327 NC_008060.1 1457766 1459964 D PFAM: phospholipase D/Transphosphatidylase; KEGG: bps:BPSS1381 transmembrane phospholipase protein; phospholipase D/transphosphatidylase 1457766..1459964 Burkholderia cenocepacia AU 1054 4091422 YP_621207.1 CDS Bcen_1328 NC_008060.1 1459955 1460746 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase 1459955..1460746 Burkholderia cenocepacia AU 1054 4091423 YP_621208.1 CDS Bcen_1329 NC_008060.1 1460776 1461264 D KEGG: bps:BPSS1383 hypothetical protein; hypothetical protein 1460776..1461264 Burkholderia cenocepacia AU 1054 4091424 YP_621209.1 CDS Bcen_1330 NC_008060.1 1461421 1464813 D PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; KEGG: bur:Bcep18194_C7034 alpha amylase like protein; alpha amylase 1461421..1464813 Burkholderia cenocepacia AU 1054 4091425 YP_621210.1 CDS Bcen_1331 NC_008060.1 1464810 1468223 D KEGG: bur:Bcep18194_C7033 glycoside hydrolase, family 16 TIGRFAM: Trehalose synthase-like; Trehalose synthase/probable maltokinase-like; PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; trehalose synthase-like protein 1464810..1468223 Burkholderia cenocepacia AU 1054 4091426 YP_621211.1 CDS Bcen_1332 NC_008060.1 1468220 1470430 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 1468220..1470430 Burkholderia cenocepacia AU 1054 4091427 YP_621212.1 CDS Bcen_1333 NC_008060.1 1470463 1472580 D KEGG: bur:Bcep18194_C7031 glycogen debranching enzyme GlgX TIGRFAM: Glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13-like; alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; glycogen debranching protein GlgX 1470463..1472580 Burkholderia cenocepacia AU 1054 4091428 YP_621213.1 CDS Bcen_1334 NC_008060.1 1472589 1474460 D KEGG: bur:Bcep18194_C7030 glycoside hydrolase, family 13 TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13-like; alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; malto-oligosyltrehalose trehalohydrolase 1472589..1474460 Burkholderia cenocepacia AU 1054 4091429 YP_621214.1 CDS Bcen_1335 NC_008060.1 1474457 1476679 D KEGG: bur:Bcep18194_C7029 4-alpha-glucanotransferase TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; 4-alpha-glucanotransferase 1474457..1476679 Burkholderia cenocepacia AU 1054 4091430 YP_621215.1 CDS Bcen_1336 NC_008060.1 1476676 1479441 D KEGG: bur:Bcep18194_C7028 maltooligosyl trehalose synthase TIGRFAM: Malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; malto-oligosyltrehalose synthase 1476676..1479441 Burkholderia cenocepacia AU 1054 4091431 YP_621216.1 CDS Bcen_1337 NC_008060.1 1479569 1479853 D hypothetical protein 1479569..1479853 Burkholderia cenocepacia AU 1054 4091931 YP_621217.1 CDS Bcen_1338 NC_008060.1 1479912 1481225 D PFAM: phosphatidylserine decarboxylase-related; KEGG: bma:BMAA1997 phosphatidylserine decarboxylase; phosphatidylserine decarboxylase 1479912..1481225 Burkholderia cenocepacia AU 1054 4091932 YP_621218.1 CDS Bcen_1339 NC_008060.1 1481248 1481493 R KEGG: bur:Bcep18194_C7026 hypothetical protein; hypothetical protein complement(1481248..1481493) Burkholderia cenocepacia AU 1054 4091933 YP_621219.1 CDS Bcen_1340 NC_008060.1 1481783 1482115 R KEGG: bur:Bcep18194_C7025 hypothetical protein; hypothetical protein complement(1481783..1482115) Burkholderia cenocepacia AU 1054 4091934 YP_621220.1 CDS Bcen_1341 NC_008060.1 1482120 1482668 R TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI; KEGG: gvi:glr2813 probable protease; peptidase C56, PfpI complement(1482120..1482668) Burkholderia cenocepacia AU 1054 4091935 YP_621221.1 CDS Bcen_1342 NC_008060.1 1482917 1483282 R KEGG: bur:Bcep18194_C7024 hypothetical protein; hypothetical protein complement(1482917..1483282) Burkholderia cenocepacia AU 1054 4091936 YP_621222.1 CDS Bcen_1343 NC_008060.1 1483368 1483817 R KEGG: mbo:Mb1097c PE-PGRS family protein; hypothetical protein complement(1483368..1483817) Burkholderia cenocepacia AU 1054 4091937 YP_621223.1 CDS Bcen_1344 NC_008060.1 1483975 1484343 D KEGG: bte:BTH_II2289 hypothetical protein; hypothetical protein 1483975..1484343 Burkholderia cenocepacia AU 1054 4091938 YP_621224.1 CDS Bcen_1345 NC_008060.1 1484398 1485720 D PFAM: sodium/hydrogen exchanger; KEGG: Na+/H+ antiporter-like protein; sodium/hydrogen exchanger 1484398..1485720 Burkholderia cenocepacia AU 1054 4091939 YP_621225.1 CDS Bcen_1346 NC_008060.1 1485725 1488535 R PFAM: ATP dependent DNA ligase-like; ATP dependent DNA ligase; KEGG: reu:Reut_B5079 ATP dependent DNA ligase, C-terminal:ATP dependent DNA ligase, central; ATP dependent DNA ligase complement(1485725..1488535) Burkholderia cenocepacia AU 1054 4091940 YP_621226.1 CDS Bcen_1347 NC_008060.1 1488605 1489624 R PFAM: Ku; KEGG: Ku70/Ku80 beta-barrel domain protein; Ku domain-containing protein complement(1488605..1489624) Burkholderia cenocepacia AU 1054 4091941 YP_621227.1 CDS katE NC_008060.1 1489719 1491833 R Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; hydroperoxidase II complement(1489719..1491833) Burkholderia cenocepacia AU 1054 4091942 YP_621228.1 CDS Bcen_1349 NC_008060.1 1491961 1492347 R KEGG: bur:Bcep18194_C7022 hypothetical protein; hypothetical protein complement(1491961..1492347) Burkholderia cenocepacia AU 1054 4091943 YP_621229.1 CDS Bcen_1350 NC_008060.1 1492344 1492505 R PFAM: protein of unknown function DUF1328; KEGG: bur:Bcep18194_C7021 protein of unknown function DUF1328; hypothetical protein complement(1492344..1492505) Burkholderia cenocepacia AU 1054 4091944 YP_621230.1 CDS Bcen_1351 NC_008060.1 1492552 1492740 R KEGG: bur:Bcep18194_C7020 hypothetical protein; hypothetical protein complement(1492552..1492740) Burkholderia cenocepacia AU 1054 4091945 YP_621231.1 CDS Bcen_1352 NC_008060.1 1492813 1494246 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(1492813..1494246) Burkholderia cenocepacia AU 1054 4091946 YP_621232.1 CDS Bcen_1353 NC_008060.1 1494478 1494987 R PFAM: protein of unknown function DUF892; KEGG: YciE; hypothetical protein complement(1494478..1494987) Burkholderia cenocepacia AU 1054 4091947 YP_621233.1 CDS Bcen_1354 NC_008060.1 1495131 1495442 R KEGG: bps:BPSS2225 hypothetical protein; hypothetical protein complement(1495131..1495442) Burkholderia cenocepacia AU 1054 4091948 YP_621234.1 CDS Bcen_1355 NC_008060.1 1495439 1495693 R KEGG: ava:Ava_1781 hypothetical protein; hypothetical protein complement(1495439..1495693) Burkholderia cenocepacia AU 1054 4091949 YP_621235.1 CDS Bcen_1356 NC_008060.1 1495886 1496191 R KEGG: bur:Bcep18194_C7017 hypothetical protein; hypothetical protein complement(1495886..1496191) Burkholderia cenocepacia AU 1054 4091950 YP_621236.1 CDS Bcen_1357 NC_008060.1 1496359 1496613 D KEGG: bur:Bcep18194_C7016 hypothetical protein; hypothetical protein 1496359..1496613 Burkholderia cenocepacia AU 1054 4091951 YP_621237.1 CDS Bcen_1358 NC_008060.1 1496705 1497136 D PFAM: CBS; KEGG: bur:Bcep18194_C7015 CBS domain containing membrane protein; hypothetical protein 1496705..1497136 Burkholderia cenocepacia AU 1054 4091952 YP_621238.1 CDS Bcen_1359 NC_008060.1 1497229 1497711 D PFAM: PRC-barrel; KEGG: PRC-barrel domain protein; PRC-barrel protein 1497229..1497711 Burkholderia cenocepacia AU 1054 4091953 YP_621239.1 CDS Bcen_1360 NC_008060.1 1497831 1498724 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rso:RS03073 probable transcription regulator protein; LysR family transcriptional regulator complement(1497831..1498724) Burkholderia cenocepacia AU 1054 4091954 YP_621240.1 CDS Bcen_1361 NC_008060.1 1498918 1499187 D KEGG: hypothetical protein; hypothetical protein 1498918..1499187 Burkholderia cenocepacia AU 1054 4091955 YP_621241.1 CDS Bcen_1362 NC_008060.1 1499223 1500434 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc0207 transporter transmembrane protein; major facilitator transporter 1499223..1500434 Burkholderia cenocepacia AU 1054 4091956 YP_621242.1 CDS Bcen_1363 NC_008060.1 1500465 1500944 R PFAM: response regulator receiver; KEGG: CheY-like response regulator domain; response regulator receiver protein complement(1500465..1500944) Burkholderia cenocepacia AU 1054 4091957 YP_621243.1 CDS Bcen_1364 NC_008060.1 1501178 1501849 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bps:BPSS2233 DNA glycosylase; phage SPO1 DNA polymerase-related protein 1501178..1501849 Burkholderia cenocepacia AU 1054 4091958 YP_621244.1 CDS Bcen_1365 NC_008060.1 1501846 1503138 D PFAM: natural resistance-associated macrophage protein; KEGG: bps:BPSS2234 transport related, membrane protein; natural resistance-associated macrophage protein 1501846..1503138 Burkholderia cenocepacia AU 1054 4091959 YP_621245.1 CDS Bcen_1366 NC_008060.1 1503235 1503846 R KEGG: hypothetical protein; hypothetical protein complement(1503235..1503846) Burkholderia cenocepacia AU 1054 4091960 YP_621246.1 CDS Bcen_1367 NC_008060.1 1503906 1504520 R KEGG: hypothetical protein; hypothetical protein complement(1503906..1504520) Burkholderia cenocepacia AU 1054 4091961 YP_621247.1 CDS Bcen_1368 NC_008060.1 1504555 1505412 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: oxidoreductase (short-chain dehydrogenase:reductase family); short-chain dehydrogenase/reductase SDR complement(1504555..1505412) Burkholderia cenocepacia AU 1054 4091962 YP_621248.1 CDS Bcen_1369 NC_008060.1 1505534 1506100 R KEGG: hypothetical protein; hypothetical protein complement(1505534..1506100) Burkholderia cenocepacia AU 1054 4091963 YP_621249.1 CDS Bcen_1370 NC_008060.1 1506162 1506461 R KEGG: hypothetical protein; hypothetical protein complement(1506162..1506461) Burkholderia cenocepacia AU 1054 4091964 YP_621250.1 CDS Bcen_1371 NC_008060.1 1506489 1507517 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oxidoreductase, short chain dehydrogenase/reductase family; short chain dehydrogenase complement(1506489..1507517) Burkholderia cenocepacia AU 1054 4091965 YP_621251.1 CDS Bcen_1372 NC_008060.1 1507548 1507958 R PFAM: transport-associated; KEGG: bps:BPSS2243 lipoprotein; transport-associated complement(1507548..1507958) Burkholderia cenocepacia AU 1054 4091966 YP_621252.1 CDS Bcen_1373 NC_008060.1 1508203 1509522 D PFAM: glycosyl transferase, group 1; KEGG: glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 1508203..1509522 Burkholderia cenocepacia AU 1054 4091967 YP_621253.1 CDS Bcen_1374 NC_008060.1 1509522 1510568 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: rfbB; NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 1509522..1510568 Burkholderia cenocepacia AU 1054 4091968 YP_621254.1 CDS Bcen_1375 NC_008060.1 1510609 1512915 R PFAM: response regulator receiver; ATP-binding region, ATPase-like; histidine kinase A-like; PAS fold-4; PAS fold; SMART: PAS; KEGG: bur:Bcep18194_C7014 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase complement(1510609..1512915) Burkholderia cenocepacia AU 1054 4091969 YP_621255.1 CDS Bcen_1376 NC_008060.1 1513035 1513730 D KEGG: hypothetical protein; hypothetical protein 1513035..1513730 Burkholderia cenocepacia AU 1054 4091776 YP_621256.1 CDS Bcen_1377 NC_008060.1 1513769 1514632 D PFAM: glycosyl transferase, family 2; KEGG: glycosyl transferase, group 2 family protein; glycosyl transferase family protein 1513769..1514632 Burkholderia cenocepacia AU 1054 4091777 YP_621257.1 CDS Bcen_1378 NC_008060.1 1514650 1516017 R PFAM: response regulator receiver; sigma-54 factor, interaction region; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: bur:Bcep18194_C7013 two component, sigma54 specific, transcriptional regulator, fis family; Fis family transcriptional regulator complement(1514650..1516017) Burkholderia cenocepacia AU 1054 4091778 YP_621258.1 CDS Bcen_1379 NC_008060.1 1516233 1517387 D PFAM: sigma-54 factor, interaction region; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: sigma-54 interacting transcriptional regulator; sigma-54 dependent trancsriptional regulator 1516233..1517387 Burkholderia cenocepacia AU 1054 4091779 YP_621259.1 CDS Bcen_1380 NC_008060.1 1517425 1518375 R PFAM: glycosyl transferase, group 1; KEGG: rfaG; glycosyltransferase; group 1 glycosyl transferase complement(1517425..1518375) Burkholderia cenocepacia AU 1054 4091780 YP_621260.1 CDS Bcen_1381 NC_008060.1 1518365 1519453 R PFAM: glycosyl transferase, family 9; KEGG: bps:BPSS2252 LPS biosynthesis related glycosyltransferase; glycosyl transferase family protein complement(1518365..1519453) Burkholderia cenocepacia AU 1054 4091781 YP_621261.1 CDS Bcen_1382 NC_008060.1 1519450 1520451 R PFAM: glycosyl transferase, family 2; KEGG: glycosyl transferase, group 2 family protein; glycosyl transferase family protein complement(1519450..1520451) Burkholderia cenocepacia AU 1054 4091782 YP_621262.1 CDS Bcen_1383 NC_008060.1 1520448 1522193 R PFAM: Carbamoyltransferase; KEGG: carbamoyltransferase family protein; carbamoyltransferase complement(1520448..1522193) Burkholderia cenocepacia AU 1054 4091783 YP_621263.1 CDS Bcen_1384 NC_008060.1 1522197 1523402 R PFAM: glycosyl transferase, family 9; KEGG: reu:Reut_B4386 lipopolysaccharide heptosyltransferase II; glycosyl transferase family protein complement(1522197..1523402) Burkholderia cenocepacia AU 1054 4091784 YP_621264.1 CDS Bcen_1385 NC_008060.1 1523399 1524010 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; Histidinol-phosphate phosphatase; HAD-superfamily hydrolase subfamily IIIA; KEGG: HAD-superfamily hydrolase; histidinol-phosphate phosphatase complement(1523399..1524010) Burkholderia cenocepacia AU 1054 4091785 YP_621265.1 CDS Bcen_1386 NC_008060.1 1524001 1524756 R PFAM: short-chain dehydrogenase/reductase SDR; Male sterility-like; KEGG: oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR complement(1524001..1524756) Burkholderia cenocepacia AU 1054 4091786 YP_621266.1 CDS Bcen_1387 NC_008060.1 1524947 1525390 R KEGG: hypothetical protein; hypothetical protein complement(1524947..1525390) Burkholderia cenocepacia AU 1054 4091787 YP_621267.1 CDS Bcen_1388 NC_008060.1 1525416 1528181 R PFAM: ABC transporter, transmembrane region; response regulator receiver; ABC transporter related; SMART: ATPase; KEGG: ATP-binding transmembrane ABC transporter protein; response regulator receiver protein complement(1525416..1528181) Burkholderia cenocepacia AU 1054 4091788 YP_621268.1 CDS Bcen_1389 NC_008060.1 1528266 1529129 R PFAM: transport-associated; KEGG: bps:BPSS2260 hypothetical protein; transport-associated complement(1528266..1529129) Burkholderia cenocepacia AU 1054 4091789 YP_621269.1 CDS Bcen_1390 NC_008060.1 1529314 1529799 R KEGG: bps:BPSL1133 hypothetical protein; hypothetical protein complement(1529314..1529799) Burkholderia cenocepacia AU 1054 4091790 YP_621270.1 CDS Bcen_1391 NC_008060.1 1529950 1531530 D PFAM: response regulator receiver; ATP-binding region, ATPase-like; histidine kinase A-like; PAS fold-3; PAS fold-4; PAS fold; SMART: PAS; KEGG: reu:Reut_B4112 PAS; multi-sensor hybrid histidine kinase 1529950..1531530 Burkholderia cenocepacia AU 1054 4091791 YP_621271.1 CDS Bcen_1392 NC_008060.1 1531900 1533105 R PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: alcohol dehydrogenase; alcohol dehydrogenase GroES-like protein complement(1531900..1533105) Burkholderia cenocepacia AU 1054 4091792 YP_621272.1 CDS Bcen_1393 NC_008060.1 1533246 1533716 R KEGG: bur:Bcep18194_C7012 hypothetical protein; hypothetical protein complement(1533246..1533716) Burkholderia cenocepacia AU 1054 4091793 YP_621273.1 CDS Bcen_1394 NC_008060.1 1533746 1534456 R PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: bur:Bcep18194_C7011 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-like proteins complement(1533746..1534456) Burkholderia cenocepacia AU 1054 4091794 YP_621274.1 CDS Bcen_1395 NC_008060.1 1534507 1534725 D KEGG: bur:Bcep18194_C7010 hypothetical protein; hypothetical protein 1534507..1534725 Burkholderia cenocepacia AU 1054 4091795 YP_621275.1 CDS Bcen_1396 NC_008060.1 1534775 1535152 R KEGG: bur:Bcep18194_C7009 hypothetical protein; hypothetical protein complement(1534775..1535152) Burkholderia cenocepacia AU 1054 4091796 YP_621276.1 CDS Bcen_1397 NC_008060.1 1535195 1536724 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_C7008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1535195..1536724) Burkholderia cenocepacia AU 1054 4091797 YP_621277.1 CDS Bcen_1398 NC_008060.1 1536957 1538117 D Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate; formate dehydrogenase 1536957..1538117 Burkholderia cenocepacia AU 1054 4091798 YP_621278.1 CDS Bcen_1399 NC_008060.1 1538143 1539567 R PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: bur:Bcep18194_C7006 transcriptional regulator GntR family with aminotransferase domain; GntR family transcriptional regulator complement(1538143..1539567) Burkholderia cenocepacia AU 1054 4091799 YP_621279.1 CDS Bcen_1400 NC_008060.1 1539947 1540195 R KEGG: bur:Bcep18194_C7005 hypothetical protein; hypothetical protein complement(1539947..1540195) Burkholderia cenocepacia AU 1054 4091800 YP_621280.1 CDS Bcen_1401 NC_008060.1 1540230 1540685 R KEGG: bur:Bcep18194_C7004 membrane protein; membrane protein complement(1540230..1540685) Burkholderia cenocepacia AU 1054 4091801 YP_621281.1 CDS Bcen_1402 NC_008060.1 1540773 1541708 R PFAM: phosphate-starvation-inducible E; KEGG: bur:Bcep18194_C7003 phosphate-starvation-inducible protein E; phosphate-starvation-inducible E complement(1540773..1541708) Burkholderia cenocepacia AU 1054 4091802 YP_621282.1 CDS Bcen_1403 NC_008060.1 1542022 1543101 D PFAM: Dyp-type peroxidase; KEGG: bur:Bcep18194_C7001 Dyp-type peroxidase; Dyp-type peroxidase 1542022..1543101 Burkholderia cenocepacia AU 1054 4091803 YP_621283.1 CDS Bcen_1404 NC_008060.1 1543094 1543909 D PFAM: Linocin_M18 bacteriocin protein; KEGG: bur:Bcep18194_C7000 Linocin_M18 bacteriocin protein; Linocin_M18 bacteriocin protein 1543094..1543909 Burkholderia cenocepacia AU 1054 4091804 YP_621284.1 CDS Bcen_1405 NC_008060.1 1544014 1544283 D KEGG: bur:Bcep18194_C6999 hypothetical protein; hypothetical protein 1544014..1544283 Burkholderia cenocepacia AU 1054 4091805 YP_621285.1 CDS Bcen_1406 NC_008060.1 1544920 1547760 D PFAM: ATPase AAA; Clp, N terminal; ATPase associated with various cellular activities, AAA_5; ATPase AAA; SMART: ATPase; KEGG: bur:Bcep18194_C6998 ClpA/B protease, ATPase subunit; ATPase AAA 1544920..1547760 Burkholderia cenocepacia AU 1054 4091806 YP_621286.1 CDS Bcen_1407 NC_008060.1 1547885 1550164 D TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bur:Bcep18194_C6997 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit 1547885..1550164 Burkholderia cenocepacia AU 1054 4091807 YP_621287.1 CDS Bcen_1408 NC_008060.1 1550387 1550890 R KEGG: efa:EF0905 pentapeptide repeat family protein; hypothetical protein complement(1550387..1550890) Burkholderia cenocepacia AU 1054 4091808 YP_621288.1 CDS Bcen_1409 NC_008060.1 1551205 1552767 R PFAM: Sel1-like repeat; KEGG: bur:Bcep18194_B2997 hypothetical protein; Sel1 repeat-containing protein complement(1551205..1552767) Burkholderia cenocepacia AU 1054 4091809 YP_621289.1 CDS Bcen_1410 NC_008060.1 1552877 1554958 R PFAM: phospholipase D/Transphosphatidylase; KEGG: bur:Bcep18194_B2998 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase complement(1552877..1554958) Burkholderia cenocepacia AU 1054 4091810 YP_621290.1 CDS Bcen_1411 NC_008060.1 1554994 1557864 R PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_A5512 rhs element Vgr protein; Rhs element Vgr protein complement(1554994..1557864) Burkholderia cenocepacia AU 1054 4091811 YP_621291.1 CDS Bcen_1412 NC_008060.1 1558213 1558533 D KEGG: bur:Bcep18194_C6976 hypothetical protein; hypothetical protein 1558213..1558533 Burkholderia cenocepacia AU 1054 4091812 YP_621292.1 CDS Bcen_1413 NC_008060.1 1558743 1559756 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase II 1558743..1559756 Burkholderia cenocepacia AU 1054 4091813 YP_621293.1 CDS Bcen_1414 NC_008060.1 1560085 1560822 D KEGG: pfo:Pfl_3563 hypothetical protein; hypothetical protein 1560085..1560822 Burkholderia cenocepacia AU 1054 4091814 YP_621294.1 CDS Bcen_1415 NC_008060.1 1560904 1562250 R KEGG: pfl:PFL_4164 hypothetical protein; hypothetical protein complement(1560904..1562250) Burkholderia cenocepacia AU 1054 4093469 YP_621295.1 CDS Bcen_1416 NC_008060.1 1562247 1568552 R PFAM: protein kinase; SMART: Serine/threonine protein kinase; KEGG: pfl:PFL_4163 protein kinase; serine/threonine protein kinase complement(1562247..1568552) Burkholderia cenocepacia AU 1054 4093470 YP_621296.1 CDS Bcen_1417 NC_008060.1 1568570 1569103 R KEGG: pfl:PFL_4162 organic radical activating enzyme family protein; organic radical activating enzyme family protein complement(1568570..1569103) Burkholderia cenocepacia AU 1054 4093471 YP_621297.1 CDS Bcen_1418 NC_008060.1 1569218 1571041 R PFAM: ATPase associated with various cellular activities, AAA_5; ATPase AAA; SMART: ATPase; KEGG: pae:PA2725 probable chaperone; ATPase AAA complement(1569218..1571041) Burkholderia cenocepacia AU 1054 4093472 YP_621298.1 CDS Bcen_1419 NC_008060.1 1571181 1571726 R KEGG: bur:Bcep18194_C6974 glyoxalase/bleomycin resistance protein/dioxygenase; hypothetical protein complement(1571181..1571726) Burkholderia cenocepacia AU 1054 4093473 YP_621299.1 CDS Bcen_1420 NC_008060.1 1571820 1572740 R PFAM: protein of unknown function UPF0187; KEGG: bur:Bcep18194_C6970 protein of unknown function UPF0187; hypothetical protein complement(1571820..1572740) Burkholderia cenocepacia AU 1054 4093474 YP_621300.1 CDS Bcen_1421 NC_008060.1 1572906 1573913 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: bur:Bcep18194_C6969 cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase, subunit II complement(1572906..1573913) Burkholderia cenocepacia AU 1054 4093475 YP_621301.1 CDS Bcen_1422 NC_008060.1 1573916 1575391 R PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: bur:Bcep18194_C6968 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase, subunit I complement(1573916..1575391) Burkholderia cenocepacia AU 1054 4093476 YP_621302.1 CDS Bcen_1423 NC_008060.1 1575739 1576608 D TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; KEGG: bur:Bcep18194_C6967 formate dehydrogenase, subunit FdhD; formate dehydrogenase family accessory protein FdhD 1575739..1576608 Burkholderia cenocepacia AU 1054 4093477 YP_621303.1 CDS Bcen_1424 NC_008060.1 1576605 1577819 D PFAM: molybdopterin binding domain; MoeA-like, domain I and II; MoeA-like, domain IV; KEGG: bur:Bcep18194_C6966 molybdopterin binding protein, MoeA; MoeA-like domain-containing protein 1576605..1577819 Burkholderia cenocepacia AU 1054 4093478 YP_621304.1 CDS Bcen_1425 NC_008060.1 1578049 1579173 D KEGG: bur:Bcep18194_C6965 molybdenum cofactor synthesis protein TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM; molybdenum cofactor synthesis-like; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 1578049..1579173 Burkholderia cenocepacia AU 1054 4093479 YP_621305.1 CDS Bcen_1426 NC_008060.1 1579221 1579793 D PFAM: molybdopterin biosynthesis MoaE; KEGG: bur:Bcep18194_C6964 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE 1579221..1579793 Burkholderia cenocepacia AU 1054 4093480 YP_621306.1 CDS Bcen_1427 NC_008060.1 1579846 1580103 D PFAM: hypothetical protein; KEGG: bur:Bcep18194_C6963 thiamine S; hypothetical protein 1579846..1580103 Burkholderia cenocepacia AU 1054 4093481 YP_621307.1 CDS Bcen_1428 NC_008060.1 1580141 1582063 R PFAM: AMP-dependent synthetase and ligase; KEGG: reu:Reut_A1821 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(1580141..1582063) Burkholderia cenocepacia AU 1054 4093482 YP_621308.1 CDS Bcen_1429 NC_008060.1 1582138 1582941 R TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: eba:ebA1954 2-ketocyclohexanecarboxyl-CoA hydrolase; naphthoate synthase complement(1582138..1582941) Burkholderia cenocepacia AU 1054 4093483 YP_621309.1 CDS Bcen_1430 NC_008060.1 1582938 1584284 R PFAM: aminotransferase class-III; KEGG: sma:SAV4551 aminotransferase; hypothetical protein complement(1582938..1584284) Burkholderia cenocepacia AU 1054 4093484 YP_621310.1 CDS Bcen_1431 NC_008060.1 1584410 1585330 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sec:SC2922 regulator of gcv operon (LysR family); LysR family transcriptional regulator 1584410..1585330 Burkholderia cenocepacia AU 1054 4093485 YP_621311.1 CDS Bcen_1432 NC_008060.1 1585388 1586812 R PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: bur:Bcep18194_C6954 transcriptional regulator, GntR family, contains an aminotransferase domain; GntR family transcriptional regulator complement(1585388..1586812) Burkholderia cenocepacia AU 1054 4093486 YP_621312.1 CDS Bcen_1433 NC_008060.1 1587958 1589370 R PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: sme:SMc01406 transcription regulator protein; GntR family transcriptional regulator complement(1587958..1589370) Burkholderia cenocepacia AU 1054 4093487 YP_621313.1 CDS Bcen_1434 NC_008060.1 1589602 1590831 D PFAM: FAD dependent oxidoreductase; KEGG: sil:SPO0543 hypothetical protein; D-amino-acid dehydrogenase 1589602..1590831 Burkholderia cenocepacia AU 1054 4093488 YP_621314.1 CDS Bcen_1435 NC_008060.1 1590867 1592018 D PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B1950 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor 1590867..1592018 Burkholderia cenocepacia AU 1054 4093489 YP_621315.1 CDS Bcen_1436 NC_008060.1 1592050 1592964 R KEGG: bur:Bcep18194_C6952 hypothetical protein; hypothetical protein complement(1592050..1592964) Burkholderia cenocepacia AU 1054 4093490 YP_621316.1 CDS Bcen_1437 NC_008060.1 1593054 1593377 R PFAM: TfoX-like; KEGG: bur:Bcep18194_C6951 TfoX-like protein; TfoX-like protein complement(1593054..1593377) Burkholderia cenocepacia AU 1054 4093491 YP_621317.1 CDS Bcen_1438 NC_008060.1 1593434 1595170 R PFAM: phage integrase; KEGG: bur:Bcep18194_C6948 phage integrase; phage integrase complement(1593434..1595170) Burkholderia cenocepacia AU 1054 4093492 YP_621318.1 CDS Bcen_1439 NC_008060.1 1595357 1595548 R KEGG: bur:Bcep18194_C6945 hypothetical protein; hypothetical protein complement(1595357..1595548) Burkholderia cenocepacia AU 1054 4093493 YP_621319.1 CDS Bcen_1440 NC_008060.1 1595562 1596041 R PFAM: UspA; KEGG: bur:Bcep18194_C6944 universal stress protein, UspA family; hypothetical protein complement(1595562..1596041) Burkholderia cenocepacia AU 1054 4093494 YP_621320.1 CDS Bcen_1441 NC_008060.1 1596347 1597108 D KEGG: bur:Bcep18194_C6932 2-keto-4-pentenoate hydratase-like; 2-keto-4-pentenoate hydratase 1596347..1597108 Burkholderia cenocepacia AU 1054 4093495 YP_621321.1 CDS Bcen_1442 NC_008060.1 1597140 1598552 D KEGG: bur:Bcep18194_C6929 hypothetical protein; hypothetical protein 1597140..1598552 Burkholderia cenocepacia AU 1054 4093496 YP_621322.1 CDS Bcen_1443 NC_008060.1 1598597 1599649 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_C6928 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1598597..1599649) Burkholderia cenocepacia AU 1054 4093497 YP_621323.1 CDS Bcen_1444 NC_008060.1 1599798 1600124 R KEGG: bur:Bcep18194_C6927 hypothetical protein; hypothetical protein complement(1599798..1600124) Burkholderia cenocepacia AU 1054 4093498 YP_621324.1 CDS Bcen_1445 NC_008060.1 1600158 1601681 R KEGG: bur:Bcep18194_C6926 hypothetical protein; hypothetical protein complement(1600158..1601681) Burkholderia cenocepacia AU 1054 4093499 YP_621325.1 CDS Bcen_1446 NC_008060.1 1602131 1604299 D KEGG: bur:Bcep18194_C6925 hypothetical protein; hypothetical protein 1602131..1604299 Burkholderia cenocepacia AU 1054 4093500 YP_621326.1 CDS Bcen_1447 NC_008060.1 1604399 1605013 D KEGG: bur:Bcep18194_C6924 hypothetical protein; hypothetical protein 1604399..1605013 Burkholderia cenocepacia AU 1054 4093501 YP_621327.1 CDS Bcen_1448 NC_008060.1 1605051 1605701 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_C6922 lysine exporter family(LysE/YggA); lysine exporter protein LysE/YggA complement(1605051..1605701) Burkholderia cenocepacia AU 1054 4093502 YP_621328.1 CDS Bcen_1449 NC_008060.1 1605868 1606788 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C6921 transcriptional regulator, LysR family; LysR family transcriptional regulator 1605868..1606788 Burkholderia cenocepacia AU 1054 4093503 YP_621329.1 CDS Bcen_1450 NC_008060.1 1606885 1607721 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6920 alpha/beta hydrolase; alpha/beta hydrolase complement(1606885..1607721) Burkholderia cenocepacia AU 1054 4093504 YP_621330.1 CDS Bcen_1451 NC_008060.1 1607865 1608698 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C6919 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(1607865..1608698) Burkholderia cenocepacia AU 1054 4093505 YP_621331.1 CDS Bcen_1452 NC_008060.1 1608793 1609764 D PFAM: helix-turn-helix, AraC type; AraC-type transcriptional regulator; KEGG: bur:Bcep18194_C6918 transcriptional regulator, AraC family; AraC family transcriptional regulator 1608793..1609764 Burkholderia cenocepacia AU 1054 4093506 YP_621332.1 CDS Bcen_1453 NC_008060.1 1609985 1611190 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C6915 major facilitator superfamily, (MFS_1) family; major facilitator transporter complement(1609985..1611190) Burkholderia cenocepacia AU 1054 4093507 YP_621333.1 CDS Bcen_1454 NC_008060.1 1611187 1611552 R PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_C6914 endoribonuclease L-PSP; endoribonuclease L-PSP complement(1611187..1611552) Burkholderia cenocepacia AU 1054 4091970 YP_621334.1 CDS Bcen_1455 NC_008060.1 1611687 1612505 D PFAM: transcriptional regulator TrmB; KEGG: bur:Bcep18194_C6913 transcriptional regulator TrmB; TrmB family transcriptional regulator 1611687..1612505 Burkholderia cenocepacia AU 1054 4091971 YP_621335.1 CDS Bcen_1456 NC_008060.1 1612522 1613382 D PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bur:Bcep18194_C6912 phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis PhzC/PhzF protein 1612522..1613382 Burkholderia cenocepacia AU 1054 4091972 YP_621336.1 CDS Bcen_1457 NC_008060.1 1613410 1614573 R PFAM: Aldose 1-epimerase; KEGG: zmo:ZMO0889 aldose 1-epimerase precursor; aldose 1-epimerase complement(1613410..1614573) Burkholderia cenocepacia AU 1054 4091973 YP_621337.1 CDS Bcen_1458 NC_008060.1 1614675 1615580 R PFAM: helix-turn-helix, AraC type; KEGG: mlo:mll0489 probable transcriptional regulator; AraC family transcriptional regulator complement(1614675..1615580) Burkholderia cenocepacia AU 1054 4091974 YP_621338.1 CDS Bcen_1459 NC_008060.1 1615703 1616611 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4973 transcriptional regulator, LysR family; LysR family transcriptional regulator 1615703..1616611 Burkholderia cenocepacia AU 1054 4091975 YP_621339.1 CDS Bcen_1460 NC_008060.1 1616660 1618141 R PFAM: cyclic nucleotide-binding; MscS Mechanosensitive ion channel; KEGG: pfo:Pfl_1968 cyclic nucleotide-regulated small mechanosensitive ion channel; MscS mechanosensitive ion channel complement(1616660..1618141) Burkholderia cenocepacia AU 1054 4091976 YP_621340.1 CDS Bcen_1461 NC_008060.1 1618253 1618672 R PFAM: DoxX; KEGG: pfo:Pfl_1964 DoxX; DoxX protein complement(1618253..1618672) Burkholderia cenocepacia AU 1054 4091977 YP_621341.1 CDS Bcen_1462 NC_008060.1 1618902 1620707 R PFAM: transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A4972 transcriptional regulator, winged helix family; transcriptional regulator complement(1618902..1620707) Burkholderia cenocepacia AU 1054 4091978 YP_621342.1 CDS Bcen_1463 NC_008060.1 1621154 1621975 R PFAM: alpha/beta hydrolase fold; KEGG: ppu:PP5253 arylesterase; alpha/beta hydrolase complement(1621154..1621975) Burkholderia cenocepacia AU 1054 4091979 YP_621343.1 CDS Bcen_1464 NC_008060.1 1622040 1622471 R KEGG: bur:Bcep18194_A4970 hypothetical protein; hypothetical protein complement(1622040..1622471) Burkholderia cenocepacia AU 1054 4091980 YP_621344.1 CDS Bcen_1465 NC_008060.1 1622839 1623819 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A4969 alpha/beta hydrolase; chloride peroxidase 1622839..1623819 Burkholderia cenocepacia AU 1054 4091981 YP_621345.1 CDS Bcen_1466 NC_008060.1 1623911 1625491 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4968 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1623911..1625491) Burkholderia cenocepacia AU 1054 4091982 YP_621346.1 CDS Bcen_1467 NC_008060.1 1625575 1626603 D PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_A4967 secretion protein HlyD family; secretion protein HlyD 1625575..1626603 Burkholderia cenocepacia AU 1054 4091983 YP_621347.1 CDS Bcen_1468 NC_008060.1 1626600 1628036 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A4966 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT 1626600..1628036 Burkholderia cenocepacia AU 1054 4091984 YP_621348.1 CDS Bcen_1469 NC_008060.1 1628062 1629732 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A4965 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1628062..1629732) Burkholderia cenocepacia AU 1054 4091985 YP_621349.1 CDS Bcen_1470 NC_008060.1 1630172 1631458 D PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_A4958 cytochrome c, class I; cytochrome c, class I 1630172..1631458 Burkholderia cenocepacia AU 1054 4091986 YP_621350.1 CDS Bcen_1471 NC_008060.1 1631455 1631955 D PFAM: ferredoxin; [2Fe-2S]-binding; KEGG: bur:Bcep18194_A4957 ferredoxin/(2Fe-2S)-binding protein; (2Fe-2S)-binding protein 1631455..1631955 Burkholderia cenocepacia AU 1054 4091987 YP_621351.1 CDS Bcen_1472 NC_008060.1 1631955 1634216 D PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bur:Bcep18194_A4956 aldehyde dehydrogenase; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 1631955..1634216 Burkholderia cenocepacia AU 1054 4091988 YP_621352.1 CDS Bcen_1473 NC_008060.1 1634320 1635237 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4955 transcriptional regulator, LysR family; LysR family transcriptional regulator 1634320..1635237 Burkholderia cenocepacia AU 1054 4091989 YP_621353.1 CDS Bcen_1474 NC_008060.1 1635419 1636636 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4954 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1635419..1636636 Burkholderia cenocepacia AU 1054 4091990 YP_621354.1 CDS Bcen_1475 NC_008060.1 1636715 1637827 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_A4953 NADH-flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1636715..1637827 Burkholderia cenocepacia AU 1054 4091991 YP_621355.1 CDS Bcen_1476 NC_008060.1 1637901 1638575 R KEGG: bur:Bcep18194_A4971 metal-dependent phosphohydrolase; metal-dependent phosphohydrolase complement(1637901..1638575) Burkholderia cenocepacia AU 1054 4091992 YP_621356.1 CDS Bcen_1477 NC_008060.1 1638669 1640654 R PFAM: Amidohydrolase 3; KEGG: gsu:GSU1344 hypothetical protein; amidohydrolase 3 complement(1638669..1640654) Burkholderia cenocepacia AU 1054 4091993 YP_621357.1 CDS Bcen_1478 NC_008060.1 1640703 1642121 R PFAM: Tetratricopeptide TPR_4; KEGG: bja:bll0295 transcriptional regulator; hypothetical protein complement(1640703..1642121) Burkholderia cenocepacia AU 1054 4091994 YP_621358.1 CDS Bcen_1479 NC_008060.1 1642114 1643622 R PFAM: transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A4972 transcriptional regulator, winged helix family; transcriptional regulator complement(1642114..1643622) Burkholderia cenocepacia AU 1054 4091995 YP_621359.1 CDS Bcen_1480 NC_008060.1 1644021 1644941 D PFAM: helix-turn-helix, AraC type; KEGG: bps:BPSS0436 AraC-family regulatory protein; AraC family transcriptional regulator 1644021..1644941 Burkholderia cenocepacia AU 1054 4091996 YP_621360.1 CDS Bcen_1481 NC_008060.1 1644966 1646012 R PFAM: beta-lactamase-like; KEGG: bja:blr6966 hypothetical protein; beta-lactamase-like complement(1644966..1646012) Burkholderia cenocepacia AU 1054 4091997 YP_621361.1 CDS Bcen_1482 NC_008060.1 1646229 1647134 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: reu:Reut_B5648 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 1646229..1647134 Burkholderia cenocepacia AU 1054 4091998 YP_621362.1 CDS Bcen_1483 NC_008060.1 1647163 1648629 R KEGG: hypothetical protein; hypothetical protein complement(1647163..1648629) Burkholderia cenocepacia AU 1054 4091999 YP_621363.1 CDS Bcen_1484 NC_008060.1 1648644 1649597 R KEGG: bur:Bcep18194_A4541 hypothetical protein; hypothetical protein complement(1648644..1649597) Burkholderia cenocepacia AU 1054 4092000 YP_621364.1 CDS Bcen_1485 NC_008060.1 1649770 1651659 R PFAM: Amidohydrolase 3; KEGG: bur:Bcep18194_A4539 metal-dependent hydrolase; amidohydrolase 3 complement(1649770..1651659) Burkholderia cenocepacia AU 1054 4092001 YP_621365.1 CDS Bcen_1486 NC_008060.1 1651679 1651846 R PFAM: protein of unknown function DUF1427; KEGG: bur:Bcep18194_A4538 hypothetical protein; hypothetical protein complement(1651679..1651846) Burkholderia cenocepacia AU 1054 4092002 YP_621366.1 CDS Bcen_1487 NC_008060.1 1652014 1652700 R PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_A4536 isochorismatase hydrolase; isochorismatase hydrolase complement(1652014..1652700) Burkholderia cenocepacia AU 1054 4092003 YP_621367.1 CDS Bcen_1488 NC_008060.1 1653007 1653285 D PFAM: protein of unknown function DUF1427; KEGG: bur:Bcep18194_A4535 hypothetical protein; hypothetical protein 1653007..1653285 Burkholderia cenocepacia AU 1054 4092004 YP_621368.1 CDS Bcen_1489 NC_008060.1 1653444 1654352 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4973 transcriptional regulator, LysR family; LysR family transcriptional regulator 1653444..1654352 Burkholderia cenocepacia AU 1054 4092005 YP_621369.1 CDS Bcen_1490 NC_008060.1 1654508 1655245 R PFAM: protein of unknown function DUF1275; KEGG: bur:Bcep18194_A4542 protein of unknown function DUF1275; hypothetical protein complement(1654508..1655245) Burkholderia cenocepacia AU 1054 4092006 YP_621370.1 CDS Bcen_1491 NC_008060.1 1655227 1655463 R KEGG: bur:Bcep18194_A4952 hypothetical protein; hypothetical protein complement(1655227..1655463) Burkholderia cenocepacia AU 1054 4092007 YP_621371.1 CDS Bcen_1492 NC_008060.1 1655767 1656642 D PFAM: alpha/beta hydrolase fold; KEGG: bja:blr6965 dehalogenase; alpha/beta hydrolase 1655767..1656642 Burkholderia cenocepacia AU 1054 4092008 YP_621372.1 CDS Bcen_1493 NC_008060.1 1656684 1657826 D PFAM: monooxygenase, FAD-binding; KEGG: bur:Bcep18194_A4947 monooxygenase, FAD-binding; hypothetical protein 1656684..1657826 Burkholderia cenocepacia AU 1054 4092009 YP_621373.1 CDS Bcen_1494 NC_008060.1 1658020 1658301 R KEGG: bur:Bcep18194_B1657 hypothetical protein; hypothetical protein complement(1658020..1658301) Burkholderia cenocepacia AU 1054 4092010 YP_621374.1 CDS Bcen_1495 NC_008060.1 1658475 1659224 R PFAM: ABC transporter related; SMART: ATPase; KEGG: pfo:Pfl_5462 ABC transporter; ABC transporter complement(1658475..1659224) Burkholderia cenocepacia AU 1054 4092011 YP_621375.1 CDS Bcen_1496 NC_008060.1 1659211 1659861 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO5247 amino acid ABC transporter, permease protein; amino acid ABC transporter permease complement(1659211..1659861) Burkholderia cenocepacia AU 1054 4092012 YP_621376.1 CDS Bcen_1497 NC_008060.1 1659858 1660544 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_C6714 ABC amino acid transporter, inner membrane subunit; amino acid ABC transporter permease complement(1659858..1660544) Burkholderia cenocepacia AU 1054 4092013 YP_621377.1 CDS Bcen_1498 NC_008060.1 1660634 1661377 R PFAM: extracellular solute-binding protein, family 3; KEGG: atc:AGR_C_2566 antigenic protein; extracellular solute-binding protein complement(1660634..1661377) Burkholderia cenocepacia AU 1054 4092014 YP_621378.1 CDS Bcen_1499 NC_008060.1 1661550 1663403 D PFAM: amino acid permease-associated region; KEGG: yps:YPTB1935 L-asparagine permease, APC family; amino acid permease 1661550..1663403 Burkholderia cenocepacia AU 1054 4092015 YP_621379.1 CDS Bcen_1500 NC_008060.1 1663475 1663780 R KEGG: bma:BMAA0421 hypothetical protein; hypothetical protein complement(1663475..1663780) Burkholderia cenocepacia AU 1054 4092016 YP_621380.1 CDS Bcen_1501 NC_008060.1 1664079 1667327 D PFAM: acriflavin resistance protein; KEGG: reu:Reut_A1816 acriflavin resistance protein; acriflavin resistance protein 1664079..1667327 Burkholderia cenocepacia AU 1054 4092017 YP_621381.1 CDS Bcen_1502 NC_008060.1 1667380 1668816 D PFAM: secretion protein HlyD; KEGG: reu:Reut_A1817 secretion protein HlyD; secretion protein HlyD 1667380..1668816 Burkholderia cenocepacia AU 1054 4092018 YP_621382.1 CDS Bcen_1503 NC_008060.1 1668848 1670392 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: reu:Reut_A1818 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system, outer membrane lipoprotein, NodT 1668848..1670392 Burkholderia cenocepacia AU 1054 4092019 YP_621383.1 CDS Bcen_1504 NC_008060.1 1670370 1671830 R TIGRFAM: Heavy metal sensor kinase; PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; KEGG: rso:RSp0488 probable transmembrane sensory transduction histidine kinase for cobalt zinc cadmium resistance transcription regulator protein; heavy metal sensor signal transduction histidine kinase complement(1670370..1671830) Burkholderia cenocepacia AU 1054 4092020 YP_621384.1 CDS Bcen_1505 NC_008060.1 1671827 1672504 R TIGRFAM: Heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: reu:Reut_A1815 heavy metal response regulator; two component heavy metal response transcriptional regulator complement(1671827..1672504) Burkholderia cenocepacia AU 1054 4092021 YP_621385.1 CDS Bcen_1506 NC_008060.1 1672789 1673826 R PFAM: helix-turn-helix, AraC type; ThiJ/PfpI; KEGG: bja:blr4954 transcriptional regulatory protein; AraC family transcriptional regulator complement(1672789..1673826) Burkholderia cenocepacia AU 1054 4092022 YP_621386.1 CDS Bcen_1507 NC_008060.1 1674172 1675818 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mlo:mlr6656 dehydrogenase; glucose-methanol-choline oxidoreductase 1674172..1675818 Burkholderia cenocepacia AU 1054 4092023 YP_621387.1 CDS Bcen_1508 NC_008060.1 1675869 1676756 D PFAM: Xylose isomerase-like TIM barrel; KEGG: mlo:mll6643 hypothetical protein; xylose isomerase 1675869..1676756 Burkholderia cenocepacia AU 1054 4092024 YP_621388.1 CDS Bcen_1509 NC_008060.1 1677004 1677834 D KEGG: xcv:XCV3883 secreted protein; hypothetical protein 1677004..1677834 Burkholderia cenocepacia AU 1054 4092025 YP_621389.1 CDS Bcen_1510 NC_008060.1 1677831 1678529 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rso:RSp1258 [acyl-carrier-protein] phosphodiesterase; ACP phosphodiesterase 1677831..1678529 Burkholderia cenocepacia AU 1054 4092026 YP_621390.1 CDS Bcen_1511 NC_008060.1 1678541 1678849 D KEGG: xac:XAC3774 hypothetical protein; hypothetical protein 1678541..1678849 Burkholderia cenocepacia AU 1054 4092027 YP_621391.1 CDS Bcen_1512 NC_008060.1 1678920 1680077 R PFAM: major facilitator superfamily MFS_1; KEGG: transport protein; major facilitator transporter complement(1678920..1680077) Burkholderia cenocepacia AU 1054 4092028 YP_621392.1 CDS Bcen_1513 NC_008060.1 1680190 1681056 R PFAM: glycoside hydrolase, family 3-like; KEGG: tel:tll1043 probable hydrolase; glycoside hydrolase family protein complement(1680190..1681056) Burkholderia cenocepacia AU 1054 4092029 YP_621393.1 CDS Bcen_1514 NC_008060.1 1681112 1682251 R PFAM: glycoside hydrolase, family 3-like; KEGG: sma:SAV3019 sugar hydrolase; glycoside hydrolase family protein complement(1681112..1682251) Burkholderia cenocepacia AU 1054 4092030 YP_621394.1 CDS Bcen_1515 NC_008060.1 1682686 1683963 D PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_A4071 ABC sugar transporter, periplasmic ligand binding protein; extracellular solute-binding protein 1682686..1683963 Burkholderia cenocepacia AU 1054 4092031 YP_621395.1 CDS Bcen_1516 NC_008060.1 1684031 1685161 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_A4500 outer membrane protein, (porin); porin complement(1684031..1685161) Burkholderia cenocepacia AU 1054 4092032 YP_621396.1 CDS Bcen_1517 NC_008060.1 1685603 1686889 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(1685603..1686889) Burkholderia cenocepacia AU 1054 4092033 YP_621397.1 CDS Bcen_1518 NC_008060.1 1687239 1687901 D KEGG: sme:SMc02468 hypothetical protein; hypothetical protein 1687239..1687901 Burkholderia cenocepacia AU 1054 4092034 YP_621398.1 CDS Bcen_1519 NC_008060.1 1687977 1689764 D PFAM: thiamine pyrophosphate enzyme-like TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme-like TPP binding region; KEGG: mlo:mlr6648 acetolactate synthase large subunit; thiamine pyrophosphate enzyme-like protein 1687977..1689764 Burkholderia cenocepacia AU 1054 4092035 YP_621399.1 CDS Bcen_1520 NC_008060.1 1689777 1691381 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: atc:AGR_L_1138 dehydrogenase subunit I; glucose-methanol-choline oxidoreductase 1689777..1691381 Burkholderia cenocepacia AU 1054 4092036 YP_621400.1 CDS Bcen_1521 NC_008060.1 1691421 1692587 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cjk:jk0329 transcriptional regulators; LacI family transcriptional regulator complement(1691421..1692587) Burkholderia cenocepacia AU 1054 4092037 YP_621401.1 CDS Bcen_1522 NC_008060.1 1692584 1693420 R PFAM: inositol monophosphatase; KEGG: rsp:RSP_1450 inositol monophosphatase family protein; inositol monophosphatase complement(1692584..1693420) Burkholderia cenocepacia AU 1054 4092038 YP_621402.1 CDS Bcen_1524 NC_008060.1 1694568 1695485 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A0094 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1694568..1695485) Burkholderia cenocepacia AU 1054 4092040 YP_621403.1 CDS Bcen_1525 NC_008060.1 1695463 1696422 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_4369 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1695463..1696422) Burkholderia cenocepacia AU 1054 4092041 YP_621404.1 CDS Bcen_1526 NC_008060.1 1696674 1697642 D KEGG: mlo:mlr6646 hypothetical protein; hypothetical protein 1696674..1697642 Burkholderia cenocepacia AU 1054 4092042 YP_621405.1 CDS Bcen_1527 NC_008060.1 1697877 1698980 R PFAM: transposase, IS4; KEGG: gsu:GSU2597 ISGsu2, transposase; transposase, IS4 complement(1697877..1698980) Burkholderia cenocepacia AU 1054 4092043 YP_621406.1 CDS Bcen_1528 NC_008060.1 1699359 1700522 R PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_4038 transporter; major facilitator transporter complement(1699359..1700522) Burkholderia cenocepacia AU 1054 4092044 YP_621407.1 CDS Bcen_1529 NC_008060.1 1700664 1702085 R PFAM: amino acid permease-associated region; KEGG: pfo:Pfl_2055 amino acid permease-associated region; amino acid permease-associated region complement(1700664..1702085) Burkholderia cenocepacia AU 1054 4092045 YP_621408.1 CDS Bcen_1530 NC_008060.1 1702474 1703178 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: eca:ECA3767 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1702474..1703178) Burkholderia cenocepacia AU 1054 4092046 YP_621409.1 CDS Bcen_1531 NC_008060.1 1703190 1703996 R PFAM: regulatory protein, DeoR; KEGG: psp:PSPPH_3439 transcriptional regulator, DeoR family; DeoR family transcriptional regulator complement(1703190..1703996) Burkholderia cenocepacia AU 1054 4092047 YP_621410.1 CDS Bcen_1532 NC_008060.1 1704101 1705288 R PFAM: glycosyl hydrolase, BNR repeat; KEGG: eca:ECA3765 hypothetical protein; glycosyl hydrolase complement(1704101..1705288) Burkholderia cenocepacia AU 1054 4092644 YP_621411.1 CDS Bcen_1533 NC_008060.1 1705312 1706730 R PFAM: Na+/solute symporter; KEGG: psp:PSPPH_3436 probable sodium/solute symporter; Na+/solute symporter complement(1705312..1706730) Burkholderia cenocepacia AU 1054 4092645 YP_621412.1 CDS pdxA NC_008060.1 1706842 1707867 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(1706842..1707867) Burkholderia cenocepacia AU 1054 4092646 YP_621413.1 CDS Bcen_1535 NC_008060.1 1707879 1709156 R PFAM: type III effector Hrp-dependent outers; KEGG: chy:CHY_1258 hypothetical protein; Hrp-dependent type III effector protein complement(1707879..1709156) Burkholderia cenocepacia AU 1054 4092647 YP_621414.1 CDS Bcen_1536 NC_008060.1 1709153 1710319 R PFAM: iron-containing alcohol dehydrogenase; KEGG: bld:BLi03701 hypothetical protein; iron-containing alcohol dehydrogenase complement(1709153..1710319) Burkholderia cenocepacia AU 1054 4092648 YP_621415.1 CDS Bcen_1537 NC_008060.1 1710333 1711229 R KEGG: bld:BLi03702 dihydrodipicolinate synthase TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase complement(1710333..1711229) Burkholderia cenocepacia AU 1054 4092649 YP_621416.1 CDS Bcen_1538 NC_008060.1 1711437 1711733 R hypothetical protein complement(1711437..1711733) Burkholderia cenocepacia AU 1054 4092650 YP_621417.1 CDS Bcen_1539 NC_008060.1 1711800 1712762 D TIGRFAM: Ribokinase; PFAM: PfkB; KEGG: bur:Bcep18194_C6906 ribokinase; ribokinase 1711800..1712762 Burkholderia cenocepacia AU 1054 4092651 YP_621418.1 CDS Bcen_1540 NC_008060.1 1712803 1714176 D TIGRFAM: L-fucose permease; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C6905 L-fucose permease; L-fucose permease 1712803..1714176 Burkholderia cenocepacia AU 1054 4092652 YP_621419.1 CDS Bcen_1541 NC_008060.1 1714179 1715231 D KEGG: bur:Bcep18194_C6904 hypothetical protein; hypothetical protein 1714179..1715231 Burkholderia cenocepacia AU 1054 4092653 YP_621420.1 CDS Bcen_1542 NC_008060.1 1715290 1716060 R PFAM: regulatory protein, DeoR; KEGG: bur:Bcep18194_C6903 transcriptional regulator, DeoR family; DeoR family transcriptional regulator complement(1715290..1716060) Burkholderia cenocepacia AU 1054 4092654 YP_621421.1 CDS Bcen_1543 NC_008060.1 1716207 1716887 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 1716207..1716887 Burkholderia cenocepacia AU 1054 4092655 YP_621422.1 CDS Bcen_1544 NC_008060.1 1717128 1718039 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: sil:SPO3021 phytanoyl-CoA dioxygenase family protein; phytanoyl-CoA dioxygenase 1717128..1718039 Burkholderia cenocepacia AU 1054 4092656 YP_621423.1 CDS Bcen_1545 NC_008060.1 1718149 1719015 D KEGG: bur:Bcep18194_C6887 hypothetical protein; hypothetical protein 1718149..1719015 Burkholderia cenocepacia AU 1054 4092657 YP_621424.1 CDS Bcen_1546 NC_008060.1 1719024 1719995 R PFAM: protein of unknown function DUF815; KEGG: bur:Bcep18194_C6886 protein of unknown function DUF815; hypothetical protein complement(1719024..1719995) Burkholderia cenocepacia AU 1054 4092658 YP_621425.1 CDS Bcen_1547 NC_008060.1 1719992 1720900 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_C6885 protein of unknown function DUF6, transmembrane; hypothetical protein complement(1719992..1720900) Burkholderia cenocepacia AU 1054 4092659 YP_621426.1 CDS Bcen_1548 NC_008060.1 1720991 1721791 D PFAM: helix-turn-helix, AraC type; Cupin 2, conserved barrel; KEGG: bur:Bcep18194_C6884 transcriptional regulator, AraC family; AraC family transcriptional regulator 1720991..1721791 Burkholderia cenocepacia AU 1054 4092660 YP_621427.1 CDS Bcen_1549 NC_008060.1 1721812 1722297 R KEGG: bur:Bcep18194_C6883 integral membrane protein; integral membrane protein complement(1721812..1722297) Burkholderia cenocepacia AU 1054 4092661 YP_621428.1 CDS Bcen_1550 NC_008060.1 1722300 1723124 R PFAM: NmrA-like; KEGG: bur:Bcep18194_C6882 NmrA-like; NmrA-like complement(1722300..1723124) Burkholderia cenocepacia AU 1054 4092662 YP_621429.1 CDS Bcen_1551 NC_008060.1 1723194 1723859 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_C6881 transcriptional regulator, TetR family; TetR family transcriptional regulator 1723194..1723859 Burkholderia cenocepacia AU 1054 4092663 YP_621430.1 CDS Bcen_1552 NC_008060.1 1723917 1724771 R PFAM: 3-hydroxyacyl-CoA dehydrogenase-like; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_C6875 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase complement(1723917..1724771) Burkholderia cenocepacia AU 1054 4092664 YP_621431.1 CDS Bcen_1553 NC_008060.1 1724810 1726003 R catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase complement(1724810..1726003) Burkholderia cenocepacia AU 1054 4092665 YP_621432.1 CDS Bcen_1554 NC_008060.1 1726051 1727724 R PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: bur:Bcep18194_C6873 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase complement(1726051..1727724) Burkholderia cenocepacia AU 1054 4092666 YP_621433.1 CDS Bcen_1555 NC_008060.1 1727761 1729551 R PFAM: acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_A4177 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase complement(1727761..1729551) Burkholderia cenocepacia AU 1054 4092667 YP_621434.1 CDS Bcen_1556 NC_008060.1 1729955 1731115 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_C6814 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1729955..1731115) Burkholderia cenocepacia AU 1054 4092668 YP_621435.1 CDS Bcen_1557 NC_008060.1 1731115 1732749 R PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C6813 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(1731115..1732749) Burkholderia cenocepacia AU 1054 4092669 YP_621436.1 CDS Bcen_1558 NC_008060.1 1733051 1733842 D TIGRFAM: HAD-superfamily hydrolase subfamily IIB; KEGG: bpa:BPP0856 haloacid dehalogenase-like hydrolase; HAD family hydrolase 1733051..1733842 Burkholderia cenocepacia AU 1054 4092670 YP_621437.1 CDS Bcen_1559 NC_008060.1 1734027 1735136 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_C6811 transcriptional regulator, AraC family; AraC family transcriptional regulator 1734027..1735136 Burkholderia cenocepacia AU 1054 4092671 YP_621438.1 CDS Bcen_1560 NC_008060.1 1735152 1736666 R PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; KEGG: bur:Bcep18194_C6810 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase complement(1735152..1736666) Burkholderia cenocepacia AU 1054 4092672 YP_621439.1 CDS Bcen_1561 NC_008060.1 1736666 1737385 R PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_C6809 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1736666..1737385) Burkholderia cenocepacia AU 1054 4092673 YP_621440.1 CDS Bcen_1562 NC_008060.1 1737556 1738536 R PFAM: EAL; KEGG: rso:RSc0510 probable transmembrane protein; diguanylate phosphodiesterase complement(1737556..1738536) Burkholderia cenocepacia AU 1054 4092674 YP_621441.1 CDS Bcen_1563 NC_008060.1 1738533 1739636 R PFAM: GGDEF; MHYT; KEGG: rso:RSc0510 probable transmembrane protein; integral membrane sensor protein complement(1738533..1739636) Burkholderia cenocepacia AU 1054 4092675 YP_621442.1 CDS Bcen_1564 NC_008060.1 1739871 1740944 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_C7659 outer membrane protein (porin); porin complement(1739871..1740944) Burkholderia cenocepacia AU 1054 4092676 YP_621443.1 CDS Bcen_1565 NC_008060.1 1741131 1742573 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mta:Moth_0632 general substrate transporter; major facilitator transporter complement(1741131..1742573) Burkholderia cenocepacia AU 1054 4092677 YP_621444.1 CDS Bcen_1566 NC_008060.1 1742807 1743730 R PFAM: dihydrodipicolinate synthetase; KEGG: cne:CNJ02600 dihydrodipicolinate synthase DapA; dihydrodipicolinate synthetase complement(1742807..1743730) Burkholderia cenocepacia AU 1054 4092678 YP_621445.1 CDS Bcen_1567 NC_008060.1 1743912 1744856 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: reu:Reut_A1909 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 1743912..1744856 Burkholderia cenocepacia AU 1054 4092679 YP_621446.1 CDS Bcen_1568 NC_008060.1 1744992 1745570 R hypothetical protein complement(1744992..1745570) Burkholderia cenocepacia AU 1054 4092680 YP_621447.1 CDS Bcen_1569 NC_008060.1 1745580 1745876 R KEGG: bur:Bcep18194_B2883 hypothetical protein; hypothetical protein complement(1745580..1745876) Burkholderia cenocepacia AU 1054 4092681 YP_621448.1 CDS Bcen_1570 NC_008060.1 1745940 1746767 R KEGG: bur:Bcep18194_B2884 hypothetical protein; hypothetical protein complement(1745940..1746767) Burkholderia cenocepacia AU 1054 4092682 YP_621449.1 CDS Bcen_1571 NC_008060.1 1746889 1747476 R PFAM: Sel1-like repeat; KEGG: bur:Bcep18194_B2885 hypothetical protein; Sel1 repeat-containing protein complement(1746889..1747476) Burkholderia cenocepacia AU 1054 4092856 YP_621450.1 CDS Bcen_1572 NC_008060.1 1747900 1748502 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_C6808 transcriptional regulator, TetR family; TetR family transcriptional regulator 1747900..1748502 Burkholderia cenocepacia AU 1054 4092857 YP_621451.1 CDS Bcen_1573 NC_008060.1 1748483 1749079 D hypothetical protein 1748483..1749079 Burkholderia cenocepacia AU 1054 4092858 YP_621452.1 CDS Bcen_1574 NC_008060.1 1749162 1750454 D PFAM: natural resistance-associated macrophage protein; KEGG: rpa:RPA0811 manganese transp; natural resistance-associated macrophage protein 1749162..1750454 Burkholderia cenocepacia AU 1054 4092859 YP_621453.1 CDS Bcen_1575 NC_008060.1 1750744 1751229 R hypothetical protein complement(1750744..1751229) Burkholderia cenocepacia AU 1054 4092860 YP_621454.1 CDS Bcen_1576 NC_008060.1 1751556 1751837 D hypothetical protein 1751556..1751837 Burkholderia cenocepacia AU 1054 4092861 YP_621455.1 CDS Bcen_1577 NC_008060.1 1751979 1752203 R KEGG: bur:Bcep18194_C6575 manganese/iron transporter, NRAMP family; manganese/iron transporter complement(1751979..1752203) Burkholderia cenocepacia AU 1054 4092862 YP_621456.1 CDS Bcen_1578 NC_008060.1 1752389 1753303 D PFAM: manganese containing catalase; KEGG: DNA mismatch endonuclease; catalase 1752389..1753303 Burkholderia cenocepacia AU 1054 4092863 YP_621457.1 CDS Bcen_1579 NC_008060.1 1753503 1753808 R KEGG: bps:BPSL2920 hypothetical protein; hypothetical protein complement(1753503..1753808) Burkholderia cenocepacia AU 1054 4092864 YP_621458.1 CDS groEL NC_008060.1 1753907 1755529 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(1753907..1755529) Burkholderia cenocepacia AU 1054 4092865 YP_621459.1 CDS Bcen_1581 NC_008060.1 1755610 1755927 R PFAM: chaperonin Cpn10; KEGG: bpm:BURPS1710b_3429 chaperonin, 10 kDa; chaperonin Cpn10 complement(1755610..1755927) Burkholderia cenocepacia AU 1054 4092866 YP_621460.1 CDS Bcen_1582 NC_008060.1 1756689 1756967 D KEGG: bps:BPSL2916 hypothetical protein; hypothetical protein 1756689..1756967 Burkholderia cenocepacia AU 1054 4092867 YP_621461.1 CDS Bcen_1583 NC_008060.1 1757111 1757509 R PFAM: protein of unknown function DUF336; KEGG: bps:BPSL1747 hypothetical protein; hypothetical protein complement(1757111..1757509) Burkholderia cenocepacia AU 1054 4092868 YP_621462.1 CDS Bcen_1584 NC_008060.1 1757502 1758278 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mac:MA1321 short chain dehydrogenase; short chain dehydrogenase complement(1757502..1758278) Burkholderia cenocepacia AU 1054 4092869 YP_621463.1 CDS Bcen_1585 NC_008060.1 1758347 1759279 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4358 transcriptional regulator, LysR family; LysR family transcriptional regulator 1758347..1759279 Burkholderia cenocepacia AU 1054 4092870 YP_621464.1 CDS Bcen_1586 NC_008060.1 1759487 1760017 D PFAM: Methionine sulfoxide reductase B; KEGG: bur:Bcep18194_C6665 methionine sulfoxide reductase B; protein-methionine-S-oxide reductase 1759487..1760017 Burkholderia cenocepacia AU 1054 4092871 YP_621465.1 CDS Bcen_1587 NC_008060.1 1760053 1761912 D PFAM: cytochrome c biogenesis protein, transmembrane region; Redoxin; KEGG: bur:Bcep18194_C6664 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein, transmembrane region 1760053..1761912 Burkholderia cenocepacia AU 1054 4092872 YP_621466.1 CDS Bcen_1588 NC_008060.1 1761973 1762716 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1761973..1762716 Burkholderia cenocepacia AU 1054 4092873 YP_621467.1 CDS Bcen_1589 NC_008060.1 1762952 1764067 D PFAM: Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_C6662 dioxygenase, iron-sulfur subunit; Rieske (2Fe-2S) protein 1762952..1764067 Burkholderia cenocepacia AU 1054 4092874 YP_621468.1 CDS Bcen_1590 NC_008060.1 1764094 1764483 R KEGG: bur:Bcep18194_C6661 cytidine deaminase, homotetrameric TIGRFAM: Cytidine deaminase, homotetrameric; PFAM: CMP/dCMP deaminase, zinc-binding; cytidine deaminase complement(1764094..1764483) Burkholderia cenocepacia AU 1054 4092875 YP_621469.1 CDS deoA NC_008060.1 1764509 1765825 R Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase complement(1764509..1765825) Burkholderia cenocepacia AU 1054 4092876 YP_621470.1 CDS Bcen_1592 NC_008060.1 1765861 1767135 R PFAM: Na+ dependent nucleoside transporter; nucleoside recognition; Na+ dependent nucleoside transporter-like; KEGG: bur:Bcep18194_C6659 Na+ dependent nucleoside transporter; Na+ dependent nucleoside transporter-like complement(1765861..1767135) Burkholderia cenocepacia AU 1054 4092877 YP_621471.1 CDS Bcen_1593 NC_008060.1 1767384 1768841 R catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase complement(1767384..1768841) Burkholderia cenocepacia AU 1054 4092878 YP_621472.1 CDS Bcen_1594 NC_008060.1 1768910 1770418 R TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: bur:Bcep18194_C6657 cytosine/purines, uracil, thiamine, allantoin transporter; NCS1 nucleoside transporter complement(1768910..1770418) Burkholderia cenocepacia AU 1054 4092879 YP_621473.1 CDS Bcen_1595 NC_008060.1 1770519 1771832 R catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase complement(1770519..1771832) Burkholderia cenocepacia AU 1054 4092880 YP_621474.1 CDS Bcen_1596 NC_008060.1 1771888 1773225 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase complement(1771888..1773225) Burkholderia cenocepacia AU 1054 4092881 YP_621475.1 CDS Bcen_1597 NC_008060.1 1773353 1774633 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(1773353..1774633) Burkholderia cenocepacia AU 1054 4092882 YP_621476.1 CDS Bcen_1598 NC_008060.1 1774953 1775645 D PFAM: regulatory protein, TetR; Tetracycline transcriptional regulator YcdC-like-like; KEGG: bur:Bcep18194_C6653 transcriptional regulator, TetR family; TetR family transcriptional regulator 1774953..1775645 Burkholderia cenocepacia AU 1054 4092883 YP_621477.1 CDS Bcen_1599 NC_008060.1 1775782 1776972 R PFAM: Thiolase; KEGG: bur:Bcep18194_C6652 acetyl-CoA C-acetyltransferase; Acetyl-CoA C-acetyltransferase complement(1775782..1776972) Burkholderia cenocepacia AU 1054 4092884 YP_621478.1 CDS Bcen_1600 NC_008060.1 1776991 1777758 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C6651 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1776991..1777758) Burkholderia cenocepacia AU 1054 4092885 YP_621479.1 CDS Bcen_1601 NC_008060.1 1777772 1779439 R PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C6650 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(1777772..1779439) Burkholderia cenocepacia AU 1054 4092886 YP_621480.1 CDS Bcen_1602 NC_008060.1 1779583 1780587 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_C6649 transcriptional regulator, AraC family; AraC family transcriptional regulator 1779583..1780587 Burkholderia cenocepacia AU 1054 4092887 YP_621481.1 CDS Bcen_1603 NC_008060.1 1780751 1781350 D KEGG: bur:Bcep18194_C6644 hypothetical protein; hypothetical protein 1780751..1781350 Burkholderia cenocepacia AU 1054 4092888 YP_621482.1 CDS Bcen_1604 NC_008060.1 1781404 1781775 D KEGG: bur:Bcep18194_C6643 hypothetical protein; hypothetical protein 1781404..1781775 Burkholderia cenocepacia AU 1054 4092889 YP_621483.1 CDS Bcen_1605 NC_008060.1 1781907 1782386 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C6642 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1781907..1782386 Burkholderia cenocepacia AU 1054 4092890 YP_621484.1 CDS Bcen_1606 NC_008060.1 1788429 1789646 D KEGG: bur:Bcep18194_A5546 hypothetical protein; hypothetical protein 1788429..1789646 Burkholderia cenocepacia AU 1054 4093716 YP_621485.1 CDS Bcen_1607 NC_008060.1 1789857 1790693 D PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_A5547 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1789857..1790693 Burkholderia cenocepacia AU 1054 4093717 YP_621486.1 CDS Bcen_1608 NC_008060.1 1790770 1791444 D KEGG: bur:Bcep18194_A5548 membrane protein-like; hypothetical protein 1790770..1791444 Burkholderia cenocepacia AU 1054 4093718 YP_621487.1 CDS Bcen_1609 NC_008060.1 1791584 1792240 D KEGG: bur:Bcep18194_A5549 hypothetical protein; hypothetical protein 1791584..1792240 Burkholderia cenocepacia AU 1054 4093719 YP_621488.1 CDS Bcen_1610 NC_008060.1 1792324 1793478 R PFAM: peptidase M14, carboxypeptidase A; KEGG: bur:Bcep18194_A5550 peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A complement(1792324..1793478) Burkholderia cenocepacia AU 1054 4093720 YP_621489.1 CDS Bcen_1611 NC_008060.1 1793663 1794445 R PFAM: protein of unknown function DUF328; KEGG: bur:Bcep18194_A5551 protein of unknown function DUF328; hypothetical protein complement(1793663..1794445) Burkholderia cenocepacia AU 1054 4093721 YP_621490.1 CDS Bcen_1612 NC_008060.1 1794503 1795000 D TIGRFAM: Protein of unknown function DUF132; SMART: Nucleotide binding protein, PINc; KEGG: bur:Bcep18194_A5552 protein of unknown function DUF132; hypothetical protein 1794503..1795000 Burkholderia cenocepacia AU 1054 4093722 YP_621491.1 CDS Bcen_1613 NC_008060.1 1795028 1796200 D catalyzes the transfer of an amino moiety; aminotransferase 1795028..1796200 Burkholderia cenocepacia AU 1054 4093723 YP_621492.1 CDS Bcen_1614 NC_008060.1 1796242 1796898 R KEGG: bur:Bcep18194_A5554 glutathione S-transferase-like; glutathione S-transferase complement(1796242..1796898) Burkholderia cenocepacia AU 1054 4093724 YP_621493.1 CDS Bcen_1615 NC_008060.1 1797101 1797892 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1797101..1797892 Burkholderia cenocepacia AU 1054 4093725 YP_621494.1 CDS Bcen_1616 NC_008060.1 1798111 1798803 D PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_A5556 glutathione S-transferase-like; glutathione S-transferase 1798111..1798803 Burkholderia cenocepacia AU 1054 4093726 YP_621495.1 CDS Bcen_1617 NC_008060.1 1798851 1799327 R PFAM: MaoC-like dehydratase; KEGG: bur:Bcep18194_A5557 MaoC-like dehydratase; MaoC-like dehydratase complement(1798851..1799327) Burkholderia cenocepacia AU 1054 4093727 YP_621496.1 CDS Bcen_1618 NC_008060.1 1799324 1799827 R PFAM: MaoC-like dehydratase; KEGG: bur:Bcep18194_A5558 MaoC-like dehydratase; MaoC-like dehydratase complement(1799324..1799827) Burkholderia cenocepacia AU 1054 4093728 YP_621497.1 CDS Bcen_1619 NC_008060.1 1799824 1800957 R PFAM: acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_A5559 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase complement(1799824..1800957) Burkholderia cenocepacia AU 1054 4093729 YP_621498.1 CDS Bcen_1620 NC_008060.1 1800977 1802173 R PFAM: acyl-CoA dehydrogenase-like; KEGG: bur:Bcep18194_A5560 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase complement(1800977..1802173) Burkholderia cenocepacia AU 1054 4093730 YP_621499.1 CDS Bcen_1621 NC_008060.1 1802228 1802650 R PFAM: protein of unknown function DUF1178; KEGG: bur:Bcep18194_A5561 protein of unknown function DUF1178; hypothetical protein complement(1802228..1802650) Burkholderia cenocepacia AU 1054 4093731 YP_621500.1 CDS Bcen_1622 NC_008060.1 1802787 1803377 R PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A5562 NUDIX hydrolase; NUDIX hydrolase complement(1802787..1803377) Burkholderia cenocepacia AU 1054 4093732 YP_621501.1 CDS Bcen_1623 NC_008060.1 1803417 1803713 R KEGG: bur:Bcep18194_A5563 hypothetical protein; hypothetical protein complement(1803417..1803713) Burkholderia cenocepacia AU 1054 4093733 YP_621502.1 CDS Bcen_1624 NC_008060.1 1803713 1805179 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N complement(1803713..1805179) Burkholderia cenocepacia AU 1054 4093734 YP_621503.1 CDS Bcen_1625 NC_008060.1 1805204 1806694 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M complement(1805204..1806694) Burkholderia cenocepacia AU 1054 4093735 YP_621504.1 CDS Bcen_1626 NC_008060.1 1806713 1808767 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L complement(1806713..1808767) Burkholderia cenocepacia AU 1054 4093736 YP_621505.1 CDS Bcen_1627 NC_008060.1 1808785 1809090 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K complement(1808785..1809090) Burkholderia cenocepacia AU 1054 4093737 YP_621506.1 CDS Bcen_1628 NC_008060.1 1809109 1809759 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J complement(1809109..1809759) Burkholderia cenocepacia AU 1054 4093738 YP_621507.1 CDS Bcen_1629 NC_008060.1 1809872 1810360 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(1809872..1810360) Burkholderia cenocepacia AU 1054 4093739 YP_621508.1 CDS Bcen_1630 NC_008060.1 1810371 1811438 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(1810371..1811438) Burkholderia cenocepacia AU 1054 4093740 YP_621509.1 CDS Bcen_1631 NC_008060.1 1811439 1813769 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G complement(1811439..1813769) Burkholderia cenocepacia AU 1054 4093741 YP_621510.1 CDS Bcen_1632 NC_008060.1 1813852 1815162 R KEGG: bur:Bcep18194_A5572 NADH-quinone oxidoreductase, F subunit TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH-quinone oxidoreductase subunit F complement(1813852..1815162) Burkholderia cenocepacia AU 1054 4093742 YP_621511.1 CDS Bcen_1633 NC_008060.1 1815159 1815644 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E complement(1815159..1815644) Burkholderia cenocepacia AU 1054 4093743 YP_621512.1 CDS Bcen_1634 NC_008060.1 1815829 1817082 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D complement(1815829..1817082) Burkholderia cenocepacia AU 1054 4093744 YP_621513.1 CDS Bcen_1635 NC_008060.1 1817092 1817694 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C complement(1817092..1817694) Burkholderia cenocepacia AU 1054 4093745 YP_621514.1 CDS Bcen_1636 NC_008060.1 1817716 1818195 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(1817716..1818195) Burkholderia cenocepacia AU 1054 4093746 YP_621515.1 CDS Bcen_1637 NC_008060.1 1818258 1818617 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A complement(1818258..1818617) Burkholderia cenocepacia AU 1054 4093747 YP_621516.1 CDS secG NC_008060.1 1818966 1819343 R TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: bur:Bcep18194_A5578 preprotein translocase SecG subunit; preprotein translocase subunit SecG complement(1818966..1819343) Burkholderia cenocepacia AU 1054 4093508 YP_621517.1 CDS tpiA NC_008060.1 1819416 1820171 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(1819416..1820171) Burkholderia cenocepacia AU 1054 4093509 YP_621518.1 CDS Bcen_1640 NC_008060.1 1820312 1821331 R PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_A5580 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase complement(1820312..1821331) Burkholderia cenocepacia AU 1054 4093510 YP_621519.1 CDS Bcen_1641 NC_008060.1 1821480 1823627 R PFAM: 3' exoribonuclease; RNA binding S1; KH, type 1; SMART: KH; KEGG: bur:Bcep18194_A5581 3' exoribonuclease; polynucleotide phosphorylase/polyadenylase complement(1821480..1823627) Burkholderia cenocepacia AU 1054 4093511 YP_621520.1 CDS rpsO NC_008060.1 1823918 1824187 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(1823918..1824187) Burkholderia cenocepacia AU 1054 4093512 YP_621521.1 CDS Bcen_1643 NC_008060.1 1824295 1825620 R KEGG: bur:Bcep18194_A5583 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; branched chain amino acid ABC transporter periplasmic ligand-binding protein complement(1824295..1825620) Burkholderia cenocepacia AU 1054 4093513 YP_621522.1 CDS Bcen_1644 NC_008060.1 1825721 1826233 D KEGG: bur:Bcep18194_A5584 hypothetical protein; hypothetical protein 1825721..1826233 Burkholderia cenocepacia AU 1054 4093514 YP_621523.1 CDS Bcen_1646 NC_008060.1 1826617 1827261 D PFAM: carbonic anhydrase; KEGG: bur:Bcep18194_A5585 carbonate dehydratase; carbonate dehydratase 1826617..1827261 Burkholderia cenocepacia AU 1054 4093516 YP_621524.1 CDS Bcen_1647 NC_008060.1 1827303 1828853 D PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bur:Bcep18194_A5586 sulphate transporter; sulfate transporter 1827303..1828853 Burkholderia cenocepacia AU 1054 4093517 YP_621525.1 CDS Bcen_1648 NC_008060.1 1828926 1830470 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(1828926..1830470) Burkholderia cenocepacia AU 1054 4093518 YP_621526.1 CDS Bcen_1649 NC_008060.1 1830490 1830798 R hypothetical protein complement(1830490..1830798) Burkholderia cenocepacia AU 1054 4093519 YP_621527.1 CDS Bcen_1650 NC_008060.1 1830813 1831685 R TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bur:Bcep18194_A5588 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(1830813..1831685) Burkholderia cenocepacia AU 1054 4093520 YP_621528.1 CDS Bcen_1651 NC_008060.1 1831701 1832345 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(1831701..1832345) Burkholderia cenocepacia AU 1054 4093521 YP_621529.1 CDS Bcen_1652 NC_008060.1 1832473 1833489 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(1832473..1833489) Burkholderia cenocepacia AU 1054 4093522 YP_621530.1 CDS ilvH NC_008060.1 1833595 1834086 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(1833595..1834086) Burkholderia cenocepacia AU 1054 4093523 YP_621531.1 CDS Bcen_1654 NC_008060.1 1834198 1835961 R acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit complement(1834198..1835961) Burkholderia cenocepacia AU 1054 4093524 YP_621532.1 CDS Bcen_1655 NC_008060.1 1836317 1836880 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 1836317..1836880 Burkholderia cenocepacia AU 1054 4093525 YP_621533.1 CDS Bcen_1656 NC_008060.1 1836877 1837296 D KEGG: bur:Bcep18194_A5594 hypothetical protein; hypothetical protein 1836877..1837296 Burkholderia cenocepacia AU 1054 4093526 YP_621534.1 CDS Bcen_1657 NC_008060.1 1837323 1838090 D KEGG: bur:Bcep18194_A5595 hypothetical protein; hypothetical protein 1837323..1838090 Burkholderia cenocepacia AU 1054 4093527 YP_621535.1 CDS Bcen_1658 NC_008060.1 1838097 1838603 D PFAM: RDD; KEGG: bur:Bcep18194_A5596 RDD family protein; RDD domain-containing protein 1838097..1838603 Burkholderia cenocepacia AU 1054 4093528 YP_621536.1 CDS Bcen_1659 NC_008060.1 1838826 1839764 D PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_A5597 metallophosphoesterase; metallophosphoesterase 1838826..1839764 Burkholderia cenocepacia AU 1054 4093529 YP_621537.1 CDS Bcen_1660 NC_008060.1 1839793 1841358 D PFAM: diacylglycerol kinase; glycosyl transferase, group 1; KEGG: bur:Bcep18194_A5598 glycosyl transferase, group 1; diacylglycerol kinase 1839793..1841358 Burkholderia cenocepacia AU 1054 4093530 YP_621538.1 CDS Bcen_1661 NC_008060.1 1841560 1842318 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_A5600 transcriptional regulator, TetR family; TetR family transcriptional regulator 1841560..1842318 Burkholderia cenocepacia AU 1054 4093531 YP_621539.1 CDS Bcen_1662 NC_008060.1 1842315 1842896 D PFAM: conserved hypothetical protein 730; KEGG: bur:Bcep18194_A5601 hypothetical protein; hypothetical protein 1842315..1842896 Burkholderia cenocepacia AU 1054 4093532 YP_621540.1 CDS Bcen_1663 NC_008060.1 1842919 1843680 D Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase 1842919..1843680 Burkholderia cenocepacia AU 1054 4093533 YP_621541.1 CDS Bcen_1664 NC_008060.1 1843908 1845800 D KEGG: bur:Bcep18194_A5603 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family; glycosyltransferase 1843908..1845800 Burkholderia cenocepacia AU 1054 4093534 YP_621542.1 CDS Bcen_1665 NC_008060.1 1845973 1846590 R PFAM: protein of unknown function DUF924; KEGG: bur:Bcep18194_A5604 protein of unknown function DUF924; hypothetical protein complement(1845973..1846590) Burkholderia cenocepacia AU 1054 4093535 YP_621543.1 CDS Bcen_1666 NC_008060.1 1846587 1847318 R PFAM: Threonyl/alanyl tRNA synthetase, SAD; KEGG: bur:Bcep18194_A5605 alanyl-transfer RNA synthetase; threonyl/alanyl tRNA synthetase complement(1846587..1847318) Burkholderia cenocepacia AU 1054 4093536 YP_621544.1 CDS Bcen_1667 NC_008060.1 1847422 1847832 R PFAM: globin; KEGG: bur:Bcep18194_A5606 globin-like protein; globin complement(1847422..1847832) Burkholderia cenocepacia AU 1054 4093537 YP_621545.1 CDS Bcen_1668 NC_008060.1 1847877 1850492 R PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_A5607 protein of unknown function DUF214; hypothetical protein complement(1847877..1850492) Burkholderia cenocepacia AU 1054 4093538 YP_621546.1 CDS Bcen_1669 NC_008060.1 1850489 1851106 R KEGG: bur:Bcep18194_A5608 hypothetical protein; hypothetical protein complement(1850489..1851106) Burkholderia cenocepacia AU 1054 4093539 YP_621547.1 CDS Bcen_1670 NC_008060.1 1851324 1851644 R PFAM: small multidrug resistance protein; KEGG: bur:Bcep18194_A5609 small multidrug resistance protein; small multidrug resistance protein complement(1851324..1851644) Burkholderia cenocepacia AU 1054 4093540 YP_621548.1 CDS Bcen_1671 NC_008060.1 1851798 1852079 R PFAM: protein of unknown function DUF333; KEGG: bur:Bcep18194_A5610 protein of unknown function DUF333; hypothetical protein complement(1851798..1852079) Burkholderia cenocepacia AU 1054 4093541 YP_621549.1 CDS Bcen_1672 NC_008060.1 1852232 1852930 R PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A5611 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1852232..1852930) Burkholderia cenocepacia AU 1054 4093542 YP_621550.1 CDS Bcen_1673 NC_008060.1 1852923 1855766 R PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; Osmosensitive K+ channel His kinase sensor; UspA; KEGG: bur:Bcep18194_A5612 osmosensitive K+ channel signal transduction histidine kinase; osmosensitive K+ channel signal transduction histidine kinase complement(1852923..1855766) Burkholderia cenocepacia AU 1054 4093543 YP_621551.1 CDS Bcen_1674 NC_008060.1 1855920 1856501 R One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C complement(1855920..1856501) Burkholderia cenocepacia AU 1054 4093544 YP_621552.1 CDS Bcen_1675 NC_008060.1 1856527 1858611 R One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B complement(1856527..1858611) Burkholderia cenocepacia AU 1054 4093545 YP_621553.1 CDS Bcen_1676 NC_008060.1 1858666 1860471 R catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A complement(1858666..1860471) Burkholderia cenocepacia AU 1054 4091007 YP_621554.1 CDS Bcen_1677 NC_008060.1 1860468 1860599 R KEGG: bte:BTH_I1020 potassium-transporting ATPase, KdpF subunit-related protein; potassium-transporting ATPase, KdpF subunit-related protein complement(1860468..1860599) Burkholderia cenocepacia AU 1054 4091008 YP_621555.1 CDS Bcen_1678 NC_008060.1 1860883 1861857 R PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_A5617 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase complement(1860883..1861857) Burkholderia cenocepacia AU 1054 4091009 YP_621556.1 CDS mgsA NC_008060.1 1862030 1862422 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(1862030..1862422) Burkholderia cenocepacia AU 1054 4091010 YP_621557.1 CDS Bcen_1680 NC_008060.1 1862475 1863332 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A5619 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1862475..1863332) Burkholderia cenocepacia AU 1054 4091011 YP_621558.1 CDS upp NC_008060.1 1863415 1864113 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1863415..1864113 Burkholderia cenocepacia AU 1054 4091012 YP_621559.1 CDS Bcen_1682 NC_008060.1 1864342 1865070 D PFAM: protein of unknown function DUF28; KEGG: bur:Bcep18194_A5621 protein of unknown function DUF28; hypothetical protein 1864342..1865070 Burkholderia cenocepacia AU 1054 4091013 YP_621560.1 CDS Bcen_1683 NC_008060.1 1865176 1866456 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1865176..1866456 Burkholderia cenocepacia AU 1054 4091014 YP_621561.1 CDS Bcen_1684 NC_008060.1 1866527 1867498 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1866527..1867498 Burkholderia cenocepacia AU 1054 4091015 YP_621562.1 CDS Bcen_1685 NC_008060.1 1867507 1868238 D catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP; nicotinic acid mononucleotide adenylyltransferase 1867507..1868238 Burkholderia cenocepacia AU 1054 4091016 YP_621563.1 CDS Bcen_1686 NC_008060.1 1868243 1868686 D PFAM: Iojap-related protein; KEGG: bur:Bcep18194_A5625 iojap-related protein; Iojap-related protein 1868243..1868686 Burkholderia cenocepacia AU 1054 4091017 YP_621564.1 CDS Bcen_1687 NC_008060.1 1868705 1869175 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 1868705..1869175 Burkholderia cenocepacia AU 1054 4091018 YP_621565.1 CDS Bcen_1688 NC_008060.1 1869227 1869859 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1869227..1869859 Burkholderia cenocepacia AU 1054 4091019 YP_621566.1 CDS Bcen_1689 NC_008060.1 1869868 1871337 D TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1; KEGG: bur:Bcep18194_A5628 ribonuclease E and G; ribonuclease 1869868..1871337 Burkholderia cenocepacia AU 1054 4091020 YP_621567.1 CDS Bcen_1690 NC_008060.1 1871380 1871799 D PFAM: protein of unknown function DUF469; KEGG: bur:Bcep18194_A5643 protein of unknown function DUF469; hypothetical protein 1871380..1871799 Burkholderia cenocepacia AU 1054 4091021 YP_621568.1 CDS Bcen_1691 NC_008060.1 1872156 1873127 D KEGG: bur:Bcep18194_A5645 hypothetical protein; hypothetical protein 1872156..1873127 Burkholderia cenocepacia AU 1054 4091022 YP_621569.1 CDS Bcen_1692 NC_008060.1 1873124 1874383 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5646 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1873124..1874383 Burkholderia cenocepacia AU 1054 4091023 YP_621570.1 CDS Bcen_1693 NC_008060.1 1874426 1874992 D KEGG: bur:Bcep18194_A5647 membrane protein-like; membrane protein-like protein 1874426..1874992 Burkholderia cenocepacia AU 1054 4091024 YP_621571.1 CDS Bcen_1694 NC_008060.1 1875087 1875479 R KEGG: bur:Bcep18194_A5648 integral membrane protein-like; integral membrane protein-like complement(1875087..1875479) Burkholderia cenocepacia AU 1054 4091025 YP_621572.1 CDS Bcen_1695 NC_008060.1 1875573 1877444 R KEGG: bur:Bcep18194_A5649 lipid A export ATP-binding/permease protein MsbA TIGRFAM: Lipid A export ATP-binding/permease protein MsbA; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: ATPase; Lipid A export ATP-binding/permease protein MsbA complement(1875573..1877444) Burkholderia cenocepacia AU 1054 4091026 YP_621573.1 CDS Bcen_1696 NC_008060.1 1877549 1878301 D PFAM: glycosyl transferase, family 2; KEGG: bur:Bcep18194_A5650 glycosyl transferase, family 2; glycosyl transferase family protein 1877549..1878301 Burkholderia cenocepacia AU 1054 4091027 YP_621574.1 CDS Bcen_1697 NC_008060.1 1878464 1879306 D PFAM: glycosyl transferase, family 2; KEGG: bur:Bcep18194_A5651 glycosyl transferase, family 2; glycosyl transferase family protein 1878464..1879306 Burkholderia cenocepacia AU 1054 4091028 YP_621575.1 CDS Bcen_1698 NC_008060.1 1879445 1880725 D PFAM: O-antigen polymerase; KEGG: bur:Bcep18194_A5652 O-antigen polymerase; O-antigen polymerase 1879445..1880725 Burkholderia cenocepacia AU 1054 4091029 YP_621576.1 CDS Bcen_1699 NC_008060.1 1880849 1882027 R PFAM: glycosyl transferase, family 9; KEGG: bur:Bcep18194_A5653 glycosyl transferase, family 9; glycosyl transferase family protein complement(1880849..1882027) Burkholderia cenocepacia AU 1054 4091030 YP_621577.1 CDS Bcen_1700 NC_008060.1 1882176 1883270 R PFAM: glycosyl transferase, family 9; KEGG: bur:Bcep18194_A5654 glycosyl transferase, family 9; glycosyl transferase family protein complement(1882176..1883270) Burkholderia cenocepacia AU 1054 4091031 YP_621578.1 CDS dnaE NC_008060.1 1883579 1887112 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(1883579..1887112) Burkholderia cenocepacia AU 1054 4091032 YP_621579.1 CDS Bcen_1702 NC_008060.1 1887179 1888183 D PFAM: Rhodanese-like; KEGG: bur:Bcep18194_A5656 rhodanese-like protein; rhodanese superfamily protein 1887179..1888183 Burkholderia cenocepacia AU 1054 4091033 YP_621580.1 CDS Bcen_1703 NC_008060.1 1888209 1889105 D this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 1888209..1889105 Burkholderia cenocepacia AU 1054 4091034 YP_621581.1 CDS Bcen_1704 NC_008060.1 1889369 1890931 R PFAM: helicase-like; DEAD/DEAH box helicase; KEGG: bur:Bcep18194_A5658 DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(1889369..1890931) Burkholderia cenocepacia AU 1054 4091035 YP_621582.1 CDS Bcen_1705 NC_008060.1 1891319 1891699 R KEGG: bur:Bcep18194_A5659 periplasmic protein; periplasmic protein complement(1891319..1891699) Burkholderia cenocepacia AU 1054 4091036 YP_621583.1 CDS Bcen_1706 NC_008060.1 1891787 1891972 R KEGG: bur:Bcep18194_A5660 hypothetical protein; hypothetical protein complement(1891787..1891972) Burkholderia cenocepacia AU 1054 4091037 YP_621584.1 CDS purT NC_008060.1 1891991 1893205 R non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 complement(1891991..1893205) Burkholderia cenocepacia AU 1054 4091038 YP_621585.1 CDS Bcen_1708 NC_008060.1 1893423 1893968 D PFAM: protein of unknown function DUF306, Meta and HslJ; KEGG: bur:Bcep18194_A5662 protein of unknown function DUF306, MetA and HslJ; hypothetical protein 1893423..1893968 Burkholderia cenocepacia AU 1054 4091039 YP_621586.1 CDS Bcen_1709 NC_008060.1 1894146 1898729 D PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase; KEGG: bur:Bcep18194_A5663 cell division FtsK/SpoIIIE; cell division protein FtsK 1894146..1898729 Burkholderia cenocepacia AU 1054 4091040 YP_621587.1 CDS Bcen_1710 NC_008060.1 1898850 1900097 R KEGG: bur:Bcep18194_A5664 3-carboxymuconate cyclase-like; 3-carboxymuconate cyclase-like complement(1898850..1900097) Burkholderia cenocepacia AU 1054 4091041 YP_621588.1 CDS Bcen_1711 NC_008060.1 1900265 1902094 D PFAM: glycoside hydrolase 15-related; KEGG: bur:Bcep18194_A5665 glycoside hydrolase 15-related; glycoside hydrolase 15-related 1900265..1902094 Burkholderia cenocepacia AU 1054 4091042 YP_621589.1 CDS Bcen_1712 NC_008060.1 1902306 1903796 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase-like; KEGG: bur:Bcep18194_A5666 polyhydroxyalkanoate depolymerase; polyhydroxyalkanoate depolymerase, intracellular 1902306..1903796 Burkholderia cenocepacia AU 1054 4091043 YP_621590.1 CDS Bcen_1713 NC_008060.1 1903906 1904538 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_A5667 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1903906..1904538) Burkholderia cenocepacia AU 1054 4091044 YP_621591.1 CDS Bcen_1714 NC_008060.1 1904695 1905723 D Involved in the electron transport chain; ferredoxin 1904695..1905723 Burkholderia cenocepacia AU 1054 4091045 YP_621592.1 CDS Bcen_1715 NC_008060.1 1905720 1906364 D TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD; KEGG: bur:Bcep18194_A5669 endonuclease III/Nth; endonuclease III 1905720..1906364 Burkholderia cenocepacia AU 1054 4092913 YP_621593.1 CDS Bcen_1716 NC_008060.1 1906425 1907354 R PFAM: protein of unknown function DUF6, transmembrane; Protein of unknown function DUF250; KEGG: bur:Bcep18194_A5670 protein of unknown function DUF6, transmembrane; hypothetical protein complement(1906425..1907354) Burkholderia cenocepacia AU 1054 4092914 YP_621594.1 CDS Bcen_1717 NC_008060.1 1907534 1908001 D KEGG: bur:Bcep18194_A5671 hypothetical protein; hypothetical protein 1907534..1908001 Burkholderia cenocepacia AU 1054 4092915 YP_621595.1 CDS Bcen_1718 NC_008060.1 1908140 1908499 R PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_A5672 cytochrome c, class I; cytochrome c, class I complement(1908140..1908499) Burkholderia cenocepacia AU 1054 4092916 YP_621596.1 CDS Bcen_1719 NC_008060.1 1908540 1908899 R PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_A5673 cytochrome c, class I; cytochrome c, class I complement(1908540..1908899) Burkholderia cenocepacia AU 1054 4092917 YP_621597.1 CDS Bcen_1720 NC_008060.1 1909126 1909986 D PFAM: ATPase AAA; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: bur:Bcep18194_A5674 AAA ATPase; ATPase 1909126..1909986 Burkholderia cenocepacia AU 1054 4092918 YP_621598.1 CDS Bcen_1721 NC_008060.1 1910015 1911190 D PFAM: VWA containing CoxE-like; KEGG: bur:Bcep18194_A5675 hypothetical protein; VWA containing CoxE-like 1910015..1911190 Burkholderia cenocepacia AU 1054 4092919 YP_621599.1 CDS Bcen_1722 NC_008060.1 1911246 1912457 D TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_A5676 benzoate membrane transport protein; benzoate transporter 1911246..1912457 Burkholderia cenocepacia AU 1054 4092920 YP_621600.1 CDS Bcen_1723 NC_008060.1 1912639 1913592 D KEGG: bur:Bcep18194_A5677 transaldolase AB TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 1912639..1913592 Burkholderia cenocepacia AU 1054 4092921 YP_621601.1 CDS Bcen_1724 NC_008060.1 1913833 1914288 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bur:Bcep18194_A5678 glyoxalase/bleomycin resistance protein; glyoxalase/bleomycin resistance protein/dioxygenase 1913833..1914288 Burkholderia cenocepacia AU 1054 4092922 YP_621602.1 CDS Bcen_1725 NC_008060.1 1914387 1915937 R PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_A5680 Na+/solute symporter; Na+/solute symporter complement(1914387..1915937) Burkholderia cenocepacia AU 1054 4092923 YP_621603.1 CDS Bcen_1726 NC_008060.1 1915934 1916176 R KEGG: bur:Bcep18194_A5681 hypothetical protein; hypothetical protein complement(1915934..1916176) Burkholderia cenocepacia AU 1054 4092924 YP_621604.1 CDS Bcen_1727 NC_008060.1 1916375 1917292 R KEGG: bur:Bcep18194_A5682 spermidine synthase-like; spermidine synthase complement(1916375..1917292) Burkholderia cenocepacia AU 1054 4092925 YP_621605.1 CDS Bcen_1729 NC_008060.1 1917958 1918653 D KEGG: ana:all4904 similar to mobilization protein MobD; hypothetical protein 1917958..1918653 Burkholderia cenocepacia AU 1054 4092927 YP_621606.1 CDS Bcen_1730 NC_008060.1 1918728 1919531 D hypothetical protein 1918728..1919531 Burkholderia cenocepacia AU 1054 4092928 YP_621607.1 CDS Bcen_1731 NC_008060.1 1919694 1920326 D KEGG: hch:HCH_05728 probable transcriptional regulator; transcriptional regulator 1919694..1920326 Burkholderia cenocepacia AU 1054 4092929 YP_621608.1 CDS Bcen_1732 NC_008060.1 1920310 1920738 D KEGG: hch:HCH_05727 hypothetical protein; hypothetical protein 1920310..1920738 Burkholderia cenocepacia AU 1054 4092930 YP_621609.1 CDS Bcen_1733 NC_008060.1 1920774 1921250 R KEGG: bur:Bcep18194_A5684 G-T/U mismatch-specific DNA glycosylase-like; G-T/U mismatch-specific DNA glycosylase-like protein complement(1920774..1921250) Burkholderia cenocepacia AU 1054 4092931 YP_621610.1 CDS Bcen_1734 NC_008060.1 1921250 1921846 R PFAM: Chorismate lyase; KEGG: bur:Bcep18194_A5685 chorismate lyase; chorismate lyase complement(1921250..1921846) Burkholderia cenocepacia AU 1054 4092932 YP_621611.1 CDS Bcen_1735 NC_008060.1 1921855 1923753 R molecular chaperone; heat shock protein 90 complement(1921855..1923753) Burkholderia cenocepacia AU 1054 4092933 YP_621612.1 CDS Bcen_1736 NC_008060.1 1923968 1925428 R PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: bur:Bcep18194_A5687 transcriptional regulator, GntR family with aminotransfersase activity; GntR family transcriptional regulator complement(1923968..1925428) Burkholderia cenocepacia AU 1054 4092934 YP_621613.1 CDS Bcen_1737 NC_008060.1 1925586 1926356 D KEGG: bur:Bcep18194_A5688 hypothetical protein; hypothetical protein 1925586..1926356 Burkholderia cenocepacia AU 1054 4092935 YP_621614.1 CDS Bcen_1738 NC_008060.1 1926424 1927332 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_A5689 protein of unknown function DUF6, transmembrane; hypothetical protein 1926424..1927332 Burkholderia cenocepacia AU 1054 4092936 YP_621615.1 CDS Bcen_1739 NC_008060.1 1927499 1928680 D PFAM: aminotransferase, class I and II; KEGG: bur:Bcep18194_A5690 aminotransferase, class I and II; class I and II aminotransferase 1927499..1928680 Burkholderia cenocepacia AU 1054 4092937 YP_621616.1 CDS Bcen_1740 NC_008060.1 1928723 1929181 D PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_A5691 endoribonuclease L-PSP; endoribonuclease L-PSP 1928723..1929181 Burkholderia cenocepacia AU 1054 4092938 YP_621617.1 CDS Bcen_1741 NC_008060.1 1929195 1930079 D PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bur:Bcep18194_A5692 phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis PhzC/PhzF protein 1929195..1930079 Burkholderia cenocepacia AU 1054 4092939 YP_621618.1 CDS Bcen_1742 NC_008060.1 1930262 1932634 D TIGRFAM: GGDEF domain; PFAM: GGDEF; EAL; KEGG: bur:Bcep18194_A5693 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 1930262..1932634 Burkholderia cenocepacia AU 1054 4092940 YP_621619.1 CDS Bcen_1743 NC_008060.1 1932740 1934041 D PFAM: Chromate transporter; KEGG: bur:Bcep18194_A5694 chromate transport protein ChrA-like; chromate transporter 1932740..1934041 Burkholderia cenocepacia AU 1054 4092941 YP_621620.1 CDS Bcen_1744 NC_008060.1 1934087 1934545 R PFAM: transmembrane pair; KEGG: bur:Bcep18194_A5695 transmembrane protein; transmembrane pair complement(1934087..1934545) Burkholderia cenocepacia AU 1054 4092942 YP_621621.1 CDS Bcen_1745 NC_008060.1 1934646 1935530 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5696 transcriptional regulator, LysR family; LysR family transcriptional regulator 1934646..1935530 Burkholderia cenocepacia AU 1054 4092943 YP_621622.1 CDS Bcen_1746 NC_008060.1 1935589 1936047 R KEGG: bur:Bcep18194_A5697 integral membrane protein-like; integral membrane protein-like complement(1935589..1936047) Burkholderia cenocepacia AU 1054 4092944 YP_621623.1 CDS Bcen_1747 NC_008060.1 1936305 1938626 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(1936305..1938626) Burkholderia cenocepacia AU 1054 4092945 YP_621624.1 CDS Bcen_1748 NC_008060.1 1938697 1940679 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(1938697..1940679) Burkholderia cenocepacia AU 1054 4092946 YP_621625.1 CDS Bcen_1749 NC_008060.1 1940900 1942885 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5700 ABC transporter, fused ATPase subunits; ABC transporter complement(1940900..1942885) Burkholderia cenocepacia AU 1054 4092947 YP_621626.1 CDS Bcen_1750 NC_008060.1 1943117 1943566 R KEGG: bur:Bcep18194_A5701 hypothetical protein; hypothetical protein complement(1943117..1943566) Burkholderia cenocepacia AU 1054 4092948 YP_621627.1 CDS Bcen_1751 NC_008060.1 1943720 1943902 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bur:Bcep18194_A5702 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 1943720..1943902 Burkholderia cenocepacia AU 1054 4092949 YP_621628.1 CDS Bcen_1752 NC_008060.1 1944289 1945503 D PFAM: phage integrase; KEGG: bpm:BURPS1710b_1290 prophage CP4-like integrase; phage integrase 1944289..1945503 Burkholderia cenocepacia AU 1054 4092066 YP_621629.1 CDS Bcen_1753 NC_008060.1 1945597 1946682 R hypothetical protein complement(1945597..1946682) Burkholderia cenocepacia AU 1054 4092067 YP_621630.1 CDS Bcen_1754 NC_008060.1 1947208 1950084 R KEGG: bpm:BURPS1710b_1288 inner membrane protein; inner membrane protein complement(1947208..1950084) Burkholderia cenocepacia AU 1054 4092068 YP_621631.1 CDS Bcen_1755 NC_008060.1 1950197 1950523 R KEGG: bpm:BURPS1710b_1287 hypothetical protein; hypothetical protein complement(1950197..1950523) Burkholderia cenocepacia AU 1054 4092069 YP_621632.1 CDS Bcen_1756 NC_008060.1 1950534 1950881 R KEGG: bpm:BURPS1710b_0310 hypothetical protein; hypothetical protein complement(1950534..1950881) Burkholderia cenocepacia AU 1054 4092070 YP_621633.1 CDS Bcen_1757 NC_008060.1 1951043 1951507 D hypothetical protein 1951043..1951507 Burkholderia cenocepacia AU 1054 4092071 YP_621634.1 CDS Bcen_1758 NC_008060.1 1951911 1952198 R KEGG: bpm:BURPS1710b_1286 hypothetical protein; hypothetical protein complement(1951911..1952198) Burkholderia cenocepacia AU 1054 4092072 YP_621635.1 CDS Bcen_1759 NC_008060.1 1952195 1952524 R PFAM: Prophage CP4-57 regulatory; KEGG: rso:RSc1869 hypothetical protein; phage transcriptional regulator, AlpA complement(1952195..1952524) Burkholderia cenocepacia AU 1054 4092073 YP_621636.1 CDS Bcen_1760 NC_008060.1 1952577 1953572 R KEGG: bpm:BURPS1710b_1285 hypothetical protein; hypothetical protein complement(1952577..1953572) Burkholderia cenocepacia AU 1054 4092074 YP_621637.1 CDS Bcen_1761 NC_008060.1 1953638 1954951 R hypothetical protein complement(1953638..1954951) Burkholderia cenocepacia AU 1054 4092075 YP_621638.1 CDS Bcen_1762 NC_008060.1 1955297 1955875 D PFAM: Resolvase-like; Resolvase helix-turn-helix region; KEGG: bte:BTH_I3231 transposon Tn2501 resolvase; resolvase-like protein 1955297..1955875 Burkholderia cenocepacia AU 1054 4092076 YP_621639.1 CDS Bcen_1763 NC_008060.1 1955886 1956836 R hypothetical protein complement(1955886..1956836) Burkholderia cenocepacia AU 1054 4092077 YP_621640.1 CDS Bcen_1764 NC_008060.1 1957410 1957820 D KEGG: bte:BTH_I0928 site-specific recombinase, phage integrase family; hypothetical protein 1957410..1957820 Burkholderia cenocepacia AU 1054 4092078 YP_621641.1 CDS Bcen_1765 NC_008060.1 1957898 1958218 R hypothetical protein complement(1957898..1958218) Burkholderia cenocepacia AU 1054 4092079 YP_621642.1 CDS Bcen_1766 NC_008060.1 1959078 1959299 R KEGG: bur:Bcep18194_B1045 hypothetical protein; hypothetical protein complement(1959078..1959299) Burkholderia cenocepacia AU 1054 4092080 YP_621643.1 CDS Bcen_1767 NC_008060.1 1959384 1960436 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: gox:GOX1928 hypothetical protein; phytanoyl-CoA dioxygenase 1959384..1960436 Burkholderia cenocepacia AU 1054 4092081 YP_621644.1 CDS Bcen_1768 NC_008060.1 1960758 1961534 R PFAM: O-methyltransferase, family 3; KEGG: bur:Bcep18194_C6637 O-methyltransferase, family 3; O-methyltransferase family protein complement(1960758..1961534) Burkholderia cenocepacia AU 1054 4092082 YP_621645.1 CDS Bcen_1769 NC_008060.1 1961581 1961877 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: bur:Bcep18194_C6638 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin complement(1961581..1961877) Burkholderia cenocepacia AU 1054 4092083 YP_621646.1 CDS Bcen_1770 NC_008060.1 1961880 1962188 R KEGG: bur:Bcep18194_C6639 hypothetical protein; hypothetical protein complement(1961880..1962188) Burkholderia cenocepacia AU 1054 4092084 YP_621647.1 CDS Bcen_1771 NC_008060.1 1962201 1962782 R PFAM: sigma-70 region 2; sigma-70 region 4; Sigma-70, region 4 type 2; KEGG: bur:Bcep18194_C6640 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor complement(1962201..1962782) Burkholderia cenocepacia AU 1054 4092085 YP_621648.1 CDS Bcen_1772 NC_008060.1 1963085 1963576 D KEGG: bur:Bcep18194_A5710 hypothetical protein; hypothetical protein 1963085..1963576 Burkholderia cenocepacia AU 1054 4092087 YP_621649.1 CDS Bcen_1773 NC_008060.1 1963637 1964377 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A5711 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1963637..1964377) Burkholderia cenocepacia AU 1054 4092088 YP_621650.1 CDS Bcen_1774 NC_008060.1 1964493 1965116 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_A5712 transcriptional regulator, TetR family; TetR family transcriptional regulator 1964493..1965116 Burkholderia cenocepacia AU 1054 4092089 YP_621651.1 CDS Bcen_1775 NC_008060.1 1965143 1965643 R serine protease inhibitor, inhibits trypsin and other proteases; ecotin complement(1965143..1965643) Burkholderia cenocepacia AU 1054 4092090 YP_621652.1 CDS Bcen_1776 NC_008060.1 1965787 1966113 D KEGG: bur:Bcep18194_A5714 hypothetical protein; hypothetical protein 1965787..1966113 Burkholderia cenocepacia AU 1054 4092091 YP_621653.1 CDS Bcen_1777 NC_008060.1 1966311 1966712 R KEGG: bur:Bcep18194_A5715 hypothetical protein; hypothetical protein complement(1966311..1966712) Burkholderia cenocepacia AU 1054 4092092 YP_621654.1 CDS Bcen_1778 NC_008060.1 1966830 1967210 D KEGG: bur:Bcep18194_A5716 hypothetical protein; hypothetical protein 1966830..1967210 Burkholderia cenocepacia AU 1054 4092093 YP_621655.1 CDS Bcen_1779 NC_008060.1 1967393 1968760 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5717 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1967393..1968760 Burkholderia cenocepacia AU 1054 4092094 YP_621656.1 CDS Bcen_1780 NC_008060.1 1968795 1969388 R KEGG: bur:Bcep18194_A5718 ATPase-like; ATPase-like protein complement(1968795..1969388) Burkholderia cenocepacia AU 1054 4092095 YP_621657.1 CDS Bcen_1781 NC_008060.1 1969381 1970802 R KEGG: bur:Bcep18194_A5719 alpha,alpha-trehalose-phosphate synthase (UDP-forming) TIGRFAM: Alpha,alpha-trehalose-phosphate synthase; PFAM: glycosyl transferase, family 20; Alpha,alpha-trehalose-phosphate synthase complement(1969381..1970802) Burkholderia cenocepacia AU 1054 4092096 YP_621658.1 CDS Bcen_1782 NC_008060.1 1970941 1971165 R KEGG: bur:Bcep18194_A5720 hypothetical protein; hypothetical protein complement(1970941..1971165) Burkholderia cenocepacia AU 1054 4092097 YP_621659.1 CDS Bcen_1783 NC_008060.1 1971400 1971990 D KEGG: bur:Bcep18194_A5721 hypothetical protein; hypothetical protein 1971400..1971990 Burkholderia cenocepacia AU 1054 4092098 YP_621660.1 CDS Bcen_1784 NC_008060.1 1971987 1972481 D KEGG: bur:Bcep18194_A5722 hypothetical protein; hypothetical protein 1971987..1972481 Burkholderia cenocepacia AU 1054 4092099 YP_621661.1 CDS Bcen_1785 NC_008060.1 1972560 1973897 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5724 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit; ABC transporter complement(1972560..1973897) Burkholderia cenocepacia AU 1054 4092100 YP_621662.1 CDS Bcen_1786 NC_008060.1 1973920 1975677 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5725 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1973920..1975677) Burkholderia cenocepacia AU 1054 4092101 YP_621663.1 CDS Bcen_1787 NC_008060.1 1976182 1976448 D KEGG: bur:Bcep18194_A5726 hypothetical protein; hypothetical protein 1976182..1976448 Burkholderia cenocepacia AU 1054 4092102 YP_621664.1 CDS Bcen_1788 NC_008060.1 1976544 1977809 R PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; KEGG: bur:Bcep18194_A5727 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase complement(1976544..1977809) Burkholderia cenocepacia AU 1054 4092103 YP_621665.1 CDS Bcen_1789 NC_008060.1 1977793 1978518 R PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A5728 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1977793..1978518) Burkholderia cenocepacia AU 1054 4093334 YP_621666.1 CDS Bcen_1790 NC_008060.1 1978743 1979297 D KEGG: bur:Bcep18194_A5729 hypothetical protein; hypothetical protein 1978743..1979297 Burkholderia cenocepacia AU 1054 4093335 YP_621667.1 CDS Bcen_1791 NC_008060.1 1979365 1980165 R PFAM: Pirin-like; KEGG: bur:Bcep18194_A5730 pirin-like protein; Pirin-like protein complement(1979365..1980165) Burkholderia cenocepacia AU 1054 4093336 YP_621668.1 CDS Bcen_1792 NC_008060.1 1980435 1981217 D TIGRFAM: Lysine-arginine-ornithine-binding periplasmic protein; PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_A5731 ABC lysine-arginine-ornithine family transporter, periplasmic ligand binding protein; lysine-arginine-ornithine-binding periplasmic protein 1980435..1981217 Burkholderia cenocepacia AU 1054 4093337 YP_621669.1 CDS Bcen_1793 NC_008060.1 1981444 1982133 D TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5732 ABC amino acid transporter, inner membrane subunit; amino acid ABC transporter permease 1981444..1982133 Burkholderia cenocepacia AU 1054 4093338 YP_621670.1 CDS Bcen_1794 NC_008060.1 1982130 1982843 D TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5733 ABC amino acid transporter, inner membrane subunit; amino acid ABC transporter permease 1982130..1982843 Burkholderia cenocepacia AU 1054 4093339 YP_621671.1 CDS Bcen_1795 NC_008060.1 1982862 1983641 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5734 ABC amino acid transporter, ATPase subunit; ABC transporter 1982862..1983641 Burkholderia cenocepacia AU 1054 4093340 YP_621672.1 CDS Bcen_1796 NC_008060.1 1983706 1984293 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5735 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1983706..1984293) Burkholderia cenocepacia AU 1054 4093341 YP_621673.1 CDS Bcen_1797 NC_008060.1 1984348 1985274 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5736 transcriptional regulator, LysR family; LysR family transcriptional regulator 1984348..1985274 Burkholderia cenocepacia AU 1054 4093342 YP_621674.1 CDS Bcen_1798 NC_008060.1 1985818 1986897 D KEGG: bur:Bcep18194_A5737 outer membrane protein (porin)-like; outer membrane protein (porin)-like 1985818..1986897 Burkholderia cenocepacia AU 1054 4093343 YP_621675.1 CDS Bcen_1799 NC_008060.1 1987076 1987414 R PFAM: nitrogen regulatory protein P-II; KEGG: bur:Bcep18194_A5738 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II complement(1987076..1987414) Burkholderia cenocepacia AU 1054 4093344 YP_621676.1 CDS nadE NC_008060.1 1987498 1989216 R NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(1987498..1989216) Burkholderia cenocepacia AU 1054 4093345 YP_621677.1 CDS Bcen_1801 NC_008060.1 1989326 1990504 D PFAM: protein of unknown function DUF482; KEGG: bur:Bcep18194_A5740 protein of unknown function DUF482; hypothetical protein 1989326..1990504 Burkholderia cenocepacia AU 1054 4093346 YP_621678.1 CDS Bcen_1802 NC_008060.1 1990576 1992831 R PFAM: glycoside hydrolase, family 3-like; KEGG: bur:Bcep18194_B1822 beta-glucosidase; Beta-glucosidase complement(1990576..1992831) Burkholderia cenocepacia AU 1054 4093347 YP_621679.1 CDS Bcen_1803 NC_008060.1 1992929 1994017 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_A5742 transcriptional regulator, AraC family; AraC family transcriptional regulator 1992929..1994017 Burkholderia cenocepacia AU 1054 4093348 YP_621680.1 CDS Bcen_1804 NC_008060.1 1994067 1994954 D PFAM: Excinuclease ABC, C subunit-like; KEGG: bur:Bcep18194_A5743 excinuclease ABC, C subunit-like; excinuclease ABC subunit C 1994067..1994954 Burkholderia cenocepacia AU 1054 4093349 YP_621681.1 CDS Bcen_1805 NC_008060.1 1995009 1995536 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(1995009..1995536) Burkholderia cenocepacia AU 1054 4093350 YP_621682.1 CDS Bcen_1806 NC_008060.1 1995926 1997365 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_A5745 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase 1995926..1997365 Burkholderia cenocepacia AU 1054 4093351 YP_621683.1 CDS fabG NC_008060.1 1997451 1998209 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1997451..1998209 Burkholderia cenocepacia AU 1054 4093352 YP_621684.1 CDS Bcen_1808 NC_008060.1 1998405 1999709 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5747 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1998405..1999709 Burkholderia cenocepacia AU 1054 4093353 YP_621685.1 CDS Bcen_1809 NC_008060.1 1999960 2000373 D TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: bur:Bcep18194_A5748 excisionase/Xis, DNA-binding; excisionase/Xis, DNA-binding 1999960..2000373 Burkholderia cenocepacia AU 1054 4093354 YP_621686.1 CDS Bcen_1810 NC_008060.1 2000370 2001596 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A5749 alpha/beta hydrolase; alpha/beta hydrolase 2000370..2001596 Burkholderia cenocepacia AU 1054 4093355 YP_621687.1 CDS Bcen_1811 NC_008060.1 2001695 2002882 R PFAM: HemY-like; Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: bur:Bcep18194_A5750 HemY-like protein; HemY-like complement(2001695..2002882) Burkholderia cenocepacia AU 1054 4093356 YP_621688.1 CDS Bcen_1812 NC_008060.1 2002885 2004855 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis; bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase complement(2002885..2004855) Burkholderia cenocepacia AU 1054 4093357 YP_621689.2 CDS hemC NC_008060.1 2004855 2005859 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(2004855..2005859) Burkholderia cenocepacia AU 1054 4093358 YP_621690.1 CDS Bcen_1814 NC_008060.1 2006113 2009097 D catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 2006113..2009097 Burkholderia cenocepacia AU 1054 4093359 YP_621691.1 CDS Bcen_1815 NC_008060.1 2009232 2009984 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A5754 UbiE/COQ5 methyltransferase; methyltransferase type 11 complement(2009232..2009984) Burkholderia cenocepacia AU 1054 4093360 YP_621692.1 CDS Bcen_1816 NC_008060.1 2010211 2011020 D SMART: Helix-turn-helix type 3; KEGG: bur:Bcep18194_A5755 transcriptional regulator, XRE family; XRE family transcriptional regulator 2010211..2011020 Burkholderia cenocepacia AU 1054 4093361 YP_621693.1 CDS Bcen_1817 NC_008060.1 2011037 2012002 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902; KEGG: gme:Gmet_3429 IS111A/IS1328/IS1533/IS116/IS110/IS902 transposase; transposase IS116/IS110/IS902 complement(2011037..2012002) Burkholderia cenocepacia AU 1054 4093362 YP_621694.1 CDS Bcen_1818 NC_008060.1 2012307 2013716 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2012307..2013716 Burkholderia cenocepacia AU 1054 4093363 YP_621695.1 CDS Bcen_1819 NC_008060.1 2013804 2014496 D TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_A5761 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase 2013804..2014496 Burkholderia cenocepacia AU 1054 4093364 YP_621696.1 CDS Bcen_1820 NC_008060.1 2014586 2015401 R KEGG: bur:Bcep18194_A5762 hypothetical protein; hypothetical protein complement(2014586..2015401) Burkholderia cenocepacia AU 1054 4093365 YP_621697.1 CDS Bcen_1821 NC_008060.1 2015401 2017680 R PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase-like; KEGG: bur:Bcep18194_A5763 lysine decarboxylase; lysine decarboxylase complement(2015401..2017680) Burkholderia cenocepacia AU 1054 4093366 YP_621698.1 CDS dcd NC_008060.1 2017762 2018331 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(2017762..2018331) Burkholderia cenocepacia AU 1054 4093367 YP_621699.1 CDS Bcen_1823 NC_008060.1 2018445 2018981 R PFAM: superoxide dismutase, copper/zinc binding; KEGG: bur:Bcep18194_A5765 copper/zinc superoxide dismutase; superoxide dismutase, copper/zinc binding complement(2018445..2018981) Burkholderia cenocepacia AU 1054 4093368 YP_621700.1 CDS Bcen_1824 NC_008060.1 2019115 2020206 R PFAM: Cobyrinic acid a,c-diamide synthase; protein of unknown function DUF59; KEGG: bur:Bcep18194_A5766 hypothetical protein; cobyrinic acid a,c-diamide synthase complement(2019115..2020206) Burkholderia cenocepacia AU 1054 4093369 YP_621701.1 CDS Bcen_1825 NC_008060.1 2020559 2021206 D PFAM: OmpA/MotB; 17 kDa surface antigen; KEGG: bur:Bcep18194_A5767 OmpA/MotB family protein; OmpA/MotB 2020559..2021206 Burkholderia cenocepacia AU 1054 4093370 YP_621702.2 CDS metG NC_008060.1 2021586 2023742 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2021586..2023742 Burkholderia cenocepacia AU 1054 4093371 YP_621703.1 CDS Bcen_1827 NC_008060.1 2023837 2027880 R PFAM: protein of unknown function DUF490; KEGG: bur:Bcep18194_A5769 protein of unknown function DUF490; hypothetical protein complement(2023837..2027880) Burkholderia cenocepacia AU 1054 4093372 YP_621704.1 CDS Bcen_1828 NC_008060.1 2027921 2029735 R PFAM: surface antigen (D15); surface antigen variable number; KEGG: bur:Bcep18194_A5770 surface antigen (D15); surface antigen (D15) complement(2027921..2029735) Burkholderia cenocepacia AU 1054 4091046 YP_621705.1 CDS Bcen_1829 NC_008060.1 2029985 2030173 D KEGG: bur:Bcep18194_A5771 hypothetical protein; hypothetical protein 2029985..2030173 Burkholderia cenocepacia AU 1054 4091047 YP_621706.1 CDS Bcen_1830 NC_008060.1 2030178 2031050 D PFAM: chromosome segregation and condensation protein ScpA; KEGG: bur:Bcep18194_A5772 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 2030178..2031050 Burkholderia cenocepacia AU 1054 4091048 YP_621707.1 CDS panC NC_008060.1 2031313 2032152 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2031313..2032152 Burkholderia cenocepacia AU 1054 4091049 YP_621708.1 CDS Bcen_1832 NC_008060.1 2032197 2032583 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 2032197..2032583 Burkholderia cenocepacia AU 1054 4091050 YP_621709.1 CDS Bcen_1833 NC_008060.1 2032725 2033384 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bur:Bcep18194_A5775 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(2032725..2033384) Burkholderia cenocepacia AU 1054 4091051 YP_621710.1 CDS Bcen_1834 NC_008060.1 2033532 2033945 R PFAM: DoxX; KEGG: bur:Bcep18194_A5776 DoxX family membrane protein; DoxX protein complement(2033532..2033945) Burkholderia cenocepacia AU 1054 4091052 YP_621711.1 CDS Bcen_1835 NC_008060.1 2034305 2035840 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(2034305..2035840) Burkholderia cenocepacia AU 1054 4091053 YP_621712.1 CDS Bcen_1836 NC_008060.1 2035882 2036436 D PFAM: cobalbumin biosynthesis enzyme; KEGG: bur:Bcep18194_A5778 cobalbumin biosynthesis enzyme; cobalbumin biosynthesis protein 2035882..2036436 Burkholderia cenocepacia AU 1054 4091054 YP_621713.1 CDS cobD NC_008060.1 2036436 2037374 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 2036436..2037374 Burkholderia cenocepacia AU 1054 4091055 YP_621714.1 CDS Bcen_1838 NC_008060.1 2037367 2038383 D cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase 2037367..2038383 Burkholderia cenocepacia AU 1054 4091056 YP_621715.1 CDS Bcen_1839 NC_008060.1 2038380 2039297 D PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_A5781 ABC Fe3+siderophore/cobalamin transporter, periplasmic ligand binding protein; periplasmic binding protein 2038380..2039297 Burkholderia cenocepacia AU 1054 4091057 YP_621716.1 CDS Bcen_1840 NC_008060.1 2039409 2039993 R PFAM: Phosphoglycerate mutase; KEGG: bur:Bcep18194_A5782 phosphoglycerate/bisphosphoglycerate mutase; phosphoglycerate mutase complement(2039409..2039993) Burkholderia cenocepacia AU 1054 4091058 YP_621717.1 CDS cobS NC_008060.1 2039978 2040730 R catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase complement(2039978..2040730) Burkholderia cenocepacia AU 1054 4091059 YP_621718.1 CDS cobT NC_008060.1 2040744 2041826 R catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2040744..2041826) Burkholderia cenocepacia AU 1054 4091060 YP_621719.1 CDS Bcen_1843 NC_008060.1 2041861 2042679 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5785 ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit; ABC transporter complement(2041861..2042679) Burkholderia cenocepacia AU 1054 4091061 YP_621720.1 CDS Bcen_1844 NC_008060.1 2042676 2043791 R PFAM: ABC transporter permease; KEGG: bur:Bcep18194_A5786 ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit; ABC transporter permease complement(2042676..2043791) Burkholderia cenocepacia AU 1054 4091062 YP_621721.1 CDS Bcen_1845 NC_008060.1 2044237 2044587 D KEGG: bur:Bcep18194_A5787 hypothetical protein; hypothetical protein 2044237..2044587 Burkholderia cenocepacia AU 1054 4091064 YP_621722.1 CDS Bcen_1846 NC_008060.1 2044584 2044898 D PFAM: protein of unknown function DUF710; KEGG: bur:Bcep18194_A5788 protein of unknown function DUF710; hypothetical protein 2044584..2044898 Burkholderia cenocepacia AU 1054 4091065 YP_621723.1 CDS Bcen_1847 NC_008060.1 2045232 2045693 D PFAM: protein of unknown function DUF589; KEGG: bur:Bcep18194_A5789 protein of unknown function DUF589; hypothetical protein 2045232..2045693 Burkholderia cenocepacia AU 1054 4091066 YP_621724.1 CDS Bcen_1848 NC_008060.1 2045874 2046614 D PFAM: protein of unknown function DUF541; KEGG: bur:Bcep18194_A5790 protein of unknown function DUF541; hypothetical protein 2045874..2046614 Burkholderia cenocepacia AU 1054 4091067 YP_621725.1 CDS Bcen_1849 NC_008060.1 2046764 2047654 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(2046764..2047654) Burkholderia cenocepacia AU 1054 4091068 YP_621726.1 CDS Bcen_1850 NC_008060.1 2047744 2048730 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5792 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2047744..2048730) Burkholderia cenocepacia AU 1054 4091069 YP_621727.1 CDS Bcen_1851 NC_008060.1 2048795 2050468 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2048795..2050468 Burkholderia cenocepacia AU 1054 4091070 YP_621728.1 CDS Bcen_1852 NC_008060.1 2050593 2050919 D PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_A5794 cytochrome c, class I; cytochrome c, class I 2050593..2050919 Burkholderia cenocepacia AU 1054 4091071 YP_621729.1 CDS Bcen_1853 NC_008060.1 2051067 2051822 R KEGG: bur:Bcep18194_A5795 hypothetical protein; hypothetical protein complement(2051067..2051822) Burkholderia cenocepacia AU 1054 4091072 YP_621730.1 CDS Bcen_1854 NC_008060.1 2051848 2052264 R binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi complement(2051848..2052264) Burkholderia cenocepacia AU 1054 4091073 YP_621731.1 CDS Bcen_1855 NC_008060.1 2052299 2053810 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(2052299..2053810) Burkholderia cenocepacia AU 1054 4091074 YP_621732.1 CDS Bcen_1856 NC_008060.1 2053933 2055027 D PFAM: permease YjgP/YjgQ; KEGG: bur:Bcep18194_A5798 YjgP/YjgQ like transporter; permease YjgP/YjgQ 2053933..2055027 Burkholderia cenocepacia AU 1054 4091075 YP_621733.1 CDS Bcen_1857 NC_008060.1 2055031 2056179 D PFAM: permease YjgP/YjgQ; KEGG: bur:Bcep18194_A5799 YjgP/YjgQ like transporter; permease YjgP/YjgQ 2055031..2056179 Burkholderia cenocepacia AU 1054 4091076 YP_621734.1 CDS Bcen_1858 NC_008060.1 2056205 2056588 D PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: bur:Bcep18194_A5800 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 2056205..2056588 Burkholderia cenocepacia AU 1054 4091077 YP_621735.1 CDS Bcen_1859 NC_008060.1 2056673 2057422 R catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase complement(2056673..2057422) Burkholderia cenocepacia AU 1054 4091078 YP_621736.1 CDS Bcen_1860 NC_008060.1 2057483 2058799 R KEGG: bur:Bcep18194_A5802 sulfate adenylyltransferase, large subunit TIGRFAM: Sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2; sulfate adenylyltransferase complement(2057483..2058799) Burkholderia cenocepacia AU 1054 4091079 YP_621737.1 CDS Bcen_1861 NC_008060.1 2058822 2059784 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(2058822..2059784) Burkholderia cenocepacia AU 1054 4091080 YP_621738.1 CDS Bcen_1862 NC_008060.1 2059861 2060610 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(2059861..2060610) Burkholderia cenocepacia AU 1054 4091081 YP_621739.1 CDS Bcen_1863 NC_008060.1 2060607 2061146 R PFAM: Uncharacterised conserved protein UCP030820; KEGG: bur:Bcep18194_A5805 uncharacterized conserved protein UCP030820; hypothetical protein complement(2060607..2061146) Burkholderia cenocepacia AU 1054 4091082 YP_621740.1 CDS Bcen_1864 NC_008060.1 2061172 2062851 R PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like; nitrite and sulphite reductase 4Fe-4S region; KEGG: bur:Bcep18194_A5806 nitrite/sulfite reductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein complement(2061172..2062851) Burkholderia cenocepacia AU 1054 4091083 YP_621741.1 CDS Bcen_1865 NC_008060.1 2063066 2064007 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5807 transcriptional regulator, LysR family; transcriptional regulator CysB-like protein 2063066..2064007 Burkholderia cenocepacia AU 1054 4093067 YP_621742.1 CDS Bcen_1866 NC_008060.1 2064078 2065262 D KEGG: bur:Bcep18194_A5808 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; branched chain amino acid ABC transporter periplasmic ligand-binding protein 2064078..2065262 Burkholderia cenocepacia AU 1054 4093068 YP_621743.1 CDS Bcen_1867 NC_008060.1 2065801 2066703 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5810 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2065801..2066703) Burkholderia cenocepacia AU 1054 4093070 YP_621744.1 CDS Bcen_1868 NC_008060.1 2066824 2067561 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A5811 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2066824..2067561 Burkholderia cenocepacia AU 1054 4093071 YP_621745.1 CDS Bcen_1869 NC_008060.1 2067605 2068504 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility-like; KEGG: bur:Bcep18194_A5812 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2067605..2068504 Burkholderia cenocepacia AU 1054 4093072 YP_621746.1 CDS Bcen_1870 NC_008060.1 2068536 2069426 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A5813 alpha/beta hydrolase; alpha/beta hydrolase complement(2068536..2069426) Burkholderia cenocepacia AU 1054 4093073 YP_621747.1 CDS Bcen_1871 NC_008060.1 2069497 2070420 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5814 transcriptional regulator, LysR family; LysR family transcriptional regulator 2069497..2070420 Burkholderia cenocepacia AU 1054 4093074 YP_621748.1 CDS Bcen_1872 NC_008060.1 2070519 2071568 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5815 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2070519..2071568) Burkholderia cenocepacia AU 1054 4093075 YP_621749.1 CDS Bcen_1873 NC_008060.1 2071615 2072388 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A5816 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(2071615..2072388) Burkholderia cenocepacia AU 1054 4093076 YP_621750.1 CDS Bcen_1874 NC_008060.1 2072566 2073066 R KEGG: bur:Bcep18194_A5817 hypothetical protein; hypothetical protein complement(2072566..2073066) Burkholderia cenocepacia AU 1054 4093077 YP_621751.1 CDS Bcen_1875 NC_008060.1 2073132 2073506 R PFAM: copper resistance protein CopC; KEGG: bur:Bcep18194_A5818 copper resistance protein CopC; copper resistance protein CopC complement(2073132..2073506) Burkholderia cenocepacia AU 1054 4093078 YP_621752.1 CDS Bcen_1876 NC_008060.1 2073621 2074337 D TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4; pseudouridine synthase; KEGG: bur:Bcep18194_A5819 pseudouridine synthase, Rsu; pseudouridine synthase, Rsu 2073621..2074337 Burkholderia cenocepacia AU 1054 4093079 YP_621753.1 CDS Bcen_1877 NC_008060.1 2074444 2074632 D KEGG: bur:Bcep18194_A5820 hypothetical protein; hypothetical protein 2074444..2074632 Burkholderia cenocepacia AU 1054 4093080 YP_621754.1 CDS Bcen_1878 NC_008060.1 2074615 2075652 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_A5821 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2074615..2075652) Burkholderia cenocepacia AU 1054 4093081 YP_621755.1 CDS Bcen_1879 NC_008060.1 2075760 2076791 D catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 2075760..2076791 Burkholderia cenocepacia AU 1054 4093082 YP_621756.2 CDS argD NC_008060.1 2077084 2078268 D DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 2077084..2078268 Burkholderia cenocepacia AU 1054 4093083 YP_621757.1 CDS Bcen_1881 NC_008060.1 2078282 2078737 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5824 GCN5-related N-acetyltransferase; acetyltransferase 2078282..2078737 Burkholderia cenocepacia AU 1054 4093084 YP_621758.1 CDS Bcen_1882 NC_008060.1 2078763 2079434 R KEGG: bur:Bcep18194_A5825 hypothetical protein; hypothetical protein complement(2078763..2079434) Burkholderia cenocepacia AU 1054 4093085 YP_621759.1 CDS Bcen_1883 NC_008060.1 2079658 2080374 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bpm:BURPS1710b_1146 branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter complement(2079658..2080374) Burkholderia cenocepacia AU 1054 4093086 YP_621760.1 CDS Bcen_1884 NC_008060.1 2080374 2081150 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5827 ABC branched-chain amino acid family transporter, ATPase subunit; ABC transporter complement(2080374..2081150) Burkholderia cenocepacia AU 1054 4093087 YP_621761.1 CDS Bcen_1885 NC_008060.1 2081174 2082343 R PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A5828 ABC branched-chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(2081174..2082343) Burkholderia cenocepacia AU 1054 4093088 YP_621762.1 CDS Bcen_1886 NC_008060.1 2082363 2083313 R PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A5829 ABC branched-chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(2082363..2083313) Burkholderia cenocepacia AU 1054 4093089 YP_621763.1 CDS Bcen_1887 NC_008060.1 2083525 2084178 R KEGG: bur:Bcep18194_A5830 hypothetical protein; hypothetical protein complement(2083525..2084178) Burkholderia cenocepacia AU 1054 4093090 YP_621764.1 CDS ispH NC_008060.1 2084449 2085429 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2084449..2085429) Burkholderia cenocepacia AU 1054 4093091 YP_621765.1 CDS Bcen_1889 NC_008060.1 2085432 2085887 R PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: bur:Bcep18194_A5832 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type complement(2085432..2085887) Burkholderia cenocepacia AU 1054 4093092 YP_621766.1 CDS radC NC_008060.1 2086023 2086796 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 2086023..2086796 Burkholderia cenocepacia AU 1054 4093093 YP_621767.1 CDS rpmB NC_008060.1 2087034 2087267 D required for 70S ribosome assembly; 50S ribosomal protein L28 2087034..2087267 Burkholderia cenocepacia AU 1054 4093094 YP_621768.1 CDS rpmG NC_008060.1 2087285 2087452 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2087285..2087452 Burkholderia cenocepacia AU 1054 4093095 YP_621769.1 CDS Bcen_1893 NC_008060.1 2087629 2089215 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2087629..2089215 Burkholderia cenocepacia AU 1054 4093096 YP_621770.1 CDS Bcen_1894 NC_008060.1 2089313 2090194 R catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase complement(2089313..2090194) Burkholderia cenocepacia AU 1054 4093097 YP_621771.1 CDS Bcen_1895 NC_008060.1 2090191 2091327 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(2090191..2091327) Burkholderia cenocepacia AU 1054 4093098 YP_621772.1 CDS Bcen_1896 NC_008060.1 2091638 2092834 R PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_A5839 fatty acid desaturase; fatty acid desaturase complement(2091638..2092834) Burkholderia cenocepacia AU 1054 4093099 YP_621773.1 CDS Bcen_1897 NC_008060.1 2093050 2094435 R PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_A5840 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel complement(2093050..2094435) Burkholderia cenocepacia AU 1054 4093100 YP_621774.1 CDS Bcen_1898 NC_008060.1 2094454 2095719 R PFAM: Fmu (Sun); KEGG: bur:Bcep18194_A5841 methylases; hypothetical protein complement(2094454..2095719) Burkholderia cenocepacia AU 1054 4093101 YP_621775.1 CDS purN NC_008060.1 2095716 2096378 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(2095716..2096378) Burkholderia cenocepacia AU 1054 4093102 YP_621776.1 CDS Bcen_1900 NC_008060.1 2096501 2097493 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 2096501..2097493 Burkholderia cenocepacia AU 1054 4093103 YP_621777.1 CDS ileS NC_008060.1 2097597 2100434 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2097597..2100434 Burkholderia cenocepacia AU 1054 4093104 YP_621778.1 CDS lspA NC_008060.1 2100437 2100937 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2100437..2100937 Burkholderia cenocepacia AU 1054 4091644 YP_621779.1 CDS Bcen_1903 NC_008060.1 2100985 2102217 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2100985..2102217 Burkholderia cenocepacia AU 1054 4091645 YP_621780.1 CDS dut NC_008060.1 2102271 2102717 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2102271..2102717 Burkholderia cenocepacia AU 1054 4091646 YP_621781.1 CDS Bcen_1905 NC_008060.1 2102776 2103546 R PFAM: protein of unknown function DUF347; KEGG: bur:Bcep18194_A5848 protein of unknown function DUF347; hypothetical protein complement(2102776..2103546) Burkholderia cenocepacia AU 1054 4091647 YP_621782.1 CDS Bcen_1906 NC_008060.1 2103683 2105089 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_A5849 amino acid tranporter; amino acid permease complement(2103683..2105089) Burkholderia cenocepacia AU 1054 4091648 YP_621783.1 CDS Bcen_1907 NC_008060.1 2105166 2107466 R KEGG: bur:Bcep18194_A5850 AAA ATPase, Clp TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase AAA; Clp, N terminal; ATPase associated with various cellular activities, AAA_5; ATPase AAA; SMART: ATPase; ATP-dependent Clp protease ATP-binding subunit clpA complement(2105166..2107466) Burkholderia cenocepacia AU 1054 4091649 YP_621784.1 CDS clpS NC_008060.1 2107463 2107777 R involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS complement(2107463..2107777) Burkholderia cenocepacia AU 1054 4091650 YP_621785.1 CDS Bcen_1909 NC_008060.1 2108322 2108525 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: bur:Bcep18194_A5852 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 2108322..2108525 Burkholderia cenocepacia AU 1054 4091651 YP_621786.1 CDS Bcen_1910 NC_008060.1 2108707 2110314 R PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: bur:Bcep18194_A5853 multicopper oxidase, type 3; multicopper oxidase, type 3 complement(2108707..2110314) Burkholderia cenocepacia AU 1054 4091652 YP_621787.1 CDS Bcen_1911 NC_008060.1 2110692 2111213 R hypothetical protein complement(2110692..2111213) Burkholderia cenocepacia AU 1054 4091653 YP_621788.1 CDS Bcen_1912 NC_008060.1 2111240 2113468 R KEGG: bur:Bcep18194_A5855 isocitrate dehydrogenase (NADP+) TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase complement(2111240..2113468) Burkholderia cenocepacia AU 1054 4091654 YP_621789.1 CDS Bcen_1913 NC_008060.1 2113749 2115005 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(2113749..2115005) Burkholderia cenocepacia AU 1054 4091655 YP_621790.1 CDS Bcen_1914 NC_008060.1 2115284 2115862 D TIGRFAM: Pseudouridine synthase, Rsu; PFAM: pseudouridine synthase; KEGG: bur:Bcep18194_A5857 pseudouridine synthase, Rsu; pseudouridine synthase, Rsu 2115284..2115862 Burkholderia cenocepacia AU 1054 4091656 YP_621791.1 CDS Bcen_1915 NC_008060.1 2116520 2117020 D PFAM: protein of unknown function DUF192; KEGG: bur:Bcep18194_A5859 protein of unknown function DUF192; hypothetical protein 2116520..2117020 Burkholderia cenocepacia AU 1054 4091657 YP_621792.1 CDS Bcen_1916 NC_008060.1 2117129 2119372 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2117129..2119372 Burkholderia cenocepacia AU 1054 4091658 YP_621793.1 CDS Bcen_1917 NC_008060.1 2119506 2120549 D TIGRFAM: high-affinity nickel-transporter; KEGG: bur:Bcep18194_A5861 high-affinity nickel-transporter; high-affinity nickel-transporter 2119506..2120549 Burkholderia cenocepacia AU 1054 4091659 YP_621794.1 CDS Bcen_1918 NC_008060.1 2120841 2122394 D KEGG: bur:Bcep18194_A5862 hypothetical protein; hypothetical protein 2120841..2122394 Burkholderia cenocepacia AU 1054 4091660 YP_621795.1 CDS Bcen_1919 NC_008060.1 2122422 2123267 R PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_A5863 aldo/keto reductase; aldo/keto reductase complement(2122422..2123267) Burkholderia cenocepacia AU 1054 4091661 YP_621796.1 CDS Bcen_1920 NC_008060.1 2123435 2124181 D PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated; KEGG: bur:Bcep18194_A5864 transcriptional regulator, GntR family; GntR family transcriptional regulator 2123435..2124181 Burkholderia cenocepacia AU 1054 4091662 YP_621797.1 CDS Bcen_1921 NC_008060.1 2124151 2125593 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A5865 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2124151..2125593) Burkholderia cenocepacia AU 1054 4091663 YP_621798.1 CDS Bcen_1922 NC_008060.1 2125734 2126966 D PFAM: regulatory protein, MerR; Citrate synthase; KEGG: bps:BPSL0890 citrate synthase; citrate synthase 2125734..2126966 Burkholderia cenocepacia AU 1054 4091664 YP_621799.1 CDS Bcen_1923 NC_008060.1 2126939 2127262 R KEGG: bur:Bcep18194_A5866 hypothetical protein; hypothetical protein complement(2126939..2127262) Burkholderia cenocepacia AU 1054 4091665 YP_621800.1 CDS Bcen_1924 NC_008060.1 2127289 2128938 D TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5867 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 2127289..2128938 Burkholderia cenocepacia AU 1054 4091666 YP_621801.1 CDS Bcen_1925 NC_008060.1 2129106 2130380 D PFAM: EAL; KEGG: bur:Bcep18194_A5868 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 2129106..2130380 Burkholderia cenocepacia AU 1054 4091667 YP_621802.1 CDS Bcen_1926 NC_008060.1 2130400 2131005 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A5869 hypothetical protein; methyltransferase type 11 complement(2130400..2131005) Burkholderia cenocepacia AU 1054 4091668 YP_621803.1 CDS Bcen_1927 NC_008060.1 2131048 2132160 R catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase complement(2131048..2132160) Burkholderia cenocepacia AU 1054 4091669 YP_621804.1 CDS Bcen_1928 NC_008060.1 2132153 2132677 R PFAM: protein of unknown function DUF962; KEGG: bur:Bcep18194_A5871 protein of unknown function DUF962; hypothetical protein complement(2132153..2132677) Burkholderia cenocepacia AU 1054 4091670 YP_621805.1 CDS Bcen_1929 NC_008060.1 2132759 2133466 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: bur:Bcep18194_A5872 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 2132759..2133466 Burkholderia cenocepacia AU 1054 4091671 YP_621806.1 CDS Bcen_1930 NC_008060.1 2133793 2134785 D PFAM: Chromate transporter; KEGG: bur:Bcep18194_A5873 chromate transporter; chromate transporter 2133793..2134785 Burkholderia cenocepacia AU 1054 4091672 YP_621807.1 CDS Bcen_1931 NC_008060.1 2134887 2135465 R PFAM: manganese and iron superoxide dismutase; KEGG: bur:Bcep18194_A5874 superoxide dismutase; superoxide dismutase complement(2134887..2135465) Burkholderia cenocepacia AU 1054 4091673 YP_621808.1 CDS xseA NC_008060.1 2135698 2137080 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(2135698..2137080) Burkholderia cenocepacia AU 1054 4091674 YP_621809.1 CDS Bcen_1933 NC_008060.1 2137530 2138558 D Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2137530..2138558 Burkholderia cenocepacia AU 1054 4091675 YP_621810.1 CDS Bcen_1934 NC_008060.1 2138539 2138733 D PFAM: protein of unknown function DUF343; KEGG: bur:Bcep18194_A5877 protein of unknown function DUF343; hypothetical protein 2138539..2138733 Burkholderia cenocepacia AU 1054 4091676 YP_621811.1 CDS Bcen_1935 NC_008060.1 2138859 2139650 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2138859..2139650 Burkholderia cenocepacia AU 1054 4091677 YP_621812.1 CDS adk NC_008060.1 2139859 2140521 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2139859..2140521 Burkholderia cenocepacia AU 1054 4091678 YP_621813.1 CDS Bcen_1937 NC_008060.1 2140669 2141511 R KEGG: bur:Bcep18194_A5881 hypothetical protein; hypothetical protein complement(2140669..2141511) Burkholderia cenocepacia AU 1054 4091679 YP_621814.1 CDS Bcen_1938 NC_008060.1 2141520 2143160 R TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN-like; KEGG: bur:Bcep18194_A5882 virulence factor MviN-like; integral membrane protein MviN complement(2141520..2143160) Burkholderia cenocepacia AU 1054 4091680 YP_621815.1 CDS rpsT NC_008060.1 2143376 2143648 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 2143376..2143648 Burkholderia cenocepacia AU 1054 4091681 YP_621816.1 CDS Bcen_1940 NC_008060.1 2143805 2144125 R KEGG: bpm:BURPS1710b_1074 hypothetical protein; hypothetical protein complement(2143805..2144125) Burkholderia cenocepacia AU 1054 4091682 YP_621817.1 CDS Bcen_1941 NC_008060.1 2144152 2144517 D TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: bur:Bcep18194_A5885 ornithine carbamoyltransferase; ornithine carbamoyltransferase 2144152..2144517 Burkholderia cenocepacia AU 1054 4092474 YP_621818.1 CDS Bcen_1942 NC_008060.1 2144537 2145466 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 2144537..2145466 Burkholderia cenocepacia AU 1054 4092475 YP_621819.1 CDS murB NC_008060.1 2145554 2146603 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(2145554..2146603) Burkholderia cenocepacia AU 1054 4092476 YP_621820.1 CDS Bcen_1944 NC_008060.1 2146740 2147225 D nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 2146740..2147225 Burkholderia cenocepacia AU 1054 4092477 YP_621821.1 CDS Bcen_1945 NC_008060.1 2147293 2147934 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY complement(2147293..2147934) Burkholderia cenocepacia AU 1054 4092478 YP_621822.1 CDS Bcen_1946 NC_008060.1 2148042 2148677 D KEGG: bpm:BURPS1710b_1068 AMP-binding enzyme domain protein; AMP-binding domain-containing protein 2148042..2148677 Burkholderia cenocepacia AU 1054 4092479 YP_621823.1 CDS Bcen_1947 NC_008060.1 2148778 2150340 D PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A5890 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2148778..2150340 Burkholderia cenocepacia AU 1054 4092480 YP_621824.1 CDS xerD NC_008060.1 2150409 2151365 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(2150409..2151365) Burkholderia cenocepacia AU 1054 4092481 YP_621825.1 CDS Bcen_1949 NC_008060.1 2151365 2151832 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: bur:Bcep18194_A5892 methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(2151365..2151832) Burkholderia cenocepacia AU 1054 4092482 YP_621826.1 CDS Bcen_1950 NC_008060.1 2151900 2153135 R TIGRFAM: 4Fe-4S cluster binding; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; Domain of unknown function DUF1730; KEGG: bur:Bcep18194_A5893 4Fe-4S cluster binding protein; 4Fe-4S binding protein complement(2151900..2153135) Burkholderia cenocepacia AU 1054 4092483 YP_621827.1 CDS Bcen_1951 NC_008060.1 2153189 2153704 D PFAM: protein of unknown function UPF0079; KEGG: bur:Bcep18194_A5894 protein of unknown function UPF0079; hypothetical protein 2153189..2153704 Burkholderia cenocepacia AU 1054 4092484 YP_621828.1 CDS Bcen_1952 NC_008060.1 2153701 2155212 D PFAM: cell wall hydrolase/autolysin; KEGG: bur:Bcep18194_A5895 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 2153701..2155212 Burkholderia cenocepacia AU 1054 4092485 YP_621829.1 CDS Bcen_1953 NC_008060.1 2155257 2156138 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_A5896 protein of unknown function DUF6, transmembrane; hypothetical protein complement(2155257..2156138) Burkholderia cenocepacia AU 1054 4092486 YP_621830.1 CDS Bcen_1954 NC_008060.1 2156393 2157274 D PFAM: Pirin-like; KEGG: bur:Bcep18194_A5897 pirin-like protein; Pirin-like protein 2156393..2157274 Burkholderia cenocepacia AU 1054 4092487 YP_621831.1 CDS Bcen_1955 NC_008060.1 2157327 2158175 D TIGRFAM: thioredoxin; PFAM: Tetratricopeptide TPR_2; Thioredoxin domain; KEGG: bur:Bcep18194_A5898 thioredoxin; thioredoxin 2157327..2158175 Burkholderia cenocepacia AU 1054 4092488 YP_621832.1 CDS Bcen_1956 NC_008060.1 2158309 2159166 R PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: bur:Bcep18194_A5899 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding fold complement(2158309..2159166) Burkholderia cenocepacia AU 1054 4092489 YP_621833.1 CDS Bcen_1957 NC_008060.1 2159295 2159939 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 2159295..2159939 Burkholderia cenocepacia AU 1054 4092490 YP_621834.1 CDS Bcen_1958 NC_008060.1 2160061 2161281 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A5901 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 2160061..2161281 Burkholderia cenocepacia AU 1054 4092491 YP_621835.1 CDS Bcen_1959 NC_008060.1 2161305 2162606 D PFAM: protein of unknown function DUF72; KEGG: bur:Bcep18194_A5902 protein of unknown function DUF72; hypothetical protein 2161305..2162606 Burkholderia cenocepacia AU 1054 4092492 YP_621836.1 CDS Bcen_1960 NC_008060.1 2162632 2163192 R KEGG: bur:Bcep18194_A5903 protein-methionine-S-oxide reductase TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase complement(2162632..2163192) Burkholderia cenocepacia AU 1054 4092493 YP_621837.1 CDS Bcen_1961 NC_008060.1 2163306 2163710 R hypothetical protein complement(2163306..2163710) Burkholderia cenocepacia AU 1054 4092494 YP_621838.1 CDS Bcen_1962 NC_008060.1 2163758 2165164 D PFAM: selenium-binding protein; KEGG: bur:Bcep18194_A5904 56kDa selenium binding protein; selenium-binding protein 2163758..2165164 Burkholderia cenocepacia AU 1054 4092495 YP_621839.1 CDS Bcen_1963 NC_008060.1 2165161 2165826 D KEGG: bur:Bcep18194_A5905 hypothetical protein; hypothetical protein 2165161..2165826 Burkholderia cenocepacia AU 1054 4092496 YP_621840.1 CDS Bcen_1964 NC_008060.1 2166107 2166616 D PFAM: flavin reductase-like, FMN-binding; KEGG: bur:Bcep18194_A5906 flavin reductase-like, FMN-binding; flavin reductase-like, FMN-binding 2166107..2166616 Burkholderia cenocepacia AU 1054 4092497 YP_621841.1 CDS Bcen_1965 NC_008060.1 2166603 2167103 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_A5907 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2166603..2167103) Burkholderia cenocepacia AU 1054 4092498 YP_621842.1 CDS Bcen_1966 NC_008060.1 2167233 2167874 D PFAM: cyclase; KEGG: bur:Bcep18194_A5908 cyclase; cyclase 2167233..2167874 Burkholderia cenocepacia AU 1054 4092499 YP_621843.1 CDS Bcen_1967 NC_008060.1 2167899 2169155 D TIGRFAM: kynureninase; PFAM: aminotransferase, class V; KEGG: bur:Bcep18194_A5909 kynureninase; kynureninase 2167899..2169155 Burkholderia cenocepacia AU 1054 4092500 YP_621844.1 CDS Bcen_1968 NC_008060.1 2169257 2170192 D PFAM: tryptophan 2,3-dioxygenase; KEGG: bur:Bcep18194_A5910 tryptophan 2,3-dioxygenase; tryptophan 2,3-dioxygenase 2169257..2170192 Burkholderia cenocepacia AU 1054 4092501 YP_621845.1 CDS Bcen_1969 NC_008060.1 2170222 2171625 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5911 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2170222..2171625) Burkholderia cenocepacia AU 1054 4092502 YP_621846.1 CDS Bcen_1970 NC_008060.1 2171886 2172830 R KEGG: bur:Bcep18194_A5912 2-dehydropantoate 2-reductase TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE-like; 2-dehydropantoate 2-reductase complement(2171886..2172830) Burkholderia cenocepacia AU 1054 4092503 YP_621847.1 CDS Bcen_1971 NC_008060.1 2172844 2174295 R PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_A5913 aldehyde dehydrogenase; aldehyde dehydrogenase complement(2172844..2174295) Burkholderia cenocepacia AU 1054 4092504 YP_621848.1 CDS Bcen_1974 NC_008060.1 2176030 2176941 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5915 transcriptional regulator, LysR family; LysR family transcriptional regulator 2176030..2176941 Burkholderia cenocepacia AU 1054 4092506 YP_621849.1 CDS Bcen_1975 NC_008060.1 2177115 2178509 D PFAM: Mannitol dehydrogenase-like; Mannitol dehydrogenase rossman-like; KEGG: bur:Bcep18194_A5916 mannitol dehydrogenase; mannitol dehydrogenase-like protein 2177115..2178509 Burkholderia cenocepacia AU 1054 4092507 YP_621850.1 CDS Bcen_1976 NC_008060.1 2178614 2180095 D TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: bur:Bcep18194_A5917 xylulokinase; xylulokinase 2178614..2180095 Burkholderia cenocepacia AU 1054 4092508 YP_621851.1 CDS Bcen_1977 NC_008060.1 2180159 2181172 D PFAM: sugar-binding region; KEGG: bur:Bcep18194_A5918 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 2180159..2181172 Burkholderia cenocepacia AU 1054 4092509 YP_621852.1 CDS Bcen_1978 NC_008060.1 2181195 2182418 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5919 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2181195..2182418) Burkholderia cenocepacia AU 1054 4092510 YP_621853.1 CDS Bcen_1979 NC_008060.1 2182415 2183611 R PFAM: beta-lactamase; KEGG: bur:Bcep18194_A5920 beta-lactamase; beta-lactamase complement(2182415..2183611) Burkholderia cenocepacia AU 1054 4092511 YP_621854.1 CDS Bcen_1980 NC_008060.1 2183725 2184609 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5921 transcriptional regulator, LysR family; LysR family transcriptional regulator 2183725..2184609 Burkholderia cenocepacia AU 1054 4092512 YP_621855.1 CDS Bcen_1981 NC_008060.1 2184624 2185730 R PFAM: ABC transporter related; TOBE; Transport-associated OB; SMART: ATPase; KEGG: bur:Bcep18194_A5922 ABC sugar transporter, fused ATPase subunits; ABC transporter complement(2184624..2185730) Burkholderia cenocepacia AU 1054 4091143 YP_621856.1 CDS Bcen_1982 NC_008060.1 2185793 2186506 R TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_A5923 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase complement(2185793..2186506) Burkholderia cenocepacia AU 1054 4091144 YP_621857.1 CDS Bcen_1983 NC_008060.1 2186503 2187354 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5924 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2186503..2187354) Burkholderia cenocepacia AU 1054 4091145 YP_621858.1 CDS Bcen_1984 NC_008060.1 2187351 2188304 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5925 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2187351..2188304) Burkholderia cenocepacia AU 1054 4091146 YP_621859.1 CDS Bcen_1985 NC_008060.1 2188419 2189744 R PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_A5926 ABC sugar transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(2188419..2189744) Burkholderia cenocepacia AU 1054 4091147 YP_621860.1 CDS Bcen_1986 NC_008060.1 2189817 2191169 R PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: bur:Bcep18194_A5927 tagatose-6-phosphate kinase; tagatose-6-phosphate kinase complement(2189817..2191169) Burkholderia cenocepacia AU 1054 4091148 YP_621861.1 CDS Bcen_1987 NC_008060.1 2191157 2192113 R PFAM: PfkB; KEGG: bur:Bcep18194_A5928 sugar kinase, ribokinase family; PfkB protein complement(2191157..2192113) Burkholderia cenocepacia AU 1054 4091149 YP_621862.1 CDS Bcen_1988 NC_008060.1 2192192 2193022 R Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase complement(2192192..2193022) Burkholderia cenocepacia AU 1054 4091150 YP_621863.1 CDS Bcen_1989 NC_008060.1 2193306 2193767 D PFAM: ferric-uptake regulator; KEGG: bur:Bcep18194_A5930 ferric uptake regulator, FUR family; ferric uptake regulator family protein 2193306..2193767 Burkholderia cenocepacia AU 1054 4091151 YP_621864.1 CDS Bcen_1990 NC_008060.1 2193814 2194725 D PFAM: periplasmic solute binding protein; KEGG: bur:Bcep18194_A5931 ABC heavy metal transporter, periplasmic ligand binding protein; periplasmic solute binding protein 2193814..2194725 Burkholderia cenocepacia AU 1054 4091152 YP_621865.1 CDS Bcen_1991 NC_008060.1 2194743 2195633 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5932 ABC heavy metal transporter, ATPase subunit; ABC transporter 2194743..2195633 Burkholderia cenocepacia AU 1054 4091153 YP_621866.1 CDS Bcen_1992 NC_008060.1 2195626 2196408 D PFAM: ABC-3; KEGG: bur:Bcep18194_A5933 ABC heavy metal transporter, inner membrane subunit; hypothetical protein 2195626..2196408 Burkholderia cenocepacia AU 1054 4091154 YP_621867.1 CDS Bcen_1993 NC_008060.1 2196539 2197387 R PFAM: esterase; KEGG: bur:Bcep18194_A5934 carboxylesterase; carboxylesterase complement(2196539..2197387) Burkholderia cenocepacia AU 1054 4091155 YP_621868.1 CDS Bcen_1994 NC_008060.1 2197403 2198509 R PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_A5935 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase complement(2197403..2198509) Burkholderia cenocepacia AU 1054 4091156 YP_621869.1 CDS Bcen_1995 NC_008060.1 2198723 2200174 R PFAM: carbohydrate kinase, FGGY; KEGG: bur:Bcep18194_A5936 carbohydrate kinase, FGGY; carbohydrate kinase complement(2198723..2200174) Burkholderia cenocepacia AU 1054 4091157 YP_621870.1 CDS Bcen_1996 NC_008060.1 2200614 2201990 D TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bur:Bcep18194_A5937 xanthine/uracil transporter; uracil-xanthine permease 2200614..2201990 Burkholderia cenocepacia AU 1054 4091158 YP_621871.1 CDS Bcen_1997 NC_008060.1 2202185 2203708 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A5938 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT complement(2202185..2203708) Burkholderia cenocepacia AU 1054 4091159 YP_621872.1 CDS Bcen_1998 NC_008060.1 2203708 2206908 R TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_A5939 hydrophobe/amphiphile efflux-1 pump, HAE1; hydrophobe/amphiphile efflux-1 HAE1 complement(2203708..2206908) Burkholderia cenocepacia AU 1054 4091160 YP_621873.1 CDS Bcen_1999 NC_008060.1 2206924 2208198 R PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_A5940 secretion protein HlyD family; secretion protein HlyD complement(2206924..2208198) Burkholderia cenocepacia AU 1054 4091161 YP_621874.1 CDS Bcen_2000 NC_008060.1 2208536 2209240 D PFAM: regulatory protein, TetR; Tetracycline transcriptional repressor MAATS-type-like; KEGG: bur:Bcep18194_A5941 transcriptional regulator, TetR family; TetR family transcriptional regulator 2208536..2209240 Burkholderia cenocepacia AU 1054 4091162 YP_621875.1 CDS Bcen_2001 NC_008060.1 2209284 2209949 R PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_A5942 isochorismatase hydrolase; isochorismatase hydrolase complement(2209284..2209949) Burkholderia cenocepacia AU 1054 4091163 YP_621876.1 CDS Bcen_2002 NC_008060.1 2210102 2211127 D PFAM: helix-turn-helix, AraC type; ThiJ/PfpI; KEGG: bur:Bcep18194_A5943 transcriptional regulator, AraC family; AraC family transcriptional regulator 2210102..2211127 Burkholderia cenocepacia AU 1054 4091164 YP_621877.1 CDS Bcen_2003 NC_008060.1 2211184 2211891 R PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bur:Bcep18194_A5944 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G complement(2211184..2211891) Burkholderia cenocepacia AU 1054 4091165 YP_621878.1 CDS Bcen_2004 NC_008060.1 2211920 2212279 R PFAM: protein of unknown function DUF427; KEGG: bur:Bcep18194_A5945 protein of unknown function DUF427; hypothetical protein complement(2211920..2212279) Burkholderia cenocepacia AU 1054 4091166 YP_621879.1 CDS Bcen_2005 NC_008060.1 2212409 2212846 R KEGG: bur:Bcep18194_A5946 hypothetical protein; hypothetical protein complement(2212409..2212846) Burkholderia cenocepacia AU 1054 4091167 YP_621880.1 CDS Bcen_2006 NC_008060.1 2212951 2214432 R TIGRFAM: Peptidase S1C, Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: bur:Bcep18194_A5947 peptidase S1C, Do; peptidase S1C, Do complement(2212951..2214432) Burkholderia cenocepacia AU 1054 4091168 YP_621881.1 CDS Bcen_2007 NC_008060.1 2214546 2215892 R PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; KEGG: bur:Bcep18194_A5948 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase complement(2214546..2215892) Burkholderia cenocepacia AU 1054 4091169 YP_621882.1 CDS Bcen_2008 NC_008060.1 2216742 2218274 D KEGG: bpm:BURPS1710b_1009 family S13 unassigned peptidase TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2216742..2218274 Burkholderia cenocepacia AU 1054 4091170 YP_621883.1 CDS Bcen_2009 NC_008060.1 2218608 2219522 D KEGG: bur:Bcep18194_A5951 sterol desaturase-like; sterol desaturase-like 2218608..2219522 Burkholderia cenocepacia AU 1054 4091171 YP_621884.1 CDS Bcen_2010 NC_008060.1 2219618 2220757 D KEGG: bur:Bcep18194_A5952 phospholipase/lecithinase/hemolysin-like; phospholipase/lecithinase/hemolysin-like 2219618..2220757 Burkholderia cenocepacia AU 1054 4091172 YP_621885.1 CDS Bcen_2011 NC_008060.1 2220856 2221884 R TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: SUA5; SUA5/yciO/yrdC-like; KEGG: bur:Bcep18194_A5953 SUA5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC complement(2220856..2221884) Burkholderia cenocepacia AU 1054 4091173 YP_621886.1 CDS Bcen_2012 NC_008060.1 2221896 2223092 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(2221896..2223092) Burkholderia cenocepacia AU 1054 4091174 YP_621887.1 CDS Bcen_2013 NC_008060.1 2223183 2223704 R KEGG: bur:Bcep18194_A5955 phosphoribosylaminoimidazole carboxylase TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(2223183..2223704) Burkholderia cenocepacia AU 1054 4091175 YP_621888.1 CDS Bcen_2014 NC_008060.1 2223721 2224611 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(2223721..2224611) Burkholderia cenocepacia AU 1054 4091176 YP_621889.1 CDS Bcen_2015 NC_008060.1 2224846 2225910 R class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase complement(2224846..2225910) Burkholderia cenocepacia AU 1054 4091177 YP_621890.1 CDS Bcen_2016 NC_008060.1 2226226 2227662 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(2226226..2227662) Burkholderia cenocepacia AU 1054 4091178 YP_621891.1 CDS pgk NC_008060.1 2227947 2229359 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(2227947..2229359) Burkholderia cenocepacia AU 1054 4091179 YP_621892.1 CDS Bcen_2018 NC_008060.1 2229424 2229747 R PFAM: branched-chain amino acid transport; KEGG: bur:Bcep18194_A5960 protein of unknown function DUF931; branched-chain amino acid transport complement(2229424..2229747) Burkholderia cenocepacia AU 1054 4091180 YP_621893.1 CDS Bcen_2019 NC_008060.1 2229744 2230562 R PFAM: AzlC-like; KEGG: bur:Bcep18194_A5961 AzlC-like efflux pump; AzlC-like protein complement(2229744..2230562) Burkholderia cenocepacia AU 1054 4091181 YP_621894.1 CDS Bcen_2020 NC_008060.1 2230705 2231628 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2230705..2231628 Burkholderia cenocepacia AU 1054 4091259 YP_621895.1 CDS Bcen_2021 NC_008060.1 2231678 2231872 D KEGG: bur:Bcep18194_A5963 hypothetical protein; hypothetical protein 2231678..2231872 Burkholderia cenocepacia AU 1054 4091260 YP_621896.1 CDS Bcen_2022 NC_008060.1 2232013 2233050 D TIGRFAM: Lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase, family 9; KEGG: bur:Bcep18194_A5964 lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase II 2232013..2233050 Burkholderia cenocepacia AU 1054 4091261 YP_621897.1 CDS Bcen_2023 NC_008060.1 2233166 2233612 D KEGG: bur:Bcep18194_A5965 hypothetical protein; hypothetical protein 2233166..2233612 Burkholderia cenocepacia AU 1054 4091262 YP_621898.1 CDS Bcen_2024 NC_008060.1 2233646 2234683 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A5966 alpha/beta hydrolase; alpha/beta hydrolase 2233646..2234683 Burkholderia cenocepacia AU 1054 4091263 YP_621899.1 CDS Bcen_2025 NC_008060.1 2234676 2235263 D KEGG: bur:Bcep18194_A5967 hypothetical protein; hypothetical protein 2234676..2235263 Burkholderia cenocepacia AU 1054 4091264 YP_621900.1 CDS Bcen_2026 NC_008060.1 2235303 2237069 R PFAM: peptidase M48, Ste24p; KEGG: bur:Bcep18194_A5968 peptidase M48, Ste24p; peptidase M48, Ste24p complement(2235303..2237069) Burkholderia cenocepacia AU 1054 4091265 YP_621901.1 CDS moaC NC_008060.1 2237267 2237755 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 2237267..2237755 Burkholderia cenocepacia AU 1054 4091266 YP_621902.1 CDS Bcen_2028 NC_008060.1 2237870 2240557 D PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_A3549 rhs element Vgr protein; Rhs element Vgr protein 2237870..2240557 Burkholderia cenocepacia AU 1054 4091267 YP_621903.1 CDS Bcen_2029 NC_008060.1 2240550 2241494 D hypothetical protein 2240550..2241494 Burkholderia cenocepacia AU 1054 4091268 YP_621904.1 CDS Bcen_2030 NC_008060.1 2241574 2242740 D PFAM: glycosyl hydrolase, BNR repeat; KEGG: sth:STH787 BNR domain protein; glycosyl hydrolase 2241574..2242740 Burkholderia cenocepacia AU 1054 4091269 YP_621905.1 CDS Bcen_2031 NC_008060.1 2242930 2244279 D PFAM: glycosyl hydrolase, BNR repeat; glycosyl hydrolase 2242930..2244279 Burkholderia cenocepacia AU 1054 4091270 YP_621906.1 CDS Bcen_2032 NC_008060.1 2244272 2245471 D KEGG: bur:Bcep18194_A5970 hypothetical protein; hypothetical protein 2244272..2245471 Burkholderia cenocepacia AU 1054 4091271 YP_621907.1 CDS Bcen_2033 NC_008060.1 2245575 2246024 R TIGRFAM: TonB-like; KEGG: bur:Bcep18194_A5971 TonB-like protein; TonB-like protein complement(2245575..2246024) Burkholderia cenocepacia AU 1054 4091272 YP_621908.1 CDS Bcen_2034 NC_008060.1 2246384 2248162 R PFAM: O-antigen polymerase; KEGG: bur:Bcep18194_A5972 O-antigen polymerase; O-antigen polymerase complement(2246384..2248162) Burkholderia cenocepacia AU 1054 4091273 YP_621909.1 CDS Bcen_2035 NC_008060.1 2248318 2248914 R PFAM: methylation; KEGG: bur:Bcep18194_A5973 general secretion pathway protein H; hypothetical protein complement(2248318..2248914) Burkholderia cenocepacia AU 1054 4091274 YP_621910.1 CDS Bcen_2036 NC_008060.1 2249011 2249715 R PFAM: Integral membrane protein TerC; KEGG: bur:Bcep18194_A5974 integral membrane protein TerC; integral membrane protein TerC complement(2249011..2249715) Burkholderia cenocepacia AU 1054 4091275 YP_621911.1 CDS Bcen_2037 NC_008060.1 2249873 2250754 R Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha complement(2249873..2250754) Burkholderia cenocepacia AU 1054 4091276 YP_621912.1 CDS sucC NC_008060.1 2250824 2251990 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(2250824..2251990) Burkholderia cenocepacia AU 1054 4091277 YP_621913.1 CDS Bcen_2039 NC_008060.1 2252059 2252667 R KEGG: bur:Bcep18194_A5977 hypothetical protein; hypothetical protein complement(2252059..2252667) Burkholderia cenocepacia AU 1054 4091278 YP_621914.1 CDS recX NC_008060.1 2252814 2253707 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(2252814..2253707) Burkholderia cenocepacia AU 1054 4091279 YP_621915.1 CDS recA NC_008060.1 2253707 2254777 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2253707..2254777) Burkholderia cenocepacia AU 1054 4091280 YP_621916.1 CDS Bcen_2042 NC_008060.1 2254844 2255692 D PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A5980 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2254844..2255692 Burkholderia cenocepacia AU 1054 4091281 YP_621917.1 CDS Bcen_2043 NC_008060.1 2255710 2257263 D PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; Two-component sensor kinase-like; KEGG: bur:Bcep18194_A5981 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase 2255710..2257263 Burkholderia cenocepacia AU 1054 4091282 YP_621918.1 CDS Bcen_2044 NC_008060.1 2257491 2259149 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5982 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 2257491..2259149 Burkholderia cenocepacia AU 1054 4091283 YP_621919.1 CDS Bcen_2045 NC_008060.1 2259496 2260470 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5984 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2259496..2260470) Burkholderia cenocepacia AU 1054 4091285 YP_621920.1 CDS Bcen_2046 NC_008060.1 2260647 2261621 R PFAM: helix-turn-helix, AraC type; ThiJ/PfpI; KEGG: bur:Bcep18194_A5985 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2260647..2261621) Burkholderia cenocepacia AU 1054 4091286 YP_621921.1 CDS Bcen_2047 NC_008060.1 2261736 2262419 D PFAM: ThiJ/PfpI; KEGG: bur:Bcep18194_A5986 ThiJ/PfpI family protein; ThiJ/PfpI 2261736..2262419 Burkholderia cenocepacia AU 1054 4091287 YP_621922.1 CDS Bcen_2048 NC_008060.1 2262493 2262804 D PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_A5987 cupin domain protein; cupin 2262493..2262804 Burkholderia cenocepacia AU 1054 4091288 YP_621923.1 CDS Bcen_2049 NC_008060.1 2262863 2263147 R KEGG: bur:Bcep18194_A5988 hypothetical protein; hypothetical protein complement(2262863..2263147) Burkholderia cenocepacia AU 1054 4091289 YP_621924.1 CDS Bcen_2050 NC_008060.1 2263732 2264619 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bte:BTH_I0124 transcriptional regulator, LysR family; LysR family transcriptional regulator 2263732..2264619 Burkholderia cenocepacia AU 1054 4091290 YP_621925.1 CDS Bcen_2051 NC_008060.1 2264877 2267984 D PFAM: glycosyl transferase, family 51; KEGG: bur:Bcep18194_A5990 glycosyl transferase, family 51; glycosyl transferase family protein 2264877..2267984 Burkholderia cenocepacia AU 1054 4091291 YP_621926.1 CDS Bcen_2052 NC_008060.1 2268027 2268374 R PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: bur:Bcep18194_A5991 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein complement(2268027..2268374) Burkholderia cenocepacia AU 1054 4091292 YP_621927.1 CDS Bcen_2053 NC_008060.1 2268522 2268767 D PFAM: protein of unknown function DUF1272; KEGG: bur:Bcep18194_A5992 protein of unknown function DUF1272; hypothetical protein 2268522..2268767 Burkholderia cenocepacia AU 1054 4091293 YP_621928.1 CDS Bcen_2054 NC_008060.1 2268807 2269385 R PFAM: GntR-like; KEGG: bur:Bcep18194_A5993 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2268807..2269385) Burkholderia cenocepacia AU 1054 4091294 YP_621929.1 CDS Bcen_2055 NC_008060.1 2269637 2270785 D PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: bur:Bcep18194_A5994 mandelate racemase/muconate lactonizing enzyme; galactonate dehydratase 2269637..2270785 Burkholderia cenocepacia AU 1054 4091295 YP_621930.1 CDS Bcen_2056 NC_008060.1 2270923 2271855 R PFAM: copper resistance D; KEGG: bur:Bcep18194_A5995 copper resistance D; copper resistance D complement(2270923..2271855) Burkholderia cenocepacia AU 1054 4091296 YP_621931.1 CDS Bcen_2057 NC_008060.1 2272246 2273010 D KEGG: bur:Bcep18194_A5996 cytochrome c, class I; cytochrome c, class I 2272246..2273010 Burkholderia cenocepacia AU 1054 4091221 YP_621932.1 CDS Bcen_2058 NC_008060.1 2273030 2274328 D PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_A5997 cytochrome c, class I; cytochrome c, class I 2273030..2274328 Burkholderia cenocepacia AU 1054 4091222 YP_621933.1 CDS Bcen_2059 NC_008060.1 2274466 2275926 D PFAM: helicase-like; DEAD/DEAH box helicase; KEGG: bur:Bcep18194_A5998 DEAD/DEAH box helicase; DEAD/DEAH box helicase 2274466..2275926 Burkholderia cenocepacia AU 1054 4091223 YP_621934.1 CDS Bcen_2060 NC_008060.1 2275920 2276426 R KEGG: bur:Bcep18194_A5999 hypothetical protein; hypothetical protein complement(2275920..2276426) Burkholderia cenocepacia AU 1054 4091224 YP_621935.1 CDS Bcen_2061 NC_008060.1 2276497 2277324 R KEGG: bur:Bcep18194_A6000 hypothetical protein; hypothetical protein complement(2276497..2277324) Burkholderia cenocepacia AU 1054 4091225 YP_621936.1 CDS Bcen_2062 NC_008060.1 2277652 2279292 R PFAM: gamma-glutamyltranspeptidase; KEGG: bur:Bcep18194_A6001 gamma-glutamyltransferase; gamma-glutamyltransferase complement(2277652..2279292) Burkholderia cenocepacia AU 1054 4091226 YP_621937.1 CDS Bcen_2063 NC_008060.1 2279399 2280283 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11; KEGG: bur:Bcep18194_A6002 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 2279399..2280283 Burkholderia cenocepacia AU 1054 4091227 YP_621938.1 CDS Bcen_2064 NC_008060.1 2280585 2280782 D KEGG: bur:Bcep18194_A6003 hypothetical protein; hypothetical protein 2280585..2280782 Burkholderia cenocepacia AU 1054 4091228 YP_621939.1 CDS Bcen_2065 NC_008060.1 2280878 2281186 R KEGG: bur:Bcep18194_A6004 hypothetical protein; hypothetical protein complement(2280878..2281186) Burkholderia cenocepacia AU 1054 4091229 YP_621940.1 CDS glpD NC_008060.1 2281409 2282932 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 2281409..2282932 Burkholderia cenocepacia AU 1054 4091230 YP_621941.1 CDS glpK NC_008060.1 2283046 2284548 D Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 2283046..2284548 Burkholderia cenocepacia AU 1054 4091231 YP_621942.1 CDS Bcen_2068 NC_008060.1 2284629 2285345 D TIGRFAM: MIP family channel proteins; PFAM: major intrinsic protein; KEGG: bur:Bcep18194_A6007 aquaporin; MIP family channel protein 2284629..2285345 Burkholderia cenocepacia AU 1054 4091232 YP_621943.1 CDS Bcen_2069 NC_008060.1 2285388 2286656 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A6008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2285388..2286656) Burkholderia cenocepacia AU 1054 4091233 YP_621944.1 CDS Bcen_2070 NC_008060.1 2286661 2286969 R TIGRFAM: MocE Rieske [2Fe-2S]; PFAM: Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_A6009 Rieske (2Fe-2S) protein; MocE Rieske (2Fe-2S) complement(2286661..2286969) Burkholderia cenocepacia AU 1054 4091234 YP_621945.1 CDS Bcen_2071 NC_008060.1 2287006 2288088 R PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_A6010 fatty acid desaturase; fatty acid desaturase complement(2287006..2288088) Burkholderia cenocepacia AU 1054 4091235 YP_621946.1 CDS Bcen_2072 NC_008060.1 2288263 2289327 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A6011 regulatory protein, LacI; LacI family transcriptional regulator 2288263..2289327 Burkholderia cenocepacia AU 1054 4091236 YP_621947.1 CDS Bcen_2073 NC_008060.1 2289471 2290472 D KEGG: bur:Bcep18194_A6012 hypothetical protein; hypothetical protein 2289471..2290472 Burkholderia cenocepacia AU 1054 4091237 YP_621948.1 CDS Bcen_2074 NC_008060.1 2290513 2291337 D PFAM: Xylose isomerase-like TIM barrel; KEGG: bur:Bcep18194_A6013 xylose isomerase; xylose isomerase 2290513..2291337 Burkholderia cenocepacia AU 1054 4091238 YP_621949.1 CDS Bcen_2075 NC_008060.1 2291412 2292398 D PFAM: oxidoreductase-like; Oxidoreductase-like; KEGG: bur:Bcep18194_A6014 myo-inositol 2-dehydrogenase; myo-inositol 2-dehydrogenase 2291412..2292398 Burkholderia cenocepacia AU 1054 4091239 YP_621950.1 CDS Bcen_2076 NC_008060.1 2292539 2293273 D TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_A6015 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase 2292539..2293273 Burkholderia cenocepacia AU 1054 4091240 YP_621951.1 CDS Bcen_2077 NC_008060.1 2293344 2294054 R PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: bur:Bcep18194_A6016 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(2293344..2294054) Burkholderia cenocepacia AU 1054 4091241 YP_621952.1 CDS Bcen_2078 NC_008060.1 2294509 2295195 R PFAM: helix-turn-helix motif; Cupin 2, conserved barrel; KEGG: bur:Bcep18194_A6018 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(2294509..2295195) Burkholderia cenocepacia AU 1054 4091243 YP_621953.1 CDS Bcen_2079 NC_008060.1 2295415 2296665 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A6019 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2295415..2296665) Burkholderia cenocepacia AU 1054 4091244 YP_621954.1 CDS Bcen_2080 NC_008060.1 2296693 2297670 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bps:BPSL0675 LysR family transcriptional regulator; LysR family transcriptional regulator 2296693..2297670 Burkholderia cenocepacia AU 1054 4091245 YP_621955.1 CDS Bcen_2081 NC_008060.1 2297880 2299253 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2297880..2299253 Burkholderia cenocepacia AU 1054 4091246 YP_621956.1 CDS Bcen_2082 NC_008060.1 2299287 2300333 D PFAM: PhoH-like protein; KEGG: bur:Bcep18194_A6022 PhoH-like protein; PhoH-like protein 2299287..2300333 Burkholderia cenocepacia AU 1054 4091247 YP_621957.1 CDS Bcen_2083 NC_008060.1 2300476 2301252 D contains unknown N-terminal domain/ metalloprotease C-terminal domain; unkown domain/ metalloprotease fusion protein 2300476..2301252 Burkholderia cenocepacia AU 1054 4091248 YP_621958.1 CDS Bcen_2084 NC_008060.1 2301265 2301897 D PFAM: ChaC-like protein; KEGG: bur:Bcep18194_A6024 ChaC-like protein; ChaC-like protein 2301265..2301897 Burkholderia cenocepacia AU 1054 4091249 YP_621959.1 CDS Bcen_2085 NC_008060.1 2301995 2302240 R hypothetical protein complement(2301995..2302240) Burkholderia cenocepacia AU 1054 4091250 YP_621960.1 CDS Bcen_2086 NC_008060.1 2302433 2303320 D PFAM: CBS; transporter-associated region; KEGG: bur:Bcep18194_A6025 Mg2+ and Co2+ transporter CorC; transporter-associated protein 2302433..2303320 Burkholderia cenocepacia AU 1054 4091251 YP_621961.1 CDS lnt NC_008060.1 2303373 2305076 D Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 2303373..2305076 Burkholderia cenocepacia AU 1054 4091252 YP_621962.1 CDS Bcen_2088 NC_008060.1 2305158 2306960 R PFAM: TPR repeat; Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: bur:Bcep18194_A6027 TPR repeat protein; hypothetical protein complement(2305158..2306960) Burkholderia cenocepacia AU 1054 4091253 YP_621963.1 CDS glyQ NC_008060.1 2307088 2308092 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 2307088..2308092 Burkholderia cenocepacia AU 1054 4091254 YP_621964.1 CDS glyS NC_008060.1 2308115 2310214 D glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 2308115..2310214 Burkholderia cenocepacia AU 1054 4091255 YP_621965.1 CDS Bcen_2091 NC_008060.1 2310225 2310788 D Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 2310225..2310788 Burkholderia cenocepacia AU 1054 4091256 YP_621966.1 CDS Bcen_2092 NC_008060.1 2310832 2311596 D PFAM: phospholipid/glycerol acyltransferase; KEGG: bur:Bcep18194_A6031 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2310832..2311596 Burkholderia cenocepacia AU 1054 4091257 YP_621967.1 CDS Bcen_2093 NC_008060.1 2311642 2312529 D PFAM: protein of unknown function DUF45; KEGG: bur:Bcep18194_A6032 protein of unknown function DUF45; hypothetical protein 2311642..2312529 Burkholderia cenocepacia AU 1054 4091258 YP_621968.1 CDS Bcen_2094 NC_008060.1 2312630 2313013 R KEGG: bur:Bcep18194_A6033 glyoxalase I TIGRFAM: Glyoxalase I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase I complement(2312630..2313013) Burkholderia cenocepacia AU 1054 4091104 YP_621969.1 CDS Bcen_2095 NC_008060.1 2313362 2314297 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_A6034 protein of unknown function DUF6, transmembrane; hypothetical protein 2313362..2314297 Burkholderia cenocepacia AU 1054 4091105 YP_621970.1 CDS ksgA NC_008060.1 2314392 2315219 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(2314392..2315219) Burkholderia cenocepacia AU 1054 4091106 YP_621971.1 CDS pdxA NC_008060.1 2315267 2316256 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(2315267..2316256) Burkholderia cenocepacia AU 1054 4091107 YP_621972.1 CDS Bcen_2098 NC_008060.1 2316267 2317625 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bur:Bcep18194_A6037 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2316267..2317625) Burkholderia cenocepacia AU 1054 4091108 YP_621973.1 CDS Bcen_2099 NC_008060.1 2317677 2320037 R PFAM: Organic solvent tolerance protein; KEGG: bur:Bcep18194_A6038 organic solvent tolerance protein; organic solvent tolerance protein complement(2317677..2320037) Burkholderia cenocepacia AU 1054 4091109 YP_621974.1 CDS Bcen_2100 NC_008060.1 2320259 2321308 D PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_A6039 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2320259..2321308 Burkholderia cenocepacia AU 1054 4091110 YP_621975.1 CDS Bcen_2101 NC_008060.1 2321331 2322053 D PFAM: Nucleotidyl transferase; KEGG: bur:Bcep18194_A6040 nucleotidyl transferase; nucleotidyl transferase 2321331..2322053 Burkholderia cenocepacia AU 1054 4091111 YP_621976.1 CDS Bcen_2102 NC_008060.1 2322274 2324145 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A6041 ABC transporter, fused ATPase and innermembrane subunits; ABC transporter complement(2322274..2324145) Burkholderia cenocepacia AU 1054 4091112 YP_621977.1 CDS Bcen_2103 NC_008060.1 2324306 2324716 D PFAM: thioesterase superfamily; KEGG: bur:Bcep18194_A6042 thioesterase superfamily; thioesterase 2324306..2324716 Burkholderia cenocepacia AU 1054 4091113 YP_621978.1 CDS Bcen_2104 NC_008060.1 2324771 2325253 R TIGRFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A6043 hypothetical protein; hypothetical protein complement(2324771..2325253) Burkholderia cenocepacia AU 1054 4091114 YP_621979.1 CDS Bcen_2105 NC_008060.1 2325368 2326222 D TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; KEGG: bur:Bcep18194_A6044 formate dehydrogenase, subunit FdhD; formate dehydrogenase family accessory protein FdhD 2325368..2326222 Burkholderia cenocepacia AU 1054 4091115 YP_621980.1 CDS Bcen_2106 NC_008060.1 2326274 2327041 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(2326274..2327041) Burkholderia cenocepacia AU 1054 4091116 YP_621981.1 CDS Bcen_2107 NC_008060.1 2327133 2328332 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(2327133..2328332) Burkholderia cenocepacia AU 1054 4091117 YP_621982.1 CDS Bcen_2108 NC_008060.1 2328355 2330883 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase-like; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A6047 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase complement(2328355..2330883) Burkholderia cenocepacia AU 1054 4091118 YP_621983.1 CDS Bcen_2109 NC_008060.1 2330909 2332696 R PFAM: acyl-CoA dehydrogenase-like; KEGG: bur:Bcep18194_A6048 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase complement(2330909..2332696) Burkholderia cenocepacia AU 1054 4091119 YP_621984.1 CDS Bcen_2110 NC_008060.1 2332755 2333354 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_A6049 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2332755..2333354) Burkholderia cenocepacia AU 1054 4091120 YP_621985.1 CDS Bcen_2111 NC_008060.1 2333554 2334828 R PFAM: phospholipase D/Transphosphatidylase; KEGG: bur:Bcep18194_A6050 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase complement(2333554..2334828) Burkholderia cenocepacia AU 1054 4091121 YP_621986.1 CDS ntpA NC_008060.1 2334825 2335319 R converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase complement(2334825..2335319) Burkholderia cenocepacia AU 1054 4091122 YP_621987.1 CDS aspS NC_008060.1 2335478 2337280 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(2335478..2337280) Burkholderia cenocepacia AU 1054 4091123 YP_621988.1 CDS Bcen_2114 NC_008060.1 2337348 2337998 R PFAM: protein of unknown function DUF502; KEGG: bur:Bcep18194_A6053 protein of unknown function DUF502; hypothetical protein complement(2337348..2337998) Burkholderia cenocepacia AU 1054 4091124 YP_621989.1 CDS Bcen_2115 NC_008060.1 2338060 2338413 R TIGRFAM: Putative regulatory protein, FmdB; KEGG: bur:Bcep18194_A6054 hypothetical protein; FmdB transcriptional regulator complement(2338060..2338413) Burkholderia cenocepacia AU 1054 4091125 YP_621990.1 CDS Bcen_2116 NC_008060.1 2338509 2339135 R PFAM: thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: bur:Bcep18194_A6055 thiopurine S-methyltransferase; thiopurine S-methyltransferase complement(2338509..2339135) Burkholderia cenocepacia AU 1054 4091126 YP_621991.1 CDS ubiB NC_008060.1 2339153 2340730 R an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB complement(2339153..2340730) Burkholderia cenocepacia AU 1054 4091127 YP_621992.1 CDS Bcen_2118 NC_008060.1 2340743 2341369 R PFAM: protein of unknown function DUF1243; KEGG: bur:Bcep18194_A6057 protein of unknown function DUF1243; hypothetical protein complement(2340743..2341369) Burkholderia cenocepacia AU 1054 4091128 YP_621993.1 CDS Bcen_2119 NC_008060.1 2341534 2342565 R PFAM: import inner membrane translocase, subunit Tim44; KEGG: bur:Bcep18194_A6058 transporter; import inner membrane translocase, subunit Tim44 complement(2341534..2342565) Burkholderia cenocepacia AU 1054 4091129 YP_621994.1 CDS ubiE NC_008060.1 2342607 2343338 R Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase complement(2342607..2343338) Burkholderia cenocepacia AU 1054 4091130 YP_621995.1 CDS Bcen_2121 NC_008060.1 2343391 2343804 R PFAM: protein of unknown function DUF971; KEGG: bur:Bcep18194_A6060 protein of unknown function DUF971; hypothetical protein complement(2343391..2343804) Burkholderia cenocepacia AU 1054 4091131 YP_621996.1 CDS Bcen_2122 NC_008060.1 2343801 2344244 R PFAM: histidine triad (HIT) protein; KEGG: bur:Bcep18194_A6061 histidine triad (HIT) protein; histidine triad (HIT) protein complement(2343801..2344244) Burkholderia cenocepacia AU 1054 4091132 YP_621997.1 CDS Bcen_2123 NC_008060.1 2344329 2348354 R PFAM: protein of unknown function DUF224, cysteine-rich region; FAD linked oxidase-like; KEGG: bur:Bcep18194_A6062 hypothetical protein; FAD linked oxidase-like protein complement(2344329..2348354) Burkholderia cenocepacia AU 1054 4091133 YP_621998.1 CDS Bcen_2124 NC_008060.1 2348953 2350476 D threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 2348953..2350476 Burkholderia cenocepacia AU 1054 4091134 YP_621999.1 CDS queF NC_008060.1 2350489 2351319 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2350489..2351319 Burkholderia cenocepacia AU 1054 4091135 YP_622000.1 CDS Bcen_2126 NC_008060.1 2351371 2351790 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A6066 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2351371..2351790) Burkholderia cenocepacia AU 1054 4091136 YP_622001.1 CDS Bcen_2127 NC_008060.1 2351963 2352349 R PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_A6067 endoribonuclease L-PSP; endoribonuclease L-PSP complement(2351963..2352349) Burkholderia cenocepacia AU 1054 4091137 YP_622002.1 CDS Bcen_2128 NC_008060.1 2352428 2353909 R PFAM: amidohydrolase; D-aminoacylase-like; Amidohydrolase 3; KEGG: bur:Bcep18194_A6068 N-acyl-D-amino-acid deacylase; N-acyl-D-amino-acid deacylase complement(2352428..2353909) Burkholderia cenocepacia AU 1054 4091138 YP_622003.1 CDS Bcen_2129 NC_008060.1 2353912 2354850 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bur:Bcep18194_A6069 transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(2353912..2354850) Burkholderia cenocepacia AU 1054 4091139 YP_622004.1 CDS Bcen_2130 NC_008060.1 2354970 2356250 D KEGG: bur:Bcep18194_A6070 amino acid aldolase or racemase-like; amino acid aldolase-like protein 2354970..2356250 Burkholderia cenocepacia AU 1054 4091140 YP_622005.1 CDS Bcen_2131 NC_008060.1 2356408 2356989 D TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI; KEGG: bur:Bcep18194_A6071 peptidase C56, PfpI; peptidase C56, PfpI 2356408..2356989 Burkholderia cenocepacia AU 1054 4091141 YP_622006.1 CDS Bcen_2132 NC_008060.1 2357058 2357504 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_A6072 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(2357058..2357504) Burkholderia cenocepacia AU 1054 4091142 YP_622007.1 CDS Bcen_2133 NC_008060.1 2357559 2359154 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A6073 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2357559..2359154) Burkholderia cenocepacia AU 1054 4091182 YP_622008.1 CDS Bcen_2134 NC_008060.1 2359262 2360104 D KEGG: bur:Bcep18194_A6074 hypothetical protein; hypothetical protein 2359262..2360104 Burkholderia cenocepacia AU 1054 4091183 YP_622009.1 CDS Bcen_2135 NC_008060.1 2360074 2361036 R PFAM: Alpha/beta hydrolase fold-3; KEGG: bur:Bcep18194_A6075 lipolytic enzyme; Alpha/beta hydrolase fold-3 complement(2360074..2361036) Burkholderia cenocepacia AU 1054 4091184 YP_622010.1 CDS Bcen_2136 NC_008060.1 2361126 2361560 R PFAM: CHRD; KEGG: bur:Bcep18194_A6077 CHRD domain protein; CHRD domain-containing protein complement(2361126..2361560) Burkholderia cenocepacia AU 1054 4091185 YP_622011.1 CDS Bcen_2137 NC_008060.1 2362058 2363059 D KEGG: bpm:BURPS1710b_0825 hypothetical protein; hypothetical protein 2362058..2363059 Burkholderia cenocepacia AU 1054 4091186 YP_622012.1 CDS Bcen_2138 NC_008060.1 2363091 2363864 R PFAM: class II aldolase/adducin-like; KEGG: bur:Bcep18194_A6078 class II aldolase/adducin-like; aldolase II superfamily protein complement(2363091..2363864) Burkholderia cenocepacia AU 1054 4091187 YP_622013.1 CDS Bcen_2139 NC_008060.1 2364118 2365740 R PFAM: phospholipase D/Transphosphatidylase; KEGG: bur:Bcep18194_A6079 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase complement(2364118..2365740) Burkholderia cenocepacia AU 1054 4091188 YP_622014.1 CDS Bcen_2140 NC_008060.1 2365887 2366069 R KEGG: bur:Bcep18194_A6080 transcriptional regulator, GntR family; hypothetical protein complement(2365887..2366069) Burkholderia cenocepacia AU 1054 4091189 YP_622015.1 CDS Bcen_2141 NC_008060.1 2366121 2366354 R KEGG: bur:Bcep18194_A6080 transcriptional regulator, GntR family; hypothetical protein complement(2366121..2366354) Burkholderia cenocepacia AU 1054 4091190 YP_622016.1 CDS Bcen_2142 NC_008060.1 2366402 2368216 R PFAM: peptidase M48, Ste24p; KEGG: bur:Bcep18194_A6085 peptidase M48, Ste24p; peptidase M48, Ste24p complement(2366402..2368216) Burkholderia cenocepacia AU 1054 4091191 YP_622017.1 CDS Bcen_2143 NC_008060.1 2368275 2369567 R PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_A6087 endoribonuclease L-PSP; endoribonuclease L-PSP complement(2368275..2369567) Burkholderia cenocepacia AU 1054 4091192 YP_622018.1 CDS Bcen_2144 NC_008060.1 2369617 2370333 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A6088 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(2369617..2370333) Burkholderia cenocepacia AU 1054 4091193 YP_622019.1 CDS Bcen_2145 NC_008060.1 2370403 2370687 R Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein complement(2370403..2370687) Burkholderia cenocepacia AU 1054 4091194 YP_622020.1 CDS Bcen_2146 NC_008060.1 2370849 2371886 D KEGG: bur:Bcep18194_A6090 membrane protein-like; membrane protein-like protein 2370849..2371886 Burkholderia cenocepacia AU 1054 4091195 YP_622021.1 CDS Bcen_2147 NC_008060.1 2371947 2373719 D KEGG: bur:Bcep18194_A6091 acyl-coenzyme A synthetases/AMP-(fatty) acid ligases-like; acyl-coenzyme A synthetase/AMP-(fatty) acid ligase-like protein 2371947..2373719 Burkholderia cenocepacia AU 1054 4091196 YP_622022.1 CDS Bcen_2148 NC_008060.1 2373716 2374699 D KEGG: bur:Bcep18194_A6092 acyltransferase-like; acyltransferase-like protein 2373716..2374699 Burkholderia cenocepacia AU 1054 4091197 YP_622023.1 CDS Bcen_2149 NC_008060.1 2374696 2375337 D KEGG: bur:Bcep18194_A6093 hypothetical protein; hypothetical protein 2374696..2375337 Burkholderia cenocepacia AU 1054 4091198 YP_622024.1 CDS Bcen_2150 NC_008060.1 2375337 2377823 D KEGG: bur:Bcep18194_A6094 MmpL family membrane protein; exporter-like protein 2375337..2377823 Burkholderia cenocepacia AU 1054 4091199 YP_622025.1 CDS Bcen_2151 NC_008060.1 2377820 2378704 D PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_A6095 polysaccharide deacetylase; polysaccharide deacetylase 2377820..2378704 Burkholderia cenocepacia AU 1054 4091200 YP_622026.1 CDS Bcen_2152 NC_008060.1 2378720 2379991 D FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 2378720..2379991 Burkholderia cenocepacia AU 1054 4091201 YP_622027.1 CDS Bcen_2153 NC_008060.1 2380000 2380818 D KEGG: bur:Bcep18194_A6097 hypothetical protein; hypothetical protein 2380000..2380818 Burkholderia cenocepacia AU 1054 4091202 YP_622028.1 CDS Bcen_2154 NC_008060.1 2380815 2381318 D KEGG: bur:Bcep18194_A6098 3-hydroxylacyl-(acyl carrier protein) dehydratase-like; 3-hydroxylacyl-(acyl carrier protein) dehydratase-like protein 2380815..2381318 Burkholderia cenocepacia AU 1054 4091203 YP_622029.1 CDS Bcen_2155 NC_008060.1 2381315 2381644 D KEGG: bur:Bcep18194_A6099 hypothetical protein; hypothetical protein 2381315..2381644 Burkholderia cenocepacia AU 1054 4091204 YP_622030.1 CDS Bcen_2156 NC_008060.1 2381746 2381952 R KEGG: bur:Bcep18194_A6100 hypothetical protein; hypothetical protein complement(2381746..2381952) Burkholderia cenocepacia AU 1054 4091205 YP_622031.1 CDS Bcen_2157 NC_008060.1 2382060 2382854 R TIGRFAM: Acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A6101 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase complement(2382060..2382854) Burkholderia cenocepacia AU 1054 4091206 YP_622032.1 CDS Bcen_2158 NC_008060.1 2383022 2384203 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(2383022..2384203) Burkholderia cenocepacia AU 1054 4091207 YP_622033.1 CDS Bcen_2159 NC_008060.1 2384529 2385113 R TIGRFAM: Phasin; KEGG: bur:Bcep18194_A6103 phasin; phasin complement(2384529..2385113) Burkholderia cenocepacia AU 1054 4091208 YP_622034.1 CDS Bcen_2160 NC_008060.1 2385613 2386377 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bur:Bcep18194_A6104 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(2385613..2386377) Burkholderia cenocepacia AU 1054 4091209 YP_622035.1 CDS Bcen_2161 NC_008060.1 2386491 2387114 R responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase complement(2386491..2387114) Burkholderia cenocepacia AU 1054 4091210 YP_622036.1 CDS Bcen_2162 NC_008060.1 2387101 2387631 R PFAM: Uracil-DNA glycosylase superfamily; KEGG: bur:Bcep18194_A6106 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase complement(2387101..2387631) Burkholderia cenocepacia AU 1054 4091211 YP_622037.1 CDS Bcen_2163 NC_008060.1 2387754 2388308 R binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein complement(2387754..2388308) Burkholderia cenocepacia AU 1054 4091212 YP_622038.1 CDS Bcen_2164 NC_008060.1 2388411 2389598 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A6108 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2388411..2389598) Burkholderia cenocepacia AU 1054 4091213 YP_622039.1 CDS Bcen_2165 NC_008060.1 2389863 2392748 D TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bur:Bcep18194_A6109 excinuclease ABC, A subunit; excinuclease ABC subunit A 2389863..2392748 Burkholderia cenocepacia AU 1054 4091214 YP_622040.1 CDS Bcen_2166 NC_008060.1 2392988 2394070 D KEGG: bur:Bcep18194_A6110 transporter; transporter 2392988..2394070 Burkholderia cenocepacia AU 1054 4091215 YP_622041.1 CDS purU NC_008060.1 2394164 2395048 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(2394164..2395048) Burkholderia cenocepacia AU 1054 4091216 YP_622042.1 CDS Bcen_2168 NC_008060.1 2395122 2395988 R PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A6112 NUDIX hydrolase; NUDIX hydrolase complement(2395122..2395988) Burkholderia cenocepacia AU 1054 4091217 YP_622043.1 CDS Bcen_2169 NC_008060.1 2395994 2396677 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_A6113 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA complement(2395994..2396677) Burkholderia cenocepacia AU 1054 4091218 YP_622044.1 CDS Bcen_2170 NC_008060.1 2396695 2397261 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(2396695..2397261) Burkholderia cenocepacia AU 1054 4091219 YP_622045.1 CDS Bcen_2171 NC_008060.1 2397339 2399345 R PFAM: TrkA-N; TrkA-C; sodium/hydrogen exchanger; KEGG: bur:Bcep18194_A6115 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(2397339..2399345) Burkholderia cenocepacia AU 1054 4091220 YP_622046.1 CDS Bcen_2172 NC_008060.1 2399470 2400453 D KEGG: bur:Bcep18194_A6116 sugar isomerase, KpsF/GutQ family TIGRFAM: KpsF/GutQ family protein; PFAM: CBS; sugar isomerase (SIS); KpsF/GutQ family protein 2399470..2400453 Burkholderia cenocepacia AU 1054 4092104 YP_622047.1 CDS Bcen_2173 NC_008060.1 2400453 2400989 D TIGRFAM: Phosphatase kdsC; KEGG: bur:Bcep18194_A6117 phosphatase KdsC; phosphatase kdsC 2400453..2400989 Burkholderia cenocepacia AU 1054 4092105 YP_622048.1 CDS Bcen_2174 NC_008060.1 2400993 2401607 D PFAM: protein of unknown function DUF1239; KEGG: bur:Bcep18194_A6118 protein of unknown function DUF1239; hypothetical protein 2400993..2401607 Burkholderia cenocepacia AU 1054 4092106 YP_622049.1 CDS Bcen_2175 NC_008060.1 2401628 2402293 D PFAM: OstA-like protein; KEGG: bur:Bcep18194_A6119 OstA-like protein; OstA-like protein 2401628..2402293 Burkholderia cenocepacia AU 1054 4092107 YP_622050.1 CDS Bcen_2176 NC_008060.1 2402290 2403066 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A6120 ABC transporter, ATPase subunit; ABC transporter 2402290..2403066 Burkholderia cenocepacia AU 1054 4092108 YP_622051.1 CDS Bcen_2177 NC_008060.1 2403239 2404735 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 2403239..2404735 Burkholderia cenocepacia AU 1054 4092109 YP_622052.1 CDS Bcen_2178 NC_008060.1 2404894 2405253 D TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: bur:Bcep18194_A6122 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 2404894..2405253 Burkholderia cenocepacia AU 1054 4092110 YP_622053.1 CDS Bcen_2179 NC_008060.1 2405420 2405959 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: bur:Bcep18194_A6123 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 2405420..2405959 Burkholderia cenocepacia AU 1054 4092111 YP_622054.1 CDS Bcen_2180 NC_008060.1 2406089 2407057 D catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 2406089..2407057 Burkholderia cenocepacia AU 1054 4092112 YP_622055.1 CDS Bcen_2181 NC_008060.1 2407132 2408040 D PFAM: Uncharacterised P-loop ATPase protein UPF0042; KEGG: bur:Bcep18194_A6125 uncharacterized P-loop ATPase protein UPF0042; hypothetical protein 2407132..2408040 Burkholderia cenocepacia AU 1054 4092113 YP_622056.1 CDS Bcen_2182 NC_008060.1 2408068 2408703 D PFAM: peptidase S16, lon-like; KEGG: bur:Bcep18194_A6126 peptidase S16, lon-like; peptidase S16, lon-like 2408068..2408703 Burkholderia cenocepacia AU 1054 4092114 YP_622057.1 CDS Bcen_2183 NC_008060.1 2408818 2409924 R TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD; KEGG: bur:Bcep18194_A6127 A/G-specific adenine glycosylase MutY; A/G-specific adenine glycosylase complement(2408818..2409924) Burkholderia cenocepacia AU 1054 4092115 YP_622058.1 CDS Bcen_2184 NC_008060.1 2409949 2410776 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(2409949..2410776) Burkholderia cenocepacia AU 1054 4092116 YP_622059.1 CDS Bcen_2185 NC_008060.1 2411023 2412846 D PFAM: TPR repeat; Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: bur:Bcep18194_A6129 TPR repeat protein; hypothetical protein 2411023..2412846 Burkholderia cenocepacia AU 1054 4092117 YP_622060.1 CDS lolB NC_008060.1 2412846 2413466 D Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 2412846..2413466 Burkholderia cenocepacia AU 1054 4092118 YP_622061.1 CDS ipk NC_008060.1 2413493 2414374 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2413493..2414374 Burkholderia cenocepacia AU 1054 4092119 YP_622062.1 CDS Bcen_2188 NC_008060.1 2414551 2415513 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2414551..2415513 Burkholderia cenocepacia AU 1054 4092121 YP_622063.1 CDS Bcen_2189 NC_008060.1 2415672 2416277 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 2415672..2416277 Burkholderia cenocepacia AU 1054 4092122 YP_622064.1 CDS Bcen_2190 NC_008060.1 2416398 2416997 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2416398..2416997 Burkholderia cenocepacia AU 1054 4092123 YP_622065.1 CDS Bcen_2191 NC_008060.1 2417115 2418182 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2417115..2418182 Burkholderia cenocepacia AU 1054 4092124 YP_622066.1 CDS Bcen_2192 NC_008060.1 2418265 2418531 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: bur:Bcep18194_A6136 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin complement(2418265..2418531) Burkholderia cenocepacia AU 1054 4092125 YP_622067.1 CDS coaD NC_008060.1 2418590 2419087 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(2418590..2419087) Burkholderia cenocepacia AU 1054 4092126 YP_622068.1 CDS Bcen_2194 NC_008060.1 2419199 2419813 R PFAM: conserved hypothetical protein 95; KEGG: bur:Bcep18194_A6138 hypothetical protein; hypothetical protein complement(2419199..2419813) Burkholderia cenocepacia AU 1054 4092127 YP_622069.1 CDS Bcen_2195 NC_008060.1 2420213 2421196 D KEGG: bur:Bcep18194_A6139 cell division transporter substrate-binding protein FtsY TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G-domain; SMART: ATPase; signal recognition particle-docking protein FtsY 2420213..2421196 Burkholderia cenocepacia AU 1054 4092128 YP_622070.1 CDS Bcen_2196 NC_008060.1 2421296 2421940 R TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_A6140 maleylacetoacetate isomerase; maleylacetoacetate isomerase complement(2421296..2421940) Burkholderia cenocepacia AU 1054 4092129 YP_622071.1 CDS Bcen_2197 NC_008060.1 2422120 2423094 D PFAM: glycosyl transferase, family 3; KEGG: bur:Bcep18194_A6141 glycosyl transferase, family 3; glycosyl transferase family protein 2422120..2423094 Burkholderia cenocepacia AU 1054 4092130 YP_622072.1 CDS Bcen_2198 NC_008060.1 2423472 2425118 D KEGG: bur:Bcep18194_A6142 yeast 2-isopropylmalate synthase TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; 2-isopropylmalate synthase 2423472..2425118 Burkholderia cenocepacia AU 1054 4092131 YP_622073.1 CDS Bcen_2199 NC_008060.1 2425262 2425645 R TIGRFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A6143 hypothetical protein; hypothetical protein complement(2425262..2425645) Burkholderia cenocepacia AU 1054 4092132 YP_622074.1 CDS Bcen_2200 NC_008060.1 2425691 2426260 R KEGG: bur:Bcep18194_A6144 hypothetical protein; hypothetical protein complement(2425691..2426260) Burkholderia cenocepacia AU 1054 4092133 YP_622075.1 CDS Bcen_2201 NC_008060.1 2426621 2427556 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 2426621..2427556 Burkholderia cenocepacia AU 1054 4092134 YP_622076.1 CDS Bcen_2202 NC_008060.1 2427922 2428197 D KEGG: bur:Bcep18194_A6146 hypothetical protein; hypothetical protein 2427922..2428197 Burkholderia cenocepacia AU 1054 4092135 YP_622077.1 CDS Bcen_2203 NC_008060.1 2428187 2429767 D PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: bur:Bcep18194_A6147 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase, subunit I 2428187..2429767 Burkholderia cenocepacia AU 1054 4092136 YP_622078.1 CDS Bcen_2204 NC_008060.1 2429799 2430935 D TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: bur:Bcep18194_A6148 cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase, subunit II 2429799..2430935 Burkholderia cenocepacia AU 1054 4092137 YP_622079.1 CDS Bcen_2205 NC_008060.1 2430998 2431120 D TIGRFAM: Cyd operon protein YbgT; PFAM: membrane bound YbgT-like; KEGG: bur:Bcep18194_A6149 Cyd operon protein YbgT; Cyd operon protein YbgT 2430998..2431120 Burkholderia cenocepacia AU 1054 4092138 YP_622080.1 CDS Bcen_2206 NC_008060.1 2431677 2434190 D PFAM: glycoside hydrolase, family 20; Carbohydrate-binding, chitobiase/hexosaminidase-type-like; KEGG: bur:Bcep18194_A6150 beta-N-acetylhexosaminidase; Beta-N-acetylhexosaminidase 2431677..2434190 Burkholderia cenocepacia AU 1054 4092139 YP_622081.1 CDS Bcen_2207 NC_008060.1 2434384 2436153 R TIGRFAM: Phosphotransferase system, N-acetylglucosamine-specific IIBC component; PTS system, glucose-like IIB component; PFAM: phosphotransferase system PTS, EIIB; phosphotransferase system, EIIC; KEGG: bur:Bcep18194_A6151 PTS system, N-acetylglucosamine-specific IIBC component; phosphotransferase system, N-acetylglucosamine-specific IIBC component complement(2434384..2436153) Burkholderia cenocepacia AU 1054 4092140 YP_622082.1 CDS Bcen_2208 NC_008060.1 2436452 2437417 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902; KEGG: gme:Gmet_3429 IS111A/IS1328/IS1533/IS116/IS110/IS902 transposase; transposase IS116/IS110/IS902 2436452..2437417 Burkholderia cenocepacia AU 1054 4092141 YP_622083.1 CDS Bcen_2209 NC_008060.1 2437434 2440016 R TIGRFAM: PTS system, glucose subfamily, IIA component; Phosphotransferase system, HPr; Phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing enzyme; sugar-specific permease, EIIA 1 domain; PEP-utilising enzyme, mobile region; PEP-utilising enzyme-like; KEGG: bur:Bcep18194_A6152 phosphoryl transfer system, HPr/phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase complement(2437434..2440016) Burkholderia cenocepacia AU 1054 4093616 YP_622084.1 CDS Bcen_2210 NC_008060.1 2440032 2441063 R PFAM: sugar isomerase (SIS); KEGG: bur:Bcep18194_A6153 glutamine-fructose-6-phosphate transaminase (isomerizing); glutamine-fructose-6-phosphate transaminase (isomerizing) complement(2440032..2441063) Burkholderia cenocepacia AU 1054 4093617 YP_622085.1 CDS Bcen_2211 NC_008060.1 2441056 2442159 R KEGG: bur:Bcep18194_A6154 N-acetylglucosamine-6-phosphate deacetylase TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase complement(2441056..2442159) Burkholderia cenocepacia AU 1054 4093618 YP_622086.1 CDS Bcen_2212 NC_008060.1 2442282 2443016 R PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated; KEGG: bur:Bcep18194_A6155 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2442282..2443016) Burkholderia cenocepacia AU 1054 4093619 YP_622087.1 CDS dnaE2 NC_008060.1 2443329 2446544 R DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase complement(2443329..2446544) Burkholderia cenocepacia AU 1054 4093620 YP_622088.1 CDS Bcen_2214 NC_008060.1 2446551 2448002 R KEGG: bur:Bcep18194_A6157 hypothetical protein; hypothetical protein complement(2446551..2448002) Burkholderia cenocepacia AU 1054 4093621 YP_622089.1 CDS Bcen_2215 NC_008060.1 2447980 2448687 R KEGG: bur:Bcep18194_A6158 hypothetical protein; hypothetical protein complement(2447980..2448687) Burkholderia cenocepacia AU 1054 4093622 YP_622090.1 CDS Bcen_2216 NC_008060.1 2448854 2449648 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A6159 ABC transporter, ATPase subunit; ABC transporter complement(2448854..2449648) Burkholderia cenocepacia AU 1054 4093623 YP_622091.1 CDS Bcen_2217 NC_008060.1 2449650 2450546 R PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A6160 ABC transporter, inner membrane subunit; inner-membrane translocator complement(2449650..2450546) Burkholderia cenocepacia AU 1054 4093624 YP_622092.1 CDS Bcen_2218 NC_008060.1 2450686 2451651 R PFAM: protein of unknown function DUF534; KEGG: bur:Bcep18194_A6161 protein of unknown function DUF534; hypothetical protein complement(2450686..2451651) Burkholderia cenocepacia AU 1054 4093625 YP_622093.1 CDS Bcen_2219 NC_008060.1 2451946 2452293 D KEGG: bur:Bcep18194_A6162 hypothetical protein; hypothetical protein 2451946..2452293 Burkholderia cenocepacia AU 1054 4093626 YP_622094.1 CDS Bcen_2220 NC_008060.1 2452373 2453188 R TIGRFAM: Lipoprotein YaeC; Twin-arginine translocation pathway signal; PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_A6163 lipoprotein YaeC; lipoprotein YaeC complement(2452373..2453188) Burkholderia cenocepacia AU 1054 4093627 YP_622095.1 CDS Bcen_2221 NC_008060.1 2453400 2455037 R PFAM: chemotaxis sensory transducer; Cache, type 2; KEGG: bur:Bcep18194_A6164 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2453400..2455037) Burkholderia cenocepacia AU 1054 4093628 YP_622096.1 CDS Bcen_2222 NC_008060.1 2455265 2455555 D PFAM: YCII-related; KEGG: bur:Bcep18194_A6165 YCII-related protein; YCII-related 2455265..2455555 Burkholderia cenocepacia AU 1054 4093629 YP_622097.1 CDS Bcen_2223 NC_008060.1 2455709 2456326 R PFAM: electron transport protein SCO1/SenC; KEGG: bur:Bcep18194_A6166 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC complement(2455709..2456326) Burkholderia cenocepacia AU 1054 4093630 YP_622098.1 CDS Bcen_2224 NC_008060.1 2456345 2457247 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(2456345..2457247) Burkholderia cenocepacia AU 1054 4093631 YP_622099.1 CDS Bcen_2225 NC_008060.1 2457256 2458368 R PFAM: cytochrome oxidase assembly; KEGG: bur:Bcep18194_A6168 cytochrome oxidase assembly; cytochrome oxidase assembly complement(2457256..2458368) Burkholderia cenocepacia AU 1054 4093632 YP_622100.1 CDS Bcen_2226 NC_008060.1 2458394 2459020 R KEGG: bur:Bcep18194_A6169 hypothetical protein; hypothetical protein complement(2458394..2459020) Burkholderia cenocepacia AU 1054 4093633 YP_622101.1 CDS Bcen_2227 NC_008060.1 2459081 2460124 R PFAM: Surfeit locus 1; KEGG: bpm:BURPS1710b_0679 SURF1 family protein; Surfeit locus 1 complement(2459081..2460124) Burkholderia cenocepacia AU 1054 4093634 YP_622102.1 CDS Bcen_2228 NC_008060.1 2460260 2461117 R PFAM: cytochrome c oxidase, subunit III; KEGG: bur:Bcep18194_A6172 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III complement(2460260..2461117) Burkholderia cenocepacia AU 1054 4093635 YP_622103.1 CDS Bcen_2229 NC_008060.1 2461292 2461492 R KEGG: bur:Bcep18194_A6173 hypothetical protein; hypothetical protein complement(2461292..2461492) Burkholderia cenocepacia AU 1054 4093636 YP_622104.1 CDS Bcen_2230 NC_008060.1 2461509 2462117 R involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein complement(2461509..2462117) Burkholderia cenocepacia AU 1054 4093637 YP_622105.1 CDS Bcen_2231 NC_008060.1 2462153 2462293 R KEGG: bpm:BURPS1710b_0674 membrane protein; hypothetical protein complement(2462153..2462293) Burkholderia cenocepacia AU 1054 4093638 YP_622106.1 CDS Bcen_2232 NC_008060.1 2462374 2463981 R PFAM: cytochrome c oxidase, subunit I; KEGG: bur:Bcep18194_A6175 cytochrome-c oxidase; cytochrome-c oxidase complement(2462374..2463981) Burkholderia cenocepacia AU 1054 4093639 YP_622107.1 CDS Bcen_2233 NC_008060.1 2464025 2465623 R PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; OmpA/MotB; cytochrome C oxidase subunit II, transmembrane region; KEGG: bur:Bcep18194_A6176 cytochrome c oxidase, subunit II; cytochrome c oxidase, subunit II complement(2464025..2465623) Burkholderia cenocepacia AU 1054 4093640 YP_622108.1 CDS Bcen_2234 NC_008060.1 2465680 2466204 R KEGG: bur:Bcep18194_A6177 integral membrane protein-like; integral membrane protein-like protein complement(2465680..2466204) Burkholderia cenocepacia AU 1054 4093641 YP_622109.1 CDS Bcen_2235 NC_008060.1 2466400 2467365 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A6178 methylase involved in ubiquinone/menaquinone biosynthesis-like; methyltransferase type 11 complement(2466400..2467365) Burkholderia cenocepacia AU 1054 4093642 YP_622110.1 CDS Bcen_2236 NC_008060.1 2467447 2468247 D PFAM: phosphoribosyltransferase; KEGG: bur:Bcep18194_A6179 phosphoribosyltransferase; phosphoribosyltransferase 2467447..2468247 Burkholderia cenocepacia AU 1054 4093643 YP_622111.1 CDS Bcen_2237 NC_008060.1 2468310 2468816 D TIGRFAM: RNA methyltransferase TrmH, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bur:Bcep18194_A6180 RNA methyltransferase TrmH, group 2; RNA methyl transferase TrmH 2468310..2468816 Burkholderia cenocepacia AU 1054 4093644 YP_622112.1 CDS Bcen_2238 NC_008060.1 2468848 2469372 R PFAM: Appr-1-p processing; KEGG: bur:Bcep18194_A6181 Appr-1-p processing enzyme family; Appr-1-p processing complement(2468848..2469372) Burkholderia cenocepacia AU 1054 4093645 YP_622113.1 CDS gpsA NC_008060.1 2469465 2470463 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(2469465..2470463) Burkholderia cenocepacia AU 1054 4093646 YP_622114.1 CDS Bcen_2240 NC_008060.1 2470490 2470984 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(2470490..2470984) Burkholderia cenocepacia AU 1054 4093647 YP_622115.1 CDS Bcen_2241 NC_008060.1 2471092 2471352 R TIGRFAM: Glutaredoxin, GrxC; PFAM: glutaredoxin; KEGG: bur:Bcep18194_A6184 glutaredoxin, GrxC; glutaredoxin GrxC complement(2471092..2471352) Burkholderia cenocepacia AU 1054 4093648 YP_622116.1 CDS Bcen_2242 NC_008060.1 2471349 2471771 R PFAM: Rhodanese-like; KEGG: bur:Bcep18194_A6185 rhodanese-like protein; rhodanese-like protein complement(2471349..2471771) Burkholderia cenocepacia AU 1054 4093649 YP_622117.1 CDS gpmA NC_008060.1 2471841 2472653 D 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 2471841..2472653 Burkholderia cenocepacia AU 1054 4093650 YP_622118.1 CDS Bcen_2244 NC_008060.1 2472910 2474457 D KEGG: bur:Bcep18194_A6187 peptidase S41A TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF; peptidase S41; carboxyl-terminal protease 2472910..2474457 Burkholderia cenocepacia AU 1054 4093651 YP_622119.1 CDS Bcen_2245 NC_008060.1 2474561 2475313 D PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: bur:Bcep18194_A6188 UBA/ThiF-type NAD/FAD binding fold, MoeZ/MoeB family protein; UBA/THIF-type NAD/FAD binding fold 2474561..2475313 Burkholderia cenocepacia AU 1054 4093652 YP_622120.1 CDS Bcen_2246 NC_008060.1 2475381 2477279 R TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; PEP-utilising enzyme-like; KEGG: bur:Bcep18194_A6189 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase complement(2475381..2477279) Burkholderia cenocepacia AU 1054 4093653 YP_622121.1 CDS Bcen_2247 NC_008060.1 2477355 2477624 R TIGRFAM: Phosphotransferase system, HPr; PFAM: phosphocarrier HPr protein; KEGG: bpm:BURPS1710b_0657 phosphocarrier protein HPr; phosphotransferase system, HPr complement(2477355..2477624) Burkholderia cenocepacia AU 1054 4093654 YP_622122.1 CDS Bcen_2248 NC_008060.1 2477699 2478169 R PFAM: PTS system fructose subfamily IIA component; KEGG: bur:Bcep18194_A6191 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA complement(2477699..2478169) Burkholderia cenocepacia AU 1054 4092990 YP_622123.1 CDS Bcen_2249 NC_008060.1 2478407 2479363 R catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase complement(2478407..2479363) Burkholderia cenocepacia AU 1054 4092991 YP_622124.1 CDS Bcen_2250 NC_008060.1 2479389 2480678 R TIGRFAM: Glutamate--cysteine ligase GshA; KEGG: bur:Bcep18194_A6193 glutamate--cysteine ligase GshA; glutamate--cysteine ligase GshA complement(2479389..2480678) Burkholderia cenocepacia AU 1054 4092992 YP_622125.1 CDS Bcen_2251 NC_008060.1 2480922 2482424 R TIGRFAM: ammonium transporter; PFAM: Rh-like protein/ammonium transporter; KEGG: bur:Bcep18194_A6194 ammonium transporter; ammonium transporter complement(2480922..2482424) Burkholderia cenocepacia AU 1054 4092993 YP_622126.1 CDS Bcen_2252 NC_008060.1 2482462 2482800 R PFAM: nitrogen regulatory protein P-II; KEGG: bur:Bcep18194_A6195 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II complement(2482462..2482800) Burkholderia cenocepacia AU 1054 4092994 YP_622127.1 CDS Bcen_2253 NC_008060.1 2483156 2483407 D PFAM: protein of unknown function DUF526; KEGG: bur:Bcep18194_A6196 protein of unknown function DUF526; hypothetical protein 2483156..2483407 Burkholderia cenocepacia AU 1054 4092995 YP_622128.1 CDS Bcen_2254 NC_008060.1 2483652 2485256 D KEGG: bte:BTH_I0405 Mg chelatase-related protein TIGRFAM: Mg chelatase-related protein; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; Mg chelatase-like protein 2483652..2485256 Burkholderia cenocepacia AU 1054 4092996 YP_622129.1 CDS Bcen_2255 NC_008060.1 2485590 2486192 R KEGG: bur:Bcep18194_A6211 hypothetical protein; hypothetical protein complement(2485590..2486192) Burkholderia cenocepacia AU 1054 4092997 YP_622130.1 CDS Bcen_2256 NC_008060.1 2486320 2486856 D PFAM: Redoxin; KEGG: bur:Bcep18194_A6212 thiol-disulfide isomerase/thioredoxin-like; redoxin 2486320..2486856 Burkholderia cenocepacia AU 1054 4092998 YP_622131.1 CDS Bcen_2257 NC_008060.1 2486960 2488312 R PFAM: response regulator receiver; sigma-54 factor, interaction region; helix-turn-helix, Fis-type; SMART: ATPase; KEGG: bur:Bcep18194_A6213 two component, sigma54 specific, transcriptional regulator, fis family; Fis family transcriptional regulator complement(2486960..2488312) Burkholderia cenocepacia AU 1054 4092999 YP_622132.1 CDS Bcen_2258 NC_008060.1 2488400 2490409 R PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; KEGG: bur:Bcep18194_A6214 histidine kinase; sensor signal transduction histidine kinase complement(2488400..2490409) Burkholderia cenocepacia AU 1054 4093000 YP_622133.1 CDS Bcen_2259 NC_008060.1 2490414 2491706 R involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA complement(2490414..2491706) Burkholderia cenocepacia AU 1054 4093001 YP_622134.1 CDS actP NC_008060.1 2492063 2493748 R member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease complement(2492063..2493748) Burkholderia cenocepacia AU 1054 4093002 YP_622135.1 CDS Bcen_2261 NC_008060.1 2493760 2494065 R PFAM: protein of unknown function DUF485; KEGG: bur:Bcep18194_A6217 protein of unknown function DUF485; hypothetical protein complement(2493760..2494065) Burkholderia cenocepacia AU 1054 4093003 YP_622136.1 CDS Bcen_2262 NC_008060.1 2494161 2495366 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A6218 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2494161..2495366) Burkholderia cenocepacia AU 1054 4093004 YP_622137.1 CDS Bcen_2263 NC_008060.1 2495397 2496542 R PFAM: acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_A6219 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase complement(2495397..2496542) Burkholderia cenocepacia AU 1054 4093005 YP_622138.1 CDS Bcen_2264 NC_008060.1 2496557 2497765 R PFAM: acyl-CoA dehydrogenase-like; KEGG: bpm:BURPS1710b_0634 hypothetical protein; acyl-CoA dehydrogenase complement(2496557..2497765) Burkholderia cenocepacia AU 1054 4093006 YP_622139.1 CDS Bcen_2265 NC_008060.1 2497804 2499930 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase-like; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A6221 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase complement(2497804..2499930) Burkholderia cenocepacia AU 1054 4093007 YP_622140.1 CDS Bcen_2266 NC_008060.1 2500109 2501071 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A6222 transcriptional regulator, LysR family; LysR family transcriptional regulator 2500109..2501071 Burkholderia cenocepacia AU 1054 4093008 YP_622141.1 CDS Bcen_2267 NC_008060.1 2501173 2503047 D PFAM: gamma-glutamyltranspeptidase; KEGG: bur:Bcep18194_A6223 gamma-glutamyltransferase; gamma-glutamyltransferase 2501173..2503047 Burkholderia cenocepacia AU 1054 4093009 YP_622142.1 CDS Bcen_2268 NC_008060.1 2503448 2505241 D PFAM: YadA-like-like; Haemagluttinin motif; Hep_Hag; KEGG: bur:Bcep18194_B0323 YadA-like haemagluttinin; YadA-like 2503448..2505241 Burkholderia cenocepacia AU 1054 4093010 YP_622143.1 CDS Bcen_2269 NC_008060.1 2505361 2506326 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A6225 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2505361..2506326) Burkholderia cenocepacia AU 1054 4093011 YP_622144.1 CDS Bcen_2270 NC_008060.1 2506326 2507123 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A6226 ABC taurine transporter, ATPase subunit; ABC transporter complement(2506326..2507123) Burkholderia cenocepacia AU 1054 4093012 YP_622145.1 CDS Bcen_2271 NC_008060.1 2507164 2508180 R KEGG: bur:Bcep18194_A6227 ABC taurine transporter, periplasmic ligand binding protein TIGRFAM: Taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; taurine ABC transporter, periplasmic binding protein complement(2507164..2508180) Burkholderia cenocepacia AU 1054 4093013 YP_622146.1 CDS Bcen_2272 NC_008060.1 2508441 2509433 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(2508441..2509433) Burkholderia cenocepacia AU 1054 4093014 YP_622147.1 CDS lipB NC_008060.1 2509426 2510181 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(2509426..2510181) Burkholderia cenocepacia AU 1054 4093015 YP_622148.1 CDS Bcen_2274 NC_008060.1 2510266 2510592 R KEGG: bur:Bcep18194_A6232 hypothetical protein; hypothetical protein complement(2510266..2510592) Burkholderia cenocepacia AU 1054 4093016 YP_622149.1 CDS Bcen_2275 NC_008060.1 2510695 2511684 D Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 2510695..2511684 Burkholderia cenocepacia AU 1054 4093017 YP_622150.1 CDS Bcen_2276 NC_008060.1 2511707 2512015 R PFAM: protein of unknown function DUF493; KEGG: bur:Bcep18194_A6234 protein of unknown function DUF493; hypothetical protein complement(2511707..2512015) Burkholderia cenocepacia AU 1054 4093018 YP_622151.1 CDS Bcen_2277 NC_008060.1 2512015 2512941 R PFAM: aminotransferase, class IV; KEGG: bur:Bcep18194_A6235 aminotransferase, class IV; aminotransferase, class IV complement(2512015..2512941) Burkholderia cenocepacia AU 1054 4093019 YP_622152.1 CDS Bcen_2278 NC_008060.1 2512990 2514579 R PFAM: beta-lactamase; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5-like; KEGG: bur:Bcep18194_A6236 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase complement(2512990..2514579) Burkholderia cenocepacia AU 1054 4093020 YP_622153.1 CDS Bcen_2279 NC_008060.1 2514942 2516045 D PFAM: transposase, IS4; KEGG: gsu:GSU2597 ISGsu2, transposase; transposase, IS4 2514942..2516045 Burkholderia cenocepacia AU 1054 4093021 YP_622154.1 CDS Bcen_2280 NC_008060.1 2516205 2516849 R KEGG: bur:Bcep18194_A6237 hydrolase of the alpha/beta superfamily-like; alpha/beta fold family hydrolase-like protein complement(2516205..2516849) Burkholderia cenocepacia AU 1054 4093022 YP_622155.1 CDS Bcen_2281 NC_008060.1 2516863 2517180 R KEGG: bur:Bcep18194_A6238 ferredoxin-like; ferredoxin-like protein complement(2516863..2517180) Burkholderia cenocepacia AU 1054 4093023 YP_622156.1 CDS Bcen_2282 NC_008060.1 2517335 2518486 R KEGG: bur:Bcep18194_A6239 VanZ like protein; VirB8 protein complement(2517335..2518486) Burkholderia cenocepacia AU 1054 4093024 YP_622157.1 CDS Bcen_2283 NC_008060.1 2518518 2519141 R KEGG: bur:Bcep18194_A6240 ABC-type uncharacterized transport system auxiliary component-like; ABC transporter auxiliary component-like complement(2518518..2519141) Burkholderia cenocepacia AU 1054 4093025 YP_622158.1 CDS Bcen_2284 NC_008060.1 2519271 2520200 R PFAM: Mammalian cell entry related; KEGG: bur:Bcep18194_A6241 ABC transporter, periplasmic ligand binding protein; hypothetical protein complement(2519271..2520200) Burkholderia cenocepacia AU 1054 4093026 YP_622159.1 CDS Bcen_2285 NC_008060.1 2520218 2521132 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A6242 ABC transporter, ATPase subunit; ABC transporter related complement(2520218..2521132) Burkholderia cenocepacia AU 1054 4093027 YP_622160.1 CDS Bcen_2286 NC_008060.1 2521129 2522406 R PFAM: protein of unknown function DUF140; KEGG: bur:Bcep18194_A6243 ABC transporter, inner membrane subunit; hypothetical protein complement(2521129..2522406) Burkholderia cenocepacia AU 1054 4093028 YP_622161.1 CDS Bcen_2287 NC_008060.1 2522555 2524624 D PFAM: metallophosphoesterase; 5'-Nucleotidase-like; KEGG: bur:Bcep18194_A6244 5'-Nucleotidase-like; 5'-nucleotidase-like 2522555..2524624 Burkholderia cenocepacia AU 1054 4092513 YP_622162.1 CDS Bcen_2288 NC_008060.1 2524621 2525478 D PFAM: Sel1-like repeat; KEGG: bur:Bcep18194_A6245 Sel1-like repeat protein; Sel1 repeat-containing protein 2524621..2525478 Burkholderia cenocepacia AU 1054 4092514 YP_622163.1 CDS Bcen_2289 NC_008060.1 2525528 2525671 D KEGG: bur:Bcep18194_A6246 hypothetical protein; hypothetical protein 2525528..2525671 Burkholderia cenocepacia AU 1054 4092515 YP_622164.1 CDS Bcen_2290 NC_008060.1 2525762 2526682 D catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 2525762..2526682 Burkholderia cenocepacia AU 1054 4092516 YP_622165.1 CDS Bcen_2291 NC_008060.1 2526679 2527476 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 2526679..2527476 Burkholderia cenocepacia AU 1054 4092517 YP_622166.1 CDS Bcen_2292 NC_008060.1 2527670 2527912 D KEGG: bur:Bcep18194_A6249 hypothetical protein; hypothetical protein 2527670..2527912 Burkholderia cenocepacia AU 1054 4092518 YP_622167.1 CDS Bcen_2293 NC_008060.1 2527929 2528414 R TIGRFAM: Cytidyltransferase-related; RfaE bifunctional protein, domain II; PFAM: cytidylyltransferase; KEGG: bur:Bcep18194_A6250 ADP-heptose synthase bifunctional sugarkinase/adenylyltransferase; bifunctional ADP-heptose synthase complement(2527929..2528414) Burkholderia cenocepacia AU 1054 4092519 YP_622168.1 CDS Bcen_2294 NC_008060.1 2528576 2529454 R KEGG: bur:Bcep18194_A6251 hypothetical protein; hypothetical protein complement(2528576..2529454) Burkholderia cenocepacia AU 1054 4092520 YP_622169.1 CDS Bcen_2295 NC_008060.1 2529921 2531147 R PFAM: Patatin; KEGG: bur:Bcep18194_A6252 patatin; patatin complement(2529921..2531147) Burkholderia cenocepacia AU 1054 4092521 YP_622170.1 CDS Bcen_2296 NC_008060.1 2531172 2531909 R KEGG: bur:Bcep18194_A6253 hypothetical protein; hypothetical protein complement(2531172..2531909) Burkholderia cenocepacia AU 1054 4092522 YP_622171.1 CDS Bcen_2297 NC_008060.1 2531991 2532818 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(2531991..2532818) Burkholderia cenocepacia AU 1054 4092523 YP_622172.1 CDS Bcen_2298 NC_008060.1 2532949 2533941 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_A6255 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase complement(2532949..2533941) Burkholderia cenocepacia AU 1054 4092524 YP_622173.1 CDS Bcen_2299 NC_008060.1 2534071 2534937 D PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_A6256 transcriptional regulator, IclR family; IclR family transcriptional regulator 2534071..2534937 Burkholderia cenocepacia AU 1054 4092525 YP_622174.1 CDS Bcen_2300 NC_008060.1 2534996 2536303 D KEGG: bur:Bcep18194_A6257 hypothetical protein; hypothetical protein 2534996..2536303 Burkholderia cenocepacia AU 1054 4092526 YP_622175.1 CDS Bcen_2301 NC_008060.1 2536557 2536814 D KEGG: bur:Bcep18194_A6258 hypothetical protein; hypothetical protein 2536557..2536814 Burkholderia cenocepacia AU 1054 4092527 YP_622176.1 CDS Bcen_2302 NC_008060.1 2537016 2538083 D PFAM: homocysteine S-methyltransferase; KEGG: bur:Bcep18194_A6259 5-methyltetrahydrofolate--homocysteine S-methyltransferase; 5-methyltetrahydrofolate--homocysteine methyltransferase 2537016..2538083 Burkholderia cenocepacia AU 1054 4092528 YP_622177.1 CDS Bcen_2303 NC_008060.1 2538126 2540843 D KEGG: bur:Bcep18194_A6260 5-methyltetrahydrofolate--homocysteine methyltransferase TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: dihydropteroate synthase, DHPS; Methionine synthase, B12-binding module, cap; Vitamin B12 dependent methionine synthase, activation region; cobalamin B12-binding; 5-methyltetrahydrofolate--homocysteine methyltransferase 2538126..2540843 Burkholderia cenocepacia AU 1054 4092529 YP_622178.1 CDS Bcen_2304 NC_008060.1 2540962 2541285 R KEGG: bur:Bcep18194_A6261 hypothetical protein; hypothetical protein complement(2540962..2541285) Burkholderia cenocepacia AU 1054 4092530 YP_622179.1 CDS argS NC_008060.1 2541486 2543267 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2541486..2543267 Burkholderia cenocepacia AU 1054 4092531 YP_622180.1 CDS Bcen_2306 NC_008060.1 2543401 2544294 D PFAM: Sporulation related; KEGG: bur:Bcep18194_A6263 cell division protein; sporulation related 2543401..2544294 Burkholderia cenocepacia AU 1054 4092532 YP_622181.1 CDS Bcen_2307 NC_008060.1 2544365 2545003 D PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_A6264 DsbA oxidoreductase; DSBA oxidoreductase 2544365..2545003 Burkholderia cenocepacia AU 1054 4092533 YP_622182.1 CDS Bcen_2308 NC_008060.1 2545023 2545796 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A6265 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2545023..2545796 Burkholderia cenocepacia AU 1054 4092534 YP_622183.1 CDS Bcen_2309 NC_008060.1 2546235 2547839 D PFAM: extracellular solute-binding protein, family 5; KEGG: bur:Bcep18194_A6266 ABC peptide transporter, periplasmic ligand binding protein; extracellular solute-binding protein 2546235..2547839 Burkholderia cenocepacia AU 1054 4092535 YP_622184.1 CDS Bcen_2310 NC_008060.1 2548032 2549687 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A6267 ABC transporter, fused ATPase subunits; ABC transporter 2548032..2549687 Burkholderia cenocepacia AU 1054 4092536 YP_622185.1 CDS Bcen_2311 NC_008060.1 2549704 2550783 R PFAM: beta-lactamase-like; KEGG: bur:Bcep18194_A6268 beta-lactamase-like; beta-lactamase-like protein complement(2549704..2550783) Burkholderia cenocepacia AU 1054 4092537 YP_622186.1 CDS aceK NC_008060.1 2551085 2552902 D catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 2551085..2552902 Burkholderia cenocepacia AU 1054 4092538 YP_622187.1 CDS Bcen_2313 NC_008060.1 2552960 2553727 D PFAM: carbonic anhydrase; KEGG: bur:Bcep18194_A6270 carbonate dehydratase; carbonate dehydratase 2552960..2553727 Burkholderia cenocepacia AU 1054 4092539 YP_622188.1 CDS Bcen_2314 NC_008060.1 2553840 2554517 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A6271 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2553840..2554517 Burkholderia cenocepacia AU 1054 4092540 YP_622189.1 CDS Bcen_2315 NC_008060.1 2554560 2554994 D KEGG: bur:Bcep18194_A6272 hypothetical protein; hypothetical protein 2554560..2554994 Burkholderia cenocepacia AU 1054 4092541 YP_622190.1 CDS Bcen_2316 NC_008060.1 2555101 2556372 D KEGG: bur:Bcep18194_A6273 dienelactone hydrolase and related enzymes-like; dienelactone hydrolase and related enzymes-like 2555101..2556372 Burkholderia cenocepacia AU 1054 4092542 YP_622191.1 CDS Bcen_2317 NC_008060.1 2556855 2558234 D catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2556855..2558234 Burkholderia cenocepacia AU 1054 4092543 YP_622192.1 CDS Bcen_2318 NC_008060.1 2558231 2559451 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 2558231..2559451 Burkholderia cenocepacia AU 1054 4092544 YP_622193.1 CDS bioD NC_008060.1 2559448 2560167 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2559448..2560167 Burkholderia cenocepacia AU 1054 4092545 YP_622194.1 CDS Bcen_2320 NC_008060.1 2560209 2561228 D KEGG: bur:Bcep18194_A6278 biotin synthase TIGRFAM: biotin synthase; PFAM: Radical SAM; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2560209..2561228 Burkholderia cenocepacia AU 1054 4092546 YP_622195.1 CDS Bcen_2321 NC_008060.1 2561378 2562103 R PFAM: CutC; KEGG: bur:Bcep18194_A6287 CutC family protein; CutC protein complement(2561378..2562103) Burkholderia cenocepacia AU 1054 4092547 YP_622196.1 CDS Bcen_2322 NC_008060.1 2562226 2562630 R KEGG: bur:Bcep18194_A6288 hypothetical protein; hypothetical protein complement(2562226..2562630) Burkholderia cenocepacia AU 1054 4092548 YP_622197.1 CDS Bcen_2323 NC_008060.1 2562638 2563024 R KEGG: bur:Bcep18194_A6289 hypothetical protein; hypothetical protein complement(2562638..2563024) Burkholderia cenocepacia AU 1054 4092549 YP_622198.1 CDS Bcen_2324 NC_008060.1 2563182 2564468 R PFAM: EAL; KEGG: bur:Bcep18194_A6290 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase complement(2563182..2564468) Burkholderia cenocepacia AU 1054 4092550 YP_622199.1 CDS Bcen_2325 NC_008060.1 2564541 2566442 D TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bur:Bcep18194_A6291 Na+/H+ antiporter; Na+/H+ antiporter 2564541..2566442 Burkholderia cenocepacia AU 1054 4092551 YP_622200.1 CDS Bcen_2326 NC_008060.1 2566538 2570110 R catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoacid ferredoxin oxidoreductase complement(2566538..2570110) Burkholderia cenocepacia AU 1054 4091605 YP_622201.1 CDS Bcen_2327 NC_008060.1 2571082 2571384 D hypothetical protein 2571082..2571384 Burkholderia cenocepacia AU 1054 4091606 YP_622202.1 CDS Bcen_2328 NC_008060.1 2571983 2572540 R PFAM: transferase hexapeptide repeat; KEGG: bur:Bcep18194_A6294 acetyltransferase (isoleucine patch superfamily); hexapaptide repeat-containing transferase complement(2571983..2572540) Burkholderia cenocepacia AU 1054 4091607 YP_622203.1 CDS Bcen_2329 NC_008060.1 2572933 2573547 D PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_A6295 glutathione S-transferase-like; glutathione S-transferase 2572933..2573547 Burkholderia cenocepacia AU 1054 4091608 YP_622204.1 CDS Bcen_2330 NC_008060.1 2573580 2574548 R PFAM: Ion transport 2; K+ channel, inward rectifier, conserved region 2; KEGG: bur:Bcep18194_A6296 K+ channel, inward rectifier; K+ channel, inward rectifier, region 2 complement(2573580..2574548) Burkholderia cenocepacia AU 1054 4091609 YP_622205.1 CDS Bcen_2331 NC_008060.1 2574713 2575732 R TIGRFAM: Thiosulphate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_A6297 ABC thiosulphate transporter, periplasmic ligand binding protein; thiosulfate-binding protein complement(2574713..2575732) Burkholderia cenocepacia AU 1054 4091610 YP_622206.1 CDS Bcen_2332 NC_008060.1 2576184 2577077 D TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_A6298 dihydrodipicolinate synthase subfamily; dihydrodipicolinate synthase 2576184..2577077 Burkholderia cenocepacia AU 1054 4091611 YP_622207.1 CDS Bcen_2333 NC_008060.1 2577099 2577479 R PFAM: PilT protein-like; KEGG: bur:Bcep18194_A6299 PilT protein-like; PilT protein-like protein complement(2577099..2577479) Burkholderia cenocepacia AU 1054 4091612 YP_622208.1 CDS Bcen_2334 NC_008060.1 2577479 2577718 R TIGRFAM: Prevent-host-death protein; KEGG: bur:Bcep18194_A6300 hypothetical protein; prevent-host-death protein complement(2577479..2577718) Burkholderia cenocepacia AU 1054 4091613 YP_622209.1 CDS Bcen_2335 NC_008060.1 2577812 2578861 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A6301 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2577812..2578861) Burkholderia cenocepacia AU 1054 4091614 YP_622210.1 CDS Bcen_2336 NC_008060.1 2578968 2580251 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A6302 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 2578968..2580251 Burkholderia cenocepacia AU 1054 4091615 YP_622211.1 CDS Bcen_2337 NC_008060.1 2580328 2580966 R PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_A6303 glutathione S-transferase-like; glutathione S-transferase-like complement(2580328..2580966) Burkholderia cenocepacia AU 1054 4091616 YP_622212.1 CDS Bcen_2338 NC_008060.1 2581078 2581998 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A6304 transcriptional regulator, LysR family; LysR family transcriptional regulator 2581078..2581998 Burkholderia cenocepacia AU 1054 4091617 YP_622213.1 CDS Bcen_2339 NC_008060.1 2582020 2584245 R PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: reu:Reut_B4507 aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead:aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(2582020..2584245) Burkholderia cenocepacia AU 1054 4091618 YP_622214.1 CDS Bcen_2340 NC_008060.1 2584242 2585243 R PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein-like; KEGG: reu:Reut_B4506 molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein, C-terminal; molybdopterin dehydrogenase complement(2584242..2585243) Burkholderia cenocepacia AU 1054 4091619 YP_622215.1 CDS Bcen_2341 NC_008060.1 2585262 2586020 R PFAM: ferredoxin; [2Fe-2S]-binding; KEGG: reu:Reut_B4505 twin-arginine translocation pathway signal; (2Fe-2S)-binding protein complement(2585262..2586020) Burkholderia cenocepacia AU 1054 4091620 YP_622216.1 CDS Bcen_2342 NC_008060.1 2586424 2586858 D KEGG: bur:Bcep18194_A6305 hypothetical protein; hypothetical protein 2586424..2586858 Burkholderia cenocepacia AU 1054 4091621 YP_622217.1 CDS Bcen_2343 NC_008060.1 2587123 2587746 R PFAM: protein of unknown function DUF1234; KEGG: bur:Bcep18194_A6307 protein of unknown function DUF1234; hypothetical protein complement(2587123..2587746) Burkholderia cenocepacia AU 1054 4091622 YP_622218.1 CDS Bcen_2344 NC_008060.1 2588082 2589023 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A6308 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 2588082..2589023 Burkholderia cenocepacia AU 1054 4091623 YP_622219.1 CDS Bcen_2345 NC_008060.1 2589053 2589985 D catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase 2589053..2589985 Burkholderia cenocepacia AU 1054 4091624 YP_622220.1 CDS Bcen_2346 NC_008060.1 2590012 2590518 D PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bur:Bcep18194_A6310 YbaK/prolyl-tRNA synthetase like protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 2590012..2590518 Burkholderia cenocepacia AU 1054 4091625 YP_622221.1 CDS Bcen_2347 NC_008060.1 2590515 2590721 D PFAM: protein of unknown function DUF1289; KEGG: bur:Bcep18194_A6311 protein of unknown function DUF1289; hypothetical protein 2590515..2590721 Burkholderia cenocepacia AU 1054 4091626 YP_622222.1 CDS Bcen_2348 NC_008060.1 2590976 2591878 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_A6312 protein of unknown function DUF6, transmembrane; hypothetical protein complement(2590976..2591878) Burkholderia cenocepacia AU 1054 4091627 YP_622223.1 CDS Bcen_2349 NC_008060.1 2591991 2592482 D PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_A6313 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2591991..2592482 Burkholderia cenocepacia AU 1054 4091628 YP_622224.1 CDS Bcen_2350 NC_008060.1 2592547 2593443 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A6314 alpha/beta hydrolase; alpha/beta hydrolase complement(2592547..2593443) Burkholderia cenocepacia AU 1054 4091629 YP_622225.1 CDS Bcen_2351 NC_008060.1 2593692 2594651 D PFAM: 2-nitropropane dioxygenase, NPD; KEGG: bur:Bcep18194_A6315 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 2593692..2594651 Burkholderia cenocepacia AU 1054 4091630 YP_622226.1 CDS Bcen_2353 NC_008060.1 2596135 2597097 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A6316 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2596135..2597097) Burkholderia cenocepacia AU 1054 4091632 YP_622227.1 CDS Bcen_2354 NC_008060.1 2597294 2598370 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_A6317 outer membrane protein, (porin); porin complement(2597294..2598370) Burkholderia cenocepacia AU 1054 4091633 YP_622228.1 CDS Bcen_2355 NC_008060.1 2598716 2599207 R KEGG: bur:Bcep18194_A6318 hypothetical protein; hypothetical protein complement(2598716..2599207) Burkholderia cenocepacia AU 1054 4091634 YP_622229.1 CDS Bcen_2356 NC_008060.1 2599554 2600585 D PFAM: Bile acid:sodium symporter; KEGG: bur:Bcep18194_A6319 bile acid/sodium symporter; bile acid:sodium symporter 2599554..2600585 Burkholderia cenocepacia AU 1054 4091635 YP_622230.1 CDS Bcen_2357 NC_008060.1 2600820 2602661 D PFAM: GGDEF; EAL; KEGG: bur:Bcep18194_A6320 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 2600820..2602661 Burkholderia cenocepacia AU 1054 4091636 YP_622231.1 CDS Bcen_2358 NC_008060.1 2603048 2604067 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A6321 transcriptional regulator, LacI family; LacI family transcriptional regulator 2603048..2604067 Burkholderia cenocepacia AU 1054 4091637 YP_622232.1 CDS Bcen_2359 NC_008060.1 2604314 2605345 D PFAM: N-acylglucosamine 2-epimerase; KEGG: bur:Bcep18194_A6322 N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase 2604314..2605345 Burkholderia cenocepacia AU 1054 4091638 YP_622233.1 CDS Bcen_2360 NC_008060.1 2605342 2606250 D PFAM: PfkB; KEGG: bur:Bcep18194_A6323 sugar kinase, ribokinase family; PfkB protein 2605342..2606250 Burkholderia cenocepacia AU 1054 4091639 YP_622234.1 CDS Bcen_2361 NC_008060.1 2606374 2606595 D KEGG: bur:Bcep18194_A6324 hypothetical protein; hypothetical protein 2606374..2606595 Burkholderia cenocepacia AU 1054 4091640 YP_622235.1 CDS Bcen_2362 NC_008060.1 2606645 2606839 R KEGG: bur:Bcep18194_A6325 hypothetical protein; hypothetical protein complement(2606645..2606839) Burkholderia cenocepacia AU 1054 4091641 YP_622236.1 CDS Bcen_2363 NC_008060.1 2606872 2608062 R PFAM: protein of unknown function DUF185; KEGG: bur:Bcep18194_A6326 protein of unknown function DUF185; hypothetical protein complement(2606872..2608062) Burkholderia cenocepacia AU 1054 4091642 YP_622237.1 CDS Bcen_2364 NC_008060.1 2608076 2608879 D KEGG: bur:Bcep18194_A6327 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2608076..2608879 Burkholderia cenocepacia AU 1054 4091643 YP_622238.1 CDS Bcen_2365 NC_008060.1 2608891 2609295 D TIGRFAM: Dihydroneopterin aldolase; KEGG: bur:Bcep18194_A6328 dihydroneopterin aldolase; dihydroneopterin aldolase 2608891..2609295 Burkholderia cenocepacia AU 1054 4092951 YP_622239.1 CDS Bcen_2366 NC_008060.1 2609308 2610288 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2609308..2610288 Burkholderia cenocepacia AU 1054 4092952 YP_622240.1 CDS Bcen_2367 NC_008060.1 2610423 2611784 D TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat; Nucleotidyl transferase; KEGG: bur:Bcep18194_A6330 UDP-N-acetylglucosamine pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase 2610423..2611784 Burkholderia cenocepacia AU 1054 4092953 YP_622241.1 CDS Bcen_2368 NC_008060.1 2611839 2613656 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 2611839..2613656 Burkholderia cenocepacia AU 1054 4092954 YP_622242.1 CDS Bcen_2369 NC_008060.1 2613787 2614152 D PFAM: protein of unknown function DUF1044; KEGG: bur:Bcep18194_A6332 protein of unknown function DUF1044; hypothetical protein 2613787..2614152 Burkholderia cenocepacia AU 1054 4092955 YP_622243.1 CDS Bcen_2370 NC_008060.1 2614145 2614465 D KEGG: bur:Bcep18194_A6333 transcriptional regulator; transcriptional regulator 2614145..2614465 Burkholderia cenocepacia AU 1054 4092956 YP_622244.1 CDS Bcen_2371 NC_008060.1 2614534 2615001 D KEGG: bur:Bcep18194_A6334 hypothetical protein; hypothetical protein 2614534..2615001 Burkholderia cenocepacia AU 1054 4092957 YP_622245.1 CDS Bcen_2372 NC_008060.1 2615001 2615219 D KEGG: bur:Bcep18194_A6335 hypothetical protein; hypothetical protein 2615001..2615219 Burkholderia cenocepacia AU 1054 4092958 YP_622246.1 CDS Bcen_2373 NC_008060.1 2615314 2616150 R PFAM: iron permease FTR1; KEGG: bur:Bcep18194_A6336 iron permease FTR1; iron permease FTR1 complement(2615314..2616150) Burkholderia cenocepacia AU 1054 4092959 YP_622247.1 CDS Bcen_2374 NC_008060.1 2616163 2616558 R KEGG: bur:Bcep18194_A6337 hypothetical protein; hypothetical protein complement(2616163..2616558) Burkholderia cenocepacia AU 1054 4092960 YP_622248.1 CDS Bcen_2375 NC_008060.1 2616836 2617036 D PFAM: Heavy metal transport/detoxification protein; KEGG: bur:Bcep18194_A6338 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 2616836..2617036 Burkholderia cenocepacia AU 1054 4092961 YP_622249.1 CDS Bcen_2376 NC_008060.1 2617102 2618592 R PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_A6339 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase complement(2617102..2618592) Burkholderia cenocepacia AU 1054 4092962 YP_622250.1 CDS Bcen_2377 NC_008060.1 2618681 2619232 R PFAM: helix-turn-helix motif; Cupin 2, conserved barrel; KEGG: bur:Bcep18194_A6340 transcriptional regulator, XRE family with cupin sensor domain; XRE family transcriptional regulator complement(2618681..2619232) Burkholderia cenocepacia AU 1054 4092963 YP_622251.1 CDS Bcen_2378 NC_008060.1 2619570 2619869 D KEGG: bur:Bcep18194_A6341 hypothetical protein; hypothetical protein 2619570..2619869 Burkholderia cenocepacia AU 1054 4092964 YP_622252.1 CDS Bcen_2379 NC_008060.1 2620151 2620936 D PFAM: peptidase C26; KEGG: bur:Bcep18194_A6342 peptidase C26; peptidase C26 2620151..2620936 Burkholderia cenocepacia AU 1054 4092965 YP_622253.1 CDS Bcen_2380 NC_008060.1 2620965 2622302 D PFAM: glutamine synthetase, catalytic region; KEGG: bur:Bcep18194_A6343 glutamate--ammonia ligase; glutamate--ammonia ligase 2620965..2622302 Burkholderia cenocepacia AU 1054 4092966 YP_622254.1 CDS Bcen_2381 NC_008060.1 2622337 2623779 D PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_A6344 aminotransferase class-III; aminotransferase 2622337..2623779 Burkholderia cenocepacia AU 1054 4092967 YP_622255.1 CDS Bcen_2382 NC_008060.1 2623842 2624957 D PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_A6345 ABC spermidine/putrescine transporter, periplasmic ligand binding protein; extracellular solute-binding protein 2623842..2624957 Burkholderia cenocepacia AU 1054 4092968 YP_622256.1 CDS Bcen_2383 NC_008060.1 2625146 2626300 D KEGG: bur:Bcep18194_A6346 spermidine/putrescine ABC transporter, ATPase subunit TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB; SMART: ATPase; spermidine/putrescine ABC transporter ATP-binding subunit 2625146..2626300 Burkholderia cenocepacia AU 1054 4092969 YP_622257.1 CDS Bcen_2384 NC_008060.1 2626311 2627297 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2812 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 2626311..2627297 Burkholderia cenocepacia AU 1054 4092970 YP_622258.1 CDS Bcen_2385 NC_008060.1 2627294 2628133 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2811 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 2627294..2628133 Burkholderia cenocepacia AU 1054 4092971 YP_622259.1 CDS Bcen_2386 NC_008060.1 2628250 2629842 D KEGG: bur:Bcep18194_A6349 hypothetical protein; hypothetical protein 2628250..2629842 Burkholderia cenocepacia AU 1054 4092972 YP_622260.1 CDS Bcen_2387 NC_008060.1 2629941 2631245 D PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A6350 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2629941..2631245 Burkholderia cenocepacia AU 1054 4092973 YP_622261.1 CDS Bcen_2389 NC_008060.1 2632665 2633339 R PFAM: protein of unknown function DUF799; KEGG: bpm:BURPS1710b_0107 lipoprotein; hypothetical protein complement(2632665..2633339) Burkholderia cenocepacia AU 1054 4092975 YP_622262.1 CDS Bcen_2390 NC_008060.1 2633350 2633838 R KEGG: bpm:BURPS1710b_0108 hypothetical protein; hypothetical protein complement(2633350..2633838) Burkholderia cenocepacia AU 1054 4092976 YP_622263.1 CDS Bcen_2391 NC_008060.1 2633839 2634600 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Curli production assembly/transport component CsgG; KEGG: bps:BPSL3336 lipoprotein; twin-arginine translocation pathway signal complement(2633839..2634600) Burkholderia cenocepacia AU 1054 4092977 YP_622264.1 CDS Bcen_2392 NC_008060.1 2635052 2636407 R TIGRFAM: Glutathione reductase, plant; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bur:Bcep18194_A6352 glutathione reductase; glutathione reductase complement(2635052..2636407) Burkholderia cenocepacia AU 1054 4092978 YP_622265.1 CDS Bcen_2393 NC_008060.1 2636648 2636872 R KEGG: bur:Bcep18194_A6353 hypothetical protein; hypothetical protein complement(2636648..2636872) Burkholderia cenocepacia AU 1054 4092979 YP_622266.1 CDS Bcen_2394 NC_008060.1 2637259 2638380 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_A6354 outer membrane protein, (porin); porin complement(2637259..2638380) Burkholderia cenocepacia AU 1054 4092980 YP_622267.1 CDS Bcen_2395 NC_008060.1 2638825 2639571 R PFAM: protein of unknown function DUF1275; KEGG: bur:Bcep18194_A6355 protein of unknown function DUF1275; hypothetical protein complement(2638825..2639571) Burkholderia cenocepacia AU 1054 4092981 YP_622268.1 CDS Bcen_2396 NC_008060.1 2639630 2640157 R PFAM: Chromate transporter; KEGG: bur:Bcep18194_A6356 chromate transporter; chromate transporter complement(2639630..2640157) Burkholderia cenocepacia AU 1054 4092982 YP_622269.1 CDS Bcen_2397 NC_008060.1 2640154 2640834 R PFAM: Chromate transporter; KEGG: bur:Bcep18194_A6357 chromate transporter; chromate transporter complement(2640154..2640834) Burkholderia cenocepacia AU 1054 4092983 YP_622270.1 CDS Bcen_2398 NC_008060.1 2640930 2641814 D Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 2640930..2641814 Burkholderia cenocepacia AU 1054 4092984 YP_622271.1 CDS Bcen_2399 NC_008060.1 2641873 2643180 R TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_A6359 xanthine/uracil tranporter; uracil-xanthine permease complement(2641873..2643180) Burkholderia cenocepacia AU 1054 4092985 YP_622272.1 CDS flgL NC_008060.1 2643446 2644681 R with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL complement(2643446..2644681) Burkholderia cenocepacia AU 1054 4092986 YP_622273.1 CDS flgK NC_008060.1 2644696 2646627 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(2644696..2646627) Burkholderia cenocepacia AU 1054 4092987 YP_622274.1 CDS Bcen_2402 NC_008060.1 2646821 2647576 R PFAM: type IV pilus assembly PilZ; YcgR; KEGG: bur:Bcep18194_A6362 YcgR family protein; hypothetical protein complement(2646821..2647576) Burkholderia cenocepacia AU 1054 4092988 YP_622275.1 CDS flgJ NC_008060.1 2647797 2648789 R Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ complement(2647797..2648789) Burkholderia cenocepacia AU 1054 4092989 YP_622276.1 CDS flgI NC_008060.1 2648790 2649965 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein complement(2648790..2649965) Burkholderia cenocepacia AU 1054 4091354 YP_622277.1 CDS flgH NC_008060.1 2649971 2650660 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Burkholderia thailandensis has 2 copies of this and other flagella genes; flagellar basal body L-ring protein complement(2649971..2650660) Burkholderia cenocepacia AU 1054 4091355 YP_622278.1 CDS flgG NC_008060.1 2650682 2651470 R makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG complement(2650682..2651470) Burkholderia cenocepacia AU 1054 4091356 YP_622279.1 CDS flgF NC_008060.1 2651505 2652263 R FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF complement(2651505..2652263) Burkholderia cenocepacia AU 1054 4091357 YP_622280.1 CDS flgE NC_008060.1 2652283 2653524 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(2652283..2653524) Burkholderia cenocepacia AU 1054 4091358 YP_622281.1 CDS flgD NC_008060.1 2653552 2654298 R acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein complement(2653552..2654298) Burkholderia cenocepacia AU 1054 4091359 YP_622282.1 CDS flgC NC_008060.1 2654358 2654783 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(2654358..2654783) Burkholderia cenocepacia AU 1054 4091360 YP_622283.1 CDS flgB NC_008060.1 2654824 2655312 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB complement(2654824..2655312) Burkholderia cenocepacia AU 1054 4091361 YP_622284.2 CDS flgA NC_008060.1 2655802 2656734 D required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 2655802..2656734 Burkholderia cenocepacia AU 1054 4091362 YP_622285.1 CDS Bcen_2413 NC_008060.1 2656852 2657181 D KEGG: bur:Bcep18194_A6373 anti-sigma-28 factor, FlgM; anti-sigma-28 factor, FlgM 2656852..2657181 Burkholderia cenocepacia AU 1054 4091363 YP_622286.1 CDS Bcen_2414 NC_008060.1 2657258 2657698 D PFAM: FlgN; KEGG: bur:Bcep18194_A6374 FlgN; FlgN protein 2657258..2657698 Burkholderia cenocepacia AU 1054 4091364 YP_622287.1 CDS Bcen_2415 NC_008060.1 2657756 2659624 R PFAM: peptidase M24; KEGG: bur:Bcep18194_A6376 peptidase M24; peptidase M24 complement(2657756..2659624) Burkholderia cenocepacia AU 1054 4091365 YP_622288.1 CDS Bcen_2416 NC_008060.1 2659984 2660763 D PFAM: helix-turn-helix motif; Cupin 2, conserved barrel; KEGG: bur:Bcep18194_A6377 transcriptional regulator, XRE family with cupin sensor domain; XRE family transcriptional regulator 2659984..2660763 Burkholderia cenocepacia AU 1054 4091366 YP_622289.1 CDS cca NC_008060.1 2660819 2662060 R catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase complement(2660819..2662060) Burkholderia cenocepacia AU 1054 4091367 YP_622290.1 CDS Bcen_2418 NC_008060.1 2662057 2662704 R PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_A6379 glutathione S-transferase-like; glutathione S-transferase complement(2662057..2662704) Burkholderia cenocepacia AU 1054 4091368 YP_622291.1 CDS Bcen_2419 NC_008060.1 2662772 2663731 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA-like; Male sterility-like; KEGG: bur:Bcep18194_A6380 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2662772..2663731) Burkholderia cenocepacia AU 1054 4091369 YP_622292.1 CDS Bcen_2420 NC_008060.1 2663783 2665735 R PFAM: Lytic transglycosylase, catalytic; KEGG: bur:Bcep18194_A6381 lytic transglycosylase, catalytic; lytic transglycosylase, catalytic complement(2663783..2665735) Burkholderia cenocepacia AU 1054 4091370 YP_622293.1 CDS Bcen_2421 NC_008060.1 2665744 2666352 D PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: bur:Bcep18194_A6382 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 2665744..2666352 Burkholderia cenocepacia AU 1054 4091371 YP_622294.1 CDS Bcen_2422 NC_008060.1 2666426 2666938 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_A6383 transcriptional regulator; transcriptional regulator complement(2666426..2666938) Burkholderia cenocepacia AU 1054 4091372 YP_622295.1 CDS Bcen_2423 NC_008060.1 2667088 2667744 D TIGRFAM: conserved hypothetical protein; PFAM: Allophanate hydrolase subunit 1; KEGG: bur:Bcep18194_A6384 hypothetical protein; hypothetical protein 2667088..2667744 Burkholderia cenocepacia AU 1054 4091373 YP_622296.1 CDS Bcen_2424 NC_008060.1 2667741 2668808 D PFAM: Allophanate hydrolase subunit 2; KEGG: bur:Bcep18194_A6385 allophanate hydrolase subunit 2; allophanate hydrolase subunit 2 2667741..2668808 Burkholderia cenocepacia AU 1054 4091374 YP_622297.1 CDS Bcen_2425 NC_008060.1 2668805 2669629 D PFAM: LamB/YcsF; KEGG: bur:Bcep18194_A6386 LamB/YcsF family protein; LamB/YcsF family protein 2668805..2669629 Burkholderia cenocepacia AU 1054 4091375 YP_622298.1 CDS Bcen_2426 NC_008060.1 2670188 2671333 R PFAM: GumN; KEGG: bur:Bcep18194_A6387 GumN family protein; GumN protein complement(2670188..2671333) Burkholderia cenocepacia AU 1054 4091376 YP_622299.1 CDS dppF NC_008060.1 2671326 2672342 R Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit complement(2671326..2672342) Burkholderia cenocepacia AU 1054 4091377 YP_622300.1 CDS Bcen_2428 NC_008060.1 2672339 2673337 R KEGG: bur:Bcep18194_A6389 oligopeptide/dipeptide ABC transporter, ATPase subunit TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter; SMART: ATPase; oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein complement(2672339..2673337) Burkholderia cenocepacia AU 1054 4091378 YP_622301.1 CDS Bcen_2429 NC_008060.1 2673339 2674256 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A6390 oligopeptide/dipeptide ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2673339..2674256) Burkholderia cenocepacia AU 1054 4091379 YP_622302.1 CDS Bcen_2430 NC_008060.1 2674261 2675271 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A6391 oligopeptide/dipeptide ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2674261..2675271) Burkholderia cenocepacia AU 1054 4091380 YP_622303.1 CDS Bcen_2431 NC_008060.1 2675390 2677018 R PFAM: extracellular solute-binding protein, family 5; KEGG: bur:Bcep18194_A6392 ABC oligopeptide transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(2675390..2677018) Burkholderia cenocepacia AU 1054 4091381 YP_622304.1 CDS Bcen_2432 NC_008060.1 2677343 2678650 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A6393 major facilitator superfamily (MFS_1) transporter; general substrate transporter complement(2677343..2678650) Burkholderia cenocepacia AU 1054 4091382 YP_622305.1 CDS Bcen_2433 NC_008060.1 2678841 2679152 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: High potential iron-sulfur protein; KEGG: bur:Bcep18194_A6394 iron-sulfur protein; twin-arginine translocation pathway signal complement(2678841..2679152) Burkholderia cenocepacia AU 1054 4091383 YP_622306.1 CDS Bcen_2434 NC_008060.1 2679312 2680421 R PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A6395 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2679312..2680421) Burkholderia cenocepacia AU 1054 4091384 YP_622307.1 CDS Bcen_2435 NC_008060.1 2680601 2681611 R PFAM: ATPase AAA; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: bur:Bcep18194_A6396 ATPase AAA; ATPase AAA complement(2680601..2681611) Burkholderia cenocepacia AU 1054 4091385 YP_622308.1 CDS Bcen_2436 NC_008060.1 2681832 2682560 D PFAM: nitroreductase; KEGG: bur:Bcep18194_A6397 nitroreductase; nitroreductase 2681832..2682560 Burkholderia cenocepacia AU 1054 4091386 YP_622309.1 CDS Bcen_2437 NC_008060.1 2682707 2683195 D KEGG: bur:Bcep18194_A6398 hypothetical protein; hypothetical protein 2682707..2683195 Burkholderia cenocepacia AU 1054 4091387 YP_622310.1 CDS Bcen_2438 NC_008060.1 2683201 2684016 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bur:Bcep18194_A6399 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 2683201..2684016 Burkholderia cenocepacia AU 1054 4091388 YP_622311.1 CDS Bcen_2439 NC_008060.1 2684297 2685067 D PFAM: oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: bur:Bcep18194_A6401 ferredoxin--NADP(+) reductase; ferredoxin--NADP(+) reductase 2684297..2685067 Burkholderia cenocepacia AU 1054 4091389 YP_622312.1 CDS Bcen_2440 NC_008060.1 2685483 2686307 D PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_A6402 signal transduction histidine kinase; signal transduction histidine kinase 2685483..2686307 Burkholderia cenocepacia AU 1054 4091390 YP_622313.1 CDS Bcen_2441 NC_008060.1 2686304 2686960 D PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: bur:Bcep18194_A6403 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2686304..2686960 Burkholderia cenocepacia AU 1054 4091391 YP_622314.1 CDS Bcen_2442 NC_008060.1 2687194 2688600 D PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_A6404 amino acid tranporter; amino acid permease 2687194..2688600 Burkholderia cenocepacia AU 1054 4091392 YP_622315.1 CDS Bcen_2443 NC_008060.1 2688852 2689877 D PFAM: protein of unknown function DUF182; KEGG: bur:Bcep18194_A6406 protein of unknown function DUF182; hypothetical protein 2688852..2689877 Burkholderia cenocepacia AU 1054 4093655 YP_622316.1 CDS Bcen_2444 NC_008060.1 2689938 2690633 R PFAM: PepSY-associated TM helix; KEGG: bur:Bcep18194_A6407 hypothetical protein; PepSY-associated TM helix family protein complement(2689938..2690633) Burkholderia cenocepacia AU 1054 4093656 YP_622317.1 CDS Bcen_2445 NC_008060.1 2690940 2691257 R KEGG: bur:Bcep18194_A6408 flagellar protein FhlB; flagellar protein FhlB complement(2690940..2691257) Burkholderia cenocepacia AU 1054 4093657 YP_622318.1 CDS Bcen_2446 NC_008060.1 2691254 2692651 R KEGG: bur:Bcep18194_A6409 hypothetical protein; hypothetical protein complement(2691254..2692651) Burkholderia cenocepacia AU 1054 4093658 YP_622319.1 CDS Bcen_2447 NC_008060.1 2692790 2693122 R KEGG: bur:Bcep18194_A6410 hypothetical protein; hypothetical protein complement(2692790..2693122) Burkholderia cenocepacia AU 1054 4093659 YP_622320.1 CDS Bcen_2448 NC_008060.1 2693119 2693553 R PFAM: flagellar protein FliS; KEGG: bur:Bcep18194_A6411 flagellar protein FliS; flagellar protein FliS complement(2693119..2693553) Burkholderia cenocepacia AU 1054 4093660 YP_622321.1 CDS Bcen_2449 NC_008060.1 2693757 2694116 R TIGRFAM: flagellar hook-basal body complex protein (FliE); PFAM: flagellar hook-basal body complex protein FliE; KEGG: bur:Bcep18194_A6412 flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein (FliE) complement(2693757..2694116) Burkholderia cenocepacia AU 1054 4093661 YP_622322.1 CDS fliF NC_008060.1 2694350 2696113 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 2694350..2696113 Burkholderia cenocepacia AU 1054 4093662 YP_622323.1 CDS fliG NC_008060.1 2696103 2697098 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 2696103..2697098 Burkholderia cenocepacia AU 1054 4093663 YP_622324.1 CDS fliH NC_008060.1 2697091 2697774 D binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 2697091..2697774 Burkholderia cenocepacia AU 1054 4093664 YP_622325.1 CDS Bcen_2453 NC_008060.1 2697771 2699312 D KEGG: bur:Bcep18194_A6416 ATPase FliI/YscN TIGRFAM: ATP synthase FliI/YscN; Flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: ATPase; flagellar protein export ATPase FliI 2697771..2699312 Burkholderia cenocepacia AU 1054 4093665 YP_622326.1 CDS Bcen_2454 NC_008060.1 2699318 2699776 D TIGRFAM: Flagellar export FliJ; PFAM: flagellar FliJ protein; KEGG: bur:Bcep18194_A6417 flagellar FliJ and related; flagellar export FliJ 2699318..2699776 Burkholderia cenocepacia AU 1054 4093666 YP_622327.1 CDS Bcen_2455 NC_008060.1 2699808 2701166 D PFAM: flagellar hook-length control protein; KEGG: bur:Bcep18194_A6418 flagellar hook-length control protein; flagellar hook-length control protein 2699808..2701166 Burkholderia cenocepacia AU 1054 4093667 YP_622328.1 CDS Bcen_2456 NC_008060.1 2701198 2702838 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_A6419 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(2701198..2702838) Burkholderia cenocepacia AU 1054 4093668 YP_622329.1 CDS Bcen_2457 NC_008060.1 2702853 2703101 D hypothetical protein 2702853..2703101 Burkholderia cenocepacia AU 1054 4093669 YP_622330.1 CDS Bcen_2458 NC_008060.1 2703564 2705006 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_A6421 aldehyde dehydrogenase; aldehyde dehydrogenase 2703564..2705006 Burkholderia cenocepacia AU 1054 4093670 YP_622331.1 CDS Bcen_2459 NC_008060.1 2705077 2706108 R catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase complement(2705077..2706108) Burkholderia cenocepacia AU 1054 4093671 YP_622332.1 CDS Bcen_2460 NC_008060.1 2706146 2706358 R KEGG: bte:BTH_I0182 hypothetical protein; hypothetical protein complement(2706146..2706358) Burkholderia cenocepacia AU 1054 4093672 YP_622333.1 CDS Bcen_2461 NC_008060.1 2707166 2708053 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_A6425 protein of unknown function DUF6, transmembrane; hypothetical protein 2707166..2708053 Burkholderia cenocepacia AU 1054 4093673 YP_622334.1 CDS Bcen_2462 NC_008060.1 2708408 2708593 D KEGG: bur:Bcep18194_A6426 hypothetical protein; hypothetical protein 2708408..2708593 Burkholderia cenocepacia AU 1054 4093674 YP_622335.1 CDS Bcen_2463 NC_008060.1 2708700 2709743 R PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_A6427 aldo/keto reductase; aldo/keto reductase complement(2708700..2709743) Burkholderia cenocepacia AU 1054 4093675 YP_622336.1 CDS Bcen_2464 NC_008060.1 2709937 2710143 D KEGG: bur:Bcep18194_A6428 hypothetical protein; hypothetical protein 2709937..2710143 Burkholderia cenocepacia AU 1054 4093676 YP_622337.1 CDS Bcen_2465 NC_008060.1 2710352 2711125 R PFAM: Phytanoyl-CoA dioxygenase; KEGG: bur:Bcep18194_A6429 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase complement(2710352..2711125) Burkholderia cenocepacia AU 1054 4093677 YP_622338.1 CDS Bcen_2466 NC_008060.1 2711478 2711819 D KEGG: bur:Bcep18194_A6430 hypothetical protein; hypothetical protein 2711478..2711819 Burkholderia cenocepacia AU 1054 4093678 YP_622339.1 CDS Bcen_2467 NC_008060.1 2711929 2713116 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(2711929..2713116) Burkholderia cenocepacia AU 1054 4093679 YP_622340.1 CDS Bcen_2468 NC_008060.1 2713382 2714266 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2713382..2714266 Burkholderia cenocepacia AU 1054 4093680 YP_622341.1 CDS Bcen_2469 NC_008060.1 2714297 2714599 R TIGRFAM: Addiction module antidote protein, HigA; KEGG: bur:Bcep18194_A6433 plasmid maintenance system antidote protein, XRE family; XRE family transcriptional regulator complement(2714297..2714599) Burkholderia cenocepacia AU 1054 4093681 YP_622342.1 CDS Bcen_2470 NC_008060.1 2714613 2714891 R PFAM: plasmid maintenance system killer; KEGG: bur:Bcep18194_A6434 plasmid maintenance system killer; plasmid maintenance system killer protein complement(2714613..2714891) Burkholderia cenocepacia AU 1054 4093682 YP_622343.1 CDS dapF NC_008060.1 2715234 2716163 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 2715234..2716163 Burkholderia cenocepacia AU 1054 4093683 YP_622344.1 CDS Bcen_2472 NC_008060.1 2716201 2716926 D PFAM: protein of unknown function DUF484; KEGG: bur:Bcep18194_A6436 hypothetical protein; hypothetical protein 2716201..2716926 Burkholderia cenocepacia AU 1054 4093684 YP_622345.1 CDS xerC NC_008060.1 2716940 2717860 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2716940..2717860 Burkholderia cenocepacia AU 1054 4093685 YP_622346.1 CDS Bcen_2474 NC_008060.1 2717937 2719151 D SMART: PUA; KEGG: bur:Bcep18194_A6438 SAM-dependent methyltransferases; PUA domain-containing protein 2717937..2719151 Burkholderia cenocepacia AU 1054 4093686 YP_622347.1 CDS Bcen_2475 NC_008060.1 2719247 2720428 D PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW-like; KEGG: bur:Bcep18194_A6439 cobalamin synthesis protein/P47K; cobalamin synthesis protein, P47K 2719247..2720428 Burkholderia cenocepacia AU 1054 4093687 YP_622348.1 CDS Bcen_2476 NC_008060.1 2720926 2721342 D TIGRFAM: RNA polymerase-binding, DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: bur:Bcep18194_A6440 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator 2720926..2721342 Burkholderia cenocepacia AU 1054 4093688 YP_622349.1 CDS Bcen_2477 NC_008060.1 2721580 2722116 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 2721580..2722116 Burkholderia cenocepacia AU 1054 4093689 YP_622350.1 CDS hslU NC_008060.1 2722127 2723470 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 2722127..2723470 Burkholderia cenocepacia AU 1054 4093690 YP_622351.1 CDS Bcen_2479 NC_008060.1 2723538 2724080 R PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: bur:Bcep18194_A6444 two component transcriptional regulator, fis family; response regulator receiver protein complement(2723538..2724080) Burkholderia cenocepacia AU 1054 4093691 YP_622352.1 CDS Bcen_2480 NC_008060.1 2724094 2725524 R PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; KEGG: bur:Bcep18194_A6445 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase complement(2724094..2725524) Burkholderia cenocepacia AU 1054 4093692 YP_622353.1 CDS Bcen_2481 NC_008060.1 2725605 2725829 R KEGG: bte:BTH_I0161 hypothetical protein; hypothetical protein complement(2725605..2725829) Burkholderia cenocepacia AU 1054 4093693 YP_622354.1 CDS Bcen_2482 NC_008060.1 2726057 2727022 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 2726057..2727022 Burkholderia cenocepacia AU 1054 4093221 YP_622355.1 CDS Bcen_2483 NC_008060.1 2727019 2727810 D TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3; Pyrimidine 5-nucleotidase; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_A6448 HAD-superfamily hydrolase subfamily IA, variant 3; pyrimidine 5-nucleotidase 2727019..2727810 Burkholderia cenocepacia AU 1054 4093222 YP_622356.2 CDS slmA NC_008060.1 2727777 2728439 D FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 2727777..2728439 Burkholderia cenocepacia AU 1054 4093223 YP_622357.1 CDS metX NC_008060.1 2728705 2729850 D Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 2728705..2729850 Burkholderia cenocepacia AU 1054 4093224 YP_622358.1 CDS Bcen_2486 NC_008060.1 2729847 2730455 D PFAM: Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_A6451 methionine biosynthesis MetW; methionine biosynthesis MetW 2729847..2730455 Burkholderia cenocepacia AU 1054 4093225 YP_622359.1 CDS Bcen_2487 NC_008060.1 2730572 2731993 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A6452 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 2730572..2731993 Burkholderia cenocepacia AU 1054 4093226 YP_622360.1 CDS Bcen_2488 NC_008060.1 2731983 2733035 D PFAM: peptidase M48, Ste24p; KEGG: bur:Bcep18194_A6453 peptidase M48, Ste24p; peptidase M48, Ste24p 2731983..2733035 Burkholderia cenocepacia AU 1054 4093227 YP_622361.1 CDS Bcen_2489 NC_008060.1 2733059 2734003 R PFAM: helix-turn-helix, AraC type; AraC-type transcriptional regulator; KEGG: bur:Bcep18194_A6454 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2733059..2734003) Burkholderia cenocepacia AU 1054 4093228 YP_622362.1 CDS Bcen_2490 NC_008060.1 2734230 2735282 D PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_A6455 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase 2734230..2735282 Burkholderia cenocepacia AU 1054 4093229 YP_622363.1 CDS Bcen_2491 NC_008060.1 2735375 2736148 R KEGG: bur:Bcep18194_A6456 exodeoxyribonuclease III xth TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III (xth) complement(2735375..2736148) Burkholderia cenocepacia AU 1054 4093230 YP_622364.1 CDS Bcen_2492 NC_008060.1 2736190 2737029 R PFAM: protein of unknown function DUF344; KEGG: bur:Bcep18194_A6457 protein of unknown function DUF344; hypothetical protein complement(2736190..2737029) Burkholderia cenocepacia AU 1054 4093231 YP_622365.1 CDS gatB NC_008060.1 2737148 2738623 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(2737148..2738623) Burkholderia cenocepacia AU 1054 4093232 YP_622366.1 CDS gatA NC_008060.1 2738628 2740118 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(2738628..2740118) Burkholderia cenocepacia AU 1054 4093233 YP_622367.1 CDS gatC NC_008060.1 2740187 2740486 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(2740187..2740486) Burkholderia cenocepacia AU 1054 4093234 YP_622368.1 CDS Bcen_2496 NC_008060.1 2740853 2741896 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2740853..2741896 Burkholderia cenocepacia AU 1054 4093235 YP_622369.1 CDS Bcen_2497 NC_008060.1 2742035 2743111 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 2742035..2743111 Burkholderia cenocepacia AU 1054 4093236 YP_622370.1 CDS Bcen_2498 NC_008060.1 2743108 2743620 D PFAM: Rod shape-determining protein MreD; KEGG: bur:Bcep18194_A6463 rod shape-determining protein MreD; rod shape-determining protein MreD 2743108..2743620 Burkholderia cenocepacia AU 1054 4093237 YP_622371.1 CDS Bcen_2499 NC_008060.1 2743722 2746019 D PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: bur:Bcep18194_A6464 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 2743722..2746019 Burkholderia cenocepacia AU 1054 4093238 YP_622372.1 CDS Bcen_2500 NC_008060.1 2746031 2747179 D TIGRFAM: Rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: bur:Bcep18194_A6465 rod shape-determining protein RodA; rod shape-determining protein RodA 2746031..2747179 Burkholderia cenocepacia AU 1054 4093239 YP_622373.1 CDS Bcen_2501 NC_008060.1 2747255 2748007 R PFAM: Sel1-like repeat; KEGG: bur:Bcep18194_A6466 Sel1-like repeat protein; Sel1 repeat-containing protein complement(2747255..2748007) Burkholderia cenocepacia AU 1054 4093240 YP_622374.1 CDS Bcen_2502 NC_008060.1 2748004 2748789 R PFAM: HpcH/HpaI aldolase; KEGG: bur:Bcep18194_A6467 2-dehydro-3-deoxyglucarate aldolase; 2-dehydro-3-deoxyglucarate aldolase complement(2748004..2748789) Burkholderia cenocepacia AU 1054 4093241 YP_622375.1 CDS Bcen_2503 NC_008060.1 2749128 2749580 R PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bur:Bcep18194_A6468 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; 6-pyruvoyl-tetrahydropterin synthase complement(2749128..2749580) Burkholderia cenocepacia AU 1054 4093242 YP_622376.1 CDS Bcen_2504 NC_008060.1 2749599 2750231 R KEGG: bur:Bcep18194_A6469 organic radical activating enzymes-like; organic radical activating enzymes-like complement(2749599..2750231) Burkholderia cenocepacia AU 1054 4093243 YP_622377.1 CDS Bcen_2505 NC_008060.1 2750308 2751042 R PFAM: ExsB; KEGG: bur:Bcep18194_A6470 ExsB family protein; ExsB protein complement(2750308..2751042) Burkholderia cenocepacia AU 1054 4093244 YP_622378.1 CDS Bcen_2506 NC_008060.1 2751529 2752230 R PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: bur:Bcep18194_A6471 two component transcriptional regulator, fis family; response regulator receiver protein complement(2751529..2752230) Burkholderia cenocepacia AU 1054 4093246 YP_622379.1 CDS Bcen_2507 NC_008060.1 2752231 2754645 R PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; PAS fold-4; KEGG: bur:Bcep18194_A6472 multi-sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase complement(2752231..2754645) Burkholderia cenocepacia AU 1054 4093247 YP_622380.1 CDS Bcen_2508 NC_008060.1 2754635 2755225 R KEGG: bur:Bcep18194_A6473 hypothetical protein; hypothetical protein complement(2754635..2755225) Burkholderia cenocepacia AU 1054 4093248 YP_622381.1 CDS Bcen_2509 NC_008060.1 2755222 2756613 R TIGRFAM: sun protein; PFAM: Fmu (Sun); KEGG: bur:Bcep18194_A6474 Fmu, rRNA SAM-dependent methyltransferase; sun protein complement(2755222..2756613) Burkholderia cenocepacia AU 1054 4093249 YP_622382.1 CDS Bcen_2510 NC_008060.1 2756844 2757701 R PFAM: peptidase M48, Ste24p; KEGG: bur:Bcep18194_A6475 peptidase M48, Ste24p; M48 family peptidase complement(2756844..2757701) Burkholderia cenocepacia AU 1054 4093250 YP_622383.1 CDS Bcen_2511 NC_008060.1 2757802 2758443 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_A6476 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA complement(2757802..2758443) Burkholderia cenocepacia AU 1054 4093251 YP_622384.1 CDS fmt NC_008060.1 2758563 2759555 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(2758563..2759555) Burkholderia cenocepacia AU 1054 4093252 YP_622385.1 CDS def NC_008060.1 2759590 2760093 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(2759590..2760093) Burkholderia cenocepacia AU 1054 4093253 YP_622386.1 CDS Bcen_2514 NC_008060.1 2760165 2761592 D TIGRFAM: DNA processing protein DprA, ; PFAM: SMF protein; KEGG: bur:Bcep18194_A6479 smf protein; DNA processing protein DprA 2760165..2761592 Burkholderia cenocepacia AU 1054 4093254 YP_622387.1 CDS Bcen_2515 NC_008060.1 2761629 2762009 D PFAM: Thioredoxin domain; KEGG: bur:Bcep18194_A6480 hypothetical protein; thioredoxin domain-containing protein 2761629..2762009 Burkholderia cenocepacia AU 1054 4093255 YP_622388.1 CDS Bcen_2516 NC_008060.1 2762257 2763519 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902; KEGG: bte:BTH_II1545 ISBma3, transposase; transposase IS116/IS110/IS902 2762257..2763519 Burkholderia cenocepacia AU 1054 4093256 YP_622389.1 CDS Bcen_2517 NC_008060.1 2763656 2766253 D decatenates replicating daughter chromosomes; DNA topoisomerase III 2763656..2766253 Burkholderia cenocepacia AU 1054 4093257 YP_622390.1 CDS Bcen_2518 NC_008060.1 2766384 2767433 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A6482 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2766384..2767433) Burkholderia cenocepacia AU 1054 4093258 YP_622391.1 CDS Bcen_2519 NC_008060.1 2767863 2768876 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A6483 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 2767863..2768876 Burkholderia cenocepacia AU 1054 4093029 YP_622392.1 CDS Bcen_2520 NC_008060.1 2768923 2769789 R PFAM: Patatin; KEGG: bur:Bcep18194_A6484 patatin; patatin complement(2768923..2769789) Burkholderia cenocepacia AU 1054 4093030 YP_622393.1 CDS Bcen_2521 NC_008060.1 2769798 2770202 R TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily; KEGG: bur:Bcep18194_A6485 phenylacetic acid degradation-related protein; phenylacetic acid degradation-related protein complement(2769798..2770202) Burkholderia cenocepacia AU 1054 4093031 YP_622394.1 CDS Bcen_2522 NC_008060.1 2770658 2771704 D KEGG: bur:Bcep18194_A6486 hypothetical protein; hypothetical protein 2770658..2771704 Burkholderia cenocepacia AU 1054 4093033 YP_622395.1 CDS Bcen_2523 NC_008060.1 2771741 2772355 R PFAM: protein of unknown function DUF1470; KEGG: bur:Bcep18194_A6487 protein of unknown function DUF1470; hypothetical protein complement(2771741..2772355) Burkholderia cenocepacia AU 1054 4093034 YP_622396.1 CDS Bcen_2524 NC_008060.1 2772437 2773252 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A6488 alpha/beta hydrolase; alpha/beta hydrolase 2772437..2773252 Burkholderia cenocepacia AU 1054 4093035 YP_622397.1 CDS Bcen_2525 NC_008060.1 2773283 2774089 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A6489 ABC amino acid transporter, ATPase subunit; ABC transporter complement(2773283..2774089) Burkholderia cenocepacia AU 1054 4093036 YP_622398.1 CDS Bcen_2526 NC_008060.1 2774086 2774766 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A6490 amino acid ABC transporter, inner membrane subunit; amino acid ABC transporter permease complement(2774086..2774766) Burkholderia cenocepacia AU 1054 4093037 YP_622399.1 CDS Bcen_2527 NC_008060.1 2774781 2775563 R PFAM: extracellular solute-binding protein, family 3; SMART: Ionotropic glutamate receptor; KEGG: bur:Bcep18194_A6491 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(2774781..2775563) Burkholderia cenocepacia AU 1054 4093038 YP_622400.1 CDS Bcen_2528 NC_008060.1 2775744 2777198 R PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_A6492 aldehyde dehydrogenase; aldehyde dehydrogenase complement(2775744..2777198) Burkholderia cenocepacia AU 1054 4093039 YP_622401.1 CDS Bcen_2529 NC_008060.1 2777226 2778641 R TIGRFAM: Phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bur:Bcep18194_A6493 type I phosphodiesterase/nucleotide pyrophosphatase; phosphonoacetate hydrolase complement(2777226..2778641) Burkholderia cenocepacia AU 1054 4093040 YP_622402.1 CDS Bcen_2530 NC_008060.1 2778811 2780376 D PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A6498 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2778811..2780376 Burkholderia cenocepacia AU 1054 4093041 YP_622403.1 CDS Bcen_2531 NC_008060.1 2780469 2781197 R PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: bur:Bcep18194_A6499 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2780469..2781197) Burkholderia cenocepacia AU 1054 4093042 YP_622404.1 CDS Bcen_2532 NC_008060.1 2781408 2783579 R KEGG: bur:Bcep18194_A6500 phospholipase C TIGRFAM: Twin-arginine translocation pathway signal; PFAM: phosphoesterase; protein of unknown function DUF756; twin-arginine translocation pathway signal complement(2781408..2783579) Burkholderia cenocepacia AU 1054 4093043 YP_622405.1 CDS Bcen_2533 NC_008060.1 2783806 2784741 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A6501 transcriptional regulator, LysR family; LysR family transcriptional regulator 2783806..2784741 Burkholderia cenocepacia AU 1054 4093044 YP_622406.1 CDS Bcen_2534 NC_008060.1 2784841 2786481 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: bur:Bcep18194_A6502 L-lactate transporter; L-lactate transport complement(2784841..2786481) Burkholderia cenocepacia AU 1054 4093045 YP_622407.1 CDS Bcen_2535 NC_008060.1 2786901 2787218 D KEGG: bur:Bcep18194_A6504 hypothetical protein; hypothetical protein 2786901..2787218 Burkholderia cenocepacia AU 1054 4093046 YP_622408.1 CDS Bcen_2536 NC_008060.1 2787294 2788895 R involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase complement(2787294..2788895) Burkholderia cenocepacia AU 1054 4093047 YP_622409.1 CDS Bcen_2537 NC_008060.1 2788892 2789305 R hypothetical protein complement(2788892..2789305) Burkholderia cenocepacia AU 1054 4093048 YP_622410.1 CDS Bcen_2538 NC_008060.1 2789372 2790331 R PFAM: HhH-GPD; AlkA-like; KEGG: bur:Bcep18194_A6507 3-methyladenine DNA glycosylase/8-oxoguanineDNA glycosylase; AlkA-like protein complement(2789372..2790331) Burkholderia cenocepacia AU 1054 4093049 YP_622411.1 CDS Bcen_2539 NC_008060.1 2790328 2791419 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase; Ada, metal-binding; methylguanine DNA methyltransferase, ribonuclease-like; KEGG: bur:Bcep18194_A6508 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2790328..2791419) Burkholderia cenocepacia AU 1054 4093050 YP_622412.1 CDS Bcen_2540 NC_008060.1 2791851 2792264 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_A6509 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2791851..2792264 Burkholderia cenocepacia AU 1054 4093051 YP_622413.1 CDS Bcen_2541 NC_008060.1 2792297 2792851 R PFAM: YaeQ; KEGG: bur:Bcep18194_A6510 YaeQ family protein; YaeQ protein complement(2792297..2792851) Burkholderia cenocepacia AU 1054 4093052 YP_622414.1 CDS Bcen_2542 NC_008060.1 2793041 2793388 R KEGG: bur:Bcep18194_A6511 hypothetical protein; hypothetical protein complement(2793041..2793388) Burkholderia cenocepacia AU 1054 4093053 YP_622415.1 CDS Bcen_2543 NC_008060.1 2793891 2794433 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A6513 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2793891..2794433) Burkholderia cenocepacia AU 1054 4093054 YP_622416.1 CDS Bcen_2544 NC_008060.1 2794585 2794755 D KEGG: bte:BTH_I0080 hypothetical protein; hypothetical protein 2794585..2794755 Burkholderia cenocepacia AU 1054 4093055 YP_622417.1 CDS Bcen_2545 NC_008060.1 2794871 2795119 D KEGG: bur:Bcep18194_A6514 hypothetical protein; hypothetical protein 2794871..2795119 Burkholderia cenocepacia AU 1054 4093056 YP_622418.1 CDS Bcen_2546 NC_008060.1 2795230 2796588 D TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bur:Bcep18194_A6515 diguanylate cyclase (GGDEF domain); diguanylate cyclase 2795230..2796588 Burkholderia cenocepacia AU 1054 4093057 YP_622419.1 CDS trmE NC_008060.1 2797006 2798400 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(2797006..2798400) Burkholderia cenocepacia AU 1054 4093058 YP_622420.1 CDS Bcen_2548 NC_008060.1 2798725 2799180 D KEGG: bur:Bcep18194_A6519 hypothetical protein; hypothetical protein 2798725..2799180 Burkholderia cenocepacia AU 1054 4093059 YP_622421.1 CDS Bcen_2549 NC_008060.1 2799316 2800974 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(2799316..2800974) Burkholderia cenocepacia AU 1054 4093060 YP_622422.1 CDS Bcen_2550 NC_008060.1 2800983 2801249 R PFAM: protein of unknown function DUF37; KEGG: bur:Bcep18194_A6521 protein of unknown function DUF37; hypothetical protein complement(2800983..2801249) Burkholderia cenocepacia AU 1054 4093061 YP_622423.1 CDS Bcen_2551 NC_008060.1 2801325 2801786 R TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: bur:Bcep18194_A6522 ribonuclease P protein; ribonuclease P protein component complement(2801325..2801786) Burkholderia cenocepacia AU 1054 4093062 YP_622424.1 CDS rpmH NC_008060.1 2801802 2801936 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(2801802..2801936) Burkholderia cenocepacia AU 1054 4093063 YP_622425.1 CDS dnaA NC_008060.1 2802249 2803934 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 2802249..2803934 Burkholderia cenocepacia AU 1054 4093064 YP_622426.1 CDS Bcen_2554 NC_008060.1 2804105 2805211 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2804105..2805211 Burkholderia cenocepacia AU 1054 4093065 YP_622427.1 CDS gyrB NC_008060.1 2805403 2807877 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 2805403..2807877 Burkholderia cenocepacia AU 1054 4093066 YP_622428.1 CDS Bcen_2556 NC_008060.1 2808688 2810193 D PFAM: Integrase, catalytic region; KEGG: psp:PSPPH_1140 ISPsy20, transposase IstA; integrase catalytic subunit 2808688..2810193 Burkholderia cenocepacia AU 1054 4092552 YP_622429.1 CDS Bcen_2557 NC_008060.1 2810186 2810983 D PFAM: IstB-like ATP-binding protein; SMART: ATPase; KEGG: psp:PSPPH_1141 ISPsy20, transposase IstB; IstB-like ATP-binding protein 2810186..2810983 Burkholderia cenocepacia AU 1054 4092553 YP_622430.1 CDS Bcen_2558 NC_008060.1 2811050 2811166 R KEGG: lpf:lpl0145 DNA (cytosine-5-)-methyltransferase; DNA (cytosine-5-)-methyltransferase complement(2811050..2811166) Burkholderia cenocepacia AU 1054 4092554 YP_622431.1 CDS Bcen_2559 NC_008060.1 2811487 2811747 D PFAM: transposase IS3/IS911; KEGG: bbr:BB2492 transposase; transposase IS3/IS911 2811487..2811747 Burkholderia cenocepacia AU 1054 4092555 YP_622432.1 CDS Bcen_2560 NC_008060.1 2811786 2812103 D KEGG: bps:BPSL0943 insertion element protein; insertion element protein 2811786..2812103 Burkholderia cenocepacia AU 1054 4092556 YP_622433.1 CDS Bcen_2561 NC_008060.1 2817967 2818743 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(2817967..2818743) Burkholderia cenocepacia AU 1054 4092562 YP_622434.1 CDS Bcen_2562 NC_008060.1 2818873 2820579 D TIGRFAM: Phenylacetic acid degradation protein paaN2; PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_A3630 phenylacetic acid degradation protein paaN2; phenylacetic acid degradation protein paaN2 2818873..2820579 Burkholderia cenocepacia AU 1054 4092563 YP_622435.1 CDS Bcen_2563 NC_008060.1 2820667 2821869 D catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 2820667..2821869 Burkholderia cenocepacia AU 1054 4092564 YP_622436.1 CDS Bcen_2564 NC_008060.1 2821915 2822706 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2821915..2822706 Burkholderia cenocepacia AU 1054 4092565 YP_622437.1 CDS Bcen_2565 NC_008060.1 2822708 2823160 D TIGRFAM: Phenylacetic acid degradation-related protein; Phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily; KEGG: bur:Bcep18194_A3627 phenylacetic acid degradation protein PaaD; phenylacetic acid degradation protein PaaD 2822708..2823160 Burkholderia cenocepacia AU 1054 4092566 YP_622438.1 CDS Bcen_2566 NC_008060.1 2823199 2824497 D TIGRFAM: Phenylacetate-CoA ligase; KEGG: bur:Bcep18194_A3626 phenylacetate-CoA ligase; phenylacetate-CoA ligase 2823199..2824497 Burkholderia cenocepacia AU 1054 4092567 YP_622439.1 CDS Bcen_2567 NC_008060.1 2824785 2826014 R PFAM: MltA; 3D; KEGG: bur:Bcep18194_A3625 membrane-bound lytic murein transglycosylase; MltA protein complement(2824785..2826014) Burkholderia cenocepacia AU 1054 4092568 YP_622440.1 CDS apaG NC_008060.1 2826100 2826474 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(2826100..2826474) Burkholderia cenocepacia AU 1054 4092569 YP_622441.1 CDS Bcen_2569 NC_008060.1 2826652 2827338 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 2826652..2827338 Burkholderia cenocepacia AU 1054 4092570 YP_622442.1 CDS Bcen_2570 NC_008060.1 2827343 2828107 D KEGG: bur:Bcep18194_A3622 2-phosphoglycolate phosphatase TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; phosphoglycolate phosphatase 2827343..2828107 Burkholderia cenocepacia AU 1054 4092571 YP_622443.1 CDS Bcen_2571 NC_008060.1 2828465 2829958 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2828465..2829958 Burkholderia cenocepacia AU 1054 4092572 YP_622444.1 CDS Bcen_2572 NC_008060.1 2829972 2830571 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2829972..2830571 Burkholderia cenocepacia AU 1054 4092573 YP_622445.1 CDS trpD NC_008060.1 2830549 2831616 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2830549..2831616 Burkholderia cenocepacia AU 1054 4092574 YP_622446.1 CDS trpC NC_008060.1 2831645 2832430 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 2831645..2832430 Burkholderia cenocepacia AU 1054 4092575 YP_622447.1 CDS Bcen_2575 NC_008060.1 2832430 2833056 D PFAM: adenylate cyclase; KEGG: bur:Bcep18194_A3617 adenylate cyclase; adenylate cyclase 2832430..2833056 Burkholderia cenocepacia AU 1054 4092576 YP_622448.1 CDS Bcen_2576 NC_008060.1 2833070 2833987 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 2833070..2833987 Burkholderia cenocepacia AU 1054 4092577 YP_622449.1 CDS Bcen_2577 NC_008060.1 2834117 2834713 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_A3615 (acyl-carrier protein) phosphodiesterase; ACP phosphodiesterase complement(2834117..2834713) Burkholderia cenocepacia AU 1054 4092578 YP_622450.1 CDS Bcen_2578 NC_008060.1 2834862 2836661 R PFAM: peptidase M61; SMART: PDZ/DHR/GLGF; KEGG: bur:Bcep18194_A3614 peptidase M61; peptidase M61 complement(2834862..2836661) Burkholderia cenocepacia AU 1054 4092579 YP_622451.1 CDS Bcen_2579 NC_008060.1 2836767 2837495 R KEGG: bur:Bcep18194_A3613 protein-disulfide isomerase-like; protein-disulfide isomerase-like complement(2836767..2837495) Burkholderia cenocepacia AU 1054 4092580 YP_622452.1 CDS Bcen_2580 NC_008060.1 2837586 2838764 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: bur:Bcep18194_A3612 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; ubiquinone biosynthesis hydroxylase family protein complement(2837586..2838764) Burkholderia cenocepacia AU 1054 4092581 YP_622453.1 CDS Bcen_2581 NC_008060.1 2839013 2840107 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2839013..2840107 Burkholderia cenocepacia AU 1054 4092582 YP_622454.1 CDS Bcen_2582 NC_008060.1 2840258 2841457 R KEGG: reu:Reut_A2636 membrane protein; hypothetical protein complement(2840258..2841457) Burkholderia cenocepacia AU 1054 4092583 YP_622455.1 CDS Bcen_2583 NC_008060.1 2841687 2843078 R TIGRFAM: GABA permease; PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_A3609 GabA transporter; GABA permease complement(2841687..2843078) Burkholderia cenocepacia AU 1054 4092584 YP_622456.1 CDS Bcen_2584 NC_008060.1 2843455 2843799 R PFAM: protein of unknown function DUF661; KEGG: bur:Bcep18194_A3608 protein of unknown function DUF661; hypothetical protein complement(2843455..2843799) Burkholderia cenocepacia AU 1054 4092585 YP_622457.1 CDS Bcen_2585 NC_008060.1 2843881 2845152 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3607 major facilitator superfamily (MFS_1) transporter; twin-arginine translocation pathway signal complement(2843881..2845152) Burkholderia cenocepacia AU 1054 4093105 YP_622458.1 CDS Bcen_2586 NC_008060.1 2845358 2846275 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3606 transcriptional regulator, LysR family; LysR family transcriptional regulator 2845358..2846275 Burkholderia cenocepacia AU 1054 4093106 YP_622459.1 CDS Bcen_2587 NC_008060.1 2846393 2848510 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 2846393..2848510 Burkholderia cenocepacia AU 1054 4093107 YP_622460.1 CDS Bcen_2588 NC_008060.1 2848641 2849264 R TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_A3603 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase complement(2848641..2849264) Burkholderia cenocepacia AU 1054 4093108 YP_622461.1 CDS Bcen_2589 NC_008060.1 2849261 2849812 R PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_A3602 isochorismatase hydrolase; isochorismatase hydrolase complement(2849261..2849812) Burkholderia cenocepacia AU 1054 4093109 YP_622462.1 CDS Bcen_2590 NC_008060.1 2849890 2851704 R PFAM: peptidase M24; KEGG: bur:Bcep18194_A3601 peptidase M24; peptidase M24 complement(2849890..2851704) Burkholderia cenocepacia AU 1054 4093110 YP_622463.1 CDS Bcen_2591 NC_008060.1 2851723 2851977 R KEGG: bur:Bcep18194_A3600 hypothetical protein; hypothetical protein complement(2851723..2851977) Burkholderia cenocepacia AU 1054 4093111 YP_622464.1 CDS Bcen_2592 NC_008060.1 2852149 2852913 D PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A3599 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2852149..2852913 Burkholderia cenocepacia AU 1054 4093112 YP_622465.1 CDS hemA NC_008060.1 2852940 2854238 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2852940..2854238 Burkholderia cenocepacia AU 1054 4093113 YP_622466.1 CDS Bcen_2594 NC_008060.1 2854328 2855431 D PFAM: transposase, IS4; KEGG: gsu:GSU2597 ISGsu2, transposase; transposase, IS4 2854328..2855431 Burkholderia cenocepacia AU 1054 4093114 YP_622467.1 CDS prfA NC_008060.1 2855688 2856770 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2855688..2856770 Burkholderia cenocepacia AU 1054 4093115 YP_622468.1 CDS Bcen_2596 NC_008060.1 2856778 2857620 D TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: bur:Bcep18194_A3596 modification methylase HemK; HemK family modification methylase 2856778..2857620 Burkholderia cenocepacia AU 1054 4093116 YP_622469.1 CDS Bcen_2597 NC_008060.1 2857688 2857999 D TIGRFAM: Glutaredoxin-related protein; PFAM: glutaredoxin; KEGG: bur:Bcep18194_A3595 glutaredoxin-related protein; glutaredoxin-like protein 2857688..2857999 Burkholderia cenocepacia AU 1054 4093117 YP_622470.1 CDS Bcen_2598 NC_008060.1 2858023 2858619 D catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2858023..2858619 Burkholderia cenocepacia AU 1054 4093118 YP_622471.1 CDS Bcen_2599 NC_008060.1 2858822 2859613 D PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: bur:Bcep18194_A3593 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; extradiol ring-cleavage dioxygenase III subunit B 2858822..2859613 Burkholderia cenocepacia AU 1054 4093119 YP_622472.1 CDS Bcen_2601 NC_008060.1 2861089 2862687 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_A3592 amino acid transporter; amino acid permease-associated region complement(2861089..2862687) Burkholderia cenocepacia AU 1054 4093121 YP_622473.1 CDS Bcen_2602 NC_008060.1 2863107 2863310 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: bur:Bcep18194_A3591 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 2863107..2863310 Burkholderia cenocepacia AU 1054 4093122 YP_622474.1 CDS Bcen_2603 NC_008060.1 2863414 2864664 R KEGG: bur:Bcep18194_A3590 molecular chaperone-like; molecular chaperone-like complement(2863414..2864664) Burkholderia cenocepacia AU 1054 4093123 YP_622475.1 CDS Bcen_2604 NC_008060.1 2864889 2865494 R PFAM: nitroreductase; KEGG: bur:Bcep18194_A3589 nitroreductase; nitroreductase complement(2864889..2865494) Burkholderia cenocepacia AU 1054 4093124 YP_622476.1 CDS Bcen_2605 NC_008060.1 2865652 2866935 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3588 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2865652..2866935) Burkholderia cenocepacia AU 1054 4093125 YP_622477.1 CDS Bcen_2606 NC_008060.1 2867155 2867775 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_A3587 transcriptional regulator, TetR family; TetR family transcriptional regulator 2867155..2867775 Burkholderia cenocepacia AU 1054 4093126 YP_622478.1 CDS Bcen_2607 NC_008060.1 2867853 2868425 D PFAM: protein of unknown function DUF1415; KEGG: bur:Bcep18194_A3586 protein of unknown function DUF1415; hypothetical protein 2867853..2868425 Burkholderia cenocepacia AU 1054 4093127 YP_622479.1 CDS Bcen_2608 NC_008060.1 2868465 2869355 R KEGG: bur:Bcep18194_A3585 hypothetical protein; hypothetical protein complement(2868465..2869355) Burkholderia cenocepacia AU 1054 4093128 YP_622480.1 CDS Bcen_2609 NC_008060.1 2869445 2870638 R PFAM: methyltransferase small; KEGG: bur:Bcep18194_A3584 methyltransferase; methyltransferase small complement(2869445..2870638) Burkholderia cenocepacia AU 1054 4093129 YP_622481.1 CDS Bcen_2610 NC_008060.1 2870714 2871046 R PFAM: protein of unknown function DUF1508; KEGG: pfl:PFL_1392 hypothetical protein; hypothetical protein complement(2870714..2871046) Burkholderia cenocepacia AU 1054 4093130 YP_622482.1 CDS Bcen_2611 NC_008060.1 2871202 2871696 R KEGG: bur:Bcep18194_A3583 hypothetical protein; hypothetical protein complement(2871202..2871696) Burkholderia cenocepacia AU 1054 4093131 YP_622483.1 CDS Bcen_2612 NC_008060.1 2871978 2872235 D hypothetical protein 2871978..2872235 Burkholderia cenocepacia AU 1054 4093132 YP_622484.1 CDS Bcen_2613 NC_008060.1 2872340 2874508 D PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: bur:Bcep18194_A3582 peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase 2872340..2874508 Burkholderia cenocepacia AU 1054 4093133 YP_622485.1 CDS Bcen_2614 NC_008060.1 2874630 2875550 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3581 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2874630..2875550) Burkholderia cenocepacia AU 1054 4093134 YP_622486.1 CDS Bcen_2615 NC_008060.1 2875702 2876691 D PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_A3580 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase 2875702..2876691 Burkholderia cenocepacia AU 1054 4093135 YP_622487.1 CDS Bcen_2616 NC_008060.1 2876719 2876868 D KEGG: bur:Bcep18194_A3579 hypothetical protein; hypothetical protein 2876719..2876868 Burkholderia cenocepacia AU 1054 4093136 YP_622488.1 CDS Bcen_2617 NC_008060.1 2876912 2877940 R PFAM: Mg2+ transporter protein, CorA-like; KEGG: bur:Bcep18194_A3578 Mg2+ transporter protein, CorA-like; Mg2+ transporter protein, CorA-like complement(2876912..2877940) Burkholderia cenocepacia AU 1054 4093137 YP_622489.1 CDS Bcen_2618 NC_008060.1 2878153 2879157 R KEGG: bur:Bcep18194_A3577 hypothetical protein; hypothetical protein complement(2878153..2879157) Burkholderia cenocepacia AU 1054 4093138 YP_622490.1 CDS Bcen_2619 NC_008060.1 2879279 2880124 D PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: bur:Bcep18194_A3576 hypothetical protein; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins 2879279..2880124 Burkholderia cenocepacia AU 1054 4093139 YP_622491.1 CDS Bcen_2620 NC_008060.1 2880426 2884370 D PFAM: ImcF-related; protein of unknown function DUF1215; KEGG: bur:Bcep18194_A3575 hypothetical protein; ImcF-related 2880426..2884370 Burkholderia cenocepacia AU 1054 4093140 YP_622492.1 CDS Bcen_2621 NC_008060.1 2884367 2885356 D KEGG: bur:Bcep18194_A3574 hypothetical protein; hypothetical protein 2884367..2885356 Burkholderia cenocepacia AU 1054 4093141 YP_622493.1 CDS Bcen_2622 NC_008060.1 2885566 2886309 D PFAM: OmpA/MotB; KEGG: bur:Bcep18194_A3573 outer membrane protein, OmpA/MotB family; OmpA/MotB protein 2885566..2886309 Burkholderia cenocepacia AU 1054 4093142 YP_622494.1 CDS Bcen_2623 NC_008060.1 2886577 2887197 R hypothetical protein complement(2886577..2887197) Burkholderia cenocepacia AU 1054 4093143 YP_622495.1 CDS Bcen_2624 NC_008060.1 2887230 2888099 R hypothetical protein complement(2887230..2888099) Burkholderia cenocepacia AU 1054 4091509 YP_622496.1 CDS Bcen_2625 NC_008060.1 2888276 2888533 D PFAM: OmpA/MotB; KEGG: bur:Bcep18194_A3573 outer membrane protein, OmpA/MotB family; OmpA/MotB protein 2888276..2888533 Burkholderia cenocepacia AU 1054 4091510 YP_622497.1 CDS Bcen_2626 NC_008060.1 2888616 2890877 R KEGG: xoo:XOO3472 hypothetical protein; hypothetical protein complement(2888616..2890877) Burkholderia cenocepacia AU 1054 4091511 YP_622498.1 CDS Bcen_2627 NC_008060.1 2890864 2891799 R hypothetical protein complement(2890864..2891799) Burkholderia cenocepacia AU 1054 4091512 YP_622499.1 CDS Bcen_2628 NC_008060.1 2892019 2892831 R hypothetical protein complement(2892019..2892831) Burkholderia cenocepacia AU 1054 4091513 YP_622500.1 CDS Bcen_2629 NC_008060.1 2892842 2893882 R KEGG: xoo:XOO3511 hypothetical protein; hypothetical protein complement(2892842..2893882) Burkholderia cenocepacia AU 1054 4091514 YP_622501.1 CDS Bcen_2630 NC_008060.1 2893904 2896447 R PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_A3567 rhs element Vgr protein; Rhs element Vgr protein complement(2893904..2896447) Burkholderia cenocepacia AU 1054 4091515 YP_622502.1 CDS Bcen_2631 NC_008060.1 2896514 2897635 R PFAM: ImpA-like; KEGG: bur:Bcep18194_A3566 ImpA-like; ImpA domain-containing protein complement(2896514..2897635) Burkholderia cenocepacia AU 1054 4091516 YP_622503.1 CDS Bcen_2632 NC_008060.1 2897679 2899724 R PFAM: ATPase AAA; ATPase associated with various cellular activities, AAA_5; ATPase AAA; SMART: ATPase; KEGG: bur:Bcep18194_A3565 chaperonin ClpA/B/, ATPase; ATPase AAA complement(2897679..2899724) Burkholderia cenocepacia AU 1054 4091517 YP_622504.1 CDS Bcen_2633 NC_008060.1 2899906 2900394 D KEGG: bpm:BURPS1710b_3637 63 kDa protein; hypothetical protein 2899906..2900394 Burkholderia cenocepacia AU 1054 4091518 YP_622505.1 CDS Bcen_2634 NC_008060.1 2900388 2901404 R PFAM: protein of unknown function DUF1305; KEGG: bur:Bcep18194_A3564 protein of unknown function DUF1305; hypothetical protein complement(2900388..2901404) Burkholderia cenocepacia AU 1054 4091519 YP_622506.1 CDS Bcen_2635 NC_008060.1 2901452 2903287 R PFAM: protein of unknown function DUF879; KEGG: bur:Bcep18194_A3563 protein of unknown function DUF879; hypothetical protein complement(2901452..2903287) Burkholderia cenocepacia AU 1054 4091520 YP_622507.1 CDS Bcen_2636 NC_008060.1 2903364 2903849 R PFAM: protein of unknown function DUF1316; KEGG: bur:Bcep18194_A3562 protein of unknown function DUF1316; hypothetical protein complement(2903364..2903849) Burkholderia cenocepacia AU 1054 4091521 YP_622508.1 CDS Bcen_2637 NC_008060.1 2903912 2904415 R PFAM: protein of unknown function DUF796; KEGG: bur:Bcep18194_A3561 protein of unknown function DUF796; hypothetical protein complement(2903912..2904415) Burkholderia cenocepacia AU 1054 4091522 YP_622509.1 CDS Bcen_2638 NC_008060.1 2904486 2905976 R PFAM: protein of unknown function DUF877; KEGG: bur:Bcep18194_A3560 protein of unknown function DUF877; hypothetical protein complement(2904486..2905976) Burkholderia cenocepacia AU 1054 4091523 YP_622510.1 CDS Bcen_2639 NC_008060.1 2905992 2906507 R PFAM: Uncharacterised conserved protein UCP028301; KEGG: bur:Bcep18194_A3559 uncharacterized conserved protein UCP028301; hypothetical protein complement(2905992..2906507) Burkholderia cenocepacia AU 1054 4091524 YP_622511.1 CDS Bcen_2640 NC_008060.1 2906554 2907189 R PFAM: Tetratricopeptide TPR_2; KEGG: bur:Bcep18194_A3558 TPR repeat protein; hypothetical protein complement(2906554..2907189) Burkholderia cenocepacia AU 1054 4091525 YP_622512.1 CDS Bcen_2641 NC_008060.1 2907562 2908173 D KEGG: bur:Bcep18194_A3557 hypothetical protein; hypothetical protein 2907562..2908173 Burkholderia cenocepacia AU 1054 4091526 YP_622513.1 CDS Bcen_2642 NC_008060.1 2908276 2909622 D PFAM: protein of unknown function DUF876; KEGG: bur:Bcep18194_A3556 protein of unknown function DUF876; hypothetical protein 2908276..2909622 Burkholderia cenocepacia AU 1054 4091527 YP_622514.1 CDS Bcen_2643 NC_008060.1 2909619 2910401 D KEGG: bur:Bcep18194_A3555 hypothetical protein; hypothetical protein 2909619..2910401 Burkholderia cenocepacia AU 1054 4091528 YP_622515.1 CDS Bcen_2644 NC_008060.1 2910488 2910805 R KEGG: bur:Bcep18194_A3554 hypothetical protein; hypothetical protein complement(2910488..2910805) Burkholderia cenocepacia AU 1054 4091529 YP_622516.1 CDS Bcen_2645 NC_008060.1 2911341 2911916 R hypothetical protein complement(2911341..2911916) Burkholderia cenocepacia AU 1054 4091530 YP_622517.1 CDS Bcen_2646 NC_008060.1 2911927 2913678 R PFAM: RHS protein; YD repeat; KEGG: bur:Bcep18194_A3550 rhs family protein; RHS protein complement(2911927..2913678) Burkholderia cenocepacia AU 1054 4091531 YP_622518.1 CDS Bcen_2647 NC_008060.1 2913671 2916475 R PFAM: YD repeat; KEGG: bur:Bcep18194_A3550 rhs family protein; hypothetical protein complement(2913671..2916475) Burkholderia cenocepacia AU 1054 4091532 YP_622519.1 CDS Bcen_2648 NC_008060.1 2916636 2919827 R PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_A3549 rhs element Vgr protein; Rhs element Vgr protein complement(2916636..2919827) Burkholderia cenocepacia AU 1054 4091533 YP_622520.1 CDS Bcen_2649 NC_008060.1 2920184 2920984 D PFAM: extracellular solute-binding protein, family 3; SMART: Ionotropic glutamate receptor; KEGG: bur:Bcep18194_A3548 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein 2920184..2920984 Burkholderia cenocepacia AU 1054 4091534 YP_622521.1 CDS Bcen_2650 NC_008060.1 2921094 2921297 R KEGG: bur:Bcep18194_A3547 hypothetical protein; hypothetical protein complement(2921094..2921297) Burkholderia cenocepacia AU 1054 4091535 YP_622522.1 CDS Bcen_2651 NC_008060.1 2922322 2922966 R hypothetical protein complement(2922322..2922966) Burkholderia cenocepacia AU 1054 4091536 YP_622523.1 CDS Bcen_2652 NC_008060.1 2923030 2923914 R KEGG: dsy:DSY0719 hypothetical protein; hypothetical protein complement(2923030..2923914) Burkholderia cenocepacia AU 1054 4091537 YP_622524.1 CDS Bcen_2653 NC_008060.1 2924028 2925644 R KEGG: bce:BC1912 phage protein; phage protein complement(2924028..2925644) Burkholderia cenocepacia AU 1054 4091538 YP_622525.1 CDS Bcen_2654 NC_008060.1 2927028 2928290 D PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902; KEGG: bte:BTH_II1545 ISBma3, transposase; transposase IS116/IS110/IS902 2927028..2928290 Burkholderia cenocepacia AU 1054 4091539 YP_622526.1 CDS Bcen_2655 NC_008060.1 2928837 2929562 R KEGG: pfo:Pfl_3031 hypothetical protein; hypothetical protein complement(2928837..2929562) Burkholderia cenocepacia AU 1054 4091540 YP_622527.1 CDS Bcen_2656 NC_008060.1 2929802 2930530 D hypothetical protein 2929802..2930530 Burkholderia cenocepacia AU 1054 4091541 YP_622528.1 CDS Bcen_2657 NC_008060.1 2930870 2931325 R hypothetical protein complement(2930870..2931325) Burkholderia cenocepacia AU 1054 4091542 YP_622529.1 CDS Bcen_2658 NC_008060.1 2931557 2932468 R PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: bhe:BH15680 TrwI1 protein; TrbL/VirB6 plasmid conjugal transfer protein complement(2931557..2932468) Burkholderia cenocepacia AU 1054 4091543 YP_622530.1 CDS Bcen_2659 NC_008060.1 2932479 2932718 R hypothetical protein complement(2932479..2932718) Burkholderia cenocepacia AU 1054 4091544 YP_622531.1 CDS Bcen_2660 NC_008060.1 2933023 2933757 R hypothetical protein complement(2933023..2933757) Burkholderia cenocepacia AU 1054 4091545 YP_622532.1 CDS Bcen_2661 NC_008060.1 2934382 2935425 R PFAM: phage integrase; KEGG: xoo:XOO0599 site-specific recombinase, phage integrase family; phage integrase complement(2934382..2935425) Burkholderia cenocepacia AU 1054 4091546 YP_622533.1 CDS Bcen_2662 NC_008060.1 2935617 2936138 R PFAM: Stringent starvation protein B; KEGG: bur:Bcep18194_A3543 stringent starvation protein B; ClpXP protease specificity-enhancing factor complement(2935617..2936138) Burkholderia cenocepacia AU 1054 4091568 YP_622534.1 CDS Bcen_2663 NC_008060.1 2936210 2936821 R PFAM: glutaredoxin; glutathione S-transferase-like; KEGG: bur:Bcep18194_A3542 glutathione S-transferase; glutathione S-transferase complement(2936210..2936821) Burkholderia cenocepacia AU 1054 4091569 YP_622535.1 CDS Bcen_2664 NC_008060.1 2936916 2937674 R PFAM: cytochrome c1; KEGG: bur:Bcep18194_A3541 cytochrome c1; cytochrome c1 complement(2936916..2937674) Burkholderia cenocepacia AU 1054 4091570 YP_622536.1 CDS Bcen_2665 NC_008060.1 2937696 2939078 R PFAM: cytochrome b/b6-like; KEGG: bur:Bcep18194_A3540 cytochrome b/b6-like; cytochrome b/b6-like protein complement(2937696..2939078) Burkholderia cenocepacia AU 1054 4091571 YP_622537.1 CDS Bcen_2666 NC_008060.1 2939078 2939698 R KEGG: bur:Bcep18194_A3539 ubiquinol-cytochrome c reductase, iron-sulfur subunit TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] region; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(2939078..2939698) Burkholderia cenocepacia AU 1054 4091572 YP_622538.1 CDS Bcen_2667 NC_008060.1 2939917 2940663 R PFAM: protein of unknown function DUF34; KEGG: bur:Bcep18194_A3538 protein of unknown function DUF34; hypothetical protein complement(2939917..2940663) Burkholderia cenocepacia AU 1054 4091573 YP_622539.1 CDS Bcen_2668 NC_008060.1 2940685 2941890 D PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: bur:Bcep18194_A3537 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap 2940685..2941890 Burkholderia cenocepacia AU 1054 4091574 YP_622540.1 CDS Bcen_2669 NC_008060.1 2942096 2942884 R TIGRFAM: Sec-independent protein translocase TatC; PFAM: Sec-independent periplasmic protein translocase; KEGG: bur:Bcep18194_A3536 sec-independent periplasmic protein translocase; Sec-independent protein translocase TatC complement(2942096..2942884) Burkholderia cenocepacia AU 1054 4091575 YP_622541.1 CDS tatB NC_008060.1 2942926 2943465 R TIGRFAM: twin-arginine translocation protein TatB; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: bur:Bcep18194_A3535 twin-arginine translocation protein TatB; sec-independent translocase complement(2942926..2943465) Burkholderia cenocepacia AU 1054 4091576 YP_622542.1 CDS tatA NC_008060.1 2943492 2943722 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(2943492..2943722) Burkholderia cenocepacia AU 1054 4091577 YP_622543.1 CDS Bcen_2672 NC_008060.1 2943816 2944181 R PFAM: histidine triad (HIT) protein; KEGG: bur:Bcep18194_A3533 histidine triad (HIT) protein; histidine triad (HIT) protein complement(2943816..2944181) Burkholderia cenocepacia AU 1054 4091578 YP_622544.1 CDS Bcen_2673 NC_008060.1 2944213 2944605 R KEGG: bur:Bcep18194_A3532 membrane protein; membrane protein complement(2944213..2944605) Burkholderia cenocepacia AU 1054 4091579 YP_622545.1 CDS hisE NC_008060.1 2944676 2945041 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(2944676..2945041) Burkholderia cenocepacia AU 1054 4091580 YP_622546.1 CDS hisI NC_008060.1 2945038 2945454 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(2945038..2945454) Burkholderia cenocepacia AU 1054 4091581 YP_622547.1 CDS Bcen_2676 NC_008060.1 2945454 2946227 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(2945454..2946227) Burkholderia cenocepacia AU 1054 4091582 YP_622548.1 CDS Bcen_2677 NC_008060.1 2946334 2947089 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(2946334..2947089) Burkholderia cenocepacia AU 1054 4091583 YP_622549.1 CDS hisH NC_008060.1 2947253 2947894 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(2947253..2947894) Burkholderia cenocepacia AU 1054 4091584 YP_622550.1 CDS Bcen_2679 NC_008060.1 2947891 2948511 R PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: bur:Bcep18194_A3526 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-related proteins complement(2947891..2948511) Burkholderia cenocepacia AU 1054 4091585 YP_622551.1 CDS hisB NC_008060.1 2948572 2949159 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(2948572..2949159) Burkholderia cenocepacia AU 1054 4091586 YP_622552.1 CDS Bcen_2681 NC_008060.1 2949225 2950298 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(2949225..2950298) Burkholderia cenocepacia AU 1054 4091587 YP_622553.1 CDS hisD NC_008060.1 2950442 2951758 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(2950442..2951758) Burkholderia cenocepacia AU 1054 4091588 YP_622554.1 CDS hisG NC_008060.1 2951783 2952436 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(2951783..2952436) Burkholderia cenocepacia AU 1054 4091589 YP_622555.1 CDS Bcen_2684 NC_008060.1 2952433 2953782 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2952433..2953782) Burkholderia cenocepacia AU 1054 4091590 YP_622556.1 CDS Bcen_2685 NC_008060.1 2953797 2954036 R PFAM: BolA-like protein; KEGG: bur:Bcep18194_A3520 BolA-like protein; BolA-like protein complement(2953797..2954036) Burkholderia cenocepacia AU 1054 4091591 YP_622557.1 CDS Bcen_2686 NC_008060.1 2954092 2954913 R PFAM: ABC transporter; KEGG: bur:Bcep18194_A3519 ABC efflux pump, inner membrane subunit; ABC transporter complement(2954092..2954913) Burkholderia cenocepacia AU 1054 4091592 YP_622558.1 CDS Bcen_2687 NC_008060.1 2954910 2955836 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A3518 ABC transporter, ATPase subunit; ABC transporter complement(2954910..2955836) Burkholderia cenocepacia AU 1054 4091593 YP_622559.1 CDS Bcen_2688 NC_008060.1 2956029 2956304 R KEGG: bur:Bcep18194_A3517 hypothetical protein; hypothetical protein complement(2956029..2956304) Burkholderia cenocepacia AU 1054 4091594 YP_622560.1 CDS Bcen_2689 NC_008060.1 2956301 2956945 R PFAM: toluene tolerance; KEGG: bur:Bcep18194_A3516 toluene tolerance; toluene tolerance complement(2956301..2956945) Burkholderia cenocepacia AU 1054 4091595 YP_622561.1 CDS Bcen_2690 NC_008060.1 2957042 2958004 R PFAM: VacJ-like lipoprotein; KEGG: bur:Bcep18194_A3515 VacJ-like lipoprotein; VacJ-like lipoprotein complement(2957042..2958004) Burkholderia cenocepacia AU 1054 4091596 YP_622562.1 CDS Bcen_2691 NC_008060.1 2958036 2958605 R PFAM: Mammalian cell entry related; KEGG: bur:Bcep18194_A3514 ABC transporter, inner membrane subunit; hypothetical protein complement(2958036..2958605) Burkholderia cenocepacia AU 1054 4091597 YP_622563.1 CDS Bcen_2692 NC_008060.1 2958630 2959397 R PFAM: protein of unknown function DUF140; KEGG: bur:Bcep18194_A3513 ABC transporter, inner membrane subunit; hypothetical protein complement(2958630..2959397) Burkholderia cenocepacia AU 1054 4091598 YP_622564.1 CDS Bcen_2693 NC_008060.1 2959394 2960215 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A3512 ABC transporter, ATPase subunit; ABC transporter complement(2959394..2960215) Burkholderia cenocepacia AU 1054 4091599 YP_622565.1 CDS Bcen_2694 NC_008060.1 2960300 2961427 R KEGG: bur:Bcep18194_A3511 thiamine-phosphate diphosphorylase TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(2960300..2961427) Burkholderia cenocepacia AU 1054 4091600 YP_622566.1 CDS thiG NC_008060.1 2961424 2962239 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(2961424..2962239) Burkholderia cenocepacia AU 1054 4091601 YP_622567.1 CDS Bcen_2696 NC_008060.1 2962278 2962475 R with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS complement(2962278..2962475) Burkholderia cenocepacia AU 1054 4091602 YP_622568.1 CDS Bcen_2697 NC_008060.1 2962508 2963644 R PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3508 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2962508..2963644) Burkholderia cenocepacia AU 1054 4091603 YP_622569.1 CDS Bcen_2698 NC_008060.1 2964264 2966033 D PFAM: ABC transporter related; ABC transporter; SMART: ATPase; KEGG: bur:Bcep18194_A3507 ABC transporter, fused ATPase and inner membrane subunits; ABC transporter 2964264..2966033 Burkholderia cenocepacia AU 1054 4091450 YP_622570.1 CDS Bcen_2699 NC_008060.1 2966030 2966806 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A3506 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2966030..2966806 Burkholderia cenocepacia AU 1054 4091451 YP_622571.1 CDS Bcen_2700 NC_008060.1 2966935 2968197 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3505 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 2966935..2968197 Burkholderia cenocepacia AU 1054 4091452 YP_622572.1 CDS Bcen_2701 NC_008060.1 2968223 2969524 D PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3504 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 2968223..2969524 Burkholderia cenocepacia AU 1054 4091453 YP_622573.1 CDS Bcen_2702 NC_008060.1 2969598 2970182 R PFAM: 2',5' RNA ligase; KEGG: bur:Bcep18194_A3503 2',5' RNA ligase; 2',5' RNA ligase complement(2969598..2970182) Burkholderia cenocepacia AU 1054 4091454 YP_622574.1 CDS Bcen_2703 NC_008060.1 2970179 2971672 R TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bur:Bcep18194_A3502 sodium/alanine symporter; amino acid carrier protein complement(2970179..2971672) Burkholderia cenocepacia AU 1054 4091455 YP_622575.2 CDS gltD NC_008060.1 2972018 2973484 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(2972018..2973484) Burkholderia cenocepacia AU 1054 4091456 YP_622576.1 CDS Bcen_2705 NC_008060.1 2973412 2978391 R PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit-like; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bur:Bcep18194_A3499 glutamate synthase (ferredoxin); glutamate synthase complement(2973412..2978391) Burkholderia cenocepacia AU 1054 4091457 YP_622577.1 CDS Bcen_2706 NC_008060.1 2978560 2979273 R PFAM: protein of unknown function DUF1568; KEGG: bur:Bcep18194_A3498 protein of unknown function DUF1568; hypothetical protein complement(2978560..2979273) Burkholderia cenocepacia AU 1054 4091458 YP_622578.1 CDS Bcen_2707 NC_008060.1 2979466 2980197 D PFAM: OmpW; KEGG: bur:Bcep18194_A3497 OmpW family protein; OmpW 2979466..2980197 Burkholderia cenocepacia AU 1054 4091459 YP_622579.1 CDS ugpQ NC_008060.1 2980376 2981146 R hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase complement(2980376..2981146) Burkholderia cenocepacia AU 1054 4091460 YP_622580.1 CDS ugpC NC_008060.1 2981175 2982260 R part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit complement(2981175..2982260) Burkholderia cenocepacia AU 1054 4091461 YP_622581.1 CDS Bcen_2710 NC_008060.1 2982291 2983136 R with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein complement(2982291..2983136) Burkholderia cenocepacia AU 1054 4091462 YP_622582.1 CDS Bcen_2711 NC_008060.1 2983133 2984017 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A3493 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2983133..2984017) Burkholderia cenocepacia AU 1054 4091463 YP_622583.1 CDS Bcen_2712 NC_008060.1 2984114 2985445 R with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein complement(2984114..2985445) Burkholderia cenocepacia AU 1054 4091464 YP_622584.1 CDS Bcen_2713 NC_008060.1 2985534 2986742 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(2985534..2986742) Burkholderia cenocepacia AU 1054 4091465 YP_622585.1 CDS aroB NC_008060.1 2986784 2987863 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(2986784..2987863) Burkholderia cenocepacia AU 1054 4091466 YP_622586.1 CDS aroK NC_008060.1 2987860 2988369 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(2987860..2988369) Burkholderia cenocepacia AU 1054 4091467 YP_622587.1 CDS Bcen_2716 NC_008060.1 2988455 2989570 R TIGRFAM: Type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW-like; Secretin/TonB, short N-terminal; KEGG: bur:Bcep18194_A3488 type II and III secretion system protein; Type IV pilus secretin PilQ complement(2988455..2989570) Burkholderia cenocepacia AU 1054 4091468 YP_622588.1 CDS Bcen_2717 NC_008060.1 2990085 2990951 R KEGG: bte:BTH_I3026 hypothetical protein; hypothetical protein complement(2990085..2990951) Burkholderia cenocepacia AU 1054 4091469 YP_622589.1 CDS Bcen_2718 NC_008060.1 2990948 2991592 R PFAM: Fimbrial assembly; KEGG: bpm:BURPS1710b_3732 membrane protein; fimbrial assembly complement(2990948..2991592) Burkholderia cenocepacia AU 1054 4091470 YP_622590.1 CDS Bcen_2719 NC_008060.1 2991592 2992515 R KEGG: bpm:BURPS1710b_3733 hypothetical protein; hypothetical protein complement(2991592..2992515) Burkholderia cenocepacia AU 1054 4091471 YP_622591.1 CDS Bcen_2720 NC_008060.1 2992737 2995130 D KEGG: bur:Bcep18194_A3486 penicillin-binding protein 1A TIGRFAM: Penicillin-binding protein 1A; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; penicillin-binding protein 1A 2992737..2995130 Burkholderia cenocepacia AU 1054 4091472 YP_622592.1 CDS cyaY NC_008060.1 2995212 2995538 R defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein complement(2995212..2995538) Burkholderia cenocepacia AU 1054 4091473 YP_622593.1 CDS Bcen_2722 NC_008060.1 2995575 2995853 D KEGG: bpm:BURPS1710b_3736 lipoprotein; lipoprotein 2995575..2995853 Burkholderia cenocepacia AU 1054 4091474 YP_622594.1 CDS Bcen_2723 NC_008060.1 2995949 2996635 R in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ complement(2995949..2996635) Burkholderia cenocepacia AU 1054 4091475 YP_622595.1 CDS Bcen_2724 NC_008060.1 2996656 2997651 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY complement(2996656..2997651) Burkholderia cenocepacia AU 1054 4091476 YP_622596.1 CDS Bcen_2725 NC_008060.1 2997811 2999001 R PFAM: cytochrome c assembly protein; KEGG: bur:Bcep18194_A3481 cytochrome c assembly protein; cytochrome c assembly protein complement(2997811..2999001) Burkholderia cenocepacia AU 1054 4091477 YP_622597.1 CDS Bcen_2726 NC_008060.1 2999006 3001219 R PFAM: ResB-like; KEGG: bur:Bcep18194_A3480 ResB-like/cytochrome c biosynthesis protein; ResB-like protein complement(2999006..3001219) Burkholderia cenocepacia AU 1054 4091478 YP_622598.1 CDS Bcen_2727 NC_008060.1 3001443 3002096 R PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_A3479 cytochrome c, class I; cytochrome c, class I complement(3001443..3002096) Burkholderia cenocepacia AU 1054 4091479 YP_622599.1 CDS engB NC_008060.1 3002312 3002971 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3002312..3002971 Burkholderia cenocepacia AU 1054 4091480 YP_622600.1 CDS Bcen_2729 NC_008060.1 3003224 3004222 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3003224..3004222 Burkholderia cenocepacia AU 1054 4091481 YP_622601.1 CDS Bcen_2730 NC_008060.1 3004351 3006198 R PFAM: cytochrome c biogenesis protein, transmembrane region; Thioredoxin domain; KEGG: bur:Bcep18194_A3476 protein-disulfide reductase; protein-disulfide reductase complement(3004351..3006198) Burkholderia cenocepacia AU 1054 4091482 YP_622602.1 CDS Bcen_2731 NC_008060.1 3006191 3006514 R PFAM: CutA1 divalent ion tolerance protein; KEGG: bur:Bcep18194_A3475 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein complement(3006191..3006514) Burkholderia cenocepacia AU 1054 4091483 YP_622603.1 CDS rplQ NC_008060.1 3006717 3007112 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(3006717..3007112) Burkholderia cenocepacia AU 1054 4091484 YP_622604.1 CDS Bcen_2733 NC_008060.1 3007262 3008239 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(3007262..3008239) Burkholderia cenocepacia AU 1054 4091485 YP_622605.1 CDS rpsD NC_008060.1 3008364 3008987 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3008364..3008987) Burkholderia cenocepacia AU 1054 4091486 YP_622606.1 CDS Bcen_2735 NC_008060.1 3009142 3009543 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(3009142..3009543) Burkholderia cenocepacia AU 1054 4091487 YP_622607.1 CDS rpsM NC_008060.1 3009572 3009937 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(3009572..3009937) Burkholderia cenocepacia AU 1054 4091488 YP_622608.1 CDS rpmJ NC_008060.1 3009976 3010092 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(3009976..3010092) Burkholderia cenocepacia AU 1054 4092436 YP_622609.1 CDS infA NC_008060.1 3010113 3010331 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(3010113..3010331) Burkholderia cenocepacia AU 1054 4092437 YP_622610.1 CDS secY NC_008060.1 3010339 3011688 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(3010339..3011688) Burkholderia cenocepacia AU 1054 4092438 YP_622611.1 CDS rplO NC_008060.1 3011731 3012165 R late assembly protein; 50S ribosomal protein L15 complement(3011731..3012165) Burkholderia cenocepacia AU 1054 4092439 YP_622612.1 CDS rpmD NC_008060.1 3012192 3012374 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(3012192..3012374) Burkholderia cenocepacia AU 1054 4092440 YP_622613.1 CDS rpsE NC_008060.1 3012390 3012908 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(3012390..3012908) Burkholderia cenocepacia AU 1054 4092441 YP_622614.1 CDS rplR NC_008060.1 3012923 3013288 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(3012923..3013288) Burkholderia cenocepacia AU 1054 4092442 YP_622615.1 CDS rplF NC_008060.1 3013301 3013831 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(3013301..3013831) Burkholderia cenocepacia AU 1054 4092443 YP_622616.1 CDS rpsH NC_008060.1 3013850 3014245 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(3013850..3014245) Burkholderia cenocepacia AU 1054 4092444 YP_622617.1 CDS rpsN NC_008060.1 3014260 3014565 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(3014260..3014565) Burkholderia cenocepacia AU 1054 4092445 YP_622618.1 CDS rplE NC_008060.1 3014573 3015112 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(3014573..3015112) Burkholderia cenocepacia AU 1054 4092446 YP_622619.1 CDS rplX NC_008060.1 3015129 3015437 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(3015129..3015437) Burkholderia cenocepacia AU 1054 4092447 YP_622620.2 CDS rplN NC_008060.1 3015447 3015815 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(3015447..3015815) Burkholderia cenocepacia AU 1054 4092448 YP_622621.1 CDS rpsQ NC_008060.1 3016124 3016396 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(3016124..3016396) Burkholderia cenocepacia AU 1054 4092449 YP_622622.1 CDS Bcen_2751 NC_008060.1 3016393 3016587 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(3016393..3016587) Burkholderia cenocepacia AU 1054 4092450 YP_622623.1 CDS rplP NC_008060.1 3016597 3017013 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(3016597..3017013) Burkholderia cenocepacia AU 1054 4092451 YP_622624.1 CDS rpsC NC_008060.1 3017016 3017816 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(3017016..3017816) Burkholderia cenocepacia AU 1054 4092452 YP_622625.1 CDS rplV NC_008060.1 3017828 3018157 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(3017828..3018157) Burkholderia cenocepacia AU 1054 4092453 YP_622626.1 CDS rpsS NC_008060.1 3018170 3018445 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(3018170..3018445) Burkholderia cenocepacia AU 1054 4092454 YP_622627.1 CDS rplB NC_008060.1 3018456 3019283 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(3018456..3019283) Burkholderia cenocepacia AU 1054 4092455 YP_622628.1 CDS rplW NC_008060.1 3019286 3019600 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(3019286..3019600) Burkholderia cenocepacia AU 1054 4092456 YP_622629.1 CDS rplD NC_008060.1 3019597 3020217 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(3019597..3020217) Burkholderia cenocepacia AU 1054 4092457 YP_622630.2 CDS rplC NC_008060.1 3020217 3020867 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(3020217..3020867) Burkholderia cenocepacia AU 1054 4092458 YP_622631.1 CDS rpsJ NC_008060.1 3021046 3021357 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(3021046..3021357) Burkholderia cenocepacia AU 1054 4092459 YP_622632.1 CDS Bcen_2761 NC_008060.1 3021645 3022835 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3021645..3022835) Burkholderia cenocepacia AU 1054 4092460 YP_622633.1 CDS Bcen_2762 NC_008060.1 3022877 3024979 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3022877..3024979) Burkholderia cenocepacia AU 1054 4092461 YP_622634.1 CDS Bcen_2763 NC_008060.1 3025103 3025573 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3025103..3025573) Burkholderia cenocepacia AU 1054 4092462 YP_622635.1 CDS rpsL NC_008060.1 3025746 3026126 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(3025746..3026126) Burkholderia cenocepacia AU 1054 4092463 YP_622636.1 CDS Bcen_2765 NC_008060.1 3026353 3028200 R TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase-like; HRDC; DEAD/DEAH box helicase; KEGG: bur:Bcep18194_A3441 ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase RecQ complement(3026353..3028200) Burkholderia cenocepacia AU 1054 4092464 YP_622637.1 CDS Bcen_2766 NC_008060.1 3028478 3032719 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(3028478..3032719) Burkholderia cenocepacia AU 1054 4092465 YP_622638.1 CDS rpoB NC_008060.1 3032741 3036847 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3032741..3036847) Burkholderia cenocepacia AU 1054 4092466 YP_622639.1 CDS rplL NC_008060.1 3037229 3037603 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(3037229..3037603) Burkholderia cenocepacia AU 1054 4092467 YP_622640.1 CDS rplJ NC_008060.1 3037667 3038164 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3037667..3038164) Burkholderia cenocepacia AU 1054 4092468 YP_622641.1 CDS rplA NC_008060.1 3038473 3039171 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(3038473..3039171) Burkholderia cenocepacia AU 1054 4092469 YP_622642.1 CDS rplK NC_008060.1 3039172 3039603 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3039172..3039603) Burkholderia cenocepacia AU 1054 4092470 YP_622643.1 CDS nusG NC_008060.1 3039745 3040302 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(3039745..3040302) Burkholderia cenocepacia AU 1054 4092471 YP_622644.1 CDS secE NC_008060.1 3040304 3040684 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(3040304..3040684) Burkholderia cenocepacia AU 1054 4092472 YP_622645.1 CDS Bcen_2774 NC_008060.1 3040862 3042052 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3040862..3042052) Burkholderia cenocepacia AU 1054 4092405 YP_622646.1 CDS Bcen_2775 NC_008060.1 3050245 3051510 R PFAM: lipolytic enzyme, G-D-S-L; KEGG: bur:Bcep18194_A3430 lipolytic enzyme, G-D-S-L; lipolytic enzyme, G-D-S-L complement(3050245..3051510) Burkholderia cenocepacia AU 1054 4092414 YP_622647.1 CDS paaA NC_008060.1 3051717 3052715 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 3051717..3052715 Burkholderia cenocepacia AU 1054 4092415 YP_622648.1 CDS paaB NC_008060.1 3052752 3053036 D with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 3052752..3053036 Burkholderia cenocepacia AU 1054 4092416 YP_622649.1 CDS Bcen_2778 NC_008060.1 3053047 3053850 D TIGRFAM: Phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic; KEGG: bur:Bcep18194_A3427 phenylacetate-CoA oxygenase, PaaI subunit; phenylacetate-CoA oxygenase subunit PaaI 3053047..3053850 Burkholderia cenocepacia AU 1054 4092417 YP_622650.1 CDS Bcen_2779 NC_008060.1 3053876 3054439 D TIGRFAM: Phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: bur:Bcep18194_A3426 phenylacetate-CoA oxygenase, PaaJ subunit; phenylacetate-CoA oxygenase subunit PaaJ 3053876..3054439 Burkholderia cenocepacia AU 1054 4092418 YP_622651.1 CDS Bcen_2780 NC_008060.1 3054442 3055530 D TIGRFAM: Phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: bur:Bcep18194_A3425 phenylacetate-CoA oxygenase/reductase, PaaK subunit; phenylacetate-CoA oxygenase/reductase subunit PaaK 3054442..3055530 Burkholderia cenocepacia AU 1054 4092419 YP_622652.1 CDS Bcen_2781 NC_008060.1 3055660 3056481 D KEGG: bur:Bcep18194_A3424 hypothetical protein; hypothetical protein 3055660..3056481 Burkholderia cenocepacia AU 1054 4092420 YP_622653.1 CDS Bcen_2782 NC_008060.1 3056498 3057103 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_A3423 transcriptional regulator, TetR family; TetR family transcriptional regulator 3056498..3057103 Burkholderia cenocepacia AU 1054 4092421 YP_622654.1 CDS Bcen_2783 NC_008060.1 3057337 3057984 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A3422 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3057337..3057984 Burkholderia cenocepacia AU 1054 4092422 YP_622655.1 CDS Bcen_2784 NC_008060.1 3058060 3058584 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_A3421 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(3058060..3058584) Burkholderia cenocepacia AU 1054 4092423 YP_622656.1 CDS Bcen_2785 NC_008060.1 3058799 3059896 D KEGG: bur:Bcep18194_A3420 4-hydroxyphenylpyruvate dioxygenase TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 3058799..3059896 Burkholderia cenocepacia AU 1054 4092424 YP_622657.1 CDS Bcen_2786 NC_008060.1 3060034 3060294 R KEGG: bur:Bcep18194_A3419 hypothetical protein; hypothetical protein complement(3060034..3060294) Burkholderia cenocepacia AU 1054 4092425 YP_622658.1 CDS Bcen_2787 NC_008060.1 3060559 3064149 D Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 3060559..3064149 Burkholderia cenocepacia AU 1054 4092426 YP_622659.1 CDS Bcen_2788 NC_008060.1 3064301 3066571 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(3064301..3066571) Burkholderia cenocepacia AU 1054 4092427 YP_622660.1 CDS pyrE NC_008060.1 3067031 3067717 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 3067031..3067717 Burkholderia cenocepacia AU 1054 4092428 YP_622661.1 CDS Bcen_2790 NC_008060.1 3067958 3068554 D TIGRFAM: YbhB and YbcL; PFAM: PEBP; KEGG: bur:Bcep18194_A3415 phospholipid-binding protein, YbhB/YbcL-like; YbhB and YbcL 3067958..3068554 Burkholderia cenocepacia AU 1054 4092429 YP_622662.1 CDS Bcen_2791 NC_008060.1 3068766 3069338 D PFAM: flavodoxin/nitric oxide synthase; KEGG: bur:Bcep18194_A3414 flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase 3068766..3069338 Burkholderia cenocepacia AU 1054 4092430 YP_622663.1 CDS Bcen_2792 NC_008060.1 3069434 3070456 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 3069434..3070456 Burkholderia cenocepacia AU 1054 4092431 YP_622664.1 CDS Bcen_2793 NC_008060.1 3070928 3072313 D KEGG: bur:Bcep18194_A3412 hypothetical protein; hypothetical protein 3070928..3072313 Burkholderia cenocepacia AU 1054 4092432 YP_622665.1 CDS Bcen_2794 NC_008060.1 3072493 3073704 D KEGG: bur:Bcep18194_A3411 hypothetical protein; hypothetical protein 3072493..3073704 Burkholderia cenocepacia AU 1054 4092433 YP_622666.1 CDS Bcen_2795 NC_008060.1 3073723 3074556 D PFAM: OmpW; KEGG: bur:Bcep18194_A3410 OmpW family protein; OmpW 3073723..3074556 Burkholderia cenocepacia AU 1054 4092434 YP_622667.1 CDS Bcen_2796 NC_008060.1 3074741 3075670 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3409 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3074741..3075670) Burkholderia cenocepacia AU 1054 4092435 YP_622668.1 CDS Bcen_2797 NC_008060.1 3075768 3077051 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3408 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 3075768..3077051 Burkholderia cenocepacia AU 1054 4091683 YP_622669.1 CDS Bcen_2798 NC_008060.1 3077183 3077818 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_A3407 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA complement(3077183..3077818) Burkholderia cenocepacia AU 1054 4091684 YP_622670.1 CDS Bcen_2799 NC_008060.1 3077892 3078761 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A3406 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase complement(3077892..3078761) Burkholderia cenocepacia AU 1054 4091685 YP_622671.1 CDS Bcen_2800 NC_008060.1 3078858 3079637 D PFAM: protein of unknown function DUF82; KEGG: bur:Bcep18194_A3405 protein of unknown function DUF82; hypothetical protein 3078858..3079637 Burkholderia cenocepacia AU 1054 4091686 YP_622672.1 CDS Bcen_2801 NC_008060.1 3079717 3080082 R KEGG: bur:Bcep18194_A3404 hypothetical protein; hypothetical protein complement(3079717..3080082) Burkholderia cenocepacia AU 1054 4091687 YP_622673.1 CDS Bcen_2802 NC_008060.1 3080309 3081514 D PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_A3403 secretion protein HlyD family; secretion protein HlyD 3080309..3081514 Burkholderia cenocepacia AU 1054 4091688 YP_622674.1 CDS Bcen_2803 NC_008060.1 3081520 3082218 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A3402 ABC efflux pump, ATPase subunit; ABC transporter 3081520..3082218 Burkholderia cenocepacia AU 1054 4091689 YP_622675.1 CDS Bcen_2804 NC_008060.1 3082240 3083394 D PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_A3401 ABC efflux pump, inner membrane subunit; hypothetical protein 3082240..3083394 Burkholderia cenocepacia AU 1054 4091690 YP_622676.1 CDS Bcen_2805 NC_008060.1 3083403 3084569 D PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_A3400 ABC efflux pump, inner membrane subunit; hypothetical protein 3083403..3084569 Burkholderia cenocepacia AU 1054 4091691 YP_622677.1 CDS Bcen_2806 NC_008060.1 3084583 3085920 R PFAM: Carotenoid oxygenase; KEGG: bur:Bcep18194_A3399 retinal pigment epithelial membrane protein; carotenoid oxygenase complement(3084583..3085920) Burkholderia cenocepacia AU 1054 4091692 YP_622678.1 CDS Bcen_2807 NC_008060.1 3085936 3086568 R KEGG: bur:Bcep18194_A3398 hypothetical protein; hypothetical protein complement(3085936..3086568) Burkholderia cenocepacia AU 1054 4091693 YP_622679.1 CDS Bcen_2808 NC_008060.1 3086695 3087459 R PFAM: glutathione S-transferase-like; KEGG: pae:PA1466 hypothetical protein; glutathione S-transferase complement(3086695..3087459) Burkholderia cenocepacia AU 1054 4091694 YP_622680.1 CDS Bcen_2809 NC_008060.1 3087466 3088443 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sme:SMc01570 transcription regulator protein; LysR family transcriptional regulator 3087466..3088443 Burkholderia cenocepacia AU 1054 4091695 YP_622681.1 CDS Bcen_2810 NC_008060.1 3088659 3089999 D TIGRFAM: D-galactonate transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3397 D-galactonate transporter; D-galactonate transporter 3088659..3089999 Burkholderia cenocepacia AU 1054 4091696 YP_622682.1 CDS Bcen_2811 NC_008060.1 3090062 3091459 D KEGG: bur:Bcep18194_A3396 glucarate dehydratase; glucarate dehydratase 3090062..3091459 Burkholderia cenocepacia AU 1054 4091697 YP_622683.1 CDS Bcen_2812 NC_008060.1 3091585 3091896 D KEGG: bur:Bcep18194_A3395 hypothetical protein; hypothetical protein 3091585..3091896 Burkholderia cenocepacia AU 1054 4091698 YP_622684.1 CDS Bcen_2813 NC_008060.1 3092109 3092462 R PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_A3394 cytochrome c, class I; cytochrome c, class I complement(3092109..3092462) Burkholderia cenocepacia AU 1054 4091700 YP_622685.1 CDS Bcen_2814 NC_008060.1 3092459 3093259 R PFAM: transport-associated; KEGG: bur:Bcep18194_A3393 periplasmic or secreted lipoprotein; transport-associated complement(3092459..3093259) Burkholderia cenocepacia AU 1054 4091701 YP_622686.1 CDS Bcen_2815 NC_008060.1 3093277 3093861 R KEGG: bur:Bcep18194_A3392 phosphoheptose isomerase; phosphoheptose isomerase complement(3093277..3093861) Burkholderia cenocepacia AU 1054 4091702 YP_622687.1 CDS Bcen_2816 NC_008060.1 3093998 3094426 R PFAM: protein of unknown function UPF0102; KEGG: bur:Bcep18194_A3391 protein of unknown function UPF0102; hypothetical protein complement(3093998..3094426) Burkholderia cenocepacia AU 1054 4091703 YP_622688.1 CDS Bcen_2817 NC_008060.1 3094530 3095360 D TIGRFAM: Protein of unknown function UPF0011; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bur:Bcep18194_A3390 methyltransferase; hypothetical protein 3094530..3095360 Burkholderia cenocepacia AU 1054 4091704 YP_622689.1 CDS Bcen_2818 NC_008060.1 3095468 3096835 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific; KEGG: sme:SMb21167 reverse transcriptasematurase protein; RNA-directed DNA polymerase complement(3095468..3096835) Burkholderia cenocepacia AU 1054 4091705 YP_622690.1 CDS Bcen_2819 NC_008060.1 3096906 3097235 R hypothetical protein complement(3096906..3097235) Burkholderia cenocepacia AU 1054 4091706 YP_622691.1 CDS Bcen_2820 NC_008060.1 3097305 3097946 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: bur:Bcep18194_A3389 rare lipoprotein A; rare lipoprotein A complement(3097305..3097946) Burkholderia cenocepacia AU 1054 4091707 YP_622692.1 CDS Bcen_2821 NC_008060.1 3098503 3099216 D PFAM: beta-lactamase-like; KEGG: bur:Bcep18194_A3388 beta-lactamase-like; beta-lactamase-like protein 3098503..3099216 Burkholderia cenocepacia AU 1054 4091708 YP_622693.1 CDS Bcen_2822 NC_008060.1 3099213 3099872 D KEGG: bur:Bcep18194_A3387 hypothetical protein; hypothetical protein 3099213..3099872 Burkholderia cenocepacia AU 1054 4091709 YP_622694.1 CDS Bcen_2823 NC_008060.1 3099952 3100422 D PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_A3386 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 3099952..3100422 Burkholderia cenocepacia AU 1054 4091710 YP_622695.1 CDS Bcen_2824 NC_008060.1 3100493 3101650 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bur:Bcep18194_A3385 cation efflux protein; cation diffusion facilitator family transporter complement(3100493..3101650) Burkholderia cenocepacia AU 1054 4091711 YP_622696.1 CDS Bcen_2825 NC_008060.1 3101894 3102187 R PFAM: histone-like nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_A3384 histone-like nucleoid-structuring protein H-NS; histone-like nucleoid-structuring protein H-NS complement(3101894..3102187) Burkholderia cenocepacia AU 1054 4091712 YP_622697.1 CDS Bcen_2826 NC_008060.1 3102545 3103204 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: bur:Bcep18194_A3383 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(3102545..3103204) Burkholderia cenocepacia AU 1054 4091713 YP_622698.1 CDS Bcen_2828 NC_008060.1 3104269 3104607 D KEGG: bur:Bcep18194_A3382 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 3104269..3104607 Burkholderia cenocepacia AU 1054 4091715 YP_622699.1 CDS Bcen_2829 NC_008060.1 3104707 3105882 R PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_A3381 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor complement(3104707..3105882) Burkholderia cenocepacia AU 1054 4091716 YP_622700.1 CDS Bcen_2830 NC_008060.1 3106286 3107368 R PFAM: 2-nitropropane dioxygenase, NPD; KEGG: bur:Bcep18194_A3380 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase, NPD complement(3106286..3107368) Burkholderia cenocepacia AU 1054 4091717 YP_622701.1 CDS Bcen_2831 NC_008060.1 3107591 3108283 D PFAM: dienelactone hydrolase; KEGG: bur:Bcep18194_A3379 carboxymethylenebutenolidase; carboxymethylenebutenolidase 3107591..3108283 Burkholderia cenocepacia AU 1054 4091718 YP_622702.1 CDS Bcen_2832 NC_008060.1 3108365 3109843 D PFAM: Amidase; KEGG: bur:Bcep18194_A3378 amidase; amidase 3108365..3109843 Burkholderia cenocepacia AU 1054 4091719 YP_622703.1 CDS Bcen_2833 NC_008060.1 3109949 3110779 R KEGG: bur:Bcep18194_A3377 5,10-methylenetetrahydrofolate reductase TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase complement(3109949..3110779) Burkholderia cenocepacia AU 1054 4091720 YP_622704.1 CDS Bcen_2834 NC_008060.1 3110814 3111167 R PFAM: membrane protein of unknown function; KEGG: bur:Bcep18194_A3376 membrane protein; hypothetical protein complement(3110814..3111167) Burkholderia cenocepacia AU 1054 4090949 YP_622705.1 CDS Bcen_2835 NC_008060.1 3111267 3112685 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(3111267..3112685) Burkholderia cenocepacia AU 1054 4090950 YP_622706.1 CDS fliA NC_008060.1 3112951 3113682 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor complement(3112951..3113682) Burkholderia cenocepacia AU 1054 4090951 YP_622707.1 CDS Bcen_2837 NC_008060.1 3113708 3114526 R KEGG: bur:Bcep18194_A3373 flagellar biosynthesis protein, FlhG; flagellar biosynthesis protein, FlhG complement(3113708..3114526) Burkholderia cenocepacia AU 1054 4090952 YP_622708.1 CDS flhF NC_008060.1 3114519 3116297 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(3114519..3116297) Burkholderia cenocepacia AU 1054 4090953 YP_622709.1 CDS flhA NC_008060.1 3116294 3118396 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(3116294..3118396) Burkholderia cenocepacia AU 1054 4090954 YP_622710.1 CDS flhB NC_008060.1 3118393 3119592 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB complement(3118393..3119592) Burkholderia cenocepacia AU 1054 4090955 YP_622711.1 CDS Bcen_2841 NC_008060.1 3119989 3120486 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bur:Bcep18194_A3368 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(3119989..3120486) Burkholderia cenocepacia AU 1054 4090956 YP_622712.1 CDS Bcen_2842 NC_008060.1 3120649 3121899 R KEGG: bur:Bcep18194_A3367 hypothetical protein; hypothetical protein complement(3120649..3121899) Burkholderia cenocepacia AU 1054 4090957 YP_622713.1 CDS Bcen_2843 NC_008060.1 3121916 3122419 R KEGG: bur:Bcep18194_A3366 hypothetical protein; hypothetical protein complement(3121916..3122419) Burkholderia cenocepacia AU 1054 4090958 YP_622714.1 CDS Bcen_2844 NC_008060.1 3122693 3123424 R cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ complement(3122693..3123424) Burkholderia cenocepacia AU 1054 4090959 YP_622715.1 CDS Bcen_2845 NC_008060.1 3123427 3123822 R PFAM: response regulator receiver; KEGG: bur:Bcep18194_A3364 response regulator receiver domain protein (CheY-like); response regulator receiver protein complement(3123427..3123822) Burkholderia cenocepacia AU 1054 4090960 YP_622716.1 CDS Bcen_2846 NC_008060.1 3123890 3124972 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(3123890..3124972) Burkholderia cenocepacia AU 1054 4090961 YP_622717.2 CDS Bcen_2847 NC_008060.1 3124978 3125721 R catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(3124978..3125721) Burkholderia cenocepacia AU 1054 4090962 YP_622718.1 CDS Bcen_2848 NC_008060.1 3125718 3126710 R PFAM: MCP methyltransferase, CheR-type; KEGG: bur:Bcep18194_A3361 MCP methyltransferase, CheR-type; chemotaxis protein CheR complement(3125718..3126710) Burkholderia cenocepacia AU 1054 4090963 YP_622719.1 CDS Bcen_2849 NC_008060.1 3126714 3128693 R PFAM: histidine kinase, HAMP region; chemotaxis sensory transducer; KEGG: bur:Bcep18194_A3360 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3126714..3128693) Burkholderia cenocepacia AU 1054 4090964 YP_622720.1 CDS Bcen_2850 NC_008060.1 3128731 3129264 R PFAM: CheW-like protein; KEGG: bur:Bcep18194_A3359 chemotaxis protein CheW; chemotaxis protein CheW complement(3128731..3129264) Burkholderia cenocepacia AU 1054 4090965 YP_622721.1 CDS Bcen_2851 NC_008060.1 3129295 3131565 R PFAM: CheW-like protein; ATP-binding region, ATPase-like; Signal transducing histidine kinase, homodimeric; Hpt; KEGG: bur:Bcep18194_A3358 chemotaxis protein CheA; chemotaxis protein CheA complement(3129295..3131565) Burkholderia cenocepacia AU 1054 4090966 YP_622722.1 CDS Bcen_2852 NC_008060.1 3131599 3131976 R PFAM: response regulator receiver; KEGG: bur:Bcep18194_A3357 response regulator receiver domain protein (CheY-like); response regulator receiver protein complement(3131599..3131976) Burkholderia cenocepacia AU 1054 4090967 YP_622723.1 CDS motB NC_008060.1 3131993 3133012 R with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB complement(3131993..3133012) Burkholderia cenocepacia AU 1054 4090968 YP_622724.1 CDS Bcen_2854 NC_008060.1 3133026 3133886 R With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA complement(3133026..3133886) Burkholderia cenocepacia AU 1054 4090969 YP_622725.1 CDS Bcen_2855 NC_008060.1 3134079 3134633 R With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC complement(3134079..3134633) Burkholderia cenocepacia AU 1054 4090970 YP_622726.1 CDS Bcen_2856 NC_008060.1 3134726 3135046 R with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD complement(3134726..3135046) Burkholderia cenocepacia AU 1054 4090971 YP_622727.1 CDS Bcen_2857 NC_008060.1 3135708 3136772 D PFAM: glycosyl transferase, group 1; KEGG: bur:Bcep18194_A3352 glycosyl transferase, group 1; group 1 glycosyl transferase 3135708..3136772 Burkholderia cenocepacia AU 1054 4090972 YP_622728.1 CDS Bcen_2858 NC_008060.1 3136884 3137180 R PFAM: histone-like nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_A3351 histone-like nucleoid-structuring protein H-NS; histone-like nucleoid-structuring protein H-NS complement(3136884..3137180) Burkholderia cenocepacia AU 1054 4090973 YP_622729.1 CDS Bcen_2859 NC_008060.1 3137480 3138223 D porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 3137480..3138223 Burkholderia cenocepacia AU 1054 4090974 YP_622730.1 CDS Bcen_2860 NC_008060.1 3138355 3139179 R TIGRFAM: Cof protein; HAD-superfamily hydrolase subfamily IIB; PFAM: Haloacid dehalogenase-like hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase-like hydrolase, type 3; KEGG: bur:Bcep18194_A3349 Cof protein/HAD-superfamily hydrolase subfamily IIB; Cof protein complement(3138355..3139179) Burkholderia cenocepacia AU 1054 4090975 YP_622731.1 CDS Bcen_2861 NC_008060.1 3139324 3140205 R PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: bur:Bcep18194_A3348 BadF/BadG/BcrA/BcrD type ATPase; BadF/BadG/BcrA/BcrD type ATPase complement(3139324..3140205) Burkholderia cenocepacia AU 1054 4090976 YP_622732.1 CDS Bcen_2862 NC_008060.1 3140348 3140950 D PFAM: methyladenine glycosylase; KEGG: bur:Bcep18194_A3347 DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I 3140348..3140950 Burkholderia cenocepacia AU 1054 4090977 YP_622733.1 CDS Bcen_2864 NC_008060.1 3142806 3144929 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bur:Bcep18194_A3345 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3142806..3144929 Burkholderia cenocepacia AU 1054 4090979 YP_622734.1 CDS rpsU NC_008060.1 3145092 3145304 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(3145092..3145304) Burkholderia cenocepacia AU 1054 4090980 YP_622735.2 CDS Bcen_2866 NC_008060.1 3145835 3146989 D structural flagella protein; Vibrio contains multiple flagellin genes usually localized into two region on the chromosome, flaAC and flaCEDB in V. cholerae, flaFBA and flaCDE in V. parahemolyticus; FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus; flagellin 3145835..3146989 Burkholderia cenocepacia AU 1054 4090981 YP_622736.1 CDS Bcen_2867 NC_008060.1 3147122 3148630 D PFAM: flagellar hook-associated protein 2-like; flagellar hook-associated 2-like; flagellin hook IN; KEGG: bur:Bcep18194_C7620 flagellar hook-associated protein 2; flagellar hook-associated 2-like protein 3147122..3148630 Burkholderia cenocepacia AU 1054 4090982 YP_622737.1 CDS Bcen_2868 NC_008060.1 3148656 3148955 D KEGG: bpm:BURPS1710b_0093 hypothetical protein; hypothetical protein 3148656..3148955 Burkholderia cenocepacia AU 1054 4090983 YP_622738.1 CDS Bcen_2869 NC_008060.1 3149216 3151558 D PFAM: TPR repeat; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: bte:BTH_I3210 TPR domain protein; hypothetical protein 3149216..3151558 Burkholderia cenocepacia AU 1054 4090984 YP_622739.1 CDS Bcen_2870 NC_008060.1 3151583 3152731 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bpm:BURPS1710b_0095 aminotransferase, DegT/DnrJ/EryC1/StrS family; DegT/DnrJ/EryC1/StrS aminotransferase 3151583..3152731 Burkholderia cenocepacia AU 1054 4090985 YP_622740.1 CDS Bcen_2871 NC_008060.1 3152728 3153192 D PFAM: GCN5-related N-acetyltransferase; KEGG: tfu:Tfu_2603 ribosomal-protein-alanine acetyltransferase; GCN5-related N-acetyltransferase 3152728..3153192 Burkholderia cenocepacia AU 1054 4090986 YP_622741.1 CDS Bcen_2872 NC_008060.1 3153224 3154117 D KEGG: bpm:BURPS1710b_0103 hypothetical protein; hypothetical protein 3153224..3154117 Burkholderia cenocepacia AU 1054 4090987 YP_622742.1 CDS Bcen_2873 NC_008060.1 3154612 3155025 D KEGG: bte:BTH_I3199 hypothetical protein; hypothetical protein 3154612..3155025 Burkholderia cenocepacia AU 1054 4091297 YP_622743.1 CDS Bcen_2874 NC_008060.1 3155133 3155885 R KEGG: eca:ECA1734 hypothetical protein; hypothetical protein complement(3155133..3155885) Burkholderia cenocepacia AU 1054 4091298 YP_622744.1 CDS Bcen_2875 NC_008060.1 3155952 3157901 R PFAM: TPR repeat; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: gsu:GSU1547 TPR domain protein; hypothetical protein complement(3155952..3157901) Burkholderia cenocepacia AU 1054 4091299 YP_622745.1 CDS Bcen_2876 NC_008060.1 3158110 3159714 R KEGG: bur:Bcep18194_A3332 hypothetical protein; hypothetical protein complement(3158110..3159714) Burkholderia cenocepacia AU 1054 4091300 YP_622746.1 CDS Bcen_2877 NC_008060.1 3160220 3160606 D hypothetical protein 3160220..3160606 Burkholderia cenocepacia AU 1054 4091301 YP_622747.1 CDS Bcen_2878 NC_008060.1 3160897 3161712 R PFAM: protein of unknown function DUF955; KEGG: rsp:RSP_4244 hypothetical protein; hypothetical protein complement(3160897..3161712) Burkholderia cenocepacia AU 1054 4091302 YP_622748.1 CDS Bcen_2879 NC_008060.1 3161709 3162113 R hypothetical protein complement(3161709..3162113) Burkholderia cenocepacia AU 1054 4091303 YP_622749.1 CDS Bcen_2880 NC_008060.1 3162118 3162699 R KEGG: rsp:RSP_4245 hypothetical protein; hypothetical protein complement(3162118..3162699) Burkholderia cenocepacia AU 1054 4091304 YP_622750.1 CDS Bcen_2881 NC_008060.1 3162858 3163802 D KEGG: bld:BLi04313 hypothetical protein; hypothetical protein 3162858..3163802 Burkholderia cenocepacia AU 1054 4091305 YP_622751.1 CDS Bcen_2882 NC_008060.1 3163932 3164222 D hypothetical protein 3163932..3164222 Burkholderia cenocepacia AU 1054 4091306 YP_622752.1 CDS Bcen_2883 NC_008060.1 3164463 3168257 D KEGG: mag:amb3766 hypothetical 1337 kDa protein Y4CA; hypothetical protein 3164463..3168257 Burkholderia cenocepacia AU 1054 4091307 YP_622753.1 CDS Bcen_2884 NC_008060.1 3168493 3169602 D KEGG: plu:plu1836 hypothetical protein; hypothetical protein 3168493..3169602 Burkholderia cenocepacia AU 1054 4091308 YP_622754.1 CDS Bcen_2885 NC_008060.1 3169656 3171359 D KEGG: plu:plu1837 hypothetical protein; hypothetical protein 3169656..3171359 Burkholderia cenocepacia AU 1054 4091309 YP_622755.1 CDS Bcen_2886 NC_008060.1 3171658 3173883 R hypothetical protein complement(3171658..3173883) Burkholderia cenocepacia AU 1054 4091310 YP_622756.1 CDS Bcen_2887 NC_008060.1 3173885 3178090 R PFAM: helicase-like; KEGG: ava:Ava_C0226 helicase-like; helicase-like protein complement(3173885..3178090) Burkholderia cenocepacia AU 1054 4091311 YP_622757.1 CDS Bcen_2888 NC_008060.1 3178087 3180561 R hypothetical protein complement(3178087..3180561) Burkholderia cenocepacia AU 1054 4091312 YP_622758.1 CDS Bcen_2889 NC_008060.1 3180922 3182658 R PFAM: N-6 DNA methylase; KEGG: xoo:XOO3951 methyltransferase homolog M.XphI; N-6 DNA methylase complement(3180922..3182658) Burkholderia cenocepacia AU 1054 4091313 YP_622759.1 CDS Bcen_2890 NC_008060.1 3183316 3183666 R KEGG: reu:Reut_C5920 hypothetical protein; hypothetical protein complement(3183316..3183666) Burkholderia cenocepacia AU 1054 4091314 YP_622760.1 CDS Bcen_2891 NC_008060.1 3183993 3184532 R hypothetical protein complement(3183993..3184532) Burkholderia cenocepacia AU 1054 4091315 YP_622761.1 CDS Bcen_2892 NC_008060.1 3184651 3185205 D hypothetical protein 3184651..3185205 Burkholderia cenocepacia AU 1054 4091316 YP_622762.1 CDS Bcen_2893 NC_008060.1 3185214 3185801 D KEGG: bps:BPSL0551 hypothetical protein; hypothetical protein 3185214..3185801 Burkholderia cenocepacia AU 1054 4091317 YP_622763.1 CDS Bcen_2894 NC_008060.1 3186503 3187327 D hypothetical protein 3186503..3187327 Burkholderia cenocepacia AU 1054 4091318 YP_622764.1 CDS Bcen_2895 NC_008060.1 3187324 3190254 D PFAM: Integrase, catalytic region; KEGG: ava:Ava_C0193 integrase, catalytic region; integrase catalytic subunit 3187324..3190254 Burkholderia cenocepacia AU 1054 4091319 YP_622765.1 CDS Bcen_2896 NC_008060.1 3190255 3191325 D KEGG: ava:Ava_C0192 ATPase; hypothetical protein 3190255..3191325 Burkholderia cenocepacia AU 1054 4091320 YP_622766.1 CDS Bcen_2897 NC_008060.1 3191391 3192773 D KEGG: bce:BC5113 zinc finger protein; hypothetical protein 3191391..3192773 Burkholderia cenocepacia AU 1054 4091321 YP_622767.1 CDS Bcen_2898 NC_008060.1 3193045 3193317 D KEGG: xcb:XC_2778 phage-related integrase; phage-related integrase 3193045..3193317 Burkholderia cenocepacia AU 1054 4091322 YP_622768.1 CDS Bcen_2899 NC_008060.1 3193401 3194906 D PFAM: Integrase, catalytic region; KEGG: psp:PSPPH_1140 ISPsy20, transposase IstA; integrase catalytic subunit 3193401..3194906 Burkholderia cenocepacia AU 1054 4091323 YP_622769.1 CDS Bcen_2900 NC_008060.1 3194899 3195696 D PFAM: IstB-like ATP-binding protein; SMART: ATPase; KEGG: psp:PSPPH_1141 ISPsy20, transposase IstB; IstB-like ATP-binding protein 3194899..3195696 Burkholderia cenocepacia AU 1054 4091324 YP_622770.1 CDS Bcen_2901 NC_008060.1 3195793 3196107 D TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: eba:ebA7193 methylated DNA-protein cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 3195793..3196107 Burkholderia cenocepacia AU 1054 4091325 YP_622771.1 CDS Bcen_2902 NC_008060.1 3196213 3196659 R TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll6975 hypothetical protein; alkylhydroperoxidase AhpD core complement(3196213..3196659) Burkholderia cenocepacia AU 1054 4091326 YP_622772.1 CDS Bcen_2903 NC_008060.1 3196811 3198304 D PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: reu:Reut_C6135 regulatory protein GntR, HTH:aminotransferase, class I and II; GntR family transcriptional regulator 3196811..3198304 Burkholderia cenocepacia AU 1054 4091327 YP_622773.1 CDS Bcen_2904 NC_008060.1 3198942 3199829 D PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_A3330 cytochrome c, class I; cytochrome c, class I 3198942..3199829 Burkholderia cenocepacia AU 1054 4091329 YP_622774.1 CDS Bcen_2905 NC_008060.1 3199939 3202026 R PFAM: UvrD/REP helicase; KEGG: bur:Bcep18194_A3329 UvrD/REP helicase; UvrD/REP helicase complement(3199939..3202026) Burkholderia cenocepacia AU 1054 4091330 YP_622775.1 CDS Bcen_2906 NC_008060.1 3202338 3203045 D KEGG: bur:Bcep18194_A3328 hypothetical protein; hypothetical protein 3202338..3203045 Burkholderia cenocepacia AU 1054 4091331 YP_622776.1 CDS Bcen_2907 NC_008060.1 3203444 3204496 D PFAM: oxidoreductase-like; Oxidoreductase-like; KEGG: bur:Bcep18194_A3327 oxidoreductase-like; oxidoreductase-like 3203444..3204496 Burkholderia cenocepacia AU 1054 4091332 YP_622777.1 CDS Bcen_2908 NC_008060.1 3204718 3205083 D KEGG: bur:Bcep18194_A3326 hypothetical protein; hypothetical protein 3204718..3205083 Burkholderia cenocepacia AU 1054 4091333 YP_622778.2 CDS gcvT NC_008060.1 3205554 3206672 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3205554..3206672 Burkholderia cenocepacia AU 1054 4093580 YP_622779.1 CDS Bcen_2910 NC_008060.1 3206799 3207179 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 3206799..3207179 Burkholderia cenocepacia AU 1054 4093581 YP_622780.1 CDS Bcen_2911 NC_008060.1 3207241 3210168 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3207241..3210168 Burkholderia cenocepacia AU 1054 4093582 YP_622781.1 CDS Bcen_2912 NC_008060.1 3210323 3211465 D KEGG: bur:Bcep18194_A3322 hypothetical protein; hypothetical protein 3210323..3211465 Burkholderia cenocepacia AU 1054 4093583 YP_622782.1 CDS Bcen_2913 NC_008060.1 3211496 3212884 D KEGG: bur:Bcep18194_A3321 iron-sulfur-dependent L-serine dehydratase single chain form TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 3211496..3212884 Burkholderia cenocepacia AU 1054 4093584 YP_622783.1 CDS Bcen_2914 NC_008060.1 3212944 3213180 R KEGG: bur:Bcep18194_A3319 SpoVT/AbrB-like protein; SpoVT/AbrB-like protein complement(3212944..3213180) Burkholderia cenocepacia AU 1054 4093585 YP_622784.1 CDS Bcen_2915 NC_008060.1 3213364 3213648 R TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: plasmid stabilization system; KEGG: neu:NE0552 hypothetical protein; addiction module toxin RelE/StbE complement(3213364..3213648) Burkholderia cenocepacia AU 1054 4093586 YP_622785.1 CDS Bcen_2916 NC_008060.1 3213645 3214106 R KEGG: plu:plu2211 hypothetical protein; hypothetical protein complement(3213645..3214106) Burkholderia cenocepacia AU 1054 4093587 YP_622786.1 CDS Bcen_2917 NC_008060.1 3214385 3216088 D catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; thiamine pyrophosphate protein 3214385..3216088 Burkholderia cenocepacia AU 1054 4093588 YP_622787.1 CDS Bcen_2918 NC_008060.1 3216085 3217176 D KEGG: bur:Bcep18194_A3317 hypothetical protein; hypothetical protein 3216085..3217176 Burkholderia cenocepacia AU 1054 4093589 YP_622788.1 CDS Bcen_2919 NC_008060.1 3217403 3218458 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_A3316 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(3217403..3218458) Burkholderia cenocepacia AU 1054 4093590 YP_622789.1 CDS Bcen_2920 NC_008060.1 3218636 3219208 R KEGG: bur:Bcep18194_A3315 hypothetical protein; hypothetical protein complement(3218636..3219208) Burkholderia cenocepacia AU 1054 4093591 YP_622790.1 CDS Bcen_2921 NC_008060.1 3219367 3221028 R PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_A3314 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase complement(3219367..3221028) Burkholderia cenocepacia AU 1054 4093592 YP_622791.1 CDS Bcen_2922 NC_008060.1 3221132 3221653 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: bur:Bcep18194_A3313 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3221132..3221653 Burkholderia cenocepacia AU 1054 4093593 YP_622792.1 CDS Bcen_2923 NC_008060.1 3221902 3223527 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A3312 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(3221902..3223527) Burkholderia cenocepacia AU 1054 4093594 YP_622793.1 CDS Bcen_2924 NC_008060.1 3223692 3224576 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3311 transcriptional regulator, LysR family; LysR family transcriptional regulator 3223692..3224576 Burkholderia cenocepacia AU 1054 4093595 YP_622794.1 CDS Bcen_2925 NC_008060.1 3224569 3225366 R catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit complement(3224569..3225366) Burkholderia cenocepacia AU 1054 4093596 YP_622795.1 CDS Bcen_2926 NC_008060.1 3225363 3226760 R PFAM: Ethanolamine ammonia lyase large subunit; KEGG: bur:Bcep18194_A3309 ethanolamine ammonia lyase large subunit; ethanolamine ammonia lyase large subunit complement(3225363..3226760) Burkholderia cenocepacia AU 1054 4093597 YP_622796.1 CDS Bcen_2927 NC_008060.1 3226861 3228273 R TIGRFAM: Ethanolamine permease; PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_A3308 amino acid transporter; ethanolamine permease complement(3226861..3228273) Burkholderia cenocepacia AU 1054 4093598 YP_622797.1 CDS Bcen_2928 NC_008060.1 3228505 3229968 R PFAM: Conserved TM helix; KEGG: bur:Bcep18194_A3307 hypothetical protein; hypothetical protein complement(3228505..3229968) Burkholderia cenocepacia AU 1054 4093599 YP_622798.1 CDS Bcen_2929 NC_008060.1 3230244 3231125 D PFAM: helix-turn-helix, AraC type; transcription activator, effector binding; KEGG: bur:Bcep18194_A3306 transcriptional regulator, AraC family; AraC family transcriptional regulator 3230244..3231125 Burkholderia cenocepacia AU 1054 4093600 YP_622799.1 CDS Bcen_2930 NC_008060.1 3231284 3231667 R KEGG: bur:Bcep18194_A3305 hypothetical protein; hypothetical protein complement(3231284..3231667) Burkholderia cenocepacia AU 1054 4093601 YP_622800.1 CDS Bcen_2931 NC_008060.1 3231678 3234218 R TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; Heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase-like hydrolase; E1-E2 ATPase-associated region; KEGG: bur:Bcep18194_A3304 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase complement(3231678..3234218) Burkholderia cenocepacia AU 1054 4093602 YP_622801.1 CDS Bcen_2932 NC_008060.1 3234300 3234731 D TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_A3303 transcriptional regulator, MerR family; MerR family transcriptional regulator 3234300..3234731 Burkholderia cenocepacia AU 1054 4093603 YP_622802.1 CDS Bcen_2933 NC_008060.1 3234800 3235372 D PFAM: transcriptional regulator PadR-like; KEGG: bur:Bcep18194_A3302 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 3234800..3235372 Burkholderia cenocepacia AU 1054 4093604 YP_622803.1 CDS Bcen_2934 NC_008060.1 3235418 3236848 R PFAM: FAD linked oxidase-like; KEGG: bur:Bcep18194_A3301 FAD linked oxidase-like; FAD linked oxidase-like protein complement(3235418..3236848) Burkholderia cenocepacia AU 1054 4093605 YP_622804.1 CDS Bcen_2935 NC_008060.1 3236864 3237652 R PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_A3300 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(3236864..3237652) Burkholderia cenocepacia AU 1054 4093606 YP_622805.1 CDS Bcen_2936 NC_008060.1 3237710 3238864 R catalyzes the transfer of an amino moiety; aminotransferase complement(3237710..3238864) Burkholderia cenocepacia AU 1054 4093607 YP_622806.1 CDS Bcen_2937 NC_008060.1 3239071 3239739 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_A3298 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3239071..3239739) Burkholderia cenocepacia AU 1054 4093608 YP_622807.1 CDS Bcen_2938 NC_008060.1 3239871 3241523 D PFAM: acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_A3297 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 3239871..3241523 Burkholderia cenocepacia AU 1054 4093609 YP_622808.1 CDS Bcen_2939 NC_008060.1 3241574 3243082 D PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_A3296 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3241574..3243082 Burkholderia cenocepacia AU 1054 4093610 YP_622809.1 CDS Bcen_2940 NC_008060.1 3243302 3243712 D KEGG: reu:Reut_A2935 hypothetical protein; hypothetical protein 3243302..3243712 Burkholderia cenocepacia AU 1054 4093611 YP_622810.1 CDS Bcen_2941 NC_008060.1 3243919 3245058 R PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_A3295 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor complement(3243919..3245058) Burkholderia cenocepacia AU 1054 4093612 YP_622811.2 CDS putA NC_008060.1 3245143 3249075 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(3245143..3249075) Burkholderia cenocepacia AU 1054 4093613 YP_622812.1 CDS Bcen_2943 NC_008060.1 3249502 3251763 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(3249502..3251763) Burkholderia cenocepacia AU 1054 4093614 YP_622813.1 CDS hemE NC_008060.1 3252215 3253393 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(3252215..3253393) Burkholderia cenocepacia AU 1054 4093615 YP_622814.1 CDS Bcen_2945 NC_008060.1 3253459 3254271 D PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_A3291 prephenate dehydratase; prephenate dehydratase 3253459..3254271 Burkholderia cenocepacia AU 1054 4093182 YP_622815.1 CDS Bcen_2946 NC_008060.1 3254672 3254938 R KEGG: bpm:BURPS1710b_0174 hypothetical protein; hypothetical protein complement(3254672..3254938) Burkholderia cenocepacia AU 1054 4093183 YP_622816.1 CDS Bcen_2947 NC_008060.1 3254961 3256688 R activates fatty acids by binding to coenzyme A; AMP-binding protein complement(3254961..3256688) Burkholderia cenocepacia AU 1054 4093184 YP_622817.1 CDS atpC NC_008060.1 3256952 3257377 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(3256952..3257377) Burkholderia cenocepacia AU 1054 4093185 YP_622818.1 CDS Bcen_2949 NC_008060.1 3257498 3258892 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(3257498..3258892) Burkholderia cenocepacia AU 1054 4093186 YP_622819.1 CDS Bcen_2950 NC_008060.1 3258959 3259834 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(3258959..3259834) Burkholderia cenocepacia AU 1054 4093187 YP_622820.1 CDS Bcen_2951 NC_008060.1 3259904 3261445 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(3259904..3261445) Burkholderia cenocepacia AU 1054 4093188 YP_622821.1 CDS Bcen_2952 NC_008060.1 3261490 3262029 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(3261490..3262029) Burkholderia cenocepacia AU 1054 4093189 YP_622822.1 CDS Bcen_2953 NC_008060.1 3262032 3262502 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(3262032..3262502) Burkholderia cenocepacia AU 1054 4093190 YP_622823.1 CDS Bcen_2954 NC_008060.1 3262632 3262901 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(3262632..3262901) Burkholderia cenocepacia AU 1054 4093191 YP_622824.1 CDS Bcen_2955 NC_008060.1 3262977 3263828 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(3262977..3263828) Burkholderia cenocepacia AU 1054 4093192 YP_622825.1 CDS Bcen_2956 NC_008060.1 3263939 3264463 R KEGG: bur:Bcep18194_A3281 F0F1-type ATP synthase subunit I-like; F0F1-type ATP synthase subunit I-like complement(3263939..3264463) Burkholderia cenocepacia AU 1054 4093193 YP_622826.1 CDS Bcen_2957 NC_008060.1 3264578 3264895 R KEGG: bur:Bcep18194_A3280 hypothetical protein; hypothetical protein complement(3264578..3264895) Burkholderia cenocepacia AU 1054 4093194 YP_622827.1 CDS Bcen_2958 NC_008060.1 3265030 3266160 R PFAM: Citrate transporter; KEGG: bur:Bcep18194_A3279 Na+/H+ antiporter, NhaD family; citrate transporter complement(3265030..3266160) Burkholderia cenocepacia AU 1054 4093195 YP_622828.1 CDS Bcen_2959 NC_008060.1 3266171 3267064 R TIGRFAM: parB-like partition proteins; PFAM: ParB-like nuclease; KEGG: bur:Bcep18194_A3278 ParB-like partition protein; parB-like partition proteins complement(3266171..3267064) Burkholderia cenocepacia AU 1054 4093196 YP_622829.1 CDS Bcen_2960 NC_008060.1 3267096 3267875 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bur:Bcep18194_A3277 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(3267096..3267875) Burkholderia cenocepacia AU 1054 4093197 YP_622830.1 CDS gidB NC_008060.1 3267927 3268613 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(3267927..3268613) Burkholderia cenocepacia AU 1054 4093198 YP_622831.1 CDS Bcen_2962 NC_008060.1 3268610 3270580 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3268610..3270580) Burkholderia cenocepacia AU 1054 4093199 YP_622832.1 CDS Bcen_2963 NC_008060.1 3271114 3271869 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A3274 ABC branched-chain amino acid family transporter, ATPase subunit; ABC transporter complement(3271114..3271869) Burkholderia cenocepacia AU 1054 4093200 YP_622833.1 CDS Bcen_2964 NC_008060.1 3271869 3273653 R PFAM: inner-membrane translocator; ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A3273 ABC branched-chain amino acid family transporter, fused ATPase and inner membrane subunit; ABC transporter related complement(3271869..3273653) Burkholderia cenocepacia AU 1054 4093201 YP_622834.1 CDS Bcen_2965 NC_008060.1 3273658 3274842 R PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A3272 ABC branched-chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(3273658..3274842) Burkholderia cenocepacia AU 1054 4093202 YP_622835.1 CDS Bcen_2966 NC_008060.1 3274912 3276069 R PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_A3271 ABC branched-chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor complement(3274912..3276069) Burkholderia cenocepacia AU 1054 4093203 YP_622836.1 CDS Bcen_2967 NC_008060.1 3276070 3276717 R hypothetical protein complement(3276070..3276717) Burkholderia cenocepacia AU 1054 4093204 YP_622837.1 CDS Bcen_2968 NC_008060.1 3277134 3278111 R PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A3269 ABC branched-chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(3277134..3278111) Burkholderia cenocepacia AU 1054 4093205 YP_622838.1 CDS Bcen_2969 NC_008060.1 3278111 3279073 R PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_A3268 ABC branched-chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(3278111..3279073) Burkholderia cenocepacia AU 1054 4093206 YP_622839.1 CDS Bcen_2970 NC_008060.1 3279124 3280323 R KEGG: bur:Bcep18194_A3267 ABC branched-chain amino acid family transporter, periplasmic ligand binding protein; branched chain amino acid ABC transporter periplasmic ligand-binding protein complement(3279124..3280323) Burkholderia cenocepacia AU 1054 4093207 YP_622840.1 CDS Bcen_2971 NC_008060.1 3280401 3281156 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A3266 ABC branched-chain amino acid family transporter, ATPase subunit; ABC transporter complement(3280401..3281156) Burkholderia cenocepacia AU 1054 4093208 YP_622841.1 CDS Bcen_2972 NC_008060.1 3281153 3281932 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A3265 ABC branched-chain amino acid family transporter, ATPase subunit; ABC transporter complement(3281153..3281932) Burkholderia cenocepacia AU 1054 4093209 YP_622842.1 CDS Bcen_2973 NC_008060.1 3282366 3284102 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_A3263 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(3282366..3284102) Burkholderia cenocepacia AU 1054 4093210 YP_622843.1 CDS Bcen_2974 NC_008060.1 3284293 3285231 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A3262 transcriptional regulator, LysR family; LysR family transcriptional regulator 3284293..3285231 Burkholderia cenocepacia AU 1054 4093211 YP_622844.1 CDS Bcen_2975 NC_008060.1 3285440 3285973 D PFAM: adenylate cyclase; KEGG: bur:Bcep18194_A3261 adenylate cyclase; adenylate cyclase 3285440..3285973 Burkholderia cenocepacia AU 1054 4093212 YP_622845.1 CDS Bcen_2976 NC_008060.1 3286040 3286525 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_A3260 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(3286040..3286525) Burkholderia cenocepacia AU 1054 4093213 YP_622846.1 CDS phhA NC_008060.1 3286595 3287557 D phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 3286595..3287557 Burkholderia cenocepacia AU 1054 4093214 YP_622847.1 CDS phhB NC_008060.1 3287620 3287997 D 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 3287620..3287997 Burkholderia cenocepacia AU 1054 4093215 YP_622848.1 CDS Bcen_2979 NC_008060.1 3288097 3288357 R KEGG: bur:Bcep18194_A3257 hypothetical protein; hypothetical protein complement(3288097..3288357) Burkholderia cenocepacia AU 1054 4093216 YP_622849.1 CDS Bcen_2980 NC_008060.1 3288450 3289142 D PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A3256 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3288450..3289142 Burkholderia cenocepacia AU 1054 4093217 YP_622850.1 CDS Bcen_2981 NC_008060.1 3289264 3290748 D PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; Two-component sensor kinase-like; KEGG: bur:Bcep18194_A3255 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 3289264..3290748 Burkholderia cenocepacia AU 1054 4093218 YP_622851.1 CDS Bcen_2982 NC_008060.1 3290910 3291440 R PFAM: nuclear protein SET; KEGG: bur:Bcep18194_A3254 SET domain protein; nuclear protein SET complement(3290910..3291440) Burkholderia cenocepacia AU 1054 4093219 YP_622852.1 CDS Bcen_2983 NC_008060.1 3291618 3292730 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_A3253 NADH-flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(3291618..3292730) Burkholderia cenocepacia AU 1054 4093220 YP_622853.1 CDS Bcen_2984 NC_008060.1 3292959 3293669 R Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase complement(3292959..3293669) Burkholderia cenocepacia AU 1054 4093144 YP_622854.1 CDS Bcen_2985 NC_008060.1 3293698 3294336 R PFAM: regulatory protein, MarR; regulatory protein, ArsR; KEGG: bur:Bcep18194_A3251 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(3293698..3294336) Burkholderia cenocepacia AU 1054 4093145 YP_622855.1 CDS Bcen_2986 NC_008061.1 19 1329 D KEGG: bur:Bcep18194_B0808 cytochrome c, class I; cytochrome c, class I 19..1329 Burkholderia cenocepacia AU 1054 4095551 YP_622856.1 CDS Bcen_2987 NC_008061.1 1641 2561 R PFAM: regulatory protein, LysR; KEGG: atc:AGR_pAT_467 probable transcription regulator PA2316; LysR family transcriptional regulator complement(1641..2561) Burkholderia cenocepacia AU 1054 4095552 YP_622857.1 CDS Bcen_2988 NC_008061.1 2671 3408 D KEGG: bur:Bcep18194_B2086 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2671..3408 Burkholderia cenocepacia AU 1054 4095553 YP_622858.1 CDS Bcen_2989 NC_008061.1 3465 4547 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: zmo:ZMO1885 NADH:flavin oxidoreductase; NADH:flavin oxidoreductase 3465..4547 Burkholderia cenocepacia AU 1054 4095531 YP_622859.1 CDS Bcen_2990 NC_008061.1 4709 5545 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6920 alpha/beta hydrolase; alpha/beta hydrolase 4709..5545 Burkholderia cenocepacia AU 1054 4095532 YP_622860.1 CDS Bcen_2991 NC_008061.1 5622 6011 D PFAM: protein of unknown function DUF1486; KEGG: nfa:nfa41920 hypothetical protein; limonene-1,2-epoxide hydrolase 5622..6011 Burkholderia cenocepacia AU 1054 4095533 YP_622861.1 CDS Bcen_2992 NC_008061.1 6210 7409 D KEGG: bur:Bcep18194_B0252 peptidase M20D, amidohydrolase TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation; peptidase M20D, amidohydrolase 6210..7409 Burkholderia cenocepacia AU 1054 4095534 YP_622862.1 CDS Bcen_2993 NC_008061.1 7466 8797 D PFAM: General substrate transporter; KEGG: bur:Bcep18194_B0253 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 7466..8797 Burkholderia cenocepacia AU 1054 4095535 YP_622863.1 CDS Bcen_2994 NC_008061.1 8816 9736 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0254 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(8816..9736) Burkholderia cenocepacia AU 1054 4095536 YP_622864.1 CDS Bcen_2995 NC_008061.1 9873 10646 D PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_B0255 extracellular solute-binding protein, family 3; extracellular solute-binding protein 9873..10646 Burkholderia cenocepacia AU 1054 4095537 YP_622865.1 CDS Bcen_2996 NC_008061.1 10702 11817 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bur:Bcep18194_B0256 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 10702..11817 Burkholderia cenocepacia AU 1054 4095538 YP_622866.1 CDS Bcen_2997 NC_008061.1 12028 12855 R TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_B0262 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(12028..12855) Burkholderia cenocepacia AU 1054 4095539 YP_622867.1 CDS Bcen_2998 NC_008061.1 13044 14246 D catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 13044..14246 Burkholderia cenocepacia AU 1054 4095540 YP_622868.1 CDS Bcen_2999 NC_008061.1 14347 14943 R PFAM: protein of unknown function DUF523; KEGG: bur:Bcep18194_B0264 protein of unknown function DUF523; hypothetical protein complement(14347..14943) Burkholderia cenocepacia AU 1054 4095541 YP_622869.1 CDS Bcen_3000 NC_008061.1 14959 15519 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0265 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(14959..15519) Burkholderia cenocepacia AU 1054 4095542 YP_622870.1 CDS Bcen_3001 NC_008061.1 15516 16373 R PFAM: Methyltransferase type 11; KEGG: bur:Bcep18194_B0266 hypothetical protein; methyltransferase type 11 complement(15516..16373) Burkholderia cenocepacia AU 1054 4095543 YP_622871.1 CDS Bcen_3002 NC_008061.1 16685 18229 D TIGRFAM: PAS; PFAM: histidine kinase, HAMP region; KEGG: bur:Bcep18194_B0267 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 16685..18229 Burkholderia cenocepacia AU 1054 4095544 YP_622872.1 CDS Bcen_3003 NC_008061.1 18578 20185 D TIGRFAM: PAS; PFAM: histidine kinase, HAMP region; KEGG: bur:Bcep18194_B0268 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 18578..20185 Burkholderia cenocepacia AU 1054 4095545 YP_622873.1 CDS Bcen_3004 NC_008061.1 20300 21769 R KEGG: bur:Bcep18194_B0279 succinic semialdehyde dehydrogenase TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase complement(20300..21769) Burkholderia cenocepacia AU 1054 4095546 YP_622874.1 CDS Bcen_3005 NC_008061.1 21861 23150 R TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: bur:Bcep18194_B0280 4-aminobutyrate aminotransferase; 4-aminobutyrate aminotransferase complement(21861..23150) Burkholderia cenocepacia AU 1054 4095547 YP_622875.1 CDS Bcen_3006 NC_008061.1 23271 24779 D PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B0281 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator 23271..24779 Burkholderia cenocepacia AU 1054 4095548 YP_622876.1 CDS Bcen_3007 NC_008061.1 25049 25885 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_B0286 protein of unknown function DUF6, transmembrane; hypothetical protein complement(25049..25885) Burkholderia cenocepacia AU 1054 4095549 YP_622877.1 CDS Bcen_3008 NC_008061.1 25989 27062 D catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 25989..27062 Burkholderia cenocepacia AU 1054 4095550 YP_622878.1 CDS Bcen_3009 NC_008061.1 27135 27728 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0288 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 27135..27728 Burkholderia cenocepacia AU 1054 4095261 YP_622879.1 CDS Bcen_3010 NC_008061.1 27957 29036 D PFAM: purine nucleoside permease; KEGG: bur:Bcep18194_B0289 purine nucleoside transporter; purine nucleoside permease 27957..29036 Burkholderia cenocepacia AU 1054 4095262 YP_622880.1 CDS Bcen_3011 NC_008061.1 29264 29557 R KEGG: bur:Bcep18194_B0292 hypothetical protein; hypothetical protein complement(29264..29557) Burkholderia cenocepacia AU 1054 4095263 YP_622881.1 CDS Bcen_3012 NC_008061.1 29966 30970 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0293 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(29966..30970) Burkholderia cenocepacia AU 1054 4095264 YP_622882.1 CDS Bcen_3013 NC_008061.1 31064 32005 D PFAM: Alpha/beta hydrolase fold-3; KEGG: bur:Bcep18194_B0294 esterase/lipase/thioesterase; Alpha/beta hydrolase fold-3 31064..32005 Burkholderia cenocepacia AU 1054 4095265 YP_622883.1 CDS Bcen_3014 NC_008061.1 32044 33261 D PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_B0295 secretion protein, HlyD family; secretion protein HlyD 32044..33261 Burkholderia cenocepacia AU 1054 4095266 YP_622884.1 CDS Bcen_3015 NC_008061.1 33307 36492 D TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_B0296 hydrophobe/amphiphile efflux pump, HAE1; hydrophobe/amphiphile efflux protein 33307..36492 Burkholderia cenocepacia AU 1054 4095267 YP_622885.1 CDS Bcen_3016 NC_008061.1 36503 38044 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B0297 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT 36503..38044 Burkholderia cenocepacia AU 1054 4095268 YP_622886.1 CDS Bcen_3017 NC_008061.1 38431 38844 D hypothetical protein 38431..38844 Burkholderia cenocepacia AU 1054 4095269 YP_622887.1 CDS Bcen_3018 NC_008061.1 39037 39927 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0300 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(39037..39927) Burkholderia cenocepacia AU 1054 4095270 YP_622888.1 CDS Bcen_3019 NC_008061.1 40029 40469 D PFAM: transmembrane pair; KEGG: bur:Bcep18194_B0301 transmembrane protein; transmembrane pair 40029..40469 Burkholderia cenocepacia AU 1054 4095271 YP_622889.1 CDS Bcen_3020 NC_008061.1 40572 41423 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B0304 alpha/beta hydrolase; alpha/beta hydrolase complement(40572..41423) Burkholderia cenocepacia AU 1054 4095272 YP_622890.1 CDS Bcen_3021 NC_008061.1 41753 42889 D hypothetical protein 41753..42889 Burkholderia cenocepacia AU 1054 4095273 YP_622891.1 CDS Bcen_3022 NC_008061.1 42895 43731 D KEGG: bte:BTH_I1932 hypothetical protein; hypothetical protein 42895..43731 Burkholderia cenocepacia AU 1054 4095274 YP_622892.1 CDS Bcen_3023 NC_008061.1 43754 44083 R KEGG: bur:Bcep18194_B0305 hypothetical protein; hypothetical protein complement(43754..44083) Burkholderia cenocepacia AU 1054 4095275 YP_622893.1 CDS Bcen_3024 NC_008061.1 44109 45470 R PFAM: response regulator receiver; SMART: ATPase; KEGG: bur:Bcep18194_B0306 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator complement(44109..45470) Burkholderia cenocepacia AU 1054 4095276 YP_622894.1 CDS Bcen_3025 NC_008061.1 45460 47364 R PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_B0307 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase complement(45460..47364) Burkholderia cenocepacia AU 1054 4095277 YP_622895.1 CDS Bcen_3026 NC_008061.1 47514 48923 R PFAM: Citrate carrier protein; KEGG: bur:Bcep18194_B0308 citrate carrier protein; citrate carrier protein complement(47514..48923) Burkholderia cenocepacia AU 1054 4095278 YP_622896.1 CDS Bcen_3027 NC_008061.1 49314 50087 D PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_B0309 NlpA lipoprotein; NLPA lipoprotein 49314..50087 Burkholderia cenocepacia AU 1054 4095279 YP_622897.1 CDS Bcen_3028 NC_008061.1 50164 51576 D KEGG: bur:Bcep18194_B0310 flavin-dependent oxidoreductase; flavin-dependent oxidoreductase 50164..51576 Burkholderia cenocepacia AU 1054 4096155 YP_622898.1 CDS Bcen_3029 NC_008061.1 51595 52779 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0311 ABC metal ion transporter, ATPase subunit; ABC transporter 51595..52779 Burkholderia cenocepacia AU 1054 4096156 YP_622899.1 CDS Bcen_3030 NC_008061.1 52772 53428 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0312 ABC metal ion transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 52772..53428 Burkholderia cenocepacia AU 1054 4096157 YP_622900.1 CDS Bcen_3031 NC_008061.1 53480 54322 D KEGG: bur:Bcep18194_B0313 hypothetical protein; hypothetical protein 53480..54322 Burkholderia cenocepacia AU 1054 4096158 YP_622901.1 CDS Bcen_3032 NC_008061.1 54319 55530 D PFAM: acyl-CoA dehydrogenase-like; KEGG: bur:Bcep18194_B0314 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase 54319..55530 Burkholderia cenocepacia AU 1054 4096159 YP_622902.1 CDS Bcen_3033 NC_008061.1 55547 56356 R KEGG: bur:Bcep18194_B0315 hypothetical protein; hypothetical protein complement(55547..56356) Burkholderia cenocepacia AU 1054 4096160 YP_622903.1 CDS Bcen_3034 NC_008061.1 56463 57734 D PFAM: cobalamin synthesis protein, P47K; KEGG: bur:Bcep18194_B0316 cobalamin synthesis protein/P47K; cobalamin synthesis protein, P47K 56463..57734 Burkholderia cenocepacia AU 1054 4096161 YP_622904.1 CDS Bcen_3035 NC_008061.1 57763 58713 D similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase 57763..58713 Burkholderia cenocepacia AU 1054 4096162 YP_622905.1 CDS Bcen_3036 NC_008061.1 58707 59285 D KEGG: bur:Bcep18194_B0318 6-pyruvoyl-tetrahydropterin synthase-like; 6-pyruvoyl-tetrahydropterin synthase 58707..59285 Burkholderia cenocepacia AU 1054 4096163 YP_622906.1 CDS Bcen_3037 NC_008061.1 59285 59845 D KEGG: bur:Bcep18194_B0319 carbonic anhydrases/acetyltransferase isoleucine patch superfamily; carbonic anhydrase 59285..59845 Burkholderia cenocepacia AU 1054 4096164 YP_622907.1 CDS Bcen_3038 NC_008061.1 59849 61219 D Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 59849..61219 Burkholderia cenocepacia AU 1054 4096165 YP_622908.1 CDS Bcen_3039 NC_008061.1 61216 61680 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_B0321 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(61216..61680) Burkholderia cenocepacia AU 1054 4096166 YP_622909.1 CDS Bcen_3040 NC_008061.1 61849 62475 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0322 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 61849..62475 Burkholderia cenocepacia AU 1054 4096167 YP_622910.1 CDS Bcen_3041 NC_008061.1 62508 63356 R PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_B0324 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(62508..63356) Burkholderia cenocepacia AU 1054 4096168 YP_622911.1 CDS Bcen_3042 NC_008061.1 63494 64513 D KEGG: bur:Bcep18194_B0325 uncharacterized membrane-anchored protein; membrane-anchored protein 63494..64513 Burkholderia cenocepacia AU 1054 4096169 YP_622912.1 CDS Bcen_3043 NC_008061.1 64510 65235 D PFAM: peptidase M50; KEGG: bur:Bcep18194_B0326 peptidase M50; peptidase M50 64510..65235 Burkholderia cenocepacia AU 1054 4096170 YP_622913.1 CDS Bcen_3044 NC_008061.1 65302 66696 R TIGRFAM: D-galactonate transporter; PFAM: General substrate transporter; KEGG: bur:Bcep18194_B0327 D-galactonate transporter; D-galactonate transporter complement(65302..66696) Burkholderia cenocepacia AU 1054 4096171 YP_622914.1 CDS Bcen_3045 NC_008061.1 66944 68521 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B0328 aldehyde dehydrogenase; aldehyde dehydrogenase 66944..68521 Burkholderia cenocepacia AU 1054 4096172 YP_622915.1 CDS Bcen_3046 NC_008061.1 68649 69020 R PFAM: PilT protein-like; KEGG: bur:Bcep18194_B0329 PilT protein-like; PilT protein-like protein complement(68649..69020) Burkholderia cenocepacia AU 1054 4096173 YP_622916.1 CDS Bcen_3047 NC_008061.1 69017 69214 R KEGG: bur:Bcep18194_B0330 hypothetical protein; hypothetical protein complement(69017..69214) Burkholderia cenocepacia AU 1054 4096174 YP_622917.1 CDS Bcen_3048 NC_008061.1 69400 69954 D KEGG: bur:Bcep18194_B0331 hypothetical protein; hypothetical protein 69400..69954 Burkholderia cenocepacia AU 1054 4096044 YP_622918.1 CDS Bcen_3049 NC_008061.1 70069 70983 R catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase complement(70069..70983) Burkholderia cenocepacia AU 1054 4096045 YP_622919.1 CDS Bcen_3050 NC_008061.1 71213 72766 D PFAM: D-galactarate dehydratase/Altronate hydrolase-like; KEGG: bur:Bcep18194_B0333 galactarate dehydratase; galactarate dehydratase 71213..72766 Burkholderia cenocepacia AU 1054 4096046 YP_622920.1 CDS Bcen_3051 NC_008061.1 72852 73334 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: cps:CPS_4919 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(72852..73334) Burkholderia cenocepacia AU 1054 4096047 YP_622921.1 CDS Bcen_3052 NC_008061.1 73461 74591 D PFAM: Extracellular ligand-binding receptor; KEGG: eba:ebA3175 amino acid ABC transporter; extracellular ligand-binding receptor 73461..74591 Burkholderia cenocepacia AU 1054 4096048 YP_622922.1 CDS Bcen_3053 NC_008061.1 74588 76078 D PFAM: formylmethionine deformylase; KEGG: mlo:mlr1594 branched-chain amino acid transferase; aminotransferase, class IV 74588..76078 Burkholderia cenocepacia AU 1054 4096049 YP_622923.1 CDS Bcen_3054 NC_008061.1 76213 76605 D KEGG: bur:Bcep18194_B0334 hypothetical protein; hypothetical protein 76213..76605 Burkholderia cenocepacia AU 1054 4096050 YP_622924.1 CDS Bcen_3055 NC_008061.1 76618 77139 D PFAM: RbsD or FucU transport; KEGG: bur:Bcep18194_B0335 RbsD or FucU transport associated protein; transport protein RbsD/FucU 76618..77139 Burkholderia cenocepacia AU 1054 4096051 YP_622925.1 CDS Bcen_3056 NC_008061.1 77327 77764 D PFAM: DoxX; KEGG: bur:Bcep18194_B0336 DoxX family membrane protein; DoxX protein 77327..77764 Burkholderia cenocepacia AU 1054 4096052 YP_622926.1 CDS Bcen_3057 NC_008061.1 77868 79244 R PFAM: General substrate transporter; KEGG: bur:Bcep18194_B0337 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(77868..79244) Burkholderia cenocepacia AU 1054 4096053 YP_622927.1 CDS Bcen_3058 NC_008061.1 79500 80678 R PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B0339 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor complement(79500..80678) Burkholderia cenocepacia AU 1054 4096054 YP_622928.1 CDS Bcen_3059 NC_008061.1 80862 81113 R KEGG: bur:Bcep18194_B0340 hypothetical protein; hypothetical protein complement(80862..81113) Burkholderia cenocepacia AU 1054 4096055 YP_622929.1 CDS Bcen_3060 NC_008061.1 81256 82050 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0341 transcriptional regulator, AraC family; AraC family transcriptional regulator 81256..82050 Burkholderia cenocepacia AU 1054 4096056 YP_622930.1 CDS Bcen_3061 NC_008061.1 82136 82399 R KEGG: bur:Bcep18194_B0342 hypothetical protein; hypothetical protein complement(82136..82399) Burkholderia cenocepacia AU 1054 4096057 YP_622931.1 CDS Bcen_3062 NC_008061.1 82682 84574 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B0343 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase complement(82682..84574) Burkholderia cenocepacia AU 1054 4096058 YP_622932.1 CDS Bcen_3063 NC_008061.1 84832 85287 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 84832..85287 Burkholderia cenocepacia AU 1054 4096059 YP_622933.1 CDS Bcen_3064 NC_008061.1 85284 86138 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 85284..86138 Burkholderia cenocepacia AU 1054 4096060 YP_622934.1 CDS Bcen_3065 NC_008061.1 86172 87515 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0346 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 86172..87515 Burkholderia cenocepacia AU 1054 4096061 YP_622935.1 CDS Bcen_3066 NC_008061.1 87619 88728 R catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate; 2-aminoethylphosphonate--pyruvate transaminase complement(87619..88728) Burkholderia cenocepacia AU 1054 4096062 YP_622936.1 CDS Bcen_3067 NC_008061.1 88989 90080 D TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_B0348 thiamine ABC transporter periplasmic binding protein; ABC transporter periplasmic-binding protein 88989..90080 Burkholderia cenocepacia AU 1054 4096121 YP_622937.1 CDS Bcen_3068 NC_008061.1 90115 91218 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0349 ABC transporter, ATPase subunit; ABC transporter 90115..91218 Burkholderia cenocepacia AU 1054 4096122 YP_622938.1 CDS Bcen_3069 NC_008061.1 91238 92116 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0350 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 91238..92116 Burkholderia cenocepacia AU 1054 4096123 YP_622939.1 CDS Bcen_3070 NC_008061.1 92106 92966 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0351 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 92106..92966 Burkholderia cenocepacia AU 1054 4096124 YP_622940.1 CDS Bcen_3071 NC_008061.1 92963 94273 D TIGRFAM: Phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bur:Bcep18194_B0352 type I phosphodiesterase/nucleotide pyrophosphatase; phosphonoacetate hydrolase 92963..94273 Burkholderia cenocepacia AU 1054 4096125 YP_622941.1 CDS Bcen_3072 NC_008061.1 94273 95724 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B0353 aldehyde dehydrogenase; aldehyde dehydrogenase 94273..95724 Burkholderia cenocepacia AU 1054 4096126 YP_622942.1 CDS Bcen_3073 NC_008061.1 95729 96283 D KEGG: bur:Bcep18194_B0354 HD phosphohydrolase-like; HD phosphohydrolase-like protein 95729..96283 Burkholderia cenocepacia AU 1054 4096127 YP_622943.1 CDS Bcen_3074 NC_008061.1 102612 104036 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0355 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 102612..104036 Burkholderia cenocepacia AU 1054 4096133 YP_622944.1 CDS Bcen_3075 NC_008061.1 104290 105051 R KEGG: bur:Bcep18194_B0356 hypothetical protein; hypothetical protein complement(104290..105051) Burkholderia cenocepacia AU 1054 4096134 YP_622945.1 CDS Bcen_3076 NC_008061.1 105370 106962 R PFAM: phosphate transporter; KEGG: bur:Bcep18194_B0357 phosphate transporter; phosphate transporter complement(105370..106962) Burkholderia cenocepacia AU 1054 4096135 YP_622946.1 CDS Bcen_3077 NC_008061.1 107127 107717 R PFAM: Phosphoglycerate mutase; KEGG: bur:Bcep18194_B0358 phosphoglycerate/bisphosphoglycerate mutase; phosphoglycerate mutase complement(107127..107717) Burkholderia cenocepacia AU 1054 4095986 YP_622947.1 CDS Bcen_3078 NC_008061.1 107940 108149 D KEGG: bur:Bcep18194_B0359 hypothetical protein; hypothetical protein 107940..108149 Burkholderia cenocepacia AU 1054 4095987 YP_622948.1 CDS Bcen_3079 NC_008061.1 108163 108885 D KEGG: bur:Bcep18194_B0360 hypothetical protein; hypothetical protein 108163..108885 Burkholderia cenocepacia AU 1054 4095988 YP_622949.1 CDS Bcen_3080 NC_008061.1 108909 109817 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0361 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(108909..109817) Burkholderia cenocepacia AU 1054 4095989 YP_622950.1 CDS Bcen_3081 NC_008061.1 109945 112239 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 109945..112239 Burkholderia cenocepacia AU 1054 4095990 YP_622951.1 CDS Bcen_3082 NC_008061.1 112368 113693 R PFAM: General substrate transporter; KEGG: bur:Bcep18194_B0365 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(112368..113693) Burkholderia cenocepacia AU 1054 4095991 YP_622952.1 CDS Bcen_3083 NC_008061.1 113749 114813 R TIGRFAM: agmatinase, ; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bur:Bcep18194_B0366 agmatinase; agmatinase complement(113749..114813) Burkholderia cenocepacia AU 1054 4095992 YP_622953.1 CDS Bcen_3084 NC_008061.1 114840 115757 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0367 transcriptional regulator, LysR family; LysR family transcriptional regulator 114840..115757 Burkholderia cenocepacia AU 1054 4095993 YP_622954.1 CDS Bcen_3085 NC_008061.1 115821 116285 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_B0368 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(115821..116285) Burkholderia cenocepacia AU 1054 4095994 YP_622955.1 CDS Bcen_3086 NC_008061.1 116420 117040 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0369 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 116420..117040 Burkholderia cenocepacia AU 1054 4095995 YP_622956.1 CDS Bcen_3087 NC_008061.1 117328 118917 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: bur:Bcep18194_B0370 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 117328..118917 Burkholderia cenocepacia AU 1054 4095996 YP_622957.1 CDS Bcen_3088 NC_008061.1 118991 120667 D PFAM: peptidase S10, serine carboxypeptidase; KEGG: bur:Bcep18194_B0371 peptidase S10, serine carboxypeptidase; peptidase S10, serine carboxypeptidase 118991..120667 Burkholderia cenocepacia AU 1054 4095997 YP_622958.1 CDS nadE NC_008061.1 120743 121591 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(120743..121591) Burkholderia cenocepacia AU 1054 4095998 YP_622959.1 CDS Bcen_3090 NC_008061.1 121773 122744 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_B0373 protein of unknown function DUF6, transmembrane; hypothetical protein complement(121773..122744) Burkholderia cenocepacia AU 1054 4095999 YP_622960.1 CDS Bcen_3091 NC_008061.1 122845 123030 R KEGG: bur:Bcep18194_B0374 hypothetical protein; hypothetical protein complement(122845..123030) Burkholderia cenocepacia AU 1054 4096000 YP_622961.1 CDS Bcen_3092 NC_008061.1 123260 124018 D PFAM: regulatory protein, DeoR; KEGG: bur:Bcep18194_B0375 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 123260..124018 Burkholderia cenocepacia AU 1054 4096001 YP_622962.1 CDS Bcen_3093 NC_008061.1 124124 125920 D PFAM: phospholipase D/Transphosphatidylase; KEGG: bur:Bcep18194_B0376 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 124124..125920 Burkholderia cenocepacia AU 1054 4096002 YP_622963.1 CDS Bcen_3094 NC_008061.1 125985 126698 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B0377 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(125985..126698) Burkholderia cenocepacia AU 1054 4096003 YP_622964.1 CDS Bcen_3095 NC_008061.1 126786 128054 R PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B0378 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(126786..128054) Burkholderia cenocepacia AU 1054 4096004 YP_622965.1 CDS Bcen_3096 NC_008061.1 128188 129768 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0379 amino acid transporter; amino acid permease complement(128188..129768) Burkholderia cenocepacia AU 1054 4095868 YP_622966.1 CDS Bcen_3097 NC_008061.1 130400 131911 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B0380 aldehyde dehydrogenase; aldehyde dehydrogenase 130400..131911 Burkholderia cenocepacia AU 1054 4095869 YP_622967.1 CDS Bcen_3098 NC_008061.1 131994 132323 D hypothetical protein 131994..132323 Burkholderia cenocepacia AU 1054 4095870 YP_622968.1 CDS Bcen_3099 NC_008061.1 132394 133761 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: sme:SMb21167 reverse transcriptasematurase protein; RNA-directed DNA polymerase 132394..133761 Burkholderia cenocepacia AU 1054 4095871 YP_622969.1 CDS Bcen_3100 NC_008061.1 133905 136367 R PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_B0381 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel complement(133905..136367) Burkholderia cenocepacia AU 1054 4095872 YP_622970.1 CDS Bcen_3101 NC_008061.1 136824 138242 D PFAM: General substrate transporter; KEGG: bur:Bcep18194_B0382 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 136824..138242 Burkholderia cenocepacia AU 1054 4095873 YP_622971.1 CDS Bcen_3102 NC_008061.1 138640 139965 D KEGG: bur:Bcep18194_B0384 hypothetical protein; hypothetical protein 138640..139965 Burkholderia cenocepacia AU 1054 4095874 YP_622972.1 CDS Bcen_3103 NC_008061.1 140127 141239 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B0385 outer membrane protein (porin); porin 140127..141239 Burkholderia cenocepacia AU 1054 4095875 YP_622973.1 CDS Bcen_3104 NC_008061.1 141250 142302 D TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: bur:Bcep18194_B0386 inosine/uridine-preferring nucleoside hydrolase; twin-arginine translocation pathway signal 141250..142302 Burkholderia cenocepacia AU 1054 4095876 YP_622974.1 CDS Bcen_3105 NC_008061.1 142337 143314 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0387 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(142337..143314) Burkholderia cenocepacia AU 1054 4095877 YP_622975.1 CDS Bcen_3106 NC_008061.1 143340 144689 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_B0388 xanthine/uracil/vitamin C transporter; xanthine/uracil/vitamin C permease 143340..144689 Burkholderia cenocepacia AU 1054 4095878 YP_622976.1 CDS Bcen_3107 NC_008061.1 144735 145835 D KEGG: bur:Bcep18194_B0389 adenosine deaminase TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 144735..145835 Burkholderia cenocepacia AU 1054 4095879 YP_622977.1 CDS Bcen_3108 NC_008061.1 145870 148101 R PFAM: glycosyl transferase, family 51; KEGG: bur:Bcep18194_B0392 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase complement(145870..148101) Burkholderia cenocepacia AU 1054 4095880 YP_622978.1 CDS Bcen_3109 NC_008061.1 148226 149734 R PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B0395 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator complement(148226..149734) Burkholderia cenocepacia AU 1054 4095881 YP_622979.1 CDS Bcen_3110 NC_008061.1 149858 150496 D PFAM: Negative transcriptional regulator; KEGG: bur:Bcep18194_B0396 negative transcriptional regulator; negative transcriptional regulator 149858..150496 Burkholderia cenocepacia AU 1054 4095882 YP_622980.1 CDS Bcen_3111 NC_008061.1 150549 151130 R PFAM: Redoxin; KEGG: bur:Bcep18194_B0397 hypothetical protein; redoxin complement(150549..151130) Burkholderia cenocepacia AU 1054 4095883 YP_622981.1 CDS Bcen_3112 NC_008061.1 151366 152106 D PFAM: response regulator receiver; KEGG: bur:Bcep18194_B0398 two component transcriptional regulator, winged helix family; two component transcriptional regulator 151366..152106 Burkholderia cenocepacia AU 1054 4095884 YP_622982.1 CDS Bcen_3113 NC_008061.1 152103 153425 D PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_B0399 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 152103..153425 Burkholderia cenocepacia AU 1054 4095885 YP_622983.1 CDS Bcen_3114 NC_008061.1 153507 154118 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B0400 alpha/beta hydrolase; alpha/beta hydrolase complement(153507..154118) Burkholderia cenocepacia AU 1054 4095886 YP_622984.1 CDS Bcen_3115 NC_008061.1 154177 154911 R PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B0401 metallophosphoesterase; metallophosphoesterase complement(154177..154911) Burkholderia cenocepacia AU 1054 4095887 YP_622985.1 CDS Bcen_3116 NC_008061.1 155022 155558 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0402 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(155022..155558) Burkholderia cenocepacia AU 1054 4095771 YP_622986.1 CDS Bcen_3117 NC_008061.1 155571 156203 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0403 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA complement(155571..156203) Burkholderia cenocepacia AU 1054 4095772 YP_622987.1 CDS Bcen_3118 NC_008061.1 156522 157574 R PFAM: transposase, IS891/IS1136/IS1341; KEGG: noc:Noc_1587 transposase; transposase, IS605 OrfB complement(156522..157574) Burkholderia cenocepacia AU 1054 4095773 YP_622988.1 CDS Bcen_3119 NC_008061.1 157592 158857 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B0404 outer membrane protein (porin); porin 157592..158857 Burkholderia cenocepacia AU 1054 4095774 YP_622989.1 CDS Bcen_3120 NC_008061.1 159482 161407 D KEGG: bur:Bcep18194_B0407 hypothetical protein; hypothetical protein 159482..161407 Burkholderia cenocepacia AU 1054 4095775 YP_622990.1 CDS Bcen_3121 NC_008061.1 161421 163589 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; KEGG: bur:Bcep18194_B0414 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(161421..163589) Burkholderia cenocepacia AU 1054 4095776 YP_622991.1 CDS Bcen_3122 NC_008061.1 163990 164436 D KEGG: bur:Bcep18194_B0415 hypothetical protein; hypothetical protein 163990..164436 Burkholderia cenocepacia AU 1054 4095777 YP_622992.1 CDS Bcen_3123 NC_008061.1 164615 165580 R PFAM: ferredoxin; KEGG: bur:Bcep18194_B0419 ferredoxin/oxidoreductase FAD/NAD(P)-binding; ferredoxin complement(164615..165580) Burkholderia cenocepacia AU 1054 4095778 YP_622993.1 CDS Bcen_3124 NC_008061.1 165577 166656 R PFAM: Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_B0420 Rieske (2Fe-2S) protein; Rieske (2Fe-2S) protein complement(165577..166656) Burkholderia cenocepacia AU 1054 4095779 YP_622994.1 CDS Bcen_3125 NC_008061.1 166858 167346 D PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B0421 transcriptional regulator, MarR family; MarR family transcriptional regulator 166858..167346 Burkholderia cenocepacia AU 1054 4095780 YP_622995.1 CDS Bcen_3126 NC_008061.1 167401 168147 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B0422 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(167401..168147) Burkholderia cenocepacia AU 1054 4095781 YP_622996.1 CDS Bcen_3127 NC_008061.1 168318 169499 D PFAM: acyl-CoA dehydrogenase-like; KEGG: bur:Bcep18194_B0423 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 168318..169499 Burkholderia cenocepacia AU 1054 4095782 YP_622997.1 CDS Bcen_3128 NC_008061.1 169530 171137 D PFAM: carboxyl transferase; KEGG: bur:Bcep18194_B0424 propionyl-CoA carboxylase; propionyl-CoA carboxylase 169530..171137 Burkholderia cenocepacia AU 1054 4095783 YP_622998.1 CDS Bcen_3129 NC_008061.1 171157 171942 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 171157..171942 Burkholderia cenocepacia AU 1054 4095784 YP_622999.1 CDS Bcen_3130 NC_008061.1 171979 173976 D PFAM: biotin/lipoyl attachment; KEGG: bur:Bcep18194_B0426 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase subunit L 171979..173976 Burkholderia cenocepacia AU 1054 4095785 YP_623000.1 CDS Bcen_3131 NC_008061.1 174492 175595 R PFAM: transposase, IS4; KEGG: gsu:GSU2597 ISGsu2, transposase; transposase, IS4 complement(174492..175595) Burkholderia cenocepacia AU 1054 4095786 YP_623001.1 CDS Bcen_3132 NC_008061.1 175916 178030 D KEGG: bur:Bcep18194_B0428 phosphoesterase TIGRFAM: Twin-arginine translocation pathway signal; PFAM: phosphoesterase; protein of unknown function DUF756; twin-arginine translocation pathway signal 175916..178030 Burkholderia cenocepacia AU 1054 4095787 YP_623002.1 CDS Bcen_3133 NC_008061.1 178118 179503 R KEGG: bur:Bcep18194_B0430 hypothetical protein; hypothetical protein complement(178118..179503) Burkholderia cenocepacia AU 1054 4095788 YP_623003.1 CDS Bcen_3134 NC_008061.1 179845 180987 D KEGG: bur:Bcep18194_B0432 hypothetical protein; hypothetical protein 179845..180987 Burkholderia cenocepacia AU 1054 4095789 YP_623004.1 CDS Bcen_3135 NC_008061.1 181202 181576 R hypothetical protein complement(181202..181576) Burkholderia cenocepacia AU 1054 4095692 YP_623005.1 CDS Bcen_3136 NC_008061.1 181775 182578 D PFAM: EAL; KEGG: bur:Bcep18194_B0433 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 181775..182578 Burkholderia cenocepacia AU 1054 4095693 YP_623006.1 CDS Bcen_3137 NC_008061.1 182575 183066 D KEGG: bur:Bcep18194_B0434 hypothetical protein; hypothetical protein 182575..183066 Burkholderia cenocepacia AU 1054 4095694 YP_623007.1 CDS Bcen_3138 NC_008061.1 183124 185097 R TIGRFAM: Methyltransferase FkbM; KEGG: bur:Bcep18194_B0435 methyltransferase FkbM family; methyltransferase FkbM complement(183124..185097) Burkholderia cenocepacia AU 1054 4095695 YP_623008.1 CDS Bcen_3139 NC_008061.1 185122 186258 R KEGG: bur:Bcep18194_B0436 hypothetical protein; hypothetical protein complement(185122..186258) Burkholderia cenocepacia AU 1054 4095696 YP_623009.1 CDS Bcen_3140 NC_008061.1 186292 186759 R KEGG: bur:Bcep18194_B0437 hypothetical protein; hypothetical protein complement(186292..186759) Burkholderia cenocepacia AU 1054 4095697 YP_623010.1 CDS Bcen_3141 NC_008061.1 186786 187940 R KEGG: bur:Bcep18194_B0438 hypothetical protein; hypothetical protein complement(186786..187940) Burkholderia cenocepacia AU 1054 4095698 YP_623011.1 CDS Bcen_3142 NC_008061.1 187955 189100 R KEGG: bur:Bcep18194_B0439 hypothetical protein; hypothetical protein complement(187955..189100) Burkholderia cenocepacia AU 1054 4095699 YP_623012.1 CDS Bcen_3143 NC_008061.1 189501 190166 R PFAM: OmpA/MotB; KEGG: bur:Bcep18194_B0440 outer membrane protein, OmpA/MotB family; OmpA/MotB complement(189501..190166) Burkholderia cenocepacia AU 1054 4095700 YP_623013.1 CDS Bcen_3144 NC_008061.1 190287 198473 R PFAM: Haemagluttinin motif; KEGG: bur:Bcep18194_B0441 outer membrane protein, haemagluttinin-like; hemagluttinin motif-containing protein complement(190287..198473) Burkholderia cenocepacia AU 1054 4095701 YP_623014.1 CDS Bcen_3145 NC_008061.1 199436 200338 R KEGG: bur:Bcep18194_B0443 hypothetical protein; hypothetical protein complement(199436..200338) Burkholderia cenocepacia AU 1054 4095702 YP_623015.1 CDS Bcen_3146 NC_008061.1 200868 201353 D KEGG: mag:amb1130 hypothetical protein; AsnC family transcriptional regulator 200868..201353 Burkholderia cenocepacia AU 1054 4095703 YP_623016.1 CDS Bcen_3147 NC_008061.1 201709 202755 R PFAM: AAA ATPase, central region; SMART: ATPase; KEGG: bur:Bcep18194_A6396 AAA ATPase, central region; AAA ATPase complement(201709..202755) Burkholderia cenocepacia AU 1054 4095704 YP_623017.1 CDS Bcen_3148 NC_008061.1 203578 203985 D SMART: Helix-turn-helix type 3; KEGG: sme:SMc02783 hypothetical protein; XRE family transcriptional regulator 203578..203985 Burkholderia cenocepacia AU 1054 4095705 YP_623018.1 CDS Bcen_3149 NC_008061.1 204169 205176 D hypothetical protein 204169..205176 Burkholderia cenocepacia AU 1054 4095706 YP_623019.1 CDS Bcen_3150 NC_008061.1 205176 207164 D PFAM: Integrase, catalytic region; KEGG: ppr:PBPRA0979 transposase; integrase catalytic subunit 205176..207164 Burkholderia cenocepacia AU 1054 4095707 YP_623020.1 CDS Bcen_3151 NC_008061.1 207209 208147 D KEGG: vpa:VPA1394 transposition protein; hypothetical protein 207209..208147 Burkholderia cenocepacia AU 1054 4095708 YP_623021.1 CDS Bcen_3152 NC_008061.1 208232 209173 D KEGG: pst:PSPTO0030 hypothetical protein; hypothetical protein 208232..209173 Burkholderia cenocepacia AU 1054 4095709 YP_623022.1 CDS Bcen_3153 NC_008061.1 209274 210059 D KEGG: mlo:mll9366 hypothetical protein; hypothetical protein 209274..210059 Burkholderia cenocepacia AU 1054 4095710 YP_623023.1 CDS Bcen_3154 NC_008061.1 210172 210474 R PFAM: histone-like nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_C7449 histone-like nucleoid-structuring protein H-NS; histone-like nucleoid-structuring protein H-NS complement(210172..210474) Burkholderia cenocepacia AU 1054 4095711 YP_623024.1 CDS Bcen_3155 NC_008061.1 210785 212671 D PFAM: KAP P-loop; KEGG: xcb:XC_2443 hypothetical protein; KAP P-loop protein 210785..212671 Burkholderia cenocepacia AU 1054 4095356 YP_623025.1 CDS Bcen_3156 NC_008061.1 212671 213492 D KEGG: xcb:XC_2442 hypothetical protein; hypothetical protein 212671..213492 Burkholderia cenocepacia AU 1054 4095357 YP_623026.1 CDS Bcen_3157 NC_008061.1 213489 214775 D KEGG: noc:Noc_0663 hypothetical protein; hypothetical protein 213489..214775 Burkholderia cenocepacia AU 1054 4095358 YP_623027.1 CDS Bcen_3158 NC_008061.1 214772 215506 D PFAM: TatD-related deoxyribonuclease; KEGG: atc:AGR_pAT_25 Mg-dependent DNase; TatD-related deoxyribonuclease 214772..215506 Burkholderia cenocepacia AU 1054 4095359 YP_623028.1 CDS Bcen_3159 NC_008061.1 215598 216410 D KEGG: sas:SAS0037 hypothetical protein; hypothetical protein 215598..216410 Burkholderia cenocepacia AU 1054 4095360 YP_623029.1 CDS Bcen_3160 NC_008061.1 217020 217970 D PFAM: helix-turn-helix, AraC type; KEGG: sme:SMb20215 transcriptional regulator protein; AraC family transcriptional regulator 217020..217970 Burkholderia cenocepacia AU 1054 4095361 YP_623030.1 CDS Bcen_3161 NC_008061.1 218052 218867 D PFAM: alpha/beta hydrolase fold; KEGG: mlo:mll1328 hypothetical protein; alpha/beta hydrolase 218052..218867 Burkholderia cenocepacia AU 1054 4095362 YP_623031.1 CDS Bcen_3162 NC_008061.1 219057 219815 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pfo:Pfl_2715 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 219057..219815 Burkholderia cenocepacia AU 1054 4095363 YP_623032.1 CDS Bcen_3163 NC_008061.1 219847 221076 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr7376 integral membrane transporter protein; major facilitator transporter 219847..221076 Burkholderia cenocepacia AU 1054 4095364 YP_623033.1 CDS Bcen_3164 NC_008061.1 221196 221735 D TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_C7058 alkylhydroperoxidase like protein; alkylhydroperoxidase AhpD core 221196..221735 Burkholderia cenocepacia AU 1054 4095365 YP_623034.1 CDS Bcen_3165 NC_008061.1 221957 222238 D hypothetical protein 221957..222238 Burkholderia cenocepacia AU 1054 4095366 YP_623035.1 CDS Bcen_3166 NC_008061.1 222318 223256 R PFAM: helix-turn-helix, AraC type; KEGG: pfo:Pfl_2717 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(222318..223256) Burkholderia cenocepacia AU 1054 4095367 YP_623036.1 CDS Bcen_3167 NC_008061.1 223758 224327 D KEGG: bte:BTH_II0087 transposase; hypothetical protein 223758..224327 Burkholderia cenocepacia AU 1054 4095368 YP_623037.1 CDS Bcen_3168 NC_008061.1 224684 225403 D KEGG: mtc:MT1784 hypothetical protein; hypothetical protein 224684..225403 Burkholderia cenocepacia AU 1054 4095369 YP_623038.1 CDS Bcen_3169 NC_008061.1 225849 228035 D KEGG: reu:Reut_A1741 fungal/archaeal/bacterial haem catalase/peroxidase TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI 225849..228035 Burkholderia cenocepacia AU 1054 4095370 YP_623039.1 CDS Bcen_3170 NC_008061.1 228138 228971 D PFAM: alpha/beta hydrolase fold; KEGG: cpo; non-heme chloroperoxidase; alpha/beta hydrolase 228138..228971 Burkholderia cenocepacia AU 1054 4095371 YP_623040.1 CDS Bcen_3171 NC_008061.1 229174 230268 D PFAM: regulatory protein, LysR; KEGG: dar:Daro_3831 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 229174..230268 Burkholderia cenocepacia AU 1054 4095372 YP_623041.1 CDS Bcen_3172 NC_008061.1 230592 232280 R PFAM: cyclic nucleotide-binding; KEGG: reu:Reut_B4454 thioredoxin-disulfide reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(230592..232280) Burkholderia cenocepacia AU 1054 4095373 YP_623042.1 CDS Bcen_3173 NC_008061.1 232891 233346 D PFAM: ferredoxin; KEGG: bur:Bcep18194_B1603 (2Fe-2S)-binding protein; (2Fe-2S)-binding protein 232891..233346 Burkholderia cenocepacia AU 1054 4095374 YP_623043.1 CDS Bcen_3174 NC_008061.1 233348 235582 D KEGG: bur:Bcep18194_B1602 aldehyde oxidase TIGRFAM: Twin-arginine translocation pathway signal; PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; twin-arginine translocation pathway signal 233348..235582 Burkholderia cenocepacia AU 1054 4095554 YP_623044.1 CDS Bcen_3175 NC_008061.1 235598 236896 D PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_B1601 cytochrome c, class I; cytochrome c, class I 235598..236896 Burkholderia cenocepacia AU 1054 4095555 YP_623045.1 CDS Bcen_3176 NC_008061.1 237573 238007 R hypothetical protein complement(237573..238007) Burkholderia cenocepacia AU 1054 4095556 YP_623046.1 CDS Bcen_3177 NC_008061.1 238280 238651 D PFAM: transport-associated; KEGG: bur:Bcep18194_B3042 hypothetical protein; transport-associated 238280..238651 Burkholderia cenocepacia AU 1054 4095557 YP_623047.1 CDS Bcen_3178 NC_008061.1 239203 240267 D PFAM: regulatory protein, LysR; KEGG: bte:BTH_II2108 transcriptional regulator, LysR family; LysR family transcriptional regulator 239203..240267 Burkholderia cenocepacia AU 1054 4095558 YP_623048.1 CDS Bcen_3179 NC_008061.1 240504 240902 D PFAM: response regulator receiver; KEGG: bja:blr0259 two-component response regulator; response regulator receiver protein 240504..240902 Burkholderia cenocepacia AU 1054 4095559 YP_623049.1 CDS Bcen_3180 NC_008061.1 240942 242840 D PFAM: ATP-binding region, ATPase-like; KEGG: bja:blr4773 two-component hybrid sensor and regulator; multi-sensor signal transduction histidine kinase 240942..242840 Burkholderia cenocepacia AU 1054 4095560 YP_623050.1 CDS Bcen_3181 NC_008061.1 242833 243477 D PFAM: regulatory protein, LuxR; KEGG: pfo:Pfl_2459 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 242833..243477 Burkholderia cenocepacia AU 1054 4095561 YP_623051.1 CDS Bcen_3182 NC_008061.1 243629 244954 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0475 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(243629..244954) Burkholderia cenocepacia AU 1054 4095562 YP_623052.1 CDS Bcen_3183 NC_008061.1 246132 247430 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: lpp:lpp0314 hypothetical protein; pyridine nucleotide-disulfide oxidoreductase dimerisation subunit 246132..247430 Burkholderia cenocepacia AU 1054 4095563 YP_623053.1 CDS Bcen_3184 NC_008061.1 247711 248268 R hypothetical protein complement(247711..248268) Burkholderia cenocepacia AU 1054 4095564 YP_623054.1 CDS Bcen_3185 NC_008061.1 248326 248952 R hypothetical protein complement(248326..248952) Burkholderia cenocepacia AU 1054 4095565 YP_623055.1 CDS Bcen_3186 NC_008061.1 249001 249888 R KEGG: nmu:NmulC_2781 protein of unknown function DUF955; hypothetical protein complement(249001..249888) Burkholderia cenocepacia AU 1054 4095566 YP_623056.1 CDS Bcen_3187 NC_008061.1 249881 250204 R PFAM: helix-turn-helix motif; KEGG: nmu:NmulC_2782 helix-turn-helix motif; XRE family transcriptional regulator complement(249881..250204) Burkholderia cenocepacia AU 1054 4095567 YP_623057.1 CDS Bcen_3188 NC_008061.1 250418 250723 D hypothetical protein 250418..250723 Burkholderia cenocepacia AU 1054 4095568 YP_623058.1 CDS Bcen_3189 NC_008061.1 251272 251490 R KEGG: bur:Bcep18194_B0444 hypothetical protein; hypothetical protein complement(251272..251490) Burkholderia cenocepacia AU 1054 4095569 YP_623059.1 CDS Bcen_3190 NC_008061.1 251724 252581 R PFAM: NADPH-dependent FMN reductase; KEGG: bma:BMAA0563 NADPH-dependent FMN reductase family protein; NADPH-dependent FMN reductase complement(251724..252581) Burkholderia cenocepacia AU 1054 4095570 YP_623060.1 CDS Bcen_3191 NC_008061.1 252685 252990 R PFAM: NIPSNAP; KEGG: bur:Bcep18194_B0447 protein of unknown function DUF1099; hypothetical protein complement(252685..252990) Burkholderia cenocepacia AU 1054 4095571 YP_623061.1 CDS Bcen_3192 NC_008061.1 253284 254072 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0448 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 253284..254072 Burkholderia cenocepacia AU 1054 4095572 YP_623062.1 CDS Bcen_3194 NC_008061.1 255585 259052 R KEGG: bur:Bcep18194_B0453 membrane protein-like; hypothetical protein complement(255585..259052) Burkholderia cenocepacia AU 1054 4095967 YP_623063.1 CDS Bcen_3195 NC_008061.1 259566 260735 D KEGG: bur:Bcep18194_B0455 ABC glycine betaine/L-proline transporter, ATPase subunit TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; PFAM: ABC transporter related; SMART: ATPase; glycine betaine/L-proline ABC transporter ATP-binding protein 259566..260735 Burkholderia cenocepacia AU 1054 4095968 YP_623064.1 CDS Bcen_3196 NC_008061.1 260728 261624 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0456 ABC glycine betaine/L-proline transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 260728..261624 Burkholderia cenocepacia AU 1054 4095969 YP_623065.1 CDS Bcen_3197 NC_008061.1 261661 262728 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0457 transcriptional regulator, AraC family; AraC family transcriptional regulator 261661..262728 Burkholderia cenocepacia AU 1054 4095970 YP_623066.1 CDS Bcen_3198 NC_008061.1 262884 263780 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0458 ABC proline/glycine betaine transporter, periplasmic ligand binding protein; substrate-binding region of ABC-type glycine betaine transport system 262884..263780 Burkholderia cenocepacia AU 1054 4095971 YP_623067.1 CDS Bcen_3199 NC_008061.1 264075 264701 D PFAM: protein of unknown function UPF0126; KEGG: pfo:Pfl_3420 protein of unknown function UPF0126; hypothetical protein 264075..264701 Burkholderia cenocepacia AU 1054 4095972 YP_623068.1 CDS Bcen_3200 NC_008061.1 264711 265136 R PFAM: transmembrane pair; KEGG: bur:Bcep18194_B0461 membrane protein; transmembrane pair complement(264711..265136) Burkholderia cenocepacia AU 1054 4095973 YP_623069.1 CDS Bcen_3201 NC_008061.1 265283 266206 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0462 transcriptional regulator, LysR family; LysR family transcriptional regulator 265283..266206 Burkholderia cenocepacia AU 1054 4095974 YP_623070.1 CDS Bcen_3202 NC_008061.1 266288 267502 R KEGG: bur:Bcep18194_B0463 glycosyl hydrolase; glycosyl hydrolase complement(266288..267502) Burkholderia cenocepacia AU 1054 4095975 YP_623071.1 CDS Bcen_3203 NC_008061.1 267512 267781 R KEGG: bur:Bcep18194_B0464 hypothetical protein; hypothetical protein complement(267512..267781) Burkholderia cenocepacia AU 1054 4095976 YP_623072.1 CDS Bcen_3204 NC_008061.1 267911 268600 R PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: bur:Bcep18194_B0466 aspartyl/asparaginyl beta-hydroxylase; aspartyl/asparaginyl beta-hydroxylase complement(267911..268600) Burkholderia cenocepacia AU 1054 4095977 YP_623073.1 CDS Bcen_3205 NC_008061.1 268795 269163 D KEGG: bur:Bcep18194_B0467 hypothetical protein; hypothetical protein 268795..269163 Burkholderia cenocepacia AU 1054 4095978 YP_623074.1 CDS Bcen_3206 NC_008061.1 269199 269510 D KEGG: bur:Bcep18194_B0468 hypothetical protein; hypothetical protein 269199..269510 Burkholderia cenocepacia AU 1054 4095979 YP_623075.1 CDS Bcen_3207 NC_008061.1 269742 270713 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B0473 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(269742..270713) Burkholderia cenocepacia AU 1054 4095980 YP_623076.1 CDS Bcen_3208 NC_008061.1 270742 271518 R PFAM: Xylose isomerase-like TIM barrel; KEGG: bur:Bcep18194_B0474 hydroxypyruvate isomerase; hydroxypyruvate isomerase complement(270742..271518) Burkholderia cenocepacia AU 1054 4095981 YP_623077.1 CDS Bcen_3209 NC_008061.1 271594 272919 R PFAM: General substrate transporter; KEGG: bur:Bcep18194_B0475 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(271594..272919) Burkholderia cenocepacia AU 1054 4095982 YP_623078.1 CDS Bcen_3210 NC_008061.1 273051 273689 R PFAM: class II aldolase/adducin-like; KEGG: bur:Bcep18194_B0476 class II aldolase/adducin-like; aldolase complement(273051..273689) Burkholderia cenocepacia AU 1054 4095983 YP_623079.1 CDS Bcen_3211 NC_008061.1 273686 274987 R PFAM: type III effector Hrp-dependent outers; KEGG: bur:Bcep18194_B0477 type III effector Hrp-dependent outer proteins; Hrp-dependent type III effector protein complement(273686..274987) Burkholderia cenocepacia AU 1054 4095984 YP_623080.1 CDS Bcen_3212 NC_008061.1 275007 275897 R PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_B0478 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase complement(275007..275897) Burkholderia cenocepacia AU 1054 4095985 YP_623081.1 CDS Bcen_3213 NC_008061.1 275956 276660 R PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B0479 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(275956..276660) Burkholderia cenocepacia AU 1054 4095433 YP_623082.1 CDS Bcen_3214 NC_008061.1 276851 277933 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0484 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(276851..277933) Burkholderia cenocepacia AU 1054 4095434 YP_623083.1 CDS Bcen_3215 NC_008061.1 278007 279596 D KEGG: sdaA; L-serine ammonia-lyase TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 278007..279596 Burkholderia cenocepacia AU 1054 4095435 YP_623084.1 CDS Bcen_3216 NC_008061.1 279590 280855 D TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B0486 sarcosine oxidase, beta subunit, heterotetrameric; sarcosine oxidase subunit beta 279590..280855 Burkholderia cenocepacia AU 1054 4095436 YP_623085.1 CDS Bcen_3217 NC_008061.1 280877 281176 D PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; KEGG: bur:Bcep18194_B0487 sarcosine oxidase, delta subunit, heterotetrameric; sarcosine oxidase, delta subunit, heterotetrameric 280877..281176 Burkholderia cenocepacia AU 1054 4095437 YP_623086.1 CDS Bcen_3218 NC_008061.1 281173 284184 D KEGG: bur:Bcep18194_B0488 sarcosine oxidase, alpha subunit, heterotetrameric TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; sarcosine oxidase subunit alpha 281173..284184 Burkholderia cenocepacia AU 1054 4095438 YP_623087.1 CDS Bcen_3219 NC_008061.1 284174 284806 D PFAM: Sarcosine oxidase, gamma subunit; KEGG: bur:Bcep18194_B0489 sarcosine oxidase, gamma subunit; sarcosine oxidase, gamma subunit 284174..284806 Burkholderia cenocepacia AU 1054 4095439 YP_623088.1 CDS Bcen_3220 NC_008061.1 284803 285243 D TIGRFAM: Dihydroneopterin aldolase; KEGG: bur:Bcep18194_B0490 dihydroneopterin aldolase; dihydroneopterin aldolase 284803..285243 Burkholderia cenocepacia AU 1054 4095440 YP_623089.1 CDS Bcen_3221 NC_008061.1 285344 286030 R PFAM: Lytic transglycosylase, catalytic; KEGG: bur:Bcep18194_B0495 lytic transglycosylase, catalytic; lytic transglycosylase, catalytic complement(285344..286030) Burkholderia cenocepacia AU 1054 4095441 YP_623090.1 CDS Bcen_3222 NC_008061.1 286304 286699 R KEGG: sco:SCO2860 rifampin ADP-ribosyl transferase; rifampin ADP-ribosyl transferase complement(286304..286699) Burkholderia cenocepacia AU 1054 4095442 YP_623091.1 CDS Bcen_3223 NC_008061.1 286732 287499 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0496 ABC proline/glycine betaine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(286732..287499) Burkholderia cenocepacia AU 1054 4095443 YP_623092.1 CDS Bcen_3224 NC_008061.1 287496 288449 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0497 ABC proline/glycine betaine transporter, ATPase subunit; ABC transporter complement(287496..288449) Burkholderia cenocepacia AU 1054 4095444 YP_623093.1 CDS Bcen_3225 NC_008061.1 288446 289624 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0498 ABC proline/glycine betaine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(288446..289624) Burkholderia cenocepacia AU 1054 4095445 YP_623094.1 CDS Bcen_3226 NC_008061.1 289621 290544 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0499 ABC glycine betaine/choline transporter, periplasmic ligand binding protein; substrate-binding region of ABC-type glycine betaine transport system complement(289621..290544) Burkholderia cenocepacia AU 1054 4095446 YP_623095.1 CDS Bcen_3227 NC_008061.1 290712 291641 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: bur:Bcep18194_B0500 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 290712..291641 Burkholderia cenocepacia AU 1054 4095447 YP_623096.1 CDS Bcen_3228 NC_008061.1 291663 292031 R PFAM: NUDIX hydrolase; KEGG: mth:MTH1336 mutator MutT protein homolog; NUDIX hydrolase complement(291663..292031) Burkholderia cenocepacia AU 1054 4095448 YP_623097.1 CDS Bcen_3229 NC_008061.1 292167 294137 R catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase complement(292167..294137) Burkholderia cenocepacia AU 1054 4095449 YP_623098.1 CDS Bcen_3230 NC_008061.1 294653 295498 D KEGG: bur:Bcep18194_B0506 hypothetical protein; hypothetical protein 294653..295498 Burkholderia cenocepacia AU 1054 4095450 YP_623099.1 CDS Bcen_3231 NC_008061.1 295534 296802 R TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_B0507 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein complement(295534..296802) Burkholderia cenocepacia AU 1054 4095451 YP_623100.1 CDS Bcen_3232 NC_008061.1 296883 297944 D PFAM: transposase, IS891/IS1136/IS1341; KEGG: noc:Noc_1587 transposase; transposase, IS605 OrfB 296883..297944 Burkholderia cenocepacia AU 1054 4095452 YP_623101.1 CDS Bcen_3233 NC_008061.1 297922 298242 D hypothetical protein 297922..298242 Burkholderia cenocepacia AU 1054 4096175 YP_623102.1 CDS Bcen_3234 NC_008061.1 298258 304260 D PFAM: alpha-2-macroglobulin-like; KEGG: bur:Bcep18194_B0508 alpha-2-macroglobulin-like large extracellular alpha-helical protein; alpha-2-macroglobulin-like protein 298258..304260 Burkholderia cenocepacia AU 1054 4096176 YP_623103.1 CDS Bcen_3235 NC_008061.1 304306 306735 D TIGRFAM: Penicillin-binding protein 1C; PFAM: glycosyl transferase, family 51; KEGG: bur:Bcep18194_B0509 penicillin-binding protein 1C; penicillin-binding protein 1C 304306..306735 Burkholderia cenocepacia AU 1054 4096177 YP_623104.1 CDS Bcen_3236 NC_008061.1 306760 308190 R PFAM: chemotaxis sensory transducer; KEGG: bja:bll1532 chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(306760..308190) Burkholderia cenocepacia AU 1054 4096178 YP_623105.1 CDS Bcen_3237 NC_008061.1 308417 309487 R KEGG: bur:Bcep18194_B1202 outer membrane protein (porin); outer membrane protein (porin) complement(308417..309487) Burkholderia cenocepacia AU 1054 4096179 YP_623106.2 CDS Bcen_3238 NC_008061.1 309705 311699 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(309705..311699) Burkholderia cenocepacia AU 1054 4096180 YP_623107.1 CDS Bcen_3239 NC_008061.1 311936 313822 R PFAM: sigma-70 region 3; KEGG: reu:Reut_A1750 sigma-70 region 1.2; RNA polymerase subunit sigma 28 complement(311936..313822) Burkholderia cenocepacia AU 1054 4096181 YP_623108.1 CDS Bcen_3240 NC_008061.1 313806 314120 R PFAM: High potential iron-sulfur protein; KEGG: bur:Bcep18194_C7357 high potential iron-sulfur protein; high potential iron-sulfur protein complement(313806..314120) Burkholderia cenocepacia AU 1054 4096182 YP_623109.1 CDS Bcen_3241 NC_008061.1 314219 315466 R SMART: extracellular solute-binding protein, family 3; KEGG: bja:bll0332 hypothetical protein; extracellular solute-binding protein complement(314219..315466) Burkholderia cenocepacia AU 1054 4096183 YP_623110.1 CDS Bcen_3242 NC_008061.1 315495 317216 R PFAM: Pyrrolo-quinoline quinone; KEGG: ppu:PP2679 quinoprotein ethanol dehydrogenase; Pyrrolo-quinoline quinone complement(315495..317216) Burkholderia cenocepacia AU 1054 4096184 YP_623111.1 CDS Bcen_3243 NC_008061.1 317648 319981 D PFAM: TonB-dependent receptor; KEGG: dar:Daro_1028 TonB-dependent receptor; TonB-dependent receptor 317648..319981 Burkholderia cenocepacia AU 1054 4096185 YP_623112.1 CDS Bcen_3244 NC_008061.1 320051 321067 R PFAM: alpha/beta hydrolase fold; KEGG: dar:Daro_1698 peptidase S33, proline iminopeptidase 1; prolyl aminopeptidase complement(320051..321067) Burkholderia cenocepacia AU 1054 4096186 YP_623113.1 CDS Bcen_3245 NC_008061.1 321382 323424 D PFAM: sigma-54 factor, interaction region; SMART: ATPase; KEGG: reu:Reut_A1778 helix-turn-helix, fis-type; Fis family GAF modulated sigma54 specific transcriptional regulator 321382..323424 Burkholderia cenocepacia AU 1054 4096187 YP_623114.1 CDS Bcen_3246 NC_008061.1 323878 324801 D possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 323878..324801 Burkholderia cenocepacia AU 1054 4096188 YP_623115.1 CDS Bcen_3247 NC_008061.1 324804 325523 D Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 324804..325523 Burkholderia cenocepacia AU 1054 4096189 YP_623116.1 CDS Bcen_3248 NC_008061.1 325520 325801 D PFAM: coenzyme PQQ synthesis D; KEGG: dar:Daro_1701 coenzyme PQQ synthesis D; coenzyme PQQ synthesis D 325520..325801 Burkholderia cenocepacia AU 1054 4096190 YP_623117.1 CDS Bcen_3249 NC_008061.1 325803 326942 D KEGG: reu:Reut_A1782 coenzyme PQQ biosynthesis protein E TIGRFAM: Coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; pyrroloquinoline quinone biosynthesis protein PqqE 325803..326942 Burkholderia cenocepacia AU 1054 4096191 YP_623118.1 CDS Bcen_3250 NC_008061.1 327208 327546 R KEGG: bur:Bcep18194_B0517 hypothetical protein; hypothetical protein complement(327208..327546) Burkholderia cenocepacia AU 1054 4096192 YP_623119.1 CDS Bcen_3251 NC_008061.1 327550 328524 D KEGG: bur:Bcep18194_B0518 hypothetical protein; hypothetical protein 327550..328524 Burkholderia cenocepacia AU 1054 4096193 YP_623120.1 CDS Bcen_3252 NC_008061.1 328732 328962 D KEGG: bur:Bcep18194_B0519 hypothetical protein; hypothetical protein 328732..328962 Burkholderia cenocepacia AU 1054 4095672 YP_623121.1 CDS Bcen_3253 NC_008061.1 329124 330011 R PFAM: esterase; KEGG: bur:Bcep18194_B0523 esterase; esterase complement(329124..330011) Burkholderia cenocepacia AU 1054 4095673 YP_623122.1 CDS Bcen_3254 NC_008061.1 330108 330848 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B0524 alpha/beta hydrolase; alpha/beta hydrolase complement(330108..330848) Burkholderia cenocepacia AU 1054 4095674 YP_623123.1 CDS Bcen_3255 NC_008061.1 330845 331651 R KEGG: bur:Bcep18194_B0525 hypothetical protein; hypothetical protein complement(330845..331651) Burkholderia cenocepacia AU 1054 4095675 YP_623124.1 CDS Bcen_3256 NC_008061.1 331747 332178 R PFAM: DGPFAETKE; KEGG: bur:Bcep18194_B0528 hypothetical protein; hypothetical protein complement(331747..332178) Burkholderia cenocepacia AU 1054 4095676 YP_623125.1 CDS Bcen_3257 NC_008061.1 332338 334107 R TIGRFAM: PAS; PFAM: response regulator receiver; KEGG: bps:BPSS1940 sensor kinase/response regulator fusion protein; PAS/PAC sensor hybrid histidine kinase complement(332338..334107) Burkholderia cenocepacia AU 1054 4095677 YP_623126.1 CDS Bcen_3258 NC_008061.1 334263 334493 D KEGG: bur:Bcep18194_B0537 hypothetical protein; hypothetical protein 334263..334493 Burkholderia cenocepacia AU 1054 4095678 YP_623127.1 CDS Bcen_3259 NC_008061.1 334684 336108 R PFAM: General substrate transporter; KEGG: bur:Bcep18194_B0539 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(334684..336108) Burkholderia cenocepacia AU 1054 4095679 YP_623128.1 CDS Bcen_3260 NC_008061.1 336270 337031 R PFAM: ABC-2 type transporter; KEGG: bur:Bcep18194_B0540 ABC transporter, inner membrane subunit; ABC-2 type transporter complement(336270..337031) Burkholderia cenocepacia AU 1054 4095680 YP_623129.1 CDS Bcen_3261 NC_008061.1 337028 337981 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0541 ABC transporter, ATPase subunit; ABC transporter complement(337028..337981) Burkholderia cenocepacia AU 1054 4095681 YP_623130.1 CDS Bcen_3262 NC_008061.1 338406 338702 D PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_B0543 hypothetical protein; cupin 338406..338702 Burkholderia cenocepacia AU 1054 4095682 YP_623131.1 CDS Bcen_3263 NC_008061.1 339319 340917 D KEGG: bur:Bcep18194_B0544 hypothetical protein; hypothetical protein 339319..340917 Burkholderia cenocepacia AU 1054 4095683 YP_623132.1 CDS Bcen_3264 NC_008061.1 340989 342242 D KEGG: bur:Bcep18194_B0545 hypothetical protein; hypothetical protein 340989..342242 Burkholderia cenocepacia AU 1054 4095684 YP_623133.1 CDS Bcen_3265 NC_008061.1 342316 343140 D PFAM: OmpW; KEGG: bur:Bcep18194_B0546 OmpW family protein; OmpW 342316..343140 Burkholderia cenocepacia AU 1054 4095685 YP_623134.1 CDS Bcen_3266 NC_008061.1 343262 343765 D KEGG: bur:Bcep18194_B0547 hypothetical protein; hypothetical protein 343262..343765 Burkholderia cenocepacia AU 1054 4095686 YP_623135.1 CDS Bcen_3267 NC_008061.1 344174 345274 D KEGG: bur:Bcep18194_B0549 hypothetical protein; hypothetical protein 344174..345274 Burkholderia cenocepacia AU 1054 4095687 YP_623136.1 CDS Bcen_3268 NC_008061.1 345347 347047 R catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase complement(345347..347047) Burkholderia cenocepacia AU 1054 4095688 YP_623137.1 CDS Bcen_3269 NC_008061.1 347064 348533 R catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase complement(347064..348533) Burkholderia cenocepacia AU 1054 4095689 YP_623138.1 CDS Bcen_3270 NC_008061.1 348566 349150 R HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI complement(348566..349150) Burkholderia cenocepacia AU 1054 4095690 YP_623139.1 CDS Bcen_3271 NC_008061.1 349875 350777 D KEGG: bur:Bcep18194_B0556 alpha/beta hydrolase; alpha/beta hydrolase 349875..350777 Burkholderia cenocepacia AU 1054 4095691 YP_623140.1 CDS Bcen_3272 NC_008061.1 350845 351414 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bur:Bcep18194_B0557 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 350845..351414 Burkholderia cenocepacia AU 1054 4096083 YP_623141.1 CDS Bcen_3273 NC_008061.1 351432 352715 D PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: bur:Bcep18194_B0558 glycosyl transferase, family 28; glycosyl transferase family protein 351432..352715 Burkholderia cenocepacia AU 1054 4096084 YP_623142.1 CDS Bcen_3274 NC_008061.1 352712 354307 D TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0559 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 352712..354307 Burkholderia cenocepacia AU 1054 4096085 YP_623143.1 CDS Bcen_3275 NC_008061.1 354318 355256 D TIGRFAM: Rhamnosyltransferase; KEGG: bur:Bcep18194_B0560 rhamnosyltransferase; rhamnosyltransferase 354318..355256 Burkholderia cenocepacia AU 1054 4096086 YP_623144.1 CDS Bcen_3276 NC_008061.1 355268 357118 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B0561 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT 355268..357118 Burkholderia cenocepacia AU 1054 4096087 YP_623145.1 CDS Bcen_3277 NC_008061.1 357118 358308 D PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_B0562 secretion protein, HlyD family; secretion protein HlyD 357118..358308 Burkholderia cenocepacia AU 1054 4096088 YP_623146.1 CDS Bcen_3278 NC_008061.1 358537 359733 D PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B0564 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase GroES-like protein 358537..359733 Burkholderia cenocepacia AU 1054 4096089 YP_623147.1 CDS Bcen_3279 NC_008061.1 359819 360577 R KEGG: bur:Bcep18194_B0567 hypothetical protein; hypothetical protein complement(359819..360577) Burkholderia cenocepacia AU 1054 4096090 YP_623148.1 CDS Bcen_3280 NC_008061.1 360781 362217 R PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B0568 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator complement(360781..362217) Burkholderia cenocepacia AU 1054 4096091 YP_623149.1 CDS Bcen_3281 NC_008061.1 362430 363893 D PFAM: coagulation factor 5/8 type-like; KEGG: bur:Bcep18194_B0569 secreted protein; coagulation factor 5/8 type-like 362430..363893 Burkholderia cenocepacia AU 1054 4096092 YP_623150.1 CDS Bcen_3282 NC_008061.1 363949 365064 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0570 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(363949..365064) Burkholderia cenocepacia AU 1054 4096093 YP_623151.2 CDS Bcen_3283 NC_008061.1 365420 366694 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 365420..366694 Burkholderia cenocepacia AU 1054 4096094 YP_623152.1 CDS Bcen_3284 NC_008061.1 366733 367704 D PFAM: peptidase M19, renal dipeptidase; KEGG: bur:Bcep18194_B0572 membrane dipeptidase; membrane dipeptidase 366733..367704 Burkholderia cenocepacia AU 1054 4096095 YP_623153.1 CDS Bcen_3285 NC_008061.1 367843 368376 D PFAM: 4-vinyl reductase, 4VR; KEGG: bur:Bcep18194_B0573 4-vinyl reductase, 4VR; 4-vinyl reductase, 4VR 367843..368376 Burkholderia cenocepacia AU 1054 4096096 YP_623154.1 CDS Bcen_3286 NC_008061.1 368453 370516 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B0574 NADH-flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 368453..370516 Burkholderia cenocepacia AU 1054 4096097 YP_623155.1 CDS Bcen_3287 NC_008061.1 370520 372445 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: bur:Bcep18194_B0575 hypothetical protein; hypothetical protein 370520..372445 Burkholderia cenocepacia AU 1054 4096098 YP_623156.1 CDS Bcen_3288 NC_008061.1 372450 373619 D PFAM: electron transfer flavoprotein, alpha subunit; KEGG: bur:Bcep18194_B0576 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 372450..373619 Burkholderia cenocepacia AU 1054 4096099 YP_623157.1 CDS Bcen_3289 NC_008061.1 373616 374401 D PFAM: electron transfer flavoprotein beta-subunit; KEGG: bur:Bcep18194_B0577 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 373616..374401 Burkholderia cenocepacia AU 1054 4096100 YP_623158.1 CDS Bcen_3290 NC_008061.1 374455 375696 D PFAM: Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_B0578 Rieske (2Fe-2S) protein; Rieske (2Fe-2S) protein 374455..375696 Burkholderia cenocepacia AU 1054 4096101 YP_623159.1 CDS Bcen_3291 NC_008061.1 375726 376874 D PFAM: ferredoxin; KEGG: bur:Bcep18194_B0579 ferredoxin/oxidoreductase; oxidoreductase FAD-binding region 375726..376874 Burkholderia cenocepacia AU 1054 4093826 YP_623160.1 CDS Bcen_3292 NC_008061.1 377009 377872 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0580 ABC proline/glycine betaine transporter, periplasmic ligand binding protein; substrate-binding region of ABC-type glycine betaine transport system 377009..377872 Burkholderia cenocepacia AU 1054 4093827 YP_623161.1 CDS Bcen_3293 NC_008061.1 378098 379753 D PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0581 amino acid transporter; amino acid permease 378098..379753 Burkholderia cenocepacia AU 1054 4093828 YP_623162.1 CDS Bcen_3294 NC_008061.1 379864 380748 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(379864..380748) Burkholderia cenocepacia AU 1054 4093829 YP_623163.1 CDS Bcen_3295 NC_008061.1 380953 381879 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0586 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(380953..381879) Burkholderia cenocepacia AU 1054 4093830 YP_623164.1 CDS Bcen_3296 NC_008061.1 382099 383649 D PFAM: sulfatase; KEGG: bur:Bcep18194_B0587 sulfatase; sulfatase 382099..383649 Burkholderia cenocepacia AU 1054 4093831 YP_623165.1 CDS Bcen_3297 NC_008061.1 383695 384660 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0588 ABC proline/glycine betaine transporter, periplasmic ligand binding protein; substrate-binding region of ABC-type glycine betaine transport system 383695..384660 Burkholderia cenocepacia AU 1054 4093832 YP_623166.1 CDS Bcen_3298 NC_008061.1 384921 386060 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B0589 outer membrane protein (porin); porin 384921..386060 Burkholderia cenocepacia AU 1054 4093833 YP_623167.1 CDS Bcen_3299 NC_008061.1 386302 387552 D PFAM: protein of unknown function DUF894, DitE; KEGG: bur:Bcep18194_B0591 hypothetical protein; major facilitator transporter 386302..387552 Burkholderia cenocepacia AU 1054 4093834 YP_623168.1 CDS Bcen_3300 NC_008061.1 387566 387988 R PFAM: protein of unknown function DUF74; KEGG: bur:Bcep18194_B0595 protein of unknown function DUF74; hypothetical protein complement(387566..387988) Burkholderia cenocepacia AU 1054 4093835 YP_623169.1 CDS Bcen_3301 NC_008061.1 388063 389316 R PFAM: peptidase M20; KEGG: bur:Bcep18194_B0596 leucyl aminopeptidase; leucyl aminopeptidase complement(388063..389316) Burkholderia cenocepacia AU 1054 4093836 YP_623170.1 CDS Bcen_3302 NC_008061.1 389396 391108 R PFAM: Propeptide, peptidase M4 and M36; KEGG: bur:Bcep18194_B0597 propeptide, peptidase M4 and M36; propeptide, peptidase M4 and M36 complement(389396..391108) Burkholderia cenocepacia AU 1054 4093837 YP_623171.1 CDS Bcen_3303 NC_008061.1 391601 392545 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0599 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(391601..392545) Burkholderia cenocepacia AU 1054 4093838 YP_623172.1 CDS Bcen_3304 NC_008061.1 392667 393629 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0600 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(392667..393629) Burkholderia cenocepacia AU 1054 4093839 YP_623173.1 CDS Bcen_3305 NC_008061.1 393871 395028 D PFAM: methylamine dehydrogenase heavy subunit; KEGG: bur:Bcep18194_B0601 amine dehydrogenase; amine dehydrogenase 393871..395028 Burkholderia cenocepacia AU 1054 4093840 YP_623174.1 CDS Bcen_3306 NC_008061.1 395036 395590 D KEGG: bur:Bcep18194_B0602 hypothetical protein; hypothetical protein 395036..395590 Burkholderia cenocepacia AU 1054 4093841 YP_623175.1 CDS Bcen_3307 NC_008061.1 395587 396222 D TIGRFAM: Methylamine dehydrogenase accessory protein MauD; PFAM: Redoxin; KEGG: bur:Bcep18194_B0603 hypothetical protein; methylamine dehydrogenase accessory protein MauD 395587..396222 Burkholderia cenocepacia AU 1054 4093842 YP_623176.1 CDS Bcen_3308 NC_008061.1 396262 396798 D PFAM: Methylamine dehydrogenase light chain, C terminal; KEGG: bur:Bcep18194_B0604 amine dehydrogenase; amine dehydrogenase 396262..396798 Burkholderia cenocepacia AU 1054 4093843 YP_623177.1 CDS Bcen_3309 NC_008061.1 396795 397295 D PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_B0605 cytochrome c, class I; cytochrome c, class I 396795..397295 Burkholderia cenocepacia AU 1054 4093844 YP_623178.1 CDS Bcen_3310 NC_008061.1 397292 397828 D KEGG: bur:Bcep18194_B0606 cytochrome c, class I; cytochrome c, class I 397292..397828 Burkholderia cenocepacia AU 1054 4093845 YP_623179.1 CDS Bcen_3311 NC_008061.1 397862 399367 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B0607 aldehyde dehydrogenase (NAD+); aldehyde dehydrogenase 397862..399367 Burkholderia cenocepacia AU 1054 4093924 YP_623180.1 CDS Bcen_3312 NC_008061.1 399425 399928 R PFAM: protein of unknown function DUF606; KEGG: bur:Bcep18194_B0608 protein of unknown function DUF606; hypothetical protein complement(399425..399928) Burkholderia cenocepacia AU 1054 4093925 YP_623181.1 CDS Bcen_3313 NC_008061.1 399991 400872 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0609 transcriptional regulator, LysR family; LysR family transcriptional regulator 399991..400872 Burkholderia cenocepacia AU 1054 4093926 YP_623182.1 CDS Bcen_3314 NC_008061.1 400898 401239 D hypothetical protein 400898..401239 Burkholderia cenocepacia AU 1054 4093927 YP_623183.1 CDS Bcen_3315 NC_008061.1 401536 402489 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_B0611 ABC proline/glycine betaine transporter, periplasmic ligand binding protein; substrate-binding region of ABC-type glycine betaine transport system 401536..402489 Burkholderia cenocepacia AU 1054 4093928 YP_623184.1 CDS Bcen_3316 NC_008061.1 402551 403480 D PFAM: protein of unknown function DUF849; KEGG: bur:Bcep18194_B0612 protein of unknown function DUF849; hypothetical protein 402551..403480 Burkholderia cenocepacia AU 1054 4093929 YP_623185.1 CDS Bcen_3317 NC_008061.1 403571 404536 D converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 403571..404536 Burkholderia cenocepacia AU 1054 4093930 YP_623186.1 CDS Bcen_3318 NC_008061.1 404547 405035 D KEGG: bur:Bcep18194_B0614 thioesterase-like; thioesterase-like protein 404547..405035 Burkholderia cenocepacia AU 1054 4093931 YP_623187.1 CDS Bcen_3319 NC_008061.1 405086 406042 D PFAM: Alpha/beta hydrolase fold-3; KEGG: bur:Bcep18194_B0615 lipolytic enzyme; Alpha/beta hydrolase fold-3 405086..406042 Burkholderia cenocepacia AU 1054 4093932 YP_623188.1 CDS Bcen_3320 NC_008061.1 406066 407271 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_B0616 gamma-butyrobetaine,2-oxoglutarate dioxygenase; gamma-butyrobetaine,2-oxoglutarate dioxygenase 406066..407271 Burkholderia cenocepacia AU 1054 4093933 YP_623189.1 CDS Bcen_3321 NC_008061.1 407466 407768 R KEGG: bur:Bcep18194_B0617 hypothetical protein; hypothetical protein complement(407466..407768) Burkholderia cenocepacia AU 1054 4093934 YP_623190.1 CDS Bcen_3322 NC_008061.1 407983 408969 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B0618 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(407983..408969) Burkholderia cenocepacia AU 1054 4093935 YP_623191.1 CDS Bcen_3323 NC_008061.1 409140 409430 R KEGG: bur:Bcep18194_B0619 hypothetical protein; hypothetical protein complement(409140..409430) Burkholderia cenocepacia AU 1054 4093936 YP_623192.1 CDS Bcen_3324 NC_008061.1 410097 410861 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B0620 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 410097..410861 Burkholderia cenocepacia AU 1054 4093937 YP_623193.1 CDS Bcen_3325 NC_008061.1 410925 411767 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B0621 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 410925..411767 Burkholderia cenocepacia AU 1054 4093938 YP_623194.1 CDS Bcen_3326 NC_008061.1 411791 413068 D PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: bur:Bcep18194_B0622 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing-like protein 411791..413068 Burkholderia cenocepacia AU 1054 4093939 YP_623195.1 CDS Bcen_3327 NC_008061.1 413156 413932 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B0623 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 413156..413932 Burkholderia cenocepacia AU 1054 4093940 YP_623196.1 CDS Bcen_3328 NC_008061.1 413945 415483 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0624 ABC sugar transporter, ATPase subunit; ABC transporter 413945..415483 Burkholderia cenocepacia AU 1054 4093941 YP_623197.1 CDS Bcen_3329 NC_008061.1 415520 416557 D PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_B0625 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 415520..416557 Burkholderia cenocepacia AU 1054 4093942 YP_623198.1 CDS Bcen_3330 NC_008061.1 416640 417581 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_B0626 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator 416640..417581 Burkholderia cenocepacia AU 1054 4093943 YP_623199.1 CDS Bcen_3331 NC_008061.1 417651 418541 D PFAM: amidohydrolase 2; KEGG: bur:Bcep18194_B0627 amidohydrolase 2; amidohydrolase 2 417651..418541 Burkholderia cenocepacia AU 1054 4093944 YP_623200.1 CDS Bcen_3332 NC_008061.1 418610 419377 D PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B0628 transcriptional regulator, GntR family; regulatory protein GntR 418610..419377 Burkholderia cenocepacia AU 1054 4093945 YP_623201.1 CDS Bcen_3333 NC_008061.1 419560 420705 D PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mlo:mll2703 glycolate oxidase; (S)-2-hydroxy-acid oxidase 419560..420705 Burkholderia cenocepacia AU 1054 4093946 YP_623202.1 CDS Bcen_3334 NC_008061.1 420758 421999 R PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B0629 FAD dependent oxidoreductase; D-amino-acid dehydrogenase complement(420758..421999) Burkholderia cenocepacia AU 1054 4093947 YP_623203.1 CDS Bcen_3335 NC_008061.1 422115 423473 R PFAM: Amidase; KEGG: ccr:CC2613 pyrazinamidase/nicotinamidase; amidase complement(422115..423473) Burkholderia cenocepacia AU 1054 4093948 YP_623204.1 CDS Bcen_3336 NC_008061.1 423470 424621 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc2352 probable permease transmembrane protein; major facilitator transporter complement(423470..424621) Burkholderia cenocepacia AU 1054 4093949 YP_623205.1 CDS Bcen_3337 NC_008061.1 424884 426320 R PFAM: amidohydrolase; KEGG: pfl:PFL_0775 N-acyl-D-amino acid deacylase family protein; N-acyl-D-amino-acid deacylase complement(424884..426320) Burkholderia cenocepacia AU 1054 4093950 YP_623206.1 CDS Bcen_3338 NC_008061.1 426485 427372 R PFAM: regulatory protein, LysR; KEGG: pfl:PFL_2496 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(426485..427372) Burkholderia cenocepacia AU 1054 4093951 YP_623207.1 CDS Bcen_3339 NC_008061.1 427980 428504 D KEGG: bur:Bcep18194_B0643 hypothetical protein; hypothetical protein 427980..428504 Burkholderia cenocepacia AU 1054 4093952 YP_623208.1 CDS Bcen_3340 NC_008061.1 428501 429769 D TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bur:Bcep18194_B0644 diguanylate cyclase (GGDEF domain); diguanylate cyclase 428501..429769 Burkholderia cenocepacia AU 1054 4093953 YP_623209.1 CDS Bcen_3341 NC_008061.1 429856 430368 D PFAM: OmpA/MotB; KEGG: bur:Bcep18194_B0645 outer membrane protein, OmpA/MotB family; OmpA/MotB protein 429856..430368 Burkholderia cenocepacia AU 1054 4093954 YP_623210.1 CDS Bcen_3342 NC_008061.1 430773 432893 D PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_B0646 rhs element Vgr protein; Rhs element Vgr protein 430773..432893 Burkholderia cenocepacia AU 1054 4093955 YP_623211.1 CDS Bcen_3343 NC_008061.1 432922 433344 D KEGG: rso:RS05481 hypothetical protein; hypothetical protein 432922..433344 Burkholderia cenocepacia AU 1054 4093956 YP_623212.1 CDS Bcen_3344 NC_008061.1 433352 437836 D PFAM: YD repeat; KEGG: rso:RS05482 rhs-related transmembrane protein; hypothetical protein 433352..437836 Burkholderia cenocepacia AU 1054 4093957 YP_623213.1 CDS Bcen_3345 NC_008061.1 437845 438333 D KEGG: ppu:PP4094 hypothetical protein; hypothetical protein 437845..438333 Burkholderia cenocepacia AU 1054 4093958 YP_623214.1 CDS Bcen_3346 NC_008061.1 438812 439267 D KEGG: bur:Bcep18194_B3094 hypothetical protein; hypothetical protein 438812..439267 Burkholderia cenocepacia AU 1054 4093959 YP_623215.1 CDS Bcen_3347 NC_008061.1 439424 440077 R KEGG: bur:Bcep18194_B0650 hypothetical protein; hypothetical protein complement(439424..440077) Burkholderia cenocepacia AU 1054 4093960 YP_623216.1 CDS Bcen_3348 NC_008061.1 440863 441981 D PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B0651 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor 440863..441981 Burkholderia cenocepacia AU 1054 4093961 YP_623217.1 CDS Bcen_3349 NC_008061.1 442132 443091 D PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_B0652 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator 442132..443091 Burkholderia cenocepacia AU 1054 4093962 YP_623218.1 CDS livM NC_008061.1 443103 444374 D Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 443103..444374 Burkholderia cenocepacia AU 1054 4094040 YP_623219.1 CDS livG NC_008061.1 444371 445144 D Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 444371..445144 Burkholderia cenocepacia AU 1054 4094041 YP_623220.1 CDS Bcen_3352 NC_008061.1 445144 445845 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0655 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter 445144..445845 Burkholderia cenocepacia AU 1054 4094042 YP_623221.1 CDS Bcen_3353 NC_008061.1 445939 446790 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0656 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(445939..446790) Burkholderia cenocepacia AU 1054 4094043 YP_623222.1 CDS Bcen_3354 NC_008061.1 446923 447903 D KEGG: bur:Bcep18194_B0657 hypothetical protein; hypothetical protein 446923..447903 Burkholderia cenocepacia AU 1054 4094044 YP_623223.1 CDS Bcen_3355 NC_008061.1 447933 448919 D KEGG: bur:Bcep18194_B0658 hypothetical protein; hypothetical protein 447933..448919 Burkholderia cenocepacia AU 1054 4094045 YP_623224.1 CDS Bcen_3356 NC_008061.1 448933 449856 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_B0659 protein of unknown function DUF6, transmembrane; hypothetical protein 448933..449856 Burkholderia cenocepacia AU 1054 4094046 YP_623225.1 CDS Bcen_3357 NC_008061.1 449922 450272 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B0660 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 449922..450272 Burkholderia cenocepacia AU 1054 4094047 YP_623226.1 CDS Bcen_3358 NC_008061.1 450303 450710 R KEGG: rso:RS05501 hypothetical protein; hypothetical protein complement(450303..450710) Burkholderia cenocepacia AU 1054 4094048 YP_623227.1 CDS Bcen_3359 NC_008061.1 450755 451612 R PFAM: helix-turn-helix, AraC type; KEGG: pfo:Pfl_2388 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(450755..451612) Burkholderia cenocepacia AU 1054 4094049 YP_623228.1 CDS Bcen_3360 NC_008061.1 451686 452663 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0661 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(451686..452663) Burkholderia cenocepacia AU 1054 4094050 YP_623229.1 CDS Bcen_3361 NC_008061.1 452705 453454 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B0662 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 452705..453454 Burkholderia cenocepacia AU 1054 4094051 YP_623230.1 CDS Bcen_3362 NC_008061.1 453528 454829 R PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B0665 aminotransferase class-III; class III aminotransferase complement(453528..454829) Burkholderia cenocepacia AU 1054 4094052 YP_623231.1 CDS Bcen_3363 NC_008061.1 454908 455792 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0666 transcriptional regulator, LysR family; LysR family transcriptional regulator 454908..455792 Burkholderia cenocepacia AU 1054 4094053 YP_623232.1 CDS Bcen_3364 NC_008061.1 455806 457236 R involved in the conversion of chorismate to salicylate; salicylate biosynthesis isochorismate synthase complement(455806..457236) Burkholderia cenocepacia AU 1054 4094054 YP_623233.1 CDS Bcen_3365 NC_008061.1 457233 457538 R catalyzes the second reaction in the pyochelin biosynthetic pathway, the conversion of isochorismate to salicylate and pyruvate.; isochorismate-pyruvate lyase complement(457233..457538) Burkholderia cenocepacia AU 1054 4094055 YP_623234.1 CDS Bcen_3366 NC_008061.1 457535 458308 R PFAM: Thioesterase; KEGG: bur:Bcep18194_B0669 thioesterase; thioesterase complement(457535..458308) Burkholderia cenocepacia AU 1054 4094056 YP_623235.1 CDS Bcen_3367 NC_008061.1 458305 459957 R PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_B0670 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(458305..459957) Burkholderia cenocepacia AU 1054 4094057 YP_623236.1 CDS Bcen_3368 NC_008061.1 460175 461116 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0671 transcriptional regulator, AraC family; AraC family transcriptional regulator 460175..461116 Burkholderia cenocepacia AU 1054 4094058 YP_623237.1 CDS Bcen_3369 NC_008061.1 461240 465613 D TIGRFAM: Amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_B0672 non-ribosomal peptide synthetase modules; amino acid adenylation 461240..465613 Burkholderia cenocepacia AU 1054 4094059 YP_623238.1 CDS Bcen_3370 NC_008061.1 465610 471087 D TIGRFAM: Amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_B0673 non-ribosomal peptide synthetase modules; amino acid adenylation 465610..471087 Burkholderia cenocepacia AU 1054 4094060 YP_623239.1 CDS Bcen_3371 NC_008061.1 471084 472136 D TIGRFAM: Thiazolinyl imide reductase; PFAM: oxidoreductase-like; KEGG: bur:Bcep18194_B0674 thiazolinyl imide reductase; thiazolinyl imide reductase 471084..472136 Burkholderia cenocepacia AU 1054 4094061 YP_623240.1 CDS Bcen_3372 NC_008061.1 472133 473857 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0675 ABC efflux pump, fused inner membrane and ATPase subunits; ABC transporter related 472133..473857 Burkholderia cenocepacia AU 1054 4094062 YP_623241.1 CDS Bcen_3373 NC_008061.1 473854 475620 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0676 ABC efflux pump, fused inner membrane and ATPase subunits; ABC transporter 473854..475620 Burkholderia cenocepacia AU 1054 4094063 YP_623242.1 CDS Bcen_3374 NC_008061.1 475734 477950 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; KEGG: bur:Bcep18194_B0677 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 475734..477950 Burkholderia cenocepacia AU 1054 4094064 YP_623243.1 CDS Bcen_3375 NC_008061.1 477950 478213 D KEGG: bur:Bcep18194_B0678 hypothetical protein; hypothetical protein 477950..478213 Burkholderia cenocepacia AU 1054 4094065 YP_623244.1 CDS Bcen_3376 NC_008061.1 478215 479726 D PFAM: PepSY-associated TM helix; KEGG: bur:Bcep18194_B0679 hypothetical protein; PepSY-associated TM helix family protein 478215..479726 Burkholderia cenocepacia AU 1054 4094066 YP_623245.1 CDS Bcen_3377 NC_008061.1 479749 480996 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0680 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 479749..480996 Burkholderia cenocepacia AU 1054 4094067 YP_623246.1 CDS Bcen_3378 NC_008061.1 481073 482398 R PFAM: major facilitator superfamily MFS_1; KEGG: xcb:XC_0313 MFS transporter; major facilitator transporter complement(481073..482398) Burkholderia cenocepacia AU 1054 4094068 YP_623247.1 CDS Bcen_3379 NC_008061.1 482454 483326 D PFAM: regulatory protein, LysR; KEGG: bmb:BruAb2_0777 transcriptional regulator, LysR family; LysR family transcriptional regulator 482454..483326 Burkholderia cenocepacia AU 1054 4094069 YP_623248.1 CDS Bcen_3380 NC_008061.1 483629 484942 D PFAM: protein kinase; SMART: Tyrosine protein kinase; KEGG: bur:Bcep18194_B0691 serine/threonine protein kinase; serine/threonine protein kinase 483629..484942 Burkholderia cenocepacia AU 1054 4094071 YP_623249.1 CDS Bcen_3381 NC_008061.1 484958 485587 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B0692 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA complement(484958..485587) Burkholderia cenocepacia AU 1054 4094072 YP_623250.1 CDS Bcen_3382 NC_008061.1 485681 485854 R hypothetical protein complement(485681..485854) Burkholderia cenocepacia AU 1054 4094073 YP_623251.1 CDS Bcen_3383 NC_008061.1 485884 486330 R PFAM: protein of unknown function DUF461; KEGG: bur:Bcep18194_B0693 protein of unknown function DUF461; hypothetical protein complement(485884..486330) Burkholderia cenocepacia AU 1054 4094074 YP_623252.1 CDS Bcen_3384 NC_008061.1 486420 486785 R PFAM: copper resistance protein CopC; KEGG: bur:Bcep18194_B0694 copper resistance protein CopC; copper resistance protein CopC complement(486420..486785) Burkholderia cenocepacia AU 1054 4094075 YP_623253.1 CDS Bcen_3385 NC_008061.1 487078 487455 R KEGG: bur:Bcep18194_B0695 hypothetical protein; hypothetical protein complement(487078..487455) Burkholderia cenocepacia AU 1054 4094076 YP_623254.1 CDS Bcen_3386 NC_008061.1 487548 488042 R KEGG: bur:Bcep18194_B0696 hypothetical protein; hypothetical protein complement(487548..488042) Burkholderia cenocepacia AU 1054 4094077 YP_623255.1 CDS Bcen_3387 NC_008061.1 488101 488403 R PFAM: ferredoxin; KEGG: bur:Bcep18194_B0697 ferredoxin; ferredoxin complement(488101..488403) Burkholderia cenocepacia AU 1054 4094156 YP_623256.1 CDS Bcen_3388 NC_008061.1 488486 490399 R PFAM: sigma-54 factor, interaction region; SMART: ATPase; KEGG: bur:Bcep18194_B0698 sigma54 specific transcriptional regulator with GAF sensor, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator complement(488486..490399) Burkholderia cenocepacia AU 1054 4094157 YP_623257.1 CDS Bcen_3389 NC_008061.1 490668 490859 D KEGG: bur:Bcep18194_B0699 hypothetical protein; hypothetical protein 490668..490859 Burkholderia cenocepacia AU 1054 4094158 YP_623258.1 CDS Bcen_3390 NC_008061.1 491099 491386 D KEGG: bur:Bcep18194_B0700 hypothetical protein; hypothetical protein 491099..491386 Burkholderia cenocepacia AU 1054 4094159 YP_623259.1 CDS Bcen_3391 NC_008061.1 491617 493575 D PFAM: TPR repeat; SMART: Tetratricopeptide region; KEGG: bur:Bcep18194_B0701 TPR repeat protein; tetratricopeptide TPR_2 491617..493575 Burkholderia cenocepacia AU 1054 4094160 YP_623260.1 CDS Bcen_3392 NC_008061.1 493663 494964 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_B0702 xanthine/uracil/vitamin C transporter; xanthine/uracil/vitamin C permease complement(493663..494964) Burkholderia cenocepacia AU 1054 4094161 YP_623261.1 CDS Bcen_3393 NC_008061.1 495123 495530 D hypothetical protein 495123..495530 Burkholderia cenocepacia AU 1054 4094162 YP_623262.1 CDS Bcen_3394 NC_008061.1 495741 496019 D KEGG: bur:Bcep18194_B0704 hypothetical protein; hypothetical protein 495741..496019 Burkholderia cenocepacia AU 1054 4094163 YP_623263.1 CDS Bcen_3395 NC_008061.1 496191 496565 R KEGG: bur:Bcep18194_B0705 hypothetical protein; hypothetical protein complement(496191..496565) Burkholderia cenocepacia AU 1054 4094164 YP_623264.1 CDS Bcen_3396 NC_008061.1 496816 497103 R KEGG: bur:Bcep18194_B0707 hypothetical protein; hypothetical protein complement(496816..497103) Burkholderia cenocepacia AU 1054 4094165 YP_623265.1 CDS Bcen_3397 NC_008061.1 497183 498121 R KEGG: bur:Bcep18194_B0708 metal-dependent hydrolase; metal-dependent hydrolase complement(497183..498121) Burkholderia cenocepacia AU 1054 4094166 YP_623266.1 CDS Bcen_3398 NC_008061.1 498118 499905 R PFAM: alpha/beta hydrolase fold; KEGG: oxidoreductase; short chain dehydrogenase complement(498118..499905) Burkholderia cenocepacia AU 1054 4094167 YP_623267.1 CDS Bcen_3399 NC_008061.1 499947 500846 R KEGG: bur:Bcep18194_B0710 hypothetical protein; hypothetical protein complement(499947..500846) Burkholderia cenocepacia AU 1054 4094168 YP_623268.1 CDS Bcen_3400 NC_008061.1 501052 502635 D TIGRFAM: Twin-arginine translocation pathway signal; KEGG: bte:BTH_I0700 Tat (twin-arginine translocation) pathway signal sequence domain protein; twin-arginine translocation pathway signal 501052..502635 Burkholderia cenocepacia AU 1054 4094169 YP_623269.1 CDS Bcen_3401 NC_008061.1 502728 503501 R PFAM: band 7 protein; KEGG: bur:Bcep18194_B0711 membrane protease; hypothetical protein complement(502728..503501) Burkholderia cenocepacia AU 1054 4094170 YP_623270.1 CDS Bcen_3402 NC_008061.1 503498 505057 R PFAM: protein of unknown function DUF107; KEGG: bur:Bcep18194_B0712 membrane-bound serine protease; hypothetical protein complement(503498..505057) Burkholderia cenocepacia AU 1054 4094171 YP_623271.1 CDS Bcen_3403 NC_008061.1 505181 506215 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0713 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(505181..506215) Burkholderia cenocepacia AU 1054 4094172 YP_623272.1 CDS Bcen_3404 NC_008061.1 506353 507486 D PFAM: acyl-CoA dehydrogenase-like; KEGG: bur:Bcep18194_B0714 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 506353..507486 Burkholderia cenocepacia AU 1054 4094173 YP_623273.1 CDS Bcen_3405 NC_008061.1 507685 509391 D PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_B0715 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 507685..509391 Burkholderia cenocepacia AU 1054 4094174 YP_623274.1 CDS Bcen_3406 NC_008061.1 509388 511037 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B0716 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 509388..511037 Burkholderia cenocepacia AU 1054 4094175 YP_623275.1 CDS Bcen_3407 NC_008061.1 511056 511955 D KEGG: bur:Bcep18194_B0717 3-hydroxyisobutyrate dehydrogenase TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 511056..511955 Burkholderia cenocepacia AU 1054 4094176 YP_623276.1 CDS Bcen_3408 NC_008061.1 511955 512746 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 511955..512746 Burkholderia cenocepacia AU 1054 4094177 YP_623277.1 CDS Bcen_3409 NC_008061.1 512743 513882 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bur:Bcep18194_B0719 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 512743..513882 Burkholderia cenocepacia AU 1054 4094178 YP_623278.1 CDS Bcen_3410 NC_008061.1 513969 514922 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0721 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(513969..514922) Burkholderia cenocepacia AU 1054 4094179 YP_623279.1 CDS Bcen_3411 NC_008061.1 515060 516598 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0722 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 515060..516598 Burkholderia cenocepacia AU 1054 4094180 YP_623280.1 CDS Bcen_3412 NC_008061.1 516643 518022 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B0723 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT complement(516643..518022) Burkholderia cenocepacia AU 1054 4094181 YP_623281.1 CDS Bcen_3413 NC_008061.1 518029 519150 R PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_B0724 hypothetical protein; hypothetical protein complement(518029..519150) Burkholderia cenocepacia AU 1054 4094182 YP_623282.1 CDS Bcen_3414 NC_008061.1 519153 520073 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0724 hypothetical protein; ABC transporter complement(519153..520073) Burkholderia cenocepacia AU 1054 4094183 YP_623283.1 CDS Bcen_3415 NC_008061.1 520076 521269 R PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_B0725 secretion protein, HlyD family; secretion protein HlyD complement(520076..521269) Burkholderia cenocepacia AU 1054 4094184 YP_623284.1 CDS Bcen_3416 NC_008061.1 521678 522259 R KEGG: bur:Bcep18194_B0727 metal-dependent phosphohydrolase; metal-dependent phosphohydrolase complement(521678..522259) Burkholderia cenocepacia AU 1054 4094185 YP_623285.1 CDS Bcen_3417 NC_008061.1 522338 522904 R KEGG: bur:Bcep18194_B0729 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(522338..522904) Burkholderia cenocepacia AU 1054 4094186 YP_623286.1 CDS Bcen_3418 NC_008061.1 523353 524756 D KEGG: bur:Bcep18194_B0731 hypothetical protein; hypothetical protein 523353..524756 Burkholderia cenocepacia AU 1054 4094187 YP_623287.1 CDS Bcen_3419 NC_008061.1 524808 525434 D KEGG: bur:Bcep18194_B0732 hypothetical protein; hypothetical protein 524808..525434 Burkholderia cenocepacia AU 1054 4094188 YP_623288.1 CDS Bcen_3420 NC_008061.1 525562 526293 D PFAM: ribonuclease T2; KEGG: bur:Bcep18194_B0733 ribonuclease T2; ribonuclease T2 525562..526293 Burkholderia cenocepacia AU 1054 4094189 YP_623289.1 CDS Bcen_3421 NC_008061.1 526319 526972 R PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_B0745 isochorismatase hydrolase; isochorismatase hydrolase complement(526319..526972) Burkholderia cenocepacia AU 1054 4094190 YP_623290.1 CDS Bcen_3422 NC_008061.1 527218 527838 D hypothetical protein 527218..527838 Burkholderia cenocepacia AU 1054 4094191 YP_623291.1 CDS Bcen_3423 NC_008061.1 527957 528673 D PFAM: Thioesterase; KEGG: bur:Bcep18194_B0513 alpha/beta hydrolase; thioesterase 527957..528673 Burkholderia cenocepacia AU 1054 4094192 YP_623292.1 CDS Bcen_3424 NC_008061.1 528800 529243 D hypothetical protein 528800..529243 Burkholderia cenocepacia AU 1054 4094193 YP_623293.1 CDS Bcen_3425 NC_008061.1 529285 529767 D PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_B0904 hypothetical protein; cupin 529285..529767 Burkholderia cenocepacia AU 1054 4094194 YP_623294.1 CDS Bcen_3426 NC_008061.1 529905 530279 R KEGG: bur:Bcep18194_B0749 hypothetical protein; hypothetical protein complement(529905..530279) Burkholderia cenocepacia AU 1054 4094273 YP_623295.1 CDS Bcen_3427 NC_008061.1 530809 531714 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mbo:Mb2286 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 530809..531714 Burkholderia cenocepacia AU 1054 4094274 YP_623296.1 CDS Bcen_3428 NC_008061.1 531948 532862 R catalyzes the formation of glutamate from glutamine; glutaminase complement(531948..532862) Burkholderia cenocepacia AU 1054 4094275 YP_623297.1 CDS Bcen_3429 NC_008061.1 533082 533792 D PFAM: response regulator receiver; KEGG: bur:Bcep18194_B0752 two component transcriptional regulator, winged helix family; two component transcriptional regulator 533082..533792 Burkholderia cenocepacia AU 1054 4094276 YP_623298.1 CDS Bcen_3430 NC_008061.1 533857 534987 D PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_B0753 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase 533857..534987 Burkholderia cenocepacia AU 1054 4094277 YP_623299.1 CDS Bcen_3431 NC_008061.1 535087 537498 R PFAM: Patatin; KEGG: bur:Bcep18194_B0755 patatin; patatin complement(535087..537498) Burkholderia cenocepacia AU 1054 4094278 YP_623300.1 CDS Bcen_3432 NC_008061.1 537770 538804 D TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: bur:Bcep18194_B0756 cell shape determining protein MreB/Mrl; rod shape-determining protein MreB 537770..538804 Burkholderia cenocepacia AU 1054 4094279 YP_623301.1 CDS Bcen_3433 NC_008061.1 538972 539664 D PFAM: protein of unknown function DUF218; KEGG: bur:Bcep18194_B0757 protein of unknown function DUF218; hypothetical protein 538972..539664 Burkholderia cenocepacia AU 1054 4094280 YP_623302.1 CDS Bcen_3435 NC_008061.1 547637 549859 D PFAM: Amylo-alpha-1,6-glucosidase; KEGG: bur:Bcep18194_B0759 amylo-alpha-1,6-glucosidase; amylo-alpha-1,6-glucosidase 547637..549859 Burkholderia cenocepacia AU 1054 4094282 YP_623303.1 CDS Bcen_3436 NC_008061.1 549956 550207 D KEGG: bur:Bcep18194_B0760 hypothetical protein; hypothetical protein 549956..550207 Burkholderia cenocepacia AU 1054 4094283 YP_623304.1 CDS Bcen_3437 NC_008061.1 550690 551580 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0761 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(550690..551580) Burkholderia cenocepacia AU 1054 4094284 YP_623305.1 CDS Bcen_3438 NC_008061.1 551717 552655 D PFAM: penicillin-binding protein, transpeptidase; KEGG: bur:Bcep18194_B0762 beta-lactamase; Beta-lactamase 551717..552655 Burkholderia cenocepacia AU 1054 4094285 YP_623306.1 CDS Bcen_3439 NC_008061.1 553138 553338 R KEGG: bur:Bcep18194_B0763 hypothetical protein; hypothetical protein complement(553138..553338) Burkholderia cenocepacia AU 1054 4094286 YP_623307.1 CDS Bcen_3440 NC_008061.1 553917 554285 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bur:Bcep18194_B0764 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(553917..554285) Burkholderia cenocepacia AU 1054 4094287 YP_623308.1 CDS Bcen_3441 NC_008061.1 554321 554890 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B0765 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(554321..554890) Burkholderia cenocepacia AU 1054 4094288 YP_623309.1 CDS Bcen_3442 NC_008061.1 555091 556458 R PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_B0767 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase complement(555091..556458) Burkholderia cenocepacia AU 1054 4094289 YP_623310.1 CDS Bcen_3443 NC_008061.1 556464 557126 R PFAM: response regulator receiver; KEGG: bur:Bcep18194_B0768 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(556464..557126) Burkholderia cenocepacia AU 1054 4094290 YP_623311.1 CDS Bcen_3444 NC_008061.1 557361 557714 D PFAM: conserved hypothetical protein 156; KEGG: bur:Bcep18194_B0769 hypothetical protein; hypothetical protein 557361..557714 Burkholderia cenocepacia AU 1054 4094291 YP_623312.1 CDS Bcen_3445 NC_008061.1 557770 558630 D PFAM: helix-turn-helix protein RpiR; KEGG: bur:Bcep18194_B0770 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 557770..558630 Burkholderia cenocepacia AU 1054 4096214 YP_623313.1 CDS Bcen_3446 NC_008061.1 558688 559113 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0771 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 558688..559113 Burkholderia cenocepacia AU 1054 4096215 YP_623314.1 CDS Bcen_3447 NC_008061.1 559297 560964 D KEGG: bur:Bcep18194_B0772 hypothetical protein; hypothetical protein 559297..560964 Burkholderia cenocepacia AU 1054 4096216 YP_623315.1 CDS Bcen_3448 NC_008061.1 561110 561970 D KEGG: bur:Bcep18194_B0773 PEP phosphonomutase; PEP phosphonomutase 561110..561970 Burkholderia cenocepacia AU 1054 4096217 YP_623316.1 CDS Bcen_3449 NC_008061.1 562315 562581 D KEGG: bur:Bcep18194_B0774 hypothetical protein; hypothetical protein 562315..562581 Burkholderia cenocepacia AU 1054 4096218 YP_623317.1 CDS Bcen_3450 NC_008061.1 562683 563852 D KEGG: bur:Bcep18194_B0775 cytochrome P450-like; cytochrome P450-like protein 562683..563852 Burkholderia cenocepacia AU 1054 4096219 YP_623318.1 CDS Bcen_3451 NC_008061.1 563868 564194 R KEGG: bur:Bcep18194_B0776 hypothetical protein; hypothetical protein complement(563868..564194) Burkholderia cenocepacia AU 1054 4096220 YP_623319.1 CDS Bcen_3452 NC_008061.1 564285 564704 R PFAM: Rhodanese-like; KEGG: bur:Bcep18194_B0777 rhodanese-like protein; rhodanese-like protein complement(564285..564704) Burkholderia cenocepacia AU 1054 4096221 YP_623320.1 CDS ftrA NC_008061.1 564819 565781 D upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism; transcriptional activator FtrA 564819..565781 Burkholderia cenocepacia AU 1054 4096222 YP_623321.1 CDS Bcen_3454 NC_008061.1 565868 566938 D PFAM: 2-nitropropane dioxygenase, NPD; KEGG: bur:Bcep18194_B0781 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 565868..566938 Burkholderia cenocepacia AU 1054 4096223 YP_623322.1 CDS Bcen_3455 NC_008061.1 567016 568470 D PFAM: peptidase M20; KEGG: bur:Bcep18194_B0782 peptidase M20; peptidase M20 567016..568470 Burkholderia cenocepacia AU 1054 4096224 YP_623323.1 CDS Bcen_3456 NC_008061.1 568531 569640 D PFAM: Malate/L-lactate dehydrogenase; KEGG: bur:Bcep18194_B0783 malate/L-lactate dehydrogenase; hypothetical protein 568531..569640 Burkholderia cenocepacia AU 1054 4096225 YP_623324.1 CDS Bcen_3457 NC_008061.1 569637 570296 D PFAM: TfoX-like; KEGG: bur:Bcep18194_B0784 TfoX-like protein; TfoX-like protein 569637..570296 Burkholderia cenocepacia AU 1054 4096226 YP_623325.1 CDS Bcen_3458 NC_008061.1 570599 571177 D PFAM: NnrU; KEGG: bur:Bcep18194_B0785 membrane protein, NnrU-like; protein NnrU 570599..571177 Burkholderia cenocepacia AU 1054 4096227 YP_623326.1 CDS Bcen_3459 NC_008061.1 571211 572590 R PFAM: Spore germination protein; KEGG: bur:Bcep18194_B0786 amino acid tranporter; amino acid permease-associated region complement(571211..572590) Burkholderia cenocepacia AU 1054 4096228 YP_623327.1 CDS Bcen_3460 NC_008061.1 572880 573617 R PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_B0791 protein of unknown function DUF81; hypothetical protein complement(572880..573617) Burkholderia cenocepacia AU 1054 4096229 YP_623328.1 CDS Bcen_3461 NC_008061.1 573738 574322 R PFAM: protein of unknown function DUF1130; KEGG: bur:Bcep18194_B0793 protein of unknown function DUF1130; hypothetical protein complement(573738..574322) Burkholderia cenocepacia AU 1054 4096230 YP_623329.1 CDS Bcen_3462 NC_008061.1 574319 574552 R KEGG: bur:Bcep18194_B0794 hypothetical protein; hypothetical protein complement(574319..574552) Burkholderia cenocepacia AU 1054 4096231 YP_623330.1 CDS Bcen_3463 NC_008061.1 574839 576128 D PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B0802 FAD dependent oxidoreductase; FAD dependent oxidoreductase 574839..576128 Burkholderia cenocepacia AU 1054 4096232 YP_623331.1 CDS Bcen_3464 NC_008061.1 576151 576708 D PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_B0803 transcriptional regulator, XRE family; XRE family transcriptional regulator 576151..576708 Burkholderia cenocepacia AU 1054 4096233 YP_623332.1 CDS Bcen_3465 NC_008061.1 576866 578212 D PFAM: glutamine synthetase, catalytic region; KEGG: bur:Bcep18194_B0804 glutamine synthetase, catalytic region; glutamine synthetase 576866..578212 Burkholderia cenocepacia AU 1054 4095888 YP_623333.1 CDS Bcen_3466 NC_008061.1 578236 579414 R PFAM: monooxygenase, FAD-binding; KEGG: bur:Bcep18194_B0809 monooxygenase, FAD-binding; monooxygenase, FAD-binding complement(578236..579414) Burkholderia cenocepacia AU 1054 4095889 YP_623334.1 CDS Bcen_3467 NC_008061.1 579559 580494 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0810 transcriptional regulator, LysR family; LysR family transcriptional regulator 579559..580494 Burkholderia cenocepacia AU 1054 4095890 YP_623335.1 CDS Bcen_3468 NC_008061.1 580474 581067 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0811 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(580474..581067) Burkholderia cenocepacia AU 1054 4095891 YP_623336.1 CDS Bcen_3469 NC_008061.1 581064 581642 R KEGG: bur:Bcep18194_B0812 hypothetical protein; hypothetical protein complement(581064..581642) Burkholderia cenocepacia AU 1054 4095892 YP_623337.1 CDS Bcen_3470 NC_008061.1 581708 582097 R PFAM: protein of unknown function DUF1311; KEGG: bur:Bcep18194_B0813 protein of unknown function DUF1311; hypothetical protein complement(581708..582097) Burkholderia cenocepacia AU 1054 4095893 YP_623338.1 CDS Bcen_3471 NC_008061.1 582152 582913 R PFAM: cell wall hydrolase/autolysin; KEGG: bur:Bcep18194_B0814 cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(582152..582913) Burkholderia cenocepacia AU 1054 4095894 YP_623339.1 CDS Bcen_3472 NC_008061.1 583038 584657 R KEGG: bur:Bcep18194_B0815 hypothetical protein; hypothetical protein complement(583038..584657) Burkholderia cenocepacia AU 1054 4095895 YP_623340.1 CDS Bcen_3473 NC_008061.1 584657 586171 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(584657..586171) Burkholderia cenocepacia AU 1054 4095896 YP_623341.1 CDS Bcen_3474 NC_008061.1 586293 586679 D PFAM: protein of unknown function DUF350; KEGG: bur:Bcep18194_B0817 protein of unknown function DUF350; hypothetical protein 586293..586679 Burkholderia cenocepacia AU 1054 4095897 YP_623342.1 CDS Bcen_3475 NC_008061.1 586707 587747 D KEGG: bur:Bcep18194_B0818 virion core protein; virion core protein 586707..587747 Burkholderia cenocepacia AU 1054 4095898 YP_623343.1 CDS Bcen_3476 NC_008061.1 587757 589274 D KEGG: bur:Bcep18194_B0819 hypothetical protein; hypothetical protein 587757..589274 Burkholderia cenocepacia AU 1054 4095899 YP_623344.1 CDS Bcen_3477 NC_008061.1 589417 589800 D PFAM: S-adenosylmethionine decarboxylase related; KEGG: bur:Bcep18194_B0820 S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase-like protein 589417..589800 Burkholderia cenocepacia AU 1054 4095900 YP_623345.1 CDS Bcen_3478 NC_008061.1 589922 590374 R KEGG: bur:Bcep18194_B0824 hypothetical protein; hypothetical protein complement(589922..590374) Burkholderia cenocepacia AU 1054 4095901 YP_623346.1 CDS Bcen_3479 NC_008061.1 590566 591606 D NadM-Nudix subfamily; involved in creation of nicotanimide adenine dinucleotide NAD from either biosynthetic or salvage pathways; bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase 590566..591606 Burkholderia cenocepacia AU 1054 4095902 YP_623347.1 CDS Bcen_3480 NC_008061.1 591680 593113 D PFAM: Nicotinate phosphoribosyltransferase and related; KEGG: bur:Bcep18194_B0826 nicotinate phosphoribosyltransferase and related; nicotinate phosphoribosyltransferase 591680..593113 Burkholderia cenocepacia AU 1054 4095903 YP_623348.1 CDS Bcen_3481 NC_008061.1 593156 594631 R PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B0828 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator complement(593156..594631) Burkholderia cenocepacia AU 1054 4095904 YP_623349.1 CDS Bcen_3482 NC_008061.1 594756 595643 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_B0829 protein of unknown function DUF6, transmembrane; hypothetical protein 594756..595643 Burkholderia cenocepacia AU 1054 4095905 YP_623350.1 CDS Bcen_3483 NC_008061.1 595837 597075 R catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase complement(595837..597075) Burkholderia cenocepacia AU 1054 4095906 YP_623351.1 CDS Bcen_3484 NC_008061.1 597184 598098 D activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; DNA-binding transcriptional regulator LysR 597184..598098 Burkholderia cenocepacia AU 1054 4095829 YP_623352.1 CDS Bcen_3485 NC_008061.1 598111 598758 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0839 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 598111..598758 Burkholderia cenocepacia AU 1054 4095830 YP_623353.1 CDS Bcen_3486 NC_008061.1 598880 599458 R KEGG: bur:Bcep18194_B0840 hypothetical protein; hypothetical protein complement(598880..599458) Burkholderia cenocepacia AU 1054 4095831 YP_623354.1 CDS Bcen_3487 NC_008061.1 599865 600488 R PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_B0841 haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase complement(599865..600488) Burkholderia cenocepacia AU 1054 4095832 YP_623355.1 CDS Bcen_3488 NC_008061.1 600538 600804 R PFAM: Addiction module toxin, Txe/YoeB; KEGG: bur:Bcep18194_B0843 addiction module toxin, Txe/YoeB; addiction module toxin Txe/YoeB complement(600538..600804) Burkholderia cenocepacia AU 1054 4095833 YP_623356.1 CDS Bcen_3489 NC_008061.1 600801 601061 R TIGRFAM: Prevent-host-death protein; PFAM: protein of unknown function DUF172; KEGG: bur:Bcep18194_B0844 prevent-host-death protein; prevent-host-death protein complement(600801..601061) Burkholderia cenocepacia AU 1054 4095834 YP_623357.1 CDS Bcen_3490 NC_008061.1 601248 601727 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0845 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 601248..601727 Burkholderia cenocepacia AU 1054 4095835 YP_623358.1 CDS Bcen_3491 NC_008061.1 601785 602003 D PFAM: protein of unknown function DUF1653; KEGG: bur:Bcep18194_B0846 hypothetical protein; hypothetical protein 601785..602003 Burkholderia cenocepacia AU 1054 4095836 YP_623359.1 CDS Bcen_3492 NC_008061.1 602026 602484 R TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+-transporting two-sector ATPase, delta/epsilon subunit; KEGG: nmu:Nmul_A0311 ATP synthase F1, epsilon subunit; ATP synthase F1 subunit epsilon complement(602026..602484) Burkholderia cenocepacia AU 1054 4095837 YP_623360.1 CDS Bcen_3493 NC_008061.1 602495 603370 R KEGG: tbd:Tbd_2798 F-type H+-transporting ATP synthase, gamma subunit TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+-transporting two-sector ATPase, gamma subunit; ATP synthase F1 subunit gamma complement(602495..603370) Burkholderia cenocepacia AU 1054 4095838 YP_623361.1 CDS Bcen_3494 NC_008061.1 603517 604485 D catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs; phosphate acetyltransferase 603517..604485 Burkholderia cenocepacia AU 1054 4095839 YP_623362.1 CDS Bcen_3495 NC_008061.1 604496 605704 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: reu:Reut_A1203 acetate kinase; acetate kinase 604496..605704 Burkholderia cenocepacia AU 1054 4095840 YP_623363.1 CDS Bcen_3496 NC_008061.1 605712 606833 D PFAM: alpha/beta hydrolase fold; KEGG: bja:bll4548 hypothetical protein; PHB de-polymerase-like 605712..606833 Burkholderia cenocepacia AU 1054 4095841 YP_623364.1 CDS Bcen_3497 NC_008061.1 606862 607662 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 606862..607662 Burkholderia cenocepacia AU 1054 4095842 YP_623365.1 CDS Bcen_3498 NC_008061.1 607684 608895 R PFAM: protein of unknown function DUF1006; KEGG: bur:Bcep18194_B0847 protein of unknown function DUF1006; hypothetical protein complement(607684..608895) Burkholderia cenocepacia AU 1054 4095843 YP_623366.1 CDS Bcen_3499 NC_008061.1 609251 610666 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0848 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(609251..610666) Burkholderia cenocepacia AU 1054 4095844 YP_623367.1 CDS Bcen_3500 NC_008061.1 610691 610954 R hypothetical protein complement(610691..610954) Burkholderia cenocepacia AU 1054 4095845 YP_623368.1 CDS Bcen_3501 NC_008061.1 611066 611695 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B0850 transcriptional regulator, TetR family; TetR family transcriptional regulator 611066..611695 Burkholderia cenocepacia AU 1054 4095846 YP_623369.1 CDS Bcen_3502 NC_008061.1 611832 613550 D PFAM: glycoside hydrolase, family 37; KEGG: bur:Bcep18194_B0851 alpha,alpha-trehalase; Alpha,alpha-trehalase 611832..613550 Burkholderia cenocepacia AU 1054 4095847 YP_623370.1 CDS Bcen_3503 NC_008061.1 613675 615219 R PFAM: Carbohydrate-selective porin OprB; KEGG: bur:Bcep18194_B0852 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB complement(613675..615219) Burkholderia cenocepacia AU 1054 4095848 YP_623371.1 CDS Bcen_3504 NC_008061.1 615247 615513 R KEGG: bur:Bcep18194_B0853 hypothetical protein; hypothetical protein complement(615247..615513) Burkholderia cenocepacia AU 1054 4096311 YP_623372.1 CDS Bcen_3505 NC_008061.1 616184 616375 R KEGG: bur:Bcep18194_B0854 hypothetical protein; hypothetical protein complement(616184..616375) Burkholderia cenocepacia AU 1054 4096312 YP_623373.1 CDS Bcen_3506 NC_008061.1 616525 616764 R hypothetical protein complement(616525..616764) Burkholderia cenocepacia AU 1054 4096313 YP_623374.1 CDS Bcen_3507 NC_008061.1 616854 618500 D PFAM: natural resistance-associated macrophage protein; KEGG: bur:Bcep18194_B0855 Mn2+ and Fe2+ transporters of the NRAMP family; natural resistance-associated macrophage protein 616854..618500 Burkholderia cenocepacia AU 1054 4096314 YP_623375.1 CDS Bcen_3508 NC_008061.1 618637 619545 R PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B0856 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(618637..619545) Burkholderia cenocepacia AU 1054 4096315 YP_623376.1 CDS Bcen_3509 NC_008061.1 619829 620662 D PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B0857 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 619829..620662 Burkholderia cenocepacia AU 1054 4096316 YP_623377.1 CDS Bcen_3510 NC_008061.1 620913 623132 D PFAM: type III secretion FHIPEP; KEGG: rso:RSp0863 hrp conserved hrcV transmembrane protein; type III secretion FHIPEP 620913..623132 Burkholderia cenocepacia AU 1054 4096317 YP_623378.1 CDS Bcen_3511 NC_008061.1 623129 623407 D TIGRFAM: Type III secretion protein HrpO; PFAM: export protein FliQ, family 3; KEGG: pae:PA1692 probable translocation protein in type III secretion; Type III secretion protein HrpO 623129..623407 Burkholderia cenocepacia AU 1054 4096318 YP_623379.1 CDS Bcen_3512 NC_008061.1 623407 625452 D TIGRFAM: Type III secretion system outer membrane pore YscC/HrcC; PFAM: type II and III secretion system protein; KEGG: bma:BMAA1602 type II/III secretion system protein; Type III secretion system outer membrane pore YscC/HrcC 623407..625452 Burkholderia cenocepacia AU 1054 4096319 YP_623380.1 CDS Bcen_3513 NC_008061.1 625449 626792 D TIGRFAM: Type III secretion system YscD/HrpQ; PFAM: Forkhead-associated; Type III secretion system YscD/HrpQ 625449..626792 Burkholderia cenocepacia AU 1054 4096320 YP_623381.1 CDS Bcen_3514 NC_008061.1 626935 627147 D hypothetical protein 626935..627147 Burkholderia cenocepacia AU 1054 4096321 YP_623382.1 CDS Bcen_3515 NC_008061.1 627272 627748 D hypothetical protein 627272..627748 Burkholderia cenocepacia AU 1054 4096322 YP_623383.1 CDS Bcen_3516 NC_008061.1 627804 628682 D TIGRFAM: Type III secretion system lipoprotein HrcJ/YscJ; PFAM: secretory protein YscJ/FliF; KEGG: bte:BTH_II0747 lipoprotein transmembrane protein; Type III secretion system lipoprotein HrcJ/YscJ 627804..628682 Burkholderia cenocepacia AU 1054 4096323 YP_623384.1 CDS Bcen_3517 NC_008061.1 628679 629428 D KEGG: bbr:BB1626 conserved hypothetical protein; hypothetical protein 628679..629428 Burkholderia cenocepacia AU 1054 4096324 YP_623385.1 CDS Bcen_3518 NC_008061.1 629410 630039 D TIGRFAM: Type III secretion system HrpE/YscL; KEGG: bpe:BP2246 type III secretion protein; Type III secretion system HrpE/YscL 629410..630039 Burkholderia cenocepacia AU 1054 4096325 YP_623386.1 CDS Bcen_3519 NC_008061.1 630036 631412 D KEGG: xoo:XOO0091 HrcN TIGRFAM: ATP synthase FliI/YscN; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: ATPase; ATP synthase FliI/YscN 630036..631412 Burkholderia cenocepacia AU 1054 4096326 YP_623387.1 CDS Bcen_3520 NC_008061.1 631405 632085 D KEGG: tcr:506599.50 mucin-associated surface protein (MASP) PROSITE: ALA_RICH GLU_RICH; mucin-associated surface protein 631405..632085 Burkholderia cenocepacia AU 1054 4096327 YP_623388.1 CDS Bcen_3521 NC_008061.1 632079 632888 D TIGRFAM: Type III secretion protein SpaR/YscT; PFAM: type III secretion system inner membrane R protein; KEGG: rso:RSp0872 hrp conserved hrcT transmembrane protein; Type III secretion protein SpaR/YscT 632079..632888 Burkholderia cenocepacia AU 1054 4096328 YP_623389.1 CDS Bcen_3522 NC_008061.1 632905 633936 D PFAM: type III secretion exporter; KEGG: hch:HCH_05114 type III secretory pathway, component EscU; type III secretion exporter 632905..633936 Burkholderia cenocepacia AU 1054 4096329 YP_623390.1 CDS Bcen_3523 NC_008061.1 634207 636177 D KEGG: bur:Bcep18194_B0858 asparagine synthase, glutamine-hydrolyzing TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: glutamine amidotransferase, class-II; asparagine synthase; asparagine synthase 634207..636177 Burkholderia cenocepacia AU 1054 4095790 YP_623391.1 CDS Bcen_3524 NC_008061.1 636234 649763 R KEGG: spn:SP1772 cell wall surface anchor family protein; hypothetical protein complement(636234..649763) Burkholderia cenocepacia AU 1054 4095791 YP_623392.1 CDS Bcen_3525 NC_008061.1 650016 650804 R PFAM: Lytic transglycosylase, catalytic; KEGG: xcv:XCVc0028 type IV secretion system protein VirB1; lytic transglycosylase, catalytic complement(650016..650804) Burkholderia cenocepacia AU 1054 4095792 YP_623393.1 CDS Bcen_3526 NC_008061.1 650801 651475 R part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein complement(650801..651475) Burkholderia cenocepacia AU 1054 4095793 YP_623394.1 CDS Bcen_3527 NC_008061.1 651479 652633 R TIGRFAM: Type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bpe:BP2241 type III secretion protein; Type III secretion system apparatus protein YscQ/HrcQ complement(651479..652633) Burkholderia cenocepacia AU 1054 4095794 YP_623395.1 CDS Bcen_3528 NC_008061.1 653016 653414 R PFAM: transcriptional regulatory protein-like; KEGG: bur:Bcep18194_B0860 response regulator receiver domain protein (CheY-like); response regulator receiver protein complement(653016..653414) Burkholderia cenocepacia AU 1054 4095795 YP_623396.1 CDS Bcen_3529 NC_008061.1 653864 656074 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bur:Bcep18194_B0862 aldehyde oxidase; twin-arginine translocation pathway signal complement(653864..656074) Burkholderia cenocepacia AU 1054 4095796 YP_623397.1 CDS Bcen_3530 NC_008061.1 656077 656538 R PFAM: ferredoxin; KEGG: bur:Bcep18194_B0863 (2Fe-2S)-binding protein; (2Fe-2S)-binding protein complement(656077..656538) Burkholderia cenocepacia AU 1054 4095797 YP_623398.1 CDS Bcen_3531 NC_008061.1 656720 657643 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0864 transcriptional regulator, AraC family; AraC family transcriptional regulator 656720..657643 Burkholderia cenocepacia AU 1054 4095798 YP_623399.1 CDS Bcen_3532 NC_008061.1 657868 658251 R KEGG: bur:Bcep18194_B0869 hypothetical protein; hypothetical protein complement(657868..658251) Burkholderia cenocepacia AU 1054 4095799 YP_623400.1 CDS Bcen_3533 NC_008061.1 658890 659162 R hypothetical protein complement(658890..659162) Burkholderia cenocepacia AU 1054 4095800 YP_623401.1 CDS Bcen_3534 NC_008061.1 659228 659479 D KEGG: bur:Bcep18194_B0871 hypothetical protein; hypothetical protein 659228..659479 Burkholderia cenocepacia AU 1054 4095801 YP_623402.1 CDS Bcen_3535 NC_008061.1 659937 660260 D KEGG: bur:Bcep18194_B0872 hypothetical protein; hypothetical protein 659937..660260 Burkholderia cenocepacia AU 1054 4095802 YP_623403.1 CDS Bcen_3536 NC_008061.1 660372 660962 D KEGG: bur:Bcep18194_B0873 hypothetical protein; hypothetical protein 660372..660962 Burkholderia cenocepacia AU 1054 4095803 YP_623404.1 CDS Bcen_3537 NC_008061.1 661042 661323 D KEGG: bur:Bcep18194_B0874 hypothetical protein; hypothetical protein 661042..661323 Burkholderia cenocepacia AU 1054 4095804 YP_623405.1 CDS Bcen_3538 NC_008061.1 661368 663026 D KEGG: bur:Bcep18194_B0875 hypothetical protein; hypothetical protein 661368..663026 Burkholderia cenocepacia AU 1054 4095805 YP_623406.1 CDS Bcen_3539 NC_008061.1 663182 663766 D KEGG: bur:Bcep18194_B0876 hypothetical protein; hypothetical protein 663182..663766 Burkholderia cenocepacia AU 1054 4095806 YP_623407.1 CDS Bcen_3540 NC_008061.1 663902 665299 D PFAM: sigma-54 factor, interaction region; SMART: ATPase; KEGG: bur:Bcep18194_B0877 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 663902..665299 Burkholderia cenocepacia AU 1054 4095807 YP_623408.1 CDS Bcen_3541 NC_008061.1 665430 665936 D KEGG: bur:Bcep18194_B0878 hypothetical protein; hypothetical protein 665430..665936 Burkholderia cenocepacia AU 1054 4095808 YP_623409.1 CDS Bcen_3542 NC_008061.1 665962 666453 R KEGG: bur:Bcep18194_B0879 hypothetical protein; hypothetical protein complement(665962..666453) Burkholderia cenocepacia AU 1054 4095809 YP_623410.1 CDS Bcen_3543 NC_008061.1 666830 667507 D PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B0880 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 666830..667507 Burkholderia cenocepacia AU 1054 4095318 YP_623411.1 CDS Bcen_3544 NC_008061.1 667560 669185 R PFAM: histidine kinase, HAMP region; KEGG: bur:Bcep18194_B0881 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(667560..669185) Burkholderia cenocepacia AU 1054 4095319 YP_623412.1 CDS Bcen_3545 NC_008061.1 669362 670309 D KEGG: bur:Bcep18194_B0882 2-dehydropantoate 2-reductase TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE-like; 2-dehydropantoate 2-reductase 669362..670309 Burkholderia cenocepacia AU 1054 4095320 YP_623413.1 CDS Bcen_3546 NC_008061.1 670560 671519 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0883 transcriptional regulator, AraC family; AraC family transcriptional regulator 670560..671519 Burkholderia cenocepacia AU 1054 4095321 YP_623414.1 CDS Bcen_3547 NC_008061.1 671640 672587 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_B0884 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator 671640..672587 Burkholderia cenocepacia AU 1054 4095322 YP_623415.1 CDS Bcen_3548 NC_008061.1 672650 674170 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0885 ABC sugar transporter, ATPase subunit; ABC transporter 672650..674170 Burkholderia cenocepacia AU 1054 4095323 YP_623416.1 CDS Bcen_3549 NC_008061.1 674157 675170 D PFAM: inner-membrane translocator; KEGG: bur:Bcep18194_B0886 ABC sugar transporter, inner-membrane subunit; inner-membrane translocator 674157..675170 Burkholderia cenocepacia AU 1054 4095324 YP_623417.1 CDS Bcen_3550 NC_008061.1 675217 676305 D PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B0887 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase GroES-like protein 675217..676305 Burkholderia cenocepacia AU 1054 4095325 YP_623418.1 CDS Bcen_3551 NC_008061.1 676335 677882 D PFAM: carbohydrate kinase, FGGY; KEGG: bur:Bcep18194_B0888 xylulokinase; xylulokinase 676335..677882 Burkholderia cenocepacia AU 1054 4095326 YP_623419.1 CDS Bcen_3552 NC_008061.1 677912 678637 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B0889 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 677912..678637 Burkholderia cenocepacia AU 1054 4095327 YP_623420.1 CDS Bcen_3553 NC_008061.1 678689 678985 R hypothetical protein complement(678689..678985) Burkholderia cenocepacia AU 1054 4095328 YP_623421.1 CDS Bcen_3554 NC_008061.1 679003 679587 R KEGG: bur:Bcep18194_B0890 uncharacterized MobA-related protein; MobA-likeprotein complement(679003..679587) Burkholderia cenocepacia AU 1054 4095329 YP_623422.1 CDS Bcen_3555 NC_008061.1 679690 680382 R PFAM: peptidase M15D, vanX D-ala-D-ala dipeptidase; KEGG: bur:Bcep18194_B0891 peptidase M15D, VanX D-ala-D-ala dipeptidase; peptidase M15D, vanX D-ala-D-ala dipeptidase complement(679690..680382) Burkholderia cenocepacia AU 1054 4095330 YP_623423.1 CDS Bcen_3556 NC_008061.1 680630 680959 R KEGG: reu:Reut_B4270 hypothetical protein; hypothetical protein complement(680630..680959) Burkholderia cenocepacia AU 1054 4095331 YP_623424.1 CDS Bcen_3557 NC_008061.1 680952 681635 R PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: bur:Bcep18194_B0892 2OG-Fe(II) oxygenase; hydroxylase complement(680952..681635) Burkholderia cenocepacia AU 1054 4095332 YP_623425.1 CDS Bcen_3558 NC_008061.1 681632 682387 R PFAM: Sel1-like repeat; KEGG: bur:Bcep18194_B0893 TPR repeat protein; Sel1 repeat-containing protein complement(681632..682387) Burkholderia cenocepacia AU 1054 4095333 YP_623426.1 CDS Bcen_3559 NC_008061.1 682391 684634 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; KEGG: bur:Bcep18194_B0894 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(682391..684634) Burkholderia cenocepacia AU 1054 4095334 YP_623427.1 CDS Bcen_3560 NC_008061.1 685131 686426 R catalyzes the conversion of carbamoyl phosphate and aspartate to form N-carbamoyl aspartate; aspartate carbamoyltransferase complement(685131..686426) Burkholderia cenocepacia AU 1054 4095335 YP_623428.1 CDS Bcen_3561 NC_008061.1 686661 686795 D PFAM: Entericidin EcnAB; KEGG: bur:Bcep18194_B0898 Entericidin EcnAB; entericidin EcnAB 686661..686795 Burkholderia cenocepacia AU 1054 4095336 YP_623429.1 CDS Bcen_3562 NC_008061.1 686890 687438 R KEGG: bur:Bcep18194_B0899 hypothetical protein; hypothetical protein complement(686890..687438) Burkholderia cenocepacia AU 1054 4094675 YP_623430.1 CDS Bcen_3563 NC_008061.1 687641 688636 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_B0900 protein of unknown function DUF6, transmembrane; hypothetical protein complement(687641..688636) Burkholderia cenocepacia AU 1054 4094676 YP_623431.1 CDS Bcen_3564 NC_008061.1 688755 689549 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0901 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(688755..689549) Burkholderia cenocepacia AU 1054 4094677 YP_623432.1 CDS Bcen_3565 NC_008061.1 689720 690553 D KEGG: bur:Bcep18194_B0902 hypothetical protein; hypothetical protein 689720..690553 Burkholderia cenocepacia AU 1054 4094678 YP_623433.1 CDS Bcen_3566 NC_008061.1 690550 691359 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 690550..691359 Burkholderia cenocepacia AU 1054 4094679 YP_623434.1 CDS Bcen_3567 NC_008061.1 691452 692129 R KEGG: bur:Bcep18194_B0905 hypothetical protein; hypothetical protein complement(691452..692129) Burkholderia cenocepacia AU 1054 4094680 YP_623435.1 CDS Bcen_3568 NC_008061.1 692530 693243 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B0911 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 692530..693243 Burkholderia cenocepacia AU 1054 4094681 YP_623436.2 CDS Bcen_3569 NC_008061.1 693333 694046 D response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; DNA-binding response regulator CreB 693333..694046 Burkholderia cenocepacia AU 1054 4094682 YP_623437.1 CDS Bcen_3570 NC_008061.1 694062 695513 D part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC 694062..695513 Burkholderia cenocepacia AU 1054 4094683 YP_623438.1 CDS Bcen_3571 NC_008061.1 695617 697005 D PFAM: Inner membrane CreD; KEGG: bur:Bcep18194_B0914 inner membrane protein CreD; hypothetical protein 695617..697005 Burkholderia cenocepacia AU 1054 4094684 YP_623439.1 CDS Bcen_3572 NC_008061.1 697189 697611 R PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_B0915 endoribonuclease L-PSP; endoribonuclease L-PSP complement(697189..697611) Burkholderia cenocepacia AU 1054 4094685 YP_623440.1 CDS Bcen_3573 NC_008061.1 697682 697969 D KEGG: bur:Bcep18194_B0917 hypothetical protein; hypothetical protein 697682..697969 Burkholderia cenocepacia AU 1054 4094686 YP_623441.1 CDS Bcen_3574 NC_008061.1 698063 699607 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0918 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(698063..699607) Burkholderia cenocepacia AU 1054 4094687 YP_623442.1 CDS Bcen_3575 NC_008061.1 699671 700543 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0919 transcriptional regulator, LysR family; LysR family transcriptional regulator 699671..700543 Burkholderia cenocepacia AU 1054 4094688 YP_623443.1 CDS Bcen_3576 NC_008061.1 700588 700908 D KEGG: bur:Bcep18194_B0920 hypothetical protein; hypothetical protein 700588..700908 Burkholderia cenocepacia AU 1054 4094689 YP_623444.1 CDS Bcen_3578 NC_008061.1 701940 702917 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B0922 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 701940..702917 Burkholderia cenocepacia AU 1054 4094691 YP_623445.1 CDS Bcen_3579 NC_008061.1 703269 703970 R KEGG: bur:Bcep18194_B0924 hypothetical protein; hypothetical protein complement(703269..703970) Burkholderia cenocepacia AU 1054 4094692 YP_623446.1 CDS Bcen_3580 NC_008061.1 704020 705327 R PFAM: General substrate transporter; KEGG: bur:Bcep18194_B0925 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(704020..705327) Burkholderia cenocepacia AU 1054 4094693 YP_623447.1 CDS Bcen_3581 NC_008061.1 705391 706092 R KEGG: bur:Bcep18194_B0926 hypothetical protein; hypothetical protein complement(705391..706092) Burkholderia cenocepacia AU 1054 4094694 YP_623448.1 CDS Bcen_3582 NC_008061.1 706192 707220 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0927 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(706192..707220) Burkholderia cenocepacia AU 1054 4095453 YP_623449.1 CDS Bcen_3583 NC_008061.1 707395 708186 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B0928 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(707395..708186) Burkholderia cenocepacia AU 1054 4095454 YP_623450.1 CDS Bcen_3584 NC_008061.1 708650 709528 D PFAM: protein of unknown function, zinc metallopeptidase ; KEGG: bur:Bcep18194_B0929 protein of unknown function, zinc binding 2; hypothetical protein 708650..709528 Burkholderia cenocepacia AU 1054 4095455 YP_623451.1 CDS Bcen_3585 NC_008061.1 709665 710420 D PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B0930 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 709665..710420 Burkholderia cenocepacia AU 1054 4095456 YP_623452.1 CDS Bcen_3586 NC_008061.1 710641 712143 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B0933 betaine-aldehyde dehydrogenase; betaine-aldehyde dehydrogenase 710641..712143 Burkholderia cenocepacia AU 1054 4095457 YP_623453.1 CDS Bcen_3587 NC_008061.1 712196 713536 D PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B0934 aminotransferase class-III; hypothetical protein 712196..713536 Burkholderia cenocepacia AU 1054 4095458 YP_623454.1 CDS Bcen_3588 NC_008061.1 713776 715260 D PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0935 amino acid transporter; amino acid permease 713776..715260 Burkholderia cenocepacia AU 1054 4095459 YP_623455.1 CDS Bcen_3589 NC_008061.1 715257 715868 D KEGG: bur:Bcep18194_B0936 hypothetical protein; hypothetical protein 715257..715868 Burkholderia cenocepacia AU 1054 4095460 YP_623456.1 CDS Bcen_3590 NC_008061.1 715878 716876 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0937 transcriptional regulator, AraC family; AraC family transcriptional regulator 715878..716876 Burkholderia cenocepacia AU 1054 4095461 YP_623457.1 CDS Bcen_3591 NC_008061.1 717044 718252 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B0938 outer membrane protein (porin); porin 717044..718252 Burkholderia cenocepacia AU 1054 4095462 YP_623458.1 CDS Bcen_3592 NC_008061.1 718472 719791 D PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_B0939 ABC sugar transporter, periplasmic ligand binding protein; extracellular solute-binding protein 718472..719791 Burkholderia cenocepacia AU 1054 4095463 YP_623459.1 CDS Bcen_3593 NC_008061.1 719826 720695 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0940 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 719826..720695 Burkholderia cenocepacia AU 1054 4095464 YP_623460.1 CDS Bcen_3594 NC_008061.1 720692 721552 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0941 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 720692..721552 Burkholderia cenocepacia AU 1054 4095465 YP_623461.1 CDS Bcen_3595 NC_008061.1 721585 722607 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: bur:Bcep18194_B0942 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(721585..722607) Burkholderia cenocepacia AU 1054 4095466 YP_623462.1 CDS Bcen_3596 NC_008061.1 722614 723534 D SMART: Phosphatidylinositol-specific phospholipase C, X region; KEGG: bur:Bcep18194_B0943 phosphatidylinositol-specific phospholipase C, X region; phosphatidylinositol-specific phospholipase C, X region 722614..723534 Burkholderia cenocepacia AU 1054 4095467 YP_623463.1 CDS Bcen_3597 NC_008061.1 723535 724491 R KEGG: bur:Bcep18194_B0944 dienelactone hydrolase-like; dienelactone hydrolase-like complement(723535..724491) Burkholderia cenocepacia AU 1054 4095468 YP_623464.1 CDS Bcen_3598 NC_008061.1 724611 725138 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0946 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 724611..725138 Burkholderia cenocepacia AU 1054 4095469 YP_623465.1 CDS Bcen_3599 NC_008061.1 725167 726081 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0947 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(725167..726081) Burkholderia cenocepacia AU 1054 4095470 YP_623466.1 CDS Bcen_3600 NC_008061.1 726200 727387 D KEGG: bur:Bcep18194_B0948 peptidase M20D, amidohydrolase TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation; peptidase M20D, amidohydrolase 726200..727387 Burkholderia cenocepacia AU 1054 4095471 YP_623467.1 CDS Bcen_3601 NC_008061.1 727447 728619 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B0949 outer membrane protein (porin)-like; porin 727447..728619 Burkholderia cenocepacia AU 1054 4095472 YP_623468.1 CDS Bcen_3602 NC_008061.1 728633 729913 D PFAM: General substrate transporter; KEGG: bur:Bcep18194_B0950 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 728633..729913 Burkholderia cenocepacia AU 1054 4095473 YP_623469.1 CDS Bcen_3603 NC_008061.1 729980 731041 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B0951 NADH-flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(729980..731041) Burkholderia cenocepacia AU 1054 4095474 YP_623470.1 CDS Bcen_3604 NC_008061.1 731123 731431 R PFAM: regulatory protein, ArsR; KEGG: bur:Bcep18194_B0952 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(731123..731431) Burkholderia cenocepacia AU 1054 4095475 YP_623471.1 CDS Bcen_3605 NC_008061.1 731683 732393 D TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_B0962 haloacid dehalogenase-like hydrolase; HAD family hydrolase 731683..732393 Burkholderia cenocepacia AU 1054 4095476 YP_623472.1 CDS Bcen_3606 NC_008061.1 732404 733648 D KEGG: bur:Bcep18194_B0964 hypothetical protein; hypothetical protein 732404..733648 Burkholderia cenocepacia AU 1054 4095477 YP_623473.1 CDS Bcen_3607 NC_008061.1 733802 734140 R PFAM: blue (type 1) copper domain; KEGG: bur:Bcep18194_B0968 plastocyanin; blue (type1) copper domain-containing protein complement(733802..734140) Burkholderia cenocepacia AU 1054 4095478 YP_623474.1 CDS Bcen_3608 NC_008061.1 734160 735104 R PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B0969 metallophosphoesterase; metallophosphoesterase complement(734160..735104) Burkholderia cenocepacia AU 1054 4095479 YP_623475.1 CDS Bcen_3609 NC_008061.1 735359 735568 D KEGG: bur:Bcep18194_B0970 phosphate transporter; phosphate transporter 735359..735568 Burkholderia cenocepacia AU 1054 4095480 YP_623476.1 CDS Bcen_3610 NC_008061.1 735656 737410 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0971 ABC anion transporter, fused inner membrane subunits; binding-protein-dependent transport system inner membrane protein 735656..737410 Burkholderia cenocepacia AU 1054 4095481 YP_623477.1 CDS Bcen_3611 NC_008061.1 737422 738768 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B0972 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit; ABC transporter 737422..738768 Burkholderia cenocepacia AU 1054 4095482 YP_623478.1 CDS Bcen_3612 NC_008061.1 738796 739674 R PFAM: helix-turn-helix protein RpiR; KEGG: bur:Bcep18194_B0995 transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(738796..739674) Burkholderia cenocepacia AU 1054 4095483 YP_623479.1 CDS Bcen_3613 NC_008061.1 740047 741798 D PFAM: gamma-glutamyltranspeptidase; KEGG: bur:Bcep18194_B0996 gamma-glutamyltransferase; gamma-glutamyltransferase 740047..741798 Burkholderia cenocepacia AU 1054 4095484 YP_623480.1 CDS Bcen_3614 NC_008061.1 741953 743281 D PFAM: sodium:dicarboxylate symporter; KEGG: bur:Bcep18194_B0997 sodium/dicarboxylate symporter; sodium:dicarboxylate symporter 741953..743281 Burkholderia cenocepacia AU 1054 4095485 YP_623481.1 CDS Bcen_3615 NC_008061.1 743285 743674 R KEGG: bur:Bcep18194_B0998 hypothetical protein; hypothetical protein complement(743285..743674) Burkholderia cenocepacia AU 1054 4095486 YP_623482.1 CDS Bcen_3616 NC_008061.1 743719 745011 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B0999 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(743719..745011) Burkholderia cenocepacia AU 1054 4095487 YP_623483.1 CDS Bcen_3617 NC_008061.1 745158 745817 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B1000 transcriptional regulator, TetR family; TetR family transcriptional regulator 745158..745817 Burkholderia cenocepacia AU 1054 4095488 YP_623484.1 CDS Bcen_3618 NC_008061.1 745842 746753 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1001 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(745842..746753) Burkholderia cenocepacia AU 1054 4095489 YP_623485.1 CDS Bcen_3619 NC_008061.1 746862 747623 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B1002 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 746862..747623 Burkholderia cenocepacia AU 1054 4095490 YP_623486.1 CDS Bcen_3620 NC_008061.1 747648 748127 R TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_B1003 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(747648..748127) Burkholderia cenocepacia AU 1054 4095491 YP_623487.1 CDS Bcen_3621 NC_008061.1 748207 749409 D PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_B1004 secretion protein, HlyD family; secretion protein HlyD 748207..749409 Burkholderia cenocepacia AU 1054 4095299 YP_623488.1 CDS Bcen_3623 NC_008061.1 752593 754104 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B1006 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT 752593..754104 Burkholderia cenocepacia AU 1054 4095301 YP_623489.1 CDS Bcen_3624 NC_008061.1 754237 754692 D PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B1008 transcriptional regulator, MarR family; MarR family transcriptional regulator 754237..754692 Burkholderia cenocepacia AU 1054 4095302 YP_623490.1 CDS Bcen_3625 NC_008061.1 754943 755590 D PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_B1010 glutathione S-transferase-like; glutathione S-transferase 754943..755590 Burkholderia cenocepacia AU 1054 4095303 YP_623491.1 CDS Bcen_3626 NC_008061.1 755798 757135 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1016 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 755798..757135 Burkholderia cenocepacia AU 1054 4095304 YP_623492.1 CDS Bcen_3627 NC_008061.1 757289 757924 D PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_B1017 isochorismatase hydrolase; isochorismatase hydrolase 757289..757924 Burkholderia cenocepacia AU 1054 4095305 YP_623493.1 CDS Bcen_3628 NC_008061.1 757986 758462 R PFAM: protein of unknown function DUF1486; KEGG: bur:Bcep18194_B1020 hypothetical protein; hypothetical protein complement(757986..758462) Burkholderia cenocepacia AU 1054 4095306 YP_623494.1 CDS Bcen_3629 NC_008061.1 758479 758742 D hypothetical protein 758479..758742 Burkholderia cenocepacia AU 1054 4095307 YP_623495.1 CDS Bcen_3630 NC_008061.1 758793 759179 D PFAM: helix-turn-helix, HxlR type; KEGG: bur:Bcep18194_B1021 transcriptional regulator; HxlR family transcriptional regulator 758793..759179 Burkholderia cenocepacia AU 1054 4095308 YP_623496.1 CDS Bcen_3631 NC_008061.1 759430 759801 R TIGRFAM: Twin-arginine translocation pathway signal; KEGG: bur:Bcep18194_B1022 hypothetical protein; twin-arginine translocation pathway signal complement(759430..759801) Burkholderia cenocepacia AU 1054 4095309 YP_623497.1 CDS Bcen_3632 NC_008061.1 760388 761476 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B1023 outer membrane protein (porin); porin 760388..761476 Burkholderia cenocepacia AU 1054 4095310 YP_623498.1 CDS Bcen_3633 NC_008061.1 761654 762052 R PFAM: transcription elongation factor GreA/GreB region; KEGG: bur:Bcep18194_B1024 GreA/GreB family elongation factor; GreA/GreB family elongation factor complement(761654..762052) Burkholderia cenocepacia AU 1054 4095311 YP_623499.1 CDS Bcen_3634 NC_008061.1 762565 762894 D KEGG: bur:Bcep18194_B1025 hypothetical protein; hypothetical protein 762565..762894 Burkholderia cenocepacia AU 1054 4095312 YP_623500.1 CDS Bcen_3635 NC_008061.1 763051 763512 R PFAM: CBS; KEGG: bur:Bcep18194_B1026 signal-transduction protein with CBS domains; signal-transduction protein complement(763051..763512) Burkholderia cenocepacia AU 1054 4095313 YP_623501.1 CDS Bcen_3636 NC_008061.1 763689 764339 D PFAM: GTP cyclohydrolase II; KEGG: bur:Bcep18194_B1027 GTP cyclohydrolase II; GTP cyclohydrolase II 763689..764339 Burkholderia cenocepacia AU 1054 4095314 YP_623502.1 CDS Bcen_3637 NC_008061.1 764464 765033 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1047 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 764464..765033 Burkholderia cenocepacia AU 1054 4095315 YP_623503.1 CDS Bcen_3638 NC_008061.1 765055 765474 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B1048 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(765055..765474) Burkholderia cenocepacia AU 1054 4095316 YP_623504.1 CDS Bcen_3639 NC_008061.1 765741 766031 D hypothetical protein 765741..766031 Burkholderia cenocepacia AU 1054 4095317 YP_623505.1 CDS Bcen_3640 NC_008061.1 766237 766974 R KEGG: bur:Bcep18194_B1049 hypothetical protein; hypothetical protein complement(766237..766974) Burkholderia cenocepacia AU 1054 4095222 YP_623506.1 CDS Bcen_3641 NC_008061.1 767052 767660 R PFAM: autoinducer synthesis protein; KEGG: bur:Bcep18194_B1050 autoinducer synthesis protein; autoinducer synthesis protein complement(767052..767660) Burkholderia cenocepacia AU 1054 4095223 YP_623507.1 CDS Bcen_3642 NC_008061.1 767871 768314 R KEGG: bur:Bcep18194_B1051 hypothetical protein; hypothetical protein complement(767871..768314) Burkholderia cenocepacia AU 1054 4095224 YP_623508.1 CDS Bcen_3643 NC_008061.1 768388 769107 D PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B1052 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 768388..769107 Burkholderia cenocepacia AU 1054 4095225 YP_623509.1 CDS Bcen_3644 NC_008061.1 769156 769863 R PFAM: MgtC/SapB transporter; KEGG: bur:Bcep18194_B1053 MgtC/SapB transporter; MgtC/SapB transporter complement(769156..769863) Burkholderia cenocepacia AU 1054 4095226 YP_623510.1 CDS Bcen_3645 NC_008061.1 770169 771713 R PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B1054 outer membrane efflux protein; outer membrane efflux protein complement(770169..771713) Burkholderia cenocepacia AU 1054 4095227 YP_623511.1 CDS Bcen_3646 NC_008061.1 771700 773766 R KEGG: reu:Reut_B4353 fusaric acid resistance protein conserved region; fusaric acid resistance protein region complement(771700..773766) Burkholderia cenocepacia AU 1054 4095228 YP_623512.1 CDS Bcen_3647 NC_008061.1 773747 774796 R with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; multidrug resistance protein MdtN complement(773747..774796) Burkholderia cenocepacia AU 1054 4095229 YP_623513.1 CDS Bcen_3648 NC_008061.1 774793 775086 R KEGG: bur:Bcep18194_B1057 hypothetical protein; hypothetical protein complement(774793..775086) Burkholderia cenocepacia AU 1054 4095230 YP_623514.1 CDS Bcen_3649 NC_008061.1 775459 776361 R PFAM: regulatory protein, LysR; KEGG: bbr:BB2959 probable transcriptional regulator; LysR family transcriptional regulator complement(775459..776361) Burkholderia cenocepacia AU 1054 4095231 YP_623515.1 CDS Bcen_3650 NC_008061.1 776550 777695 D PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B1059 metallophosphoesterase; metallophosphoesterase 776550..777695 Burkholderia cenocepacia AU 1054 4095232 YP_623516.1 CDS Bcen_3651 NC_008061.1 777828 778466 D PFAM: 2OG-Fe(II) oxygenase; KEGG: bur:Bcep18194_B1061 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 777828..778466 Burkholderia cenocepacia AU 1054 4095233 YP_623517.1 CDS Bcen_3652 NC_008061.1 778628 778978 D KEGG: bur:Bcep18194_B1062 hypothetical protein; hypothetical protein 778628..778978 Burkholderia cenocepacia AU 1054 4095234 YP_623518.1 CDS Bcen_3653 NC_008061.1 779302 779781 D KEGG: bur:Bcep18194_B1099 hypothetical protein; hypothetical protein 779302..779781 Burkholderia cenocepacia AU 1054 4095235 YP_623519.1 CDS Bcen_3654 NC_008061.1 780071 780967 D PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_B1101 transcriptional regulator, IclR family; IclR family transcriptional regulator 780071..780967 Burkholderia cenocepacia AU 1054 4095236 YP_623520.1 CDS Bcen_3655 NC_008061.1 781076 782155 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B1102 outer membrane protein (porin); porin complement(781076..782155) Burkholderia cenocepacia AU 1054 4095237 YP_623521.1 CDS Bcen_3656 NC_008061.1 782590 782907 D PFAM: Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_B1103 Rieske (2Fe-2S) protein; Rieske (2Fe-2S) protein 782590..782907 Burkholderia cenocepacia AU 1054 4095238 YP_623522.1 CDS Bcen_3657 NC_008061.1 782909 783220 D KEGG: bur:Bcep18194_B1104 hypothetical protein; hypothetical protein 782909..783220 Burkholderia cenocepacia AU 1054 4095239 YP_623523.1 CDS Bcen_3658 NC_008061.1 783281 784351 D PFAM: Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_B1105 Rieske (2Fe-2S) protein; Rieske (2Fe-2S) protein 783281..784351 Burkholderia cenocepacia AU 1054 4095240 YP_623524.1 CDS Bcen_3659 NC_008061.1 784344 785114 D member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase 784344..785114 Burkholderia cenocepacia AU 1054 4095241 YP_623525.1 CDS Bcen_3660 NC_008061.1 785149 785676 D PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_B1107 hypothetical protein; cupin 785149..785676 Burkholderia cenocepacia AU 1054 4095593 YP_623526.1 CDS Bcen_3661 NC_008061.1 785695 786612 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1108 alpha/beta hydrolase; alpha/beta hydrolase 785695..786612 Burkholderia cenocepacia AU 1054 4095594 YP_623527.1 CDS Bcen_3662 NC_008061.1 786609 787466 D PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_B1109 transcriptional regulator, IclR family; IclR family transcriptional regulator 786609..787466 Burkholderia cenocepacia AU 1054 4095595 YP_623528.1 CDS Bcen_3663 NC_008061.1 787463 788260 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B1110 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 787463..788260 Burkholderia cenocepacia AU 1054 4095596 YP_623529.1 CDS Bcen_3664 NC_008061.1 788253 789920 D PFAM: thiamine pyrophosphate enzyme-like TPP-binding; KEGG: bur:Bcep18194_B1111 thiamine pyrophosphate-requiring enzyme; hypothetical protein 788253..789920 Burkholderia cenocepacia AU 1054 4095597 YP_623530.1 CDS Bcen_3665 NC_008061.1 789913 790740 D catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase 789913..790740 Burkholderia cenocepacia AU 1054 4095598 YP_623531.1 CDS Bcen_3666 NC_008061.1 790813 792303 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B1113 betaine-aldehyde dehydrogenase; betaine-aldehyde dehydrogenase 790813..792303 Burkholderia cenocepacia AU 1054 4095599 YP_623532.1 CDS Bcen_3667 NC_008061.1 792322 793284 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B1114 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 792322..793284 Burkholderia cenocepacia AU 1054 4095600 YP_623533.1 CDS Bcen_3668 NC_008061.1 793281 794525 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B1115 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 793281..794525 Burkholderia cenocepacia AU 1054 4095601 YP_623534.1 CDS Bcen_3669 NC_008061.1 794564 795964 D PFAM: General substrate transporter; KEGG: bur:Bcep18194_B1116 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 794564..795964 Burkholderia cenocepacia AU 1054 4095602 YP_623535.1 CDS Bcen_3670 NC_008061.1 796136 796687 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1117 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 796136..796687 Burkholderia cenocepacia AU 1054 4095603 YP_623536.1 CDS Bcen_3671 NC_008061.1 796763 797164 D PFAM: protein of unknown function DUF296; KEGG: bur:Bcep18194_B1123 protein of unknown function DUF296; hypothetical protein 796763..797164 Burkholderia cenocepacia AU 1054 4095604 YP_623537.1 CDS Bcen_3672 NC_008061.1 797311 799896 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(797311..799896) Burkholderia cenocepacia AU 1054 4095605 YP_623538.1 CDS Bcen_3673 NC_008061.1 800303 801067 D KEGG: bur:Bcep18194_B1126 hypothetical protein; hypothetical protein 800303..801067 Burkholderia cenocepacia AU 1054 4095606 YP_623539.1 CDS Bcen_3674 NC_008061.1 801090 801563 R PFAM: protein of unknown function DUF1486; KEGG: bur:Bcep18194_B1127 hypothetical protein; hypothetical protein complement(801090..801563) Burkholderia cenocepacia AU 1054 4095607 YP_623540.1 CDS Bcen_3675 NC_008061.1 801703 801951 R KEGG: bur:Bcep18194_B1129 hypothetical protein; hypothetical protein complement(801703..801951) Burkholderia cenocepacia AU 1054 4095608 YP_623541.1 CDS Bcen_3676 NC_008061.1 802115 802411 R hypothetical protein complement(802115..802411) Burkholderia cenocepacia AU 1054 4095609 YP_623542.1 CDS Bcen_3677 NC_008061.1 802427 802861 R KEGG: bur:Bcep18194_B1130 hypothetical protein; hypothetical protein complement(802427..802861) Burkholderia cenocepacia AU 1054 4095610 YP_623543.1 CDS Bcen_3678 NC_008061.1 803226 804710 D catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 803226..804710 Burkholderia cenocepacia AU 1054 4095611 YP_623544.1 CDS Bcen_3679 NC_008061.1 805087 805773 D KEGG: bur:Bcep18194_B1132 hypothetical protein; hypothetical protein 805087..805773 Burkholderia cenocepacia AU 1054 4095632 YP_623545.1 CDS Bcen_3680 NC_008061.1 805929 806759 D PFAM: N-acetyltransferase; KEGG: bur:Bcep18194_B1133 N-hydroxyarylamine O-acetyltransferase; arylamine N-acetyltransferase 805929..806759 Burkholderia cenocepacia AU 1054 4095633 YP_623546.1 CDS Bcen_3681 NC_008061.1 806851 807027 D KEGG: bur:Bcep18194_B1134 helix-turn-helix protein, CopG; helix-turn-helix protein, CopG 806851..807027 Burkholderia cenocepacia AU 1054 4095634 YP_623547.1 CDS Bcen_3682 NC_008061.1 807030 807380 D KEGG: bur:Bcep18194_B1135 hypothetical protein; hypothetical protein 807030..807380 Burkholderia cenocepacia AU 1054 4095635 YP_623548.1 CDS Bcen_3683 NC_008061.1 807388 808251 D TIGRFAM: Protein of unknown function Mtu_121; PFAM: O-methyltransferase-like; KEGG: bur:Bcep18194_B1136 protein of unknown function Mtu_121; hypothetical protein 807388..808251 Burkholderia cenocepacia AU 1054 4095636 YP_623549.1 CDS Bcen_3684 NC_008061.1 808274 813115 R PFAM: NAD-glutamate dehydrogenase; KEGG: bur:Bcep18194_B1137 NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase complement(808274..813115) Burkholderia cenocepacia AU 1054 4095637 YP_623550.1 CDS Bcen_3685 NC_008061.1 813256 813486 R KEGG: stm:STM0295 cytoplasmic protein; hypothetical protein complement(813256..813486) Burkholderia cenocepacia AU 1054 4095638 YP_623551.1 CDS Bcen_3686 NC_008061.1 813925 814113 R 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase complement(813925..814113) Burkholderia cenocepacia AU 1054 4095639 YP_623552.1 CDS Bcen_3687 NC_008061.1 814184 814957 R PFAM: class II aldolase/adducin-like; KEGG: bur:Bcep18194_B1139 class II aldolase/adducin-like; aldolase II superfamily protein complement(814184..814957) Burkholderia cenocepacia AU 1054 4095640 YP_623553.1 CDS Bcen_3688 NC_008061.1 814935 815825 R PFAM: Urea transporter; KEGG: bur:Bcep18194_B1140 UreA transporter; Urea transporter complement(814935..815825) Burkholderia cenocepacia AU 1054 4095641 YP_623554.1 CDS Bcen_3689 NC_008061.1 816077 817339 R PFAM: transposase, IS111A/IS1328/IS1533; KEGG: bte:BTH_II1545 ISBma3, transposase; transposase IS116/IS110/IS902 complement(816077..817339) Burkholderia cenocepacia AU 1054 4095642 YP_623555.1 CDS Bcen_3690 NC_008061.1 817639 818193 D PFAM: protein of unknown function DUF1089; KEGG: bur:Bcep18194_B1141 protein of unknown function DUF1089; hypothetical protein 817639..818193 Burkholderia cenocepacia AU 1054 4095643 YP_623556.1 CDS Bcen_3691 NC_008061.1 818154 819092 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1142 alpha/beta hydrolase; alpha/beta hydrolase complement(818154..819092) Burkholderia cenocepacia AU 1054 4095644 YP_623557.1 CDS Bcen_3692 NC_008061.1 819097 820002 R KEGG: bur:Bcep18194_B1143 metal-dependent hydrolase; metal-dependent hydrolase complement(819097..820002) Burkholderia cenocepacia AU 1054 4095645 YP_623558.1 CDS Bcen_3693 NC_008061.1 819999 820928 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B1144 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(819999..820928) Burkholderia cenocepacia AU 1054 4095646 YP_623559.1 CDS Bcen_3694 NC_008061.1 820949 822529 R KEGG: bur:Bcep18194_B1145 flavin-containing monooxygenase FMO; flavin-containing monooxygenase FMO complement(820949..822529) Burkholderia cenocepacia AU 1054 4095647 YP_623560.1 CDS Bcen_3695 NC_008061.1 822776 823516 R PFAM: YhhN-like; KEGG: bur:Bcep18194_B1146 membrane protein, YhhN-like; YhhN-like protein complement(822776..823516) Burkholderia cenocepacia AU 1054 4095648 YP_623561.1 CDS Bcen_3696 NC_008061.1 823799 824767 D catalyzes the formation of putrescine from agmatine; agmatinase 823799..824767 Burkholderia cenocepacia AU 1054 4095649 YP_623562.1 CDS Bcen_3697 NC_008061.1 824847 825827 R KEGG: bur:Bcep18194_B1152 ABC transporter, substrate-binding protein, aliphatic sulphonates TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; ABC transporter, substrate-binding protein, aliphatic sulfonates complement(824847..825827) Burkholderia cenocepacia AU 1054 4095650 YP_623563.1 CDS Bcen_3698 NC_008061.1 825951 826799 R PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_B1153 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(825951..826799) Burkholderia cenocepacia AU 1054 4095651 YP_623564.1 CDS Bcen_3699 NC_008061.1 826809 827369 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1154 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(826809..827369) Burkholderia cenocepacia AU 1054 4095007 YP_623565.1 CDS Bcen_3700 NC_008061.1 827450 828370 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1155 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(827450..828370) Burkholderia cenocepacia AU 1054 4095008 YP_623566.1 CDS Bcen_3701 NC_008061.1 828463 829461 D PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B1156 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase 828463..829461 Burkholderia cenocepacia AU 1054 4095009 YP_623567.1 CDS Bcen_3702 NC_008061.1 829521 831050 R TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1157 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(829521..831050) Burkholderia cenocepacia AU 1054 4095010 YP_623568.1 CDS Bcen_3703 NC_008061.1 831266 832825 D PFAM: histidine kinase, HAMP region; KEGG: bur:Bcep18194_B1158 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 831266..832825 Burkholderia cenocepacia AU 1054 4095011 YP_623569.1 CDS Bcen_3704 NC_008061.1 832877 834550 R KEGG: bur:Bcep18194_B1159 hypothetical protein; hypothetical protein complement(832877..834550) Burkholderia cenocepacia AU 1054 4095012 YP_623570.1 CDS Bcen_3705 NC_008061.1 834678 835532 R KEGG: bur:Bcep18194_B1160 response regulator receiver domain protein (CheY-like); response regulator receiver protein complement(834678..835532) Burkholderia cenocepacia AU 1054 4095013 YP_623571.1 CDS Bcen_3706 NC_008061.1 836009 836218 D KEGG: bur:Bcep18194_B1029 hypothetical protein; hypothetical protein 836009..836218 Burkholderia cenocepacia AU 1054 4095014 YP_623572.1 CDS Bcen_3707 NC_008061.1 836392 836667 D hypothetical protein 836392..836667 Burkholderia cenocepacia AU 1054 4095015 YP_623573.1 CDS Bcen_3708 NC_008061.1 836674 836955 D hypothetical protein 836674..836955 Burkholderia cenocepacia AU 1054 4095016 YP_623574.1 CDS Bcen_3709 NC_008061.1 836952 838286 D PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B1161 FAD dependent oxidoreductase; FAD dependent oxidoreductase 836952..838286 Burkholderia cenocepacia AU 1054 4095017 YP_623575.1 CDS Bcen_3710 NC_008061.1 838347 839441 D PFAM: TrkA-N; KEGG: bur:Bcep18194_B1162 TrkA-like protein; hypothetical protein 838347..839441 Burkholderia cenocepacia AU 1054 4095018 YP_623576.1 CDS Bcen_3711 NC_008061.1 839634 840542 R PFAM: regulatory protein, LysR; KEGG: reu:Reut_C6370 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator complement(839634..840542) Burkholderia cenocepacia AU 1054 4095019 YP_623577.1 CDS Bcen_3712 NC_008061.1 840686 841558 D PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: psp:PSPPH_3467 3-hydroxyisobutyrate dehydrogenase family protein; 6-phosphogluconate dehydrogenase 840686..841558 Burkholderia cenocepacia AU 1054 4095020 YP_623578.1 CDS Bcen_3713 NC_008061.1 841613 843130 D PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_C6374 betaine-aldehyde dehydrogenase; betaine-aldehyde dehydrogenase 841613..843130 Burkholderia cenocepacia AU 1054 4095021 YP_623579.1 CDS Bcen_3714 NC_008061.1 843179 844513 D KEGG: psp:PSPPH_3459 hypothetical protein; hypothetical protein 843179..844513 Burkholderia cenocepacia AU 1054 4095022 YP_623580.1 CDS Bcen_3715 NC_008061.1 844540 845787 D KEGG: rso:RSc2871 hippurate hydrolase protein TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation; peptidase M20D, amidohydrolase 844540..845787 Burkholderia cenocepacia AU 1054 4095023 YP_623581.1 CDS Bcen_3716 NC_008061.1 845847 847049 D PFAM: major facilitator superfamily MFS_1; KEGG: pst:PSPTO1339 hypothetical protein; major facilitator transporter 845847..847049 Burkholderia cenocepacia AU 1054 4095024 YP_623582.1 CDS Bcen_3717 NC_008061.1 847092 847823 R SMART: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_C7267 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(847092..847823) Burkholderia cenocepacia AU 1054 4095025 YP_623583.1 CDS Bcen_3718 NC_008061.1 847868 849148 R PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM1543 transport protein; major facilitator transporter complement(847868..849148) Burkholderia cenocepacia AU 1054 4095046 YP_623584.1 CDS Bcen_3719 NC_008061.1 849289 850338 R PFAM: Malate/L-lactate dehydrogenase; KEGG: mka:MK0392 L-sulfolactate dehydrogenase; (R)-2-hydroxyacid dehydrogenase complement(849289..850338) Burkholderia cenocepacia AU 1054 4095047 YP_623585.1 CDS Bcen_3720 NC_008061.1 850559 851476 R PFAM: regulatory protein, LysR; KEGG: pfl:PFL_2496 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(850559..851476) Burkholderia cenocepacia AU 1054 4095048 YP_623586.1 CDS Bcen_3721 NC_008061.1 851647 852546 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_C7135 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(851647..852546) Burkholderia cenocepacia AU 1054 4095049 YP_623587.1 CDS Bcen_3722 NC_008061.1 852717 853676 D PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_C7134 aldo/keto reductase; aldo/keto reductase 852717..853676 Burkholderia cenocepacia AU 1054 4095050 YP_623588.1 CDS Bcen_3723 NC_008061.1 853797 854786 D PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: ttj:TTHA0153 NADPH:quinone reductase; zinc-binding alcohol dehydrogenase 853797..854786 Burkholderia cenocepacia AU 1054 4095051 YP_623589.1 CDS Bcen_3724 NC_008061.1 854916 855383 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bte:BTH_I0319 AsnC family regulatory protein; AsnC family transcriptional regulator complement(854916..855383) Burkholderia cenocepacia AU 1054 4095052 YP_623590.1 CDS Bcen_3725 NC_008061.1 855557 856654 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 855557..856654 Burkholderia cenocepacia AU 1054 4095053 YP_623591.1 CDS Bcen_3726 NC_008061.1 856693 858708 D KEGG: sme:SMc00481 hypothetical protein; hypothetical protein 856693..858708 Burkholderia cenocepacia AU 1054 4095054 YP_623592.1 CDS Bcen_3727 NC_008061.1 858697 860226 R PFAM: Mannitol dehydrogenase-like; KEGG: zmo:ZMO1449 L-sorbose reductase; mannitol dehydrogenase Rossman-like protein complement(858697..860226) Burkholderia cenocepacia AU 1054 4095055 YP_623593.1 CDS Bcen_3728 NC_008061.1 860257 860985 R TIGRFAM: HAD-superfamily hydrolase subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bte:BTH_I0698 HAD-superfamily hydrolase; HAD family hydrolase complement(860257..860985) Burkholderia cenocepacia AU 1054 4095056 YP_623594.1 CDS Bcen_3729 NC_008061.1 861041 862456 R TIGRFAM: Sugar transporter; PFAM: General substrate transporter; KEGG: zmo:ZMO0293 metabolite/sugar transport protein; sugar transporter complement(861041..862456) Burkholderia cenocepacia AU 1054 4095057 YP_623595.1 CDS Bcen_3730 NC_008061.1 863113 864051 R PFAM: regulatory protein, LuxR; KEGG: dar:Daro_1445 regulatory protein, LuxR:response regulator receiver; two component LuxR family transcriptional regulator complement(863113..864051) Burkholderia cenocepacia AU 1054 4095058 YP_623596.1 CDS Bcen_3731 NC_008061.1 864119 867541 R PFAM: response regulator receiver; KEGG: pst:PSPTO4079 sensor histidine kinase/response regulator; periplasmic sensor hybrid histidine kinase complement(864119..867541) Burkholderia cenocepacia AU 1054 4095059 YP_623597.1 CDS Bcen_3732 NC_008061.1 867766 869040 D KEGG: pst:PSPTO4078 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein; branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein 867766..869040 Burkholderia cenocepacia AU 1054 4095060 YP_623598.1 CDS Bcen_3733 NC_008061.1 869096 870013 D PFAM: inner-membrane translocator; KEGG: pst:PSPTO4077 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 869096..870013 Burkholderia cenocepacia AU 1054 4095061 YP_623599.1 CDS Bcen_3734 NC_008061.1 870069 871238 D PFAM: inner-membrane translocator; KEGG: pst:PSPTO4076 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 870069..871238 Burkholderia cenocepacia AU 1054 4095062 YP_623600.1 CDS Bcen_3735 NC_008061.1 871242 871985 D PFAM: ABC transporter related; KEGG: pst:PSPTO4075 branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter 871242..871985 Burkholderia cenocepacia AU 1054 4095063 YP_623601.1 CDS Bcen_3736 NC_008061.1 872020 872709 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bja:blr0971 ABC transporter ATP-binding protein; ABC transporter 872020..872709 Burkholderia cenocepacia AU 1054 4095064 YP_623602.1 CDS Bcen_3737 NC_008061.1 872772 874010 D PFAM: Acetamidase/Formamidase; KEGG: rpa:RPA1255 formamide amidohydrolase; formamidase 872772..874010 Burkholderia cenocepacia AU 1054 4095065 YP_623603.1 CDS Bcen_3738 NC_008061.1 874048 874383 D TIGRFAM: regulatory protein, FmdB; KEGG: rpb:RPB_1258 formamidase regulatory protein FmdB; FmdB transcriptional regulator 874048..874383 Burkholderia cenocepacia AU 1054 4095085 YP_623604.1 CDS amiE NC_008061.1 874468 875493 D aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates; acylamide amidohydrolase 874468..875493 Burkholderia cenocepacia AU 1054 4095086 YP_623605.1 CDS Bcen_3740 NC_008061.1 875615 876784 R PFAM: porin, Gram-negative type; KEGG: bte:BTH_II0215 outer membrane porin OpcP; porin complement(875615..876784) Burkholderia cenocepacia AU 1054 4095087 YP_623606.1 CDS Bcen_3741 NC_008061.1 877163 877468 R KEGG: bte:BTH_I0273 hypothetical protein; hypothetical protein complement(877163..877468) Burkholderia cenocepacia AU 1054 4095088 YP_623607.1 CDS Bcen_3742 NC_008061.1 877746 877955 D hypothetical protein 877746..877955 Burkholderia cenocepacia AU 1054 4095089 YP_623608.1 CDS Bcen_3743 NC_008061.1 878248 878994 D PFAM: response regulator receiver; KEGG: bte:BTH_I0274 DNA-binding response regulator; two component transcriptional regulator 878248..878994 Burkholderia cenocepacia AU 1054 4095090 YP_623609.1 CDS Bcen_3744 NC_008061.1 878987 880405 D PFAM: ATP-binding region, ATPase-like; KEGG: bte:BTH_I0275 sensor histidine kinase; sensor signal transduction histidine kinase 878987..880405 Burkholderia cenocepacia AU 1054 4095091 YP_623610.1 CDS Bcen_3745 NC_008061.1 880463 881146 D PFAM: transcriptional regulatory protein-like; KEGG: gox:GOX0830 two component response regulator; two component transcriptional regulator 880463..881146 Burkholderia cenocepacia AU 1054 4095092 YP_623611.1 CDS Bcen_3746 NC_008061.1 881143 881463 D hypothetical protein 881143..881463 Burkholderia cenocepacia AU 1054 4095093 YP_623612.1 CDS Bcen_3747 NC_008061.1 881451 881723 R hypothetical protein complement(881451..881723) Burkholderia cenocepacia AU 1054 4095094 YP_623613.1 CDS Bcen_3748 NC_008061.1 882000 883229 D PFAM: porin, Gram-negative type; KEGG: bma:BMA1125 outer membrane porin OpcP; porin 882000..883229 Burkholderia cenocepacia AU 1054 4095095 YP_623614.1 CDS Bcen_3749 NC_008061.1 883314 884780 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: pfl:PFL_2556 outer membrane efflux protein; RND efflux system, outer membrane lipoprotein, NodT complement(883314..884780) Burkholderia cenocepacia AU 1054 4095096 YP_623615.1 CDS Bcen_3750 NC_008061.1 884773 885978 R PFAM: secretion protein HlyD; KEGG: bja:blr2935 hypothetical protein; secretion protein HlyD complement(884773..885978) Burkholderia cenocepacia AU 1054 4095097 YP_623616.1 CDS Bcen_3751 NC_008061.1 885968 889222 R PFAM: acriflavin resistance protein; KEGG: bja:blr2934 probable cation efflux protein; acriflavin resistance protein complement(885968..889222) Burkholderia cenocepacia AU 1054 4095098 YP_623617.1 CDS Bcen_3752 NC_008061.1 889377 890051 R PFAM: response regulator receiver; KEGG: bte:BTH_I0274 DNA-binding response regulator; two component transcriptional regulator complement(889377..890051) Burkholderia cenocepacia AU 1054 4095099 YP_623618.1 CDS Bcen_3753 NC_008061.1 890073 890996 R PFAM: regulatory protein, LysR; KEGG: bte:BTH_I0276 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(890073..890996) Burkholderia cenocepacia AU 1054 4095100 YP_623619.1 CDS Bcen_3754 NC_008061.1 891311 891685 D KEGG: bte:BTH_I0278 hypothetical protein; hypothetical protein 891311..891685 Burkholderia cenocepacia AU 1054 4095101 YP_623620.1 CDS Bcen_3755 NC_008061.1 891796 892554 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B1229 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(891796..892554) Burkholderia cenocepacia AU 1054 4095102 YP_623621.1 CDS Bcen_3756 NC_008061.1 892867 894153 D PFAM: cytochrome c, class I; KEGG: bps:BPSS0977 cytochrome c subunit II; cytochrome c, class I 892867..894153 Burkholderia cenocepacia AU 1054 4095103 YP_623622.1 CDS Bcen_3757 NC_008061.1 894169 894702 D KEGG: bur:Bcep18194_C7346 hypothetical protein; hypothetical protein 894169..894702 Burkholderia cenocepacia AU 1054 4095712 YP_623623.1 CDS Bcen_3758 NC_008061.1 894729 896330 D PFAM: glucose-methanol-choline oxidoreductase; KEGG: zmo:ZMO0787 choline dehydrogenase; glucose-methanol-choline oxidoreductase 894729..896330 Burkholderia cenocepacia AU 1054 4095713 YP_623624.1 CDS Bcen_3759 NC_008061.1 896396 897349 R PFAM: esterase; KEGG: bur:Bcep18194_B1232 esterase; esterase complement(896396..897349) Burkholderia cenocepacia AU 1054 4095714 YP_623625.1 CDS Bcen_3760 NC_008061.1 897411 898508 R KEGG: bur:Bcep18194_B1233 hypothetical protein; hypothetical protein complement(897411..898508) Burkholderia cenocepacia AU 1054 4095715 YP_623626.1 CDS Bcen_3761 NC_008061.1 898890 900044 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B1234 outer membrane protein (porin); porin 898890..900044 Burkholderia cenocepacia AU 1054 4095716 YP_623627.1 CDS Bcen_3762 NC_008061.1 900088 900999 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1235 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(900088..900999) Burkholderia cenocepacia AU 1054 4095717 YP_623628.1 CDS Bcen_3763 NC_008061.1 901140 902141 D PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B1236 aldo/keto reductase; aldo/keto reductase 901140..902141 Burkholderia cenocepacia AU 1054 4095718 YP_623629.1 CDS Bcen_3764 NC_008061.1 902265 903014 D PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_B1237 protein of unknown function DUF81; hypothetical protein 902265..903014 Burkholderia cenocepacia AU 1054 4095719 YP_623630.1 CDS Bcen_3765 NC_008061.1 903098 905269 R KEGG: bur:Bcep18194_B1238 hypothetical protein; hypothetical protein complement(903098..905269) Burkholderia cenocepacia AU 1054 4095720 YP_623631.1 CDS Bcen_3766 NC_008061.1 905776 906162 R PFAM: protein of unknown function DUF1486; KEGG: mlo:mlr2224 hypothetical protein; hypothetical protein complement(905776..906162) Burkholderia cenocepacia AU 1054 4095721 YP_623632.1 CDS Bcen_3767 NC_008061.1 906209 907105 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1243 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(906209..907105) Burkholderia cenocepacia AU 1054 4095722 YP_623633.1 CDS Bcen_3768 NC_008061.1 907605 908474 D PFAM: Peptidoglycan-binding LysM; KEGG: bur:Bcep18194_B1244 peptidase M23B; peptidase M23B 907605..908474 Burkholderia cenocepacia AU 1054 4095723 YP_623634.1 CDS Bcen_3769 NC_008061.1 908585 909583 D PFAM: beta-lactamase; KEGG: bur:Bcep18194_B1245 beta-lactamase; Beta-lactamase 908585..909583 Burkholderia cenocepacia AU 1054 4095724 YP_623635.1 CDS Bcen_3770 NC_008061.1 909690 910562 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1246 transcriptional regulator, LysR family; LysR family transcriptional regulator 909690..910562 Burkholderia cenocepacia AU 1054 4095725 YP_623636.1 CDS Bcen_3771 NC_008061.1 910584 910913 R KEGG: bte:BTH_II1448 hypothetical protein; hypothetical protein complement(910584..910913) Burkholderia cenocepacia AU 1054 4095726 YP_623637.1 CDS Bcen_3772 NC_008061.1 911244 911498 R PFAM: Transglycosylase-associated protein; KEGG: bur:Bcep18194_B1248 transglycosylase-associated protein; transglycosylase-associated protein complement(911244..911498) Burkholderia cenocepacia AU 1054 4095727 YP_623638.1 CDS Bcen_3773 NC_008061.1 911625 912401 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B1249 ABC dipeptide/oligopeptide/nickel family transporter, ATPase subunit; ABC transporter complement(911625..912401) Burkholderia cenocepacia AU 1054 4095728 YP_623639.1 CDS Bcen_3774 NC_008061.1 912398 913312 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B1250 ABC dipeptide/oligopeptide/nickel family transporter, ATPase subunit; ABC transporter complement(912398..913312) Burkholderia cenocepacia AU 1054 4095729 YP_623640.1 CDS Bcen_3775 NC_008061.1 913314 914228 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1251 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(913314..914228) Burkholderia cenocepacia AU 1054 4095730 YP_623641.1 CDS Bcen_3776 NC_008061.1 914295 915365 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1252 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(914295..915365) Burkholderia cenocepacia AU 1054 4095731 YP_623642.1 CDS Bcen_3777 NC_008061.1 915376 916977 R PFAM: extracellular solute-binding protein, family 5; KEGG: bur:Bcep18194_B1253 ABC peptide transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(915376..916977) Burkholderia cenocepacia AU 1054 4094910 YP_623643.1 CDS Bcen_3778 NC_008061.1 917048 917611 R catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent; involved in peptidoglycan synthesis; D-alanyl-D-alanine dipeptidase complement(917048..917611) Burkholderia cenocepacia AU 1054 4094911 YP_623644.1 CDS Bcen_3779 NC_008061.1 917628 918515 R KEGG: bur:Bcep18194_B1255 transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(917628..918515) Burkholderia cenocepacia AU 1054 4094912 YP_623645.1 CDS Bcen_3780 NC_008061.1 918904 920160 D KEGG: bur:Bcep18194_B1256 thermophilic glucose-6-phosphate isomerase and related metalloenzymes TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Cupin; Cupin 2, conserved barrel; twin-arginine translocation pathway signal 918904..920160 Burkholderia cenocepacia AU 1054 4094913 YP_623646.1 CDS Bcen_3781 NC_008061.1 920261 921571 D TIGRFAM: NRAMP family Mn2+/Fe2+ transporters; PFAM: natural resistance-associated macrophage protein; KEGG: bur:Bcep18194_B1257 Mn2+ and Fe2+ transporters of the NRAMP family; manganese transporter NRAMP 920261..921571 Burkholderia cenocepacia AU 1054 4094914 YP_623647.1 CDS Bcen_3782 NC_008061.1 921591 922844 R hypothetical protein complement(921591..922844) Burkholderia cenocepacia AU 1054 4094915 YP_623648.1 CDS Bcen_3783 NC_008061.1 922986 924575 R PFAM: extracellular solute-binding protein, family 5; KEGG: bur:Bcep18194_B1258 ABC peptide transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(922986..924575) Burkholderia cenocepacia AU 1054 4094916 YP_623649.1 CDS Bcen_3784 NC_008061.1 924715 925050 R KEGG: bur:Bcep18194_B1259 hypothetical protein; hypothetical protein complement(924715..925050) Burkholderia cenocepacia AU 1054 4094917 YP_623650.1 CDS Bcen_3785 NC_008061.1 925339 926898 R TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1261 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(925339..926898) Burkholderia cenocepacia AU 1054 4094918 YP_623651.1 CDS Bcen_3786 NC_008061.1 927282 928193 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1262 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(927282..928193) Burkholderia cenocepacia AU 1054 4094919 YP_623652.1 CDS Bcen_3787 NC_008061.1 928340 930361 D PFAM: Fusaric acid resistance protein conserved region; KEGG: bur:Bcep18194_B1263 fusaric acid resistance protein; fusaric acid resistance protein region 928340..930361 Burkholderia cenocepacia AU 1054 4094920 YP_623653.1 CDS Bcen_3788 NC_008061.1 930386 931306 R PFAM: protein of unknown function UPF0187; KEGG: bur:Bcep18194_B1264 protein of unknown function UPF0187; hypothetical protein complement(930386..931306) Burkholderia cenocepacia AU 1054 4094921 YP_623654.1 CDS Bcen_3789 NC_008061.1 931319 933706 R KEGG: bur:Bcep18194_B1265 oxidoreductase alpha (molybdopterin) subunit TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; oxidoreductase alpha (molybdopterin) subunit complement(931319..933706) Burkholderia cenocepacia AU 1054 4094922 YP_623655.1 CDS Bcen_3790 NC_008061.1 933781 935217 D PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B1266 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator 933781..935217 Burkholderia cenocepacia AU 1054 4094923 YP_623656.1 CDS Bcen_3791 NC_008061.1 935276 936670 R PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_B1267 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel complement(935276..936670) Burkholderia cenocepacia AU 1054 4094924 YP_623657.1 CDS Bcen_3792 NC_008061.1 936840 938699 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bur:Bcep18194_B1268 sulphate transporter; sulfate transporter 936840..938699 Burkholderia cenocepacia AU 1054 4094925 YP_623658.1 CDS Bcen_3793 NC_008061.1 938712 939587 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1269 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(938712..939587) Burkholderia cenocepacia AU 1054 4094926 YP_623659.1 CDS Bcen_3794 NC_008061.1 939630 940283 D KEGG: bur:Bcep18194_B1270 threonine efflux protein-like; threonine efflux protein-like 939630..940283 Burkholderia cenocepacia AU 1054 4094927 YP_623660.1 CDS Bcen_3795 NC_008061.1 940348 941775 R TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1271 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(940348..941775) Burkholderia cenocepacia AU 1054 4094928 YP_623661.1 CDS Bcen_3796 NC_008061.1 941772 942335 R PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_B1272 isochorismatase hydrolase; isochorismatase hydrolase complement(941772..942335) Burkholderia cenocepacia AU 1054 4094559 YP_623662.1 CDS Bcen_3797 NC_008061.1 942400 942855 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B1273 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(942400..942855) Burkholderia cenocepacia AU 1054 4094560 YP_623663.1 CDS Bcen_3798 NC_008061.1 942927 943160 R KEGG: bur:Bcep18194_B1274 hypothetical protein; hypothetical protein complement(942927..943160) Burkholderia cenocepacia AU 1054 4094561 YP_623664.1 CDS Bcen_3799 NC_008061.1 943205 944287 R PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: bur:Bcep18194_B1275 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 complement(943205..944287) Burkholderia cenocepacia AU 1054 4094562 YP_623665.1 CDS Bcen_3800 NC_008061.1 944485 944793 R KEGG: bur:Bcep18194_B1277 hypothetical protein; hypothetical protein complement(944485..944793) Burkholderia cenocepacia AU 1054 4094563 YP_623666.1 CDS Bcen_3801 NC_008061.1 944815 945690 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1278 transcriptional regulator, LysR family; LysR family transcriptional regulator 944815..945690 Burkholderia cenocepacia AU 1054 4094564 YP_623667.1 CDS Bcen_3802 NC_008061.1 945687 946046 D KEGG: bur:Bcep18194_B1279 hypothetical protein; hypothetical protein 945687..946046 Burkholderia cenocepacia AU 1054 4094565 YP_623668.1 CDS Bcen_3803 NC_008061.1 946161 948926 R KEGG: bur:Bcep18194_B1281 magnesium-translocating P-type ATPase TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: cation transporting ATPase-like; Haloacid dehalogenase-like hydrolase; E1-E2 ATPase-associated region; magnesium-translocating P-type ATPase complement(946161..948926) Burkholderia cenocepacia AU 1054 4094566 YP_623669.1 CDS Bcen_3804 NC_008061.1 948974 949285 R KEGG: bur:Bcep18194_B1282 hypothetical protein; hypothetical protein complement(948974..949285) Burkholderia cenocepacia AU 1054 4094567 YP_623670.1 CDS Bcen_3805 NC_008061.1 949642 951300 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: bur:Bcep18194_B1283 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(949642..951300) Burkholderia cenocepacia AU 1054 4094568 YP_623671.1 CDS Bcen_3806 NC_008061.1 951722 952618 D PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_B1284 extracellular solute-binding protein, family 3; extracellular solute-binding protein 951722..952618 Burkholderia cenocepacia AU 1054 4094569 YP_623672.1 CDS Bcen_3807 NC_008061.1 952720 953262 R hypothetical protein complement(952720..953262) Burkholderia cenocepacia AU 1054 4094570 YP_623673.1 CDS Bcen_3808 NC_008061.1 953560 954807 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1285 drug resistance transporter Bcr/CflA subfamily; major facilitator transporter 953560..954807 Burkholderia cenocepacia AU 1054 4094571 YP_623674.1 CDS Bcen_3809 NC_008061.1 954827 955348 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1286 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 954827..955348 Burkholderia cenocepacia AU 1054 4094572 YP_623675.1 CDS Bcen_3810 NC_008061.1 955378 956067 R KEGG: bur:Bcep18194_B1287 hypothetical protein; hypothetical protein complement(955378..956067) Burkholderia cenocepacia AU 1054 4094573 YP_623676.1 CDS Bcen_3811 NC_008061.1 956201 956488 R hypothetical protein complement(956201..956488) Burkholderia cenocepacia AU 1054 4094574 YP_623677.1 CDS Bcen_3812 NC_008061.1 956692 958935 R TIGRFAM: Penicillin-binding protein 1C; PFAM: glycosyl transferase, family 51; KEGG: bur:Bcep18194_B1290 penicillin-binding protein 1C; penicillin-binding protein 1C complement(956692..958935) Burkholderia cenocepacia AU 1054 4094575 YP_623678.1 CDS Bcen_3813 NC_008061.1 958946 965056 R PFAM: alpha-2-macroglobulin-like; KEGG: bur:Bcep18194_B1291 alpha-2-macroglobulin-like; alpha-2-macroglobulin-like complement(958946..965056) Burkholderia cenocepacia AU 1054 4094576 YP_623679.1 CDS Bcen_3814 NC_008061.1 965229 965831 D TIGRFAM: Twin-arginine translocation pathway signal; KEGG: bur:Bcep18194_B1292 hypothetical protein; twin-arginine translocation pathway signal 965229..965831 Burkholderia cenocepacia AU 1054 4094577 YP_623680.1 CDS Bcen_3815 NC_008061.1 965831 967450 D PFAM: glucose-methanol-choline oxidoreductase; KEGG: bur:Bcep18194_C6549 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 965831..967450 Burkholderia cenocepacia AU 1054 4094578 YP_623681.1 CDS Bcen_3816 NC_008061.1 967453 968730 D PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_B1294 cytochrome c, class I; cytochrome c, class I 967453..968730 Burkholderia cenocepacia AU 1054 4096273 YP_623682.1 CDS Bcen_3817 NC_008061.1 968904 969323 D PFAM: DoxX; KEGG: bur:Bcep18194_B1295 DoxX family membrane protein; DoxX protein 968904..969323 Burkholderia cenocepacia AU 1054 4096274 YP_623683.1 CDS Bcen_3818 NC_008061.1 969387 970496 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B1296 outer membrane protein (porin); porin 969387..970496 Burkholderia cenocepacia AU 1054 4096275 YP_623684.1 CDS Bcen_3819 NC_008061.1 970760 971302 R PFAM: isochorismatase hydrolase; KEGG: pfl:PFL_2630 isochorismatase family protein; isochorismatase hydrolase complement(970760..971302) Burkholderia cenocepacia AU 1054 4096276 YP_623685.1 CDS Bcen_3820 NC_008061.1 971542 972867 R PFAM: General substrate transporter; KEGG: bur:Bcep18194_B1297 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(971542..972867) Burkholderia cenocepacia AU 1054 4096277 YP_623686.1 CDS Bcen_3821 NC_008061.1 972912 974096 R KEGG: bur:Bcep18194_B1298 peptidase M20D, amidohydrolase TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation; peptidase M20D, amidohydrolase complement(972912..974096) Burkholderia cenocepacia AU 1054 4096278 YP_623687.1 CDS Bcen_3822 NC_008061.1 974278 975180 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1299 transcriptional regulator, LysR family; LysR family transcriptional regulator 974278..975180 Burkholderia cenocepacia AU 1054 4096279 YP_623688.1 CDS Bcen_3823 NC_008061.1 975354 975674 D PFAM: protein of unknown function DUF1255; KEGG: bur:Bcep18194_B1300 protein of unknown function DUF1255; hypothetical protein 975354..975674 Burkholderia cenocepacia AU 1054 4096280 YP_623689.1 CDS Bcen_3824 NC_008061.1 975779 976180 R KEGG: bur:Bcep18194_B1301 hypothetical protein; hypothetical protein complement(975779..976180) Burkholderia cenocepacia AU 1054 4096281 YP_623690.1 CDS Bcen_3825 NC_008061.1 976595 978382 R PFAM: CBS; KEGG: bur:Bcep18194_B1302 Cl-channel, voltage gated; Cl- channel, voltage gated complement(976595..978382) Burkholderia cenocepacia AU 1054 4096282 YP_623691.1 CDS Bcen_3826 NC_008061.1 978415 978891 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B1303 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(978415..978891) Burkholderia cenocepacia AU 1054 4096283 YP_623692.1 CDS Bcen_3827 NC_008061.1 978948 980123 R PFAM: CBS; KEGG: bur:Bcep18194_B1304 CBS domain containing membrane protein; hypothetical protein complement(978948..980123) Burkholderia cenocepacia AU 1054 4096284 YP_623693.1 CDS Bcen_3828 NC_008061.1 980490 981458 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1305 transcriptional regulator, LysR family; LysR family transcriptional regulator 980490..981458 Burkholderia cenocepacia AU 1054 4096285 YP_623694.1 CDS Bcen_3829 NC_008061.1 981484 982848 R TIGRFAM: D-galactonate transporter; PFAM: General substrate transporter; KEGG: bur:Bcep18194_B1306 major facilitator superfamily (MFS_1) transporter; D-galactonate transporter complement(981484..982848) Burkholderia cenocepacia AU 1054 4096286 YP_623695.1 CDS Bcen_3830 NC_008061.1 982913 983917 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: bur:Bcep18194_B1307 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(982913..983917) Burkholderia cenocepacia AU 1054 4096287 YP_623696.1 CDS Bcen_3831 NC_008061.1 983965 984873 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1308 transcriptional regulator, LysR family; LysR family transcriptional regulator 983965..984873 Burkholderia cenocepacia AU 1054 4096288 YP_623697.1 CDS Bcen_3832 NC_008061.1 985156 986187 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bur:Bcep18194_B1309 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter, DctP subunit 985156..986187 Burkholderia cenocepacia AU 1054 4096289 YP_623698.1 CDS Bcen_3833 NC_008061.1 986191 988077 D TIGRFAM: TRAP dicarboxylate transporter- DctM subunit; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: bur:Bcep18194_B1310 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter- DctM subunit 986191..988077 Burkholderia cenocepacia AU 1054 4096290 YP_623699.1 CDS Bcen_3834 NC_008061.1 988086 989171 D PFAM: regulatory protein, LacI; KEGG: bur:Bcep18194_B1311 transcriptional regulator, LacI family; LacI family transcriptional regulator 988086..989171 Burkholderia cenocepacia AU 1054 4096291 YP_623700.1 CDS Bcen_3835 NC_008061.1 989168 990190 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: bur:Bcep18194_B1312 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 989168..990190 Burkholderia cenocepacia AU 1054 4095511 YP_623701.1 CDS Bcen_3836 NC_008061.1 990187 991068 D PFAM: amidohydrolase 2; KEGG: bur:Bcep18194_B1313 amidohydrolase 2; amidohydrolase 2 990187..991068 Burkholderia cenocepacia AU 1054 4095512 YP_623702.1 CDS Bcen_3837 NC_008061.1 991159 992247 R PFAM: sodium/calcium exchanger membrane region; KEGG: bur:Bcep18194_B1316 sodium/calcium exchanger; sodium/calcium exchanger membrane region complement(991159..992247) Burkholderia cenocepacia AU 1054 4095513 YP_623703.1 CDS Bcen_3838 NC_008061.1 992791 994347 D converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxy-acyl-CoA dehydrogenase 992791..994347 Burkholderia cenocepacia AU 1054 4095514 YP_623704.1 CDS Bcen_3839 NC_008061.1 994405 995727 D TIGRFAM: Phenylacetate-CoA ligase; KEGG: bur:Bcep18194_B1318 phenylacetate-CoA ligase; phenylacetate-CoA ligase 994405..995727 Burkholderia cenocepacia AU 1054 4095515 YP_623705.1 CDS Bcen_3840 NC_008061.1 995765 996565 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bur:Bcep18194_B1319 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 995765..996565 Burkholderia cenocepacia AU 1054 4095516 YP_623706.1 CDS Bcen_3841 NC_008061.1 996689 997372 D PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: bur:Bcep18194_B1320 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-like proteins 996689..997372 Burkholderia cenocepacia AU 1054 4095517 YP_623707.1 CDS Bcen_3842 NC_008061.1 997529 998509 D PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B1321 aldo/keto reductase; aldo/keto reductase 997529..998509 Burkholderia cenocepacia AU 1054 4095518 YP_623708.1 CDS Bcen_3843 NC_008061.1 998546 999451 R PFAM: Abortive infection protein; KEGG: bur:Bcep18194_B1322 abortive infection protein; abortive infection protein complement(998546..999451) Burkholderia cenocepacia AU 1054 4095519 YP_623709.1 CDS Bcen_3844 NC_008061.1 999498 1000154 R KEGG: bur:Bcep18194_B1323 hypothetical protein; hypothetical protein complement(999498..1000154) Burkholderia cenocepacia AU 1054 4095520 YP_623710.1 CDS Bcen_3845 NC_008061.1 1000481 1001545 R PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B1325 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase GroES-like protein complement(1000481..1001545) Burkholderia cenocepacia AU 1054 4095521 YP_623711.1 CDS Bcen_3846 NC_008061.1 1001892 1002632 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1326 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1001892..1002632) Burkholderia cenocepacia AU 1054 4095522 YP_623712.1 CDS Bcen_3847 NC_008061.1 1002814 1004052 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1327 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1002814..1004052 Burkholderia cenocepacia AU 1054 4095523 YP_623713.1 CDS Bcen_3848 NC_008061.1 1004094 1004576 D KEGG: bur:Bcep18194_B1328 hypothetical protein; hypothetical protein 1004094..1004576 Burkholderia cenocepacia AU 1054 4095524 YP_623714.1 CDS Bcen_3849 NC_008061.1 1004601 1005845 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1329 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1004601..1005845) Burkholderia cenocepacia AU 1054 4095525 YP_623715.1 CDS Bcen_3850 NC_008061.1 1005903 1007477 D PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B1330 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator 1005903..1007477 Burkholderia cenocepacia AU 1054 4095526 YP_623716.1 CDS Bcen_3851 NC_008061.1 1007697 1009373 D PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: bur:Bcep18194_B1333 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap 1007697..1009373 Burkholderia cenocepacia AU 1054 4095527 YP_623717.1 CDS Bcen_3852 NC_008061.1 1009612 1010823 D TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1334 drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 1009612..1010823 Burkholderia cenocepacia AU 1054 4095528 YP_623718.1 CDS Bcen_3853 NC_008061.1 1010950 1011489 D KEGG: bur:Bcep18194_B1335 hypothetical protein; hypothetical protein 1010950..1011489 Burkholderia cenocepacia AU 1054 4095529 YP_623719.1 CDS Bcen_3854 NC_008061.1 1011546 1012244 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B1336 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase complement(1011546..1012244) Burkholderia cenocepacia AU 1054 4095530 YP_623720.1 CDS Bcen_3855 NC_008061.1 1012362 1013303 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B1337 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1012362..1013303) Burkholderia cenocepacia AU 1054 4095395 YP_623721.1 CDS Bcen_3856 NC_008061.1 1013392 1013991 R PFAM: Uracil-DNA glycosylase superfamily; KEGG: bur:Bcep18194_B1338 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein complement(1013392..1013991) Burkholderia cenocepacia AU 1054 4095396 YP_623722.1 CDS Bcen_3857 NC_008061.1 1014132 1015184 R KEGG: bur:Bcep18194_B1339 ABC-type nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein-like protein complement(1014132..1015184) Burkholderia cenocepacia AU 1054 4095397 YP_623723.1 CDS Bcen_3858 NC_008061.1 1015190 1015849 R PFAM: response regulator receiver; KEGG: bur:Bcep18194_B1340 response regulator receiver (CheY-like) and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein complement(1015190..1015849) Burkholderia cenocepacia AU 1054 4095398 YP_623724.1 CDS Bcen_3859 NC_008061.1 1015907 1016668 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bur:Bcep18194_B1341 uroporphyrin-III C-methyltransferase-like; uroporphyrin-III C-methyltransferase complement(1015907..1016668) Burkholderia cenocepacia AU 1054 4095399 YP_623725.1 CDS Bcen_3860 NC_008061.1 1016868 1017239 R hypothetical protein complement(1016868..1017239) Burkholderia cenocepacia AU 1054 4095400 YP_623726.1 CDS Bcen_3861 NC_008061.1 1017325 1018650 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1343 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1017325..1018650 Burkholderia cenocepacia AU 1054 4095401 YP_623727.1 CDS Bcen_3864 NC_008061.1 1021282 1021626 D TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; PFAM: Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_B1345 nitrite reductase (NAD(P)H), small subunit; nitrite reductase (NAD(P)H) large subunit, NirD 1021282..1021626 Burkholderia cenocepacia AU 1054 4095403 YP_623728.1 CDS Bcen_3865 NC_008061.1 1021643 1025830 D PFAM: oxidoreductase FAD/NAD(P)-binding; KEGG: bur:Bcep18194_B1346 sulfite reductase alpha subunit; molybdopterin oxidoreductase 1021643..1025830 Burkholderia cenocepacia AU 1054 4095404 YP_623729.1 CDS Bcen_3866 NC_008061.1 1025880 1026656 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B1347 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(1025880..1026656) Burkholderia cenocepacia AU 1054 4095405 YP_623730.1 CDS Bcen_3867 NC_008061.1 1026661 1027104 R PFAM: protein of unknown function DUF336; KEGG: bur:Bcep18194_B1348 protein of unknown function DUF336; hypothetical protein complement(1026661..1027104) Burkholderia cenocepacia AU 1054 4095406 YP_623731.1 CDS Bcen_3868 NC_008061.1 1027211 1028131 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1349 transcriptional regulator, LysR family; LysR family transcriptional regulator 1027211..1028131 Burkholderia cenocepacia AU 1054 4095407 YP_623732.1 CDS Bcen_3869 NC_008061.1 1028213 1028653 D KEGG: bur:Bcep18194_B1350 hypothetical protein; hypothetical protein 1028213..1028653 Burkholderia cenocepacia AU 1054 4095408 YP_623733.1 CDS Bcen_3870 NC_008061.1 1028650 1028928 D hypothetical protein 1028650..1028928 Burkholderia cenocepacia AU 1054 4095409 YP_623734.1 CDS Bcen_3871 NC_008061.1 1029006 1031675 D PFAM: protein of unknown function DUF470; KEGG: bur:Bcep18194_B1351 hypothetical protein; hypothetical protein 1029006..1031675 Burkholderia cenocepacia AU 1054 4095410 YP_623735.1 CDS Bcen_3872 NC_008061.1 1031672 1032955 D PFAM: virulence factor; KEGG: bur:Bcep18194_B1352 type IV secretory pathway VirJ component; virulence factor 1031672..1032955 Burkholderia cenocepacia AU 1054 4095411 YP_623736.1 CDS Bcen_3873 NC_008061.1 1033193 1033582 R KEGG: bur:Bcep18194_B1355 hypothetical protein; hypothetical protein complement(1033193..1033582) Burkholderia cenocepacia AU 1054 4095412 YP_623737.1 CDS Bcen_3874 NC_008061.1 1033689 1035122 R PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B1356 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator complement(1033689..1035122) Burkholderia cenocepacia AU 1054 4095413 YP_623738.1 CDS Bcen_3875 NC_008061.1 1035253 1036563 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1357 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1035253..1036563) Burkholderia cenocepacia AU 1054 4095732 YP_623739.1 CDS Bcen_3876 NC_008061.1 1036636 1037691 R catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase complement(1036636..1037691) Burkholderia cenocepacia AU 1054 4095733 YP_623740.1 CDS Bcen_3878 NC_008061.1 1038878 1040008 D PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_B1360 ABC spermidine/putrescine transporter, periplasmic ligand binding protein; extracellular solute-binding protein 1038878..1040008 Burkholderia cenocepacia AU 1054 4095735 YP_623741.1 CDS Bcen_3879 NC_008061.1 1040005 1041777 D TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bur:Bcep18194_B1361 diguanylate cyclase (GGDEF domain); diguanylate cyclase 1040005..1041777 Burkholderia cenocepacia AU 1054 4095736 YP_623742.1 CDS Bcen_3880 NC_008061.1 1041862 1042161 R KEGG: bur:Bcep18194_B1362 hypothetical protein; hypothetical protein complement(1041862..1042161) Burkholderia cenocepacia AU 1054 4095737 YP_623743.1 CDS Bcen_3881 NC_008061.1 1042319 1042819 D KEGG: bur:Bcep18194_B1363 hypothetical protein; hypothetical protein 1042319..1042819 Burkholderia cenocepacia AU 1054 4095738 YP_623744.1 CDS Bcen_3882 NC_008061.1 1043140 1043379 R KEGG: bur:Bcep18194_B1367 protein of unknown function DUF81; hypothetical protein complement(1043140..1043379) Burkholderia cenocepacia AU 1054 4095739 YP_623745.1 CDS Bcen_3883 NC_008061.1 1043414 1044310 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1368 transcriptional regulator, LysR family; LysR family transcriptional regulator 1043414..1044310 Burkholderia cenocepacia AU 1054 4095740 YP_623746.1 CDS Bcen_3884 NC_008061.1 1044414 1045061 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B1369 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 1044414..1045061 Burkholderia cenocepacia AU 1054 4095741 YP_623747.1 CDS Bcen_3885 NC_008061.1 1045132 1046097 R KEGG: bur:Bcep18194_B1370 hypothetical protein; hypothetical protein complement(1045132..1046097) Burkholderia cenocepacia AU 1054 4095742 YP_623748.1 CDS Bcen_3886 NC_008061.1 1046261 1046548 R KEGG: bur:Bcep18194_B1376 hypothetical protein; hypothetical protein complement(1046261..1046548) Burkholderia cenocepacia AU 1054 4095743 YP_623749.1 CDS Bcen_3887 NC_008061.1 1046649 1048535 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B1377 metallophosphoesterase; twin-arginine translocation pathway signal complement(1046649..1048535) Burkholderia cenocepacia AU 1054 4095744 YP_623750.1 CDS Bcen_3888 NC_008061.1 1048654 1048953 D KEGG: bur:Bcep18194_B1378 hypothetical protein; hypothetical protein 1048654..1048953 Burkholderia cenocepacia AU 1054 4095745 YP_623751.2 CDS Bcen_3889 NC_008061.1 1049297 1049974 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1049297..1049974 Burkholderia cenocepacia AU 1054 4095746 YP_623752.1 CDS Bcen_3890 NC_008061.1 1049971 1050390 D KEGG: bur:Bcep18194_B1380 hypothetical protein; hypothetical protein 1049971..1050390 Burkholderia cenocepacia AU 1054 4095747 YP_623753.1 CDS Bcen_3891 NC_008061.1 1050387 1050890 D KEGG: bur:Bcep18194_B1381 integral membrane protein; integral membrane protein 1050387..1050890 Burkholderia cenocepacia AU 1054 4095748 YP_623754.1 CDS Bcen_3892 NC_008061.1 1051119 1052513 D KEGG: bur:Bcep18194_B1384 hypothetical protein; hypothetical protein 1051119..1052513 Burkholderia cenocepacia AU 1054 4095749 YP_623755.1 CDS Bcen_3893 NC_008061.1 1052516 1053673 D TIGRFAM: Twin-arginine translocation pathway signal; PFAM: protein of unknown function DUF1501; KEGG: bur:Bcep18194_B1385 hypothetical protein; twin-arginine translocation pathway signal 1052516..1053673 Burkholderia cenocepacia AU 1054 4095750 YP_623756.1 CDS Bcen_3894 NC_008061.1 1053732 1053950 D KEGG: bur:Bcep18194_B1386 hypothetical protein; hypothetical protein 1053732..1053950 Burkholderia cenocepacia AU 1054 4095751 YP_623757.1 CDS Bcen_3895 NC_008061.1 1054071 1055267 R PFAM: phage integrase; KEGG: bur:Bcep18194_B1405 phage integrase; phage integrase complement(1054071..1055267) Burkholderia cenocepacia AU 1054 4095492 YP_623758.1 CDS Bcen_3896 NC_008061.1 1055563 1055943 D KEGG: bur:Bcep18194_B1408 hypothetical protein; hypothetical protein 1055563..1055943 Burkholderia cenocepacia AU 1054 4095493 YP_623759.1 CDS Bcen_3897 NC_008061.1 1055953 1057437 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1409 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1055953..1057437) Burkholderia cenocepacia AU 1054 4095494 YP_623760.1 CDS Bcen_3898 NC_008061.1 1057713 1058588 R KEGG: bps:BPSL0092 lipoprotein; lipoprotein complement(1057713..1058588) Burkholderia cenocepacia AU 1054 4095495 YP_623761.1 CDS Bcen_3899 NC_008061.1 1058910 1059272 R hypothetical protein complement(1058910..1059272) Burkholderia cenocepacia AU 1054 4095496 YP_623762.1 CDS Bcen_3900 NC_008061.1 1059405 1060229 D KEGG: bur:Bcep18194_B1426 hypothetical protein; hypothetical protein 1059405..1060229 Burkholderia cenocepacia AU 1054 4095497 YP_623763.1 CDS Bcen_3901 NC_008061.1 1060249 1061394 R PFAM: acyltransferase 3; KEGG: pfo:Pfl_0479 acyltransferase 3; acyltransferase 3 complement(1060249..1061394) Burkholderia cenocepacia AU 1054 4095498 YP_623764.1 CDS Bcen_3902 NC_008061.1 1061966 1062202 D KEGG: bur:Bcep18194_B1427 hypothetical protein; hypothetical protein 1061966..1062202 Burkholderia cenocepacia AU 1054 4095499 YP_623765.1 CDS Bcen_3903 NC_008061.1 1062195 1062605 D PFAM: PilT protein-like; KEGG: bur:Bcep18194_B1430 hypothetical protein; PilT protein-like protein 1062195..1062605 Burkholderia cenocepacia AU 1054 4095500 YP_623766.1 CDS Bcen_3904 NC_008061.1 1063019 1063222 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: bur:Bcep18194_B1449 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1063019..1063222 Burkholderia cenocepacia AU 1054 4095501 YP_623767.1 CDS Bcen_3905 NC_008061.1 1063689 1063952 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1063689..1063952 Burkholderia cenocepacia AU 1054 4095502 YP_623768.1 CDS Bcen_3906 NC_008061.1 1064522 1065769 D PFAM: phosphoesterase; KEGG: bur:Bcep18194_B1454 phosphoesterase; phosphoesterase 1064522..1065769 Burkholderia cenocepacia AU 1054 4095503 YP_623769.1 CDS Bcen_3907 NC_008061.1 1065766 1066014 D hypothetical protein 1065766..1066014 Burkholderia cenocepacia AU 1054 4095504 YP_623770.1 CDS Bcen_3908 NC_008061.1 1066464 1066712 D KEGG: bur:Bcep18194_B1468 hypothetical protein; hypothetical protein 1066464..1066712 Burkholderia cenocepacia AU 1054 4095505 YP_623771.1 CDS Bcen_3909 NC_008061.1 1066924 1067223 D KEGG: bur:Bcep18194_B1473 hypothetical protein; hypothetical protein 1066924..1067223 Burkholderia cenocepacia AU 1054 4095506 YP_623772.1 CDS Bcen_3910 NC_008061.1 1067421 1068035 D PFAM: protein of unknown function DUF1326; KEGG: mlo:mlr8146 hypothetical protein; hypothetical protein 1067421..1068035 Burkholderia cenocepacia AU 1054 4095507 YP_623773.1 CDS Bcen_3911 NC_008061.1 1068032 1068823 D KEGG: sme:SMc02859 hypothetical protein; metal-binding integral membrane protein-like 1068032..1068823 Burkholderia cenocepacia AU 1054 4095508 YP_623774.1 CDS Bcen_3912 NC_008061.1 1068877 1069224 D KEGG: bpm:BURPS1710b_0515 hypothetical protein; hypothetical protein 1068877..1069224 Burkholderia cenocepacia AU 1054 4095509 YP_623775.1 CDS Bcen_3913 NC_008061.1 1070026 1070850 D PFAM: Collagen triple helix repeat; KEGG: bur:Bcep18194_B1475 hypothetical protein; triple helix repeat-containing collagen 1070026..1070850 Burkholderia cenocepacia AU 1054 4095510 YP_623776.1 CDS Bcen_3914 NC_008061.1 1070964 1071476 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_B1476 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(1070964..1071476) Burkholderia cenocepacia AU 1054 4095337 YP_623777.1 CDS Bcen_3915 NC_008061.1 1071542 1072174 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B1477 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 1071542..1072174 Burkholderia cenocepacia AU 1054 4095338 YP_623778.1 CDS Bcen_3916 NC_008061.1 1072218 1074146 R PFAM: TonB-dependent receptor; KEGG: bur:Bcep18194_B1485 TonB-dependent receptor; TonB-dependent receptor complement(1072218..1074146) Burkholderia cenocepacia AU 1054 4095339 YP_623779.1 CDS Bcen_3917 NC_008061.1 1074840 1075088 R KEGG: bur:Bcep18194_B1492 hypothetical protein; hypothetical protein complement(1074840..1075088) Burkholderia cenocepacia AU 1054 4095341 YP_623780.1 CDS Bcen_3918 NC_008061.1 1075204 1076178 R catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase complement(1075204..1076178) Burkholderia cenocepacia AU 1054 4095342 YP_623781.1 CDS Bcen_3919 NC_008061.1 1076245 1076883 R PFAM: YheO-like; KEGG: bur:Bcep18194_B1494 hypothetical protein; YheO-like protein complement(1076245..1076883) Burkholderia cenocepacia AU 1054 4095343 YP_623782.1 CDS Bcen_3920 NC_008061.1 1076880 1077404 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bur:Bcep18194_B1495 conserved hypothetical protein, YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(1076880..1077404) Burkholderia cenocepacia AU 1054 4095344 YP_623783.1 CDS Bcen_3921 NC_008061.1 1077802 1079385 D Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 1077802..1079385 Burkholderia cenocepacia AU 1054 4095345 YP_623784.1 CDS Bcen_3922 NC_008061.1 1079995 1081860 D catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 1079995..1081860 Burkholderia cenocepacia AU 1054 4095346 YP_623785.1 CDS Bcen_3923 NC_008061.1 1082081 1083745 R PFAM: phosphoesterase; KEGG: bur:Bcep18194_B1519 phosphoesterase; phosphoesterase complement(1082081..1083745) Burkholderia cenocepacia AU 1054 4095347 YP_623786.1 CDS Bcen_3924 NC_008061.1 1084233 1086209 D KEGG: bur:Bcep18194_B1520 peptidase M41, FtsH TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; SMART: ATPase; ATP-dependent metalloprotease FtsH 1084233..1086209 Burkholderia cenocepacia AU 1054 4095348 YP_623787.1 CDS Bcen_3925 NC_008061.1 1086384 1087790 R KEGG: bur:Bcep18194_B1522 alpha,alpha-trehalose-phosphate synthase (UDP-forming) TIGRFAM: Alpha,alpha-trehalose-phosphate synthase; PFAM: glycosyl transferase, family 20; Alpha,alpha-trehalose-phosphate synthase complement(1086384..1087790) Burkholderia cenocepacia AU 1054 4095349 YP_623788.1 CDS Bcen_3926 NC_008061.1 1088255 1089874 R PFAM: histidine kinase, HAMP region; KEGG: bur:Bcep18194_B1523 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1088255..1089874) Burkholderia cenocepacia AU 1054 4095350 YP_623789.1 CDS Bcen_3927 NC_008061.1 1090348 1092576 R PFAM: TonB-dependent receptor; KEGG: bur:Bcep18194_B1524 TonB-dependent receptor; TonB-dependent receptor complement(1090348..1092576) Burkholderia cenocepacia AU 1054 4095351 YP_623790.1 CDS Bcen_3928 NC_008061.1 1092849 1093877 D PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bte:BTH_II0428 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase GroES-like protein 1092849..1093877 Burkholderia cenocepacia AU 1054 4095352 YP_623791.1 CDS Bcen_3929 NC_008061.1 1093948 1095393 R KEGG: BNR/Asp-box repeat protein; BNR/Asp-box repeat-containing protein complement(1093948..1095393) Burkholderia cenocepacia AU 1054 4095353 YP_623792.1 CDS Bcen_3930 NC_008061.1 1095848 1096279 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B1526 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(1095848..1096279) Burkholderia cenocepacia AU 1054 4095354 YP_623793.1 CDS Bcen_3931 NC_008061.1 1096276 1097193 R KEGG: bur:Bcep18194_B1527 alpha/beta hydrolase-like; alpha/beta hydrolase-like protein complement(1096276..1097193) Burkholderia cenocepacia AU 1054 4095355 YP_623794.1 CDS Bcen_3932 NC_008061.1 1097379 1098428 D TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_B1528 ABC transporter, substrate-binding protein, aliphatic sulphonates; aliphatic sulfonates ABC transporter substrate-binding protein 1097379..1098428 Burkholderia cenocepacia AU 1054 4096234 YP_623795.1 CDS Bcen_3933 NC_008061.1 1098490 1099584 D PFAM: luciferase-like; KEGG: bur:Bcep18194_B1529 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 1098490..1099584 Burkholderia cenocepacia AU 1054 4096235 YP_623796.1 CDS Bcen_3934 NC_008061.1 1099660 1100592 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_B1530 ABC amino acid transporter, periplasmic ligand binding protein; twin-arginine translocation pathway signal complement(1099660..1100592) Burkholderia cenocepacia AU 1054 4096236 YP_623797.1 CDS Bcen_3935 NC_008061.1 1100627 1102420 R KEGG: bur:Bcep18194_B1531 amino acid ABC transporter, inner membrane subunit TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; SMART: ATPase; amino acid ABC transporter permease complement(1100627..1102420) Burkholderia cenocepacia AU 1054 4096237 YP_623798.1 CDS Bcen_3936 NC_008061.1 1102486 1103805 R KEGG: bur:Bcep18194_B1532 flavin-dependent oxidoreductase; flavin-dependent oxidoreductase complement(1102486..1103805) Burkholderia cenocepacia AU 1054 4096238 YP_623799.1 CDS Bcen_3937 NC_008061.1 1103849 1104898 R PFAM: luciferase-like; KEGG: bur:Bcep18194_B1533 flavin-dependent oxidoreductase; luciferase-like protein complement(1103849..1104898) Burkholderia cenocepacia AU 1054 4096239 YP_623800.1 CDS Bcen_3938 NC_008061.1 1104952 1105905 R PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_B1534 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(1104952..1105905) Burkholderia cenocepacia AU 1054 4096240 YP_623801.1 CDS Bcen_3939 NC_008061.1 1105980 1106546 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B1535 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1105980..1106546) Burkholderia cenocepacia AU 1054 4096241 YP_623802.2 CDS rdgC NC_008061.1 1106999 1107922 R Required for efficient pilin antigenic variation; recombination associated protein complement(1106999..1107922) Burkholderia cenocepacia AU 1054 4096242 YP_623803.1 CDS Bcen_3941 NC_008061.1 1108291 1109325 R PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bur:Bcep18194_B1538 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase complement(1108291..1109325) Burkholderia cenocepacia AU 1054 4096243 YP_623804.1 CDS Bcen_3942 NC_008061.1 1109568 1109843 R KEGG: bur:Bcep18194_B1539 hypothetical protein; hypothetical protein complement(1109568..1109843) Burkholderia cenocepacia AU 1054 4096244 YP_623805.1 CDS Bcen_3943 NC_008061.1 1110102 1111589 R TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bur:Bcep18194_B1540 diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(1110102..1111589) Burkholderia cenocepacia AU 1054 4096245 YP_623806.1 CDS Bcen_3944 NC_008061.1 1111657 1112241 R PFAM: transposase, IS605 OrfB; KEGG: noc:Noc_1587 transposase; transposase, IS605 OrfB complement(1111657..1112241) Burkholderia cenocepacia AU 1054 4096246 YP_623807.1 CDS Bcen_3945 NC_008061.1 1112331 1112579 D hypothetical protein 1112331..1112579 Burkholderia cenocepacia AU 1054 4096247 YP_623808.1 CDS Bcen_3946 NC_008061.1 1112672 1115551 D TIGRFAM: Twin-arginine translocation pathway signal; PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bur:Bcep18194_B1541 aldehyde oxidase; twin-arginine translocation pathway signal 1112672..1115551 Burkholderia cenocepacia AU 1054 4096248 YP_623809.1 CDS Bcen_3947 NC_008061.1 1115548 1116243 D PFAM: ferredoxin; KEGG: bur:Bcep18194_B1542 (2Fe-2S)-binding protein; (2Fe-2S)-binding 1115548..1116243 Burkholderia cenocepacia AU 1054 4096249 YP_623810.1 CDS Bcen_3948 NC_008061.1 1116240 1117499 D PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_B1543 cytochrome c, class I; cytochrome c, class I 1116240..1117499 Burkholderia cenocepacia AU 1054 4096250 YP_623811.1 CDS Bcen_3949 NC_008061.1 1117883 1118374 R PFAM: OmpA/MotB; KEGG: bur:Bcep18194_B1545 outer membrane protein, OmpA/MotB family; OmpA/MotB complement(1117883..1118374) Burkholderia cenocepacia AU 1054 4096251 YP_623812.1 CDS Bcen_3950 NC_008061.1 1118792 1120003 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B1546 outer membrane protein (porin); porin complement(1118792..1120003) Burkholderia cenocepacia AU 1054 4096252 YP_623813.1 CDS Bcen_3951 NC_008061.1 1120375 1120803 R KEGG: bur:Bcep18194_B1547 hypothetical protein; hypothetical protein complement(1120375..1120803) Burkholderia cenocepacia AU 1054 4096253 YP_623814.1 CDS Bcen_3952 NC_008061.1 1120848 1121168 R KEGG: bur:Bcep18194_B1548 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1120848..1121168) Burkholderia cenocepacia AU 1054 4095849 YP_623815.1 CDS Bcen_3953 NC_008061.1 1121449 1122405 D KEGG: bur:Bcep18194_C6807 hypothetical protein; hypothetical protein 1121449..1122405 Burkholderia cenocepacia AU 1054 4095850 YP_623816.1 CDS Bcen_3954 NC_008061.1 1122658 1123236 R TIGRFAM: Twin-arginine translocation pathway signal; KEGG: dar:Daro_1059 probable transmembrane protein; twin-arginine translocation pathway signal complement(1122658..1123236) Burkholderia cenocepacia AU 1054 4095851 YP_623817.1 CDS Bcen_3955 NC_008061.1 1123798 1124019 R hypothetical protein complement(1123798..1124019) Burkholderia cenocepacia AU 1054 4095852 YP_623818.1 CDS Bcen_3956 NC_008061.1 1124053 1124493 D hypothetical protein 1124053..1124493 Burkholderia cenocepacia AU 1054 4095853 YP_623819.1 CDS Bcen_3957 NC_008061.1 1124632 1125642 D PFAM: Patatin; KEGG: patatin-like phospholipase; patatin 1124632..1125642 Burkholderia cenocepacia AU 1054 4095854 YP_623820.1 CDS Bcen_3958 NC_008061.1 1125821 1127266 R PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B1600 succinate-semialdehyde dehydrogenase (NAD(P)+); succinate-semialdehyde dehydrogenase (NAD(P)+) complement(1125821..1127266) Burkholderia cenocepacia AU 1054 4095855 YP_623821.1 CDS Bcen_3959 NC_008061.1 1127426 1128730 R PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_B1601 cytochrome c, class I; cytochrome c, class I complement(1127426..1128730) Burkholderia cenocepacia AU 1054 4095856 YP_623822.1 CDS Bcen_3960 NC_008061.1 1128746 1130965 R KEGG: bur:Bcep18194_B1602 aldehyde oxidase TIGRFAM: Twin-arginine translocation pathway signal; PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; twin-arginine translocation pathway signal complement(1128746..1130965) Burkholderia cenocepacia AU 1054 4095857 YP_623823.1 CDS Bcen_3961 NC_008061.1 1130967 1131422 R PFAM: ferredoxin; KEGG: bur:Bcep18194_B1603 (2Fe-2S)-binding protein; (2Fe-2S)-binding protein complement(1130967..1131422) Burkholderia cenocepacia AU 1054 4095858 YP_623824.1 CDS Bcen_3962 NC_008061.1 1131573 1131872 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bur:Bcep18194_B1604 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(1131573..1131872) Burkholderia cenocepacia AU 1054 4095859 YP_623825.1 CDS Bcen_3963 NC_008061.1 1131965 1133023 R PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B1605 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase complement(1131965..1133023) Burkholderia cenocepacia AU 1054 4095860 YP_623826.1 CDS Bcen_3964 NC_008061.1 1133272 1133892 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B1606 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1133272..1133892) Burkholderia cenocepacia AU 1054 4095861 YP_623827.1 CDS Bcen_3965 NC_008061.1 1134062 1135081 R KEGG: bur:Bcep18194_B1608 hypothetical protein; hypothetical protein complement(1134062..1135081) Burkholderia cenocepacia AU 1054 4095862 YP_623828.1 CDS Bcen_3966 NC_008061.1 1135496 1135777 D hypothetical protein 1135496..1135777 Burkholderia cenocepacia AU 1054 4095863 YP_623829.1 CDS Bcen_3967 NC_008061.1 1135752 1136672 R PFAM: alpha/beta hydrolase fold; KEGG: bja:blr8188 dehalogenase; alpha/beta hydrolase complement(1135752..1136672) Burkholderia cenocepacia AU 1054 4095864 YP_623830.1 CDS Bcen_3968 NC_008061.1 1136679 1137275 R KEGG: pae:PA3436 hypothetical protein; hypothetical protein complement(1136679..1137275) Burkholderia cenocepacia AU 1054 4095865 YP_623831.1 CDS Bcen_3969 NC_008061.1 1137679 1138344 D PFAM: cation efflux protein; KEGG: bur:Bcep18194_B1618 cation efflux protein; cation efflux protein 1137679..1138344 Burkholderia cenocepacia AU 1054 4095866 YP_623832.1 CDS Bcen_3970 NC_008061.1 1138797 1139204 D PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_B1622 transcriptional regulator, XRE family; XRE family transcriptional regulator 1138797..1139204 Burkholderia cenocepacia AU 1054 4095867 YP_623833.1 CDS Bcen_3971 NC_008061.1 1139207 1140547 D PFAM: HipA-like-like; KEGG: bur:Bcep18194_B1623 uncharacterized protein related to capsule biosynthesis enzymes-like; HipA-like protein 1139207..1140547 Burkholderia cenocepacia AU 1054 4094487 YP_623834.1 CDS Bcen_3972 NC_008061.1 1140706 1141833 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B1625 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase complement(1140706..1141833) Burkholderia cenocepacia AU 1054 4094488 YP_623835.1 CDS Bcen_3973 NC_008061.1 1142191 1143498 D TIGRFAM: metabolite; PFAM: General substrate transporter; KEGG: bur:Bcep18194_B1626 citrate-proton symport; shikimate transporter 1142191..1143498 Burkholderia cenocepacia AU 1054 4094489 YP_623836.1 CDS Bcen_3974 NC_008061.1 1143667 1145004 D KEGG: bur:Bcep18194_B1627 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1143667..1145004 Burkholderia cenocepacia AU 1054 4094490 YP_623837.1 CDS Bcen_3975 NC_008061.1 1145201 1145728 R hypothetical protein complement(1145201..1145728) Burkholderia cenocepacia AU 1054 4094491 YP_623838.1 CDS Bcen_3976 NC_008061.1 1145780 1146013 R PFAM: SpoVT/AbrB-like; KEGG: xac:XAC2188 cell growth regulatory protein; transcriptional regulator/antitoxin MazE complement(1145780..1146013) Burkholderia cenocepacia AU 1054 4094492 YP_623839.1 CDS Bcen_3977 NC_008061.1 1146164 1146937 D PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_B1629 transcriptional regulator, IclR family; IclR family transcriptional regulator 1146164..1146937 Burkholderia cenocepacia AU 1054 4094493 YP_623840.1 CDS Bcen_3978 NC_008061.1 1146953 1149253 R SMART: Helicase c2; KEGG: bur:Bcep18194_B1630 Rad3-related DNA helicases-like; helicase c2 complement(1146953..1149253) Burkholderia cenocepacia AU 1054 4094494 YP_623841.1 CDS Bcen_3979 NC_008061.1 1149250 1150944 R KEGG: bur:Bcep18194_B1631 hypothetical protein; hypothetical protein complement(1149250..1150944) Burkholderia cenocepacia AU 1054 4094495 YP_623842.1 CDS Bcen_3980 NC_008061.1 1151041 1151943 R PFAM: MltA-interacting MipA; KEGG: bur:Bcep18194_B1632 outer membrane protein; MltA-interacting MipA complement(1151041..1151943) Burkholderia cenocepacia AU 1054 4094496 YP_623843.1 CDS Bcen_3981 NC_008061.1 1152125 1152649 R KEGG: bur:Bcep18194_B1633 hypothetical protein; hypothetical protein complement(1152125..1152649) Burkholderia cenocepacia AU 1054 4094497 YP_623844.1 CDS Bcen_3982 NC_008061.1 1152745 1153044 R KEGG: bur:Bcep18194_B1635 hypothetical protein; hypothetical protein complement(1152745..1153044) Burkholderia cenocepacia AU 1054 4094498 YP_623845.1 CDS Bcen_3983 NC_008061.1 1153184 1153432 D KEGG: bur:Bcep18194_B1636 hypothetical protein; hypothetical protein 1153184..1153432 Burkholderia cenocepacia AU 1054 4094499 YP_623846.1 CDS Bcen_3984 NC_008061.1 1153423 1153671 R hypothetical protein complement(1153423..1153671) Burkholderia cenocepacia AU 1054 4094500 YP_623847.1 CDS Bcen_3985 NC_008061.1 1153768 1154199 D PFAM: CBS; KEGG: bur:Bcep18194_B1637 CBS domain containing membrane protein; hypothetical protein 1153768..1154199 Burkholderia cenocepacia AU 1054 4094501 YP_623848.1 CDS Bcen_3986 NC_008061.1 1154307 1154798 D PFAM: PRC-barrel; KEGG: bur:Bcep18194_B1638 hypothetical protein; PRC-barrel protein 1154307..1154798 Burkholderia cenocepacia AU 1054 4094502 YP_623849.1 CDS Bcen_3987 NC_008061.1 1154821 1155459 R KEGG: bur:Bcep18194_B1639 hypothetical protein; hypothetical protein complement(1154821..1155459) Burkholderia cenocepacia AU 1054 4094503 YP_623850.1 CDS Bcen_3988 NC_008061.1 1155509 1156054 R KEGG: hypothetical protein; hypothetical protein complement(1155509..1156054) Burkholderia cenocepacia AU 1054 4094504 YP_623851.1 CDS Bcen_3989 NC_008061.1 1156134 1156544 R PFAM: transport-associated; KEGG: osmY1; osmotically inducible protein Y; transport-associated complement(1156134..1156544) Burkholderia cenocepacia AU 1054 4094505 YP_623852.1 CDS Bcen_3990 NC_008061.1 1156602 1158602 R PFAM: response regulator receiver; SMART: PAS; KEGG: bur:Bcep18194_B1640 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase complement(1156602..1158602) Burkholderia cenocepacia AU 1054 4094506 YP_623853.1 CDS Bcen_3991 NC_008061.1 1158998 1160038 D PFAM: sigma-54 factor, interaction region; SMART: ATPase; KEGG: bur:Bcep18194_B1641 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 1158998..1160038 Burkholderia cenocepacia AU 1054 4096254 YP_623854.1 CDS Bcen_3992 NC_008061.1 1160082 1161881 R PFAM: histidine kinase, HAMP region; KEGG: bur:Bcep18194_B1642 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1160082..1161881) Burkholderia cenocepacia AU 1054 4096255 YP_623855.1 CDS Bcen_3993 NC_008061.1 1162083 1162337 R KEGG: bur:Bcep18194_B1643 hypothetical protein; hypothetical protein complement(1162083..1162337) Burkholderia cenocepacia AU 1054 4096256 YP_623856.1 CDS Bcen_3994 NC_008061.1 1162893 1163327 D KEGG: bur:Bcep18194_B1644 hypothetical protein; hypothetical protein 1162893..1163327 Burkholderia cenocepacia AU 1054 4096257 YP_623857.1 CDS Bcen_3995 NC_008061.1 1163804 1164739 R PFAM: UspA; KEGG: bur:Bcep18194_B1645 universal stress protein UspA family; hypothetical protein complement(1163804..1164739) Burkholderia cenocepacia AU 1054 4096258 YP_623858.1 CDS Bcen_3996 NC_008061.1 1164956 1166338 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1646 amino acid transporter; amino acid permease complement(1164956..1166338) Burkholderia cenocepacia AU 1054 4096259 YP_623859.1 CDS Bcen_3997 NC_008061.1 1166373 1166615 R hypothetical protein complement(1166373..1166615) Burkholderia cenocepacia AU 1054 4096260 YP_623860.1 CDS Bcen_3998 NC_008061.1 1166783 1167829 R KEGG: bur:Bcep18194_B1648 uncharacterized membrane-associated protein; membrane-associated protein complement(1166783..1167829) Burkholderia cenocepacia AU 1054 4096261 YP_623861.1 CDS Bcen_3999 NC_008061.1 1167994 1168500 R PFAM: protein of unknown function DUF985; KEGG: bur:Bcep18194_B1649 protein of unknown function DUF985; hypothetical protein complement(1167994..1168500) Burkholderia cenocepacia AU 1054 4096262 YP_623862.1 CDS Bcen_4000 NC_008061.1 1168836 1169306 R PFAM: UspA; KEGG: bur:Bcep18194_B1650 universal stress protein, UspA family; hypothetical protein complement(1168836..1169306) Burkholderia cenocepacia AU 1054 4096263 YP_623863.1 CDS Bcen_4001 NC_008061.1 1169624 1171726 D PFAM: ATP-binding region, ATPase-like; SMART: PAS; KEGG: bur:Bcep18194_B1651 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 1169624..1171726 Burkholderia cenocepacia AU 1054 4096264 YP_623864.1 CDS Bcen_4002 NC_008061.1 1171723 1172370 D PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B1652 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1171723..1172370 Burkholderia cenocepacia AU 1054 4096265 YP_623865.1 CDS Bcen_4003 NC_008061.1 1172483 1172887 R PFAM: protein of unknown function DUF1311; KEGG: bur:Bcep18194_B1653 protein of unknown function DUF1311; hypothetical protein complement(1172483..1172887) Burkholderia cenocepacia AU 1054 4096266 YP_623866.1 CDS Bcen_4004 NC_008061.1 1173247 1173576 R KEGG: bur:Bcep18194_B1657 hypothetical protein; hypothetical protein complement(1173247..1173576) Burkholderia cenocepacia AU 1054 4096267 YP_623867.1 CDS Bcen_4005 NC_008061.1 1173800 1174714 R PFAM: type IV pilus assembly PilZ; KEGG: bur:Bcep18194_B1658 hypothetical protein; type IV pilus assembly PilZ complement(1173800..1174714) Burkholderia cenocepacia AU 1054 4096268 YP_623868.1 CDS Bcen_4006 NC_008061.1 1174755 1177328 R PFAM: glycosyl transferase, family 51; KEGG: bur:Bcep18194_B1659 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase complement(1174755..1177328) Burkholderia cenocepacia AU 1054 4096269 YP_623869.1 CDS Bcen_4007 NC_008061.1 1177524 1178531 R PFAM: proline racemase; KEGG: bur:Bcep18194_B1660 proline racemase; proline racemase complement(1177524..1178531) Burkholderia cenocepacia AU 1054 4096270 YP_623870.1 CDS Bcen_4008 NC_008061.1 1178609 1179730 R PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B1661 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor complement(1178609..1179730) Burkholderia cenocepacia AU 1054 4096271 YP_623871.1 CDS Bcen_4009 NC_008061.1 1179858 1180595 R PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B1662 transcriptional regulator, GntR family; regulatory protein GntR complement(1179858..1180595) Burkholderia cenocepacia AU 1054 4096272 YP_623872.1 CDS Bcen_4010 NC_008061.1 1180817 1181794 D catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 1180817..1181794 Burkholderia cenocepacia AU 1054 4096194 YP_623873.1 CDS Bcen_4011 NC_008061.1 1181968 1182378 D PFAM: response regulator receiver; KEGG: bur:Bcep18194_B1664 response regulator receiver domain protein (CheY-like); response regulator receiver protein 1181968..1182378 Burkholderia cenocepacia AU 1054 4096195 YP_623874.1 CDS Bcen_4012 NC_008061.1 1182395 1183174 D PFAM: cyclic nucleotide-binding; KEGG: bur:Bcep18194_B1665 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 1182395..1183174 Burkholderia cenocepacia AU 1054 4096196 YP_623875.1 CDS Bcen_4013 NC_008061.1 1183209 1183559 R KEGG: bur:Bcep18194_B1666 hypothetical protein; hypothetical protein complement(1183209..1183559) Burkholderia cenocepacia AU 1054 4096197 YP_623876.1 CDS Bcen_4014 NC_008061.1 1183713 1183952 R KEGG: bur:Bcep18194_B1667 hypothetical protein; hypothetical protein complement(1183713..1183952) Burkholderia cenocepacia AU 1054 4096198 YP_623877.1 CDS Bcen_4015 NC_008061.1 1183969 1184259 R KEGG: bur:Bcep18194_B1668 hypothetical protein; hypothetical protein complement(1183969..1184259) Burkholderia cenocepacia AU 1054 4096199 YP_623878.1 CDS Bcen_4016 NC_008061.1 1184371 1184769 R KEGG: bur:Bcep18194_B1669 hypothetical protein; hypothetical protein complement(1184371..1184769) Burkholderia cenocepacia AU 1054 4096200 YP_623879.1 CDS Bcen_4017 NC_008061.1 1184937 1186139 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(1184937..1186139) Burkholderia cenocepacia AU 1054 4096201 YP_623880.1 CDS Bcen_4018 NC_008061.1 1186186 1187571 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1671 amino acid transporter; amino acid permease complement(1186186..1187571) Burkholderia cenocepacia AU 1054 4096202 YP_623881.1 CDS Bcen_4019 NC_008061.1 1187897 1188370 D PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_B1672 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1187897..1188370 Burkholderia cenocepacia AU 1054 4096203 YP_623882.1 CDS Bcen_4020 NC_008061.1 1188398 1189255 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_B1673 protein of unknown function DUF6, transmembrane; hypothetical protein complement(1188398..1189255) Burkholderia cenocepacia AU 1054 4096204 YP_623883.1 CDS Bcen_4021 NC_008061.1 1189657 1191330 D PFAM: phosphoesterase; KEGG: bur:Bcep18194_B1674 phospholipase C; phospholipase C 1189657..1191330 Burkholderia cenocepacia AU 1054 4096205 YP_623884.1 CDS Bcen_4022 NC_008061.1 1191425 1192846 D PFAM: Di-haem cytochrome c peroxidase; KEGG: bur:Bcep18194_B1675 di-haem cytochrome c peroxidase; di-heme cytochrome c peroxidase 1191425..1192846 Burkholderia cenocepacia AU 1054 4096206 YP_623885.1 CDS Bcen_4023 NC_008061.1 1192871 1193611 R PFAM: Methyltransferase type 11; KEGG: bur:Bcep18194_B1676 methylase involved in ubiquinone/menaquinone biosynthesis-like; methyltransferase type 11 complement(1192871..1193611) Burkholderia cenocepacia AU 1054 4096207 YP_623886.1 CDS Bcen_4024 NC_008061.1 1193690 1195000 R PFAM: FAD dependent oxidoreductase; KEGG: pfl:PFL_2285 oxidoreductase, FAD-binding; FAD dependent oxidoreductase complement(1193690..1195000) Burkholderia cenocepacia AU 1054 4096208 YP_623887.1 CDS Bcen_4025 NC_008061.1 1194997 1195752 R PFAM: ABC transporter related; SMART: ATPase; KEGG: pfl:PFL_2284 amino acid ABC transporter, ATP-binding protein; ABC transporter complement(1194997..1195752) Burkholderia cenocepacia AU 1054 4096209 YP_623888.1 CDS Bcen_4026 NC_008061.1 1195749 1196405 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_2283 amino acid ABC transporter, permease protein; amino acid ABC transporter permease complement(1195749..1196405) Burkholderia cenocepacia AU 1054 4096210 YP_623889.1 CDS Bcen_4027 NC_008061.1 1196494 1197270 R PFAM: extracellular solute-binding protein, family 3; KEGG: rso:RSc3410 probable amino acid-binding periplasmic (pbp) ABC transporter protein; extracellular solute-binding protein complement(1196494..1197270) Burkholderia cenocepacia AU 1054 4096211 YP_623890.1 CDS Bcen_4028 NC_008061.1 1197431 1198222 D PFAM: regulatory proteins, IclR; KEGG: rso:RSc3411 probable transcription regulator protein; IclR family transcriptional regulator 1197431..1198222 Burkholderia cenocepacia AU 1054 4096212 YP_623891.1 CDS Bcen_4029 NC_008061.1 1198277 1198729 R KEGG: psb:Psyr_4042 hypothetical protein; hypothetical protein complement(1198277..1198729) Burkholderia cenocepacia AU 1054 4096213 YP_623892.1 CDS Bcen_4030 NC_008061.1 1198726 1199226 R KEGG: psb:Psyr_4040 cytoplasmic protein; hypothetical protein complement(1198726..1199226) Burkholderia cenocepacia AU 1054 4096136 YP_623893.1 CDS Bcen_4031 NC_008061.1 1199513 1200223 D PFAM: regulatory protein GntR, HTH; KEGG: atrA; transcriptional regulator, GntR family; GntR family transcriptional regulator 1199513..1200223 Burkholderia cenocepacia AU 1054 4096137 YP_623894.1 CDS Bcen_4032 NC_008061.1 1200297 1201103 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: oxidoreductase, short-chain dehydrogenase/reductase family; short chain dehydrogenase 1200297..1201103 Burkholderia cenocepacia AU 1054 4096138 YP_623895.1 CDS Bcen_4033 NC_008061.1 1201139 1202071 D PFAM: protein of unknown function DUF849; KEGG: bps:BPSS0763 hypothetical protein; hypothetical protein 1201139..1202071 Burkholderia cenocepacia AU 1054 4096139 YP_623896.1 CDS Bcen_4034 NC_008061.1 1202294 1203622 D PFAM: major facilitator superfamily MFS_1; KEGG: membrane protein; major facilitator transporter 1202294..1203622 Burkholderia cenocepacia AU 1054 4096140 YP_623897.1 CDS Bcen_4035 NC_008061.1 1203775 1205034 R PFAM: HipA-like-like; KEGG: psb:Psyr_2924 hypothetical protein; HipA-like protein complement(1203775..1205034) Burkholderia cenocepacia AU 1054 4096141 YP_623898.1 CDS Bcen_4036 NC_008061.1 1205031 1205345 R PFAM: helix-turn-helix motif; KEGG: psb:Psyr_2925 helix-turn-helix motif; XRE family plasmid maintenance system antidote protein complement(1205031..1205345) Burkholderia cenocepacia AU 1054 4096142 YP_623899.1 CDS Bcen_4037 NC_008061.1 1205598 1206932 R PFAM: Cl- channel, voltage gated; KEGG: bur:Bcep18194_B1678 Cl-channel, voltage gated; Cl- channel, voltage gated complement(1205598..1206932) Burkholderia cenocepacia AU 1054 4096143 YP_623900.1 CDS Bcen_4038 NC_008061.1 1207098 1208339 R PFAM: Amidohydrolase 3; KEGG: codA; cytosine deaminase; N-isopropylammelide isopropylaminohydrolase complement(1207098..1208339) Burkholderia cenocepacia AU 1054 4096144 YP_623901.1 CDS Bcen_4039 NC_008061.1 1208679 1209818 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B1679 outer membrane protein (porin); porin 1208679..1209818 Burkholderia cenocepacia AU 1054 4096145 YP_623902.1 CDS Bcen_4040 NC_008061.1 1210041 1210343 D KEGG: bur:Bcep18194_B1680 hypothetical protein; hypothetical protein 1210041..1210343 Burkholderia cenocepacia AU 1054 4096146 YP_623903.1 CDS Bcen_4041 NC_008061.1 1210454 1211401 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1681 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1210454..1211401) Burkholderia cenocepacia AU 1054 4096147 YP_623904.1 CDS Bcen_4042 NC_008061.1 1211601 1213784 D PFAM: Fusaric acid resistance protein conserved region; KEGG: bur:Bcep18194_B1682 fusaric acid resistance protein; fusaric acid resistance protein region 1211601..1213784 Burkholderia cenocepacia AU 1054 4096148 YP_623905.1 CDS Bcen_4043 NC_008061.1 1213922 1214134 D KEGG: bur:Bcep18194_B1683 hypothetical protein; hypothetical protein 1213922..1214134 Burkholderia cenocepacia AU 1054 4096149 YP_623906.1 CDS Bcen_4044 NC_008061.1 1214291 1215400 R PFAM: peptidase S58, DmpA; KEGG: bur:Bcep18194_B1684 peptidase S58, DmpA; peptidase S58, DmpA complement(1214291..1215400) Burkholderia cenocepacia AU 1054 4096150 YP_623907.1 CDS Bcen_4045 NC_008061.1 1215464 1216870 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1685 amino acid transporter; amino acid permease complement(1215464..1216870) Burkholderia cenocepacia AU 1054 4096151 YP_623908.1 CDS Bcen_4046 NC_008061.1 1217003 1217803 D PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B1686 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1217003..1217803 Burkholderia cenocepacia AU 1054 4096152 YP_623909.1 CDS Bcen_4047 NC_008061.1 1217828 1218205 R KEGG: bja:bll7164 hypothetical protein; hypothetical protein complement(1217828..1218205) Burkholderia cenocepacia AU 1054 4096153 YP_623910.1 CDS Bcen_4048 NC_008061.1 1218509 1219465 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1693 transcriptional regulator, LysR family; LysR family transcriptional regulator 1218509..1219465 Burkholderia cenocepacia AU 1054 4096154 YP_623911.1 CDS Bcen_4049 NC_008061.1 1219561 1220571 D PFAM: Auxin Efflux Carrier; KEGG: bur:Bcep18194_B1694 auxin efflux carrier; auxin efflux carrier 1219561..1220571 Burkholderia cenocepacia AU 1054 4096063 YP_623912.1 CDS Bcen_4050 NC_008061.1 1220699 1221631 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_B1695 protein of unknown function DUF6, transmembrane; hypothetical protein 1220699..1221631 Burkholderia cenocepacia AU 1054 4096064 YP_623913.1 CDS Bcen_4051 NC_008061.1 1221913 1222287 D PFAM: Secreted repeat of unknown function; KEGG: bur:Bcep18194_B1696 secreted conserved hypothetical protein; hypothetical protein 1221913..1222287 Burkholderia cenocepacia AU 1054 4096065 YP_623914.1 CDS Bcen_4052 NC_008061.1 1222414 1223985 R TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B1697 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase complement(1222414..1223985) Burkholderia cenocepacia AU 1054 4096066 YP_623915.1 CDS Bcen_4053 NC_008061.1 1223982 1225337 R catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase complement(1223982..1225337) Burkholderia cenocepacia AU 1054 4096067 YP_623916.1 CDS Bcen_4054 NC_008061.1 1225443 1226393 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1699 transcriptional regulator, LysR family; LysR family transcriptional regulator 1225443..1226393 Burkholderia cenocepacia AU 1054 4096068 YP_623917.1 CDS Bcen_4055 NC_008061.1 1226418 1227659 R PFAM: protein of unknown function DUF894, DitE; KEGG: bur:Bcep18194_B1700 hypothetical protein; major facilitator transporter complement(1226418..1227659) Burkholderia cenocepacia AU 1054 4096069 YP_623918.1 CDS Bcen_4056 NC_008061.1 1227656 1227991 R KEGG: bur:Bcep18194_B1701 hypothetical protein; hypothetical protein complement(1227656..1227991) Burkholderia cenocepacia AU 1054 4096070 YP_623919.1 CDS Bcen_4057 NC_008061.1 1228029 1228517 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B1702 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(1228029..1228517) Burkholderia cenocepacia AU 1054 4096071 YP_623920.1 CDS Bcen_4058 NC_008061.1 1228668 1229159 D PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_B1703 hypothetical protein; cupin 1228668..1229159 Burkholderia cenocepacia AU 1054 4096072 YP_623921.1 CDS Bcen_4059 NC_008061.1 1229267 1230415 R PFAM: Epoxide hydrolase-like; KEGG: bur:Bcep18194_B1704 epoxide hydrolase-like; epoxide hydrolase-like protein complement(1229267..1230415) Burkholderia cenocepacia AU 1054 4096073 YP_623922.1 CDS Bcen_4060 NC_008061.1 1230494 1231459 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B1705 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1230494..1231459) Burkholderia cenocepacia AU 1054 4096074 YP_623923.1 CDS Bcen_4061 NC_008061.1 1231556 1232401 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B1706 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1231556..1232401 Burkholderia cenocepacia AU 1054 4096075 YP_623924.1 CDS Bcen_4062 NC_008061.1 1232398 1233768 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1710 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1232398..1233768) Burkholderia cenocepacia AU 1054 4096076 YP_623925.1 CDS Bcen_4063 NC_008061.1 1233955 1234914 R PFAM: beta-lactamase-like; KEGG: bur:Bcep18194_B1711 beta-lactamase-like; beta-lactamase-like protein complement(1233955..1234914) Burkholderia cenocepacia AU 1054 4096077 YP_623926.1 CDS Bcen_4064 NC_008061.1 1235093 1236748 D PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_B1712 transcriptional regulator, IclR family; IclR family transcriptional regulator 1235093..1236748 Burkholderia cenocepacia AU 1054 4096078 YP_623927.1 CDS Bcen_4065 NC_008061.1 1236966 1237190 R hypothetical protein complement(1236966..1237190) Burkholderia cenocepacia AU 1054 4096079 YP_623928.1 CDS Bcen_4066 NC_008061.1 1237547 1238029 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_B1713 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(1237547..1238029) Burkholderia cenocepacia AU 1054 4096080 YP_623929.1 CDS Bcen_4067 NC_008061.1 1238314 1238970 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B1714 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 1238314..1238970 Burkholderia cenocepacia AU 1054 4096081 YP_623930.1 CDS Bcen_4068 NC_008061.1 1239093 1240268 D PFAM: TrkA-N; KEGG: bur:Bcep18194_B1715 TrkA-N, potassium channel protein; voltage-gated potassium channel 1239093..1240268 Burkholderia cenocepacia AU 1054 4096082 YP_623931.1 CDS Bcen_4069 NC_008061.1 1240330 1240761 D KEGG: bur:Bcep18194_B1716 membrane protein-like; membrane protein-like 1240330..1240761 Burkholderia cenocepacia AU 1054 4095810 YP_623932.1 CDS Bcen_4070 NC_008061.1 1240900 1242882 D PFAM: histidine kinase, HAMP region; KEGG: tar; methyl-accepting chemotaxis protein II; methyl-accepting chemotaxis sensory transducer 1240900..1242882 Burkholderia cenocepacia AU 1054 4095811 YP_623933.1 CDS Bcen_4071 NC_008061.1 1242924 1244576 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(1242924..1244576) Burkholderia cenocepacia AU 1054 4095812 YP_623934.1 CDS Bcen_4072 NC_008061.1 1244745 1245488 D PFAM: cyclic nucleotide-binding; KEGG: bur:Bcep18194_B1725 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein 1244745..1245488 Burkholderia cenocepacia AU 1054 4095813 YP_623935.1 CDS Bcen_4073 NC_008061.1 1245673 1248840 D PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_B1726 acriflavin resistance protein; acriflavin resistance protein 1245673..1248840 Burkholderia cenocepacia AU 1054 4095814 YP_623936.1 CDS Bcen_4074 NC_008061.1 1248928 1250106 D PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_B1727 secretion protein, HlyD family; secretion protein HlyD 1248928..1250106 Burkholderia cenocepacia AU 1054 4095815 YP_623937.1 CDS Bcen_4075 NC_008061.1 1250112 1251623 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B1728 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT 1250112..1251623 Burkholderia cenocepacia AU 1054 4095816 YP_623938.1 CDS Bcen_4076 NC_008061.1 1251657 1252352 D TIGRFAM: Heavy metal response regulator; PFAM: response regulator receiver; KEGG: bur:Bcep18194_B1729 two component heavy metal response transcriptional regulator, winged helix family; two component heavy metal response transcriptional regulator 1251657..1252352 Burkholderia cenocepacia AU 1054 4095817 YP_623939.1 CDS Bcen_4077 NC_008061.1 1252349 1253833 D TIGRFAM: Heavy metal sensor kinase; PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_B1730 heavy metal sensor signal transduction histidine kinase; heavy metal sensor signal transduction histidine kinase 1252349..1253833 Burkholderia cenocepacia AU 1054 4095818 YP_623940.1 CDS Bcen_4078 NC_008061.1 1253910 1254950 R PFAM: helix-turn-helix, AraC type; KEGG: psb:Psyr_0008 helix-turn-helix, AraC type; AraC family transcriptional regulator complement(1253910..1254950) Burkholderia cenocepacia AU 1054 4095819 YP_623941.1 CDS Bcen_4079 NC_008061.1 1255095 1256621 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(1255095..1256621) Burkholderia cenocepacia AU 1054 4095820 YP_623942.1 CDS Bcen_4080 NC_008061.1 1256677 1257735 R KEGG: aci:ACIAD1620 phenylacetaldoxime dehydratase; phenylacetaldoxime dehydratase complement(1256677..1257735) Burkholderia cenocepacia AU 1054 4095821 YP_623943.1 CDS Bcen_4081 NC_008061.1 1257832 1258728 R KEGG: aci:ACIAD1619 hypothetical protein; hypothetical protein complement(1257832..1258728) Burkholderia cenocepacia AU 1054 4095822 YP_623944.1 CDS Bcen_4082 NC_008061.1 1259242 1259841 D KEGG: aci:ACIAD1616 nitrile hydratase subunit alpha (nitrilase) (NHase) TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; nitrile hydratase subunit alpha 1259242..1259841 Burkholderia cenocepacia AU 1054 4095823 YP_623945.1 CDS Bcen_4083 NC_008061.1 1259886 1260539 D PFAM: nitrile hydratase, beta subunit; KEGG: aci:ACIAD1615 nitrile hydratase subunit beta (nitrilase) (NHase); nitrile hydratase 1259886..1260539 Burkholderia cenocepacia AU 1054 4095824 YP_623946.1 CDS Bcen_4084 NC_008061.1 1260536 1261798 D PFAM: cobalamin synthesis protein, P47K; KEGG: aci:ACIAD1614 nitrile hydratase activator; cobalamin synthesis protein, P47K 1260536..1261798 Burkholderia cenocepacia AU 1054 4095825 YP_623947.1 CDS Bcen_4085 NC_008061.1 1261986 1262573 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B1731 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 1261986..1262573 Burkholderia cenocepacia AU 1054 4095826 YP_623948.1 CDS Bcen_4086 NC_008061.1 1262586 1263431 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B1732 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1262586..1263431) Burkholderia cenocepacia AU 1054 4095827 YP_623949.1 CDS Bcen_4087 NC_008061.1 1263686 1264243 R KEGG: bpm:BURPS1710b_0558 hypothetical protein; hypothetical protein complement(1263686..1264243) Burkholderia cenocepacia AU 1054 4095828 YP_623950.1 CDS Bcen_4088 NC_008061.1 1264599 1265153 D KEGG: bpm:BURPS1710b_0558 hypothetical protein; hypothetical protein 1264599..1265153 Burkholderia cenocepacia AU 1054 4093846 YP_623951.1 CDS Bcen_4089 NC_008061.1 1265272 1265826 D KEGG: bpm:BURPS1710b_0558 hypothetical protein; hypothetical protein 1265272..1265826 Burkholderia cenocepacia AU 1054 4093847 YP_623952.1 CDS Bcen_4090 NC_008061.1 1266225 1267019 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B1733 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1266225..1267019 Burkholderia cenocepacia AU 1054 4093848 YP_623953.1 CDS Bcen_4091 NC_008061.1 1267059 1267478 R KEGG: bur:Bcep18194_B1734 hypothetical protein; hypothetical protein complement(1267059..1267478) Burkholderia cenocepacia AU 1054 4093849 YP_623954.1 CDS Bcen_4092 NC_008061.1 1267569 1268726 R KEGG: bur:Bcep18194_B1735 protein of unknown function UPF0118; permease-like complement(1267569..1268726) Burkholderia cenocepacia AU 1054 4093850 YP_623955.1 CDS Bcen_4093 NC_008061.1 1268864 1269973 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B1736 NADH-flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(1268864..1269973) Burkholderia cenocepacia AU 1054 4093851 YP_623956.1 CDS Bcen_4094 NC_008061.1 1270077 1270763 R PFAM: ThiJ/PfpI; KEGG: bur:Bcep18194_B1737 ThiJ/PfpI family protein; ThiJ/PfpI complement(1270077..1270763) Burkholderia cenocepacia AU 1054 4093852 YP_623957.1 CDS Bcen_4095 NC_008061.1 1271119 1272147 R PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: bps:BPSS0544 LacI family regulatory protein; LacI family transcriptional regulator complement(1271119..1272147) Burkholderia cenocepacia AU 1054 4093853 YP_623958.1 CDS Bcen_4096 NC_008061.1 1272335 1273918 D PFAM: glycoside hydrolase, family 68; KEGG: bte:BTH_II1872 levansucrase; levansucrase 1272335..1273918 Burkholderia cenocepacia AU 1054 4093854 YP_623959.1 CDS Bcen_4097 NC_008061.1 1274094 1275731 D KEGG: bte:BTH_II1873 levanase PFAM: Glycosyl hydrolases family 32, N terminal; SMART: Glycoside hydrolase, family 32; levanase 1274094..1275731 Burkholderia cenocepacia AU 1054 4093855 YP_623960.1 CDS Bcen_4098 NC_008061.1 1275800 1276549 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B1738 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(1275800..1276549) Burkholderia cenocepacia AU 1054 4093856 YP_623961.1 CDS Bcen_4099 NC_008061.1 1276672 1277649 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B1739 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1276672..1277649) Burkholderia cenocepacia AU 1054 4093857 YP_623962.1 CDS Bcen_4100 NC_008061.1 1277755 1279239 D PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B1740 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator 1277755..1279239 Burkholderia cenocepacia AU 1054 4093858 YP_623963.1 CDS Bcen_4101 NC_008061.1 1279336 1279773 D TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B1741 alkylhydroperoxidase AhpD core; alkylhydroperoxidase AhpD core 1279336..1279773 Burkholderia cenocepacia AU 1054 4093859 YP_623964.1 CDS Bcen_4102 NC_008061.1 1279784 1280203 D PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_B1742 hypothetical protein; cupin 2, barrel 1279784..1280203 Burkholderia cenocepacia AU 1054 4093860 YP_623965.1 CDS Bcen_4103 NC_008061.1 1280312 1281532 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B1748 outer membrane protein (porin); porin complement(1280312..1281532) Burkholderia cenocepacia AU 1054 4093861 YP_623966.1 CDS Bcen_4104 NC_008061.1 1282013 1283080 R PFAM: Squalene/phytoene synthase; KEGG: bur:Bcep18194_B1749 squalene/phytoene synthase; squalene/phytoene synthase complement(1282013..1283080) Burkholderia cenocepacia AU 1054 4093862 YP_623967.1 CDS Bcen_4105 NC_008061.1 1283463 1284608 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bur:Bcep18194_B1750 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 1283463..1284608 Burkholderia cenocepacia AU 1054 4093863 YP_623968.1 CDS Bcen_4106 NC_008061.1 1284678 1286384 R PFAM: Rhodanese-like; KEGG: bur:Bcep18194_B1751 rhodanese-like protein; rhodanese-like protein complement(1284678..1286384) Burkholderia cenocepacia AU 1054 4093864 YP_623969.1 CDS Bcen_4107 NC_008061.1 1286409 1286975 R PFAM: cysteine dioxygenase type I; KEGG: bur:Bcep18194_B1752 metal-dependent enzyme of the double-stranded beta helix superfamily; cysteine dioxygenase type I complement(1286409..1286975) Burkholderia cenocepacia AU 1054 4093865 YP_623970.1 CDS Bcen_4108 NC_008061.1 1286993 1287967 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1753 transcriptional regulator, LysR family; LysR family transcriptional regulator 1286993..1287967 Burkholderia cenocepacia AU 1054 4093963 YP_623971.1 CDS Bcen_4109 NC_008061.1 1288047 1289405 R PFAM: acyl-CoA dehydrogenase-like; KEGG: bur:Bcep18194_B1754 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase complement(1288047..1289405) Burkholderia cenocepacia AU 1054 4093964 YP_623972.1 CDS Bcen_4110 NC_008061.1 1289652 1290737 D PFAM: luciferase-like; KEGG: bur:Bcep18194_B1755 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase 1289652..1290737 Burkholderia cenocepacia AU 1054 4093965 YP_623973.1 CDS Bcen_4111 NC_008061.1 1290771 1291610 D PFAM: class II aldolase/adducin-like; KEGG: bur:Bcep18194_B1756 class II aldolase/adducin-like; hypothetical protein 1290771..1291610 Burkholderia cenocepacia AU 1054 4093966 YP_623974.1 CDS Bcen_4112 NC_008061.1 1291642 1292676 D KEGG: bur:Bcep18194_B1757 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 1291642..1292676 Burkholderia cenocepacia AU 1054 4093967 YP_623975.1 CDS Bcen_4113 NC_008061.1 1292681 1293778 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1758 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 1292681..1293778 Burkholderia cenocepacia AU 1054 4093968 YP_623976.1 CDS Bcen_4114 NC_008061.1 1293772 1294593 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B1759 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit; ABC transporter 1293772..1294593 Burkholderia cenocepacia AU 1054 4093969 YP_623977.1 CDS Bcen_4115 NC_008061.1 1294644 1295828 D KEGG: bur:Bcep18194_B1760 hypothetical protein; hypothetical protein 1294644..1295828 Burkholderia cenocepacia AU 1054 4093970 YP_623978.1 CDS Bcen_4116 NC_008061.1 1295862 1296815 D TIGRFAM: Twin-arginine translocation pathway signal; KEGG: bur:Bcep18194_B1761 ABC transporter, substrate-binding protein, aliphatic sulphonates; ABC transporter, substrate-binding protein, aliphatic sulfonates 1295862..1296815 Burkholderia cenocepacia AU 1054 4093971 YP_623979.1 CDS Bcen_4117 NC_008061.1 1296903 1297769 D PFAM: MOSC; KEGG: bur:Bcep18194_B1762 uncharacterized Fe-S protein; MOSC domain-containing protein 1296903..1297769 Burkholderia cenocepacia AU 1054 4093972 YP_623980.1 CDS Bcen_4118 NC_008061.1 1297825 1299249 R PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_B1763 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase complement(1297825..1299249) Burkholderia cenocepacia AU 1054 4093973 YP_623981.1 CDS Bcen_4119 NC_008061.1 1299246 1299920 R PFAM: response regulator receiver; KEGG: bur:Bcep18194_B1764 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1299246..1299920) Burkholderia cenocepacia AU 1054 4093974 YP_623982.1 CDS Bcen_4120 NC_008061.1 1300046 1301281 R TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1765 drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter complement(1300046..1301281) Burkholderia cenocepacia AU 1054 4093975 YP_623983.1 CDS Bcen_4121 NC_008061.1 1301383 1302864 D PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B1766 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator 1301383..1302864 Burkholderia cenocepacia AU 1054 4093976 YP_623984.1 CDS Bcen_4122 NC_008061.1 1303058 1304158 D PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_B1767 ABC Fe3+ siderophore transporter, periplasmic ligand binding protein; extracellular solute-binding protein 1303058..1304158 Burkholderia cenocepacia AU 1054 4093977 YP_623985.1 CDS Bcen_4123 NC_008061.1 1304267 1306039 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1768 ABC Fe3+ siderophore transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1304267..1306039 Burkholderia cenocepacia AU 1054 4093978 YP_623986.1 CDS Bcen_4124 NC_008061.1 1306032 1307099 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B1769 ABC transporter, ATPase subunit; ABC transporter 1306032..1307099 Burkholderia cenocepacia AU 1054 4093979 YP_623987.1 CDS Bcen_4125 NC_008061.1 1307252 1308343 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B1770 outer membrane protein (porin); porin 1307252..1308343 Burkholderia cenocepacia AU 1054 4093980 YP_623988.1 CDS Bcen_4126 NC_008061.1 1308489 1309451 R PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B1771 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase complement(1308489..1309451) Burkholderia cenocepacia AU 1054 4093981 YP_623989.1 CDS Bcen_4127 NC_008061.1 1309484 1309735 R KEGG: bur:Bcep18194_B1772 hypothetical protein; hypothetical protein complement(1309484..1309735) Burkholderia cenocepacia AU 1054 4094078 YP_623990.1 CDS Bcen_4128 NC_008061.1 1309831 1310622 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B1773 transcriptional regulator, AraC family; AraC family transcriptional regulator 1309831..1310622 Burkholderia cenocepacia AU 1054 4094079 YP_623991.1 CDS Bcen_4129 NC_008061.1 1310698 1311504 R KEGG: bur:Bcep18194_B1777 2-dehydro-3-deoxyglucarate aldolase TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase complement(1310698..1311504) Burkholderia cenocepacia AU 1054 4094080 YP_623992.1 CDS Bcen_4130 NC_008061.1 1311517 1312320 R KEGG: bur:Bcep18194_B1778 4-oxalocrotonate decarboxylase TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase complement(1311517..1312320) Burkholderia cenocepacia AU 1054 4094081 YP_623993.1 CDS Bcen_4131 NC_008061.1 1312340 1312732 R PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bur:Bcep18194_B1779 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase complement(1312340..1312732) Burkholderia cenocepacia AU 1054 4094082 YP_623994.1 CDS Bcen_4132 NC_008061.1 1312777 1313625 R KEGG: bur:Bcep18194_B1780 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; 3,4-dihydroxyphenylacetate 2,3-dioxygenase complement(1312777..1313625) Burkholderia cenocepacia AU 1054 4094083 YP_623995.1 CDS Bcen_4133 NC_008061.1 1313672 1315135 R KEGG: bur:Bcep18194_B1781 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase complement(1313672..1315135) Burkholderia cenocepacia AU 1054 4094084 YP_623996.1 CDS Bcen_4134 NC_008061.1 1315162 1315926 R KEGG: bur:Bcep18194_B1782 5-carboxymethyl-2-hydroxymuconate delta-isomerase TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase complement(1315162..1315926) Burkholderia cenocepacia AU 1054 4094085 YP_623997.1 CDS Bcen_4135 NC_008061.1 1315923 1316612 R KEGG: bur:Bcep18194_B1783 5-carboxymethyl-2-hydroxymuconate delta-isomerase TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase complement(1315923..1316612) Burkholderia cenocepacia AU 1054 4094086 YP_623998.1 CDS Bcen_4136 NC_008061.1 1316738 1317205 D TIGRFAM: Homoprotocatechuate degradation transcriptional regulator HpaR; PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B1784 transcriptional regulator, MarR family; MarR family transcriptional regulator 1316738..1317205 Burkholderia cenocepacia AU 1054 4094087 YP_623999.1 CDS Bcen_4137 NC_008061.1 1317281 1318495 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B1785 NAD-dependent epimerase/dehydratase; Male sterility-like complement(1317281..1318495) Burkholderia cenocepacia AU 1054 4094088 YP_624000.1 CDS Bcen_4138 NC_008061.1 1319149 1319496 D KEGG: bur:Bcep18194_B1787 hypothetical protein; hypothetical protein 1319149..1319496 Burkholderia cenocepacia AU 1054 4094089 YP_624001.1 CDS Bcen_4139 NC_008061.1 1319917 1321815 D PFAM: penicillin-binding protein, transpeptidase; KEGG: bur:Bcep18194_B1788 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 1319917..1321815 Burkholderia cenocepacia AU 1054 4094090 YP_624002.1 CDS Bcen_4140 NC_008061.1 1321843 1323558 R PFAM: TrkA-N; KEGG: bur:Bcep18194_B1791 TrkA-N family protein; sodium/hydrogen exchanger complement(1321843..1323558) Burkholderia cenocepacia AU 1054 4094091 YP_624003.1 CDS Bcen_4141 NC_008061.1 1323766 1325193 R PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_B1792 cytochrome c, class I; cytochrome c, class I complement(1323766..1325193) Burkholderia cenocepacia AU 1054 4094092 YP_624004.1 CDS Bcen_4142 NC_008061.1 1325190 1326968 R PFAM: glucose-methanol-choline oxidoreductase; KEGG: bur:Bcep18194_B1793 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(1325190..1326968) Burkholderia cenocepacia AU 1054 4094093 YP_624005.1 CDS Bcen_4143 NC_008061.1 1326968 1327759 R KEGG: bur:Bcep18194_B1794 hypothetical protein; hypothetical protein complement(1326968..1327759) Burkholderia cenocepacia AU 1054 4094094 YP_624006.1 CDS Bcen_4144 NC_008061.1 1328109 1328429 D KEGG: bur:Bcep18194_B1795 phosphotransferase KptA/Tpt1; RNA:NAD 2'-phosphotransferase-like 1328109..1328429 Burkholderia cenocepacia AU 1054 4094095 YP_624007.1 CDS Bcen_4145 NC_008061.1 1328449 1328865 R KEGG: bur:Bcep18194_B1796 hypothetical protein; hypothetical protein complement(1328449..1328865) Burkholderia cenocepacia AU 1054 4094096 YP_624008.1 CDS Bcen_4146 NC_008061.1 1329162 1330277 D TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT-like; KEGG: bur:Bcep18194_B1797 alanine dehydrogenase and pyridine nucleotide transhydrogenase; alanine dehydrogenase 1329162..1330277 Burkholderia cenocepacia AU 1054 4094097 YP_624009.1 CDS Bcen_4147 NC_008061.1 1330324 1332099 R PFAM: PHP-like; SMART: DNA polymerase X; KEGG: bur:Bcep18194_B1798 DNA polymerase IV (family X); PHP-like protein complement(1330324..1332099) Burkholderia cenocepacia AU 1054 4094195 YP_624010.1 CDS Bcen_4148 NC_008061.1 1332249 1332641 R PFAM: zinc finger, DksA/TraR C4-type; KEGG: bur:Bcep18194_B1799 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator complement(1332249..1332641) Burkholderia cenocepacia AU 1054 4094196 YP_624011.1 CDS Bcen_4149 NC_008061.1 1333020 1334426 R PFAM: sugar transferase; KEGG: bur:Bcep18194_B1801 sugar transferase; UDP-phosphate galactosephosphotransferase complement(1333020..1334426) Burkholderia cenocepacia AU 1054 4094197 YP_624012.1 CDS Bcen_4150 NC_008061.1 1334438 1335220 R SMART: regulatory protein, Crp; KEGG: bur:Bcep18194_B1802 transcriptional regulator, Crp/Fnr family; CRP/FNR family transcriptional regulator complement(1334438..1335220) Burkholderia cenocepacia AU 1054 4094198 YP_624013.1 CDS Bcen_4151 NC_008061.1 1336142 1336924 D PFAM: cyclic nucleotide-binding; KEGG: bur:Bcep18194_B1803 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein 1336142..1336924 Burkholderia cenocepacia AU 1054 4094199 YP_624014.1 CDS Bcen_4152 NC_008061.1 1337044 1337355 D Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 1337044..1337355 Burkholderia cenocepacia AU 1054 4094200 YP_624015.1 CDS Bcen_4153 NC_008061.1 1337352 1338548 D PFAM: Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_B1805 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase 1337352..1338548 Burkholderia cenocepacia AU 1054 4094201 YP_624016.1 CDS Bcen_4154 NC_008061.1 1338545 1339519 D KEGG: bur:Bcep18194_B1806 seryl-tRNA synthetase-like; hypothetical protein 1338545..1339519 Burkholderia cenocepacia AU 1054 4094202 YP_624017.1 CDS Bcen_4155 NC_008061.1 1339516 1340571 D KEGG: bur:Bcep18194_B1807 hypothetical protein; hypothetical protein 1339516..1340571 Burkholderia cenocepacia AU 1054 4094203 YP_624018.1 CDS Bcen_4156 NC_008061.1 1340568 1343054 D PFAM: glycoside hydrolase family 2, immunoglobulin-like beta-sandwich; KEGG: bur:Bcep18194_B1808 beta-mannosidase; Beta-mannosidase 1340568..1343054 Burkholderia cenocepacia AU 1054 4094204 YP_624019.1 CDS Bcen_4157 NC_008061.1 1343096 1344487 R PFAM: sigma-54 factor, interaction region; SMART: ATPase; KEGG: bur:Bcep18194_B1809 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator complement(1343096..1344487) Burkholderia cenocepacia AU 1054 4094205 YP_624020.1 CDS Bcen_4158 NC_008061.1 1345144 1345479 R hypothetical protein complement(1345144..1345479) Burkholderia cenocepacia AU 1054 4094206 YP_624021.1 CDS Bcen_4159 NC_008061.1 1345815 1346393 D KEGG: bur:Bcep18194_B1811 acyltransferase-like; acyltransferase-like protein 1345815..1346393 Burkholderia cenocepacia AU 1054 4094207 YP_624022.1 CDS Bcen_4160 NC_008061.1 1346390 1347970 D KEGG: bur:Bcep18194_B1812 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1346390..1347970 Burkholderia cenocepacia AU 1054 4094208 YP_624023.1 CDS Bcen_4161 NC_008061.1 1348279 1349427 D PFAM: glycosyl transferase, group 1; KEGG: bps:BPSL2773 glycosyltransferase protein; group 1 glycosyl transferase 1348279..1349427 Burkholderia cenocepacia AU 1054 4094209 YP_624024.1 CDS Bcen_4162 NC_008061.1 1349600 1350679 D PFAM: glycosyl transferase, group 1; KEGG: bpm:BURPS1710b_0824 glycosyl transferases group 1 protein; group 1 glycosyl transferase 1349600..1350679 Burkholderia cenocepacia AU 1054 4094210 YP_624025.1 CDS Bcen_4163 NC_008061.1 1350909 1353155 R PFAM: lipopolysaccharide biosynthesis; KEGG: exopolysaccharide tyrosine-protein kinase; lipopolysaccharide biosynthesis protein complement(1350909..1353155) Burkholderia cenocepacia AU 1054 4094211 YP_624026.1 CDS Bcen_4164 NC_008061.1 1353201 1354553 R KEGG: bte:BTH_II0395 hypothetical protein; hypothetical protein complement(1353201..1354553) Burkholderia cenocepacia AU 1054 4094212 YP_624027.1 CDS Bcen_4165 NC_008061.1 1354550 1355806 R KEGG: membrane protein; hypothetical protein complement(1354550..1355806) Burkholderia cenocepacia AU 1054 4094213 YP_624028.1 CDS Bcen_4166 NC_008061.1 1355986 1357239 R PFAM: polysaccharide biosynthesis protein; KEGG: bpm:BURPS1710b_0806 polysaccharide biosynthesis family protein; polysaccharide biosynthesis protein complement(1355986..1357239) Burkholderia cenocepacia AU 1054 4095927 YP_624029.1 CDS Bcen_4167 NC_008061.1 1357278 1358468 R PFAM: glycosyl transferase, group 1; KEGG: bpm:BURPS1710b_0807 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase complement(1357278..1358468) Burkholderia cenocepacia AU 1054 4095928 YP_624030.1 CDS Bcen_4169 NC_008061.1 1360942 1362213 R PFAM: polysaccharide export protein; KEGG: bur:Bcep18194_B1817 polysaccharide export protein; polysaccharide export protein complement(1360942..1362213) Burkholderia cenocepacia AU 1054 4095930 YP_624031.1 CDS Bcen_4170 NC_008061.1 1362545 1364935 R KEGG: bur:Bcep18194_B0441 outer membrane protein, haemagluttinin-like; hypothetical protein complement(1362545..1364935) Burkholderia cenocepacia AU 1054 4095931 YP_624032.1 CDS Bcen_4171 NC_008061.1 1365639 1367840 D PFAM: glycoside hydrolase, family 3-like; KEGG: bur:Bcep18194_B1822 beta-glucosidase; Beta-glucosidase 1365639..1367840 Burkholderia cenocepacia AU 1054 4095932 YP_624033.1 CDS Bcen_4172 NC_008061.1 1368045 1368695 R KEGG: bur:Bcep18194_B1829 hypothetical protein; hypothetical protein complement(1368045..1368695) Burkholderia cenocepacia AU 1054 4095933 YP_624034.1 CDS Bcen_4173 NC_008061.1 1368754 1369611 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1830 transcriptional regulator, LysR family; LysR family transcriptional regulator 1368754..1369611 Burkholderia cenocepacia AU 1054 4095934 YP_624035.1 CDS Bcen_4174 NC_008061.1 1369884 1370471 D PFAM: protein of unknown function UPF0029; KEGG: bur:Bcep18194_B1832 protein of unknown function UPF0029; hypothetical protein 1369884..1370471 Burkholderia cenocepacia AU 1054 4095935 YP_624036.1 CDS Bcen_4175 NC_008061.1 1370550 1371500 R PFAM: protein of unknown function DUF344; KEGG: bur:Bcep18194_B1834 protein of unknown function DUF344; hypothetical protein complement(1370550..1371500) Burkholderia cenocepacia AU 1054 4095936 YP_624037.1 CDS Bcen_4176 NC_008061.1 1371588 1372982 R PFAM: OmpW; KEGG: bur:Bcep18194_B1835 OmpW family protein; OmpW complement(1371588..1372982) Burkholderia cenocepacia AU 1054 4095937 YP_624038.1 CDS Bcen_4177 NC_008061.1 1372987 1374282 R KEGG: bur:Bcep18194_B1836 multidrug resistance efflux pump-like; multidrug resistance efflux pump-like complement(1372987..1374282) Burkholderia cenocepacia AU 1054 4095938 YP_624039.1 CDS Bcen_4178 NC_008061.1 1374295 1375296 R KEGG: bur:Bcep18194_B1837 hypothetical protein; hypothetical protein complement(1374295..1375296) Burkholderia cenocepacia AU 1054 4095939 YP_624040.1 CDS Bcen_4179 NC_008061.1 1375296 1377416 R PFAM: ABC transporter, transmembrane region; SMART: ATPase; KEGG: bur:Bcep18194_B1838 ABC bacteriocin/lantibiotic efflux pump, with peptidase C39, bacteriocin processing; ABC transporter complement(1375296..1377416) Burkholderia cenocepacia AU 1054 4095940 YP_624041.1 CDS Bcen_4180 NC_008061.1 1377559 1377744 R KEGG: bur:Bcep18194_B1839 hypothetical protein; hypothetical protein complement(1377559..1377744) Burkholderia cenocepacia AU 1054 4095941 YP_624042.1 CDS Bcen_4181 NC_008061.1 1377969 1378142 R KEGG: bur:Bcep18194_B1840 hypothetical protein; hypothetical protein complement(1377969..1378142) Burkholderia cenocepacia AU 1054 4095942 YP_624043.1 CDS Bcen_4182 NC_008061.1 1378424 1379839 D PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B1841 outer membrane efflux protein; outer membrane efflux protein 1378424..1379839 Burkholderia cenocepacia AU 1054 4095943 YP_624044.1 CDS Bcen_4183 NC_008061.1 1380022 1380471 R PFAM: helix-turn-helix, HxlR type; KEGG: bur:Bcep18194_B1848 transcriptional regulator; HxlR family transcriptional regulator complement(1380022..1380471) Burkholderia cenocepacia AU 1054 4095944 YP_624045.1 CDS Bcen_4184 NC_008061.1 1380822 1381745 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1849 alpha/beta hydrolase; alpha/beta hydrolase 1380822..1381745 Burkholderia cenocepacia AU 1054 4095945 YP_624046.1 CDS Bcen_4185 NC_008061.1 1381829 1383550 R PFAM: gamma-glutamyltranspeptidase; KEGG: bur:Bcep18194_B1850 gamma-glutamyltransferase; gamma-glutamyltransferase complement(1381829..1383550) Burkholderia cenocepacia AU 1054 4095946 YP_624047.1 CDS Bcen_4186 NC_008061.1 1383948 1384472 D KEGG: bur:Bcep18194_B1851 membrane protein; hypothetical protein 1383948..1384472 Burkholderia cenocepacia AU 1054 4094507 YP_624048.1 CDS Bcen_4189 NC_008061.1 1389277 1390614 D PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1853 amino acid transporter; amino acid permease 1389277..1390614 Burkholderia cenocepacia AU 1054 4094509 YP_624049.1 CDS Bcen_4190 NC_008061.1 1390714 1391073 R KEGG: bur:Bcep18194_B1854 hypothetical protein; hypothetical protein complement(1390714..1391073) Burkholderia cenocepacia AU 1054 4094510 YP_624050.1 CDS Bcen_4191 NC_008061.1 1391085 1391459 R PFAM: protein of unknown function DUF891; KEGG: bur:Bcep18194_B1855 protein of unknown function DUF891; hypothetical protein complement(1391085..1391459) Burkholderia cenocepacia AU 1054 4094511 YP_624051.1 CDS Bcen_4192 NC_008061.1 1391575 1392561 R TIGRFAM: Pca transcription factor PcaQ; PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1856 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1391575..1392561) Burkholderia cenocepacia AU 1054 4094512 YP_624052.1 CDS Bcen_4193 NC_008061.1 1392639 1393376 R PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_B1857 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(1392639..1393376) Burkholderia cenocepacia AU 1054 4094513 YP_624053.1 CDS Bcen_4194 NC_008061.1 1393497 1394063 D KEGG: bur:Bcep18194_B1858 hypothetical protein; hypothetical protein 1393497..1394063 Burkholderia cenocepacia AU 1054 4094514 YP_624054.1 CDS Bcen_4195 NC_008061.1 1394341 1395048 D TIGRFAM: Protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bur:Bcep18194_B1859 intradiol ring-cleavage dioxygenase; protocatechuate 3,4-dioxygenase subunit beta 1394341..1395048 Burkholderia cenocepacia AU 1054 4094515 YP_624055.1 CDS Bcen_4196 NC_008061.1 1395052 1395645 D KEGG: bur:Bcep18194_B1860 protocatechuate 3,4-dioxygenase TIGRFAM: Protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; protocatechuate 3,4-dioxygenase subunit alpha 1395052..1395645 Burkholderia cenocepacia AU 1054 4094516 YP_624056.1 CDS Bcen_4197 NC_008061.1 1396076 1396855 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B1861 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1396076..1396855) Burkholderia cenocepacia AU 1054 4094517 YP_624057.1 CDS Bcen_4198 NC_008061.1 1396998 1397777 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1862 alpha/beta hydrolase; alpha/beta hydrolase 1396998..1397777 Burkholderia cenocepacia AU 1054 4094518 YP_624058.1 CDS Bcen_4199 NC_008061.1 1397813 1398640 R PFAM: peptidase M55, D-aminopeptidase; KEGG: bur:Bcep18194_B1863 peptidase M55, D-aminopeptidase; peptidase M55, D-aminopeptidase complement(1397813..1398640) Burkholderia cenocepacia AU 1054 4094519 YP_624059.1 CDS Bcen_4200 NC_008061.1 1398637 1399719 R PFAM: peptidase S58, DmpA; KEGG: bur:Bcep18194_B1864 peptidase S58, DmpA; peptidase S58, DmpA complement(1398637..1399719) Burkholderia cenocepacia AU 1054 4094520 YP_624060.1 CDS Bcen_4201 NC_008061.1 1399719 1400612 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1865 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1399719..1400612) Burkholderia cenocepacia AU 1054 4094521 YP_624061.1 CDS Bcen_4202 NC_008061.1 1400609 1401541 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1866 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component complement(1400609..1401541) Burkholderia cenocepacia AU 1054 4094522 YP_624062.1 CDS Bcen_4203 NC_008061.1 1401609 1403171 R PFAM: extracellular solute-binding protein, family 5; KEGG: bur:Bcep18194_B1867 ABC dipeptide/oligopeptide/nickel family transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(1401609..1403171) Burkholderia cenocepacia AU 1054 4094523 YP_624063.1 CDS Bcen_4204 NC_008061.1 1403300 1405204 R KEGG: bur:Bcep18194_B1868 ABC dipeptide/oligopeptide/nickel family transporter, ATPase subunit TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; PFAM: ABC transporter related; SMART: ATPase; oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein complement(1403300..1405204) Burkholderia cenocepacia AU 1054 4094524 YP_624064.1 CDS Bcen_4205 NC_008061.1 1405231 1406268 R PFAM: peptidase T2, asparaginase 2; KEGG: ansA; asparaginase; peptidase T2, asparaginase 2 complement(1405231..1406268) Burkholderia cenocepacia AU 1054 4094525 YP_624065.1 CDS Bcen_4206 NC_008061.1 1406265 1407209 R PFAM: helix-turn-helix protein RpiR; KEGG: bur:Bcep18194_B1870 transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(1406265..1407209) Burkholderia cenocepacia AU 1054 4095907 YP_624066.1 CDS Bcen_4207 NC_008061.1 1407680 1408951 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1871 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1407680..1408951 Burkholderia cenocepacia AU 1054 4095908 YP_624067.1 CDS Bcen_4208 NC_008061.1 1408979 1411399 D PFAM: glycoside hydrolase, family 31; KEGG: bur:Bcep18194_B1872 alpha-glucosidase; glycoside hydrolase family protein 1408979..1411399 Burkholderia cenocepacia AU 1054 4095909 YP_624068.1 CDS Bcen_4209 NC_008061.1 1411513 1412700 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B1873 outer membrane protein (porin); porin 1411513..1412700 Burkholderia cenocepacia AU 1054 4095910 YP_624069.1 CDS Bcen_4210 NC_008061.1 1412990 1415020 D TIGRFAM: choline/carnitine/betaine transport; PFAM: BCCT transporter; KEGG: bur:Bcep18194_B1874 BCCT transporter; choline/carnitine/betaine transport 1412990..1415020 Burkholderia cenocepacia AU 1054 4095911 YP_624070.1 CDS Bcen_4211 NC_008061.1 1415017 1415328 D KEGG: bur:Bcep18194_B1875 hypothetical protein; hypothetical protein 1415017..1415328 Burkholderia cenocepacia AU 1054 4095912 YP_624071.1 CDS Bcen_4212 NC_008061.1 1415431 1416279 R PFAM: methyltransferase small; KEGG: bur:Bcep18194_B1876 methylase involved in ubiquinone/menaquinone biosynthesis-like; methyltransferase type 11 complement(1415431..1416279) Burkholderia cenocepacia AU 1054 4095913 YP_624072.1 CDS Bcen_4213 NC_008061.1 1416433 1417896 D PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B1877 metallophosphoesterase; metallophosphoesterase 1416433..1417896 Burkholderia cenocepacia AU 1054 4095914 YP_624073.1 CDS Bcen_4214 NC_008061.1 1417893 1419278 D PFAM: Di-haem cytochrome c peroxidase; KEGG: bur:Bcep18194_B1878 di-haem cytochrome c peroxidase; di-heme cytochrome c peroxidase 1417893..1419278 Burkholderia cenocepacia AU 1054 4095915 YP_624074.1 CDS Bcen_4215 NC_008061.1 1419375 1419653 D KEGG: bur:Bcep18194_B1879 hypothetical protein; hypothetical protein 1419375..1419653 Burkholderia cenocepacia AU 1054 4095916 YP_624075.1 CDS Bcen_4216 NC_008061.1 1419738 1419938 R KEGG: bur:Bcep18194_B1880 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator complement(1419738..1419938) Burkholderia cenocepacia AU 1054 4095917 YP_624076.1 CDS Bcen_4217 NC_008061.1 1420022 1421383 R PFAM: General substrate transporter; KEGG: bur:Bcep18194_B1885 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1420022..1421383) Burkholderia cenocepacia AU 1054 4095918 YP_624077.1 CDS Bcen_4218 NC_008061.1 1421464 1422672 R catalyzes the formation of catechol from salicylate; salicylate hydroxylase complement(1421464..1422672) Burkholderia cenocepacia AU 1054 4095919 YP_624078.1 CDS Bcen_4219 NC_008061.1 1422705 1423346 R TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_B1887 maleylacetoacetate isomerase; maleylacetoacetate isomerase complement(1422705..1423346) Burkholderia cenocepacia AU 1054 4095920 YP_624079.1 CDS Bcen_4220 NC_008061.1 1423381 1424079 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B1888 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase complement(1423381..1424079) Burkholderia cenocepacia AU 1054 4095921 YP_624080.1 CDS Bcen_4221 NC_008061.1 1424167 1425210 R TIGRFAM: Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_B1889 gentisate 1,2-dioxygenase; gentisate 1,2-dioxygenase complement(1424167..1425210) Burkholderia cenocepacia AU 1054 4095922 YP_624081.1 CDS Bcen_4222 NC_008061.1 1425375 1426319 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1890 transcriptional regulator, LysR family; LysR family transcriptional regulator 1425375..1426319 Burkholderia cenocepacia AU 1054 4095923 YP_624082.1 CDS Bcen_4223 NC_008061.1 1426369 1427637 R PFAM: BFD-like [2Fe-2S]-binding region; KEGG: bur:Bcep18194_B1891 pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1426369..1427637) Burkholderia cenocepacia AU 1054 4095924 YP_624083.1 CDS Bcen_4224 NC_008061.1 1427634 1427867 R PFAM: ferredoxin; KEGG: bur:Bcep18194_B1892 ferredoxin; ferredoxin complement(1427634..1427867) Burkholderia cenocepacia AU 1054 4095925 YP_624084.1 CDS Bcen_4225 NC_008061.1 1427947 1429074 R PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B1893 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(1427947..1429074) Burkholderia cenocepacia AU 1054 4095926 YP_624085.1 CDS Bcen_4226 NC_008061.1 1429071 1430150 R PFAM: proline racemase; KEGG: bur:Bcep18194_B1894 proline racemase; hydroxyproline-2-epimerase complement(1429071..1430150) Burkholderia cenocepacia AU 1054 4095574 YP_624086.1 CDS Bcen_4227 NC_008061.1 1430255 1431175 D PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_B1895 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 1430255..1431175 Burkholderia cenocepacia AU 1054 4095575 YP_624087.1 CDS Bcen_4228 NC_008061.1 1431408 1433033 D PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1896 amino acid transporter; amino acid permease 1431408..1433033 Burkholderia cenocepacia AU 1054 4095576 YP_624088.1 CDS Bcen_4229 NC_008061.1 1433106 1434698 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B1897 aldehyde dehydrogenase; aldehyde dehydrogenase 1433106..1434698 Burkholderia cenocepacia AU 1054 4095577 YP_624089.1 CDS Bcen_4230 NC_008061.1 1434691 1435713 D PFAM: Malate/L-lactate dehydrogenase; KEGG: bur:Bcep18194_B1898 malate/L-lactate dehydrogenase; malate/L-lactate dehydrogenase 1434691..1435713 Burkholderia cenocepacia AU 1054 4095578 YP_624090.1 CDS Bcen_4231 NC_008061.1 1436230 1438089 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1436230..1438089 Burkholderia cenocepacia AU 1054 4095579 YP_624091.1 CDS Bcen_4232 NC_008061.1 1438218 1439156 R PFAM: protein of unknown function DUF1058; KEGG: bur:Bcep18194_B1900 uncharacterized protein with a SH3 domain; SH3, type 3 complement(1438218..1439156) Burkholderia cenocepacia AU 1054 4095580 YP_624092.1 CDS Bcen_4233 NC_008061.1 1439190 1439615 R KEGG: bur:Bcep18194_B1901 hypothetical protein; hypothetical protein complement(1439190..1439615) Burkholderia cenocepacia AU 1054 4095581 YP_624093.1 CDS Bcen_4234 NC_008061.1 1439913 1441457 D PFAM: sigma-70 region 1.1; KEGG: bur:Bcep18194_B1902 sigma 38 (RpoS); RNA polymerase, sigma 38 subunit, RpoS 1439913..1441457 Burkholderia cenocepacia AU 1054 4095582 YP_624094.1 CDS Bcen_4235 NC_008061.1 1441640 1442521 D SMART: Helix-hairpin-helix DNA-binding, class 1; KEGG: bur:Bcep18194_B1903 DNA polymerase IV (family X)-like; helix-hairpin-helix DNA-binding protein 1441640..1442521 Burkholderia cenocepacia AU 1054 4095583 YP_624095.1 CDS Bcen_4236 NC_008061.1 1442670 1443095 R PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_B1905 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(1442670..1443095) Burkholderia cenocepacia AU 1054 4095584 YP_624096.1 CDS Bcen_4237 NC_008061.1 1443236 1443733 D KEGG: bur:Bcep18194_B1906 hypothetical protein; hypothetical protein 1443236..1443733 Burkholderia cenocepacia AU 1054 4095585 YP_624097.1 CDS Bcen_4238 NC_008061.1 1443837 1444277 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B1907 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(1443837..1444277) Burkholderia cenocepacia AU 1054 4095586 YP_624098.1 CDS Bcen_4239 NC_008061.1 1444469 1445950 D TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B1908 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 1444469..1445950 Burkholderia cenocepacia AU 1054 4095587 YP_624099.1 CDS Bcen_4240 NC_008061.1 1445981 1447495 R PFAM: acetyl-CoA hydrolase/transferase; KEGG: bur:Bcep18194_B1909 acetyl-CoA hydrolase; Acetyl-CoA hydrolase complement(1445981..1447495) Burkholderia cenocepacia AU 1054 4095588 YP_624100.1 CDS Bcen_4241 NC_008061.1 1447998 1448693 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bur:Bcep18194_B1910 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1447998..1448693 Burkholderia cenocepacia AU 1054 4095589 YP_624101.1 CDS Bcen_4242 NC_008061.1 1448690 1449499 D PFAM: 2OG-Fe(II) oxygenase; KEGG: bur:Bcep18194_B1911 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 1448690..1449499 Burkholderia cenocepacia AU 1054 4095590 YP_624102.1 CDS Bcen_4243 NC_008061.1 1449577 1450449 D KEGG: bur:Bcep18194_B1912 hypothetical protein; hypothetical protein 1449577..1450449 Burkholderia cenocepacia AU 1054 4095591 YP_624103.1 CDS Bcen_4244 NC_008061.1 1450531 1451298 D KEGG: bur:Bcep18194_B1913 sugar nucleotidyltransferases-like; sugar nucleotidyltransferases-like 1450531..1451298 Burkholderia cenocepacia AU 1054 4095592 YP_624104.1 CDS Bcen_4245 NC_008061.1 1451295 1452980 D TIGRFAM: Phosphoenolpyruvate phosphomutase; KEGG: bur:Bcep18194_B1914 isocitrate lyase and phosphorylmutase; phosphoenolpyruvate phosphomutase 1451295..1452980 Burkholderia cenocepacia AU 1054 4095612 YP_624105.1 CDS Bcen_4246 NC_008061.1 1452977 1454173 D PFAM: thiamine pyrophosphate enzyme-like TPP-binding; KEGG: bur:Bcep18194_B1915 thiamine pyrophosphate enzyme, 3-phosphonopyruvate decarboxylase; thiamine pyrophosphate enzyme-like protein 1452977..1454173 Burkholderia cenocepacia AU 1054 4095613 YP_624106.1 CDS Bcen_4247 NC_008061.1 1454173 1455237 D PFAM: aminotransferase, class V; KEGG: bur:Bcep18194_B1916 aminotransferase, class V; class V aminotransferase 1454173..1455237 Burkholderia cenocepacia AU 1054 4095614 YP_624107.1 CDS Bcen_4248 NC_008061.1 1455525 1457297 D PFAM: Patatin; KEGG: noc:Noc_1025 patatin; patatin 1455525..1457297 Burkholderia cenocepacia AU 1054 4095615 YP_624108.1 CDS Bcen_4249 NC_008061.1 1457439 1458257 D KEGG: bur:Bcep18194_B1919 hypothetical protein; hypothetical protein 1457439..1458257 Burkholderia cenocepacia AU 1054 4095616 YP_624109.1 CDS Bcen_4250 NC_008061.1 1458287 1459438 R PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B1920 acyltransferase 3; acyltransferase 3 complement(1458287..1459438) Burkholderia cenocepacia AU 1054 4095617 YP_624110.1 CDS Bcen_4251 NC_008061.1 1459769 1460701 D KEGG: bur:Bcep18194_B1929 peptidase S33, proline iminopeptidase 1 TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 1459769..1460701 Burkholderia cenocepacia AU 1054 4095618 YP_624111.1 CDS Bcen_4252 NC_008061.1 1460771 1461061 R KEGG: bur:Bcep18194_B1930 hypothetical protein; hypothetical protein complement(1460771..1461061) Burkholderia cenocepacia AU 1054 4095619 YP_624112.1 CDS Bcen_4253 NC_008061.1 1461220 1462320 R PFAM: transglutaminase-like; KEGG: bur:Bcep18194_B1931 transglutaminase-like; transglutaminase complement(1461220..1462320) Burkholderia cenocepacia AU 1054 4095620 YP_624113.1 CDS Bcen_4254 NC_008061.1 1462317 1464923 R PFAM: protein of unknown function DUF403; KEGG: bur:Bcep18194_B1932 hypothetical protein; hypothetical protein complement(1462317..1464923) Burkholderia cenocepacia AU 1054 4095621 YP_624114.1 CDS Bcen_4255 NC_008061.1 1465138 1468551 R PFAM: transglutaminase-like; KEGG: bur:Bcep18194_B1933 transglutaminase-like; transglutaminase complement(1465138..1468551) Burkholderia cenocepacia AU 1054 4095622 YP_624115.1 CDS Bcen_4256 NC_008061.1 1468644 1469651 R PFAM: transglutaminase-like-like; KEGG: bur:Bcep18194_B1934 transglutaminase-like enzymes cysteine proteases-like; transglutaminase complement(1468644..1469651) Burkholderia cenocepacia AU 1054 4095623 YP_624116.1 CDS Bcen_4257 NC_008061.1 1469660 1470601 R PFAM: protein of unknown function DUF403; KEGG: bur:Bcep18194_B1935 protein of unknown function DUF403; hypothetical protein complement(1469660..1470601) Burkholderia cenocepacia AU 1054 4095624 YP_624117.1 CDS Bcen_4258 NC_008061.1 1470666 1472096 R PFAM: protein of unknown function DUF404; KEGG: bur:Bcep18194_B1936 hypothetical protein; hypothetical protein complement(1470666..1472096) Burkholderia cenocepacia AU 1054 4095625 YP_624118.1 CDS Bcen_4259 NC_008061.1 1472670 1473665 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1937 transcriptional regulator, LysR family; LysR family transcriptional regulator 1472670..1473665 Burkholderia cenocepacia AU 1054 4095626 YP_624119.1 CDS Bcen_4260 NC_008061.1 1474298 1474723 D KEGG: bur:Bcep18194_B1938 hypothetical protein; hypothetical protein 1474298..1474723 Burkholderia cenocepacia AU 1054 4095627 YP_624120.1 CDS Bcen_4261 NC_008061.1 1474791 1475567 D KEGG: bur:Bcep18194_B1939 hypothetical protein; hypothetical protein 1474791..1475567 Burkholderia cenocepacia AU 1054 4095628 YP_624121.1 CDS Bcen_4262 NC_008061.1 1475736 1478303 D KEGG: bur:Bcep18194_B1940 hypothetical protein; hypothetical protein 1475736..1478303 Burkholderia cenocepacia AU 1054 4095629 YP_624122.1 CDS Bcen_4263 NC_008061.1 1478317 1480410 D PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_B1941 polysaccharide deacetylase; polysaccharide deacetylase 1478317..1480410 Burkholderia cenocepacia AU 1054 4095630 YP_624123.1 CDS Bcen_4264 NC_008061.1 1480407 1481678 D predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 1480407..1481678 Burkholderia cenocepacia AU 1054 4095631 YP_624124.1 CDS Bcen_4265 NC_008061.1 1481656 1482144 D KEGG: bur:Bcep18194_B1943 hypothetical protein; hypothetical protein 1481656..1482144 Burkholderia cenocepacia AU 1054 4096005 YP_624125.1 CDS Bcen_4266 NC_008061.1 1482263 1484086 D TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase, class-II; KEGG: bur:Bcep18194_B1944 glucosamine-fructose-6-phosphate aminotransferase, isomerising; glucosamine--fructose-6-phosphate aminotransferase 1482263..1484086 Burkholderia cenocepacia AU 1054 4096006 YP_624126.1 CDS Bcen_4267 NC_008061.1 1484083 1485351 D KEGG: bur:Bcep18194_B1945 hypothetical protein; hypothetical protein 1484083..1485351 Burkholderia cenocepacia AU 1054 4096007 YP_624127.1 CDS Bcen_4268 NC_008061.1 1485641 1486477 D PFAM: cytochrome c, class I; KEGG: bur:Bcep18194_B1946 cytochrome c, class I; cytochrome c, class I 1485641..1486477 Burkholderia cenocepacia AU 1054 4096008 YP_624128.1 CDS Bcen_4269 NC_008061.1 1486511 1487767 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(1486511..1487767) Burkholderia cenocepacia AU 1054 4096009 YP_624129.1 CDS Bcen_4270 NC_008061.1 1487760 1488284 R KEGG: bur:Bcep18194_B1949 hypothetical protein; hypothetical protein complement(1487760..1488284) Burkholderia cenocepacia AU 1054 4096010 YP_624130.1 CDS Bcen_4271 NC_008061.1 1488326 1489492 R PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_B1950 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor complement(1488326..1489492) Burkholderia cenocepacia AU 1054 4096011 YP_624131.1 CDS Bcen_4272 NC_008061.1 1489673 1490569 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1951 transcriptional regulator, LysR family; LysR family transcriptional regulator 1489673..1490569 Burkholderia cenocepacia AU 1054 4096012 YP_624132.1 CDS Bcen_4273 NC_008061.1 1490661 1490879 D KEGG: sme:SMc01933 hypothetical protein; hypothetical protein 1490661..1490879 Burkholderia cenocepacia AU 1054 4096013 YP_624133.1 CDS Bcen_4274 NC_008061.1 1490873 1491238 D PFAM: PilT protein-like; KEGG: sme:SMc01932 hypothetical protein; PilT protein-like protein 1490873..1491238 Burkholderia cenocepacia AU 1054 4096014 YP_624134.1 CDS Bcen_4275 NC_008061.1 1491535 1492098 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bur:Bcep18194_B1953 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1491535..1492098 Burkholderia cenocepacia AU 1054 4096015 YP_624135.1 CDS Bcen_4276 NC_008061.1 1492217 1493818 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B1954 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1492217..1493818 Burkholderia cenocepacia AU 1054 4096016 YP_624136.1 CDS Bcen_4277 NC_008061.1 1493914 1494747 R KEGG: bur:Bcep18194_B1955 hypothetical protein; hypothetical protein complement(1493914..1494747) Burkholderia cenocepacia AU 1054 4096017 YP_624137.1 CDS Bcen_4278 NC_008061.1 1494904 1495803 R PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: membrane protein; aspartyl/asparaginyl beta-hydroxylase complement(1494904..1495803) Burkholderia cenocepacia AU 1054 4096018 YP_624138.1 CDS Bcen_4279 NC_008061.1 1496009 1496563 R PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B1956 hypothetical protein; carboxymuconolactone decarboxylase complement(1496009..1496563) Burkholderia cenocepacia AU 1054 4096019 YP_624139.1 CDS Bcen_4280 NC_008061.1 1496589 1497923 R PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B1957 aminotransferase class-III; hypothetical protein complement(1496589..1497923) Burkholderia cenocepacia AU 1054 4096020 YP_624140.1 CDS Bcen_4281 NC_008061.1 1497939 1498988 R PFAM: peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: bur:Bcep18194_B1958 peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase; peptidase C45, acyl-coenzyme A complement(1497939..1498988) Burkholderia cenocepacia AU 1054 4096021 YP_624141.1 CDS glnQ NC_008061.1 1499009 1499737 R similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein complement(1499009..1499737) Burkholderia cenocepacia AU 1054 4096022 YP_624142.1 CDS glnP NC_008061.1 1499734 1500441 R similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease complement(1499734..1500441) Burkholderia cenocepacia AU 1054 4096023 YP_624143.1 CDS glnH NC_008061.1 1500457 1501209 R similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein complement(1500457..1501209) Burkholderia cenocepacia AU 1054 4094987 YP_624144.1 CDS Bcen_4285 NC_008061.1 1501717 1505256 R PFAM: ABC transporter, transmembrane region; SMART: ATPase; KEGG: bur:Bcep18194_B1962 ABC efflux pump, fused ATPase and inner membrane subunits; ABC transporter complement(1501717..1505256) Burkholderia cenocepacia AU 1054 4094988 YP_624145.1 CDS Bcen_4286 NC_008061.1 1505375 1506322 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1963 transcriptional regulator, LysR family; LysR family transcriptional regulator 1505375..1506322 Burkholderia cenocepacia AU 1054 4094989 YP_624146.1 CDS Bcen_4287 NC_008061.1 1506346 1506717 R KEGG: bur:Bcep18194_B1964 membrane protein-like; membrane protein-like complement(1506346..1506717) Burkholderia cenocepacia AU 1054 4094990 YP_624147.1 CDS Bcen_4288 NC_008061.1 1507021 1508142 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1507021..1508142 Burkholderia cenocepacia AU 1054 4094991 YP_624148.1 CDS Bcen_4289 NC_008061.1 1508339 1509211 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1508339..1509211) Burkholderia cenocepacia AU 1054 4094992 YP_624149.1 CDS Bcen_4290 NC_008061.1 1509319 1510749 R PFAM: major facilitator superfamily MFS_1; KEGG: cvi:CV0719 methylenomycin A resistance protein; major facilitator transporter complement(1509319..1510749) Burkholderia cenocepacia AU 1054 4094993 YP_624150.1 CDS Bcen_4291 NC_008061.1 1510869 1511762 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0412 transcriptional regulator, LysR family; LysR family transcriptional regulator 1510869..1511762 Burkholderia cenocepacia AU 1054 4094994 YP_624151.1 CDS Bcen_4292 NC_008061.1 1511775 1512725 R hypothetical protein complement(1511775..1512725) Burkholderia cenocepacia AU 1054 4094995 YP_624152.1 CDS Bcen_4293 NC_008061.1 1512875 1513357 R KEGG: bur:Bcep18194_B1967 hypothetical protein; hypothetical protein complement(1512875..1513357) Burkholderia cenocepacia AU 1054 4094996 YP_624153.1 CDS Bcen_4294 NC_008061.1 1513471 1513836 R PFAM: response regulator receiver; KEGG: bur:Bcep18194_B1975 response regulator receiver domain protein (CheY-like); response regulator receiver protein complement(1513471..1513836) Burkholderia cenocepacia AU 1054 4094997 YP_624154.1 CDS Bcen_4295 NC_008061.1 1513873 1514832 R KEGG: bur:Bcep18194_B1976 hypothetical protein; hypothetical protein complement(1513873..1514832) Burkholderia cenocepacia AU 1054 4094998 YP_624155.1 CDS Bcen_4296 NC_008061.1 1514855 1515436 R KEGG: bur:Bcep18194_B1977 hypothetical protein; hypothetical protein complement(1514855..1515436) Burkholderia cenocepacia AU 1054 4094999 YP_624156.1 CDS Bcen_4297 NC_008061.1 1515433 1516161 R PFAM: chemotaxis sensory transducer; KEGG: bur:Bcep18194_B1978 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1515433..1516161) Burkholderia cenocepacia AU 1054 4095000 YP_624157.1 CDS Bcen_4298 NC_008061.1 1516184 1518571 R PFAM: ATP-binding region, ATPase-like; SMART: PAC motif; KEGG: bur:Bcep18194_B1979 CheA signal transduction histidine kinases; CheA signal transduction histidine kinases complement(1516184..1518571) Burkholderia cenocepacia AU 1054 4095001 YP_624158.1 CDS Bcen_4299 NC_008061.1 1518899 1519174 R KEGG: reu:Reut_C6177 virulence-associated protein homologue; virulence-associated protein complement(1518899..1519174) Burkholderia cenocepacia AU 1054 4095002 YP_624159.1 CDS Bcen_4300 NC_008061.1 1519295 1519984 D PFAM: phospholipase/Carboxylesterase; KEGG: bur:Bcep18194_B1982 phospholipase/carboxylesterase; phospholipase/carboxylesterase 1519295..1519984 Burkholderia cenocepacia AU 1054 4095003 YP_624160.1 CDS Bcen_4301 NC_008061.1 1520043 1521548 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B1983 amino acid transporter; amino acid permease complement(1520043..1521548) Burkholderia cenocepacia AU 1054 4095004 YP_624161.1 CDS aspA NC_008061.1 1521627 1523033 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(1521627..1523033) Burkholderia cenocepacia AU 1054 4095005 YP_624162.1 CDS Bcen_4303 NC_008061.1 1523176 1524150 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B1985 transcriptional regulator, LysR family; LysR family transcriptional regulator 1523176..1524150 Burkholderia cenocepacia AU 1054 4095006 YP_624163.1 CDS Bcen_4304 NC_008061.1 1524393 1525454 R PFAM: L-asparaginase II; KEGG: bur:Bcep18194_B1986 L-asparaginase II; L-asparaginase II complement(1524393..1525454) Burkholderia cenocepacia AU 1054 4094891 YP_624164.1 CDS Bcen_4305 NC_008061.1 1525612 1526649 R KEGG: bur:Bcep18194_B2011 hypothetical protein; hypothetical protein complement(1525612..1526649) Burkholderia cenocepacia AU 1054 4094892 YP_624165.1 CDS Bcen_4306 NC_008061.1 1526654 1527604 R PFAM: protein of unknown function DUF979; KEGG: bur:Bcep18194_B2012 protein of unknown function DUF979; hypothetical protein complement(1526654..1527604) Burkholderia cenocepacia AU 1054 4094893 YP_624166.1 CDS Bcen_4307 NC_008061.1 1527601 1528290 R PFAM: protein of unknown function DUF969; KEGG: bur:Bcep18194_B2013 protein of unknown function DUF969; hypothetical protein complement(1527601..1528290) Burkholderia cenocepacia AU 1054 4094894 YP_624167.1 CDS Bcen_4308 NC_008061.1 1528562 1528786 D KEGG: bur:Bcep18194_B2014 hypothetical protein; hypothetical protein 1528562..1528786 Burkholderia cenocepacia AU 1054 4094895 YP_624168.1 CDS Bcen_4309 NC_008061.1 1528835 1529299 R KEGG: bur:Bcep18194_B2015 hypothetical protein; hypothetical protein complement(1528835..1529299) Burkholderia cenocepacia AU 1054 4094896 YP_624169.1 CDS Bcen_4310 NC_008061.1 1529576 1530580 D regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1529576..1530580 Burkholderia cenocepacia AU 1054 4094897 YP_624170.1 CDS Bcen_4311 NC_008061.1 1530658 1531722 D TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bur:Bcep18194_B2018 diguanylate cyclase (GGDEF domain); diguanylate cyclase 1530658..1531722 Burkholderia cenocepacia AU 1054 4094898 YP_624171.1 CDS Bcen_4312 NC_008061.1 1531745 1533994 R TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bur:Bcep18194_B2019 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with GAF sensor; GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(1531745..1533994) Burkholderia cenocepacia AU 1054 4094899 YP_624172.1 CDS Bcen_4313 NC_008061.1 1534265 1535173 R PFAM: regulatory protein, LysR; KEGG: bte:BTH_II0243 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1534265..1535173) Burkholderia cenocepacia AU 1054 4094900 YP_624173.1 CDS Bcen_4314 NC_008061.1 1535279 1535917 D PFAM: isochorismatase hydrolase; KEGG: bte:BTH_II0242 isochorismatase, isochorismatase family; isochorismatase hydrolase 1535279..1535917 Burkholderia cenocepacia AU 1054 4094901 YP_624174.1 CDS Bcen_4315 NC_008061.1 1536041 1536841 D TIGRFAM: haloacid dehalogenase, type II; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_B2027 haloacid dehalogenase, type II; haloacid dehalogenase 1536041..1536841 Burkholderia cenocepacia AU 1054 4094902 YP_624175.1 CDS Bcen_4316 NC_008061.1 1536909 1537700 R KEGG: bur:Bcep18194_B2030 hypothetical protein; hypothetical protein complement(1536909..1537700) Burkholderia cenocepacia AU 1054 4094903 YP_624176.1 CDS Bcen_4317 NC_008061.1 1537783 1538742 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2031 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1537783..1538742) Burkholderia cenocepacia AU 1054 4094904 YP_624177.1 CDS Bcen_4318 NC_008061.1 1538901 1540220 D PFAM: General substrate transporter; KEGG: bur:Bcep18194_B2032 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1538901..1540220 Burkholderia cenocepacia AU 1054 4094905 YP_624178.1 CDS Bcen_4319 NC_008061.1 1540332 1541858 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B2033 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 1540332..1541858 Burkholderia cenocepacia AU 1054 4094906 YP_624179.1 CDS Bcen_4320 NC_008061.1 1541855 1542763 D KEGG: bur:Bcep18194_B2034 3-hydroxyisobutyrate dehydrogenase TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 1541855..1542763 Burkholderia cenocepacia AU 1054 4094907 YP_624180.1 CDS Bcen_4321 NC_008061.1 1542879 1543211 R KEGG: bur:Bcep18194_B2035 hypothetical protein; hypothetical protein complement(1542879..1543211) Burkholderia cenocepacia AU 1054 4094908 YP_624181.1 CDS Bcen_4322 NC_008061.1 1543436 1545856 R PFAM: cytochrome c, class I; KEGG: reu:Reut_A2517 cytochrome c, class I; cytochrome c, class I complement(1543436..1545856) Burkholderia cenocepacia AU 1054 4094909 YP_624182.1 CDS Bcen_4323 NC_008061.1 1545846 1546349 R PFAM: ferredoxin; KEGG: ppu:PP3947 isoquinoline 1-oxidoreductase; (2Fe-2S)-binding protein complement(1545846..1546349) Burkholderia cenocepacia AU 1054 4094871 YP_624183.1 CDS Bcen_4324 NC_008061.1 1546534 1547691 R PFAM: monooxygenase, FAD-binding; KEGG: reu:Reut_A2515 salicylate 1-monooxygenase; salicylate 1-monooxygenase complement(1546534..1547691) Burkholderia cenocepacia AU 1054 4094872 YP_624184.1 CDS Bcen_4325 NC_008061.1 1547990 1548742 D PFAM: Asp/Glu racemase; KEGG: reu:Reut_A2514 Asp/Glu racemase; Asp/Glu racemase 1547990..1548742 Burkholderia cenocepacia AU 1054 4094873 YP_624185.1 CDS Bcen_4326 NC_008061.1 1548770 1549600 D PFAM: alpha/beta hydrolase fold; KEGG: reu:Reut_A2513 alpha/beta hydrolase fold; alpha/beta hydrolase 1548770..1549600 Burkholderia cenocepacia AU 1054 4094874 YP_624186.1 CDS Bcen_4327 NC_008061.1 1549645 1550685 D KEGG: reu:Reut_B3788 hypothetical protein; hypothetical protein 1549645..1550685 Burkholderia cenocepacia AU 1054 4094875 YP_624187.1 CDS Bcen_4328 NC_008061.1 1550705 1551352 D PFAM: isochorismatase hydrolase; KEGG: reu:Reut_B3789 isochorismatase hydrolase; isochorismatase hydrolase 1550705..1551352 Burkholderia cenocepacia AU 1054 4094876 YP_624188.1 CDS Bcen_4329 NC_008061.1 1551470 1553857 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; KEGG: reu:Reut_A2509 isoquinoline 1-oxidoreductase; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 1551470..1553857 Burkholderia cenocepacia AU 1054 4094877 YP_624189.1 CDS Bcen_4330 NC_008061.1 1553883 1554329 R PFAM: regulatory protein, MarR; KEGG: reu:Reut_A2508 regulatory protein, MarR; MarR family transcriptional regulator complement(1553883..1554329) Burkholderia cenocepacia AU 1054 4094878 YP_624190.1 CDS Bcen_4331 NC_008061.1 1554416 1554655 R hypothetical protein complement(1554416..1554655) Burkholderia cenocepacia AU 1054 4094879 YP_624191.1 CDS Bcen_4332 NC_008061.1 1554869 1556176 D PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP3940 major facilitator family transporter; major facilitator transporter 1554869..1556176 Burkholderia cenocepacia AU 1054 4094880 YP_624192.1 CDS Bcen_4333 NC_008061.1 1556459 1557220 D KEGG: bur:Bcep18194_B2036 hypothetical protein; hypothetical protein 1556459..1557220 Burkholderia cenocepacia AU 1054 4094881 YP_624193.1 CDS Bcen_4334 NC_008061.1 1557328 1557879 R KEGG: bur:Bcep18194_B2037 hypothetical protein; hypothetical protein complement(1557328..1557879) Burkholderia cenocepacia AU 1054 4094882 YP_624194.1 CDS Bcen_4335 NC_008061.1 1557954 1558307 D hypothetical protein 1557954..1558307 Burkholderia cenocepacia AU 1054 4094883 YP_624195.1 CDS Bcen_4336 NC_008061.1 1558563 1560113 D PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: bur:Bcep18194_B2039 cytosine/purines, uracil, thiamine, allantoin transporter; cytosine/purines uracil thiamine allantoin permease 1558563..1560113 Burkholderia cenocepacia AU 1054 4094884 YP_624196.1 CDS Bcen_4337 NC_008061.1 1560137 1560859 D PFAM: Asp/Glu racemase; KEGG: bur:Bcep18194_B2040 Asp/Glu racemase; Asp/Glu racemase 1560137..1560859 Burkholderia cenocepacia AU 1054 4094885 YP_624197.1 CDS Bcen_4338 NC_008061.1 1560921 1562105 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2041 transcriptional regulator, LysR family; LysR family transcriptional regulator 1560921..1562105 Burkholderia cenocepacia AU 1054 4094886 YP_624198.1 CDS Bcen_4339 NC_008061.1 1562269 1562700 D KEGG: yps:YPTB3484 hypothetical protein; hypothetical protein 1562269..1562700 Burkholderia cenocepacia AU 1054 4094887 YP_624199.1 CDS Bcen_4340 NC_008061.1 1562929 1563915 D KEGG: bur:Bcep18194_B2045 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 1562929..1563915 Burkholderia cenocepacia AU 1054 4094888 YP_624200.1 CDS Bcen_4341 NC_008061.1 1563937 1564311 R KEGG: bur:Bcep18194_B2046 hypothetical protein; hypothetical protein complement(1563937..1564311) Burkholderia cenocepacia AU 1054 4094889 YP_624201.1 CDS Bcen_4342 NC_008061.1 1564621 1565718 D PFAM: glycosyl transferase, family 2; KEGG: bur:Bcep18194_B2047 glycosyl transferase, family 2; glycosyl transferase family protein 1564621..1565718 Burkholderia cenocepacia AU 1054 4094890 YP_624202.1 CDS Bcen_4343 NC_008061.1 1565725 1566972 D KEGG: bur:Bcep18194_B2048 hypothetical protein; hypothetical protein 1565725..1566972 Burkholderia cenocepacia AU 1054 4094852 YP_624203.1 CDS Bcen_4344 NC_008061.1 1567019 1568143 D KEGG: bur:Bcep18194_B2061 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 1567019..1568143 Burkholderia cenocepacia AU 1054 4094853 YP_624204.1 CDS Bcen_4345 NC_008061.1 1568165 1569007 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2062 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1568165..1569007 Burkholderia cenocepacia AU 1054 4094854 YP_624205.1 CDS Bcen_4346 NC_008061.1 1569043 1569858 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2063 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1569043..1569858 Burkholderia cenocepacia AU 1054 4094855 YP_624206.1 CDS Bcen_4347 NC_008061.1 1569899 1570744 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B2064 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit; ABC transporter 1569899..1570744 Burkholderia cenocepacia AU 1054 4094856 YP_624207.1 CDS Bcen_4348 NC_008061.1 1570893 1571846 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_B2065 taurine dioxygenase; taurine dioxygenase 1570893..1571846 Burkholderia cenocepacia AU 1054 4094857 YP_624208.1 CDS Bcen_4350 NC_008061.1 1572999 1574660 R PFAM: extracellular solute-binding protein, family 5; KEGG: bur:Bcep18194_B2067 ABC peptide transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(1572999..1574660) Burkholderia cenocepacia AU 1054 4094859 YP_624209.1 CDS Bcen_4351 NC_008061.1 1575028 1575435 D PFAM: protein of unknown function DUF427; KEGG: bur:Bcep18194_B2068 protein of unknown function DUF427; hypothetical protein 1575028..1575435 Burkholderia cenocepacia AU 1054 4094860 YP_624210.1 CDS Bcen_4352 NC_008061.1 1575935 1576927 D TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_B2069 ABC transporter, substrate-binding protein, aliphatic sulphonates; ABC transporter, substrate-binding protein, aliphatic sulfonates 1575935..1576927 Burkholderia cenocepacia AU 1054 4094861 YP_624211.1 CDS Bcen_4353 NC_008061.1 1576932 1577516 R PFAM: protein of unknown function DUF1089; KEGG: bur:Bcep18194_B2070 protein of unknown function DUF1089; hypothetical protein complement(1576932..1577516) Burkholderia cenocepacia AU 1054 4094862 YP_624212.1 CDS Bcen_4354 NC_008061.1 1577715 1578623 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2071 transcriptional regulator, LysR family; LysR family transcriptional regulator 1577715..1578623 Burkholderia cenocepacia AU 1054 4094863 YP_624213.1 CDS potE NC_008061.1 1578627 1580012 R catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter complement(1578627..1580012) Burkholderia cenocepacia AU 1054 4094864 YP_624214.1 CDS Bcen_4356 NC_008061.1 1580078 1582462 R PFAM: Orn/Lys/Arg decarboxylase, major region; KEGG: bur:Bcep18194_B2074 response regulator receiver domain protein (CheY-like); response regulator receiver protein complement(1580078..1582462) Burkholderia cenocepacia AU 1054 4094865 YP_624215.1 CDS Bcen_4357 NC_008061.1 1582584 1582829 R hypothetical protein complement(1582584..1582829) Burkholderia cenocepacia AU 1054 4094866 YP_624216.1 CDS Bcen_4358 NC_008061.1 1582848 1585067 D PFAM: Orn/Lys/Arg decarboxylase, major region; KEGG: bur:Bcep18194_B2075 ornithine decarboxylase; ornithine decarboxylase 1582848..1585067 Burkholderia cenocepacia AU 1054 4094867 YP_624217.1 CDS Bcen_4359 NC_008061.1 1585291 1586454 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2076 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1585291..1586454 Burkholderia cenocepacia AU 1054 4094868 YP_624218.1 CDS Bcen_4360 NC_008061.1 1586491 1587648 R PFAM: iron-containing alcohol dehydrogenase; KEGG: bur:Bcep18194_B2077 iron-containing alcohol dehydrogenase; alcohol dehydrogenase complement(1586491..1587648) Burkholderia cenocepacia AU 1054 4094869 YP_624219.1 CDS Bcen_4361 NC_008061.1 1587645 1587980 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bur:Bcep18194_B2078 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(1587645..1587980) Burkholderia cenocepacia AU 1054 4094870 YP_624220.1 CDS Bcen_4362 NC_008061.1 1588224 1588943 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B2084 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1588224..1588943) Burkholderia cenocepacia AU 1054 4094832 YP_624221.1 CDS Bcen_4363 NC_008061.1 1589018 1590037 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2085 transcriptional regulator, LysR family; LysR family transcriptional regulator 1589018..1590037 Burkholderia cenocepacia AU 1054 4094833 YP_624222.1 CDS Bcen_4364 NC_008061.1 1590302 1591690 D TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_B2088 xanthine/uracil transporter; uracil-xanthine permease 1590302..1591690 Burkholderia cenocepacia AU 1054 4094834 YP_624223.1 CDS Bcen_4365 NC_008061.1 1591879 1592304 D PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_B2090 NUDIX hydrolase; NUDIX hydrolase 1591879..1592304 Burkholderia cenocepacia AU 1054 4094835 YP_624224.1 CDS Bcen_4366 NC_008061.1 1592369 1592719 D KEGG: bur:Bcep18194_B2091 hypothetical protein; hypothetical protein 1592369..1592719 Burkholderia cenocepacia AU 1054 4094836 YP_624225.1 CDS Bcen_4367 NC_008061.1 1592694 1592963 R hypothetical protein complement(1592694..1592963) Burkholderia cenocepacia AU 1054 4094837 YP_624226.1 CDS Bcen_4368 NC_008061.1 1592938 1593717 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: eca:ECA4053 short chain dehydrogenase; short chain dehydrogenase complement(1592938..1593717) Burkholderia cenocepacia AU 1054 4094838 YP_624227.1 CDS Bcen_4369 NC_008061.1 1593717 1594088 R KEGG: eca:ECA4052 hypothetical protein; hypothetical protein complement(1593717..1594088) Burkholderia cenocepacia AU 1054 4094839 YP_624228.1 CDS Bcen_4370 NC_008061.1 1594136 1594489 D PFAM: helix-turn-helix, HxlR type; KEGG: eca:ECA4051 transcriptional regulator; HxlR family transcriptional regulator 1594136..1594489 Burkholderia cenocepacia AU 1054 4094840 YP_624229.1 CDS Bcen_4371 NC_008061.1 1594531 1595871 R PFAM: amino acid permease-associated region; KEGG: ppu:PP2802 amino acid permease family protein; amino acid permease complement(1594531..1595871) Burkholderia cenocepacia AU 1054 4094841 YP_624230.1 CDS Bcen_4372 NC_008061.1 1596003 1596848 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pae:PA3598 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1596003..1596848) Burkholderia cenocepacia AU 1054 4094842 YP_624231.1 CDS Bcen_4373 NC_008061.1 1597024 1597842 D PFAM: regulatory protein, LuxR; KEGG: pfo:Pfl_4558 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1597024..1597842 Burkholderia cenocepacia AU 1054 4094843 YP_624232.1 CDS Bcen_4375 NC_008061.1 1598693 1599739 R PFAM: helix-turn-helix, AraC type; KEGG: mlo:mlr1976 probable transcriptional regulator; AraC family transcriptional regulator complement(1598693..1599739) Burkholderia cenocepacia AU 1054 4094845 YP_624233.1 CDS Bcen_4376 NC_008061.1 1599799 1600854 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: mlo:mll1975 probable cinnamoyl-CoA reductase; NAD-dependent epimerase/dehydratase 1599799..1600854 Burkholderia cenocepacia AU 1054 4094846 YP_624234.1 CDS Bcen_4377 NC_008061.1 1601108 1603033 R TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor, GTP-binding; KEGG: bur:Bcep18194_B2095 translation elongation factor, selenocysteine-specific; selenocysteine-specific translation elongation factor complement(1601108..1603033) Burkholderia cenocepacia AU 1054 4094847 YP_624235.1 CDS Bcen_4379 NC_008061.1 1604546 1605496 R TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: bur:Bcep18194_B2097 formate dehydrogenase accessory protein; formate dehydrogenase accessory protein FdhE complement(1604546..1605496) Burkholderia cenocepacia AU 1054 4094849 YP_624236.1 CDS Bcen_4380 NC_008061.1 1605871 1606497 R TIGRFAM: Formate dehydrogenase, gamma subunit; KEGG: bur:Bcep18194_B2098 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma complement(1605871..1606497) Burkholderia cenocepacia AU 1054 4094850 YP_624237.1 CDS Bcen_4381 NC_008061.1 1606494 1607408 R TIGRFAM: Formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: bur:Bcep18194_B2099 formate dehydrogenase, beta subunit; formate dehydrogenase subunit beta complement(1606494..1607408) Burkholderia cenocepacia AU 1054 4094851 YP_624238.1 CDS Bcen_4382 NC_008061.1 1607419 1609887 R KEGG: bur:Bcep18194_B2100 formate dehydrogenase, alpha subunit, anaerobic TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha, anaerobic complement(1607419..1609887) Burkholderia cenocepacia AU 1054 4094754 YP_624239.1 CDS Bcen_4383 NC_008061.1 1609900 1610490 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: bur:Bcep18194_B2101 molybdopterin oxidoreductase; twin-arginine translocation pathway signal complement(1609900..1610490) Burkholderia cenocepacia AU 1054 4094755 YP_624240.1 CDS Bcen_4384 NC_008061.1 1610633 1611577 D TIGRFAM: ribonuclease BN, ; PFAM: ribonuclease BN; KEGG: bur:Bcep18194_B2102 ribonuclease BN; ribonuclease BN 1610633..1611577 Burkholderia cenocepacia AU 1054 4094756 YP_624241.1 CDS Bcen_4385 NC_008061.1 1611994 1613151 D PFAM: porin, Gram-negative type; KEGG: bte:BTH_II0702 outer membrane porin OpcP; porin 1611994..1613151 Burkholderia cenocepacia AU 1054 4094757 YP_624242.1 CDS Bcen_4386 NC_008061.1 1613543 1614016 D PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bur:Bcep18194_B2104 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 1613543..1614016 Burkholderia cenocepacia AU 1054 4094758 YP_624243.1 CDS Bcen_4388 NC_008061.1 1615319 1615768 R PFAM: histone-like DNA-binding protein; KEGG: bur:Bcep18194_B2106 histone-like DNA-binding protein; histone-like DNA-binding protein complement(1615319..1615768) Burkholderia cenocepacia AU 1054 4094760 YP_624244.1 CDS Bcen_4389 NC_008061.1 1616036 1617154 D PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2107 acyltransferase 3; acyltransferase 3 1616036..1617154 Burkholderia cenocepacia AU 1054 4094761 YP_624245.1 CDS Bcen_4390 NC_008061.1 1617528 1618415 R TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bur:Bcep18194_B2109 UTP--glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase complement(1617528..1618415) Burkholderia cenocepacia AU 1054 4094762 YP_624246.1 CDS Bcen_4391 NC_008061.1 1618646 1618789 R KEGG: hypothetical protein; hypothetical protein complement(1618646..1618789) Burkholderia cenocepacia AU 1054 4094763 YP_624247.1 CDS Bcen_4392 NC_008061.1 1619009 1620184 D PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2110 acyltransferase 3; acyltransferase 3 1619009..1620184 Burkholderia cenocepacia AU 1054 4094764 YP_624248.1 CDS Bcen_4393 NC_008061.1 1620566 1623031 R PFAM: glycosyl transferase, group 1; KEGG: bur:Bcep18194_B2111 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1620566..1623031) Burkholderia cenocepacia AU 1054 4094765 YP_624249.1 CDS Bcen_4394 NC_008061.1 1623028 1624494 R PFAM: polysaccharide biosynthesis protein; KEGG: bur:Bcep18194_B2112 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(1623028..1624494) Burkholderia cenocepacia AU 1054 4094766 YP_624250.1 CDS Bcen_4395 NC_008061.1 1624514 1626730 R KEGG: bur:Bcep18194_B2113 hypothetical protein; hypothetical protein complement(1624514..1626730) Burkholderia cenocepacia AU 1054 4094767 YP_624251.1 CDS Bcen_4396 NC_008061.1 1627260 1628240 D PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2114 acyltransferase 3; acyltransferase 3 1627260..1628240 Burkholderia cenocepacia AU 1054 4094768 YP_624252.1 CDS Bcen_4397 NC_008061.1 1628276 1629322 D TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B2115 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 1628276..1629322 Burkholderia cenocepacia AU 1054 4094769 YP_624253.1 CDS Bcen_4398 NC_008061.1 1629309 1630274 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B2116 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1629309..1630274 Burkholderia cenocepacia AU 1054 4094770 YP_624254.1 CDS Bcen_4399 NC_008061.1 1630395 1631762 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: sme:SMb21167 reverse transcriptasematurase protein; RNA-directed DNA polymerase complement(1630395..1631762) Burkholderia cenocepacia AU 1054 4094771 YP_624255.1 CDS Bcen_4400 NC_008061.1 1631833 1632162 R hypothetical protein complement(1631833..1632162) Burkholderia cenocepacia AU 1054 4094772 YP_624256.1 CDS Bcen_4401 NC_008061.1 1632231 1633421 R catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase complement(1632231..1633421) Burkholderia cenocepacia AU 1054 4094714 YP_624257.1 CDS Bcen_4402 NC_008061.1 1633682 1635214 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(1633682..1635214) Burkholderia cenocepacia AU 1054 4094715 YP_624258.1 CDS Bcen_4403 NC_008061.1 1635266 1635760 R PFAM: Colicin V production protein; KEGG: bur:Bcep18194_B2119 colicin V production protein; colicin V production protein complement(1635266..1635760) Burkholderia cenocepacia AU 1054 4094716 YP_624259.1 CDS Bcen_4404 NC_008061.1 1635768 1636604 R PFAM: Sporulation related; KEGG: bur:Bcep18194_B2120 hypothetical protein; sporulation related protein complement(1635768..1636604) Burkholderia cenocepacia AU 1054 4094717 YP_624260.1 CDS Bcen_4405 NC_008061.1 1636634 1637944 R TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase, middle region; KEGG: bur:Bcep18194_B2121 folylpolyglutamate synthetase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(1636634..1637944) Burkholderia cenocepacia AU 1054 4094718 YP_624261.1 CDS Bcen_4406 NC_008061.1 1638045 1638917 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(1638045..1638917) Burkholderia cenocepacia AU 1054 4094719 YP_624262.1 CDS trpA NC_008061.1 1638982 1639797 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(1638982..1639797) Burkholderia cenocepacia AU 1054 4094720 YP_624263.1 CDS Bcen_4408 NC_008061.1 1639886 1640737 R PFAM: DNA methylase N-4/N-6; KEGG: bur:Bcep18194_B2124 DNA methylase N-4/N-6; DNA methylase N-4/N-6 complement(1639886..1640737) Burkholderia cenocepacia AU 1054 4094721 YP_624264.1 CDS Bcen_4409 NC_008061.1 1640747 1641940 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1640747..1641940) Burkholderia cenocepacia AU 1054 4094722 YP_624265.1 CDS Bcen_4410 NC_008061.1 1641995 1642696 R catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase complement(1641995..1642696) Burkholderia cenocepacia AU 1054 4094723 YP_624266.1 CDS truA NC_008061.1 1642693 1643505 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(1642693..1643505) Burkholderia cenocepacia AU 1054 4094724 YP_624267.1 CDS Bcen_4412 NC_008061.1 1643505 1645631 R KEGG: bur:Bcep18194_B2128 hypothetical protein; hypothetical protein complement(1643505..1645631) Burkholderia cenocepacia AU 1054 4094725 YP_624268.1 CDS flgE NC_008061.1 1646443 1647687 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1646443..1647687 Burkholderia cenocepacia AU 1054 4094726 YP_624269.1 CDS Bcen_4414 NC_008061.1 1647790 1648947 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(1647790..1648947) Burkholderia cenocepacia AU 1054 4094727 YP_624270.1 CDS Bcen_4415 NC_008061.1 1649235 1650302 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(1649235..1650302) Burkholderia cenocepacia AU 1054 4094728 YP_624271.2 CDS leuD NC_008061.1 1650382 1651032 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(1650382..1651032) Burkholderia cenocepacia AU 1054 4094729 YP_624272.1 CDS Bcen_4417 NC_008061.1 1651101 1651247 R PFAM: Entericidin EcnAB; KEGG: entericidin-related protein; entericidin EcnAB complement(1651101..1651247) Burkholderia cenocepacia AU 1054 4094730 YP_624273.1 CDS Bcen_4418 NC_008061.1 1651251 1652660 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(1651251..1652660) Burkholderia cenocepacia AU 1054 4094731 YP_624274.1 CDS Bcen_4419 NC_008061.1 1653012 1653941 R PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO7440 hydrolase; alpha/beta hydrolase complement(1653012..1653941) Burkholderia cenocepacia AU 1054 4094732 YP_624275.1 CDS Bcen_4420 NC_008061.1 1654111 1654716 R PFAM: regulatory protein, TetR; KEGG: atc:AGR_C_3874 TetR-family transcriptional regulator; TetR family transcriptional regulator complement(1654111..1654716) Burkholderia cenocepacia AU 1054 4094733 YP_624276.1 CDS Bcen_4421 NC_008061.1 1654981 1655706 D PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_B2137 glutathione S-transferase-like; glutathione S-transferase 1654981..1655706 Burkholderia cenocepacia AU 1054 4094695 YP_624277.1 CDS Bcen_4422 NC_008061.1 1655759 1657321 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B2141 amino acid transporter; amino acid permease complement(1655759..1657321) Burkholderia cenocepacia AU 1054 4094696 YP_624278.1 CDS Bcen_4423 NC_008061.1 1657424 1657888 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_B2142 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(1657424..1657888) Burkholderia cenocepacia AU 1054 4094697 YP_624279.1 CDS Bcen_4424 NC_008061.1 1657986 1658756 R PFAM: amidinotransferase; KEGG: bur:Bcep18194_B2143 dimethylargininase; dimethylargininase complement(1657986..1658756) Burkholderia cenocepacia AU 1054 4094698 YP_624280.1 CDS Bcen_4425 NC_008061.1 1658953 1660203 R PFAM: protein of unknown function DUF1479; KEGG: bur:Bcep18194_B2144 protein of unknown function DUF1479; hypothetical protein complement(1658953..1660203) Burkholderia cenocepacia AU 1054 4094699 YP_624281.1 CDS Bcen_4426 NC_008061.1 1660314 1660703 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B2145 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1660314..1660703) Burkholderia cenocepacia AU 1054 4094700 YP_624282.1 CDS Bcen_4427 NC_008061.1 1660774 1661751 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B2146 transcriptional regulator, AraC family; AraC family transcriptional regulator 1660774..1661751 Burkholderia cenocepacia AU 1054 4094701 YP_624283.1 CDS gltA NC_008061.1 1661842 1663143 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(1661842..1663143) Burkholderia cenocepacia AU 1054 4094702 YP_624284.1 CDS Bcen_4429 NC_008061.1 1663210 1663482 R PFAM: protein of unknown function DUF339; KEGG: bur:Bcep18194_B2148 protein of unknown function DUF339; hypothetical protein complement(1663210..1663482) Burkholderia cenocepacia AU 1054 4094703 YP_624285.1 CDS sdhB NC_008061.1 1663489 1664190 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(1663489..1664190) Burkholderia cenocepacia AU 1054 4094704 YP_624286.1 CDS sdhA NC_008061.1 1664213 1665988 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(1664213..1665988) Burkholderia cenocepacia AU 1054 4094705 YP_624287.1 CDS Bcen_4432 NC_008061.1 1665992 1666360 R PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: bur:Bcep18194_B2151 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b subunit complement(1665992..1666360) Burkholderia cenocepacia AU 1054 4094706 YP_624288.1 CDS Bcen_4433 NC_008061.1 1666365 1666781 R PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: bur:Bcep18194_B2152 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b subunit complement(1666365..1666781) Burkholderia cenocepacia AU 1054 4094707 YP_624289.1 CDS Bcen_4434 NC_008061.1 1666950 1667774 R PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B2153 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(1666950..1667774) Burkholderia cenocepacia AU 1054 4094708 YP_624290.1 CDS Bcen_4435 NC_008061.1 1668063 1669049 D catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 1668063..1669049 Burkholderia cenocepacia AU 1054 4094709 YP_624291.1 CDS Bcen_4436 NC_008061.1 1669106 1670242 D PFAM: HpcH/HpaI aldolase; KEGG: bur:Bcep18194_B2155 citrate lyase beta subunit-like; HpcH/HpaI aldolase 1669106..1670242 Burkholderia cenocepacia AU 1054 4094710 YP_624292.1 CDS Bcen_4437 NC_008061.1 1670473 1670988 D KEGG: bur:Bcep18194_B2156 hypothetical protein; hypothetical protein 1670473..1670988 Burkholderia cenocepacia AU 1054 4094711 YP_624293.1 CDS prpD NC_008061.1 1671007 1672458 D functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 1671007..1672458 Burkholderia cenocepacia AU 1054 4094712 YP_624294.1 CDS acnA NC_008061.1 1672511 1675228 D catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1672511..1675228 Burkholderia cenocepacia AU 1054 4094713 YP_624295.1 CDS Bcen_4440 NC_008061.1 1675406 1675849 R KEGG: bur:Bcep18194_B2159 hypothetical protein; hypothetical protein complement(1675406..1675849) Burkholderia cenocepacia AU 1054 4094655 YP_624296.1 CDS Bcen_4441 NC_008061.1 1675846 1676277 R PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: bur:Bcep18194_B2160 hypothetical protein; activator of Hsp90 ATPase-like complement(1675846..1676277) Burkholderia cenocepacia AU 1054 4094656 YP_624297.1 CDS Bcen_4442 NC_008061.1 1676277 1676600 R PFAM: regulatory protein, ArsR; KEGG: bur:Bcep18194_B2161 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(1676277..1676600) Burkholderia cenocepacia AU 1054 4094657 YP_624298.1 CDS Bcen_4443 NC_008061.1 1677246 1678979 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: bur:Bcep18194_B2163 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 1677246..1678979 Burkholderia cenocepacia AU 1054 4094658 YP_624299.1 CDS Bcen_4444 NC_008061.1 1679044 1680405 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2166 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1679044..1680405) Burkholderia cenocepacia AU 1054 4094659 YP_624300.1 CDS Bcen_4445 NC_008061.1 1680826 1681671 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2167 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1680826..1681671) Burkholderia cenocepacia AU 1054 4094660 YP_624301.1 CDS Bcen_4446 NC_008061.1 1681700 1682956 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2168 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1681700..1682956) Burkholderia cenocepacia AU 1054 4094661 YP_624302.1 CDS Bcen_4447 NC_008061.1 1683068 1684114 R PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_B2169 ABC spermidine/putrescine transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(1683068..1684114) Burkholderia cenocepacia AU 1054 4094662 YP_624303.1 CDS Bcen_4448 NC_008061.1 1684192 1685304 R KEGG: bur:Bcep18194_B2170 spermidine/putrescine ABC transporter ATPase subunit TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: ATPase; spermidine/putrescine ABC transporter ATP-binding subunit complement(1684192..1685304) Burkholderia cenocepacia AU 1054 4094663 YP_624304.1 CDS Bcen_4449 NC_008061.1 1685412 1686935 D PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B2171 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator 1685412..1686935 Burkholderia cenocepacia AU 1054 4094664 YP_624305.1 CDS Bcen_4450 NC_008061.1 1686966 1688000 R acts as a molecular chaperone to fold and export lipase A; lipase chaperone complement(1686966..1688000) Burkholderia cenocepacia AU 1054 4094665 YP_624306.1 CDS Bcen_4451 NC_008061.1 1688004 1689098 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2173 triacylglycerol lipase; triacylglycerol lipase complement(1688004..1689098) Burkholderia cenocepacia AU 1054 4094666 YP_624307.1 CDS Bcen_4452 NC_008061.1 1689318 1691450 R TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; KEGG: bur:Bcep18194_B2174 TonB-dependent copper receptor; TonB-dependent copper receptor complement(1689318..1691450) Burkholderia cenocepacia AU 1054 4094667 YP_624308.1 CDS Bcen_4453 NC_008061.1 1691535 1691903 R KEGG: bur:Bcep18194_B2175 hypothetical protein; hypothetical protein complement(1691535..1691903) Burkholderia cenocepacia AU 1054 4094668 YP_624309.1 CDS Bcen_4454 NC_008061.1 1692059 1692595 R PFAM: cytochrome B561; KEGG: bur:Bcep18194_B2176 cytochrome b561; cytochrome B561 complement(1692059..1692595) Burkholderia cenocepacia AU 1054 4094669 YP_624310.1 CDS Bcen_4455 NC_008061.1 1692750 1693460 D KEGG: bur:Bcep18194_B2177 hypothetical protein; hypothetical protein 1692750..1693460 Burkholderia cenocepacia AU 1054 4094670 YP_624311.1 CDS Bcen_4456 NC_008061.1 1693526 1694260 R PFAM: Peptidoglycan-binding LysM; KEGG: bur:Bcep18194_B2178 peptidase M23B; peptidase M23B complement(1693526..1694260) Burkholderia cenocepacia AU 1054 4094671 YP_624312.1 CDS Bcen_4457 NC_008061.1 1694671 1694991 D KEGG: bur:Bcep18194_B2179 hypothetical protein; hypothetical protein 1694671..1694991 Burkholderia cenocepacia AU 1054 4094672 YP_624313.1 CDS Bcen_4458 NC_008061.1 1695101 1695445 R KEGG: bur:Bcep18194_B2180 hypothetical protein; hypothetical protein complement(1695101..1695445) Burkholderia cenocepacia AU 1054 4094673 YP_624314.1 CDS Bcen_4459 NC_008061.1 1695646 1697058 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(1695646..1697058) Burkholderia cenocepacia AU 1054 4094674 YP_624315.1 CDS Bcen_4460 NC_008061.1 1697156 1697797 R PFAM: protein of unknown function DUF938; KEGG: bur:Bcep18194_B2182 protein of unknown function DUF938; hypothetical protein complement(1697156..1697797) Burkholderia cenocepacia AU 1054 4094636 YP_624316.1 CDS Bcen_4461 NC_008061.1 1697794 1698882 R Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase complement(1697794..1698882) Burkholderia cenocepacia AU 1054 4094637 YP_624317.1 CDS Bcen_4462 NC_008061.1 1699927 1700886 D PFAM: luciferase-like; KEGG: bur:Bcep18194_B2188 flavin-dependent oxidoreductase; luciferase-like protein 1699927..1700886 Burkholderia cenocepacia AU 1054 4094638 YP_624318.1 CDS Bcen_4463 NC_008061.1 1701157 1703625 D PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_B2189 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel 1701157..1703625 Burkholderia cenocepacia AU 1054 4094639 YP_624319.1 CDS Bcen_4464 NC_008061.1 1703653 1704489 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B2190 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1703653..1704489) Burkholderia cenocepacia AU 1054 4094640 YP_624320.1 CDS Bcen_4465 NC_008061.1 1704581 1705705 D PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_B2191 secretion protein, HlyD family; secretion protein HlyD 1704581..1705705 Burkholderia cenocepacia AU 1054 4094641 YP_624321.1 CDS Bcen_4466 NC_008061.1 1705698 1707284 D TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2192 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 1705698..1707284 Burkholderia cenocepacia AU 1054 4094642 YP_624322.1 CDS Bcen_4467 NC_008061.1 1707298 1708785 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2193 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT 1707298..1708785 Burkholderia cenocepacia AU 1054 4094643 YP_624323.1 CDS Bcen_4468 NC_008061.1 1709021 1710556 D PFAM: Catalase-like; KEGG: bur:Bcep18194_B2194 catalase; catalase 1709021..1710556 Burkholderia cenocepacia AU 1054 4094644 YP_624324.1 CDS Bcen_4469 NC_008061.1 1710636 1711247 D PFAM: Ankyrin; KEGG: bur:Bcep18194_B2195 ankyrin repeat protein; ankyrin 1710636..1711247 Burkholderia cenocepacia AU 1054 4094645 YP_624325.1 CDS Bcen_4470 NC_008061.1 1711652 1712812 D PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_C6825 secretion protein HlyD family; secretion protein HlyD 1711652..1712812 Burkholderia cenocepacia AU 1054 4094646 YP_624326.1 CDS Bcen_4471 NC_008061.1 1712833 1715976 D TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_C6824 hydrophobe/amphiphile efflux pump; hydrophobe/amphiphile efflux protein 1712833..1715976 Burkholderia cenocepacia AU 1054 4094647 YP_624327.1 CDS Bcen_4472 NC_008061.1 1715981 1717411 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_C6823 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT 1715981..1717411 Burkholderia cenocepacia AU 1054 4094648 YP_624328.1 CDS Bcen_4473 NC_008061.1 1717513 1718205 D PFAM: response regulator receiver; KEGG: bur:Bcep18194_C6822 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1717513..1718205 Burkholderia cenocepacia AU 1054 4094649 YP_624329.1 CDS Bcen_4474 NC_008061.1 1718202 1718828 D PFAM: histidine kinase, HAMP region; KEGG: bja:bll3558 two-component hybrid sensor and regulator; histidine kinase, HAMP region 1718202..1718828 Burkholderia cenocepacia AU 1054 4094650 YP_624330.1 CDS Bcen_4475 NC_008061.1 1719459 1721291 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: bur:Bcep18194_B2199 pseudomonalisin; pseudomonalisin 1719459..1721291 Burkholderia cenocepacia AU 1054 4094651 YP_624331.1 CDS Bcen_4476 NC_008061.1 1721744 1723426 D KEGG: bur:Bcep18194_B2200 hypothetical protein; hypothetical protein 1721744..1723426 Burkholderia cenocepacia AU 1054 4094652 YP_624332.1 CDS Bcen_4477 NC_008061.1 1723496 1724065 R KEGG: bur:Bcep18194_B2201 flavin-nucleotide-binding protein; flavin-nucleotide-binding protein complement(1723496..1724065) Burkholderia cenocepacia AU 1054 4094653 YP_624333.1 CDS Bcen_4478 NC_008061.1 1724381 1725847 D PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B2202 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator 1724381..1725847 Burkholderia cenocepacia AU 1054 4094654 YP_624334.1 CDS Bcen_4479 NC_008061.1 1725855 1727405 R PFAM: phospholipase D/Transphosphatidylase; KEGG: bur:Bcep18194_B2203 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase complement(1725855..1727405) Burkholderia cenocepacia AU 1054 4094540 YP_624335.1 CDS Bcen_4480 NC_008061.1 1727880 1730297 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(1727880..1730297) Burkholderia cenocepacia AU 1054 4094542 YP_624336.1 CDS dnaG NC_008061.1 1730386 1732788 R synthesizes RNA primers at the replication forks; DNA primase complement(1730386..1732788) Burkholderia cenocepacia AU 1054 4094543 YP_624337.1 CDS rpsU NC_008061.1 1732976 1733188 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(1732976..1733188) Burkholderia cenocepacia AU 1054 4094544 YP_624338.1 CDS Bcen_4483 NC_008061.1 1733293 1734513 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein-like; KEGG: bur:Bcep18194_B2208 HI0933-like flavoprotein; HI0933-like protein complement(1733293..1734513) Burkholderia cenocepacia AU 1054 4094545 YP_624339.1 CDS Bcen_4484 NC_008061.1 1734644 1735684 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 1734644..1735684 Burkholderia cenocepacia AU 1054 4094546 YP_624340.1 CDS Bcen_4485 NC_008061.1 1735779 1736588 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase complement(1735779..1736588) Burkholderia cenocepacia AU 1054 4094547 YP_624341.1 CDS Bcen_4486 NC_008061.1 1736743 1738683 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(1736743..1738683) Burkholderia cenocepacia AU 1054 4094548 YP_624342.1 CDS Bcen_4487 NC_008061.1 1738729 1739613 R PFAM: Polyprenyl synthetase; KEGG: bur:Bcep18194_B2212 polyprenyl synthetase; polyprenyl synthetase complement(1738729..1739613) Burkholderia cenocepacia AU 1054 4094549 YP_624343.1 CDS Bcen_4488 NC_008061.1 1739610 1739903 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(1739610..1739903) Burkholderia cenocepacia AU 1054 4094550 YP_624344.1 CDS Bcen_4489 NC_008061.1 1740173 1741279 D PFAM: Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_B2214 Rieske (2Fe-2S) protein; Rieske (2Fe-2S) protein 1740173..1741279 Burkholderia cenocepacia AU 1054 4094551 YP_624345.1 CDS Bcen_4490 NC_008061.1 1741397 1742266 D PFAM: Rhodanese-like; KEGG: bur:Bcep18194_B2215 3-mercaptopyruvate sulfurtransferase; 3-mercaptopyruvate sulfurtransferase 1741397..1742266 Burkholderia cenocepacia AU 1054 4094552 YP_624346.1 CDS Bcen_4491 NC_008061.1 1742351 1743226 R KEGG: bur:Bcep18194_B2216 dienelactone hydrolase TIGRFAM: Twin-arginine translocation pathway signal; PFAM: dienelactone hydrolase; twin-arginine translocation pathway signal complement(1742351..1743226) Burkholderia cenocepacia AU 1054 4094553 YP_624347.1 CDS Bcen_4492 NC_008061.1 1743598 1744932 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2217 NADH dehydrogenase; NADH dehydrogenase complement(1743598..1744932) Burkholderia cenocepacia AU 1054 4094554 YP_624348.1 CDS Bcen_4493 NC_008061.1 1745210 1747963 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(1745210..1747963) Burkholderia cenocepacia AU 1054 4094555 YP_624349.1 CDS Bcen_4494 NC_008061.1 1747965 1748723 D PFAM: conserved hypothetical protein 730; KEGG: bur:Bcep18194_B2219 hypothetical protein; hypothetical protein 1747965..1748723 Burkholderia cenocepacia AU 1054 4094556 YP_624350.1 CDS Bcen_4495 NC_008061.1 1748856 1749392 D KEGG: bur:Bcep18194_B2220 hypothetical protein; hypothetical protein 1748856..1749392 Burkholderia cenocepacia AU 1054 4094557 YP_624351.2 CDS Bcen_4496 NC_008061.1 1749515 1751041 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(1749515..1751041) Burkholderia cenocepacia AU 1054 4094558 YP_624352.1 CDS Bcen_4497 NC_008061.1 1751666 1752664 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 1751666..1752664 Burkholderia cenocepacia AU 1054 4094468 YP_624353.1 CDS Bcen_4498 NC_008061.1 1752655 1753464 D KEGG: bur:Bcep18194_B2230 hypothetical protein; hypothetical protein 1752655..1753464 Burkholderia cenocepacia AU 1054 4094469 YP_624354.1 CDS Bcen_4499 NC_008061.1 1753653 1754105 D PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B2231 transcriptional regulator, MarR family; MarR family transcriptional regulator 1753653..1754105 Burkholderia cenocepacia AU 1054 4094470 YP_624355.1 CDS Bcen_4500 NC_008061.1 1754262 1754681 D PFAM: OsmC-like protein; KEGG: bur:Bcep18194_B2232 OsmC-like protein; OsmC-like protein 1754262..1754681 Burkholderia cenocepacia AU 1054 4094471 YP_624356.1 CDS Bcen_4501 NC_008061.1 1754797 1754973 R KEGG: bur:Bcep18194_B2233 hypothetical protein; hypothetical protein complement(1754797..1754973) Burkholderia cenocepacia AU 1054 4094472 YP_624357.1 CDS Bcen_4502 NC_008061.1 1755054 1756151 R TIGRFAM: Esterase, PHB depolymerase; KEGG: bur:Bcep18194_B2234 esterase, PHB depolymerase; esterase complement(1755054..1756151) Burkholderia cenocepacia AU 1054 4094473 YP_624358.1 CDS Bcen_4503 NC_008061.1 1756410 1757108 D PFAM: phosphoesterase, PA-phosphatase related; KEGG: bur:Bcep18194_B2235 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 1756410..1757108 Burkholderia cenocepacia AU 1054 4094474 YP_624359.1 CDS Bcen_4504 NC_008061.1 1757162 1758031 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_B2236 molybdenum ABC transporter, periplasmic binding protein; molybdenum ABC transporter, periplasmic molybdate-binding protein 1757162..1758031 Burkholderia cenocepacia AU 1054 4094475 YP_624360.1 CDS Bcen_4505 NC_008061.1 1758042 1758719 D TIGRFAM: Molybdate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2237 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter permease 1758042..1758719 Burkholderia cenocepacia AU 1054 4094476 YP_624361.1 CDS Bcen_4506 NC_008061.1 1758784 1759485 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B2238 ABC molybdate transporter, ATPase subunit; ABC transporter 1758784..1759485 Burkholderia cenocepacia AU 1054 4094477 YP_624362.1 CDS Bcen_4507 NC_008061.1 1759646 1760491 R TIGRFAM: molybdenum-pterin binding domain; PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2239 transcriptional regulator, ModE family; ModE family transcriptional regulator complement(1759646..1760491) Burkholderia cenocepacia AU 1054 4094478 YP_624363.1 CDS Bcen_4508 NC_008061.1 1760536 1762158 R PFAM: CHAD; KEGG: bur:Bcep18194_B2240 conserved hypothetical protein, CHAD family; CHAD domain-containing protein complement(1760536..1762158) Burkholderia cenocepacia AU 1054 4094479 YP_624364.1 CDS Bcen_4509 NC_008061.1 1762298 1762681 R PFAM: 4-oxalocrotonate tautomerase; KEGG: bur:Bcep18194_B2241 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(1762298..1762681) Burkholderia cenocepacia AU 1054 4094480 YP_624365.1 CDS Bcen_4510 NC_008061.1 1762795 1763652 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2242 transcriptional regulator, LysR family; LysR family transcriptional regulator 1762795..1763652 Burkholderia cenocepacia AU 1054 4094481 YP_624366.1 CDS Bcen_4511 NC_008061.1 1763687 1764616 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_B2243 protein of unknown function DUF6, transmembrane; hypothetical protein 1763687..1764616 Burkholderia cenocepacia AU 1054 4094482 YP_624367.1 CDS Bcen_4512 NC_008061.1 1764684 1765463 D PFAM: histidine kinase A-like; KEGG: bur:Bcep18194_B2244 histidine kinase; histidine kinase 1764684..1765463 Burkholderia cenocepacia AU 1054 4094483 YP_624368.1 CDS Bcen_4513 NC_008061.1 1765540 1766883 D PFAM: CBS; KEGG: bur:Bcep18194_B2245 hypothetical protein; hypothetical protein 1765540..1766883 Burkholderia cenocepacia AU 1054 4094484 YP_624369.1 CDS Bcen_4514 NC_008061.1 1766906 1767490 D PFAM: thiamine monophosphate synthase; KEGG: bur:Bcep18194_B2246 thiamine monophosphate synthase; thiamine monophosphate synthase 1766906..1767490 Burkholderia cenocepacia AU 1054 4094485 YP_624370.1 CDS Bcen_4515 NC_008061.1 1767563 1769215 R PFAM: glycoside hydrolase, family 13-like; KEGG: bur:Bcep18194_B2247 glycoside hydrolase, family 13-like; glycoside hydrolase family protein complement(1767563..1769215) Burkholderia cenocepacia AU 1054 4094486 YP_624371.1 CDS Bcen_4516 NC_008061.1 1769531 1770238 D PFAM: Methyltransferase type 11; KEGG: bur:Bcep18194_B2248 hypothetical protein; methyltransferase type 11 1769531..1770238 Burkholderia cenocepacia AU 1054 4094428 YP_624372.1 CDS Bcen_4517 NC_008061.1 1770303 1771004 D PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_B2249 glutathione S-transferase-like; glutathione S-transferase 1770303..1771004 Burkholderia cenocepacia AU 1054 4094429 YP_624373.1 CDS Bcen_4518 NC_008061.1 1771011 1771664 R PFAM: protein of unknown function DUF1345; KEGG: bur:Bcep18194_B2250 protein of unknown function DUF1345; hypothetical protein complement(1771011..1771664) Burkholderia cenocepacia AU 1054 4094430 YP_624374.1 CDS Bcen_4519 NC_008061.1 1771798 1772529 D PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_B2251 metallophosphoesterase; metallophosphoesterase 1771798..1772529 Burkholderia cenocepacia AU 1054 4094431 YP_624375.1 CDS Bcen_4520 NC_008061.1 1772590 1773291 R KEGG: bur:Bcep18194_B2252 hypothetical protein; hypothetical protein complement(1772590..1773291) Burkholderia cenocepacia AU 1054 4094432 YP_624376.1 CDS Bcen_4521 NC_008061.1 1773288 1773707 R KEGG: bur:Bcep18194_B2253 hypothetical protein; hypothetical protein complement(1773288..1773707) Burkholderia cenocepacia AU 1054 4094433 YP_624377.1 CDS Bcen_4522 NC_008061.1 1773942 1774724 D TIGRFAM: Lysine-arginine-ornithine-binding periplasmic protein; PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_B2254 ABC amino acid transporter, periplasmic ligand binding protein; lysine-arginine-ornithine-binding periplasmic protein 1773942..1774724 Burkholderia cenocepacia AU 1054 4094434 YP_624378.1 CDS Bcen_4523 NC_008061.1 1774812 1775372 D hypothetical protein 1774812..1775372 Burkholderia cenocepacia AU 1054 4094435 YP_624379.1 CDS Bcen_4524 NC_008061.1 1775809 1776195 D PFAM: GtrA-like protein; KEGG: bur:Bcep18194_B2257 GtrA-like protein; GtrA-like protein 1775809..1776195 Burkholderia cenocepacia AU 1054 4094436 YP_624380.1 CDS Bcen_4525 NC_008061.1 1776233 1777723 R PFAM: sigma-54 factor, interaction region; SMART: ATPase; KEGG: bur:Bcep18194_B2258 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator complement(1776233..1777723) Burkholderia cenocepacia AU 1054 4094437 YP_624381.1 CDS Bcen_4526 NC_008061.1 1778179 1779096 R KEGG: bur:Bcep18194_B2259 metal-dependent hydrolase-like; metal-dependent hydrolase-like complement(1778179..1779096) Burkholderia cenocepacia AU 1054 4094438 YP_624382.1 CDS Bcen_4527 NC_008061.1 1779676 1780017 D PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: bur:Bcep18194_B2261 peptidylprolyl isomerase; peptidyl-prolyl isomerase 1779676..1780017 Burkholderia cenocepacia AU 1054 4094439 YP_624383.1 CDS Bcen_4528 NC_008061.1 1780043 1780816 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B2262 transcriptional regulator, AraC family; AraC family transcriptional regulator 1780043..1780816 Burkholderia cenocepacia AU 1054 4094440 YP_624384.1 CDS Bcen_4529 NC_008061.1 1780876 1781319 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4257 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1780876..1781319) Burkholderia cenocepacia AU 1054 4094441 YP_624385.1 CDS Bcen_4530 NC_008061.1 1781434 1782900 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2263 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1781434..1782900 Burkholderia cenocepacia AU 1054 4094442 YP_624386.1 CDS Bcen_4532 NC_008061.1 1783125 1783595 R PFAM: helix-turn-helix, HxlR type; KEGG: bur:Bcep18194_B2265 transcriptional regulator; HxlR family transcriptional regulator complement(1783125..1783595) Burkholderia cenocepacia AU 1054 4094444 YP_624387.1 CDS Bcen_4533 NC_008061.1 1783748 1784983 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2266 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1783748..1784983 Burkholderia cenocepacia AU 1054 4094445 YP_624388.1 CDS Bcen_4534 NC_008061.1 1785305 1786471 R PFAM: glycosyl transferase, group 1; KEGG: bur:Bcep18194_B2267 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1785305..1786471) Burkholderia cenocepacia AU 1054 4094446 YP_624389.1 CDS Bcen_4535 NC_008061.1 1786471 1787655 R PFAM: glycosyl transferase, group 1; KEGG: bur:Bcep18194_B2268 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1786471..1787655) Burkholderia cenocepacia AU 1054 4094447 YP_624390.1 CDS Bcen_4536 NC_008061.1 1787652 1789118 R KEGG: bur:Bcep18194_B2269 hypothetical protein; hypothetical protein complement(1787652..1789118) Burkholderia cenocepacia AU 1054 4094409 YP_624391.1 CDS Bcen_4537 NC_008061.1 1789129 1790274 R KEGG: bur:Bcep18194_B2270 glycosyltransferase-like; glycosyltransferase-like complement(1789129..1790274) Burkholderia cenocepacia AU 1054 4094410 YP_624392.1 CDS Bcen_4538 NC_008061.1 1790318 1791277 R PFAM: glycosyl transferase, family 2; KEGG: bur:Bcep18194_B2271 glycosyl transferase, family 2; glycosyl transferase family protein complement(1790318..1791277) Burkholderia cenocepacia AU 1054 4094411 YP_624393.1 CDS Bcen_4539 NC_008061.1 1791340 1793565 R PFAM: lipopolysaccharide biosynthesis; KEGG: bur:Bcep18194_B2272 protein-tyrosine kinase; protein-tyrosine kinase complement(1791340..1793565) Burkholderia cenocepacia AU 1054 4094412 YP_624394.1 CDS Bcen_4540 NC_008061.1 1793616 1794779 R PFAM: polysaccharide export protein; KEGG: bur:Bcep18194_B2273 polysaccharide export protein; polysaccharide export protein complement(1793616..1794779) Burkholderia cenocepacia AU 1054 4094413 YP_624395.1 CDS Bcen_4541 NC_008061.1 1794788 1795231 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bur:Bcep18194_B2274 protein tyrosine phosphatase; protein tyrosine phosphatase complement(1794788..1795231) Burkholderia cenocepacia AU 1054 4094414 YP_624396.1 CDS Bcen_4542 NC_008061.1 1795262 1796674 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: bur:Bcep18194_B2275 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase complement(1795262..1796674) Burkholderia cenocepacia AU 1054 4094415 YP_624397.1 CDS Bcen_4543 NC_008061.1 1796750 1798186 R PFAM: sugar transferase; KEGG: bur:Bcep18194_B2276 sugar transferase; sugar transferase complement(1796750..1798186) Burkholderia cenocepacia AU 1054 4094416 YP_624398.1 CDS Bcen_4544 NC_008061.1 1798555 1800111 D KEGG: bur:Bcep18194_B2277 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1798555..1800111 Burkholderia cenocepacia AU 1054 4094417 YP_624399.1 CDS Bcen_4545 NC_008061.1 1800230 1801171 R KEGG: bur:Bcep18194_B2278 hypothetical protein; hypothetical protein complement(1800230..1801171) Burkholderia cenocepacia AU 1054 4094418 YP_624400.1 CDS Bcen_4546 NC_008061.1 1801907 1802488 R KEGG: bur:Bcep18194_B2279 hypothetical protein; hypothetical protein complement(1801907..1802488) Burkholderia cenocepacia AU 1054 4094419 YP_624401.1 CDS Bcen_4547 NC_008061.1 1802518 1803855 R KEGG: bur:Bcep18194_B2280 Fe-S oxidoreductase-like; Fe-S oxidoreductase-like protein complement(1802518..1803855) Burkholderia cenocepacia AU 1054 4094420 YP_624402.1 CDS Bcen_4548 NC_008061.1 1803980 1804402 R PFAM: Rubrerythrin; KEGG: bur:Bcep18194_B2281 rubrerythrin; rubrerythrin complement(1803980..1804402) Burkholderia cenocepacia AU 1054 4094421 YP_624403.1 CDS Bcen_4549 NC_008061.1 1804664 1805932 R PFAM: sigma-70 region 2; KEGG: bur:Bcep18194_B2282 sigma factor; RNA polymerase ECF-subfamily sigma factor complement(1804664..1805932) Burkholderia cenocepacia AU 1054 4094422 YP_624404.1 CDS Bcen_4550 NC_008061.1 1805929 1806345 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B2283 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1805929..1806345) Burkholderia cenocepacia AU 1054 4094423 YP_624405.1 CDS Bcen_4551 NC_008061.1 1806372 1806791 R PFAM: DGPFAETKE; KEGG: bur:Bcep18194_B2284 hypothetical protein; hypothetical protein complement(1806372..1806791) Burkholderia cenocepacia AU 1054 4094424 YP_624406.1 CDS Bcen_4552 NC_008061.1 1806917 1807270 R PFAM: DGPFAETKE; KEGG: bur:Bcep18194_B2285 hypothetical protein; hypothetical protein complement(1806917..1807270) Burkholderia cenocepacia AU 1054 4094425 YP_624407.1 CDS Bcen_4553 NC_008061.1 1807477 1809339 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bur:Bcep18194_B2286 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 1807477..1809339 Burkholderia cenocepacia AU 1054 4094426 YP_624408.1 CDS Bcen_4554 NC_008061.1 1809637 1810023 D PFAM: protein of unknown function DUF883, ElaB; KEGG: bur:Bcep18194_B2287 protein of unknown function DUF883, ElaB; hypothetical protein 1809637..1810023 Burkholderia cenocepacia AU 1054 4094427 YP_624409.1 CDS Bcen_4555 NC_008061.1 1810083 1810667 D KEGG: bur:Bcep18194_B2288 hypothetical protein; hypothetical protein 1810083..1810667 Burkholderia cenocepacia AU 1054 4094369 YP_624410.1 CDS Bcen_4556 NC_008061.1 1810759 1811955 D PFAM: protein of unknown function UPF0118; KEGG: bur:Bcep18194_B2289 protein of unknown function UPF0118; hypothetical protein 1810759..1811955 Burkholderia cenocepacia AU 1054 4094370 YP_624411.1 CDS Bcen_4557 NC_008061.1 1811999 1812511 R KEGG: bur:Bcep18194_B2290 hypothetical protein; hypothetical protein complement(1811999..1812511) Burkholderia cenocepacia AU 1054 4094371 YP_624412.1 CDS Bcen_4558 NC_008061.1 1812707 1813723 R PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B2291 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase complement(1812707..1813723) Burkholderia cenocepacia AU 1054 4094372 YP_624413.1 CDS Bcen_4559 NC_008061.1 1813761 1814549 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B2292 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(1813761..1814549) Burkholderia cenocepacia AU 1054 4094373 YP_624414.1 CDS Bcen_4560 NC_008061.1 1815022 1815612 R PFAM: phosphoesterase, PA-phosphatase related; KEGG: bur:Bcep18194_B2293 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase complement(1815022..1815612) Burkholderia cenocepacia AU 1054 4094374 YP_624415.1 CDS Bcen_4561 NC_008061.1 1815693 1817009 R TIGRFAM: NRAMP family Mn2+/Fe2+ transporters; PFAM: natural resistance-associated macrophage protein; KEGG: bur:Bcep18194_B2294 Mn2+ and Fe2+ transporters of the NRAMP family; manganese transport protein MntH complement(1815693..1817009) Burkholderia cenocepacia AU 1054 4094375 YP_624416.1 CDS Bcen_4562 NC_008061.1 1816958 1818040 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B2295 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1816958..1818040) Burkholderia cenocepacia AU 1054 4094376 YP_624417.1 CDS Bcen_4563 NC_008061.1 1818518 1819441 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2296 transcriptional regulator, LysR family; LysR family transcriptional regulator 1818518..1819441 Burkholderia cenocepacia AU 1054 4094377 YP_624418.1 CDS Bcen_4564 NC_008061.1 1819539 1819940 D PFAM: OsmC-like protein; KEGG: bur:Bcep18194_B2297 OsmC-like protein; OsmC-like protein 1819539..1819940 Burkholderia cenocepacia AU 1054 4094378 YP_624419.1 CDS Bcen_4565 NC_008061.1 1820045 1820926 R PFAM: Dyp-type peroxidase; KEGG: bur:Bcep18194_B2298 Dyp-type peroxidase; Dyp-type peroxidase complement(1820045..1820926) Burkholderia cenocepacia AU 1054 4094379 YP_624420.1 CDS Bcen_4566 NC_008061.1 1821419 1823281 D PFAM: ABC transporter, transmembrane region; SMART: ATPase; KEGG: bur:Bcep18194_B2299 ABC efflux pump, fused ATPase and inner membrane subunits; ABC transporter related 1821419..1823281 Burkholderia cenocepacia AU 1054 4094380 YP_624421.1 CDS Bcen_4567 NC_008061.1 1823299 1823916 D PFAM: GCN5-related N-acetyltransferase; KEGG: ava:Ava_B0060 hypothetical protein; N-acetyltransferase GCN5 1823299..1823916 Burkholderia cenocepacia AU 1054 4094381 YP_624422.1 CDS Bcen_4568 NC_008061.1 1824075 1824788 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1824075..1824788 Burkholderia cenocepacia AU 1054 4094382 YP_624423.1 CDS Bcen_4569 NC_008061.1 1824807 1825451 R hypothetical protein complement(1824807..1825451) Burkholderia cenocepacia AU 1054 4094383 YP_624424.1 CDS Bcen_4570 NC_008061.1 1825472 1826713 R PFAM: Cl- channel, voltage gated; KEGG: bur:Bcep18194_B2302 Cl-channel, voltage gated; Cl- channel, voltage gated complement(1825472..1826713) Burkholderia cenocepacia AU 1054 4094384 YP_624425.1 CDS Bcen_4571 NC_008061.1 1826977 1827996 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(1826977..1827996) Burkholderia cenocepacia AU 1054 4094385 YP_624426.1 CDS Bcen_4572 NC_008061.1 1827993 1830302 R PFAM: response regulator receiver; KEGG: bur:Bcep18194_B2304 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase complement(1827993..1830302) Burkholderia cenocepacia AU 1054 4094386 YP_624427.1 CDS Bcen_4573 NC_008061.1 1830299 1831000 R PFAM: CheW-like protein; KEGG: bur:Bcep18194_B2305 CheW protein; CheW protein complement(1830299..1831000) Burkholderia cenocepacia AU 1054 4094387 YP_624428.1 CDS Bcen_4574 NC_008061.1 1831000 1831440 R hypothetical protein complement(1831000..1831440) Burkholderia cenocepacia AU 1054 4094388 YP_624429.1 CDS Bcen_4575 NC_008061.1 1831471 1832889 R PFAM: MCP methyltransferase, CheR-type; KEGG: bur:Bcep18194_B2306 MCP methyltransferase, CheR-type; chemotaxis protein CheR complement(1831471..1832889) Burkholderia cenocepacia AU 1054 4094331 YP_624430.1 CDS Bcen_4576 NC_008061.1 1832886 1833398 R PFAM: CheW-like protein; KEGG: bur:Bcep18194_B2307 CheW protein; CheW protein complement(1832886..1833398) Burkholderia cenocepacia AU 1054 4094332 YP_624431.1 CDS Bcen_4577 NC_008061.1 1833395 1835071 R PFAM: histidine kinase, HAMP region; KEGG: bur:Bcep18194_B2308 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1833395..1835071) Burkholderia cenocepacia AU 1054 4094333 YP_624432.1 CDS Bcen_4578 NC_008061.1 1835196 1836329 R PFAM: response regulator receiver; KEGG: bur:Bcep18194_B2309 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase complement(1835196..1836329) Burkholderia cenocepacia AU 1054 4094334 YP_624433.1 CDS Bcen_4579 NC_008061.1 1836814 1838397 R TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bur:Bcep18194_B2310 Na+/H+ antiporter; Na+/H+ antiporter complement(1836814..1838397) Burkholderia cenocepacia AU 1054 4094335 YP_624434.1 CDS Bcen_4580 NC_008061.1 1838627 1840060 R PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B2311 aldehyde dehydrogenase; aldehyde dehydrogenase complement(1838627..1840060) Burkholderia cenocepacia AU 1054 4094336 YP_624435.1 CDS Bcen_4581 NC_008061.1 1840089 1841729 R catalyzes the condensation of two pyruvates to form acetolactate, implicated in pH homeostasis via the acetoin-2,3-butanediol pathway or in valine biosynthesis; acetolactate synthase complement(1840089..1841729) Burkholderia cenocepacia AU 1054 4094337 YP_624436.1 CDS Bcen_4582 NC_008061.1 1842108 1842446 D PFAM: protein of unknown function DUF891; KEGG: bur:Bcep18194_B2313 protein of unknown function DUF891; hypothetical protein 1842108..1842446 Burkholderia cenocepacia AU 1054 4094338 YP_624437.1 CDS Bcen_4583 NC_008061.1 1842450 1842749 D KEGG: bur:Bcep18194_B2314 transcriptional regulator; transcriptional regulator 1842450..1842749 Burkholderia cenocepacia AU 1054 4094339 YP_624438.1 CDS Bcen_4584 NC_008061.1 1842798 1844084 R PFAM: protein of unknown function DUF445; KEGG: bur:Bcep18194_B2315 protein of unknown function DUF445; hypothetical protein complement(1842798..1844084) Burkholderia cenocepacia AU 1054 4094340 YP_624439.1 CDS Bcen_4585 NC_008061.1 1844237 1845457 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2322 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1844237..1845457) Burkholderia cenocepacia AU 1054 4094341 YP_624440.1 CDS Bcen_4586 NC_008061.1 1845447 1845773 R PFAM: Rieske [2Fe-2S] region; KEGG: bur:Bcep18194_B2323 Rieske (2Fe-2S) protein; Rieske (2Fe-2S) protein complement(1845447..1845773) Burkholderia cenocepacia AU 1054 4094342 YP_624441.1 CDS Bcen_4587 NC_008061.1 1845809 1846285 R PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: bur:Bcep18194_B2324 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta complement(1845809..1846285) Burkholderia cenocepacia AU 1054 4094343 YP_624442.1 CDS Bcen_4588 NC_008061.1 1846300 1847607 R PFAM: ring hydroxylating dioxygenase, alpha subunit; KEGG: bur:Bcep18194_B2325 ring hydroxylating dioxygenase, alpha subunit/Rieske (2Fe-2S) protein; Rieske (2Fe-2S) protein complement(1846300..1847607) Burkholderia cenocepacia AU 1054 4094344 YP_624443.1 CDS Bcen_4589 NC_008061.1 1847784 1848743 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B2326 transcriptional regulator, AraC family; AraC family transcriptional regulator 1847784..1848743 Burkholderia cenocepacia AU 1054 4094345 YP_624444.1 CDS Bcen_4590 NC_008061.1 1848891 1849202 R hypothetical protein complement(1848891..1849202) Burkholderia cenocepacia AU 1054 4094346 YP_624445.1 CDS Bcen_4591 NC_008061.1 1849247 1850944 R PFAM: histidine kinase, HAMP region; KEGG: rso:RS02364 methyl-accepting chemotaxis transducer transmembrane protein; methyl-accepting chemotaxis sensory transducer complement(1849247..1850944) Burkholderia cenocepacia AU 1054 4094347 YP_624446.1 CDS Bcen_4592 NC_008061.1 1851113 1852003 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2327 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1851113..1852003) Burkholderia cenocepacia AU 1054 4094348 YP_624447.1 CDS Bcen_4593 NC_008061.1 1852095 1853228 D KEGG: bur:Bcep18194_B2328 muconate cycloisomerase TIGRFAM: Muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing enzyme-like; muconate and chloromuconate cycloisomerase 1852095..1853228 Burkholderia cenocepacia AU 1054 4094349 YP_624448.1 CDS Bcen_4594 NC_008061.1 1853261 1854163 D TIGRFAM: Catechol 1,2-dioxygenase, proteobacteria; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bur:Bcep18194_B2329 catechol dioxygenase; catechol 1,2-dioxygenase 1853261..1854163 Burkholderia cenocepacia AU 1054 4094311 YP_624449.1 CDS Bcen_4595 NC_008061.1 1854207 1854497 D PFAM: Muconolactone delta-isomerase; KEGG: bur:Bcep18194_B2330 muconolactone delta-isomerase; muconolactone delta-isomerase 1854207..1854497 Burkholderia cenocepacia AU 1054 4094312 YP_624450.1 CDS Bcen_4596 NC_008061.1 1854678 1855457 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bur:Bcep18194_B2332 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) complement(1854678..1855457) Burkholderia cenocepacia AU 1054 4094313 YP_624451.1 CDS Bcen_4597 NC_008061.1 1855544 1856437 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2333 transcriptional regulator, LysR family; LysR family transcriptional regulator 1855544..1856437 Burkholderia cenocepacia AU 1054 4094314 YP_624452.1 CDS Bcen_4598 NC_008061.1 1856616 1857020 D KEGG: bur:Bcep18194_B2334 hypothetical protein; hypothetical protein 1856616..1857020 Burkholderia cenocepacia AU 1054 4094315 YP_624453.1 CDS Bcen_4599 NC_008061.1 1857205 1859238 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B2335 NADH/flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(1857205..1859238) Burkholderia cenocepacia AU 1054 4094316 YP_624454.1 CDS Bcen_4600 NC_008061.1 1859314 1860381 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B2336 transcriptional regulator, AraC family; AraC family transcriptional regulator 1859314..1860381 Burkholderia cenocepacia AU 1054 4094317 YP_624455.1 CDS Bcen_4601 NC_008061.1 1860537 1861136 D hypothetical protein 1860537..1861136 Burkholderia cenocepacia AU 1054 4094318 YP_624456.1 CDS Bcen_4602 NC_008061.1 1861133 1861735 D hypothetical protein 1861133..1861735 Burkholderia cenocepacia AU 1054 4094319 YP_624457.1 CDS Bcen_4603 NC_008061.1 1861835 1862314 R PFAM: protein of unknown function DUF126; KEGG: bur:Bcep18194_B2339 protein of unknown function DUF126; hypothetical protein complement(1861835..1862314) Burkholderia cenocepacia AU 1054 4094320 YP_624458.1 CDS Bcen_4604 NC_008061.1 1862307 1863554 R PFAM: protein of unknown function DUF521; KEGG: bur:Bcep18194_B2340 protein of unknown function DUF521; hypothetical protein complement(1862307..1863554) Burkholderia cenocepacia AU 1054 4094321 YP_624459.1 CDS Bcen_4605 NC_008061.1 1863761 1864189 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B2341 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(1863761..1864189) Burkholderia cenocepacia AU 1054 4094322 YP_624460.1 CDS Bcen_4606 NC_008061.1 1864282 1865202 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2342 transcriptional regulator, LysR family; LysR family transcriptional regulator 1864282..1865202 Burkholderia cenocepacia AU 1054 4094323 YP_624461.1 CDS Bcen_4607 NC_008061.1 1865312 1865743 D PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B2343 hypothetical protein; regulatory protein MarR 1865312..1865743 Burkholderia cenocepacia AU 1054 4094324 YP_624462.1 CDS Bcen_4608 NC_008061.1 1865807 1866901 D PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_B2344 secretion protein, HlyD family; secretion protein HlyD 1865807..1866901 Burkholderia cenocepacia AU 1054 4094325 YP_624463.1 CDS Bcen_4609 NC_008061.1 1866915 1868489 D TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2345 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 1866915..1868489 Burkholderia cenocepacia AU 1054 4094326 YP_624464.1 CDS Bcen_4610 NC_008061.1 1868507 1869949 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2346 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT 1868507..1869949 Burkholderia cenocepacia AU 1054 4094327 YP_624465.1 CDS Bcen_4611 NC_008061.1 1870073 1871323 D PFAM: transposase, mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein; transposase, mutator type 1870073..1871323 Burkholderia cenocepacia AU 1054 4094328 YP_624466.1 CDS Bcen_4613 NC_008061.1 1872170 1872454 R KEGG: bur:Bcep18194_A5988 hypothetical protein; hypothetical protein complement(1872170..1872454) Burkholderia cenocepacia AU 1054 4094330 YP_624467.1 CDS Bcen_4614 NC_008061.1 1872451 1873293 R KEGG: bur:Bcep18194_C7604 hypothetical protein; hypothetical protein complement(1872451..1873293) Burkholderia cenocepacia AU 1054 4094292 YP_624468.1 CDS Bcen_4615 NC_008061.1 1873432 1876008 R KEGG: bur:Bcep18194_C7607 hypothetical protein; hypothetical protein complement(1873432..1876008) Burkholderia cenocepacia AU 1054 4094293 YP_624469.1 CDS Bcen_4616 NC_008061.1 1876039 1876842 R KEGG: bur:Bcep18194_C7608 hypothetical protein; hypothetical protein complement(1876039..1876842) Burkholderia cenocepacia AU 1054 4094294 YP_624470.1 CDS Bcen_4617 NC_008061.1 1876853 1879405 R PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_A3549 rhs element Vgr protein; Rhs element Vgr protein complement(1876853..1879405) Burkholderia cenocepacia AU 1054 4094295 YP_624471.1 CDS Bcen_4618 NC_008061.1 1879778 1879900 R KEGG: bur:Bcep18194_B2348 glutathione S-transferase-like; hypothetical protein complement(1879778..1879900) Burkholderia cenocepacia AU 1054 4094296 YP_624472.1 CDS Bcen_4619 NC_008061.1 1879945 1880406 R TIGRFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_B2349 hypothetical protein; hypothetical protein complement(1879945..1880406) Burkholderia cenocepacia AU 1054 4094297 YP_624473.1 CDS Bcen_4620 NC_008061.1 1880549 1881460 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2352 transcriptional regulator, LysR family; LysR family transcriptional regulator 1880549..1881460 Burkholderia cenocepacia AU 1054 4094298 YP_624474.1 CDS Bcen_4621 NC_008061.1 1881593 1882909 D PFAM: General substrate transporter; KEGG: bur:Bcep18194_B2353 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 1881593..1882909 Burkholderia cenocepacia AU 1054 4094299 YP_624475.1 CDS Bcen_4622 NC_008061.1 1882922 1884139 D PFAM: amidohydrolase; KEGG: bur:Bcep18194_B2354 amidohydrolase; amidohydrolase 1882922..1884139 Burkholderia cenocepacia AU 1054 4094300 YP_624476.1 CDS Bcen_4623 NC_008061.1 1884369 1884665 R hypothetical protein complement(1884369..1884665) Burkholderia cenocepacia AU 1054 4094301 YP_624477.1 CDS Bcen_4624 NC_008061.1 1885235 1888102 D KEGG: nmu:Nmul_A0544 hypothetical protein; hypothetical protein 1885235..1888102 Burkholderia cenocepacia AU 1054 4094302 YP_624478.1 CDS Bcen_4625 NC_008061.1 1888110 1888655 D KEGG: nmu:Nmul_A0544 hypothetical protein; hypothetical protein 1888110..1888655 Burkholderia cenocepacia AU 1054 4094303 YP_624479.1 CDS Bcen_4626 NC_008061.1 1888652 1889104 D SMART: Response regulator receiver; KEGG: ade:Adeh_0564 response regulator receiver domain protein (CheY-like); response regulator receiver protein 1888652..1889104 Burkholderia cenocepacia AU 1054 4094304 YP_624480.1 CDS Bcen_4627 NC_008061.1 1889106 1890353 D PFAM: purine and other phosphorylases, family 1; KEGG: nmu:Nmul_A0542 response regulator receiver domain protein (CheY-like); response regulator receiver protein 1889106..1890353 Burkholderia cenocepacia AU 1054 4094305 YP_624481.1 CDS Bcen_4628 NC_008061.1 1891058 1892920 R PFAM: histidine kinase, HAMP region; KEGG: bur:Bcep18194_B2357 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1891058..1892920) Burkholderia cenocepacia AU 1054 4094306 YP_624482.1 CDS Bcen_4629 NC_008061.1 1893093 1893764 R PFAM: OmpA/MotB; KEGG: bur:Bcep18194_B2358 outer membrane protein, OmpA/MotB family; OmpA/MotB protein complement(1893093..1893764) Burkholderia cenocepacia AU 1054 4094307 YP_624483.1 CDS Bcen_4630 NC_008061.1 1893838 1894602 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: bur:Bcep18194_B2359 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(1893838..1894602) Burkholderia cenocepacia AU 1054 4094308 YP_624484.1 CDS Bcen_4631 NC_008061.1 1894617 1895867 R PFAM: cyclic nucleotide-binding; KEGG: bur:Bcep18194_B2360 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein complement(1894617..1895867) Burkholderia cenocepacia AU 1054 4094309 YP_624485.1 CDS Bcen_4632 NC_008061.1 1896109 1896828 R PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_B2364 glutathione S-transferase-like; glutathione S-transferase complement(1896109..1896828) Burkholderia cenocepacia AU 1054 4094310 YP_624486.1 CDS Bcen_4633 NC_008061.1 1897059 1898414 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase-like; KEGG: bur:Bcep18194_B2365 polyhydroxyalkanoate depolymerase; polyhydroxyalkanoate depolymerase 1897059..1898414 Burkholderia cenocepacia AU 1054 4093866 YP_624487.1 CDS Bcen_4634 NC_008061.1 1898522 1898986 R KEGG: bur:Bcep18194_B2366 hypothetical protein; hypothetical protein complement(1898522..1898986) Burkholderia cenocepacia AU 1054 4093867 YP_624488.1 CDS Bcen_4635 NC_008061.1 1899481 1899915 R PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_B2367 hypothetical protein; cupin complement(1899481..1899915) Burkholderia cenocepacia AU 1054 4093868 YP_624489.1 CDS Bcen_4636 NC_008061.1 1899999 1900766 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B2375 ABC transporter, ATPase subunit; ABC transporter complement(1899999..1900766) Burkholderia cenocepacia AU 1054 4093869 YP_624490.1 CDS Bcen_4637 NC_008061.1 1900800 1901513 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2376 ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit; amino acid ABC transporter permease complement(1900800..1901513) Burkholderia cenocepacia AU 1054 4093870 YP_624491.1 CDS Bcen_4638 NC_008061.1 1901510 1902199 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2377 ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit; amino acid ABC transporter permease complement(1901510..1902199) Burkholderia cenocepacia AU 1054 4093871 YP_624492.1 CDS Bcen_4639 NC_008061.1 1902950 1903180 D KEGG: bur:Bcep18194_B2384 hypothetical protein; hypothetical protein 1902950..1903180 Burkholderia cenocepacia AU 1054 4093872 YP_624493.1 CDS Bcen_4640 NC_008061.1 1903317 1904444 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B2385 outer membrane protein (porin); porin 1903317..1904444 Burkholderia cenocepacia AU 1054 4093873 YP_624494.1 CDS Bcen_4641 NC_008061.1 1904626 1905321 D TIGRFAM: Histidine utilization repressor; PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B2386 transcriptional regulator, histidine utilization repressor, GntR family; histidine utilization repressor 1904626..1905321 Burkholderia cenocepacia AU 1054 4093874 YP_624495.1 CDS Bcen_4642 NC_008061.1 1905342 1906583 R PFAM: glycosyl transferase, family 28; KEGG: bur:Bcep18194_B2387 glycosyl transferase, family 28; glycosyl transferase family protein complement(1905342..1906583) Burkholderia cenocepacia AU 1054 4093875 YP_624496.1 CDS Bcen_4643 NC_008061.1 1906679 1907299 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B2388 transcriptional regulator, TetR family; TetR family transcriptional regulator 1906679..1907299 Burkholderia cenocepacia AU 1054 4093876 YP_624497.1 CDS Bcen_4644 NC_008061.1 1907486 1907839 D KEGG: bur:Bcep18194_B2392 hypothetical protein; hypothetical protein 1907486..1907839 Burkholderia cenocepacia AU 1054 4093877 YP_624498.1 CDS Bcen_4645 NC_008061.1 1907878 1908675 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2393 alpha/beta hydrolase; alpha/beta hydrolase complement(1907878..1908675) Burkholderia cenocepacia AU 1054 4093878 YP_624499.1 CDS Bcen_4646 NC_008061.1 1908786 1909766 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2394 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1908786..1909766) Burkholderia cenocepacia AU 1054 4093879 YP_624500.1 CDS Bcen_4647 NC_008061.1 1909966 1910244 R KEGG: bur:Bcep18194_B2395 hypothetical protein; hypothetical protein complement(1909966..1910244) Burkholderia cenocepacia AU 1054 4093880 YP_624501.1 CDS Bcen_4648 NC_008061.1 1910476 1912092 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B2396 amino acid transporter; amino acid permease-associated region complement(1910476..1912092) Burkholderia cenocepacia AU 1054 4093881 YP_624502.1 CDS Bcen_4649 NC_008061.1 1912597 1914129 D TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bur:Bcep18194_B2397 diguanylate cyclase (GGDEF domain); diguanylate cyclase 1912597..1914129 Burkholderia cenocepacia AU 1054 4093882 YP_624503.1 CDS Bcen_4650 NC_008061.1 1914278 1915348 D KEGG: bur:Bcep18194_B2398 membrane protein; membrane protein 1914278..1915348 Burkholderia cenocepacia AU 1054 4093883 YP_624504.1 CDS Bcen_4651 NC_008061.1 1915666 1917003 D catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 1915666..1917003 Burkholderia cenocepacia AU 1054 4093884 YP_624505.1 CDS Bcen_4652 NC_008061.1 1917037 1917717 D KEGG: bur:Bcep18194_B2400 hypothetical protein; hypothetical protein 1917037..1917717 Burkholderia cenocepacia AU 1054 4093885 YP_624506.1 CDS Bcen_4653 NC_008061.1 1917838 1919148 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr6569 MFS permease; major facilitator transporter complement(1917838..1919148) Burkholderia cenocepacia AU 1054 4093982 YP_624507.1 CDS Bcen_4654 NC_008061.1 1919324 1920406 R KEGG: rso:RSp0996 probable tartrate dehydrogenase oxidoreductase protein TIGRFAM: Tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase complement(1919324..1920406) Burkholderia cenocepacia AU 1054 4093983 YP_624508.1 CDS Bcen_4655 NC_008061.1 1920515 1921435 D PFAM: regulatory protein, LysR; KEGG: rso:RS02329 probable transcription regulator protein; LysR family transcriptional regulator 1920515..1921435 Burkholderia cenocepacia AU 1054 4093984 YP_624509.1 CDS Bcen_4656 NC_008061.1 1921667 1922671 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2402 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1921667..1922671) Burkholderia cenocepacia AU 1054 4093985 YP_624510.1 CDS Bcen_4657 NC_008061.1 1922778 1923197 R KEGG: bur:Bcep18194_B2403 hypothetical protein; hypothetical protein complement(1922778..1923197) Burkholderia cenocepacia AU 1054 4093986 YP_624511.1 CDS Bcen_4658 NC_008061.1 1923318 1924118 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B2404 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(1923318..1924118) Burkholderia cenocepacia AU 1054 4093987 YP_624512.1 CDS Bcen_4659 NC_008061.1 1924285 1924911 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B2405 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 1924285..1924911 Burkholderia cenocepacia AU 1054 4093988 YP_624513.1 CDS Bcen_4660 NC_008061.1 1924925 1925677 D PFAM: Methyltransferase type 11; KEGG: bur:Bcep18194_B2407 methylase involved in ubiquinone/menaquinone biosynthesis-like; methyltransferase type 12 1924925..1925677 Burkholderia cenocepacia AU 1054 4093989 YP_624514.1 CDS Bcen_4661 NC_008061.1 1925703 1926443 R KEGG: bur:Bcep18194_B2408 hypothetical protein; hypothetical protein complement(1925703..1926443) Burkholderia cenocepacia AU 1054 4093990 YP_624515.1 CDS Bcen_4662 NC_008061.1 1926457 1926897 R KEGG: bur:Bcep18194_B2409 hypothetical protein; hypothetical protein complement(1926457..1926897) Burkholderia cenocepacia AU 1054 4093991 YP_624516.1 CDS Bcen_4663 NC_008061.1 1926894 1928372 R PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: bur:Bcep18194_B2410 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase complement(1926894..1928372) Burkholderia cenocepacia AU 1054 4093992 YP_624517.1 CDS Bcen_4664 NC_008061.1 1928408 1928983 R PFAM: flavin reductase-like, FMN-binding; KEGG: bur:Bcep18194_B2411 flavin reductase-like, FMN-binding; flavin reductase-like, FMN-binding complement(1928408..1928983) Burkholderia cenocepacia AU 1054 4093993 YP_624518.1 CDS Bcen_4665 NC_008061.1 1929112 1930422 D TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase, class V; KEGG: bur:Bcep18194_B2412 cysteine desulfurase IscS; cysteine desulfurase IscS 1929112..1930422 Burkholderia cenocepacia AU 1054 4093994 YP_624519.1 CDS Bcen_4666 NC_008061.1 1930442 1930984 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B2413 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(1930442..1930984) Burkholderia cenocepacia AU 1054 4093995 YP_624520.1 CDS Bcen_4667 NC_008061.1 1931124 1931720 D KEGG: bur:Bcep18194_B2414 hypothetical protein; hypothetical protein 1931124..1931720 Burkholderia cenocepacia AU 1054 4093996 YP_624521.1 CDS Bcen_4668 NC_008061.1 1931733 1932272 R hypothetical protein complement(1931733..1932272) Burkholderia cenocepacia AU 1054 4093997 YP_624522.1 CDS Bcen_4669 NC_008061.1 1932356 1934170 R PFAM: sigma-54 factor, interaction region; SMART: ATPase; KEGG: bur:Bcep18194_B2415 sigma54-dependent transcriptional regulator RtcR; regulator of RNA terminal phosphate cyclase complement(1932356..1934170) Burkholderia cenocepacia AU 1054 4093998 YP_624523.1 CDS Bcen_4670 NC_008061.1 1934640 1935779 D PFAM: band 7 protein; KEGG: bur:Bcep18194_B2416 band 7 protein; hypothetical protein 1934640..1935779 Burkholderia cenocepacia AU 1054 4094098 YP_624524.1 CDS Bcen_4671 NC_008061.1 1935841 1937064 D PFAM: protein of unknown function UPF0027; KEGG: bur:Bcep18194_B2417 protein of unknown function UPF0027; hypothetical protein 1935841..1937064 Burkholderia cenocepacia AU 1054 4094099 YP_624525.1 CDS Bcen_4672 NC_008061.1 1937120 1937935 D KEGG: bur:Bcep18194_B2418 nucleotidyltransferase-like; nucleotidyltransferase-like protein 1937120..1937935 Burkholderia cenocepacia AU 1054 4094100 YP_624526.1 CDS Bcen_4673 NC_008061.1 1938075 1939346 D PFAM: protein of unknown function DUF1176; KEGG: bur:Bcep18194_B2419 hypothetical protein; hypothetical protein 1938075..1939346 Burkholderia cenocepacia AU 1054 4094101 YP_624527.1 CDS Bcen_4674 NC_008061.1 1939356 1940024 R PFAM: O-methyltransferase, family 3; KEGG: bur:Bcep18194_B2421 O-methyltransferase, family 3; O-methyltransferase family protein complement(1939356..1940024) Burkholderia cenocepacia AU 1054 4094102 YP_624528.1 CDS Bcen_4675 NC_008061.1 1940174 1941469 D KEGG: bur:Bcep18194_B2422 O-acetylhomoserine/O-acetylserine sulfhydrylase TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; O-acetylhomoserine/O-acetylserine sulfhydrylase 1940174..1941469 Burkholderia cenocepacia AU 1054 4094103 YP_624529.1 CDS Bcen_4676 NC_008061.1 1941635 1942360 D KEGG: bur:Bcep18194_B2423 hypothetical protein; hypothetical protein 1941635..1942360 Burkholderia cenocepacia AU 1054 4094104 YP_624530.1 CDS Bcen_4677 NC_008061.1 1942383 1942871 R KEGG: bur:Bcep18194_B2424 hypothetical protein; hypothetical protein complement(1942383..1942871) Burkholderia cenocepacia AU 1054 4094105 YP_624531.1 CDS Bcen_4678 NC_008061.1 1942933 1943208 R KEGG: bur:Bcep18194_B2425 hypothetical protein; hypothetical protein complement(1942933..1943208) Burkholderia cenocepacia AU 1054 4094106 YP_624532.1 CDS Bcen_4679 NC_008061.1 1943524 1944684 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B2426 outer membrane protein (porin); porin 1943524..1944684 Burkholderia cenocepacia AU 1054 4094107 YP_624533.1 CDS Bcen_4680 NC_008061.1 1944885 1945211 R KEGG: bur:Bcep18194_B2427 hypothetical protein; hypothetical protein complement(1944885..1945211) Burkholderia cenocepacia AU 1054 4094108 YP_624534.1 CDS Bcen_4681 NC_008061.1 1945418 1945705 D KEGG: bur:Bcep18194_B2428 hypothetical protein; hypothetical protein 1945418..1945705 Burkholderia cenocepacia AU 1054 4094109 YP_624535.1 CDS Bcen_4682 NC_008061.1 1945785 1947209 R TIGRFAM: Heavy metal sensor kinase; PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_B2429 heavy metal sensor signal transduction histidine kinase; heavy metal sensor signal transduction histidine kinase complement(1945785..1947209) Burkholderia cenocepacia AU 1054 4094110 YP_624536.1 CDS Bcen_4683 NC_008061.1 1947206 1947892 R TIGRFAM: Heavy metal response regulator; PFAM: response regulator receiver; KEGG: bur:Bcep18194_B2430 two component heavy metal response transcriptional regulator, winged helix family; two component heavy metal response transcriptional regulator complement(1947206..1947892) Burkholderia cenocepacia AU 1054 4094111 YP_624537.1 CDS Bcen_4684 NC_008061.1 1947889 1951101 R TIGRFAM: Heavy metal efflux pump CzcA; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_B2431 heavy metal efflux pump, CzcA family; heavy metal efflux pump CzcA complement(1947889..1951101) Burkholderia cenocepacia AU 1054 4094112 YP_624538.1 CDS Bcen_4685 NC_008061.1 1951230 1952699 R PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_B2432 secretion protein, HlyD family; secretion protein HlyD complement(1951230..1952699) Burkholderia cenocepacia AU 1054 4094113 YP_624539.1 CDS Bcen_4686 NC_008061.1 1952726 1954045 R PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2433 outer membrane efflux protein; outer membrane efflux protein complement(1952726..1954045) Burkholderia cenocepacia AU 1054 4094114 YP_624540.1 CDS Bcen_4687 NC_008061.1 1954289 1955479 R PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_B2434 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(1954289..1955479) Burkholderia cenocepacia AU 1054 4094115 YP_624541.1 CDS Bcen_4688 NC_008061.1 1955516 1956160 R PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: bur:Bcep18194_B2435 nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter complement(1955516..1956160) Burkholderia cenocepacia AU 1054 4094116 YP_624542.1 CDS Bcen_4689 NC_008061.1 1956220 1958451 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; KEGG: bur:Bcep18194_B2436 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(1956220..1958451) Burkholderia cenocepacia AU 1054 4094117 YP_624543.1 CDS Bcen_4690 NC_008061.1 1958751 1959029 R hypothetical protein complement(1958751..1959029) Burkholderia cenocepacia AU 1054 4094214 YP_624544.1 CDS Bcen_4691 NC_008061.1 1959100 1959354 R KEGG: bur:Bcep18194_B2437 hypothetical protein; hypothetical protein complement(1959100..1959354) Burkholderia cenocepacia AU 1054 4094215 YP_624545.1 CDS Bcen_4692 NC_008061.1 1959424 1961502 R PFAM: ferredoxin; KEGG: bur:Bcep18194_B2438 oxidoreductase FAD/NAD(P)-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(1959424..1961502) Burkholderia cenocepacia AU 1054 4094216 YP_624546.1 CDS Bcen_4693 NC_008061.1 1961538 1962182 R PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_B2439 glutathione S-transferase-like; glutathione S-transferase complement(1961538..1962182) Burkholderia cenocepacia AU 1054 4094217 YP_624547.1 CDS Bcen_4694 NC_008061.1 1962309 1963250 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2440 transcriptional regulator, LysR family; LysR family transcriptional regulator 1962309..1963250 Burkholderia cenocepacia AU 1054 4094218 YP_624548.1 CDS Bcen_4695 NC_008061.1 1963865 1964305 R hypothetical protein complement(1963865..1964305) Burkholderia cenocepacia AU 1054 4094219 YP_624549.1 CDS Bcen_4696 NC_008061.1 1965167 1965823 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B2442 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1965167..1965823) Burkholderia cenocepacia AU 1054 4094220 YP_624550.1 CDS Bcen_4697 NC_008061.1 1965911 1966813 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B2443 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1965911..1966813 Burkholderia cenocepacia AU 1054 4094221 YP_624551.1 CDS Bcen_4698 NC_008061.1 1966810 1968402 D PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B2444 K+ transport flavoprotein; FAD dependent oxidoreductase 1966810..1968402 Burkholderia cenocepacia AU 1054 4094222 YP_624552.1 CDS Bcen_4699 NC_008061.1 1968410 1969393 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B2445 alpha/beta hydrolase; alpha/beta hydrolase fold 1968410..1969393 Burkholderia cenocepacia AU 1054 4094223 YP_624553.1 CDS Bcen_4700 NC_008061.1 1969451 1969918 R PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B2446 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(1969451..1969918) Burkholderia cenocepacia AU 1054 4094224 YP_624554.1 CDS Bcen_4701 NC_008061.1 1969993 1970346 R hypothetical protein complement(1969993..1970346) Burkholderia cenocepacia AU 1054 4094225 YP_624555.1 CDS Bcen_4702 NC_008061.1 1971197 1972507 D PFAM: Collagen triple helix repeat; KEGG: bur:Bcep18194_B2447 lipoprotein; triple helix repeat-containing collagen 1971197..1972507 Burkholderia cenocepacia AU 1054 4094226 YP_624556.1 CDS Bcen_4703 NC_008061.1 1972542 1973918 D KEGG: bur:Bcep18194_B2448 hypothetical protein; hypothetical protein 1972542..1973918 Burkholderia cenocepacia AU 1054 4094227 YP_624557.1 CDS Bcen_4704 NC_008061.1 1973981 1975180 R TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2449 drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter complement(1973981..1975180) Burkholderia cenocepacia AU 1054 4094228 YP_624558.1 CDS Bcen_4705 NC_008061.1 1975843 1976574 D KEGG: bur:Bcep18194_B2450 hypothetical protein; hypothetical protein 1975843..1976574 Burkholderia cenocepacia AU 1054 4094229 YP_624559.1 CDS Bcen_4706 NC_008061.1 1976629 1977201 D PFAM: NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_B2452 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1976629..1977201 Burkholderia cenocepacia AU 1054 4094230 YP_624560.1 CDS Bcen_4707 NC_008061.1 1977235 1977831 R KEGG: bur:Bcep18194_B2455 hypothetical protein; hypothetical protein complement(1977235..1977831) Burkholderia cenocepacia AU 1054 4094231 YP_624561.1 CDS Bcen_4708 NC_008061.1 1977858 1978502 R PFAM: OmpA/MotB; KEGG: bur:Bcep18194_B2456 outer membrane protein, OmpA/MotB family; hypothetical protein complement(1977858..1978502) Burkholderia cenocepacia AU 1054 4094232 YP_624562.1 CDS Bcen_4709 NC_008061.1 1978506 1981313 R PFAM: protein of unknown function DUF802; KEGG: bur:Bcep18194_B2457 protein of unknown function DUF802; hypothetical protein complement(1978506..1981313) Burkholderia cenocepacia AU 1054 4094967 YP_624563.1 CDS Bcen_4710 NC_008061.1 1981324 1982115 R KEGG: bur:Bcep18194_B2458 hypothetical protein; hypothetical protein complement(1981324..1982115) Burkholderia cenocepacia AU 1054 4094968 YP_624564.1 CDS Bcen_4711 NC_008061.1 1982541 1983179 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B2460 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA complement(1982541..1983179) Burkholderia cenocepacia AU 1054 4094969 YP_624565.1 CDS Bcen_4712 NC_008061.1 1983294 1983794 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B2461 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1983294..1983794 Burkholderia cenocepacia AU 1054 4094970 YP_624566.1 CDS Bcen_4713 NC_008061.1 1983844 1984422 D KEGG: bur:Bcep18194_B2462 hypothetical protein; hypothetical protein 1983844..1984422 Burkholderia cenocepacia AU 1054 4094971 YP_624567.1 CDS Bcen_4714 NC_008061.1 1984658 1985920 D PFAM: transposase, IS111A/IS1328/IS1533; KEGG: bte:BTH_II1545 ISBma3, transposase; transposase IS116/IS110/IS902 1984658..1985920 Burkholderia cenocepacia AU 1054 4094972 YP_624568.1 CDS Bcen_4715 NC_008061.1 1986058 1987437 D Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 1986058..1987437 Burkholderia cenocepacia AU 1054 4094973 YP_624569.1 CDS Bcen_4716 NC_008061.1 1987517 1988419 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2464 transcriptional regulator, LysR family; LysR family transcriptional regulator 1987517..1988419 Burkholderia cenocepacia AU 1054 4094974 YP_624570.1 CDS Bcen_4717 NC_008061.1 1988543 1989532 D PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B2465 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase 1988543..1989532 Burkholderia cenocepacia AU 1054 4094975 YP_624571.1 CDS Bcen_4718 NC_008061.1 1989578 1990471 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B2466 NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase complement(1989578..1990471) Burkholderia cenocepacia AU 1054 4094976 YP_624572.1 CDS Bcen_4719 NC_008061.1 1990567 1991424 D SMART: Helix-turn-helix type 3; KEGG: bur:Bcep18194_B2467 transcriptional regulator, XRE family; XRE family transcriptional regulator 1990567..1991424 Burkholderia cenocepacia AU 1054 4094977 YP_624573.1 CDS Bcen_4720 NC_008061.1 1991593 1991976 R KEGG: bur:Bcep18194_B2470 hypothetical protein; hypothetical protein complement(1991593..1991976) Burkholderia cenocepacia AU 1054 4094978 YP_624574.1 CDS Bcen_4721 NC_008061.1 1992254 1992775 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B2471 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1992254..1992775 Burkholderia cenocepacia AU 1054 4094979 YP_624575.1 CDS Bcen_4722 NC_008061.1 1992936 1993883 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_C7238 transcriptional regulator, AraC family; AraC family transcriptional regulator 1992936..1993883 Burkholderia cenocepacia AU 1054 4094980 YP_624576.1 CDS Bcen_4723 NC_008061.1 1993994 1994467 R TIGRFAM: conserved hypothetical protein; PFAM: nuclear transport factor 2; KEGG: bur:Bcep18194_C7237 hypothetical protein; hypothetical protein complement(1993994..1994467) Burkholderia cenocepacia AU 1054 4094981 YP_624577.1 CDS Bcen_4724 NC_008061.1 1994535 1995389 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: ThiJ/PfpI; KEGG: bur:Bcep18194_C7236 ThiJ/PfpI family protein; twin-arginine translocation pathway signal complement(1994535..1995389) Burkholderia cenocepacia AU 1054 4094982 YP_624578.1 CDS Bcen_4725 NC_008061.1 1995542 1996288 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C7235 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1995542..1996288) Burkholderia cenocepacia AU 1054 4094983 YP_624579.1 CDS Bcen_4726 NC_008061.1 1996560 1997462 R PFAM: regulatory proteins, IclR; KEGG: pst:PSPTO2525 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(1996560..1997462) Burkholderia cenocepacia AU 1054 4094984 YP_624580.1 CDS Bcen_4728 NC_008061.1 1997757 1998839 D PFAM: ABC transporter related; SMART: ATPase; KEGG: pst:PSPTO2524 ABC transporter, ATP-binding protein; ABC transporter 1997757..1998839 Burkholderia cenocepacia AU 1054 4094986 YP_624581.1 CDS Bcen_4729 NC_008061.1 1998840 1999820 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO2523 ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 1998840..1999820 Burkholderia cenocepacia AU 1054 4094617 YP_624582.1 CDS Bcen_4730 NC_008061.1 1999817 2000611 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psp:PSPPH_2835 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 1999817..2000611 Burkholderia cenocepacia AU 1054 4094618 YP_624583.1 CDS Bcen_4731 NC_008061.1 2000608 2000958 D KEGG: mlo:mlr7027 hypothetical protein; hypothetical protein 2000608..2000958 Burkholderia cenocepacia AU 1054 4094619 YP_624584.1 CDS Bcen_4732 NC_008061.1 2000955 2002397 D PFAM: BFD-like [2Fe-2S]-binding region; KEGG: psb:Psyr_2331 FAD-dependent pyridine nucleotide-disulphide oxidoreductase:BFD-like [2Fe-2S]-binding region; BFD-like (2Fe-2S)-binding protein 2000955..2002397 Burkholderia cenocepacia AU 1054 4094620 YP_624585.1 CDS Bcen_4733 NC_008061.1 2002390 2003541 D PFAM: FAD dependent oxidoreductase; KEGG: pst:PSPTO2519 oxidoreductase, FAD-binding; FAD dependent oxidoreductase 2002390..2003541 Burkholderia cenocepacia AU 1054 4094621 YP_624586.1 CDS Bcen_4734 NC_008061.1 2003538 2004584 D PFAM: extracellular solute-binding protein, family 1; KEGG: psb:Psyr_2329 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2003538..2004584 Burkholderia cenocepacia AU 1054 4094622 YP_624587.1 CDS Bcen_4735 NC_008061.1 2004754 2006091 D PFAM: General substrate transporter; KEGG: bur:Bcep18194_B2487 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 2004754..2006091 Burkholderia cenocepacia AU 1054 4094623 YP_624588.1 CDS Bcen_4736 NC_008061.1 2006103 2007113 R converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase complement(2006103..2007113) Burkholderia cenocepacia AU 1054 4094624 YP_624589.1 CDS Bcen_4737 NC_008061.1 2007110 2008216 R PFAM: NAD/NADP octopine/nopaline dehydrogenase; KEGG: bur:Bcep18194_B2489 NAD-dependent glycerol-3-phosphate dehydrogenase-like; NAD/NADP octopine/nopaline dehydrogenase complement(2007110..2008216) Burkholderia cenocepacia AU 1054 4094625 YP_624590.1 CDS Bcen_4738 NC_008061.1 2008366 2009238 D KEGG: bur:Bcep18194_B2490 transcriptional regulator, AraC family; AraC family transcriptional regulator 2008366..2009238 Burkholderia cenocepacia AU 1054 4094626 YP_624591.1 CDS Bcen_4739 NC_008061.1 2009046 2010326 R PFAM: General substrate transporter; KEGG: bur:Bcep18194_B2742 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2009046..2010326) Burkholderia cenocepacia AU 1054 4094627 YP_624592.1 CDS Bcen_4740 NC_008061.1 2010964 2012442 D PFAM: aminotransferase, class V; KEGG: bur:Bcep18194_B2744 hypothetical protein; class V aminotransferase 2010964..2012442 Burkholderia cenocepacia AU 1054 4094628 YP_624593.1 CDS Bcen_4741 NC_008061.1 2012539 2013330 R SMART: Helix-turn-helix type 3; KEGG: bja:bll4873 hypothetical protein; XRE family transcriptional regulator complement(2012539..2013330) Burkholderia cenocepacia AU 1054 4094629 YP_624594.1 CDS Bcen_4742 NC_008061.1 2013440 2014519 D PFAM: Alcohol dehydrogenase GroES-like; KEGG: bja:blr4874 alcohol dehydrogenase; alcohol dehydrogenase GroES-like protein 2013440..2014519 Burkholderia cenocepacia AU 1054 4094630 YP_624595.1 CDS Bcen_4743 NC_008061.1 2014535 2015551 R PFAM: ThiJ/PfpI; KEGG: bur:Bcep18194_B2746 ThiJ/PfpI family protein; ThiJ/PfpI complement(2014535..2015551) Burkholderia cenocepacia AU 1054 4094631 YP_624596.1 CDS Bcen_4744 NC_008061.1 2015737 2016999 D PFAM: transposase, IS111A/IS1328/IS1533; KEGG: bte:BTH_II1545 ISBma3, transposase; transposase IS116/IS110/IS902 2015737..2016999 Burkholderia cenocepacia AU 1054 4094632 YP_624597.1 CDS Bcen_4745 NC_008061.1 2017176 2018186 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B2747 transcriptional regulator, AraC family; AraC family transcriptional regulator 2017176..2018186 Burkholderia cenocepacia AU 1054 4094633 YP_624598.1 CDS Bcen_4746 NC_008061.1 2018276 2018707 R KEGG: bur:Bcep18194_B2758 hypothetical protein; hypothetical protein complement(2018276..2018707) Burkholderia cenocepacia AU 1054 4094634 YP_624599.1 CDS Bcen_4747 NC_008061.1 2018751 2020598 R PFAM: peptidase S10, serine carboxypeptidase; KEGG: bur:Bcep18194_B2759 peptidase S10, serine carboxypeptidase; peptidase S10, serine carboxypeptidase complement(2018751..2020598) Burkholderia cenocepacia AU 1054 4094635 YP_624600.1 CDS Bcen_4748 NC_008061.1 2020837 2021118 D hypothetical protein 2020837..2021118 Burkholderia cenocepacia AU 1054 4095414 YP_624601.1 CDS Bcen_4749 NC_008061.1 2021297 2023111 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bur:Bcep18194_B2760 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(2021297..2023111) Burkholderia cenocepacia AU 1054 4095415 YP_624602.1 CDS Bcen_4750 NC_008061.1 2023281 2024222 R PFAM: copper resistance D; KEGG: bur:Bcep18194_B2761 copper resistance protein D; copper resistance D complement(2023281..2024222) Burkholderia cenocepacia AU 1054 4095416 YP_624603.1 CDS Bcen_4751 NC_008061.1 2024219 2024599 R PFAM: copper resistance protein CopC; KEGG: bur:Bcep18194_B2762 copper resistance protein CopC; copper resistance protein CopC complement(2024219..2024599) Burkholderia cenocepacia AU 1054 4095417 YP_624604.1 CDS Bcen_4752 NC_008061.1 2024616 2024960 R KEGG: bur:Bcep18194_B2763 hypothetical protein; hypothetical protein complement(2024616..2024960) Burkholderia cenocepacia AU 1054 4095418 YP_624605.1 CDS Bcen_4753 NC_008061.1 2025027 2026322 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: multicopper oxidase, type 2; KEGG: bur:Bcep18194_B2764 multicopper oxidase, type 3; twin-arginine translocation pathway signal complement(2025027..2026322) Burkholderia cenocepacia AU 1054 4095419 YP_624606.1 CDS Bcen_4754 NC_008061.1 2026324 2027826 R PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2765 outer membrane efflux protein; outer membrane efflux protein complement(2026324..2027826) Burkholderia cenocepacia AU 1054 4095420 YP_624607.1 CDS Bcen_4755 NC_008061.1 2027823 2028164 R KEGG: bur:Bcep18194_B2766 hypothetical protein; hypothetical protein complement(2027823..2028164) Burkholderia cenocepacia AU 1054 4095421 YP_624608.1 CDS Bcen_4756 NC_008061.1 2028181 2028606 R KEGG: bur:Bcep18194_B2767 hypothetical protein; hypothetical protein complement(2028181..2028606) Burkholderia cenocepacia AU 1054 4095422 YP_624609.1 CDS Bcen_4757 NC_008061.1 2028770 2029441 D TIGRFAM: Heavy metal response regulator; PFAM: response regulator receiver; KEGG: bur:Bcep18194_B2768 two component heavy metal response transcriptional regulator, winged helix family; two component heavy metal response transcriptional regulator 2028770..2029441 Burkholderia cenocepacia AU 1054 4095423 YP_624610.1 CDS Bcen_4758 NC_008061.1 2029438 2030847 D TIGRFAM: Heavy metal sensor kinase; PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_B2769 heavy metal sensor signal transduction histidine kinase; heavy metal sensor signal transduction histidine kinase 2029438..2030847 Burkholderia cenocepacia AU 1054 4095424 YP_624611.1 CDS Bcen_4759 NC_008061.1 2030871 2032079 R PFAM: major facilitator superfamily MFS_1; KEGG: neu:NE2492 general substrate transporters; major facilitator transporter complement(2030871..2032079) Burkholderia cenocepacia AU 1054 4095425 YP_624612.1 CDS Bcen_4760 NC_008061.1 2032171 2032356 R PFAM: protein of unknown function DUF1289; KEGG: eba:ebB119 hypothetical protein; hypothetical protein complement(2032171..2032356) Burkholderia cenocepacia AU 1054 4095426 YP_624613.1 CDS Bcen_4761 NC_008061.1 2032359 2033372 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sme:SMc04167 histidine-rich transporter transmembrane protein; cation diffusion facilitator family transporter complement(2032359..2033372) Burkholderia cenocepacia AU 1054 4095427 YP_624614.1 CDS Bcen_4762 NC_008061.1 2033385 2033660 R PFAM: protein of unknown function DUF156; KEGG: hypothetical protein; hypothetical protein complement(2033385..2033660) Burkholderia cenocepacia AU 1054 4095428 YP_624615.1 CDS Bcen_4763 NC_008061.1 2034015 2035025 D PFAM: sodium/calcium exchanger membrane region; KEGG: bur:Bcep18194_B2770 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane region 2034015..2035025 Burkholderia cenocepacia AU 1054 4095430 YP_624616.1 CDS Bcen_4764 NC_008061.1 2035120 2035488 R KEGG: bte:BTH_II1958 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(2035120..2035488) Burkholderia cenocepacia AU 1054 4095431 YP_624617.1 CDS Bcen_4765 NC_008061.1 2035485 2038691 R TIGRFAM: Heavy metal efflux pump CzcA; PFAM: acriflavin resistance protein; KEGG: bpm:BURPS1710b_0514 heavy metal efflux pump, CzcA family; heavy metal efflux pump CzcA complement(2035485..2038691) Burkholderia cenocepacia AU 1054 4095432 YP_624618.1 CDS Bcen_4766 NC_008061.1 2038688 2040211 R TIGRFAM: Secretion protein HlyD; KEGG: bpm:BURPS1710b_0513 efflux transporter, RND family, MFP subunit; secretion protein HlyD complement(2038688..2040211) Burkholderia cenocepacia AU 1054 4096024 YP_624619.1 CDS Bcen_4767 NC_008061.1 2040223 2041515 R PFAM: outer membrane efflux protein; KEGG: bpm:BURPS1710b_0512 outer membrane efflux protein; outer membrane efflux protein complement(2040223..2041515) Burkholderia cenocepacia AU 1054 4096025 YP_624620.1 CDS Bcen_4768 NC_008061.1 2041607 2041993 R KEGG: bpm:BURPS1710b_0511 hypothetical protein; hypothetical protein complement(2041607..2041993) Burkholderia cenocepacia AU 1054 4096026 YP_624621.1 CDS Bcen_4769 NC_008061.1 2042081 2042737 R PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_B2771 glutathione S-transferase-like; glutathione S-transferase complement(2042081..2042737) Burkholderia cenocepacia AU 1054 4096027 YP_624622.1 CDS Bcen_4770 NC_008061.1 2042850 2043230 D PFAM: helix-turn-helix, HxlR type; KEGG: bur:Bcep18194_B2772 transcriptional regulator; HxlR family transcriptional regulator 2042850..2043230 Burkholderia cenocepacia AU 1054 4096028 YP_624623.1 CDS Bcen_4771 NC_008061.1 2043248 2043622 D KEGG: bur:Bcep18194_B2773 hypothetical protein; hypothetical protein 2043248..2043622 Burkholderia cenocepacia AU 1054 4096029 YP_624624.1 CDS Bcen_4772 NC_008061.1 2043834 2045225 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2776 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 2043834..2045225 Burkholderia cenocepacia AU 1054 4096030 YP_624625.1 CDS Bcen_4773 NC_008061.1 2045697 2046509 D PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B2786 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2045697..2046509 Burkholderia cenocepacia AU 1054 4096031 YP_624626.1 CDS Bcen_4774 NC_008061.1 2046638 2047315 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B2804 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2046638..2047315 Burkholderia cenocepacia AU 1054 4096032 YP_624627.1 CDS Bcen_4775 NC_008061.1 2047335 2048096 R PFAM: Methyltransferase type 11; KEGG: bur:Bcep18194_B2805 trans-aconitate 2-methyltransferase; trans-aconitate 2-methyltransferase complement(2047335..2048096) Burkholderia cenocepacia AU 1054 4096033 YP_624628.1 CDS Bcen_4776 NC_008061.1 2048235 2049131 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2806 transcriptional regulator, LysR family; LysR family transcriptional regulator 2048235..2049131 Burkholderia cenocepacia AU 1054 4096034 YP_624629.1 CDS Bcen_4777 NC_008061.1 2049193 2049627 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B2809 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2049193..2049627) Burkholderia cenocepacia AU 1054 4096035 YP_624630.1 CDS Bcen_4778 NC_008061.1 2049777 2050247 R catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase complement(2049777..2050247) Burkholderia cenocepacia AU 1054 4096036 YP_624631.1 CDS Bcen_4779 NC_008061.1 2050278 2050937 R PFAM: carbonic anhydrase; KEGG: bur:Bcep18194_B2816 carbonate dehydratase; carbonate dehydratase complement(2050278..2050937) Burkholderia cenocepacia AU 1054 4096037 YP_624632.1 CDS Bcen_4780 NC_008061.1 2051031 2052083 R PFAM: transposase, IS891/IS1136/IS1341; KEGG: noc:Noc_1587 transposase; transposase, IS605 OrfB complement(2051031..2052083) Burkholderia cenocepacia AU 1054 4096038 YP_624633.1 CDS Bcen_4781 NC_008061.1 2052203 2053099 D controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR 2052203..2053099 Burkholderia cenocepacia AU 1054 4096039 YP_624634.1 CDS Bcen_4782 NC_008061.1 2053192 2053599 D KEGG: bur:Bcep18194_B2818 hypothetical protein; hypothetical protein 2053192..2053599 Burkholderia cenocepacia AU 1054 4096040 YP_624635.1 CDS Bcen_4783 NC_008061.1 2053660 2053863 R KEGG: bur:Bcep18194_B2819 hypothetical protein; hypothetical protein complement(2053660..2053863) Burkholderia cenocepacia AU 1054 4096041 YP_624636.1 CDS Bcen_4784 NC_008061.1 2053898 2055217 R KEGG: bur:Bcep18194_B2820 uncharacterized membrane-anchored protein; hypothetical protein complement(2053898..2055217) Burkholderia cenocepacia AU 1054 4096042 YP_624637.1 CDS Bcen_4785 NC_008061.1 2055380 2056255 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2821 transcriptional regulator, LysR family; LysR family transcriptional regulator 2055380..2056255 Burkholderia cenocepacia AU 1054 4096043 YP_624638.1 CDS Bcen_4786 NC_008061.1 2056283 2056849 R KEGG: bur:Bcep18194_B2822 hypothetical protein; hypothetical protein complement(2056283..2056849) Burkholderia cenocepacia AU 1054 4095752 YP_624639.1 CDS Bcen_4787 NC_008061.1 2056978 2057328 R KEGG: bur:Bcep18194_B2823 hypothetical protein; hypothetical protein complement(2056978..2057328) Burkholderia cenocepacia AU 1054 4095753 YP_624640.1 CDS Bcen_4788 NC_008061.1 2057653 2058465 D PFAM: penicillin-binding protein, transpeptidase; KEGG: bur:Bcep18194_B2849 beta-lactamase; Beta-lactamase 2057653..2058465 Burkholderia cenocepacia AU 1054 4095754 YP_624641.1 CDS Bcen_4789 NC_008061.1 2058462 2059601 D PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2850 acyltransferase 3; acyltransferase 3 2058462..2059601 Burkholderia cenocepacia AU 1054 4095755 YP_624642.1 CDS Bcen_4790 NC_008061.1 2059842 2060432 R PFAM: Methyltransferase type 11; SMART: Ribosomal RNA adenine methylase transferase; KEGG: bur:Bcep18194_B2854 phospholipid N-methyltransferase-like; methyltransferase type 12 complement(2059842..2060432) Burkholderia cenocepacia AU 1054 4095756 YP_624643.1 CDS Bcen_4791 NC_008061.1 2060606 2060860 D hypothetical protein 2060606..2060860 Burkholderia cenocepacia AU 1054 4095757 YP_624644.1 CDS Bcen_4792 NC_008061.1 2060901 2062622 R catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase complement(2060901..2062622) Burkholderia cenocepacia AU 1054 4095758 YP_624645.1 CDS Bcen_4793 NC_008061.1 2062916 2063416 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_B2859 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2062916..2063416) Burkholderia cenocepacia AU 1054 4095759 YP_624646.1 CDS Bcen_4794 NC_008061.1 2063612 2064628 D catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 2063612..2064628 Burkholderia cenocepacia AU 1054 4095760 YP_624647.1 CDS Bcen_4795 NC_008061.1 2064825 2065838 R KEGG: bur:Bcep18194_B2883 hypothetical protein; hypothetical protein complement(2064825..2065838) Burkholderia cenocepacia AU 1054 4095761 YP_624648.1 CDS Bcen_4796 NC_008061.1 2065969 2066796 R KEGG: bur:Bcep18194_B2884 hypothetical protein; hypothetical protein complement(2065969..2066796) Burkholderia cenocepacia AU 1054 4095762 YP_624649.1 CDS Bcen_4797 NC_008061.1 2066917 2067504 R PFAM: Sel1-like repeat; KEGG: bur:Bcep18194_B2885 hypothetical protein; Sel1 repeat-containing protein complement(2066917..2067504) Burkholderia cenocepacia AU 1054 4095763 YP_624650.1 CDS Bcen_4798 NC_008061.1 2067867 2068739 D PFAM: response regulator receiver; KEGG: bur:Bcep18194_B2886 response regulator receiver domain protein (CheY-like); response regulator receiver protein 2067867..2068739 Burkholderia cenocepacia AU 1054 4095764 YP_624651.1 CDS Bcen_4799 NC_008061.1 2068802 2069305 D PFAM: oxidoreductase, molybdopterin binding; KEGG: bur:Bcep18194_B2887 hypothetical protein; oxidoreductase, molybdopterin binding 2068802..2069305 Burkholderia cenocepacia AU 1054 4095765 YP_624652.1 CDS Bcen_4800 NC_008061.1 2069307 2071139 D PFAM: response regulator receiver; KEGG: bur:Bcep18194_B2888 periplasmic sensor hybrid histidine kinase; periplasmic sensor hybrid histidine kinase 2069307..2071139 Burkholderia cenocepacia AU 1054 4095766 YP_624653.1 CDS Bcen_4801 NC_008061.1 2071178 2071597 R PFAM: protein of unknown function UPF0047; KEGG: bur:Bcep18194_B2889 protein of unknown function UPF0047; hypothetical protein complement(2071178..2071597) Burkholderia cenocepacia AU 1054 4095767 YP_624654.1 CDS Bcen_4802 NC_008061.1 2071608 2071934 R KEGG: bur:Bcep18194_B2890 hypothetical protein; hypothetical protein complement(2071608..2071934) Burkholderia cenocepacia AU 1054 4095768 YP_624655.1 CDS Bcen_4803 NC_008061.1 2072112 2072846 D KEGG: bur:Bcep18194_B2891 hypothetical protein; hypothetical protein 2072112..2072846 Burkholderia cenocepacia AU 1054 4095769 YP_624656.1 CDS Bcen_4804 NC_008061.1 2072952 2074241 D KEGG: bur:Bcep18194_B2892 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 2072952..2074241 Burkholderia cenocepacia AU 1054 4095770 YP_624657.1 CDS Bcen_4805 NC_008061.1 2074262 2074627 D KEGG: bur:Bcep18194_B2893 hypothetical protein; hypothetical protein 2074262..2074627 Burkholderia cenocepacia AU 1054 4095652 YP_624658.1 CDS Bcen_4806 NC_008061.1 2074734 2075603 D KEGG: bur:Bcep18194_B2894 hypothetical protein; hypothetical protein 2074734..2075603 Burkholderia cenocepacia AU 1054 4095653 YP_624659.1 CDS Bcen_4807 NC_008061.1 2075746 2076378 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B2895 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 2075746..2076378 Burkholderia cenocepacia AU 1054 4095654 YP_624660.1 CDS Bcen_4808 NC_008061.1 2076433 2077113 R PFAM: protein of unknown function DUF1105; KEGG: bur:Bcep18194_B2897 protein of unknown function DUF1105; hypothetical protein complement(2076433..2077113) Burkholderia cenocepacia AU 1054 4095655 YP_624661.1 CDS Bcen_4809 NC_008061.1 2077262 2077831 R KEGG: bur:Bcep18194_B2898 hypothetical protein; hypothetical protein complement(2077262..2077831) Burkholderia cenocepacia AU 1054 4095656 YP_624662.1 CDS Bcen_4810 NC_008061.1 2078067 2078525 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_B2899 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2078067..2078525) Burkholderia cenocepacia AU 1054 4095657 YP_624663.1 CDS Bcen_4811 NC_008061.1 2078651 2079385 D PFAM: AzlC-like; KEGG: bur:Bcep18194_B2900 branched-chain amino acid efflux pump, AzlC family; AzlC-like protein 2078651..2079385 Burkholderia cenocepacia AU 1054 4095658 YP_624664.1 CDS Bcen_4812 NC_008061.1 2079378 2079686 D PFAM: branched-chain amino acid transport; KEGG: bur:Bcep18194_B2901 protein of unknown function DUF931; branched-chain amino acid transport 2079378..2079686 Burkholderia cenocepacia AU 1054 4095659 YP_624665.1 CDS Bcen_4813 NC_008061.1 2079878 2080657 D KEGG: bur:Bcep18194_B2902 acid phosphatase TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 2079878..2080657 Burkholderia cenocepacia AU 1054 4095660 YP_624666.1 CDS Bcen_4814 NC_008061.1 2080745 2081566 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B2903 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2080745..2081566) Burkholderia cenocepacia AU 1054 4095661 YP_624667.1 CDS Bcen_4815 NC_008061.1 2081751 2082173 R PFAM: PilT protein-like; KEGG: neu:NE1349 hypothetical protein; PilT protein-like protein complement(2081751..2082173) Burkholderia cenocepacia AU 1054 4095662 YP_624668.1 CDS Bcen_4816 NC_008061.1 2082170 2082388 R TIGRFAM: Transcriptional regulator AbrB; PFAM: SpoVT/AbrB-like; AbrB family transcriptional regulator complement(2082170..2082388) Burkholderia cenocepacia AU 1054 4095663 YP_624669.1 CDS Bcen_4817 NC_008061.1 2082751 2085411 R TIGRFAM: alpha-1,2-mannosidase, ; PFAM: glycosyl hydrolase 92; KEGG: bur:Bcep18194_B2906 alpha-1,2-mannosidase; alpha-1,2-mannosidase complement(2082751..2085411) Burkholderia cenocepacia AU 1054 4095664 YP_624670.1 CDS Bcen_4818 NC_008061.1 2085477 2087936 R TIGRFAM: alpha-1,2-mannosidase, ; PFAM: glycosyl hydrolase 92; KEGG: bur:Bcep18194_B2907 alpha-1,2-mannosidase; alpha-1,2-mannosidase complement(2085477..2087936) Burkholderia cenocepacia AU 1054 4095665 YP_624671.1 CDS Bcen_4819 NC_008061.1 2088268 2088648 R hypothetical protein complement(2088268..2088648) Burkholderia cenocepacia AU 1054 4095666 YP_624672.1 CDS Bcen_4820 NC_008061.1 2088903 2089370 R PFAM: Cupin; KEGG: bur:Bcep18194_B2908 hypothetical protein; cupin complement(2088903..2089370) Burkholderia cenocepacia AU 1054 4095667 YP_624673.1 CDS Bcen_4821 NC_008061.1 2089492 2090715 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(2089492..2090715) Burkholderia cenocepacia AU 1054 4095668 YP_624674.1 CDS Bcen_4822 NC_008061.1 2090787 2091776 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2910 transcriptional regulator, LysR family; LysR family transcriptional regulator 2090787..2091776 Burkholderia cenocepacia AU 1054 4095669 YP_624675.1 CDS Bcen_4823 NC_008061.1 2091780 2093132 R PFAM: Pyridoxal-dependent decarboxylase; KEGG: bur:Bcep18194_B2911 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase complement(2091780..2093132) Burkholderia cenocepacia AU 1054 4095670 YP_624676.1 CDS Bcen_4824 NC_008061.1 2093153 2093452 R SMART: regulatory protein, ArsR; KEGG: bur:Bcep18194_B2912 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(2093153..2093452) Burkholderia cenocepacia AU 1054 4095671 YP_624677.1 CDS Bcen_4825 NC_008061.1 2093632 2094513 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2913 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2093632..2094513) Burkholderia cenocepacia AU 1054 4095066 YP_624678.1 CDS Bcen_4826 NC_008061.1 2094641 2095678 D PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B2914 aldo/keto reductase; aldo/keto reductase 2094641..2095678 Burkholderia cenocepacia AU 1054 4095067 YP_624679.1 CDS Bcen_4827 NC_008061.1 2095697 2097361 R PFAM: ABC transporter, transmembrane region; SMART: ATPase; KEGG: bja:bll8295 probable ATP-binding protein; ABC transporter related complement(2095697..2097361) Burkholderia cenocepacia AU 1054 4095068 YP_624680.1 CDS Bcen_4828 NC_008061.1 2097603 2098166 D KEGG: bur:Bcep18194_B2917 GCN5-related N-acetyltransferase; hypothetical protein 2097603..2098166 Burkholderia cenocepacia AU 1054 4095069 YP_624681.1 CDS Bcen_4829 NC_008061.1 2098242 2098613 R SMART: Helix-turn-helix type 3; KEGG: bps:BPSL0141 phage DNA-binding protein; XRE family transcriptional regulator complement(2098242..2098613) Burkholderia cenocepacia AU 1054 4095070 YP_624682.1 CDS Bcen_4830 NC_008061.1 2098748 2099149 D hypothetical protein 2098748..2099149 Burkholderia cenocepacia AU 1054 4095071 YP_624683.1 CDS Bcen_4831 NC_008061.1 2099228 2099692 D hypothetical protein 2099228..2099692 Burkholderia cenocepacia AU 1054 4095072 YP_624684.1 CDS Bcen_4832 NC_008061.1 2099855 2100667 R PFAM: Methyltransferase type 11; KEGG: bur:Bcep18194_B2918 methylase involved in ubiquinone/menaquinone biosynthesis-like; methyltransferase type 11 complement(2099855..2100667) Burkholderia cenocepacia AU 1054 4095073 YP_624685.1 CDS Bcen_4833 NC_008061.1 2100702 2101121 R PFAM: PilT protein-like; KEGG: gox:GOX2554 plasmid stability-like protein; PilT protein-like protein complement(2100702..2101121) Burkholderia cenocepacia AU 1054 4095074 YP_624686.1 CDS Bcen_4834 NC_008061.1 2101121 2101372 R TIGRFAM: Prevent-host-death protein; KEGG: gox:GOX2553 hypothetical protein; prevent-host-death protein complement(2101121..2101372) Burkholderia cenocepacia AU 1054 4095075 YP_624687.1 CDS Bcen_4835 NC_008061.1 2101557 2102558 D KEGG: bur:Bcep18194_B2919 hypothetical protein; hypothetical protein 2101557..2102558 Burkholderia cenocepacia AU 1054 4095076 YP_624688.1 CDS Bcen_4836 NC_008061.1 2102780 2103370 D KEGG: bur:Bcep18194_B2920 hypothetical protein; hypothetical protein 2102780..2103370 Burkholderia cenocepacia AU 1054 4095077 YP_624689.1 CDS Bcen_4837 NC_008061.1 2103949 2104758 D PFAM: Redoxin; KEGG: bur:Bcep18194_B2921 thiol-disulfide isomerase/thioredoxin-like; redoxin 2103949..2104758 Burkholderia cenocepacia AU 1054 4095078 YP_624690.1 CDS Bcen_4838 NC_008061.1 2104758 2105069 D KEGG: bur:Bcep18194_B2923 (acyl-carrier protein) phosphodiesterase; hypothetical protein 2104758..2105069 Burkholderia cenocepacia AU 1054 4095079 YP_624691.1 CDS Bcen_4839 NC_008061.1 2105266 2106321 R KEGG: bbr:BB0493 plasmid-related protein; plasmid-like protein complement(2105266..2106321) Burkholderia cenocepacia AU 1054 4095080 YP_624692.1 CDS Bcen_4840 NC_008061.1 2106323 2106841 R KEGG: bbr:BB0494 hypothetical 20.3 kDa protein; hypothetical protein complement(2106323..2106841) Burkholderia cenocepacia AU 1054 4095081 YP_624693.1 CDS Bcen_4841 NC_008061.1 2106848 2107870 R KEGG: xfa:XFa0017 hypothetical protein; hypothetical protein complement(2106848..2107870) Burkholderia cenocepacia AU 1054 4095082 YP_624694.1 CDS Bcen_4842 NC_008061.1 2107936 2109783 R KEGG: bps:BPSS0382 hypothetical protein; hypothetical protein complement(2107936..2109783) Burkholderia cenocepacia AU 1054 4095083 YP_624695.1 CDS Bcen_4843 NC_008061.1 2109780 2111453 R PFAM: TRAG protein; KEGG: vfi:VFB44 protein VirD4; TRAG protein complement(2109780..2111453) Burkholderia cenocepacia AU 1054 4095084 YP_624696.1 CDS Bcen_4844 NC_008061.1 2111489 2111854 R hypothetical protein complement(2111489..2111854) Burkholderia cenocepacia AU 1054 4095163 YP_624697.1 CDS Bcen_4845 NC_008061.1 2111856 2112914 R PFAM: type II secretion system protein E; KEGG: vfi:VFB43 VirB11 ATPase; type II secretion system protein E complement(2111856..2112914) Burkholderia cenocepacia AU 1054 4095164 YP_624698.1 CDS Bcen_4846 NC_008061.1 2113004 2114227 R PFAM: conjugation TrbI-like protein; KEGG: sme:SMa1303 VirB10 transmembrane type IV secretion protein; conjugation TrbI-like protein complement(2113004..2114227) Burkholderia cenocepacia AU 1054 4095165 YP_624699.1 CDS Bcen_4847 NC_008061.1 2114220 2115044 R PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bmb:BruAb2_0061 type IV secretion system protein VirB9; conjugal transfer protein TrbG/VirB9/CagX complement(2114220..2115044) Burkholderia cenocepacia AU 1054 4095166 YP_624700.1 CDS Bcen_4848 NC_008061.1 2115041 2115745 R PFAM: VirB8; KEGG: bmb:BruAb2_0062 type IV secretion system protein VirB8; virulence protein complement(2115041..2115745) Burkholderia cenocepacia AU 1054 4095167 YP_624701.1 CDS Bcen_4850 NC_008061.1 2116651 2117802 R PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: xfa:XFa0011 conjugal transfer protein; TrbL/VirB6 plasmid conjugal transfer protein complement(2116651..2117802) Burkholderia cenocepacia AU 1054 4095169 YP_624702.1 CDS Bcen_4851 NC_008061.1 2117799 2120279 R TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE, TrbE, VirB component of type IV transporter system; KEGG: bms:BRA0066 type IV secretion system protein VirB4; type IV secretion/conjugal transfer ATPase complement(2117799..2120279) Burkholderia cenocepacia AU 1054 4095170 YP_624703.1 CDS Bcen_4852 NC_008061.1 2120281 2120619 R PFAM: type IV secretory pathway, VirB3-like; KEGG: bmb:BruAb2_0067 type IV secretion system protein VirB3; type IV secretory pathway, VirB3-like complement(2120281..2120619) Burkholderia cenocepacia AU 1054 4095171 YP_624704.1 CDS Bcen_4853 NC_008061.1 2120621 2120989 R KEGG: bmb:BruAb2_0068 type IV secretion system protein VirB2; hypothetical protein complement(2120621..2120989) Burkholderia cenocepacia AU 1054 4095172 YP_624705.1 CDS Bcen_4854 NC_008061.1 2120999 2121646 R PFAM: Lytic transglycosylase, catalytic; KEGG: bmb:BruAb2_0069 type IV secretion system protein VirB1; lytic transglycosylase, catalytic complement(2120999..2121646) Burkholderia cenocepacia AU 1054 4095173 YP_624706.1 CDS Bcen_4855 NC_008061.1 2122194 2122595 D PFAM: transposase IS3/IS911; KEGG: bte:BTH_I1931 transposase; transposase IS3/IS911 2122194..2122595 Burkholderia cenocepacia AU 1054 4095174 YP_624707.1 CDS Bcen_4856 NC_008061.1 2122592 2123323 D PFAM: Integrase, catalytic region; KEGG: bte:BTH_I1930 transposase; integrase catalytic subunit 2122592..2123323 Burkholderia cenocepacia AU 1054 4095175 YP_624708.1 CDS Bcen_4857 NC_008061.1 2123374 2124390 D PFAM: Integrase, catalytic region; KEGG: vvu:VV21151 transposase; integrase catalytic subunit 2123374..2124390 Burkholderia cenocepacia AU 1054 4095176 YP_624709.1 CDS Bcen_4858 NC_008061.1 2124812 2125660 R PFAM: Integrase, catalytic region; KEGG: rso:RSp0558 ISRSO16-transposase orfB protein; integrase catalytic subunit complement(2124812..2125660) Burkholderia cenocepacia AU 1054 4095177 YP_624710.1 CDS Bcen_4859 NC_008061.1 2125642 2125869 R PFAM: transposase IS3/IS911; KEGG: nmu:Nmul_A2011 transposase IS3/IS911; transposase IS3/IS911 complement(2125642..2125869) Burkholderia cenocepacia AU 1054 4095178 YP_624711.1 CDS Bcen_4860 NC_008061.1 2125879 2126226 D KEGG: rso:RSp0478 ISRSO7-transposase protein; hypothetical protein 2125879..2126226 Burkholderia cenocepacia AU 1054 4095179 YP_624712.1 CDS Bcen_4861 NC_008061.1 2126455 2126724 D KEGG: eba:p1B137 conserved hypothetical protein, with unknown function; hypothetical protein 2126455..2126724 Burkholderia cenocepacia AU 1054 4095180 YP_624713.1 CDS Bcen_4862 NC_008061.1 2126721 2127209 D PFAM: GCN5-related N-acetyltransferase; KEGG: eba:p1B136 histone acetyltransferase-related protein; N-acetyltransferase GCN5 2126721..2127209 Burkholderia cenocepacia AU 1054 4095181 YP_624714.1 CDS Bcen_4863 NC_008061.1 2127291 2127518 D KEGG: sdy:SDY_3395 hypothetical protein; hypothetical protein 2127291..2127518 Burkholderia cenocepacia AU 1054 4095182 YP_624715.1 CDS Bcen_4864 NC_008061.1 2127784 2128623 R PFAM: Integrase, catalytic region; KEGG: transposase B; integrase catalytic subunit complement(2127784..2128623) Burkholderia cenocepacia AU 1054 4095144 YP_624716.1 CDS Bcen_4865 NC_008061.1 2128620 2128883 R PFAM: transposase IS3/IS911; KEGG: nmu:NmulC_2784 transposase IS3/IS911; transposase IS3/IS911 complement(2128620..2128883) Burkholderia cenocepacia AU 1054 4095145 YP_624717.1 CDS Bcen_4866 NC_008061.1 2129185 2130690 D PFAM: Integrase, catalytic region; KEGG: psp:PSPPH_1140 ISPsy20, transposase IstA; integrase catalytic subunit 2129185..2130690 Burkholderia cenocepacia AU 1054 4095146 YP_624718.1 CDS Bcen_4867 NC_008061.1 2130683 2131480 D PFAM: IstB-like ATP-binding protein; SMART: ATPase; KEGG: psp:PSPPH_1141 ISPsy20, transposase IstB; IstB-like ATP-binding protein 2130683..2131480 Burkholderia cenocepacia AU 1054 4095147 YP_624719.1 CDS Bcen_4868 NC_008061.1 2131575 2132438 D hypothetical protein 2131575..2132438 Burkholderia cenocepacia AU 1054 4095148 YP_624720.1 CDS Bcen_4869 NC_008061.1 2132766 2133320 R hypothetical protein complement(2132766..2133320) Burkholderia cenocepacia AU 1054 4095149 YP_624721.1 CDS Bcen_4870 NC_008061.1 2133409 2134359 R PFAM: Integrase, catalytic region; KEGG: bpe:BP1810 transposase; integrase catalytic subunit complement(2133409..2134359) Burkholderia cenocepacia AU 1054 4095150 YP_624722.1 CDS Bcen_4871 NC_008061.1 2134502 2134945 D KEGG: xac:XAC3770 hypothetical protein; hypothetical protein 2134502..2134945 Burkholderia cenocepacia AU 1054 4095151 YP_624723.1 CDS Bcen_4872 NC_008061.1 2134997 2135641 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: rso:RSp1258 [acyl-carrier-protein] phosphodiesterase; ACP phosphodiesterase 2134997..2135641 Burkholderia cenocepacia AU 1054 4095152 YP_624724.1 CDS Bcen_4873 NC_008061.1 2135654 2135962 D KEGG: xac:XAC3774 hypothetical protein; hypothetical protein 2135654..2135962 Burkholderia cenocepacia AU 1054 4095153 YP_624725.1 CDS Bcen_4875 NC_008061.1 2136731 2137894 D PFAM: glycosyl hydrolase 53; KEGG: tma:TM1201 arabinogalactan endo-1,4-beta-galactosidase; arabinogalactan endo-1,4-beta-galactosidase 2136731..2137894 Burkholderia cenocepacia AU 1054 4095155 YP_624726.1 CDS Bcen_4876 NC_008061.1 2137938 2139233 R PFAM: major facilitator superfamily MFS_1; KEGG: dra:DR1322 conserved hypothetical protein; major facilitator transporter complement(2137938..2139233) Burkholderia cenocepacia AU 1054 4095156 YP_624727.1 CDS Bcen_4877 NC_008061.1 2139238 2141208 R PFAM: Glycoside hydrolase, family 42-like; KEGG: tma:TM1195 beta-galactosidase; beta-galactosidase complement(2139238..2141208) Burkholderia cenocepacia AU 1054 4095157 YP_624728.1 CDS Bcen_4878 NC_008061.1 2141245 2142096 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(2141245..2142096) Burkholderia cenocepacia AU 1054 4095158 YP_624729.1 CDS Bcen_4879 NC_008061.1 2142108 2143025 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein complement(2142108..2143025) Burkholderia cenocepacia AU 1054 4095159 YP_624730.1 CDS Bcen_4880 NC_008061.1 2143116 2144354 R PFAM: extracellular solute-binding protein, family 1; KEGG: ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(2143116..2144354) Burkholderia cenocepacia AU 1054 4095160 YP_624731.1 CDS Bcen_4881 NC_008061.1 2144418 2145572 R PFAM: ABC transporter related; SMART: ATPase; KEGG: malK; maltose/maltodextrin import ATP-binding protein MalK; ABC transporter complement(2144418..2145572) Burkholderia cenocepacia AU 1054 4095161 YP_624732.1 CDS Bcen_4882 NC_008061.1 2145808 2146821 D PFAM: regulatory protein, LacI; KEGG: mta:Moth_2273 transcriptional regulator, LacI family; LacI family transcriptional regulator 2145808..2146821 Burkholderia cenocepacia AU 1054 4095162 YP_624733.1 CDS Bcen_4883 NC_008061.1 2147162 2147383 R hypothetical protein complement(2147162..2147383) Burkholderia cenocepacia AU 1054 4095375 YP_624734.1 CDS Bcen_4884 NC_008061.1 2147380 2148141 R PFAM: IstB-like ATP-binding protein; SMART: ATPase; KEGG: eba:p1B4 IstB transposition helper protein; IstB-like ATP-binding protein complement(2147380..2148141) Burkholderia cenocepacia AU 1054 4095376 YP_624735.1 CDS Bcen_4886 NC_008061.1 2150754 2150918 R KEGG: atc:AGR_pAT_508 possible transposase of IS1353; hypothetical protein complement(2150754..2150918) Burkholderia cenocepacia AU 1054 4095378 YP_624736.1 CDS Bcen_4887 NC_008061.1 2151147 2152523 R PFAM: glycoside hydrolase, family 28; KEGG: eca:ECA1190 polygalacturonase; glycoside hydrolase family protein complement(2151147..2152523) Burkholderia cenocepacia AU 1054 4095379 YP_624737.1 CDS Bcen_4888 NC_008061.1 2153152 2153433 R hypothetical protein complement(2153152..2153433) Burkholderia cenocepacia AU 1054 4095380 YP_624738.1 CDS Bcen_4889 NC_008061.1 2153495 2154502 D PFAM: helix-turn-helix, AraC type; KEGG: pst:PSPTO4528 transcriptional regulator, AraC family; AraC family transcriptional regulator 2153495..2154502 Burkholderia cenocepacia AU 1054 4095381 YP_624739.1 CDS Bcen_4890 NC_008061.1 2154581 2155519 D KEGG: pst:PSPTO4527 hypothetical protein; hypothetical protein 2154581..2155519 Burkholderia cenocepacia AU 1054 4095382 YP_624740.1 CDS Bcen_4891 NC_008061.1 2155542 2156771 D PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP3203 major facilitator family transporter; major facilitator transporter 2155542..2156771 Burkholderia cenocepacia AU 1054 4095383 YP_624741.1 CDS Bcen_4892 NC_008061.1 2156808 2158250 D PFAM: Amidase; KEGG: pst:PSPTO4526 6-aminohexanoate-cyclic-dimer hydrolase; amidase 2156808..2158250 Burkholderia cenocepacia AU 1054 4095384 YP_624742.1 CDS Bcen_4893 NC_008061.1 2158754 2159626 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_C6233 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase complement(2158754..2159626) Burkholderia cenocepacia AU 1054 4095385 YP_624743.1 CDS Bcen_4894 NC_008061.1 2159771 2160541 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pst:PSPTO4263 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR complement(2159771..2160541) Burkholderia cenocepacia AU 1054 4095386 YP_624744.1 CDS Bcen_4895 NC_008061.1 2160694 2161248 R PFAM: OsmC-like protein; KEGG: pst:PSPTO4264 hypothetical protein; OsmC-like protein complement(2160694..2161248) Burkholderia cenocepacia AU 1054 4095387 YP_624745.1 CDS Bcen_4896 NC_008061.1 2161607 2162170 D PFAM: regulatory protein, TetR; KEGG: pst:PSPTO4267 transcriptional regulator, TetR family; TetR family transcriptional regulator 2161607..2162170 Burkholderia cenocepacia AU 1054 4095388 YP_624746.1 CDS Bcen_4897 NC_008061.1 2162297 2162638 D TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: pst:PSPTO4255 carboxymuconolactone decarboxylase family protein; alkylhydroperoxidase AhpD core 2162297..2162638 Burkholderia cenocepacia AU 1054 4095389 YP_624747.1 CDS Bcen_4898 NC_008061.1 2162708 2163388 D PFAM: DSBA oxidoreductase; KEGG: pst:PSPTO4261 isomerase; DSBA oxidoreductase 2162708..2163388 Burkholderia cenocepacia AU 1054 4095390 YP_624748.1 CDS Bcen_4899 NC_008061.1 2163537 2164646 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pst:PSPTO4256 NADH:flavin oxidoreductase/NADH oxidase family protein; NADH:flavin oxidoreductase 2163537..2164646 Burkholderia cenocepacia AU 1054 4095391 YP_624749.1 CDS Bcen_4900 NC_008061.1 2165027 2166235 D PFAM: aminotransferase, class I and II; KEGG: sha:SH0221 hypothetical protein; class I and II aminotransferase 2165027..2166235 Burkholderia cenocepacia AU 1054 4095392 YP_624750.1 CDS Bcen_4901 NC_008061.1 2166294 2166512 D PFAM: 4-oxalocrotonate tautomerase; KEGG: pst:PSPTO4257 4-oxalocrotonate tautomerase family protein; 4-oxalocrotonate tautomerase 2166294..2166512 Burkholderia cenocepacia AU 1054 4095393 YP_624751.1 CDS Bcen_4902 NC_008061.1 2166599 2166940 R hypothetical protein complement(2166599..2166940) Burkholderia cenocepacia AU 1054 4095394 YP_624752.1 CDS Bcen_4903 NC_008061.1 2166949 2167461 R KEGG: reu:Reut_C6261 hypothetical protein; hypothetical protein complement(2166949..2167461) Burkholderia cenocepacia AU 1054 4096102 YP_624753.1 CDS Bcen_4904 NC_008061.1 2167454 2168323 R PFAM: TniB; KEGG: reu:Reut_C6260 TniB; TniB protein complement(2167454..2168323) Burkholderia cenocepacia AU 1054 4096103 YP_624754.1 CDS Bcen_4905 NC_008061.1 2168333 2170132 R PFAM: Integrase, catalytic region; KEGG: reu:Reut_C6241 integrase, catalytic region; integrase catalytic subunit complement(2168333..2170132) Burkholderia cenocepacia AU 1054 4096104 YP_624755.1 CDS Bcen_4906 NC_008061.1 2170386 2170967 R PFAM: flavin reductase-like, FMN-binding; KEGG: psb:Psyr_0995 flavin reductase-like; flavin reductase-like, FMN-binding complement(2170386..2170967) Burkholderia cenocepacia AU 1054 4096105 YP_624756.1 CDS Bcen_4907 NC_008061.1 2171058 2172965 R PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll7928 fatty-acid--CoA ligase; AMP-dependent synthetase and ligase complement(2171058..2172965) Burkholderia cenocepacia AU 1054 4096106 YP_624757.1 CDS Bcen_4908 NC_008061.1 2172962 2173750 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB0364 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(2172962..2173750) Burkholderia cenocepacia AU 1054 4096107 YP_624758.1 CDS Bcen_4909 NC_008061.1 2173755 2174909 R PFAM: luciferase-like; KEGG: bbr:BB0646 luciferase-like monooxygenase; luciferase-like protein complement(2173755..2174909) Burkholderia cenocepacia AU 1054 4096108 YP_624759.1 CDS Bcen_4910 NC_008061.1 2175200 2175979 R PFAM: Creatininase; KEGG: hma:pNG7096 creatinine amidohydrolase; creatininase complement(2175200..2175979) Burkholderia cenocepacia AU 1054 4096109 YP_624760.1 CDS Bcen_4911 NC_008061.1 2175982 2176746 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gme:Gmet_1716 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(2175982..2176746) Burkholderia cenocepacia AU 1054 4096110 YP_624761.1 CDS Bcen_4912 NC_008061.1 2176965 2177786 D PFAM: helix-turn-helix, AraC type; KEGG: eba:ebA3750 transcriptional regulator; AraC family transcriptional regulator 2176965..2177786 Burkholderia cenocepacia AU 1054 4096111 YP_624762.1 CDS Bcen_4913 NC_008061.1 2177824 2179461 R PFAM: AMP-dependent synthetase and ligase; KEGG: mag:amb2631 acyl-CoA synthetase/AMP-acid ligase II; AMP-dependent synthetase and ligase complement(2177824..2179461) Burkholderia cenocepacia AU 1054 4096112 YP_624763.1 CDS Bcen_4914 NC_008061.1 2179663 2180811 R PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: rru:Rru_A1823 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(2179663..2180811) Burkholderia cenocepacia AU 1054 4096113 YP_624764.1 CDS Bcen_4915 NC_008061.1 2180834 2181436 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bte:BTH_II0671 Bkd operon transcriptional regulator; AsnC family transcriptional regulator complement(2180834..2181436) Burkholderia cenocepacia AU 1054 4096114 YP_624765.1 CDS Bcen_4916 NC_008061.1 2181592 2183379 R TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment; KEGG: bur:Bcep18194_A5441 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(2181592..2183379) Burkholderia cenocepacia AU 1054 4096115 YP_624766.1 CDS Bcen_4917 NC_008061.1 2183654 2185015 R TIGRFAM: Dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment; KEGG: bur:Bcep18194_A5442 dihydrolipoamide acetyltransferase; dihydrolipoamide acetyltransferase complement(2183654..2185015) Burkholderia cenocepacia AU 1054 4096116 YP_624767.1 CDS Bcen_4918 NC_008061.1 2185151 2187865 R paralogs to the E1 component of pyruvate dehydrogenase subunit E1; 2-oxoacid dehydrogenase subunit E1 complement(2185151..2187865) Burkholderia cenocepacia AU 1054 4096117 YP_624768.1 CDS Bcen_4919 NC_008061.1 2188081 2189058 R PFAM: helix-turn-helix, AraC type; KEGG: rru:Rru_A1951 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2188081..2189058) Burkholderia cenocepacia AU 1054 4096118 YP_624769.1 CDS Bcen_4920 NC_008061.1 2189154 2189438 D hypothetical protein 2189154..2189438 Burkholderia cenocepacia AU 1054 4096119 YP_624770.1 CDS Bcen_4921 NC_008061.1 2189762 2191111 D PFAM: General substrate transporter; KEGG: rso:RSc1093 4-hydroxybenzoate transporter transmembrane protein; major facilitator transporter 2189762..2191111 Burkholderia cenocepacia AU 1054 4096120 YP_624771.1 CDS Bcen_4922 NC_008061.1 2191186 2192358 D PFAM: porin, Gram-negative type; KEGG: bte:BTH_I1107 outer membrane porin OpcP; porin 2191186..2192358 Burkholderia cenocepacia AU 1054 4094734 YP_624772.1 CDS Bcen_4923 NC_008061.1 2192434 2192724 R hypothetical protein complement(2192434..2192724) Burkholderia cenocepacia AU 1054 4094735 YP_624773.1 CDS Bcen_4924 NC_008061.1 2193089 2193343 D hypothetical protein 2193089..2193343 Burkholderia cenocepacia AU 1054 4094736 YP_624774.1 CDS Bcen_4925 NC_008061.1 2193520 2193747 D KEGG: bur:Bcep18194_B0794 hypothetical protein; hypothetical protein 2193520..2193747 Burkholderia cenocepacia AU 1054 4094737 YP_624775.1 CDS Bcen_4926 NC_008061.1 2193744 2194319 D PFAM: protein of unknown function DUF1130; KEGG: bur:Bcep18194_B0793 protein of unknown function DUF1130; hypothetical protein 2193744..2194319 Burkholderia cenocepacia AU 1054 4094738 YP_624776.1 CDS Bcen_4927 NC_008061.1 2194595 2195332 D PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_B0791 protein of unknown function DUF81; hypothetical protein 2194595..2195332 Burkholderia cenocepacia AU 1054 4094739 YP_624777.1 CDS Bcen_4928 NC_008061.1 2195539 2195664 R KEGG: bur:Bcep18194_B0785 membrane protein, NnrU-like; hypothetical protein complement(2195539..2195664) Burkholderia cenocepacia AU 1054 4094740 YP_624778.1 CDS Bcen_4929 NC_008061.1 2195703 2196011 D PFAM: transposase IS3/IS911; KEGG: rso:RSc2314 probable transposase protein; transposase IS3/IS911 2195703..2196011 Burkholderia cenocepacia AU 1054 4094741 YP_624779.1 CDS Bcen_4931 NC_008061.1 2197260 2198333 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_C7659 outer membrane protein (porin); porin complement(2197260..2198333) Burkholderia cenocepacia AU 1054 4094743 YP_624780.1 CDS Bcen_4932 NC_008061.1 2198524 2199966 R PFAM: General substrate transporter; KEGG: mta:Moth_0632 general substrate transporter; major facilitator transporter complement(2198524..2199966) Burkholderia cenocepacia AU 1054 4094744 YP_624781.1 CDS Bcen_4933 NC_008061.1 2200203 2201126 R PFAM: dihydrodipicolinate synthetase; KEGG: cne:CNJ02600 dihydrodipicolinate synthase DapA; dihydrodipicolinate synthetase complement(2200203..2201126) Burkholderia cenocepacia AU 1054 4094745 YP_624782.1 CDS Bcen_4934 NC_008061.1 2201308 2202252 D PFAM: regulatory protein, LysR; KEGG: reu:Reut_A1909 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 2201308..2202252 Burkholderia cenocepacia AU 1054 4094746 YP_624783.1 CDS Bcen_4935 NC_008061.1 2202390 2202647 D KEGG: bur:Bcep18194_B1657 hypothetical protein; hypothetical protein 2202390..2202647 Burkholderia cenocepacia AU 1054 4094747 YP_624784.1 CDS Bcen_4936 NC_008061.1 2203015 2203722 R PFAM: Pirin-like; KEGG: pae:PA1210 conserved hypothetical protein; Pirin-like protein complement(2203015..2203722) Burkholderia cenocepacia AU 1054 4094748 YP_624785.1 CDS Bcen_4937 NC_008061.1 2203806 2204570 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_B3691 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2203806..2204570) Burkholderia cenocepacia AU 1054 4094749 YP_624786.1 CDS Bcen_4938 NC_008061.1 2204708 2205625 D PFAM: regulatory protein, LysR; KEGG: reu:Reut_B3692 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 2204708..2205625 Burkholderia cenocepacia AU 1054 4094750 YP_624787.1 CDS Bcen_4939 NC_008061.1 2205788 2206753 D PFAM: Alpha/beta hydrolase fold-3; KEGG: bur:Bcep18194_C7669 esterase/lipase/thioesterase; Alpha/beta hydrolase fold-3 2205788..2206753 Burkholderia cenocepacia AU 1054 4094751 YP_624788.1 CDS Bcen_4940 NC_008061.1 2206787 2207191 D PFAM: protein of unknown function DUF1486; hypothetical protein 2206787..2207191 Burkholderia cenocepacia AU 1054 4094752 YP_624789.1 CDS Bcen_4941 NC_008061.1 2207475 2208569 R PFAM: helix-turn-helix, AraC type; KEGG: pst:PSPTO4068 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2207475..2208569) Burkholderia cenocepacia AU 1054 4094753 YP_624790.1 CDS Bcen_4942 NC_008061.1 2208908 2209714 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pst:PSPTO4067 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 2208908..2209714 Burkholderia cenocepacia AU 1054 4093905 YP_624791.1 CDS Bcen_4943 NC_008061.1 2209794 2210090 D KEGG: pst:PSPTO4066 hypothetical protein; hypothetical protein 2209794..2210090 Burkholderia cenocepacia AU 1054 4093906 YP_624792.1 CDS Bcen_4944 NC_008061.1 2210115 2210822 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpm:BURPS1710b_0587 oxidoreductase homolog; short-chain dehydrogenase/reductase SDR 2210115..2210822 Burkholderia cenocepacia AU 1054 4093907 YP_624793.1 CDS Bcen_4945 NC_008061.1 2210966 2212288 R PFAM: General substrate transporter; KEGG: bps:BPSS1475 transmembrane sugar transporter; major facilitator transporter complement(2210966..2212288) Burkholderia cenocepacia AU 1054 4093908 YP_624794.1 CDS Bcen_4946 NC_008061.1 2212371 2213516 R PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: bja:blr6699 hypothetical protein; mandelate racemase/muconate lactonizing-like protein complement(2212371..2213516) Burkholderia cenocepacia AU 1054 4093909 YP_624795.1 CDS Bcen_4947 NC_008061.1 2214061 2215023 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: bba:Bd3195 hxdroxypyruvate reductase; D-isomer specific 2-hydroxyacid dehydrogenase complement(2214061..2215023) Burkholderia cenocepacia AU 1054 4093910 YP_624796.1 CDS Bcen_4948 NC_008061.1 2215337 2216095 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B1229 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2215337..2216095 Burkholderia cenocepacia AU 1054 4093911 YP_624797.1 CDS Bcen_4949 NC_008061.1 2216190 2217476 D PFAM: General substrate transporter; KEGG: pfo:Pfl_2236 general substrate transporter; major facilitator transporter 2216190..2217476 Burkholderia cenocepacia AU 1054 4093912 YP_624798.1 CDS Bcen_4950 NC_008061.1 2217524 2217916 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr5325 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2217524..2217916 Burkholderia cenocepacia AU 1054 4093913 YP_624799.1 CDS Bcen_4951 NC_008061.1 2217977 2219224 D PFAM: Citrate synthase; KEGG: reu:Reut_A1760 citrate synthase; citrate synthase 2217977..2219224 Burkholderia cenocepacia AU 1054 4093914 YP_624800.1 CDS Bcen_4952 NC_008061.1 2219566 2220477 R PFAM: regulatory protein, LysR; KEGG: dar:Daro_3580 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator complement(2219566..2220477) Burkholderia cenocepacia AU 1054 4093915 YP_624801.1 CDS Bcen_4953 NC_008061.1 2220577 2221494 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: sco:SCO1359 integral membrane protein; hypothetical protein 2220577..2221494 Burkholderia cenocepacia AU 1054 4093916 YP_624802.1 CDS Bcen_4954 NC_008061.1 2221676 2222212 D PFAM: NmrA-like; KEGG: syd:Syncc9605_0821 hypothetical protein; NmrA-like 2221676..2222212 Burkholderia cenocepacia AU 1054 4093917 YP_624803.1 CDS Bcen_4955 NC_008061.1 2222262 2223059 R PFAM: IstB-like ATP-binding protein; SMART: ATPase; KEGG: psp:PSPPH_1141 ISPsy20, transposase IstB; IstB-like ATP-binding protein complement(2222262..2223059) Burkholderia cenocepacia AU 1054 4093918 YP_624804.1 CDS Bcen_4956 NC_008061.1 2223052 2224557 R PFAM: Integrase, catalytic region; KEGG: psp:PSPPH_1140 ISPsy20, transposase IstA; integrase catalytic subunit complement(2223052..2224557) Burkholderia cenocepacia AU 1054 4093919 YP_624805.1 CDS Bcen_4957 NC_008061.1 2224842 2225510 R PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: possible membrane efflux protein; multiple antibiotic resistance (MarC)-like proteins complement(2224842..2225510) Burkholderia cenocepacia AU 1054 4093920 YP_624806.1 CDS Bcen_4958 NC_008061.1 2225507 2226526 R KEGG: twh:TWT151 hypothetical protein; hypothetical protein complement(2225507..2226526) Burkholderia cenocepacia AU 1054 4093921 YP_624807.1 CDS Bcen_4959 NC_008061.1 2226617 2227327 R PFAM: porin, opacity type; KEGG: sec:SC0307 SapA-like protein; porin, opacity type complement(2226617..2227327) Burkholderia cenocepacia AU 1054 4093922 YP_624808.1 CDS Bcen_4960 NC_008061.1 2227441 2228220 R PFAM: carbonic anhydrase; KEGG: reu:Reut_A0030 carbonate dehydratase; carbonate dehydratase complement(2227441..2228220) Burkholderia cenocepacia AU 1054 4093923 YP_624809.1 CDS Bcen_4961 NC_008061.1 2228499 2229143 R PFAM: regulatory protein, LuxR; KEGG: plu:plu0103 hypothetical protein; two component LuxR family transcriptional regulator complement(2228499..2229143) Burkholderia cenocepacia AU 1054 4094020 YP_624810.1 CDS Bcen_4962 NC_008061.1 2229140 2230585 R PFAM: ATP-binding region, ATPase-like; KEGG: cvi:CV3089 probable two-component system; histidine kinase complement(2229140..2230585) Burkholderia cenocepacia AU 1054 4094021 YP_624811.1 CDS Bcen_4963 NC_008061.1 2230916 2231656 R PFAM: NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_C6565 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(2230916..2231656) Burkholderia cenocepacia AU 1054 4094022 YP_624812.1 CDS Bcen_4964 NC_008061.1 2231704 2232774 R PFAM: Bile acid:sodium symporter; KEGG: bur:Bcep18194_C6563 arsenate-sodium symporter; bile acid:sodium symporter complement(2231704..2232774) Burkholderia cenocepacia AU 1054 4094023 YP_624813.1 CDS Bcen_4965 NC_008061.1 2232840 2233358 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bur:Bcep18194_C6562 protein tyrosine phosphatase; protein tyrosine phosphatase complement(2232840..2233358) Burkholderia cenocepacia AU 1054 4094024 YP_624814.1 CDS Bcen_4966 NC_008061.1 2233355 2233690 R PFAM: regulatory protein, ArsR; KEGG: bur:Bcep18194_C6561 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(2233355..2233690) Burkholderia cenocepacia AU 1054 4094025 YP_624815.1 CDS Bcen_4967 NC_008061.1 2233890 2235473 R TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2927 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(2233890..2235473) Burkholderia cenocepacia AU 1054 4094026 YP_624816.1 CDS Bcen_4968 NC_008061.1 2235470 2236594 R PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_B2928 secretion protein, HlyD family; secretion protein HlyD complement(2235470..2236594) Burkholderia cenocepacia AU 1054 4094027 YP_624817.1 CDS Bcen_4969 NC_008061.1 2236654 2238147 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2929 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT complement(2236654..2238147) Burkholderia cenocepacia AU 1054 4094028 YP_624818.1 CDS Bcen_4970 NC_008061.1 2238204 2239037 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B2930 transcriptional regulator, AraC family; AraC family transcriptional regulator 2238204..2239037 Burkholderia cenocepacia AU 1054 4094029 YP_624819.1 CDS Bcen_4971 NC_008061.1 2239157 2240143 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2931 transcriptional regulator, LysR family; LysR family transcriptional regulator 2239157..2240143 Burkholderia cenocepacia AU 1054 4094030 YP_624820.1 CDS Bcen_4972 NC_008061.1 2240172 2240660 R KEGG: psp:PSPPH_5091 hypothetical protein; hypothetical protein complement(2240172..2240660) Burkholderia cenocepacia AU 1054 4094031 YP_624821.1 CDS Bcen_4973 NC_008061.1 2240716 2244282 R TIGRFAM: Amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; KEGG: psb:Psyr_5011 amino acid adenylation:thioester reductase; amino acid adenylation complement(2240716..2244282) Burkholderia cenocepacia AU 1054 4094032 YP_624822.1 CDS Bcen_4974 NC_008061.1 2244292 2245218 R KEGG: pfo:Pfl_0127 hypothetical protein; hypothetical protein complement(2244292..2245218) Burkholderia cenocepacia AU 1054 4094033 YP_624823.1 CDS Bcen_4975 NC_008061.1 2245215 2245604 R PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_B2409 hypothetical protein; cupin complement(2245215..2245604) Burkholderia cenocepacia AU 1054 4094034 YP_624824.1 CDS Bcen_4976 NC_008061.1 2245601 2246383 R KEGG: psb:Psyr_5009 hypothetical protein; hypothetical protein complement(2245601..2246383) Burkholderia cenocepacia AU 1054 4094035 YP_624825.1 CDS Bcen_4977 NC_008061.1 2246781 2248142 D PFAM: condensation domain; KEGG: sma:SAV603 non-ribosomal peptide synthetase; condensation domain-containing protein 2246781..2248142 Burkholderia cenocepacia AU 1054 4094036 YP_624826.1 CDS Bcen_4978 NC_008061.1 2248199 2249545 D PFAM: aminotransferase class-III; KEGG: bte:BTH_II1536 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; hypothetical protein 2248199..2249545 Burkholderia cenocepacia AU 1054 4094037 YP_624827.1 CDS Bcen_4979 NC_008061.1 2249569 2250384 R PFAM: helix-turn-helix, AraC type; KEGG: pfl:PFL_4124 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2249569..2250384) Burkholderia cenocepacia AU 1054 4094038 YP_624828.1 CDS Bcen_4980 NC_008061.1 2250581 2251294 D PFAM: regulatory protein, LuxR; KEGG: N-acyl-homoserine lactone dependent regulatory protein; LuxR family transcriptional regulator 2250581..2251294 Burkholderia cenocepacia AU 1054 4094039 YP_624829.1 CDS Bcen_4981 NC_008061.1 2251366 2253078 R KEGG: bur:Bcep18194_B2932 yeast 2-isopropylmalate synthase TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase complement(2251366..2253078) Burkholderia cenocepacia AU 1054 4094137 YP_624830.1 CDS Bcen_4982 NC_008061.1 2254035 2254424 D KEGG: bur:Bcep18194_B2933 hypothetical protein; hypothetical protein 2254035..2254424 Burkholderia cenocepacia AU 1054 4094138 YP_624831.1 CDS Bcen_4983 NC_008061.1 2254539 2255357 D PFAM: Fucose-binding lectin II; KEGG: bur:Bcep18194_B2934 hypothetical protein; fucose-binding lectin II 2254539..2255357 Burkholderia cenocepacia AU 1054 4094139 YP_624832.1 CDS Bcen_4984 NC_008061.1 2255520 2256254 D PFAM: Fucose-binding lectin II; KEGG: bur:Bcep18194_B2935 hypothetical protein; fucose-binding lectin II 2255520..2256254 Burkholderia cenocepacia AU 1054 4094140 YP_624833.1 CDS Bcen_4985 NC_008061.1 2256412 2259693 R TIGRFAM: Outer membrane autotransporter barrel; PFAM: Autotransporter beta-domain; KEGG: bur:Bcep18194_B2939 outer membrane autotransporter barrel; Outer membrane autotransporter barrel complement(2256412..2259693) Burkholderia cenocepacia AU 1054 4094141 YP_624834.1 CDS Bcen_4986 NC_008061.1 2260235 2260801 R PFAM: cytochrome B561; KEGG: xac:XAC3991 cytochrome b561; cytochrome B561 complement(2260235..2260801) Burkholderia cenocepacia AU 1054 4094142 YP_624835.1 CDS Bcen_4987 NC_008061.1 2260798 2261853 R PFAM: Catalase-like; KEGG: xcb:XC_3993 catalase; catalase-like complement(2260798..2261853) Burkholderia cenocepacia AU 1054 4094143 YP_624836.1 CDS Bcen_4988 NC_008061.1 2262222 2263595 R PFAM: peptidase M23B; KEGG: bur:Bcep18194_B2941 peptidase M23B; peptidase M23B complement(2262222..2263595) Burkholderia cenocepacia AU 1054 4094144 YP_624837.1 CDS Bcen_4989 NC_008061.1 2263780 2264745 D PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_B2942 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel 2263780..2264745 Burkholderia cenocepacia AU 1054 4094145 YP_624838.1 CDS Bcen_4990 NC_008061.1 2264904 2265044 D KEGG: bur:Bcep18194_B2948 transcriptional regulator, AsnC family; hypothetical protein 2264904..2265044 Burkholderia cenocepacia AU 1054 4094146 YP_624839.1 CDS Bcen_4991 NC_008061.1 2265100 2265420 D KEGG: bur:Bcep18194_B2949 hypothetical protein; hypothetical protein 2265100..2265420 Burkholderia cenocepacia AU 1054 4094147 YP_624840.1 CDS Bcen_4992 NC_008061.1 2265940 2267601 D malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 2265940..2267601 Burkholderia cenocepacia AU 1054 4094148 YP_624841.1 CDS Bcen_4993 NC_008061.1 2267901 2268098 D KEGG: bur:Bcep18194_B2951 hypothetical protein; hypothetical protein 2267901..2268098 Burkholderia cenocepacia AU 1054 4094149 YP_624842.1 CDS Bcen_4994 NC_008061.1 2268095 2269492 D exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 2268095..2269492 Burkholderia cenocepacia AU 1054 4094150 YP_624843.1 CDS Bcen_4995 NC_008061.1 2269543 2270370 R KEGG: bur:Bcep18194_B2974 ABC phosphate/phosphonate transporter, periplasmic ligand binding protein; phosphate/phosphonate ABC transporter substrate-binding protein complement(2269543..2270370) Burkholderia cenocepacia AU 1054 4094151 YP_624844.1 CDS Bcen_4996 NC_008061.1 2270614 2271639 D PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_B2975 fatty acid desaturase; fatty acid desaturase 2270614..2271639 Burkholderia cenocepacia AU 1054 4094152 YP_624845.1 CDS Bcen_4997 NC_008061.1 2271815 2273023 D TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: bur:Bcep18194_B2976 benzoate membrane transport protein; benzoate transporter 2271815..2273023 Burkholderia cenocepacia AU 1054 4094153 YP_624846.1 CDS Bcen_4998 NC_008061.1 2273096 2273455 R PFAM: OmpA/MotB; KEGG: bur:Bcep18194_B0993 outer membrane protein, OmpA/MotB family; OmpA/MotB protein complement(2273096..2273455) Burkholderia cenocepacia AU 1054 4094154 YP_624847.1 CDS Bcen_4999 NC_008061.1 2273662 2274555 R PFAM: NmrA-like; KEGG: bur:Bcep18194_B2980 NmrA-like protein; NmrA-like complement(2273662..2274555) Burkholderia cenocepacia AU 1054 4094155 YP_624848.1 CDS Bcen_5000 NC_008061.1 2274785 2275702 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B2981 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2274785..2275702) Burkholderia cenocepacia AU 1054 4094253 YP_624849.1 CDS Bcen_5001 NC_008061.1 2275829 2276089 D KEGG: bur:Bcep18194_B2982 hypothetical protein; hypothetical protein 2275829..2276089 Burkholderia cenocepacia AU 1054 4094254 YP_624850.1 CDS Bcen_5002 NC_008061.1 2276110 2277063 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B2983 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2276110..2277063) Burkholderia cenocepacia AU 1054 4094255 YP_624851.1 CDS Bcen_5003 NC_008061.1 2277164 2278522 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B2984 NADH dehydrogenase, FAD-containing subunit; NADH dehydrogenase 2277164..2278522 Burkholderia cenocepacia AU 1054 4094256 YP_624852.1 CDS Bcen_5004 NC_008061.1 2278849 2279283 D KEGG: bur:Bcep18194_B2985 hypothetical protein; hypothetical protein 2278849..2279283 Burkholderia cenocepacia AU 1054 4094257 YP_624853.1 CDS Bcen_5005 NC_008061.1 2279466 2281091 D PFAM: histidine acid phosphatase; KEGG: bur:Bcep18194_B2986 histidine acid phosphatase; histidine acid phosphatase 2279466..2281091 Burkholderia cenocepacia AU 1054 4094258 YP_624854.1 CDS Bcen_5006 NC_008061.1 2281290 2281598 D KEGG: bur:Bcep18194_B2990 hypothetical protein; hypothetical protein 2281290..2281598 Burkholderia cenocepacia AU 1054 4094259 YP_624855.1 CDS Bcen_5007 NC_008061.1 2281624 2281917 R KEGG: bur:Bcep18194_B2991 hypothetical protein; hypothetical protein complement(2281624..2281917) Burkholderia cenocepacia AU 1054 4094260 YP_624856.1 CDS Bcen_5008 NC_008061.1 2282324 2283928 D PFAM: EAL; KEGG: bur:Bcep18194_B2992 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 2282324..2283928 Burkholderia cenocepacia AU 1054 4094261 YP_624857.1 CDS Bcen_5009 NC_008061.1 2283947 2284318 R KEGG: bps:BPSS2027 hypothetical protein; hypothetical protein complement(2283947..2284318) Burkholderia cenocepacia AU 1054 4094262 YP_624858.1 CDS Bcen_5010 NC_008061.1 2284548 2285567 D transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 2284548..2285567 Burkholderia cenocepacia AU 1054 4094263 YP_624859.1 CDS Bcen_5011 NC_008061.1 2285709 2286005 D KEGG: bur:Bcep18194_B3000 hypothetical protein; hypothetical protein 2285709..2286005 Burkholderia cenocepacia AU 1054 4094264 YP_624860.1 CDS Bcen_5012 NC_008061.1 2286085 2288469 D Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 2286085..2288469 Burkholderia cenocepacia AU 1054 4094265 YP_624861.1 CDS Bcen_5013 NC_008061.1 2289051 2289308 D KEGG: bur:Bcep18194_B3004 hypothetical protein; hypothetical protein 2289051..2289308 Burkholderia cenocepacia AU 1054 4094266 YP_624862.1 CDS Bcen_5014 NC_008061.1 2289418 2290545 D PFAM: heat shock protein DnaJ-like; KEGG: bur:Bcep18194_B3003 hypothetical protein; heat shock protein DnaJ-like 2289418..2290545 Burkholderia cenocepacia AU 1054 4094267 YP_624863.1 CDS Bcen_5015 NC_008061.1 2290591 2291496 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B3034 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2290591..2291496) Burkholderia cenocepacia AU 1054 4094268 YP_624864.1 CDS Bcen_5016 NC_008061.1 2291576 2292820 R PFAM: acyl-CoA dehydrogenase-like; KEGG: bur:Bcep18194_B3035 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase complement(2291576..2292820) Burkholderia cenocepacia AU 1054 4094269 YP_624865.1 CDS Bcen_5017 NC_008061.1 2292861 2293619 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B3036 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2292861..2293619) Burkholderia cenocepacia AU 1054 4094270 YP_624866.1 CDS Bcen_5018 NC_008061.1 2293627 2294391 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B3037 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(2293627..2294391) Burkholderia cenocepacia AU 1054 4094271 YP_624867.1 CDS Bcen_5019 NC_008061.1 2294470 2295501 R PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_B3038 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase complement(2294470..2295501) Burkholderia cenocepacia AU 1054 4094272 YP_624868.1 CDS Bcen_5020 NC_008061.1 2295521 2296195 R PFAM: Phosphoglycerate mutase; KEGG: bur:Bcep18194_B3039 phosphoglycerate/bisphosphoglycerate mutase; phosphoglycerate mutase complement(2295521..2296195) Burkholderia cenocepacia AU 1054 4093886 YP_624869.1 CDS Bcen_5021 NC_008061.1 2296365 2296571 D KEGG: cvi:CV1903 hypothetical protein; hypothetical protein 2296365..2296571 Burkholderia cenocepacia AU 1054 4093887 YP_624870.1 CDS Bcen_5022 NC_008061.1 2296692 2296847 D KEGG: dar:Daro_2051 conserved hypothetical transmembrane protein; hypothetical protein 2296692..2296847 Burkholderia cenocepacia AU 1054 4093888 YP_624871.1 CDS Bcen_5023 NC_008061.1 2296976 2297353 R KEGG: bur:Bcep18194_B3042 hypothetical protein; hypothetical protein complement(2296976..2297353) Burkholderia cenocepacia AU 1054 4093889 YP_624872.1 CDS Bcen_5024 NC_008061.1 2297411 2298400 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B3043 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2297411..2298400) Burkholderia cenocepacia AU 1054 4093890 YP_624873.1 CDS Bcen_5025 NC_008061.1 2298538 2299575 R PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B3044 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase complement(2298538..2299575) Burkholderia cenocepacia AU 1054 4093891 YP_624874.1 CDS Bcen_5026 NC_008061.1 2299694 2300641 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B3045 transcriptional regulator, LysR family; LysR family transcriptional regulator 2299694..2300641 Burkholderia cenocepacia AU 1054 4093892 YP_624875.1 CDS Bcen_5027 NC_008061.1 2300666 2303431 R PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B3046 ATP-dependent transcriptional regulator, MalT-like, LuxR family; ATP-dependent transcription regulator LuxR complement(2300666..2303431) Burkholderia cenocepacia AU 1054 4093893 YP_624876.1 CDS Bcen_5028 NC_008061.1 2303729 2305408 R PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_B3048 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2303729..2305408) Burkholderia cenocepacia AU 1054 4093894 YP_624877.1 CDS Bcen_5029 NC_008061.1 2305759 2306640 D Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; chaperone protein HchA 2305759..2306640 Burkholderia cenocepacia AU 1054 4093895 YP_624878.1 CDS Bcen_5030 NC_008061.1 2306703 2307992 R PFAM: acyl-CoA dehydrogenase-like; KEGG: reu:Reut_C6400 acyl-CoA dehydrogenase, C-terminal; acyl-CoA dehydrogenase complement(2306703..2307992) Burkholderia cenocepacia AU 1054 4093896 YP_624879.1 CDS Bcen_5031 NC_008061.1 2308166 2308942 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_C6843 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2308166..2308942) Burkholderia cenocepacia AU 1054 4093897 YP_624880.1 CDS Bcen_5032 NC_008061.1 2309011 2310495 R PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6842 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2309011..2310495) Burkholderia cenocepacia AU 1054 4093898 YP_624881.1 CDS Bcen_5033 NC_008061.1 2310507 2311748 R PFAM: Thiolase; KEGG: reu:Reut_C6395 thiolase; thiolase complement(2310507..2311748) Burkholderia cenocepacia AU 1054 4093899 YP_624882.1 CDS Bcen_5034 NC_008061.1 2311774 2313327 R PFAM: AMP-dependent synthetase and ligase; KEGG: reu:Reut_C6394 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2311774..2313327) Burkholderia cenocepacia AU 1054 4093900 YP_624883.1 CDS Bcen_5035 NC_008061.1 2313370 2314500 R PFAM: Saccharopine dehydrogenase; KEGG: reu:Reut_C6392 saccharopine dehydrogenase:NmrA-like; saccharopine dehydrogenase complement(2313370..2314500) Burkholderia cenocepacia AU 1054 4093901 YP_624884.1 CDS Bcen_5036 NC_008061.1 2314674 2315345 R KEGG: bur:Bcep18194_C6830 cytochrome c, class I; cytochrome c, class I complement(2314674..2315345) Burkholderia cenocepacia AU 1054 4093902 YP_624885.1 CDS Bcen_5037 NC_008061.1 2315346 2316827 R PFAM: amine oxidase; KEGG: bur:Bcep18194_C6829 amine oxidase; amine oxidase (flavin-containing) complement(2315346..2316827) Burkholderia cenocepacia AU 1054 4093903 YP_624886.1 CDS Bcen_5038 NC_008061.1 2316872 2317840 R PFAM: glycosyl hydrolase, BNR repeat; KEGG: bur:Bcep18194_C6841 hypothetical protein; BNR repeat-containing glycosyl hydrolase complement(2316872..2317840) Burkholderia cenocepacia AU 1054 4093904 YP_624887.1 CDS Bcen_5039 NC_008061.1 2317873 2318118 R hypothetical protein complement(2317873..2318118) Burkholderia cenocepacia AU 1054 4094000 YP_624888.1 CDS Bcen_5040 NC_008061.1 2318189 2320549 R KEGG: bur:Bcep18194_C6840 exporter, RND superfamily; RND efflux transporter complement(2318189..2320549) Burkholderia cenocepacia AU 1054 4094001 YP_624889.1 CDS Bcen_5041 NC_008061.1 2320611 2322455 R PFAM: protein of unknown function DUF1302; KEGG: bur:Bcep18194_C6839 protein of unknown function DUF1302; hypothetical protein complement(2320611..2322455) Burkholderia cenocepacia AU 1054 4094002 YP_624890.1 CDS Bcen_5042 NC_008061.1 2322534 2324033 R PFAM: protein of unknown function DUF1329; KEGG: bur:Bcep18194_C6838 protein of unknown function DUF1329; hypothetical protein complement(2322534..2324033) Burkholderia cenocepacia AU 1054 4094003 YP_624891.1 CDS Bcen_5043 NC_008061.1 2324114 2324527 R PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_C6837 endoribonuclease L-PSP; endoribonuclease L-PSP complement(2324114..2324527) Burkholderia cenocepacia AU 1054 4094004 YP_624892.1 CDS Bcen_5044 NC_008061.1 2324544 2325377 R PFAM: Phytanoyl-CoA dioxygenase; KEGG: bur:Bcep18194_C6836 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase complement(2324544..2325377) Burkholderia cenocepacia AU 1054 4094005 YP_624893.1 CDS Bcen_5045 NC_008061.1 2325622 2326242 R PFAM: regulatory protein, TetR; KEGG: bpm:BURPS1710b_2294 TetR-family regulatory protein; TetR family transcriptional regulator complement(2325622..2326242) Burkholderia cenocepacia AU 1054 4094006 YP_624894.1 CDS Bcen_5046 NC_008061.1 2326316 2326990 R KEGG: bur:Bcep18194_C6835 hypothetical protein; hypothetical protein complement(2326316..2326990) Burkholderia cenocepacia AU 1054 4094007 YP_624895.1 CDS Bcen_5047 NC_008061.1 2327026 2327685 R PFAM: cytochrome c, class I; KEGG: reu:Reut_C6402 cytochrome c, class I; cytochrome c, class I complement(2327026..2327685) Burkholderia cenocepacia AU 1054 4094008 YP_624896.1 CDS Bcen_5048 NC_008061.1 2327696 2329432 R KEGG: bur:Bcep18194_C6833 amine oxidase TIGRFAM: Twin-arginine translocation pathway signal; PFAM: amine oxidase; FAD dependent oxidoreductase; twin-arginine translocation pathway signal complement(2327696..2329432) Burkholderia cenocepacia AU 1054 4094009 YP_624897.1 CDS Bcen_5049 NC_008061.1 2329579 2330358 D PFAM: response regulator receiver; KEGG: bur:Bcep18194_B3050 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2329579..2330358 Burkholderia cenocepacia AU 1054 4094010 YP_624898.1 CDS Bcen_5050 NC_008061.1 2330355 2331440 D PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_B3051 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase 2330355..2331440 Burkholderia cenocepacia AU 1054 4094011 YP_624899.1 CDS Bcen_5051 NC_008061.1 2331475 2332158 R KEGG: bur:Bcep18194_B3052 hypothetical protein; hypothetical protein complement(2331475..2332158) Burkholderia cenocepacia AU 1054 4094012 YP_624900.1 CDS Bcen_5052 NC_008061.1 2332340 2333611 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B3053 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 2332340..2333611 Burkholderia cenocepacia AU 1054 4094013 YP_624901.1 CDS Bcen_5053 NC_008061.1 2333823 2334770 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B3054 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2333823..2334770) Burkholderia cenocepacia AU 1054 4094014 YP_624902.1 CDS pdxA NC_008061.1 2334885 2335940 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 2334885..2335940 Burkholderia cenocepacia AU 1054 4094015 YP_624903.1 CDS Bcen_5055 NC_008061.1 2335990 2337162 D PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: bur:Bcep18194_B3056 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing-like protein 2335990..2337162 Burkholderia cenocepacia AU 1054 4094016 YP_624904.1 CDS Bcen_5056 NC_008061.1 2337171 2338088 D PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_B3057 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2337171..2338088 Burkholderia cenocepacia AU 1054 4094017 YP_624905.1 CDS Bcen_5057 NC_008061.1 2338219 2339511 D PFAM: General substrate transporter; KEGG: bur:Bcep18194_B3058 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 2338219..2339511 Burkholderia cenocepacia AU 1054 4094018 YP_624906.1 CDS Bcen_5058 NC_008061.1 2339553 2340500 D KEGG: bur:Bcep18194_B3059 hypothetical protein; hypothetical protein 2339553..2340500 Burkholderia cenocepacia AU 1054 4094019 YP_624907.1 CDS Bcen_5059 NC_008061.1 2340502 2341461 D PFAM: amidohydrolase 2; KEGG: bur:Bcep18194_B3060 amidohydrolase 2; amidohydrolase 2 2340502..2341461 Burkholderia cenocepacia AU 1054 4094118 YP_624908.1 CDS Bcen_5060 NC_008061.1 2341671 2342936 D PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_B3065 ABC sugar transporter, periplasmic ligand binding protein; extracellular solute-binding protein 2341671..2342936 Burkholderia cenocepacia AU 1054 4094119 YP_624909.1 CDS Bcen_5061 NC_008061.1 2342920 2343879 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B3066 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2342920..2343879 Burkholderia cenocepacia AU 1054 4094120 YP_624910.1 CDS Bcen_5062 NC_008061.1 2343879 2344700 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B3067 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 2343879..2344700 Burkholderia cenocepacia AU 1054 4094121 YP_624911.1 CDS Bcen_5063 NC_008061.1 2344711 2345745 D PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B3068 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase GroES-like protein 2344711..2345745 Burkholderia cenocepacia AU 1054 4094122 YP_624912.1 CDS Bcen_5064 NC_008061.1 2345749 2346942 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_B3069 ABC sugar transporter, ATPase subunit; ABC transporter 2345749..2346942 Burkholderia cenocepacia AU 1054 4094123 YP_624913.1 CDS Bcen_5065 NC_008061.1 2346972 2347910 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B3070 transcriptional regulator, AraC family; AraC family transcriptional regulator 2346972..2347910 Burkholderia cenocepacia AU 1054 4094124 YP_624914.1 CDS Bcen_5066 NC_008061.1 2347907 2349373 D TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: bur:Bcep18194_B3071 xylulokinase; xylulokinase 2347907..2349373 Burkholderia cenocepacia AU 1054 4094125 YP_624915.1 CDS Bcen_5067 NC_008061.1 2349461 2350516 D PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_B3072 transcriptional regulator, MerR family; MerR family transcriptional regulator 2349461..2350516 Burkholderia cenocepacia AU 1054 4094126 YP_624916.1 CDS Bcen_5068 NC_008061.1 2350548 2350835 D PFAM: Barstar (barnase inhibitor); KEGG: pfl:PFL_2382 possible ribonuclease inhibitor; barstar (barnase inhibitor) 2350548..2350835 Burkholderia cenocepacia AU 1054 4094127 YP_624917.1 CDS Bcen_5069 NC_008061.1 2350948 2351763 R KEGG: bur:Bcep18194_B3077 esterase/lipase-like; esterase/lipase-like protein complement(2350948..2351763) Burkholderia cenocepacia AU 1054 4094128 YP_624918.1 CDS Bcen_5070 NC_008061.1 2351777 2353069 R PFAM: MASE1; KEGG: bur:Bcep18194_B3078 integral membrane sensor protein; integral membrane sensor protein complement(2351777..2353069) Burkholderia cenocepacia AU 1054 4094129 YP_624919.1 CDS Bcen_5072 NC_008061.1 2354374 2354811 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B3082 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2354374..2354811 Burkholderia cenocepacia AU 1054 4094131 YP_624920.1 CDS Bcen_5073 NC_008061.1 2354843 2355673 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bur:Bcep18194_B3083 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2354843..2355673) Burkholderia cenocepacia AU 1054 4094132 YP_624921.1 CDS Bcen_5074 NC_008061.1 2355967 2357901 R KEGG: bur:Bcep18194_B3085 hypothetical protein; hypothetical protein complement(2355967..2357901) Burkholderia cenocepacia AU 1054 4094133 YP_624922.1 CDS Bcen_5075 NC_008061.1 2358357 2359655 R PFAM: sodium:dicarboxylate symporter; KEGG: bur:Bcep18194_B3086 sodium/dicarboxylate symporter; sodium:dicarboxylate symporter complement(2358357..2359655) Burkholderia cenocepacia AU 1054 4094134 YP_624923.1 CDS Bcen_5076 NC_008061.1 2360007 2360636 R PFAM: regulatory protein, TetR; KEGG: gvi:glr1417 TetR family transcriptional regulatory protein; TetR family transcriptional regulator complement(2360007..2360636) Burkholderia cenocepacia AU 1054 4094135 YP_624924.1 CDS Bcen_5077 NC_008061.1 2360879 2362111 D PFAM: glycosyl transferase, group 1; KEGG: bur:Bcep18194_B3087 glycosyl transferase, group 1; group 1 glycosyl transferase 2360879..2362111 Burkholderia cenocepacia AU 1054 4094136 YP_624925.1 CDS Bcen_5078 NC_008061.1 2362108 2362668 D KEGG: bur:Bcep18194_B3088 hypothetical protein; hypothetical protein 2362108..2362668 Burkholderia cenocepacia AU 1054 4094233 YP_624926.1 CDS Bcen_5079 NC_008061.1 2362692 2363426 D PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_B3089 polysaccharide deacetylase; polysaccharide deacetylase 2362692..2363426 Burkholderia cenocepacia AU 1054 4094234 YP_624927.1 CDS Bcen_5080 NC_008061.1 2363559 2364806 R KEGG: bur:Bcep18194_A3367 hypothetical protein; hypothetical protein complement(2363559..2364806) Burkholderia cenocepacia AU 1054 4094235 YP_624928.1 CDS Bcen_5081 NC_008061.1 2364812 2365324 R KEGG: bur:Bcep18194_A3366 hypothetical protein; hypothetical protein complement(2364812..2365324) Burkholderia cenocepacia AU 1054 4094236 YP_624929.1 CDS Bcen_5082 NC_008061.1 2365732 2366457 R PFAM: OmpW; KEGG: bpm:BURPS1710b_3720 outer membrane protein, OmpW family; OmpW complement(2365732..2366457) Burkholderia cenocepacia AU 1054 4094237 YP_624930.1 CDS Bcen_5083 NC_008061.1 2366559 2368520 R activates fatty acids by binding to coenzyme A; AMP-binding protein complement(2366559..2368520) Burkholderia cenocepacia AU 1054 4094238 YP_624931.1 CDS Bcen_5084 NC_008061.1 2368517 2369473 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: lil:LA1074 fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase complement(2368517..2369473) Burkholderia cenocepacia AU 1054 4094239 YP_624932.1 CDS Bcen_5085 NC_008061.1 2369510 2370580 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sma:SAV565 2,3-dihydroxybiphenyl-1,2-dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2369510..2370580) Burkholderia cenocepacia AU 1054 4094240 YP_624933.1 CDS Bcen_5086 NC_008061.1 2370588 2372300 R PFAM: monooxygenase, FAD-binding; KEGG: reu:Reut_B5808 monooxygenase, FAD-binding:FAD dependent oxidoreductase; FAD-binding monooxygenase complement(2370588..2372300) Burkholderia cenocepacia AU 1054 4094241 YP_624934.1 CDS Bcen_5087 NC_008061.1 2372401 2373180 D PFAM: regulatory protein, TetR; KEGG: cgb:cg1308 bacterial regulatory proteins, TetR family; TetR family transcriptional regulator 2372401..2373180 Burkholderia cenocepacia AU 1054 4094242 YP_624935.1 CDS Bcen_5088 NC_008061.1 2373418 2374677 R PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_0659 major facilitator superfamily MFS_1; major facilitator transporter complement(2373418..2374677) Burkholderia cenocepacia AU 1054 4094243 YP_624936.1 CDS Bcen_5089 NC_008061.1 2374684 2375412 R KEGG: psp:PSPPH_4556 hypothetical protein; hypothetical protein complement(2374684..2375412) Burkholderia cenocepacia AU 1054 4094244 YP_624937.1 CDS Bcen_5090 NC_008061.1 2375417 2376778 R PFAM: protein of unknown function DUF201; KEGG: psp:PSPPH_4555 hypothetical protein; hypothetical protein complement(2375417..2376778) Burkholderia cenocepacia AU 1054 4094245 YP_624938.1 CDS Bcen_5091 NC_008061.1 2376826 2378016 R TIGRFAM: Protein of unknown function DUF160; PFAM: Radical SAM; KEGG: psp:PSPPH_4554 arginine aminomutase; hypothetical protein complement(2376826..2378016) Burkholderia cenocepacia AU 1054 4094246 YP_624939.1 CDS Bcen_5092 NC_008061.1 2378356 2378733 D hypothetical protein 2378356..2378733 Burkholderia cenocepacia AU 1054 4094247 YP_624940.1 CDS Bcen_5093 NC_008061.1 2380180 2380464 R KEGG: bpm:BURPS1710b_1292 hypothetical protein; hypothetical protein complement(2380180..2380464) Burkholderia cenocepacia AU 1054 4094248 YP_624941.1 CDS Bcen_5094 NC_008061.1 2380538 2380804 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2380538..2380804) Burkholderia cenocepacia AU 1054 4094249 YP_624942.1 CDS Bcen_5095 NC_008061.1 2381301 2381504 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: bur:Bcep18194_B1449 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(2381301..2381504) Burkholderia cenocepacia AU 1054 4094250 YP_624943.1 CDS Bcen_5096 NC_008061.1 2382228 2382467 D hypothetical protein 2382228..2382467 Burkholderia cenocepacia AU 1054 4094251 YP_624944.1 CDS Bcen_5097 NC_008061.1 2382536 2382775 D KEGG: bpm:BURPS1710b_1293 hypothetical protein; hypothetical protein 2382536..2382775 Burkholderia cenocepacia AU 1054 4094252 YP_624945.1 CDS Bcen_5098 NC_008061.1 2382843 2383100 D hypothetical protein 2382843..2383100 Burkholderia cenocepacia AU 1054 4095242 YP_624946.1 CDS Bcen_5099 NC_008061.1 2383047 2383307 R KEGG: bte:BTH_I0503 hypothetical protein; hypothetical protein complement(2383047..2383307) Burkholderia cenocepacia AU 1054 4095243 YP_624947.1 CDS Bcen_5100 NC_008061.1 2383470 2383787 R KEGG: bur:Bcep18194_C7367 hypothetical protein; hypothetical protein complement(2383470..2383787) Burkholderia cenocepacia AU 1054 4095244 YP_624948.1 CDS Bcen_5101 NC_008061.1 2383836 2384126 D hypothetical protein 2383836..2384126 Burkholderia cenocepacia AU 1054 4095245 YP_624949.1 CDS Bcen_5102 NC_008061.1 2385266 2386285 R PFAM: Integrase, catalytic region; KEGG: vvu:VV21151 transposase; integrase catalytic subunit complement(2385266..2386285) Burkholderia cenocepacia AU 1054 4095246 YP_624950.1 CDS Bcen_5103 NC_008061.1 2386381 2386665 D hypothetical protein 2386381..2386665 Burkholderia cenocepacia AU 1054 4095247 YP_624951.1 CDS Bcen_5104 NC_008061.1 2387642 2388373 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: nmu:Nmul_A1182 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator complement(2387642..2388373) Burkholderia cenocepacia AU 1054 4095248 YP_624952.1 CDS Bcen_5105 NC_008061.1 2388946 2389212 R KEGG: reu:Reut_B5753 hypothetical protein; hypothetical protein complement(2388946..2389212) Burkholderia cenocepacia AU 1054 4095249 YP_624953.1 CDS Bcen_5106 NC_008061.1 2390021 2390638 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B3122 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 2390021..2390638 Burkholderia cenocepacia AU 1054 4095250 YP_624954.1 CDS Bcen_5107 NC_008061.1 2390747 2390995 D KEGG: bur:Bcep18194_B3123 hypothetical protein; hypothetical protein 2390747..2390995 Burkholderia cenocepacia AU 1054 4095251 YP_624955.1 CDS Bcen_5108 NC_008061.1 2391127 2392485 R PFAM: General substrate transporter; KEGG: bur:Bcep18194_B3124 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2391127..2392485) Burkholderia cenocepacia AU 1054 4095252 YP_624956.1 CDS Bcen_5109 NC_008061.1 2392678 2393067 R TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B3125 carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase complement(2392678..2393067) Burkholderia cenocepacia AU 1054 4095253 YP_624957.1 CDS Bcen_5110 NC_008061.1 2393078 2393863 R TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B3126 alpha/beta hydrolase; 3-oxoadipate enol-lactonase complement(2393078..2393863) Burkholderia cenocepacia AU 1054 4095254 YP_624958.1 CDS Bcen_5111 NC_008061.1 2393880 2395100 R Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase complement(2393880..2395100) Burkholderia cenocepacia AU 1054 4095255 YP_624959.1 CDS Bcen_5112 NC_008061.1 2395325 2395981 R KEGG: bur:Bcep18194_B3128 3-oxoadipate CoA-transferase TIGRFAM: 3-oxoacid CoA-transferase, subunit B; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(2395325..2395981) Burkholderia cenocepacia AU 1054 4095256 YP_624960.1 CDS Bcen_5113 NC_008061.1 2396002 2396718 R KEGG: bur:Bcep18194_B3129 3-oxoadipate CoA-transferase TIGRFAM: 3-oxoacid CoA-transferase, subunit A; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(2396002..2396718) Burkholderia cenocepacia AU 1054 4095257 YP_624961.1 CDS Bcen_5114 NC_008061.1 2396863 2398095 R catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase complement(2396863..2398095) Burkholderia cenocepacia AU 1054 4095258 YP_624962.1 CDS Bcen_5115 NC_008061.1 2398213 2399139 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B3131 transcriptional regulator, LysR family; LysR family transcriptional regulator 2398213..2399139 Burkholderia cenocepacia AU 1054 4095259 YP_624963.1 CDS folE NC_008061.1 2399236 2399871 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2399236..2399871 Burkholderia cenocepacia AU 1054 4095260 YP_624964.1 CDS Bcen_5117 NC_008061.1 2399871 2400674 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B3133 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2399871..2400674 Burkholderia cenocepacia AU 1054 4095124 YP_624965.1 CDS Bcen_5118 NC_008061.1 2400838 2401758 R KEGG: bur:Bcep18194_B3134 serine O-acetyltransferase; Serine O-acetyltransferase complement(2400838..2401758) Burkholderia cenocepacia AU 1054 4095125 YP_624966.1 CDS Bcen_5119 NC_008061.1 2401896 2402129 R KEGG: bur:Bcep18194_B3135 hypothetical protein; hypothetical protein complement(2401896..2402129) Burkholderia cenocepacia AU 1054 4095126 YP_624967.1 CDS Bcen_5120 NC_008061.1 2402408 2402815 D KEGG: bur:Bcep18194_B3136 hypothetical protein; hypothetical protein 2402408..2402815 Burkholderia cenocepacia AU 1054 4095127 YP_624968.1 CDS Bcen_5121 NC_008061.1 2403344 2403811 D PFAM: UspA; KEGG: bur:Bcep18194_B3137 universal stress protein, UspA family; hypothetical protein 2403344..2403811 Burkholderia cenocepacia AU 1054 4095128 YP_624969.1 CDS Bcen_5122 NC_008061.1 2403915 2404661 D PFAM: cyclic nucleotide-binding; KEGG: bur:Bcep18194_B3138 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 2403915..2404661 Burkholderia cenocepacia AU 1054 4095129 YP_624970.1 CDS Bcen_5123 NC_008061.1 2404710 2405603 R specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein complement(2404710..2405603) Burkholderia cenocepacia AU 1054 4095130 YP_624971.1 CDS Bcen_5124 NC_008061.1 2405713 2406333 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_B3140 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 2405713..2406333 Burkholderia cenocepacia AU 1054 4095131 YP_624972.1 CDS Bcen_5125 NC_008061.1 2406413 2408146 R KEGG: bte:BTH_II0937 hypothetical protein; hypothetical protein complement(2406413..2408146) Burkholderia cenocepacia AU 1054 4095132 YP_624973.1 CDS Bcen_5126 NC_008061.1 2408183 2408917 R hypothetical protein complement(2408183..2408917) Burkholderia cenocepacia AU 1054 4095133 YP_624974.1 CDS Bcen_5127 NC_008061.1 2408917 2409819 R KEGG: xoo:XOO3511 hypothetical protein; hypothetical protein complement(2408917..2409819) Burkholderia cenocepacia AU 1054 4095134 YP_624975.1 CDS Bcen_5128 NC_008061.1 2409833 2412337 R PFAM: Rhs element Vgr protein; KEGG: rso:RSc1944 VGR-related protein; Rhs element Vgr protein complement(2409833..2412337) Burkholderia cenocepacia AU 1054 4095135 YP_624976.1 CDS Bcen_5129 NC_008061.1 2412693 2413640 D PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B3141 aldo/keto reductase; aldo/keto reductase 2412693..2413640 Burkholderia cenocepacia AU 1054 4095136 YP_624977.1 CDS Bcen_5130 NC_008061.1 2413856 2414836 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B3145 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2413856..2414836) Burkholderia cenocepacia AU 1054 4095137 YP_624978.1 CDS Bcen_5131 NC_008061.1 2415013 2415546 D PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_B3146 hypothetical protein; cupin 2415013..2415546 Burkholderia cenocepacia AU 1054 4095138 YP_624979.1 CDS Bcen_5132 NC_008061.1 2415630 2416868 D PFAM: General substrate transporter; KEGG: bur:Bcep18194_B3147 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 2415630..2416868 Burkholderia cenocepacia AU 1054 4095139 YP_624980.1 CDS Bcen_5133 NC_008061.1 2416870 2417991 D PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B3148 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase GroES-like protein 2416870..2417991 Burkholderia cenocepacia AU 1054 4095140 YP_624981.1 CDS Bcen_5134 NC_008061.1 2417969 2418691 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B3149 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2417969..2418691 Burkholderia cenocepacia AU 1054 4095141 YP_624982.1 CDS Bcen_5135 NC_008061.1 2418874 2419965 D KEGG: bur:Bcep18194_B3150 outer membrane protein (porin); outer membrane protein (porin) 2418874..2419965 Burkholderia cenocepacia AU 1054 4095142 YP_624983.1 CDS Bcen_5136 NC_008061.1 2420039 2422276 R PFAM: protein of unknown function DUF181; KEGG: bps:BPSL0600 hypothetical protein; hypothetical protein complement(2420039..2422276) Burkholderia cenocepacia AU 1054 4095143 YP_624984.1 CDS Bcen_5137 NC_008061.1 2422371 2422733 R KEGG: bps:BPSL0599 hypothetical protein; hypothetical protein complement(2422371..2422733) Burkholderia cenocepacia AU 1054 4096292 YP_624985.1 CDS Bcen_5138 NC_008061.1 2422750 2423094 R KEGG: bte:BTH_I0515 hypothetical protein; hypothetical protein complement(2422750..2423094) Burkholderia cenocepacia AU 1054 4096293 YP_624986.1 CDS Bcen_5139 NC_008061.1 2423128 2427177 R PFAM: protein kinase; SMART: Tyrosine protein kinase; KEGG: bur:Bcep18194_B3160 serine/threonine protein kinase; serine/threonine protein kinase complement(2423128..2427177) Burkholderia cenocepacia AU 1054 4096294 YP_624987.1 CDS Bcen_5140 NC_008061.1 2427174 2428175 R PFAM: Forkhead-associated; KEGG: bur:Bcep18194_B3161 FHA domain containing protein; FHA domain-containing protein complement(2427174..2428175) Burkholderia cenocepacia AU 1054 4096295 YP_624988.1 CDS Bcen_5141 NC_008061.1 2428993 2429706 D PFAM: transcriptional regulator PadR-like; KEGG: bur:Bcep18194_B3162 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 2428993..2429706 Burkholderia cenocepacia AU 1054 4096296 YP_624989.1 CDS Bcen_5142 NC_008061.1 2429745 2430566 D PFAM: Siderophore-interacting protein; KEGG: bur:Bcep18194_B3163 siderophore-interacting protein; hypothetical protein 2429745..2430566 Burkholderia cenocepacia AU 1054 4096297 YP_624990.1 CDS Bcen_5143 NC_008061.1 2430716 2430949 D KEGG: bur:Bcep18194_B3164 hypothetical protein; hypothetical protein 2430716..2430949 Burkholderia cenocepacia AU 1054 4096298 YP_624991.1 CDS Bcen_5144 NC_008061.1 2430985 2431566 R PFAM: phosphoesterase, PA-phosphatase related; KEGG: bur:Bcep18194_B3165 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase complement(2430985..2431566) Burkholderia cenocepacia AU 1054 4096299 YP_624992.1 CDS Bcen_5145 NC_008061.1 2432001 2432741 D converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase 2432001..2432741 Burkholderia cenocepacia AU 1054 4096300 YP_624993.1 CDS Bcen_5146 NC_008061.1 2432794 2433579 D catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 2432794..2433579 Burkholderia cenocepacia AU 1054 4096301 YP_624994.1 CDS Bcen_5147 NC_008061.1 2433576 2434793 D PFAM: Patatin; KEGG: bur:Bcep18194_B3168 patatin; patatin 2433576..2434793 Burkholderia cenocepacia AU 1054 4096302 YP_624995.1 CDS Bcen_5148 NC_008061.1 2434854 2435318 D KEGG: bur:Bcep18194_B3169 hypothetical protein; hypothetical protein 2434854..2435318 Burkholderia cenocepacia AU 1054 4096303 YP_624996.1 CDS Bcen_5149 NC_008061.1 2435369 2436253 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B3170 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2435369..2436253) Burkholderia cenocepacia AU 1054 4096304 YP_624997.1 CDS Bcen_5150 NC_008061.1 2436374 2437315 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 2436374..2437315 Burkholderia cenocepacia AU 1054 4096305 YP_624998.1 CDS Bcen_5151 NC_008061.1 2437380 2438303 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B3172 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2437380..2438303) Burkholderia cenocepacia AU 1054 4096306 YP_624999.1 CDS Bcen_5152 NC_008061.1 2438419 2439504 D KEGG: bur:Bcep18194_B3173 tartrate dehydrogenase TIGRFAM: Tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 2438419..2439504 Burkholderia cenocepacia AU 1054 4096307 YP_625000.1 CDS Bcen_5153 NC_008061.1 2439756 2440010 D hypothetical protein 2439756..2440010 Burkholderia cenocepacia AU 1054 4096308 YP_625001.1 CDS Bcen_5154 NC_008061.1 2439980 2440459 R PFAM: protein of unknown function DUF1348; KEGG: bur:Bcep18194_B3174 protein of unknown function DUF1348; hypothetical protein complement(2439980..2440459) Burkholderia cenocepacia AU 1054 4096309 YP_625002.1 CDS Bcen_5155 NC_008061.1 2440524 2441129 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B3175 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2440524..2441129) Burkholderia cenocepacia AU 1054 4096310 YP_625003.1 CDS Bcen_5156 NC_008061.1 2441262 2441504 D hypothetical protein 2441262..2441504 Burkholderia cenocepacia AU 1054 4095104 YP_625004.1 CDS tdh NC_008061.1 2441690 2442718 R converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase complement(2441690..2442718) Burkholderia cenocepacia AU 1054 4095105 YP_625005.1 CDS Bcen_5158 NC_008061.1 2442732 2443931 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(2442732..2443931) Burkholderia cenocepacia AU 1054 4095106 YP_625006.1 CDS Bcen_5159 NC_008061.1 2444090 2444701 D PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_B3180 transcriptional regulator, XRE family with cupin sensor domain; XRE family transcriptional regulator 2444090..2444701 Burkholderia cenocepacia AU 1054 4095107 YP_625007.1 CDS Bcen_5160 NC_008061.1 2444843 2445220 D KEGG: bur:Bcep18194_B3181 hypothetical protein; hypothetical protein 2444843..2445220 Burkholderia cenocepacia AU 1054 4095108 YP_625008.1 CDS Bcen_5161 NC_008061.1 2445323 2446342 D PFAM: phage integrase; KEGG: bur:Bcep18194_B0001 phage integrase; phage integrase 2445323..2446342 Burkholderia cenocepacia AU 1054 4095109 YP_625009.1 CDS Bcen_5162 NC_008061.1 2446478 2447659 R KEGG: bur:Bcep18194_B0002 hypothetical protein; hypothetical protein complement(2446478..2447659) Burkholderia cenocepacia AU 1054 4095110 YP_625010.1 CDS Bcen_5163 NC_008061.1 2448161 2449138 R hypothetical protein complement(2448161..2449138) Burkholderia cenocepacia AU 1054 4095111 YP_625011.1 CDS Bcen_5164 NC_008061.1 2449487 2450854 D KEGG: bur:Bcep18194_B0003 hypothetical protein; hypothetical protein 2449487..2450854 Burkholderia cenocepacia AU 1054 4095112 YP_625012.1 CDS Bcen_5165 NC_008061.1 2450947 2452008 R TIGRFAM: parB-like partition proteins; PFAM: ParB-like nuclease; KEGG: bur:Bcep18194_B0004 ParB-like partition protein; parB-like partition proteins complement(2450947..2452008) Burkholderia cenocepacia AU 1054 4095113 YP_625013.1 CDS Bcen_5166 NC_008061.1 2452032 2452694 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bur:Bcep18194_B0005 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(2452032..2452694) Burkholderia cenocepacia AU 1054 4095114 YP_625014.1 CDS Bcen_5167 NC_008061.1 2453667 2454026 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: bur:Bcep18194_B0006 arsenate reductase; arsenate reductase 2453667..2454026 Burkholderia cenocepacia AU 1054 4095115 YP_625015.1 CDS Bcen_5168 NC_008061.1 2454174 2454392 R KEGG: bur:Bcep18194_B0007 hypothetical protein; hypothetical protein complement(2454174..2454392) Burkholderia cenocepacia AU 1054 4095116 YP_625016.2 CDS Bcen_5169 NC_008061.1 2454370 2454969 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(2454370..2454969) Burkholderia cenocepacia AU 1054 4095117 YP_625017.1 CDS Bcen_5170 NC_008061.1 2455338 2455892 D PFAM: NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_B0009 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2455338..2455892 Burkholderia cenocepacia AU 1054 4095118 YP_625018.1 CDS Bcen_5171 NC_008061.1 2455967 2458216 R PFAM: response regulator receiver; KEGG: bur:Bcep18194_B0010 periplasmic sensor hybrid histidine kinase; periplasmic sensor hybrid histidine kinase complement(2455967..2458216) Burkholderia cenocepacia AU 1054 4095119 YP_625019.1 CDS Bcen_5172 NC_008061.1 2458326 2458667 R KEGG: bur:Bcep18194_B0011 hypothetical protein; hypothetical protein complement(2458326..2458667) Burkholderia cenocepacia AU 1054 4095120 YP_625020.1 CDS Bcen_5173 NC_008061.1 2458688 2459056 D PFAM: response regulator receiver; KEGG: bur:Bcep18194_B0012 response regulator receiver domain protein (CheY-like); response regulator receiver protein 2458688..2459056 Burkholderia cenocepacia AU 1054 4095121 YP_625021.1 CDS Bcen_5174 NC_008061.1 2459049 2459675 D PFAM: CheC-like protein; KEGG: bur:Bcep18194_B0013 CheC, inhibitor of MCP methylation; CheC, inhibitor of MCP methylation 2459049..2459675 Burkholderia cenocepacia AU 1054 4095122 YP_625022.1 CDS Bcen_5175 NC_008061.1 2459672 2460613 D KEGG: bur:Bcep18194_B0014 diguanylate cyclase (GGDEF domain) TIGRFAM: GGDEF domain; PFAM: GGDEF; SMART: PAS; PAS/PAC sensor-containing diguanylate cyclase 2459672..2460613 Burkholderia cenocepacia AU 1054 4095123 YP_625023.1 CDS Bcen_5176 NC_008061.1 2460629 2461564 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B0015 esterase; alpha/beta hydrolase complement(2460629..2461564) Burkholderia cenocepacia AU 1054 4095203 YP_625024.1 CDS Bcen_5177 NC_008061.1 2461703 2462035 D KEGG: bur:Bcep18194_B0016 hypothetical protein; hypothetical protein 2461703..2462035 Burkholderia cenocepacia AU 1054 4095204 YP_625025.1 CDS Bcen_5178 NC_008061.1 2462282 2463142 D PFAM: Squalene/phytoene synthase; KEGG: bur:Bcep18194_B0017 squalene/phytoene synthase; squalene/phytoene synthase 2462282..2463142 Burkholderia cenocepacia AU 1054 4095205 YP_625026.1 CDS Bcen_5179 NC_008061.1 2463156 2464409 D PFAM: amine oxidase; KEGG: bur:Bcep18194_B0018 amine oxidase; amine oxidase 2463156..2464409 Burkholderia cenocepacia AU 1054 4095206 YP_625027.1 CDS Bcen_5180 NC_008061.1 2464422 2466395 D KEGG: bur:Bcep18194_B0019 terpene synthase/squalene cyclase TIGRFAM: Terpene synthase; PFAM: Prenyltransferase/squalene oxidase; squalene cyclase 2464422..2466395 Burkholderia cenocepacia AU 1054 4095207 YP_625028.1 CDS Bcen_5181 NC_008061.1 2466399 2467106 D KEGG: bur:Bcep18194_B0020 hypothetical protein; hypothetical protein 2466399..2467106 Burkholderia cenocepacia AU 1054 4095208 YP_625029.1 CDS Bcen_5182 NC_008061.1 2467236 2468279 R PFAM: VacJ-like lipoprotein; KEGG: bur:Bcep18194_B0021 VacJ-like lipoprotein; VacJ-like lipoprotein complement(2467236..2468279) Burkholderia cenocepacia AU 1054 4095209 YP_625030.1 CDS Bcen_5183 NC_008061.1 2468272 2470905 R KEGG: bur:Bcep18194_B0022 efflux pump, RND superfamily; RND efflux transporter complement(2468272..2470905) Burkholderia cenocepacia AU 1054 4095210 YP_625031.1 CDS Bcen_5184 NC_008061.1 2471232 2471828 D PFAM: toluene tolerance; KEGG: bur:Bcep18194_B0023 toluene tolerance protein; toluene tolerance 2471232..2471828 Burkholderia cenocepacia AU 1054 4095211 YP_625032.1 CDS Bcen_5185 NC_008061.1 2471909 2472547 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B0024 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2471909..2472547) Burkholderia cenocepacia AU 1054 4095212 YP_625033.1 CDS Bcen_5186 NC_008061.1 2472692 2474212 D TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0025 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 2472692..2474212 Burkholderia cenocepacia AU 1054 4095213 YP_625034.1 CDS Bcen_5187 NC_008061.1 2474267 2474911 R PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B0026 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(2474267..2474911) Burkholderia cenocepacia AU 1054 4095214 YP_625035.1 CDS Bcen_5188 NC_008061.1 2474943 2476385 R PFAM: ATP-binding region, ATPase-like; KEGG: bur:Bcep18194_B0027 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase complement(2474943..2476385) Burkholderia cenocepacia AU 1054 4095215 YP_625036.1 CDS Bcen_5189 NC_008061.1 2476475 2478040 R TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bur:Bcep18194_B0028 diguanylate cyclase (GGDEF domain); diguanylate cyclase complement(2476475..2478040) Burkholderia cenocepacia AU 1054 4095216 YP_625037.1 CDS Bcen_5190 NC_008061.1 2478599 2480773 R catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G complement(2478599..2480773) Burkholderia cenocepacia AU 1054 4095217 YP_625038.1 CDS Bcen_5191 NC_008061.1 2480813 2481217 R PFAM: protein of unknown function DUF336; KEGG: bur:Bcep18194_B0030 protein of unknown function DUF336; hypothetical protein complement(2480813..2481217) Burkholderia cenocepacia AU 1054 4095218 YP_625039.1 CDS Bcen_5192 NC_008061.1 2481524 2483047 D PFAM: helicase-like; KEGG: bur:Bcep18194_C7264 DEAD/DEAH box helicase; DEAD/DEAH box helicase 2481524..2483047 Burkholderia cenocepacia AU 1054 4095219 YP_625040.1 CDS Bcen_5193 NC_008061.1 2483220 2483603 D KEGG: bur:Bcep18194_C7260 hypothetical protein; hypothetical protein 2483220..2483603 Burkholderia cenocepacia AU 1054 4095220 YP_625041.1 CDS Bcen_5194 NC_008061.1 2483642 2484583 R PFAM: regulatory protein, LysR; KEGG: transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2483642..2484583) Burkholderia cenocepacia AU 1054 4095221 YP_625042.1 CDS Bcen_5195 NC_008061.1 2484666 2485064 D KEGG: bps:BPSS0135 hypothetical protein; hypothetical protein 2484666..2485064 Burkholderia cenocepacia AU 1054 4095026 YP_625043.1 CDS Bcen_5196 NC_008061.1 2485424 2485762 D PFAM: small multidrug resistance protein; KEGG: bur:Bcep18194_A4036 small multidrug resistance protein; small multidrug resistance protein 2485424..2485762 Burkholderia cenocepacia AU 1054 4095027 YP_625044.1 CDS Bcen_5197 NC_008061.1 2485867 2486733 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: gka:GK1350 hypothetical protein; hypothetical protein 2485867..2486733 Burkholderia cenocepacia AU 1054 4095028 YP_625045.1 CDS Bcen_5198 NC_008061.1 2486804 2487673 D KEGG: bur:Bcep18194_B0594 2OG-Fe(II) oxygenase; hypothetical protein 2486804..2487673 Burkholderia cenocepacia AU 1054 4095029 YP_625046.1 CDS Bcen_5199 NC_008061.1 2487982 2488833 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(2487982..2488833) Burkholderia cenocepacia AU 1054 4095030 YP_625047.1 CDS Bcen_5200 NC_008061.1 2488855 2489796 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein complement(2488855..2489796) Burkholderia cenocepacia AU 1054 4095031 YP_625048.1 CDS Bcen_5201 NC_008061.1 2489851 2491113 R PFAM: extracellular solute-binding protein, family 1; KEGG: ABC transporter, substrate-binding protein; extracellular solute-binding protein complement(2489851..2491113) Burkholderia cenocepacia AU 1054 4095032 YP_625049.1 CDS Bcen_5202 NC_008061.1 2491177 2493171 R PFAM: Glycoside hydrolase, family 42-like; KEGG: tma:TM1195 beta-galactosidase; beta-galactosidase complement(2491177..2493171) Burkholderia cenocepacia AU 1054 4095033 YP_625050.1 CDS Bcen_5203 NC_008061.1 2493181 2494338 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5922 ABC sugar transporter, fused ATPase subunits; ABC transporter complement(2493181..2494338) Burkholderia cenocepacia AU 1054 4095034 YP_625051.1 CDS Bcen_5204 NC_008061.1 2494528 2495583 D PFAM: regulatory protein, LacI; KEGG: bsu:BG10847 transcriptional activator involved in the degradation of glutamine phosphoribosylpyrophosphate amidotransferase (LacI family); LacI family transcriptional regulator 2494528..2495583 Burkholderia cenocepacia AU 1054 4095035 YP_625052.1 CDS Bcen_5205 NC_008061.1 2495726 2496433 D PFAM: regulatory protein, TetR; KEGG: gox:GOX0544 transcriptional regulator TetR family; TetR family transcriptional regulator 2495726..2496433 Burkholderia cenocepacia AU 1054 4095036 YP_625053.1 CDS Bcen_5206 NC_008061.1 2496553 2498214 D PFAM: glycoside hydrolase, family 5; KEGG: pac:PPA2106 endoglycoceramidase; glycoside hydrolase family protein 2496553..2498214 Burkholderia cenocepacia AU 1054 4095037 YP_625054.1 CDS Bcen_5207 NC_008061.1 2498328 2499743 D PFAM: glycoside hydrolase, family 1; KEGG: tfu:Tfu_0937 beta-glucosidase; glycoside hydrolase family protein 2498328..2499743 Burkholderia cenocepacia AU 1054 4095038 YP_625055.1 CDS Bcen_5208 NC_008061.1 2499919 2501052 D PFAM: protein of unknown function DUF323; KEGG: reu:Reut_A2895 protein of unknown function DUF323; hypothetical protein 2499919..2501052 Burkholderia cenocepacia AU 1054 4095039 YP_625056.1 CDS Bcen_5209 NC_008061.1 2501086 2502897 D PFAM: sulfatase; KEGG: cps:CPS_2367 sulfatase family protein; sulfatase 2501086..2502897 Burkholderia cenocepacia AU 1054 4095040 YP_625057.1 CDS Bcen_5210 NC_008061.1 2503040 2503978 D KEGG: bur:Bcep18194_B3027 outer membrane protein (porin); outer membrane protein (porin) 2503040..2503978 Burkholderia cenocepacia AU 1054 4095041 YP_625058.1 CDS Bcen_5211 NC_008061.1 2504192 2504563 D PFAM: transport-associated; KEGG: bur:Bcep18194_B3026 transport-associated protein; transport-associated 2504192..2504563 Burkholderia cenocepacia AU 1054 4095042 YP_625059.1 CDS Bcen_5212 NC_008061.1 2504618 2505277 R PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B0037 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2504618..2505277) Burkholderia cenocepacia AU 1054 4095043 YP_625060.1 CDS Bcen_5213 NC_008061.1 2505391 2505867 D PFAM: OsmC-like protein; KEGG: bur:Bcep18194_B0038 OsmC-like protein; OsmC-like protein 2505391..2505867 Burkholderia cenocepacia AU 1054 4095044 YP_625061.1 CDS Bcen_5214 NC_008061.1 2505886 2506836 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0040 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2505886..2506836) Burkholderia cenocepacia AU 1054 4095045 YP_625062.1 CDS Bcen_5215 NC_008061.1 2506951 2508702 D catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 2506951..2508702 Burkholderia cenocepacia AU 1054 4094773 YP_625063.1 CDS Bcen_5216 NC_008061.1 2508819 2509748 D PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_B0042 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2508819..2509748 Burkholderia cenocepacia AU 1054 4094774 YP_625064.1 CDS Bcen_5217 NC_008061.1 2509774 2510703 D PFAM: oxidoreductase-like; KEGG: bur:Bcep18194_B0043 D-galactose 1-dehydrogenase; D-galactose 1-dehydrogenase 2509774..2510703 Burkholderia cenocepacia AU 1054 4094775 YP_625065.1 CDS Bcen_5218 NC_008061.1 2510797 2511810 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_B0044 ABC sugar transporter, periplasmic ligand binding protein; periplasmic binding protein/LacI transcriptional regulator 2510797..2511810 Burkholderia cenocepacia AU 1054 4094776 YP_625066.1 CDS araG NC_008061.1 2511832 2513379 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 2511832..2513379 Burkholderia cenocepacia AU 1054 4094777 YP_625067.1 CDS araH NC_008061.1 2513416 2514441 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 2513416..2514441 Burkholderia cenocepacia AU 1054 4094778 YP_625068.1 CDS Bcen_5221 NC_008061.1 2514498 2515400 D PFAM: Senescence marker protein-30 (SMP-30)-like; KEGG: bur:Bcep18194_B0048 senescence marker protein-30 (SMP-30); SMP-30/gluconolaconase/LRE-like region 2514498..2515400 Burkholderia cenocepacia AU 1054 4094779 YP_625069.1 CDS Bcen_5222 NC_008061.1 2515583 2516086 D PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_B0049 transcriptional regulator, MarR family; MarR family transcriptional regulator 2515583..2516086 Burkholderia cenocepacia AU 1054 4094780 YP_625070.1 CDS Bcen_5223 NC_008061.1 2516322 2517152 D catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA; p-hydroxycinnamoyl CoA hydratase/lyase 2516322..2517152 Burkholderia cenocepacia AU 1054 4094781 YP_625071.1 CDS Bcen_5224 NC_008061.1 2517224 2518672 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B0051 aldehyde dehydrogenase; aldehyde dehydrogenase 2517224..2518672 Burkholderia cenocepacia AU 1054 4094782 YP_625072.1 CDS Bcen_5225 NC_008061.1 2518669 2520570 D catalyzes the conversion of ferulic acid to feruloyl-CoA; feruloyl-CoA synthase 2518669..2520570 Burkholderia cenocepacia AU 1054 4094783 YP_625073.1 CDS Bcen_5226 NC_008061.1 2520786 2521991 D PFAM: General substrate transporter; KEGG: bur:Bcep18194_B0053 major facilitator superfamily (MFS_1) transporter; 3-hydroxyphenylpropionic transporter MhpT 2520786..2521991 Burkholderia cenocepacia AU 1054 4094784 YP_625074.1 CDS Bcen_5227 NC_008061.1 2522057 2523205 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B0054 outer membrane protein (porin); porin 2522057..2523205 Burkholderia cenocepacia AU 1054 4094785 YP_625075.1 CDS Bcen_5228 NC_008061.1 2523239 2524963 D PFAM: Tannase and feruloyl esterase; KEGG: bur:Bcep18194_B0055 feruloyl esterase; feruloyl esterase 2523239..2524963 Burkholderia cenocepacia AU 1054 4094786 YP_625076.1 CDS Bcen_5229 NC_008061.1 2525027 2525503 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_B0056 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2525027..2525503) Burkholderia cenocepacia AU 1054 4094787 YP_625077.1 CDS Bcen_5230 NC_008061.1 2525693 2526925 D catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase 2525693..2526925 Burkholderia cenocepacia AU 1054 4094788 YP_625078.1 CDS Bcen_5231 NC_008061.1 2526967 2528151 D KEGG: bur:Bcep18194_B0058 peptidase M20D, amidohydrolase TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase M20D, amidohydrolase 2526967..2528151 Burkholderia cenocepacia AU 1054 4094789 YP_625079.1 CDS Bcen_5232 NC_008061.1 2528569 2528808 R hypothetical protein complement(2528569..2528808) Burkholderia cenocepacia AU 1054 4094790 YP_625080.1 CDS Bcen_5233 NC_008061.1 2528856 2529434 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0061 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2528856..2529434) Burkholderia cenocepacia AU 1054 4094791 YP_625081.1 CDS Bcen_5234 NC_008061.1 2529661 2530308 R PFAM: 17 kDa surface antigen; KEGG: bur:Bcep18194_B0066 outer membrane lipoprotein; 17 kDa surface antigen complement(2529661..2530308) Burkholderia cenocepacia AU 1054 4095183 YP_625082.1 CDS Bcen_5235 NC_008061.1 2530771 2531970 D Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 2530771..2531970 Burkholderia cenocepacia AU 1054 4095184 YP_625083.1 CDS Bcen_5236 NC_008061.1 2532038 2533222 D Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 2532038..2533222 Burkholderia cenocepacia AU 1054 4095185 YP_625084.1 CDS Bcen_5237 NC_008061.1 2533278 2533751 D PFAM: protein of unknown function DUF1486; KEGG: bur:Bcep18194_B0069 hypothetical protein; hypothetical protein 2533278..2533751 Burkholderia cenocepacia AU 1054 4095186 YP_625085.1 CDS Bcen_5238 NC_008061.1 2533824 2534687 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0070 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2533824..2534687) Burkholderia cenocepacia AU 1054 4095187 YP_625086.1 CDS Bcen_5239 NC_008061.1 2535030 2535719 R KEGG: chy:CHY_0899 hypothetical protein; hypothetical protein complement(2535030..2535719) Burkholderia cenocepacia AU 1054 4095188 YP_625087.1 CDS Bcen_5240 NC_008061.1 2535716 2536195 R PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_B0072 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(2535716..2536195) Burkholderia cenocepacia AU 1054 4095189 YP_625088.1 CDS Bcen_5241 NC_008061.1 2536659 2537462 D PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_B0073 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein 2536659..2537462 Burkholderia cenocepacia AU 1054 4095190 YP_625089.1 CDS Bcen_5242 NC_008061.1 2537494 2538342 D PFAM: Phytanoyl-CoA dioxygenase; KEGG: bur:Bcep18194_B0074 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 2537494..2538342 Burkholderia cenocepacia AU 1054 4095191 YP_625090.1 CDS Bcen_5243 NC_008061.1 2538419 2539156 R TIGRFAM: Histidine utilization repressor; PFAM: regulatory protein GntR, HTH; KEGG: bur:Bcep18194_B0075 transcriptional regulator, histidine utilization repressor, GntR family; histidine utilization repressor complement(2538419..2539156) Burkholderia cenocepacia AU 1054 4095192 YP_625091.1 CDS Bcen_5244 NC_008061.1 2539198 2539740 R PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_B0076 transcriptional regulator, XRE family with cupin sensor domain; XRE family transcriptional regulator complement(2539198..2539740) Burkholderia cenocepacia AU 1054 4095193 YP_625092.1 CDS Bcen_5245 NC_008061.1 2539875 2540657 D PFAM: class II aldolase/adducin-like; KEGG: bur:Bcep18194_B0077 class II aldolase/adducin-like; class II aldolase/adducin domain-containing protein 2539875..2540657 Burkholderia cenocepacia AU 1054 4095194 YP_625093.1 CDS Bcen_5246 NC_008061.1 2540708 2541604 D PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_B0078 dihydrodipicolinate synthase; dihydrodipicolinate synthase 2540708..2541604 Burkholderia cenocepacia AU 1054 4095195 YP_625094.1 CDS Bcen_5247 NC_008061.1 2541601 2542305 D PFAM: MOSC; KEGG: bur:Bcep18194_B0079 MOSC family protein; MOSC domain-containing protein 2541601..2542305 Burkholderia cenocepacia AU 1054 4095196 YP_625095.1 CDS Bcen_5248 NC_008061.1 2542323 2543084 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B0080 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase complement(2542323..2543084) Burkholderia cenocepacia AU 1054 4095197 YP_625096.1 CDS Bcen_5249 NC_008061.1 2543285 2544211 D PFAM: protein of unknown function DUF480; KEGG: bur:Bcep18194_B0081 protein of unknown function DUF480; hypothetical protein 2543285..2544211 Burkholderia cenocepacia AU 1054 4095198 YP_625097.1 CDS Bcen_5250 NC_008061.1 2544359 2545120 R KEGG: bur:Bcep18194_B0084 hypothetical protein; hypothetical protein complement(2544359..2545120) Burkholderia cenocepacia AU 1054 4095199 YP_625098.1 CDS Bcen_5251 NC_008061.1 2545317 2546639 D PFAM: secretory lipase; KEGG: bur:Bcep18194_B0085 triacylglycerol lipase; triacylglycerol lipase 2545317..2546639 Burkholderia cenocepacia AU 1054 4095200 YP_625099.1 CDS Bcen_5252 NC_008061.1 2546833 2547963 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 2546833..2547963 Burkholderia cenocepacia AU 1054 4095201 YP_625100.1 CDS Bcen_5253 NC_008061.1 2548359 2548787 D PFAM: PRC-barrel; KEGG: bur:Bcep18194_B0088 hypothetical protein; PRC-barrel 2548359..2548787 Burkholderia cenocepacia AU 1054 4095202 YP_625101.1 CDS Bcen_5254 NC_008061.1 2548849 2549364 R PFAM: OsmC-like protein; KEGG: bur:Bcep18194_B0089 OsmC-like protein; OsmC-like protein complement(2548849..2549364) Burkholderia cenocepacia AU 1054 4094929 YP_625102.1 CDS Bcen_5255 NC_008061.1 2549388 2550143 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B0090 NAD-dependent epimerase/dehydratase; NmrA-like complement(2549388..2550143) Burkholderia cenocepacia AU 1054 4094930 YP_625103.1 CDS Bcen_5256 NC_008061.1 2550349 2551428 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0091 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2550349..2551428) Burkholderia cenocepacia AU 1054 4094931 YP_625104.1 CDS Bcen_5257 NC_008061.1 2551463 2551858 R PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_B0092 hypothetical protein; cupin 2, barrel complement(2551463..2551858) Burkholderia cenocepacia AU 1054 4094932 YP_625105.1 CDS Bcen_5258 NC_008061.1 2551931 2552410 R TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B0093 alkylhydroperoxidase AhpD core; alkylhydroperoxidase AhpD core complement(2551931..2552410) Burkholderia cenocepacia AU 1054 4094933 YP_625106.1 CDS Bcen_5259 NC_008061.1 2552604 2553491 R PFAM: sigma-70 region 2; KEGG: bur:Bcep18194_B0094 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor complement(2552604..2553491) Burkholderia cenocepacia AU 1054 4094934 YP_625107.1 CDS Bcen_5260 NC_008061.1 2553488 2554297 R PFAM: diaminopimelate epimerase; KEGG: bur:Bcep18194_B0095 diaminopimelate epimerase; diaminopimelate epimerase complement(2553488..2554297) Burkholderia cenocepacia AU 1054 4094935 YP_625108.1 CDS Bcen_5261 NC_008061.1 2554606 2556633 D KEGG: bca:BCEA0178 hypothetical protein; hypothetical protein 2554606..2556633 Burkholderia cenocepacia AU 1054 4094936 YP_625109.1 CDS Bcen_5262 NC_008061.1 2556633 2557613 D KEGG: bca:BCEA0177 hypothetical protein; hypothetical protein 2556633..2557613 Burkholderia cenocepacia AU 1054 4094937 YP_625110.1 CDS Bcen_5263 NC_008061.1 2557615 2559036 D hypothetical protein 2557615..2559036 Burkholderia cenocepacia AU 1054 4094938 YP_625111.1 CDS Bcen_5264 NC_008061.1 2559097 2559432 R PFAM: transposase IS116/IS110/IS902; KEGG: bte:BTH_II1545 ISBma3, transposase; transposase IS116/IS110/IS902 complement(2559097..2559432) Burkholderia cenocepacia AU 1054 4094939 YP_625112.1 CDS Bcen_5265 NC_008061.1 2560269 2561141 R PFAM: band 7 protein; KEGG: pto:PTO0385 band 7 integral membrane protein-like protein; band 7 protein complement(2560269..2561141) Burkholderia cenocepacia AU 1054 4094940 YP_625113.1 CDS Bcen_5266 NC_008061.1 2561469 2561921 D KEGG: bpa:BPP2077 hypothetical protein; hypothetical protein 2561469..2561921 Burkholderia cenocepacia AU 1054 4094941 YP_625114.1 CDS Bcen_5267 NC_008061.1 2562005 2570611 D PFAM: carbohydrate binding; KEGG: rsp:RSP_3613 glycosyltransferase; glycosyltransferase 2562005..2570611 Burkholderia cenocepacia AU 1054 4094942 YP_625115.1 CDS Bcen_5268 NC_008061.1 2570684 2570992 D PFAM: 17 kDa surface antigen; KEGG: dar:Daro_2087 osmotically inducible lipoprotein; 17 kDa surface antigen 2570684..2570992 Burkholderia cenocepacia AU 1054 4094943 YP_625116.1 CDS Bcen_5269 NC_008061.1 2571116 2572138 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: son:SO2551 transcriptional regulator-related protein; Crp/FNR family transcriptional regulator complement(2571116..2572138) Burkholderia cenocepacia AU 1054 4094944 YP_625117.1 CDS Bcen_5270 NC_008061.1 2572285 2572704 R hypothetical protein complement(2572285..2572704) Burkholderia cenocepacia AU 1054 4094945 YP_625118.1 CDS Bcen_5271 NC_008061.1 2573127 2573534 D hypothetical protein 2573127..2573534 Burkholderia cenocepacia AU 1054 4094946 YP_625119.1 CDS Bcen_5272 NC_008061.1 2573821 2574180 D PFAM: transposase, IS204/IS1001/IS1096/IS1165; KEGG: bte:BTH_II1656 ISBma1, transposase; transposase, IS204/IS1001/IS1096/IS1165 2573821..2574180 Burkholderia cenocepacia AU 1054 4094947 YP_625120.1 CDS Bcen_5273 NC_008061.1 2574299 2574556 R hypothetical protein complement(2574299..2574556) Burkholderia cenocepacia AU 1054 4094792 YP_625121.1 CDS Bcen_5274 NC_008061.1 2574643 2575362 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: nmu:Nmul_A1182 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator complement(2574643..2575362) Burkholderia cenocepacia AU 1054 4094793 YP_625122.1 CDS Bcen_5275 NC_008061.1 2575781 2576005 D PFAM: 17 kDa surface antigen; KEGG: dar:Daro_2087 osmotically inducible lipoprotein; 17 kDa surface antigen 2575781..2576005 Burkholderia cenocepacia AU 1054 4094794 YP_625123.1 CDS Bcen_5276 NC_008061.1 2576097 2577278 D PFAM: fatty acid desaturase; KEGG: bpm:BURPS1710b_1130 fatty acid desaturase family protein; fatty acid desaturase 2576097..2577278 Burkholderia cenocepacia AU 1054 4094795 YP_625124.1 CDS Bcen_5277 NC_008061.1 2577590 2577925 R hypothetical protein complement(2577590..2577925) Burkholderia cenocepacia AU 1054 4094796 YP_625125.1 CDS Bcen_5278 NC_008061.1 2577948 2578319 D hypothetical protein 2577948..2578319 Burkholderia cenocepacia AU 1054 4094797 YP_625126.1 CDS Bcen_5279 NC_008061.1 2578378 2578725 D hypothetical protein 2578378..2578725 Burkholderia cenocepacia AU 1054 4094798 YP_625127.1 CDS Bcen_5280 NC_008061.1 2578847 2579050 R PFAM: CsbD-like; KEGG: dar:Daro_2060 CsbD-like; CsbD-like protein complement(2578847..2579050) Burkholderia cenocepacia AU 1054 4094799 YP_625128.1 CDS Bcen_5281 NC_008061.1 2579606 2579752 D KEGG: reu:Reut_A1643 hypothetical protein; hypothetical protein 2579606..2579752 Burkholderia cenocepacia AU 1054 4094800 YP_625129.1 CDS Bcen_5282 NC_008061.1 2580177 2580335 D KEGG: dar:Daro_2051 conserved hypothetical transmembrane protein; hypothetical protein 2580177..2580335 Burkholderia cenocepacia AU 1054 4094801 YP_625130.1 CDS Bcen_5283 NC_008061.1 2580463 2581704 R PFAM: sodium/hydrogen exchanger; KEGG: Na+/H+ antiporter-like protein; sodium/hydrogen exchanger complement(2580463..2581704) Burkholderia cenocepacia AU 1054 4094802 YP_625131.1 CDS Bcen_5284 NC_008061.1 2582518 2584593 R TIGRFAM: transketolase; PFAM: Transketolase-like; KEGG: gvi:glr2297 transketolase; transketolase complement(2582518..2584593) Burkholderia cenocepacia AU 1054 4094803 YP_625132.1 CDS Bcen_5285 NC_008061.1 2584669 2585448 R KEGG: noc:Noc_1131 hypothetical protein; hypothetical protein complement(2584669..2585448) Burkholderia cenocepacia AU 1054 4094804 YP_625133.1 CDS Bcen_5286 NC_008061.1 2585772 2586086 R hypothetical protein complement(2585772..2586086) Burkholderia cenocepacia AU 1054 4094805 YP_625134.1 CDS Bcen_5287 NC_008061.1 2586225 2586602 R KEGG: bpm:BURPS1710b_2279 hypothetical protein; hypothetical protein complement(2586225..2586602) Burkholderia cenocepacia AU 1054 4094806 YP_625135.1 CDS Bcen_5288 NC_008061.1 2586943 2587125 D KEGG: bur:Bcep18194_B1636 hypothetical protein; hypothetical protein 2586943..2587125 Burkholderia cenocepacia AU 1054 4094807 YP_625136.1 CDS Bcen_5289 NC_008061.1 2587370 2587798 D PFAM: PRC-barrel; KEGG: PRC-barrel domain protein; PRC-barrel protein 2587370..2587798 Burkholderia cenocepacia AU 1054 4094808 YP_625137.1 CDS Bcen_5290 NC_008061.1 2587898 2588617 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: nmu:Nmul_A1182 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator complement(2587898..2588617) Burkholderia cenocepacia AU 1054 4094809 YP_625138.1 CDS Bcen_5291 NC_008061.1 2589264 2590961 D PFAM: phage integrase; KEGG: bma:BMAA1051 phage integrase family protein; phage integrase 2589264..2590961 Burkholderia cenocepacia AU 1054 4094810 YP_625139.1 CDS Bcen_5292 NC_008061.1 2591003 2591602 D KEGG: bte:BTH_I1932 hypothetical protein; hypothetical protein 2591003..2591602 Burkholderia cenocepacia AU 1054 4094811 YP_625140.1 CDS Bcen_5293 NC_008061.1 2591674 2591919 R PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_A6198 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(2591674..2591919) Burkholderia cenocepacia AU 1054 4094579 YP_625141.1 CDS Bcen_5294 NC_008061.1 2592060 2592746 D KEGG: bur:Bcep18194_A6199 hypothetical protein; hypothetical protein 2592060..2592746 Burkholderia cenocepacia AU 1054 4094580 YP_625142.1 CDS Bcen_5295 NC_008061.1 2592762 2593001 D KEGG: bur:Bcep18194_C6603 hypothetical protein; hypothetical protein 2592762..2593001 Burkholderia cenocepacia AU 1054 4094581 YP_625143.1 CDS Bcen_5296 NC_008061.1 2593389 2593676 D KEGG: bur:Bcep18194_C6546 hypothetical protein; hypothetical protein 2593389..2593676 Burkholderia cenocepacia AU 1054 4094582 YP_625144.1 CDS Bcen_5297 NC_008061.1 2593998 2595257 R PFAM: transposase, mutator type; KEGG: bte:BTH_II0431 transposase, mutator family; transposase, mutator type complement(2593998..2595257) Burkholderia cenocepacia AU 1054 4094583 YP_625145.1 CDS Bcen_5298 NC_008061.1 2595548 2597626 D PFAM: carbon starvation protein CstA; KEGG: bur:Bcep18194_B0097 carbon starvation protein CstA; carbon starvation protein CstA 2595548..2597626 Burkholderia cenocepacia AU 1054 4094584 YP_625146.1 CDS Bcen_5299 NC_008061.1 2597639 2597845 D PFAM: protein of unknown function DUF466; KEGG: bur:Bcep18194_B0098 protein of unknown function DUF466; hypothetical protein 2597639..2597845 Burkholderia cenocepacia AU 1054 4094585 YP_625147.1 CDS Bcen_5300 NC_008061.1 2598053 2598673 D TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III related proteins; KEGG: bur:Bcep18194_B0099 hemolysin HylII family protein; hemolysin III family channel protein 2598053..2598673 Burkholderia cenocepacia AU 1054 4094586 YP_625148.1 CDS Bcen_5301 NC_008061.1 2598737 2600143 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0100 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2598737..2600143) Burkholderia cenocepacia AU 1054 4094587 YP_625149.1 CDS Bcen_5302 NC_008061.1 2600140 2600580 R KEGG: bur:Bcep18194_B0101 hypothetical protein; hypothetical protein complement(2600140..2600580) Burkholderia cenocepacia AU 1054 4094588 YP_625150.1 CDS Bcen_5303 NC_008061.1 2600699 2601052 R KEGG: bur:Bcep18194_B0102 aromatic ring-cleaving dioxygenase-like; aromatic ring-cleaving dioxygenase-like protein complement(2600699..2601052) Burkholderia cenocepacia AU 1054 4094589 YP_625151.1 CDS Bcen_5304 NC_008061.1 2601541 2601918 D KEGG: bur:Bcep18194_B0103 hypothetical protein; hypothetical protein 2601541..2601918 Burkholderia cenocepacia AU 1054 4094590 YP_625152.1 CDS Bcen_5305 NC_008061.1 2602142 2602621 D KEGG: bur:Bcep18194_B0104 hypothetical protein; hypothetical protein 2602142..2602621 Burkholderia cenocepacia AU 1054 4094591 YP_625153.1 CDS Bcen_5306 NC_008061.1 2602787 2603047 D hypothetical protein 2602787..2603047 Burkholderia cenocepacia AU 1054 4094592 YP_625154.1 CDS Bcen_5307 NC_008061.1 2603205 2604365 R PFAM: Radical SAM; KEGG: bur:Bcep18194_B0105 radical SAM oxidoreductases; radical SAM family protein complement(2603205..2604365) Burkholderia cenocepacia AU 1054 4094593 YP_625155.1 CDS ispH NC_008061.1 2604378 2605319 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2604378..2605319) Burkholderia cenocepacia AU 1054 4094594 YP_625156.1 CDS Bcen_5309 NC_008061.1 2605722 2606909 D PFAM: glycosyl transferase, family 2; KEGG: bur:Bcep18194_B0107 glycosyl transferase, family 2; glycosyl transferase family protein 2605722..2606909 Burkholderia cenocepacia AU 1054 4094595 YP_625157.1 CDS Bcen_5310 NC_008061.1 2607025 2608428 R KEGG: bur:Bcep18194_B0108 hypothetical protein; hypothetical protein complement(2607025..2608428) Burkholderia cenocepacia AU 1054 4094596 YP_625158.1 CDS Bcen_5311 NC_008061.1 2608537 2609544 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B0109 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2608537..2609544) Burkholderia cenocepacia AU 1054 4094597 YP_625159.1 CDS Bcen_5312 NC_008061.1 2609676 2609993 D catalyzes the hydrolysis of acylphosphate; acylphosphatase 2609676..2609993 Burkholderia cenocepacia AU 1054 4094389 YP_625160.1 CDS Bcen_5313 NC_008061.1 2610012 2610911 D TIGRFAM: rarD protein; KEGG: bur:Bcep18194_B0111 RarD protein; rarD protein 2610012..2610911 Burkholderia cenocepacia AU 1054 4094390 YP_625161.1 CDS Bcen_5314 NC_008061.1 2611340 2612464 D KEGG: bur:Bcep18194_B0112 hypothetical protein; hypothetical protein 2611340..2612464 Burkholderia cenocepacia AU 1054 4094391 YP_625162.1 CDS Bcen_5315 NC_008061.1 2612508 2612819 R KEGG: bte:BTH_II2222 hypothetical protein; hypothetical protein complement(2612508..2612819) Burkholderia cenocepacia AU 1054 4094392 YP_625163.1 CDS Bcen_5316 NC_008061.1 2612835 2614355 R TIGRFAM: Amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; KEGG: bur:Bcep18194_B0113 amino acid/peptide transporter; amino acid/peptide transporter complement(2612835..2614355) Burkholderia cenocepacia AU 1054 4094393 YP_625164.1 CDS Bcen_5317 NC_008061.1 2614853 2615431 D PFAM: helix-turn-helix motif; KEGG: bur:Bcep18194_B0114 transcriptional regulator, XRE family with cupin sensor domain; XRE family transcriptional regulator 2614853..2615431 Burkholderia cenocepacia AU 1054 4094394 YP_625165.1 CDS Bcen_5318 NC_008061.1 2615611 2617224 D PFAM: extracellular solute-binding protein, family 5; KEGG: bur:Bcep18194_B0115 ABC dipeptide/oligopeptide/nickel family transporter, periplasmic ligand binding protein; extracellular solute-binding protein 2615611..2617224 Burkholderia cenocepacia AU 1054 4094395 YP_625166.1 CDS Bcen_5319 NC_008061.1 2617236 2618174 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0116 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2617236..2618174 Burkholderia cenocepacia AU 1054 4094396 YP_625167.1 CDS Bcen_5320 NC_008061.1 2618188 2619090 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B0117 ABC dipeptide/oligopeptide/nickel family transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2618188..2619090 Burkholderia cenocepacia AU 1054 4094397 YP_625168.1 CDS Bcen_5321 NC_008061.1 2619092 2620084 D KEGG: bur:Bcep18194_B0118 oligopeptide/dipeptide ABC transporter, ATPase subunit TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; PFAM: ABC transporter related; SMART: ATPase; oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein 2619092..2620084 Burkholderia cenocepacia AU 1054 4094398 YP_625169.1 CDS Bcen_5322 NC_008061.1 2620081 2621100 D KEGG: bur:Bcep18194_B0119 oligopeptide/dipeptide ABC transporter, ATPase subunit TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; PFAM: ABC transporter related; SMART: ATPase; oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein 2620081..2621100 Burkholderia cenocepacia AU 1054 4094399 YP_625170.1 CDS Bcen_5323 NC_008061.1 2621305 2622741 D PFAM: outer membrane porin; KEGG: bur:Bcep18194_B0120 outer membrane porin; outer membrane porin 2621305..2622741 Burkholderia cenocepacia AU 1054 4094400 YP_625171.1 CDS Bcen_5324 NC_008061.1 2622796 2623788 R SMART: Rhodanese-like; KEGG: bur:Bcep18194_B0121 DedA family protein; rhodanese-like protein complement(2622796..2623788) Burkholderia cenocepacia AU 1054 4094401 YP_625172.1 CDS Bcen_5325 NC_008061.1 2623943 2624212 R KEGG: bur:Bcep18194_B0122 hypothetical protein; hypothetical protein complement(2623943..2624212) Burkholderia cenocepacia AU 1054 4094402 YP_625173.1 CDS Bcen_5326 NC_008061.1 2624483 2626816 R KEGG: bur:Bcep18194_B0123 phospholipase C TIGRFAM: Twin-arginine translocation pathway signal; PFAM: phosphoesterase; protein of unknown function DUF756; twin-arginine translocation pathway signal complement(2624483..2626816) Burkholderia cenocepacia AU 1054 4094403 YP_625174.1 CDS Bcen_5327 NC_008061.1 2626824 2627132 D hypothetical protein 2626824..2627132 Burkholderia cenocepacia AU 1054 4094404 YP_625175.1 CDS Bcen_5328 NC_008061.1 2627409 2627909 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0124 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2627409..2627909 Burkholderia cenocepacia AU 1054 4094405 YP_625176.1 CDS Bcen_5329 NC_008061.1 2628065 2629765 D PFAM: Thioredoxin domain; KEGG: bur:Bcep18194_B0125 hypothetical protein; thioredoxin domain-containing protein 2628065..2629765 Burkholderia cenocepacia AU 1054 4094406 YP_625177.1 CDS Bcen_5330 NC_008061.1 2629674 2630339 R KEGG: hypothetical protein; hypothetical protein complement(2629674..2630339) Burkholderia cenocepacia AU 1054 4094407 YP_625178.1 CDS Bcen_5331 NC_008061.1 2630402 2631805 R PFAM: Citrate transporter; KEGG: bur:Bcep18194_B0128 H+/gluconate symporter family protein; citrate transporter complement(2630402..2631805) Burkholderia cenocepacia AU 1054 4094408 YP_625179.1 CDS Bcen_5332 NC_008061.1 2632132 2633619 D PFAM: sigma-54 factor, interaction region; SMART: ATPase; KEGG: bur:Bcep18194_B0129 sigma54 specific transcriptional regulator with PAS sensor, fis family; sigma-54 dependent trancsriptional regulator 2632132..2633619 Burkholderia cenocepacia AU 1054 4095280 YP_625180.1 CDS Bcen_5333 NC_008061.1 2633674 2634210 D KEGG: bur:Bcep18194_B0130 hypothetical protein; hypothetical protein 2633674..2634210 Burkholderia cenocepacia AU 1054 4095281 YP_625181.1 CDS Bcen_5334 NC_008061.1 2634272 2634544 D KEGG: bur:Bcep18194_B0131 hypothetical protein; hypothetical protein 2634272..2634544 Burkholderia cenocepacia AU 1054 4095282 YP_625182.1 CDS Bcen_5335 NC_008061.1 2634648 2634953 D PFAM: histone-like nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_B0132 histone-like nucleoid-structuring protein H-NS; histone-like nucleoid-structuring protein H-NS 2634648..2634953 Burkholderia cenocepacia AU 1054 4095283 YP_625183.1 CDS Bcen_5336 NC_008061.1 2635533 2637890 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0134 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2635533..2637890 Burkholderia cenocepacia AU 1054 4095284 YP_625184.1 CDS Bcen_5337 NC_008061.1 2638555 2639106 R KEGG: bur:Bcep18194_B0135 hypothetical protein; hypothetical protein complement(2638555..2639106) Burkholderia cenocepacia AU 1054 4095285 YP_625185.1 CDS Bcen_5338 NC_008061.1 2639281 2640054 R PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_B0136 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(2639281..2640054) Burkholderia cenocepacia AU 1054 4095286 YP_625186.1 CDS Bcen_5339 NC_008061.1 2640326 2640655 R hypothetical protein complement(2640326..2640655) Burkholderia cenocepacia AU 1054 4095287 YP_625187.1 CDS Bcen_5340 NC_008061.1 2640763 2641611 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B0137 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2640763..2641611 Burkholderia cenocepacia AU 1054 4095288 YP_625188.1 CDS Bcen_5341 NC_008061.1 2641801 2642184 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_B0138 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2641801..2642184) Burkholderia cenocepacia AU 1054 4095289 YP_625189.1 CDS Bcen_5342 NC_008061.1 2642439 2643098 D PFAM: protein of unknown function DUF1470; KEGG: bur:Bcep18194_B0139 protein of unknown function DUF1470; hypothetical protein 2642439..2643098 Burkholderia cenocepacia AU 1054 4095290 YP_625190.1 CDS Bcen_5343 NC_008061.1 2643121 2645109 R KEGG: bur:Bcep18194_B0140 sigma54 specific transcriptional regulator with PAS sensor, fis family TIGRFAM: Propionate catabolism, transcriptional regulator PrpR; PFAM: sigma-54 factor, interaction region; SMART: PAS; ATPase; sigma-54 dependent trancsriptional regulator complement(2643121..2645109) Burkholderia cenocepacia AU 1054 4095291 YP_625191.1 CDS prpB NC_008061.1 2645280 2646173 D catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 2645280..2646173 Burkholderia cenocepacia AU 1054 4095292 YP_625192.1 CDS Bcen_5345 NC_008061.1 2646214 2647386 D catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 2646214..2647386 Burkholderia cenocepacia AU 1054 4095293 YP_625193.1 CDS Bcen_5346 NC_008061.1 2647468 2650062 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2647468..2650062 Burkholderia cenocepacia AU 1054 4095294 YP_625194.1 CDS Bcen_5347 NC_008061.1 2650089 2651279 D TIGRFAM: PrpF, AcnD-accessory; PFAM: protein of unknown function DUF453; KEGG: bur:Bcep18194_B0144 protein of unknown function DUF453; PrpF, AcnD-accessory 2650089..2651279 Burkholderia cenocepacia AU 1054 4095295 YP_625195.1 CDS Bcen_5348 NC_008061.1 2651338 2652276 R PFAM: Alpha/beta hydrolase fold-3; KEGG: bur:Bcep18194_B0145 esterase/lipase/thioesterase; Alpha/beta hydrolase fold-3 complement(2651338..2652276) Burkholderia cenocepacia AU 1054 4095296 YP_625196.1 CDS Bcen_5350 NC_008061.1 2653505 2654824 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0147 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2653505..2654824) Burkholderia cenocepacia AU 1054 4095298 YP_625197.1 CDS Bcen_5351 NC_008061.1 2654835 2655887 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B0148 outer membrane protein (porin); porin complement(2654835..2655887) Burkholderia cenocepacia AU 1054 4095947 YP_625198.1 CDS Bcen_5352 NC_008061.1 2655969 2656766 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bur:Bcep18194_B0149 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(2655969..2656766) Burkholderia cenocepacia AU 1054 4095948 YP_625199.1 CDS Bcen_5353 NC_008061.1 2656763 2657983 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_B0150 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2656763..2657983) Burkholderia cenocepacia AU 1054 4095949 YP_625200.1 CDS Bcen_5354 NC_008061.1 2658064 2658846 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(2658064..2658846) Burkholderia cenocepacia AU 1054 4095950 YP_625201.1 CDS Bcen_5355 NC_008061.1 2658981 2659745 D PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_B0152 transcriptional regulator, IclR family; IclR family transcriptional regulator 2658981..2659745 Burkholderia cenocepacia AU 1054 4095951 YP_625202.1 CDS Bcen_5356 NC_008061.1 2659869 2660921 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_B0153 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 2659869..2660921 Burkholderia cenocepacia AU 1054 4095952 YP_625203.1 CDS Bcen_5357 NC_008061.1 2661193 2661285 D hypothetical protein 2661193..2661285 Burkholderia cenocepacia AU 1054 4095953 YP_625204.1 CDS Bcen_5358 NC_008061.1 2661333 2661551 D PFAM: plasmid stabilization system; KEGG: bur:Bcep18194_B0155 plasmid stabilization system; plasmid stabilization system protein 2661333..2661551 Burkholderia cenocepacia AU 1054 4095954 YP_625205.1 CDS Bcen_5359 NC_008061.1 2661594 2662037 R TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily; KEGG: bur:Bcep18194_B0156 phenylacetic acid degradation-related protein; phenylacetic acid degradation-related protein complement(2661594..2662037) Burkholderia cenocepacia AU 1054 4095955 YP_625206.1 CDS Bcen_5360 NC_008061.1 2662315 2663934 D PFAM: ligand binding Tar; KEGG: bur:Bcep18194_B0157 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2662315..2663934 Burkholderia cenocepacia AU 1054 4095956 YP_625207.1 CDS Bcen_5361 NC_008061.1 2663907 2665094 R PFAM: N-acylglucosamine 2-epimerase; KEGG: bur:Bcep18194_B0158 N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase complement(2663907..2665094) Burkholderia cenocepacia AU 1054 4095957 YP_625208.1 CDS Bcen_5362 NC_008061.1 2665132 2665830 D PFAM: MgtC/SapB transporter; KEGG: bte:BTH_II2176 MgtC family protein; MgtC/SapB transporter 2665132..2665830 Burkholderia cenocepacia AU 1054 4095958 YP_625209.1 CDS Bcen_5363 NC_008061.1 2665936 2667366 D KEGG: bur:Bcep18194_B0159 hypothetical protein; hypothetical protein 2665936..2667366 Burkholderia cenocepacia AU 1054 4095959 YP_625210.1 CDS Bcen_5364 NC_008061.1 2667541 2667696 D KEGG: bte:BTH_II2172 hypothetical protein; hypothetical protein 2667541..2667696 Burkholderia cenocepacia AU 1054 4095960 YP_625211.1 CDS Bcen_5365 NC_008061.1 2667816 2668295 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0161 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2667816..2668295 Burkholderia cenocepacia AU 1054 4095961 YP_625212.1 CDS Bcen_5366 NC_008061.1 2668499 2671564 R TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_B0162 copper-translocating P-type ATPase; heavy metal translocating P-type ATPase complement(2668499..2671564) Burkholderia cenocepacia AU 1054 4095962 YP_625213.1 CDS Bcen_5367 NC_008061.1 2672031 2673467 D PFAM: protein of unknown function DUF1214; KEGG: bur:Bcep18194_B0165 hypothetical protein; hypothetical protein 2672031..2673467 Burkholderia cenocepacia AU 1054 4095963 YP_625214.1 CDS Bcen_5368 NC_008061.1 2673619 2677446 D PFAM: protein of unknown function DUF748; KEGG: bur:Bcep18194_B0166 protein of unknown function DUF748; hypothetical protein 2673619..2677446 Burkholderia cenocepacia AU 1054 4095964 YP_625215.1 CDS Bcen_5369 NC_008061.1 2677515 2677736 R KEGG: bur:Bcep18194_B0167 hypothetical protein; hypothetical protein complement(2677515..2677736) Burkholderia cenocepacia AU 1054 4095965 YP_625216.1 CDS Bcen_5370 NC_008061.1 2677987 2679663 D PFAM: sulfatase; KEGG: bur:Bcep18194_B0168 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 2677987..2679663 Burkholderia cenocepacia AU 1054 4095966 YP_625217.1 CDS Bcen_5371 NC_008061.1 2679769 2680665 R PFAM: regulatory protein, LysR; KEGG: bps:BPSS0246 LysR-family transcriptional regulator; LysR family transcriptional regulator complement(2679769..2680665) Burkholderia cenocepacia AU 1054 4094948 YP_625218.1 CDS Bcen_5372 NC_008061.1 2680730 2681677 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transport system, membrane protein; binding-protein-dependent transport system inner membrane protein 2680730..2681677 Burkholderia cenocepacia AU 1054 4094949 YP_625219.1 CDS Bcen_5373 NC_008061.1 2681685 2682728 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bma:BMAA1821 ABC transporter, ATP-binding protein; ABC transporter 2681685..2682728 Burkholderia cenocepacia AU 1054 4094950 YP_625220.1 CDS Bcen_5374 NC_008061.1 2682755 2683843 D KEGG: ABC transporter, periplasmic substrate-binding protein; ABC transporter, periplasmic substrate-binding protein 2682755..2683843 Burkholderia cenocepacia AU 1054 4094951 YP_625221.1 CDS Bcen_5375 NC_008061.1 2683854 2684663 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bps:BPSS0250 ABC transport system, membrane protein; binding-protein-dependent transport systems inner membrane component 2683854..2684663 Burkholderia cenocepacia AU 1054 4094952 YP_625222.1 CDS Bcen_5376 NC_008061.1 2684812 2685915 R PFAM: transposase, IS4; KEGG: gsu:GSU2597 ISGsu2, transposase; transposase, IS4 complement(2684812..2685915) Burkholderia cenocepacia AU 1054 4094953 YP_625223.1 CDS Bcen_5377 NC_008061.1 2686018 2686572 D TIGRFAM: conserved hypothetical protein; KEGG: conserved hypothetical protein TIGR00725; hypothetical protein 2686018..2686572 Burkholderia cenocepacia AU 1054 4094954 YP_625224.1 CDS Bcen_5378 NC_008061.1 2686694 2686888 D KEGG: bur:Bcep18194_B0170 hypothetical protein; hypothetical protein 2686694..2686888 Burkholderia cenocepacia AU 1054 4094955 YP_625225.1 CDS Bcen_5379 NC_008061.1 2687009 2688325 D PFAM: HipA-like-like; KEGG: atc:AGR_pAT_166 hypothetical protein VC0815; HipA-like protein 2687009..2688325 Burkholderia cenocepacia AU 1054 4094956 YP_625226.1 CDS Bcen_5380 NC_008061.1 2688340 2688624 D hypothetical protein 2688340..2688624 Burkholderia cenocepacia AU 1054 4094957 YP_625227.1 CDS Bcen_5381 NC_008061.1 2688747 2688926 R KEGG: bur:Bcep18194_B0173 hypothetical protein; hypothetical protein complement(2688747..2688926) Burkholderia cenocepacia AU 1054 4094958 YP_625228.1 CDS Bcen_5382 NC_008061.1 2688898 2689905 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: bur:Bcep18194_B0174 cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase, subunit II complement(2688898..2689905) Burkholderia cenocepacia AU 1054 4094959 YP_625229.1 CDS Bcen_5383 NC_008061.1 2689935 2691614 R PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: bur:Bcep18194_B0175 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase, subunit I complement(2689935..2691614) Burkholderia cenocepacia AU 1054 4094960 YP_625230.1 CDS Bcen_5384 NC_008061.1 2691742 2692143 D KEGG: bur:Bcep18194_B0176 hypothetical protein; hypothetical protein 2691742..2692143 Burkholderia cenocepacia AU 1054 4094961 YP_625231.1 CDS Bcen_5385 NC_008061.1 2692157 2692708 D KEGG: bur:Bcep18194_B0177 hypothetical protein; hypothetical protein 2692157..2692708 Burkholderia cenocepacia AU 1054 4094962 YP_625232.1 CDS Bcen_5386 NC_008061.1 2692825 2693838 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bur:Bcep18194_B0178 threonine aldolase; threonine aldolase 2692825..2693838 Burkholderia cenocepacia AU 1054 4094963 YP_625233.1 CDS Bcen_5387 NC_008061.1 2693943 2694155 R KEGG: bur:Bcep18194_B0179 hypothetical protein; hypothetical protein complement(2693943..2694155) Burkholderia cenocepacia AU 1054 4094964 YP_625234.1 CDS Bcen_5388 NC_008061.1 2694315 2695220 R specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein complement(2694315..2695220) Burkholderia cenocepacia AU 1054 4094965 YP_625235.1 CDS Bcen_5389 NC_008061.1 2695508 2696578 D PFAM: beta-lactamase-like; KEGG: bur:Bcep18194_B0182 beta-lactamase-like; beta-lactamase-like protein 2695508..2696578 Burkholderia cenocepacia AU 1054 4094966 YP_625236.1 CDS Bcen_5390 NC_008061.1 2696705 2697364 D PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_B0183 glutathione S-transferase-like; glutathione S-transferase 2696705..2697364 Burkholderia cenocepacia AU 1054 4094812 YP_625237.1 CDS Bcen_5391 NC_008061.1 2697467 2698192 R PFAM: phosphoesterase, PA-phosphatase related; KEGG: bur:Bcep18194_B0184 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase complement(2697467..2698192) Burkholderia cenocepacia AU 1054 4094813 YP_625238.1 CDS Bcen_5392 NC_008061.1 2698576 2699814 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0185 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(2698576..2699814) Burkholderia cenocepacia AU 1054 4094814 YP_625239.1 CDS Bcen_5393 NC_008061.1 2699916 2700899 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0186 transcriptional regulator, LysR family; LysR family transcriptional regulator 2699916..2700899 Burkholderia cenocepacia AU 1054 4094815 YP_625240.1 CDS Bcen_5394 NC_008061.1 2700929 2701567 R PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_B0187 DsbA oxidoreductase; DSBA oxidoreductase complement(2700929..2701567) Burkholderia cenocepacia AU 1054 4094816 YP_625241.1 CDS Bcen_5395 NC_008061.1 2701713 2702531 R PFAM: regulatory proteins, IclR; KEGG: aci:ACIAD2817 transcriptional regulator; IclR family transcriptional regulator complement(2701713..2702531) Burkholderia cenocepacia AU 1054 4094817 YP_625242.1 CDS Bcen_5396 NC_008061.1 2702705 2703691 D PFAM: pyruvate carboxyltransferase; KEGG: aci:ACIAD2820 hydroxymethylglutaryl-CoA lyase; pyruvate carboxyltransferase 2702705..2703691 Burkholderia cenocepacia AU 1054 4094818 YP_625243.1 CDS Bcen_5397 NC_008061.1 2703688 2704980 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ppu:PP3393 CaiB/BaiF family protein; L-carnitine dehydratase/bile acid-inducible protein F 2703688..2704980 Burkholderia cenocepacia AU 1054 4094819 YP_625244.1 CDS Bcen_5398 NC_008061.1 2705064 2706371 D PFAM: major facilitator superfamily MFS_1; KEGG: aci:ACIAD2822 transport protein (MFS superfamily); major facilitator transporter 2705064..2706371 Burkholderia cenocepacia AU 1054 4094820 YP_625245.1 CDS Bcen_5399 NC_008061.1 2706373 2707488 D PFAM: amidohydrolase 2; KEGG: bpa:BPP1279 hypothetical protein; amidohydrolase 2 2706373..2707488 Burkholderia cenocepacia AU 1054 4094821 YP_625246.1 CDS Bcen_5400 NC_008061.1 2707504 2707980 R PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: bur:Bcep18194_B0188 hypothetical protein; activator of Hsp90 ATPase-like protein complement(2707504..2707980) Burkholderia cenocepacia AU 1054 4094822 YP_625247.1 CDS Bcen_5401 NC_008061.1 2708100 2708585 R PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: bur:Bcep18194_B0189 hypothetical protein; activator of Hsp90 ATPase-like protein complement(2708100..2708585) Burkholderia cenocepacia AU 1054 4094823 YP_625248.1 CDS Bcen_5402 NC_008061.1 2708557 2708952 R PFAM: regulatory protein, ArsR; KEGG: bur:Bcep18194_B0190 transcriptional regulator, ArsR family; ArsR family transcriptional regulator complement(2708557..2708952) Burkholderia cenocepacia AU 1054 4094824 YP_625249.1 CDS Bcen_5403 NC_008061.1 2709126 2709656 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0191 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2709126..2709656 Burkholderia cenocepacia AU 1054 4094825 YP_625250.1 CDS Bcen_5404 NC_008061.1 2709682 2710260 D KEGG: bur:Bcep18194_B0194 hypothetical protein; hypothetical protein 2709682..2710260 Burkholderia cenocepacia AU 1054 4094826 YP_625251.1 CDS Bcen_5405 NC_008061.1 2710303 2710890 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B0195 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2710303..2710890) Burkholderia cenocepacia AU 1054 4094827 YP_625252.1 CDS Bcen_5406 NC_008061.1 2711231 2711935 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_B0196 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2711231..2711935 Burkholderia cenocepacia AU 1054 4094828 YP_625253.1 CDS Bcen_5407 NC_008061.1 2711994 2713196 R enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase complement(2711994..2713196) Burkholderia cenocepacia AU 1054 4094829 YP_625254.1 CDS Bcen_5408 NC_008061.1 2713357 2713890 D KEGG: bur:Bcep18194_B0198 transcriptional regulators-like; transcriptional regulator 2713357..2713890 Burkholderia cenocepacia AU 1054 4094830 YP_625255.1 CDS Bcen_5409 NC_008061.1 2713979 2715301 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B0199 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2713979..2715301 Burkholderia cenocepacia AU 1054 4094831 YP_625256.1 CDS Bcen_5410 NC_008061.1 2715298 2715768 D KEGG: bur:Bcep18194_B0200 integral membrane protein-like; integral membrane protein-like protein 2715298..2715768 Burkholderia cenocepacia AU 1054 4094598 YP_625257.1 CDS Bcen_5411 NC_008061.1 2715859 2716728 D PFAM: thiol-disulphide oxidoreductase DCC; KEGG: bur:Bcep18194_B0201 thiol-disulphide oxidoreductase DCC; thiol-disulfide oxidoreductase DCC 2715859..2716728 Burkholderia cenocepacia AU 1054 4094599 YP_625258.1 CDS Bcen_5412 NC_008061.1 2716725 2718224 D TIGRFAM: conserved hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B0202 hypothetical protein; hypothetical protein 2716725..2718224 Burkholderia cenocepacia AU 1054 4094600 YP_625259.1 CDS Bcen_5413 NC_008061.1 2718296 2718919 D PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_B0203 glutathione S-transferase-like; glutathione S-transferase 2718296..2718919 Burkholderia cenocepacia AU 1054 4094601 YP_625260.1 CDS Bcen_5414 NC_008061.1 2719000 2720421 R PFAM: beta-lactamase; KEGG: bur:Bcep18194_B0204 beta-lactamase; beta-lactamase complement(2719000..2720421) Burkholderia cenocepacia AU 1054 4094602 YP_625261.1 CDS Bcen_5415 NC_008061.1 2720691 2721110 D PFAM: histidine triad (HIT) protein; KEGG: bur:Bcep18194_B0206 histidine triad (HIT) protein; histidine triad (HIT) protein 2720691..2721110 Burkholderia cenocepacia AU 1054 4094603 YP_625262.1 CDS Bcen_5416 NC_008061.1 2721363 2721527 D KEGG: bur:Bcep18194_B0207 hypothetical protein; hypothetical protein 2721363..2721527 Burkholderia cenocepacia AU 1054 4094604 YP_625263.1 CDS Bcen_5417 NC_008061.1 2721682 2722341 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bur:Bcep18194_B0208 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 2721682..2722341 Burkholderia cenocepacia AU 1054 4094605 YP_625264.1 CDS Bcen_5418 NC_008061.1 2722719 2723156 D PFAM: 17 kDa surface antigen; KEGG: bur:Bcep18194_B0209 conserved hypothetical membrane protein; 17 kDa surface antigen 2722719..2723156 Burkholderia cenocepacia AU 1054 4094606 YP_625265.1 CDS Bcen_5419 NC_008061.1 2723176 2723454 D hypothetical protein 2723176..2723454 Burkholderia cenocepacia AU 1054 4094607 YP_625266.1 CDS Bcen_5420 NC_008061.1 2724022 2724858 D PFAM: protein of unknown function DUF861, cupin_3; KEGG: bur:Bcep18194_B0211 protein of unknown function DUF861; hypothetical protein 2724022..2724858 Burkholderia cenocepacia AU 1054 4094608 YP_625267.1 CDS Bcen_5421 NC_008061.1 2725117 2725626 R KEGG: bur:Bcep18194_B2840 hypothetical protein; hypothetical protein complement(2725117..2725626) Burkholderia cenocepacia AU 1054 4094609 YP_625268.1 CDS Bcen_5422 NC_008061.1 2725997 2726884 D PFAM: regulatory protein, LysR; KEGG: zmo:ZMO1857 probable transcriptional regulator; LysR family transcriptional regulator 2725997..2726884 Burkholderia cenocepacia AU 1054 4094610 YP_625269.1 CDS Bcen_5423 NC_008061.1 2727447 2728286 R PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: bur:Bcep18194_B0213 aminoglycoside/hydroxyurea antibiotic resistance kinase; aminoglycoside/hydroxyurea antibiotic resistance kinase complement(2727447..2728286) Burkholderia cenocepacia AU 1054 4094611 YP_625270.1 CDS Bcen_5424 NC_008061.1 2728471 2730600 D KEGG: bur:Bcep18194_B0214 penicillin-binding protein 1A TIGRFAM: Penicillin-binding protein 1A; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; penicillin-binding protein 1A 2728471..2730600 Burkholderia cenocepacia AU 1054 4094612 YP_625271.1 CDS Bcen_5425 NC_008061.1 2730609 2731220 D PFAM: protein of unknown function UPF0126; KEGG: bur:Bcep18194_B0215 protein of unknown function UPF0126; hypothetical protein 2730609..2731220 Burkholderia cenocepacia AU 1054 4094613 YP_625272.1 CDS Bcen_5426 NC_008061.1 2731252 2731629 R KEGG: bur:Bcep18194_B0216 hypothetical protein; hypothetical protein complement(2731252..2731629) Burkholderia cenocepacia AU 1054 4094614 YP_625273.1 CDS hmuV NC_008061.1 2731747 2732577 R with HmuTU is involved in the import of hemin; hemin importer ATP-binding subunit complement(2731747..2732577) Burkholderia cenocepacia AU 1054 4094615 YP_625274.1 CDS Bcen_5428 NC_008061.1 2732597 2733685 R PFAM: transport system permease protein; KEGG: bur:Bcep18194_B0218 ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit; transport system permease complement(2732597..2733685) Burkholderia cenocepacia AU 1054 4094616 YP_625275.1 CDS Bcen_5429 NC_008061.1 2733701 2734618 R PFAM: periplasmic binding protein; KEGG: bur:Bcep18194_B0219 ABC cobalamin/Fe3+-siderophore transporter, periplasmic ligand binding protein; periplasmic binding protein complement(2733701..2734618) Burkholderia cenocepacia AU 1054 4094448 YP_625276.1 CDS Bcen_5430 NC_008061.1 2734615 2735706 R PFAM: Haemin-degrading; KEGG: bur:Bcep18194_B0220 heme degradation protein; hemin-degrading protein complement(2734615..2735706) Burkholderia cenocepacia AU 1054 4094449 YP_625277.1 CDS Bcen_5431 NC_008061.1 2735756 2738023 R TIGRFAM: TonB-dependent haemoglobin/transferrin/lactoferrin receptor; PFAM: TonB-dependent receptor; KEGG: bur:Bcep18194_B0221 TonB-dependent haemoglobin/transferrin/lactoferrin receptor; TonB-dependent hemoglobin/transferrin/lactoferrin receptor complement(2735756..2738023) Burkholderia cenocepacia AU 1054 4094450 YP_625278.1 CDS Bcen_5432 NC_008061.1 2738251 2738478 R KEGG: bur:Bcep18194_B0222 hypothetical protein; hypothetical protein complement(2738251..2738478) Burkholderia cenocepacia AU 1054 4094451 YP_625279.1 CDS Bcen_5433 NC_008061.1 2738668 2739051 R KEGG: bur:Bcep18194_B0223 hypothetical protein; hypothetical protein complement(2738668..2739051) Burkholderia cenocepacia AU 1054 4094452 YP_625280.1 CDS Bcen_5434 NC_008061.1 2739175 2739435 R KEGG: bur:Bcep18194_B0224 hypothetical protein; hypothetical protein complement(2739175..2739435) Burkholderia cenocepacia AU 1054 4094453 YP_625281.1 CDS Bcen_5435 NC_008061.1 2739655 2740812 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B0225 outer membrane protein (porin); porin complement(2739655..2740812) Burkholderia cenocepacia AU 1054 4094454 YP_625282.1 CDS Bcen_5436 NC_008061.1 2741407 2742213 D TIGRFAM: Lipoprotein YaeC; PFAM: NLPA lipoprotein; KEGG: bur:Bcep18194_B0226 lipoprotein, YaeC family; lipoprotein YaeC 2741407..2742213 Burkholderia cenocepacia AU 1054 4094455 YP_625283.1 CDS Bcen_5437 NC_008061.1 2742371 2743486 R PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bur:Bcep18194_B0227 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase complement(2742371..2743486) Burkholderia cenocepacia AU 1054 4094456 YP_625284.1 CDS Bcen_5438 NC_008061.1 2743709 2744491 R TIGRFAM: Lysine-arginine-ornithine-binding periplasmic protein; PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_B0228 lysine-arginine-ornithine ABC transporter, periplasmic ligand binding protein; lysine-arginine-ornithine-binding periplasmic protein complement(2743709..2744491) Burkholderia cenocepacia AU 1054 4094457 YP_625285.1 CDS Bcen_5439 NC_008061.1 2744718 2745638 R PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0229 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2744718..2745638) Burkholderia cenocepacia AU 1054 4094458 YP_625286.1 CDS Bcen_5440 NC_008061.1 2745699 2746646 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0230 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2745699..2746646) Burkholderia cenocepacia AU 1054 4094459 YP_625287.1 CDS Bcen_5441 NC_008061.1 2746696 2747061 D KEGG: bur:Bcep18194_B0231 hypothetical protein; hypothetical protein 2746696..2747061 Burkholderia cenocepacia AU 1054 4094460 YP_625288.1 CDS Bcen_5442 NC_008061.1 2747058 2747459 D KEGG: bur:Bcep18194_B0232 hypothetical protein; hypothetical protein 2747058..2747459 Burkholderia cenocepacia AU 1054 4094461 YP_625289.1 CDS Bcen_5443 NC_008061.1 2747469 2748062 R KEGG: bur:Bcep18194_B0233 hypothetical protein; hypothetical protein complement(2747469..2748062) Burkholderia cenocepacia AU 1054 4094462 YP_625290.1 CDS Bcen_5444 NC_008061.1 2748265 2749653 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_B0234 xanthine/uracil/vitamin C transporter; xanthine/uracil/vitamin C permease complement(2748265..2749653) Burkholderia cenocepacia AU 1054 4094463 YP_625291.1 CDS Bcen_5445 NC_008061.1 2750183 2750860 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B0235 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2750183..2750860) Burkholderia cenocepacia AU 1054 4094464 YP_625292.1 CDS Bcen_5446 NC_008061.1 2750909 2751574 D PFAM: O-methyltransferase, family 3; KEGG: bur:Bcep18194_B0236 O-methyltransferase, family 3; O-methyltransferase family protein 2750909..2751574 Burkholderia cenocepacia AU 1054 4094465 YP_625293.1 CDS Bcen_5447 NC_008061.1 2751697 2752215 R KEGG: bur:Bcep18194_B0237 hypothetical protein; hypothetical protein complement(2751697..2752215) Burkholderia cenocepacia AU 1054 4094466 YP_625294.1 CDS Bcen_5448 NC_008061.1 2752354 2753298 R PFAM: cyclase; KEGG: rba:RB3656 probable polyketide cyclase; cyclase complement(2752354..2753298) Burkholderia cenocepacia AU 1054 4094467 YP_625295.1 CDS Bcen_5449 NC_008061.1 2753318 2754433 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bur:Bcep18194_B0239 NADH-flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(2753318..2754433) Burkholderia cenocepacia AU 1054 4094350 YP_625296.1 CDS dkgB NC_008061.1 2754503 2755309 R catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; 2,5-diketo-D-gluconate reductase B complement(2754503..2755309) Burkholderia cenocepacia AU 1054 4094351 YP_625297.1 CDS Bcen_5451 NC_008061.1 2755461 2756411 R PFAM: luciferase-like; KEGG: atc:AGR_L_1143 hypothetical protein PA1186; luciferase-like protein complement(2755461..2756411) Burkholderia cenocepacia AU 1054 4094352 YP_625298.1 CDS Bcen_5452 NC_008061.1 2756428 2756751 R hypothetical protein complement(2756428..2756751) Burkholderia cenocepacia AU 1054 4094353 YP_625299.1 CDS Bcen_5453 NC_008061.1 2756780 2757982 R PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_II2154 major facilitator family transporter; major facilitator transporter complement(2756780..2757982) Burkholderia cenocepacia AU 1054 4094354 YP_625300.1 CDS Bcen_5454 NC_008061.1 2758084 2759028 D PFAM: regulatory protein, LysR; KEGG: bur:Bcep18194_B0241 transcriptional regulator, LysR family; LysR family transcriptional regulator 2758084..2759028 Burkholderia cenocepacia AU 1054 4094355 YP_625301.1 CDS Bcen_5455 NC_008061.1 2759099 2760574 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(2759099..2760574) Burkholderia cenocepacia AU 1054 4094356 YP_625302.1 CDS Bcen_5456 NC_008061.1 2760777 2761355 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B0243 transcriptional regulator, TetR family; TetR family transcriptional regulator 2760777..2761355 Burkholderia cenocepacia AU 1054 4094357 YP_625303.1 CDS Bcen_5457 NC_008061.1 2761508 2762383 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_B0244 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2761508..2762383 Burkholderia cenocepacia AU 1054 4094358 YP_625304.1 CDS Bcen_5458 NC_008061.1 2762411 2763322 R PFAM: regulatory protein, LysR; KEGG: vfi:VFA0724 transcriptional regulators, LysR family; LysR family transcriptional regulator complement(2762411..2763322) Burkholderia cenocepacia AU 1054 4094359 YP_625305.1 CDS Bcen_5459 NC_008061.1 2763572 2764915 D PFAM: beta-lactamase; KEGG: pae:PA5542 hypothetical protein; beta-lactamase 2763572..2764915 Burkholderia cenocepacia AU 1054 4094360 YP_625306.1 CDS Bcen_5460 NC_008061.1 2765025 2765603 R TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_B0249 alkylhydroperoxidase AhpD core; hypothetical protein complement(2765025..2765603) Burkholderia cenocepacia AU 1054 4094361 YP_625307.1 CDS Bcen_5461 NC_008061.1 2765637 2766620 R PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B0250 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase complement(2765637..2766620) Burkholderia cenocepacia AU 1054 4094362 YP_625308.1 CDS Bcen_5462 NC_008061.1 2766666 2767304 R PFAM: HMG-I and HMG-Y, DNA-binding; KEGG: bur:Bcep18194_B0251 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2766666..2767304) Burkholderia cenocepacia AU 1054 4094363 YP_625309.1 CDS Bcen_5463 NC_008061.1 2767508 2768218 R SMART: regulatory proteins, IclR; KEGG: reu:Reut_B4617 regulatory protein, IclR; IclR family transcriptional regulator complement(2767508..2768218) Burkholderia cenocepacia AU 1054 4094364 YP_625310.1 CDS Bcen_5464 NC_008061.1 2768384 2769082 D PFAM: Dimethylmenaquinone methyltransferase; KEGG: reu:Reut_B4616 dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 2768384..2769082 Burkholderia cenocepacia AU 1054 4094365 YP_625311.1 CDS Bcen_5465 NC_008061.1 2769082 2770029 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; KEGG: reu:Reut_B4615 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 2769082..2770029 Burkholderia cenocepacia AU 1054 4094366 YP_625312.1 CDS Bcen_5466 NC_008061.1 2770051 2770992 D PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: reu:Reut_B4613 gluconolactonase; SMP-30/gluconolaconase/LRE-like region 2770051..2770992 Burkholderia cenocepacia AU 1054 4094367 YP_625313.1 CDS Bcen_5467 NC_008061.1 2771079 2772458 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2278 MFS permease; major facilitator transporter 2771079..2772458 Burkholderia cenocepacia AU 1054 4094368 YP_625314.1 CDS Bcen_5468 NC_008061.1 2772508 2773659 D PFAM: porin, Gram-negative type; KEGG: reu:Reut_A3097 porin, gram-negative type; porin 2772508..2773659 Burkholderia cenocepacia AU 1054 4094526 YP_625315.1 CDS Bcen_5469 NC_008061.1 2773670 2774716 D PFAM: amidohydrolase 2; KEGG: bpa:BPP1288 hypothetical protein; amidohydrolase 2 2773670..2774716 Burkholderia cenocepacia AU 1054 4094527 YP_625316.1 CDS Bcen_5470 NC_008061.1 2774713 2775993 D PFAM: General substrate transporter; KEGG: sma:SAV6941 transmembrane efflux protein; major facilitator transporter 2774713..2775993 Burkholderia cenocepacia AU 1054 4094528 YP_625317.1 CDS Bcen_5471 NC_008061.1 2775990 2777228 D PFAM: protein of unknown function DUF894, DitE; KEGG: rsp:RSP_3035 transporter, major facilitator superfamily (MFS); major facilitator transporter 2775990..2777228 Burkholderia cenocepacia AU 1054 4094529 YP_625318.1 CDS Bcen_5472 NC_008061.1 2777240 2778562 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2280 tartrate transporter; major facilitator transporter 2777240..2778562 Burkholderia cenocepacia AU 1054 4094530 YP_625319.1 CDS Bcen_5473 NC_008061.1 2778565 2779497 D PFAM: amidohydrolase 2; KEGG: bja:blr2276 2-pyrone-4,6-dicarbaxylate hydrolase; amidohydrolase 2 2778565..2779497 Burkholderia cenocepacia AU 1054 4094531 YP_625320.1 CDS Bcen_5474 NC_008061.1 2779613 2780506 R PFAM: regulatory protein, LysR; KEGG: rso:RSc3332 probable transcription regulator protein; LysR family transcriptional regulator complement(2779613..2780506) Burkholderia cenocepacia AU 1054 4094532 YP_625321.1 CDS Bcen_5475 NC_008061.1 2780614 2781222 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc3331 short chain dehydrogenase; short chain dehydrogenase 2780614..2781222 Burkholderia cenocepacia AU 1054 4094533 YP_625322.1 CDS Bcen_5476 NC_008061.1 2781649 2781876 D KEGG: hypothetical protein; hypothetical protein 2781649..2781876 Burkholderia cenocepacia AU 1054 4094534 YP_625323.1 CDS Bcen_5477 NC_008061.1 2782024 2782929 D PFAM: regulatory protein, LysR; KEGG: bja:blr5548 transcriptional regulatory protein; LysR family transcriptional regulator 2782024..2782929 Burkholderia cenocepacia AU 1054 4094535 YP_625324.1 CDS Bcen_5478 NC_008061.1 2783006 2783899 D PFAM: regulatory protein, LysR; KEGG: rso:RS03073 probable transcription regulator protein; LysR family transcriptional regulator 2783006..2783899 Burkholderia cenocepacia AU 1054 4094536 YP_625325.1 CDS Bcen_5480 NC_008061.1 2785656 2786123 D PFAM: ferredoxin; KEGG: bur:Bcep18194_B0806 (2Fe-2S)-binding protein; (2Fe-2S)-binding protein 2785656..2786123 Burkholderia cenocepacia AU 1054 4094538 YP_625326.1 CDS Bcen_5481 NC_008061.1 2786181 2788445 D KEGG: rso:RSc0627 isoquinoline 1-oxidoreductase beta subunit; isoquinoline 1-oxidoreductase subunit beta 2786181..2788445 Burkholderia cenocepacia AU 1054 4094539 YP_625327.1 CDS Bcen_5482 NC_008062.1 148 606 D PFAM: ferredoxin; [2Fe-2S]-binding; KEGG: rso:RS05442 isoquinoline 1-oxidoreductase, alpha subunit; (2Fe-2S)-binding 148..606 Burkholderia cenocepacia AU 1054 4097265 YP_625328.1 CDS Bcen_5483 NC_008062.1 628 3120 D TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rso:RS05441 probable dehydrogenase, large chain oxidoreductase protein; twin-arginine translocation pathway signal 628..3120 Burkholderia cenocepacia AU 1054 4097266 YP_625329.1 CDS Bcen_5484 NC_008062.1 3221 4288 R PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_C7176 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(3221..4288) Burkholderia cenocepacia AU 1054 4097267 YP_625330.1 CDS Bcen_5485 NC_008062.1 4597 5844 D PFAM: dienelactone hydrolase; protein of unknown function DUF1486; KEGG: bur:Bcep18194_C7177 carboxymethylenebutenolidase; carboxymethylenebutenolidase 4597..5844 Burkholderia cenocepacia AU 1054 4097268 YP_625331.1 CDS Bcen_5486 NC_008062.1 5885 6673 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_C7178 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 5885..6673 Burkholderia cenocepacia AU 1054 4097269 YP_625332.1 CDS Bcen_5487 NC_008062.1 6738 7976 D KEGG: bur:Bcep18194_C7179 hypothetical protein; hypothetical protein 6738..7976 Burkholderia cenocepacia AU 1054 4097270 YP_625333.1 CDS Bcen_5488 NC_008062.1 7982 8509 D PFAM: flavin reductase-like, FMN-binding; KEGG: bur:Bcep18194_C7180 flavin reductase-like, FMN-binding; flavin reductase-like, FMN-binding 7982..8509 Burkholderia cenocepacia AU 1054 4097034 YP_625334.1 CDS Bcen_5489 NC_008062.1 8546 9502 D KEGG: bur:Bcep18194_C7181 protein involved in MetA-pathway of phenol degradation-like; protein involved in MetA-pathway of phenol degradation-like 8546..9502 Burkholderia cenocepacia AU 1054 4097035 YP_625335.1 CDS Bcen_5490 NC_008062.1 9782 10756 R PFAM: type II secretion system protein; KEGG: bur:Bcep18194_C7193 Flp pilus assembly protein TadC; type II secretion system protein complement(9782..10756) Burkholderia cenocepacia AU 1054 4097036 YP_625336.1 CDS Bcen_5491 NC_008062.1 10793 11770 R PFAM: type II secretion system protein; KEGG: bur:Bcep18194_C7194 Flp pilus assembly protein TadB; type II secretion system protein complement(10793..11770) Burkholderia cenocepacia AU 1054 4097037 YP_625337.1 CDS Bcen_5492 NC_008062.1 11804 13168 R PFAM: type II secretion system protein E; KEGG: bur:Bcep18194_C7195 Flp pilus assembly protein ATPase CpaF; type II secretion system protein E complement(11804..13168) Burkholderia cenocepacia AU 1054 4097038 YP_625338.1 CDS Bcen_5493 NC_008062.1 13187 14395 R PFAM: response regulator receiver; KEGG: bur:Bcep18194_C7196 response regulator receiver domain protein (CheY-like); response regulator receiver protein complement(13187..14395) Burkholderia cenocepacia AU 1054 4097039 YP_625339.1 CDS Bcen_5494 NC_008062.1 14418 14861 R PFAM: TadE-like; KEGG: bur:Bcep18194_C7197 TadE-like protein; TadE-like complement(14418..14861) Burkholderia cenocepacia AU 1054 4097040 YP_625340.1 CDS Bcen_5495 NC_008062.1 14858 15391 R PFAM: TadE-like; KEGG: bur:Bcep18194_C7198 TadE-like protein; TadE-like complement(14858..15391) Burkholderia cenocepacia AU 1054 4097041 YP_625341.1 CDS Bcen_5496 NC_008062.1 15405 16676 R KEGG: bur:Bcep18194_C7199 hypothetical protein; hypothetical protein complement(15405..16676) Burkholderia cenocepacia AU 1054 4097042 YP_625342.1 CDS Bcen_5497 NC_008062.1 16702 17022 R KEGG: bur:Bcep18194_C7200 hypothetical protein; hypothetical protein complement(16702..17022) Burkholderia cenocepacia AU 1054 4097043 YP_625343.1 CDS Bcen_5498 NC_008062.1 17019 18947 R PFAM: type II and III secretion system protein; transport-associated; KEGG: bur:Bcep18194_C7201 Flp pilus assembly protein secretin CpaC; type II and III secretion system protein complement(17019..18947) Burkholderia cenocepacia AU 1054 4097044 YP_625344.1 CDS Bcen_5499 NC_008062.1 19052 19891 R PFAM: Flp pilus assembly CpaB; KEGG: bur:Bcep18194_C7202 Flp pilus assembly CpaB; Flp pilus assembly CpaB complement(19052..19891) Burkholderia cenocepacia AU 1054 4097045 YP_625345.1 CDS Bcen_5500 NC_008062.1 19927 21327 R KEGG: bur:Bcep18194_C7203 ATPase; ATPase complement(19927..21327) Burkholderia cenocepacia AU 1054 4097046 YP_625346.1 CDS Bcen_5501 NC_008062.1 21371 21910 R PFAM: peptidase A24A, prepilin type IV; KEGG: bur:Bcep18194_C7204 peptidase A24A, prepilin type IV; peptidase A24A, prepilin type IV complement(21371..21910) Burkholderia cenocepacia AU 1054 4097047 YP_625347.1 CDS Bcen_5502 NC_008062.1 21939 22145 R PFAM: Flp/Fap pilin component; KEGG: bur:Bcep18194_C7205 Flp/Fap pilin component; Flp/Fap pilin component complement(21939..22145) Burkholderia cenocepacia AU 1054 4097048 YP_625348.1 CDS Bcen_5503 NC_008062.1 22228 22419 R PFAM: Flp/Fap pilin component; KEGG: bur:Bcep18194_C7206 Flp/Fap pilin component; Flp/Fap pilin component complement(22228..22419) Burkholderia cenocepacia AU 1054 4097049 YP_625349.1 CDS Bcen_5504 NC_008062.1 22559 22750 R PFAM: Flp/Fap pilin component; KEGG: bur:Bcep18194_C7207 Flp/Fap pilin component; Flp/Fap pilin component complement(22559..22750) Burkholderia cenocepacia AU 1054 4097050 YP_625350.1 CDS Bcen_5505 NC_008062.1 23256 23702 D hypothetical protein 23256..23702 Burkholderia cenocepacia AU 1054 4097051 YP_625351.1 CDS Bcen_5506 NC_008062.1 23800 25038 D KEGG: bur:Bcep18194_C7208 hypothetical protein; hypothetical protein 23800..25038 Burkholderia cenocepacia AU 1054 4097052 YP_625352.1 CDS Bcen_5507 NC_008062.1 25035 26414 D KEGG: bur:Bcep18194_C7209 hypothetical protein; hypothetical protein 25035..26414 Burkholderia cenocepacia AU 1054 4097053 YP_625353.1 CDS Bcen_5508 NC_008062.1 26439 27482 D PFAM: glycosyl transferase, family 2; KEGG: bur:Bcep18194_C7210 glycosyl transferase, family 2; glycosyl transferase family protein 26439..27482 Burkholderia cenocepacia AU 1054 4096734 YP_625354.1 CDS Bcen_5509 NC_008062.1 27495 27878 D PFAM: GtrA-like protein; KEGG: bur:Bcep18194_C7211 hypothetical protein; GtrA-like protein 27495..27878 Burkholderia cenocepacia AU 1054 4096735 YP_625355.1 CDS Bcen_5510 NC_008062.1 28174 28677 D KEGG: bur:Bcep18194_C7212 hypothetical protein; hypothetical protein 28174..28677 Burkholderia cenocepacia AU 1054 4096736 YP_625356.1 CDS Bcen_5511 NC_008062.1 28743 29282 D KEGG: bur:Bcep18194_C7213 hypothetical protein; hypothetical protein 28743..29282 Burkholderia cenocepacia AU 1054 4096737 YP_625357.1 CDS Bcen_5512 NC_008062.1 29355 30296 R PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_B1534 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(29355..30296) Burkholderia cenocepacia AU 1054 4096738 YP_625358.1 CDS Bcen_5513 NC_008062.1 30383 31504 R KEGG: plu:plu3801 hypothetical protein; hypothetical protein complement(30383..31504) Burkholderia cenocepacia AU 1054 4096739 YP_625359.1 CDS Bcen_5514 NC_008062.1 31899 33350 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll5865 multidrug resistance protein; major facilitator transporter 31899..33350 Burkholderia cenocepacia AU 1054 4096740 YP_625360.1 CDS Bcen_5515 NC_008062.1 33403 34671 D PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: ypm:YP3384 acetyl-CoA carboxylase; phosphoribosylglycinamide synthetase 33403..34671 Burkholderia cenocepacia AU 1054 4096741 YP_625361.1 CDS Bcen_5516 NC_008062.1 34680 35555 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7214 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(34680..35555) Burkholderia cenocepacia AU 1054 4096742 YP_625362.1 CDS Bcen_5517 NC_008062.1 35703 36647 D KEGG: bur:Bcep18194_C7215 hypothetical protein; hypothetical protein 35703..36647 Burkholderia cenocepacia AU 1054 4096743 YP_625363.1 CDS Bcen_5518 NC_008062.1 36685 37896 D PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: mlo:mll9226 argininosuccinate lyase; phosphoribosylglycinamide synthetase 36685..37896 Burkholderia cenocepacia AU 1054 4096744 YP_625364.1 CDS Bcen_5519 NC_008062.1 37880 39076 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4820 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(37880..39076) Burkholderia cenocepacia AU 1054 4096745 YP_625365.1 CDS Bcen_5520 NC_008062.1 39172 40062 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4819 transcriptional regulator, LysR family; LysR family transcriptional regulator 39172..40062 Burkholderia cenocepacia AU 1054 4096746 YP_625366.1 CDS Bcen_5521 NC_008062.1 40129 40743 R PFAM: NIPSNAP; KEGG: bur:Bcep18194_B2743 hypothetical protein; hypothetical protein complement(40129..40743) Burkholderia cenocepacia AU 1054 4096747 YP_625367.1 CDS Bcen_5522 NC_008062.1 40840 41760 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pst:PSPTO2617 transcriptional regulator, LysR family; LysR family transcriptional regulator 40840..41760 Burkholderia cenocepacia AU 1054 4096748 YP_625368.1 CDS Bcen_5523 NC_008062.1 41944 42168 R KEGG: bur:Bcep18194_B1150 hypothetical protein; hypothetical protein complement(41944..42168) Burkholderia cenocepacia AU 1054 4096749 YP_625369.1 CDS Bcen_5524 NC_008062.1 42444 42647 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: bur:Bcep18194_B1151 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(42444..42647) Burkholderia cenocepacia AU 1054 4096750 YP_625370.1 CDS Bcen_5525 NC_008062.1 42955 44058 R PFAM: alpha/beta hydrolase fold; KEGG: bja:blr7894 epoxide hydrolase; alpha/beta hydrolase fold complement(42955..44058) Burkholderia cenocepacia AU 1054 4096751 YP_625371.1 CDS Bcen_5526 NC_008062.1 44266 44895 D PFAM: regulatory protein, TetR; KEGG: pae:PA0475 probable transcriptional regulator; TetR family transcriptional regulator 44266..44895 Burkholderia cenocepacia AU 1054 4096752 YP_625372.1 CDS Bcen_5527 NC_008062.1 45251 46171 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppu:PP2997 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(45251..46171) Burkholderia cenocepacia AU 1054 4096542 YP_625373.1 CDS Bcen_5528 NC_008062.1 46253 47203 D KEGG: ppu:PP2998 2-dehydropantoate 2-reductase, TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase-like; Ketopantoate reductase ApbA/PanE-like; 2-dehydropantoate 2-reductase 46253..47203 Burkholderia cenocepacia AU 1054 4096543 YP_625374.1 CDS Bcen_5529 NC_008062.1 47200 47592 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppu:PP2999 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 47200..47592 Burkholderia cenocepacia AU 1054 4096544 YP_625375.1 CDS Bcen_5530 NC_008062.1 47595 48053 D PFAM: MaoC-like dehydratase; KEGG: ppu:PP3000 MaoC domain protein; MaoC-like dehydratase 47595..48053 Burkholderia cenocepacia AU 1054 4096545 YP_625376.1 CDS Bcen_5531 NC_008062.1 48053 49273 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ppu:PP3001 CaiB/BaiF family protein; L-carnitine dehydratase/bile acid-inducible protein F 48053..49273 Burkholderia cenocepacia AU 1054 4096546 YP_625377.1 CDS Bcen_5532 NC_008062.1 49270 50106 D KEGG: bja:bll6392 shikimate 5-dehydrogenase TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding-like; shikimate 5-dehydrogenase 49270..50106 Burkholderia cenocepacia AU 1054 4096547 YP_625378.1 CDS Bcen_5533 NC_008062.1 50284 51516 D PFAM: major facilitator superfamily MFS_1; KEGG: eba:c2A195 possible transporter; major facilitator transporter 50284..51516 Burkholderia cenocepacia AU 1054 4096548 YP_625379.1 CDS Bcen_5534 NC_008062.1 51630 52457 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gvi:glr1296 unknown protein; methyltransferase type 11 complement(51630..52457) Burkholderia cenocepacia AU 1054 4096549 YP_625380.1 CDS Bcen_5535 NC_008062.1 52744 53646 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: reu:Reut_C5900 NADP oxidoreductase, coenzyme F420-dependent:6-phosphogluconate dehydrogenase, NAD-binding:3-hydroxyacyl-CoA dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, NAD-binding complement(52744..53646) Burkholderia cenocepacia AU 1054 4096550 YP_625381.1 CDS Bcen_5536 NC_008062.1 53704 55032 R PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_A2617 general substrate transporter:major facilitator superfamily MFS_1; major facilitator transporter complement(53704..55032) Burkholderia cenocepacia AU 1054 4096551 YP_625382.1 CDS Bcen_5537 NC_008062.1 55428 56348 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pfl:PFL_3650 transcriptional regulator, LysR family; LysR family transcriptional regulator 55428..56348 Burkholderia cenocepacia AU 1054 4096552 YP_625383.1 CDS Bcen_5538 NC_008062.1 56651 57754 D KEGG: pfl:PFL_3649 tartrate dehydrogenase TIGRFAM: Tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 56651..57754 Burkholderia cenocepacia AU 1054 4096553 YP_625384.1 CDS Bcen_5539 NC_008062.1 57758 59206 D PFAM: aldehyde dehydrogenase; KEGG: pfl:PFL_3648 aldehyde dehydrogenase family protein; aldehyde dehydrogenase 57758..59206 Burkholderia cenocepacia AU 1054 4096554 YP_625385.1 CDS Bcen_5540 NC_008062.1 59486 60424 R PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: pca:Pcar_2430 cysteine synthase A; cysteine synthase complement(59486..60424) Burkholderia cenocepacia AU 1054 4096555 YP_625386.1 CDS Bcen_5541 NC_008062.1 60471 60878 R PFAM: membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG); KEGG: bja:bll4359 hypothetical protein; membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) complement(60471..60878) Burkholderia cenocepacia AU 1054 4096556 YP_625387.1 CDS Bcen_5542 NC_008062.1 61101 61967 R PFAM: NmrA-like; KEGG: mlo:mlr7972 hypothetical protein; NmrA-like complement(61101..61967) Burkholderia cenocepacia AU 1054 4096557 YP_625388.1 CDS Bcen_5543 NC_008062.1 62076 63098 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5810 transcriptional regulator, LysR family; LysR family transcriptional regulator 62076..63098 Burkholderia cenocepacia AU 1054 4096558 YP_625389.1 CDS Bcen_5544 NC_008062.1 63160 64212 D PFAM: transposase, IS891/IS1136/IS1341; transposase, IS605 OrfB; KEGG: noc:Noc_1587 transposase; transposase, IS605 OrfB 63160..64212 Burkholderia cenocepacia AU 1054 4096559 YP_625390.1 CDS Bcen_5545 NC_008062.1 64282 65244 R PFAM: ThiJ/PfpI; SMART: Helix-turn-helix, AraC type; KEGG: nmu:Nmul_A0916 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(64282..65244) Burkholderia cenocepacia AU 1054 4096560 YP_625391.1 CDS Bcen_5546 NC_008062.1 65397 66320 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mlo:mll1982 probable short chain oxidoreductase; short-chain dehydrogenase/reductase SDR 65397..66320 Burkholderia cenocepacia AU 1054 4096561 YP_625392.1 CDS Bcen_5547 NC_008062.1 66488 67228 R PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: pae:PA5525 probable transcriptional regulator; GntR family transcriptional regulator complement(66488..67228) Burkholderia cenocepacia AU 1054 4097330 YP_625393.1 CDS Bcen_5548 NC_008062.1 67225 68607 R PFAM: aminotransferase class-III; KEGG: glutamate-1-semialdehyde 2,1-aminomutase; aminotransferase complement(67225..68607) Burkholderia cenocepacia AU 1054 4097331 YP_625394.1 CDS Bcen_5549 NC_008062.1 68618 69952 R PFAM: glutamine synthetase, catalytic region; KEGG: glnA; glutamine synthetase family protein; glutamate--ammonia ligase complement(68618..69952) Burkholderia cenocepacia AU 1054 4097332 YP_625395.1 CDS Bcen_5550 NC_008062.1 70034 70381 R hypothetical protein complement(70034..70381) Burkholderia cenocepacia AU 1054 4097333 YP_625396.1 CDS Bcen_5551 NC_008062.1 70453 71217 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_B3691 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(70453..71217) Burkholderia cenocepacia AU 1054 4097334 YP_625397.1 CDS Bcen_5552 NC_008062.1 71359 72276 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: reu:Reut_B3692 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 71359..72276 Burkholderia cenocepacia AU 1054 4097335 YP_625398.1 CDS Bcen_5553 NC_008062.1 72412 72756 R KEGG: reu:Reut_A1130 regulatory protein, LysR:LysR, substrate-binding; regulatory protein, LysR complement(72412..72756) Burkholderia cenocepacia AU 1054 4097336 YP_625399.1 CDS Bcen_5554 NC_008062.1 72814 73551 R SMART: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_A4481 ABC chain amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(72814..73551) Burkholderia cenocepacia AU 1054 4097337 YP_625400.1 CDS Bcen_5555 NC_008062.1 73768 74679 R PFAM: ABC transporter related; SMART: ATPase; KEGG: dar:Daro_0079 ABC transporter related; ABC transporter related complement(73768..74679) Burkholderia cenocepacia AU 1054 4097338 YP_625401.1 CDS Bcen_5556 NC_008062.1 74725 75699 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dar:Daro_0080 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(74725..75699) Burkholderia cenocepacia AU 1054 4097339 YP_625402.1 CDS Bcen_5558 NC_008062.1 77632 81249 R PFAM: biotin/lipoyl attachment; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain-like; biotin carboxylase-like; KEGG: nmu:Nmul_A0943 allophanate hydrolase subunit 2; allophanate hydrolase subunit 2 complement(77632..81249) Burkholderia cenocepacia AU 1054 4097341 YP_625403.1 CDS Bcen_5559 NC_008062.1 81338 81994 R KEGG: tcx:Tcr_1791 hypothetical protein; hypothetical protein complement(81338..81994) Burkholderia cenocepacia AU 1054 4097342 YP_625404.1 CDS Bcen_5560 NC_008062.1 82006 82761 R KEGG: dar:Daro_0072 hypothetical protein; hypothetical protein complement(82006..82761) Burkholderia cenocepacia AU 1054 4097343 YP_625405.1 CDS Bcen_5561 NC_008062.1 82961 83227 D hypothetical protein 82961..83227 Burkholderia cenocepacia AU 1054 4097345 YP_625406.1 CDS Bcen_5562 NC_008062.1 83647 84669 D KEGG: dar:Daro_0081 ABC transport system substrate-binding protein; ABC transport system substrate-binding protein 83647..84669 Burkholderia cenocepacia AU 1054 4097347 YP_625407.1 CDS Bcen_5563 NC_008062.1 84817 85536 R PFAM: metallophosphoesterase; KEGG: psb:Psyr_2545 metallophosphoesterase; metallophosphoesterase complement(84817..85536) Burkholderia cenocepacia AU 1054 4097169 YP_625408.1 CDS Bcen_5564 NC_008062.1 85820 86395 R PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_2384 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase complement(85820..86395) Burkholderia cenocepacia AU 1054 4097170 YP_625409.1 CDS Bcen_5565 NC_008062.1 86662 87186 R PFAM: GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase complement(86662..87186) Burkholderia cenocepacia AU 1054 4097171 YP_625410.1 CDS Bcen_5566 NC_008062.1 87289 87750 R PFAM: NUDIX hydrolase; KEGG: bcz:BCZK2490 MutT/NUDIX family protein; NUDIX hydrolase complement(87289..87750) Burkholderia cenocepacia AU 1054 4097172 YP_625411.1 CDS Bcen_5567 NC_008062.1 88000 88527 R KEGG: sco:SCO7656 hypothetical protein; hypothetical protein complement(88000..88527) Burkholderia cenocepacia AU 1054 4097173 YP_625412.1 CDS Bcen_5568 NC_008062.1 88607 89173 R PFAM: protein of unknown function DUF925; KEGG: cvi:CV4214 hypothetical protein; hypothetical protein complement(88607..89173) Burkholderia cenocepacia AU 1054 4097174 YP_625413.1 CDS Bcen_5569 NC_008062.1 89432 90394 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4973 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(89432..90394) Burkholderia cenocepacia AU 1054 4097175 YP_625414.1 CDS Bcen_5570 NC_008062.1 91209 91442 D KEGG: reu:Reut_B3675 hypothetical protein; hypothetical protein 91209..91442 Burkholderia cenocepacia AU 1054 4097176 YP_625415.1 CDS Bcen_5573 NC_008062.1 92949 94214 D KEGG: bur:Bcep18194_C7221 poly(3-hydroxybutyrate) depolymerase-like; poly(3-hydroxybutyrate) depolymerase-like 92949..94214 Burkholderia cenocepacia AU 1054 4097178 YP_625416.1 CDS Bcen_5574 NC_008062.1 94262 96097 R PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; MHYT; KEGG: bur:Bcep18194_C7222 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase complement(94262..96097) Burkholderia cenocepacia AU 1054 4097179 YP_625417.1 CDS Bcen_5575 NC_008062.1 96115 97533 R PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD subdomain; KEGG: bur:Bcep18194_C7223 response regulator receiver (CheY-like) modulated metal-dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase complement(96115..97533) Burkholderia cenocepacia AU 1054 4097180 YP_625418.1 CDS Bcen_5576 NC_008062.1 97655 98110 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C7224 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase complement(97655..98110) Burkholderia cenocepacia AU 1054 4097181 YP_625419.1 CDS Bcen_5577 NC_008062.1 98368 98772 R KEGG: bur:Bcep18194_C7252 hypothetical protein; hypothetical protein complement(98368..98772) Burkholderia cenocepacia AU 1054 4097182 YP_625420.1 CDS Bcen_5578 NC_008062.1 98943 100148 R PFAM: sodium:dicarboxylate symporter; KEGG: bur:Bcep18194_C7251 sodium-dicarboxylate symporter; sodium:dicarboxylate symporter complement(98943..100148) Burkholderia cenocepacia AU 1054 4097183 YP_625421.1 CDS Bcen_5579 NC_008062.1 100165 100827 R PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: bur:Bcep18194_C7250 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(100165..100827) Burkholderia cenocepacia AU 1054 4097184 YP_625422.1 CDS Bcen_5580 NC_008062.1 100978 101442 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C7249 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 100978..101442 Burkholderia cenocepacia AU 1054 4097185 YP_625423.1 CDS Bcen_5581 NC_008062.1 101488 101799 D hypothetical protein 101488..101799 Burkholderia cenocepacia AU 1054 4097186 YP_625424.1 CDS Bcen_5582 NC_008062.1 102211 103377 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_C7455 outer membrane protein (porin); porin 102211..103377 Burkholderia cenocepacia AU 1054 4097187 YP_625425.1 CDS Bcen_5583 NC_008062.1 103410 104375 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_B2674 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(103410..104375) Burkholderia cenocepacia AU 1054 4096771 YP_625426.1 CDS Bcen_5584 NC_008062.1 104493 105713 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2673 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 104493..105713 Burkholderia cenocepacia AU 1054 4096772 YP_625427.1 CDS Bcen_5585 NC_008062.1 105710 106606 D PFAM: Ketopantoate reductase ApbA/PanE-like; KEGG: eca:ECA1579 probable ketopantoate reductase; 2-dehydropantoate 2-reductase 105710..106606 Burkholderia cenocepacia AU 1054 4096773 YP_625428.1 CDS Bcen_5586 NC_008062.1 106741 107340 R PFAM: ThiJ/PfpI; KEGG: bur:Bcep18194_C7256 ThiJ/PfpI family protein; ThiJ/PfpI complement(106741..107340) Burkholderia cenocepacia AU 1054 4096774 YP_625429.1 CDS Bcen_5587 NC_008062.1 107750 108907 D KEGG: bte:BTH_I0078 hypothetical protein; hypothetical protein 107750..108907 Burkholderia cenocepacia AU 1054 4096775 YP_625430.1 CDS Bcen_5588 NC_008062.1 108967 109128 D KEGG: bps:BPSL0094 lipoprotein; lipoprotein 108967..109128 Burkholderia cenocepacia AU 1054 4096776 YP_625431.1 CDS Bcen_5589 NC_008062.1 109210 109683 R KEGG: rso:RS03923 hypothetical protein; hypothetical protein complement(109210..109683) Burkholderia cenocepacia AU 1054 4096777 YP_625432.1 CDS Bcen_5590 NC_008062.1 109686 110858 R PFAM: Chromate transporter; KEGG: rso:RSp0555 probable chromate transport transmembrane protein; chromate transporter complement(109686..110858) Burkholderia cenocepacia AU 1054 4096778 YP_625433.1 CDS Bcen_5591 NC_008062.1 110878 111840 R KEGG: rso:RSp0554 probable chromate resistance signal peptide protein; chromate resistance signal peptide protein complement(110878..111840) Burkholderia cenocepacia AU 1054 4096779 YP_625434.1 CDS Bcen_5592 NC_008062.1 112203 112532 D hypothetical protein 112203..112532 Burkholderia cenocepacia AU 1054 4096780 YP_625435.1 CDS Bcen_5593 NC_008062.1 112791 113123 D KEGG: bpm:BURPS1710b_1292 hypothetical protein; hypothetical protein 112791..113123 Burkholderia cenocepacia AU 1054 4096781 YP_625436.1 CDS Bcen_5594 NC_008062.1 113127 113381 D hypothetical protein 113127..113381 Burkholderia cenocepacia AU 1054 4096782 YP_625437.1 CDS rpsU NC_008062.1 113415 113627 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 113415..113627 Burkholderia cenocepacia AU 1054 4096783 YP_625438.1 CDS Bcen_5596 NC_008062.1 113717 114820 D PFAM: transposase, IS4; KEGG: gsu:GSU2597 ISGsu2, transposase; transposase, IS4 113717..114820 Burkholderia cenocepacia AU 1054 4096784 YP_625439.1 CDS Bcen_5597 NC_008062.1 115197 116474 R PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; KEGG: bpm:BURPS1710b_1253 signal transduction histidine kinase (contains HAMP domain); periplasmic sensor signal transduction histidine kinase complement(115197..116474) Burkholderia cenocepacia AU 1054 4096785 YP_625440.1 CDS Bcen_5598 NC_008062.1 116458 117207 R PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bur:Bcep18194_A5728 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(116458..117207) Burkholderia cenocepacia AU 1054 4096786 YP_625441.1 CDS Bcen_5599 NC_008062.1 117533 118789 D PFAM: secretion protein HlyD; KEGG: dvu:DVU2817 multidrug resistance protein; secretion protein HlyD 117533..118789 Burkholderia cenocepacia AU 1054 4096787 YP_625442.1 CDS Bcen_5600 NC_008062.1 118802 121999 D TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: acriflavin resistance protein; KEGG: bte:BTH_I0681 hydrophobe/amphiphile efflux family protein; hydrophobe/amphiphile efflux-1 HAE1 118802..121999 Burkholderia cenocepacia AU 1054 4096788 YP_625443.1 CDS Bcen_5601 NC_008062.1 121996 123423 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: pae:PA0427 outer membrane protein OprM precursor; RND efflux system, outer membrane lipoprotein, NodT 121996..123423 Burkholderia cenocepacia AU 1054 4096789 YP_625444.1 CDS Bcen_5602 NC_008062.1 123794 124528 D SMART: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_C7267 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein 123794..124528 Burkholderia cenocepacia AU 1054 4096790 YP_625445.1 CDS Bcen_5603 NC_008062.1 124582 125841 R PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: sco:SCO1054 aminotransferase; aminotransferase, class V complement(124582..125841) Burkholderia cenocepacia AU 1054 4096831 YP_625446.1 CDS Bcen_5604 NC_008062.1 125895 127223 R PFAM: sodium:dicarboxylate symporter; KEGG: pae:PA5479 proton-glutamate symporter; sodium:dicarboxylate symporter complement(125895..127223) Burkholderia cenocepacia AU 1054 4096832 YP_625447.1 CDS Bcen_5605 NC_008062.1 127400 128317 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bbr:BB3311 LysR-family transcriptional regulator; LysR family transcriptional regulator 127400..128317 Burkholderia cenocepacia AU 1054 4096833 YP_625448.1 CDS Bcen_5606 NC_008062.1 128628 129935 D PFAM: sodium:dicarboxylate symporter; KEGG: bur:Bcep18194_B0997 sodium/dicarboxylate symporter; sodium:dicarboxylate symporter 128628..129935 Burkholderia cenocepacia AU 1054 4096834 YP_625449.1 CDS Bcen_5607 NC_008062.1 129949 130890 D PFAM: extracellular solute-binding protein, family 3; KEGG: bja:bll0102 glutamate/aspartate periplasmic binding protein precursor; extracellular solute-binding protein 129949..130890 Burkholderia cenocepacia AU 1054 4096835 YP_625450.1 CDS Bcen_5608 NC_008062.1 130980 136874 R KEGG: bur:Bcep18194_C7351 excinuclease ABC, A subunit TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: ATPase; excinuclease ABC, A subunit complement(130980..136874) Burkholderia cenocepacia AU 1054 4096836 YP_625451.1 CDS Bcen_5609 NC_008062.1 137187 138389 R KEGG: ppu:PP3195 hypothetical protein; hypothetical protein complement(137187..138389) Burkholderia cenocepacia AU 1054 4096837 YP_625452.1 CDS Bcen_5610 NC_008062.1 138467 139183 R KEGG: bur:Bcep18194_C7459 transcriptional regulator, TetR family; hypothetical protein complement(138467..139183) Burkholderia cenocepacia AU 1054 4096838 YP_625453.1 CDS Bcen_5611 NC_008062.1 139374 140180 D PFAM: cyclase; KEGG: bur:Bcep18194_C7460 cyclase; cyclase 139374..140180 Burkholderia cenocepacia AU 1054 4096839 YP_625454.1 CDS Bcen_5612 NC_008062.1 140216 141538 D KEGG: bur:Bcep18194_C7461 fumarylacetoacetase TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetase 140216..141538 Burkholderia cenocepacia AU 1054 4096840 YP_625455.1 CDS Bcen_5613 NC_008062.1 141678 142769 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_C7462 outer membrane protein (porin); porin complement(141678..142769) Burkholderia cenocepacia AU 1054 4096841 YP_625456.1 CDS Bcen_5614 NC_008062.1 143039 143797 R KEGG: bur:Bcep18194_C7463 hypothetical protein; hypothetical protein complement(143039..143797) Burkholderia cenocepacia AU 1054 4096842 YP_625457.1 CDS Bcen_5615 NC_008062.1 143927 144529 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_C7464 transcriptional regulator, TetR family; TetR family transcriptional regulator 143927..144529 Burkholderia cenocepacia AU 1054 4096843 YP_625458.1 CDS Bcen_5616 NC_008062.1 144822 145052 R KEGG: bur:Bcep18194_C7365 hypothetical protein; hypothetical protein complement(144822..145052) Burkholderia cenocepacia AU 1054 4096844 YP_625459.1 CDS Bcen_5617 NC_008062.1 145211 145588 R KEGG: bur:Bcep18194_C7366 hypothetical protein; hypothetical protein complement(145211..145588) Burkholderia cenocepacia AU 1054 4096845 YP_625460.1 CDS Bcen_5618 NC_008062.1 145641 146303 R PFAM: OmpA/MotB; KEGG: bur:Bcep18194_C7373 outer membrane protein, OmpA/MotB family; OmpA/MotB complement(145641..146303) Burkholderia cenocepacia AU 1054 4096846 YP_625461.1 CDS Bcen_5619 NC_008062.1 146428 150843 R PFAM: YadA-like-like; Haemagluttinin motif; Hep_Hag; KEGG: bur:Bcep18194_C7374 YadA/haemagluttinin like protein; YadA-like complement(146428..150843) Burkholderia cenocepacia AU 1054 4096847 YP_625462.1 CDS Bcen_5620 NC_008062.1 150984 151349 D hypothetical protein 150984..151349 Burkholderia cenocepacia AU 1054 4096848 YP_625463.1 CDS Bcen_5621 NC_008062.1 152298 153131 D PFAM: helix-turn-helix, AraC type; response regulator receiver; KEGG: bur:Bcep18194_C7377 two component transcriptional regulator, AraC family; two component AraC family transcriptional regulator 152298..153131 Burkholderia cenocepacia AU 1054 4096849 YP_625464.1 CDS Bcen_5622 NC_008062.1 153124 155466 D PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; KEGG: bur:Bcep18194_C7378 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 153124..155466 Burkholderia cenocepacia AU 1054 4096676 YP_625465.1 CDS Bcen_5623 NC_008062.1 155507 155794 R hypothetical protein complement(155507..155794) Burkholderia cenocepacia AU 1054 4096677 YP_625466.1 CDS Bcen_5624 NC_008062.1 155828 156916 R membrane component of a sugar ABC transporter system; inner membrane ABC transporter permease protein YjfF complement(155828..156916) Burkholderia cenocepacia AU 1054 4096678 YP_625467.1 CDS Bcen_5625 NC_008062.1 156913 157956 R PFAM: inner-membrane translocator; KEGG: bte:BTH_I2344 ribose ABC transporter permease; inner-membrane translocator complement(156913..157956) Burkholderia cenocepacia AU 1054 4096679 YP_625468.1 CDS Bcen_5626 NC_008062.1 157953 159467 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bte:BTH_I2343 ATP binding protein of ABC transporter; ABC transporter related complement(157953..159467) Burkholderia cenocepacia AU 1054 4096680 YP_625469.1 CDS Bcen_5627 NC_008062.1 159528 160490 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_I2342 periplasmic ribose-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(159528..160490) Burkholderia cenocepacia AU 1054 4096681 YP_625470.1 CDS Bcen_5628 NC_008062.1 160772 161623 R PFAM: Pirin-like; KEGG: bur:Bcep18194_C7379 pirin-like; Pirin-like complement(160772..161623) Burkholderia cenocepacia AU 1054 4096682 YP_625471.1 CDS Bcen_5629 NC_008062.1 161658 162263 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bur:Bcep18194_C7380 (acyl-carrier protein) phosphodiesterase; (Acyl-carrier protein) phosphodiesterase complement(161658..162263) Burkholderia cenocepacia AU 1054 4096683 YP_625472.1 CDS Bcen_5630 NC_008062.1 162382 163305 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7382 transcriptional regulator, LysR family; LysR family transcriptional regulator 162382..163305 Burkholderia cenocepacia AU 1054 4096684 YP_625473.1 CDS Bcen_5631 NC_008062.1 163537 164565 D KEGG: pst:PSPTO2976 DNA topoisomerase, type I; DNA topoisomerase, type I 163537..164565 Burkholderia cenocepacia AU 1054 4096685 YP_625474.1 CDS Bcen_5632 NC_008062.1 164845 166314 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7406 major facilitator superfamily (MFS_1) transporter; general substrate transporter 164845..166314 Burkholderia cenocepacia AU 1054 4096686 YP_625475.1 CDS Bcen_5633 NC_008062.1 166361 167185 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C7407 alpha/beta hydrolase; alpha/beta hydrolase fold complement(166361..167185) Burkholderia cenocepacia AU 1054 4096687 YP_625476.1 CDS Bcen_5634 NC_008062.1 167339 168331 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7408 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(167339..168331) Burkholderia cenocepacia AU 1054 4096688 YP_625477.1 CDS Bcen_5635 NC_008062.1 168951 169802 R KEGG: bur:Bcep18194_C7409 hypothetical protein; hypothetical protein complement(168951..169802) Burkholderia cenocepacia AU 1054 4096689 YP_625478.1 CDS Bcen_5636 NC_008062.1 169841 170869 R PFAM: fatty acid desaturase; KEGG: bur:Bcep18194_C7410 fatty acid desaturase; fatty acid desaturase complement(169841..170869) Burkholderia cenocepacia AU 1054 4096690 YP_625479.1 CDS Bcen_5637 NC_008062.1 171170 172972 D PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C7411 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 171170..172972 Burkholderia cenocepacia AU 1054 4096691 YP_625480.1 CDS Bcen_5638 NC_008062.1 172969 173679 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_C7412 ABC efflux pump, ATPase subunit; ABC transporter related 172969..173679 Burkholderia cenocepacia AU 1054 4096692 YP_625481.1 CDS Bcen_5639 NC_008062.1 173705 174868 D PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_C7413 ABC efflux pump, inner membrane subunit; hypothetical protein 173705..174868 Burkholderia cenocepacia AU 1054 4096693 YP_625482.1 CDS Bcen_5640 NC_008062.1 174865 175617 D KEGG: bur:Bcep18194_C7414 hypothetical protein; hypothetical protein 174865..175617 Burkholderia cenocepacia AU 1054 4096694 YP_625483.1 CDS Bcen_5641 NC_008062.1 175607 176935 D KEGG: bur:Bcep18194_C7415 hypothetical protein; hypothetical protein 175607..176935 Burkholderia cenocepacia AU 1054 4096695 YP_625484.1 CDS Bcen_5642 NC_008062.1 176949 178034 D KEGG: bur:Bcep18194_C7416 hypothetical protein; hypothetical protein 176949..178034 Burkholderia cenocepacia AU 1054 4096581 YP_625485.1 CDS Bcen_5643 NC_008062.1 178093 178347 D PFAM: phosphopantetheine-binding; KEGG: bur:Bcep18194_C7417 acyl carrierprotein; phosphopantetheine-binding 178093..178347 Burkholderia cenocepacia AU 1054 4096582 YP_625486.1 CDS Bcen_5644 NC_008062.1 178355 179230 D KEGG: bur:Bcep18194_C7418 hypothetical protein; hypothetical protein 178355..179230 Burkholderia cenocepacia AU 1054 4096583 YP_625487.1 CDS Bcen_5645 NC_008062.1 179232 179861 D KEGG: bur:Bcep18194_C7419 hypothetical protein; hypothetical protein 179232..179861 Burkholderia cenocepacia AU 1054 4096584 YP_625488.1 CDS Bcen_5646 NC_008062.1 179863 180846 D KEGG: bur:Bcep18194_C7420 hypothetical protein; hypothetical protein 179863..180846 Burkholderia cenocepacia AU 1054 4096585 YP_625489.1 CDS Bcen_5647 NC_008062.1 180850 181833 D KEGG: bur:Bcep18194_C7421 hypothetical protein; hypothetical protein 180850..181833 Burkholderia cenocepacia AU 1054 4096586 YP_625490.1 CDS Bcen_5648 NC_008062.1 181823 182998 D PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bur:Bcep18194_C7422 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 181823..182998 Burkholderia cenocepacia AU 1054 4096587 YP_625491.1 CDS Bcen_5649 NC_008062.1 183015 184610 D PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C7423 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 183015..184610 Burkholderia cenocepacia AU 1054 4096588 YP_625492.1 CDS Bcen_5650 NC_008062.1 184607 185701 D KEGG: bur:Bcep18194_C7424 hypothetical protein; hypothetical protein 184607..185701 Burkholderia cenocepacia AU 1054 4096589 YP_625493.1 CDS Bcen_5651 NC_008062.1 185698 187551 D PFAM: acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_C7425 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase-like 185698..187551 Burkholderia cenocepacia AU 1054 4096590 YP_625494.1 CDS Bcen_5652 NC_008062.1 187553 188803 D KEGG: bur:Bcep18194_C7426 citrate synthase-like; citrate synthase-like 187553..188803 Burkholderia cenocepacia AU 1054 4096591 YP_625495.1 CDS Bcen_5653 NC_008062.1 188832 189494 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_C7427 UbiE/COQ5 methyltransferase; methyltransferase type 11 188832..189494 Burkholderia cenocepacia AU 1054 4096592 YP_625496.1 CDS Bcen_5654 NC_008062.1 189498 190571 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bur:Bcep18194_C7428 hypothetical protein; taurine catabolism dioxygenase TauD/TfdA 189498..190571 Burkholderia cenocepacia AU 1054 4096593 YP_625497.1 CDS Bcen_5655 NC_008062.1 190583 191596 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_C7429 ABC efflux pump, ATPase subunit; ABC transporter related 190583..191596 Burkholderia cenocepacia AU 1054 4096594 YP_625498.1 CDS Bcen_5656 NC_008062.1 191589 192668 D PFAM: ABC-2 type transporter; KEGG: bur:Bcep18194_C7430 ABC efflux pump, inner membrane subunit; ABC-2 type transporter 191589..192668 Burkholderia cenocepacia AU 1054 4096595 YP_625499.1 CDS Bcen_5657 NC_008062.1 192705 193247 D KEGG: bur:Bcep18194_C7431 hypothetical protein; hypothetical protein 192705..193247 Burkholderia cenocepacia AU 1054 4096596 YP_625500.1 CDS Bcen_5658 NC_008062.1 193250 194668 D PFAM: FAD linked oxidase-like; KEGG: bur:Bcep18194_C7432 FAD linked oxidase-like; FAD linked oxidase-like 193250..194668 Burkholderia cenocepacia AU 1054 4096597 YP_625501.1 CDS Bcen_5659 NC_008062.1 194668 194952 D KEGG: bur:Bcep18194_C7433 hypothetical protein; hypothetical protein 194668..194952 Burkholderia cenocepacia AU 1054 4096598 YP_625502.1 CDS Bcen_5660 NC_008062.1 194978 196105 R KEGG: bja:blr0368 hypothetical protein; 3-carboxymuconate cyclase-like complement(194978..196105) Burkholderia cenocepacia AU 1054 4096599 YP_625503.1 CDS Bcen_5661 NC_008062.1 196168 197520 R TIGRFAM: TRAP dicarboxylate transporter- DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bur:Bcep18194_C7434 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter- DctM subunit complement(196168..197520) Burkholderia cenocepacia AU 1054 4096791 YP_625504.1 CDS Bcen_5662 NC_008062.1 197525 198097 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: bur:Bcep18194_C7435 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ complement(197525..198097) Burkholderia cenocepacia AU 1054 4096792 YP_625505.1 CDS Bcen_5663 NC_008062.1 198094 199080 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bur:Bcep18194_C7436 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter, DctP subunit complement(198094..199080) Burkholderia cenocepacia AU 1054 4096793 YP_625506.1 CDS Bcen_5664 NC_008062.1 199663 201840 D PFAM: glycoside hydrolase, family 28; KEGG: rso:RSp0880 polygalacturonase precursor (pectinase) signal peptide protein; glycoside hydrolase family protein 199663..201840 Burkholderia cenocepacia AU 1054 4096794 YP_625507.1 CDS Bcen_5665 NC_008062.1 201931 202125 D hypothetical protein 201931..202125 Burkholderia cenocepacia AU 1054 4096795 YP_625508.1 CDS Bcen_5666 NC_008062.1 202161 203252 R SMART: regulatory protein, LuxR; KEGG: bur:Bcep18194_C7444 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(202161..203252) Burkholderia cenocepacia AU 1054 4096796 YP_625509.1 CDS Bcen_5667 NC_008062.1 203547 203798 R KEGG: bur:Bcep18194_C7446 hypothetical protein; hypothetical protein complement(203547..203798) Burkholderia cenocepacia AU 1054 4096797 YP_625510.1 CDS Bcen_5668 NC_008062.1 204274 205365 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility-like; KEGG: aci:ACIAD0849 dehydrogenase; dihydrokaempferol 4-reductase 204274..205365 Burkholderia cenocepacia AU 1054 4096798 YP_625511.1 CDS Bcen_5669 NC_008062.1 205362 206351 D PFAM: helix-turn-helix, AraC type; KEGG: xac:XAC0536 virulence regulating protein; AraC family transcriptional regulator 205362..206351 Burkholderia cenocepacia AU 1054 4096799 YP_625512.1 CDS Bcen_5670 NC_008062.1 206394 206882 R PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_C7448 endoribonuclease L-PSP; endoribonuclease L-PSP complement(206394..206882) Burkholderia cenocepacia AU 1054 4096800 YP_625513.1 CDS Bcen_5671 NC_008062.1 207110 207409 D PFAM: histone-like nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_C7449 histone-like nucleoid-structuring protein H-NS; histone-like nucleoid-structuring protein H-NS 207110..207409 Burkholderia cenocepacia AU 1054 4096801 YP_625514.1 CDS Bcen_5672 NC_008062.1 207582 207914 R PFAM: Cupin 2, conserved barrel; KEGG: bur:Bcep18194_C7450 hypothetical protein; cupin 2, barrel complement(207582..207914) Burkholderia cenocepacia AU 1054 4096802 YP_625515.1 CDS Bcen_5673 NC_008062.1 208368 209291 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7468 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(208368..209291) Burkholderia cenocepacia AU 1054 4096803 YP_625516.1 CDS Bcen_5674 NC_008062.1 209359 209976 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_C7469 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 209359..209976 Burkholderia cenocepacia AU 1054 4096804 YP_625517.1 CDS Bcen_5675 NC_008062.1 210040 210672 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bur:Bcep18194_C7470 acyl-carrier protein phosphodiesterase; (Acyl-carrier protein) phosphodiesterase complement(210040..210672) Burkholderia cenocepacia AU 1054 4096805 YP_625518.1 CDS Bcen_5676 NC_008062.1 210805 211683 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7471 transcriptional regulator, LysR family; LysR family transcriptional regulator 210805..211683 Burkholderia cenocepacia AU 1054 4096806 YP_625519.1 CDS Bcen_5677 NC_008062.1 211736 213211 R PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_C7472 aldehyde dehydrogenase; aldehyde dehydrogenase complement(211736..213211) Burkholderia cenocepacia AU 1054 4096807 YP_625520.1 CDS Bcen_5678 NC_008062.1 213311 213964 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_C7473 transcriptional regulator, TetR family; TetR family transcriptional regulator 213311..213964 Burkholderia cenocepacia AU 1054 4096808 YP_625521.1 CDS Bcen_5679 NC_008062.1 214022 214804 D PFAM: ThiJ/PfpI; KEGG: bur:Bcep18194_C7474 ThiJ/PfpI family protein; ThiJ/PfpI 214022..214804 Burkholderia cenocepacia AU 1054 4096809 YP_625522.1 CDS Bcen_5680 NC_008062.1 214801 215316 R PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_C7475 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(214801..215316) Burkholderia cenocepacia AU 1054 4096810 YP_625523.1 CDS Bcen_5681 NC_008062.1 215404 216654 R PFAM: Saccharopine dehydrogenase; KEGG: bur:Bcep18194_C7476 saccharopine dehydrogenase; saccharopine dehydrogenase complement(215404..216654) Burkholderia cenocepacia AU 1054 4097207 YP_625524.1 CDS Bcen_5682 NC_008062.1 216698 217615 R KEGG: bur:Bcep18194_C7477 hypothetical protein; hypothetical protein complement(216698..217615) Burkholderia cenocepacia AU 1054 4097208 YP_625525.1 CDS Bcen_5683 NC_008062.1 217779 218228 R PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_C7478 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(217779..218228) Burkholderia cenocepacia AU 1054 4097209 YP_625526.1 CDS Bcen_5684 NC_008062.1 218396 219226 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C7479 alpha/beta hydrolase; alpha/beta hydrolase fold 218396..219226 Burkholderia cenocepacia AU 1054 4097210 YP_625527.1 CDS Bcen_5685 NC_008062.1 219448 219855 D KEGG: bur:Bcep18194_C7498 hypothetical protein; hypothetical protein 219448..219855 Burkholderia cenocepacia AU 1054 4097211 YP_625528.1 CDS Bcen_5686 NC_008062.1 219865 221430 R PFAM: histidine kinase, HAMP region; chemotaxis sensory transducer; KEGG: bur:Bcep18194_C7507 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(219865..221430) Burkholderia cenocepacia AU 1054 4097212 YP_625529.1 CDS Bcen_5687 NC_008062.1 221621 221851 R KEGG: bur:Bcep18194_C7510 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(221621..221851) Burkholderia cenocepacia AU 1054 4097213 YP_625530.1 CDS Bcen_5688 NC_008062.1 221844 222689 R PFAM: beta-lactamase-like; KEGG: bur:Bcep18194_C7234 beta-lactamase-like; beta-lactamase-like complement(221844..222689) Burkholderia cenocepacia AU 1054 4097214 YP_625531.1 CDS Bcen_5689 NC_008062.1 222708 223034 R KEGG: bur:Bcep18194_C7233 hypothetical protein; hypothetical protein complement(222708..223034) Burkholderia cenocepacia AU 1054 4097215 YP_625532.1 CDS Bcen_5690 NC_008062.1 223027 223557 R KEGG: bur:Bcep18194_C7232 hypothetical protein; hypothetical protein complement(223027..223557) Burkholderia cenocepacia AU 1054 4097216 YP_625533.1 CDS Bcen_5691 NC_008062.1 223726 224619 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7231 transcriptional regulator, LysR family; LysR family transcriptional regulator 223726..224619 Burkholderia cenocepacia AU 1054 4097217 YP_625534.1 CDS Bcen_5692 NC_008062.1 224677 225582 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mlo:mlr1992 probable transcriptional regulator; LysR family transcriptional regulator complement(224677..225582) Burkholderia cenocepacia AU 1054 4097218 YP_625535.1 CDS Bcen_5693 NC_008062.1 225699 226289 D PFAM: flavodoxin/nitric oxide synthase; KEGG: atc:AGR_L_1309 tryptophan repressor binding protein XF1133; flavodoxin/nitric oxide synthase 225699..226289 Burkholderia cenocepacia AU 1054 4097219 YP_625536.1 CDS Bcen_5694 NC_008062.1 226364 227419 D PFAM: aldo/keto reductase; KEGG: atc:AGR_L_29 oxidoreductase protein; aldo/keto reductase 226364..227419 Burkholderia cenocepacia AU 1054 4097220 YP_625537.1 CDS Bcen_5695 NC_008062.1 227433 227627 R KEGG: sru:SRU_1212 NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase family protein complement(227433..227627) Burkholderia cenocepacia AU 1054 4097221 YP_625538.1 CDS Bcen_5696 NC_008062.1 227656 228507 R PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll4600 4-carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(227656..228507) Burkholderia cenocepacia AU 1054 4097222 YP_625539.1 CDS Bcen_5697 NC_008062.1 228730 229413 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_C7518 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(228730..229413) Burkholderia cenocepacia AU 1054 4097223 YP_625540.1 CDS Bcen_5698 NC_008062.1 229466 231529 D KEGG: bur:Bcep18194_C7519 terpene synthase/squalene cyclase TIGRFAM: Terpene synthase; Squalene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene cyclase 229466..231529 Burkholderia cenocepacia AU 1054 4097224 YP_625541.1 CDS Bcen_5699 NC_008062.1 231615 232529 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppu:PP4460 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(231615..232529) Burkholderia cenocepacia AU 1054 4097225 YP_625542.1 CDS Bcen_5700 NC_008062.1 232679 233803 D PFAM: FAD dependent oxidoreductase; KEGG: bja:bll7193 opine oxidase subunit B; FAD dependent oxidoreductase 232679..233803 Burkholderia cenocepacia AU 1054 4096850 YP_625543.1 CDS Bcen_5701 NC_008062.1 233796 234095 D KEGG: bbr:BB0993 hypothetical protein; hypothetical protein 233796..234095 Burkholderia cenocepacia AU 1054 4096851 YP_625544.1 CDS Bcen_5702 NC_008062.1 234092 235528 D PFAM: BFD-like [2Fe-2S]-binding region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbr:BB0992 probable pyridine nucleotide-disulphide oxidoreductase; BFD-like (2Fe-2S)-binding region 234092..235528 Burkholderia cenocepacia AU 1054 4096852 YP_625545.1 CDS Bcen_5703 NC_008062.1 235569 236351 D PFAM: extracellular solute-binding protein, family 3; KEGG: bte:BTH_II2131 amino acid ABC transporter, periplasmic amino acid-binding protein; extracellular solute-binding protein 235569..236351 Burkholderia cenocepacia AU 1054 4096853 YP_625546.1 CDS Bcen_5704 NC_008062.1 236644 237555 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pfo:Pfl_3524 transcriptional regulator, LysR family; LysR family transcriptional regulator 236644..237555 Burkholderia cenocepacia AU 1054 4096854 YP_625547.1 CDS Bcen_5705 NC_008062.1 237776 238192 R KEGG: bat:BAS4716 hypothetical protein; hypothetical protein complement(237776..238192) Burkholderia cenocepacia AU 1054 4096855 YP_625548.1 CDS Bcen_5706 NC_008062.1 238210 239229 R PFAM: aldo/keto reductase; KEGG: pfo:Pfl_3523 aldo/keto reductase; aldo/keto reductase complement(238210..239229) Burkholderia cenocepacia AU 1054 4096856 YP_625549.1 CDS Bcen_5707 NC_008062.1 239564 239905 D KEGG: hypothetical protein; hypothetical protein 239564..239905 Burkholderia cenocepacia AU 1054 4096857 YP_625550.1 CDS Bcen_5708 NC_008062.1 240109 241398 D PFAM: secretion protein HlyD; KEGG: bja:blr0996 HlyD family secretion protein; secretion protein HlyD 240109..241398 Burkholderia cenocepacia AU 1054 4096858 YP_625551.1 CDS Bcen_5709 NC_008062.1 241395 244586 D TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: acriflavin resistance protein; KEGG: bja:blr0997 AcrB/AcrD/AcrF family protein; hydrophobe/amphiphile efflux-1 HAE1 241395..244586 Burkholderia cenocepacia AU 1054 4096859 YP_625552.1 CDS Bcen_5710 NC_008062.1 244583 245977 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_1415 RND efflux system outer membrane lipoprotein NodT; RND efflux system, outer membrane lipoprotein, NodT 244583..245977 Burkholderia cenocepacia AU 1054 4096860 YP_625553.1 CDS Bcen_5711 NC_008062.1 246083 246985 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rso:RSc1152 probable transcription regulator protein; LysR family transcriptional regulator complement(246083..246985) Burkholderia cenocepacia AU 1054 4096861 YP_625554.1 CDS Bcen_5712 NC_008062.1 247192 248103 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA-like; Male sterility-like; KEGG: pfo:Pfl_0720 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(247192..248103) Burkholderia cenocepacia AU 1054 4096862 YP_625555.1 CDS ampC NC_008062.1 248447 249616 R PFAM: beta-lactamase; KEGG: bur:Bcep18194_C7532 beta-lactamase; beta-lactamase complement(248447..249616) Burkholderia cenocepacia AU 1054 4096863 YP_625556.1 CDS Bcen_5714 NC_008062.1 250241 251545 D KEGG: bur:Bcep18194_C7533 hypothetical protein; hypothetical protein 250241..251545 Burkholderia cenocepacia AU 1054 4096864 YP_625557.1 CDS Bcen_5715 NC_008062.1 251539 252321 D KEGG: bur:Bcep18194_C7534 hypothetical protein; hypothetical protein 251539..252321 Burkholderia cenocepacia AU 1054 4096865 YP_625558.1 CDS Bcen_5716 NC_008062.1 252318 254324 D PFAM: Sel1-like repeat; KEGG: bur:Bcep18194_C7535 hypothetical protein; Sel1 repeat-containing protein 252318..254324 Burkholderia cenocepacia AU 1054 4096866 YP_625559.1 CDS Bcen_5717 NC_008062.1 254371 255183 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C7536 alpha/beta hydrolase; alpha/beta hydrolase fold complement(254371..255183) Burkholderia cenocepacia AU 1054 4096867 YP_625560.1 CDS Bcen_5718 NC_008062.1 255254 255736 R KEGG: bur:Bcep18194_C7537 hypothetical protein; hypothetical protein complement(255254..255736) Burkholderia cenocepacia AU 1054 4096868 YP_625561.1 CDS Bcen_5719 NC_008062.1 256142 256276 D KEGG: bur:Bcep18194_C7538 hypothetical protein; hypothetical protein 256142..256276 Burkholderia cenocepacia AU 1054 4096869 YP_625562.1 CDS Bcen_5720 NC_008062.1 256417 259119 R TIGRFAM: alpha-1,2-mannosidase, ; PFAM: glycosyl hydrolase 92; KEGG: bur:Bcep18194_C7541 alpha-1,2-mannosidase; alpha-1,2-mannosidase complement(256417..259119) Burkholderia cenocepacia AU 1054 4096330 YP_625563.1 CDS Bcen_5721 NC_008062.1 259539 260726 R KEGG: bur:Bcep18194_C7544 hypothetical protein; hypothetical protein complement(259539..260726) Burkholderia cenocepacia AU 1054 4096331 YP_625564.1 CDS Bcen_5722 NC_008062.1 260864 262075 R PFAM: Uncharacterised conserved protein UCP012702; MlrC-like; KEGG: bur:Bcep18194_C7545 uncharacterized conserved protein UCP012702; MlrC-like complement(260864..262075) Burkholderia cenocepacia AU 1054 4096332 YP_625565.1 CDS Bcen_5723 NC_008062.1 262083 263654 R KEGG: bbr:BB2648 N-carbamoyl-L-amino acid amidohydrolase TIGRFAM: Amidase, hydantoinase/carbamoylase; PFAM: peptidase M20; peptidase dimerisation; amidase, hydantoinase/carbamoylase complement(262083..263654) Burkholderia cenocepacia AU 1054 4096333 YP_625566.1 CDS Bcen_5724 NC_008062.1 263689 264390 R PFAM: ABC transporter related; SMART: ATPase; KEGG: pfl:PFL_3678 branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter related complement(263689..264390) Burkholderia cenocepacia AU 1054 4096334 YP_625567.1 CDS Bcen_5725 NC_008062.1 264387 265154 R PFAM: ABC transporter related; SMART: ATPase; KEGG: ppu:PP0616 branched-chain amino acid ABC transporter, ATP binding protein; ABC transporter related complement(264387..265154) Burkholderia cenocepacia AU 1054 4096335 YP_625568.1 CDS Bcen_5726 NC_008062.1 265151 266194 R PFAM: inner-membrane translocator; KEGG: ppu:PP0617 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator complement(265151..266194) Burkholderia cenocepacia AU 1054 4096336 YP_625569.1 CDS Bcen_5727 NC_008062.1 266191 267117 R PFAM: inner-membrane translocator; KEGG: pfl:PFL_3675 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator complement(266191..267117) Burkholderia cenocepacia AU 1054 4096337 YP_625570.1 CDS Bcen_5728 NC_008062.1 267122 268345 R TIGRFAM: Twin-arginine translocation pathway signal; KEGG: ppu:PP0619 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein; twin-arginine translocation pathway signal complement(267122..268345) Burkholderia cenocepacia AU 1054 4096338 YP_625571.1 CDS Bcen_5729 NC_008062.1 268560 269417 D PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: ppu:PP0620 transcriptional regulator, GntR family; GntR-like 268560..269417 Burkholderia cenocepacia AU 1054 4096339 YP_625572.1 CDS Bcen_5730 NC_008062.1 269548 270987 R PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_C7546 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase complement(269548..270987) Burkholderia cenocepacia AU 1054 4096340 YP_625573.1 CDS Bcen_5731 NC_008062.1 271016 272413 R PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_C7547 aminotransferase class-III; hypothetical protein complement(271016..272413) Burkholderia cenocepacia AU 1054 4096341 YP_625574.1 CDS Bcen_5732 NC_008062.1 272465 273853 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7548 amino acid transporter; amino acid permease-associated region complement(272465..273853) Burkholderia cenocepacia AU 1054 4096342 YP_625575.1 CDS Bcen_5733 NC_008062.1 274030 275199 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_C7549 transcriptional regulator, AraC family; AraC family transcriptional regulator 274030..275199 Burkholderia cenocepacia AU 1054 4096343 YP_625576.1 CDS Bcen_5734 NC_008062.1 275318 275671 D hypothetical protein 275318..275671 Burkholderia cenocepacia AU 1054 4096344 YP_625577.1 CDS Bcen_5735 NC_008062.1 275862 276578 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_C7550 ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 275862..276578 Burkholderia cenocepacia AU 1054 4096345 YP_625578.1 CDS Bcen_5736 NC_008062.1 276575 277486 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bur:Bcep18194_C7551 ABC glycine betaine/choline-binding transporter, periplasmic ligand binding protein; substrate-binding region of ABC-type glycine betaine transport system 276575..277486 Burkholderia cenocepacia AU 1054 4096346 YP_625579.1 CDS Bcen_5737 NC_008062.1 277498 278151 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_C7552 ABC glycinebetaine/carnitine/choline transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 277498..278151 Burkholderia cenocepacia AU 1054 4096347 YP_625580.1 CDS Bcen_5739 NC_008062.1 279480 279857 R KEGG: bur:Bcep18194_C7561 hypothetical protein; hypothetical protein complement(279480..279857) Burkholderia cenocepacia AU 1054 4096368 YP_625581.1 CDS Bcen_5740 NC_008062.1 280144 281124 D PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: bur:Bcep18194_C7562 transcriptional regulator, MarR family with acetyltransferase activity; MarR family transcriptional regulator 280144..281124 Burkholderia cenocepacia AU 1054 4096369 YP_625582.1 CDS Bcen_5741 NC_008062.1 281221 281826 R KEGG: bur:Bcep18194_C7577 Rossmann fold nucleotide-binding protein-like; Rossmann fold nucleotide-binding protein-like complement(281221..281826) Burkholderia cenocepacia AU 1054 4096370 YP_625583.1 CDS Bcen_5742 NC_008062.1 281823 283070 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7578 major facilitator superfamily, (MFS_1) family; major facilitator transporter complement(281823..283070) Burkholderia cenocepacia AU 1054 4096371 YP_625584.1 CDS Bcen_5743 NC_008062.1 283357 283686 R PFAM: histone-like nucleoid-structuring protein H-NS; KEGG: bur:Bcep18194_C7579 histone-like nucleoid-structuring protein H-NS; histone-like nucleoid-structuring protein H-NS complement(283357..283686) Burkholderia cenocepacia AU 1054 4096372 YP_625585.1 CDS Bcen_5744 NC_008062.1 284006 285355 R KEGG: bur:Bcep18194_C7580 hypothetical protein; hypothetical protein complement(284006..285355) Burkholderia cenocepacia AU 1054 4096373 YP_625586.1 CDS Bcen_5745 NC_008062.1 285608 286180 R KEGG: bur:Bcep18194_C7581 hypothetical protein; hypothetical protein complement(285608..286180) Burkholderia cenocepacia AU 1054 4096374 YP_625587.1 CDS Bcen_5746 NC_008062.1 286403 287158 R TIGRFAM: Histidine utilization repressor; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated; KEGG: bur:Bcep18194_B2386 transcriptional regulator, histidine utilization repressor, GntR family; histidine utilization repressor complement(286403..287158) Burkholderia cenocepacia AU 1054 4096375 YP_625588.1 CDS Bcen_5747 NC_008062.1 287209 288702 R PFAM: phenylalanine/histidine ammonia-lyase; KEGG: sme:SMc00669 histidine ammonia-lyase protein; phenylalanine/histidine ammonia-lyase complement(287209..288702) Burkholderia cenocepacia AU 1054 4096376 YP_625589.1 CDS Bcen_5748 NC_008062.1 288710 289501 R PFAM: ABC transporter related; SMART: ATPase; KEGG: eca:ECA4084 octopine permease ATP-binding protein P; ABC transporter related complement(288710..289501) Burkholderia cenocepacia AU 1054 4096377 YP_625590.1 CDS Bcen_5749 NC_008062.1 289529 290275 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4083 octopine transport system permease protein; amino acid ABC transporter permease complement(289529..290275) Burkholderia cenocepacia AU 1054 4096378 YP_625591.1 CDS Bcen_5750 NC_008062.1 290288 291010 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll6986 ABC transporter, permease protein; amino acid ABC transporter permease complement(290288..291010) Burkholderia cenocepacia AU 1054 4096379 YP_625592.1 CDS Bcen_5751 NC_008062.1 291111 292001 R PFAM: extracellular solute-binding protein, family 3; KEGG: mlo:mll6987 ABC transporter, periplasmic binding-protein; extracellular solute-binding protein complement(291111..292001) Burkholderia cenocepacia AU 1054 4096380 YP_625593.1 CDS Bcen_5752 NC_008062.1 292492 293457 R PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: bur:Bcep18194_C7602 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(292492..293457) Burkholderia cenocepacia AU 1054 4096381 YP_625594.1 CDS Bcen_5753 NC_008062.1 293766 294179 R PFAM: DoxX; KEGG: bur:Bcep18194_C7619 DoxX; DoxX complement(293766..294179) Burkholderia cenocepacia AU 1054 4096382 YP_625595.1 CDS Bcen_5754 NC_008062.1 294770 296995 D SMART: LamG-like jellyroll fold; KEGG: rso:RS01652 transmembrane protein; LamG-like jellyroll fold 294770..296995 Burkholderia cenocepacia AU 1054 4096383 YP_625596.1 CDS Bcen_5755 NC_008062.1 297217 298059 R PFAM: formate/nitrite transporter; KEGG: bja:bll2801 probable potential formate transporter; formate/nitrite transporter complement(297217..298059) Burkholderia cenocepacia AU 1054 4096384 YP_625597.1 CDS Bcen_5756 NC_008062.1 298388 299743 R PFAM: ANTAR; Nitrate and nitrite sensing; KEGG: eca:ECA2995 nitrate-and nitrite-responsive positive regulator; response regulator receiver/ANTAR domain-containing protein complement(298388..299743) Burkholderia cenocepacia AU 1054 4096385 YP_625598.1 CDS Bcen_5757 NC_008062.1 300292 301806 D PFAM: flagellar hook-associated protein 2-like; flagellar hook-associated 2-like; flagellin hook IN; KEGG: bur:Bcep18194_C7620 flagellar hook-associated protein 2; flagellar hook-associated 2-like 300292..301806 Burkholderia cenocepacia AU 1054 4096386 YP_625599.1 CDS Bcen_5758 NC_008062.1 301934 302581 R KEGG: bte:BTH_II2292 hypothetical protein; hypothetical protein complement(301934..302581) Burkholderia cenocepacia AU 1054 4096387 YP_625600.1 CDS Bcen_5759 NC_008062.1 303000 303947 R PFAM: dihydrodipicolinate synthetase; KEGG: bur:Bcep18194_C7621 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase complement(303000..303947) Burkholderia cenocepacia AU 1054 4096408 YP_625601.1 CDS Bcen_5760 NC_008062.1 303991 305310 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7622 major facilitator superfamily, (MFS_1) family; major facilitator transporter complement(303991..305310) Burkholderia cenocepacia AU 1054 4096409 YP_625602.1 CDS Bcen_5761 NC_008062.1 305371 306297 R TIGRFAM: Ribokinase; PFAM: PfkB; KEGG: bur:Bcep18194_C7623 ribokinase; ribokinase complement(305371..306297) Burkholderia cenocepacia AU 1054 4096410 YP_625603.1 CDS Bcen_5762 NC_008062.1 306539 307636 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_C7624 transcriptional regulator, LacI family; LacI family transcription regulator 306539..307636 Burkholderia cenocepacia AU 1054 4096411 YP_625604.1 CDS Bcen_5763 NC_008062.1 307732 308856 R PFAM: filamentation induced by cAMP protein Fic; KEGG: bur:Bcep18194_C7631 filamentation induced by cAMP protein, Fic; filamentation induced by cAMP protein Fic complement(307732..308856) Burkholderia cenocepacia AU 1054 4096412 YP_625605.1 CDS Bcen_5764 NC_008062.1 308947 309864 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7632 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(308947..309864) Burkholderia cenocepacia AU 1054 4096413 YP_625606.1 CDS Bcen_5765 NC_008062.1 309994 310719 D PFAM: Pirin-like; Cupin 2, conserved barrel; KEGG: bur:Bcep18194_C7633 pirin-like protein; Pirin-like 309994..310719 Burkholderia cenocepacia AU 1054 4096414 YP_625607.1 CDS Bcen_5766 NC_008062.1 310782 311384 D stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 310782..311384 Burkholderia cenocepacia AU 1054 4096415 YP_625608.1 CDS Bcen_5767 NC_008062.1 311490 311795 R KEGG: bur:Bcep18194_C7635 hypothetical protein; hypothetical protein complement(311490..311795) Burkholderia cenocepacia AU 1054 4096416 YP_625609.1 CDS Bcen_5769 NC_008062.1 312753 313124 R PFAM: LrgA; KEGG: bur:Bcep18194_C7637 LrgA; LrgA complement(312753..313124) Burkholderia cenocepacia AU 1054 4096418 YP_625610.1 CDS Bcen_5770 NC_008062.1 313367 314401 R PFAM: Alpha/beta hydrolase fold-3; KEGG: bur:Bcep18194_C7669 esterase/lipase/thioesterase; Alpha/beta hydrolase fold-3 complement(313367..314401) Burkholderia cenocepacia AU 1054 4096419 YP_625611.1 CDS Bcen_5771 NC_008062.1 314459 314884 R PFAM: OsmC-like protein; KEGG: bur:Bcep18194_C7670 OsmC-like protein; OsmC-like protein complement(314459..314884) Burkholderia cenocepacia AU 1054 4096420 YP_625612.1 CDS Bcen_5772 NC_008062.1 315109 315675 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_C7671 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(315109..315675) Burkholderia cenocepacia AU 1054 4096421 YP_625613.1 CDS Bcen_5773 NC_008062.1 315814 316410 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_C7672 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(315814..316410) Burkholderia cenocepacia AU 1054 4096422 YP_625614.1 CDS Bcen_5774 NC_008062.1 316558 317577 D KEGG: bur:Bcep18194_C7673 hypothetical protein; hypothetical protein 316558..317577 Burkholderia cenocepacia AU 1054 4096423 YP_625615.1 CDS Bcen_5775 NC_008062.1 317668 319521 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_C7674 ABC efflux pump, ATPase subunit; ABC transporter related 317668..319521 Burkholderia cenocepacia AU 1054 4096424 YP_625616.1 CDS Bcen_5776 NC_008062.1 319698 320870 D PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_C7685 outer membrane protein (porin); porin 319698..320870 Burkholderia cenocepacia AU 1054 4096425 YP_625617.1 CDS Bcen_5777 NC_008062.1 320973 321617 D PFAM: glutathione S-transferase-like; KEGG: bur:Bcep18194_C7686 glutathione S-transferase-like; glutathione S-transferase-like 320973..321617 Burkholderia cenocepacia AU 1054 4096426 YP_625618.1 CDS Bcen_5778 NC_008062.1 321777 322937 D KEGG: rru:Rru_A3708 hypothetical protein; hypothetical protein 321777..322937 Burkholderia cenocepacia AU 1054 4096446 YP_625619.1 CDS Bcen_5779 NC_008062.1 322973 323440 R KEGG: bur:Bcep18194_C7688 hypothetical protein; hypothetical protein complement(322973..323440) Burkholderia cenocepacia AU 1054 4096447 YP_625620.1 CDS Bcen_5780 NC_008062.1 323498 324166 R KEGG: bur:Bcep18194_C7689 hypothetical protein; hypothetical protein complement(323498..324166) Burkholderia cenocepacia AU 1054 4096448 YP_625621.1 CDS Bcen_5781 NC_008062.1 324374 325351 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7690 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(324374..325351) Burkholderia cenocepacia AU 1054 4096449 YP_625622.1 CDS Bcen_5782 NC_008062.1 325409 326308 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_C7691 protein of unknown function DUF6, transmembrane; hypothetical protein 325409..326308 Burkholderia cenocepacia AU 1054 4096450 YP_625623.1 CDS Bcen_5783 NC_008062.1 326928 328082 D PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_C7692 ABC branched-chain amino acid family transporter, periplasmic ligand binding protein; extracellular ligand-binding receptor 326928..328082 Burkholderia cenocepacia AU 1054 4096451 YP_625624.1 CDS Bcen_5784 NC_008062.1 328170 328472 D KEGG: bur:Bcep18194_C7693 hypothetical protein; hypothetical protein 328170..328472 Burkholderia cenocepacia AU 1054 4096452 YP_625625.1 CDS Bcen_5785 NC_008062.1 328575 331631 R PFAM: FAD linked oxidase-like; KEGG: bur:Bcep18194_C7704 FAD linked oxidase; FAD linked oxidase-like complement(328575..331631) Burkholderia cenocepacia AU 1054 4096453 YP_625626.1 CDS Bcen_5786 NC_008062.1 331683 332675 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7705 transcriptional regulator, LysR family; LysR family transcriptional regulator 331683..332675 Burkholderia cenocepacia AU 1054 4096454 YP_625627.1 CDS Bcen_5787 NC_008062.1 332698 333546 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C7706 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(332698..333546) Burkholderia cenocepacia AU 1054 4096455 YP_625628.1 CDS Bcen_5788 NC_008062.1 333658 334305 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bur:Bcep18194_C7707 lysine exporter family protein (LysE/YggA); lysine exporter protein LysE/YggA 333658..334305 Burkholderia cenocepacia AU 1054 4096456 YP_625629.1 CDS Bcen_5789 NC_008062.1 334363 335466 R PFAM: luciferase-like; KEGG: bur:Bcep18194_C7713 flavin-dependent oxidoreductase; luciferase-like complement(334363..335466) Burkholderia cenocepacia AU 1054 4096457 YP_625630.1 CDS Bcen_5790 NC_008062.1 335504 336064 R PFAM: NADPH-dependent FMN reductase; KEGG: bur:Bcep18194_C7714 FMN reductase; FMN reductase complement(335504..336064) Burkholderia cenocepacia AU 1054 4096458 YP_625631.1 CDS Bcen_5791 NC_008062.1 336518 337645 D PFAM: sigma-54 factor, interaction region; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; KEGG: bur:Bcep18194_C7716 sigma54 specific transcriptional regulator with PAS sensor, fis family; sigma-54 dependent trancsriptional regulator 336518..337645 Burkholderia cenocepacia AU 1054 4096459 YP_625632.1 CDS Bcen_5792 NC_008062.1 337898 339607 D in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 337898..339607 Burkholderia cenocepacia AU 1054 4096460 YP_625633.1 CDS Bcen_5793 NC_008062.1 339627 339914 R PFAM: protein of unknown function DUF1330; KEGG: bur:Bcep18194_C7348 protein of unknown function DUF1330; hypothetical protein complement(339627..339914) Burkholderia cenocepacia AU 1054 4096461 YP_625634.1 CDS Bcen_5794 NC_008062.1 340178 341563 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ppu:PP4433 amino acid MFS transporter; general substrate transporter 340178..341563 Burkholderia cenocepacia AU 1054 4096462 YP_625635.1 CDS Bcen_5795 NC_008062.1 341964 343307 R PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: bur:Bcep18194_C7710 transcriptional regulator, GntR family with aminotransferase activity; GntR family transcriptional regulator complement(341964..343307) Burkholderia cenocepacia AU 1054 4096463 YP_625636.1 CDS Bcen_5796 NC_008062.1 343610 344392 D PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_C7709 protein of unknown function DUF81; hypothetical protein 343610..344392 Burkholderia cenocepacia AU 1054 4096464 YP_625637.1 CDS Bcen_5798 NC_008062.1 344816 345748 D PFAM: beta-lactamase-like; KEGG: bur:Bcep18194_B2842 beta-lactamase-like; beta-lactamase-like 344816..345748 Burkholderia cenocepacia AU 1054 4096657 YP_625638.1 CDS Bcen_5799 NC_008062.1 345889 347283 R PFAM: aminotransferase class-III; KEGG: sil:SPO1136 aminotransferase, class III; hypothetical protein complement(345889..347283) Burkholderia cenocepacia AU 1054 4096658 YP_625639.1 CDS Bcen_5800 NC_008062.1 347304 348782 R KEGG: hypothetical protein; succinate-semialdehyde dehydrogenase (NAD(P)+) complement(347304..348782) Burkholderia cenocepacia AU 1054 4096659 YP_625640.1 CDS Bcen_5801 NC_008062.1 348904 349374 R PFAM: regulatory proteins, AsnC/Lrp; KEGG: mlo:mll7129 transcriptional regulator; AsnC family transcriptional regulator complement(348904..349374) Burkholderia cenocepacia AU 1054 4096660 YP_625641.1 CDS Bcen_5802 NC_008062.1 349388 350416 R PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: ppu:PP4423 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase complement(349388..350416) Burkholderia cenocepacia AU 1054 4096661 YP_625642.1 CDS Bcen_5803 NC_008062.1 350421 351629 R PFAM: peptidase M24; KEGG: ppu:PP4432 peptidase, M24 family protein; peptidase M24 complement(350421..351629) Burkholderia cenocepacia AU 1054 4096662 YP_625643.1 CDS Bcen_5804 NC_008062.1 351640 352644 R cyclodeaminase; ectoine utilization protein EutC complement(351640..352644) Burkholderia cenocepacia AU 1054 4096663 YP_625644.1 CDS eutB NC_008062.1 352646 353617 R catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization; threonine dehydratase complement(352646..353617) Burkholderia cenocepacia AU 1054 4096664 YP_625645.1 CDS Bcen_5806 NC_008062.1 353725 355137 R PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: ppu:PP4429 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(353725..355137) Burkholderia cenocepacia AU 1054 4096665 YP_625646.1 CDS Bcen_5807 NC_008062.1 355317 356120 R PFAM: HpcH/HpaI aldolase; KEGG: bbr:BB0353 hypothetical protein; citrate lyase complement(355317..356120) Burkholderia cenocepacia AU 1054 4096666 YP_625647.1 CDS Bcen_5808 NC_008062.1 356117 357508 R PFAM: MmgE/PrpD; KEGG: bbr:BB2960 hypothetical protein; MmgE/PrpD complement(356117..357508) Burkholderia cenocepacia AU 1054 4096667 YP_625648.1 CDS Bcen_5809 NC_008062.1 357528 358706 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pae:PA0882 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F complement(357528..358706) Burkholderia cenocepacia AU 1054 4096668 YP_625649.1 CDS Bcen_5810 NC_008062.1 358719 359924 R PFAM: acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like; KEGG: stm:STM0857 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase-like complement(358719..359924) Burkholderia cenocepacia AU 1054 4096669 YP_625650.1 CDS Bcen_5811 NC_008062.1 359921 360781 R KEGG: bur:Bcep18194_C7720 hypothetical protein; hypothetical protein complement(359921..360781) Burkholderia cenocepacia AU 1054 4096670 YP_625651.1 CDS Bcen_5812 NC_008062.1 361103 361582 D PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_C7721 transcriptional regulator, MarR family; MarR family transcriptional regulator 361103..361582 Burkholderia cenocepacia AU 1054 4096671 YP_625652.1 CDS Bcen_5813 NC_008062.1 361579 363702 D PFAM: Fusaric acid resistance protein conserved region; KEGG: bur:Bcep18194_C7722 fusaric acid resistance protein; fusaric acid resistance protein region 361579..363702 Burkholderia cenocepacia AU 1054 4096672 YP_625653.1 CDS Bcen_5814 NC_008062.1 363737 363949 D PFAM: protein of unknown function DUF1656; KEGG: bur:Bcep18194_C7723 protein of unknown function DUF1656; hypothetical protein 363737..363949 Burkholderia cenocepacia AU 1054 4096673 YP_625654.1 CDS Bcen_5816 NC_008062.1 366591 367016 D TIGRFAM: molybdenum-pterin binding domain; PFAM: TOBE; KEGG: bur:Bcep18194_C7726 molybdenum-pterin binding protein; molybdenum-pterin binding domain-containing protein 366591..367016 Burkholderia cenocepacia AU 1054 4096675 YP_625655.1 CDS Bcen_5817 NC_008062.1 367092 367679 D KEGG: bur:Bcep18194_C7727 hypothetical protein; hypothetical protein 367092..367679 Burkholderia cenocepacia AU 1054 4096811 YP_625656.1 CDS Bcen_5818 NC_008062.1 367753 368046 D hypothetical protein 367753..368046 Burkholderia cenocepacia AU 1054 4096812 YP_625657.1 CDS Bcen_5819 NC_008062.1 368028 369089 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_C7729 protein of unknown function DUF6, transmembrane; hypothetical protein complement(368028..369089) Burkholderia cenocepacia AU 1054 4096813 YP_625658.1 CDS Bcen_5820 NC_008062.1 369576 370247 R PFAM: ProQ activator of osmoprotectant transporter ProP; KEGG: bur:Bcep18194_C7730 ProQ, activator of osmoprotectant transporter ProP; ProQ activator of osmoprotectant transporter ProP complement(369576..370247) Burkholderia cenocepacia AU 1054 4096814 YP_625659.1 CDS Bcen_5821 NC_008062.1 370902 371486 D KEGG: bur:Bcep18194_C7732 hypothetical protein; hypothetical protein 370902..371486 Burkholderia cenocepacia AU 1054 4096815 YP_625660.1 CDS Bcen_5822 NC_008062.1 371604 372095 R PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: bur:Bcep18194_C7733 oxidoreductase; flavodoxin/nitric oxide synthase complement(371604..372095) Burkholderia cenocepacia AU 1054 4096816 YP_625661.1 CDS Bcen_5823 NC_008062.1 372299 372952 R PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_C7734 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(372299..372952) Burkholderia cenocepacia AU 1054 4096817 YP_625662.1 CDS Bcen_5824 NC_008062.1 373036 374160 D KEGG: bur:Bcep18194_C7735 Zn-dependent hydrolases of the beta-lactamase fold-like; Zn-dependent hydrolases of the beta-lactamase fold-like 373036..374160 Burkholderia cenocepacia AU 1054 4096818 YP_625663.1 CDS Bcen_5825 NC_008062.1 374288 375304 D PFAM: helix-turn-helix, AraC type; AraC-type transcriptional regulator-like; KEGG: bur:Bcep18194_C7736 transcriptional regulator, AraC family; AraC family transcriptional regulator 374288..375304 Burkholderia cenocepacia AU 1054 4096819 YP_625664.1 CDS Bcen_5826 NC_008062.1 377091 377786 D PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bur:Bcep18194_C7737 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 377091..377786 Burkholderia cenocepacia AU 1054 4096820 YP_625665.1 CDS Bcen_5827 NC_008062.1 377779 378810 D TIGRFAM: parB-like partition proteins; PFAM: ParB-like nuclease; KEGG: bur:Bcep18194_C7738 ParB-like partition protein; parB-like partition proteins 377779..378810 Burkholderia cenocepacia AU 1054 4096821 YP_625666.1 CDS Bcen_5828 NC_008062.1 378906 380222 R KEGG: bur:Bcep18194_C7739 hypothetical protein; hypothetical protein complement(378906..380222) Burkholderia cenocepacia AU 1054 4096822 YP_625667.1 CDS Bcen_5829 NC_008062.1 382175 382423 D hypothetical protein 382175..382423 Burkholderia cenocepacia AU 1054 4096823 YP_625668.1 CDS Bcen_5830 NC_008062.1 382614 382976 D KEGG: bur:Bcep18194_C6524 hypothetical protein; hypothetical protein 382614..382976 Burkholderia cenocepacia AU 1054 4096824 YP_625669.1 CDS Bcen_5831 NC_008062.1 383146 384036 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C6525 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(383146..384036) Burkholderia cenocepacia AU 1054 4096825 YP_625670.1 CDS Bcen_5832 NC_008062.1 384177 385475 D PFAM: adenylosuccinate synthetase; KEGG: bur:Bcep18194_C6526 adenylosuccinate synthase; adenylosuccinate synthase 384177..385475 Burkholderia cenocepacia AU 1054 4096826 YP_625671.1 CDS Bcen_5833 NC_008062.1 385776 386726 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C6527 transcriptional regulator, LysR family; LysR family transcriptional regulator 385776..386726 Burkholderia cenocepacia AU 1054 4096827 YP_625672.1 CDS Bcen_5834 NC_008062.1 386999 387970 D TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_C6528 ABC transporter, substrate-binding protein, aliphatic sulphonates; ABC transporter, substrate-binding protein, aliphatic sulphonates 386999..387970 Burkholderia cenocepacia AU 1054 4096828 YP_625673.1 CDS Bcen_5835 NC_008062.1 388032 389012 R PFAM: helix-turn-helix, AraC type; AraC-type transcriptional regulator-like; KEGG: bur:Bcep18194_C6605 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(388032..389012) Burkholderia cenocepacia AU 1054 4096829 YP_625674.1 CDS Bcen_5836 NC_008062.1 389610 390491 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C6606 transcriptional regulator, LysR family; LysR family transcriptional regulator 389610..390491 Burkholderia cenocepacia AU 1054 4096830 YP_625675.1 CDS Bcen_5837 NC_008062.1 390717 391955 D PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_C6607 secretion protein, HlyD family; secretion protein HlyD 390717..391955 Burkholderia cenocepacia AU 1054 4096562 YP_625676.1 CDS Bcen_5838 NC_008062.1 391971 395162 D TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_C6608 hydrophobe/amphiphile efflux-1 pump, HAE1; hydrophobe/amphiphile efflux-1 HAE1 391971..395162 Burkholderia cenocepacia AU 1054 4096563 YP_625677.1 CDS Bcen_5839 NC_008062.1 395165 396691 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A5938 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT 395165..396691 Burkholderia cenocepacia AU 1054 4096564 YP_625678.1 CDS Bcen_5840 NC_008062.1 396798 397511 R PFAM: dienelactone hydrolase; KEGG: bur:Bcep18194_C6610 carboxymethylenebutenolidase; carboxymethylenebutenolidase complement(396798..397511) Burkholderia cenocepacia AU 1054 4096565 YP_625679.1 CDS Bcen_5841 NC_008062.1 397788 398099 R KEGG: bur:Bcep18194_C6611 hypothetical protein; hypothetical protein complement(397788..398099) Burkholderia cenocepacia AU 1054 4096566 YP_625680.1 CDS Bcen_5842 NC_008062.1 398388 399353 R PFAM: helix-turn-helix, AraC type; ThiJ/PfpI; KEGG: bur:Bcep18194_C6612 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(398388..399353) Burkholderia cenocepacia AU 1054 4096567 YP_625681.1 CDS Bcen_5843 NC_008062.1 399522 400163 D PFAM: metal-dependent phosphohydrolase, HD subdomain; KEGG: bur:Bcep18194_C6613 metal-dependent phosphohydrolase; metal dependent phosphohydrolase 399522..400163 Burkholderia cenocepacia AU 1054 4096568 YP_625682.1 CDS Bcen_5844 NC_008062.1 400234 400500 D hypothetical protein 400234..400500 Burkholderia cenocepacia AU 1054 4096569 YP_625683.1 CDS Bcen_5845 NC_008062.1 400826 401281 D TIGRFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_C6616 hypothetical protein; hypothetical protein 400826..401281 Burkholderia cenocepacia AU 1054 4096570 YP_625684.1 CDS Bcen_5846 NC_008062.1 401278 401757 D KEGG: bur:Bcep18194_C6617 hypothetical protein; hypothetical protein 401278..401757 Burkholderia cenocepacia AU 1054 4096571 YP_625685.1 CDS Bcen_5847 NC_008062.1 401805 402740 R PFAM: phage integrase; KEGG: bur:Bcep18194_C6618 phage integrase; phage integrase complement(401805..402740) Burkholderia cenocepacia AU 1054 4096572 YP_625686.1 CDS Bcen_5848 NC_008062.1 402820 403332 R KEGG: bur:Bcep18194_C6619 small integral membrane protein; small integral membrane protein complement(402820..403332) Burkholderia cenocepacia AU 1054 4096573 YP_625687.1 CDS Bcen_5849 NC_008062.1 403611 404966 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: bur:Bcep18194_C6620 xanthine/uracil/vitamin C transporter; xanthine/uracil/vitamin C permease complement(403611..404966) Burkholderia cenocepacia AU 1054 4096574 YP_625688.1 CDS Bcen_5850 NC_008062.1 405025 406149 R KEGG: bur:Bcep18194_C6621 hypothetical protein; hypothetical protein complement(405025..406149) Burkholderia cenocepacia AU 1054 4096575 YP_625689.1 CDS Bcen_5851 NC_008062.1 406252 407217 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_C6622 transcriptional regulator, LysR family; LysR family transcriptional regulator 406252..407217 Burkholderia cenocepacia AU 1054 4096576 YP_625690.1 CDS Bcen_5852 NC_008062.1 407441 409426 D PFAM: gamma-glutamyltranspeptidase; KEGG: bur:Bcep18194_C6623 gamma-glutamyltransferase; gamma-glutamyltransferase 407441..409426 Burkholderia cenocepacia AU 1054 4096577 YP_625691.1 CDS Bcen_5853 NC_008062.1 409842 410384 D PFAM: Late embryogenesis abundant protein; KEGG: bur:Bcep18194_C6625 hypothetical protein; late embryogenesis abundant protein 409842..410384 Burkholderia cenocepacia AU 1054 4096578 YP_625692.1 CDS Bcen_5854 NC_008062.1 410795 410968 D KEGG: bur:Bcep18194_C6631 protein of unknown function UPF0167; hypothetical protein 410795..410968 Burkholderia cenocepacia AU 1054 4096579 YP_625693.1 CDS Bcen_5855 NC_008062.1 411025 412275 D PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_C6632 metallophosphoesterase; metallophosphoesterase 411025..412275 Burkholderia cenocepacia AU 1054 4096580 YP_625694.1 CDS Bcen_5856 NC_008062.1 412279 415749 D KEGG: bur:Bcep18194_C6633 hypothetical protein; hypothetical protein 412279..415749 Burkholderia cenocepacia AU 1054 4096985 YP_625695.1 CDS Bcen_5857 NC_008062.1 415870 416394 D PFAM: metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD region; KEGG: bur:Bcep18194_C6634 metal-dependent phosphohydrolase; metal dependent phosphohydrolase 415870..416394 Burkholderia cenocepacia AU 1054 4096986 YP_625696.1 CDS Bcen_5858 NC_008062.1 416404 417081 D KEGG: bur:Bcep18194_C6635 hypothetical protein; hypothetical protein 416404..417081 Burkholderia cenocepacia AU 1054 4096987 YP_625697.1 CDS Bcen_5859 NC_008062.1 417235 417705 R KEGG: bur:Bcep18194_C6636 hypothetical protein; hypothetical protein complement(417235..417705) Burkholderia cenocepacia AU 1054 4096988 YP_625698.1 CDS Bcen_5860 NC_008062.1 423770 424174 D TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_A5545 transcriptional regulator, MerR family; MerR family transcriptional regulator 423770..424174 Burkholderia cenocepacia AU 1054 4096994 YP_625699.1 CDS Bcen_5861 NC_008062.1 424390 424536 D KEGG: bur:Bcep18194_A5544 hypothetical protein; hypothetical protein 424390..424536 Burkholderia cenocepacia AU 1054 4096995 YP_625700.1 CDS Bcen_5862 NC_008062.1 424684 425019 D KEGG: bur:Bcep18194_A5543 hypothetical protein; hypothetical protein 424684..425019 Burkholderia cenocepacia AU 1054 4096996 YP_625701.1 CDS Bcen_5863 NC_008062.1 425035 425880 R PFAM: protein of unknown function DUF519; KEGG: bur:Bcep18194_A5542 protein of unknown function DUF519; hypothetical protein complement(425035..425880) Burkholderia cenocepacia AU 1054 4096997 YP_625702.1 CDS Bcen_5864 NC_008062.1 425992 426963 R PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_A5541 aldo/keto reductase; aldo/keto reductase complement(425992..426963) Burkholderia cenocepacia AU 1054 4096998 YP_625703.1 CDS Bcen_5865 NC_008062.1 427127 427915 D catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 427127..427915 Burkholderia cenocepacia AU 1054 4096999 YP_625704.1 CDS Bcen_5866 NC_008062.1 428040 429239 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(428040..429239) Burkholderia cenocepacia AU 1054 4096927 YP_625705.1 CDS Bcen_5867 NC_008062.1 429465 431588 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 429465..431588 Burkholderia cenocepacia AU 1054 4096928 YP_625706.1 CDS Bcen_5868 NC_008062.1 431815 432366 D KEGG: bur:Bcep18194_A5537 uncharacterized protein probably involved in high-affinity Fe2+ transport; hypothetical protein 431815..432366 Burkholderia cenocepacia AU 1054 4096929 YP_625707.1 CDS Bcen_5869 NC_008062.1 432422 432754 D KEGG: bur:Bcep18194_A5536 hypothetical protein; hypothetical protein 432422..432754 Burkholderia cenocepacia AU 1054 4096930 YP_625708.1 CDS Bcen_5870 NC_008062.1 432813 433655 D PFAM: iron permease FTR1; KEGG: bur:Bcep18194_A5535 iron permease FTR1; iron permease FTR1 432813..433655 Burkholderia cenocepacia AU 1054 4096931 YP_625709.1 CDS Bcen_5871 NC_008062.1 433652 435049 D KEGG: bur:Bcep18194_A5534 polyferredoxin-like; polyferredoxin-like 433652..435049 Burkholderia cenocepacia AU 1054 4096932 YP_625710.1 CDS Bcen_5872 NC_008062.1 435404 436429 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902; KEGG: plu:plu2447 transposase, IS110 family; transposase IS116/IS110/IS902 complement(435404..436429) Burkholderia cenocepacia AU 1054 4096933 YP_625711.1 CDS Bcen_5873 NC_008062.1 436688 436933 R KEGG: bur:Bcep18194_A5533 hypothetical protein; hypothetical protein complement(436688..436933) Burkholderia cenocepacia AU 1054 4096934 YP_625712.1 CDS Bcen_5874 NC_008062.1 437073 437555 R KEGG: bur:Bcep18194_A5532 hypothetical protein; hypothetical protein complement(437073..437555) Burkholderia cenocepacia AU 1054 4096935 YP_625713.1 CDS Bcen_5875 NC_008062.1 437653 438525 R PFAM: Pirin-like; KEGG: bur:Bcep18194_A5531 pirin-like protein; Pirin-like complement(437653..438525) Burkholderia cenocepacia AU 1054 4096936 YP_625714.1 CDS Bcen_5876 NC_008062.1 438647 439621 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5530 transcriptional regulator, LysR family; LysR family transcriptional regulator 438647..439621 Burkholderia cenocepacia AU 1054 4096937 YP_625715.1 CDS Bcen_5877 NC_008062.1 440006 440428 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bur:Bcep18194_A5529 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(440006..440428) Burkholderia cenocepacia AU 1054 4096938 YP_625716.1 CDS Bcen_5878 NC_008062.1 440448 441182 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: bur:Bcep18194_A5528 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(440448..441182) Burkholderia cenocepacia AU 1054 4096939 YP_625717.1 CDS Bcen_5879 NC_008062.1 441217 441948 R TIGRFAM: TonB-like; KEGG: bur:Bcep18194_A5527 TonB-like protein; TonB-like complement(441217..441948) Burkholderia cenocepacia AU 1054 4096940 YP_625718.1 CDS Bcen_5880 NC_008062.1 442167 442403 R PFAM: BFD-like [2Fe-2S]-binding region; KEGG: bur:Bcep18194_A5526 bacterioferritin-associated ferredoxin; BFD-like (2Fe-2S)-binding region complement(442167..442403) Burkholderia cenocepacia AU 1054 4096941 YP_625719.1 CDS Bcen_5881 NC_008062.1 442555 443412 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(442555..443412) Burkholderia cenocepacia AU 1054 4096942 YP_625720.1 CDS Bcen_5882 NC_008062.1 443447 443923 R TIGRFAM: bacterioferritin; PFAM: Ferritin and Dps; KEGG: bur:Bcep18194_A5524 bacterioferritin; bacterioferritin complement(443447..443923) Burkholderia cenocepacia AU 1054 4096943 YP_625721.1 CDS Bcen_5883 NC_008062.1 444117 445640 R TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: bur:Bcep18194_A5523 Fe-S type hydro-lyases tartrate/fumarate; tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit complement(444117..445640) Burkholderia cenocepacia AU 1054 4096944 YP_625722.1 CDS Bcen_5884 NC_008062.1 445685 446269 R PFAM: Uncharacterized protein UPF0114; KEGG: bur:Bcep18194_A5522 uncharacterized protein UPF0114; hypothetical protein complement(445685..446269) Burkholderia cenocepacia AU 1054 4096945 YP_625723.1 CDS Bcen_5885 NC_008062.1 446382 447290 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_A5521 protein of unknown function DUF6, transmembrane; hypothetical protein complement(446382..447290) Burkholderia cenocepacia AU 1054 4096619 YP_625724.1 CDS Bcen_5886 NC_008062.1 447610 449592 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 447610..449592 Burkholderia cenocepacia AU 1054 4096620 YP_625725.1 CDS Bcen_5887 NC_008062.1 449678 450022 D KEGG: bur:Bcep18194_A5519 membrane protein-like; membrane protein-like 449678..450022 Burkholderia cenocepacia AU 1054 4096621 YP_625726.1 CDS Bcen_5888 NC_008062.1 450026 452041 D PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_A5518 Na+/solute symporter; Na+/solute symporter 450026..452041 Burkholderia cenocepacia AU 1054 4096622 YP_625727.1 CDS Bcen_5889 NC_008062.1 452071 452673 R KEGG: bur:Bcep18194_A5517 hypothetical protein; hypothetical protein complement(452071..452673) Burkholderia cenocepacia AU 1054 4096623 YP_625728.1 CDS Bcen_5890 NC_008062.1 452773 453393 R KEGG: bur:Bcep18194_A5516 hypothetical protein; hypothetical protein complement(452773..453393) Burkholderia cenocepacia AU 1054 4096624 YP_625729.1 CDS Bcen_5891 NC_008062.1 453833 456151 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bur:Bcep18194_A5515 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(453833..456151) Burkholderia cenocepacia AU 1054 4096626 YP_625730.1 CDS Bcen_5892 NC_008062.1 456316 456936 D TIGRFAM: HAD-superfamily hydrolase subfamily IB, PSPase-like; HAD-superfamily subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: bur:Bcep18194_A5502 HAD-superfamily hydrolase subfamily IB, PSPase-like; HAD family hydrolase 456316..456936 Burkholderia cenocepacia AU 1054 4096627 YP_625731.1 CDS Bcen_5893 NC_008062.1 456966 458075 R KEGG: bur:Bcep18194_A5501 hypothetical protein; hypothetical protein complement(456966..458075) Burkholderia cenocepacia AU 1054 4096628 YP_625732.1 CDS Bcen_5894 NC_008062.1 458302 459339 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_A5500 transcriptional regulator, AraC family; AraC family transcriptional regulator 458302..459339 Burkholderia cenocepacia AU 1054 4096629 YP_625733.1 CDS Bcen_5895 NC_008062.1 459407 460456 R KEGG: bur:Bcep18194_A5499 3-carboxymuconate cyclase-like; 3-carboxymuconate cyclase-like complement(459407..460456) Burkholderia cenocepacia AU 1054 4096630 YP_625734.1 CDS Bcen_5896 NC_008062.1 460443 461810 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5498 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(460443..461810) Burkholderia cenocepacia AU 1054 4096631 YP_625735.1 CDS Bcen_5897 NC_008062.1 462019 462378 D KEGG: bur:Bcep18194_A5492 short-chain dehydrogenase/reductase SDR; hypothetical protein 462019..462378 Burkholderia cenocepacia AU 1054 4096632 YP_625736.1 CDS Bcen_5898 NC_008062.1 462396 463376 D KEGG: bur:Bcep18194_A5491 phosphoesterase, DHHA1; phosphoesterase, DHHA1 462396..463376 Burkholderia cenocepacia AU 1054 4096633 YP_625737.1 CDS Bcen_5899 NC_008062.1 463617 465176 D PFAM: DNA photolyase, FAD-binding; DNA photolyase-like; KEGG: bur:Bcep18194_A5488 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photolyase 463617..465176 Burkholderia cenocepacia AU 1054 4096634 YP_625738.1 CDS Bcen_5900 NC_008062.1 465312 466544 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5487 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(465312..466544) Burkholderia cenocepacia AU 1054 4096635 YP_625739.1 CDS Bcen_5901 NC_008062.1 466711 467652 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5486 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(466711..467652) Burkholderia cenocepacia AU 1054 4096636 YP_625740.1 CDS Bcen_5902 NC_008062.1 467888 468928 D KEGG: bur:Bcep18194_A5485 alpha/beta hydrolase; alpha/beta hydrolase 467888..468928 Burkholderia cenocepacia AU 1054 4096637 YP_625741.1 CDS Bcen_5903 NC_008062.1 469053 469808 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: bur:Bcep18194_A5484 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 469053..469808 Burkholderia cenocepacia AU 1054 4097054 YP_625742.1 CDS Bcen_5904 NC_008062.1 469830 470750 R PFAM: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_A5483 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein complement(469830..470750) Burkholderia cenocepacia AU 1054 4097055 YP_625743.1 CDS Bcen_5905 NC_008062.1 470963 472486 D catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 470963..472486 Burkholderia cenocepacia AU 1054 4097056 YP_625744.1 CDS Bcen_5906 NC_008062.1 472491 473186 D TIGRFAM: Histidine utilization repressor; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated; KEGG: bur:Bcep18194_A5481 transcriptional regulator, histidine utilization repressor, GntR family; histidine utilization repressor 472491..473186 Burkholderia cenocepacia AU 1054 4097057 YP_625745.1 CDS Bcen_5907 NC_008062.1 473226 474914 D catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 473226..474914 Burkholderia cenocepacia AU 1054 4097058 YP_625746.1 CDS Bcen_5908 NC_008062.1 474917 475540 D PFAM: protein of unknown function DUF886; KEGG: bur:Bcep18194_A5479 protein of unknown function DUF886; hypothetical protein 474917..475540 Burkholderia cenocepacia AU 1054 4097059 YP_625747.1 CDS Bcen_5909 NC_008062.1 475545 476768 D catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 475545..476768 Burkholderia cenocepacia AU 1054 4097060 YP_625748.1 CDS Bcen_5910 NC_008062.1 476970 478346 D catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 476970..478346 Burkholderia cenocepacia AU 1054 4097061 YP_625749.1 CDS Bcen_5911 NC_008062.1 478407 479204 D PFAM: N-formylglutamate amidohydrolase; KEGG: bur:Bcep18194_A5476 N-formylglutamate deformylase; N-formylglutamate amidohydrolase 478407..479204 Burkholderia cenocepacia AU 1054 4097062 YP_625750.1 CDS Bcen_5912 NC_008062.1 479541 479765 D KEGG: bur:Bcep18194_A5475 hypothetical protein; hypothetical protein 479541..479765 Burkholderia cenocepacia AU 1054 4097063 YP_625751.1 CDS Bcen_5913 NC_008062.1 479946 480785 D PFAM: peptidase C26; KEGG: bur:Bcep18194_A5474 peptidase C26; peptidase C26 479946..480785 Burkholderia cenocepacia AU 1054 4097064 YP_625752.1 CDS Bcen_5914 NC_008062.1 480770 482107 D PFAM: glutamine synthetase, catalytic region; KEGG: bur:Bcep18194_A5473 glutamate--ammonia ligase; glutamate--ammonia ligase 480770..482107 Burkholderia cenocepacia AU 1054 4097065 YP_625753.1 CDS Bcen_5915 NC_008062.1 482136 483530 D PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_A5472 aminotransferase class-III; aminotransferase 482136..483530 Burkholderia cenocepacia AU 1054 4097066 YP_625754.1 CDS Bcen_5916 NC_008062.1 483821 484747 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5470 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(483821..484747) Burkholderia cenocepacia AU 1054 4097068 YP_625755.1 CDS Bcen_5917 NC_008062.1 484897 486648 D PFAM: acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_A5469 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase-like 484897..486648 Burkholderia cenocepacia AU 1054 4097069 YP_625756.1 CDS Bcen_5918 NC_008062.1 486645 487856 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A5468 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 486645..487856 Burkholderia cenocepacia AU 1054 4097070 YP_625757.1 CDS Bcen_5919 NC_008062.1 487947 489359 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5467 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 487947..489359 Burkholderia cenocepacia AU 1054 4097071 YP_625758.1 CDS Bcen_5920 NC_008062.1 489618 489893 R PFAM: Fe(II) trafficking protein YggX; KEGG: bur:Bcep18194_A5466 Fe(II) trafficking protein YggX; hypothetical protein complement(489618..489893) Burkholderia cenocepacia AU 1054 4096696 YP_625759.1 CDS Bcen_5921 NC_008062.1 489947 491326 R catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase complement(489947..491326) Burkholderia cenocepacia AU 1054 4096697 YP_625760.1 CDS Bcen_5922 NC_008062.1 491350 495558 D KEGG: bur:Bcep18194_A5464 ATP-dependent helicase HrpA TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-like; helicase-associated region; protein of unknown function DUF1605; SMART: ATPase; DEAD/DEAH box helicase-like; ATP-dependent helicase HrpA 491350..495558 Burkholderia cenocepacia AU 1054 4096698 YP_625761.1 CDS Bcen_5923 NC_008062.1 495726 496715 D KEGG: bur:Bcep18194_A5463 hypothetical protein; hypothetical protein 495726..496715 Burkholderia cenocepacia AU 1054 4096699 YP_625762.1 CDS Bcen_5924 NC_008062.1 496732 497706 D KEGG: bur:Bcep18194_A5462 sterol desaturase-like; sterol desaturase-like 496732..497706 Burkholderia cenocepacia AU 1054 4096700 YP_625763.1 CDS Bcen_5925 NC_008062.1 497832 498659 D KEGG: bur:Bcep18194_A5461 hypothetical protein; hypothetical protein 497832..498659 Burkholderia cenocepacia AU 1054 4096701 YP_625764.1 CDS Bcen_5926 NC_008062.1 498656 499471 D PFAM: molybdopterin binding domain; KEGG: bur:Bcep18194_A5460 molybdopterin binding protein; molybdopterin binding domain-containing protein 498656..499471 Burkholderia cenocepacia AU 1054 4096702 YP_625765.1 CDS Bcen_5927 NC_008062.1 499588 500052 R SMART: Rhodanese-like; KEGG: bur:Bcep18194_A5459 rhodanese-like protein; rhodanese-like protein complement(499588..500052) Burkholderia cenocepacia AU 1054 4096703 YP_625766.1 CDS Bcen_5928 NC_008062.1 500459 501874 D KEGG: bur:Bcep18194_A5458 glutamine synthetase type I TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase, type I 500459..501874 Burkholderia cenocepacia AU 1054 4096704 YP_625767.1 CDS Bcen_5929 NC_008062.1 502036 503178 D PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; KEGG: bur:Bcep18194_A5457 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase, nitrogen specific, NtrB 502036..503178 Burkholderia cenocepacia AU 1054 4096705 YP_625768.1 CDS Bcen_5930 NC_008062.1 503216 504730 D KEGG: bur:Bcep18194_A5456 nitrogen metabolism transcriptional regulator, NtrC, fis family TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor, interaction region; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; nitrogen metabolism transcriptional regulator, NtrC, Fis family 503216..504730 Burkholderia cenocepacia AU 1054 4096706 YP_625769.1 CDS Bcen_5931 NC_008062.1 504761 506926 D PFAM: peptidase S9, prolyl oligopeptidase active site region; peptidase S9A, prolyl oligopeptidase-like beta-propeller; KEGG: bur:Bcep18194_A5455 peptidase S9, prolyl oligopeptidase active site region; peptidase S9, prolyl oligopeptidase active site region 504761..506926 Burkholderia cenocepacia AU 1054 4096707 YP_625770.1 CDS Bcen_5932 NC_008062.1 506948 507724 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bur:Bcep18194_A5454 exodeoxyribonuclease III xth; exodeoxyribonuclease III (xth) complement(506948..507724) Burkholderia cenocepacia AU 1054 4096708 YP_625771.1 CDS Bcen_5933 NC_008062.1 508070 508873 R KEGG: cvi:CV1369 hypothetical protein; hypothetical protein complement(508070..508873) Burkholderia cenocepacia AU 1054 4096710 YP_625772.1 CDS Bcen_5934 NC_008062.1 509171 509863 R TIGRFAM: Aspartate racemase; PFAM: Asp/Glu racemase; KEGG: bur:Bcep18194_A5449 aspartate racemase; aspartate racemase complement(509171..509863) Burkholderia cenocepacia AU 1054 4096711 YP_625773.2 CDS Bcen_5935 NC_008062.1 510068 511219 D involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 510068..511219 Burkholderia cenocepacia AU 1054 4096712 YP_625774.1 CDS Bcen_5936 NC_008062.1 511287 513374 R PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: bur:Bcep18194_A5447 oligopeptidase A; oligopeptidase A complement(511287..513374) Burkholderia cenocepacia AU 1054 4096713 YP_625775.1 CDS Bcen_5937 NC_008062.1 513684 514541 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(513684..514541) Burkholderia cenocepacia AU 1054 4096714 YP_625776.1 CDS Bcen_5938 NC_008062.1 514769 515407 R PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: bur:Bcep18194_A5445 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(514769..515407) Burkholderia cenocepacia AU 1054 4097188 YP_625777.1 CDS Bcen_5939 NC_008062.1 515404 517920 R PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; PAS fold-3; PAS fold-4; PAS fold; SMART: PAS; PAC motif; KEGG: bur:Bcep18194_A5444 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(515404..517920) Burkholderia cenocepacia AU 1054 4097189 YP_625778.1 CDS aceE NC_008062.1 518194 520890 D E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 518194..520890 Burkholderia cenocepacia AU 1054 4097190 YP_625779.1 CDS Bcen_5941 NC_008062.1 520959 522608 D KEGG: bur:Bcep18194_A5442 dihydrolipoamide acetyltransferase TIGRFAM: Dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment; catalytic domain of components of various dehydrogenase complexes; E3 binding; dihydrolipoamide acetyltransferase 520959..522608 Burkholderia cenocepacia AU 1054 4097191 YP_625780.1 CDS Bcen_5942 NC_008062.1 522895 524661 D TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bur:Bcep18194_A5441 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 522895..524661 Burkholderia cenocepacia AU 1054 4097192 YP_625781.1 CDS Bcen_5943 NC_008062.1 524853 525419 R TIGRFAM: Phasin; KEGG: bur:Bcep18194_A5440 phasin; phasin complement(524853..525419) Burkholderia cenocepacia AU 1054 4097193 YP_625782.1 CDS Bcen_5944 NC_008062.1 526074 527240 D PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: bur:Bcep18194_A5439 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 526074..527240 Burkholderia cenocepacia AU 1054 4097194 YP_625783.1 CDS Bcen_5945 NC_008062.1 527364 528173 R PFAM: regulatory proteins, IclR; KEGG: bur:Bcep18194_A5438 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(527364..528173) Burkholderia cenocepacia AU 1054 4097195 YP_625784.1 CDS Bcen_5946 NC_008062.1 528357 529079 D PFAM: protein of unknown function DUF224, cysteine-rich region; KEGG: bur:Bcep18194_A5437 protein of unknown function DUF224, cysteine-rich region; hypothetical protein 528357..529079 Burkholderia cenocepacia AU 1054 4097196 YP_625785.1 CDS Bcen_5947 NC_008062.1 529114 530526 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: bur:Bcep18194_A5436 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin, iron-sulfur binding 529114..530526 Burkholderia cenocepacia AU 1054 4097197 YP_625786.1 CDS Bcen_5948 NC_008062.1 530655 530882 D KEGG: bur:Bcep18194_A5435 hypothetical protein; hypothetical protein 530655..530882 Burkholderia cenocepacia AU 1054 4097198 YP_625787.1 CDS Bcen_5949 NC_008062.1 530984 531466 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bur:Bcep18194_A5434 protein tyrosine phosphatase; protein tyrosine phosphatase 530984..531466 Burkholderia cenocepacia AU 1054 4097199 YP_625788.1 CDS Bcen_5950 NC_008062.1 531581 532120 D TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: bur:Bcep18194_A5433 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 531581..532120 Burkholderia cenocepacia AU 1054 4097200 YP_625789.1 CDS Bcen_5951 NC_008062.1 532186 533409 D catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 532186..533409 Burkholderia cenocepacia AU 1054 4097201 YP_625790.1 CDS Bcen_5952 NC_008062.1 533477 533884 D TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU-like-like; KEGG: bur:Bcep18194_A5431 FeS cluster assembly scaffold IscU; scaffold protein 533477..533884 Burkholderia cenocepacia AU 1054 4097202 YP_625791.1 CDS Bcen_5953 NC_008062.1 533950 534273 D TIGRFAM: iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF; KEGG: bur:Bcep18194_A5430 iron-sulphur cluster assembly protein IscA; iron-sulfur cluster assembly protein IscA 533950..534273 Burkholderia cenocepacia AU 1054 4097203 YP_625792.2 CDS hscB NC_008062.1 534370 534897 D J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 534370..534897 Burkholderia cenocepacia AU 1054 4097204 YP_625793.1 CDS hscA NC_008062.1 534952 536820 D involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 534952..536820 Burkholderia cenocepacia AU 1054 4097205 YP_625794.1 CDS Bcen_5956 NC_008062.1 536908 537249 D TIGRFAM: Ferredoxin, 2Fe-2S type; PFAM: ferredoxin; KEGG: bur:Bcep18194_A5427 ferredoxin, 2Fe-2S type; ferredoxin, 2Fe-2S type 536908..537249 Burkholderia cenocepacia AU 1054 4097206 YP_625795.1 CDS Bcen_5957 NC_008062.1 537269 537478 D PFAM: protein of unknown function DUF528; KEGG: bur:Bcep18194_A5426 protein of unknown function DUF528; hypothetical protein 537269..537478 Burkholderia cenocepacia AU 1054 4097245 YP_625796.1 CDS Bcen_5958 NC_008062.1 537632 538360 R PFAM: 17 kDa surface antigen; KEGG: bur:Bcep18194_A5425 outer membrane lipoprotein; 17 kDa surface antigen complement(537632..538360) Burkholderia cenocepacia AU 1054 4097246 YP_625797.1 CDS lysS NC_008062.1 538707 540233 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(538707..540233) Burkholderia cenocepacia AU 1054 4097247 YP_625798.1 CDS Bcen_5960 NC_008062.1 540307 541482 R TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF; KEGG: bur:Bcep18194_A5423 peptide chain release factor 2; peptide chain release factor 2 complement(540307..541482) Burkholderia cenocepacia AU 1054 4097248 YP_625799.1 CDS Bcen_5961 NC_008062.1 541565 543262 R TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ-like; phosphoesterase, DHHA1; KEGG: bur:Bcep18194_A5422 RecJ exonuclease; single-stranded-DNA-specific exonuclease RecJ complement(541565..543262) Burkholderia cenocepacia AU 1054 4097249 YP_625800.1 CDS Bcen_5962 NC_008062.1 543277 544353 R KEGG: bur:Bcep18194_A5421 hypothetical protein; hypothetical protein complement(543277..544353) Burkholderia cenocepacia AU 1054 4097250 YP_625801.1 CDS Bcen_5963 NC_008062.1 544503 545756 D TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: bur:Bcep18194_A5420 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 544503..545756 Burkholderia cenocepacia AU 1054 4097251 YP_625802.1 CDS Bcen_5964 NC_008062.1 545749 546510 D KEGG: bur:Bcep18194_A5419 lipoprotein releasing system, ATP-binding protein TIGRFAM: Lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase; lipoprotein releasing system, ATP-binding protein 545749..546510 Burkholderia cenocepacia AU 1054 4097252 YP_625803.1 CDS Bcen_5965 NC_008062.1 546577 547365 D PFAM: TatD-related deoxyribonuclease; KEGG: bur:Bcep18194_A5418 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 546577..547365 Burkholderia cenocepacia AU 1054 4097253 YP_625804.1 CDS Bcen_5966 NC_008062.1 547422 549911 D TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase-like; ComEC/Rec2-related protein; KEGG: bur:Bcep18194_A5417 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-related competence protein ComEC/Rec2 547422..549911 Burkholderia cenocepacia AU 1054 4097254 YP_625805.1 CDS Bcen_5967 NC_008062.1 550151 550996 D KEGG: bur:Bcep18194_A5416 hypothetical protein; hypothetical protein 550151..550996 Burkholderia cenocepacia AU 1054 4097255 YP_625806.1 CDS pyrG NC_008062.1 551188 552846 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 551188..552846 Burkholderia cenocepacia AU 1054 4097256 YP_625807.1 CDS Bcen_5969 NC_008062.1 552843 553697 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 552843..553697 Burkholderia cenocepacia AU 1054 4097257 YP_625808.1 CDS eno NC_008062.1 553804 555087 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 553804..555087 Burkholderia cenocepacia AU 1054 4097258 YP_625809.1 CDS ftsB NC_008062.1 555169 555594 D forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 555169..555594 Burkholderia cenocepacia AU 1054 4097259 YP_625810.1 CDS Bcen_5972 NC_008062.1 555684 556049 R KEGG: bur:Bcep18194_A5411 hypothetical protein; hypothetical protein complement(555684..556049) Burkholderia cenocepacia AU 1054 4097260 YP_625811.1 CDS Bcen_5973 NC_008062.1 556187 557113 R PFAM: Hsp33 protein; KEGG: bur:Bcep18194_A5410 HSP33 protein; Hsp33 protein complement(556187..557113) Burkholderia cenocepacia AU 1054 4097261 YP_625812.1 CDS Bcen_5974 NC_008062.1 557163 557687 R PFAM: transferase hexapeptide repeat; KEGG: bur:Bcep18194_A5409 carbonic anhydrases/acetyltransferasesisoleucine patch superfamily; hexapaptide repeat-containing transferase complement(557163..557687) Burkholderia cenocepacia AU 1054 4097262 YP_625813.1 CDS Bcen_5975 NC_008062.1 557831 558691 D PFAM: protein of unknown function DUF455; KEGG: bur:Bcep18194_A5408 protein of unknown function DUF455; hypothetical protein 557831..558691 Burkholderia cenocepacia AU 1054 4097263 YP_625814.1 CDS Bcen_5976 NC_008062.1 558865 559755 D PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_A5407 alpha/beta hydrolase; alpha/beta hydrolase fold 558865..559755 Burkholderia cenocepacia AU 1054 4097264 YP_625815.1 CDS Bcen_5977 NC_008062.1 559829 560668 D PFAM: PHP-like; SMART: Phosphoesterase PHP-like; KEGG: bur:Bcep18194_A5406 PHP-like metal-dependent phosphoesterase; PHP-like 559829..560668 Burkholderia cenocepacia AU 1054 4096600 YP_625816.1 CDS Bcen_5978 NC_008062.1 560739 561371 D TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: SUA5/yciO/yrdC-like; KEGG: bur:Bcep18194_A5405 SUA5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC 560739..561371 Burkholderia cenocepacia AU 1054 4096601 YP_625817.1 CDS Bcen_5979 NC_008062.1 561419 562081 D PFAM: peptidase M50; KEGG: bur:Bcep18194_A5404 peptidase M50; peptidase M50 561419..562081 Burkholderia cenocepacia AU 1054 4096602 YP_625818.1 CDS Bcen_5980 NC_008062.1 562090 563292 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 562090..563292 Burkholderia cenocepacia AU 1054 4096603 YP_625819.1 CDS Bcen_5981 NC_008062.1 563301 563903 D PFAM: Methyltransferase type 12; KEGG: bur:Bcep18194_A5402 hypothetical protein; methyltransferase type 12 563301..563903 Burkholderia cenocepacia AU 1054 4096604 YP_625820.1 CDS Bcen_5982 NC_008062.1 563950 564852 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 563950..564852 Burkholderia cenocepacia AU 1054 4096605 YP_625821.1 CDS Bcen_5983 NC_008062.1 564964 566109 D KEGG: bur:Bcep18194_A5400 uncharacterized lipoprotein; uncharacterized lipoprotein 564964..566109 Burkholderia cenocepacia AU 1054 4096606 YP_625822.1 CDS Bcen_5984 NC_008062.1 566114 566890 D PFAM: beta-lactamase-like; KEGG: bur:Bcep18194_A5399 beta-lactamase-like; beta-lactamase-like 566114..566890 Burkholderia cenocepacia AU 1054 4096607 YP_625823.1 CDS Bcen_5985 NC_008062.1 567004 567273 R KEGG: bur:Bcep18194_A5398 hypothetical protein; hypothetical protein complement(567004..567273) Burkholderia cenocepacia AU 1054 4096608 YP_625824.1 CDS Bcen_5986 NC_008062.1 567500 568720 R PFAM: Cupin 4; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; KEGG: bur:Bcep18194_A5397 cupin domain protein; cupin 4 complement(567500..568720) Burkholderia cenocepacia AU 1054 4096609 YP_625825.1 CDS Bcen_5987 NC_008062.1 568777 569295 D KEGG: bur:Bcep18194_A5396 FKBP-type peptidyl-prolyl cis-trans isomerases 2-like; FKBP-type peptidyl-prolyl cis-trans isomerases 2-like 568777..569295 Burkholderia cenocepacia AU 1054 4096610 YP_625826.1 CDS Bcen_5988 NC_008062.1 569275 570522 R KEGG: bur:Bcep18194_A5395 hypothetical protein; hypothetical protein complement(569275..570522) Burkholderia cenocepacia AU 1054 4096611 YP_625827.1 CDS Bcen_5989 NC_008062.1 570527 573184 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(570527..573184) Burkholderia cenocepacia AU 1054 4096612 YP_625828.1 CDS Bcen_5990 NC_008062.1 573528 573854 D PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bur:Bcep18194_C7247 ethyl tert-butyl ether degradation protein, EthD; ethyl tert-butyl ether degradation EthD 573528..573854 Burkholderia cenocepacia AU 1054 4096613 YP_625829.1 CDS Bcen_5991 NC_008062.1 574082 575704 R PFAM: HI0933-like protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A5392 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(574082..575704) Burkholderia cenocepacia AU 1054 4096614 YP_625830.1 CDS Bcen_5992 NC_008062.1 576009 576812 R PFAM: inositol monophosphatase; KEGG: bur:Bcep18194_A5391 inositol-1(or 4)-monophosphatase; inositol monophosphatase complement(576009..576812) Burkholderia cenocepacia AU 1054 4096615 YP_625831.1 CDS Bcen_5993 NC_008062.1 577048 577917 D TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bur:Bcep18194_A5390 RNA methyltransferase TrmH, group 1; RNA methyltransferase TrmH, group 1 577048..577917 Burkholderia cenocepacia AU 1054 4096616 YP_625832.1 CDS Bcen_5994 NC_008062.1 578190 578993 D TIGRFAM: serine O-acetyltransferase; KEGG: bur:Bcep18194_A5389 serine O-acetyltransferase; serine O-acetyltransferase 578190..578993 Burkholderia cenocepacia AU 1054 4096617 YP_625833.1 CDS Bcen_5995 NC_008062.1 579046 579846 R catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase complement(579046..579846) Burkholderia cenocepacia AU 1054 4096618 YP_625834.1 CDS Bcen_5996 NC_008062.1 579873 580364 R PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: bur:Bcep18194_A5387 peptidyl-prolyl cis-trans isomerase, cyclophilin type; peptidyl-prolyl cis-trans isomerase, cyclophilin type complement(579873..580364) Burkholderia cenocepacia AU 1054 4096638 YP_625835.1 CDS Bcen_5997 NC_008062.1 580453 581028 R PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: bur:Bcep18194_A5386 peptidylprolyl isomerase; peptidylprolyl isomerase complement(580453..581028) Burkholderia cenocepacia AU 1054 4096639 YP_625836.1 CDS Bcen_5998 NC_008062.1 581068 581823 R PFAM: TPR repeat; Tetratricopeptide TPR_2; SMART: Tetratricopeptide region; KEGG: bur:Bcep18194_A5385 TPR repeat protein; tetratricopeptide TPR_2 complement(581068..581823) Burkholderia cenocepacia AU 1054 4096640 YP_625837.1 CDS cysS NC_008062.1 582025 583422 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 582025..583422 Burkholderia cenocepacia AU 1054 4096641 YP_625838.1 CDS Bcen_6000 NC_008062.1 583466 584293 D PFAM: HhH-GPD; KEGG: bur:Bcep18194_A5383 3-methyladenine DNA glycosylase/8-oxoguanineDNA glycosylase; DNA-3-methyladenine glycosylase II 583466..584293 Burkholderia cenocepacia AU 1054 4096642 YP_625839.1 CDS Bcen_6001 NC_008062.1 584397 585368 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 584397..585368 Burkholderia cenocepacia AU 1054 4096643 YP_625840.1 CDS Bcen_6002 NC_008062.1 585415 586836 D TIGRFAM: tRNA(Ile)-lysidine synthetase-like; PFAM: PP-loop; KEGG: bur:Bcep18194_A5381 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase-like 585415..586836 Burkholderia cenocepacia AU 1054 4096644 YP_625841.1 CDS Bcen_6003 NC_008062.1 587179 588432 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 587179..588432 Burkholderia cenocepacia AU 1054 4096645 YP_625842.1 CDS Bcen_6004 NC_008062.1 588844 590232 D KEGG: bur:Bcep18194_B0430 hypothetical protein; hypothetical protein 588844..590232 Burkholderia cenocepacia AU 1054 4096647 YP_625843.1 CDS Bcen_6005 NC_008062.1 590711 592240 D KEGG: bur:Bcep18194_A5377 proton-translocating NADH-quinone oxidoreductase, chain M TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase, chain M 590711..592240 Burkholderia cenocepacia AU 1054 4096648 YP_625844.1 CDS Bcen_6006 NC_008062.1 592516 593403 D TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase, subunit II; COX aromatic rich; KEGG: bur:Bcep18194_A5376 cytochrome o ubiquinol oxidase subunit II; ubiquinol oxidase, subunit II 592516..593403 Burkholderia cenocepacia AU 1054 4096649 YP_625845.1 CDS Bcen_6007 NC_008062.1 593407 595413 D PFAM: cytochrome c oxidase, subunit I; KEGG: bur:Bcep18194_A5375 cytochrome-c oxidase; cytochrome-c oxidase 593407..595413 Burkholderia cenocepacia AU 1054 4096650 YP_625846.1 CDS Bcen_6008 NC_008062.1 595413 596021 D PFAM: cytochrome c oxidase, subunit III; KEGG: bur:Bcep18194_A5374 heme/copper-type cytochrome/quinol oxidase subunit 3-like; cytochrome c oxidase, subunit III 595413..596021 Burkholderia cenocepacia AU 1054 4096651 YP_625847.1 CDS Bcen_6009 NC_008062.1 596022 596354 D PFAM: cytochrome C oxidase subunit IV; KEGG: bur:Bcep18194_A5373 cytochrome c oxidase subunit IV; cytochrome C oxidase subunit IV 596022..596354 Burkholderia cenocepacia AU 1054 4096652 YP_625848.1 CDS Bcen_6010 NC_008062.1 596466 596765 R KEGG: bte:BTH_I0273 hypothetical protein; hypothetical protein complement(596466..596765) Burkholderia cenocepacia AU 1054 4096653 YP_625849.1 CDS Bcen_6011 NC_008062.1 596984 597658 D PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: bte:BTH_I0274 DNA-binding response regulator; two component transcriptional regulator 596984..597658 Burkholderia cenocepacia AU 1054 4096654 YP_625850.1 CDS Bcen_6012 NC_008062.1 597670 599061 D PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; KEGG: bte:BTH_I0275 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase 597670..599061 Burkholderia cenocepacia AU 1054 4096655 YP_625851.1 CDS Bcen_6013 NC_008062.1 599081 599746 D PFAM: transcriptional regulatory protein-like; KEGG: mag:amb2895 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator 599081..599746 Burkholderia cenocepacia AU 1054 4096656 YP_625852.1 CDS Bcen_6014 NC_008062.1 599989 600345 D KEGG: bur:Bcep18194_A5372 hypothetical protein; hypothetical protein 599989..600345 Burkholderia cenocepacia AU 1054 4097020 YP_625853.1 CDS Bcen_6015 NC_008062.1 600487 602361 D PFAM: extracellular solute-binding protein, family 5; KEGG: bur:Bcep18194_A5371 ABC transporter, periplasmic ligand binding protein; extracellular solute-binding protein 600487..602361 Burkholderia cenocepacia AU 1054 4097021 YP_625854.1 CDS Bcen_6016 NC_008062.1 602414 603457 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5370 ABC transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 602414..603457 Burkholderia cenocepacia AU 1054 4097022 YP_625855.1 CDS Bcen_6017 NC_008062.1 603506 604603 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5369 ABC transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 603506..604603 Burkholderia cenocepacia AU 1054 4097023 YP_625856.1 CDS Bcen_6018 NC_008062.1 604600 606222 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: bur:Bcep18194_A5368 ABC transporter, ATPase subunit; ABC transporter related 604600..606222 Burkholderia cenocepacia AU 1054 4097024 YP_625857.1 CDS Bcen_6019 NC_008062.1 606351 607022 D PFAM: NLP/P60; KEGG: bur:Bcep18194_A5367 NLP/P60 family protein; NLP/P60 606351..607022 Burkholderia cenocepacia AU 1054 4097025 YP_625858.1 CDS Bcen_6020 NC_008062.1 607176 608093 R PFAM: Patatin; KEGG: bur:Bcep18194_A5366 patatin; patatin complement(607176..608093) Burkholderia cenocepacia AU 1054 4097026 YP_625859.1 CDS gltX NC_008062.1 608372 609781 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 608372..609781 Burkholderia cenocepacia AU 1054 4097027 YP_625860.1 CDS Bcen_6022 NC_008062.1 611300 611764 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5364 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 611300..611764 Burkholderia cenocepacia AU 1054 4097073 YP_625861.1 CDS Bcen_6023 NC_008062.1 611788 612669 R PFAM: helix-turn-helix, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: bur:Bcep18194_A5363 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(611788..612669) Burkholderia cenocepacia AU 1054 4097074 YP_625862.1 CDS Bcen_6024 NC_008062.1 612937 613350 D PFAM: protein of unknown function UPF0131; KEGG: bur:Bcep18194_A5362 protein of unknown function UPF0131; hypothetical protein 612937..613350 Burkholderia cenocepacia AU 1054 4097075 YP_625863.1 CDS Bcen_6025 NC_008062.1 613499 615091 R Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase complement(613499..615091) Burkholderia cenocepacia AU 1054 4097076 YP_625864.1 CDS Bcen_6026 NC_008062.1 615157 615924 R KEGG: bur:Bcep18194_A5360 haloacid dehalogenase, type II TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; PFAM: Haloacid dehalogenase-like hydrolase; haloacid dehalogenase, type II complement(615157..615924) Burkholderia cenocepacia AU 1054 4097077 YP_625865.1 CDS Bcen_6027 NC_008062.1 616082 616987 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5359 transcriptional regulator, LysR family; LysR family transcriptional regulator 616082..616987 Burkholderia cenocepacia AU 1054 4097078 YP_625866.1 CDS Bcen_6028 NC_008062.1 617147 617581 D PFAM: UspA; KEGG: bur:Bcep18194_A5358 universal stress protein, UspA family; hypothetical protein 617147..617581 Burkholderia cenocepacia AU 1054 4097079 YP_625867.1 CDS Bcen_6029 NC_008062.1 617793 619100 R TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: bur:Bcep18194_A5357 isocitrate lyase; isocitrate lyase complement(617793..619100) Burkholderia cenocepacia AU 1054 4097080 YP_625868.1 CDS Bcen_6030 NC_008062.1 619491 621041 R PFAM: helicase-like; DEAD/DEAH box helicase-like; KEGG: bur:Bcep18194_A5356 DEAD/DEAH box helicase; DEAD/DEAH box helicase-like complement(619491..621041) Burkholderia cenocepacia AU 1054 4097081 YP_625869.1 CDS Bcen_6031 NC_008062.1 621399 621668 R PFAM: acyl-coA-binding protein, ACBP; KEGG: bur:Bcep18194_A5355 acyl-CoA-binding protein, ACBP; acyl-CoA-binding protein complement(621399..621668) Burkholderia cenocepacia AU 1054 4097082 YP_625870.1 CDS Bcen_6032 NC_008062.1 621816 622583 D PFAM: peptidase M22, glycoprotease; KEGG: bur:Bcep18194_A5354 peptidase M22, glycoprotease; peptidase M22, glycoprotease 621816..622583 Burkholderia cenocepacia AU 1054 4097083 YP_625871.1 CDS Bcen_6033 NC_008062.1 622580 623080 D TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; FR47-like; KEGG: bur:Bcep18194_A5353 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 622580..623080 Burkholderia cenocepacia AU 1054 4097084 YP_625872.1 CDS Bcen_6034 NC_008062.1 623067 624107 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bur:Bcep18194_A5352 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-related protein 623067..624107 Burkholderia cenocepacia AU 1054 4097085 YP_625873.1 CDS Bcen_6035 NC_008062.1 624104 625069 D KEGG: bur:Bcep18194_A5351 hypothetical protein; hypothetical protein 624104..625069 Burkholderia cenocepacia AU 1054 4097086 YP_625874.1 CDS Bcen_6036 NC_008062.1 625088 625897 R KEGG: bur:Bcep18194_A5350 phosphomethylpyrimidine kinase TIGRFAM: Phosphomethylpyrimidine kinase type-2; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase type-2 complement(625088..625897) Burkholderia cenocepacia AU 1054 4097087 YP_625875.1 CDS Bcen_6037 NC_008062.1 625956 627263 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5349 major facilitator superfamily (MFS_1) transporter; lysophospholipid transporter LplT complement(625956..627263) Burkholderia cenocepacia AU 1054 4097088 YP_625876.1 CDS alr NC_008062.1 627482 628552 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 627482..628552 Burkholderia cenocepacia AU 1054 4097089 YP_625877.1 CDS Bcen_6039 NC_008062.1 628564 629940 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 628564..629940 Burkholderia cenocepacia AU 1054 4097090 YP_625878.1 CDS Bcen_6040 NC_008062.1 630090 630356 D KEGG: bur:Bcep18194_A5346 hypothetical protein; hypothetical protein 630090..630356 Burkholderia cenocepacia AU 1054 4097091 YP_625879.1 CDS Bcen_6041 NC_008062.1 630565 632496 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5345 ABC transporter, fused ATPase subunits; ABC transporter related complement(630565..632496) Burkholderia cenocepacia AU 1054 4097092 YP_625880.1 CDS Bcen_6042 NC_008062.1 632632 633111 D PFAM: glutathione peroxidase; Redoxin; KEGG: bur:Bcep18194_A5344 glutathione peroxidase; glutathione peroxidase 632632..633111 Burkholderia cenocepacia AU 1054 4097093 YP_625881.1 CDS cls NC_008062.1 633163 634602 R catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase complement(633163..634602) Burkholderia cenocepacia AU 1054 4097094 YP_625882.1 CDS Bcen_6044 NC_008062.1 634734 635642 R involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(634734..635642) Burkholderia cenocepacia AU 1054 4097095 YP_625883.1 CDS Bcen_6045 NC_008062.1 635654 636793 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(635654..636793) Burkholderia cenocepacia AU 1054 4097096 YP_625884.1 CDS Bcen_6046 NC_008062.1 636884 637252 R TIGRFAM: conserved hypothetical protein; PFAM: arsenate reductase and related; KEGG: bur:Bcep18194_A5340 hypothetical protein; hypothetical protein complement(636884..637252) Burkholderia cenocepacia AU 1054 4097097 YP_625885.1 CDS dapD NC_008062.1 637252 638079 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(637252..638079) Burkholderia cenocepacia AU 1054 4097098 YP_625886.1 CDS Bcen_6048 NC_008062.1 638125 639357 R catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase complement(638125..639357) Burkholderia cenocepacia AU 1054 4097099 YP_625887.1 CDS Bcen_6049 NC_008062.1 639533 640585 R PFAM: transposase, IS891/IS1136/IS1341; transposase, IS605 OrfB; KEGG: noc:Noc_1587 transposase; transposase, IS605 OrfB complement(639533..640585) Burkholderia cenocepacia AU 1054 4097100 YP_625888.1 CDS Bcen_6050 NC_008062.1 640603 641619 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_A5337 protein of unknown function DUF6, transmembrane; hypothetical protein 640603..641619 Burkholderia cenocepacia AU 1054 4097101 YP_625889.1 CDS Bcen_6051 NC_008062.1 641759 645271 D TIGRFAM: Chromosome segregation protein SMC; PFAM: SMC protein-like; SMCs flexible hinge; KEGG: bur:Bcep18194_A5336 chromosome segregation protein SMC; chromosome segregation protein SMC 641759..645271 Burkholderia cenocepacia AU 1054 4097102 YP_625890.1 CDS Bcen_6052 NC_008062.1 645357 646646 D KEGG: bur:Bcep18194_A5335 hypothetical protein; hypothetical protein 645357..646646 Burkholderia cenocepacia AU 1054 4097103 YP_625891.1 CDS Bcen_6053 NC_008062.1 646646 648886 D KEGG: bur:Bcep18194_A5334 DNA ligase (NAD+) TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; SMART: Helix-hairpin-helix DNA-binding, class 1; DNA ligase, NAD-dependent 646646..648886 Burkholderia cenocepacia AU 1054 4097104 YP_625892.1 CDS Bcen_6054 NC_008062.1 648883 649416 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 648883..649416 Burkholderia cenocepacia AU 1054 4097105 YP_625893.1 CDS Bcen_6055 NC_008062.1 649496 651505 R TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4; pseudouridine synthase; KEGG: bur:Bcep18194_A5332 pseudouridine synthase, Rsu; pseudouridine synthase, Rsu complement(649496..651505) Burkholderia cenocepacia AU 1054 4097106 YP_625894.1 CDS Bcen_6056 NC_008062.1 651522 654098 R catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase complement(651522..654098) Burkholderia cenocepacia AU 1054 4097107 YP_625895.1 CDS Bcen_6057 NC_008062.1 654145 654960 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(654145..654960) Burkholderia cenocepacia AU 1054 4097108 YP_625896.1 CDS rpsB NC_008062.1 655340 656080 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 655340..656080 Burkholderia cenocepacia AU 1054 4097226 YP_625897.1 CDS tsf NC_008062.1 656243 657124 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 656243..657124 Burkholderia cenocepacia AU 1054 4097227 YP_625898.1 CDS pyrH NC_008062.1 657281 657994 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 657281..657994 Burkholderia cenocepacia AU 1054 4097228 YP_625899.1 CDS frr NC_008062.1 658086 658646 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 658086..658646 Burkholderia cenocepacia AU 1054 4097229 YP_625900.1 CDS Bcen_6062 NC_008062.1 658696 659478 D KEGG: bur:Bcep18194_A5325 di-trans-poly-cis-decaprenylcistransferase TIGRFAM: UDP diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; UDP diphosphate synthase 658696..659478 Burkholderia cenocepacia AU 1054 4097230 YP_625901.1 CDS Bcen_6063 NC_008062.1 659472 660293 D PFAM: phosphatidate cytidylyltransferase; KEGG: bur:Bcep18194_A5324 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 659472..660293 Burkholderia cenocepacia AU 1054 4097231 YP_625902.1 CDS Bcen_6064 NC_008062.1 660309 661505 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 660309..661505 Burkholderia cenocepacia AU 1054 4097232 YP_625903.1 CDS Bcen_6065 NC_008062.1 661517 662890 D TIGRFAM: Peptidase M50, membrane-associated zinc metallopeptidase; PFAM: PDZ/DHR/GLGF; peptidase M50; KEGG: bur:Bcep18194_A5322 peptidase M50, membrane-associated zinc metallopeptidase; peptidase M50, membrane-associated zinc metallopeptidase 661517..662890 Burkholderia cenocepacia AU 1054 4097233 YP_625904.1 CDS Bcen_6066 NC_008062.1 662952 665261 D PFAM: surface antigen (D15); surface antigen variable number; KEGG: bur:Bcep18194_A5321 surface antigen (D15); surface antigen (D15) 662952..665261 Burkholderia cenocepacia AU 1054 4097234 YP_625905.1 CDS Bcen_6067 NC_008062.1 665326 665823 D PFAM: outer membrane chaperone Skp (OmpH); KEGG: bur:Bcep18194_A5320 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp (OmpH) 665326..665823 Burkholderia cenocepacia AU 1054 4097235 YP_625906.1 CDS lpxD NC_008062.1 665840 666934 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 665840..666934 Burkholderia cenocepacia AU 1054 4097236 YP_625907.1 CDS fabZ NC_008062.1 667064 667531 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 667064..667531 Burkholderia cenocepacia AU 1054 4097237 YP_625908.1 CDS Bcen_6070 NC_008062.1 667599 668387 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 667599..668387 Burkholderia cenocepacia AU 1054 4097238 YP_625909.1 CDS lpxB NC_008062.1 668391 669560 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 668391..669560 Burkholderia cenocepacia AU 1054 4097239 YP_625910.1 CDS rnhB NC_008062.1 669557 670201 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 669557..670201 Burkholderia cenocepacia AU 1054 4097240 YP_625911.1 CDS Bcen_6073 NC_008062.1 670198 670980 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bur:Bcep18194_A5314 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase (SpoU) 670198..670980 Burkholderia cenocepacia AU 1054 4097241 YP_625912.1 CDS Bcen_6074 NC_008062.1 671081 671896 R PFAM: protein of unknown function DUF299; KEGG: bur:Bcep18194_A5313 protein of unknown function DUF299; hypothetical protein complement(671081..671896) Burkholderia cenocepacia AU 1054 4097242 YP_625913.1 CDS Bcen_6075 NC_008062.1 672273 674675 D catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 672273..674675 Burkholderia cenocepacia AU 1054 4097243 YP_625914.1 CDS Bcen_6076 NC_008062.1 674967 675401 D PFAM: protein of unknown function DUF107; KEGG: bur:Bcep18194_A5311 protein of unknown function DUF107; hypothetical protein 674967..675401 Burkholderia cenocepacia AU 1054 4097244 YP_625915.1 CDS Bcen_6077 NC_008062.1 675438 676373 D PFAM: band 7 protein; KEGG: bur:Bcep18194_A5310 band 7 protein; band 7 protein 675438..676373 Burkholderia cenocepacia AU 1054 4097291 YP_625916.1 CDS smpB NC_008062.1 676525 676971 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(676525..676971) Burkholderia cenocepacia AU 1054 4097292 YP_625917.1 CDS Bcen_6079 NC_008062.1 677071 677508 D PFAM: cyclase/dehydrase; KEGG: bur:Bcep18194_A5308 streptomyces cyclase/dehydrase; cyclase/dehydrase 677071..677508 Burkholderia cenocepacia AU 1054 4097293 YP_625918.1 CDS Bcen_6080 NC_008062.1 677513 677836 D PFAM: protein of unknown function UPF0125; KEGG: bur:Bcep18194_A5307 protein of unknown function UPF0125; hypothetical protein 677513..677836 Burkholderia cenocepacia AU 1054 4097294 YP_625919.1 CDS Bcen_6081 NC_008062.1 677879 678844 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bur:Bcep18194_A5306 hypothetical protein; hypothetical protein complement(677879..678844) Burkholderia cenocepacia AU 1054 4097295 YP_625920.1 CDS Bcen_6082 NC_008062.1 678967 679653 R KEGG: bur:Bcep18194_A5305 hypothetical protein; hypothetical protein complement(678967..679653) Burkholderia cenocepacia AU 1054 4097296 YP_625921.1 CDS Bcen_6083 NC_008062.1 679685 680905 R PFAM: Helix-turn-helix, type 11; KEGG: bur:Bcep18194_A5304 hypothetical protein; helix-turn-helix, type 11 complement(679685..680905) Burkholderia cenocepacia AU 1054 4097297 YP_625922.1 CDS Bcen_6084 NC_008062.1 681020 681784 D PFAM: protein of unknown function DUF899, thioredoxin-like; KEGG: bur:Bcep18194_A5303 protein of unknown function DUF899, thioredoxin-like; hypothetical protein 681020..681784 Burkholderia cenocepacia AU 1054 4097298 YP_625923.1 CDS Bcen_6085 NC_008062.1 681813 682646 D KEGG: bur:Bcep18194_A5302 metal-binding integral membrane protein-like; metal-binding protein 681813..682646 Burkholderia cenocepacia AU 1054 4097299 YP_625924.1 CDS Bcen_6086 NC_008062.1 682926 684386 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 682926..684386 Burkholderia cenocepacia AU 1054 4097300 YP_625925.1 CDS Bcen_6087 NC_008062.1 684393 685001 D KEGG: bur:Bcep18194_A5300 hypothetical protein; hypothetical protein 684393..685001 Burkholderia cenocepacia AU 1054 4097301 YP_625926.1 CDS guaA NC_008062.1 685109 686728 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 685109..686728 Burkholderia cenocepacia AU 1054 4097302 YP_625927.1 CDS Bcen_6089 NC_008062.1 686884 687459 R PFAM: DinB; KEGG: cvi:CV1144 hypothetical protein; DinB complement(686884..687459) Burkholderia cenocepacia AU 1054 4097303 YP_625928.1 CDS Bcen_6090 NC_008062.1 687637 688482 R PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: atc:AGR_L_1187 hypothetical protein PA1367; phenazine biosynthesis PhzC/PhzF protein complement(687637..688482) Burkholderia cenocepacia AU 1054 4097304 YP_625929.1 CDS Bcen_6091 NC_008062.1 688537 689166 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: atc:AGR_L_1188 conserved hypothetical protein VC0191; lysine exporter protein LysE/YggA complement(688537..689166) Burkholderia cenocepacia AU 1054 4097305 YP_625930.1 CDS Bcen_6092 NC_008062.1 689201 689605 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_L_1189 hypothetical protein PA3956; glyoxalase/bleomycin resistance protein/dioxygenase complement(689201..689605) Burkholderia cenocepacia AU 1054 4097306 YP_625931.1 CDS Bcen_6093 NC_008062.1 689739 691085 D PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: atc:AGR_L_1192 hypothetical transcriptional regulator in RdxA 3'region; GntR family transcriptional regulator 689739..691085 Burkholderia cenocepacia AU 1054 4097307 YP_625932.1 CDS Bcen_6094 NC_008062.1 691156 691794 R KEGG: bur:Bcep18194_A5296 DNA-directed DNA polymerase TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III, epsilon subunit complement(691156..691794) Burkholderia cenocepacia AU 1054 4097308 YP_625933.1 CDS Bcen_6095 NC_008062.1 691898 692521 D PFAM: 2',5' RNA ligase; KEGG: rso:RSc1443 ligase protein; 2',5' RNA ligase 691898..692521 Burkholderia cenocepacia AU 1054 4097309 YP_625934.1 CDS Bcen_6096 NC_008062.1 692603 693052 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5293 GCN5-related N-acetyltransferase; hypothetical protein complement(692603..693052) Burkholderia cenocepacia AU 1054 4097310 YP_625935.1 CDS Bcen_6097 NC_008062.1 693144 693647 R PFAM: NUDIX hydrolase; KEGG: bur:Bcep18194_A5292 NUDIX hydrolase; NUDIX hydrolase complement(693144..693647) Burkholderia cenocepacia AU 1054 4097367 YP_625936.1 CDS Bcen_6098 NC_008062.1 693700 694584 R PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A5291 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, NAD-binding complement(693700..694584) Burkholderia cenocepacia AU 1054 4097368 YP_625937.1 CDS Bcen_6099 NC_008062.1 694691 694969 R KEGG: bur:Bcep18194_A5290 hypothetical protein; hypothetical protein complement(694691..694969) Burkholderia cenocepacia AU 1054 4097369 YP_625938.1 CDS Bcen_6100 NC_008062.1 694966 695961 R PFAM: HEAT; PBS lyase HEAT-like repeat; KEGG: bur:Bcep18194_A5289 PBS lyase heat-like repeat protein; HEAT repeat-containing PBS lyase complement(694966..695961) Burkholderia cenocepacia AU 1054 4097370 YP_625939.1 CDS Bcen_6101 NC_008062.1 696001 696789 R PFAM: ABC transporter related; SMART: ATPase; KEGG: ppu:PP0209 nitrate ABC transporter, ATP-binding protein; ABC transporter related complement(696001..696789) Burkholderia cenocepacia AU 1054 4097371 YP_625940.1 CDS Bcen_6102 NC_008062.1 696786 697661 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_3160 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(696786..697661) Burkholderia cenocepacia AU 1054 4097372 YP_625941.1 CDS Bcen_6103 NC_008062.1 697708 699132 R KEGG: ppu:PP0207 nitrate ABC transporter, periplasmic nitrate-binding protein; nitrate ABC transporter, periplasmic nitrate-binding protein complement(697708..699132) Burkholderia cenocepacia AU 1054 4097373 YP_625942.1 CDS Bcen_6104 NC_008062.1 699254 699499 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; KEGG: bur:Bcep18194_A5288 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin, iron-sulfur binding complement(699254..699499) Burkholderia cenocepacia AU 1054 4097374 YP_625943.1 CDS Bcen_6105 NC_008062.1 699511 701250 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein-like; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A5287 fumarate reductase/succinate dehydrogenase flavoprotein-like; oxidoreductase complement(699511..701250) Burkholderia cenocepacia AU 1054 4097375 YP_625944.1 CDS Bcen_6106 NC_008062.1 701247 702017 R PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated; KEGG: bur:Bcep18194_A5286 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(701247..702017) Burkholderia cenocepacia AU 1054 4097376 YP_625945.1 CDS Bcen_6107 NC_008062.1 702313 703548 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5285 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 702313..703548 Burkholderia cenocepacia AU 1054 4097377 YP_625946.1 CDS Bcen_6108 NC_008062.1 703828 704229 D KEGG: bur:Bcep18194_A5284 hypothetical protein; hypothetical protein 703828..704229 Burkholderia cenocepacia AU 1054 4097378 YP_625947.1 CDS Bcen_6109 NC_008062.1 704343 704822 D PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: bur:Bcep18194_A5283 cytidine/deoxycytidylate deaminase, zinc-binding region; CMP/dCMP deaminase, zinc-binding 704343..704822 Burkholderia cenocepacia AU 1054 4097379 YP_625948.1 CDS ldcA NC_008062.1 704926 705864 D catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A 704926..705864 Burkholderia cenocepacia AU 1054 4097380 YP_625949.1 CDS Bcen_6111 NC_008062.1 706179 706883 D PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: bur:Bcep18194_A5281 transcriptional regulator, GntR family; GntR family transcriptional regulator 706179..706883 Burkholderia cenocepacia AU 1054 4097381 YP_625950.1 CDS Bcen_6112 NC_008062.1 707033 708517 D PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: bur:Bcep18194_A5280 permease for cytosine/purines, uracil, thiamine, allantoin transporter; permease for cytosine/purines, uracil, thiamine, allantoin 707033..708517 Burkholderia cenocepacia AU 1054 4097382 YP_625951.1 CDS Bcen_6113 NC_008062.1 708528 709319 D PFAM: Asp/Glu racemase; KEGG: bur:Bcep18194_A5279 Asp/Glu racemase; Asp/Glu racemase 708528..709319 Burkholderia cenocepacia AU 1054 4097383 YP_625952.1 CDS Bcen_6114 NC_008062.1 709505 710458 D PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_A5278 polysaccharide deacetylase; polysaccharide deacetylase 709505..710458 Burkholderia cenocepacia AU 1054 4097384 YP_625953.1 CDS Bcen_6115 NC_008062.1 710455 710976 D KEGG: bur:Bcep18194_A5277 hypothetical protein; hypothetical protein 710455..710976 Burkholderia cenocepacia AU 1054 4097385 YP_625954.1 CDS Bcen_6116 NC_008062.1 711052 712065 D catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase 711052..712065 Burkholderia cenocepacia AU 1054 4097149 YP_625955.1 CDS Bcen_6117 NC_008062.1 712062 712574 D catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 712062..712574 Burkholderia cenocepacia AU 1054 4097150 YP_625956.1 CDS Bcen_6119 NC_008062.1 712926 713336 D KEGG: bur:Bcep18194_A5270 hypothetical protein; hypothetical protein 712926..713336 Burkholderia cenocepacia AU 1054 4097152 YP_625957.1 CDS Bcen_6120 NC_008062.1 713442 714635 R PFAM: protein of unknown function DUF989; KEGG: bur:Bcep18194_A5269 protein of unknown function DUF989; hypothetical protein complement(713442..714635) Burkholderia cenocepacia AU 1054 4097153 YP_625958.1 CDS Bcen_6121 NC_008062.1 714689 715042 R PFAM: Transthyretin; KEGG: bur:Bcep18194_A5268 transthyretin; transthyretin complement(714689..715042) Burkholderia cenocepacia AU 1054 4097154 YP_625959.1 CDS Bcen_6122 NC_008062.1 715550 716962 D catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 715550..716962 Burkholderia cenocepacia AU 1054 4097155 YP_625960.1 CDS Bcen_6123 NC_008062.1 717093 718022 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5266 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(717093..718022) Burkholderia cenocepacia AU 1054 4097156 YP_625961.1 CDS Bcen_6124 NC_008062.1 718244 718453 R PFAM: protein of unknown function DUF1458; KEGG: bur:Bcep18194_A5265 protein of unknown function DUF1458; hypothetical protein complement(718244..718453) Burkholderia cenocepacia AU 1054 4097157 YP_625962.1 CDS Bcen_6125 NC_008062.1 718621 719415 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A5264 2-hydroxy-3-oxopropionate reductase; 2-hydroxy-3-oxopropionate reductase 718621..719415 Burkholderia cenocepacia AU 1054 4097158 YP_625963.1 CDS Bcen_6126 NC_008062.1 719416 719514 D KEGG: bur:Bcep18194_A5264 2-hydroxy-3-oxopropionate reductase; 2-hydroxy-3-oxopropionate reductase 719416..719514 Burkholderia cenocepacia AU 1054 4097159 YP_625964.1 CDS Bcen_6127 NC_008062.1 719581 720072 R KEGG: bur:Bcep18194_A5263 hypothetical protein; hypothetical protein complement(719581..720072) Burkholderia cenocepacia AU 1054 4097160 YP_625965.1 CDS mscL NC_008062.1 720361 720792 R homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(720361..720792) Burkholderia cenocepacia AU 1054 4097161 YP_625966.1 CDS Bcen_6129 NC_008062.1 721029 722210 R KEGG: bur:Bcep18194_A5261 TPR repeat protein; TPR repeat-containing protein complement(721029..722210) Burkholderia cenocepacia AU 1054 4097162 YP_625967.1 CDS Bcen_6130 NC_008062.1 722299 722979 R PFAM: PspA/IM30; KEGG: bur:Bcep18194_A5260 phage shock protein A, PspA; phage shock protein A, PspA complement(722299..722979) Burkholderia cenocepacia AU 1054 4097163 YP_625968.1 CDS Bcen_6131 NC_008062.1 723423 725942 D TIGRFAM: Penicillin-binding protein 1A; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: bur:Bcep18194_A5259 penicillin-binding protein 1A; penicillin-binding protein 1A 723423..725942 Burkholderia cenocepacia AU 1054 4097164 YP_625969.1 CDS Bcen_6132 NC_008062.1 726025 726459 R KEGG: bur:Bcep18194_A5258 hypothetical protein; hypothetical protein complement(726025..726459) Burkholderia cenocepacia AU 1054 4097165 YP_625970.1 CDS Bcen_6133 NC_008062.1 726605 727624 R PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: bur:Bcep18194_A5257 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent enzyme, beta subunit complement(726605..727624) Burkholderia cenocepacia AU 1054 4097166 YP_625971.1 CDS Bcen_6134 NC_008062.1 727685 728905 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase complement(727685..728905) Burkholderia cenocepacia AU 1054 4097167 YP_625972.1 CDS Bcen_6135 NC_008062.1 729010 732480 R TIGRFAM: transcription-repair coupling factor; PFAM: helicase-like; transcription factor CarD; TRCF; type III restriction enzyme, res subunit; DEAD/DEAH box helicase-like; KEGG: bur:Bcep18194_A5255 transcription-repair coupling factor; transcription-repair coupling factor complement(729010..732480) Burkholderia cenocepacia AU 1054 4097168 YP_625973.1 CDS ispD NC_008062.1 732588 733298 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 732588..733298 Burkholderia cenocepacia AU 1054 4096870 YP_625974.1 CDS ispF NC_008062.1 733328 733813 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 733328..733813 Burkholderia cenocepacia AU 1054 4096871 YP_625975.1 CDS Bcen_6138 NC_008062.1 733941 734468 R PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_A5252 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(733941..734468) Burkholderia cenocepacia AU 1054 4096872 YP_625976.1 CDS Bcen_6139 NC_008062.1 734545 735093 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin; KEGG: bte:BTH_I2092 antioxidant, AhpC/Tsa family; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(734545..735093) Burkholderia cenocepacia AU 1054 4096873 YP_625977.1 CDS Bcen_6140 NC_008062.1 735283 736644 R PFAM: ATP-binding region, ATPase-like; histidine kinase, HAMP region; histidine kinase A-like; KEGG: bur:Bcep18194_A5250 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase complement(735283..736644) Burkholderia cenocepacia AU 1054 4096874 YP_625978.1 CDS ompR NC_008062.1 736686 737420 R part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator complement(736686..737420) Burkholderia cenocepacia AU 1054 4096875 YP_625979.1 CDS Bcen_6142 NC_008062.1 737679 737957 D KEGG: bur:Bcep18194_A5248 hypothetical protein; hypothetical protein 737679..737957 Burkholderia cenocepacia AU 1054 4096876 YP_625980.1 CDS Bcen_6143 NC_008062.1 738092 739594 D KEGG: bur:Bcep18194_A5247 hypothetical protein; hypothetical protein 738092..739594 Burkholderia cenocepacia AU 1054 4096877 YP_625981.1 CDS Bcen_6144 NC_008062.1 739662 740882 D TIGRFAM: Twin-arginine translocation pathway signal; PFAM: protein of unknown function DUF1501; KEGG: bur:Bcep18194_A5246 hypothetical protein; twin-arginine translocation pathway signal 739662..740882 Burkholderia cenocepacia AU 1054 4096878 YP_625982.1 CDS Bcen_6145 NC_008062.1 740893 741795 R PFAM: Squalene/phytoene synthase; KEGG: bur:Bcep18194_A5245 squalene/phytoene synthase; squalene/phytoene synthase complement(740893..741795) Burkholderia cenocepacia AU 1054 4096879 YP_625983.1 CDS Bcen_6146 NC_008062.1 742232 742528 D KEGG: bur:Bcep18194_A5234 hypothetical protein; hypothetical protein 742232..742528 Burkholderia cenocepacia AU 1054 4096881 YP_625984.1 CDS Bcen_6147 NC_008062.1 742633 742860 R KEGG: bur:Bcep18194_A5233 hypothetical protein; hypothetical protein complement(742633..742860) Burkholderia cenocepacia AU 1054 4096882 YP_625985.1 CDS Bcen_6148 NC_008062.1 742972 744081 R PFAM: histone deacetylase superfamily; KEGG: bur:Bcep18194_A5232 histone deacetylase superfamily; histone deacetylase superfamily protein complement(742972..744081) Burkholderia cenocepacia AU 1054 4096883 YP_625986.1 CDS Bcen_6149 NC_008062.1 744096 745304 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5231 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(744096..745304) Burkholderia cenocepacia AU 1054 4096884 YP_625987.1 CDS Bcen_6150 NC_008062.1 745326 746498 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_A5230 outer membrane protein, (porin); porin complement(745326..746498) Burkholderia cenocepacia AU 1054 4096885 YP_625988.1 CDS Bcen_6151 NC_008062.1 746675 747820 D PFAM: regulatory protein, LuxR; Bacterio-opsin activator, HTH; sigma-70 region 4; Sigma-70, region 4 type 2; KEGG: bur:Bcep18194_A5229 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 746675..747820 Burkholderia cenocepacia AU 1054 4096886 YP_625989.1 CDS Bcen_6152 NC_008062.1 747934 748932 D ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 747934..748932 Burkholderia cenocepacia AU 1054 4096887 YP_625990.1 CDS Bcen_6153 NC_008062.1 749121 749570 R PFAM: regulatory protein, MarR; KEGG: bur:Bcep18194_A5227 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(749121..749570) Burkholderia cenocepacia AU 1054 4096753 YP_625991.1 CDS Bcen_6154 NC_008062.1 749633 750778 R PFAM: glycerate kinase; KEGG: bur:Bcep18194_A5226 glycerate kinase; glycerate kinase complement(749633..750778) Burkholderia cenocepacia AU 1054 4096754 YP_625992.1 CDS tig NC_008062.1 751170 752516 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 751170..752516 Burkholderia cenocepacia AU 1054 4096755 YP_625993.1 CDS clpP NC_008062.1 752657 753310 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 752657..753310 Burkholderia cenocepacia AU 1054 4096756 YP_625994.1 CDS clpX NC_008062.1 753475 754746 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 753475..754746 Burkholderia cenocepacia AU 1054 4096757 YP_625995.1 CDS Bcen_6158 NC_008062.1 754944 757367 D KEGG: bur:Bcep18194_A5222 peptidase S16, ATP-dependent protease La TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon-like; AAA ATPase, central region; ATPase associated with various cellular activities, AAA_5; SMART: ATPase; ATP-dependent protease La 754944..757367 Burkholderia cenocepacia AU 1054 4096758 YP_625996.1 CDS Bcen_6159 NC_008062.1 758083 760020 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bur:Bcep18194_A5221 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 758083..760020 Burkholderia cenocepacia AU 1054 4096761 YP_625997.1 CDS Bcen_6160 NC_008062.1 760095 760649 R PFAM: lipolytic enzyme, G-D-S-L; KEGG: bur:Bcep18194_A5220 lipolytic enzyme, G-D-S-L; lipolytic enzyme, G-D-S-L complement(760095..760649) Burkholderia cenocepacia AU 1054 4096762 YP_625998.1 CDS Bcen_6161 NC_008062.1 760762 761475 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5219 ABC transporter, ATPase subunit; ABC transporter related 760762..761475 Burkholderia cenocepacia AU 1054 4096763 YP_625999.1 CDS pgi NC_008062.1 761544 763214 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(761544..763214) Burkholderia cenocepacia AU 1054 4096764 YP_626000.1 CDS Bcen_6163 NC_008062.1 763278 764822 R PFAM: protein of unknown function UPF0031; YjeF-related protein-like; KEGG: bur:Bcep18194_A5217 hypothetical protein; hypothetical protein complement(763278..764822) Burkholderia cenocepacia AU 1054 4096765 YP_626001.1 CDS Bcen_6164 NC_008062.1 764876 766177 R PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A5216 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase complement(764876..766177) Burkholderia cenocepacia AU 1054 4096766 YP_626002.1 CDS Bcen_6165 NC_008062.1 766505 770569 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 766505..770569 Burkholderia cenocepacia AU 1054 4096767 YP_626003.1 CDS Bcen_6166 NC_008062.1 770574 771122 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5214 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 770574..771122 Burkholderia cenocepacia AU 1054 4096768 YP_626004.1 CDS Bcen_6167 NC_008062.1 771294 772076 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bur:Bcep18194_A5213 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(771294..772076) Burkholderia cenocepacia AU 1054 4096769 YP_626005.1 CDS Bcen_6168 NC_008062.1 772095 772403 R PFAM: BolA-like protein; KEGG: bur:Bcep18194_A5212 BolA-like protein; BolA-like protein complement(772095..772403) Burkholderia cenocepacia AU 1054 4096770 YP_626006.1 CDS Bcen_6169 NC_008062.1 772405 772935 R Involved in cell division; probably involved in intracellular septation; intracellular septation protein A complement(772405..772935) Burkholderia cenocepacia AU 1054 4096523 YP_626007.1 CDS Bcen_6170 NC_008062.1 773066 773497 R PFAM: Methionine sulfoxide reductase B; KEGG: bur:Bcep18194_A5210 protein-methionine-S-oxide reductase; protein-methionine-S-oxide reductase complement(773066..773497) Burkholderia cenocepacia AU 1054 4096524 YP_626008.1 CDS Bcen_6171 NC_008062.1 773542 775110 R PFAM: protein of unknown function UPF0061; KEGG: bur:Bcep18194_A5209 protein of unknown function UPF0061; hypothetical protein complement(773542..775110) Burkholderia cenocepacia AU 1054 4096525 YP_626009.1 CDS Bcen_6172 NC_008062.1 775223 776932 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 775223..776932 Burkholderia cenocepacia AU 1054 4096526 YP_626010.1 CDS Bcen_6173 NC_008062.1 777137 779221 D PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase-like; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A5207 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 777137..779221 Burkholderia cenocepacia AU 1054 4096527 YP_626011.1 CDS Bcen_6174 NC_008062.1 779271 779903 D PFAM: isochorismatase hydrolase; KEGG: bur:Bcep18194_A5206 nicotinamidase; nicotinamidase 779271..779903 Burkholderia cenocepacia AU 1054 4096528 YP_626012.1 CDS Bcen_6175 NC_008062.1 779945 781123 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 779945..781123 Burkholderia cenocepacia AU 1054 4096529 YP_626013.1 CDS Bcen_6176 NC_008062.1 781386 782786 D TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bur:Bcep18194_A5204 diguanylate cyclase (GGDEF domain); diguanylate cyclase 781386..782786 Burkholderia cenocepacia AU 1054 4096530 YP_626014.1 CDS Bcen_6177 NC_008062.1 782878 785019 R KEGG: bma:BMAA1096 lipoprotein; lipoprotein complement(782878..785019) Burkholderia cenocepacia AU 1054 4096531 YP_626015.1 CDS Bcen_6178 NC_008062.1 785923 787401 D TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bur:Bcep18194_B1598 diguanylate cyclase (GGDEF domain); diguanylate cyclase 785923..787401 Burkholderia cenocepacia AU 1054 4096532 YP_626016.1 CDS Bcen_6179 NC_008062.1 787533 788027 D PFAM: Stress responsive alpha-beta barrel; KEGG: bur:Bcep18194_A5200 hypothetical protein; stress responsive alpha-beta barrel 787533..788027 Burkholderia cenocepacia AU 1054 4096533 YP_626017.1 CDS Bcen_6180 NC_008062.1 788024 788503 D TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: thioesterase superfamily; KEGG: bur:Bcep18194_A5199 phenylacetic acid degradation-related protein; phenylacetic acid degradation-related protein 788024..788503 Burkholderia cenocepacia AU 1054 4096534 YP_626018.1 CDS Bcen_6181 NC_008062.1 788615 789631 D PFAM: Alpha/beta hydrolase fold-3; KEGG: bur:Bcep18194_A5198 esterase/lipase/thioesterase; Alpha/beta hydrolase fold-3 788615..789631 Burkholderia cenocepacia AU 1054 4096535 YP_626019.1 CDS Bcen_6182 NC_008062.1 789673 790119 D PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A5197 GCN5-related N-acetyltransferase; GCN5-related N-acetyltransferase 789673..790119 Burkholderia cenocepacia AU 1054 4096536 YP_626020.1 CDS Bcen_6183 NC_008062.1 790136 790981 R PFAM: protein of unknown function DUF833; KEGG: bur:Bcep18194_A5196 protein of unknown function DUF833; hypothetical protein complement(790136..790981) Burkholderia cenocepacia AU 1054 4096537 YP_626021.1 CDS Bcen_6184 NC_008062.1 791058 792092 R PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: bur:Bcep18194_A5195 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) complement(791058..792092) Burkholderia cenocepacia AU 1054 4096538 YP_626022.1 CDS Bcen_6185 NC_008062.1 792170 793189 D PFAM: aminodeoxychorismate lyase; KEGG: bur:Bcep18194_A5194 aminodeoxychorismate lyase; aminodeoxychorismate lyase 792170..793189 Burkholderia cenocepacia AU 1054 4096539 YP_626023.1 CDS tmk NC_008062.1 793189 793809 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 793189..793809 Burkholderia cenocepacia AU 1054 4096540 YP_626024.1 CDS Bcen_6187 NC_008062.1 793829 794857 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 793829..794857 Burkholderia cenocepacia AU 1054 4096541 YP_626025.1 CDS Bcen_6188 NC_008062.1 794999 795778 D PFAM: TatD-related deoxyribonuclease; KEGG: bur:Bcep18194_A5191 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 794999..795778 Burkholderia cenocepacia AU 1054 4096888 YP_626026.1 CDS Bcen_6189 NC_008062.1 795822 796532 D KEGG: bur:Bcep18194_A5190 ankyrin repeat protein; ankyrin repeat-containing protein 795822..796532 Burkholderia cenocepacia AU 1054 4096889 YP_626027.1 CDS Bcen_6190 NC_008062.1 796654 797010 D KEGG: bur:Bcep18194_A5189 hypothetical protein; hypothetical protein 796654..797010 Burkholderia cenocepacia AU 1054 4096890 YP_626028.1 CDS Bcen_6191 NC_008062.1 797100 798272 D PFAM: MscS Mechanosensitive ion channel; KEGG: bur:Bcep18194_A5188 MscS mechanosensitive ion channel; MscS mechanosensitive ion channel 797100..798272 Burkholderia cenocepacia AU 1054 4096891 YP_626029.1 CDS Bcen_6192 NC_008062.1 798315 799490 D KEGG: bur:Bcep18194_A5187 ATPase-like; ATPase-like 798315..799490 Burkholderia cenocepacia AU 1054 4096892 YP_626030.1 CDS Bcen_6193 NC_008062.1 799774 800838 D PFAM: glycosyl transferase, group 1; KEGG: bur:Bcep18194_A5186 glycosyl transferase, group 1; glycosyl transferase, group 1 799774..800838 Burkholderia cenocepacia AU 1054 4096893 YP_626031.1 CDS Bcen_6194 NC_008062.1 800944 801531 R KEGG: bur:Bcep18194_A5185 hypothetical protein; hypothetical protein complement(800944..801531) Burkholderia cenocepacia AU 1054 4096894 YP_626032.1 CDS Bcen_6195 NC_008062.1 801781 802230 R KEGG: bur:Bcep18194_A5184 hypothetical protein; hypothetical protein complement(801781..802230) Burkholderia cenocepacia AU 1054 4096895 YP_626033.1 CDS Bcen_6196 NC_008062.1 802512 802802 R PFAM: PsiF; KEGG: bur:Bcep18194_A5183 PsiF repeat protein; PsiF complement(802512..802802) Burkholderia cenocepacia AU 1054 4096896 YP_626034.1 CDS Bcen_6197 NC_008062.1 802998 804095 D KEGG: bur:Bcep18194_A5182 L-asparaginase, type II TIGRFAM: L-asparaginases, type II; PFAM: Asparaginase/glutaminase; L-asparaginases, type II 802998..804095 Burkholderia cenocepacia AU 1054 4096897 YP_626035.1 CDS Bcen_6198 NC_008062.1 804187 804657 R PFAM: Peptidoglycan-binding LysM; KEGG: bur:Bcep18194_A5181 peptidoglycan-binding, LysM family protein; LysM domain/BON superfamily protein complement(804187..804657) Burkholderia cenocepacia AU 1054 4096898 YP_626036.1 CDS Bcen_6199 NC_008062.1 805119 806012 R KEGG: bur:Bcep18194_A5180 2-hydroxy-3-oxopropionate reductase TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase complement(805119..806012) Burkholderia cenocepacia AU 1054 4096899 YP_626037.1 CDS Bcen_6200 NC_008062.1 806054 806863 R PFAM: Xylose isomerase-like TIM barrel; KEGG: bur:Bcep18194_A5179 hydroxypyruvate isomerase; hydroxypyruvate isomerase complement(806054..806863) Burkholderia cenocepacia AU 1054 4096900 YP_626038.1 CDS Bcen_6201 NC_008062.1 806934 808709 R catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase complement(806934..808709) Burkholderia cenocepacia AU 1054 4096901 YP_626039.1 CDS Bcen_6202 NC_008062.1 808827 809792 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5177 transcriptional regulator, LysR family; LysR family transcriptional regulator 808827..809792 Burkholderia cenocepacia AU 1054 4096902 YP_626040.1 CDS Bcen_6203 NC_008062.1 809961 810596 D Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 809961..810596 Burkholderia cenocepacia AU 1054 4096903 YP_626041.1 CDS Bcen_6204 NC_008062.1 810586 811485 D KEGG: bur:Bcep18194_A5175 transmembrane transcriptional regulator (anti-sigma factor); transmembrane anti-sigma factor 810586..811485 Burkholderia cenocepacia AU 1054 4096904 YP_626042.1 CDS rpsF NC_008062.1 811718 812092 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 811718..812092 Burkholderia cenocepacia AU 1054 4096905 YP_626043.1 CDS Bcen_6206 NC_008062.1 812133 812432 D KEGG: bur:Bcep18194_A5173 primosomal replication protein N-like; primosomal replication protein N-like 812133..812432 Burkholderia cenocepacia AU 1054 4096906 YP_626044.1 CDS rpsR NC_008062.1 812437 812712 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 812437..812712 Burkholderia cenocepacia AU 1054 4096907 YP_626045.1 CDS rplI NC_008062.1 812740 813192 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 812740..813192 Burkholderia cenocepacia AU 1054 4096966 YP_626046.1 CDS Bcen_6209 NC_008062.1 813335 814717 D unwinds double stranded DNA; replicative DNA helicase 813335..814717 Burkholderia cenocepacia AU 1054 4096967 YP_626047.1 CDS Bcen_6210 NC_008062.1 814856 815482 D PFAM: protein of unknown function DUF47; KEGG: bur:Bcep18194_A5169 protein of unknown function DUF47; hypothetical protein 814856..815482 Burkholderia cenocepacia AU 1054 4096968 YP_626048.1 CDS Bcen_6211 NC_008062.1 815493 816503 D PFAM: phosphate transporter; KEGG: bur:Bcep18194_A5168 phosphate transporter; phosphate transporter 815493..816503 Burkholderia cenocepacia AU 1054 4096969 YP_626049.1 CDS Bcen_6212 NC_008062.1 816596 817858 R PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902; KEGG: bte:BTH_II1545 ISBma3, transposase; transposase IS116/IS110/IS902 complement(816596..817858) Burkholderia cenocepacia AU 1054 4096970 YP_626050.1 CDS Bcen_6213 NC_008062.1 818099 819190 R PFAM: NLP/P60; KEGG: bur:Bcep18194_A5167 lipoprotein, NLP/P60 family; NLP/P60 complement(818099..819190) Burkholderia cenocepacia AU 1054 4096971 YP_626051.1 CDS Bcen_6214 NC_008062.1 819427 821229 R PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; KEGG: bur:Bcep18194_A5166 PhoH-like protein; PhoH-like protein complement(819427..821229) Burkholderia cenocepacia AU 1054 4096972 YP_626052.1 CDS Bcen_6215 NC_008062.1 821562 822023 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin; KEGG: bur:Bcep18194_A5165 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(821562..822023) Burkholderia cenocepacia AU 1054 4096973 YP_626053.1 CDS Bcen_6216 NC_008062.1 822133 823029 R PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_A5164 polysaccharide deacetylase; polysaccharide deacetylase complement(822133..823029) Burkholderia cenocepacia AU 1054 4096974 YP_626054.1 CDS Bcen_6217 NC_008062.1 823043 824098 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: bur:Bcep18194_A5163 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase family protein complement(823043..824098) Burkholderia cenocepacia AU 1054 4096975 YP_626055.1 CDS Bcen_6218 NC_008062.1 824095 825042 R PFAM: formyl transferase-like; KEGG: bur:Bcep18194_A5162 methionyl-tRNA formyltransferase; formyltransferase complement(824095..825042) Burkholderia cenocepacia AU 1054 4096976 YP_626056.1 CDS Bcen_6219 NC_008062.1 825039 826076 R PFAM: glycosyl transferase, family 2; KEGG: bur:Bcep18194_A5161 glycosyl transferase, family 2; glycosyl transferase family protein complement(825039..826076) Burkholderia cenocepacia AU 1054 4096977 YP_626057.1 CDS Bcen_6220 NC_008062.1 826083 827297 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bur:Bcep18194_A5160 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(826083..827297) Burkholderia cenocepacia AU 1054 4096978 YP_626058.1 CDS Bcen_6221 NC_008062.1 827365 827736 R KEGG: bur:Bcep18194_A5159 hypothetical protein; hypothetical protein complement(827365..827736) Burkholderia cenocepacia AU 1054 4096979 YP_626059.1 CDS Bcen_6222 NC_008062.1 827750 829426 R PFAM: glycosyl transferase, family 39; KEGG: bur:Bcep18194_A5158 glycosyl transferase, family 39; glycosyl transferase family protein complement(827750..829426) Burkholderia cenocepacia AU 1054 4096980 YP_626060.1 CDS Bcen_6223 NC_008062.1 829550 830005 R PFAM: protein of unknown function DUF498; KEGG: bur:Bcep18194_A5157 protein of unknown function DUF598; hypothetical protein complement(829550..830005) Burkholderia cenocepacia AU 1054 4096981 YP_626061.1 CDS Bcen_6224 NC_008062.1 830241 831479 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 830241..831479 Burkholderia cenocepacia AU 1054 4096982 YP_626062.1 CDS Bcen_6225 NC_008062.1 831533 832861 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 831533..832861 Burkholderia cenocepacia AU 1054 4096983 YP_626063.1 CDS Bcen_6226 NC_008062.1 832872 834323 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 832872..834323 Burkholderia cenocepacia AU 1054 4096984 YP_626064.1 CDS Bcen_6227 NC_008062.1 834571 835818 D PFAM: molybdopterin binding domain; MoeA-like, domain I and II; MoeA-like, domain IV; KEGG: bur:Bcep18194_A5153 molybdopterin binding protein, MoeA; MoeA-likedomain-containing protein 834571..835818 Burkholderia cenocepacia AU 1054 4097271 YP_626065.1 CDS Bcen_6228 NC_008062.1 835838 836095 D TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS; KEGG: bur:Bcep18194_A5152 molybdopterin converting factor, subunit 1; molybdopterin converting factor, subunit 1 835838..836095 Burkholderia cenocepacia AU 1054 4097272 YP_626066.1 CDS Bcen_6229 NC_008062.1 836106 836582 D PFAM: molybdopterin biosynthesis MoaE; KEGG: bur:Bcep18194_A5151 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE 836106..836582 Burkholderia cenocepacia AU 1054 4097273 YP_626067.1 CDS Bcen_6230 NC_008062.1 836650 837210 R PFAM: globin; KEGG: bur:Bcep18194_A5150 globin-like protein; globin complement(836650..837210) Burkholderia cenocepacia AU 1054 4097274 YP_626068.1 CDS Bcen_6231 NC_008062.1 837454 837969 D PFAM: protein of unknown function UPF0074; KEGG: bur:Bcep18194_A5149 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 837454..837969 Burkholderia cenocepacia AU 1054 4097275 YP_626069.1 CDS Bcen_6232 NC_008062.1 838123 840720 D PFAM: AAA ATPase, central region; Clp, N terminal; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2; SMART: ATPase; KEGG: bur:Bcep18194_A5148 AAA ATPase, ClpB; ATPase AAA-2 838123..840720 Burkholderia cenocepacia AU 1054 4097276 YP_626070.1 CDS Bcen_6233 NC_008062.1 840847 841278 R PFAM: protein of unknown function DUF937; KEGG: bur:Bcep18194_A5147 protein of unknown function DUF937; hypothetical protein complement(840847..841278) Burkholderia cenocepacia AU 1054 4097277 YP_626071.1 CDS Bcen_6234 NC_008062.1 841367 841978 R KEGG: bur:Bcep18194_A5146 hypothetical protein; hypothetical protein complement(841367..841978) Burkholderia cenocepacia AU 1054 4097278 YP_626072.1 CDS Bcen_6235 NC_008062.1 842275 842736 D PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_A5145 transcriptional regulator, MerR family; MerR family transcriptional regulator 842275..842736 Burkholderia cenocepacia AU 1054 4097279 YP_626073.1 CDS Bcen_6236 NC_008062.1 842720 843154 D PFAM: Carboxymuconolactone decarboxylase; KEGG: bur:Bcep18194_A5144 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 842720..843154 Burkholderia cenocepacia AU 1054 4097280 YP_626074.1 CDS Bcen_6237 NC_008062.1 843174 845093 R PFAM: sigma-54 factor, interaction region; helix-turn-helix, Fis-type; GAF; SMART: ATPase; KEGG: bur:Bcep18194_A5143 sigma54 specific transcriptional regulator with GAF sensor, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator complement(843174..845093) Burkholderia cenocepacia AU 1054 4097281 YP_626075.1 CDS Bcen_6238 NC_008062.1 845581 846687 D PFAM: ATP-NAD/AcoX kinase; KEGG: bur:Bcep18194_A5142 ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase 845581..846687 Burkholderia cenocepacia AU 1054 4097282 YP_626076.1 CDS Bcen_6239 NC_008062.1 846754 847530 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bur:Bcep18194_A5141 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 846754..847530 Burkholderia cenocepacia AU 1054 4097283 YP_626077.1 CDS Bcen_6240 NC_008062.1 847607 848590 D PFAM: dehydrogenase, E1 component; KEGG: bur:Bcep18194_A5140 pyruvate dehydrogenase (lipoamide); pyruvate dehydrogenase (lipoamide) 847607..848590 Burkholderia cenocepacia AU 1054 4097284 YP_626078.1 CDS Bcen_6241 NC_008062.1 848645 849649 D PFAM: Transketolase, central region; Transketolase-like; KEGG: bur:Bcep18194_A5139 acetoin/2,6-dichlorophenolindophenol oxidoreductase beta subunit; transketolase, central region 848645..849649 Burkholderia cenocepacia AU 1054 4097285 YP_626079.1 CDS Bcen_6242 NC_008062.1 849654 850769 D PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment; KEGG: bur:Bcep18194_A5138 alpha/beta hydrolase; branched-chain alpha-keto acid dehydrogenase subunit E2 849654..850769 Burkholderia cenocepacia AU 1054 4097286 YP_626080.1 CDS Bcen_6243 NC_008062.1 850772 851737 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 850772..851737 Burkholderia cenocepacia AU 1054 4097287 YP_626081.1 CDS Bcen_6244 NC_008062.1 851749 853101 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bur:Bcep18194_A5136 multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(851749..853101) Burkholderia cenocepacia AU 1054 4097288 YP_626082.1 CDS Bcen_6245 NC_008062.1 853104 854936 R KEGG: bur:Bcep18194_A5135 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-like; glycosyltransferase complement(853104..854936) Burkholderia cenocepacia AU 1054 4097289 YP_626083.1 CDS rpmE2 NC_008062.1 855081 855347 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B complement(855081..855347) Burkholderia cenocepacia AU 1054 4097290 YP_626084.1 CDS Bcen_6247 NC_008062.1 855505 856338 R PFAM: protein of unknown function DUF980; KEGG: bur:Bcep18194_A5133 protein of unknown function DUF980; hypothetical protein complement(855505..856338) Burkholderia cenocepacia AU 1054 4097386 YP_626085.1 CDS Bcen_6248 NC_008062.1 856377 857933 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5132 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(856377..857933) Burkholderia cenocepacia AU 1054 4097387 YP_626086.1 CDS Bcen_6249 NC_008062.1 857930 858430 R PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_A5131 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(857930..858430) Burkholderia cenocepacia AU 1054 4097388 YP_626087.1 CDS rho NC_008062.1 858559 859821 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(858559..859821) Burkholderia cenocepacia AU 1054 4097389 YP_626088.1 CDS Bcen_6251 NC_008062.1 860016 860342 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bur:Bcep18194_A5129 thioredoxin; thioredoxin complement(860016..860342) Burkholderia cenocepacia AU 1054 4097390 YP_626089.1 CDS Bcen_6252 NC_008062.1 860959 863322 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 860959..863322 Burkholderia cenocepacia AU 1054 4097392 YP_626090.1 CDS Bcen_6253 NC_008062.1 863418 863744 D PFAM: conserved hypothetical protein 103; KEGG: bur:Bcep18194_A5127 hypothetical protein; hypothetical protein 863418..863744 Burkholderia cenocepacia AU 1054 4097393 YP_626091.1 CDS recR NC_008062.1 863776 864372 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 863776..864372 Burkholderia cenocepacia AU 1054 4097394 YP_626092.1 CDS Bcen_6255 NC_008062.1 864421 865626 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_A5125 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 864421..865626 Burkholderia cenocepacia AU 1054 4097395 YP_626093.1 CDS surE NC_008062.1 865847 866608 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 865847..866608 Burkholderia cenocepacia AU 1054 4097396 YP_626094.1 CDS Bcen_6257 NC_008062.1 866605 867537 D KEGG: bur:Bcep18194_A5123 protein-L-isoaspartate(D-aspartate) O-methyltransferase TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 866605..867537 Burkholderia cenocepacia AU 1054 4097397 YP_626095.1 CDS Bcen_6258 NC_008062.1 867543 868433 D PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bur:Bcep18194_A5122 peptidase M23B; peptidase M23B 867543..868433 Burkholderia cenocepacia AU 1054 4097398 YP_626096.1 CDS Bcen_6259 NC_008062.1 868445 869533 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 868445..869533 Burkholderia cenocepacia AU 1054 4097399 YP_626097.1 CDS Bcen_6260 NC_008062.1 869537 870313 D KEGG: bur:Bcep18194_A5120 3'-5' exonuclease related to the exonuclease domain of PolB; 3'-5' exonuclease 869537..870313 Burkholderia cenocepacia AU 1054 4097400 YP_626098.1 CDS Bcen_6261 NC_008062.1 870344 871198 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bur:Bcep18194_A5119 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(870344..871198) Burkholderia cenocepacia AU 1054 4097401 YP_626099.1 CDS rumA NC_008062.1 871427 872824 D in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 871427..872824 Burkholderia cenocepacia AU 1054 4097402 YP_626100.1 CDS Bcen_6263 NC_008062.1 872887 873585 R PFAM: protein of unknown function UPF0005; KEGG: bur:Bcep18194_A5117 protein of unknown function UPF0005; hypothetical protein complement(872887..873585) Burkholderia cenocepacia AU 1054 4097403 YP_626101.1 CDS ndk NC_008062.1 873835 874260 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 873835..874260 Burkholderia cenocepacia AU 1054 4097109 YP_626102.1 CDS Bcen_6265 NC_008062.1 874316 875455 D TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM; KEGG: bur:Bcep18194_A5115 hypothetical protein; hypothetical protein 874316..875455 Burkholderia cenocepacia AU 1054 4097110 YP_626103.1 CDS Bcen_6266 NC_008062.1 875619 876635 D SMART: Helix-turn-helix type 3; KEGG: bur:Bcep18194_A5114 transcriptional regulator, XRE family; XRE family transcriptional regulator 875619..876635 Burkholderia cenocepacia AU 1054 4097111 YP_626104.1 CDS ispG NC_008062.1 876736 878052 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 876736..878052 Burkholderia cenocepacia AU 1054 4097112 YP_626105.1 CDS hisS NC_008062.1 878073 879413 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 878073..879413 Burkholderia cenocepacia AU 1054 4097113 YP_626106.1 CDS Bcen_6269 NC_008062.1 879472 880101 D KEGG: bur:Bcep18194_A5111 hypothetical protein; hypothetical protein 879472..880101 Burkholderia cenocepacia AU 1054 4097114 YP_626107.1 CDS Bcen_6270 NC_008062.1 880143 881288 D PFAM: Pyrrolo-quinoline quinone; KEGG: bur:Bcep18194_A5110 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 880143..881288 Burkholderia cenocepacia AU 1054 4097115 YP_626108.1 CDS engA NC_008062.1 881536 882873 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 881536..882873 Burkholderia cenocepacia AU 1054 4097116 YP_626109.1 CDS hfq NC_008062.1 883015 883254 D Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 883015..883254 Burkholderia cenocepacia AU 1054 4097117 YP_626110.1 CDS Bcen_6274 NC_008062.1 884545 885933 D TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: bur:Bcep18194_A5106 membrane protein, HflK; HflK protein 884545..885933 Burkholderia cenocepacia AU 1054 4097119 YP_626111.1 CDS Bcen_6275 NC_008062.1 885949 886848 D TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: bur:Bcep18194_A5105 membrane protein, HflC; HflC protein 885949..886848 Burkholderia cenocepacia AU 1054 4097120 YP_626112.1 CDS Bcen_6276 NC_008062.1 886885 887076 D KEGG: bur:Bcep18194_A5104 hypothetical protein; hypothetical protein 886885..887076 Burkholderia cenocepacia AU 1054 4097121 YP_626113.1 CDS hisZ NC_008062.1 887189 888337 D May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 887189..888337 Burkholderia cenocepacia AU 1054 4097122 YP_626114.1 CDS Bcen_6278 NC_008062.1 888451 889797 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 888451..889797 Burkholderia cenocepacia AU 1054 4097123 YP_626115.1 CDS Bcen_6279 NC_008062.1 889805 890401 D PFAM: phosphoribosyltransferase; KEGG: bur:Bcep18194_A5101 phosphoribosyltransferase; phosphoribosyltransferase 889805..890401 Burkholderia cenocepacia AU 1054 4097124 YP_626116.1 CDS Bcen_6280 NC_008062.1 890527 892593 D PFAM: K+ potassium transporter; KEGG: bur:Bcep18194_A5100 K+ transporter; K+ potassium transporter 890527..892593 Burkholderia cenocepacia AU 1054 4097125 YP_626117.1 CDS Bcen_6281 NC_008062.1 892682 895129 R PFAM: RNA binding S1; SMART: Resolvase, RNase H-like fold; KEGG: bur:Bcep18194_A5099 RNA binding S1; RNA binding S1 complement(892682..895129) Burkholderia cenocepacia AU 1054 4097126 YP_626118.1 CDS Bcen_6282 NC_008062.1 895171 895923 D KEGG: bur:Bcep18194_A5098 hypothetical protein; hypothetical protein 895171..895923 Burkholderia cenocepacia AU 1054 4097127 YP_626119.1 CDS Bcen_6283 NC_008062.1 896000 896215 D PFAM: protein of unknown function DUF465; KEGG: bur:Bcep18194_A5097 hypothetical protein; hypothetical protein 896000..896215 Burkholderia cenocepacia AU 1054 4097128 YP_626120.1 CDS Bcen_6284 NC_008062.1 896271 898520 D SMART: Helicase c2; KEGG: bur:Bcep18194_A5096 helicase C2; helicase c2 896271..898520 Burkholderia cenocepacia AU 1054 4096715 YP_626121.1 CDS Bcen_6285 NC_008062.1 898641 899465 R KEGG: bur:Bcep18194_A5095 DNA uptake lipoprotein-like; DNA uptake lipoprotein-like complement(898641..899465) Burkholderia cenocepacia AU 1054 4096716 YP_626122.1 CDS Bcen_6286 NC_008062.1 899507 900715 D KEGG: bur:Bcep18194_A5094 pseudouridine synthase, RluD TIGRFAM: Pseudouridine synthase, RluD; PFAM: RNA-binding S4; pseudouridine synthase; pseudouridine synthase, RluD 899507..900715 Burkholderia cenocepacia AU 1054 4096717 YP_626123.1 CDS Bcen_6287 NC_008062.1 900722 901561 D PFAM: protein of unknown function DUF152; KEGG: bur:Bcep18194_A5093 protein of unknown function DUF152; hypothetical protein 900722..901561 Burkholderia cenocepacia AU 1054 4096718 YP_626124.1 CDS Bcen_6288 NC_008062.1 901919 903784 D TIGRFAM: Poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase-like; KEGG: bur:Bcep18194_A5092 poly(R)-hydroxyalkanoic acid synthase, class I; Poly(R)-hydroxyalkanoic acid synthase, class I 901919..903784 Burkholderia cenocepacia AU 1054 4096719 YP_626125.1 CDS Bcen_6289 NC_008062.1 903884 905065 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 903884..905065 Burkholderia cenocepacia AU 1054 4096720 YP_626126.1 CDS Bcen_6290 NC_008062.1 905200 905940 D catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; acetyacetyl-CoA reductase 905200..905940 Burkholderia cenocepacia AU 1054 4096721 YP_626127.1 CDS Bcen_6291 NC_008062.1 906060 906626 D TIGRFAM: Polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory; PHA accumulation regulator DNA-binding-like; KEGG: bur:Bcep18194_A5089 polyhydroxyalkanoate synthesis repressor PhaR; polyhydroxyalkonate synthesis repressor, PhaR 906060..906626 Burkholderia cenocepacia AU 1054 4096722 YP_626128.1 CDS Bcen_6292 NC_008062.1 907039 907881 D KEGG: bur:Bcep18194_A5088 hypothetical protein; hypothetical protein 907039..907881 Burkholderia cenocepacia AU 1054 4096723 YP_626129.1 CDS Bcen_6293 NC_008062.1 908090 908413 D KEGG: bur:Bcep18194_A5087 FAD dependent oxidoreductase; FAD dependent oxidoreductase 908090..908413 Burkholderia cenocepacia AU 1054 4096724 YP_626130.1 CDS Bcen_6294 NC_008062.1 908530 909063 D PFAM: bifunctional deaminase-reductase-like; KEGG: bur:Bcep18194_A5086 bifunctional deaminase-reductase-like; bifunctional deaminase-reductase-like 908530..909063 Burkholderia cenocepacia AU 1054 4096725 YP_626131.1 CDS Bcen_6295 NC_008062.1 909148 909402 R KEGG: bur:Bcep18194_A5085 hypothetical protein; hypothetical protein complement(909148..909402) Burkholderia cenocepacia AU 1054 4096726 YP_626132.1 CDS Bcen_6296 NC_008062.1 909547 909810 R KEGG: bcz:BCZK4811 hypothetical protein; hypothetical protein complement(909547..909810) Burkholderia cenocepacia AU 1054 4096727 YP_626133.1 CDS rimO NC_008062.1 910369 911730 D catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 910369..911730 Burkholderia cenocepacia AU 1054 4096728 YP_626134.1 CDS Bcen_6298 NC_008062.1 911734 912660 D PFAM: PfkB; KEGG: bur:Bcep18194_A5081 sugar kinase, ribokinase family; PfkB 911734..912660 Burkholderia cenocepacia AU 1054 4096729 YP_626135.1 CDS Bcen_6299 NC_008062.1 912779 913321 D KEGG: bur:Bcep18194_A5079 hypothetical protein; hypothetical protein 912779..913321 Burkholderia cenocepacia AU 1054 4096730 YP_626136.1 CDS Bcen_6300 NC_008062.1 913436 914617 D catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 913436..914617 Burkholderia cenocepacia AU 1054 4096731 YP_626137.1 CDS Bcen_6301 NC_008062.1 914705 915655 R KEGG: bur:Bcep18194_A5077 phosphoserine phosphatase SerB TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase; phosphoserine phosphatase SerB complement(914705..915655) Burkholderia cenocepacia AU 1054 4096732 YP_626138.1 CDS Bcen_6302 NC_008062.1 915719 916669 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5076 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(915719..916669) Burkholderia cenocepacia AU 1054 4096733 YP_626139.1 CDS Bcen_6303 NC_008062.1 916795 917811 D PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: bur:Bcep18194_A5075 zinc-containing alcohol dehydrogenase superfamily; zinc-binding alcohol dehydrogenase 916795..917811 Burkholderia cenocepacia AU 1054 4096946 YP_626140.1 CDS Bcen_6304 NC_008062.1 917864 918520 D KEGG: bur:Bcep18194_A5074 hypothetical protein; hypothetical protein 917864..918520 Burkholderia cenocepacia AU 1054 4096947 YP_626141.1 CDS Bcen_6305 NC_008062.1 918793 919596 R PFAM: conserved hypothetical protein 245; KEGG: bur:Bcep18194_A5072 ABC transporter, inner membrane subunit; hypothetical protein complement(918793..919596) Burkholderia cenocepacia AU 1054 4096948 YP_626142.1 CDS Bcen_6306 NC_008062.1 919593 920294 R PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5071 ABC transporter, ATPase subunit; ABC transporter related complement(919593..920294) Burkholderia cenocepacia AU 1054 4096949 YP_626143.1 CDS Bcen_6307 NC_008062.1 920447 922744 D PFAM: AsmA; KEGG: bur:Bcep18194_A5070 uncharacterized protein involved in outer membrane biogenesis, AsmA; AsmA 920447..922744 Burkholderia cenocepacia AU 1054 4096950 YP_626144.1 CDS Bcen_6308 NC_008062.1 922842 923294 R KEGG: bur:Bcep18194_A5069 hypothetical protein; hypothetical protein complement(922842..923294) Burkholderia cenocepacia AU 1054 4096951 YP_626145.1 CDS Bcen_6309 NC_008062.1 923464 925056 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A5068 ABC transporter, fused ATPase subunits; ABC transporter related 923464..925056 Burkholderia cenocepacia AU 1054 4096952 YP_626146.1 CDS Bcen_6310 NC_008062.1 925292 926041 D KEGG: bur:Bcep18194_A5067 hypothetical protein; hypothetical protein 925292..926041 Burkholderia cenocepacia AU 1054 4096953 YP_626147.1 CDS Bcen_6311 NC_008062.1 926042 927040 D PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_A5066 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 926042..927040 Burkholderia cenocepacia AU 1054 4096954 YP_626148.1 CDS Bcen_6312 NC_008062.1 927042 927920 D KEGG: bur:Bcep18194_A5065 hypothetical protein; hypothetical protein 927042..927920 Burkholderia cenocepacia AU 1054 4096955 YP_626149.1 CDS Bcen_6313 NC_008062.1 927917 928984 D PFAM: asparagine synthase; KEGG: bur:Bcep18194_A5064 asparagine synthase; asparagine synthase 927917..928984 Burkholderia cenocepacia AU 1054 4096956 YP_626150.1 CDS Bcen_6314 NC_008062.1 928992 930200 D TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyltransferase 28-like; KEGG: bur:Bcep18194_A5063 UDP-glycosyltransferase, MGT; glycosyl transferase family protein 928992..930200 Burkholderia cenocepacia AU 1054 4096957 YP_626151.1 CDS Bcen_6315 NC_008062.1 930157 930846 R PFAM: Cephalosporin hydroxylase; KEGG: bur:Bcep18194_A5062 cephalosporin hydroxylase; cephalosporin hydroxylase complement(930157..930846) Burkholderia cenocepacia AU 1054 4096958 YP_626152.1 CDS Bcen_6316 NC_008062.1 930872 931837 D PFAM: aminoglycoside phosphotransferase; KEGG: bur:Bcep18194_A5061 hypothetical protein; aminoglycoside phosphotransferase 930872..931837 Burkholderia cenocepacia AU 1054 4096959 YP_626153.1 CDS Bcen_6317 NC_008062.1 931834 932430 R PFAM: polysaccharide deacetylase; KEGG: bur:Bcep18194_A5060 polysaccharide deacetylase; polysaccharide deacetylase complement(931834..932430) Burkholderia cenocepacia AU 1054 4096960 YP_626154.1 CDS Bcen_6318 NC_008062.1 932447 932959 R KEGG: bur:Bcep18194_A5059 hypothetical protein; hypothetical protein complement(932447..932959) Burkholderia cenocepacia AU 1054 4096961 YP_626155.1 CDS Bcen_6319 NC_008062.1 933296 933784 D KEGG: bur:Bcep18194_A5057 hypothetical protein; hypothetical protein 933296..933784 Burkholderia cenocepacia AU 1054 4096962 YP_626156.1 CDS Bcen_6320 NC_008062.1 933940 934305 R KEGG: bur:Bcep18194_A5056 hypothetical protein; hypothetical protein complement(933940..934305) Burkholderia cenocepacia AU 1054 4096963 YP_626157.1 CDS Bcen_6321 NC_008062.1 934574 936010 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_A5054 aldehyde dehydrogenase; aldehyde dehydrogenase 934574..936010 Burkholderia cenocepacia AU 1054 4096964 YP_626158.1 CDS Bcen_6322 NC_008062.1 936136 937326 D PFAM: 2-nitropropane dioxygenase, NPD; KEGG: bur:Bcep18194_A5053 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase, NPD 936136..937326 Burkholderia cenocepacia AU 1054 4096965 YP_626159.1 CDS Bcen_6323 NC_008062.1 937392 938030 D PFAM: OmpW; KEGG: bur:Bcep18194_A5052 OmpW family protein; OmpW 937392..938030 Burkholderia cenocepacia AU 1054 4097348 YP_626160.1 CDS Bcen_6324 NC_008062.1 938101 940593 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: ecj:JW3183 predicted outer membrane protein; fimbrial biogenesis outer membrane usher protein complement(938101..940593) Burkholderia cenocepacia AU 1054 4097349 YP_626161.1 CDS Bcen_6325 NC_008062.1 940574 941311 R member of the periplasmic pilus chaperone family of proteins; periplasmic chaperone protein complement(940574..941311) Burkholderia cenocepacia AU 1054 4097350 YP_626162.1 CDS Bcen_6326 NC_008062.1 941426 942106 R PFAM: protein of unknown function DUF1120; KEGG: stm:STM4574 outer membrane protein; hypothetical protein complement(941426..942106) Burkholderia cenocepacia AU 1054 4097351 YP_626163.1 CDS Bcen_6327 NC_008062.1 942713 942916 R PFAM: protein of unknown function DUF1289; KEGG: bur:Bcep18194_A5051 protein of unknown function DUF1289; hypothetical protein complement(942713..942916) Burkholderia cenocepacia AU 1054 4097352 YP_626164.1 CDS Bcen_6328 NC_008062.1 943336 944430 D PFAM: extracellular solute-binding protein, family 1; KEGG: bur:Bcep18194_A5050 ABC spermidine/putrescine transporter, periplasmic ligand binding protein; extracellular solute-binding protein 943336..944430 Burkholderia cenocepacia AU 1054 4097353 YP_626165.1 CDS Bcen_6329 NC_008062.1 944517 945677 D KEGG: bur:Bcep18194_A5049 spermidine/putrescine ABC transporter, ATPase subunit TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB; SMART: ATPase; spermidine/putrescine ABC transporter ATP-binding subunit 944517..945677 Burkholderia cenocepacia AU 1054 4097354 YP_626166.1 CDS Bcen_6330 NC_008062.1 945674 946600 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5048 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 945674..946600 Burkholderia cenocepacia AU 1054 4097355 YP_626167.1 CDS Bcen_6331 NC_008062.1 946597 947418 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5047 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 946597..947418 Burkholderia cenocepacia AU 1054 4097356 YP_626168.1 CDS Bcen_6332 NC_008062.1 947523 948329 R PFAM: protein of unknown function DUF81; KEGG: bur:Bcep18194_A5045 protein of unknown function DUF81; hypothetical protein complement(947523..948329) Burkholderia cenocepacia AU 1054 4097357 YP_626169.1 CDS Bcen_6333 NC_008062.1 948348 950018 R PFAM: protein of unknown function DUF442; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A5044 hypothetical protein; hypothetical protein complement(948348..950018) Burkholderia cenocepacia AU 1054 4097358 YP_626170.1 CDS Bcen_6334 NC_008062.1 950047 950931 R PFAM: beta-lactamase-like; KEGG: bur:Bcep18194_A5043 beta-lactamase-like; beta-lactamase-like complement(950047..950931) Burkholderia cenocepacia AU 1054 4097359 YP_626171.1 CDS Bcen_6335 NC_008062.1 951185 952567 D PFAM: sigma-54 factor, interaction region; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; PAS fold-4; PAS fold; SMART: PAS; ATPase; KEGG: bur:Bcep18194_A5042 sigma54 specific transcriptional regulator with PAS sensor, fis family; sigma-54 dependent trancsriptional regulator 951185..952567 Burkholderia cenocepacia AU 1054 4097360 YP_626172.1 CDS Bcen_6336 NC_008062.1 952606 953175 D KEGG: bur:Bcep18194_A5041 hypothetical protein; hypothetical protein 952606..953175 Burkholderia cenocepacia AU 1054 4097361 YP_626173.1 CDS Bcen_6337 NC_008062.1 953269 954297 R PFAM: regulatory protein, MerR; Albicidin resistance; KEGG: bur:Bcep18194_A5038 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(953269..954297) Burkholderia cenocepacia AU 1054 4097362 YP_626174.1 CDS Bcen_6338 NC_008062.1 954423 955991 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_A5037 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system, outer membrane lipoprotein, NodT complement(954423..955991) Burkholderia cenocepacia AU 1054 4097363 YP_626175.1 CDS Bcen_6339 NC_008062.1 955994 959143 R PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_A5036 acriflavin resistance protein; acriflavin resistance protein complement(955994..959143) Burkholderia cenocepacia AU 1054 4097364 YP_626176.1 CDS Bcen_6340 NC_008062.1 959140 960249 R PFAM: secretion protein HlyD; KEGG: bur:Bcep18194_A5035 secretion protein HlyD family; secretion protein HlyD complement(959140..960249) Burkholderia cenocepacia AU 1054 4097365 YP_626177.1 CDS Bcen_6341 NC_008062.1 960438 961058 D PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_A5034 transcriptional regulator, TetR family; TetR family transcriptional regulator 960438..961058 Burkholderia cenocepacia AU 1054 4097366 YP_626178.1 CDS Bcen_6342 NC_008062.1 961095 962864 R PFAM: CBS; Cl- channel, voltage gated; KEGG: bur:Bcep18194_A5033 Cl-channel, voltage gated; voltage-gated ClC-type chloride channel ClcB complement(961095..962864) Burkholderia cenocepacia AU 1054 4097000 YP_626179.1 CDS Bcen_6343 NC_008062.1 962944 964029 R PFAM: conserved hypothetical protein 698; KEGG: bur:Bcep18194_A5032 hypothetical protein; hypothetical protein complement(962944..964029) Burkholderia cenocepacia AU 1054 4097001 YP_626180.1 CDS Bcen_6344 NC_008062.1 964141 965034 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A5031 transcriptional regulator, LysR family; LysR family transcriptional regulator 964141..965034 Burkholderia cenocepacia AU 1054 4097002 YP_626181.1 CDS Bcen_6345 NC_008062.1 965117 965959 D PFAM: Xylose isomerase-like TIM barrel; KEGG: bur:Bcep18194_A5030 xylose isomerase-like TIM barrel; xylose isomerase-like TIM barrel 965117..965959 Burkholderia cenocepacia AU 1054 4097003 YP_626182.1 CDS Bcen_6346 NC_008062.1 965996 966988 D PFAM: PfkB; KEGG: bur:Bcep18194_A5029 sugar kinase, ribokinase family; PfkB 965996..966988 Burkholderia cenocepacia AU 1054 4097004 YP_626183.1 CDS Bcen_6347 NC_008062.1 967104 968384 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5028 major facilitator superfamily (MFS_1) transporter; major facilitator transporter 967104..968384 Burkholderia cenocepacia AU 1054 4097005 YP_626184.1 CDS Bcen_6348 NC_008062.1 968389 969354 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bur:Bcep18194_A5027 gluconate 2-dehydrogenase; gluconate 2-dehydrogenase 968389..969354 Burkholderia cenocepacia AU 1054 4097006 YP_626185.1 CDS Bcen_6349 NC_008062.1 969687 970730 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bur:Bcep18194_A5026 transcriptional regulator, LacI family; LacI family transcription regulator 969687..970730 Burkholderia cenocepacia AU 1054 4097007 YP_626186.1 CDS Bcen_6350 NC_008062.1 970786 971574 D KEGG: bur:Bcep18194_A5025 membrane protein; membrane protein 970786..971574 Burkholderia cenocepacia AU 1054 4097008 YP_626187.1 CDS Bcen_6351 NC_008062.1 971587 971949 D KEGG: bur:Bcep18194_A5024 hypothetical protein; hypothetical protein 971587..971949 Burkholderia cenocepacia AU 1054 4097009 YP_626188.1 CDS Bcen_6352 NC_008062.1 971989 972420 R KEGG: bur:Bcep18194_A5023 hypothetical protein; hypothetical protein complement(971989..972420) Burkholderia cenocepacia AU 1054 4097010 YP_626189.1 CDS Bcen_6353 NC_008062.1 972539 973081 R KEGG: bur:Bcep18194_A5022 hypothetical protein; hypothetical protein complement(972539..973081) Burkholderia cenocepacia AU 1054 4097011 YP_626190.1 CDS Bcen_6354 NC_008062.1 973330 973794 D PFAM: regulatory proteins, AsnC/Lrp; KEGG: bur:Bcep18194_A5021 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 973330..973794 Burkholderia cenocepacia AU 1054 4097012 YP_626191.1 CDS Bcen_6355 NC_008062.1 974291 975391 D PFAM: TrkA-N; Saccharopine dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase-like; KEGG: bur:Bcep18194_A5016 saccharopine dehydrogenase; saccharopine dehydrogenase 974291..975391 Burkholderia cenocepacia AU 1054 4097013 YP_626192.1 CDS Bcen_6356 NC_008062.1 975508 976047 R KEGG: bur:Bcep18194_A5015 hypothetical protein; hypothetical protein complement(975508..976047) Burkholderia cenocepacia AU 1054 4097014 YP_626193.1 CDS Bcen_6357 NC_008062.1 976122 976268 R TIGRFAM: Cyd operon protein YbgT; PFAM: membrane bound YbgT-like; KEGG: bur:Bcep18194_A5014 Cyd operon protein YbgT; Cyd operon protein YbgT complement(976122..976268) Burkholderia cenocepacia AU 1054 4097015 YP_626194.1 CDS Bcen_6358 NC_008062.1 976469 977446 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; KEGG: bur:Bcep18194_A5013 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 976469..977446 Burkholderia cenocepacia AU 1054 4097016 YP_626195.1 CDS Bcen_6359 NC_008062.1 977454 977747 R unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein complement(977454..977747) Burkholderia cenocepacia AU 1054 4097017 YP_626196.1 CDS Bcen_6360 NC_008062.1 978214 978702 D PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bur:Bcep18194_A5009 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated region 978214..978702 Burkholderia cenocepacia AU 1054 4097018 YP_626197.1 CDS Bcen_6361 NC_008062.1 979561 980262 D TIGRFAM: TonB-like; PFAM: Gram-negative tonB protein; KEGG: bur:Bcep18194_A5008 TonB-like protein; TonB-like 979561..980262 Burkholderia cenocepacia AU 1054 4097019 YP_626198.1 CDS Bcen_6362 NC_008062.1 980349 981260 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: bur:Bcep18194_A5007 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 980349..981260 Burkholderia cenocepacia AU 1054 4096908 YP_626199.1 CDS Bcen_6363 NC_008062.1 981281 981703 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bur:Bcep18194_A5006 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 981281..981703 Burkholderia cenocepacia AU 1054 4096909 YP_626200.1 CDS Bcen_6364 NC_008062.1 981902 982333 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bur:Bcep18194_A5005 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 981902..982333 Burkholderia cenocepacia AU 1054 4096910 YP_626201.1 CDS Bcen_6365 NC_008062.1 982350 983540 D KEGG: bur:Bcep18194_A5004 hypothetical protein; hypothetical protein 982350..983540 Burkholderia cenocepacia AU 1054 4096911 YP_626202.1 CDS Bcen_6366 NC_008062.1 983843 984418 D PFAM: helix-turn-helix motif; Cupin 2, conserved barrel; KEGG: bur:Bcep18194_A5003 transcriptional regulator, XRE family with cupin sensor domain; XRE family transcriptional regulator 983843..984418 Burkholderia cenocepacia AU 1054 4096912 YP_626203.1 CDS Bcen_6367 NC_008062.1 984765 987590 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bur:Bcep18194_C7317 TonB-dependent receptor; TonB-dependent receptor 984765..987590 Burkholderia cenocepacia AU 1054 4096913 YP_626204.1 CDS Bcen_6368 NC_008062.1 987831 989705 D PFAM: extracellular solute-binding protein, family 5; KEGG: bur:Bcep18194_A5001 ABC transporter, periplasmic ligand binding protein; extracellular solute-binding protein 987831..989705 Burkholderia cenocepacia AU 1054 4096914 YP_626205.1 CDS Bcen_6369 NC_008062.1 989718 990770 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A5000 ABC transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 989718..990770 Burkholderia cenocepacia AU 1054 4096915 YP_626206.1 CDS Bcen_6370 NC_008062.1 990874 991827 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4999 ABC transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 990874..991827 Burkholderia cenocepacia AU 1054 4096916 YP_626207.1 CDS Bcen_6371 NC_008062.1 991827 993461 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_A4998 ABC transporter, ATPase subunit; ABC transporter related 991827..993461 Burkholderia cenocepacia AU 1054 4096917 YP_626208.1 CDS Bcen_6372 NC_008062.1 993568 996747 D TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: acriflavin resistance protein; KEGG: bur:Bcep18194_A4995 hydrophobe/amphiphile efflux-1 pump, HAE1; hydrophobe/amphiphile efflux-1 HAE1 993568..996747 Burkholderia cenocepacia AU 1054 4096918 YP_626209.1 CDS Bcen_6373 NC_008062.1 997571 1000291 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bur:Bcep18194_C7317 TonB-dependent receptor; TonB-dependent receptor 997571..1000291 Burkholderia cenocepacia AU 1054 4096919 YP_626210.1 CDS Bcen_6375 NC_008062.1 1001055 1001771 D PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: bbr:BB4721 GntR-family transcriptional regulator; GntR family transcriptional regulator 1001055..1001771 Burkholderia cenocepacia AU 1054 4096921 YP_626211.1 CDS Bcen_6376 NC_008062.1 1001762 1003021 R TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation; KEGG: rso:RSc3273 hypothetical protein; acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase complement(1001762..1003021) Burkholderia cenocepacia AU 1054 4096922 YP_626212.1 CDS Bcen_6377 NC_008062.1 1003107 1003844 R PFAM: SMC protein-like; ABC transporter related; SMART: ATPase; KEGG: ctc:CTC00560 glutamine transport ATP-binding protein glnQ; ABC transporter related complement(1003107..1003844) Burkholderia cenocepacia AU 1054 4096923 YP_626213.1 CDS Bcen_6378 NC_008062.1 1003822 1004511 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0081 ABC transporter permease; amino acid ABC transporter permease complement(1003822..1004511) Burkholderia cenocepacia AU 1054 4096924 YP_626214.1 CDS Bcen_6379 NC_008062.1 1004511 1005179 R TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0079 ABC transporter permease; amino acid ABC transporter permease complement(1004511..1005179) Burkholderia cenocepacia AU 1054 4096925 YP_626215.1 CDS Bcen_6380 NC_008062.1 1005185 1006009 R PFAM: extracellular solute-binding protein, family 3; KEGG: bja:bll3977 ABC transporter substrate-binding protein; extracellular solute-binding protein complement(1005185..1006009) Burkholderia cenocepacia AU 1054 4096926 YP_626216.1 CDS Bcen_6381 NC_008062.1 1006138 1006461 D KEGG: tko:TK0119 proline dehydrogenase, alpha subunit; hypothetical protein 1006138..1006461 Burkholderia cenocepacia AU 1054 4096466 YP_626217.1 CDS Bcen_6382 NC_008062.1 1006454 1007878 D PFAM: HI0933-like protein; BFD-like [2Fe-2S]-binding region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: psb:Psyr_2331 FAD-dependent pyridine nucleotide-disulphide oxidoreductase:BFD-like [2Fe-2S]-binding region; BFD-like (2Fe-2S)-binding region 1006454..1007878 Burkholderia cenocepacia AU 1054 4096467 YP_626218.1 CDS Bcen_6383 NC_008062.1 1007875 1009044 D PFAM: FAD dependent oxidoreductase; KEGG: bja:bll7190 sarcosine oxidase beta subunit; FAD dependent oxidoreductase 1007875..1009044 Burkholderia cenocepacia AU 1054 4096468 YP_626219.1 CDS Bcen_6384 NC_008062.1 1009041 1009997 D PFAM: dihydrodipicolinate synthetase; KEGG: bja:blr3312 hypothetical protein; dihydrodipicolinate synthetase 1009041..1009997 Burkholderia cenocepacia AU 1054 4096469 YP_626220.1 CDS Bcen_6385 NC_008062.1 1009994 1011421 D KEGG: sco:SCO6415 D-hydantoinase TIGRFAM: D-hydantoinase; PFAM: amidohydrolase; Amidohydrolase 3; D-hydantoinase 1009994..1011421 Burkholderia cenocepacia AU 1054 4096470 YP_626221.1 CDS Bcen_6386 NC_008062.1 1011429 1011653 D TIGRFAM: regulatory protein, FmdB; KEGG: bpe:BP1514 hypothetical protein; FmdB transcriptional regulator 1011429..1011653 Burkholderia cenocepacia AU 1054 4096471 YP_626222.1 CDS Bcen_6387 NC_008062.1 1011956 1014001 D KEGG: mlo:mlr3749 transketolase TIGRFAM: transketolase; PFAM: Transketolase-like; Transketolase, central region; transketolase 1011956..1014001 Burkholderia cenocepacia AU 1054 4096472 YP_626223.1 CDS Bcen_6388 NC_008062.1 1014134 1014448 D KEGG: bur:Bcep18194_C7097 hypothetical protein; hypothetical protein 1014134..1014448 Burkholderia cenocepacia AU 1054 4096473 YP_626224.1 CDS Bcen_6389 NC_008062.1 1014561 1015754 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_C7084 outer membrane protein (porin); porin complement(1014561..1015754) Burkholderia cenocepacia AU 1054 4096474 YP_626225.1 CDS Bcen_6390 NC_008062.1 1015898 1017301 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reu:Reut_D6469 benzoate transport; major facilitator transporter complement(1015898..1017301) Burkholderia cenocepacia AU 1054 4096475 YP_626226.1 CDS Bcen_6391 NC_008062.1 1017467 1018792 R PFAM: FAD dependent oxidoreductase; KEGG: bja:bll2633 hypothetical protein; FAD dependent oxidoreductase complement(1017467..1018792) Burkholderia cenocepacia AU 1054 4096476 YP_626227.1 CDS Bcen_6392 NC_008062.1 1018827 1019291 R PFAM: protein of unknown function DUF126; KEGG: mba:Mbar_A0718 hypothetical protein; hypothetical protein complement(1018827..1019291) Burkholderia cenocepacia AU 1054 4096477 YP_626228.1 CDS Bcen_6393 NC_008062.1 1019288 1020574 R PFAM: protein of unknown function DUF521; KEGG: bpe:BP2824 hypothetical protein; hypothetical protein complement(1019288..1020574) Burkholderia cenocepacia AU 1054 4096478 YP_626229.1 CDS Bcen_6394 NC_008062.1 1020575 1021492 R PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reu:Reut_D6479 taurine catabolism dioxygenase TauD/TfdA; taurine catabolism dioxygenase TauD/TfdA complement(1020575..1021492) Burkholderia cenocepacia AU 1054 4096479 YP_626230.1 CDS Bcen_6395 NC_008062.1 1021482 1022864 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reu:Reut_D6469 benzoate transport; major facilitator transporter complement(1021482..1022864) Burkholderia cenocepacia AU 1054 4096480 YP_626231.1 CDS Bcen_6396 NC_008062.1 1022866 1024581 R PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: reu:Reut_C5894 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase complement(1022866..1024581) Burkholderia cenocepacia AU 1054 4096481 YP_626232.1 CDS Bcen_6397 NC_008062.1 1024670 1025632 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppu:PP1942 transcriptional regulator, LysR family; LysR family transcriptional regulator 1024670..1025632 Burkholderia cenocepacia AU 1054 4096482 YP_626233.1 CDS Bcen_6398 NC_008062.1 1025652 1025999 R PFAM: helix-turn-helix, HxlR type; KEGG: sil:SPO1190 transcriptional regulator family protein; HxlR family transcriptional regulator complement(1025652..1025999) Burkholderia cenocepacia AU 1054 4096483 YP_626234.1 CDS Bcen_6399 NC_008062.1 1026127 1026981 D PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA-like; KEGG: yps:YPTB2423 hypothetical protein; NmrA-like 1026127..1026981 Burkholderia cenocepacia AU 1054 4096484 YP_626235.1 CDS Bcen_6400 NC_008062.1 1027174 1028070 R PFAM: amidohydrolase 2; KEGG: sil:SPO2544 amidohydrolase family protein; amidohydrolase 2 complement(1027174..1028070) Burkholderia cenocepacia AU 1054 4096485 YP_626236.1 CDS Bcen_6401 NC_008062.1 1028157 1028471 R TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: sme:SMc03002 conserved hypothetical protein; L-rhamnose 1-epimerase complement(1028157..1028471) Burkholderia cenocepacia AU 1054 4096349 YP_626237.1 CDS Bcen_6402 NC_008062.1 1028489 1029277 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cne:CNB05760 glucose 1-dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1028489..1029277) Burkholderia cenocepacia AU 1054 4096350 YP_626238.1 CDS Bcen_6403 NC_008062.1 1029374 1030552 R PFAM: Mandelate racemase/muconate lactonizing enzyme-like; KEGG: sec:SC2294 paral galactonate dehydratase; mandelate racemase/muconate lactonizing-like protein complement(1029374..1030552) Burkholderia cenocepacia AU 1054 4096351 YP_626239.1 CDS Bcen_6404 NC_008062.1 1030657 1031592 R PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll7953 hypothetical protein; dihydrodipicolinate synthetase complement(1030657..1031592) Burkholderia cenocepacia AU 1054 4096352 YP_626240.1 CDS Bcen_6405 NC_008062.1 1031671 1032555 R KEGG: bur:Bcep18194_B0560 rhamnosyltransferase; rhamnosyltransferase complement(1031671..1032555) Burkholderia cenocepacia AU 1054 4096353 YP_626241.1 CDS Bcen_6406 NC_008062.1 1032710 1033411 R PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: bja:bll6810 transcriptional regulatory protein; GntR family transcriptional regulator complement(1032710..1033411) Burkholderia cenocepacia AU 1054 4096354 YP_626242.1 CDS Bcen_6407 NC_008062.1 1033502 1034185 R PFAM: Asp/Glu racemase; KEGG: sil:SPO2437 Asp/Glu/Hydantoin racemase family protein; Asp/Glu racemase complement(1033502..1034185) Burkholderia cenocepacia AU 1054 4096355 YP_626243.1 CDS Bcen_6408 NC_008062.1 1034315 1035559 R PFAM: FAD dependent oxidoreductase; KEGG: mlo:mlr5698 D-amino acid dehydrogenase, small subunit; FAD dependent oxidoreductase complement(1034315..1035559) Burkholderia cenocepacia AU 1054 4096356 YP_626244.1 CDS Bcen_6409 NC_008062.1 1035577 1035972 R PFAM: Endoribonuclease L-PSP; KEGG: sme:SMc00791 hypothetical protein; endoribonuclease L-PSP complement(1035577..1035972) Burkholderia cenocepacia AU 1054 4096357 YP_626245.1 CDS Bcen_6410 NC_008062.1 1036246 1037346 D PFAM: Extracellular ligand-binding receptor; KEGG: dvu:DVU0712 amino acid ABC transporter, periplasmic-binding protein; extracellular ligand-binding receptor 1036246..1037346 Burkholderia cenocepacia AU 1054 4096358 YP_626246.1 CDS Bcen_6411 NC_008062.1 1037383 1038276 D PFAM: inner-membrane translocator; KEGG: mlo:mll7173 ABC transporter, permease protein; inner-membrane translocator 1037383..1038276 Burkholderia cenocepacia AU 1054 4096359 YP_626247.1 CDS Bcen_6412 NC_008062.1 1038269 1039156 D PFAM: inner-membrane translocator; KEGG: rru:Rru_A3415 inner-membrane translocator; inner-membrane translocator 1038269..1039156 Burkholderia cenocepacia AU 1054 4096360 YP_626248.1 CDS Bcen_6413 NC_008062.1 1039153 1039938 D PFAM: ABC transporter related; SMART: ATPase; KEGG: hma:rrnAC0827 branched-chain amino acid ABC transporter ATP-binding protein; ABC transporter related 1039153..1039938 Burkholderia cenocepacia AU 1054 4096361 YP_626249.1 CDS Bcen_6414 NC_008062.1 1039935 1040654 D PFAM: ABC transporter related; SMART: ATPase; KEGG: tfu:Tfu_1185 ABC-type branched-chain amino acid transport systems ATPase component; ABC transporter related 1039935..1040654 Burkholderia cenocepacia AU 1054 4096362 YP_626250.1 CDS Bcen_6416 NC_008062.1 1042080 1042964 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: xac:XAC3582 dTDP-4-keto-L-rhamnose reductase; dTDP-4-dehydrorhamnose reductase 1042080..1042964 Burkholderia cenocepacia AU 1054 4096364 YP_626251.1 CDS Bcen_6417 NC_008062.1 1042961 1043977 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: gvi:glr3235 dTDP-glucose 4-6-dehydratase; dTDP-glucose 4,6-dehydratase 1042961..1043977 Burkholderia cenocepacia AU 1054 4096365 YP_626252.1 CDS Bcen_6418 NC_008062.1 1044102 1044404 R hypothetical protein complement(1044102..1044404) Burkholderia cenocepacia AU 1054 4096366 YP_626253.1 CDS Bcen_6419 NC_008062.1 1044711 1045154 D PFAM: heat shock protein Hsp20; KEGG: bpm:BURPS1710b_3428 heat shock protein, HSP20 family; heat shock protein Hsp20 1044711..1045154 Burkholderia cenocepacia AU 1054 4096367 YP_626254.1 CDS Bcen_6420 NC_008062.1 1045176 1045616 D PFAM: heat shock protein Hsp20; KEGG: bpm:BURPS1710b_3427 heat shock protein, HSP20 family; heat shock protein Hsp20 1045176..1045616 Burkholderia cenocepacia AU 1054 4096388 YP_626255.1 CDS Bcen_6421 NC_008062.1 1045785 1046081 D hypothetical protein 1045785..1046081 Burkholderia cenocepacia AU 1054 4096389 YP_626256.1 CDS Bcen_6422 NC_008062.1 1046213 1047211 R PFAM: Transketolase, central region; Transketolase-like; KEGG: reu:Reut_B4778 transketolase, central region:transketolase, C-terminal; transketolase, central region complement(1046213..1047211) Burkholderia cenocepacia AU 1054 4096390 YP_626257.1 CDS Bcen_6423 NC_008062.1 1047208 1048053 R PFAM: Transketolase-like; KEGG: reu:Reut_B4777 transketolase, N-terminal; transketolase-like complement(1047208..1048053) Burkholderia cenocepacia AU 1054 4096391 YP_626258.1 CDS Bcen_6424 NC_008062.1 1048103 1049428 R PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4776 general substrate transporter:major facilitator superfamily MFS_1; major facilitator transporter complement(1048103..1049428) Burkholderia cenocepacia AU 1054 4096392 YP_626259.1 CDS Bcen_6425 NC_008062.1 1049503 1050252 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_B4775 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1049503..1050252) Burkholderia cenocepacia AU 1054 4096393 YP_626260.1 CDS Bcen_6426 NC_008062.1 1050410 1051309 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: reu:Reut_B4774 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator complement(1050410..1051309) Burkholderia cenocepacia AU 1054 4096394 YP_626261.1 CDS Bcen_6427 NC_008062.1 1051574 1052497 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pfo:Pfl_3512 transcriptional regulator, LysR family; LysR family transcriptional regulator 1051574..1052497 Burkholderia cenocepacia AU 1054 4096395 YP_626262.1 CDS Bcen_6428 NC_008062.1 1052532 1053866 D PFAM: sodium:dicarboxylate symporter; KEGG: ppu:PP2056 C4-dicarboxylate transport protein; sodium:dicarboxylate symporter 1052532..1053866 Burkholderia cenocepacia AU 1054 4096396 YP_626263.1 CDS Bcen_6429 NC_008062.1 1053891 1054673 R PFAM: extracellular solute-binding protein, family 1; KEGG: pfo:Pfl_3511 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(1053891..1054673) Burkholderia cenocepacia AU 1054 4096397 YP_626264.1 CDS Bcen_6430 NC_008062.1 1054729 1056024 R TIGRFAM: metabolite; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: psb:Psyr_3167 citrate-proton symport; metabolite complement(1054729..1056024) Burkholderia cenocepacia AU 1054 4096398 YP_626265.1 CDS Bcen_6431 NC_008062.1 1056362 1057870 D TIGRFAM: GGDEF domain; PFAM: GGDEF; KEGG: bte:BTH_II1127 GGDEF domain protein; diguanylate cyclase 1056362..1057870 Burkholderia cenocepacia AU 1054 4096399 YP_626266.1 CDS Bcen_6432 NC_008062.1 1057970 1058875 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mlo:mll0238 probable transcriptional regulator; LysR family transcriptional regulator complement(1057970..1058875) Burkholderia cenocepacia AU 1054 4096400 YP_626267.1 CDS Bcen_6433 NC_008062.1 1058986 1059849 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; TrkA-N; NmrA-like; KEGG: pst:PSPTO3020 hypothetical protein; NmrA-like 1058986..1059849 Burkholderia cenocepacia AU 1054 4096401 YP_626268.1 CDS Bcen_6434 NC_008062.1 1060026 1060928 R PFAM: GCN5-related N-acetyltransferase; KEGG: psp:PSPPH_3323 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase complement(1060026..1060928) Burkholderia cenocepacia AU 1054 4096402 YP_626269.1 CDS Bcen_6435 NC_008062.1 1061127 1062314 R KEGG: eba:ebA5427 hydrolase/peptidase TIGRFAM: Peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation; peptidase M20D, amidohydrolase complement(1061127..1062314) Burkholderia cenocepacia AU 1054 4096403 YP_626270.1 CDS Bcen_6436 NC_008062.1 1062380 1063837 R PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_1806 aldehyde dehydrogenase; aldehyde dehydrogenase complement(1062380..1063837) Burkholderia cenocepacia AU 1054 4096404 YP_626271.1 CDS Bcen_6437 NC_008062.1 1063931 1065256 R PFAM: FAD dependent oxidoreductase; KEGG: sme:SMa1869 deaminase; FAD dependent oxidoreductase complement(1063931..1065256) Burkholderia cenocepacia AU 1054 4096405 YP_626272.1 CDS Bcen_6438 NC_008062.1 1065259 1066041 R PFAM: protein of unknown function DUF861, cupin_3; KEGG: pst:PSPTO0244 hypothetical protein; hypothetical protein complement(1065259..1066041) Burkholderia cenocepacia AU 1054 4096406 YP_626273.1 CDS Bcen_6439 NC_008062.1 1066117 1066548 R PFAM: helix-turn-helix, AraC type; KEGG: mlo:mlr6129 transcriptional regulator; AraC family transcriptional regulator complement(1066117..1066548) Burkholderia cenocepacia AU 1054 4096407 YP_626274.1 CDS Bcen_6440 NC_008062.1 1066572 1067906 R PFAM: FAD dependent oxidoreductase; KEGG: pst:PSPTO0248 oxidoreductase, FAD-binding; FAD dependent oxidoreductase complement(1066572..1067906) Burkholderia cenocepacia AU 1054 4096427 YP_626275.1 CDS Bcen_6441 NC_008062.1 1068046 1069920 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter-like; SMART: ATPase; KEGG: pst:PSPTO0252 peptide ABC transporter, ATP-binding protein; ABC transporter related complement(1068046..1069920) Burkholderia cenocepacia AU 1054 4096428 YP_626276.1 CDS Bcen_6442 NC_008062.1 1069920 1070801 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psb:Psyr_0155 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(1069920..1070801) Burkholderia cenocepacia AU 1054 4096429 YP_626277.1 CDS Bcen_6443 NC_008062.1 1070907 1071860 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psp:PSPPH_5031 peptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component complement(1070907..1071860) Burkholderia cenocepacia AU 1054 4096430 YP_626278.1 CDS Bcen_6444 NC_008062.1 1071940 1073523 R TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: psp:PSPPH_5030 peptide ABC transporter, periplasmic peptide-binding protein; twin-arginine translocation pathway signal complement(1071940..1073523) Burkholderia cenocepacia AU 1054 4096431 YP_626279.1 CDS Bcen_6445 NC_008062.1 1073575 1073976 R hypothetical protein complement(1073575..1073976) Burkholderia cenocepacia AU 1054 4096432 YP_626280.1 CDS Bcen_6446 NC_008062.1 1074217 1075755 R PFAM: chemotaxis sensory transducer; Cache, type 2; KEGG: bps:BPSL0465 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(1074217..1075755) Burkholderia cenocepacia AU 1054 4096433 YP_626281.1 CDS Bcen_6447 NC_008062.1 1075942 1076610 R TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; KEGG: mlo:mlr7041 similar to haloalkanoic acid dehalogenase; haloacid dehalogenase, type II complement(1075942..1076610) Burkholderia cenocepacia AU 1054 4096434 YP_626282.1 CDS Bcen_6448 NC_008062.1 1077078 1077938 D PFAM: GCN5-related N-acetyltransferase; KEGG: psp:PSPPH_3323 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase 1077078..1077938 Burkholderia cenocepacia AU 1054 4096435 YP_626283.1 CDS Bcen_6449 NC_008062.1 1077952 1078878 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bja:bll6710 probable dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1077952..1078878 Burkholderia cenocepacia AU 1054 4096436 YP_626284.1 CDS Bcen_6450 NC_008062.1 1079043 1080443 D PFAM: aminotransferase class-III; KEGG: mlo:mll7037 hypothetical protein; hypothetical protein 1079043..1080443 Burkholderia cenocepacia AU 1054 4096437 YP_626285.1 CDS Bcen_6451 NC_008062.1 1080529 1081020 D PFAM: regulatory proteins, AsnC/Lrp; KEGG: psp:PSPPH_5042 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1080529..1081020 Burkholderia cenocepacia AU 1054 4096438 YP_626286.1 CDS Bcen_6452 NC_008062.1 1081125 1082597 D PFAM: aldehyde dehydrogenase; KEGG: rso:RSp1611 probable succinate-semialdehyde dehydrogenase oxidoreductase protein; succinate-semialdehyde dehydrogenase (NAD(P)+) 1081125..1082597 Burkholderia cenocepacia AU 1054 4096439 YP_626287.1 CDS Bcen_6453 NC_008062.1 1082730 1083326 D PFAM: regulatory protein, TetR; KEGG: bja:blr8185 transcriptional regulatory protein; TetR family transcriptional regulator 1082730..1083326 Burkholderia cenocepacia AU 1054 4096440 YP_626288.1 CDS Bcen_6454 NC_008062.1 1083376 1084857 D PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_2726 major facilitator superfamily MFS_1; major facilitator transporter 1083376..1084857 Burkholderia cenocepacia AU 1054 4096441 YP_626289.1 CDS Bcen_6455 NC_008062.1 1084928 1085236 D PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bja:blr8190 hypothetical protein; ethyl tert-butyl ether degradation EthD 1084928..1085236 Burkholderia cenocepacia AU 1054 4096442 YP_626290.1 CDS Bcen_6456 NC_008062.1 1085311 1085682 D hypothetical protein 1085311..1085682 Burkholderia cenocepacia AU 1054 4096443 YP_626291.1 CDS Bcen_6457 NC_008062.1 1085801 1087513 R PFAM: regulatory protein, LuxR; Bacterio-opsin activator, HTH; KEGG: mpa:MAP3352c hypothetical protein; LuxR family transcriptional regulator complement(1085801..1087513) Burkholderia cenocepacia AU 1054 4096444 YP_626292.1 CDS Bcen_6458 NC_008062.1 1087569 1088144 D KEGG: bja:blr4007 hypothetical protein; hypothetical protein 1087569..1088144 Burkholderia cenocepacia AU 1054 4096445 YP_626293.1 CDS Bcen_6459 NC_008062.1 1088250 1089596 R PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_A2617 general substrate transporter:major facilitator superfamily MFS_1; major facilitator transporter complement(1088250..1089596) Burkholderia cenocepacia AU 1054 4097129 YP_626294.1 CDS Bcen_6460 NC_008062.1 1089895 1090932 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: atu:Atu4685 transcriptional regulator, LacI family; LacI family transcription regulator 1089895..1090932 Burkholderia cenocepacia AU 1054 4097130 YP_626295.1 CDS Bcen_6461 NC_008062.1 1091121 1092902 D catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 1091121..1092902 Burkholderia cenocepacia AU 1054 4097131 YP_626296.1 CDS Bcen_6462 NC_008062.1 1092935 1094113 D KEGG: bps:BPSS2066 hypothetical protein; hypothetical protein 1092935..1094113 Burkholderia cenocepacia AU 1054 4097132 YP_626297.1 CDS Bcen_6463 NC_008062.1 1094319 1096283 R PFAM: histidine kinase, HAMP region; Cache; chemotaxis sensory transducer; KEGG: bur:Bcep18194_C6641 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1094319..1096283) Burkholderia cenocepacia AU 1054 4097133 YP_626298.1 CDS Bcen_6464 NC_008062.1 1096489 1098075 D PFAM: chemotaxis sensory transducer; KEGG: bte:BTH_I2374 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1096489..1098075 Burkholderia cenocepacia AU 1054 4097134 YP_626299.1 CDS Bcen_6465 NC_008062.1 1098265 1100226 D TIGRFAM: Autotransporter-associated beta strand repeat; PFAM: phosphoesterase, PA-phosphatase related; KEGG: rso:RSc0131 probable lipoprotein; beta strand repeat-containing protein 1098265..1100226 Burkholderia cenocepacia AU 1054 4097135 YP_626300.1 CDS Bcen_6466 NC_008062.1 1100283 1100561 R hypothetical protein complement(1100283..1100561) Burkholderia cenocepacia AU 1054 4097136 YP_626301.1 CDS Bcen_6467 NC_008062.1 1100617 1102140 R PFAM: D-galactarate dehydratase/Altronate hydrolase-like; KEGG: ppu:PP2834 hydrolase, UxaA family; Altronate dehydratase complement(1100617..1102140) Burkholderia cenocepacia AU 1054 4097137 YP_626302.1 CDS Bcen_6468 NC_008062.1 1102137 1103300 R PFAM: Mannitol dehydrogenase-like; KEGG: atc:AGR_C_5101 altronate oxidoreductase; mannitol dehydrogenase-like complement(1102137..1103300) Burkholderia cenocepacia AU 1054 4097138 YP_626303.1 CDS Bcen_6469 NC_008062.1 1103332 1104369 R PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: atc:AGR_C_5103 hypothetical zinc-type alcohol dehydrogenase-like protein in TSR-MDOB intergenic region; alcohol dehydrogenase GroES-like protein complement(1103332..1104369) Burkholderia cenocepacia AU 1054 4097139 YP_626304.1 CDS Bcen_6470 NC_008062.1 1104366 1105241 R PFAM: amidohydrolase 2; KEGG: atc:AGR_C_5105 conserved hypothetical protein; amidohydrolase 2 complement(1104366..1105241) Burkholderia cenocepacia AU 1054 4097140 YP_626305.1 CDS Bcen_6471 NC_008062.1 1105238 1106254 R PFAM: aldo/keto reductase; KEGG: atc:AGR_C_5108 possible oxidoreductase; aldo/keto reductase complement(1105238..1106254) Burkholderia cenocepacia AU 1054 4097141 YP_626306.1 CDS Bcen_6472 NC_008062.1 1106290 1107237 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_C_5109 ribose ABC transporter, periplasmic D-ribose-binding protein VCA0130; periplasmic binding protein/LacI transcriptional regulator complement(1106290..1107237) Burkholderia cenocepacia AU 1054 4097142 YP_626307.1 CDS Bcen_6473 NC_008062.1 1107280 1108311 R PFAM: inner-membrane translocator; KEGG: atc:AGR_C_5111 sugar ABC transporter (permease); inner-membrane translocator complement(1107280..1108311) Burkholderia cenocepacia AU 1054 4097143 YP_626308.1 CDS Bcen_6474 NC_008062.1 1108304 1109848 R PFAM: ABC transporter related; SMART: ATPase; KEGG: atc:AGR_C_5112 ABC transporter protein, ATP binding component; ABC transporter related complement(1108304..1109848) Burkholderia cenocepacia AU 1054 4097144 YP_626309.1 CDS Bcen_6475 NC_008062.1 1110082 1110783 D PFAM: regulatory protein GntR, HTH; GntR-like; KEGG: atc:AGR_C_5113 exu regulon regulator; GntR-like 1110082..1110783 Burkholderia cenocepacia AU 1054 4097145 YP_626310.1 CDS Bcen_6476 NC_008062.1 1110834 1112162 R PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4121 general substrate transporter:major facilitator superfamily MFS_1; major facilitator transporter complement(1110834..1112162) Burkholderia cenocepacia AU 1054 4097146 YP_626311.1 CDS Bcen_6477 NC_008062.1 1112691 1113635 D PFAM: helix-turn-helix, AraC type; KEGG: bur:Bcep18194_B0600 transcriptional regulator, AraC family; AraC family transcriptional regulator 1112691..1113635 Burkholderia cenocepacia AU 1054 4097147 YP_626312.1 CDS Bcen_6478 NC_008062.1 1113924 1115363 D PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B0955 amino acid transporter; amino acid permease-associated region 1113924..1115363 Burkholderia cenocepacia AU 1054 4097148 YP_626313.1 CDS Bcen_6479 NC_008062.1 1115535 1117070 D PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B3159 betaine-aldehyde dehydrogenase; aldehyde dehydrogenase 1115535..1117070 Burkholderia cenocepacia AU 1054 4097311 YP_626314.1 CDS Bcen_6480 NC_008062.1 1117133 1118497 D PFAM: aminotransferase class-III; KEGG: pfl:PFL_3219 hypothetical protein; hypothetical protein 1117133..1118497 Burkholderia cenocepacia AU 1054 4097312 YP_626315.1 CDS Bcen_6481 NC_008062.1 1118649 1119212 D PFAM: cytochrome B561; KEGG: bja:bll3557 cytochrome b561; cytochrome B561 1118649..1119212 Burkholderia cenocepacia AU 1054 4097313 YP_626316.1 CDS Bcen_6482 NC_008062.1 1119404 1120552 D PFAM: porin, Gram-negative type; KEGG: bte:BTH_II0215 outer membrane porin OpcP; porin 1119404..1120552 Burkholderia cenocepacia AU 1054 4097314 YP_626317.1 CDS Bcen_6483 NC_008062.1 1120615 1121670 R PFAM: porin, Gram-negative type; KEGG: bur:Bcep18194_B2385 outer membrane protein (porin); porin complement(1120615..1121670) Burkholderia cenocepacia AU 1054 4097315 YP_626318.1 CDS Bcen_6484 NC_008062.1 1121982 1122710 D PFAM: regulatory proteins, IclR; Helix-turn-helix, type 11; KEGG: bja:bll6383 transcriptional regulatory protein; IclR family transcriptional regulator 1121982..1122710 Burkholderia cenocepacia AU 1054 4097316 YP_626319.1 CDS Bcen_6485 NC_008062.1 1122765 1124222 R PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_B3638 aldehyde dehydrogenase; aldehyde dehydrogenase complement(1122765..1124222) Burkholderia cenocepacia AU 1054 4097317 YP_626320.1 CDS Bcen_6486 NC_008062.1 1124308 1124640 R PFAM: NIPSNAP; KEGG: rsp:RSP_3143 hypothetical protein; hypothetical protein complement(1124308..1124640) Burkholderia cenocepacia AU 1054 4097318 YP_626321.1 CDS mhpA NC_008062.1 1124630 1126258 R catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; 3-(3-hydroxyphenyl)propionate hydroxylase complement(1124630..1126258) Burkholderia cenocepacia AU 1054 4097319 YP_626322.1 CDS Bcen_6488 NC_008062.1 1126255 1127154 R PFAM: alpha/beta hydrolase fold; KEGG: bbr:BB0670 hydrolase; alpha/beta hydrolase fold complement(1126255..1127154) Burkholderia cenocepacia AU 1054 4097320 YP_626323.1 CDS Bcen_6489 NC_008062.1 1127182 1127787 R PFAM: protein of unknown function DUF1185; KEGG: bbr:BB0671 hypothetical protein; hypothetical protein complement(1127182..1127787) Burkholderia cenocepacia AU 1054 4097321 YP_626324.1 CDS Bcen_6490 NC_008062.1 1127836 1128351 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bme:BMEI1118 biphenyl-2,3-diol 1,2-dioxygenase III; glyoxalase/bleomycin resistance protein/dioxygenase complement(1127836..1128351) Burkholderia cenocepacia AU 1054 4097322 YP_626325.1 CDS Bcen_6491 NC_008062.1 1128364 1129401 R PFAM: glycosyl hydrolase, BNR repeat; KEGG: bpa:BPP0665 hypothetical protein; BNR repeat-containing glycosyl hydrolase complement(1128364..1129401) Burkholderia cenocepacia AU 1054 4097323 YP_626326.1 CDS Bcen_6492 NC_008062.1 1129417 1130229 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_B3839 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1129417..1130229) Burkholderia cenocepacia AU 1054 4097324 YP_626327.1 CDS Bcen_6494 NC_008062.1 1132248 1134353 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rso:RS03023 ferrisiderophore receptor protein; TonB-dependent siderophore receptor 1132248..1134353 Burkholderia cenocepacia AU 1054 4097326 YP_626328.1 CDS Bcen_6495 NC_008062.1 1134389 1135642 R PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: atc:AGR_L_2577 probable arsenical pump membrane protein; arsenical pump membrane protein complement(1134389..1135642) Burkholderia cenocepacia AU 1054 4097327 YP_626329.1 CDS Bcen_6496 NC_008062.1 1135680 1136945 R PFAM: major facilitator superfamily MFS_1; KEGG: xcv:XCV0235 major facilitator superfamily protein; major facilitator transporter complement(1135680..1136945) Burkholderia cenocepacia AU 1054 4097328 YP_626330.1 CDS Bcen_6497 NC_008062.1 1136967 1137515 R KEGG: xoo:XOO4204 hypothetical protein; hypothetical protein complement(1136967..1137515) Burkholderia cenocepacia AU 1054 4097329 YP_626331.1 CDS Bcen_6498 NC_008062.1 1137558 1138337 R KEGG: xcv:XCV0233 secreted protein; secreted protein complement(1137558..1138337) Burkholderia cenocepacia AU 1054 4096503 YP_626332.1 CDS Bcen_6499 NC_008062.1 1138546 1139922 R PFAM: response regulator receiver; sigma-54 factor, interaction region; helix-turn-helix, Fis-type; SMART: ATPase; KEGG: xac:XAC0226 two-component system regulatory protein; two component, sigma54 specific, Fis family transcriptional regulator complement(1138546..1139922) Burkholderia cenocepacia AU 1054 4096504 YP_626333.1 CDS Bcen_6500 NC_008062.1 1139904 1141175 R PFAM: ATP-binding region, ATPase-like; histidine kinase A-like; KEGG: xcv:XCV0231 two-component system sensor histidine kinase; histidine kinase complement(1139904..1141175) Burkholderia cenocepacia AU 1054 4096505 YP_626334.1 CDS Bcen_6502 NC_008062.1 1141934 1143133 R PFAM: inner-membrane translocator; KEGG: bte:BTH_I2341 sugar ABC transporter, permease protein; inner-membrane translocator complement(1141934..1143133) Burkholderia cenocepacia AU 1054 4096507 YP_626335.1 CDS Bcen_6503 NC_008062.1 1143130 1144689 R with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit complement(1143130..1144689) Burkholderia cenocepacia AU 1054 4096508 YP_626336.1 CDS Bcen_6504 NC_008062.1 1144749 1145846 R TIGRFAM: Twin-arginine translocation pathway signal; D-xylose ABC transporter, substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_I2339 D-xylose ABC transporter, periplasmic-D xylose binding protein; D-xylose ABC transporter, substrate-binding protein complement(1144749..1145846) Burkholderia cenocepacia AU 1054 4096509 YP_626337.1 CDS Bcen_6505 NC_008062.1 1145866 1147344 R TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: eca:ECA0096 xylulose kinase; xylulokinase complement(1145866..1147344) Burkholderia cenocepacia AU 1054 4096510 YP_626338.1 CDS Bcen_6506 NC_008062.1 1147349 1148671 R catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase complement(1147349..1148671) Burkholderia cenocepacia AU 1054 4096511 YP_626339.1 CDS Bcen_6507 NC_008062.1 1148945 1150138 D PFAM: helix-turn-helix, AraC type; KEGG: bte:BTH_I2337 xylose operon regluatory protein; AraC family transcriptional regulator 1148945..1150138 Burkholderia cenocepacia AU 1054 4096512 YP_626340.1 CDS Bcen_6508 NC_008062.1 1150166 1151254 D PFAM: Aldose 1-epimerase; KEGG: bte:BTH_I2336 aldose 1-epimerase; aldose 1-epimerase 1150166..1151254 Burkholderia cenocepacia AU 1054 4096513 YP_626341.1 CDS Bcen_6509 NC_008062.1 1151430 1152389 D PFAM: helix-turn-helix, AraC type; KEGG: pfl:PFL_3186 transcriptional regulator, AraC family; AraC family transcriptional regulator 1151430..1152389 Burkholderia cenocepacia AU 1054 4096514 YP_626342.1 CDS Bcen_6510 NC_008062.1 1152512 1153078 D TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase; KEGG: nwi:Nwi_0460 carboxymuconolactone decarboxylase; alkylhydroperoxidase AhpD core 1152512..1153078 Burkholderia cenocepacia AU 1054 4096515 YP_626343.1 CDS Bcen_6511 NC_008062.1 1153051 1154166 D KEGG: pae:PA2330 hypothetical protein; hypothetical protein 1153051..1154166 Burkholderia cenocepacia AU 1054 4096516 YP_626344.1 CDS Bcen_6512 NC_008062.1 1154163 1154957 D PFAM: ABC transporter related; SMART: ATPase; KEGG: pfl:PFL_3183 ABC transporter, ATP-binding protein; ABC transporter related 1154163..1154957 Burkholderia cenocepacia AU 1054 4096517 YP_626345.1 CDS Bcen_6513 NC_008062.1 1154969 1156159 D TIGRFAM: Twin-arginine translocation pathway signal; KEGG: ppu:PP3636 sulfonate ABC transporter, periplasmic sulfonate-binding protein; twin-arginine translocation pathway signal 1154969..1156159 Burkholderia cenocepacia AU 1054 4096518 YP_626346.1 CDS Bcen_6514 NC_008062.1 1156152 1156979 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_3181 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 1156152..1156979 Burkholderia cenocepacia AU 1054 4096519 YP_626347.1 CDS Bcen_6515 NC_008062.1 1157031 1158269 R PFAM: acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_C7499 acyl-CoA dehydrogenase; Acyl-CoA dehydrogenase, type 2-like complement(1157031..1158269) Burkholderia cenocepacia AU 1054 4096520 YP_626348.1 CDS Bcen_6516 NC_008062.1 1158577 1159848 D PFAM: Acyl-CoA dehydrogenase, type 2-like; KEGG: bur:Bcep18194_C7500 acyl-CoA dehydrogenase-like; Acyl-CoA dehydrogenase, type 2-like 1158577..1159848 Burkholderia cenocepacia AU 1054 4096521 YP_626349.1 CDS Bcen_6517 NC_008062.1 1159845 1161245 D KEGG: bur:Bcep18194_C7501 flavin-dependent oxidoreductase-like; flavin-dependent oxidoreductase-like 1159845..1161245 Burkholderia cenocepacia AU 1054 4096522 YP_626350.1 CDS Bcen_6518 NC_008062.1 1161373 1162800 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_C7502 major facilitator superfamily (MFS_1) transporter; major facilitator transporter complement(1161373..1162800) Burkholderia cenocepacia AU 1054 4096486 YP_626351.1 CDS Bcen_6519 NC_008062.1 1163135 1164127 D TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_C7503 ABC transporter, periplasmic ligand binding protein, aliphatic sulphonates; ABC transporter, substrate-binding protein, aliphatic sulphonates 1163135..1164127 Burkholderia cenocepacia AU 1054 4096487 YP_626352.1 CDS Bcen_6520 NC_008062.1 1164145 1165002 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_C7504 ABC transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 1164145..1165002 Burkholderia cenocepacia AU 1054 4096488 YP_626353.1 CDS Bcen_6521 NC_008062.1 1164999 1165811 D PFAM: ABC transporter related; SMART: ATPase; KEGG: bur:Bcep18194_C7505 ABC transporter, ATPase subunit; ABC transporter related 1164999..1165811 Burkholderia cenocepacia AU 1054 4096489 YP_626354.1 CDS Bcen_6522 NC_008062.1 1165822 1166730 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6615 alpha/beta hydrolase; alpha/beta hydrolase fold complement(1165822..1166730) Burkholderia cenocepacia AU 1054 4096490 YP_626355.1 CDS Bcen_6523 NC_008062.1 1166819 1167205 D PFAM: regulatory protein, MerR; KEGG: bur:Bcep18194_C6614 transcriptional regulator, MerR family; MerR family transcriptional regulator 1166819..1167205 Burkholderia cenocepacia AU 1054 4096491 YP_626356.1 CDS Bcen_6524 NC_008062.1 1167229 1167834 D KEGG: bur:Bcep18194_C7166 adenylate kinase and related kinases; adenylate kinase and related kinases 1167229..1167834 Burkholderia cenocepacia AU 1054 4096492 YP_626357.1 CDS Bcen_6525 NC_008062.1 1167862 1168584 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bur:Bcep18194_C7168 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1167862..1168584) Burkholderia cenocepacia AU 1054 4096493 YP_626358.1 CDS Bcen_6526 NC_008062.1 1168630 1172223 R PFAM: YadA-like-like; Haemagluttinin motif; Hep_Hag; KEGG: bur:Bcep18194_C7171 haemagluttinin/autotransporter adhesin; YadA-like complement(1168630..1172223) Burkholderia cenocepacia AU 1054 4096494 YP_626359.1 CDS Bcen_6527 NC_008062.1 1172949 1173281 R hypothetical protein complement(1172949..1173281) Burkholderia cenocepacia AU 1054 4096495 YP_626360.1 CDS Bcen_6528 NC_008062.1 1173364 1174179 D PFAM: helix-turn-helix, AraC type; response regulator receiver; KEGG: bur:Bcep18194_C7173 two component transcriptional regulator, AraC family; two component AraC family transcriptional regulator 1173364..1174179 Burkholderia cenocepacia AU 1054 4096496 YP_626361.1 CDS Bcen_6529 NC_008062.1 1174201 1176378 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bur:Bcep18194_C7174 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(1174201..1176378) Burkholderia cenocepacia AU 1054 4096497 YP_626362.1 CDS Bcen_6530 NC_008062.1 1176658 1177569 D PFAM: protein of unknown function DUF72; KEGG: reu:Reut_A0606 protein of unknown function DUF72; hypothetical protein 1176658..1177569 Burkholderia cenocepacia AU 1054 4096498 YP_626363.1 CDS Bcen_6531 NC_008062.1 1177689 1177910 D KEGG: reu:Reut_B4574 hypothetical protein; hypothetical protein 1177689..1177910 Burkholderia cenocepacia AU 1054 4096499 YP_626364.1 CDS Bcen_6532 NC_008062.1 1178185 1182492 R KEGG: mbo:Mb3541 PE-PGRS family protein; PE-PGRS family protein complement(1178185..1182492) Burkholderia cenocepacia AU 1054 4096500 YP_626365.1 CDS Bcen_6533 NC_008062.1 1182787 1194255 R TIGRFAM: Outer membrane autotransporter barrel; Autotransporter-associated beta strand repeat; PFAM: transferase hexapeptide repeat; Autotransporter beta-domain; KEGG: bur:Bcep18194_B0758 outer membrane autotransporter barrel; Outer membrane autotransporter barrel complement(1182787..1194255) Burkholderia cenocepacia AU 1054 4096501 YP_626366.1 CDS Bcen_6534 NC_008062.1 1194258 1195505 R KEGG: bur:Bcep18194_B0758 outer membrane autotransporter barrel; outer membrane autotransporter barrel complement(1194258..1195505) Burkholderia cenocepacia AU 1054 4096502 Bcen_R0001 tRNA Bcen_R0001 NC_008060.1 51091 51167 R tRNA-Val complement(51091..51167) Burkholderia cenocepacia AU 1054 4091923 Bcen_R0005 tRNA Bcen_R0005 NC_008060.1 103223 103299 R tRNA-Pro complement(103223..103299) Burkholderia cenocepacia AU 1054 4091859 Bcen_R0007 tRNA Bcen_R0007 NC_008060.1 352508 352584 R tRNA-Lys complement(352508..352584) Burkholderia cenocepacia AU 1054 4092340 Bcen_R0008 tRNA Bcen_R0008 NC_008060.1 482680 482754 R tRNA-Gly complement(482680..482754) Burkholderia cenocepacia AU 1054 4090932 Bcen_R0009 tRNA Bcen_R0009 NC_008060.1 545108 545198 D tRNA-Ser 545108..545198 Burkholderia cenocepacia AU 1054 4092277 Bcen_R0010 tRNA Bcen_R0010 NC_008060.1 557255 557342 R tRNA-Ser complement(557255..557342) Burkholderia cenocepacia AU 1054 4093550 Bcen_R0011 tRNA Bcen_R0011 NC_008060.1 564666 564742 R tRNA-Arg complement(564666..564742) Burkholderia cenocepacia AU 1054 4093558 Bcen_R0012 tRNA Bcen_R0012 NC_008060.1 564804 564880 R tRNA-Arg complement(564804..564880) Burkholderia cenocepacia AU 1054 4093559 Bcen_R0013 tRNA Bcen_R0013 NC_008060.1 564947 565023 R tRNA-Arg complement(564947..565023) Burkholderia cenocepacia AU 1054 4093560 Bcen_R0014 tRNA Bcen_R0014 NC_008060.1 574786 574861 R tRNA-Thr complement(574786..574861) Burkholderia cenocepacia AU 1054 4093158 Bcen_R0017 tRNA Bcen_R0017 NC_008060.1 665799 665874 R tRNA-Asn complement(665799..665874) Burkholderia cenocepacia AU 1054 4092688 Bcen_R0018 tRNA Bcen_R0018 NC_008060.1 665947 666022 R tRNA-Asn complement(665947..666022) Burkholderia cenocepacia AU 1054 4092689 Bcen_R0019 tRNA Bcen_R0019 NC_008060.1 712015 712090 D tRNA-Gly 712015..712090 Burkholderia cenocepacia AU 1054 4092192 Bcen_R0020 tRNA Bcen_R0020 NC_008060.1 712144 712219 D tRNA-Gly 712144..712219 Burkholderia cenocepacia AU 1054 4092193 Bcen_R0021 tRNA Bcen_R0021 NC_008060.1 712271 712346 D tRNA-Gly 712271..712346 Burkholderia cenocepacia AU 1054 4093452 Bcen_R0022 tRNA Bcen_R0022 NC_008060.1 712446 712519 D tRNA-Cys 712446..712519 Burkholderia cenocepacia AU 1054 4093453 Bcen_R0024 tRNA Bcen_R0024 NC_008060.1 898109 898185 R tRNA-Pro complement(898109..898185) Burkholderia cenocepacia AU 1054 4093273 Bcen_R0025 tRNA Bcen_R0025 NC_008060.1 907484 907560 D tRNA-Arg 907484..907560 Burkholderia cenocepacia AU 1054 4093814 Bcen_R0026 tRNA Bcen_R0026 NC_008060.1 1083794 1083870 D tRNA-Val 1083794..1083870 Burkholderia cenocepacia AU 1054 4092148 Bcen_R0027 tRNA Bcen_R0027 NC_008060.1 1095564 1095640 D tRNA-Pro 1095564..1095640 Burkholderia cenocepacia AU 1054 4093297 Bcen_R0028 tRNA Bcen_R0028 NC_008060.1 1164581 1164667 R tRNA-Leu complement(1164581..1164667) Burkholderia cenocepacia AU 1054 4092166 Bcen_R0029 tRNA Bcen_R0029 NC_008060.1 1164930 1165016 R tRNA-Leu complement(1164930..1165016) Burkholderia cenocepacia AU 1054 4092167 Bcen_R0030 tRNA Bcen_R0030 NC_008060.1 1166305 1166391 R tRNA-Leu complement(1166305..1166391) Burkholderia cenocepacia AU 1054 4092169 Bcen_R0031 tRNA Bcen_R0031 NC_008060.1 1179175 1179251 R tRNA-Met complement(1179175..1179251) Burkholderia cenocepacia AU 1054 4093169 Bcen_R0032 tRNA Bcen_R0032 NC_008060.1 1187405 1187480 D tRNA-His 1187405..1187480 Burkholderia cenocepacia AU 1054 4093181 Bcen_R0038 tRNA Bcen_R0038 NC_008060.1 1786073 1786148 R tRNA-Ala complement(1786073..1786148) Burkholderia cenocepacia AU 1054 4093713 Bcen_R0039 tRNA Bcen_R0039 NC_008060.1 1786187 1786263 R tRNA-Ile complement(1786187..1786263) Burkholderia cenocepacia AU 1054 4093714 Bcen_R0041 tRNA Bcen_R0041 NC_008060.1 1818771 1818855 R tRNA-Leu complement(1818771..1818855) Burkholderia cenocepacia AU 1054 4093748 Bcen_R0042 tRNA Bcen_R0042 NC_008060.1 1944051 1944125 D tRNA-Arg 1944051..1944125 Burkholderia cenocepacia AU 1054 4092950 Bcen_R0043 tRNA Bcen_R0043 NC_008060.1 1962957 1963033 D tRNA-Met 1962957..1963033 Burkholderia cenocepacia AU 1054 4092086 Bcen_R0045 tRNA Bcen_R0045 NC_008060.1 2065365 2065449 D tRNA-Leu 2065365..2065449 Burkholderia cenocepacia AU 1054 4093069 Bcen_R0046 tRNA Bcen_R0046 NC_008060.1 2259311 2259387 D tRNA-Met 2259311..2259387 Burkholderia cenocepacia AU 1054 4091284 Bcen_R0048 tRNA Bcen_R0048 NC_008060.1 2414430 2414506 D tRNA-Gln 2414430..2414506 Burkholderia cenocepacia AU 1054 4092120 Bcen_R0049 tRNA Bcen_R0049 NC_008060.1 2751393 2751468 R tRNA-Phe complement(2751393..2751468) Burkholderia cenocepacia AU 1054 4093245 Bcen_R0050 tRNA Bcen_R0050 NC_008060.1 2770392 2770467 D tRNA-Lys 2770392..2770467 Burkholderia cenocepacia AU 1054 4093032 Bcen_R0053 tRNA Bcen_R0053 NC_008060.1 2815610 2815685 R tRNA-Ala complement(2815610..2815685) Burkholderia cenocepacia AU 1054 4092559 Bcen_R0054 tRNA Bcen_R0054 NC_008060.1 2815727 2815803 R tRNA-Ile complement(2815727..2815803) Burkholderia cenocepacia AU 1054 4092560 Bcen_R0056 tRNA Bcen_R0056 NC_008060.1 2935523 2935598 R tRNA-Thr complement(2935523..2935598) Burkholderia cenocepacia AU 1054 4091547 Bcen_R0058 tRNA Bcen_R0058 NC_008060.1 3040727 3040802 R tRNA-Trp complement(3040727..3040802) Burkholderia cenocepacia AU 1054 4092473 Bcen_R0059 tRNA Bcen_R0059 NC_008060.1 3042119 3042193 R tRNA-Thr complement(3042119..3042193) Burkholderia cenocepacia AU 1054 4092406 Bcen_R0060 tRNA Bcen_R0060 NC_008060.1 3042216 3042289 R tRNA-Gly complement(3042216..3042289) Burkholderia cenocepacia AU 1054 4092407 Bcen_R0061 tRNA Bcen_R0061 NC_008060.1 3042333 3042418 R tRNA-Tyr complement(3042333..3042418) Burkholderia cenocepacia AU 1054 4092408 Bcen_R0064 tRNA Bcen_R0064 NC_008060.1 3047892 3047967 R tRNA-Ala complement(3047892..3047967) Burkholderia cenocepacia AU 1054 4092411 Bcen_R0065 tRNA Bcen_R0065 NC_008060.1 3048006 3048082 R tRNA-Ile complement(3048006..3048082) Burkholderia cenocepacia AU 1054 4092412 Bcen_R0067 tRNA Bcen_R0067 NC_008060.1 3091966 3092041 R tRNA-Ala complement(3091966..3092041) Burkholderia cenocepacia AU 1054 4091699 Bcen_R0068 tRNA Bcen_R0068 NC_008060.1 3198615 3198690 R tRNA-Arg complement(3198615..3198690) Burkholderia cenocepacia AU 1054 4091328 Bcen_R0072 tRNA Bcen_R0072 NC_008061.1 98385 98461 D tRNA-Ile 98385..98461 Burkholderia cenocepacia AU 1054 4096129 Bcen_R0073 tRNA Bcen_R0073 NC_008061.1 98500 98575 D tRNA-Ala 98500..98575 Burkholderia cenocepacia AU 1054 4096130 Bcen_R0076 tRNA Bcen_R0076 NC_008061.1 483401 483485 R tRNA-Leu complement(483401..483485) Burkholderia cenocepacia AU 1054 4094070 Bcen_R0078 tRNA Bcen_R0078 NC_008061.1 1727663 1727741 R tRNA-Met complement(1727663..1727741) Burkholderia cenocepacia AU 1054 4094541 Bcen_R0079 tRNA Bcen_R0079 NC_008061.1 1934312 1934382 D tRNA-OTHER 1934312..1934382 Burkholderia cenocepacia AU 1054 4093999 Bcen_R0084 tRNA Bcen_R0084 NC_008062.1 419915 419991 D tRNA-Ile 419915..419991 Burkholderia cenocepacia AU 1054 4096990 Bcen_R0085 tRNA Bcen_R0085 NC_008062.1 420030 420105 D tRNA-Ala 420030..420105 Burkholderia cenocepacia AU 1054 4096991 Bcen_R0088 tRNA Bcen_R0088 NC_008062.1 453685 453775 R tRNA-Ser complement(453685..453775) Burkholderia cenocepacia AU 1054 4096625 Bcen_R0089 tRNA Bcen_R0089 NC_008062.1 483648 483722 R tRNA-Val complement(483648..483722) Burkholderia cenocepacia AU 1054 4097067 Bcen_R0090 tRNA Bcen_R0090 NC_008062.1 507896 507972 D tRNA-Met 507896..507972 Burkholderia cenocepacia AU 1054 4096709 Bcen_R0091 tRNA Bcen_R0091 NC_008062.1 588543 588636 D tRNA-Ser 588543..588636 Burkholderia cenocepacia AU 1054 4096646 Bcen_R0092 tRNA Bcen_R0092 NC_008062.1 609911 609986 D tRNA-Ala 609911..609986 Burkholderia cenocepacia AU 1054 4097028 Bcen_R0093 tRNA Bcen_R0093 NC_008062.1 610124 610199 D tRNA-Glu 610124..610199 Burkholderia cenocepacia AU 1054 4097029 Bcen_R0094 tRNA Bcen_R0094 NC_008062.1 610278 610354 D tRNA-Asp 610278..610354 Burkholderia cenocepacia AU 1054 4097030 Bcen_R0095 tRNA Bcen_R0095 NC_008062.1 610418 610493 D tRNA-Glu 610418..610493 Burkholderia cenocepacia AU 1054 4097031 Bcen_R0096 tRNA Bcen_R0096 NC_008062.1 610573 610649 D tRNA-Asp 610573..610649 Burkholderia cenocepacia AU 1054 4097032 Bcen_R0097 tRNA Bcen_R0097 NC_008062.1 610714 610789 D tRNA-Glu 610714..610789 Burkholderia cenocepacia AU 1054 4097033 Bcen_R0098 tRNA Bcen_R0098 NC_008062.1 610862 610938 D tRNA-Asp 610862..610938 Burkholderia cenocepacia AU 1054 4097072 Bcen_R0099 tRNA Bcen_R0099 NC_008062.1 741962 742048 D tRNA-Leu 741962..742048 Burkholderia cenocepacia AU 1054 4096880 Bcen_R0100 tRNA Bcen_R0100 NC_008062.1 757574 757649 D tRNA-Val 757574..757649 Burkholderia cenocepacia AU 1054 4096759 Bcen_R0101 tRNA Bcen_R0101 NC_008062.1 757673 757749 D tRNA-Asp 757673..757749 Burkholderia cenocepacia AU 1054 4096760 Bcen_R0002 rRNA Bcen_R0002 NC_008060.1 57385 58910 D 16S ribosomal RNA 57385..58910 Burkholderia cenocepacia AU 1054 4091724 Bcen_R0003 rRNA Bcen_R0003 NC_008060.1 59301 62181 D 23S ribosomal RNA 59301..62181 Burkholderia cenocepacia AU 1054 4091725 Bcen_R0004 rRNA Bcen_R0004 NC_008060.1 62333 62445 D 5S ribosomal RNA 62333..62445 Burkholderia cenocepacia AU 1054 4091726 Bcen_R0036 rRNA Bcen_R0036 NC_008060.1 1782649 1782761 R 5S ribosomal RNA complement(1782649..1782761) Burkholderia cenocepacia AU 1054 4092891 Bcen_R0037 rRNA Bcen_R0037 NC_008060.1 1782916 1785796 R 23S ribosomal RNA complement(1782916..1785796) Burkholderia cenocepacia AU 1054 4092892 Bcen_R0040 rRNA Bcen_R0040 NC_008060.1 1786326 1787852 R 16S ribosomal RNA complement(1786326..1787852) Burkholderia cenocepacia AU 1054 4093715 Bcen_R0051 rRNA Bcen_R0051 NC_008060.1 2812186 2812298 R 5S ribosomal RNA complement(2812186..2812298) Burkholderia cenocepacia AU 1054 4092557 Bcen_R0052 rRNA Bcen_R0052 NC_008060.1 2812453 2815334 R 23S ribosomal RNA complement(2812453..2815334) Burkholderia cenocepacia AU 1054 4092558 Bcen_R0055 rRNA Bcen_R0055 NC_008060.1 2815867 2817392 R 16S ribosomal RNA complement(2815867..2817392) Burkholderia cenocepacia AU 1054 4092561 Bcen_R0062 rRNA Bcen_R0062 NC_008060.1 3044471 3044583 R 5S ribosomal RNA complement(3044471..3044583) Burkholderia cenocepacia AU 1054 4092409 Bcen_R0063 rRNA Bcen_R0063 NC_008060.1 3044735 3047615 R 23S ribosomal RNA complement(3044735..3047615) Burkholderia cenocepacia AU 1054 4092410 Bcen_R0066 rRNA Bcen_R0066 NC_008060.1 3048145 3049671 R 16S ribosomal RNA complement(3048145..3049671) Burkholderia cenocepacia AU 1054 4092413 Bcen_R0071 rRNA Bcen_R0071 NC_008061.1 96796 98321 D 16S ribosomal RNA 96796..98321 Burkholderia cenocepacia AU 1054 4096128 Bcen_R0074 rRNA Bcen_R0074 NC_008061.1 98852 101732 D 23S ribosomal RNA 98852..101732 Burkholderia cenocepacia AU 1054 4096131 Bcen_R0075 rRNA Bcen_R0075 NC_008061.1 101887 101999 D 5S ribosomal RNA 101887..101999 Burkholderia cenocepacia AU 1054 4096132 Bcen_R0083 rRNA Bcen_R0083 NC_008062.1 418326 419851 D 16S ribosomal RNA 418326..419851 Burkholderia cenocepacia AU 1054 4096989 Bcen_R0086 rRNA Bcen_R0086 NC_008062.1 420382 423262 D 23S ribosomal RNA 420382..423262 Burkholderia cenocepacia AU 1054 4096992 Bcen_R0087 rRNA Bcen_R0087 NC_008062.1 423417 423529 D 5S ribosomal RNA 423417..423529 Burkholderia cenocepacia AU 1054 4096993