-- dump date 20140619_012623 -- class Genbank::CDS -- table cds_note -- id note YP_003603626.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: bxe:Bxe_A4462 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; ATPase AAA YP_003603627.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: bpy:Bphyt_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain YP_003603628.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: bxe:Bxe_A4460 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein YP_003603629.1 KEGG: bpy:Bphyt_0021 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit YP_003603630.1 KEGG: bpy:Bphyt_0022 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain YP_003603631.1 KEGG: bpy:Bphyt_0026 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_003603632.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: bpy:Bphyt_0028 transcriptional regulator, MerR family; SMART: regulatory protein MerR YP_003603633.1 KEGG: bpy:Bphyt_0029 hypothetical protein YP_003603634.1 KEGG: bxe:Bxe_A4436 ATP-dependent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase; helicase; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase YP_003603635.1 PFAM: aminotransferase class I and II; KEGG: bpy:Bphyt_0031 aminotransferase YP_003603636.1 KEGG: bxe:Bxe_A4434 ABC amino acid transporter, periplasmic ligand binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003603637.1 KEGG: bpy:Bphyt_0033 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain YP_003603638.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: bpy:Bphyt_0034 lysine exporter protein (LysE/YggA) YP_003603639.1 KEGG: bph:Bphy_6561 hypothetical protein YP_003603640.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bmj:BMULJ_03822 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003603641.1 PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A4425 phenylacetic acid degradation-related protein YP_003603642.1 PFAM: Patatin; KEGG: bxe:Bxe_A4424 patatin-like phospholipase protein YP_003603643.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bxe:Bxe_A4423 2-hydroxyacid dehydrogenase YP_003603644.1 KEGG: bxe:Bxe_A4422 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (GTP) YP_003603645.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_0305 transcriptional regulator, LysR family YP_003603646.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; KEGG: bpy:Bphyt_0306 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003603647.1 KEGG: bpy:Bphyt_0307 thioredoxin domain YP_003603648.1 KEGG: bpy:Bphyt_0308 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_003603649.1 TIGRFAM: peptide deformylase; KEGG: bph:Bphy_0035 peptide deformylase; PFAM: formylmethionine deformylase YP_003603650.1 KEGG: bpy:Bphyt_0310 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_003603651.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: bpy:Bphyt_0311 lysine exporter protein (LysE/YggA) YP_003603652.1 PFAM: peptidase M48; KEGG: bxe:Bxe_A4413 M48 family peptidase YP_003603653.1 KEGG: bxe:Bxe_A4412 Fmu, rRNA SAM-dependent methyltransferase; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein YP_003603654.1 KEGG: bpy:Bphyt_0314 hypothetical protein YP_003603655.1 KEGG: bxe:Bxe_A4410 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein YP_003603656.1 KEGG: bpy:Bphyt_0316 two component transcriptional regulator, fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver YP_003603657.1 KEGG: bpy:Bphyt_0317 ExsB protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_003603658.1 PFAM: Radical SAM domain protein; KEGG: bxe:Bxe_A4406 hypothetical protein YP_003603659.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bpy:Bphyt_0319 queuosine biosynthesis protein QueD YP_003603660.1 KEGG: bxe:Bxe_A4404 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase YP_003603661.1 KEGG: bxe:Bxe_A4403 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_003603662.1 KEGG: bpy:Bphyt_0322 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_003603663.1 TIGRFAM: penicillin-binding protein 2; KEGG: bpy:Bphyt_0323 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003603664.1 KEGG: bpy:Bphyt_0324 rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD YP_003603665.1 KEGG: bxe:Bxe_A4399 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_003603666.1 KEGG: bgl:bglu_1g33940 rod shape-determining protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_003603667.1 KEGG: bxe:Bxe_A4397 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit YP_003603668.1 KEGG: bpy:Bphyt_0328 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase YP_003603669.1 KEGG: bpy:Bphyt_0329 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase YP_003603670.1 PFAM: protein of unknown function DUF344; KEGG: bxe:Bxe_A4394 hypothetical protein YP_003603671.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: bxe:Bxe_A4393 exodeoxyribonucleaseiii xth; PFAM: Endonuclease/exonuclease/phosphatase YP_003603672.1 PFAM: peptidase M48; KEGG: bpy:Bphyt_0332 peptidase M48 YP_003603673.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4390 major facilitator superfamily (MFS)muropeptide transporter YP_003603674.1 KEGG: bpy:Bphyt_0334 methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; PFAM: methionine biosynthesis MetW protein YP_003603675.1 TIGRFAM: homoserine O-acetyltransferase; KEGG: bpy:Bphyt_0335 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_003603676.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_0336 nucleoid occlusion protein YP_003603677.1 KEGG: bxe:Bxe_A4386 HAD family hydrolase; TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003603678.1 TIGRFAM: acetylglutamate kinase; KEGG: bpy:Bphyt_0338 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003603679.1 KEGG: bpy:Bphyt_0340 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003603680.1 KEGG: bpy:Bphyt_0341 two component transcriptional regulator, fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver YP_003603681.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA; KEGG: bpy:Bphyt_0342 ATP-dependent protease ATP-binding subunit HslU; SMART: ATPase AAA YP_003603682.1 PFAM: 20S proteasome A and B subunits; KEGG: bxe:Bxe_A4380 ATP-dependent protease peptidase subunit YP_003603683.1 KEGG: bph:Bphy_0071 TraR/DksA family transcriptional regulator; TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type YP_003603684.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_A4377 hypothetical protein YP_003603685.1 SMART: PUA domain containing protein; KEGG: bpy:Bphyt_0346 PUA domain containing protein YP_003603686.1 KEGG: bxe:Bxe_A4375 site-specific tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_003603687.1 PFAM: protein of unknown function DUF484; KEGG: bxe:Bxe_A4374 hypothetical protein YP_003603688.1 TIGRFAM: diaminopimelate epimerase; KEGG: bpy:Bphyt_0349 diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003603689.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: bpy:Bphyt_0350 lipid A biosynthesis lauroyl acyltransferase YP_003603690.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: bpy:Bphyt_0351 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003603691.1 KEGG: bxe:Bxe_A4370 hypothetical protein YP_003603692.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: bpy:Bphyt_0353 phytanoyl-CoA dioxygenase YP_003603693.1 KEGG: bpy:Bphyt_0354 hypothetical protein YP_003603694.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_0355 aldo/keto reductase YP_003603695.1 KEGG: bpy:Bphyt_0356 hypothetical protein YP_003603696.1 KEGG: GF24738 gene product from transcript GF24738-RA YP_003603697.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0357 major facilitator superfamily MFS_1 YP_003603698.1 KEGG: bpy:Bphyt_0358 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003603699.1 KEGG: bxe:Bxe_A4363 RND efflux system membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003603700.1 PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A4362 AcrB/AcrD/AcrF family cation efflux protein YP_003603701.1 KEGG: bph:Bphy_0086 hypothetical protein YP_003603702.1 PFAM: aminoglycoside phosphotransferase; KEGG: bxe:Bxe_A4360 serine/threonine protein kinase YP_003603703.1 PFAM: transglutaminase domain protein; KEGG: bpy:Bphyt_0363 hypothetical protein YP_003603704.1 PFAM: PepSY-associated TM helix domain protein; KEGG: bxe:Bxe_A4358 hypothetical protein YP_003603705.1 PFAM: protein of unknown function DUF182; KEGG: bxe:Bxe_A4357 hypothetical protein YP_003603706.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bpy:Bphyt_0365 carbon monoxide dehydrogenase subunit G YP_003603707.1 PFAM: von Willebrand factor A; KEGG: bpy:Bphyt_0366 von Willebrand factor A YP_003603708.1 KEGG: bpy:Bphyt_0367 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003603709.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bpy:Bphyt_0368 molybdopterin dehydrogenase FAD-binding YP_003603710.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bxe:Bxe_A4352 xanthine dehydrogenase, molybdenum binding subunit apoprotein YP_003603711.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_A4351 carbon-monoxide dehydrogenase, small subunit (CoxS) YP_003603712.1 PFAM: amino acid permease-associated region; KEGG: bpy:Bphyt_0373 amino acid permease-associated region YP_003603713.1 KEGG: bxe:Bxe_A4347 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003603714.1 KEGG: bpy:Bphyt_0375 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein YP_003603715.1 KEGG: bxe:Bxe_A4345 ferredoxin--NADP reductase; PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein YP_003603716.1 KEGG: rso:RSc2525 hypothetical protein YP_003603717.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bxe:Bxe_A4337 metal-dependent hydrolase YP_003603718.1 KEGG: bxe:Bxe_A4336 hypothetical protein YP_003603719.1 KEGG: bpy:Bphyt_0386 ATPase AAA; PFAM: ATPase AAA; SMART: ATPase AAA YP_003603720.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_0387 FAD dependent oxidoreductase YP_003603721.1 PFAM: High potential iron-sulfur protein; Ergtoxin; KEGG: bxe:Bxe_A4333 high potential iron-sulfur protein YP_003603722.1 PFAM: Amidase; KEGG: bxe:Bxe_A4331 amidase YP_003603723.1 KEGG: bxe:Bxe_A4330 carboxymethylenebutenolidase; PFAM: dienelactone hydrolase YP_003603724.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bxe:Bxe_A4328 2-nitropropane dioxygenase YP_003603725.1 PFAM: Extracellular ligand-binding receptor; KEGG: bpy:Bphyt_0393 extracellular ligand-binding receptor YP_003603726.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4324 major facilitator transporter YP_003603727.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bxe:Bxe_A4323 hypothetical protein YP_003603728.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bxe:Bxe_A4321 HNS-like transcriptional regulator YP_003603729.1 KEGG: bpy:Bphyt_0399 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003603730.1 KEGG: bpy:Bphyt_0400 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003603731.1 KEGG: bxe:Bxe_A4318 hypothetical protein YP_003603732.1 KEGG: bxe:Bxe_A4317 metallo-beta-lactamase family protein YP_003603733.1 manually curated; TIGRFAM: rare lipoprotein A; KEGG: bxe:Bxe_A4315 rare lipoprotein A; PFAM: Rare lipoprotein A YP_003603734.1 KEGG: bac:BamMC406_2351 transposase IS3/IS911 family protein YP_003603735.1 PFAM: Integrase catalytic region; KEGG: bcj:BCAS0033 transposase YP_003603736.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bxe:Bxe_A4314 hypothetical protein YP_003603737.1 PFAM: protein of unknown function UPF0102; KEGG: bpy:Bphyt_0405 protein of unknown function UPF0102 YP_003603738.1 KEGG: bxe:Bxe_A4312 phosphoheptose isomerase YP_003603739.1 PFAM: transport-associated; KEGG: bxe:Bxe_A4311 periplasmic phospholipid binding protein YP_003603740.1 PFAM: cytochrome c class I; KEGG: bpy:Bphyt_0408 cytochrome c class I YP_003603741.1 KEGG: bgl:bglu_1g23570 phage-related integrase YP_003603742.1 KEGG: ctt:CtCNB1_4049 hypothetical protein; PFAM: helicase; SNF2-related protein; SMART: helicase; DEAD-like helicase YP_003603743.1 PFAM: protein of unknown function DUF1156; KEGG: ctt:CtCNB1_4047 adenine-specific DNA methylase YP_003603744.1 KEGG: ctt:CtCNB1_4046 hypothetical protein YP_003603745.1 KEGG: dac:Daci_2278 hypothetical protein YP_003603746.1 KEGG: dac:Daci_2277 hypothetical protein YP_003603747.1 KEGG: bmu:Bmul_0503 hypothetical protein YP_003603748.1 KEGG: noc:Noc_0670 hypothetical protein YP_003603749.1 KEGG: pna:Pnap_4272 ATPase central domain-containing protein; PFAM: ATPase AAA; SMART: ATPase AAA YP_003603750.1 PFAM: Heat shock protein 70; KEGG: noc:Noc_0667 heat shock protein HSP70 YP_003603751.1 KEGG: noc:Noc_0666 hypothetical protein YP_003603753.1 KEGG: hypothetical protein YP_003603755.1 KEGG: ddr:Deide_1p01585 hypothetical protein YP_003603756.1 KEGG: eca:ECA3636 hypothetical protein YP_003603757.1 KEGG: hna:Hneap_0096 hypothetical protein YP_003603758.1 KEGG: vex:VEA_003170 hypothetical protein YP_003603759.1 KEGG: cyc:PCC7424_3628 hypothetical protein; manually curated; PFAM: hypothetical protein YP_003603760.1 KEGG: bph:Bphy_5871 hypothetical protein YP_003603761.1 KEGG: tac:Ta0676 penicillin amidase precursor related protein YP_003603762.1 PFAM: transposase IS3/IS911 family protein; KEGG: bvi:Bcep1808_7044 transposase IS3/IS911 family protein YP_003603763.1 PFAM: Integrase catalytic region; KEGG: bte:BTH_I1930 transposase YP_003603764.1 KEGG: bcj:BCAL3081 hypothetical protein YP_003603765.1 KEGG: bcj:BCAL3079 hypothetical protein YP_003603766.1 PFAM: transposase IS4 family protein; KEGG: bpl:BURPS1106A_A2770 transposase, IS4 YP_003603769.1 KEGG: sds:SDEG_0054 hypothetical protein YP_003603770.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: lhk:LHK_02624 hypothetical protein YP_003603771.1 PFAM: SpoVT/AbrB domain protein; KEGG: afl:Aflv_0166 toxin-antiotoxin addiction module antitoxin component MazE YP_003603772.1 KEGG: rpa:RPA2287 hypothetical protein YP_003603773.1 KEGG: lch:Lcho_0954 integrase family protein; manually curated; PFAM: integrase family protein YP_003603774.1 PFAM: Prophage CP4-57 regulatory; KEGG: bph:Bphy_0241 phage transcriptional regulator, AlpA YP_003603775.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bgl:bglu_2g21230 anthranilate 1,2-dioxygenase, alpha subunit YP_003603776.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bpy:Bphyt_0410 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003603777.1 KEGG: bxe:Bxe_A4294 nucleobase/cation symporter, (NCS2) family; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_003603778.1 KEGG: bxe:Bxe_A4293 CPA1 family Na(+)/H(+) antiporter; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger YP_003603779.1 KEGG: bxe:Bxe_A4292 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_003603780.1 PFAM: CutC family protein; KEGG: bxe:Bxe_A4291 copper homeostasis protein CutC YP_003603781.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: bpy:Bphyt_0417 2-oxoacid ferredoxin oxidoreductase YP_003603782.1 PFAM: Ion transport 2 domain protein; KEGG: bxe:Bxe_A4289 inward rectifier potassium channel YP_003603783.1 KEGG: bpy:Bphyt_0466 periplasmic protein YP_003603784.1 KEGG: bpy:Bphyt_0421 hypothetical protein YP_003603785.1 KEGG: bpy:Bphyt_0422 hypothetical protein YP_003603786.1 PFAM: PfkB domain protein; KEGG: bpy:Bphyt_0423 PfkB domain protein YP_003603787.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bpy:Bphyt_0424 N-acylglucosamine 2-epimerase YP_003603788.1 KEGG: bpy:Bphyt_0425 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; Lipocalin family protein; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003603789.1 PFAM: Bile acid:sodium symporter; KEGG: bpy:Bphyt_0427 bile acid:sodium symporter YP_003603790.1 KEGG: bpy:Bphyt_0428 hypothetical protein YP_003603791.1 PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A4279 OmpC family outer membrane porin YP_003603792.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A4278 LysR family transcriptional regulator YP_003603793.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: bph:Bphy_0156 methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; ArgK protein YP_003603794.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bxe:Bxe_A4276 2-nitropropane dioxygenase YP_003603795.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A4275 hydrolase YP_003603796.1 KEGG: bpy:Bphyt_0434 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; regulatory protein MarR; SMART: transcription regulator, AsnC-type YP_003603797.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bpy:Bphyt_0435 protein of unknown function DUF6 transmembrane YP_003603798.1 KEGG: bpy:Bphyt_0436 beta-lactamase domain protein YP_003603799.1 PFAM: MaoC domain protein dehydratase; KEGG: bxe:Bxe_A4273 hypothetical protein YP_003603800.1 PFAM: protein of unknown function DUF1289; KEGG: bpy:Bphyt_0438 protein of unknown function DUF1289 YP_003603801.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bxe:Bxe_A4271 hypothetical protein YP_003603802.1 PFAM: pyruvate carboxyltransferase; KEGG: bxe:Bxe_A4270 hydroxymethylglutaryl-CoA lyase YP_003603803.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bpy:Bphyt_0441 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_003603804.1 PFAM: protein of unknown function DUF1234; KEGG: bxe:Bxe_A4268 hypothetical protein YP_003603805.1 KEGG: bpy:Bphyt_0443 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003603806.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: bpy:Bphyt_0444 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_003603807.1 KEGG: bpy:Bphyt_0445 dithiobiotin synthetase; TIGRFAM: dethiobiotin synthase YP_003603808.1 TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: bpy:Bphyt_0446 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_003603809.1 KEGG: bxe:Bxe_A4263 adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_003603810.1 KEGG: bxe:Bxe_A4260 hypothetical protein YP_003603811.1 KEGG: bpy:Bphyt_0458 hypothetical protein YP_003603812.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_0459 acyl-CoA dehydrogenase domain protein YP_003603813.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_0460 short chain dehydrogenase YP_003603814.1 KEGG: bpy:Bphyt_0461 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003603815.1 KEGG: bxe:Bxe_A4253 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase YP_003603816.1 KEGG: bpy:Bphyt_0464 transcriptional regulator, MerR family; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_003603817.1 KEGG: bpy:Bphyt_0465 beta-lactamase domain protein YP_003603818.1 manually curated; KEGG: dac:Daci_0892 hypothetical protein YP_003603819.1 KEGG: bac:BamMC406_0633 peptidoglycan-binding LysM; PFAM: peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003603820.1 KEGG: rso:RSc3429 hypothetical protein YP_003603821.1 PFAM: extracellular solute-binding protein family 5; KEGG: bpy:Bphyt_0468 extracellular solute-binding protein family 5 YP_003603822.1 PFAM: periplasmic binding protein; KEGG: bpy:Bphyt_0469 periplasmic binding protein YP_003603823.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_0470 short chain dehydrogenase YP_003603824.1 PFAM: DSBA oxidoreductase; KEGG: bxe:Bxe_A4247 thiol-disulfide interchange protein YP_003603825.1 PFAM: Sporulation domain protein; KEGG: bpy:Bphyt_0472 sporulation domain protein YP_003603826.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: bpy:Bphyt_0473 arginyl-tRNA synthetase YP_003603827.1 PFAM: Domain of unknown function DUF1840; KEGG: bxe:Bxe_A4244 hypothetical protein YP_003603828.1 KEGG: bpy:Bphyt_0475 acid shock protein YP_003603829.1 TIGRFAM: methionine synthase; KEGG: bph:Bphy_0190 methionine synthase; PFAM: dihydropteroate synthase DHPS; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region YP_003603830.1 PFAM: homocysteine S-methyltransferase; KEGG: bpy:Bphyt_0477 homocysteine S-methyltransferase YP_003603831.1 KEGG: bpy:Bphyt_0478 hypothetical protein YP_003603832.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_0479 alpha/beta hydrolase fold YP_003603833.1 KEGG: bpy:Bphyt_0480 hypothetical protein YP_003603834.1 KEGG: bxe:Bxe_A4236 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003603835.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bpy:Bphyt_0482 fumarylacetoacetate (FAA) hydrolase YP_003603837.1 PFAM: Extracellular ligand-binding receptor; KEGG: bpy:Bphyt_0483 extracellular ligand-binding receptor YP_003603838.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A4233 enoyl-CoA hydratase YP_003603839.1 KEGG: bxe:Bxe_A4232 hypothetical protein YP_003603840.1 KEGG: bxe:Bxe_A4230 hypothetical protein YP_003603841.1 KEGG: bpy:Bphyt_0487 RfaE bifunctional protein; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003603842.1 KEGG: bxe:Bxe_A4228 hypothetical protein YP_003603843.1 KEGG: bpy:Bphyt_0489 pantothenate kinase; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor YP_003603844.1 KEGG: bxe:Bxe_A4226 biotin--protein ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_003603845.1 PFAM: protein of unknown function DUF140; KEGG: bpy:Bphyt_0491 protein of unknown function DUF140 YP_003603846.1 KEGG: bpy:Bphyt_0492 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003603847.1 PFAM: Mammalian cell entry related domain protein; KEGG: bxe:Bxe_A4223 ABC transporter, periplasmic ligand binding protein YP_003603848.1 PFAM: protein of unknown function DUF330; KEGG: bxe:Bxe_A4222 hypothetical protein YP_003603849.1 PFAM: VanZ family protein; KEGG: bpy:Bphyt_0495 VanZ family protein YP_003603850.1 KEGG: bpy:Bphyt_0496 ferredoxin YP_003603851.1 KEGG: bpy:Bphyt_0497 hypothetical protein YP_003603852.1 KEGG: bpy:Bphyt_0498 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_003603853.1 PFAM: aminotransferase class IV; KEGG: bpy:Bphyt_0499 aminotransferase class IV YP_003603854.1 PFAM: protein of unknown function DUF493; KEGG: bpy:Bphyt_0500 protein of unknown function DUF493 YP_003603855.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A4215 DNA-binding transcriptional activator GcvA YP_003603856.1 KEGG: bxe:Bxe_A4214 hypothetical protein YP_003603857.1 TIGRFAM: lipoate-protein ligase B; KEGG: bxe:Bxe_A4213 lipoyltransferase; PFAM: biotin/lipoate A/B protein ligase YP_003603858.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: bxe:Bxe_A4212 lipoyl synthase; PFAM: Radical SAM domain protein YP_003603859.1 PFAM: Integrase catalytic region; KEGG: bcj:BCAS0033 transposase YP_003603860.1 KEGG: bac:BamMC406_2351 transposase IS3/IS911 family protein YP_003603861.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bxe:Bxe_A4202 cytoplasmic glycerophosphodiester phosphodiesterase YP_003603862.1 PFAM: sodium:dicarboxylate symporter; KEGG: bpy:Bphyt_0518 C4-dicarboxylate transporter DctA YP_003603863.1 KEGG: bxe:Bxe_A4196 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003603864.1 KEGG: bpy:Bphyt_0520 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_003603865.1 PFAM: Redoxin domain protein; KEGG: bpy:Bphyt_0521 redoxin domain protein YP_003603866.1 KEGG: bxe:Bxe_A4193 hypothetical protein YP_003603867.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: bpy:Bphyt_0523 Mg chelatase, subunit ChlI; SMART: ATPase AAA YP_003603868.1 PFAM: protein of unknown function DUF526; KEGG: bpy:Bphyt_0524 protein of unknown function DUF526 YP_003603869.1 PFAM: nitrogen regulatory protein P-II; KEGG: bpy:Bphyt_0525 nitrogen regulatory protein P-II YP_003603870.1 KEGG: bxe:Bxe_A4189 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_003603871.1 KEGG: bpy:Bphyt_0527 glutamate/cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA YP_003603872.1 TIGRFAM: glutathione synthetase; KEGG: bpy:Bphyt_0528 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein YP_003603873.1 PFAM: PTS system fructose subfamily IIA component; KEGG: bpy:Bphyt_0529 PTS system fructose subfamily IIA component YP_003603874.1 KEGG: bpy:Bphyt_0530 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_003603875.1 KEGG: bxe:Bxe_A4184 phosphoenolpyruvate--protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_003603876.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bxe:Bxe_A4183 molybdopterin biosynthesis protein YP_003603877.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: bxe:Bxe_A4182 peptidase S41A; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein YP_003603878.1 TIGRFAM: phosphoglycerate mutase 1 family; KEGG: bpy:Bphyt_0534 phosphoglycerate mutase 1 family; PFAM: phosphoglycerate mutase YP_003603879.1 KEGG: bpy:Bphyt_0535 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003603880.1 KEGG: bpy:Bphyt_0536 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin YP_003603881.1 KEGG: bxe:Bxe_A4178 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB YP_003603882.1 KEGG: bxe:Bxe_A4177 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein YP_003603883.1 KEGG: bpy:Bphyt_0539 Appr-1-p processing domain protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_003603884.1 KEGG: bpy:Bphyt_0540 RNA methyltransferase, TrmH family, group 2; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_003603885.1 PFAM: phosphoribosyltransferase; KEGG: bpy:Bphyt_0541 phosphoribosyltransferase YP_003603886.1 KEGG: bxe:Bxe_A4173 hypothetical protein; manually curated; PFAM: methyltransferase type 11 YP_003603887.1 PFAM: Protein of unknown function DUF2244, transmembrane; KEGG: bxe:Bxe_A4172 hypothetical protein YP_003603888.1 KEGG: bxe:Bxe_A4171 cytochrome c oxidase; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c class I; OmpA/MotB domain protein YP_003603889.1 TIGRFAM: cytochrome c oxidase, subunit I; KEGG: bpy:Bphyt_0545 cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_003603890.1 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: bxe:Bxe_A4169 cytochrome c oxidase assembly protein YP_003603891.1 KEGG: bxe:Bxe_A4168 hypothetical protein YP_003603892.1 KEGG: bxe:Bxe_A4167 cytochrome c oxidase, subunit III; PFAM: cytochrome c oxidase subunit III YP_003603893.1 KEGG: bpy:Bphyt_0550 hypothetical protein YP_003603894.1 PFAM: Surfeit locus 1 family protein; KEGG: bpy:Bphyt_0551 hypothetical protein YP_003603895.1 KEGG: bxe:Bxe_A4164 hypothetical protein YP_003603896.1 PFAM: cytochrome oxidase assembly; KEGG: bxe:Bxe_A4163 cytochrome oxidase assembly protein YP_003603897.1 KEGG: bpy:Bphyt_0554 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_003603898.1 PFAM: electron transport protein SCO1/SenC; KEGG: bpy:Bphyt_0555 electron transport protein SCO1/SenC YP_003603899.1 PFAM: YCII-related; KEGG: bpy:Bphyt_0556 YCII-related YP_003603900.1 KEGG: bpy:Bphyt_0558 lipoprotein, YaeC family; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_003603901.1 KEGG: bpy:Bphyt_0559 transcriptional regulator, MarR family with acetyltransferase activity; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR YP_003603902.1 KEGG: bxe:Bxe_A4156 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003603903.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: bxe:Bxe_A4155 N-acetylglucosamine 6-phosphate deacetylase; PFAM: amidohydrolase YP_003603904.1 KEGG: bpy:Bphyt_0562 glutamine--fructose-6-phosphate transaminase (isomerizing); PFAM: sugar isomerase (SIS) YP_003603905.1 KEGG: bpy:Bphyt_0563 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_003603906.1 KEGG: bxe:Bxe_A4152 PTS system, N-acetylglucosamine-specific IIBC component; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site YP_003603907.1 KEGG: bpy:Bphyt_0566 cyd operon protein YbgT; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein YP_003603908.1 KEGG: bpy:Bphyt_0567 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_003603909.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bpy:Bphyt_0568 cytochrome bd ubiquinol oxidase subunit I YP_003603910.1 KEGG: bpy:Bphyt_0569 hypothetical protein YP_003603911.1 KEGG: bxe:Bxe_A4146 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_003603912.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: bpy:Bphyt_0571 hypothetical protein YP_003603913.1 KEGG: bxe:Bxe_A4144 hypothetical protein YP_003603914.1 PFAM: pyruvate carboxyltransferase; KEGG: bpy:Bphyt_0573 2-isopropylmalate synthase YP_003603915.1 PFAM: glycosyl transferase, family 3-like; KEGG: bxe:Bxe_A4143 glycosyl transferase family protein YP_003603916.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_A4142 fumarylacetoacetate (FAA) hydrolase YP_003603917.1 TIGRFAM: maleylacetoacetate isomerase; KEGG: bpy:Bphyt_0577 maleylacetoacetate isomerase; PFAM: glutathione S-transferase domain YP_003603918.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: bpy:Bphyt_0578 signal recognition particle-docking protein FtsY; SMART: ATPase AAA YP_003603919.1 TIGRFAM: methyltransferase; KEGG: bxe:Bxe_A4139 hypothetical protein; PFAM: Protein of unknown function methylase YP_003603920.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: bpy:Bphyt_0580 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_003603921.1 KEGG: bmj:BMULJ_00429 hypothetical protein YP_003603922.1 KEGG: sgr:SGR_5362 aminotransferase YP_003603923.1 KEGG: bmj:BMULJ_02753 hypothetical protein YP_003603924.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bpy:Bphyt_0581 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003603925.1 KEGG: bpy:Bphyt_0582 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003603926.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: bxe:Bxe_A4135 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003603927.1 KEGG: bxe:Bxe_A4134 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like YP_003603928.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: bxe:Bxe_A4133 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003603929.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: bxe:Bxe_A4132 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003603930.1 KEGG: bpy:Bphyt_0587 outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB YP_003603931.1 PFAM: hypothetical protein; hypothetical protein; KEGG: bpy:Bphyt_0588 hypothetical protein YP_003603932.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: bpy:Bphyt_0589 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; zinc finger Fpg domain protein YP_003603933.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: bxe:Bxe_A4128 A/G-specific DNA-adenine glycosylase; SMART: HhH-GPD family protein YP_003603934.1 KEGG: bpy:Bphyt_0591 peptidase S16 lon domain protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein YP_003603935.1 PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A4126 hypothetical protein YP_003603936.1 PFAM: HPr serine kinase domain protein; KEGG: bpy:Bphyt_0593 HPr kinase/phosphorylase YP_003603937.1 KEGG: bpy:Bphyt_0594 PTS IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_003603938.1 KEGG: bpy:Bphyt_0595 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_003603939.1 KEGG: bpy:Bphyt_0596 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor YP_003603940.1 KEGG: bpy:Bphyt_0597 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003603941.1 KEGG: bxe:Bxe_A4120 hypothetical protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein YP_003603942.1 PFAM: protein of unknown function DUF1239; KEGG: bxe:Bxe_A4119 hypothetical protein YP_003603943.1 KEGG: bpy:Bphyt_0600 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA YP_003603944.1 SMART: hypothetical protein; TIGRFAM: KpsF/GutQ family protein; KEGG: bpy:Bphyt_0601 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); hypothetical protein YP_003603945.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; KEGG: bpy:Bphyt_0602 sodium/hydrogen exchanger YP_003603946.1 TIGRFAM: adenine phosphoribosyltransferase; KEGG: bpy:Bphyt_0603 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003603947.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: bpy:Bphyt_0604 lysine exporter protein (LysE/YggA) YP_003603948.1 PFAM: NUDIX hydrolase; KEGG: bpy:Bphyt_0605 NUDIX hydrolase YP_003603949.1 KEGG: bpy:Bphyt_0606 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_003603950.1 PFAM: PepSY-associated TM helix domain protein; KEGG: bpy:Bphyt_0607 PepSY-associated TM helix domain protein YP_003603951.1 KEGG: bxe:Bxe_A4109 hypothetical protein YP_003603952.1 KEGG: bpy:Bphyt_0609 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_003603953.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0610 major facilitator superfamily MFS_1 YP_003603954.1 KEGG: bpy:Bphyt_0611 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003603955.1 KEGG: bpy:Bphyt_0619 hypothetical protein YP_003603956.1 KEGG: bpy:Bphyt_0620 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003603957.1 PFAM: cytochrome c class I; KEGG: bpy:Bphyt_0621 cytochrome c class I YP_003603958.1 PFAM: cytochrome c oxidase subunit I; KEGG: bxe:Bxe_A4078 cytochrome c oxidase, subunit I YP_003603959.1 PFAM: cytochrome c oxidase subunit II; KEGG: bpy:Bphyt_0623 cytochrome c oxidase subunit II YP_003603960.1 KEGG: bxe:Bxe_A4076 hypothetical protein YP_003603961.1 KEGG: bpy:Bphyt_0625 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_003603962.1 KEGG: bxe:Bxe_A4074 periplasmic cytochrome c protein YP_003603963.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A4073 LysR family transcriptional regulator YP_003603964.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0628 major facilitator superfamily MFS_1 YP_003603965.1 KEGG: bxe:Bxe_A4071 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003603966.1 KEGG: bxe:Bxe_A4070 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_003603967.1 KEGG: bxe:Bxe_A4069 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_003603968.1 PFAM: major intrinsic protein; KEGG: bpy:Bphyt_0632 major intrinsic protein YP_003603969.1 KEGG: mlu:Mlut_12350 conserved hypothetical protein TIGR00046 YP_003603970.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; PAS fold-4 domain protein; response regulator receiver; Hpt domain protein; KEGG: bxe:Bxe_A4067 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; response regulator receiver YP_003603971.1 KEGG: bxe:Bxe_A4065 hypothetical protein; PFAM: CHRD domain containing protein; SMART: CHRD domain containing protein YP_003603972.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bpy:Bphyt_0635 alpha/beta hydrolase fold-3 domain protein YP_003603973.1 KEGG: bpy:Bphyt_0636 hypothetical protein YP_003603974.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4062 major facilitator superfamily multidrug efflux transporter YP_003603975.1 KEGG: bpy:Bphyt_0638 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003603976.1 PFAM: alanine racemase domain protein; KEGG: bpy:Bphyt_0639 D-serine deaminase (d-serine dehydratase) protein YP_003603977.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bxe:Bxe_A4059 RpiR family transcriptional regulator YP_003603978.1 KEGG: bxe:Bxe_A4058 N-acyl-D-amino-acid deacylase; PFAM: Amidohydrolase 3; D-aminoacylase domain protein YP_003603979.1 PFAM: Endoribonuclease L-PSP; KEGG: bpy:Bphyt_0642 endoribonuclease L-PSP YP_003603980.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: bxe:Bxe_A4056 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_003603981.1 KEGG: bpy:Bphyt_0644 5'-nucleotidase; PFAM: 5-nucleotidase YP_003603982.1 KEGG: bxe:Bxe_A4054 threonine dehydratase; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain protein YP_003603983.1 PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bpy:Bphyt_0646 FAD linked oxidase domain protein YP_003603984.1 PFAM: histidine triad (HIT) protein; KEGG: bxe:Bxe_A4052 hypothetical protein YP_003603985.1 PFAM: protein of unknown function DUF971; KEGG: bxe:Bxe_A4051 hypothetical protein YP_003603986.1 KEGG: bpy:Bphyt_0649 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_003603987.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: bxe:Bxe_A4049 hypothetical protein YP_003603988.1 PFAM: Sterol-binding domain protein; KEGG: bpy:Bphyt_0651 sterol-binding domain protein YP_003603989.1 KEGG: bxe:Bxe_A4047 ubiquinone biosynthesis protein UbiB; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein YP_003603990.1 PFAM: thiopurine S-methyltransferase; KEGG: bxe:Bxe_A4046 hypothetical protein YP_003603991.1 KEGG: bxe:Bxe_A4045 hypothetical protein; TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB YP_003603992.1 PFAM: protein of unknown function DUF502; KEGG: bxe:Bxe_A4044 hypothetical protein YP_003603993.1 KEGG: bxe:Bxe_A4043 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_003603994.1 PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A4042 dATP pyrophosphohydrolase YP_003603995.1 KEGG: bpy:Bphyt_0658 phospholipase D/transphosphatidylase; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase YP_003603996.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_0660 transcriptional regulator, TetR family YP_003603997.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A4038 acyl-CoA dehydrogenase oxidoreductase YP_003603998.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_0662 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_003603999.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bxe:Bxe_A4036 acetyl-CoA acetyltransferase YP_003604000.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_0664 enoyl-CoA hydratase YP_003604001.1 KEGG: bpy:Bphyt_0665 formate dehydrogenase family accessory protein FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_003604002.1 PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_A4033 hypothetical protein YP_003604003.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: bpy:Bphyt_0667 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_003604004.1 PFAM: glutathione S-transferase domain; KEGG: bxe:Bxe_A4031 glutathione S-transferase YP_003604005.1 PFAM: thioesterase superfamily protein; KEGG: bpy:Bphyt_0671 thioesterase superfamily protein YP_003604006.1 KEGG: bxe:Bxe_A4027 ABC transporter, fused ATPase and inner membrane subunits; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: ATPase AAA YP_003604007.1 PFAM: nucleotidyl transferase; KEGG: bpy:Bphyt_0673 nucleotidyl transferase YP_003604008.1 PFAM: aminoglycoside phosphotransferase; KEGG: bxe:Bxe_A4025 hypothetical protein YP_003604009.1 PFAM: Organic solvent tolerance protein; KEGG: bxe:Bxe_A4024 organic solvent tolerance protein YP_003604010.1 PFAM: SurA domain; peptidyl-prolyl cis-trans isomerase; KEGG: bpy:Bphyt_0676 SurA domain YP_003604011.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bpy:Bphyt_0677 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_003604012.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: bxe:Bxe_A4021 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_003604013.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A4020 DMT family permease YP_003604014.1 TIGRFAM: lactoylglutathione lyase; KEGG: bav:BAV0701 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_003604015.1 KEGG: bph:Bphy_6677 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003604016.1 KEGG: bph:Bphy_6678 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003604017.1 KEGG: bph:Bphy_6679 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003604018.1 KEGG: bph:Bphy_6680 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003604019.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; KEGG: bph:Bphy_6681 IclR family transcriptional regulator YP_003604020.1 PFAM: protein of unknown function DUF45; KEGG: bpy:Bphyt_0683 protein of unknown function DUF45 YP_003604021.1 KEGG: bpy:Bphyt_0684 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003604022.1 KEGG: bxe:Bxe_A4014 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003604023.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: bpy:Bphyt_0686 glycyl-tRNA synthetase subunit beta YP_003604024.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: bxe:Bxe_A4012 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit YP_003604025.1 KEGG: drm:Dred_0903 helix-turn-helix domain-containing protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_003604026.1 KEGG: ajs:Ajs_0506 metallophosphoesterase YP_003604027.1 manually curated; KEGG: yen:YE4110 hypothetical protein YP_003604028.1 KEGG: pna:Pnap_4834 hypothetical protein YP_003604029.1 KEGG: bps:BPSL0761 hypothetical protein YP_003604030.1 KEGG: pna:Pnap_4884 hypothetical protein YP_003604031.1 KEGG: hypothetical protein YP_003604032.1 KEGG: bbt:BBta_5008 hypothetical protein YP_003604033.1 KEGG: mlu:Mlut_12400 coproporphyrinogen III oxidase, anaerobic YP_003604034.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-4 domain protein; KEGG: aca:ACP_0517 sensory box-containing diguanylate cyclase; SMART: GGDEF domain containing protein; PAS domain containing protein YP_003604035.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_5418 NUDIX family hydrolase YP_003604036.1 KEGG: hha:Hhal_1150 hypothetical protein YP_003604037.1 KEGG: vap:Vapar_4573 hypothetical protein YP_003604038.1 manually curated; KEGG: bxe:Bxe_A2487 hypothetical protein YP_003604039.1 KEGG: bxe:Bxe_B0407 hypothetical protein YP_003604040.1 KEGG: bpy:Bphyt_0200 hypothetical protein YP_003604041.1 KEGG: bpy:Bphyt_5696 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003604042.1 KEGG: bxe:Bxe_B0144 histone-like nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_003604043.1 KEGG: bpy:Bphyt_4466 hypothetical protein YP_003604044.1 KEGG: bpy:Bphyt_4467 hypothetical protein YP_003604045.1 PFAM: Protein of unknown function DUF2167, membrane; KEGG: ctt:CtCNB1_2266 transmembrane protein YP_003604046.1 KEGG: ctt:CtCNB1_2265 hypothetical protein YP_003604047.1 KEGG: eic:NT01EI_0700 DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003604048.1 KEGG: xca:xccb100_3123 membrane-anchored nucleotide-binding enzyme YP_003604049.1 KEGG: hne:HNE_0466 hypothetical protein YP_003604050.1 KEGG: eum:ECUMN_2408 hypothetical protein YP_003604051.1 KEGG: cyn:Cyan7425_2108 serine/threonine phosphoprotein phosphatase YP_003604052.1 KEGG: ecq:ECED1_2419 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_003604053.1 KEGG: proteophosphoglycan 5 YP_003604054.1 KEGG: pfo:Pfl01_2135 hypothetical protein YP_003604055.1 KEGG: cms:CMS_3113 hypothetical protein; manually curated; PFAM: protein of unknown function DUF37 YP_003604056.1 KEGG: bcm:Bcenmc03_7075 lipoprotein-like protein YP_003604057.1 KEGG: pol:Bpro_5347 DNA topoisomerase; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; DNA topoisomerase I ATP-binding YP_003604058.1 KEGG: pol:Bpro_5348 hypothetical protein YP_003604059.1 KEGG: pol:Bpro_5349 hypothetical protein YP_003604060.1 KEGG: cph:Cpha266_0770 hypothetical protein YP_003604061.1 KEGG: pfs:PFLU0016 ribosomal RNA small subunit methyltransferase B YP_003604062.1 SMART: ATPase AAA; KEGG: pol:Bpro_1706 ATP-dependent exoDNAse (exonuclease V), alpha subunit YP_003604063.1 manually curated; KEGG: pol:Bpro_1707 hypothetical protein YP_003604064.1 KEGG: bxe:Bxe_B0034 hypothetical protein YP_003604065.1 PFAM: integrase family protein; KEGG: rsq:Rsph17025_0725 phage integrase family protein YP_003604066.1 KEGG: acr:Acry_0811 phage integrase family protein YP_003604067.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: bpy:Bphyt_0688 ferredoxin-dependent glutamate synthase YP_003604068.1 KEGG: bpy:Bphyt_0689 tRNA-specific 2-thiouridylase MnmA; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like YP_003604069.1 PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A4009 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_003604070.1 KEGG: bpy:Bphyt_0691 NAD(P)(+) transhydrogenase (AB-specific); PFAM: alanine dehydrogenase/PNT domain protein YP_003604071.1 KEGG: bpy:Bphyt_0692 NAD(P) transhydrogenase subunit alpha YP_003604072.1 KEGG: bxe:Bxe_A4006 NAD(P) transhydrogenase, beta subunit; PFAM: NAD(P) transhydrogenase beta subunit YP_003604073.1 PFAM: hypothetical protein; KEGG: bpy:Bphyt_0694 hypothetical protein YP_003604074.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpy:Bphyt_0695 glyoxalase/bleomycin resistance protein/dioxygenase YP_003604075.1 KEGG: bvi:Bcep1808_6282 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003604076.1 PFAM: RNA methylase; THUMP domain protein; KEGG: bxe:Bxe_A4003 hypothetical protein YP_003604077.1 PFAM: protein of unknown function DUF330; KEGG: bxe:Bxe_A4001 hypothetical protein YP_003604078.1 PFAM: Mammalian cell entry related domain protein; KEGG: bpy:Bphyt_0709 mammalian cell entry related domain protein YP_003604079.1 PFAM: Paraquat-inducible protein A; KEGG: bxe:Bxe_A3999 paraquat-inducible protein YP_003604080.1 PFAM: Paraquat-inducible protein A; KEGG: bpy:Bphyt_0707 paraquat-inducible protein A YP_003604081.1 PFAM: cytochrome B561; KEGG: bpy:Bphyt_0706 cytochrome b561 YP_003604082.1 PFAM: YceI family protein; KEGG: bpy:Bphyt_0705 YceI family protein YP_003604083.1 PFAM: YceI family protein; KEGG: bpy:Bphyt_0704 YceI family protein YP_003604084.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0703 major facilitator superfamily MFS_1 YP_003604085.1 KEGG: bxe:Bxe_A3993 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003604086.1 KEGG: bxe:Bxe_A3992 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_003604087.1 KEGG: bxe:Bxe_A3991 preprotein translocase subunit YajC; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_003604088.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: bxe:Bxe_A3990 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_003604089.1 KEGG: bpy:Bphyt_0698 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_003604090.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase; nucleic acid binding OB-fold tRNA/helicase-type; helicase; KEGG: bpy:Bphyt_0697 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase YP_003604091.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_2522 LysR family transcriptional regulator YP_003604093.1 KEGG: bpy:Bphyt_0712 catalase; PFAM: Catalase related subgroup; Catalase domain protein YP_003604094.1 KEGG: bxe:Bxe_A3985 hypothetical protein YP_003604095.1 PFAM: ferritin Dps family protein; KEGG: bpy:Bphyt_0714 ferritin Dps family protein YP_003604096.1 KEGG: bpy:Bphyt_0715 4-hydroxybenzoate polyprenyl transferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase YP_003604097.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: bxe:Bxe_A3982 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003604098.1 PFAM: alanine racemase domain protein; KEGG: bxe:Bxe_A3981 hypothetical protein YP_003604099.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bpy:Bphyt_0718 glycolate oxidase iron-sulfur subunit YP_003604100.1 PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A3979 glycolate oxidase FAD binding subunit YP_003604101.1 PFAM: FAD linked oxidase domain protein; KEGG: bpy:Bphyt_0720 FAD linked oxidase domain protein YP_003604102.1 PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A3977 FAD-binding oxidase YP_003604103.1 KEGG: bpy:Bphyt_0722 ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_003604104.1 KEGG: bpy:Bphyt_0723 transcriptional regulator, XRE family; PFAM: hypothetical protein; SMART: hypothetical protein YP_003604105.1 PFAM: protein of unknown function DUF891; KEGG: bxe:Bxe_A3974 hypothetical protein YP_003604106.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bpy:Bphyt_0725 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003604107.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bpy:Bphyt_0726 peptidase U62 modulator of DNA gyrase YP_003604108.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bpy:Bphyt_0727 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003604109.1 KEGG: bxe:Bxe_A3970 hypothetical protein YP_003604110.1 KEGG: bpy:Bphyt_0729 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase YP_003604111.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: bpy:Bphyt_0730 DNA repair protein RecN; SMART: ATPase AAA YP_003604112.1 PFAM: ATP-NAD/AcoX kinase; KEGG: bxe:Bxe_A3967 NAD(+)/NADH kinase family protein YP_003604113.1 KEGG: bxe:Bxe_A3966 heat-inducible transcription repressor; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein YP_003604114.1 TIGRFAM: ferrochelatase; KEGG: bxe:Bxe_A3965 ferrochelatase; PFAM: ferrochelatase YP_003604115.1 KEGG: bpy:Bphyt_0734 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003604116.1 PFAM: GrpE protein; KEGG: bpy:Bphyt_0736 GrpE protein YP_003604117.1 KEGG: bxe:Bxe_A3961 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_003604118.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: bpy:Bphyt_0738 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_003604119.1 KEGG: bpy:Bphyt_0739 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; aminotransferase class IV YP_003604120.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: bxe:Bxe_A3958 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003604121.1 PFAM: deoxynucleoside kinase; KEGG: bpy:Bphyt_0742 deoxynucleoside kinase YP_003604122.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: bxe:Bxe_A3956 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_003604123.1 TIGRFAM: poly(A) polymerase; KEGG: bxe:Bxe_A3955 poly(A) polymerase; PFAM: polynucleotide adenylyltransferase region YP_003604124.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: bxe:Bxe_A3954 HAD family hydrolase YP_003604125.1 KEGG: bxe:Bxe_A3953 DnaA regulatory inactivator Hda; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA YP_003604126.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: bpy:Bphyt_0748 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003604127.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: bpy:Bphyt_0749 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003604128.1 KEGG: bxe:Bxe_A3934 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_003604129.1 PFAM: SNARE associated Golgi protein; KEGG: bxe:Bxe_A3933 DedA family transmembrane protein YP_003604130.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bpy:Bphyt_0752 MscS mechanosensitive ion channel YP_003604131.1 KEGG: bpy:Bphyt_0753 hypothetical protein YP_003604132.1 KEGG: bcm:Bcenmc03_5834 hypothetical protein YP_003604133.1 KEGG: bpy:Bphyt_2080 hypothetical protein YP_003604134.1 TIGRFAM: tol-pal system protein YbgF; KEGG: bpy:Bphyt_0757 tol-pal system protein YbgF YP_003604135.1 KEGG: bxe:Bxe_A3921 OmpA/MotB family outer membrane protein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_003604136.1 KEGG: bxe:Bxe_A3920 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller YP_003604137.1 KEGG: bxe:Bxe_A3919 TonB protein; TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA YP_003604138.1 KEGG: bpy:Bphyt_0761 protein TolR; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR YP_003604139.1 KEGG: bph:Bphy_2452 protein TolQ; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel YP_003604140.1 KEGG: bpy:Bphyt_0763 tol-pal system-associated acyl-CoA thioesterase; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein YP_003604141.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_0764 short-chain dehydrogenase/reductase SDR YP_003604142.1 KEGG: bpy:Bphyt_0765 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_003604143.1 PFAM: ATP-cone domain protein; KEGG: bxe:Bxe_A3913 transcriptional regulator NrdR YP_003604144.1 KEGG: bpy:Bphyt_0767 hypothetical protein YP_003604145.1 KEGG: bpy:Bphyt_0768 hypothetical protein YP_003604146.1 KEGG: bpy:Bphyt_0769 hypothetical protein YP_003604147.1 KEGG: bpy:Bphyt_0770 hypothetical protein YP_003604148.1 KEGG: bxe:Bxe_A3909 hypothetical protein YP_003604149.1 KEGG: bxe:Bxe_A3908 hypothetical protein YP_003604150.1 PFAM: Protein of unknown function DUF2311, membrane; KEGG: bxe:Bxe_A3907 transmembrane protein YP_003604151.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bph:Bphy_2440 protein of unknown function DUF883 ElaB YP_003604152.1 KEGG: bxe:Bxe_A3905 1-Cys peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_003604153.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_0776 acyl-CoA dehydrogenase domain protein YP_003604154.1 KEGG: bpy:Bphyt_0777 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003604155.1 PFAM: EAL domain protein; KEGG: bpy:Bphyt_0778 diguanylate phosphodiesterase YP_003604156.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0779 major facilitator superfamily MFS_1 YP_003604157.1 TIGRFAM: homogentisate 1,2-dioxygenase; KEGG: bxe:Bxe_A3900 homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase YP_003604158.1 TIGRFAM: fumarylacetoacetase; KEGG: bxe:Bxe_A3899 fumarylacetoacetate hydrolase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase YP_003604159.1 KEGG: bpy:Bphyt_3192 hypothetical protein; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_003604160.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0783 major facilitator superfamily MFS_1 YP_003604161.1 KEGG: sro:Sros_1406 serine/threonine protein kinase-like protein YP_003604162.1 KEGG: reh:H16_A2495 hypothetical protein YP_003604163.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0784 major facilitator superfamily MFS_1 YP_003604164.1 PFAM: polyketide cyclase/dehydrase; KEGG: bra:BRADO6767 hypothetical protein YP_003604165.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_0785 enoyl-CoA hydratase YP_003604166.1 KEGG: bpy:Bphyt_0786 hypothetical protein YP_003604167.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bpy:Bphyt_0787 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_003604168.1 PFAM: aminotransferase class V; KEGG: bpy:Bphyt_0791 aminotransferase class V YP_003604169.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: bac:BamMC406_1119 ATP-grasp enzyme-like protein YP_003604170.1 PFAM: monooxygenase FAD-binding; KEGG: bam:Bamb_6485 oxidoreductase YP_003604171.1 PFAM: polysaccharide deacetylase; KEGG: bpy:Bphyt_0854 polysaccharide deacetylase YP_003604172.1 PFAM: glycosyl transferase group 1; KEGG: bpy:Bphyt_0856 glycosyl transferase group 1 YP_003604173.1 KEGG: GG16353 gene product from transcript GG16353-RA YP_003604174.1 TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; KEGG: bcm:Bcenmc03_6747 exopolysaccharide transport protein family; SMART: ATPase AAA YP_003604175.1 PFAM: glycosyl transferase group 1; KEGG: gme:Gmet_2880 glycosyl transferase, group 1 YP_003604176.1 KEGG: rpa:RPA4581 hypothetical protein YP_003604177.1 PFAM: glycosyl transferase family 2; KEGG: bvi:Bcep1808_5619 glycosyl transferase family protein YP_003604178.1 KEGG: mmi:MMAR_0614 membrane protein, IniB YP_003604179.1 PFAM: polysaccharide biosynthesis protein; KEGG: ddc:Dd586_1248 polysaccharide biosynthesis protein YP_003604180.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3887 major facilitator superfamily transporter YP_003604182.1 KEGG: bxe:Bxe_A3886 xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; ferredoxin; CO dehydrogenase flavoprotein domain protein YP_003604183.1 TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; KEGG: bxe:Bxe_A3885 xanthine dehydrogenase, molybdenum binding subunit apoprotein / xanthine oxidase; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead YP_003604184.1 TIGRFAM: xanthine dehydrogenase accessory protein XdhC; KEGG: bpy:Bphyt_0795 xanthine dehydrogenase accessory protein XdhC YP_003604185.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_0796 transcriptional regulator, LysR family YP_003604186.1 PFAM: DSBA oxidoreductase; KEGG: bxe:Bxe_A3882 isomerase YP_003604187.1 KEGG: bxe:Bxe_A3881 hypothetical protein YP_003604188.1 KEGG: bpy:Bphyt_0799 transport-associated; PFAM: transport-associated; SMART: transport-associated and nodulation region YP_003604189.1 KEGG: bpy:Bphyt_0801 hypothetical protein YP_003604190.1 PFAM: protein of unknown function DUF81; KEGG: bxe:Bxe_A3878 hypothetical protein YP_003604191.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_A3877 LysE family amino acid efflux protein YP_003604192.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_0805 transcriptional regulator, LysR family YP_003604193.1 PFAM: pyruvate carboxyltransferase; KEGG: bpy:Bphyt_0806 pyruvate carboxyltransferase YP_003604194.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpy:Bphyt_0807 L-carnitine dehydratase/bile acid-inducible protein F YP_003604195.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0808 major facilitator superfamily MFS_1 YP_003604196.1 KEGG: bxe:Bxe_A3871 hypothetical protein YP_003604197.1 KEGG: bxe:Bxe_A3868 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003604198.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bxe:Bxe_A3867 mannose-1-phosphate guanylyltransferase (GDP); PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase YP_003604199.1 KEGG: bpy:Bphyt_0818 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003604200.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bpy:Bphyt_0819 polysaccharide export protein YP_003604201.1 TIGRFAM: capsular exopolysaccharide family; KEGG: bxe:Bxe_A3864 exopolysaccharide export associated tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein YP_003604202.1 KEGG: bpy:Bphyt_0834 hypothetical protein YP_003604203.1 KEGG: bxe:Bxe_A3844 hypothetical protein YP_003604204.1 KEGG: bpy:Bphyt_0836 hypothetical protein YP_003604205.1 KEGG: bpy:Bphyt_0863 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SMART: chaperonin Cpn10 YP_003604206.1 KEGG: bpy:Bphyt_0864 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_003604207.1 TIGRFAM: adenylylsulfate kinase; KEGG: bph:Bphy_2332 adenylyl-sulfate kinase; PFAM: adenylylsulfate kinase YP_003604208.1 KEGG: rpc:RPC_4223 hypothetical protein YP_003604209.1 PFAM: phosphomethylpyrimidine kinase type-1; KEGG: bxe:Bxe_A3814 hydroxymethylpyrimidine kinase YP_003604210.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bpy:Bphyt_0866 rubredoxin-type Fe(Cys)4 protein YP_003604211.1 KEGG: bxe:Bxe_A3812 hypothetical protein YP_003604212.1 PFAM: protein of unknown function DUF179; KEGG: bpy:Bphyt_0868 hypothetical protein YP_003604213.1 KEGG: bpy:Bphyt_0869 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_003604214.1 KEGG: bpy:Bphyt_0870 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003604215.1 KEGG: bpy:Bphyt_0871 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003604216.1 KEGG: bxe:Bxe_A3807 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_003604217.1 KEGG: bpy:Bphyt_0875 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003604218.1 TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: bxe:Bxe_A3805 diadenosine tetraphosphatase; PFAM: metallophosphoesterase YP_003604219.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_A3804 UDP-glucose 4-epimerase YP_003604220.1 KEGG: bmj:BMULJ_00641 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_003604221.1 KEGG: bpy:Bphyt_0879 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase YP_003604222.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: bcm:Bcenmc03_0844 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003604223.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: bpy:Bphyt_0881 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_003604224.1 KEGG: pol:Bpro_4942 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase YP_003604225.1 PFAM: ABC transporter; KEGG: ddc:Dd586_0654 ABC transporter YP_003604226.1 KEGG: ddc:Dd586_0655 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003604227.1 KEGG: ddc:Dd586_0656 hypothetical protein YP_003604228.1 PFAM: polysaccharide deacetylase; KEGG: ddc:Dd586_0657 hypothetical protein YP_003604229.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ddc:Dd586_0658 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003604230.1 PFAM: glycosyl transferase group 1; KEGG: ddc:Dd586_0659 glycosyl transferase group 1 YP_003604231.1 PFAM: glycosyl transferase group 1; KEGG: azo:azo3584 glycosyltransferase YP_003604232.1 PFAM: UbiA prenyltransferase; KEGG: bxe:Bxe_A3784 hypothetical protein YP_003604233.1 PFAM: FAD linked oxidase domain protein; KEGG: bpy:Bphyt_0897 FAD linked oxidase domain protein YP_003604234.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_0896 short chain dehydrogenase YP_003604235.1 KEGG: bph:Bphy_2274 hypothetical protein YP_003604236.1 KEGG: cag:Cagg_2115 hypothetical protein YP_003604237.1 KEGG: bpy:Bphyt_0889 hypothetical protein YP_003604238.1 PFAM: methyltransferase type 12; KEGG: bxe:Bxe_A3033 hypothetical protein YP_003604239.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: cbk:CLL_A3334 sorbitol dehydrogenase YP_003604240.1 KEGG: cyp:PCC8801_2037 hypothetical protein YP_003604241.1 KEGG: ddc:Dd586_0664 mannosyltransferase B YP_003604242.1 PFAM: glycosyl transferase group 1; KEGG: ddc:Dd586_0666 hypothetical protein YP_003604243.1 PFAM: phosphoglycerate mutase; KEGG: ddc:Dd586_0665 phosphoglycerate mutase YP_003604244.1 KEGG: rpc:RPC_4191 hypothetical protein YP_003604245.1 PFAM: glycosyl transferase group 1; KEGG: ara:Arad_4841 glycosyltransferase protein YP_003604246.1 PFAM: glycosyl transferase group 1; KEGG: ddc:Dd586_0663 glycosyl transferase group 1 YP_003604247.1 PFAM: glycosyl transferase family 2; KEGG: bph:Bphy_2296 glycosyl transferase family protein YP_003604248.1 PFAM: glycosyl transferase group 1; KEGG: rpc:RPC_4200 glycosyl transferase, group 1 YP_003604249.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_0900 NAD-dependent epimerase/dehydratase YP_003604250.1 PFAM: glycosyl transferase, family 4, conserved region; KEGG: bph:Bphy_2290 glycosyl transferase family protein YP_003604251.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: bpy:Bphyt_0902 polysaccharide biosynthesis protein CapD YP_003604252.1 KEGG: ypy:YPK_1247 hypothetical protein YP_003604253.1 KEGG: bgl:bglu_1g22450 hypothetical protein YP_003604254.1 KEGG: bgl:bglu_1g22450 hypothetical protein YP_003604255.1 KEGG: bgl:bglu_1g22450 hypothetical protein YP_003604257.1 KEGG: rpf:Rpic12D_3261 periplasmic protein YP_003604258.1 PFAM: glycosyl transferase, family 4, conserved region; KEGG: bpy:Bphyt_0903 glycosyl transferase family 4 YP_003604259.1 KEGG: bpy:Bphyt_0904 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003604260.1 KEGG: cai:Caci_5583 hypothetical protein YP_003604261.1 KEGG: bpy:Bphyt_0916 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003604262.1 PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3704 glycosyl transferase YP_003604263.1 PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A3703 glycosyl transferase YP_003604264.1 PFAM: polysaccharide biosynthesis protein; KEGG: bpy:Bphyt_0919 polysaccharide biosynthesis protein YP_003604265.1 KEGG: bxe:Bxe_A3701 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_003604266.1 KEGG: bxe:Bxe_A3700 lipopolysaccharide heptosyltransferase-1; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9 YP_003604267.1 KEGG: bxe:Bxe_A3699 hypothetical protein YP_003604268.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; glycosyl transferase group 1; KEGG: bxe:Bxe_A3698 3-deoxy-D-manno-octulosonic-acid transferase YP_003604269.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: plu:plu0253 hypothetical protein YP_003604270.1 KEGG: bxe:Bxe_A3697 urease accessory protein UreG; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K YP_003604271.1 PFAM: urease accessory protein UreF; KEGG: bpy:Bphyt_0926 urease accessory protein UreF YP_003604272.1 PFAM: urease accessory protein UreE; KEGG: bxe:Bxe_A3695 urease accessory protein UreE YP_003604273.1 TIGRFAM: urease, alpha subunit; KEGG: bpy:Bphyt_0928 urease subunit alpha; PFAM: amidohydrolase; urease alpha-subunit domain protein YP_003604274.1 TIGRFAM: urease, beta subunit; KEGG: bpy:Bphyt_0929 urease, beta subunit; PFAM: urease beta subunit YP_003604275.1 TIGRFAM: urease, gamma subunit; KEGG: bmj:BMULJ_00748 urease subunit gamma; PFAM: urease gamma subunit region YP_003604276.1 KEGG: bxe:Bxe_A3691 ABC amino acid transporter, periplasmic ligand binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003604277.1 PFAM: urease accessory protein UreD; KEGG: bph:Bphy_2256 urease accessory protein UreD YP_003604278.1 KEGG: bra:BRADO3946 sensor histidine kinase YP_003604279.1 KEGG: bpy:Bphyt_0266 hypothetical protein YP_003604280.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: bpy:Bphyt_0950 UreA ABC transporter, ATP-binding protein UrtE; SMART: ATPase AAA YP_003604281.1 KEGG: bxe:Bxe_A3686 branched chain amino acid ABC transporter ATPase; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related YP_003604282.1 KEGG: bpy:Bphyt_0952 UreA ABC transporter, permease protein UrtC; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator YP_003604283.1 KEGG: bxe:Bxe_A3684 branched chain amino acid ABC transporter inner membrane protein; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator YP_003604284.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bxe:Bxe_A3683 branched chain amino acid ABC transporter periplasmic ligand-binding protein YP_003604285.1 manually curated; KEGG: vap:Vapar_3994 hypothetical protein YP_003604286.1 KEGG: aav:Aave_2422 hypothetical protein YP_003604287.1 KEGG: bxe:Bxe_A3678 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003604288.1 KEGG: bpy:Bphyt_0960 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_003604289.1 KEGG: bpy:Bphyt_0961 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003604290.1 KEGG: bxe:Bxe_A3675 ABC sugar transporter, ATPase subunit; PFAM: ABC transporter related; SMART: ATPase AAA YP_003604291.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_0963 monosaccharide-transporting ATPase YP_003604292.1 KEGG: bxe:Bxe_A3673 ABC sugar transporter, periplasmic ligand binding protein YP_003604293.1 PFAM: xylose isomerase; AP endonuclease 2 domain protein; KEGG: bpy:Bphyt_0965 xylose isomerase YP_003604294.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A3671 oxidoreductase YP_003604295.1 KEGG: bpy:Bphyt_0967 hypothetical protein YP_003604296.1 KEGG: ppg:PputGB1_3361 methyltransferase type 12 YP_003604297.1 KEGG: bph:Bphy_5558 hypothetical protein YP_003604298.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bph:Bphy_6545 cobyrinic acid ac-diamide synthase YP_003604299.1 PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A3666 branched chain amino acid ABC transporter periplasmic ligand-binding protein YP_003604300.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_0969 transcriptional regulator CysB-like protein YP_003604301.1 KEGG: bpy:Bphyt_0970 ferredoxin--nitrite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_003604302.1 PFAM: conserved hypothetical protein; KEGG: bpy:Bphyt_0971 hypothetical protein YP_003604303.1 TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; KEGG: bpy:Bphyt_0972 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase YP_003604304.1 KEGG: bxe:Bxe_A3661 sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase YP_003604305.1 TIGRFAM: sulfate adenylyltransferase, large subunit; KEGG: bpy:Bphyt_0974 sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_003604306.1 KEGG: bpy:Bphyt_0975 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003604307.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: bxe:Bxe_A3641 hypothetical protein YP_003604308.1 PFAM: permease YjgP/YjgQ family protein; KEGG: bpy:Bphyt_0982 permease YjgP/YjgQ family protein YP_003604309.1 PFAM: permease YjgP/YjgQ family protein; KEGG: bxe:Bxe_A3639 membrane protein, YjgP/YjgQ like YP_003604310.1 KEGG: bpy:Bphyt_0984 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_003604311.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: bpy:Bphyt_0985 DNA polymerase III subunit chi YP_003604312.1 PFAM: Protein of unknown function DUF2486; KEGG: bxe:Bxe_A3636 hypothetical protein YP_003604313.1 PFAM: cytochrome c class I; KEGG: bpy:Bphyt_0987 cytochrome c class I YP_003604314.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: bpy:Bphyt_0988 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003604315.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_0989 transcriptional regulator, LysR family YP_003604316.1 KEGG: bxe:Bxe_A3632 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_003604317.1 PFAM: protein of unknown function DUF541; KEGG: bxe:Bxe_A3631 hypothetical protein YP_003604318.1 PFAM: protein of unknown function DUF55; KEGG: bpy:Bphyt_0992 protein of unknown function DUF55 YP_003604319.1 PFAM: protein of unknown function DUF710; KEGG: bxe:Bxe_A3505 cell division protein ZapA YP_003604320.1 KEGG: bxe:Bxe_A3504 hypothetical protein YP_003604321.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_A3502 outer membrane cobalamin receptor, TonB dependent YP_003604322.1 PFAM: transport system permease protein; KEGG: bpy:Bphyt_0996 transport system permease protein YP_003604323.1 KEGG: bxe:Bxe_A3500 ABC Fe3+-hydroxamate/cobalamin transporter, ATPase subunit; PFAM: ABC transporter related; SMART: ATPase AAA YP_003604324.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: bxe:Bxe_A3499 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003604325.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: bpy:Bphyt_0999 cobalamin synthase YP_003604326.1 KEGG: bxe:Bxe_A3497 phosphoglycerate/bisphosphoglycerate mutase; TIGRFAM: alpha-ribazole phosphatase; PFAM: phosphoglycerate mutase YP_003604327.1 PFAM: periplasmic binding protein; KEGG: bpy:Bphyt_1001 periplasmic binding protein YP_003604328.1 KEGG: bpy:Bphyt_1002 threonine-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II YP_003604329.1 KEGG: bpy:Bphyt_1003 cobalamin biosynthesis protein; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB YP_003604330.1 KEGG: bxe:Bxe_A3493 adenosylcobinamide kinase; PFAM: cobalbumin biosynthesis protein YP_003604331.1 KEGG: bxe:Bxe_A3492 cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; Cobyrinic acid ac-diamide synthase YP_003604332.1 PFAM: thioesterase superfamily protein; KEGG: bpy:Bphyt_1007 thioesterase superfamily protein YP_003604333.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bpy:Bphyt_1008 cobyrinic acid ac-diamide synthase YP_003604334.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: bpy:Bphyt_1009 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase YP_003604335.1 TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; KEGG: bpy:Bphyt_1010 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_003604336.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bpy:Bphyt_1011 chromosome segregation and condensation protein ScpA YP_003604337.1 KEGG: bpy:Bphyt_1012 hypothetical protein YP_003604338.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bxe:Bxe_A3485 hypothetical protein YP_003604339.1 PFAM: protein of unknown function DUF490; KEGG: bxe:Bxe_A3484 hypothetical protein YP_003604340.1 KEGG: bpy:Bphyt_1015 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein YP_003604341.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: bxe:Bxe_A3482 OmpA/MotB family outer membrane protein YP_003604342.1 PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; KEGG: bpy:Bphyt_1017 cobyrinic acid ac-diamide synthase YP_003604343.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: bpy:Bphyt_1018 superoxide dismutase copper/zinc binding YP_003604344.1 TIGRFAM: deoxycytidine triphosphate deaminase; KEGG: bxe:Bxe_A3478 deoxycytidine triphosphate deaminase YP_003604345.1 KEGG: bxe:Bxe_A3477 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_003604346.1 PFAM: protein of unknown function DUF1311; KEGG: bpy:Bphyt_1021 hypothetical protein YP_003604347.1 PFAM: protein of unknown function UPF0187; KEGG: bxe:Bxe_A3475 hypothetical protein YP_003604348.1 TIGRFAM: glucokinase; KEGG: bxe:Bxe_A3454 glucokinase; PFAM: glucokinase; helix-turn-helix protein RpiR; sugar isomerase (SIS) YP_003604349.1 KEGG: bxe:Bxe_A3453 6-phosphogluconolactonase; manually curated; TIGRFAM: 6-phosphogluconolactonase YP_003604350.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: bxe:Bxe_A3452 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003604351.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_1028 extracellular solute-binding protein family 1 YP_003604352.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_1029 binding-protein-dependent transport systems inner membrane component YP_003604353.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_1030 binding-protein-dependent transport systems inner membrane component YP_003604354.1 KEGG: bpy:Bphyt_1031 ABC transporter related; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: ATPase AAA YP_003604355.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1032 transcriptional regulator, LysR family YP_003604356.1 PFAM: glutathione S-transferase domain; KEGG: bpy:Bphyt_1033 glutathione S-transferase domain YP_003604357.1 KEGG: bxe:Bxe_A3443 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_003604358.1 KEGG: bxe:Bxe_A3442 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003604359.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: bpy:Bphyt_1038 cell divisionFtsK/SpoIIIE YP_003604360.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bxe:Bxe_A3440 outer-membrane lipoprotein carrier protein YP_003604361.1 KEGG: bpy:Bphyt_2081 hypothetical protein YP_003604362.1 KEGG: bph:Bphy_4034 hypothetical protein YP_003604363.1 KEGG: bxe:Bxe_A3437 nucleobase/cation symporter, (NCS1) family; TIGRFAM: hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines uracil thiamine allantoin YP_003604364.1 KEGG: bpy:Bphyt_1043 recombination factor protein RarA; PFAM: ATPase AAA; SMART: ATPase AAA YP_003604365.1 TIGRFAM: seryl-tRNA synthetase; KEGG: bxe:Bxe_A3435 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_003604366.1 KEGG: bph:Bphy_3736 hypothetical protein YP_003604367.1 KEGG: bpy:Bphyt_1052 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003604368.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A3426 acetyltransferase YP_003604369.1 KEGG: bxe:Bxe_A3425 septum formation inhibitor; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC YP_003604370.1 KEGG: bxe:Bxe_A3424 septum site-determining protein MinD; TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase YP_003604371.1 KEGG: bpy:Bphyt_1056 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE YP_003604372.1 KEGG: bxe:Bxe_A3422 hypothetical protein YP_003604373.1 KEGG: bpy:Bphyt_1059 chloride channel core; manually curated; PFAM: Cl- channel voltage-gated family protein YP_003604374.1 KEGG: bpy:Bphyt_1060 lipopolysaccharide heptosyltransferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9 YP_003604375.1 KEGG: bpy:Bphyt_1061 hypothetical protein YP_003604376.1 KEGG: bxe:Bxe_A3420 hypothetical protein YP_003604377.1 PFAM: general substrate transporter; KEGG: bpy:Bphyt_1063 major facilitator superfamily MFS_1 YP_003604378.1 KEGG: bxe:Bxe_A3417 TonB protein YP_003604379.1 KEGG: bpy:Bphyt_1065 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_003604380.1 SMART: hypothetical protein; KEGG: bxe:Bxe_A3414 XRE family transcriptional regulator YP_003604381.1 KEGG: bpy:Bphyt_1068 phosphoenolpyruvate carboxylase; PFAM: phosphoenolpyruvate carboxylase YP_003604382.1 PFAM: Porphobilinogen deaminase; manually curated; KEGG: bpy:Bphyt_1069 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase YP_003604383.1 PFAM: protein of unknown function DUF513 hemX; Uroporphyrinogen III synthase HEM4; KEGG: bpy:Bphyt_1070 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase YP_003604384.1 PFAM: HemY domain protein; hypothetical protein; KEGG: bxe:Bxe_A3409 hypothetical protein YP_003604385.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_6383 short-chain dehydrogenase/reductase SDR YP_003604386.1 KEGG: bph:Bphy_5012 sulfate transporter; TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS YP_003604387.1 KEGG: bam:Bamb_5369 hypothetical protein YP_003604388.1 KEGG: bam:Bamb_5367 hypothetical protein YP_003604389.1 KEGG: bac:BamMC406_5469 type VI secretion system Vgr family protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein YP_003604390.1 KEGG: hypothetical protein YP_003604391.1 KEGG: dac:Daci_3861 hypothetical protein YP_003604392.1 KEGG: bac:BamMC406_0134 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003604393.1 KEGG: bcm:Bcenmc03_5158 Fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; PAS fold-4 domain protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_003604394.1 PFAM: 17 kDa surface antigen; KEGG: bpy:Bphyt_4766 17 kDa surface antigen YP_003604395.1 KEGG: bpy:Bphyt_6947 hypothetical protein YP_003604396.1 PFAM: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bja:blr7719 hypothetical protein YP_003604397.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3403 major facilitator superfamily metabolite/H(+) symporter YP_003604398.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_1094 3-ketoacyl-(acyl-carrier-protein) reductase YP_003604399.1 KEGG: bpy:Bphyt_1095 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003604400.1 KEGG: bph:Bphy_2173 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_003604401.1 PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: bxe:Bxe_A3399 hypothetical protein YP_003604402.1 PFAM: excinuclease ABC subunit C; KEGG: bxe:Bxe_A3398 hypothetical protein YP_003604403.1 PFAM: protein of unknown function DUF482; KEGG: bxe:Bxe_A3397 hypothetical protein YP_003604404.1 KEGG: bpy:Bphyt_1117 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003604405.1 PFAM: nitrogen regulatory protein P-II; KEGG: bpy:Bphyt_1118 nitrogen regulatory protein P-II YP_003604406.1 KEGG: bxe:Bxe_A3394 OmpC family outer membrane porin YP_003604407.1 KEGG: bpy:Bphyt_1120 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003604408.1 KEGG: bxe:Bxe_A3392 ABC basic amino acid transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003604409.1 KEGG: bxe:Bxe_A3391 ABC basic amino acid transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003604410.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bph:Bphy_2163 cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein family 3 YP_003604411.1 PFAM: pirin; KEGG: bxe:Bxe_A3389 hypothetical protein YP_003604412.1 KEGG: bxe:Bxe_A3388 hypothetical protein YP_003604413.1 KEGG: bxe:Bxe_A3387 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003604414.1 KEGG: bxe:Bxe_A3386 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003604415.1 KEGG: bxe:Bxe_A3385 hypothetical protein YP_003604416.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_A3384 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003604417.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_1129 binding-protein-dependent transport systems inner membrane component YP_003604418.1 KEGG: bxe:Bxe_A3382 nitrate/sulfonate/bicarbonate ABC transporter ATPase; PFAM: ABC nitrate/sulphonate/bicarbonate family transporter, ATPase subunit; ABC transporter related; SMART: ATPase AAA YP_003604419.1 KEGG: bpy:Bphyt_1131 hypothetical protein YP_003604420.1 KEGG: bpy:Bphyt_1132 hypothetical protein YP_003604421.1 KEGG: bxe:Bxe_A3379 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_003604422.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bxe:Bxe_A3378 hypothetical protein YP_003604423.1 KEGG: bxe:Bxe_A3377 hypothetical protein YP_003604424.1 KEGG: bpy:Bphyt_1136 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_003604425.1 KEGG: bxe:Bxe_A3375 hypothetical protein YP_003604426.1 KEGG: bpy:Bphyt_1138 hypothetical protein YP_003604427.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: bxe:Bxe_A3374 alpha,alpha-trehalose-phosphate synthase(UDP-forming); PFAM: glycosyl transferase family 20 YP_003604428.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_1140 major facilitator superfamily MFS_1 YP_003604429.1 PFAM: PEBP family protein; KEGG: bpy:Bphyt_1141 PEBP family protein YP_003604430.1 KEGG: bxe:Bxe_A3371 T/G mismatch-specific endonuclease; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr YP_003604431.1 KEGG: bpy:Bphyt_1143 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase YP_003604432.1 KEGG: bpy:Bphyt_1144 hypothetical protein YP_003604433.1 PFAM: CsbD family protein; KEGG: bpy:Bphyt_1145 CsbD family protein YP_003604434.1 KEGG: bpy:Bphyt_1146 hypothetical protein YP_003604435.1 PFAM: glutathione S-transferase domain; KEGG: bxe:Bxe_A3350 glutathione S-transferase YP_003604436.1 KEGG: rpt:Rpal_3228 hypothetical protein YP_003604437.1 PFAM: methyltransferase type 11; KEGG: apt:APA01_04690 hypothetical protein YP_003604438.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bpy:Bphyt_1202 rubredoxin-type Fe(Cys)4 protein YP_003604439.1 KEGG: bxe:Bxe_A3341 hypothetical protein YP_003604440.1 KEGG: bpy:Bphyt_1204 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003604441.1 PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein; KEGG: bpy:Bphyt_1205 DNA topoisomerase IV subunit B; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_003604442.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: bxe:Bxe_A3338 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003604443.1 KEGG: bpy:Bphyt_1207 hypothetical protein YP_003604444.1 PFAM: Chromate transporter; KEGG: bpy:Bphyt_1208 chromate transporter YP_003604445.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bpy:Bphyt_1209 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_003604446.1 KEGG: bpy:Bphyt_1211 phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_003604447.1 PFAM: Endoribonuclease L-PSP; KEGG: bxe:Bxe_A3333 hypothetical protein YP_003604448.1 PFAM: aminotransferase class I and II; KEGG: bpy:Bphyt_1213 transcriptional regulator, GntR family YP_003604449.1 KEGG: bxe:Bxe_A3331 hypothetical protein YP_003604450.1 KEGG: bxe:Bxe_A3330 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003604451.1 KEGG: bpy:Bphyt_1216 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003604452.1 KEGG: bpy:Bphyt_1221 chorismate lyase; PFAM: Chorismate lyase YP_003604453.1 KEGG: bcj:BCAL2440 hypothetical protein YP_003604454.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bph:Bphy_3701 GCN5-related N-acetyltransferase YP_003604455.1 PFAM: cupin; KEGG: bph:Bphy_1263 cupin 2 domain-containing protein YP_003604456.1 KEGG: bph:Bphy_1262 AraC family transcriptional regulator; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003604457.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: cti:RALTA_B1630 isocitrate dehydrogenase [NADP] (oxalosuccinate decarboxylase) (IDH); PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type YP_003604458.1 KEGG: bpy:Bphyt_1223 hypothetical protein YP_003604459.1 KEGG: bxe:Bxe_A3322 hypothetical protein YP_003604460.1 PFAM: Na+/solute symporter; KEGG: bxe:Bxe_A3321 Na+/solute symporter YP_003604461.1 KEGG: bxe:Bxe_A3320 hypothetical protein YP_003604462.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A3319 hypothetical protein YP_003604463.1 TIGRFAM: transaldolase; KEGG: bxe:Bxe_A3318 transaldolase B; PFAM: transaldolase YP_003604464.1 KEGG: bpy:Bphyt_1229 benzoate transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein YP_003604465.1 PFAM: von Willebrand factor A; KEGG: bxe:Bxe_A3316 hypothetical protein YP_003604466.1 KEGG: bpy:Bphyt_1231 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003604467.1 PFAM: cytochrome c class I; KEGG: bxe:Bxe_A3314 cytochrome c precursor-related protein YP_003604468.1 PFAM: cytochrome c class I; KEGG: bxe:Bxe_A3313 cytochrome c precursor-related protein YP_003604469.1 PFAM: Domain of unknown function DUF1841; KEGG: bxe:Bxe_A3312 hypothetical protein YP_003604470.1 SMART: HhH-GPD family protein; TIGRFAM: endonuclease III; KEGG: bpy:Bphyt_1235 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_003604471.1 KEGG: bpy:Bphyt_1236 ferredoxin; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003604472.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_1237 transcriptional regulator, TetR family YP_003604473.1 KEGG: bxe:Bxe_A3308 polyhydroxyalkanoate depolymerase; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_003604474.1 PFAM: glycoside hydrolase 15-related; KEGG: bpy:Bphyt_1239 glycoside hydrolase 15-related YP_003604475.1 KEGG: bpy:Bphyt_1240 hypothetical protein YP_003604476.1 KEGG: bxe:Bxe_A3305 hypothetical protein YP_003604477.1 KEGG: bpy:Bphyt_1242 6-phosphogluconolactonase; PFAM: Domain of unknown function DUF2394 YP_003604478.1 KEGG: bpy:Bphyt_1243 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: ATPase AAA YP_003604479.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bxe:Bxe_A3302 hypothetical protein YP_003604480.1 TIGRFAM: phosphoribosylglycinamide formyltransferase 2; KEGG: bpy:Bphyt_1245 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003604481.1 KEGG: bxe:Bxe_A3300 hypothetical protein YP_003604482.1 PFAM: Protein of unknown function DUF2091, periplasmic; KEGG: bxe:Bxe_A3299 hypothetical protein YP_003604483.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: bpy:Bphyt_1248 acetolactate synthase YP_003604484.1 PFAM: Aldehyde Dehydrogenase; KEGG: bpy:Bphyt_1249 aldehyde dehydrogenase YP_003604485.1 KEGG: bpy:Bphyt_1250 DEAD/DEAH box helicase; PFAM: DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase YP_003604486.1 KEGG: bxe:Bxe_A3294 glutamyl-Q tRNA(Asp) synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003604487.1 KEGG: bxe:Bxe_A3293 rhodanese superfamily protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003604488.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bpy:Bphyt_1253 DNA polymerase III subunit alpha; SMART: phosphoesterase PHP domain protein YP_003604489.1 PFAM: glycosyl transferase family 2; KEGG: bpy:Bphyt_1254 glycosyl transferase family 2 YP_003604490.1 TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: bxe:Bxe_A3290 ABC multidrug efflux pump, fused ATPase and inner membrane subunits; SMART: ATPase AAA YP_003604491.1 PFAM: glycosyl transferase family 2; KEGG: dze:Dd1591_2855 glycosyl transferase family 2 YP_003604492.1 PFAM: glycosyl transferase family 2; KEGG: lhk:LHK_02953 glycosyltransferase YP_003604493.1 PFAM: glycosyl transferase group 1; KEGG: rpi:Rpic_2402 glycosyl transferase group 1 YP_003604494.1 PFAM: O-antigen polymerase; KEGG: rpi:Rpic_2401 O-antigen polymerase YP_003604495.1 PFAM: glycosyl transferase family 2; KEGG: bvi:Bcep1808_2398 glycosyl transferase family protein YP_003604496.1 KEGG: bxe:Bxe_A3285 hypothetical protein YP_003604497.1 PFAM: protein of unknown function DUF1486; KEGG: bpy:Bphyt_1261 protein of unknown function DUF1486 YP_003604498.1 PFAM: exonuclease RdgC; KEGG: bpy:Bphyt_1262 recombination associated protein YP_003604499.1 PFAM: FecR protein; KEGG: ppu:PP_3085 transmembrane sensor YP_003604500.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_1271 major facilitator superfamily MFS_1 YP_003604501.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bpy:Bphyt_1272 3-demethylubiquinone-9 3-methyltransferase YP_003604502.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpy:Bphyt_1273 glyoxalase/bleomycin resistance protein/dioxygenase YP_003604503.1 PFAM: NLP/P60 protein; KEGG: bpy:Bphyt_1274 NLP/P60 protein YP_003604504.1 PFAM: TOBE domain protein; KEGG: bpy:Bphyt_1275 TOBE domain protein YP_003604505.1 KEGG: bpy:Bphyt_5054 hypothetical protein YP_003604506.1 KEGG: bxe:Bxe_A3274 sensor protein YP_003604507.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bpy:Bphyt_1280 MscS mechanosensitive ion channel YP_003604508.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcm:Bcenmc03_7069 glyoxalase/bleomycin resistance protein/dioxygenase YP_003604509.1 KEGG: similar to interleukin-16 YP_003604510.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: bxe:Bxe_A3267 ribonuclease G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_003604511.1 KEGG: bpy:Bphyt_1295 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_003604512.1 PFAM: protein of unknown function DUF163; KEGG: bph:Bphy_2069 rRNA large subunit methyltransferase YP_003604513.1 KEGG: bxe:Bxe_A3263 iojap-related protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_003604514.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: bpy:Bphyt_1298 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_003604515.1 KEGG: bpy:Bphyt_1299 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase YP_003604516.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: bpy:Bphyt_1300 phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; phosphoribosylglycinamide synthetase, N-domain; phosphoribosylglycinamide synthetase, C-domain YP_003604517.1 PFAM: protein of unknown function DUF28; KEGG: bpy:Bphyt_1301 hypothetical protein YP_003604518.1 KEGG: bmn:BMA10247_0359 hypothetical protein YP_003604519.1 TIGRFAM: uracil phosphoribosyltransferase; KEGG: bxe:Bxe_A3258 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003604520.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A3257 3-oxoacyl-acyl carrier protein reductase YP_003604521.1 TIGRFAM: methylglyoxal synthase; KEGG: bpy:Bphyt_1304 methylglyoxal synthase; PFAM: MGS domain protein YP_003604522.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_A3255 NADPH-quinone reductase YP_003604523.1 KEGG: bpy:Bphyt_1306 hypothetical protein YP_003604524.1 PFAM: K+transporting ATPase F subunit; KEGG: bac:BamMC406_2205 potassium-transporting ATPase, KdpF subunit-related protein YP_003604525.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: bpy:Bphyt_1308 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit YP_003604526.1 KEGG: bpy:Bphyt_1309 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_003604527.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: bxe:Bxe_A3250 potassium-transporting ATPase subunit C; PFAM: K transporting ATPase KdpC subunit YP_003604528.1 KEGG: bxe:Bxe_A3249 osmosensitive K+ channel signal transduction histidine kinase; PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003604529.1 KEGG: bxe:Bxe_A3248 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003604530.1 PFAM: small multidrug resistance protein; KEGG: bxe:Bxe_A3247 small multidrug efflux pump YP_003604531.1 KEGG: bxe:Bxe_A3246 transmembrane protein YP_003604532.1 PFAM: protein of unknown function DUF214; KEGG: bxe:Bxe_A3245 ABC lysophospholipase exporter, fused inner membrane subunits, FtsX YP_003604533.1 PFAM: globin; KEGG: bxe:Bxe_A3244 oxygen-binding protein, globin-like YP_003604534.1 PFAM: protein of unknown function DUF924; KEGG: bxe:Bxe_A3243 transmembrane protein YP_003604535.1 KEGG: bxe:Bxe_A3242 hypothetical protein YP_003604536.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_1318 glucose-1-dehydrogenase YP_003604537.1 PFAM: conserved hypothetical protein; KEGG: bpy:Bphyt_1319 hypothetical protein YP_003604538.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A3239 TetR family transcriptional regulator YP_003604539.1 PFAM: diacylglycerol kinase; KEGG: bpy:Bphyt_1321 diacylglycerol kinase YP_003604540.1 PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3237 glycosyltransferase YP_003604541.1 PFAM: metallophosphoesterase; KEGG: bpy:Bphyt_1323 metallophosphoesterase YP_003604542.1 PFAM: RDD domain containing protein; KEGG: bpy:Bphyt_1324 RDD domain containing protein YP_003604543.1 KEGG: bpy:Bphyt_1325 transmembrane protein YP_003604544.1 KEGG: bxe:Bxe_A3233 hypothetical protein YP_003604545.1 KEGG: bxe:Bxe_A3232 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2 YP_003604546.1 KEGG: bxe:Bxe_A3231 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding YP_003604547.1 KEGG: bxe:Bxe_A3230 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_003604548.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: bxe:Bxe_A3229 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003604549.1 TIGRFAM: phosphatidylserine decarboxylase related protein; KEGG: bpy:Bphyt_1331 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_003604550.1 TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; KEGG: bpy:Bphyt_1332 CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003604551.1 KEGG: bxe:Bxe_A3225 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_003604552.1 PFAM: sulphate transporter; KEGG: bxe:Bxe_A3224 sulphate transporter YP_003604553.1 KEGG: bpy:Bphyt_1335 carbonate dehydratase; PFAM: carbonic anhydrase YP_003604554.1 KEGG: bxe:Bxe_A3222 lipoprotein YP_003604555.1 KEGG: bpy:Bphyt_1337 ABC branched chain amino acid family transporter, periplasmic ligand binding protein YP_003604556.1 KEGG: bpy:Bphyt_1338 ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_003604557.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: bxe:Bxe_A3218 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_003604558.1 KEGG: bxe:Bxe_A3217 NADPH quinone oxidoreductase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_003604559.1 KEGG: bpy:Bphyt_1341 triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase YP_003604560.1 KEGG: bpy:Bphyt_1342 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_003604561.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: bph:Bphy_2009 NADH dehydrogenase subunit A YP_003604562.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: bpy:Bphyt_1344 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003604563.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; KEGG: bxe:Bxe_A3212 NADH dehydrogenase subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_003604564.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: bxe:Bxe_A3211 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_003604565.1 KEGG: bxe:Bxe_A3210 NADH dehydrogenase subunit E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_003604566.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: bxe:Bxe_A3209 NADH dehydrogenase I (chain F), NuoF; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_003604567.1 KEGG: bxe:Bxe_A3208 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin YP_003604568.1 KEGG: bxe:Bxe_A3207 NADH dehydrogenase subunit H; PFAM: respiratory-chain NADH dehydrogenase subunit 1 YP_003604569.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: bpy:Bphyt_1351 NADH dehydrogenase subunit I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003604570.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: bpy:Bphyt_1352 NADH dehydrogenase subunit J YP_003604571.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: bpy:Bphyt_1353 NADH dehydrogenase subunit K YP_003604572.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: bxe:Bxe_A3203 NADH dehydrogenase subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003604573.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; KEGG: bxe:Bxe_A3202 NADH dehydrogenase subunit M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003604574.1 KEGG: bpy:Bphyt_1356 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003604575.1 KEGG: bpy:Bphyt_1357 hypothetical protein YP_003604576.1 PFAM: NUDIX hydrolase; KEGG: bpy:Bphyt_1358 NUDIX hydrolase YP_003604577.1 KEGG: bpy:Bphyt_1359 hypothetical protein YP_003604578.1 PFAM: Prophage CP4-57 regulatory; KEGG: bpy:Bphyt_1360 phage transcriptional regulator, AlpA YP_003604579.1 PFAM: protein of unknown function DUF1178; KEGG: bpy:Bphyt_1361 protein of unknown function DUF1178 YP_003604580.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_1362 acyl-CoA dehydrogenase domain protein YP_003604581.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A3191 pimeloyl-CoA dehydrogenase (small subunit), PimD-like YP_003604582.1 PFAM: MaoC domain protein dehydratase; KEGG: bpy:Bphyt_1364 MaoC domain protein dehydratase YP_003604583.1 KEGG: bpy:Bphyt_1365 MaoC domain protein dehydratase; PFAM: MaoC domain protein dehydratase YP_003604584.1 PFAM: glutathione S-transferase domain; KEGG: bpy:Bphyt_1366 glutathione S-transferase domain YP_003604585.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A3188 acyl-CoA dehydrogenase oxidoreductase YP_003604586.1 PFAM: aminoglycoside phosphotransferase; KEGG: bxe:Bxe_A3187 tyrosine protein kinase/aminoglycoside phosphotransferase YP_003604587.1 PFAM: phosphoglycerate mutase; KEGG: bpy:Bphyt_1369 phosphoglycerate mutase YP_003604588.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_1370 enoyl-CoA hydratase YP_003604589.1 KEGG: bpy:Bphyt_1371 3-hydroxy-acyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein YP_003604590.1 KEGG: bxe:Bxe_A3183 glutathione S-transferase; PFAM: glutathione S-transferase domain YP_003604591.1 PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_A3182 aminotransferase YP_003604592.1 PFAM: twitching motility protein PilT; KEGG: bxe:Bxe_A3181 hypothetical protein YP_003604593.1 PFAM: protein of unknown function DUF328; KEGG: bpy:Bphyt_1375 hypothetical protein YP_003604594.1 KEGG: bpy:Bphyt_1376 peptidase M14 carboxypeptidase A; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A YP_003604595.1 KEGG: bpy:Bphyt_1377 hypothetical protein YP_003604596.1 KEGG: bxe:Bxe_A3177 hypothetical protein YP_003604597.1 KEGG: bxe:Bxe_A3176 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003604598.1 KEGG: bpy:Bphyt_1380 hypothetical protein YP_003604599.1 PFAM: protein of unknown function UPF0118; KEGG: bpy:Bphyt_1381 protein of unknown function UPF0118 YP_003604601.1 PFAM: IS66 Orf2 family protein; KEGG: bxe:Bxe_A3793 transposase YP_003604602.1 PFAM: integrase family protein; KEGG: reh:PHG140 integrase/recombinase YP_003604603.1 PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: bpy:Bphyt_1385 dTDP-4-dehydrorhamnose reductase YP_003604604.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bxe:Bxe_A3162 heavy metal binding protein YP_003604605.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: bxe:Bxe_A3161 MerR family transcriptional regulator; SMART: regulatory protein MerR YP_003604606.1 KEGG: bpy:Bphyt_1388 hypothetical protein YP_003604607.1 KEGG: bpy:Bphyt_1389 hypothetical protein YP_003604608.1 PFAM: NMT1/THI5 like domain protein; KEGG: bpy:Bphyt_1390 NMT1/THI5 like domain protein YP_003604609.1 PFAM: protein of unknown function DUF519; KEGG: bpy:Bphyt_1391 protein of unknown function DUF519 YP_003604610.1 PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A3157 voltage-gated potassium channel, beta subunit YP_003604611.1 KEGG: bxe:Bxe_A3156 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_003604612.1 PFAM: Patatin; KEGG: bpy:Bphyt_1394 patatin YP_003604613.1 PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_A3154 aromatic amino acid aminotransferase YP_003604614.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: bxe:Bxe_A3153 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase YP_003604615.1 PFAM: ferrous iron transport protein; KEGG: bxe:Bxe_A3152 hypothetical protein YP_003604616.1 KEGG: bpy:Bphyt_1398 hypothetical protein YP_003604617.1 PFAM: iron permease FTR1; KEGG: bxe:Bxe_A3150 oxidase-dependent Fe2+ transporter, (OFeT)family, FTR1-like YP_003604618.1 KEGG: bpy:Bphyt_1400 nitrogen fixation protein VnfA YP_003604619.1 PFAM: Hemin uptake protein hemP; KEGG: bxe:Bxe_A3147 hypothetical protein YP_003604620.1 PFAM: Domain of unknown function DUF1857; KEGG: bpy:Bphyt_1402 domain of unknown function DUF1857 YP_003604621.1 PFAM: OsmC family protein; KEGG: bxe:Bxe_A3145 redox protein regulator of disulfide bond formation, OsmC-like YP_003604622.1 PFAM: pirin; KEGG: bxe:Bxe_A3144 chromosome condensation pirin-like protein YP_003604623.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A3143 LysR family transcriptional regulator YP_003604624.1 KEGG: bpy:Bphyt_1406 hypothetical protein YP_003604625.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bpy:Bphyt_1407 biopolymer transport protein ExbD/TolR YP_003604626.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bpy:Bphyt_1408 MotA/TolQ/ExbB proton channel YP_003604627.1 TIGRFAM: TonB family protein; KEGG: bxe:Bxe_A3140 TonB protein YP_003604628.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_A3139 bacterioferritin-associated ferredoxin YP_003604629.1 TIGRFAM: glutamate racemase; KEGG: bxe:Bxe_A3138 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003604630.1 KEGG: bxe:Bxe_A3137 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: ferritin Dps family protein YP_003604631.1 KEGG: bpy:Bphyt_1413 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type hydro-lyase tartrate/fumarate alpha region YP_003604632.1 PFAM: conserved hypothetical protein; KEGG: bpy:Bphyt_1414 hypothetical protein YP_003604633.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bph:Bphy_1939 hypothetical protein YP_003604634.1 KEGG: bxe:Bxe_A3113 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003604635.1 TIGRFAM: solute symporter protein; KEGG: bpy:Bphyt_1417 membrane protein YP_003604636.1 KEGG: bpy:Bphyt_1418 Na+/solute symporter; TIGRFAM: sodium symporter protein; PFAM: Na+/solute symporter YP_003604637.1 KEGG: bph:Bphy_6634 hypothetical protein YP_003604638.1 KEGG: tbd:Tbd_2571 periplasmic sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003604639.1 KEGG: bpy:Bphyt_2130 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003604640.1 KEGG: reu:Reut_A1683 monovalent cation/H+ antiporter subunit G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit YP_003604641.1 PFAM: multiple resistance and pH regulation protein F; KEGG: cti:RALTA_A1572 monovalent cation/H+ antiporter subunit F YP_003604642.1 PFAM: cation antiporter; KEGG: reh:H16_A1878 monovalent cation/H+ antiporter subunit E YP_003604643.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: cti:RALTA_A1574 monovalent cation/H+ antiporter subunit D YP_003604644.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: reu:Reut_A1679 monovalent cation/H+ antiporter subunit C YP_003604645.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; Na+/H+ antiporter MnhB subunit-related protein; KEGG: reu:Reut_A1678 monovalent cation/H+ antiporter subunit A YP_003604646.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_1420 major facilitator superfamily MFS_1 YP_003604647.1 PFAM: L-asparaginase II; KEGG: bxe:Bxe_A3025 L-asparaginase II YP_003604648.1 KEGG: bpy:Bphyt_1424 response regulator receiver modulated CheW protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver YP_003604649.1 KEGG: bpy:Bphyt_1425 hypothetical protein YP_003604650.1 KEGG: bxe:Bxe_A3016 TPR/sulfotransferase domain-containing protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat YP_003604651.1 PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A3015 oxidoreductase, MocA YP_003604652.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A3012 short-chain dehydrogenase YP_003604653.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A3011 LysR family transcriptional regulator YP_003604654.1 KEGG: bxe:Bxe_A3003 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003604655.1 KEGG: bpy:Bphyt_1438 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_003604656.1 KEGG: bpy:Bphyt_1458 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003604657.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: bpy:Bphyt_1459 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003604658.1 PFAM: protein of unknown function DUF1328; KEGG: bpy:Bphyt_1463 hypothetical protein YP_003604659.1 PFAM: diacylglycerol kinase; KEGG: bph:Bphy_2029 diacylglycerol kinase YP_003604660.1 PFAM: Cellulose synthase BcsB; KEGG: bcj:BCAL1389 cellulose synthase regulator protein YP_003604661.1 KEGG: bpd:BURPS668_A2231 endo-1,4-D-glucanase; PFAM: glycoside hydrolase family 8 YP_003604662.1 PFAM: cellulose synthase operon C domain protein; hypothetical protein; KEGG: bch:Bcen2424_1381 cellulose synthase domain-containing protein YP_003604663.1 TIGRFAM: cellulose biosynthesis protein BcsE; KEGG: bcj:BCAL1392 hypothetical protein YP_003604664.1 KEGG: bch:Bcen2424_1383 hypothetical protein YP_003604665.1 KEGG: bte:BTH_II0796 cellulose biosynthesis protein, TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cobyrinic acid ac-diamide synthase YP_003604666.1 KEGG: bmj:BMULJ_01320 UDP-forming cellulose synthase; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_003604667.1 TIGRFAM: cellulose synthase operon protein YhjU; KEGG: bte:BTH_II0798 hypothetical protein YP_003604668.1 KEGG: bpl:BURPS1106A_A2138 hypothetical protein YP_003604669.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_A2963 basic amino acid exporter LysE YP_003604670.1 KEGG: bxe:Bxe_A2962 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding YP_003604671.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1518 transcriptional regulator, LysR family YP_003604672.1 TIGRFAM: amidohydrolase; KEGG: bpy:Bphyt_1519 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003604673.1 PFAM: general substrate transporter; KEGG: bpy:Bphyt_1520 general substrate transporter YP_003604674.1 KEGG: reh:H16_A1672 hypothetical protein YP_003604675.1 KEGG: bpy:Bphyt_5439 hypothetical protein YP_003604676.1 KEGG: bac:BamMC406_5940 small integral membrane protein YP_003604677.1 PFAM: cytochrome c oxidase subunit III; KEGG: bam:Bamb_6212 cytochrome c oxidase, subunit III YP_003604678.1 PFAM: cytochrome c oxidase subunit III; KEGG: bac:BamMC406_5938 heme/copper-type cytochrome/quinol oxidase subunit 3-like protein YP_003604679.1 TIGRFAM: cytochrome c oxidase, subunit I; KEGG: bac:BamMC406_5937 cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_003604680.1 PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: bam:Bamb_6209 cytochrome c oxidase, subunit II YP_003604681.1 KEGG: bph:Bphy_6432 hypothetical protein YP_003604682.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2953 major facilitator transporter YP_003604683.1 KEGG: bxe:Bxe_A2952 hypothetical protein YP_003604684.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: bxe:Bxe_A2951 nucleobase/cation symporter, (NCS2) family YP_003604685.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bpy:Bphyt_1526 protein of unknown function DUF899 thioredoxin family protein YP_003604686.1 KEGG: bxe:Bxe_A2950 hypothetical protein YP_003604687.1 PFAM: NmrA family protein; KEGG: bxe:Bxe_A2949 NAD dependent epimerase/dehydratase YP_003604688.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1529 transcriptional regulator, LysR family YP_003604689.1 TIGRFAM: histidine ammonia-lyase; KEGG: bpy:Bphyt_1530 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_003604690.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: bpy:Bphyt_1531 transcriptional regulator, histidine utilization repressor, GntR family; SMART: regulatory protein GntR HTH YP_003604691.1 TIGRFAM: urocanate hydratase; KEGG: bpy:Bphyt_1532 urocanate hydratase; PFAM: Urocanase YP_003604692.1 PFAM: protein of unknown function DUF886; KEGG: bxe:Bxe_A2944 hypothetical protein YP_003604693.1 TIGRFAM: imidazolonepropionase; KEGG: bpy:Bphyt_1534 imidazolonepropionase; PFAM: amidohydrolase YP_003604694.1 KEGG: bxe:Bxe_A2942 N-formimino-L-glutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase YP_003604695.1 KEGG: bxe:Bxe_A2941 N-formylglutamate deformylase; TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase YP_003604696.1 KEGG: ara:Arad_2099 hypothetical protein YP_003604697.1 KEGG: bxe:Bxe_A2940 hypothetical protein YP_003604698.1 PFAM: transglutaminase domain protein; KEGG: bxe:Bxe_A2939 transmembrane protein YP_003604699.1 PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A2938 branched chain amino acid ABC transporter periplasmic ligand-binding protein YP_003604700.1 KEGG: bpy:Bphyt_1540 hypothetical protein YP_003604701.1 TIGRFAM: pyridoxal kinase; KEGG: bpy:Bphyt_1541 pyridoxal kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_003604702.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: bpy:Bphyt_1542 glycogen synthase; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1 YP_003604703.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; KEGG: bxe:Bxe_A2934 glucose-1-phosphate adenylyltransferase; PFAM: nucleotidyl transferase YP_003604704.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A2933 alpha/beta family hydrolase YP_003604705.1 PFAM: O-methyltransferase family 2; KEGG: reu:Reut_B5557 O-methyltransferase family protein YP_003604706.1 KEGG: bph:Bphy_1710 hypothetical protein YP_003604707.1 KEGG: rme:Rmet_1753 hypothetical protein YP_003604708.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bph:Bphy_3336 hypothetical protein YP_003604709.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_3337 LysR family transcriptional regulator YP_003604710.1 KEGG: bph:Bphy_1185 hypothetical protein YP_003604711.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mei:Msip34_2357 short-chain dehydrogenase/reductase SDR YP_003604712.1 KEGG: bpy:Bphyt_1545 luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_003604713.1 KEGG: bpy:Bphyt_1549 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_003604714.1 KEGG: bpy:Bphyt_1552 lipoprotein YP_003604715.1 PFAM: Patatin; KEGG: bpy:Bphyt_1553 patatin YP_003604716.1 KEGG: bpy:Bphyt_1554 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003604717.1 KEGG: bpy:Bphyt_1555 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003604718.1 KEGG: bpy:Bphyt_1556 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003604719.1 KEGG: bxe:Bxe_A2924 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003604720.1 KEGG: bpy:Bphyt_1558 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_003604721.1 TIGRFAM: arginine/ornithine succinyltransferase, alpha subunit; arginine/ornithine succinyltransferase subunit; KEGG: bpy:Bphyt_1559 arginine/ornithine succinyltransferase, alpha subunit; PFAM: arginine N-succinyltransferase beta subunit YP_003604722.1 TIGRFAM: arginine N-succinyltransferase; arginine/ornithine succinyltransferase subunit; KEGG: bpy:Bphyt_1560 arginine N-succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit YP_003604723.1 KEGG: bpy:Bphyt_1561 succinylglutamic semialdehyde dehydrogenase; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003604724.1 TIGRFAM: succinylarginine dihydrolase; KEGG: bpy:Bphyt_1562 succinylarginine dihydrolase; PFAM: Succinylarginine dihydrolase YP_003604725.1 TIGRFAM: succinylglutamate desuccinylase; KEGG: bpy:Bphyt_1563 succinylglutamate desuccinylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase YP_003604726.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bpy:Bphyt_1566 cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein family 3 YP_003604727.1 KEGG: bpy:Bphyt_1568 diguanylate phosphodiesterase; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein YP_003604728.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: bpy:Bphyt_1569 signal transduction protein YP_003604729.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: bpy:Bphyt_1570 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein YP_003604730.1 KEGG: bpy:Bphyt_1571 diguanylate phosphodiesterase; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein YP_003604731.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bxe:Bxe_A2911 peroxiredoxin, bacterioferritin comigratory protein YP_003604732.1 KEGG: bxe:Bxe_A2910 signal peptide transmembrane protein YP_003604733.1 PFAM: acriflavin resistance protein; KEGG: bpy:Bphyt_1575 acriflavin resistance protein YP_003604734.1 PFAM: acriflavin resistance protein; KEGG: bpy:Bphyt_1576 acriflavin resistance protein YP_003604735.1 KEGG: bpy:Bphyt_1577 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003604736.1 KEGG: bxe:Bxe_A2906 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003604737.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_5849 major facilitator transporter YP_003604738.1 KEGG: vap:Vapar_6169 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003604739.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: rlg:Rleg_6856 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein YP_003604740.1 KEGG: pfo:Pfl01_2249 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003604741.1 KEGG: aca:ACP_0448 two component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_003604742.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_6173 alpha/beta hydrolase fold YP_003604743.1 KEGG: bte:BTH_II2253 cytochrome P460 YP_003604744.1 KEGG: bch:Bcen2424_5837 hypothetical protein YP_003604745.1 PFAM: Amidase; KEGG: bac:BamMC406_3449 amidase YP_003604746.1 PFAM: Aldehyde Dehydrogenase; KEGG: vap:Vapar_6271 aldehyde dehydrogenase YP_003604747.1 PFAM: Endoribonuclease L-PSP; KEGG: bpy:Bphyt_1212 endoribonuclease L-PSP YP_003604748.1 KEGG: bxe:Bxe_A2870 camphor resistance protein CrcB; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_003604749.1 PFAM: ammonium transporter; KEGG: bxe:Bxe_A2869 ammonium transporter YP_003604750.1 KEGG: bxe:Bxe_A2867 signal transduction histidine kinases (STHK); PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003604751.1 KEGG: bpy:Bphyt_1603 hypothetical protein YP_003604752.1 PFAM: transcriptional regulator domain protein; KEGG: bbr:BB3701 transcriptional regulator YP_003604753.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bbr:BB3700 hypothetical protein YP_003604754.1 KEGG: bbr:BB3699 hypothetical protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase YP_003604755.1 PFAM: cupin; KEGG: bph:Bphy_6639 cupin 2 domain-containing protein YP_003604756.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bmj:BMULJ_05430 short-chain alcohol dehydrogenase YP_003604757.1 KEGG: bxe:Bxe_A2864 hypothetical protein YP_003604758.1 PFAM: protein of unknown function UPF0074; KEGG: bxe:Bxe_A2863 BadM/Rrf2 family transcriptional regulator YP_003604759.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_A2862 NADH-flavin reductase protein YP_003604760.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bpy:Bphyt_1608 MscS mechanosensitive ion channel YP_003604761.1 PFAM: cysteine dioxygenase type I; KEGG: bpy:Bphyt_1609 cysteine dioxygenase type I YP_003604762.1 KEGG: bxe:Bxe_A2859 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003604763.1 KEGG: bxe:Bxe_A2841 signal peptide transmembrane protein YP_003604764.1 PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: bpy:Bphyt_1612 protein of unknown function DUF893 YccS/YhfK YP_003604765.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; KEGG: bpy:Bphyt_1613 exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit YP_003604766.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; KEGG: bpy:Bphyt_1614 exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase YP_003604767.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: bpy:Bphyt_1615 exodeoxyribonuclease V, alpha subunit; SMART: ATPase AAA YP_003604768.1 KEGG: bxe:Bxe_A2836 transmembrane protein YP_003604769.1 PFAM: Class I peptide chain release factor; KEGG: bxe:Bxe_A2835 peptidyl-tRNA hydrolase domain protein YP_003604770.1 KEGG: bxe:Bxe_A2834 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_003604771.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bpy:Bphyt_1619 antibiotic biosynthesis monooxygenase YP_003604772.1 KEGG: bpy:Bphyt_1620 hypothetical protein YP_003604773.1 KEGG: bpy:Bphyt_1621 signal peptide protein YP_003604774.1 PFAM: protein of unknown function DUF218; KEGG: bpy:Bphyt_1622 protein of unknown function DUF218 YP_003604775.1 KEGG: bxe:Bxe_A2829 hypothetical protein YP_003604776.1 manually curated; KEGG: bpy:Bphyt_1624 hypothetical protein YP_003604777.1 KEGG: bpy:Bphyt_1625 transposase A protein YP_003604779.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1626 transcriptional regulator, LysR family YP_003604780.1 PFAM: aminotransferase class I and II; KEGG: bpy:Bphyt_1627 aspartate aminotransferase YP_003604781.1 KEGG: bpy:Bphyt_1628 segregation and condensation protein B; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_003604782.1 KEGG: bxe:Bxe_A2823 ribosomal large subunit pseudouridine synthase B; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003604783.1 PFAM: protein of unknown function DUF150; KEGG: bxe:Bxe_A2822 hypothetical protein YP_003604784.1 KEGG: bxe:Bxe_A2821 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein YP_003604785.1 KEGG: bxe:Bxe_A2820 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; elongation factor Tu domain 2 protein YP_003604786.1 KEGG: bph:Bphy_1728 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_003604787.1 KEGG: bxe:Bxe_A2818 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B YP_003604788.1 KEGG: bxe:Bxe_A2817 major facilitator superfamily multidrug efflux transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003604789.1 KEGG: bxe:Bxe_A3583 major facilitator superfamily efflux pump membrane fusion protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein YP_003604790.1 KEGG: bpy:Bphyt_1637 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003604791.1 KEGG: bpy:Bphyt_1638 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003604792.1 KEGG: bxe:Bxe_A2813 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein YP_003604793.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: bxe:Bxe_A2812 2-oxoglutarate dehydrogenase E1 component; PFAM: transketolase central region; dehydrogenase E1 component YP_003604794.1 KEGG: bxe:Bxe_A2811 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_003604795.1 KEGG: bxe:Bxe_A2810 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003604796.1 PFAM: AFG1-family ATPase; KEGG: bpy:Bphyt_1643 AFG1-family ATPase YP_003604797.1 KEGG: bxe:Bxe_A2808 transposase protein YP_003604798.1 PFAM: Protein of unknown function DUF2147; KEGG: bxe:Bxe_A2807 signal peptide protein YP_003604799.1 KEGG: bpy:Bphyt_1662 signal peptide protein YP_003604800.1 KEGG: bpy:Bphyt_1663 hypothetical protein YP_003604801.1 KEGG: bxe:Bxe_A2787 hypothetical protein YP_003604802.1 KEGG: bxe:Bxe_A2786 nucleoprotein, Hfg, host factor I like protein; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_003604803.1 KEGG: bxe:Bxe_A2785 hypothetical protein YP_003604804.1 KEGG: bxe:Bxe_A2784 sigma-24 (FecI); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003604805.1 KEGG: bpy:Bphyt_1667 transmembrane anti-sigma factor YP_003604806.1 PFAM: FAD linked oxidase domain protein; KEGG: bxe:Bxe_A2781 flavoprotein subunit p-cresol methylhydroxylase, PchF YP_003604807.1 KEGG: bpy:Bphyt_1670 conserved hypothetical secreted protein YP_003604808.1 KEGG: bpy:Bphyt_1671 signal peptide transmembrane protein YP_003604809.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bpy:Bphyt_1672 AMP-dependent synthetase and ligase YP_003604810.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bpy:Bphyt_1673 acetyl-CoA acetyltransferase YP_003604811.1 PFAM: MaoC domain protein dehydratase; KEGG: bpy:Bphyt_1674 MaoC domain protein dehydratase YP_003604812.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_1675 3-ketoacyl-(acyl-carrier-protein) reductase YP_003604813.1 PFAM: Protein of unknown function DUF1974; acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A2774 acyl-CoA dehydrogenase YP_003604814.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A2773 TetR family transcriptional regulator YP_003604815.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2772 major facilitator transporter YP_003604816.1 PFAM: ribonuclease BN; KEGG: bpy:Bphyt_2352 ribonuclease BN YP_003604817.1 KEGG: cti:RALTA_B1221 hypothetical protein YP_003604818.1 KEGG: bpy:Bphyt_5303 hypothetical protein YP_003604819.1 KEGG: afw:Anae109_3529 hypothetical protein YP_003604820.1 KEGG: bpy:Bphyt_1705 hypothetical protein YP_003604821.1 KEGG: bph:Bphy_4613 hypothetical protein YP_003604822.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: bpy:Bphyt_6158 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_003604823.1 KEGG: bxe:Bxe_C0072 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003604824.1 KEGG: bph:Bphy_5183 hypothetical protein YP_003604825.1 KEGG: bph:Bphy_5866 hypothetical protein YP_003604826.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_B1297 short chain dehydrogenase YP_003604827.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_4204 LysR family transcriptional regulator YP_003604828.1 KEGG: bph:Bphy_4600 hypothetical protein YP_003604829.1 PFAM: YCII-related; KEGG: bpy:Bphyt_4212 DGPFAETKE family protein YP_003604830.1 PFAM: protein of unknown function DUF336; KEGG: msl:Msil_0942 hypothetical protein YP_003604831.1 KEGG: hypothetical protein YP_003604832.1 KEGG: bmj:BMULJ_06108 NAD/FAD-utilizing enzyme YP_003604833.1 KEGG: sde:Sde_3076 hypothetical protein YP_003604834.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bid:Bind_2367 glutathione-dependent formaldehyde-activating GFA YP_003604835.1 KEGG: cak:Caul_1024 hypothetical protein YP_003604836.1 PFAM: protein of unknown function UPF0118; KEGG: bph:Bphy_6456 hypothetical protein YP_003604837.1 KEGG: bph:Bphy_6455 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003604838.1 PFAM: secretion protein HlyD family protein; KEGG: bph:Bphy_6454 secretion protein HlyD family protein YP_003604839.1 KEGG: bph:Bphy_6453 membrane protein YP_003604840.1 PFAM: Ion transport 2 domain protein; KEGG: bph:Bphy_6452 ion transport 2 domain-containing protein YP_003604841.1 KEGG: bph:Bphy_5495 ATPase; PFAM: ATPase AAA; ATPase AAA; Clp domain protein; Clp ATPase-like; SMART: ATPase AAA YP_003604842.1 PFAM: Calcium/calmodulin dependent protein kinase II association-domain protein; KEGG: mms:mma_1068 hypothetical protein YP_003604843.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: bph:Bphy_3520 alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003604844.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; KEGG: bph:Bphy_6361 glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_003604846.1 PFAM: protein of unknown function DUF159; KEGG: bph:Bphy_7577 hypothetical protein YP_003604847.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bph:Bphy_1970 DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein YP_003604848.1 manually curated; KEGG: bph:Bphy_1971 hypothetical protein YP_003604849.1 KEGG: bpy:Bphyt_0215 hypothetical protein YP_003604850.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: scl:sce1821 hypothetical protein YP_003604851.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5523 transcriptional regulator, LysR family YP_003604852.1 PFAM: sodium:dicarboxylate symporter; KEGG: bam:Bamb_5625 sodium:dicarboxylate symporter YP_003604853.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_5521 extracellular solute-binding protein family 1 YP_003604854.1 KEGG: bmj:BMULJ_03534 permease of the major facilitator superfamily; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter YP_003604855.1 PFAM: CoA-binding domain protein; KEGG: bph:Bphy_6013 CoA-binding domain-containing protein YP_003604856.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: abb:ABBFA_000207 glutathione-dependent formaldehyde-activating enzyme family protein YP_003604857.1 PFAM: High potential iron-sulfur protein; KEGG: bcj:BCAM2370 high-potential iron-sulfur protein (HIPIP) YP_003604858.1 KEGG: bcm:Bcenmc03_5154 extracellular solute-binding protein; PFAM: cytochrome c class I; SMART: extracellular solute-binding protein family 3 YP_003604859.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; KEGG: bcj:BCAM2368 quinoprotein ethanol dehydrogenase precursor; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_003604860.1 KEGG: bcm:Bcenmc03_5158 Fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_003604861.1 PFAM: coenzyme PQQ synthesis D; KEGG: bac:BamMC406_5900 coenzyme PQQ synthesis D YP_003604862.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_2637 short chain dehydrogenase YP_003604863.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A3009 LysR family transcriptional regulator YP_003604864.1 KEGG: sus:Acid_3628 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003604865.1 PFAM: cupin; KEGG: hmo:HM1_0326 conserved hypothetical protein, cupin domain protein YP_003604866.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ara:Arad_3720 short-chain dehydrogenase protein YP_003604867.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ara:Arad_3719 3-oxoacyl-(acyl-carrier protein) reductase protein YP_003604868.1 KEGG: ara:Arad_3718 transcriptional regulator protein; manually curated; SMART: hypothetical protein YP_003604869.1 KEGG: app:CAP2UW1_3570 WD-40 repeat protein; PFAM: hypothetical protein; SMART: WD-40 repeat protein YP_003604870.1 KEGG: cyn:Cyan7425_2624 beta-lactamase domain protein YP_003604871.1 SMART: Cold shock protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: bpy:Bphyt_1707 ribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein YP_003604872.1 KEGG: bxe:Bxe_A2539 RNA methyltransferase TrmH, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_003604873.1 KEGG: bac:BamMC406_0114 hypothetical protein YP_003604874.1 KEGG: bac:BamMC406_0114 hypothetical protein YP_003604875.1 KEGG: bac:BamMC406_0114 hypothetical protein YP_003604876.1 KEGG: bgl:bglu_1g27480 hypothetical protein YP_003604877.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: bpy:Bphyt_1709 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase YP_003604878.1 PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2536 first mannosyl transferase,o-antigen biosynthesis YP_003604879.1 KEGG: bpy:Bphyt_1712 HTH-type transcriptional regulator,YgjM-like protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_003604880.1 KEGG: bxe:Bxe_A2531 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003604881.1 SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: bpy:Bphyt_1714 transcriptional regulator, Crp/Fnr family YP_003604882.1 KEGG: bpy:Bphyt_1715 glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich YP_003604883.1 PFAM: Domain of unknown function DUF1839; KEGG: bxe:Bxe_A2528 hypothetical protein YP_003604884.1 KEGG: bxe:Bxe_A2527 hypothetical protein YP_003604885.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A2526 acyl-CoA dehydrogenase YP_003604886.1 PFAM: phosphopantetheine-binding; KEGG: bxe:Bxe_A2525 acyl carrier protein YP_003604887.1 KEGG: bxe:Bxe_A2524 GNAT family acetyltransferase YP_003604888.1 PFAM: polysaccharide biosynthesis protein; KEGG: bxe:Bxe_A2518 polysaccharide exporter, (PST) family YP_003604889.1 KEGG: bxe:Bxe_A2516 alpha/beta superfamily hydrolase YP_003604890.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bxe:Bxe_A2514 mannose-1-phosphate guanylyltransferase (GDP); PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase YP_003604891.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bpy:Bphyt_1723 flavin reductase domain protein FMN-binding YP_003604892.1 KEGG: bxe:Bxe_A2512 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003604893.1 PFAM: oxidoreductase domain protein; KEGG: bxe:Bxe_A2511 oxidoreductase YP_003604894.1 KEGG: bxe:Bxe_A2509 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003604895.1 KEGG: bxe:Bxe_A2508 polar amino acid ABC transporter periplasmic ligand-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_003604896.1 PFAM: dihydroorotate oxidase; manually curated; KEGG: bpy:Bphyt_1730 dihydroorotate dehydrogenase 2; TIGRFAM: dihydroorotate dehydrogenase YP_003604897.1 KEGG: bxe:Bxe_A2506 arginyl-tRNA-protein transferase; PFAM: Arginine-tRNA-protein transferase domain protein YP_003604898.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: bxe:Bxe_A2505 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_003604899.1 PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A2504 ADP-ribose pyrophosphatase, NUDIX hydrolase, NudF YP_003604900.1 PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A2503 hypothetical protein YP_003604901.1 PFAM: small multidrug resistance protein; KEGG: bxe:Bxe_A2502 quaternary ammonium efflux pump, 4 TMS small multidrug resistance (SMR) family, GacE YP_003604902.1 KEGG: bxe:Bxe_A2501 hypothetical protein YP_003604903.1 KEGG: bxe:Bxe_A2500 hypothetical protein YP_003604904.1 KEGG: bxe:Bxe_A2499 hypothetical protein YP_003604905.1 PFAM: protein of unknown function DUF1488; KEGG: bpy:Bphyt_1739 hypothetical protein YP_003604906.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_1740 NAD-dependent epimerase/dehydratase YP_003604907.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_1741 transcriptional regulator, TetR family YP_003604908.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_1742 enoyl-CoA hydratase YP_003604909.1 KEGG: bpy:Bphyt_1743 transmembrane protein YP_003604910.1 TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent; KEGG: bpy:Bphyt_1744 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup YP_003604911.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_1745 binding-protein-dependent transport systems inner membrane component YP_003604912.1 KEGG: bpy:Bphyt_1746 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003604913.1 PFAM: TOBE domain protein; KEGG: bcj:BCAL1622 molybdenum-pterin binding protein II YP_003604914.1 KEGG: bpy:Bphyt_1748 hypothetical protein YP_003604915.1 KEGG: bpy:Bphyt_1749 hypothetical protein YP_003604916.1 KEGG: bxe:Bxe_A2489 hypothetical protein YP_003604917.1 KEGG: bpy:Bphyt_1752 hypothetical protein YP_003604918.1 KEGG: bpy:Bphyt_1755 tRNA-dihydrouridine synthase A; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS YP_003604919.1 KEGG: bxe:Bxe_A2484 glycine-rich protein YP_003604920.1 KEGG: bxe:Bxe_A2480 hypothetical protein YP_003604921.1 KEGG: bpy:Bphyt_1761 cytoplasmic protein YP_003604922.1 PFAM: aldo/keto reductase; KEGG: bxe:Bxe_A2478 oxidoreductase YP_003604923.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bpy:Bphyt_1764 hypothetical protein YP_003604924.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1765 transcriptional regulator, LysR family YP_003604925.1 KEGG: bpy:Bphyt_1766 hypothetical protein YP_003604926.1 KEGG: bxe:Bxe_A2476 ligolipopolysacharide ABC exporter inner membrane subunit NodJ family protein; TIGRFAM: ABC transporter, NodJ family; PFAM: ABC transporter YP_003604927.1 TIGRFAM: nodulation ABC transporter NodI; PFAM: ABC transporter related; KEGG: bpy:Bphyt_1768 nodulation ABC transporter NodI; SMART: ATPase AAA YP_003604928.1 PFAM: UspA domain protein; KEGG: bpy:Bphyt_1769 UspA domain protein YP_003604929.1 KEGG: bpy:Bphyt_1770 transmembrane protein YP_003604930.1 KEGG: bpy:Bphyt_1771 hypothetical protein YP_003604931.1 TIGRFAM: LexA repressor; KEGG: bpy:Bphyt_1772 LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24/S26A/S26B, conserved region YP_003604932.1 KEGG: bxe:Bxe_A2470 ABC sulfate/thiosulfate transporter, periplasmic ligand binding protein, CysP; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003604933.1 KEGG: bxe:Bxe_A2469 ABC sulfate/thiosulfate transporter, inner membrane subunit, CysT; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003604934.1 KEGG: bpy:Bphyt_1775 sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003604935.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; transport-associated OB domain protein; KEGG: bpy:Bphyt_1776 sulfate ABC transporter, ATPase subunit; SMART: ATPase AAA YP_003604936.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1777 transcriptional regulator CysB-like protein YP_003604937.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bph:Bphy_2583 YadA domain-containing protein YP_003604938.1 PFAM: Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bph:Bphy_2583 YadA domain-containing protein YP_003604939.1 KEGG: bxe:Bxe_A2464 L-asparaginase, type II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase YP_003604940.1 KEGG: bxe:Bxe_A2462 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_003604941.1 TIGRFAM: hydroxypyruvate isomerase; KEGG: bpy:Bphyt_1781 hydroxypyruvate isomerase; PFAM: xylose isomerase YP_003604942.1 KEGG: bpy:Bphyt_1782 glyoxylate carboligase; TIGRFAM: glyoxylate carboligase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding YP_003604943.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A2459 LysR family transcriptional regulator YP_003604944.1 KEGG: bxe:Bxe_A2458 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003604945.1 KEGG: bxe:Bxe_A2457 transmembrane transcriptional regulator (anti-sigma factor) YP_003604946.1 KEGG: bte:BTH_I2179 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_003604947.1 KEGG: bpy:Bphyt_1787 primosomal replication protein N, PriB YP_003604948.1 KEGG: bph:Bphy_0913 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_003604949.1 KEGG: bxe:Bxe_A2453 50S ribosomal protein L9P; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_003604950.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: bpy:Bphyt_1790 replicative DNA helicase; SMART: ATPase AAA YP_003604951.1 PFAM: phosphate transport regulator; KEGG: bxe:Bxe_A2396 inorganic phosphate transporter YP_003604952.1 PFAM: phosphate transporter; KEGG: bpy:Bphyt_1792 phosphate transporter YP_003604953.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A2394 short-chain dehydrogenase/reductase SDR YP_003604954.1 PFAM: NLP/P60 protein; KEGG: bxe:Bxe_A2393 transmembrane lipoprotein YP_003604955.1 KEGG: bpy:Bphyt_1795 PhoH family protein; PFAM: PhoH family protein; SMART: nucleotide binding protein PINc YP_003604956.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bpy:Bphyt_1796 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003604957.1 PFAM: polysaccharide deacetylase; KEGG: bpy:Bphyt_1797 polysaccharide deacetylase YP_003604958.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_A2389 NAD-dependent epimerase/dehydratase family protein YP_003604959.1 PFAM: formyl transferase domain protein; KEGG: bpy:Bphyt_1799 formyltransferase YP_003604960.1 PFAM: glycosyl transferase family 2; KEGG: bxe:Bxe_A2387 polymixin resistance glycosyltransferase YP_003604961.1 KEGG: bxe:Bxe_A2386 glutamine-scyllo-inositol transaminase, LPS biosynthesis-related; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_003604962.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bpy:Bphyt_1802 small multidrug resistance transmembrane protein, DMT superfamily YP_003604963.1 PFAM: glycosyl transferase family 39; KEGG: bxe:Bxe_A2384 transmembrane protein YP_003604964.1 PFAM: protein of unknown function DUF498; KEGG: bpy:Bphyt_1804 protein of unknown function DUF498 YP_003604965.1 PFAM: aminotransferase class I and II; KEGG: bpy:Bphyt_1805 aminotransferase AlaT YP_003604966.1 KEGG: bxe:Bxe_A2381 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein YP_003604967.1 TIGRFAM: threonine synthase; KEGG: bpy:Bphyt_1807 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003604968.1 KEGG: bpy:Bphyt_1808 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_003604969.1 KEGG: bpy:Bphyt_1809 molybdopterin converting factor, subunit 1; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_003604970.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: bxe:Bxe_A2377 molybdopterin synthase subunit MoaE YP_003604971.1 PFAM: globin; KEGG: bpy:Bphyt_1811 globin YP_003604972.1 KEGG: bxe:Bxe_A2375 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003604973.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; ATPase AAA; Clp domain protein; Clp ATPase-like; KEGG: bxe:Bxe_A2374 heat-shock protein, chaperone ClpB; SMART: ATPase AAA YP_003604974.1 PFAM: protein of unknown function DUF937; KEGG: bxe:Bxe_A2373 hypothetical protein YP_003604975.1 KEGG: bxe:Bxe_A2372 DNA uptake protein, ComEA-like YP_003604976.1 KEGG: bxe:Bxe_A2369 MATE family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003604977.1 KEGG: bpy:Bphyt_1819 inner membrane protein YP_003604978.1 KEGG: bph:Bphy_0947 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_003604979.1 PFAM: protein of unknown function DUF980; KEGG: bxe:Bxe_A2366 inner membrane protein YP_003604980.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor domain protein; Rho termination factor RNA-binding; KEGG: bpy:Bphyt_1824 transcription termination factor Rho; SMART: Cold shock protein; ATPase AAA YP_003604981.1 KEGG: bpy:Bphyt_1825 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain YP_003604982.1 SMART: ATPase AAA; TIGRFAM: DNA polymerase III, subunits gamma and tau; KEGG: bpy:Bphyt_1826 DNA polymerase III, subunits gamma and tau; PFAM: ATPase AAA YP_003604983.1 PFAM: conserved hypothetical protein; KEGG: bph:Bphy_0952 hypothetical protein YP_003604984.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; KEGG: bxe:Bxe_A2359 recombination protein RecR; SMART: Toprim sub domain protein YP_003604985.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpy:Bphyt_1829 L-carnitine dehydratase/bile acid-inducible protein F YP_003604986.1 PFAM: NMT1/THI5 like domain protein; KEGG: bxe:Bxe_A2357 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_003604987.1 KEGG: bpy:Bphyt_1831 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003604988.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A2355 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_003604989.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bpy:Bphyt_1833 alcohol dehydrogenase zinc-binding domain protein YP_003604990.1 TIGRFAM: stationary-phase survival protein SurE; KEGG: bxe:Bxe_A2353 stationary phase survival protein SurE; PFAM: Survival protein SurE YP_003604991.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: bpy:Bphyt_1835 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_003604992.1 KEGG: bxe:Bxe_A2351 lipoprotein/metalloendopeptidase; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003604993.1 KEGG: bxe:Bxe_A2350 RNA polymerase sigma factor RpoS; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_003604994.1 PFAM: 3'-5' exonuclease, PolB-like; KEGG: bxe:Bxe_A2349 3'-5' exonuclease YP_003604995.1 KEGG: bpy:Bphyt_1839 23S rRNA 5-methyluridine methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase YP_003604996.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: bpy:Bphyt_1840 outer membrane assembly lipoprotein YfiO YP_003604997.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bpy:Bphyt_1841 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein YP_003604998.1 PFAM: protein of unknown function DUF152; KEGG: bpy:Bphyt_1842 protein of unknown function DUF152 YP_003604999.1 KEGG: bpy:Bphyt_1843 poly(R)-hydroxyalkanoic acid synthase, class I; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold YP_003605000.1 KEGG: bxe:Bxe_A2342 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003605001.1 KEGG: bxe:Bxe_A2341 acetyacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003605002.1 KEGG: bxe:Bxe_A2340 polyhydroxyalkanoate synthesis repressor PhaR; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein YP_003605003.1 PFAM: dihydrouridine synthase DuS; KEGG: bpy:Bphyt_1847 dihydrouridine synthase DuS YP_003605004.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: bpy:Bphyt_1848 MiaB-like tRNA modifying enzyme YliG; SMART: Elongator protein 3/MiaB/NifB YP_003605005.1 PFAM: PfkB domain protein; KEGG: bpy:Bphyt_1849 PfkB domain protein YP_003605006.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bpy:Bphyt_1850 beta-ketothiolase YP_003605007.1 KEGG: bpy:Bphyt_1851 hypothetical protein YP_003605008.1 KEGG: bpy:Bphyt_1852 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003605009.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: bpy:Bphyt_1855 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003605010.1 PFAM: cytochrome P450; KEGG: bxe:Bxe_A2330 cytochrome P450 hydroxylase(monooxygenase) YP_003605011.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bxe:Bxe_A2329 Ku-domain-containing protein; SMART: Ku domain protein YP_003605012.1 KEGG: bpy:Bphyt_1858 DNA ligase D; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA primase small subunit YP_003605013.1 KEGG: bxe:Bxe_A2327 hypothetical protein YP_003605014.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1860 transcriptional regulator, LysR family YP_003605015.1 KEGG: bxe:Bxe_A2325 alginate lyase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_003605016.1 KEGG: bxe:Bxe_A2324 hypothetical protein YP_003605017.1 PFAM: conserved hypothetical protein; KEGG: bpy:Bphyt_1863 hypothetical protein YP_003605018.1 KEGG: bpy:Bphyt_1864 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605019.1 PFAM: AsmA family protein; KEGG: bpy:Bphyt_1865 AsmA family protein YP_003605020.1 KEGG: bpy:Bphyt_1866 hypothetical protein YP_003605021.1 KEGG: bpy:Bphyt_1867 hypothetical protein YP_003605022.1 KEGG: bxe:Bxe_A2319 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein YP_003605023.1 KEGG: bxe:Bxe_A2318 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003605024.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A2317 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_003605025.1 KEGG: bxe:Bxe_A2316 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_003605026.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bxe:Bxe_A2315 amino-acid dehydratase YP_003605027.1 TIGRFAM: acetylornithine deacetylase (ArgE); KEGG: bxe:Bxe_A2314 acetylornithine deacetylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003605028.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase; helicase; TRCF domain protein; KEGG: bpy:Bphyt_1874 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase YP_003605029.1 KEGG: bxe:Bxe_A2312 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003605030.1 TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; KEGG: bpy:Bphyt_1876 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003605031.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bxe:Bxe_A2309 alkyl hydroperoxide reductase subunit C YP_003605032.1 KEGG: bpy:Bphyt_1878 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003605033.1 KEGG: bpy:Bphyt_1879 osmolarity response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003605034.1 KEGG: bxe:Bxe_A2306 hypothetical protein YP_003605035.1 PFAM: protein of unknown function DUF1501; KEGG: bpy:Bphyt_1882 protein of unknown function DUF1501 YP_003605036.1 PFAM: Squalene/phytoene synthase; KEGG: bpy:Bphyt_1883 squalene/phytoene synthase YP_003605037.1 KEGG: bxe:Bxe_A2302 hypothetical protein YP_003605038.1 KEGG: bpy:Bphyt_1903 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003605039.1 TIGRFAM: glycerate kinase; KEGG: bpy:Bphyt_1904 glycerate kinase; PFAM: glycerate kinase YP_003605040.1 KEGG: bxe:Bxe_A2296 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type YP_003605041.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: bpy:Bphyt_1906 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP YP_003605042.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA; zinc finger C4 domain protein; Clp ATPase-like; KEGG: bpy:Bphyt_1907 ATP-dependent protease ATP-binding subunit ClpX; SMART: ATPase AAA YP_003605043.1 SMART: peptidase S16 lon domain protein; ATPase AAA; TIGRFAM: ATP-dependent protease La; KEGG: bpy:Bphyt_1908 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA YP_003605044.1 KEGG: bph:Bphy_1014 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003605045.1 PFAM: peptidyl-prolyl cis-trans isomerase; KEGG: bxe:Bxe_A2291 peptidyl-prolyl cis-trans isomerase YP_003605046.1 KEGG: bpy:Bphyt_1911 hypothetical protein YP_003605047.1 manually curated; KEGG: bpy:Bphyt_1912 arylesterase; PFAM: lipolytic protein G-D-S-L family YP_003605048.1 manually curated; PFAM: ABC transporter related; KEGG: bpy:Bphyt_1913 ABC transporter related; SMART: ATPase AAA YP_003605049.1 KEGG: bpy:Bphyt_1914 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_003605050.1 KEGG: bpy:Bphyt_1915 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein YP_003605051.1 KEGG: bpy:Bphyt_1916 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase YP_003605052.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: bpy:Bphyt_1917 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003605053.1 PFAM: peptidyl-prolyl cis-trans isomerase; KEGG: bxe:Bxe_A2280 peptidyl-prolyl cis-trans isomerase YP_003605054.1 PFAM: BolA family protein; KEGG: bxe:Bxe_A2279 stress-induced morphogene BolA-like protein YP_003605055.1 KEGG: bxe:Bxe_A2278 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A YP_003605056.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: bxe:Bxe_A2277 methionine sulfoxide reductase B; PFAM: methionine sulfoxide reductase B YP_003605057.1 PFAM: protein of unknown function UPF0061; KEGG: bpy:Bphyt_1924 hypothetical protein YP_003605058.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A2275 acyl-CoA synthetase YP_003605059.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_1926 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_003605060.1 KEGG: bxe:Bxe_A2273 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003605061.1 SMART: Water Stress and Hypersensitive response domain protein; KEGG: bxe:Bxe_A2272 lipoprotein YP_003605062.1 KEGG: bpy:Bphyt_1929 hypothetical protein YP_003605063.1 KEGG: bpy:Bphyt_1930 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003605064.1 PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A2270 phenylacetic acid degradation-related protein YP_003605065.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bxe:Bxe_A2269 NADP-dependent oxidoreductase YP_003605066.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_1934 hypothetical protein YP_003605067.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bpy:Bphyt_1935 alpha/beta hydrolase fold-3 domain protein YP_003605068.1 PFAM: protein of unknown function DUF833; KEGG: bpy:Bphyt_1936 protein of unknown function DUF833 YP_003605069.1 KEGG: bpy:Bphyt_1937 folate-binding protein YgfZ; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel YP_003605070.1 PFAM: aminodeoxychorismate lyase; KEGG: bxe:Bxe_A2264 hypothetical protein YP_003605071.1 TIGRFAM: thymidylate kinase; KEGG: bpy:Bphyt_1939 thymidylate kinase; PFAM: thymidylate kinase YP_003605072.1 KEGG: bxe:Bxe_A2262 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit YP_003605073.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A2261 phosphinothricin N-acetyltransferase YP_003605074.1 KEGG: bpy:Bphyt_1942 hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_003605075.1 KEGG: bxe:Bxe_A2259 ankyrin repeat-containing signal peptide protein YP_003605076.1 KEGG: bpy:Bphyt_1944 hypothetical protein YP_003605077.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_A2257 small-conductance mechanosensitive ion channel YP_003605078.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: bxe:Bxe_A2256 alpha,alpha-trehalose-phosphate synthase(UDP-forming); PFAM: glycosyl transferase family 20 YP_003605079.1 PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2254 sugar transferase, glycosyltransferase, group 1 YP_003605080.1 KEGG: bxe:Bxe_A2253 lipoprotein YP_003605081.1 KEGG: bpy:Bphyt_1950 transmembrane protein YP_003605082.1 PFAM: PsiF repeat protein; KEGG: bxe:Bxe_A2251 phosphate starvation-inducible protein, PsiF YP_003605083.1 PFAM: YCII-related; KEGG: bpy:Bphyt_1952 YciI-like protein YP_003605084.1 KEGG: bpy:Bphyt_1953 transposase A-like protein YP_003605085.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bpy:Bphyt_1954 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase YP_003605086.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: bxe:Bxe_A2246 undecaprenyl-phosphate galactosephosphotransferase; PFAM: sugar transferase YP_003605087.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bxe:Bxe_A2245 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003605088.1 KEGG: bxe:Bxe_A2244 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003605089.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bxe:Bxe_A2243 polysaccharide (EPS I) exporter YP_003605090.1 SMART: ATPase AAA; TIGRFAM: capsular exopolysaccharide family; KEGG: bxe:Bxe_A2242 protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein YP_003605091.1 PFAM: glycosyl transferase family 2; KEGG: bpy:Bphyt_1960 glycosyl transferase family 2 YP_003605092.1 PFAM: glycosyl transferase group 1; KEGG: bpy:Bphyt_1961 glycosyltransferase group 1, RfaG-like protein YP_003605093.1 KEGG: bxe:Bxe_A2239 transmembrane protein YP_003605094.1 PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A2238 glycosyl transferase, group 1 YP_003605095.1 PFAM: glycosyl transferase group 1; KEGG: bpy:Bphyt_1964 glycosyl transferase group 1 YP_003605096.1 KEGG: bph:Bphy_3590 chemotaxis protein CheA; PFAM: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_003605097.1 PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_B3010 methyl-accepting chemotaxis sensory transducer YP_003605098.1 KEGG: bph:Bphy_3588 hypothetical protein YP_003605099.1 KEGG: bxe:Bxe_B3008 hypothetical protein YP_003605100.1 KEGG: bpy:Bphyt_6982 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003605101.1 KEGG: bxe:Bxe_A2234 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_003605102.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bxe:Bxe_A2233 hypothetical protein YP_003605103.1 PFAM: acyltransferase 3; KEGG: bpy:Bphyt_1967 acyltransferase 3 YP_003605104.1 KEGG: bpy:Bphyt_1968 hypothetical protein YP_003605105.1 PFAM: polysaccharide biosynthesis protein; KEGG: bpy:Bphyt_1969 polysaccharide biosynthesis protein YP_003605106.1 PFAM: glycosyl transferase group 1; KEGG: bpy:Bphyt_1970 glycosyl transferase group 1 YP_003605107.1 KEGG: bgl:bglu_1g27490 hypothetical protein YP_003605108.1 KEGG: bgl:bglu_1g27480 hypothetical protein YP_003605109.1 KEGG: bac:BamMC406_0114 hypothetical protein YP_003605110.1 PFAM: acyltransferase 3; KEGG: bxe:Bxe_A2227 lipopolysaccharide biosynthesis-related membrane protein YP_003605111.1 KEGG: bxe:Bxe_A2226 hypothetical protein YP_003605112.1 KEGG: bxe:Bxe_A2225 UDP-glucose pyrophosphorylase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase YP_003605113.1 TIGRFAM: malate synthase G; KEGG: bxe:Bxe_A2223 malate synthase G; PFAM: Malate synthase family protein YP_003605114.1 PFAM: protein of unknown function DUF336; KEGG: bxe:Bxe_A2222 hypothetical protein YP_003605115.1 PFAM: MOSC domain protein beta barrel domain protein; MOSC domain containing protein; KEGG: bpy:Bphyt_1980 MOSC domain protein beta barrel domain protein YP_003605116.1 KEGG: bpy:Bphyt_1982 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003605117.1 KEGG: bxe:Bxe_A2214 assimilatory nitrite reductase (NAD(P)H) large subunit precursor; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region YP_003605118.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: bpy:Bphyt_1984 nitrite reductase (NAD(P)H), small subunit YP_003605119.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; flavodoxin/nitric oxide synthase; FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bxe:Bxe_A2212 sulfite reductase (NADPH) alpha subunit YP_003605120.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_1986 major facilitator superfamily MFS_1 YP_003605121.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bpd:BURPS668_A2604 hypothetical protein YP_003605122.1 KEGG: bpd:BURPS668_A2602 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003605123.1 KEGG: bpy:Bphyt_2003 hypothetical protein YP_003605124.1 KEGG: bpy:Bphyt_2002 trans-aconitate 2-methyltransferase; PFAM: methyltransferase type 12 YP_003605125.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_2001 transcriptional regulator, LysR family YP_003605126.1 PFAM: glutathione S-transferase domain; KEGG: bxe:Bxe_A2200 glutathione S-transferase-like protein YP_003605127.1 KEGG: bxe:Bxe_A2199 hypothetical protein YP_003605128.1 KEGG: bpy:Bphyt_2012 trans-2-enoyl-CoA reductase; PFAM: short-chain alcohol dehydrogenase YP_003605129.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: bpy:Bphyt_2013 peptidoglycan glycosyltransferase YP_003605130.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2014 major facilitator superfamily MFS_1 YP_003605131.1 KEGG: bxe:Bxe_A2195 hypothetical protein YP_003605132.1 PFAM: cupin; KEGG: bpy:Bphyt_2017 cupin YP_003605133.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bpy:Bphyt_2018 NAD(P)H dehydrogenase (quinone) YP_003605134.1 KEGG: bpy:Bphyt_2033 hypothetical protein YP_003605135.1 KEGG: bcm:Bcenmc03_4225 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver YP_003605136.1 PFAM: NnrUfamily protein; KEGG: bpy:Bphyt_2079 NnrU family protein YP_003605137.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_1615 short-chain dehydrogenase/reductase SDR YP_003605138.1 PFAM: Endoribonuclease L-PSP; KEGG: bac:BamMC406_1636 endoribonuclease L-PSP YP_003605139.1 KEGG: bpy:Bphyt_4344 hypothetical protein YP_003605140.1 PFAM: secretion protein HlyD family protein; KEGG: bpy:Bphyt_2021 secretion protein HlyD family protein YP_003605141.1 KEGG: bph:Bphy_4022 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003605142.1 KEGG: bpy:Bphyt_2019 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003605143.1 KEGG: bpy:Bphyt_2415 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003605145.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_4146 short-chain dehydrogenase/reductase SDR YP_003605146.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bac:BamMC406_1637 LysR family transcriptional regulator YP_003605147.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bmj:BMULJ_01694 2-nitropropane dioxygenase YP_003605148.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_6744 major facilitator superfamily MFS_1 YP_003605149.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_6743 transcriptional regulator, LysR family YP_003605150.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: bph:Bphy_1105 beta-lactamase domain-containing protein YP_003605151.1 KEGG: bph:Bphy_1108 transport-associated; PFAM: transport-associated; SMART: transport-associated and nodulation region YP_003605152.1 PFAM: heat shock protein Hsp20; KEGG: bph:Bphy_1110 heat shock protein HSP20 YP_003605153.1 KEGG: bph:Bphy_1116 periplasmic protein of unknown function, DUF1488; manually curated; PFAM: protein of unknown function DUF1488 YP_003605154.1 PFAM: Ion transport 2 domain protein; KEGG: bph:Bphy_1119 ion transport 2 domain-containing protein YP_003605155.1 KEGG: rpf:Rpic12D_3539 chromate transporter, chromate ion transporter (CHR) family; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter YP_003605156.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bph:Bphy_5816 alcohol dehydrogenase YP_003605157.1 KEGG: bph:Bphy_4195 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003605158.1 PFAM: aminoglycoside phosphotransferase; KEGG: swi:Swit_4355 aminoglycoside phosphotransferase YP_003605159.1 PFAM: aminotransferase class-III; KEGG: sil:SPOA0354 aminotransferase, class III YP_003605160.1 PFAM: major facilitator superfamily MFS_1; KEGG: nar:Saro_2604 major facilitator transporter YP_003605161.1 KEGG: bpy:Bphyt_1995 aldehyde dehydrogenase (NAD(+)); PFAM: Aldehyde Dehydrogenase YP_003605162.1 KEGG: rpf:Rpic12D_4436 BNR repeat-containing glycosyl hydrolase YP_003605163.1 KEGG: bch:Bcen2424_5820 RND efflux transporter YP_003605164.1 PFAM: protein of unknown function DUF1302; KEGG: bcj:BCAM0119 hypothetical protein YP_003605165.1 PFAM: protein of unknown function DUF1329; KEGG: rpf:Rpic12D_4433 protein of unknown function DUF1329 YP_003605166.1 KEGG: bmj:BMULJ_04932 class I cytochrome c YP_003605167.1 PFAM: cytochrome c class I; KEGG: bph:Bphy_3813 cytochrome c class I YP_003605168.1 TIGRFAM: methylamine dehydrogenase light chain; KEGG: bac:BamMC406_4994 amine dehydrogenase; PFAM: methylamine dehydrogenase light chain domain protein YP_003605169.1 KEGG: bph:Bphy_3811 methylamine dehydrogenase accessory protein MauD; TIGRFAM: methylamine dehydrogenase accessory protein MauD; PFAM: Redoxin domain protein YP_003605170.1 PFAM: methylamine utilisation MauE; KEGG: bch:Bcen2424_5061 hypothetical protein YP_003605171.1 KEGG: bam:Bamb_4472 amine dehydrogenase; PFAM: methylamine dehydrogenase heavy subunit YP_003605172.1 KEGG: helicase associated domain-containing protein YP_003605173.1 KEGG: bpy:Bphyt_4636 transcriptional regulator, XRE family; PFAM: hypothetical protein; SMART: hypothetical protein YP_003605174.1 KEGG: bxe:Bxe_B0918 hypothetical protein YP_003605175.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bpy:Bphyt_5668 alcohol dehydrogenase GroES domain protein YP_003605176.1 KEGG: bpy:Bphyt_2078 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase YP_003605177.1 PFAM: integrase family protein; KEGG: bpy:Bphyt_2034 integrase family protein YP_003605178.1 KEGG: bph:Bphy_3998 hypothetical protein YP_003605179.1 KEGG: bpy:Bphyt_2133 hypothetical protein YP_003605180.1 KEGG: bpy:Bphyt_2134 molecular chaperone protein HspA/DnaK YP_003605181.1 KEGG: bpy:Bphyt_2135 chaperone protein, HscA/DnaK YP_003605182.1 KEGG: bpy:Bphyt_2136 hypothetical protein YP_003605183.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_C0011 hypothetical protein YP_003605184.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_5893 LysR family transcriptional regulator YP_003605185.1 KEGG: bpy:Bphyt_5988 D-(-)-3-hydroxybutyrate-oligomer hydrolase; PFAM: D-(-)-3-hydroxybutyrate oligomer hydrolase YP_003605186.1 PFAM: Endoribonuclease L-PSP; KEGG: vap:Vapar_0038 endoribonuclease L-PSP YP_003605187.1 KEGG: reh:H16_A0703 transglycosylase; PFAM: Lytic transglycosylase catalytic; extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003605188.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: bpy:Bphyt_2139 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003605189.1 TIGRFAM: argininosuccinate synthase; KEGG: bph:Bphy_5499 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003605190.1 PFAM: Amidohydrolase 3; KEGG: bxe:Bxe_A2120 cytosine deaminase YP_003605191.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_2140 transcriptional regulator, LysR family YP_003605192.1 TIGRFAM: phosphonoacetaldehyde hydrolase; KEGG: bxe:Bxe_A2117 phosphonoacetaldehyde hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003605193.1 KEGG: bpy:Bphyt_2142 2-aminoethylphosphonate--pyruvate transaminase; TIGRFAM: 2-aminoethylphosphonate/pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V YP_003605194.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_2143 transcriptional regulator, LysR family YP_003605195.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A2114 short-chain dehydrogenase/reductase SDR YP_003605196.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A2107 LysR family transcriptional regulator YP_003605197.1 PFAM: copper resistance protein CopC; KEGG: bpy:Bphyt_2173 copper resistance protein CopC YP_003605198.1 KEGG: bxe:Bxe_A2083 hypothetical protein YP_003605199.1 KEGG: bpy:Bphyt_2175 hypothetical protein YP_003605200.1 KEGG: bxe:Bxe_A2081 TRAP-type uncharacterized transport system, periplasmic component protein YP_003605201.1 PFAM: Fertility inhibition FinO-like; KEGG: bpy:Bphyt_2177 ProQ activator of osmoprotectant transporter ProP YP_003605202.1 KEGG: bpy:Bphyt_2189 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003605203.1 KEGG: bpy:Bphyt_2190 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003605204.1 KEGG: bpy:Bphyt_2194 hopanoid biosynthesis associated protein HpnK; TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein YP_003605205.1 KEGG: bxe:Bxe_A2068 glycosyl transferase family protein; TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2 YP_003605206.1 KEGG: bxe:Bxe_A2067 hypothetical protein YP_003605207.1 KEGG: bpy:Bphyt_2197 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003605208.1 KEGG: bpy:Bphyt_2198 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003605209.1 KEGG: bpy:Bphyt_2199 membrane protein YP_003605211.1 KEGG: bpy:Bphyt_2200 hopanoid biosynthesis associated glycosyl transferase protein HpnI; TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2 YP_003605212.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; KEGG: bpy:Bphyt_2201 hopanoid biosynthesis associated radical SAM protein HpnJ; SMART: Elongator protein 3/MiaB/NifB YP_003605213.1 KEGG: mlu:Mlut_04080 hypothetical protein YP_003605214.1 KEGG: bpy:Bphyt_2202 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003605215.1 PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_A2060 2,5-dioxopentanoate dehydrogenase (NAD+) YP_003605216.1 KEGG: bpy:Bphyt_2204 GCN5-related N-acetyltransferase YP_003605217.1 KEGG: bpy:Bphyt_2205 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter; PFAM: 2-keto-3-deoxygluconate permease YP_003605218.1 KEGG: bpy:Bphyt_2206 5-keto-4-deoxyuronate isomerase; PFAM: 5-keto 4-deoxyuronate isomerase YP_003605219.1 KEGG: bpy:Bphyt_2207 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_003605220.1 manually curated; PFAM: transcriptional regulator IclR ; regulatory protein IclR; KEGG: bpy:Bphyt_2208 transcriptional regulator, IclR family; SMART: regulatory protein IclR YP_003605221.1 KEGG: bpy:Bphyt_2210 lipoprotein YP_003605222.1 KEGG: bpy:Bphyt_2211 signal peptide protein YP_003605223.1 KEGG: bxe:Bxe_A2057 hypothetical protein YP_003605224.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_4009 major facilitator transporter YP_003605225.1 KEGG: bph:Bphy_4013 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain YP_003605226.1 KEGG: bpy:Bphyt_2230 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding YP_003605227.1 KEGG: bxe:Bxe_A2039 threonine dehydratase; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain protein YP_003605228.1 PFAM: virulence factor family protein; KEGG: bpy:Bphyt_2232 virulence factor family protein YP_003605229.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: bxe:Bxe_A2033 transmembrane protein, LpiA-like YP_003605230.1 KEGG: bpy:Bphyt_2235 hypothetical protein YP_003605231.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2236 major facilitator superfamily MFS_1 YP_003605232.1 KEGG: bxe:Bxe_A2030 hypothetical protein YP_003605233.1 PFAM: glycosyl transferase family 2; KEGG: bpy:Bphyt_2238 glycosyl transferase family 2 YP_003605234.1 PFAM: methyltransferase type 12; KEGG: bxe:Bxe_A2028 methyltransferase protein YP_003605235.1 KEGG: bpy:Bphyt_2240 acyl-CoA dehydrogenase-related protein YP_003605236.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; KEGG: bpy:Bphyt_2241 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver YP_003605237.1 KEGG: bxe:Bxe_A2025 hypothetical protein YP_003605238.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_A2024 thioredoxin reductase, TrxB YP_003605239.1 KEGG: bpy:Bphyt_2244 alkylhydroperoxidase like protein, AhpD family; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase YP_003605240.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_2246 transcriptional regulator, LysR family YP_003605241.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2021 major facilitator superfamily multidrug efflux transporter YP_003605242.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_2249 transcriptional regulator, LysR family YP_003605243.1 KEGG: bxe:Bxe_A2011 hypothetical protein YP_003605244.1 PFAM: glycosyl transferase family 2; KEGG: bpy:Bphyt_2252 glycosyl transferase family 2 YP_003605245.1 KEGG: bpy:Bphyt_2253 hypothetical protein YP_003605246.1 KEGG: bpy:Bphyt_2254 metabolite/H+ symporter, major facilitator superfamily (MFS); TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter YP_003605247.1 PFAM: SpoVR family protein; KEGG: bpy:Bphyt_2255 SpoVR family protein YP_003605248.1 PFAM: protein of unknown function DUF444; KEGG: bxe:Bxe_A2006 hypothetical protein YP_003605249.1 KEGG: bxe:Bxe_A2005 serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_003605250.1 KEGG: bpy:Bphyt_2258 hydratase/decarboxylase YP_003605251.1 KEGG: bpy:Bphyt_2259 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003605252.1 KEGG: bph:Bphy_1233 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein YP_003605253.1 KEGG: bpy:Bphyt_2260 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003605254.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_2261 monosaccharide-transporting ATPase YP_003605255.1 KEGG: bpy:Bphyt_2262 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605256.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_2263 periplasmic binding protein/LacI transcriptional regulator YP_003605257.1 KEGG: bpy:Bphyt_2264 magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_003605258.1 KEGG: bxe:Bxe_A1995 hypothetical protein YP_003605259.1 KEGG: bxe:Bxe_A1994 hypothetical protein; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein YP_003605260.1 KEGG: bxe:Bxe_A1993 ATPase P YP_003605261.1 PFAM: Saccharopine dehydrogenase; KEGG: bpy:Bphyt_2268 saccharopine dehydrogenase YP_003605262.1 KEGG: bxe:Bxe_A1991 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003605263.1 PFAM: protein of unknown function DUF1520; KEGG: bpy:Bphyt_2271 hypothetical protein YP_003605264.1 KEGG: bpy:Bphyt_2272 hypothetical protein YP_003605265.1 KEGG: bpy:Bphyt_2273 hypothetical protein YP_003605266.1 PFAM: protein of unknown function UCP033101; KEGG: bxe:Bxe_A1984 transmembrane lipoprotein YP_003605267.1 KEGG: bxe:Bxe_A1983 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003605268.1 KEGG: bpy:Bphyt_2276 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_003605269.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2277 major facilitator superfamily MFS_1 YP_003605270.1 PFAM: PfkB domain protein; KEGG: bpy:Bphyt_2278 PfkB domain protein YP_003605271.1 PFAM: xylose isomerase; KEGG: bpy:Bphyt_2279 xylose isomerase YP_003605272.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A1978 LysR family transcriptional regulator YP_003605273.1 PFAM: Uncharacterised protein family UPF0324; KEGG: bxe:Bxe_A1977 hypothetical protein YP_003605274.1 PFAM: glutathione S-transferase domain; KEGG: bxe:Bxe_A1976 glutathione S-transferase YP_003605275.1 PFAM: Cl- channel voltage-gated family protein; hypothetical protein; KEGG: bpy:Bphyt_2283 voltage-gated ClC-type chloride channel ClcB YP_003605276.1 KEGG: bpy:Bphyt_2284 hypothetical protein YP_003605277.1 KEGG: bxe:Bxe_A1973 hypothetical protein YP_003605278.1 KEGG: bxe:Bxe_A1972 hypothetical protein YP_003605279.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A1971 LysR family transcriptional regulator YP_003605280.1 KEGG: bxe:Bxe_A1970 hypothetical protein YP_003605281.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A1969 TetR family transcriptional regulator YP_003605282.1 KEGG: bxe:Bxe_A1968 multidrug efflux pump, membrane fusion protein CzcB subfamily; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003605283.1 PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_A1967 RND family multidrug efflux protein YP_003605284.1 KEGG: bpy:Bphyt_2294 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003605285.1 KEGG: bxe:Bxe_A1961 penicillin-binding (peptidoglycan synthetase) transmembrane protein, MrcA; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003605286.1 KEGG: bxe:Bxe_A1960 hypothetical protein YP_003605287.1 PFAM: PspA/IM30 family protein; KEGG: bpy:Bphyt_2298 phage shock protein A, PspA YP_003605288.1 PFAM: hypothetical protein; KEGG: bxe:Bxe_A1958 hypothetical protein YP_003605289.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_A1957 TetR family transcriptional regulator YP_003605290.1 KEGG: bxe:Bxe_A1956 flavin-binding monooxygenase-like YP_003605291.1 KEGG: bpy:Bphyt_2303 hypothetical protein YP_003605292.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_2306 ornithine carbamoyltransferase YP_003605293.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A1952 ABC polyamine transporter, inner membrane subunit YP_003605294.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; transport-associated OB domain protein; KEGG: bpy:Bphyt_2308 spermidine/putrescine ABC transporter ATPase subunit; SMART: ATPase AAA YP_003605295.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_2309 extracellular solute-binding protein family 1 YP_003605296.1 KEGG: bpy:Bphyt_2310 Mn2+/Fe2+ transporter, NRAMP family; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_003605297.1 PFAM: protein of unknown function DUF1289; KEGG: bxe:Bxe_A1947 hypothetical protein YP_003605298.1 KEGG: dba:Dbac_3076 hypothetical protein YP_003605299.1 KEGG: bxe:Bxe_A1943 ABC transporter, fused ATPase subunits; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605300.1 KEGG: bpy:Bphyt_2316 6-phosphogluconate dehydrogenase NAD-binding; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_003605301.1 PFAM: protein of unknown function DUF1458; KEGG: bxe:Bxe_A1942 hypothetical protein YP_003605302.1 PFAM: basic membrane lipoprotein; KEGG: bxe:Bxe_A1941 ABC transporter, periplasmic ligand binding protein YP_003605303.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1940 ABC transporter, inner membrane subunit YP_003605304.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_2320 inner-membrane translocator YP_003605305.1 KEGG: bxe:Bxe_A1938 ABC transporter, fused ATPase subunits; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605306.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A1937 LysR family transcriptional regulator YP_003605307.1 PFAM: amidohydrolase; KEGG: bpy:Bphyt_2323 hydroxydechloroatrazine ethylaminohydrolase YP_003605308.1 KEGG: bpy:Bphyt_2324 hydroxyisourate hydrolase; TIGRFAM: hydroxyisourate hydrolase; PFAM: transthyretin YP_003605309.1 PFAM: protein of unknown function DUF989; KEGG: bxe:Bxe_A1932 hypothetical protein YP_003605310.1 KEGG: bxe:Bxe_A1931 XRE family transcriptional regulator; PFAM: hypothetical protein; SMART: hypothetical protein YP_003605311.1 KEGG: bxe:Bxe_A1930 hypothetical protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein YP_003605312.1 KEGG: bxe:Bxe_A1929 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase YP_003605313.1 TIGRFAM: allantoicase; KEGG: bxe:Bxe_A1928 allantoicase; PFAM: Allantoicase region YP_003605314.1 KEGG: bxe:Bxe_A1927 hypothetical protein; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase YP_003605315.1 TIGRFAM: urate catabolism protein; KEGG: bpy:Bphyt_2329 urate catabolism protein; PFAM: polysaccharide deacetylase YP_003605316.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bxe:Bxe_A1925 hydantoin racemase YP_003605317.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bxe:Bxe_A1924 NCS1 family nucleobase/cation symporter YP_003605318.1 KEGG: bpy:Bphyt_2332 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003605319.1 KEGG: bxe:Bxe_A1921 L,D-carboxypeptidase A; PFAM: peptidase U61 LD-carboxypeptidase A YP_003605320.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bxe:Bxe_A1920 tRNA-adenosine deaminase YP_003605321.1 PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: bpy:Bphyt_2335 hypothetical protein YP_003605322.1 PFAM: phosphoesterase HXTX; KEGG: bpy:Bphyt_2337 phosphoesterase HXTX YP_003605323.1 KEGG: bpy:Bphyt_2429 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like YP_003605324.1 KEGG: bxe:Bxe_A1707 hypothetical protein YP_003605325.1 SMART: hypothetical protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: bpy:Bphyt_2431 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; hypothetical protein YP_003605326.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bpy:Bphyt_2432 protein of unknown function DUF6 transmembrane YP_003605327.1 PFAM: protein of unknown function UPF0125; KEGG: bpy:Bphyt_2433 protein of unknown function UPF0125 YP_003605328.1 PFAM: cyclase/dehydrase; KEGG: bpy:Bphyt_2434 cyclase/dehydrase YP_003605329.1 KEGG: bpy:Bphyt_2435 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_003605330.1 KEGG: bpy:Bphyt_2436 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein YP_003605331.1 PFAM: protein of unknown function DUF107; KEGG: bxe:Bxe_A1700 hypothetical protein YP_003605332.1 KEGG: bxe:Bxe_A1699 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein YP_003605333.1 PFAM: protein of unknown function DUF299; KEGG: bpy:Bphyt_2439 hypothetical protein YP_003605334.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bxe:Bxe_A1697 RNA methylase YP_003605335.1 KEGG: bxe:Bxe_A1696 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_003605336.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: bxe:Bxe_A1695 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_003605337.1 manually curated; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: bpy:Bphyt_2443 UDP-N-acetylglucosamine acyltransferase YP_003605338.1 KEGG: bxe:Bxe_A1693 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003605339.1 KEGG: bxe:Bxe_A1692 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_003605340.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: bxe:Bxe_A1691 outer membrane protein (OmpH-like) YP_003605341.1 KEGG: bpy:Bphyt_2447 outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein YP_003605342.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: bxe:Bxe_A1689 peptidase RseP; SMART: PDZ/DHR/GLGF domain protein YP_003605343.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: bxe:Bxe_A1688 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003605344.1 PFAM: phosphatidate cytidylyltransferase; KEGG: bxe:Bxe_A1687 phosphatidate cytidylyltransferase YP_003605345.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: bpy:Bphyt_2451 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003605346.1 KEGG: bpy:Bphyt_2452 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_003605347.1 TIGRFAM: uridylate kinase; KEGG: bxe:Bxe_A1684 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003605348.1 KEGG: bxe:Bxe_A1683 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_003605349.1 KEGG: bxe:Bxe_A1682 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_003605350.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: bpy:Bphyt_2456 methionine aminopeptidase; PFAM: peptidase M24 YP_003605351.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: bxe:Bxe_A1679 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein YP_003605352.1 TIGRFAM: peptide deformylase; KEGG: bxe:Bxe_A1677 peptide deformylase; PFAM: formylmethionine deformylase YP_003605353.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: bpy:Bphyt_2461 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; helix-hairpin-helix motif; BRCT domain protein YP_003605354.1 SMART: ZipA FtsZ-binding region; KEGG: bxe:Bxe_A1675 hypothetical protein YP_003605355.1 KEGG: bxe:Bxe_A1674 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein YP_003605356.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bpy:Bphyt_2464 protein of unknown function DUF6 transmembrane YP_003605357.1 KEGG: bpy:Bphyt_2466 succinyldiaminopimelate transaminase; TIGRFAM: succinyldiaminopimelate transaminase; PFAM: aminotransferase class I and II YP_003605358.1 KEGG: bpy:Bphyt_2467 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_003605359.1 PFAM: arsenate reductase and related; KEGG: bxe:Bxe_A1669 hypothetical protein YP_003605360.1 KEGG: bpy:Bphyt_2469 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003605361.1 TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; KEGG: bxe:Bxe_A1667 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; PFAM: methyltransferase small YP_003605362.1 KEGG: bpy:Bphyt_2471 cardiolipin synthetase; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase YP_003605363.1 KEGG: bpy:Bphyt_2472 glutathione peroxidase; PFAM: glutathione peroxidase YP_003605364.1 KEGG: bpy:Bphyt_2473 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605365.1 KEGG: bpy:Bphyt_2474 L-carnitine dehydratase/bile acid-inducible protein F; manually curated; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_003605366.1 KEGG: bpy:Bphyt_2475 hypothetical protein YP_003605367.1 KEGG: bpy:Bphyt_2476 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase AAA YP_003605368.1 TIGRFAM: alanine racemase; KEGG: bpy:Bphyt_2477 alanine racemase; PFAM: alanine racemase domain protein YP_003605369.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1659 lysophospholipid transporter LplT YP_003605370.1 KEGG: bpy:Bphyt_2479 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_003605371.1 KEGG: bpy:Bphyt_2480 domain of unknown function DUF1853; manually curated; PFAM: Domain of unknown function DUF1853 YP_003605372.1 KEGG: bxe:Bxe_A1656 phage SPO1 DNA polymerase-related protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily YP_003605373.1 KEGG: bpy:Bphyt_2482 ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003605374.1 KEGG: bpy:Bphyt_2483 peptidase M22 glycoprotease; manually curated; PFAM: peptidase M22 glycoprotease YP_003605375.1 PFAM: acyl-coA-binding protein ACBP; KEGG: bxe:Bxe_A1653 acyl-CoA-binding protein YP_003605376.1 KEGG: bpy:Bphyt_2485 DEAD/DEAH box helicase; PFAM: DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase YP_003605377.1 KEGG: bpy:Bphyt_2486 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_003605378.1 PFAM: UspA domain protein; KEGG: bxe:Bxe_A1650 universal stress protein YP_003605379.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A1649 LysR family transcriptional regulator YP_003605380.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); KEGG: bxe:Bxe_A1648 HAD family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003605381.1 TIGRFAM: malate synthase A; KEGG: bpy:Bphyt_2490 malate synthase; PFAM: Malate synthase family protein YP_003605382.1 PFAM: AIG2 family protein; KEGG: bxe:Bxe_A1646 hypothetical protein YP_003605383.1 KEGG: bpy:Bphyt_2493 transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003605384.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpy:Bphyt_2494 GCN5-related N-acetyltransferase YP_003605385.1 KEGG: bpy:Bphyt_2495 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_003605386.1 PFAM: Patatin; KEGG: bxe:Bxe_A1641 exported phospholipase YP_003605387.1 PFAM: NLP/P60 protein; KEGG: bpy:Bphyt_2497 NLP/P60 protein YP_003605388.1 KEGG: bxe:Bxe_A1639 ABC peptide transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003605389.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_2499 binding-protein-dependent transport systems inner membrane component YP_003605390.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_2500 binding-protein-dependent transport systems inner membrane component YP_003605391.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A1636 ABC peptide transporter, periplasmic ligand binding protein YP_003605392.1 KEGG: bpy:Bphyt_2503 hypothetical protein YP_003605393.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; KEGG: bpy:Bphyt_2506 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003605394.1 manually curated; TIGRFAM: tRNA(Ile)-lysidine synthetase; KEGG: bxe:Bxe_A1629 PP family ATPase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase YP_003605395.1 KEGG: bpy:Bphyt_2508 acetyl-CoA carboxylase carboxyltransferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_003605396.1 KEGG: bpy:Bphyt_2509 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein YP_003605397.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: bpy:Bphyt_2510 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_003605398.1 PFAM: hypothetical protein; hypothetical protein; KEGG: bpy:Bphyt_2511 hypothetical protein YP_003605399.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bpy:Bphyt_2512 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_003605400.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bxe:Bxe_A1623 peptidylprolyl isomerase YP_003605401.1 KEGG: bxe:Bxe_A1622 UDP-2,3-diacylglucosamine hydrolase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase YP_003605402.1 KEGG: bpy:Bphyt_2515 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase YP_003605403.1 KEGG: bxe:Bxe_A1620 RNA methyltransferase TrmH, group 1; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_003605404.1 PFAM: inositol monophosphatase; KEGG: bxe:Bxe_A1619 inositol-1(or 4)-monophosphatase YP_003605405.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2519 lysophospholipid transporter LplT YP_003605406.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: bpy:Bphyt_2520 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_003605407.1 KEGG: bpy:Bphyt_2521 hypothetical protein YP_003605408.1 KEGG: bxe:Bxe_A1615 peptidyl-prolyl cis-transisomerase (rotamase) YP_003605409.1 KEGG: bxe:Bxe_A1614 hypothetical protein; PFAM: cupin; SMART: transcription factor jumonji jmjC domain protein YP_003605410.1 SMART: helicase c2; DEAD-like helicase; KEGG: bxe:Bxe_A1612 ATP-dependent helicase YP_003605411.1 PFAM: protein of unknown function DUF465; KEGG: bpy:Bphyt_2525 protein of unknown function DUF465 YP_003605412.1 KEGG: bxe:Bxe_A1610 lipoprotein YP_003605413.1 KEGG: bpy:Bphyt_2527 RNA binding S1 domain protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_003605414.1 PFAM: K potassium transporter; KEGG: bxe:Bxe_A1608 KUP family K(+) transporter YP_003605415.1 PFAM: phosphoribosyltransferase; KEGG: bxe:Bxe_A1607 nucleotide phosphoribosyltransferase YP_003605416.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: bxe:Bxe_A1606 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_003605417.1 KEGG: bpy:Bphyt_2531 ATP phosphoribosyltransferase regulatory subunit; TIGRFAM: histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S) YP_003605418.1 PFAM: Protein of unknown function DUF2065; KEGG: bxe:Bxe_A1603 hypothetical protein YP_003605419.1 KEGG: bxe:Bxe_A1602 FtsH protease activity modulator HflC; PFAM: band 7 protein; SMART: band 7 protein YP_003605420.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: bxe:Bxe_A1601 FtsH protease activity modulator HflK; SMART: band 7 protein YP_003605421.1 KEGG: bxe:Bxe_A1600 small GTP-binding protein; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003605422.1 KEGG: bpy:Bphyt_2536 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_003605423.1 KEGG: bpy:Bphyt_2537 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_003605424.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; KEGG: bpy:Bphyt_2538 outer membrane assembly lipoprotein YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_003605425.1 PFAM: Protein of unknown function DUF2133; KEGG: bpy:Bphyt_2539 hypothetical protein YP_003605426.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: bpy:Bphyt_2540 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_003605427.1 TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; KEGG: bpy:Bphyt_2541 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein YP_003605428.1 SMART: hypothetical protein; KEGG: bxe:Bxe_A1593 XRE family transcriptional regulator YP_003605429.1 KEGG: bxe:Bxe_A1592 hypothetical protein; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein YP_003605430.1 PFAM: nucleoside diphosphate kinase; KEGG: bxe:Bxe_A1591 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003605431.1 PFAM: protein of unknown function UPF0005; KEGG: bxe:Bxe_A1590 hypothetical protein YP_003605432.1 KEGG: bpy:Bphyt_2546 beta-lactamase domain protein YP_003605433.1 KEGG: bxe:Bxe_A1586 lipoprotein YP_003605434.1 TIGRFAM: dihydrodipicolinate synthase; KEGG: bpy:Bphyt_2548 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003605435.1 KEGG: bpy:Bphyt_2549 hypothetical protein YP_003605436.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: bpy:Bphyt_2550 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003605437.1 PFAM: peptidase M50; KEGG: bxe:Bxe_A1582 peptidase M50 YP_003605438.1 KEGG: bxe:Bxe_A1581 SUA5/YciO/YrdC/YwlC family translation factor; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_003605439.1 KEGG: bpy:Bphyt_2553 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_003605440.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_2554 alpha/beta hydrolase fold YP_003605441.1 PFAM: protein of unknown function DUF455; KEGG: bpy:Bphyt_2555 protein of unknown function DUF455 YP_003605442.1 KEGG: bpy:Bphyt_2556 transferase hexapeptide repeat containing protein YP_003605443.1 PFAM: Hsp33 protein; KEGG: bpy:Bphyt_2557 HSP33 protein YP_003605444.1 KEGG: bxe:Bxe_A1575 lipoprotein YP_003605445.1 PFAM: Septum formation initiator; KEGG: bpy:Bphyt_2559 cell division protein FtsB YP_003605446.1 TIGRFAM: enolase; KEGG: bph:Bphy_1439 phosphopyruvate hydratase; PFAM: Enolase-like YP_003605447.1 KEGG: bxe:Bxe_A1572 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003605448.1 TIGRFAM: CTP synthase; KEGG: bxe:Bxe_A1571 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_003605449.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1570 hydrolase YP_003605450.1 KEGG: bpy:Bphyt_2564 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_003605451.1 PFAM: TatD-related deoxyribonuclease; KEGG: bpy:Bphyt_2565 TatD-related deoxyribonuclease YP_003605452.1 TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: bxe:Bxe_A1567 ABC lipoprotein efflux pump, ATPase subunit; SMART: ATPase AAA YP_003605453.1 KEGG: bpy:Bphyt_2567 lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_003605454.1 KEGG: bpy:Bphyt_2568 hypothetical protein YP_003605455.1 KEGG: bpy:Bphyt_2569 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_003605456.1 manually curated; KEGG: bpm:BURPS1710b_3602 hypothetical protein YP_003605457.1 KEGG: bpy:Bphyt_2571 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_003605458.1 PFAM: 17 kDa surface antigen; KEGG: bxe:Bxe_A1560 hypothetical protein YP_003605459.1 KEGG: bpy:Bphyt_2573 FeS assembly protein IscX; TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528 YP_003605460.1 KEGG: bpy:Bphyt_2574 ferredoxin, 2Fe-2S type, ISC system; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin YP_003605461.1 KEGG: bpy:Bphyt_2575 chaperone protein HscA; TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70 YP_003605462.1 TIGRFAM: co-chaperone Hsc20; PFAM: HSC20 oligomerisation; heat shock protein DnaJ domain protein; KEGG: bxe:Bxe_A1556 co-chaperone HscB; SMART: heat shock protein DnaJ domain protein YP_003605463.1 KEGG: bac:BamMC406_2034 iron-sulfur cluster assembly protein IscA; TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_003605464.1 KEGG: bxe:Bxe_A1554 scaffold protein; TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein YP_003605465.1 TIGRFAM: cysteine desulfurase IscS; KEGG: bxe:Bxe_A1553 cysteine desulfurase; PFAM: aminotransferase class V YP_003605466.1 KEGG: bpy:Bphyt_2580 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_003605467.1 manually curated; PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: bpy:Bphyt_2581 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight YP_003605468.1 KEGG: bpy:Bphyt_2582 hypothetical protein YP_003605469.1 KEGG: bxe:Bxe_A1549 hypothetical protein YP_003605470.1 PFAM: protein of unknown function DUF162; KEGG: bpy:Bphyt_2584 protein of unknown function DUF162 YP_003605471.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bpy:Bphyt_2585 protein of unknown function DUF224 cysteine-rich region domain protein YP_003605472.1 KEGG: bxe:Bxe_A1546 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003605473.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bpy:Bphyt_2587 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_003605474.1 KEGG: bxe:Bxe_A1544 phasin; TIGRFAM: phasin family protein; PFAM: Phasin YP_003605475.1 KEGG: bpy:Bphyt_2589 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; biotin/lipoyl attachment domain-containing protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003605476.1 KEGG: bxe:Bxe_A1542 dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_003605477.1 KEGG: bpy:Bphyt_2591 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: transketolase domain protein YP_003605478.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A1540 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_003605479.1 KEGG: bpy:Bphyt_2593 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003605480.1 KEGG: bxe:Bxe_A1536 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_003605481.1 KEGG: bpy:Bphyt_2597 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_003605482.1 PFAM: Amidohydrolase 3; KEGG: bpy:Bphyt_2598 cytosine deaminase YP_003605483.1 KEGG: bpy:Bphyt_2599 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003605484.1 KEGG: bxe:Bxe_A1526 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_003605485.1 KEGG: bpy:Bphyt_2612 prolyl oligopeptidase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein YP_003605486.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: bxe:Bxe_A1524 nitrogen metabolism transcriptional regulator, NtrC, fis family; SMART: response regulator receiver; ATPase AAA YP_003605487.1 KEGG: bxe:Bxe_A1523 nitrogen regulation, histidine kinase, protein NR(II); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003605488.1 KEGG: bpy:Bphyt_2615 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_003605489.1 KEGG: bpy:Bphyt_2616 rhodanese domain protein YP_003605490.1 PFAM: molybdopterin binding domain; KEGG: bxe:Bxe_A1519 hypothetical protein YP_003605491.1 KEGG: bpy:Bphyt_2618 hypothetical protein YP_003605492.1 PFAM: fatty acid hydroxylase; KEGG: bxe:Bxe_A1517 hypothetical protein YP_003605493.1 KEGG: bxe:Bxe_A1516 hypothetical protein YP_003605494.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bxe:Bxe_A1514 outer membrane protein, autotransporter and adhesin YP_003605495.1 SMART: DEAD-like helicase ; ATPase AAA; helicase; manually curated; TIGRFAM: ATP-dependent helicase HrpA; KEGG: bxe:Bxe_A1513 ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase; protein of unknown function DUF1605 YP_003605496.1 TIGRFAM: amino-acid N-acetyltransferase; KEGG: bxe:Bxe_A1512 N-acetylglutamate synthase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase YP_003605497.1 PFAM: Fe(II) trafficking protein YggX; KEGG: bxe:Bxe_A1511 hypothetical protein YP_003605498.1 PFAM: general substrate transporter; KEGG: bpy:Bphyt_2625 general substrate transporter YP_003605499.1 KEGG: bxe:Bxe_A1508 hypothetical protein; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase YP_003605500.1 KEGG: bpy:Bphyt_2627 hypothetical protein YP_003605501.1 PFAM: protein of unknown function DUF1211; KEGG: bxe:Bxe_A1498 hypothetical protein YP_003605502.1 PFAM: cupin; KEGG: bxe:Bxe_A1497 hypothetical protein YP_003605503.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bxe:Bxe_A1496 mercuric reductase YP_003605504.1 KEGG: bxe:Bxe_A1495 hypothetical protein YP_003605505.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; KEGG: bpy:Bphyt_2632 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS domain containing protein YP_003605506.1 KEGG: bxe:Bxe_A1492 hypothetical protein YP_003605507.1 KEGG: bpy:Bphyt_2638 hypothetical protein YP_003605508.1 KEGG: bxe:Bxe_A1487 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003605509.1 KEGG: bxe:Bxe_A1486 oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_003605510.1 PFAM: protein of unknown function DUF45; KEGG: bpy:Bphyt_2641 protein of unknown function DUF45 YP_003605511.1 KEGG: bpy:Bphyt_2647 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003605512.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_2648 extracellular solute-binding protein family 1 YP_003605513.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_2649 binding-protein-dependent transport systems inner membrane component YP_003605514.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_2650 binding-protein-dependent transport systems inner membrane component YP_003605515.1 KEGG: bpy:Bphyt_2651 ABC transporter related; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: ATPase AAA YP_003605516.1 PFAM: metallophosphoesterase; KEGG: bpy:Bphyt_2652 metallophosphoesterase YP_003605517.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1462 major facilitator transporter YP_003605518.1 manually curated; KEGG: bac:BamMC406_2625 hypothetical protein YP_003605519.1 KEGG: bxe:Bxe_A1461 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003605520.1 KEGG: bxe:Bxe_A1460 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003605521.1 PFAM: ferritin Dps family protein; KEGG: bmj:BMULJ_01540 bacterioferritin YP_003605522.1 PFAM: protein of unknown function DUF1328; KEGG: bpy:Bphyt_2658 protein of unknown function DUF1328 YP_003605523.1 PFAM: protein of unknown function DUF1328; KEGG: bpy:Bphyt_2659 protein of unknown function DUF1328 YP_003605524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bpy:Bphyt_2660 integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein YP_003605525.1 PFAM: Entericidin EcnAB; KEGG: bpy:Bphyt_2661 entericidin EcnAB YP_003605526.1 KEGG: bpy:Bphyt_2662 lipoprotein YP_003605527.1 KEGG: bpy:Bphyt_2663 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003605528.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A1451 DMT family permease YP_003605529.1 TIGRFAM: hypothetical protein; KEGG: bpy:Bphyt_2665 hypothetical protein YP_003605530.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bpy:Bphyt_2666 oxidoreductase molybdopterin binding YP_003605531.1 KEGG: bpy:Bphyt_2667 transmembrane hydrogenase cytochrome b-type subunit YP_003605532.1 PFAM: protein of unknown function DUF1223; KEGG: bpy:Bphyt_2668 protein of unknown function DUF1223 YP_003605533.1 KEGG: bcj:BCAM0841 hypothetical protein YP_003605534.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bxe:Bxe_A1450 GreA/GreB family elongation factor YP_003605535.1 KEGG: bxe:Bxe_A1449 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_003605536.1 KEGG: bph:Bphy_1519 hypothetical protein YP_003605537.1 KEGG: bxe:Bxe_A1447 hypothetical protein YP_003605538.1 KEGG: bxe:Bxe_A1446 L-lactate/H+ symporter; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_003605539.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bpy:Bphyt_2674 protein of unknown function DUF6 transmembrane YP_003605540.1 KEGG: bxe:Bxe_A1444 exported lipoprotein YP_003605541.1 KEGG: bpy:Bphyt_2677 hypothetical protein YP_003605542.1 KEGG: bpy:Bphyt_2678 hypothetical protein YP_003605543.1 KEGG: bpy:Bphyt_2680 hypothetical protein YP_003605544.1 KEGG: bpy:Bphyt_2681 hypothetical protein YP_003605545.1 KEGG: bxe:Bxe_A1435 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_003605546.1 KEGG: bxe:Bxe_A1432 ABC polar amino acid transporter, periplasmic ligand binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003605547.1 KEGG: bxe:Bxe_A1424 benzoyl-CoA oxygenase, component A; TIGRFAM: benzoyl-CoA oxygenase/reductase, BoxA protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003605548.1 TIGRFAM: benzoyl-CoA oxygenase, B subunit; KEGG: bpy:Bphyt_2695 benzoyl-CoA oxygenase, B subunit YP_003605549.1 KEGG: bpy:Bphyt_2696 benzoyl-CoA-dihydrodiol lyase; TIGRFAM: benzoyl-CoA-dihydrodiol lyase; PFAM: enoyl-CoA hydratase/isomerase YP_003605550.1 KEGG: bxe:Bxe_A1421 anaerobic benzoate catabolism transcriptional regulator; PFAM: shikimate kinase; hypothetical protein; SMART: hypothetical protein YP_003605551.1 KEGG: bpy:Bphyt_2698 hypothetical protein YP_003605552.1 KEGG: bxe:Bxe_A1419 benzoate-coenzyme A ligase; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase YP_003605553.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_2701 alpha/beta hydrolase fold YP_003605554.1 KEGG: bpy:Bphyt_2707 hypothetical protein YP_003605555.1 TIGRFAM: phospholipase C, phosphocholine-specific; KEGG: bpy:Bphyt_2708 phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_003605556.1 KEGG: bxe:Bxe_A1403 hypothetical protein YP_003605557.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bpy:Bphyt_2727 AMP-dependent synthetase and ligase YP_003605558.1 KEGG: bph:Bphy_6719 hypothetical protein YP_003605559.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_2735 transcriptional regulator, LysR family YP_003605560.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_2736 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_003605561.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_2737 acyl-CoA dehydrogenase domain protein YP_003605562.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_2738 acyl-CoA dehydrogenase domain protein YP_003605563.1 KEGG: bps:BPSL2568 hypothetical protein YP_003605564.1 KEGG: bpd:BURPS668_3570 NADH-quinone oxidoreductase, B subunit YP_003605565.1 KEGG: bpy:Bphyt_2749 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_003605566.1 SMART: histone family protein DNA-binding protein; manually curated; TIGRFAM: integration host factor, alpha subunit; KEGG: bxe:Bxe_A1377 integration host factor subunit alpha; PFAM: histone family protein DNA-binding protein YP_003605567.1 KEGG: bxe:Bxe_A1376 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_003605568.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; KEGG: bpy:Bphyt_2752 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003605569.1 KEGG: bpy:Bphyt_2753 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_003605570.1 KEGG: bxe:Bxe_A1373 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35 YP_003605571.1 KEGG: bxe:Bxe_A1372 translation initiation factor 3; TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor 3-like YP_003605572.1 TIGRFAM: threonyl-tRNA synthetase; KEGG: bpy:Bphyt_2756 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain protein; Anticodon-binding domain protein YP_003605573.1 TIGRFAM: RelA/SpoT family protein; KEGG: bpy:Bphyt_2757 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein YP_003605574.1 PFAM: Endoribonuclease L-PSP; KEGG: bph:Bphy_1560 endoribonuclease L-PSP YP_003605575.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1368 hydrolase YP_003605576.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: bxe:Bxe_A1367 butyryl-CoA:acetate CoA transferase; PFAM: coenzyme A transferase YP_003605577.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: bxe:Bxe_A1366 3-oxoacid CoA-transferase; PFAM: coenzyme A transferase YP_003605578.1 TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; KEGG: bxe:Bxe_A1365 LuxR family transcriptional regulator; SMART: regulatory protein LuxR; PAS domain containing protein YP_003605579.1 PFAM: thioesterase superfamily protein; KEGG: bph:Bphy_1565 thioesterase superfamily protein YP_003605580.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_2764 short chain dehydrogenase YP_003605581.1 KEGG: bpy:Bphyt_2765 electron-transferring-flavoprotein dehydrogenase; PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003605582.1 TIGRFAM: chorismate synthase; KEGG: bpy:Bphyt_2767 chorismate synthase; PFAM: chorismate synthase YP_003605583.1 KEGG: bxe:Bxe_A1359 lysophospholipid exporter/2-acylglycerolphosphoethanolamine acyltransferase; PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase YP_003605584.1 KEGG: bxe:Bxe_A1358 hypothetical protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_003605585.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bpy:Bphyt_2770 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003605586.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1356 alpha/beta hydrolase fold protein YP_003605587.1 PFAM: Protein of unknown function DUF2253, membrane; KEGG: bpy:Bphyt_2772 hypothetical protein YP_003605588.1 KEGG: bpy:Bphyt_2773 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_003605589.1 KEGG: bpy:Bphyt_2774 flavoprotein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase YP_003605590.1 PFAM: Protein of unknown function DUF2069, membrane; KEGG: bpy:Bphyt_2775 hypothetical protein YP_003605591.1 PFAM: FAD linked oxidase domain protein; KEGG: bpy:Bphyt_2776 FAD linked oxidase domain protein YP_003605592.1 PFAM: metallophosphoesterase; KEGG: bpy:Bphyt_2777 metallophosphoesterase YP_003605593.1 KEGG: bxe:Bxe_A1348 hypothetical protein YP_003605594.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A1347 LysR family transcriptional regulator YP_003605595.1 KEGG: bpy:Bphyt_2781 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003605596.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bpy:Bphyt_2782 fusaric acid resistance protein conserved region YP_003605597.1 PFAM: protein of unknown function DUF1656; KEGG: bxe:Bxe_A1344 hypothetical protein YP_003605598.1 PFAM: secretion protein HlyD family protein; KEGG: bpy:Bphyt_2784 secretion protein HlyD family protein YP_003605599.1 PFAM: Ankyrin; KEGG: pwa:Pecwa_2436 ankyrin YP_003605600.1 KEGG: esa:ESA_03919 hypothetical protein YP_003605601.1 KEGG: bpy:Bphyt_2793 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003605602.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1340 major facilitator superfamily multidrug (fosmidomycin) efflux transporter YP_003605603.1 KEGG: bac:BamMC406_5374 hypothetical protein YP_003605604.1 KEGG: bgl:bglu_1g11840 hypothetical protein YP_003605605.1 KEGG: bpy:Bphyt_2795 propionyl-CoA synthetase; TIGRFAM: propionate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003605606.1 TIGRFAM: MTA/SAH nucleosidase; KEGG: bpy:Bphyt_2796 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1 YP_003605607.1 KEGG: bxe:Bxe_A1337 ATP-dependent DNA helicase UvrD; manually curated; PFAM: UvrD/REP helicase YP_003605608.1 KEGG: bpy:Bphyt_2799 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_003605609.1 KEGG: bpy:Bphyt_2800 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase YP_003605610.1 PFAM: SirA family protein; KEGG: bpy:Bphyt_2801 SirA family protein YP_003605611.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bpy:Bphyt_2803 oxidoreductase domain protein YP_003605612.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bpy:Bphyt_2804 inositol 2-dehydrogenase YP_003605613.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bpy:Bphyt_2805 transcriptional regulator, RpiR family YP_003605614.1 KEGG: bpy:Bphyt_2806 ABC sugar transporter, periplasmic ligand binding protein YP_003605615.1 PFAM: inner-membrane translocator; KEGG: bph:Bphy_1598 monosaccharide-transporting ATPase YP_003605616.1 KEGG: bxe:Bxe_A1327 ABC sugar transporter, ATPase subunit; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605617.1 PFAM: Protein of unknown function DUF2090; PfkB domain protein; KEGG: bxe:Bxe_A1326 myo-inositol catabolism LolC protein YP_003605618.1 PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bpy:Bphyt_2810 thiamine pyrophosphate protein central region YP_003605619.1 KEGG: bpy:Bphyt_2811 xylose isomerase; PFAM: xylose isomerase YP_003605620.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: bpy:Bphyt_2812 myo-inositol catabolism IolB domain protein YP_003605621.1 KEGG: bpy:Bphyt_2814 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605622.1 KEGG: bxe:Bxe_A1320 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605623.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A1319 branched chain amino acid ABC transporter inner membrane protein YP_003605624.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_2818 inner-membrane translocator YP_003605625.1 PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A1317 4-hydroxybenzoyl-CoA thioesterase YP_003605626.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bxe:Bxe_A1316 iron-containing alcohol dehydrogenase YP_003605627.1 PFAM: NUDIX hydrolase; KEGG: bpy:Bphyt_2820 NUDIX hydrolase YP_003605628.1 KEGG: bpy:Bphyt_2821 threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003605629.1 PFAM: protein of unknown function DUF1228; KEGG: bpy:Bphyt_2822 protein of unknown function DUF1228 YP_003605630.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_2823 transcriptional regulator, LysR family YP_003605631.1 TIGRFAM: alanyl-tRNA synthetase; KEGG: bpy:Bphyt_2824 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_003605632.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpy:Bphyt_2825 L-carnitine dehydratase/bile acid-inducible protein F YP_003605633.1 PFAM: protein of unknown function DUF1234; KEGG: bpy:Bphyt_2826 protein of unknown function DUF1234 YP_003605634.1 TIGRFAM: gamma-glutamyltransferase; KEGG: bxe:Bxe_A1308 gamma-glutamyltransferase 1; PFAM: gamma-glutamyltranspeptidase YP_003605635.1 KEGG: bxe:Bxe_A1307 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain YP_003605636.1 KEGG: bpy:Bphyt_2829 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003605637.1 PFAM: NUDIX hydrolase; KEGG: bpy:Bphyt_2830 NUDIX hydrolase YP_003605638.1 KEGG: bpy:Bphyt_2831 hypothetical protein YP_003605639.1 KEGG: bpy:Bphyt_6518 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer YP_003605640.1 KEGG: bxe:Bxe_A1299 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA YP_003605641.1 PFAM: Aldose 1-epimerase; KEGG: bpy:Bphyt_2838 aldose 1-epimerase YP_003605642.1 KEGG: bpy:Bphyt_2839 peptidase M23; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003605643.1 KEGG: bxe:Bxe_A1295 lipoprotein YP_003605644.1 PFAM: Protein of unknown function DUF2288; KEGG: bph:Bphy_0897 hypothetical protein YP_003605645.1 KEGG: bpy:Bphyt_2844 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003605646.1 KEGG: bpy:Bphyt_2845 conserved hypothetical lipoprotein YP_003605647.1 KEGG: bpy:Bphyt_2846 hypothetical protein YP_003605648.1 KEGG: bpy:Bphyt_2847 hypothetical protein YP_003605649.1 KEGG: bxe:Bxe_A1276 phosphohistidine phosphatase, SixA; TIGRFAM: phosphohistidine phosphatase SixA; PFAM: phosphoglycerate mutase YP_003605650.1 KEGG: bxe:Bxe_A1275 ornithine-acyl[acyl carrier protein] N-acyltransferase YP_003605651.1 KEGG: bpy:Bphyt_2850 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase YP_003605652.1 KEGG: bpy:Bphyt_2851 polyphosphate kinase; PFAM: polyphosphate kinase YP_003605653.1 TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bxe:Bxe_A1272 phosphate sensor signal transduction histidine kinase, PhoR; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003605654.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bpy:Bphyt_2853 two component transcriptional regulator, winged helix family; SMART: response regulator receiver; transcriptional regulator domain protein YP_003605655.1 KEGG: bpy:Bphyt_2854 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_003605656.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bxe:Bxe_A1269 ABC phosphate transporter, ATPase subunit, PstB; SMART: ATPase AAA YP_003605657.1 KEGG: bpy:Bphyt_2856 phosphate transporter permease subunit PtsA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_003605658.1 KEGG: bxe:Bxe_A1267 phosphate transporter permease subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_003605659.1 KEGG: bpy:Bphyt_2858 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003605660.1 TIGRFAM: phosphoglucosamine mutase; KEGG: bpy:Bphyt_2860 phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_003605661.1 TIGRFAM: dihydropteroate synthase; KEGG: bpy:Bphyt_2861 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003605662.1 SMART: ATPase AAA; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: bpy:Bphyt_2862 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular YP_003605663.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bxe:Bxe_A1261 ribosomal RNA large subunit methyltransferase YP_003605664.1 PFAM: protein of unknown function UPF0044; KEGG: bpy:Bphyt_2864 protein of unknown function UPF0044 YP_003605665.1 KEGG: bpy:Bphyt_2865 hypothetical protein YP_003605666.1 manually curated; TIGRFAM: transcription elongation factor GreA; KEGG: bxe:Bxe_A1258 transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein YP_003605667.1 KEGG: bxe:Bxe_A1257 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_003605668.1 KEGG: bpy:Bphyt_2868 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_003605669.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2869 major facilitator superfamily MFS_1 YP_003605670.1 KEGG: bpy:Bphyt_2870 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; MLTD_N domain protein; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003605671.1 KEGG: bpy:Bphyt_2871 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase YP_003605672.1 PFAM: methyltransferase type 11; KEGG: bxe:Bxe_A1252 hypothetical protein YP_003605673.1 PFAM: ribonuclease H; KEGG: bpy:Bphyt_2873 ribonuclease H YP_003605674.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bxe:Bxe_A1250 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III YP_003605675.1 KEGG: GL19403 gene product from transcript GL19403-RA YP_003605676.1 KEGG: bpy:Bphyt_2875 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: ATPase AAA YP_003605677.1 PFAM: Protein of unknown function DUF2214, membrane; KEGG: bpy:Bphyt_2876 hypothetical protein YP_003605678.1 KEGG: bxe:Bxe_A1246 hypothetical protein YP_003605679.1 PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A1245 glycosyl transferase, group 1 YP_003605680.1 KEGG: bpy:Bphyt_2879 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605681.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: bpy:Bphyt_2880 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_003605682.1 TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; KEGG: bxe:Bxe_A1241 trehalose-phosphatase; PFAM: trehalose-phosphatase YP_003605683.1 PFAM: electron transport protein SCO1/SenC; KEGG: bpy:Bphyt_2882 electron transport protein SCO1/SenC YP_003605684.1 PFAM: protein of unknown function DUF461; KEGG: bpy:Bphyt_2883 protein of unknown function DUF461 YP_003605685.1 PFAM: cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: bxe:Bxe_A1238 inner membrane protein YP_003605686.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A1237 GNAT family acetyltransferase YP_003605687.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: bpy:Bphyt_2886 diguanylate cyclase with GAF sensor; SMART: GGDEF domain containing protein; GAF domain protein YP_003605688.1 PFAM: GumN family protein; KEGG: bpy:Bphyt_2887 GumN family protein YP_003605689.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: bpy:Bphyt_2888 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003605690.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC subunit C; excinuclease ABC subunit C; UvrB/UvrC protein; KEGG: bxe:Bxe_A1095 excinuclease ABC subunit C; SMART: excinuclease ABC subunit C; Helix-hairpin-helix DNA-binding class 1 YP_003605691.1 PFAM: Uncharacterised conserved protein UCP015557; KEGG: bxe:Bxe_A1094 hypothetical protein YP_003605692.1 KEGG: bpy:Bphyt_2891 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein YP_003605693.1 PFAM: CsbD family protein; KEGG: bxe:Bxe_A1092 hypothetical protein YP_003605694.1 KEGG: bpy:Bphyt_2893 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_003605695.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: bxe:Bxe_A1090 beta-hexosaminidase YP_003605696.1 KEGG: bpy:Bphyt_2895 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_003605697.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: bxe:Bxe_A1088 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ YP_003605698.1 KEGG: bxe:Bxe_A1087 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_003605699.1 KEGG: bph:Bphy_0842 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_003605700.1 KEGG: bxe:Bxe_A1085 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; manually curated; TIGRFAM: ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_003605701.1 TIGRFAM: signal peptidase I; KEGG: bpy:Bphyt_2900 signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region YP_003605702.1 KEGG: bxe:Bxe_A1083 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein YP_003605703.1 PFAM: glutaredoxin 2; KEGG: bpy:Bphyt_2902 glutaredoxin 2 YP_003605704.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bxe:Bxe_A1081 hypothetical protein; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_003605705.1 PFAM: MucB/RseB family protein; KEGG: bxe:Bxe_A1080 sigma E regulatory protein, MucB/RseB YP_003605706.1 PFAM: Anti sigma-E protein RseA family protein; KEGG: bxe:Bxe_A1079 anti sigma-E protein, RseA YP_003605707.1 KEGG: bpy:Bphyt_2906 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003605708.1 manually curated; KEGG: bpy:Bphyt_2907 hypothetical protein YP_003605709.1 KEGG: bpy:Bphyt_2908 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_003605710.1 KEGG: bpy:Bphyt_2909 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_003605711.1 KEGG: bpy:Bphyt_2910 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003605712.1 KEGG: bpy:Bphyt_2911 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_003605713.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: bpy:Bphyt_2912 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_003605714.1 KEGG: bpy:Bphyt_2913 glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_003605715.1 KEGG: bmj:BMULJ_01056 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_003605716.1 PFAM: protein of unknown function DUF177; KEGG: bpy:Bphyt_2915 protein of unknown function DUF177 YP_003605717.1 KEGG: bpy:Bphyt_2916 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_003605718.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bxe:Bxe_A1067 hypothetical protein YP_003605719.1 PFAM: peptidase S49; KEGG: bxe:Bxe_A1066 family S49 unassigned peptidase YP_003605720.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bxe:Bxe_A1065 hypothetical protein YP_003605721.1 KEGG: bpy:Bphyt_2920 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003605722.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bpy:Bphyt_2921 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein YP_003605723.1 KEGG: bpm:BURPS1710b_2917 ribosomal large subunit pseudouridine synthase C YP_003605724.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: bpy:Bphyt_2922 ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_003605725.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: bxe:Bxe_A1061 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_003605726.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: bxe:Bxe_A1060 molybdopterin-guanine dinucleotide biosynthesis protein A YP_003605727.1 KEGG: bxe:Bxe_A1059 molybdopterin molybdochelatase; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_003605728.1 KEGG: bpy:Bphyt_2926 hypothetical protein YP_003605729.1 PFAM: protein of unknown function DUF195; KEGG: bpy:Bphyt_2928 protein of unknown function DUF195 YP_003605730.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bph:Bphy_0811 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_003605731.1 KEGG: bpy:Bphyt_2930 arsenite-anitmonite efflux pump, ArsB family YP_003605732.1 PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_A1053 hypothetical protein YP_003605733.1 TIGRFAM: nicotinate phosphoribosyltransferase; KEGG: bpy:Bphyt_2932 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_003605734.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bxe:Bxe_A1051 ferredoxin YP_003605735.1 PFAM: CreA family protein; KEGG: bpy:Bphyt_2934 CreA family protein YP_003605736.1 KEGG: bpy:Bphyt_2935 transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003605737.1 PFAM: AzlC family protein; KEGG: bxe:Bxe_A1048 branched chain amino acid efflux pump LivE YP_003605738.1 PFAM: branched-chain amino acid transport; KEGG: bpy:Bphyt_2937 branched-chain amino acid transport YP_003605739.1 KEGG: bpy:Bphyt_2938 hypothetical protein YP_003605740.1 PFAM: UvrD/REP helicase; KEGG: bxe:Bxe_A1045 DNA helicase YP_003605741.1 KEGG: bpy:Bphyt_2940 hypothetical protein YP_003605742.1 KEGG: bxe:Bxe_A1043 hypothetical protein YP_003605743.1 KEGG: bxe:Bxe_A1043 hypothetical protein YP_003605744.1 KEGG: bpy:Bphyt_2942 hypothetical protein YP_003605745.1 KEGG: bxe:Bxe_A1041 multi anti extrusion protein MatE; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003605746.1 PFAM: Bile acid:sodium symporter; KEGG: bxe:Bxe_A1040 BASS family Na(+)/bile acid symporter YP_003605747.1 KEGG: bpy:Bphyt_2946 phospholipase D/transphosphatidylase; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase YP_003605748.1 KEGG: bxe:Bxe_A1038 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_003605749.1 PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A1037 long-chain acyl-CoA thioester hydrolase YP_003605750.1 KEGG: bxe:Bxe_A1034 hypothetical protein YP_003605751.1 SMART: regulatory protein ArsR; KEGG: bxe:Bxe_A1033 ArsR family transcriptional regulator YP_003605752.1 KEGG: bxe:Bxe_A1032 prolin-rich transmembrane protein YP_003605753.1 TIGRFAM: thymidylate synthase; KEGG: bxe:Bxe_A1031 thymidylate synthase; PFAM: thymidylate synthase YP_003605754.1 KEGG: bpy:Bphyt_2955 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_003605756.1 KEGG: bxe:Bxe_A1028 hypothetical protein YP_003605757.1 KEGG: bpy:Bphyt_2957 hypothetical protein YP_003605758.1 KEGG: bpy:Bphyt_2958 conserved hypothetical signal peptide protein YP_003605759.1 KEGG: bpy:Bphyt_2959 hypothetical protein YP_003605760.1 PFAM: peptidase C39; KEGG: bxe:Bxe_A1024 peptidase YP_003605761.1 KEGG: bpy:Bphyt_2961 hypothetical protein YP_003605762.1 KEGG: bpy:Bphyt_2962 hypothetical protein YP_003605763.1 KEGG: bpy:Bphyt_2963 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_003605764.1 KEGG: bpy:Bphyt_2964 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_003605765.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bpy:Bphyt_2965 peptidase U62 modulator of DNA gyrase YP_003605766.1 PFAM: protein of unknown function DUF615; KEGG: bpy:Bphyt_2966 hypothetical protein YP_003605767.1 KEGG: bxe:Bxe_A1017 molybdenum cofactor biosynthesis protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_003605768.1 KEGG: bxe:Bxe_A1016 oligoribonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_003605769.1 KEGG: bxe:Bxe_A1015 M48 family peptidase; PFAM: peptidase M48 YP_003605770.1 KEGG: bpy:Bphyt_2970 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_003605771.1 KEGG: bpy:Bphyt_2971 hypothetical protein YP_003605772.1 PFAM: cobalamin biosynthesis protein CbiB; KEGG: bxe:Bxe_A1011 CobD/CbiB family protein YP_003605773.1 PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A1010 hypothetical protein YP_003605774.1 KEGG: bxe:Bxe_A1009 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_003605775.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: bpy:Bphyt_2975 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003605776.1 KEGG: bxe:Bxe_A1007 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_003605777.1 KEGG: bph:Bphy_0769 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_003605778.1 KEGG: bxe:Bxe_A1005 membrane-bound dehydrogenase YP_003605779.1 KEGG: bpy:Bphyt_2979 hypothetical protein YP_003605780.1 KEGG: bxe:Bxe_A1003 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003605781.1 KEGG: bxe:Bxe_A1002 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003605782.1 KEGG: bpy:Bphyt_2982 D-amino acid dehydrogenase small subunit; PFAM: FAD dependent oxidoreductase YP_003605783.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_2983 acyl-CoA dehydrogenase domain protein YP_003605784.1 PFAM: electron transfer flavoprotein alpha subunit ; electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0999 electron transfer flavoprotein subunit alpha YP_003605785.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0998 electron transfer flavoprotein subunit beta YP_003605786.1 KEGG: bpy:Bphyt_2986 lipoprotein, YaeC family; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_003605787.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_2987 binding-protein-dependent transport systems inner membrane component YP_003605788.1 KEGG: bpy:Bphyt_2988 ABC transporter related; PFAM: ABC transporter related; NIL domain; SMART: ATPase AAA YP_003605789.1 KEGG: bpy:Bphyt_2989 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold YP_003605790.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A0993 enoyl-CoA hydratase YP_003605791.1 KEGG: bxe:Bxe_A0992 histone deacetylase-family protein; PFAM: histone deacetylase superfamily YP_003605792.1 TIGRFAM: lytic murein transglycosylase B; KEGG: bxe:Bxe_A0991 murein transglycosylase YP_003605793.1 KEGG: bxe:Bxe_A0990 cysteine synthase B; TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_003605794.1 KEGG: bpy:Bphyt_2994 helix-hairpin-helix motif YP_003605795.1 KEGG: bpy:Bphyt_2995 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003605796.1 KEGG: bxe:Bxe_A0987 D-alpha,beta-D-heptose 7-phosphate 1-kinase; TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein YP_003605797.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bpy:Bphyt_2997 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_003605798.1 PFAM: hypothetical protein; hypothetical protein; KEGG: bxe:Bxe_A0985 tetratricopeptide repeat protein YP_003605799.1 KEGG: bpy:Bphyt_2999 hypothetical protein YP_003605800.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: bxe:Bxe_A0983 integration host factor subunit beta; SMART: histone family protein DNA-binding protein YP_003605801.1 KEGG: bpy:Bphyt_3001 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein YP_003605802.1 KEGG: bpy:Bphyt_3002 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_003605803.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: bpy:Bphyt_3003 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003605804.1 KEGG: bpy:Bphyt_3004 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase YP_003605805.1 KEGG: bpy:Bphyt_3005 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003605806.1 KEGG: bpy:Bphyt_3006 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein YP_003605807.1 TIGRFAM: phosphoserine aminotransferase; KEGG: bxe:Bxe_A0976 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_003605808.1 PFAM: Protein of unknown function DUF2059; KEGG: bxe:Bxe_A0975 hypothetical protein YP_003605809.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: bpy:Bphyt_3009 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_003605810.1 PFAM: OmpA/MotB domain protein; KEGG: bpy:Bphyt_3010 OmpA/MotB domain protein YP_003605811.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: bpy:Bphyt_3011 3-demethylubiquinone-9 3-methyltransferase; PFAM: methyltransferase type 11 YP_003605812.1 KEGG: bxe:Bxe_A0971 2-phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003605813.1 PFAM: Secreted repeat of unknown function; KEGG: bxe:Bxe_A0969 lipoprotein YP_003605814.1 KEGG: bxe:Bxe_A0968 hypothetical protein YP_003605815.1 PFAM: regulatory protein LysR; KEGG: bpy:Bphyt_3020 transcriptional regulator of molybdate metabolism, LysR family YP_003605816.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bpy:Bphyt_3021 NAD-dependent formate dehydrogenase, gamma subunit YP_003605817.1 KEGG: bpy:Bphyt_3022 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_003605818.1 KEGG: bpy:Bphyt_3023 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molydopterin dinucleotide-binding region YP_003605819.1 KEGG: bxe:Bxe_A0963 formate dehydrogenase delta subunit YP_003605820.1 PFAM: monooxygenase FAD-binding; KEGG: bpy:Bphyt_3025 monooxygenase FAD-binding YP_003605821.1 PFAM: hypothetical protein; hypothetical protein; KEGG: bxe:Bxe_A0959 hypothetical protein YP_003605822.1 PFAM: general substrate transporter; KEGG: bxe:Bxe_A0958 major facilitator superfamily citrate/H(+) symporter YP_003605823.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpy:Bphyt_3030 GCN5-related N-acetyltransferase YP_003605824.1 KEGG: bxe:Bxe_A0956 hypothetical protein YP_003605825.1 PFAM: peptidase C26; KEGG: bpy:Bphyt_3033 peptidase C26 YP_003605826.1 PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_A0953 CPA2 family Na(+)/H(+) antiporter YP_003605827.1 PFAM: Amidase; KEGG: bxe:Bxe_A0952 amidase YP_003605828.1 PFAM: Disulphide bond formation protein DsbB; KEGG: bpy:Bphyt_3040 disulfide bond formation protein B YP_003605829.1 KEGG: bxe:Bxe_A0950 xanthine dehydrogenase, subunit A; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; ferredoxin; CO dehydrogenase flavoprotein domain protein YP_003605830.1 TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; KEGG: bxe:Bxe_A0949 xanthine oxidase / xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead YP_003605831.1 KEGG: bpy:Bphyt_3043 xanthine dehydrogenase accessory protein XdhC; TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182 YP_003605832.1 TIGRFAM: adenosine deaminase; KEGG: bpy:Bphyt_3044 adenosine deaminase; PFAM: adenosine/AMP deaminase YP_003605833.1 KEGG: bxe:Bxe_A0946 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase YP_003605834.1 PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_A0945 oxidoreductase YP_003605835.1 PFAM: Beta-ketoacyl synthase; KEGG: bxe:Bxe_A0941 3-oxoacyl-[acyl-carrier-protein] synthase I YP_003605836.1 PFAM: Beta-ketoacyl synthase; KEGG: bxe:Bxe_A0940 3-oxoacyl-(acyl carrier protein) synthase II YP_003605837.1 KEGG: bpy:Bphyt_3052 short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003605838.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: bpy:Bphyt_3053 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_003605839.1 PFAM: Beta-ketoacyl synthase; KEGG: bxe:Bxe_A0937 3-oxoacyl-(acyl carrier protein) synthase I YP_003605840.1 KEGG: bxe:Bxe_A0936 RND superfamily drug exporter YP_003605841.1 KEGG: bpy:Bphyt_3056 conserved hypothetical signal peptide protein YP_003605842.1 PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_A0934 hypothetical protein YP_003605843.1 KEGG: bpy:Bphyt_3058 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_003605844.1 PFAM: glycosyl transferase family 2; KEGG: bpy:Bphyt_3059 glycosyl transferase family 2 YP_003605845.1 PFAM: AMP-dependent synthetase and ligase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: bpy:Bphyt_3060 AMP-dependent synthetase and ligase YP_003605846.1 KEGG: bpy:Bphyt_3061 hypothetical protein YP_003605847.1 PFAM: phosphopantetheine-binding; KEGG: bpy:Bphyt_3062 acyl carrier protein YP_003605848.1 KEGG: bxe:Bxe_A0928 acyl-carrier protein YP_003605849.1 KEGG: bpy:Bphyt_3064 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003605850.1 KEGG: bpy:Bphyt_3065 hypothetical protein YP_003605851.1 KEGG: bxe:Bxe_A0925 hypothetical protein; manually curated; PFAM: protein of unknown function UPF0016 YP_003605852.1 KEGG: bxe:Bxe_A0924 transmembrane lipoprotein YP_003605853.1 KEGG: bxe:Bxe_A0923 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase YP_003605854.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: bxe:Bxe_A0920 fructose-1,6-bisphosphatase YP_003605855.1 KEGG: bxe:Bxe_A0919 hypothetical protein YP_003605856.1 KEGG: bph:Bphy_0679 hypothetical protein YP_003605857.1 KEGG: bpy:Bphyt_3076 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase, type II YP_003605858.1 SMART: Exonuclease; excinuclease ABC subunit C; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bxe:Bxe_A0914 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; excinuclease ABC subunit C YP_003605859.1 KEGG: bxe:Bxe_A0913 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003605860.1 KEGG: bpy:Bphyt_3079 hypothetical protein YP_003605861.1 PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_3080 porin gram-negative type YP_003605862.1 KEGG: bpy:Bphyt_3081 transcription elongation factor GreB; TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein YP_003605863.1 KEGG: bxe:Bxe_A0908 hypothetical protein YP_003605864.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: bxe:Bxe_A0907 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein YP_003605865.1 KEGG: bpy:Bphyt_3084 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_003605866.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: bxe:Bxe_A0905 guanylate kinase; PFAM: guanylate kinase YP_003605867.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: bxe:Bxe_A0904 hypothetical protein YP_003605868.1 TIGRFAM: ribonuclease PH; KEGG: bxe:Bxe_A0903 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_003605869.1 KEGG: bpy:Bphyt_3088 deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_003605870.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: bxe:Bxe_A0901 coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein YP_003605871.1 KEGG: bcj:BCAM1920 hypothetical protein YP_003605872.1 KEGG: bcj:BCAM1919 hypothetical protein YP_003605873.1 PFAM: Endoribonuclease L-PSP; KEGG: bxe:Bxe_A0900 hypothetical protein YP_003605874.1 KEGG: bxe:Bxe_A0899 hypothetical protein YP_003605875.1 KEGG: bxe:Bxe_A0898 major facilitator superfamily multidrug efflux transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003605876.1 KEGG: bxe:Bxe_A0897 hypothetical protein YP_003605877.1 KEGG: bpy:Bphyt_3098 glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_003605878.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: bpy:Bphyt_3099 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_003605879.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: bpy:Bphyt_3100 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_003605880.1 KEGG: bgl:bglu_2g07180 hypothetical protein YP_003605881.1 KEGG: bpt:Bpet1384 hypothetical protein YP_003605882.1 KEGG: bam:Bamb_6585 catechol 1,2-dioxygenase; TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein YP_003605883.1 TIGRFAM: muconolactone delta-isomerase; KEGG: bam:Bamb_6586 muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase YP_003605884.1 KEGG: bmj:BMULJ_05290 muconate cycloisomerase; TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein YP_003605885.1 KEGG: mgi:Mflv_2543 oligoribonuclease YP_003605886.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bpy:Bphyt_6389 glucose-methanol-choline oxidoreductase YP_003605887.1 KEGG: bpy:Bphyt_6388 hypothetical protein YP_003605888.1 KEGG: bpy:Bphyt_6387 hypothetical protein YP_003605889.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bpy:Bphyt_6386 mandelate racemase/muconate lactonizing protein YP_003605890.1 KEGG: bxe:Bxe_A0893 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_003605891.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: bxe:Bxe_A0892 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003605892.1 KEGG: bpy:Bphyt_3103 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_003605893.1 PFAM: aminotransferase class I and II; KEGG: bpy:Bphyt_3104 aminotransferase YP_003605894.1 PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A0889 transglycosylase SLT domain-containing lipoprotein YP_003605895.1 KEGG: bxe:Bxe_A0888 3-octaprenyl-4hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein YP_003605896.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: bpy:Bphyt_3107 lysine exporter protein (LysE/YggA) YP_003605897.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bxe:Bxe_A0886 serine/threonine dehydratase YP_003605898.1 KEGG: bxe:Bxe_A0885 hypothetical protein YP_003605899.1 KEGG: bpy:Bphyt_3110 hypothetical protein YP_003605900.1 PFAM: Domain of unknown function DUF2520; NADP oxidoreductase coenzyme F420-dependent; KEGG: bxe:Bxe_A0882 hypothetical protein YP_003605901.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bpy:Bphyt_3112 ethyl tert-butyl ether degradation EthD YP_003605902.1 PFAM: protein of unknown function YGGT; KEGG: bxe:Bxe_A0880 hypothetical protein YP_003605903.1 KEGG: bgl:bglu_2g04400 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_003605904.1 TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; KEGG: bpy:Bphyt_3118 tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_003605905.1 TIGRFAM: undecaprenol kinase; KEGG: bpy:Bphyt_3119 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA YP_003605906.1 KEGG: bpy:Bphyt_3120 hypothetical protein YP_003605907.1 KEGG: bxe:Bxe_A0856 hypothetical protein; manually curated; PFAM: protein of unknown function UPF0153 YP_003605908.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: bpy:Bphyt_3122 coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein YP_003605909.1 KEGG: bpy:Bphyt_6765 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003605910.1 KEGG: bpy:Bphyt_6766 hypothetical protein YP_003605911.1 manually curated; TIGRFAM: ribosomal protein S21; KEGG: bgl:bglu_1g18160 30S ribosomal protein S21; PFAM: ribosomal protein S21 YP_003605912.1 KEGG: bvi:Bcep1808_0855 hypothetical protein YP_003605913.1 KEGG: bcm:Bcenmc03_4415 hypothetical protein YP_003605914.1 KEGG: hypothetical protein YP_003605915.1 KEGG: bcn:Bcen_5096 hypothetical protein YP_003605916.1 KEGG: bpr:GBP346_A1158 hypothetical protein YP_003605917.1 KEGG: bph:Bphy_7166 hypothetical protein YP_003605918.1 KEGG: bcm:Bcenmc03_1117 hypothetical protein YP_003605919.1 KEGG: bph:Bphy_5663 hypothetical protein YP_003605920.1 KEGG: bch:Bcen2424_5762 hypothetical protein YP_003605922.1 KEGG: mno:Mnod_8775 hypothetical protein YP_003605923.1 KEGG: bch:Bcen2424_5936 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003605924.1 KEGG: bpy:Bphyt_4393 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003605925.1 KEGG: ethanolamine-phosphate cytidylyltransferase; K00967 ethanolamine-phosphate cytidylyltransferase YP_003605926.1 PFAM: regulatory protein TetR; KEGG: reu:Reut_B4446 TetR family transcriptional regulator YP_003605927.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: reu:Reut_B4445 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003605928.1 PFAM: methyltransferase type 11; KEGG: bac:BamMC406_1995 methyltransferase type 11 YP_003605929.1 manually curated; KEGG: bpy:Bphyt_0891 hypothetical protein YP_003605930.1 PFAM: Protein of unknown function DUF2029; KEGG: sen:SACE_7361 integral membrane protein YP_003605931.1 PFAM: amino acid permease-associated region; KEGG: bpy:Bphyt_3123 amino acid permease-associated region YP_003605932.1 KEGG: bpy:Bphyt_3124 hypothetical protein YP_003605933.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: bpy:Bphyt_3126 peptidase M55 D-aminopeptidase YP_003605934.1 PFAM: peptidase S58; KEGG: bxe:Bxe_A0839 aminopeptidase DmpA YP_003605935.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_3128 binding-protein-dependent transport systems inner membrane component YP_003605936.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_3129 binding-protein-dependent transport systems inner membrane component YP_003605937.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A0836 ABC peptide transporter, periplasmic ligand binding protein YP_003605938.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bpy:Bphyt_3131 ABC transporter related; SMART: ATPase AAA YP_003605939.1 PFAM: peptidase T2 asparaginase 2; KEGG: bpy:Bphyt_3132 asparaginase YP_003605940.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bxe:Bxe_A0833 RpiR family transcriptional regulator YP_003605941.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_3134 major facilitator superfamily MFS_1 YP_003605942.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bpy:Bphyt_3135 pseudouridine synthase YP_003605943.1 KEGG: bpy:Bphyt_3136 hypothetical protein YP_003605944.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_3137 NAD-dependent epimerase/dehydratase YP_003605945.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: bpy:Bphyt_3138 CDP-6-deoxy-delta-3,4-glucoseen reductase YP_003605946.1 KEGG: bpy:Bphyt_3139 acetylornithine transaminase protein; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_003605947.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpy:Bphyt_3140 acetyltransferase YP_003605948.1 PFAM: GYD family protein; KEGG: bpy:Bphyt_2061 GYD family protein YP_003605949.1 KEGG: bxe:Bxe_A0825 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605950.1 KEGG: bpy:Bphyt_3142 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003605951.1 PFAM: inner-membrane translocator; KEGG: bmj:BMULJ_02461 branched-chain amino acid transport system permease protein YP_003605952.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0822 branched chain amino acid ABC transporter inner membrane protein YP_003605953.1 PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A0821 branched chain amino acid ABC transporter periplasmic ligand-binding protein YP_003605954.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: bpy:Bphyt_3146 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein YP_003605955.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bpy:Bphyt_3147 peptidylprolyl isomerase FKBP-type YP_003605956.1 KEGG: bpy:Bphyt_3148 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_003605957.1 KEGG: bxe:Bxe_A0817 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_003605958.1 KEGG: bpy:Bphyt_3150 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_003605959.1 KEGG: bxe:Bxe_A0815 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003605960.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: bxe:Bxe_A0814 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_003605961.1 KEGG: bpy:Bphyt_3153 quinolinate synthetase; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_003605962.1 PFAM: fatty acid desaturase; KEGG: bxe:Bxe_A0812 transmembrane fatty acid desaturase YP_003605963.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_A0811 small-conductance mechanosensitive channel protein YP_003605964.1 PFAM: Fmu (Sun) domain protein; KEGG: bpy:Bphyt_3156 Fmu (Sun) domain protein YP_003605965.1 KEGG: bpy:Bphyt_3157 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_003605966.1 KEGG: bxe:Bxe_A0808 bifunctional riboflavin kinase/FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase YP_003605967.1 KEGG: bpy:Bphyt_3159 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_003605968.1 TIGRFAM: lipoprotein signal peptidase; KEGG: bxe:Bxe_A0806 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_003605969.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: bpy:Bphyt_3161 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_003605970.1 KEGG: bpy:Bphyt_3162 luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_003605971.1 KEGG: bxe:Bxe_A0803 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_003605972.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA; Clp domain protein; ATPase AAA; Clp ATPase-like; KEGG: bpy:Bphyt_3165 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: ATPase AAA YP_003605973.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: bxe:Bxe_A0800 ATP-dependent Clp protease adaptor protein ClpS YP_003605974.1 KEGG: bpy:Bphyt_3167 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003605975.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: bpy:Bphyt_3169 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003605976.1 PFAM: pseudouridine synthase; KEGG: bpy:Bphyt_3170 pseudouridine synthase YP_003605977.1 PFAM: protein of unknown function DUF192; KEGG: bxe:Bxe_A0794 hypothetical protein YP_003605978.1 KEGG: bxe:Bxe_A0793 translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein YP_003605979.1 PFAM: cupin; KEGG: bpy:Bphyt_3173 cupin YP_003605980.1 KEGG: bpy:Bphyt_3174 high-affinity nickel-transporter; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter YP_003605981.1 KEGG: bam:Bamb_3148 HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein YP_003605982.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: bam:Bamb_3149 ABC transporter related; SMART: ATPase AAA YP_003605983.1 KEGG: bcm:Bcenmc03_4225 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver YP_003605984.1 PFAM: outer membrane efflux protein; KEGG: bam:Bamb_3147 outer membrane efflux protein YP_003605985.1 PFAM: aminotransferase class I and II; KEGG: bpy:Bphyt_1805 aminotransferase AlaT YP_003605986.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: bxe:Bxe_A0488 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_003605987.1 KEGG: sti:Sthe_1289 phosphoribosylformylglycinamidine synthase II YP_003605988.1 KEGG: pde:Pden_2409 hypothetical protein YP_003605989.1 PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: vap:Vapar_4459 Mur ligase middle domain protein YP_003605990.1 KEGG: bmj:BMULJ_03301 hypothetical protein YP_003605991.1 PFAM: OmpA/MotB domain protein; KEGG: bmj:BMULJ_04992 OmpA family transmembrane protein YP_003605992.1 KEGG: rso:RS05070 hemagglutinin/hemolysin-related protein YP_003605993.1 KEGG: hypothetical protein YP_003605995.1 PFAM: extracellular solute-binding protein family 5; KEGG: bpy:Bphyt_3175 extracellular solute-binding protein family 5 YP_003605996.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_3176 binding-protein-dependent transport systems inner membrane component YP_003605997.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_3177 binding-protein-dependent transport systems inner membrane component YP_003605998.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bpy:Bphyt_3178 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: ATPase AAA YP_003605999.1 KEGG: bpy:Bphyt_3179 lipoprotein YP_003606000.1 KEGG: bpy:Bphyt_3180 hypothetical protein YP_003606001.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_3181 aldo/keto reductase YP_003606002.1 KEGG: bxe:Bxe_A0783 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003606003.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpy:Bphyt_3183 L-carnitine dehydratase/bile acid-inducible protein F YP_003606004.1 KEGG: bpy:Bphyt_3184 citrate synthase; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Citrate synthase; regulatory protein MerR YP_003606005.1 KEGG: bpy:Bphyt_3185 hypothetical protein YP_003606006.1 KEGG: bxe:Bxe_A0780 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003606007.1 KEGG: bpy:Bphyt_3187 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003606008.1 KEGG: bpy:Bphyt_3188 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_003606009.1 KEGG: bxe:Bxe_A0777 sigma-24 (FecI); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003606010.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: bxe:Bxe_A0776 ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003606011.1 PFAM: protein of unknown function DUF88; KEGG: bpy:Bphyt_3191 protein of unknown function DUF88 YP_003606012.1 KEGG: bxe:Bxe_A0773 hypothetical protein YP_003606013.1 KEGG: hypothetical protein YP_003606014.1 KEGG: bpy:Bphyt_3194 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like YP_003606015.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: bpy:Bphyt_3195 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_003606016.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: bxe:Bxe_A0766 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_003606017.1 PFAM: protein of unknown function DUF343; KEGG: bpy:Bphyt_3197 protein of unknown function DUF343 YP_003606018.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: bxe:Bxe_A0764 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_003606019.1 KEGG: bxe:Bxe_A0763 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein YP_003606020.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A0762 3-hydroxyacyl-CoA dehydrogenase YP_003606021.1 KEGG: bpy:Bphyt_3201 hypothetical protein YP_003606022.1 KEGG: bxe:Bxe_A0760 virulence factor MviN-like; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_003606023.1 KEGG: bpy:Bphyt_3203 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_003606024.1 KEGG: bpy:Bphyt_3204 hypothetical protein YP_003606025.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: bpy:Bphyt_3205 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003606026.1 PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; manually curated; KEGG: bpy:Bphyt_3207 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_003606027.1 PFAM: protein of unknown function DUF520; KEGG: bxe:Bxe_A0754 nucleotide-binding protein YP_003606028.1 PFAM: protein of unknown function DUF205; KEGG: bpy:Bphyt_3209 glycerol-3-phosphate acyltransferase PlsY YP_003606029.1 KEGG: bxe:Bxe_A0752 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_003606030.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A0751 AMP-dependent synthetase and ligase YP_003606031.1 KEGG: bxe:Bxe_A0750 site-specific tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_003606032.1 KEGG: bxe:Bxe_A0749 methylated-DNA-(protein)-cysteine S-methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_003606033.1 KEGG: bpy:Bphyt_3214 iron-sulfur cluster binding protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003606034.1 PFAM: protein of unknown function UPF0079; KEGG: bpy:Bphyt_3215 protein of unknown function UPF0079 YP_003606035.1 PFAM: cell wall hydrolase/autolysin; KEGG: bpy:Bphyt_3216 N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin YP_003606036.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A0745 DMT superfamily drug/metabolite efflux pump YP_003606037.1 PFAM: pirin; KEGG: bpy:Bphyt_3218 pirin YP_003606038.1 KEGG: bpy:Bphyt_3219 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain YP_003606039.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bxe:Bxe_A0742 ThiF family protein YP_003606040.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: bpy:Bphyt_3221 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like YP_003606041.1 KEGG: bxe:Bxe_A0740 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_003606042.1 PFAM: protein of unknown function DUF72; KEGG: bpy:Bphyt_3223 protein of unknown function DUF72 YP_003606043.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bpy:Bphyt_3224 peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A YP_003606044.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_A0737 flavin reductase-like protein YP_003606045.1 KEGG: bxe:Bxe_A0736 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003606046.1 KEGG: bxe:Bxe_A0735 kynureninase; TIGRFAM: arylformamidase; PFAM: cyclase family protein YP_003606047.1 KEGG: bxe:Bxe_A0734 kynureninase; TIGRFAM: kynureninase; PFAM: aminotransferase class V YP_003606048.1 KEGG: bpy:Bphyt_3229 tryptophan 2,3-dioxygenase; TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase YP_003606049.1 KEGG: bgl:bglu_1g27480 hypothetical protein YP_003606050.1 KEGG: bgl:bglu_1g27490 hypothetical protein YP_003606051.1 KEGG: bgl:bglu_1g27490 hypothetical protein YP_003606052.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3231 short chain dehydrogenase YP_003606053.1 KEGG: bpy:Bphyt_3232 xylulokinase; PFAM: carbohydrate kinase, FGGY-like YP_003606054.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bpy:Bphyt_3233 alcohol dehydrogenase GroES domain protein YP_003606055.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_3234 monosaccharide-transporting ATPase YP_003606056.1 KEGG: bpy:Bphyt_3235 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606057.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_3236 periplasmic binding protein/LacI transcriptional regulator YP_003606058.1 KEGG: bpy:Bphyt_3237 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003606059.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: bxe:Bxe_A0730 D-arabinitol 4-dehydrogenase YP_003606060.1 KEGG: bpy:Bphyt_3239 xylulokinase; TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY-like YP_003606061.1 PFAM: sugar-binding domain protein; KEGG: bpy:Bphyt_3240 transcriptional regulator, DeoR family YP_003606062.1 KEGG: bpy:Bphyt_3242 ABC transporter related; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: ATPase AAA YP_003606063.1 KEGG: bxe:Bxe_A0723 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003606064.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_3244 binding-protein-dependent transport systems inner membrane component YP_003606065.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_3245 binding-protein-dependent transport systems inner membrane component YP_003606066.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_3246 extracellular solute-binding protein family 1 YP_003606067.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A0719 sorbitol dehydrogenase YP_003606068.1 PFAM: ferric-uptake regulator; KEGG: bpy:Bphyt_3248 transcriptional regulator, TrmB YP_003606069.1 PFAM: periplasmic solute binding protein; KEGG: bpy:Bphyt_3249 periplasmic solute binding protein YP_003606070.1 KEGG: bxe:Bxe_A0716 ABC Mn2+/Zn2+ transporter, ATPase subunit; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606071.1 PFAM: ABC transporter; KEGG: bpy:Bphyt_3251 ABC transporter YP_003606072.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: bxe:Bxe_A0714 S-formylglutathione hydrolase (FghA); PFAM: esterase YP_003606073.1 KEGG: bpt:Bpet0155 alcohol dehydrogenase class III YP_003606074.1 PFAM: carbohydrate kinase, FGGY-like; KEGG: bxe:Bxe_A0712 sugar kinase protein YP_003606075.1 KEGG: bpy:Bphyt_3255 xanthine permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_003606076.1 KEGG: bxe:Bxe_A0710 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003606077.1 KEGG: bpy:Bphyt_3257 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003606078.1 KEGG: bxe:Bxe_A0708 membrane fusion protein, RND efflux pump; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003606079.1 PFAM: Tetracycline transcriptional repressor MAATS-type domain protein; regulatory protein TetR; KEGG: bxe:Bxe_A0707 TetR family transcriptional regulator YP_003606080.1 PFAM: isochorismatase hydrolase; KEGG: bpy:Bphyt_3260 isochorismatase hydrolase YP_003606081.1 KEGG: bxe:Bxe_A0705 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003606082.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bpy:Bphyt_3262 carbon monoxide dehydrogenase subunit G YP_003606083.1 PFAM: protein of unknown function DUF427; KEGG: bxe:Bxe_A0703 hypothetical protein YP_003606084.1 KEGG: bxe:Bxe_A0702 hypothetical protein YP_003606085.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bpy:Bphyt_3265 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_003606086.1 KEGG: bpy:Bphyt_3266 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003606087.1 KEGG: bpy:Bphyt_3267 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003606088.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: bxe:Bxe_A0698 D-alanyl-D-alanine carboxypeptidase PBP3; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_003606089.1 PFAM: fatty acid hydroxylase; KEGG: bxe:Bxe_A0697 hypothetical protein YP_003606090.1 KEGG: bph:Bphy_0466 GDSL family lipase YP_003606091.1 KEGG: bxe:Bxe_A0695 translation factor SUA5; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein YP_003606092.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: bxe:Bxe_A0694 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003606093.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: bxe:Bxe_A0693 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate(AIR) carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_003606094.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: bxe:Bxe_A0692 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003606095.1 TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: bpy:Bphyt_3275 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003606096.1 TIGRFAM: pyruvate kinase; KEGG: bpy:Bphyt_3276 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_003606097.1 KEGG: bpy:Bphyt_3277 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_003606098.1 PFAM: branched-chain amino acid transport; KEGG: bxe:Bxe_A0688 hypothetical protein YP_003606099.1 PFAM: AzlC family protein; KEGG: bpy:Bphyt_3279 AzlC family protein YP_003606100.1 KEGG: bxe:Bxe_A0686 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003606101.1 PFAM: Zinc finger, CHCC-type; KEGG: bte:BTH_I0659 hypothetical protein YP_003606102.1 KEGG: bpy:Bphyt_3282 lipopolysaccharide heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9 YP_003606103.1 KEGG: bxe:Bxe_A0683 hypothetical protein YP_003606104.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A0682 hydrolase of the alpha/beta-hydrolase fold YP_003606105.1 KEGG: bxe:Bxe_A0681 hypothetical protein YP_003606106.1 KEGG: bxe:Bxe_A0680 hypothetical protein; manually curated; PFAM: peptidase M48 YP_003606107.1 KEGG: bxe:Bxe_A0679 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region YP_003606108.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: dar:Daro_2737 hypothetical protein YP_003606109.1 PFAM: O-antigen polymerase; KEGG: bxe:Bxe_A0678 hypothetical protein YP_003606110.1 KEGG: bxe:Bxe_A0677 type IV fimbrial pilin protein YP_003606111.1 PFAM: Integral membrane protein TerC; KEGG: bpy:Bphyt_3290 integral membrane protein TerC YP_003606112.1 KEGG: bxe:Bxe_A0675 succinyl-CoA synthetase subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein YP_003606113.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: bxe:Bxe_A0674 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003606114.1 KEGG: bxe:Bxe_A0673 hypothetical protein YP_003606115.1 PFAM: regulatory protein RecX; KEGG: bxe:Bxe_A0672 regulatory protein RecX YP_003606116.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: bpy:Bphyt_3295 recombinase A; SMART: ATPase AAA YP_003606117.1 KEGG: bxe:Bxe_A0670 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003606118.1 KEGG: bxe:Bxe_A0669 signal transduction histidine kinases (STHK); PFAM: Two-component sensor kinase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003606119.1 PFAM: general substrate transporter; KEGG: bxe:Bxe_A0668 major facilitator transporter YP_003606120.1 KEGG: bph:Bphy_6535 major facilitator transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_003606121.1 TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; KEGG: bph:Bphy_3974 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein YP_003606122.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bph:Bphy_3975 binding-protein-dependent transport systems inner membrane component YP_003606123.1 KEGG: bph:Bphy_3976 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606124.1 KEGG: bph:Bphy_3977 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989 YP_003606125.1 KEGG: bph:Bphy_3978 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989 YP_003606127.1 TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; KEGG: bph:Bphy_3979 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1 YP_003606128.1 KEGG: bph:Bphy_3980 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase YP_003606129.1 KEGG: bxe:Bxe_A0664 hypothetical protein YP_003606130.1 KEGG: bpy:Bphyt_3300 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003606131.1 KEGG: bxe:Bxe_A0658 major facilitator superfamily drug efflux transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003606132.1 KEGG: bpy:Bphyt_3302 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR family transcriptional regulator; SMART: regulatory protein GntR HTH YP_003606133.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bpy:Bphyt_3303 galactonate dehydratase YP_003606134.1 KEGG: bpy:Bphyt_3304 hypothetical protein YP_003606135.1 PFAM: copper resistance D domain protein; KEGG: bxe:Bxe_A0653 copper-resistance transporter, CopD YP_003606136.1 PFAM: copper resistance protein CopC; KEGG: bxe:Bxe_A0652 copper resistance protein, CopC YP_003606137.1 KEGG: bxe:Bxe_A0651 periplasmic cytochrome c YP_003606138.1 KEGG: bxe:Bxe_A0650 periplasmic cytochrome c; PFAM: cytochrome c class I YP_003606139.1 KEGG: bxe:Bxe_A0649 hemolysin HylII; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_003606140.1 KEGG: bpy:Bphyt_3311 DEAD/DEAH box helicase; PFAM: DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase YP_003606141.1 KEGG: bpy:Bphyt_3312 hypothetical protein YP_003606142.1 KEGG: bxe:Bxe_A0646 hypothetical protein YP_003606143.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_3314 major facilitator superfamily MFS_1 YP_003606144.1 KEGG: bpy:Bphyt_3315 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_003606145.1 KEGG: bpy:Bphyt_3316 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003606146.1 KEGG: bpy:Bphyt_3317 hypothetical protein YP_003606147.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_3318 transcriptional regulator, TetR family YP_003606148.1 KEGG: bxe:Bxe_A0640 hypothetical protein YP_003606149.1 PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_A0639 glycerol-3-phosphate dehydrogenase YP_003606150.1 KEGG: bxe:Bxe_A0638 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY-like YP_003606151.1 KEGG: bxe:Bxe_A0636 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003606152.1 KEGG: bxe:Bxe_A0635 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase YP_003606153.1 KEGG: bxe:Bxe_A0634 XRE family transcriptional regulator; PFAM: hypothetical protein; cupin; SMART: hypothetical protein YP_003606154.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0633 major facilitator transporter YP_003606155.1 KEGG: bxe:Bxe_A0632 hypothetical protein YP_003606156.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A0631 LysR family transcriptional regulator YP_003606157.1 TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: bpy:Bphyt_3329 tRNA-i(6)A37 thiotransferase enzyme MiaB; SMART: Elongator protein 3/MiaB/NifB YP_003606158.1 PFAM: PhoH family protein; KEGG: bxe:Bxe_A0629 PhoH-family protein YP_003606159.1 PFAM: protein of unknown function UPF0054; KEGG: bxe:Bxe_A0628 hypothetical protein YP_003606160.1 PFAM: ChaC family protein; KEGG: bpy:Bphyt_3332 ChaC family protein YP_003606161.1 PFAM: hypothetical protein; transporter-associated region; KEGG: bpy:Bphyt_3333 transporter-associated region YP_003606162.1 KEGG: bpy:Bphyt_3334 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003606163.1 PFAM: glutathione S-transferase domain; KEGG: bxe:Bxe_A0624 glutathione S-transferase YP_003606164.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: bpy:Bphyt_3337 peptidase M24 YP_003606165.1 KEGG: bpy:Bphyt_3338 hypothetical protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase YP_003606166.1 KEGG: bpy:Bphyt_3339 TIM-barrel protein, nifR3 family; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS YP_003606167.1 PFAM: helix-turn-helix Fis-type; KEGG: bpy:Bphyt_3340 DNA-binding protein fis YP_003606168.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: bpy:Bphyt_3341 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_003606169.1 KEGG: bpy:Bphyt_3342 hypothetical protein YP_003606170.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: bxe:Bxe_A0617 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_003606171.1 KEGG: bxe:Bxe_A0616 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein YP_003606172.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: ATPase AAA; Holliday junction DNA helicase RuvB domain; KEGG: bpy:Bphyt_3346 Holliday junction DNA helicase RuvB; SMART: ATPase AAA YP_003606173.1 PFAM: Protein of unknown function DUF2236; KEGG: bxe:Bxe_A0614 hypothetical protein YP_003606174.1 KEGG: bpy:Bphyt_3348 phosphoglycerate mutase; manually curated; PFAM: phosphoglycerate mutase YP_003606175.1 KEGG: bpy:Bphyt_3349 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_003606176.1 SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: bpy:Bphyt_3350 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_003606177.1 PFAM: protein of unknown function UPF0075; KEGG: bpy:Bphyt_3351 anhydro-N-acetylmuramic acid kinase YP_003606178.1 KEGG: bph:Bphy_2562 iron-sulfur cluster insertion protein ErpA; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_003606179.1 PFAM: ribosomal protein S9; KEGG: bph:Bphy_2563 30S ribosomal protein S9 YP_003606180.1 KEGG: bpy:Bphyt_3354 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_003606181.1 PFAM: OsmC family protein; KEGG: bxe:Bxe_A0605 OsmC-like protein YP_003606182.1 KEGG: bpy:Bphyt_3356 hypothetical protein YP_003606183.1 TIGRFAM: dihydroorotase, homodimeric type; KEGG: bxe:Bxe_A0602 dihydroorotase; PFAM: amidohydrolase YP_003606184.1 PFAM: glutamine amidotransferase class-II; KEGG: bpy:Bphyt_3358 glutamine amidotransferase class-II YP_003606185.1 KEGG: bpy:Bphyt_3359 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606186.1 KEGG: bxe:Bxe_A0599 His/Glu/Gln/Arg/opine ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003606187.1 KEGG: bxe:Bxe_A0598 His/Glu/Gln/Arg/opine ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_003606188.1 KEGG: bpy:Bphyt_3362 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003606189.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: bxe:Bxe_A0596 glutamate dehydrogenase (NADP) YP_003606190.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_A0595 LysR family transcriptional regulator YP_003606191.1 KEGG: bpy:Bphyt_3366 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase domain protein; fumarate lyase YP_003606192.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: bxe:Bxe_A0592 gluconate kinase; PFAM: shikimate kinase YP_003606193.1 KEGG: bxe:Bxe_A0591 Na+/gluconate symporter, GntP; TIGRFAM: gluconate transporter; PFAM: gluconate transporter YP_003606194.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: bph:Bphy_2579 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_003606195.1 TIGRFAM: 6-phosphogluconate dehydratase; KEGG: bxe:Bxe_A0589 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003606196.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bph:Bphy_2581 RpiR family transcriptional regulator YP_003606197.1 PFAM: conserved hypothetical protein; KEGG: bpy:Bphyt_3376 hypothetical protein YP_003606198.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: bxe:Bxe_A0579 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase YP_003606199.1 TIGRFAM: DNA polymerase III, delta subunit; KEGG: bxe:Bxe_A0578 DNA polymerase III subunit delta; PFAM: DNA polymerase III delta YP_003606200.1 KEGG: bpy:Bphyt_3379 rare lipoprotein B; manually curated; PFAM: Rare lipoprotein B YP_003606201.1 KEGG: bxe:Bxe_A0576 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_003606202.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bpy:Bphyt_3381 biopolymer transport protein ExbD/TolR YP_003606203.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A0574 MotA/TolQ/ExbB proton channel family protein YP_003606204.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: bxe:Bxe_A0573 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003606205.1 PFAM: SmpA/OmlA domain protein; KEGG: bpy:Bphyt_3384 SmpA/OmlA domain protein YP_003606206.1 PFAM: ferric-uptake regulator; KEGG: bpy:Bphyt_3385 ferric uptake regulator, Fur family YP_003606207.1 KEGG: bpy:Bphyt_3386 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase YP_003606208.1 TIGRFAM: allantoicase; KEGG: bpy:Bphyt_3387 allantoicase; PFAM: Allantoicase region YP_003606209.1 PFAM: sodium:dicarboxylate symporter; KEGG: bpy:Bphyt_3388 C4-dicarboxylate transporter DctA YP_003606210.1 KEGG: bxe:Bxe_A0567 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003606211.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bpy:Bphyt_3390 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_003606212.1 KEGG: bpy:Bphyt_3391 transketolase; TIGRFAM: transketolase; PFAM: transketolase domain protein; transketolase central region YP_003606213.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpy:Bphyt_3393 glyoxalase/bleomycin resistance protein/dioxygenase YP_003606214.1 PFAM: protein of unknown function DUF558; KEGG: bpy:Bphyt_3394 16S ribosomal RNA methyltransferase RsmE YP_003606215.1 PFAM: Barstar (barnase inhibitor); KEGG: bpy:Bphyt_3395 barstar (barnase inhibitor) YP_003606216.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: bpy:Bphyt_3396 guanine-specific ribonuclease N1 and T1 YP_003606217.1 KEGG: bpy:Bphyt_3399 malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase YP_003606218.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: bxe:Bxe_A0556 thiamine monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003606219.1 KEGG: bpy:Bphyt_3401 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A YP_003606220.1 PFAM: CinA domain protein; KEGG: bpy:Bphyt_3402 CinA domain protein YP_003606221.1 PFAM: protein of unknown function DUF985; KEGG: bpy:Bphyt_3403 protein of unknown function DUF985 YP_003606222.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: bpy:Bphyt_3404 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003606223.1 PFAM: Aldose 1-epimerase; KEGG: bpy:Bphyt_3405 aldose 1-epimerase YP_003606224.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: bpy:Bphyt_3407 SMP-30/gluconolaconase/LRE domain protein YP_003606225.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3408 short-chain dehydrogenase/reductase SDR YP_003606226.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0548 L-arabinose transporter permease protein YP_003606227.1 KEGG: bxe:Bxe_A0547 L-arabinose transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606228.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bph:Bphy_2615 monosaccharide-transporting ATPase YP_003606229.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A0545 short chain dehydrogenase YP_003606230.1 PFAM: KDPG and KHG aldolase; KEGG: bpy:Bphyt_3413 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_003606231.1 KEGG: bxe:Bxe_A0543 2-keto-3-deoxygalactonate kinase; PFAM: 2-keto-3-deoxy-galactonokinase YP_003606232.1 KEGG: bpy:Bphyt_3415 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003606233.1 KEGG: bxe:Bxe_A0540 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51 YP_003606234.1 KEGG: bpy:Bphyt_3419 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_003606235.1 PFAM: ribonuclease II; KEGG: bxe:Bxe_A0538 ribonuclease II YP_003606236.1 PFAM: protein of unknown function UPF0227; KEGG: bpy:Bphyt_3421 protein of unknown function UPF0227 YP_003606237.1 KEGG: bxe:Bxe_A0536 UDP-N-acetylmuramate/L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase, MurC; TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_003606238.1 KEGG: bpy:Bphyt_3423 hypothetical protein YP_003606239.1 PFAM: Redoxin domain protein; KEGG: bpy:Bphyt_3424 redoxin domain protein YP_003606240.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: bpy:Bphyt_3425 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_003606241.1 KEGG: bpy:Bphyt_3426 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_003606242.1 KEGG: bxe:Bxe_A0531 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_003606243.1 KEGG: bxe:Bxe_A0530 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase YP_003606244.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: bxe:Bxe_A0529 hypothetical protein YP_003606245.1 PFAM: Redoxin domain protein; KEGG: bxe:Bxe_A0528 thiol peroxidase (atypical 2-Cys peroxiredoxin) YP_003606246.1 PFAM: PfkB domain protein; KEGG: bxe:Bxe_A0527 sugar kinase transferase, PfkB YP_003606247.1 PFAM: 17 kDa surface antigen; KEGG: bxe:Bxe_A0526 outer membrane lipoprotein, SlyB-like YP_003606248.1 KEGG: bpy:Bphyt_3433 histone H1-like protein YP_003606249.1 KEGG: bpy:Bphyt_3434 hypothetical protein YP_003606250.1 KEGG: bpy:Bphyt_3435 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_003606251.1 TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; KEGG: bxe:Bxe_A0521 ribonucleotide-diphosphate reductase subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein YP_003606252.1 KEGG: bpy:Bphyt_3437 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003606253.1 KEGG: bxe:Bxe_A0518 hypothetical protein YP_003606254.1 PFAM: cytochrome c assembly protein; KEGG: bpy:Bphyt_3439 cytochrome c assembly protein YP_003606255.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: bxe:Bxe_A0516 signal recognition particle subunit FFH/SRP54 (SRP54); SMART: ATPase AAA YP_003606256.1 PFAM: phosphoribosyltransferase; KEGG: bxe:Bxe_A0515 hypoxanthine-guanine phosphoribosyltransferase YP_003606257.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bpy:Bphyt_3442 multiple antibiotic resistance (MarC)-related protein YP_003606258.1 TIGRFAM: prolyl-tRNA synthetase; KEGG: bxe:Bxe_A0513 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein YP_003606259.1 PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A0512 (di)nucleoside polyphosphate hydrolase YP_003606260.1 PFAM: Protein of unknown function CNP1-like; KEGG: bxe:Bxe_A0511 lipoprotein YP_003606261.1 SMART: PUA domain containing protein; TIGRFAM: glutamate 5-kinase; KEGG: bxe:Bxe_A0510 gamma-glutamyl kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein YP_003606262.1 KEGG: bpy:Bphyt_3447 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_003606263.1 KEGG: bte:BTH_I1141 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_003606264.1 KEGG: bpy:Bphyt_3449 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_003606265.1 KEGG: bxe:Bxe_A0506 octylprenyl-diphosphate synthase; PFAM: polyprenyl synthetase YP_003606266.1 KEGG: bpy:Bphyt_3451 protein of unknown function DUF21; manually curated; PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region YP_003606267.1 PFAM: type II secretion system protein E; KEGG: bpy:Bphyt_3452 type II secretion system protein E YP_003606268.1 PFAM: Type II secretion system F domain; KEGG: bpy:Bphyt_3453 type II secretion system protein YP_003606269.1 KEGG: bpy:Bphyt_3454 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_003606270.1 KEGG: bpy:Bphyt_3455 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_003606271.1 PFAM: protein of unknown function DUF1342; KEGG: bxe:Bxe_A0500 hypothetical protein YP_003606272.1 PFAM: protein of unknown function DUF329; KEGG: bpy:Bphyt_3457 protein of unknown function DUF329 YP_003606273.1 PFAM: NUDIX hydrolase; KEGG: bpy:Bphyt_3458 mutator MutT protein YP_003606274.1 KEGG: bpy:Bphyt_3459 protein of unknown function DUF815; PFAM: protein of unknown function DUF815; SMART: ATPase AAA YP_003606275.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: bxe:Bxe_A0496 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ YP_003606276.1 KEGG: bpy:Bphyt_3461 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein YP_003606277.1 PFAM: protein of unknown function DUF721; KEGG: bxe:Bxe_A0494 hypothetical protein YP_003606278.1 PFAM: transposase IS4 family protein; KEGG: bph:Bphy_7817 transposase IS4 family protein YP_003606279.1 KEGG: bxe:Bxe_A0493 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_003606280.1 PFAM: Redoxin domain protein; KEGG: bpy:Bphyt_3464 redoxin domain protein YP_003606281.1 KEGG: bpy:Bphyt_3465 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_003606282.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: bpy:Bphyt_3466 cell division protein FtsA; SMART: cell division protein FtsA YP_003606283.1 PFAM: cell division protein FtsQ; polypeptide-transport-associated domain protein FtsQ-type; KEGG: bxe:Bxe_A0489 cell division transmembrane protein, FtsQ YP_003606284.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: bpy:Bphyt_3468 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_003606285.1 KEGG: bpy:Bphyt_3469 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_003606286.1 TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: bpy:Bphyt_3470 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase family 28 YP_003606289.1 KEGG: bpy:Bphyt_3471 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_003606290.1 KEGG: bpy:Bphyt_3472 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003606291.1 TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; KEGG: bpy:Bphyt_3473 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_003606292.1 KEGG: bxe:Bxe_A0482 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003606293.1 KEGG: bxe:Bxe_A0481 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003606294.1 KEGG: bpy:Bphyt_3476 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003606295.1 KEGG: bxe:Bxe_A0479 cell division transmembrane protein, FtsL; TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL YP_003606296.1 KEGG: bxe:Bxe_A0478 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_003606297.1 KEGG: bpy:Bphyt_3479 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_003606298.1 KEGG: bpy:Bphyt_3480 hypothetical protein YP_003606299.1 PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A0475 outer membrane protein (porin) YP_003606300.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bpy:Bphyt_3482 acyl-CoA synthetase YP_003606301.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: bpy:Bphyt_3483 molybdopterin oxidoreductase YP_003606302.1 TIGRFAM: amidohydrolase; KEGG: bpy:Bphyt_3484 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003606303.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A0471 enoyl-CoA hydratase YP_003606304.1 KEGG: bpy:Bphyt_3486 phenylacetic acid degradation protein PaaN; TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase YP_003606305.1 KEGG: bpy:Bphyt_3488 enoyl-CoA hydratase; TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: enoyl-CoA hydratase/isomerase YP_003606306.1 KEGG: bxe:Bxe_A0467 phenylacetic acid degradation-related thioesterase (PaaI); TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein YP_003606307.1 KEGG: bpy:Bphyt_3490 phenylacetate-CoA ligase; TIGRFAM: phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003606308.1 PFAM: MltA domain protein; 3D domain protein; KEGG: bpy:Bphyt_3491 MltA domain protein YP_003606309.1 KEGG: bpy:Bphyt_3492 hypothetical protein YP_003606310.1 PFAM: ApaG domain protein; KEGG: bpy:Bphyt_3493 ApaG YP_003606311.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: bxe:Bxe_A0463 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003606312.1 KEGG: bxe:Bxe_A0462 2-phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003606313.1 TIGRFAM: anthranilate synthase component I; KEGG: bpy:Bphyt_3496 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_003606314.1 KEGG: bpy:Bphyt_3497 anthranilate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_003606315.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: bxe:Bxe_A0459 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like YP_003606316.1 KEGG: bxe:Bxe_A0458 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_003606317.1 PFAM: adenylate cyclase; KEGG: bpy:Bphyt_3500 adenylate cyclase YP_003606318.1 KEGG: bxe:Bxe_A0456 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily YP_003606319.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bxe:Bxe_A0455 (acyl-carrier protein) phosphodiesterase YP_003606320.1 KEGG: bpy:Bphyt_3503 peptidase M61 domain protein; PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003606321.1 PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: bpy:Bphyt_3504 thiol-disulfide interchange protein, DsbC YP_003606322.1 KEGG: bpy:Bphyt_3505 ubiquinone biosynthesis hydroxylase family protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase YP_003606323.1 KEGG: bpy:Bphyt_3506 hypothetical protein YP_003606324.1 KEGG: bpy:Bphyt_3507 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related YP_003606325.1 manually curated; KEGG: pay:PAU_02412 hypothetical protein YP_003606326.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_3509 glycerol-3-phosphate transporter periplasmic binding protein YP_003606327.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_3510 binding-protein-dependent transport systems inner membrane component YP_003606328.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0446 glycerol-3-phosphate transporter membrane protein YP_003606329.1 KEGG: bxe:Bxe_A0445 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: ATPase AAA YP_003606330.1 KEGG: bpy:Bphyt_3514 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606331.1 KEGG: bxe:Bxe_A0442 hypothetical protein YP_003606332.1 KEGG: bpy:Bphyt_3517 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003606333.1 KEGG: bxe:Bxe_A0440 Xaa-Pro aminopeptidase; PFAM: peptidase M24; creatinase YP_003606334.1 KEGG: bxe:Bxe_A0439 hypothetical protein YP_003606335.1 KEGG: bxe:Bxe_A0438 two component transcriptional regulator; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver YP_003606336.1 TIGRFAM: glutamyl-tRNA reductase; KEGG: bpy:Bphyt_3521 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase YP_003606337.1 KEGG: bxe:Bxe_A0436 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_003606338.1 KEGG: bpy:Bphyt_3523 protein-(glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_003606339.1 KEGG: bpy:Bphyt_3524 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin YP_003606340.1 KEGG: bxe:Bxe_A0433 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_003606341.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bpy:Bphyt_3526 extradiol ring-cleavage dioxygenase class III protein subunit B YP_003606342.1 PFAM: amino acid permease-associated region; KEGG: bpy:Bphyt_3527 amino acid permease-associated region YP_003606343.1 KEGG: bpy:Bphyt_3528 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003606344.1 KEGG: bpy:Bphyt_3529 chaperone YP_003606345.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0428 major facilitator superfamily sugar transporter YP_003606346.1 PFAM: nitroreductase; KEGG: bxe:Bxe_A0427 oxidoreductase YP_003606347.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_3532 major facilitator superfamily MFS_1 YP_003606348.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_3533 transcriptional regulator, TetR family YP_003606349.1 PFAM: protein of unknown function DUF1415; KEGG: bpy:Bphyt_3534 protein of unknown function DUF1415 YP_003606350.1 KEGG: bpy:Bphyt_3535 hypothetical protein YP_003606351.1 KEGG: bxe:Bxe_A0422 hypothetical protein YP_003606352.1 KEGG: bxe:Bxe_A0421 hypothetical protein YP_003606353.1 PFAM: HI0933 family protein; KEGG: bpy:Bphyt_3538 HI0933 family protein YP_003606354.1 PFAM: methyltransferase small; KEGG: bxe:Bxe_A0419 hypothetical protein YP_003606355.1 PFAM: protein of unknown function DUF1470; KEGG: bpy:Bphyt_7176 protein of unknown function DUF1470 YP_003606356.1 KEGG: bpy:Bphyt_7175 hypothetical protein YP_003606357.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_7174 alpha/beta hydrolase fold YP_003606358.1 PFAM: Stringent starvation protein B; KEGG: bpy:Bphyt_3540 ClpXP protease specificity-enhancing factor YP_003606359.1 PFAM: glutathione S-transferase domain; KEGG: bpy:Bphyt_3541 glutathione S-transferase domain YP_003606360.1 PFAM: cytochrome c1; KEGG: bxe:Bxe_A0416 cytochrome c1 transmembrane protein YP_003606361.1 PFAM: cytochrome b/b6 domain; KEGG: bxe:Bxe_A0415 cytochrome b subunit transmembrane protein YP_003606362.1 TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; KEGG: bxe:Bxe_A0414 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain YP_003606363.1 PFAM: protein of unknown function DUF34; KEGG: bpy:Bphyt_3545 protein of unknown function DUF34 YP_003606364.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bxe:Bxe_A0412 exported serine protease, HtrA/AlgW-like; SMART: PDZ/DHR/GLGF domain protein YP_003606365.1 KEGG: bpy:Bphyt_3547 sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_003606366.1 KEGG: bxe:Bxe_A0410 sec-independent translocase; TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003606367.1 KEGG: bpy:Bphyt_3549 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_003606368.1 PFAM: histidine triad (HIT) protein; KEGG: bpy:Bphyt_3550 histidine triad (HIT) protein YP_003606369.1 KEGG: bpy:Bphyt_3551 hypothetical protein YP_003606370.1 KEGG: bpy:Bphyt_3552 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_003606371.1 KEGG: bpy:Bphyt_3553 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase YP_003606372.1 KEGG: bpy:Bphyt_3554 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_003606373.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: bpy:Bphyt_3555 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein YP_003606374.1 KEGG: bpy:Bphyt_3556 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_003606375.1 KEGG: bxe:Bxe_A0400 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_003606376.1 KEGG: bpy:Bphyt_3559 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_003606377.1 TIGRFAM: histidinol dehydrogenase; KEGG: bpy:Bphyt_3560 histidinol dehydrogenase; PFAM: histidinol dehydrogenase YP_003606378.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: bpy:Bphyt_3561 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region YP_003606379.1 KEGG: bpy:Bphyt_3562 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_003606380.1 PFAM: BolA family protein; KEGG: bpy:Bphyt_3563 BolA family protein YP_003606381.1 PFAM: ABC transporter; KEGG: bxe:Bxe_A0394 ABC multidrug efflux pump, inner membrane subunit YP_003606382.1 KEGG: bpy:Bphyt_3565 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606383.1 KEGG: bxe:Bxe_A0392 hypothetical protein YP_003606384.1 PFAM: toluene tolerance family protein; KEGG: bpy:Bphyt_3567 toluene tolerance family protein YP_003606385.1 PFAM: VacJ family lipoprotein; KEGG: bxe:Bxe_A0390 transmembrane lipoprotein, VacJ YP_003606386.1 PFAM: Mammalian cell entry related domain protein; KEGG: bph:Bphy_2768 hypothetical protein YP_003606387.1 PFAM: protein of unknown function DUF140; KEGG: bpy:Bphyt_3570 protein of unknown function DUF140 YP_003606388.1 KEGG: bpy:Bphyt_3571 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606389.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; KEGG: bpy:Bphyt_3572 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003606390.1 PFAM: thiazole biosynthesis family protein; KEGG: bpy:Bphyt_3573 thiazole synthase YP_003606391.1 KEGG: bxe:Bxe_A0384 sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_003606392.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_3575 FAD dependent oxidoreductase YP_003606393.1 KEGG: bpy:Bphyt_3576 ABC transporter domain protein; PFAM: ABC transporter domain protein; ABC transporter related; SMART: ATPase AAA YP_003606394.1 KEGG: bpy:Bphyt_3578 hypothetical protein YP_003606395.1 KEGG: bpy:Bphyt_3579 hypothetical protein YP_003606396.1 KEGG: bpy:Bphyt_3580 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003606397.1 PFAM: flagellar L-ring protein; KEGG: bxe:Bxe_A0377 flagellar L-ring protein precursor(basal body L-ring protein), FlgH YP_003606398.1 KEGG: bxe:Bxe_A0376 hypothetical protein YP_003606399.1 KEGG: bpy:Bphyt_3583 lipoprotein YP_003606400.1 KEGG: bpy:Bphyt_3584 hypothetical protein YP_003606401.1 KEGG: bpy:Bphyt_3585 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003606402.1 KEGG: bxe:Bxe_A0372 signal transduction histidine kinases (STHK); PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_003606403.1 KEGG: bpy:Bphyt_3587 protein tyrosine/serine phosphatase YP_003606404.1 KEGG: bpy:Bphyt_3590 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003606405.1 KEGG: bxe:Bxe_A0365 glutamate synthase (NADH) large subunit; PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein YP_003606406.1 PFAM: protein of unknown function DUF1568; KEGG: bxe:Bxe_A0364 transposase-like protein YP_003606407.1 PFAM: OmpW family protein; KEGG: bpy:Bphyt_3593 OmpW family protein YP_003606408.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bpy:Bphyt_3595 protein of unknown function DUF883 ElaB YP_003606409.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bpy:Bphyt_3596 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: metal-dependent phosphohydrolase HD region YP_003606410.1 KEGG: bxe:Bxe_A0360 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_003606411.1 KEGG: bpy:Bphyt_3598 shikimate kinase; PFAM: shikimate kinase YP_003606412.1 KEGG: bxe:Bxe_A0358 fimbrial type-4 assembly signal peptide, PilQ-like; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein YP_003606413.1 KEGG: bpy:Bphyt_3600 hypothetical protein YP_003606414.1 PFAM: Fimbrial assembly family protein; KEGG: bxe:Bxe_A0356 hypothetical protein YP_003606415.1 KEGG: bpy:Bphyt_3602 hypothetical protein YP_003606416.1 KEGG: bpy:Bphyt_3603 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_003606417.1 KEGG: bpy:Bphyt_3604 frataxin-like protein; TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein YP_003606418.1 PFAM: secretory protein YscJ/FliF family protein; KEGG: bpy:Bphyt_3605 lipoprotein YP_003606419.1 KEGG: bpy:Bphyt_3606 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_003606420.1 PFAM: ferric reductase domain protein transmembrane component domain; KEGG: bpy:Bphyt_3607 sulfite oxidase subunit YedZ YP_003606421.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bxe:Bxe_A0349 sulfite oxidase subunit YedY YP_003606422.1 KEGG: bxe:Bxe_A0348 cytochrome c assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein YP_003606423.1 PFAM: ResB family protein; KEGG: bxe:Bxe_A0347 cytochrome c biogenesis protein YP_003606424.1 PFAM: cytochrome c class I; KEGG: bxe:Bxe_A0346 cytochrome c, class I YP_003606425.1 KEGG: bpy:Bphyt_3612 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_003606426.1 KEGG: bxe:Bxe_A0344 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_003606427.1 PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: bpy:Bphyt_3615 protein-disulfide reductase YP_003606428.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: bpy:Bphyt_3616 CutA1 divalent ion tolerance protein YP_003606429.1 KEGG: bpy:Bphyt_3617 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_003606430.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: bph:Bphy_2813 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003606431.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: bxe:Bxe_A0339 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_003606432.1 KEGG: bpy:Bphyt_3620 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_003606433.1 KEGG: bph:Bphy_2816 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_003606434.1 manually curated; TIGRFAM: ribosomal protein L36; KEGG: bgl:bglu_1g02800 50S ribosomal protein L36; PFAM: ribosomal protein L36 YP_003606435.1 KEGG: bpy:Bphyt_3623 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_003606436.1 KEGG: bph:Bphy_2819 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_003606437.1 KEGG: bxe:Bxe_A0333 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15 YP_003606438.1 KEGG: bpy:Bphyt_3626 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_003606439.1 KEGG: bmj:BMULJ_02988 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein YP_003606440.1 KEGG: bxe:Bxe_A0330 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_003606441.1 KEGG: bxe:Bxe_A0329 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_003606442.1 PFAM: ribosomal protein S8; KEGG: bpy:Bphyt_3630 30S ribosomal protein S8 YP_003606443.1 PFAM: ribosomal protein S14; KEGG: bpy:Bphyt_3631 30S ribosomal protein S14 YP_003606444.1 PFAM: ribosomal protein L5; KEGG: bpy:Bphyt_3632 50S ribosomal protein L5 YP_003606445.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: bph:Bphy_2828 50S ribosomal protein L24; SMART: KOW domain protein YP_003606446.1 KEGG: bpy:Bphyt_3634 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_003606447.1 KEGG: bpy:Bphyt_3635 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_003606448.1 KEGG: bpy:Bphyt_3636 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_003606449.1 KEGG: bpy:Bphyt_3637 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_003606450.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: bpy:Bphyt_3638 30S ribosomal protein S3; SMART: KH domain protein YP_003606451.1 KEGG: bpy:Bphyt_3639 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_003606452.1 KEGG: bph:Bphy_2836 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_003606453.1 KEGG: bph:Bphy_2837 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_003606454.1 PFAM: Ribosomal protein L25/L23; KEGG: bpy:Bphyt_3642 50S ribosomal protein L23 YP_003606455.1 PFAM: ribosomal protein L4/L1e; KEGG: bpy:Bphyt_3643 50S ribosomal protein L4 YP_003606456.1 KEGG: bpy:Bphyt_3644 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_003606457.1 KEGG: bpy:Bphyt_3645 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_003606458.1 KEGG: bpy:Bphyt_3659 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein YP_003606459.1 KEGG: bph:Bphy_2843 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein YP_003606460.1 KEGG: bpy:Bphyt_3648 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_003606461.1 KEGG: bph:Bphy_2845 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_003606462.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase; helicase; HRDC domain protein; KEGG: bxe:Bxe_A0308 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase; HRDC domain protein YP_003606463.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: bxe:Bxe_A0307 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein YP_003606464.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; KEGG: bxe:Bxe_A0306 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7 YP_003606465.1 KEGG: bph:Bphy_2849 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_003606466.1 PFAM: ribosomal protein L10; KEGG: bpy:Bphyt_3654 50S ribosomal protein L10 YP_003606467.1 KEGG: bph:Bphy_2851 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_003606468.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: bxe:Bxe_A0302 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_003606469.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: bpy:Bphyt_3657 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein YP_003606470.1 KEGG: bph:Bphy_2854 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_003606471.1 KEGG: bpy:Bphyt_3659 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein YP_003606472.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bpy:Bphyt_3660 lipolytic protein G-D-S-L family YP_003606473.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_3661 FAD dependent oxidoreductase YP_003606474.1 KEGG: bph:Bphy_2857 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein YP_003606475.1 KEGG: bpy:Bphyt_3663 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B YP_003606476.1 KEGG: bpy:Bphyt_3664 phenylacetate-CoA oxygenase, PaaI subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein YP_003606477.1 KEGG: bxe:Bxe_A0292 phenylacetic acid degradation protein PaaD; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59 YP_003606478.1 KEGG: bxe:Bxe_A0291 phenylacetic acid degradation NADH oxidoreductase PaaE; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein YP_003606479.1 PFAM: Domain of unknown function DUF1835; KEGG: bpy:Bphyt_3667 domain of unknown function DUF1835 YP_003606480.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_3668 transcriptional regulator, TetR family YP_003606481.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A0288 GCN5-related N-acetyltransferase YP_003606482.1 KEGG: bxe:Bxe_A0287 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; regulatory protein MarR; SMART: transcription regulator, AsnC-type YP_003606483.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: bxe:Bxe_A0286 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_003606484.1 KEGG: bpy:Bphyt_3672 hypothetical protein YP_003606485.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: bpy:Bphyt_3673 indolepyruvate ferredoxin oxidoreductase YP_003606486.1 KEGG: bpy:Bphyt_3674 malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase YP_003606487.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_3675 major facilitator superfamily MFS_1 YP_003606488.1 KEGG: bpy:Bphyt_3676 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003606489.1 KEGG: bxe:Bxe_A0280 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_003606490.1 PFAM: PEBP family protein; KEGG: bpy:Bphyt_3678 PEBP family protein YP_003606491.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: bxe:Bxe_A0278 flavoprotein YP_003606492.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: bpy:Bphyt_3680 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding YP_003606493.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: bpy:Bphyt_3684 lysine exporter protein (LysE/YggA) YP_003606494.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bpy:Bphyt_3685 6-phosphogluconate dehydrogenase NAD-binding YP_003606495.1 PFAM: protein of unknown function DUF82; KEGG: bxe:Bxe_A0270 hypothetical protein YP_003606496.1 KEGG: bpy:Bphyt_3687 hypothetical protein YP_003606497.1 KEGG: bpy:Bphyt_3688 hypothetical protein YP_003606498.1 KEGG: bxe:Bxe_A0267 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003606499.1 KEGG: bxe:Bxe_A0266 hypothetical protein; manually curated; PFAM: protein of unknown function DUF6 transmembrane YP_003606500.1 KEGG: bpy:Bphyt_3691 hypothetical protein YP_003606501.1 PFAM: Protein of unknown function DUF2242; KEGG: bpy:Bphyt_3692 lipoprotein YP_003606502.1 PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A0262 hypothetical protein YP_003606503.1 KEGG: bxe:Bxe_A0261 hypothetical protein YP_003606504.1 PFAM: Rhomboid family protein; KEGG: cyc:PCC7424_2687 rhomboid family protein YP_003606505.1 KEGG: bpy:Bphyt_3728 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS) YP_003606506.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: bxe:Bxe_A0207 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein YP_003606507.1 PFAM: PP-loop domain protein; KEGG: bxe:Bxe_A0206 hypothetical protein YP_003606508.1 PFAM: dihydroneopterin aldolase; KEGG: bxe:Bxe_A0205 dihydroneopterin aldolase YP_003606509.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3732 short chain dehydrogenase YP_003606510.1 PFAM: protein of unknown function DUF185; KEGG: bpy:Bphyt_3733 protein of unknown function DUF185 YP_003606511.1 KEGG: bph:Bphy_2896 hypothetical protein YP_003606512.1 PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: bxe:Bxe_A0201 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_003606513.1 PFAM: glutathione S-transferase domain; KEGG: bxe:Bxe_A0200 glutathione S-transferase YP_003606514.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_3737 NADH dehydrogenase YP_003606515.1 PFAM: Lytic transglycosylase catalytic; KEGG: bpy:Bphyt_3738 lytic transglycosylase catalytic YP_003606516.1 KEGG: bxe:Bxe_A0197 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_003606517.1 PFAM: regulatory protein MarR; KEGG: bxe:Bxe_A0196 hypothetical protein YP_003606518.1 KEGG: bxe:Bxe_A0195 hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_003606519.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: bpy:Bphyt_3742 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2 YP_003606520.1 PFAM: LamB/YcsF family protein; KEGG: bpy:Bphyt_3743 LamB/YcsF family protein YP_003606521.1 PFAM: protein of unknown function DUF969; KEGG: bxe:Bxe_A0192 hypothetical protein YP_003606522.1 PFAM: protein of unknown function DUF979; KEGG: bpy:Bphyt_3745 protein of unknown function DUF979 YP_003606523.1 PFAM: GumN family protein; KEGG: bpy:Bphyt_3749 GumN family protein YP_003606524.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bpy:Bphyt_3750 dipeptide transporter ATP-binding subunit; SMART: ATPase AAA YP_003606525.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bpy:Bphyt_3751 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: ATPase AAA YP_003606526.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0184 dipeptide/oligopeptide/nickel ABC transporter inner membrane protein YP_003606527.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_3753 alkaline phosphatase YP_003606528.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A0182 ABC dipeptide transporter, periplasmic ligand binding protein YP_003606529.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A0181 ABC dipeptide transporter, periplasmic ligand binding protein YP_003606530.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: bpy:Bphyt_3756 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_003606531.1 PFAM: membrane protein of unknown function; KEGG: bpy:Bphyt_3757 membrane protein of unknown function YP_003606532.1 TIGRFAM: adenosylhomocysteinase; KEGG: bpy:Bphyt_3758 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_003606533.1 PFAM: LrgB family protein; KEGG: bph:Bphy_2920 LrgB family protein YP_003606534.1 PFAM: LrgA family protein; KEGG: bph:Bphy_2921 LrgA family protein YP_003606535.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_3760 transcriptional regulator, LysR family YP_003606536.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bxe:Bxe_A0174 glucose-methanol-choline oxidoreductase YP_003606537.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A0173 acyl-CoA dehydrogenase YP_003606538.1 PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_A0172 coniferyl aldehyde dehydrogenase YP_003606539.1 KEGG: ypy:YPK_1247 hypothetical protein YP_003606540.1 KEGG: bgl:bglu_1g22450 hypothetical protein YP_003606542.1 KEGG: bam:Bamb_5065 hypothetical protein YP_003606543.1 KEGG: hypothetical protein YP_003606544.1 PFAM: type III secretion exporter; KEGG: bxe:Bxe_A0171 flagellar biosynthetic protein FlhB YP_003606545.1 KEGG: bxe:Bxe_A0170 hypothetical protein YP_003606546.1 KEGG: bpy:Bphyt_3767 flagellar protein FliT YP_003606547.1 KEGG: bxe:Bxe_A0168 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_003606548.1 KEGG: bxe:Bxe_A0167 flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_003606549.1 KEGG: bxe:Bxe_A0166 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_003606550.1 KEGG: bxe:Bxe_A0165 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_003606551.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: bxe:Bxe_A0164 flagellar assembly protein H YP_003606552.1 SMART: ATPase AAA; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; KEGG: bpy:Bphyt_3773 flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region YP_003606553.1 KEGG: bpy:Bphyt_3774 flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein YP_003606554.1 PFAM: flagellar hook-length control protein; KEGG: bpy:Bphyt_3775 flagellar hook-length control protein YP_003606555.1 KEGG: lbf:LBF_2150 hypothetical protein YP_003606556.1 KEGG: bph:Bphy_2388 hypothetical protein YP_003606557.1 KEGG: hypothetical protein YP_003606558.1 KEGG: bpm:BURPS1710b_1717 caudovirus prohead protease, manually curated; PFAM: peptidase U35 phage prohead HK97 YP_003606559.1 KEGG: bps:BPSL1142 phage-related protein YP_003606560.1 KEGG: sen:SACE_2448 hypothetical protein YP_003606561.1 KEGG: sus:Acid_1672 hypothetical protein YP_003606562.1 KEGG: nml:Namu_3494 hypothetical protein YP_003606563.1 KEGG: bxe:Bxe_A3654 hypothetical protein YP_003606564.1 KEGG: rme:Rmet_2004 hypothetical protein YP_003606565.1 KEGG: mch:Mchl_2219 squalene-associated FAD-dependent desaturase YP_003606566.1 PFAM: integrase family protein; KEGG: bph:Bphy_3424 integrase family protein YP_003606567.1 PFAM: flagellar basal body-associated protein FliL; KEGG: bpy:Bphyt_3776 flagellar basal body-associated protein FliL YP_003606568.1 KEGG: bpy:Bphyt_3777 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_003606569.1 KEGG: bxe:Bxe_A0157 flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein YP_003606570.1 KEGG: bpy:Bphyt_3779 flagellar biosynthesis protein FliO; TIGRFAM: flagellar biosynthetic protein FliO; PFAM: flagellar biosynthesis protein FliO YP_003606571.1 KEGG: bxe:Bxe_A0155 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_003606572.1 KEGG: bpy:Bphyt_3781 flagellar biosynthesis protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_003606573.1 KEGG: bpy:Bphyt_3782 flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_003606574.1 KEGG: bxe:Bxe_A0151 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_003606575.1 KEGG: bpy:Bphyt_3784 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003606576.1 PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: bxe:Bxe_A0149 hypothetical protein YP_003606577.1 TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; KEGG: bxe:Bxe_A0148 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2 YP_003606578.1 PFAM: flagellar P-ring protein; KEGG: bpy:Bphyt_3787 flagellar basal body P-ring protein YP_003606579.1 PFAM: flagellar L-ring protein; KEGG: bxe:Bxe_A0146 flagellar basal body L-ring protein YP_003606580.1 KEGG: bxe:Bxe_A0145 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_003606581.1 KEGG: bxe:Bxe_A0144 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein YP_003606582.1 KEGG: bxe:Bxe_A0143 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003606583.1 PFAM: flagellar hook capping protein; KEGG: bxe:Bxe_A0142 flagellar basal body rod modification protein YP_003606584.1 KEGG: bxe:Bxe_A0141 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_003606585.1 KEGG: bxe:Bxe_A0140 flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_003606586.1 KEGG: bxe:Bxe_A0139 flagella basal body P-ring formation protein; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein YP_003606587.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: bxe:Bxe_A0138 anti-sigma-28 factor, FlgM YP_003606588.1 PFAM: FlgN family protein; KEGG: bpy:Bphyt_3797 FlgN family protein YP_003606589.1 PFAM: YcfA family protein; KEGG: bpy:Bphyt_3798 YcfA family protein YP_003606590.1 PFAM: protein of unknown function UPF0150; CopG domain protein DNA-binding domain protein; KEGG: bpy:Bphyt_3799 protein of unknown function UPF0150 YP_003606591.1 KEGG: bxe:Bxe_A0134 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein YP_003606592.1 manually curated; KEGG: bpy:Bphyt_3801 flagellar biosynthesis protein FlhG YP_003606593.1 TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: bxe:Bxe_A0132 flagellar biosynthesis regulator FlhF; SMART: ATPase AAA YP_003606594.1 KEGG: bpy:Bphyt_3803 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_003606595.1 KEGG: bpy:Bphyt_3804 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_003606596.1 KEGG: bxe:Bxe_A0128 hypothetical protein YP_003606597.1 KEGG: bxe:Bxe_A0127 hypothetical protein YP_003606598.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: bpy:Bphyt_3807 chemotaxis regulator CheZ YP_003606599.1 KEGG: bxe:Bxe_A0125 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003606600.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: bxe:Bxe_A0124 chemotaxis-specific methylesterase; SMART: response regulator receiver YP_003606601.1 PFAM: CheD family protein; KEGG: bxe:Bxe_A0123 chemoreceptor glutamine deamidase CheD YP_003606602.1 PFAM: MCP methyltransferase CheR-type; KEGG: bxe:Bxe_A0122 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type YP_003606603.1 KEGG: bpy:Bphyt_3813 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003606604.1 KEGG: bxe:Bxe_A0120 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_003606605.1 KEGG: bpy:Bphyt_3815 chemotaxis protein CheA; PFAM: CheY binding; Hpt domain protein; Signal transducing histidine kinase homodimeric; ATP-binding region ATPase domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_003606606.1 KEGG: bpy:Bphyt_3816 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003606607.1 PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_A0117 flagellar motor protein MotB YP_003606608.1 KEGG: bxe:Bxe_A0116 flagellar motor protein MotA YP_003606609.1 PFAM: flagellar transcriptional activator FlhC; KEGG: bxe:Bxe_A0115 transcriptional activator FlhC YP_003606610.1 PFAM: flagellar transcriptional activator; KEGG: bxe:Bxe_A0114 transcriptional activator FlhD YP_003606611.1 PFAM: glycosyl transferase group 1; KEGG: bpy:Bphyt_3821 glycosyl transferase group 1 YP_003606612.1 KEGG: bpy:Bphyt_3822 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_003606613.1 KEGG: bpy:Bphyt_3823 aquaporin Z; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_003606614.1 PFAM: phosphoglycerate mutase; KEGG: bxe:Bxe_A0110 hypothetical protein YP_003606615.1 KEGG: bpy:Bphyt_3825 hypothetical protein YP_003606616.1 KEGG: bpy:Bphyt_3826 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003606617.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: bpy:Bphyt_3827 ATPase BadF/BadG/BcrA/BcrD type YP_003606618.1 KEGG: bxe:Bxe_A0106 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_003606619.1 KEGG: bpy:Bphyt_3829 hypothetical protein YP_003606620.1 KEGG: bpy:Bphyt_3830 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_003606621.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_3831 aldo/keto reductase YP_003606622.1 PFAM: hypothetical protein; hypothetical protein; KEGG: bte:BTH_I3210 TPR domain-containing protein YP_003606623.1 KEGG: mfa:Mfla_2647 hypothetical protein YP_003606624.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mfa:Mfla_2646 Rieske (2Fe-2S) region YP_003606625.1 TIGRFAM: methyltransferase FkbM family; KEGG: pap:PSPA7_4283 methyltransferase, FkbM family protein YP_003606626.1 TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: mei:Msip34_2789 acetyltransferase YP_003606627.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mei:Msip34_2788 short-chain dehydrogenase/reductase SDR YP_003606628.1 KEGG: xcv:XCV2011 3-oxoacyl-[acyl-carrier protein] synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_003606629.1 KEGG: dac:Daci_0615 acyl carrier protein-related protein YP_003606630.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: rme:Rmet_5236 DegT/DnrJ/EryC1/StrS aminotransferase YP_003606631.1 PFAM: glycosyl transferase family 2; KEGG: bph:Bphy_2998 TPR domain-containing protein YP_003606632.1 TIGRFAM: methyltransferase FkbM family; KEGG: pap:PSPA7_4283 methyltransferase, FkbM family protein YP_003606633.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mei:Msip34_2791 Rieske (2Fe-2S) domain protein YP_003606634.1 PFAM: flagellin domain protein; KEGG: bpy:Bphyt_3832 flagellin YP_003606635.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; flagellin hook IN repeat protein; KEGG: bvi:Bcep1808_0198 flagellar hook-associated 2 domain-containing protein YP_003606636.1 KEGG: bmj:BMULJ_03115 hypothetical protein YP_003606637.1 PFAM: cytochrome c class I; KEGG: bxe:Bxe_A0061 cytochrome c family protein YP_003606638.1 PFAM: UvrD/REP helicase; KEGG: bxe:Bxe_A0060 ATP-dependent DNA helicase Rep YP_003606639.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bpy:Bphyt_3878 oxidoreductase domain protein YP_003606640.1 KEGG: bxe:Bxe_A0058 lipoprotein YP_003606641.1 KEGG: bxe:Bxe_A0056 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel YP_003606642.1 KEGG: bpy:Bphyt_3881 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_003606643.1 TIGRFAM: glycine dehydrogenase; KEGG: bpy:Bphyt_3882 glycine dehydrogenase; PFAM: glycine cleavage system P-protein-like YP_003606644.1 KEGG: bpy:Bphyt_3883 hypothetical protein YP_003606645.1 TIGRFAM: L-serine dehydratase 1; KEGG: bpy:Bphyt_3884 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_003606646.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: bxe:Bxe_A0051 thiamine pyrophosphate protein YP_003606647.1 PFAM: Extracellular ligand-binding receptor; KEGG: bpy:Bphyt_3886 extracellular ligand-binding receptor YP_003606648.1 KEGG: bxe:Bxe_A0049 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase YP_003606649.1 KEGG: bpy:Bphyt_3888 hypothetical protein YP_003606650.1 KEGG: bph:Bphy_3020 hypothetical protein YP_003606651.1 PFAM: Uncharacterised protein family UPF0324; KEGG: bxe:Bxe_A0046 hypothetical protein YP_003606652.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase; helicase; KEGG: bpy:Bphyt_3889 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase YP_003606653.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: bxe:Bxe_A0044 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_003606654.1 PFAM: extracellular solute-binding protein family 3; KEGG: bpy:Bphyt_3891 arogenate dehydratase; SMART: extracellular solute-binding protein family 3 YP_003606655.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A0042 AMP-binding domain protein YP_003606656.1 KEGG: bxe:Bxe_A0041 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like YP_003606657.1 SMART: ATPase AAA; TIGRFAM: ATP synthase F1, beta subunit; KEGG: bxe:Bxe_A0040 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003606658.1 KEGG: bxe:Bxe_A0039 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_003606659.1 TIGRFAM: ATP synthase F1, alpha subunit; KEGG: bpy:Bphyt_3896 F0F1 ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003606660.1 KEGG: bpy:Bphyt_3897 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_003606661.1 KEGG: bpy:Bphyt_3898 F0F1 ATP synthase subunit B; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_003606662.1 KEGG: bpy:Bphyt_3899 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_003606663.1 manually curated; TIGRFAM: ATP synthase F0, A subunit; KEGG: bxe:Bxe_A0034 F0F1 ATP synthase subunit A; PFAM: H+transporting two-sector ATPase A subunit YP_003606664.1 PFAM: ATP synthase I chain; KEGG: bxe:Bxe_A0033 ATP synthase protein I YP_003606665.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bpy:Bphyt_3902 ParB-like partition protein; SMART: ParB domain protein nuclease YP_003606666.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bpy:Bphyt_3903 cobyrinic acid ac-diamide synthase YP_003606667.1 KEGG: bpy:Bphyt_3904 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_003606668.1 KEGG: bpy:Bphyt_3905 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_003606669.1 KEGG: bxe:Bxe_A0027 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606670.1 KEGG: bpy:Bphyt_3907 ABC transporter related; PFAM: ABC transporter related; inner-membrane translocator; SMART: ATPase AAA YP_003606671.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0025 branched chain amino acid ABC transporter inner membrane protein YP_003606672.1 PFAM: Extracellular ligand-binding receptor; KEGG: bpy:Bphyt_3909 extracellular ligand-binding receptor YP_003606673.1 PFAM: Extracellular ligand-binding receptor; KEGG: bpy:Bphyt_3910 extracellular ligand-binding receptor YP_003606674.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0021 branched chain amino acid ABC transporter inner membrane protein YP_003606675.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0020 branched chain amino acid ABC transporter inner membrane protein YP_003606676.1 PFAM: Extracellular ligand-binding receptor; KEGG: bpy:Bphyt_3913 extracellular ligand-binding receptor YP_003606677.1 KEGG: bxe:Bxe_A0018 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606678.1 KEGG: bpy:Bphyt_3915 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606679.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bxe:Bxe_A0016 GMC family oxidoreductase YP_003606680.1 KEGG: bpy:Bphyt_3917 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_003606681.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_3918 transcriptional regulator, LysR family YP_003606682.1 PFAM: adenylate cyclase; KEGG: bpy:Bphyt_3919 adenylate cyclase YP_003606683.1 KEGG: bpy:Bphyt_3920 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003606684.1 KEGG: bxe:Bxe_A0011 phenylalanine 4-monooxygenase; TIGRFAM: phenylalanine-4-hydroxylase; PFAM: Aromatic amino acid hydroxylase-like YP_003606685.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: bpy:Bphyt_3922 pterin-4-alpha-carbinolamine dehydratase YP_003606686.1 KEGG: bpy:Bphyt_3923 hypothetical protein YP_003606687.1 KEGG: bph:Bphy_3057 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003606688.1 KEGG: bxe:Bxe_A0007 periplasmic sensor signal transduction histidine kinase; PFAM: Two-component sensor kinase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003606689.1 KEGG: bpy:Bphyt_3926 nuclear protein SET; PFAM: nuclear protein SET; SMART: nuclear protein SET YP_003606690.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bpy:Bphyt_3927 NADH:flavin oxidoreductase/NADH oxidase YP_003606691.1 PFAM: glutamine amidotransferase class-I; KEGG: bpy:Bphyt_3928 glutamine amidotransferase YP_003606692.1 KEGG: bpy:Bphyt_3929 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003606693.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: bpy:Bphyt_3930 carboxylate-amine ligase YP_003606694.1 PFAM: sodium/hydrogen exchanger; KEGG: bpy:Bphyt_3931 sodium/hydrogen exchanger YP_003606695.1 KEGG: bpy:Bphyt_3932 5-methylaminomethyl-2-thiouridine methyltransferase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: protein of unknown function DUF752; FAD dependent oxidoreductase YP_003606696.1 KEGG: bpy:Bphyt_3933 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003606697.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_A4503 cobalamin synthesis protein/P47K YP_003606698.1 PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A4502 hypothetical protein YP_003606699.1 KEGG: bxe:Bxe_A4501 general secretory pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein YP_003606700.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; general secretory system II protein E domain protein; KEGG: bpy:Bphyt_3937 general secretory pathway protein E; SMART: ATPase AAA YP_003606701.1 KEGG: bpy:Bphyt_3938 general secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain YP_003606702.1 KEGG: bxe:Bxe_A4498 general secretory pathway protein C YP_003606703.1 KEGG: bxe:Bxe_A4497 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G YP_003606704.1 TIGRFAM: general secretion pathway protein H; KEGG: bpy:Bphyt_3941 general secretion pathway protein H YP_003606705.1 KEGG: bxe:Bxe_A4495 general secretion pathway protein I; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J YP_003606706.1 KEGG: bpy:Bphyt_3943 general secretory pathway protein J YP_003606707.1 PFAM: general secretion pathway protein K; KEGG: bxe:Bxe_A4493 general secretory pathway protein K YP_003606708.1 KEGG: bxe:Bxe_A4492 general secretory pathway protein L; TIGRFAM: general secretion pathway protein L; PFAM: general secretion pathway L YP_003606709.1 PFAM: general secretion pathway M protein; KEGG: bpy:Bphyt_3946 general secretion pathway M protein YP_003606710.1 KEGG: bxe:Bxe_A4490 general secretory pathway protein N YP_003606711.1 KEGG: bpy:Bphyt_3948 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003606712.1 KEGG: bxe:Bxe_A4488 hypothetical protein YP_003606713.1 KEGG: bxe:Bxe_A4487 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003606714.1 KEGG: bxe:Bxe_A4486 major facilitator superfamily multidrug efflux transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003606715.1 KEGG: bpy:Bphyt_3952 hypothetical protein YP_003606716.1 TIGRFAM: glutamate/cysteine ligase; KEGG: bxe:Bxe_A4484 glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase YP_003606717.1 KEGG: bpy:Bphyt_3954 AlkA domain protein; PFAM: AlkA domain protein; HhH-GPD family protein; SMART: HhH-GPD family protein YP_003606718.1 SMART: Helix-turn-helix, AraC domain; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; KEGG: bpy:Bphyt_3955 transcriptional regulator, AraC family; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain protein; helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein YP_003606719.1 KEGG: GF16887 gene product from transcript GF16887-RA YP_003606720.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpy:Bphyt_3956 glyoxalase/bleomycin resistance protein/dioxygenase YP_003606721.1 PFAM: YaeQ family protein; KEGG: bpy:Bphyt_3957 YaeQ family protein YP_003606722.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_3958 transcriptional regulator, LysR family YP_003606723.1 PFAM: Aldehyde Dehydrogenase; KEGG: bpy:Bphyt_3959 aldehyde dehydrogenase YP_003606724.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_3960 monosaccharide-transporting ATPase YP_003606725.1 KEGG: bpy:Bphyt_3961 L-arabinose transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606726.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_3962 L-arabinose transporter permease protein YP_003606727.1 KEGG: bxe:Bxe_A4478 hypothetical protein YP_003606728.1 KEGG: bpy:Bphyt_3966 hypothetical protein YP_003606729.1 PFAM: histidine triad (HIT) protein; KEGG: bxe:Bxe_A4476 histidine triad (HIT) protein YP_003606730.1 KEGG: bxe:Bxe_A4475 transcriptional regulator; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003606731.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3970 short-chain dehydrogenase/reductase SDR YP_003606732.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: bpy:Bphyt_3973 response regulator receiver modulated diguanylate cyclase; SMART: GGDEF domain containing protein; response regulator receiver YP_003606733.1 KEGG: bxe:Bxe_A4471 hypothetical protein YP_003606734.1 KEGG: bpy:Bphyt_3982 hypothetical protein YP_003606735.1 PFAM: integrase family protein; KEGG: bpy:Bphyt_3983 integrase family protein YP_003606736.1 KEGG: bpy:Bphyt_3984 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_003606737.1 KEGG: bxe:Bxe_A4467 hypothetical protein YP_003606738.1 KEGG: bpy:Bphyt_3986 inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing; membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_003606739.1 KEGG: bpy:Bphyt_3987 hypothetical protein; manually curated; PFAM: protein of unknown function DUF37 YP_003606740.1 KEGG: bpy:Bphyt_3988 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein YP_003606741.1 KEGG: bpy:Bphyt_3989 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34 YP_003606742.1 KEGG: pay:PAU_03330 phage related lysozyme; manually curated; PFAM: glycoside hydrolase family 24 YP_003606743.1 KEGG: ara:Arad_7761 urease-associated protein YP_003606744.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_B2473 TonB-dependent siderophore receptor YP_003606745.1 KEGG: bxe:Bxe_B2472 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein YP_003606746.1 KEGG: bxe:Bxe_B2471 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003606747.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: radical SAM protein; KEGG: bxe:Bxe_B2470 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB YP_003606748.1 PFAM: coenzyme PQQ synthesis D; KEGG: bxe:Bxe_B2469 pyrroloquinoline quinone synthesis D YP_003606749.1 TIGRFAM: coenzyme PQQ biosynthesis protein C; KEGG: bxe:Bxe_B2468 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 domain protein YP_003606750.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: bxe:Bxe_B2467 pyrroloquinoline quinone biosynthesis protein PqqB YP_003606751.1 KEGG: bxe:Bxe_B2466 prolyl aminopeptidase; PFAM: alpha/beta hydrolase fold YP_003606752.1 PFAM: cytochrome B561; KEGG: bxe:Bxe_B2465 cytochrome b561 YP_003606753.1 TIGRFAM: formylmethanofuran dehydrogenase subunit C; KEGG: bxe:Bxe_B2464 formylmethanofuran dehydrogenase, subunit C; PFAM: glutamate synthase subunit alpha domain protein YP_003606754.1 TIGRFAM: formylmethanofuran/tetrahydromethanopterin N-formyltransferase; KEGG: bxe:Bxe_B2463 formylmethanofuran--tetrahydromethanopterin formyltransferase; PFAM: formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr) YP_003606755.1 KEGG: bxe:Bxe_B2462 formylmethanofuran dehydrogenase, subunit A; TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: amidohydrolase YP_003606756.1 KEGG: bxe:Bxe_B2461 formylmethanofuran dehydrogenase, subunit B YP_003606757.1 PFAM: histidine biosynthesis protein; KEGG: bxe:Bxe_B2460 phosphoribosylformimino-5-aminoimidazole carboxamideribotide isomerase YP_003606758.1 PFAM: protein of unknown function DUF201; KEGG: bxe:Bxe_B2459 hypothetical protein YP_003606759.1 KEGG: bxe:Bxe_B2458 tetrahydromethanopterin biosynthesis protein, hydrolase; TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: hydantoinase/oxoprolinase YP_003606760.1 KEGG: bxe:Bxe_B2457 tetrahydromethanopterin biosynthesis protein, kinase YP_003606761.1 PFAM: protein of unknown function DUF556; KEGG: bxe:Bxe_B2456 hypothetical protein YP_003606762.1 PFAM: protein of unknown function DUF447; KEGG: bxe:Bxe_B2455 hypothetical protein YP_003606763.1 KEGG: bxe:Bxe_B2453 ribulose bisophosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; ribulose bisphosphate carboxylase, large subunit-like YP_003606764.1 KEGG: bxe:Bxe_B2452 ribulose 1,5-bisphosphate carboxylase small subunit; PFAM: ribulose bisphosphate carboxylase small chain YP_003606765.1 TIGRFAM: CbbX protein; PFAM: ATPase AAA central domain protein; KEGG: bxe:Bxe_B2451 CbbX-like protein, ATPase AAA; SMART: AAA ATPase YP_003606766.1 PFAM: inositol phosphatase/fructose-16-bisphosphatase; KEGG: bxe:Bxe_B2450 fructose-1,6-bisphosphatase YP_003606767.1 KEGG: bxe:Bxe_B2449 phosphoribulokinase; PFAM: phosphoribulokinase/uridine kinase YP_003606768.1 TIGRFAM: transketolase; KEGG: bxe:Bxe_B2448 transketolase; PFAM: transketolase; transketolase central region YP_003606769.1 TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: bxe:Bxe_B2447 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003606770.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: bxe:Bxe_B2446 ribulose-5-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003606771.1 PFAM: dihydropteroate synthase DHPS; KEGG: bxe:Bxe_B2441 tetrahydromethanopterin biosynthesis protein YP_003606772.1 PFAM: flavoprotein; KEGG: bxe:Bxe_B2440 dihydromethanopterin reductase (AfpA) YP_003606773.1 KEGG: bxe:Bxe_B2439 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_003606774.1 PFAM: dihydroneopterin aldolase; KEGG: bxe:Bxe_B2438 dihydroneopterin aldolase YP_003606775.1 KEGG: bxe:Bxe_B2437 hypothetical protein YP_003606776.1 KEGG: bxe:Bxe_B2436 formaldehyde-activating protein; TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae) YP_003606777.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: bxe:Bxe_B2435 triphosphoribosyl-dephospho-CoA synthetase YP_003606778.1 KEGG: bxe:Bxe_B2434 30S ribosomal protein S6P modification protein; TIGRFAM: alpha-L-glutamate ligase; PFAM: RimK domain protein ATP-grasp YP_003606779.1 TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; KEGG: bxe:Bxe_B2433 N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase; PFAM: Methenyltetrahydromethanopterin cyclohydrolase YP_003606780.1 PFAM: protein of unknown function DUF201; KEGG: bxe:Bxe_B2432 hypothetical protein YP_003606781.1 PFAM: methylene-tetrahydromethanopterin dehydrogenase; KEGG: bxe:Bxe_B2431 methylene-tetrahydromethanopterin dehydrogenase(NAD+/NADP+) (MtdB) YP_003606782.1 KEGG: bxe:Bxe_B2430 beta-ribofuranosylaminobenzene 5'-phosphate synthase; TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; GHMP kinase domain protein YP_003606783.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: bxe:Bxe_B2429 pterin-4-alpha-carbinolamine dehydratase YP_003606784.1 KEGG: bxe:Bxe_B2427 methanol dehydrogenase-like protein (XoxF); TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone YP_003606785.1 KEGG: bxe:Bxe_B2426 methanol dehydrogenase-like protein, cytochrome CL (XoxG) YP_003606786.1 SMART: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_B2425 ABC transporter periplasmic ligand binding protein YP_003606787.1 KEGG: bxe:Bxe_B2424 hypothetical protein YP_003606788.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B2423 LysR family transcriptional regulator YP_003606789.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: bxe:Bxe_B2421 MxaR-like protein YP_003606790.1 KEGG: bxe:Bxe_B2420 MxaS-like protein YP_003606791.1 KEGG: bxe:Bxe_B2418a hypothetical protein YP_003606792.1 SMART: von Willebrand factor A; KEGG: bxe:Bxe_B2418 MxaC-like protein YP_003606793.1 KEGG: bxe:Bxe_B2417 MxaK-like protein YP_003606794.1 KEGG: bxe:Bxe_B2416 MxaL-like protein YP_003606795.1 KEGG: hypothetical protein, conserved YP_003606796.1 KEGG: bmj:BMULJ_02621 AraC subfamily transcriptional regulator; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003606797.1 KEGG: bpy:Bphyt_2607 hypothetical protein YP_003606798.1 KEGG: bpy:Bphyt_2603 hypothetical protein YP_003606799.1 KEGG: bph:Bphy_1873 Mu P family protein YP_003606800.1 manually curated; KEGG: cvi:CV_2126 hypothetical protein YP_003606802.1 PFAM: ThiJ/PfpI domain protein; KEGG: bvi:Bcep1808_2772 ThiJ/PfpI domain-containing protein YP_003606803.1 KEGG: bph:Bphy_7197 hypothetical protein YP_003606804.1 KEGG: bph:Bphy_4965 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606805.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bcj:BCAS0341 binding-protein-dependent transporter component YP_003606806.1 TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: bcj:BCAS0342 hypothetical protein; SMART: extracellular solute-binding protein family 3 YP_003606807.1 TIGRFAM: taurine ABC transporter periplasmic binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: bph:Bphy_6080 taurine ABC transporter periplasmic binding protein; SMART: extracellular solute-binding protein family 3 YP_003606808.1 KEGG: bph:Bphy_6081 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606809.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_6082 binding-protein-dependent transport systems inner membrane component YP_003606810.1 KEGG: bxe:Bxe_C0127 polar amino acid ABC transporter periplasmic ligand-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003606811.1 KEGG: bph:Bphy_7228 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003606812.1 KEGG: bph:Bphy_7229 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003606813.1 PFAM: succinylglutamate desuccinylase/aspartoacylase; KEGG: bpm:BURPS1710b_A0742 succinylglutamate desuccinylase/aspartoacylase family protein YP_003606814.1 PFAM: MmgE/PrpD family protein; KEGG: bph:Bphy_7071 hypothetical protein YP_003606815.1 KEGG: bcm:Bcenmc03_6760 HAD family hydrolase; manually curated; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB YP_003606816.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: bmj:BMULJ_03380 Zn-dependent NADPH:quinone reductase YP_003606817.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bmj:BMULJ_03381 LysR family transcriptional regulator YP_003606818.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_5189 major facilitator transporter YP_003606819.1 KEGG: bph:Bphy_5190 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003606820.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_5191 major facilitator transporter YP_003606821.1 PFAM: amidohydrolase; KEGG: bph:Bphy_5192 amidohydrolase YP_003606822.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_B5695 regulatory protein, LysR:LysR, substrate-binding YP_003606823.1 PFAM: carboxymuconolactone decarboxylase; KEGG: sme:SMa0316 hypothetical protein YP_003606824.1 KEGG: bac:BamMC406_3384 hypothetical protein YP_003606825.1 PFAM: protein of unknown function DUF839; KEGG: bxe:Bxe_B0622 exported alkaline phosphatase YP_003606826.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcj:BCAM1559 acetyltransferase YP_003606827.1 KEGG: bpd:BURPS668_A2408 cystine-binding periplasmic protein FliY; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003606828.1 KEGG: bpm:BURPS1710b_A0739 luciferase-like monooxygenase superfamily protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_003606829.1 KEGG: bpl:BURPS1106A_A2267 flavin-dependent oxidoreductase YP_003606830.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: ABC transporter; binding-protein-dependent transport systems inner membrane component; KEGG: bpl:BURPS1106A_A2265 ABC-type polar amino acid transporter, ATPase component; SMART: ATPase AAA YP_003606831.1 KEGG: bam:Bamb_3864 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003606832.1 KEGG: bxe:Bxe_C0153 taurine dioxygenase; PFAM: taurine catabolism dioxygenase TauD/TfdA YP_003606833.1 PFAM: NMT1/THI5 like domain protein; KEGG: bxe:Bxe_C0154 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_003606834.1 KEGG: bxe:Bxe_C0155 nitrate/sulfonate/bicarbonate ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003606835.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_C0156 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_003606836.1 PFAM: selenium-binding protein; KEGG: bpy:Bphyt_2095 selenium-binding protein YP_003606837.1 KEGG: bxe:Bxe_C0089 hypothetical protein YP_003606838.1 KEGG: bph:Bphy_4169 hypothetical protein YP_003606839.1 KEGG: bxe:Bxe_B0404 phage SPO1 DNA polymerase-related protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily YP_003606840.1 PFAM: protein of unknown function DUF72; KEGG: bpy:Bphyt_2348 protein of unknown function DUF72 YP_003606841.1 KEGG: bxe:Bxe_C1279 hypothetical protein YP_003606842.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: bxe:Bxe_B0832 oxidoreductase YP_003606843.1 KEGG: bcj:BCAM2435 MarR family regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003606844.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bac:BamMC406_5124 vanillate monooxygenase YP_003606845.1 KEGG: bvi:Bcep1808_3499 ferredoxin; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein YP_003606846.1 KEGG: nodulin MtN21 family protein YP_003606847.1 KEGG: rso:RSc2888 hypothetical protein YP_003606848.1 KEGG: bxe:Bxe_C0079 cytochrome C oxidase subunit II; TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C class I YP_003606849.1 TIGRFAM: cytochrome C oxidase subunit I; KEGG: bxe:Bxe_C0080 cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_003606850.1 PFAM: cytochrome C oxidase subunit III; KEGG: bxe:Bxe_C0081 cytochrome C oxidase subunit III YP_003606851.1 KEGG: bxe:Bxe_A2186 hypothetical protein YP_003606852.1 KEGG: bxe:Bxe_C0083 alcohol dehydrogenase cytochrome C subunit; PFAM: cytochrome C class I YP_003606853.1 KEGG: bvi:Bcep1808_5978 fis family transcriptional regulator YP_003606854.1 KEGG: bpy:Bphyt_0181 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003606855.1 KEGG: rme:Rmet_1777 Na/Pi cotransporter II-related; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein YP_003606856.1 KEGG: rpf:Rpic12D_2089 hypothetical protein YP_003606857.1 KEGG: bpy:Bphyt_1779 hypothetical protein YP_003606858.1 KEGG: bpy:Bphyt_5168 transcriptional regulator, GntR family YP_003606859.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_6376 major facilitator transporter YP_003606860.1 PFAM: amidohydrolase; KEGG: bph:Bphy_6375 amidohydrolase YP_003606861.1 KEGG: bph:Bphy_6374 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: dimethylmenaquinone methyltransferase YP_003606862.1 KEGG: lch:Lcho_1278 hypothetical protein YP_003606863.1 KEGG: bph:Bphy_3735 hypothetical protein YP_003606864.1 manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bph:Bphy_3734 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain YP_003606865.1 TIGRFAM: capsular exopolysaccharide family; KEGG: bph:Bphy_3733 exopolysaccharide tyrosine-protein kinase; PFAM: lipopolysaccharide biosynthesis protein YP_003606866.1 PFAM: glycosyl transferase group 1; KEGG: bph:Bphy_3732 glycosyl transferase group 1 YP_003606867.1 KEGG: bph:Bphy_3731 hypothetical protein YP_003606868.1 PFAM: glycosyl transferase family 2; KEGG: bph:Bphy_3730 glycosyl transferase YP_003606869.1 PFAM: polysaccharide biosynthesis protein; KEGG: bph:Bphy_3729 polysaccharide biosynthesis protein YP_003606870.1 PFAM: glycosyl transferase group 1; KEGG: bph:Bphy_3728 glycosyl transferase group 1 YP_003606871.1 PFAM: O-antigen polymerase; KEGG: bph:Bphy_3726 O-antigen polymerase YP_003606872.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bph:Bphy_3725 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase YP_003606873.1 KEGG: bph:Bphy_3724 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003606874.1 KEGG: bph:Bphy_4605 hypothetical protein YP_003606875.1 KEGG: bph:Bphy_3723 hypothetical protein YP_003606876.1 KEGG: bpy:Bphyt_6119 hypothetical protein YP_003606877.1 KEGG: bpy:Bphyt_6104 hypothetical protein YP_003606878.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_6102 major facilitator superfamily MFS_1 YP_003606879.1 PFAM: succinylglutamate desuccinylase/aspartoacylase; KEGG: bxe:Bxe_B1484 hypothetical protein YP_003606880.1 TIGRFAM: tartrate dehydrogenase; KEGG: bxe:Bxe_B1486 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003606881.1 KEGG: dae:Dtox_0138 hypothetical protein YP_003606882.1 KEGG: avi:Avi_3476 hypothetical protein YP_003606883.1 KEGG: bpy:Bphyt_5054 hypothetical protein YP_003606884.1 TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain protein; hypothetical protein; helix-turn-helix Fis-type; KEGG: bxe:Bxe_B2303 sigma-54 dependent trancsriptional regulator; SMART: ATPase AAA; PAS domain containing protein YP_003606885.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: bxe:Bxe_B2302 methylcitrate synthase; PFAM: citrate synthase YP_003606886.1 KEGG: bxe:Bxe_B2301 aconitate hydratase; TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; PFAM: aconitate hydratase domain protein YP_003606887.1 KEGG: bpy:Bphyt_6079 AcnD-accessory protein PrpF; TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453 YP_003606888.1 KEGG: rme:Rmet_1780 methyltransferase type 11 YP_003606889.1 PFAM: major facilitator superfamily MFS_1; KEGG: lch:Lcho_2156 major facilitator transporter YP_003606890.1 PFAM: protein of unknown function DUF305; KEGG: bxe:Bxe_B2299 hypothetical protein YP_003606891.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: bpy:Bphyt_6066 antibiotic biosynthesis monooxygenase YP_003606892.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: bpy:Bphyt_6065 alcohol dehydrogenase zinc-binding domain protein YP_003606893.1 KEGG: bpy:Bphyt_6064 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606894.1 PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; KEGG: bpy:Bphyt_6063 shikimate dehydrogenase substrate binding domain protein YP_003606895.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: pna:Pnap_2707 FAD-binding dehydrogenase YP_003606896.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bph:Bphy_6102 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_003606897.1 PFAM: NIPSNAP family containing protein; KEGG: bph:Bphy_6103 NIPSNAP family protein YP_003606898.1 PFAM: xylose isomerase; KEGG: bph:Bphy_6104 xylose isomerase domain-containing protein YP_003606899.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_6105 major facilitator transporter YP_003606900.1 KEGG: bph:Bphy_6106 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003606901.1 KEGG: bph:Bphy_5784 hypothetical protein YP_003606902.1 KEGG: bpy:Bphyt_6052 ATPase AAA central domain protein; PFAM: ATPase AAA; peptidase M41 FtsH extracellular; peptidase M41; SMART: ATPase AAA YP_003606903.1 KEGG: bpy:Bphyt_6051 hypothetical protein YP_003606904.1 PFAM: acyltransferase 3; KEGG: bpy:Bphyt_6049 acyltransferase 3 YP_003606905.1 PFAM: conserved hypothetical protein; KEGG: bpy:Bphyt_6048 hypothetical protein YP_003606906.1 PFAM: Tannase and feruloyl esterase; KEGG: bpy:Bphyt_6047 feruloyl esterase YP_003606907.1 KEGG: bpy:Bphyt_6046 hypothetical protein YP_003606908.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: reh:H16_B2354 signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_003606909.1 KEGG: bpy:Bphyt_6045 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003606910.1 PFAM: ABC transporter; KEGG: bpy:Bphyt_6044 ABC-2 type transporter YP_003606911.1 KEGG: bpy:Bphyt_6042 transcriptional regulator, LuxR family; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_003606912.1 KEGG: bpy:Bphyt_6041 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003606913.1 KEGG: bpy:Bphyt_6040 hypothetical protein YP_003606914.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bpy:Bphyt_6733 lipolytic protein G-D-S-L family YP_003606915.1 KEGG: bph:Bphy_4688 hypothetical protein YP_003606916.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2270 major facilitator superfamily (MFS)oxalate/formate antiporter YP_003606917.1 KEGG: bpy:Bphyt_6034 hypothetical protein YP_003606918.1 KEGG: bpy:Bphyt_6033 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003606919.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rme:Rmet_4360 thiamine pyrophosphate enzyme-like TPP binding region YP_003606920.1 KEGG: bxe:Bxe_B2267 formyl-coenzyme A transferase; TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_003606921.1 PFAM: fumarylacetoacetate hydrolase; KEGG: bpy:Bphyt_6031 fumarylacetoacetate hydrolase YP_003606922.1 KEGG: bpy:Bphyt_6030 NAD(P) transhydrogenase beta subunit YP_003606923.1 KEGG: bxe:Bxe_B2264 hypothetical protein YP_003606924.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_6028 LysR family transcriptional regulator YP_003606925.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2262 major facilitator superfamily (MFS)oxalate/formate antiporter YP_003606926.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_6026 LysR family transcriptional regulator YP_003606927.1 KEGG: bpy:Bphyt_6025 aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003606928.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bxe:Bxe_B2259 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003606929.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bpy:Bphyt_6011 lysine exporter protein (LysE/YggA) YP_003606930.1 KEGG: bpy:Bphyt_6010 hypothetical protein YP_003606931.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: bpy:Bphyt_6009 protein of unknown function UPF0029 YP_003606932.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bpy:Bphyt_6008 lysine exporter protein (LysE/YggA) YP_003606933.1 PFAM: DSBA oxidoreductase; KEGG: bpy:Bphyt_6005 DsbA oxidoreductase YP_003606934.1 KEGG: bxe:Bxe_B2240 hypothetical protein YP_003606935.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B2239 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003606936.1 KEGG: bpy:Bphyt_6002 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003606937.1 KEGG: bxe:Bxe_B2237 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer YP_003606938.1 TIGRFAM: phosphoenolpyruvate phosphomutase; KEGG: bxe:Bxe_B2235 2,3-dimethylmalate lyase YP_003606939.1 KEGG: bxe:Bxe_B2234 thiamine pyrophosphate enzyme; TIGRFAM: phosphonopyruvate decarboxylase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding YP_003606940.1 KEGG: bpy:Bphyt_5997 2-aminoethylphosphonate aminotransferase; TIGRFAM: 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V YP_003606941.1 KEGG: bpy:Bphyt_5996 hypothetical protein YP_003606942.1 PFAM: LmbE family protein; KEGG: bpy:Bphyt_5995 LmbE family protein YP_003606943.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_B1335 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II YP_003606944.1 KEGG: bpy:Bphyt_5992 hypothetical protein YP_003606945.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bxe:Bxe_B2226 xanthine dehydrogenase, molybdenum binding subunit apoprotein YP_003606946.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_B2225 oxidoreductase YP_003606947.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_B2224 2Fe-2S ferredoxin YP_003606948.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: bxe:Bxe_B0324 hydrogenase/oxidoreductase subunit YP_003606949.1 KEGG: bxe:Bxe_B0325 formate hydrogenlyase subunit YP_003606950.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bxe:Bxe_B0326 hydrogenase 4 subunit F YP_003606951.1 KEGG: bpd:BURPS668_A1615 hydrogenase, membrane subunit YP_003606952.1 KEGG: bte:BTH_II1262 formate hydrogenlyase subunit 4 YP_003606953.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bpd:BURPS668_A1617 hydrogenase 4 subunit B YP_003606954.1 PFAM: protein of unknown function DUF1275; KEGG: bcm:Bcenmc03_6165 hypothetical protein YP_003606955.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: bac:BamMC406_6266 CopG/DNA-binding domain-containing protein YP_003606956.1 KEGG: bcj:BCAS0456 hypothetical protein YP_003606957.1 KEGG: bac:BamMC406_6268 alkylphosphonate utilization operon protein PhnA; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein YP_003606958.1 KEGG: bpy:Bphyt_5986 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase YP_003606959.1 PFAM: CsbD family protein; KEGG: bxe:Bxe_B2220 hypothetical protein YP_003606960.1 KEGG: bpy:Bphyt_5984 hypothetical protein YP_003606961.1 PFAM: OmpA/MotB domain protein; KEGG: bpy:Bphyt_5983 OmpA/MotB domain protein YP_003606962.1 PFAM: polysaccharide deacetylase; KEGG: bpy:Bphyt_5979 polysaccharide deacetylase YP_003606963.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_5978 short-chain dehydrogenase/reductase SDR YP_003606964.1 KEGG: bpy:Bphyt_5977 hypothetical protein YP_003606965.1 PFAM: silent information regulator protein Sir2; KEGG: bpy:Bphyt_5976 silent information regulator protein Sir2 YP_003606966.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bxe:Bxe_B2212 hypothetical protein YP_003606967.1 PFAM: protein of unknown function DUF938; KEGG: bpy:Bphyt_5974 protein of unknown function DUF938 YP_003606968.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: bxe:Bxe_B2210 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding YP_003606969.1 KEGG: bxe:Bxe_B2209 hypothetical protein YP_003606970.1 KEGG: bxe:Bxe_B2207 hypothetical protein YP_003606971.1 PFAM: cupin; KEGG: bxe:Bxe_B2206 hypothetical protein YP_003606972.1 KEGG: bpy:Bphyt_5969 peptidase M23; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003606973.1 KEGG: bpy:Bphyt_5968 threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003606974.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2203 major facilitator superfamily multidrug efflux transporter YP_003606975.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; KEGG: bpy:Bphyt_5966 glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_003606976.1 KEGG: bxe:Bxe_B2198 hypothetical protein YP_003606977.1 KEGG: cvi:CV_1105 sodium/glutamate symport carrier protein; TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter YP_003606978.1 KEGG: bpy:Bphyt_6184 methyltransferase; TIGRFAM: methyltransferase; PFAM: O-methyltransferase domain protein YP_003606979.1 KEGG: bpy:Bphyt_7177 hypothetical protein YP_003606980.1 KEGG: bph:Bphy_3935 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003606981.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_2983 acyl-CoA dehydrogenase domain protein YP_003606982.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0998 electron transfer flavoprotein subunit beta YP_003606983.1 PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0999 electron transfer flavoprotein subunit alpha YP_003606984.1 PFAM: MaoC domain protein dehydratase; KEGG: bph:Bphy_6753 dehydratase YP_003606985.1 KEGG: bph:Bphy_6754 poly(R)-hydroxyalkanoic acid synthase, class I; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold YP_003606986.1 SMART: Helix-turn-helix, AraC domain; KEGG: rme:Rmet_1715 AraC family transcriptional regulator YP_003606987.1 PFAM: protein of unknown function DUF849; KEGG: bph:Bphy_6358 hypothetical protein YP_003606988.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_6357 major facilitator transporter YP_003606989.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: reu:Reut_A2148 zinc-containing alcohol dehydrogenase superfamily protein YP_003606990.1 KEGG: bph:Bphy_7176 taurine dioxygenase; PFAM: taurine catabolism dioxygenase TauD/TfdA YP_003606991.1 PFAM: protein of unknown function DUF1234; KEGG: rme:Rmet_1734 hypothetical protein YP_003606992.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bph:Bphy_7180 Rieske (2Fe-2S) domain-containing protein YP_003606993.1 PFAM: AMP-dependent synthetase and ligase; KEGG: lch:Lcho_2171 AMP-dependent synthetase and ligase YP_003606994.1 PFAM: porin Gram-negative type; KEGG: bcj:BCAL1734 porin protein YP_003606995.1 KEGG: bph:Bphy_6356 transport-associated; PFAM: transport-associated; SMART: transport-associated and nodulation region YP_003606996.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hoh:Hoch_2580 glyoxalase/bleomycin resistance protein/dioxygenase YP_003606997.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bph:Bphy_7225 protein of unknown function DUF899 thioredoxin family protein YP_003606998.1 PFAM: hypothetical protein; KEGG: bph:Bphy_5617 abortive infection protein YP_003606999.1 PFAM: Domain of unknown function DUF1801; KEGG: bpy:Bphyt_7189 domain of unknown function DUF1801 YP_003607000.1 KEGG: bph:Bphy_6714 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003607001.1 PFAM: beta-lactamase; KEGG: bph:Bphy_1161 beta-lactamase YP_003607002.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_1160 major facilitator transporter YP_003607003.1 PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B2192 OmpC family outer membrane porin YP_003607004.1 PFAM: succinylglutamate desuccinylase/aspartoacylase; KEGG: bpy:Bphyt_5954 succinylglutamate desuccinylase/aspartoacylase YP_003607005.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bpy:Bphyt_5953 cationic amino acid ABC transporter periplasmic binding protein; SMART: extracellular solute-binding protein family 3 YP_003607006.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_5951 extracellular solute-binding protein family 1 YP_003607007.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bpy:Bphyt_5950 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003607008.1 KEGG: bxe:Bxe_B2185 phosphonate metabolism protein PhnM; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase YP_003607009.1 TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter; KEGG: bpy:Bphyt_5945 phosphonate C-P lyase system protein PhnL; SMART: ATPase AAA YP_003607010.1 TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; KEGG: bpy:Bphyt_5944 phosphonate C-P lyase system protein PhnK; SMART: ATPase AAA YP_003607011.1 PFAM: phosphonate metabolism PhnJ; KEGG: bxe:Bxe_B2182 phosphonate metabolism PhnJ protein YP_003607012.1 PFAM: phosphonate metabolism; KEGG: bpy:Bphyt_5942 phosphonate metabolism YP_003607013.1 KEGG: bxe:Bxe_B2180 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism YP_003607014.1 KEGG: bxe:Bxe_B2179 phosphonate metabolism protein PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG YP_003607015.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: bxe:Bxe_B2178 GntR family transcriptional regulator; SMART: regulatory protein GntR HTH YP_003607016.1 KEGG: bxe:Bxe_B2177 hypothetical protein; TIGRFAM: phosphonate metabolism protein; PFAM: protein of unknown function DUF1045 YP_003607017.1 KEGG: bpy:Bphyt_5937 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region YP_003607018.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5936 LysR family transcriptional regulator YP_003607019.1 TIGRFAM: amidohydrolase; KEGG: bpy:Bphyt_5935 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003607020.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: transcriptional regulator IclR ; regulatory protein IclR; KEGG: bxe:Bxe_B2174 IclR family transcriptional regulator; SMART: regulatory protein IclR YP_003607021.1 KEGG: bpy:Bphyt_5932 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003607022.1 KEGG: bpy:Bphyt_5931 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_003607023.1 PFAM: type III effector Hrp-dependent outers; KEGG: bpy:Bphyt_5930 type III effector Hrp-dependent outers YP_003607024.1 PFAM: class II aldolase/adducin family protein; KEGG: bpy:Bphyt_5929 aldolase YP_003607025.1 KEGG: bxe:Bxe_B2169 hydroxypyruvate isomerase; PFAM: xylose isomerase YP_003607026.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_5926 NAD-dependent epimerase/dehydratase YP_003607027.1 KEGG: bpy:Bphyt_5925 beta-ketoadipyl CoA thiolase; TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase YP_003607028.1 KEGG: bbr:BB0022 metal transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003607029.1 PFAM: protein of unknown function DUF156; KEGG: bbr:BB0023 hypothetical protein YP_003607030.1 KEGG: bpy:Bphyt_5924 hypothetical protein YP_003607031.1 KEGG: bpy:Bphyt_5916 hypothetical protein YP_003607032.1 KEGG: bxe:Bxe_B2114 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003607033.1 manually curated; PFAM: response regulator receiver; KEGG: bpy:Bphyt_5913 response regulator receiver protein; SMART: response regulator receiver YP_003607034.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5912 LysR family transcriptional regulator YP_003607035.1 PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B2112 oxidoreductase YP_003607036.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B2111 LysR family transcriptional regulator YP_003607037.1 KEGG: bxe:Bxe_B2110 NAD(P)H dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone) YP_003607038.1 PFAM: esterase; KEGG: bxe:Bxe_B2109 esterase YP_003607039.1 TIGRFAM: aspartate carbamoyltransferase; KEGG: bxe:Bxe_B2108 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003607040.1 KEGG: bxe:Bxe_B2107 dihydrodipicolinate synthase family protein; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003607041.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; KEGG: bpy:Bphyt_5894 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_003607042.1 KEGG: bam:Bamb_4349 rhodanese domain-containing protein; PFAM: rhodanese; SMART: rhodanese YP_003607043.1 KEGG: bpy:Bphyt_5890 transcriptional activator FtrA; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003607044.1 KEGG: psa:PST_0927 acyltransferase YP_003607045.1 PFAM: protein of unknown function DUF2252; KEGG: bpy:Bphyt_5889 hypothetical protein YP_003607046.1 KEGG: bay:RBAM_007730 YflS; TIGRFAM: anion transporter; PFAM: sodium/sulfate symporter YP_003607047.1 PFAM: lactate/malate dehydrogenase; KEGG: geo:Geob_0424 L-lactate dehydrogenase YP_003607048.1 KEGG: bxe:Bxe_B2092 hypothetical protein YP_003607049.1 KEGG: bgl:bglu_2g05060 transcriptional regulator, AraC family protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003607050.1 PFAM: protein of unknown function DUF1479; KEGG: bpy:Bphyt_0861 protein of unknown function DUF1479 YP_003607051.1 KEGG: YALI0B18216p YP_003607052.1 KEGG: ypb:YPTS_1942 hypothetical protein YP_003607053.1 manually curated; KEGG: bpy:Bphyt_0371 hypothetical protein YP_003607054.1 KEGG: bpy:Bphyt_0372 hypothetical protein YP_003607055.1 KEGG: ctu:Ctu_08770 hypothetical protein YP_003607056.1 TIGRFAM: beta-galactosidase; KEGG: bpy:Bphyt_5888 beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_003607057.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_5887 extracellular solute-binding protein family 1 YP_003607058.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_5886 binding-protein-dependent transport systems inner membrane component YP_003607059.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_B2081 ABC sugar transporter inner membrane subunit YP_003607060.1 KEGG: bpy:Bphyt_5884 ABC transporter; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003607061.1 KEGG: bpy:Bphyt_5883 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003607062.1 PFAM: sulfate transporter; sulfate transporter/antisigma-factor antagonist STAS; KEGG: bpy:Bphyt_5881 sulfate transporter YP_003607063.1 KEGG: bpy:Bphyt_6062 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003607064.1 KEGG: aav:Aave_3828 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003607065.1 KEGG: C1orf102; chromosome 1 open reading frame 102 YP_003607066.1 KEGG: ter:Tery_4990 radical SAM family protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003607067.1 KEGG: bph:Bphy_6546 hypothetical protein YP_003607068.1 KEGG: rso:RSp0886 glutamine synthetase protein; TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase; glutamine synthetase beta-Grasp YP_003607069.1 KEGG: kpu:KP1_2563 tartrate:succinate antiporter; TIGRFAM: anion transporter; PFAM: sodium/sulfate symporter YP_003607070.1 PFAM: ferredoxin; KEGG: reu:Reut_B4590 ferredoxin:4Fe-4S ferredoxin iron-sulfur binding YP_003607071.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: rme:Rmet_4301 fumarate reductase/succinate dehydrogenase flavoprotein YP_003607072.1 KEGG: rme:Rmet_4300 respiratory-chain NADH dehydrogenase domain-containing protein; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_003607073.1 PFAM: citrate transporter; TrkA-C domain protein; KEGG: smd:Smed_5235 citrate transporter YP_003607074.1 TIGRFAM: gamma-glutamyltransferase; KEGG: bbr:BB0978 gamma-glutamyltranspeptidase precursor; PFAM: gamma-glutamyltranspeptidase YP_003607075.1 KEGG: nml:Namu_0603 drug resistance transporter EmrB/QacA subfamily YP_003607076.1 PFAM: L-lactate permease; KEGG: bbr:BB0976 lactate permease family protein YP_003607077.1 KEGG: bpy:Bphyt_5880 hypothetical protein YP_003607078.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bxe:Bxe_B2075 amino acid efflux pump, RhtB family protein YP_003607079.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5878 LysR family transcriptional regulator YP_003607080.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpy:Bphyt_5877 glyoxalase/bleomycin resistance protein/dioxygenase YP_003607081.1 PFAM: acriflavin resistance protein; KEGG: bpy:Bphyt_5876 acriflavin resistance protein YP_003607082.1 KEGG: bpy:Bphyt_5875 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003607083.1 KEGG: bpy:Bphyt_5874 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003607084.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator; KEGG: bpy:Bphyt_5873 two component heavy metal response transcriptional regulator, winged helix family; SMART: response regulator receiver YP_003607085.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bpy:Bphyt_5872 heavy metal sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003607086.1 KEGG: bxe:Bxe_B2067 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_003607087.1 KEGG: rme:Rmet_1090 EAL-containing signal transduction protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_003607088.1 PFAM: YceI family protein; KEGG: bpy:Bphyt_5860 YceI family protein YP_003607089.1 PFAM: YceI family protein; KEGG: bxe:Bxe_B2065 hypothetical protein YP_003607090.1 PFAM: cytochrome B561; KEGG: bpy:Bphyt_5858 cytochrome b561 YP_003607091.1 PFAM: citrate transporter; KEGG: bpy:Bphyt_5856 arsenical pump membrane protein YP_003607092.1 KEGG: bpy:Bphyt_5855 hypothetical protein YP_003607093.1 KEGG: bpy:Bphyt_5854 hypothetical protein YP_003607094.1 KEGG: bpy:Bphyt_5853 hypothetical protein YP_003607095.1 KEGG: bpy:Bphyt_5849 transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003607096.1 KEGG: bpy:Bphyt_5848 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_003607097.1 KEGG: bxe:Bxe_B2057 hypothetical protein YP_003607098.1 KEGG: bpy:Bphyt_5541 insertion element transposase YP_003607099.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bpy:Bphyt_5841 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver YP_003607100.1 PFAM: cellulose synthase operon C domain protein; TPR repeat-containing protein; hypothetical protein; KEGG: bxe:Bxe_B2043 cellulose synthase operon protein C YP_003607101.1 KEGG: bxe:Bxe_B2042 endo-1,4-D-glucanase; PFAM: glycoside hydrolase family 8 YP_003607102.1 PFAM: cellulose synthase BcsB; KEGG: bxe:Bxe_B2041 cellulose synthase regulator protein YP_003607103.1 KEGG: bpy:Bphyt_5836 cellulose synthase catalytic subunit (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_003607104.1 KEGG: bpy:Bphyt_5835 cellulose synthase operon protein YhjQ; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: cobyrinic acid ac-diamide synthase YP_003607105.1 KEGG: bxe:Bxe_B2038 hypothetical protein YP_003607106.1 KEGG: bxe:Bxe_B2037 hypothetical protein YP_003607107.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bpy:Bphyt_5832 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003607108.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bxe:Bxe_B2035 diguanylate cyclase/phosphodiesterase; SMART: GGDEF domain containing protein; EAL domain protein YP_003607109.1 TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: bpy:Bphyt_5830 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase YP_003607110.1 TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: bxe:Bxe_B2033 2-oxo-hept-3-ene-1,7-dioate hydratase(HpaH); PFAM: fumarylacetoacetate hydrolase YP_003607111.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bpy:Bphyt_5828 5-carboxymethyl-2-hydroxymuconate isomerase YP_003607112.1 TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; KEGG: bpy:Bphyt_5827 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B YP_003607113.1 TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; KEGG: bpy:Bphyt_5826 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003607114.1 TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; KEGG: bpy:Bphyt_5825 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate hydrolase YP_003607115.1 KEGG: bxe:Bxe_B2028 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxylase/isomerase (HpaG); PFAM: fumarylacetoacetate hydrolase YP_003607116.1 TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bxe:Bxe_B2027 MarR family transcriptional regulator; SMART: regulatory protein MarR YP_003607117.1 PFAM: alanine racemase domain protein; KEGG: bxe:Bxe_B2026 metal-activated pyridoxal protein YP_003607118.1 KEGG: bpy:Bphyt_5821 HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: haloacid dehalogenase YP_003607119.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B2024 LysR family transcriptional regulator YP_003607120.1 KEGG: bpy:Bphyt_5819 hypothetical protein YP_003607121.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: bpy:Bphyt_5818 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_003607122.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bpy:Bphyt_5817 oxidoreductase domain protein YP_003607123.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_5816 major facilitator superfamily MFS_1 YP_003607124.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5815 LysR family transcriptional regulator YP_003607125.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2022 major facilitator superfamily multidrug efflux transporter YP_003607126.1 PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_B2021 isochorismatase hydrolase YP_003607127.1 KEGG: bxe:Bxe_B2020 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003607128.1 PFAM: SNARE associated Golgi protein; KEGG: bpy:Bphyt_5807 SNARE associated Golgi protein YP_003607129.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpy:Bphyt_5806 GCN5-related N-acetyltransferase YP_003607130.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bpy:Bphyt_5805 NADH:flavin oxidoreductase/NADH oxidase YP_003607131.1 KEGG: bxe:Bxe_B2017 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003607132.1 KEGG: bcj:BCAM0227 hybrid two-component system kinase-response regulator protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003607133.1 KEGG: bbr:BB0725 transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003607134.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:blr0938 dioxygenase YP_003607135.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pde:Pden_0192 short-chain dehydrogenase/reductase SDR YP_003607136.1 KEGG: bac:BamMC406_5125 ferredoxin; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein YP_003607137.1 PFAM: major facilitator superfamily MFS_1; KEGG: vpr:Vpar_1674 major facilitator superfamily MFS_1 YP_003607138.1 PFAM: porin Gram-negative type; KEGG: rme:Rmet_4239 porin YP_003607139.1 KEGG: bxe:Bxe_B2006 periplasmic sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator receiver YP_003607140.1 KEGG: bpy:Bphyt_4755 hypothetical protein YP_003607141.1 PFAM: phospholipase A1; KEGG: bxe:Bxe_C1069 phospholipase YP_003607142.1 PFAM: phosphoesterase PA-phosphatase related; SNARE associated Golgi protein; KEGG: bxe:Bxe_B2003 hypothetical protein YP_003607143.1 KEGG: bxe:Bxe_B2002 hypothetical protein YP_003607144.1 PFAM: OsmC family protein; KEGG: bpy:Bphyt_4769 OsmC family protein YP_003607145.1 KEGG: bpy:Bphyt_4772 hypothetical protein YP_003607146.1 KEGG: bpy:Bphyt_4773 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003607147.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bpy:Bphyt_4774 lysine exporter protein (LysE/YggA) YP_003607148.1 PFAM: protein of unknown function DUF1289; KEGG: bpy:Bphyt_4775 protein of unknown function DUF1289 YP_003607149.1 PFAM: protein of unknown function UPF0060; KEGG: bpy:Bphyt_4776 protein of unknown function UPF0060 YP_003607150.1 PFAM: Domain of unknown function DUF1993; KEGG: bpy:Bphyt_4777 hypothetical protein YP_003607151.1 PFAM: peptidase S53 propeptide; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bpy:Bphyt_4778 peptidase S53 propeptide YP_003607152.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bxe:Bxe_B1993 carboxypeptidase YP_003607153.1 KEGG: bpy:Bphyt_4780 hypothetical protein YP_003607154.1 KEGG: bpy:Bphyt_4781 hypothetical protein YP_003607155.1 KEGG: bpy:Bphyt_4783 hypothetical protein YP_003607156.1 KEGG: bpy:Bphyt_4784 NAD synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase YP_003607157.1 KEGG: bxe:Bxe_B1988 hypothetical protein YP_003607158.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bpy:Bphyt_4786 protein of unknown function DUF6 transmembrane YP_003607159.1 PFAM: ABC transporter; KEGG: bpy:Bphyt_4787 ABC-1 domain protein YP_003607160.1 KEGG: bxe:Bxe_B1877 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003607161.1 KEGG: bxe:Bxe_B1875 ABC transporter periplasmic ligand binding protein; TIGRFAM: 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein; PFAM: extracellular solute-binding protein family 1 YP_003607162.1 TIGRFAM: 2-aminoethylphosphonate ABC transporter, ATP-binding component PhnT; PFAM: ABC transporter; transport-associated OB domain protein; KEGG: bpy:Bphyt_4790 2-aminoethylphosphonate ABC transporter, ATP-binding component PhnT; SMART: ATPase AAA YP_003607163.1 KEGG: bpy:Bphyt_4791 2-aminoethylphosphonate ABC transporter permease; TIGRFAM: 2-aminoethylphosphonate ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component YP_003607164.1 KEGG: bpy:Bphyt_4792 2-aminoethylphosphonate ABC transporter, membrane component PhnV; TIGRFAM: 2-aminoethylphosphonate ABC transporter, membrane component PhnV; PFAM: binding-protein-dependent transporters inner membrane component YP_003607165.1 TIGRFAM: phosphonate utilization associated transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; KEGG: bpy:Bphyt_4793 GntR family transcriptional regulator; SMART: regulatory protein GntR HTH YP_003607166.1 KEGG: bpy:Bphyt_4794 phosphonoacetate hydrolase; TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase YP_003607167.1 KEGG: bpy:Bphyt_4795 phosphonoacetaldehyde dehydrogenase; TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003607168.1 TIGRFAM: phosphonate degradation operons associated HDIG domain protein; KEGG: bpy:Bphyt_4796 hypothetical protein YP_003607169.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B1864 LysR family transcriptional regulator YP_003607170.1 PFAM: fusaric acid resistance protein conserved region; KEGG: bpy:Bphyt_4798 fusaric acid resistance protein conserved region YP_003607171.1 KEGG: bpy:Bphyt_4799 hypothetical protein YP_003607172.1 TIGRFAM: succinate CoA transferase; KEGG: bxe:Bxe_B1860 acetyl-CoA hydrolase; PFAM: acetyl-CoA hydrolase/transferase YP_003607173.1 PFAM: transglycosylase; KEGG: bpy:Bphyt_4801 transglycosylase YP_003607174.1 PFAM: metallophosphoesterase; KEGG: bpy:Bphyt_4804 metallophosphoesterase YP_003607175.1 KEGG: bxe:Bxe_B1854 hypothetical protein YP_003607176.1 PFAM: nitroreductase; KEGG: bpy:Bphyt_4806 hypothetical protein YP_003607177.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bpy:Bphyt_4807 2OG-Fe(II) oxygenase YP_003607178.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_4808 periplasmic binding protein/LacI transcriptional regulator YP_003607179.1 KEGG: bpy:Bphyt_4809 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003607180.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_4810 monosaccharide-transporting ATPase YP_003607181.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_4811 inner membrane ABC transporter permease YjfF YP_003607182.1 PFAM: protein of unknown function DUF344; KEGG: rme:Rmet_5397 polyphosphate:AMP phosphotransferase YP_003607183.1 KEGG: rme:Rmet_5396 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase YP_003607184.1 PFAM: methyltransferase type 11; KEGG: rce:RC1_2160 hypothetical protein YP_003607185.1 PFAM: acyl transferase; KEGG: bxe:Bxe_B1850 acyl transferase YP_003607186.1 KEGG: bxe:Bxe_B1849 phosphoribosyl-dephospho-CoA transferase; TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; PFAM: Holo-ACP synthase, malonate decarboxylase-specific YP_003607187.1 KEGG: bpy:Bphyt_4817 malonate decarboxylase, gamma subunit; TIGRFAM: malonate decarboxylase, subunit gamma; PFAM: malonate decarboxylase subunit gamma YP_003607188.1 TIGRFAM: malonate decarboxylase subunit beta; KEGG: bpy:Bphyt_4818 malonate decarboxylase subunit beta YP_003607189.1 KEGG: bxe:Bxe_B1846 malonate decarboxylase subunit delta; TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase subunit delta YP_003607190.1 TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; KEGG: bpy:Bphyt_4820 triphosphoribosyl-dephospho-CoA synthase; PFAM: triphosphoribosyl-dephospho-CoA protein YP_003607191.1 TIGRFAM: malonate decarboxylase, subunit alpha; KEGG: bpy:Bphyt_4821 malonate decarboxylase, subunit alpha YP_003607192.1 KEGG: bpy:Bphyt_4822 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003607193.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1842 major facilitator superfamily transporter metabolite/H(+) symporter YP_003607194.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bpy:Bphyt_4824 protein of unknown function DUF6 transmembrane YP_003607195.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B1838 LysR family transcriptional regulator YP_003607196.1 KEGG: bpy:Bphyt_4826 ABC transporter YP_003607197.1 PFAM: carbohydrate-selective porin OprB; KEGG: bpy:Bphyt_4831 carbohydrate-selective porin OprB YP_003607198.1 KEGG: bxe:Bxe_B1831 hypothetical protein YP_003607199.1 KEGG: bxe:Bxe_B1830 N-hydroxyarylamine O-acetyltransferase; PFAM: N-acetyltransferase YP_003607200.1 PFAM: isoprenylcysteine carboxyl methyltransferase; KEGG: bpy:Bphyt_4833 isoprenylcysteine carboxyl methyltransferase YP_003607201.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: bpy:Bphyt_4839 transcriptional regulator, histidine utilization repressor, GntR family; SMART: regulatory protein GntR HTH YP_003607202.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: bpy:Bphyt_4840 transcriptional regulator, histidine utilization repressor, GntR family; SMART: regulatory protein GntR HTH YP_003607203.1 KEGG: bpy:Bphyt_4841 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003607204.1 KEGG: bxe:Bxe_B1821 ABC amino acid transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003607205.1 KEGG: bpy:Bphyt_4843 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003607206.1 KEGG: bpy:Bphyt_4844 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003607207.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B1818 oxidoreductase YP_003607208.1 PFAM: FAD linked oxidase; KEGG: bxe:Bxe_B1817 oxidoreductase YP_003607209.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_B1816 hypothetical protein YP_003607210.1 KEGG: bxe:Bxe_B1815 hypothetical protein YP_003607211.1 KEGG: bxe:Bxe_B1814 periplasmic sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003607212.1 KEGG: bpy:Bphyt_4850 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_003607213.1 KEGG: bpy:Bphyt_4851 hypothetical protein YP_003607214.1 KEGG: bxe:Bxe_B1811 cytochrome bd ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_003607215.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bpy:Bphyt_4853 cytochrome bd ubiquinol oxidase subunit I YP_003607216.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_4854 alpha/beta hydrolase fold YP_003607217.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_4856 NAD-dependent epimerase/dehydratase YP_003607218.1 KEGG: sde:Sde_0047 response regulator receiver domain-containing protein YP_003607219.1 KEGG: aav:Aave_1350 hypothetical protein YP_003607220.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: bpy:Bphyt_4859 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_003607221.1 TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase; KEGG: bpy:Bphyt_4860 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase YP_003607222.1 PFAM: aldehyde dehydrogenase; KEGG: bxe:Bxe_B1805 fatty aldehyde dehydrogenase YP_003607223.1 KEGG: bpy:Bphyt_4862 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003607224.1 KEGG: bxe:Bxe_B1803 major facilitator superfamily D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_003607225.1 KEGG: bpy:Bphyt_4864 5-dehydro-4-deoxyglucarate dehydratase; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase YP_003607226.1 TIGRFAM: galactarate dehydratase; KEGG: bpy:Bphyt_4865 galactarate dehydratase; PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein YP_003607227.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_4866 NAD-dependent epimerase/dehydratase YP_003607228.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: bpy:Bphyt_4867 SMP-30/gluconolaconase/LRE domain protein YP_003607229.1 KEGG: bxe:Bxe_B1798 TRAP dicarboxylate transporter DctP subunit; TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: extracellular solute-binding protein, family 7 YP_003607230.1 PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bpy:Bphyt_4869 tripartite ATP-independent periplasmic transporter DctQ component YP_003607231.1 KEGG: bxe:Bxe_B1796 TRAP C4-dicarboxylate transporter DctM subunit; TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit YP_003607232.1 PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_4871 porin gram-negative type YP_003607233.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bpy:Bphyt_4872 4-oxalocrotonate tautomerase YP_003607234.1 manually curated; KEGG: bpt:Bpet0206 hypothetical protein YP_003607235.1 PFAM: protein of unknown function DUF1311; KEGG: bam:Bamb_5702 hypothetical protein YP_003607237.1 PFAM: Urea transporter; KEGG: bxe:Bxe_B1794 UreA transporter YP_003607238.1 PFAM: protein of unknown function DUF1089; KEGG: bpy:Bphyt_4875 protein of unknown function DUF1089 YP_003607239.1 KEGG: bxe:Bxe_B1787 phosphinothricin N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003607240.1 KEGG: bpy:Bphyt_4885 transcriptional regulator, RpiR family YP_003607241.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bpy:Bphyt_4886 protein of unknown function DUF6 transmembrane YP_003607242.1 KEGG: bam:Bamb_4265 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003607243.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bxe:Bxe_B1781 hypothetical protein YP_003607244.1 KEGG: bxe:Bxe_B1780 hypothetical protein YP_003607245.1 KEGG: bxe:Bxe_B1779 major facilitator superfamily multidrug efflux transporter; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003607246.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_4891 TetR family transcriptional regulator YP_003607247.1 PFAM: dimethylmenaquinone methyltransferase; KEGG: bpy:Bphyt_4892 hypothetical protein YP_003607248.1 KEGG: bpy:Bphyt_4893 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003607249.1 PFAM: ferric-uptake regulator; KEGG: bpy:Bphyt_4894 ferric uptake regulator, Fur family YP_003607250.1 PFAM: glutathione S-transferase domain; KEGG: bpy:Bphyt_4895 glutathione S-transferase domain YP_003607251.1 PFAM: NERD domain protein; KEGG: bpy:Bphyt_4896 NERD domain protein YP_003607252.1 PFAM: phosphoribosyltransferase; KEGG: bxe:Bxe_B1773 hypothetical protein YP_003607253.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bpy:Bphyt_4898 hypothetical protein YP_003607254.1 KEGG: bxe:Bxe_B1771 periplasmic sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003607255.1 PFAM: BetR domain protein; response regulator receiver; KEGG: bpy:Bphyt_4900 response regulator receiver protein YP_003607256.1 KEGG: bpy:Bphyt_4901 HipA N-terminal domain protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein YP_003607257.1 KEGG: bpy:Bphyt_4902 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003607258.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_4903 FAD dependent oxidoreductase YP_003607259.1 KEGG: bpy:Bphyt_4904 hypothetical protein YP_003607260.1 KEGG: bpy:Bphyt_4905 hypothetical protein YP_003607261.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bxe:Bxe_B1765 ornithine cyclodeaminase/Mu-crystallin family protein YP_003607262.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: bxe:Bxe_B1764 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003607263.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: bpy:Bphyt_4926 inosine/uridine-preferring nucleoside hydrolase YP_003607264.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B1755 LysR family transcriptional regulator YP_003607265.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: bxe:Bxe_B1754 zinc-containing alcohol dehydrogenase superfamily protein YP_003607266.1 KEGG: bpy:Bphyt_4929 transcriptional regulator, AraC family; PFAM: AraC-type transcriptional regulator; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003607267.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bxe:Bxe_B1752 oxidoreductase, molybdopterin-binding protein YP_003607268.1 KEGG: bxe:Bxe_B1751 hypothetical protein YP_003607269.1 KEGG: bxe:Bxe_B1750 hypothetical protein YP_003607270.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator; KEGG: bxe:Bxe_B1748a hypothetical protein; SMART: response regulator receiver YP_003607271.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bxe:Bxe_B1748 heavy metal sensor signal transduction histidine kinases (STHK); SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003607272.1 KEGG: bpy:Bphyt_4937 hypothetical protein YP_003607273.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bpy:Bphyt_4938 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003607274.1 KEGG: reu:Reut_B3533 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003607275.1 PFAM: sodium:dicarboxylate symporter; KEGG: bam:Bamb_5393 sodium:dicarboxylate symporter YP_003607276.1 PFAM: malate/L-lactate dehydrogenase; KEGG: bpt:Bpet0408 malate/L-lactate dehydrogenase YP_003607277.1 KEGG: hypothetical protein YP_003607278.1 KEGG: rha:RHA1_ro02708 long-chain-fatty-acid--CoA ligase YP_003607279.1 KEGG: bpy:Bphyt_4943 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit YP_003607280.1 KEGG: bxe:Bxe_B1703 hypothetical protein YP_003607281.1 PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_B1702 hypothetical protein YP_003607282.1 PFAM: esterase; KEGG: bpy:Bphyt_4946 esterase YP_003607283.1 PFAM: conserved hypothetical protein; KEGG: bxe:Bxe_B1700 hypothetical protein YP_003607284.1 PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_4948 porin gram-negative type YP_003607285.1 KEGG: bpy:Bphyt_4956 peptidase M23; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_003607286.1 KEGG: bpy:Bphyt_4958 hypothetical protein YP_003607287.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_B1691 oxidoreductase subunit alpha YP_003607288.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bpy:Bphyt_4960 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_003607289.1 KEGG: bpy:Bphyt_4961 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome C class I YP_003607290.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_4798 short chain dehydrogenase YP_003607291.1 KEGG: bpy:Bphyt_4141 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_003607292.1 KEGG: bpy:Bphyt_4141 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_003607293.1 KEGG: bpy:Bphyt_4140 hypothetical protein YP_003607294.1 KEGG: bpy:Bphyt_4137 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003607295.1 PFAM: helix-turn-helix HxlR type; KEGG: rlt:Rleg2_5189 HxlR family transcriptional regulator YP_003607296.1 KEGG: bxe:Bxe_B1688 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003607297.1 KEGG: bxe:Bxe_B1687 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003607298.1 KEGG: bxe:Bxe_B1686 ABC amino acid transporter periplasmic ligand binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003607299.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; KEGG: bpy:Bphyt_4965 ABC transporter; SMART: ATPase AAA YP_003607300.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_B1684 ABC spermidine/putrescine transporter inner membrane subunit YP_003607301.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_4967 binding-protein-dependent transport systems inner membrane component YP_003607302.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_4968 extracellular solute-binding protein family 1 YP_003607303.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_4969 LysR family transcriptional regulator YP_003607304.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bxe:Bxe_B1680 Ca2+/H+ antiporter YP_003607305.1 PFAM: transport-associated; KEGG: bxe:Bxe_B1679 transporter YP_003607306.1 KEGG: bpy:Bphyt_4972 DNA-3-methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG) YP_003607307.1 KEGG: bxe:Bxe_B1677 hypothetical protein YP_003607308.1 KEGG: bpy:Bphyt_4974 signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_003607309.1 TIGRFAM: GTP cyclohydrolase II; KEGG: bxe:Bxe_B1675 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II YP_003607310.1 KEGG: bpy:Bphyt_4976 hypothetical protein YP_003607311.1 PFAM: NmrA family protein; KEGG: bxe:Bxe_B1674 hypothetical protein YP_003607312.1 KEGG: bpy:Bphyt_4978 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003607313.1 KEGG: bxe:Bxe_B1672 transmembrane transcriptional regulator (anti-sigma factor) YP_003607314.1 KEGG: bxe:Bxe_B1671 sigma-24 (FecI); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003607315.1 KEGG: bxe:Bxe_B1670 transmembrane transcriptional regulator (anti-sigma factor) YP_003607316.1 KEGG: bxe:Bxe_B1669 hypothetical protein YP_003607317.1 PFAM: catalase related subgroup; KEGG: bpy:Bphyt_4983 catalase domain protein YP_003607318.1 PFAM: cytochrome B561; KEGG: bxe:Bxe_B1667 type-b cytochrome YP_003607319.1 KEGG: bxe:Bxe_B1664 helicase; PFAM: SNF2-related protein; zinc finger SWIM domain protein; helicase; SMART: DEAD-like helicase ; helicase YP_003607320.1 manually curated; PFAM: response regulator receiver; transcriptional regulator; KEGG: bpy:Bphyt_4991 transcriptional regulator; SMART: response regulator receiver YP_003607321.1 PFAM: FecR protein; peptidoglycan-binding lysin domain; KEGG: bpy:Bphyt_4992 peptidoglycan-binding LysM YP_003607322.1 KEGG: bpy:Bphyt_4993 integral membrane sensor signal transduction histidine kinase; PFAM: CHASE2 domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003607323.1 KEGG: bxe:Bxe_B1658 lipoprotein YP_003607324.1 KEGG: bpy:Bphyt_4995 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase YP_003607325.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; KEGG: bpy:Bphyt_4996 CobB/CobQ domain protein glutamine amidotransferase YP_003607326.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: bpy:Bphyt_4997 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_003607327.1 KEGG: bpy:Bphyt_4999 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein YP_003607328.1 KEGG: bxe:Bxe_B1647 CobW; TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein YP_003607329.1 TIGRFAM: cobaltochelatase, CobN subunit; KEGG: bpy:Bphyt_5001 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase YP_003607330.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bpy:Bphyt_5002 magnesium chelatase; SMART: ATPase AAA YP_003607331.1 KEGG: bpy:Bphyt_5003 hypothetical protein YP_003607332.1 PFAM: type IV pilus assembly PilZ; KEGG: bpy:Bphyt_5004 type IV pilus assembly PilZ YP_003607333.1 PFAM: protein of unknown function DUF2006; KEGG: bpy:Bphyt_5005 secreted hydrolase-like protein YP_003607334.1 PFAM: protein of unknown function DUF214; KEGG: bxe:Bxe_B1641 ABC liporpotein exporter, fused inner membrane subunits YP_003607335.1 KEGG: bpy:Bphyt_5007 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003607336.1 KEGG: bpy:Bphyt_5008 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003607337.1 KEGG: bpy:Bphyt_5009 ubiquinol oxidase subunit II; TIGRFAM: ubiquinol oxidase subunit II; PFAM: COX aromatic rich domain protein; cytochrome C oxidase subunit II YP_003607338.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit I; KEGG: bxe:Bxe_B1636 cytochrome-c oxidase; PFAM: cytochrome C oxidase subunit I YP_003607339.1 KEGG: bxe:Bxe_B1635 CyoC; TIGRFAM: cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome C oxidase subunit III YP_003607340.1 KEGG: bph:Bphy_3971 cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_003607341.1 PFAM: transposase IS3/IS911 family protein; KEGG: bch:Bcen2424_3311 transposase IS3/IS911 family protein YP_003607342.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bcj:BCAL3246 GDP-mannose pyrophosphorylase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase YP_003607343.1 KEGG: bpy:Bphyt_5015 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase YP_003607344.1 KEGG: bxe:Bxe_B1631 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003607345.1 KEGG: bxe:Bxe_B1630 lipoprotein YP_003607346.1 KEGG: bpy:Bphyt_5020 hypothetical protein YP_003607347.1 KEGG: bxe:Bxe_B1629 sigma-24 (FecI); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003607348.1 KEGG: bpy:Bphyt_5022 hypothetical protein YP_003607349.1 KEGG: bpy:Bphyt_5023 membrane-associated protein YP_003607350.1 PFAM: hypothetical protein; KEGG: bxe:Bxe_B1626 hypothetical protein YP_003607351.1 PFAM: protein of unknown function DUF1501; KEGG: bpy:Bphyt_5025 protein of unknown function DUF1501 YP_003607352.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bpy:Bphyt_5028 flavin reductase domain protein FMN-binding YP_003607353.1 KEGG: bpy:Bphyt_5029 flavin-dependent oxidoreductase YP_003607354.1 KEGG: bpy:Bphyt_5030 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003607355.1 PFAM: transport-associated; KEGG: bpy:Bphyt_5031 transport-associated YP_003607356.1 KEGG: bxe:Bxe_B1622 hypothetical protein YP_003607357.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: bpy:Bphyt_5039 protein of unknown function DUF125 transmembrane YP_003607358.1 KEGG: ank:AnaeK_3271 hypothetical protein YP_003607359.1 TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter; KEGG: bxe:Bxe_B1616 ABC proline/glycine betaine transporter ATPase; SMART: ATPase AAA YP_003607360.1 KEGG: bxe:Bxe_B1615 ABC proline/glycine betaine transporter inner membrane subunit; TIGRFAM: choline ABC transporter permease; PFAM: binding-protein-dependent transporters inner membrane component YP_003607361.1 KEGG: bpy:Bphyt_5042 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003607362.1 KEGG: bpy:Bphyt_5046 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain YP_003607363.1 TIGRFAM: L-serine dehydratase; KEGG: bpy:Bphyt_5047 L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_003607364.1 KEGG: bxe:Bxe_B1600 sarcosine oxidase subunit beta, heterotetrameric; TIGRFAM: sarcosine oxidase subunit beta family; PFAM: FAD dependent oxidoreductase YP_003607365.1 PFAM: Sarcosine oxidase subunit delta heterotetrameric; KEGG: bpy:Bphyt_5049 sarcosine oxidase subunit delta heterotetrameric YP_003607366.1 KEGG: bxe:Bxe_B1598 sarcosine oxidase subunit alpha, heterotetrameric; TIGRFAM: sarcosine oxidase subunit alpha family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD dependent oxidoreductase; glycine cleavage T-protein barrel YP_003607367.1 PFAM: Sarcosine oxidase subunit gamma; KEGG: bpy:Bphyt_5051 sarcosine oxidase subunit gamma YP_003607368.1 KEGG: bxe:Bxe_B1596 hypothetical protein YP_003607369.1 PFAM: beta-lactamase; KEGG: bpy:Bphyt_5057 beta-lactamase YP_003607370.1 KEGG: bxe:Bxe_B1589 glutathione-independent formaldehyde dehydrogenase; TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: alcohol dehydrogenase GroES; alcohol dehydrogenase zinc-binding domain protein YP_003607371.1 KEGG: bpy:Bphyt_5062 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain YP_003607372.1 KEGG: bxe:Bxe_B1585 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_003607373.1 KEGG: bpy:Bphyt_5064 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase YP_003607374.1 PFAM: 4-vinyl reductase 4VR; KEGG: bxe:Bxe_B1583 hypothetical protein YP_003607375.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpy:Bphyt_5066 NADH:flavin oxidoreductase/NADH oxidase YP_003607376.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bpy:Bphyt_5067 protein of unknown function DUF224 cysteine-rich region domain protein YP_003607377.1 PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_B1580 electron transfer flavoprotein alpha-subunit YP_003607378.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: bpy:Bphyt_5069 electron transfer flavoprotein beta-subunit YP_003607379.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bpy:Bphyt_5070 Rieske (2Fe-2S) domain protein YP_003607380.1 PFAM: oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: bpy:Bphyt_5071 oxidoreductase FAD-binding domain protein YP_003607381.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: bpy:Bphyt_5072 substrate-binding region of ABC-type glycine betaine transporter YP_003607382.1 KEGG: bxe:Bxe_B1575 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_003607383.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5078 LysR family transcriptional regulator YP_003607384.1 PFAM: glutathione S-transferase domain; KEGG: bpy:Bphyt_5079 glutathione S-transferase domain YP_003607385.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bpy:Bphyt_5080 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_003607386.1 KEGG: bph:Bphy_3674 hypothetical protein YP_003607387.1 KEGG: bph:Bphy_3675 hypothetical protein YP_003607388.1 KEGG: psa:PST_1763 hypothetical protein YP_003607389.1 PFAM: amino acid permease-associated region; KEGG: bpy:Bphyt_6715 amino acid permease-associated region YP_003607390.1 KEGG: sal:Sala_1448 secretion protein HlyD; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003607391.1 KEGG: sal:Sala_1449 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003607392.1 KEGG: sal:Sala_1450 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003607393.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bxe:Bxe_A0701 serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_003607394.1 KEGG: pol:Bpro_3343 cupin 2, barrel YP_003607395.1 PFAM: major facilitator superfamily MFS_1; KEGG: glucarate, hexuronate transporter YP_003607396.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mno:Mnod_2717 short-chain dehydrogenase/reductase SDR YP_003607397.1 KEGG: pol:Bpro_3341 IclR family transcriptional regulator; PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_003607398.1 KEGG: bpy:Bphyt_5235 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_003607399.1 KEGG: bxe:Bxe_B1357 hypothetical protein YP_003607400.1 PFAM: protein of unknown function DUF480; KEGG: bpy:Bphyt_5265 protein of unknown function DUF480 YP_003607401.1 PFAM: thioesterase superfamily protein; KEGG: bpy:Bphyt_5269 thioesterase superfamily protein YP_003607402.1 KEGG: bpy:Bphyt_5271 transport-associated; PFAM: transport-associated; SMART: transport-associated and nodulation region YP_003607403.1 KEGG: bpy:Bphyt_5272 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_003607404.1 KEGG: bxe:Bxe_B1345 phosphoketolase; PFAM: Xylulose 5-phosphate/fructose 6-phosphate phosphoketolase-like; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YP_003607405.1 KEGG: bpy:Bphyt_5274 hypothetical protein YP_003607406.1 SMART: ankyrin; KEGG: bpy:Bphyt_5275 ankyrin YP_003607407.1 KEGG: bpy:Bphyt_5276 haloacid dehalogenase domain protein hydrolase YP_003607408.1 KEGG: bxe:Bxe_B1341 6-phosphogluconate dehydrogenase-like protein; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein YP_003607409.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_5278 major facilitator superfamily MFS_1 YP_003607410.1 KEGG: bpy:Bphyt_5279 hypothetical protein YP_003607411.1 PFAM: protein of unknown function DUF2506; KEGG: bpy:Bphyt_5280 hypothetical protein YP_003607412.1 KEGG: bxe:Bxe_B1336 thioredoxin YP_003607413.1 PFAM: protein of unknown function UPF0047; KEGG: bxe:Bxe_B1335 hypothetical protein YP_003607414.1 KEGG: bxe:Bxe_B1334 fructose-bisphosphate aldolase; PFAM: fructose-bisphosphate aldolase class-I YP_003607415.1 KEGG: bxe:Bxe_B1331 hypothetical protein YP_003607416.1 KEGG: bxe:Bxe_B1330 periplasmic sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003607417.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: bpy:Bphyt_5285 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003607418.1 KEGG: bpy:Bphyt_5286 hypothetical protein YP_003607419.1 PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_B1324 membrane transporter YP_003607420.1 KEGG: bpy:Bphyt_5288 hypothetical protein YP_003607421.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase; KEGG: bpy:Bphyt_5289 glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain YP_003607422.1 PFAM: PRC-barrel domain protein; KEGG: bpy:Bphyt_5290 PRC-barrel domain protein YP_003607423.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bxe:Bxe_B1320 xanthine dehydrogenase, molybdenum binding subunit apoprotein YP_003607424.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_B1319 oxidoreductase YP_003607425.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_B1318 2Fe-2S iron-sulfur cluster binding protein YP_003607426.1 KEGG: rer:RER_06810 hypothetical protein YP_003607427.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1317 short-chain dehydrogenase YP_003607428.1 KEGG: bpy:Bphyt_5291 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003607429.1 PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: bxe:Bxe_B1315 ATP-dependent DNA ligase YP_003607430.1 KEGG: bxe:Bxe_B1314 exonuclease involved in mRNA processing YP_003607431.1 KEGG: bxe:Bxe_B1313 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_003607432.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bpy:Bphyt_2032 thiamine pyrophosphate protein YP_003607433.1 PFAM: AFG1-family ATPase; KEGG: bpy:Bphyt_5297 AFG1-family ATPase YP_003607434.1 KEGG: bpy:Bphyt_5298 hypothetical protein YP_003607435.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sus:acid_6266 hypothetical protein YP_003607436.1 KEGG: bxe:Bxe_B2698 hypothetical protein YP_003607437.1 PFAM: PEBP family protein; KEGG: cts:Ctha_0072 PEBP family protein YP_003607438.1 manually curated; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; KEGG: bch:Bcen2424_6376 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain YP_003607439.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_5725 short chain dehydrogenase YP_003607440.1 PFAM: cupin; KEGG: bja:bll6529 hypothetical protein YP_003607441.1 KEGG: bpy:Bphyt_5119 alkyl hydroperoxide reductase subunit; PFAM: glutaredoxin YP_003607442.1 PFAM: UspA domain protein; KEGG: bph:Bphy_6247 UspA domain-containing protein YP_003607443.1 PFAM: ferritin; KEGG: bpy:Bphyt_5727 ferritin Dps family protein YP_003607444.1 KEGG: bpy:Bphyt_5299 transketolase; TIGRFAM: transketolase; PFAM: transketolase; transketolase central region YP_003607445.1 PFAM: cupin; KEGG: bxe:Bxe_B1308 hypothetical protein YP_003607446.1 KEGG: bph:Bphy_6397 hypothetical protein YP_003607447.1 KEGG: bpy:Bphyt_5302 hypothetical protein YP_003607448.1 KEGG: bpy:Bphyt_5303 hypothetical protein YP_003607449.1 KEGG: bxe:Bxe_B1305 hypothetical protein YP_003607450.1 KEGG: bpy:Bphyt_5305 hypothetical protein YP_003607451.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bpy:Bphyt_5311 multiple antibiotic resistance (MarC)-related protein YP_003607452.1 KEGG: bpy:Bphyt_5312 hypothetical protein YP_003607453.1 PFAM: Na+/solute symporter; KEGG: bxe:Bxe_B1295 SSS family Na(+)/monocarboxylate symporter YP_003607454.1 PFAM: glutathione S-transferase domain; KEGG: bpy:Bphyt_5316 glutathione S-transferase domain YP_003607455.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bpy:Bphyt_5319 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003607456.1 KEGG: bpy:Bphyt_5320 hypothetical protein YP_003607457.1 KEGG: sth:STH498 hypothetical protein YP_003607458.1 PFAM: blue (type 1) copper domain protein; KEGG: bpy:Bphyt_5325 blue (type 1) copper domain protein YP_003607459.1 PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B1271 hypothetical protein YP_003607460.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_5330 aldo/keto reductase YP_003607461.1 KEGG: bpy:Bphyt_5336 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase YP_003607462.1 PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: bxe:Bxe_B1262 epoxide hydrolase YP_003607463.1 TIGRFAM: stationary-phase survival protein SurE; KEGG: bpy:Bphyt_5346 stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_003607464.1 KEGG: bpy:Bphyt_5347 hypothetical protein YP_003607465.1 KEGG: bpy:Bphyt_5353 carbonate dehydratase; PFAM: carbonic anhydrase YP_003607466.1 PFAM: protein of unknown function DUF1488; KEGG: bxe:Bxe_B1253 hypothetical protein YP_003607467.1 KEGG: bxe:Bxe_B1249 precorrin-4 C11-methyltransferase / precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003607468.1 KEGG: bxe:Bxe_B1248 cobalt-precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK YP_003607469.1 KEGG: bpy:Bphyt_5367 cobalt-precorrin-6A synthase; TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein YP_003607470.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; manually curated; KEGG: bxe:Bxe_B1246 precorrin-6Y C5,15-methyltransferase (decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit YP_003607471.1 KEGG: bpy:Bphyt_5369 precorrin-3B synthase; TIGRFAM: precorrin-3B synthase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_003607472.1 KEGG: bxe:Bxe_B1244 precorrin-8X methylmutase; PFAM: precorrin-8X methylmutase CbiC/CobH YP_003607473.1 KEGG: bpy:Bphyt_5371 precorrin-2 C(20)-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003607474.1 TIGRFAM: precorrin-3B C17-methyltransferase; KEGG: bpy:Bphyt_5372 precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein YP_003607475.1 PFAM: SMC domain protein; KEGG: bxe:Bxe_B1236 GTP-binding protein YP_003607476.1 PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B1235 exonuclease YP_003607477.1 PFAM: protein of unknown function DUF445; KEGG: bxe:Bxe_B1234 hypothetical protein YP_003607478.1 PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_B1233 membrane transporter YP_003607479.1 KEGG: bxe:Bxe_C1276 outer membrane autotransporter barrel protein; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Pertactin YP_003607480.1 KEGG: bra:BRADO2693 nucleoside-diphosphate-sugar epimerase YP_003607481.1 PFAM: monooxygenase FAD-binding; KEGG: bpy:Bphyt_5380 FAD-dependent oxidoreductase YP_003607482.1 KEGG: bpy:Bphyt_5381 hypothetical protein YP_003607483.1 KEGG: sus:acid_4136 hypothetical protein YP_003607484.1 KEGG: sus:acid_4137 hypothetical protein YP_003607485.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bxe:Bxe_B1224 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003607486.1 PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B1223 aldolase II superfamily protein YP_003607487.1 KEGG: bpy:Bphyt_5384 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II YP_003607488.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5385 LysR family transcriptional regulator YP_003607489.1 KEGG: bpy:Bphyt_5386 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003607490.1 KEGG: bpy:Bphyt_5387 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_003607491.1 KEGG: bxe:Bxe_B1218 CheB methylesterase; PFAM: CheB methylesterase YP_003607492.1 KEGG: bpy:Bphyt_5389 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_003607493.1 KEGG: bpy:Bphyt_5390 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; GAF domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; response regulator receiver YP_003607494.1 KEGG: bxe:Bxe_B1215 hydroperoxidase II; PFAM: catalase related subgroup; catalase domain protein; ThiJ/PfpI domain protein YP_003607495.1 PFAM: MltA-interacting MipA family protein; KEGG: bxe:Bxe_B1214 hypothetical protein YP_003607496.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bpy:Bphyt_5394 peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A YP_003607497.1 KEGG: bpy:Bphyt_5396 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003607498.1 TIGRFAM: 1-aminocyclopropane-1-carboxylate deaminase; KEGG: bph:Bphy_7821 1-aminocyclopropane-1-carboxylate deaminase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003607499.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5398 LysR family transcriptional regulator YP_003607500.1 PFAM: pirin; KEGG: bpy:Bphyt_5399 pirin domain protein YP_003607501.1 PFAM: DoxX family protein; Surfeit locus 4 family protein; KEGG: bpy:Bphyt_5400 DoxX family protein YP_003607502.1 PFAM: Integrase catalytic region; KEGG: bcj:BCAS0033 transposase YP_003607503.1 KEGG: bac:BamMC406_2351 transposase IS3/IS911 family protein YP_003607504.1 KEGG: bxe:Bxe_B1206 AhpF; TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003607505.1 KEGG: bpy:Bphyt_5403 peroxiredoxin; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen YP_003607506.1 TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain protein; helix-turn-helix Fis-type; KEGG: bpy:Bphyt_5404 proprionate catabolism activator, fis family; SMART: AAA ATPase YP_003607507.1 PFAM: isocitrate lyase and phosphorylmutase; KEGG: bxe:Bxe_B1203 2,3-dimethylmalate lyase YP_003607508.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_5406 major facilitator superfamily MFS_1 YP_003607509.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B1201 hypothetical protein YP_003607510.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B1199 procollagen-proline,2-oxoglutarate-4-dioxygenase; SMART: prolyl 4-hydroxylase subunit alpha YP_003607511.1 PFAM: protein of unknown function DUF1486; KEGG: bxe:Bxe_B1198 hypothetical protein YP_003607512.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1197 major facilitator superfamily multidrug efflux transporter YP_003607513.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5412 LysR family transcriptional regulator YP_003607514.1 PFAM: regulatory protein LysR; KEGG: bxe:Bxe_B1193 ModE family transcriptional regulator YP_003607515.1 PFAM: NifQ family protein; KEGG: bcj:BCAS0012 NifQ protein YP_003607516.1 KEGG: bxe:Bxe_B1188 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_003607517.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bxe:Bxe_B1187 pilus assembly protein CpaE YP_003607518.1 KEGG: bpy:Bphyt_5416 hypothetical protein YP_003607519.1 KEGG: bpy:Bphyt_5417 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_003607520.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bpy:Bphyt_5420 MscS mechanosensitive ion channel YP_003607521.1 SMART: helicase c2; Helicase-like, DEXD box c2 type; KEGG: bxe:Bxe_B1180 hypothetical protein YP_003607522.1 PFAM: VRR-NUC domain protein; KEGG: bpy:Bphyt_5422 VRR-NUC domain protein YP_003607523.1 PFAM: protein of unknown function DUF162; KEGG: bpy:Bphyt_5427 protein of unknown function DUF162 YP_003607524.1 PFAM: protein of unknown function DUF162; KEGG: bpy:Bphyt_5428 protein of unknown function DUF162 YP_003607525.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bxe:Bxe_B1176 oxidoreductase YP_003607526.1 KEGG: bph:Bphy_2245 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003607527.1 PFAM: xylose isomerase; KEGG: sml:Smlt1193 xylose isomerase family protein YP_003607528.1 PFAM: oxidoreductase domain protein; KEGG: sme:SMc04253 oxidoreductase protein YP_003607529.1 KEGG: bxe:Bxe_B1175 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003607530.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bpy:Bphyt_5433 peptidase S10 serine carboxypeptidase YP_003607531.1 KEGG: bph:Bphy_6543 hypothetical protein YP_003607532.1 KEGG: mmr:Mmar10_2481 hypothetical protein YP_003607533.1 PFAM: aminotransferase class I and II; KEGG: bpy:Bphyt_5434 aminotransferase class I and II YP_003607534.1 KEGG: bpy:Bphyt_5435 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor YP_003607535.1 KEGG: bph:Bphy_5303 transport-associated; PFAM: transport-associated; SMART: transport-associated and nodulation region YP_003607536.1 PFAM: protein of unknown function DUF2383; KEGG: bpy:Bphyt_5437 hypothetical protein YP_003607538.1 KEGG: bxe:Bxe_B1167 hypothetical protein YP_003607539.1 PFAM: protein of unknown function DUF1488; KEGG: bpy:Bphyt_5440 hypothetical protein YP_003607540.1 KEGG: bpy:Bphyt_5441 hypothetical protein YP_003607541.1 KEGG: bpy:Bphyt_5442 intracellular protease PfpI family; TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein YP_003607542.1 KEGG: bxe:Bxe_B1163 hypothetical protein YP_003607543.1 KEGG: bpy:Bphyt_5444 DNA topoisomerase YP_003607544.1 KEGG: bph:Bphy_5296 hypothetical protein YP_003607545.1 KEGG: bxe:Bxe_B1161 hypothetical protein YP_003607546.1 PFAM: PRC-barrel domain protein; KEGG: bxe:Bxe_B1160 hypothetical protein YP_003607547.1 KEGG: bxe:Bxe_B1159 hypothetical protein YP_003607548.1 PFAM: extracellular ligand-binding receptor; KEGG: bph:Bphy_6618 extracellular ligand-binding receptor YP_003607549.1 KEGG: bvi:Bcep1808_6420 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase YP_003607550.1 KEGG: bpy:Bphyt_5339 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003607551.1 KEGG: bxe:Bxe_B1157 hypothetical protein YP_003607552.1 KEGG: bxe:Bxe_B1156 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_003607553.1 KEGG: bpy:Bphyt_5451 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase YP_003607554.1 PFAM: fatty acid hydroxylase; KEGG: bph:Bphy_1485 fatty acid hydroxylase YP_003607555.1 KEGG: bxe:Bxe_A1516 hypothetical protein YP_003607556.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_5452 aldo/keto reductase YP_003607557.1 KEGG: bpy:Bphyt_5453 DEAD/H associated domain protein; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase; SMART: DEAD-like helicase ; helicase domain protein YP_003607558.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: bpy:Bphyt_5454 RNase II stability modulator; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003607559.1 PFAM: malate/L-lactate dehydrogenase; KEGG: bpy:Bphyt_5456 hypothetical protein YP_003607560.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bxe:Bxe_B1150 peptidase YP_003607561.1 KEGG: bxe:Bxe_B1149 hypothetical protein YP_003607562.1 PFAM: protein of unknown function DUF2158; KEGG: bxe:Bxe_B1148 hypothetical protein YP_003607563.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1147 major facilitator superfamily drug efflux transporter YP_003607564.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B1146 TetR family transcriptional regulator YP_003607565.1 TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: bpy:Bphyt_5465 OsmC family protein; PFAM: OsmC family protein YP_003607566.1 KEGG: bxe:Bxe_B1144 hypothetical protein YP_003607567.1 KEGG: bxe:Bxe_B1143 hypothetical protein YP_003607568.1 PFAM: aminotransferase class-III; KEGG: bpy:Bphyt_5468 hypothetical protein YP_003607569.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bpy:Bphyt_5469 RpiR family transcriptional regulator YP_003607570.1 KEGG: hypothetical protein YP_003607571.1 KEGG: hypothetical protein MGC115321 YP_003607572.1 KEGG: gbe:GbCGDNIH1_1163 hypothetical protein YP_003607573.1 PFAM: protein of unknown function DUF849; KEGG: mno:Mnod_0229 protein of unknown function DUF849 YP_003607574.1 PFAM: aldehyde dehydrogenase; KEGG: rru:Rru_A0462 aldehyde dehydrogenase YP_003607575.1 PFAM: protein of unknown function DUF1330; KEGG: cai:Caci_2667 protein of unknown function DUF1330 YP_003607576.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_2630 enoyl-CoA hydratase YP_003607577.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbt:BBta_2631 formyl-coenzyme A transferase, L-carnitine dehydratase YP_003607578.1 PFAM: major facilitator superfamily MFS_1; KEGG: ctt:CtCNB1_0867 major facilitator superfamily MFS_1 YP_003607579.1 KEGG: hch:HCH_05799 transcriptional regulator YP_003607580.1 KEGG: bpy:Bphyt_7236 major facilitator superfamily MFS_1; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003607581.1 KEGG: pfo:Pfl01_3059 integrase catalytic subunit YP_003607582.1 KEGG: bph:Bphy_4497 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003607583.1 KEGG: bcj:BCAL0721 acetate permease; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_003607584.1 PFAM: protein of unknown function DUF485; KEGG: bcj:BCAL0720 hypothetical protein YP_003607585.1 PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_A0999 electron transfer flavoprotein subunit alpha YP_003607586.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: bph:Bphy_0762 electron transfer flavoprotein alpha/beta-subunit YP_003607587.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mag:amb2607 2-nitropropane dioxygenase-like protein YP_003607588.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rfr:Rfer_2590 L-carnitine dehydratase/bile acid-inducible protein F YP_003607589.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: ctt:CtCNB1_3759 enoyl-CoA hydratase/isomerase YP_003607590.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A1389 acyl-CoA dehydrogenase YP_003607591.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_2737 acyl-CoA dehydrogenase domain protein YP_003607592.1 KEGG: vap:Vapar_0843 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003607593.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: rfr:Rfer_2595 3-hydroxyacyl-CoA dehydrogenase, NAD-binding YP_003607594.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reh:H16_A3352 LysR family transcriptional regulator YP_003607595.1 PFAM: LysR substrate-binding; KEGG: bbr:BB3951 transcriptional regulator YP_003607596.1 PFAM: ThiJ/PfpI domain protein; KEGG: bpd:BURPS668_A0702 DJ-1/PfpI family protein YP_003607597.1 KEGG: mpt:Mpe_A2041 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003607598.1 KEGG: met:M446_3567 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003607599.1 KEGG: reh:H16_B1778 peptidase; PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold YP_003607600.1 PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_II2254 epoxide hydrolase YP_003607601.1 PFAM: MaoC domain protein dehydratase; KEGG: msl:Msil_3209 MaoC domain protein dehydratase YP_003607602.1 KEGG: rlg:Rleg_1661 short-chain dehydrogenase/reductase SDR YP_003607603.1 KEGG: bxe:Bxe_B2306 HAD family hydrolase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: haloacid dehalogenase YP_003607604.1 PFAM: extracellular ligand-binding receptor; KEGG: bpy:Bphyt_5695 extracellular ligand-binding receptor YP_003607605.1 KEGG: bpy:Bphyt_5694 proline racemase; PFAM: proline racemase YP_003607606.1 KEGG: bpy:Bphyt_1599 hypothetical protein YP_003607607.1 KEGG: bpy:Bphyt_3699 hypothetical protein YP_003607608.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: bpy:Bphyt_5524 amylo-alpha-16-glucosidase YP_003607609.1 TIGRFAM: citrate synthase I; KEGG: bxe:Bxe_B1134 type II citrate synthase; PFAM: citrate synthase YP_003607610.1 KEGG: bpy:Bphyt_5526 hypothetical protein YP_003607611.1 KEGG: bpy:Bphyt_5527 alpha/beta hydrolase fold; manually curated; PFAM: alpha/beta hydrolase fold YP_003607612.1 KEGG: bxe:Bxe_B1131 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_003607613.1 PFAM: phospholipase/carboxylesterase; KEGG: bxe:Bxe_B1130 hydrolase YpfH YP_003607614.1 KEGG: bxe:Bxe_B1129 major facilitator superfamily multidrug efflux transporter; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003607615.1 KEGG: bpy:Bphyt_5531 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003607616.1 PFAM: NmrA family protein; KEGG: bam:Bamb_6112 NmrA family protein YP_003607617.1 PFAM: alpha/beta hydrolase fold; KEGG: reu:Reut_A0274 alpha/beta hydrolase fold YP_003607618.1 KEGG: tbd:Tbd_1622 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003607619.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azo:azo1954 short-chain dehydrogenase family protein YP_003607620.1 KEGG: dar:Daro_1333 hemerythrin HHE cation binding region; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: hemerythrin HHE cation binding domain protein YP_003607621.1 PFAM: cupin; KEGG: dar:Daro_1347 hypothetical protein YP_003607622.1 PFAM: alcohol dehydrogenase GroES; alcohol dehydrogenase zinc-binding domain protein; KEGG: dar:Daro_1348 zinc-containing alcohol dehydrogenase superfamily protein YP_003607623.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_5219 porin YP_003607624.1 KEGG: bxe:Bxe_B2325 4-hydroxy-2-ketovalerate aldolase; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein YP_003607625.1 TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: reu:Reut_B5824 acetaldehyde dehydrogenase; PFAM: acetaldehyde dehydrogenase ; semialdehyde dehydrogenase NAD - binding YP_003607626.1 KEGG: reu:Reut_A0272 4-oxalocrotonate decarboxylase; PFAM: fumarylacetoacetate hydrolase YP_003607627.1 PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: reu:Reut_A0271 3-(2,3-dihydroxyphenyl)propionate dioxygenase YP_003607628.1 KEGG: dar:Daro_1334 hypothetical protein YP_003607629.1 PFAM: alpha/beta hydrolase fold; KEGG: bvi:Bcep1808_7611 alpha/beta hydrolase fold YP_003607630.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bra:BRADO6043 biphenyl-2,3-diol 1,2-dioxygenase (23OHBP oxygenase) (2,3-dihydroxybiphenyl dioxygenase) (DhbD) YP_003607631.1 PFAM: amidase; KEGG: dar:Daro_1337 indole acetimide hydrolase YP_003607632.1 KEGG: azo:azo1958 hydantoin racemase YP_003607633.1 KEGG: azo:azo1959 hypothetical protein YP_003607634.1 PFAM: oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: azo:azo1960 2-oxo-1,2-dihydroquinoline 8-monooxygenase, reductase component YP_003607635.1 PFAM: amidase; KEGG: dar:Daro_1360 amidase YP_003607636.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: azo:azo1977 2-oxo-1,2-dihydroquinoline 8-monooxygenase,oxygenase component YP_003607637.1 KEGG: azo:azo1965 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003607638.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bmj:BMULJ_04196 acyl-CoA synthetase YP_003607639.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; cobalamin synthesis protein P47K; KEGG: reh:PHG101 transposase YP_003607640.1 PFAM: alcohol dehydrogenase GroES; KEGG: vei:Veis_4413 alcohol dehydrogenase YP_003607641.1 KEGG: noc:Noc_1470 hypothetical protein YP_003607642.1 KEGG: bph:Bphy_6969 hypothetical protein YP_003607643.1 KEGG: bph:Bphy_6969 hypothetical protein YP_003607644.1 KEGG: bph:Bphy_6967 Tn7-like transposition protein C YP_003607645.1 KEGG: bph:Bphy_6966 hypothetical protein YP_003607646.1 PFAM: TnsA endonuclease; KEGG: tau:Tola_0303 TnsA endonuclease YP_003607647.1 KEGG: bph:Bphy_4067 chromosome segregation ATPase-like protein YP_003607648.1 KEGG: cth:Cthe_1873 HMG-I and HMG-Y, DNA-binding YP_003607649.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bcm:Bcenmc03_6926 integrase family protein YP_003607650.1 KEGG: tro:trd_A0438 hypothetical protein YP_003607651.1 PFAM: major facilitator superfamily MFS_1; KEGG: plu:plu3937 hypothetical protein YP_003607652.1 KEGG: rpf:Rpic12D_3070 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003607653.1 KEGG: bps:BPSS1927 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_003607654.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: swi:Swit_1571 NADH:flavin oxidoreductase/NADH oxidase YP_003607655.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_1920 short-chain dehydrogenase/reductase SDR YP_003607656.1 PFAM: cytochrome C class I; KEGG: eba:ebA299 p-cresol methylhydroxylase subunit YP_003607657.1 PFAM: FAD linked oxidase; KEGG: eba:ebA300 p-cresol methylhydroxylase subunit YP_003607658.1 KEGG: eba:ebA302 hypothetical protein YP_003607659.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nar:Saro_3432 short-chain dehydrogenase/reductase SDR YP_003607660.1 TIGRFAM: succinic semialdehyde dehydrogenase; KEGG: acr:Acry_0274 succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003607661.1 PFAM: dihydrodipicolinate synthetase; KEGG: swi:Swit_1567 dihydrodipicolinate synthetase YP_003607662.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: swi:Swit_1566 ornithine cyclodeaminase YP_003607663.1 PFAM: YceI family protein; KEGG: rso:RS03182 signal peptide protein YP_003607664.1 KEGG: pfs:PFLU1941 GntR-family regulatory protein; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003607665.1 PFAM: protein of unknown function DUF849; KEGG: acr:Acry_2778 hypothetical protein YP_003607666.1 PFAM: monooxygenase FAD-binding; KEGG: bja:bll8212 hypothetical protein YP_003607667.1 PFAM: protein of unknown function DUF1302; KEGG: ppu:PP_3200 hypothetical protein YP_003607668.1 PFAM: protein of unknown function DUF1329; KEGG: mmw:Mmwyl1_3146 hypothetical protein YP_003607669.1 PFAM: cupin; KEGG: swi:Swit_1555 hypothetical protein YP_003607670.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xau:Xaut_2391 glyoxalase/bleomycin resistance protein/dioxygenase YP_003607671.1 KEGG: bvi:Bcep1808_1632 Rieske (2Fe-2S) domain-containing protein; manually curated; PFAM: Rieske [2Fe-2S] iron-sulphur domain YP_003607672.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_B4339 regulatory protein, LysR:LysR, substrate-binding YP_003607673.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: reu:Reut_B4340 Rieske (2Fe-2S) region YP_003607674.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: reu:Reut_B4341 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region YP_003607675.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_1634 major facilitator transporter YP_003607676.1 PFAM: regulatory protein TetR; KEGG: swi:Swit_1553 TetR family transcriptional regulator YP_003607677.1 PFAM: thioesterase superfamily protein; KEGG: gme:Gmet_2253 phenylacetic acid degradation-related protein YP_003607678.1 PFAM: fumarylacetoacetate hydrolase; KEGG: tro:trd_A0072 fumarylacetoacetate hydrolase domain-containing protein 2 YP_003607679.1 KEGG: bpt:Bpet4337 azurin precursor; TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein YP_003607680.1 PFAM: regulatory protein TetR; KEGG: gvi:glr3170 TetR family transcriptional regulatory protein YP_003607681.1 KEGG: mmw:Mmwyl1_3143 BNR domain-containing protein YP_003607682.1 KEGG: mmw:Mmwyl1_3142 transporter YP_003607683.1 KEGG: swi:Swit_1548 ABC-type nitrate/sulfonate/bicarbonate transporters periplasmic components-like protein YP_003607684.1 PFAM: fumarylacetoacetate hydrolase; KEGG: swi:Swit_1547 fumarylacetoacetate hydrolase YP_003607685.1 PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_1562 major facilitator transporter YP_003607686.1 KEGG: eel:EUBELI_00894 translation initiation factor IF-2 YP_003607687.1 PFAM: monooxygenase FAD-binding; KEGG: swi:Swit_1569 monooxygenase, FAD-binding YP_003607688.1 TIGRFAM: homogentisate 1,2-dioxygenase; KEGG: mxa:MXAN_2787 homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase YP_003607689.1 PFAM: fumarylacetoacetate hydrolase; KEGG: hch:HCH_00953 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_003607690.1 KEGG: dac:Daci_0043 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003607691.1 KEGG: pat:Patl_3990 OmpA/MotB YP_003607694.1 KEGG: bps:BPSL0756 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003607695.1 KEGG: bpd:BURPS668_3495 hypothetical protein YP_003607696.1 manually curated; KEGG: rme:Rmet_2157 hypothetical protein YP_003607697.1 KEGG: ajs:Ajs_0813 hypothetical protein YP_003607698.1 KEGG: mms:mma_2781 hypothetical protein YP_003607699.1 KEGG: bps:BPSL0770 hypothetical protein YP_003607700.1 manually curated; KEGG: bps:BPSL0769 hypothetical protein YP_003607701.1 KEGG: bps:BPSL0768 hypothetical protein YP_003607702.1 PFAM: transcriptional regulator PadR family protein; KEGG: bpy:Bphyt_5629 transcriptional regulator, PadR-like family YP_003607703.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: bpy:Bphyt_5630 FAD-binding 9 siderophore-interacting domain protein YP_003607704.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1090 major facilitator transporter YP_003607705.1 PFAM: protein of unknown function UPF0118; KEGG: bpy:Bphyt_5642 protein of unknown function UPF0118 YP_003607706.1 PFAM: CsbD family protein; KEGG: bpy:Bphyt_5644 CsbD family protein YP_003607707.1 KEGG: dma:DMR_06750 general secretion pathway protein YP_003607708.1 KEGG: adg:Adeg_2000 hypothetical protein YP_003607709.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_5645 enoyl-CoA hydratase/isomerase YP_003607710.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_B1088 enoyl-CoA hydratase YP_003607711.1 KEGG: bxe:Bxe_B1087 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_003607712.1 KEGG: bxe:Bxe_B1086 acylating methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003607713.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bpy:Bphyt_5649 AMP-dependent synthetase and ligase YP_003607714.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_B1084 butyryl-CoA dehydrogenase YP_003607715.1 KEGG: bpy:Bphyt_5651 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003607716.1 PFAM: protein of unknown function DUF107; KEGG: bxe:Bxe_B1082 hypothetical protein YP_003607717.1 KEGG: bxe:Bxe_B1081 SPFH domain-containing protein/band 7 family protein; PFAM: band 7 protein; SMART: band 7 protein YP_003607718.1 KEGG: bxe:Bxe_B1080 hypothetical protein YP_003607719.1 PFAM: protein of unknown function DUF188; KEGG: bpy:Bphyt_5655 protein of unknown function DUF188 YP_003607720.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: bxe:Bxe_B1078 NCS2 family nucleobase/cation symporter YP_003607721.1 PFAM: cytochrome B561; KEGG: bpy:Bphyt_5657 cytochrome b561 YP_003607722.1 PFAM: protein of unknown function DUF1488; KEGG: bxe:Bxe_B1076 hypothetical protein YP_003607723.1 PFAM: ferredoxin; KEGG: bpy:Bphyt_5660 ferredoxin YP_003607724.1 KEGG: bxe:Bxe_B1073 hypothetical protein YP_003607725.1 PFAM: protein of unknown function DUF1653; KEGG: bxe:Bxe_B1072 hypothetical protein YP_003607726.1 PFAM: YheO domain protein; KEGG: bxe:Bxe_B1071 hypothetical protein YP_003607727.1 KEGG: bpy:Bphyt_5664 hypothetical protein YP_003607728.1 KEGG: bxe:Bxe_B1068 hypothetical protein YP_003607729.1 KEGG: bpy:Bphyt_5666 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_003607730.1 PFAM: ANTAR domain protein; response regulator receiver; KEGG: bxe:Bxe_B1048 response regulator receiver/ANTAR domain-containing protein YP_003607731.1 KEGG: bpy:Bphyt_5674 ABC nitrate transporter periplasmic ligand binding protein YP_003607732.1 TIGRFAM: rhamnose ABC transporter periplasmic rhamnose-binding protein; KEGG: bxe:Bxe_B1038 ABC sugar transporter periplasmic ligand binding protein YP_003607733.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1037 ABC sugar transporter inner membrane subunit YP_003607734.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1036 ABC sugar transporter inner membrane subunit YP_003607735.1 KEGG: bpy:Bphyt_5684 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003607736.1 PFAM: amidohydrolase; KEGG: bxe:Bxe_B1034 hypothetical protein YP_003607737.1 KEGG: bpy:Bphyt_5686 L-rhamnose 1-epimerase; TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718 YP_003607738.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B1032 LysR family transcriptional regulator YP_003607739.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1031 short-chain alcohol dehydrogenase YP_003607740.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: bpy:Bphyt_5689 mandelate racemase/muconate lactonizing protein YP_003607741.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1028 3-oxoacyl-(acyl-carrier protein) reductase YP_003607742.1 KEGG: bpy:Bphyt_4464 hypothetical protein YP_003607743.1 KEGG: bpy:Bphyt_3697 hypothetical protein YP_003607744.1 KEGG: bxe:Bxe_B1020 hypothetical protein YP_003607745.1 KEGG: bxe:Bxe_B1019 hypothetical protein YP_003607746.1 KEGG: bpy:Bphyt_5701 hypothetical protein YP_003607747.1 KEGG: bxe:Bxe_B1017 protein tyrosine phosphatase; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_003607748.1 KEGG: bpy:Bphyt_5705 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003607749.1 KEGG: bxe:Bxe_B1014 NADPH-dependent FMN reductase family protein; manually curated; PFAM: NADPH-dependent FMN reductase YP_003607750.1 KEGG: bxe:Bxe_B1013 hypothetical protein YP_003607751.1 PFAM: amidase; KEGG: bpy:Bphyt_5709 indole acetimide hydrolase YP_003607752.1 KEGG: bpy:Bphyt_5710 CDP-diacylglycerol diphosphatase; PFAM: CDP-diacylglycerol pyrophosphatase YP_003607753.1 PFAM: fatty acid desaturase; KEGG: bxe:Bxe_B1009 fatty acid desaturase YP_003607754.1 KEGG: gbr:Gbro_4097 hypothetical protein YP_003607755.1 KEGG: bph:Bphy_4628 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003607756.1 KEGG: pmu:PM1468 hypothetical protein YP_003607757.1 KEGG: mem:Memar_2035 nitroreductase; TIGRFAM: SagB-type dehydrogenase domain; PFAM: nitroreductase YP_003607758.1 PFAM: glutamine amidotransferase class-II; KEGG: bxe:Bxe_B1298 hypothetical protein YP_003607759.1 KEGG: bph:Bphy_6400 hypothetical protein YP_003607760.1 PFAM: natural resistance-associated macrophage protein; KEGG: bcj:BCAS0630 transporter-NRAMP family YP_003607761.1 PFAM: metallophosphoesterase; KEGG: cpi:Cpin_5228 metallophosphoesterase YP_003607762.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; hypothetical protein; KEGG: bph:Bphy_4272 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein YP_003607763.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bmj:BMULJ_05405 LysR family transcriptional regulator YP_003607764.1 KEGG: bmj:BMULJ_05404 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase YP_003607765.1 KEGG: bmj:BMULJ_05403 formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_003607766.1 PFAM: MaoC domain protein dehydratase; KEGG: bph:Bphy_6022 dehydratase YP_003607767.1 KEGG: bph:Bphy_6021 glyoxalase/bleomycin resistance protein/dioxygenase YP_003607768.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bph:Bphy_6020 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003607769.1 KEGG: bpy:Bphyt_4492 hypothetical protein YP_003607770.1 KEGG: bpy:Bphyt_4494 hypothetical protein YP_003607771.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSp0947 gluconate 5-dehydrogenase oxidoreductase protein YP_003607772.1 KEGG: azo:azo3909 sensor protein YP_003607774.1 PFAM: ParB-like nuclease; KEGG: bpy:Bphyt_2350 ParB-like nuclease YP_003607775.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: bgl:bglu_2g10910 hypothetical protein YP_003607776.1 KEGG: bgl:bglu_2g10920 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_003607777.1 KEGG: bgl:bglu_2g10930 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_003607778.1 KEGG: bgl:bglu_2g10940 hypothetical protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein YP_003607779.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bac:BamMC406_3655 hypothetical protein YP_003607780.1 KEGG: bac:BamMC406_3654 hypothetical protein YP_003607781.1 KEGG: bac:BamMC406_3652 chitinase-like protein YP_003607782.1 KEGG: bac:BamMC406_3651 rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: protein of unknown function DUF2345; Rhs element Vgr protein YP_003607783.1 KEGG: bgl:bglu_2g11040 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_003607784.1 KEGG: bac:BamMC406_3649 type VI secretion protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein YP_003607785.1 KEGG: bgl:bglu_2g11060 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_003607786.1 KEGG: bgl:bglu_2g11070 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: type IV / VI secretion system, DotU YP_003607787.1 KEGG: GK12364 gene product from transcript GK12364-RA YP_003607788.1 PFAM: OmpA/MotB domain protein; KEGG: bgl:bglu_2g11080 outer membrane protein YP_003607789.1 KEGG: bac:BamMC406_3645 Hcp1 family type VI secretion system effector; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_003607790.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA; ATPase AAA; Clp domain protein; Clp ATPase-like; KEGG: bgl:bglu_2g11100 ATPase with chaperone activity ATP-binding subunit; SMART: ATPase AAA YP_003607791.1 KEGG: bgl:bglu_2g11110 hypothetical protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein YP_003607792.1 KEGG: hypothetical protein YP_003607793.1 PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_C1351 CPA1 family Na(+)/H(+) antiporter YP_003607794.1 KEGG: bpy:Bphyt_4691 hypothetical protein YP_003607795.1 KEGG: bxe:Bxe_B0964 ABC phosphate/phosphonate transporter periplasmic ligand binding protein YP_003607796.1 PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: bxe:Bxe_B0963 3-methylcrotonoyl-CoA carboxylase, subunit alpha YP_003607797.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_4688 enoyl-CoA hydratase YP_003607798.1 KEGG: bxe:Bxe_B0961 propionyl-CoA carboxylase; PFAM: carboxyl transferase YP_003607799.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_4686 acyl-CoA dehydrogenase domain protein YP_003607800.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_4685 TetR family transcriptional regulator YP_003607801.1 PFAM: protein of unknown function DUF72; KEGG: bpy:Bphyt_4684 protein of unknown function DUF72 YP_003607802.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bpy:Bphyt_4683 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003607803.1 KEGG: bpy:Bphyt_4682 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003607804.1 KEGG: bxe:Bxe_B0955 hypothetical protein YP_003607805.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bxe:Bxe_B0954 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_003607806.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bxe:Bxe_B0953 hypothetical protein YP_003607807.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_4677 LysR family transcriptional regulator YP_003607808.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0951 major facilitator transporter YP_003607809.1 KEGG: bxe:Bxe_B0950 alkylhydroperoxidase AhpD; TIGRFAM: peroxidase; alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase YP_003607810.1 PFAM: cupin; KEGG: bpy:Bphyt_4674 cupin 2 conserved barrel domain protein YP_003607811.1 KEGG: bpy:Bphyt_4673 transmembrane protein YP_003607812.1 KEGG: bpy:Bphyt_4667 peptidase C26; PFAM: peptidase C26 YP_003607813.1 KEGG: bpy:Bphyt_4666 glutamate--putrescine ligase; PFAM: glutamine synthetase YP_003607814.1 PFAM: aminotransferase class-III; KEGG: bpy:Bphyt_4665 aminotransferase YP_003607815.1 PFAM: alpha/beta hydrolase fold; KEGG: vei:Veis_1360 alpha/beta hydrolase fold YP_003607816.1 PFAM: protein of unknown function DUF2278; KEGG: rso:RSc1547 hypothetical protein YP_003607817.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpf:Rpic12D_1996 major facilitator superfamily MFS_1 YP_003607818.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bcm:Bcenmc03_2607 benzoylformate decarboxylase YP_003607819.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpf:Rpic12D_2000 LysR family transcriptional regulator YP_003607820.1 KEGG: bxe:Bxe_B0931 hypothetical protein YP_003607821.1 PFAM: DNA polymerase B region; DNA polymerase B exonuclease; KEGG: bpy:Bphyt_4655 DNA polymerase II; SMART: DNA-directed DNA polymerase B YP_003607822.1 KEGG: bph:Bphy_3244 transport-associated; PFAM: transport-associated; SMART: transport-associated and nodulation region YP_003607823.1 TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; haloacid dehalogenase; KEGG: rpf:Rpic12D_3533 ATPase P; SMART: TRASH domain protein YP_003607824.1 KEGG: mrd:Mrad2831_0708 molybdopterin binding domain-containing protein YP_003607825.1 manually curated; PFAM: DNA/RNA non-specific endonuclease; KEGG: msl:Msil_1093 DNA/RNA non-specific endonuclease; SMART: extracellular endonuclease, subunit A YP_003607826.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4647 major facilitator superfamily MFS_1 YP_003607827.1 PFAM: aconitate hydratase domain protein; KEGG: bpy:Bphyt_4646 3-isopropylmalate dehydratase YP_003607828.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_4645 LysR family transcriptional regulator YP_003607829.1 PFAM: protein of unknown function DUF2086; KEGG: bcj:BCAM2490 hypothetical protein YP_003607830.1 PFAM: DSBA oxidoreductase; KEGG: bxe:Bxe_B0416 dithiol-disulfide isomerase YP_003607831.1 PFAM: hypothetical protein; KEGG: bmj:BMULJ_00033 hypothetical protein YP_003607832.1 PFAM: protein of unknown function DUF1255; KEGG: bph:Bphy_6412 hypothetical protein YP_003607833.1 KEGG: bph:Bphy_5879 transport-associated; PFAM: transport-associated; SMART: transport-associated and nodulation region YP_003607834.1 KEGG: bph:Bphy_5757 hypothetical protein YP_003607835.1 PFAM: major royal jelly protein; KEGG: mrd:Mrad2831_6245 hypothetical protein YP_003607836.1 PFAM: paraquat-inducible protein A; KEGG: bvi:Bcep1808_5627 paraquat-inducible protein A YP_003607837.1 PFAM: hypothetical protein; KEGG: bmj:BMULJ_05700 paraquat-inducible protein B YP_003607838.1 PFAM: protein of unknown function DUF330; KEGG: bph:Bphy_5258 hypothetical protein YP_003607839.1 KEGG: bam:Bamb_4043 MarR family transcriptional regulator; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR YP_003607840.1 PFAM: extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: xca:xccb100_3546 protocatechuate 4,5-dioxygenase subunit alpha YP_003607841.1 PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: xca:xccb100_3547 protocatechuate 4,5-dioxygenase subunit beta YP_003607842.1 KEGG: bph:Bphy_6553 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003607843.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_6554 LysR family transcriptional regulator YP_003607844.1 KEGG: bpy:Bphyt_4628 hypotheticalprotein; PFAM: hypothetical protein; hypotheticalprotein; SMART: Tetratricopeptide repeat YP_003607845.1 KEGG: bxe:Bxe_B0910 hypothetical protein YP_003607846.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bpy:Bphyt_4626 TonB-dependent receptor YP_003607847.1 PFAM: propeptide PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: bxe:Bxe_B0908 integral membrane protein YP_003607848.1 KEGG: rsh:Rsph17029_3792 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003607849.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2098 major facilitator transporter YP_003607850.1 PFAM: fatty acid hydroxylase; KEGG: bpy:Bphyt_4620 fatty acid hydroxylase YP_003607851.1 PFAM: peptidase M23; KEGG: eba:ebA932 peptidase family protein YP_003607852.1 KEGG: bpy:Bphyt_4743 hypothetical protein YP_003607853.1 KEGG: bpy:Bphyt_6161 hypothetical protein YP_003607854.1 PFAM: Uncharacterised conserved protein UCP019302; KEGG: bxe:Bxe_B0906 hypothetical protein YP_003607855.1 KEGG: bcj:BCAM1783 hypothetical protein YP_003607856.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_4588 binding-protein-dependent transport systems inner membrane component YP_003607857.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_4587 binding-protein-dependent transport systems inner membrane component YP_003607858.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_4586 extracellular solute-binding protein family 1 YP_003607859.1 KEGG: bpy:Bphyt_4585 beta-galactosidase; PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein YP_003607860.1 KEGG: bpy:Bphyt_4584 ABC transporter; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003607861.1 KEGG: bpy:Bphyt_4583 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003607862.1 PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mll1522 multidrug efflux protein YP_003607863.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_4581 monosaccharide-transporting ATPase YP_003607864.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B0893 ABC sugar transporter inner membrane subunit YP_003607865.1 KEGG: bxe:Bxe_B0892 ABC sugar transporter ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_003607866.1 PFAM: ROK family protein; KEGG: bpy:Bphyt_4578 ROK family protein YP_003607867.1 PFAM: glycosyl transferase family 51; KEGG: bxe:Bxe_B0890 hypothetical protein YP_003607868.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_4576 LysR family transcriptional regulator YP_003607869.1 PFAM: dihydrodipicolinate synthetase; KEGG: bpy:Bphyt_4575 dihydrodipicolinate synthetase YP_003607870.1 PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0887 FAD-binding oxidoreductase YP_003607871.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_4571 TetR family transcriptional regulator YP_003607872.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4570 major facilitator superfamily MFS_1 YP_003607873.1 PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; KEGG: bpy:Bphyt_4569 shikimate 5-dehydrogenase YP_003607874.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: bpy:Bphyt_4568 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_003607875.1 KEGG: bpy:Bphyt_4567 xylose isomerase domain protein TIM barrel; PFAM: xylose isomerase; glyoxalase/bleomycin resistance protein/dioxygenase YP_003607876.1 KEGG: bpy:Bphyt_4566 hypothetical protein YP_003607877.1 KEGG: bxe:Bxe_B0880 hypothetical protein YP_003607878.1 KEGG: bxe:Bxe_B0879 hypothetical protein YP_003607879.1 KEGG: bpy:Bphyt_4563 transcriptional regulator, AraC family; PFAM: hypothetical protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003607880.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bpy:Bphyt_4562 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003607881.1 PFAM: ferredoxin; KEGG: bph:Bphy_4669 ferredoxin YP_003607882.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_4561 FAD dependent oxidoreductase YP_003607883.1 KEGG: bpy:Bphyt_4560 proline racemase; PFAM: proline racemase YP_003607884.1 manually curated; PFAM: transcriptional regulator domain protein; response regulator receiver; KEGG: bxe:Bxe_B0872 two component transcriptional regulator; SMART: response regulator receiver YP_003607885.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4557 major facilitator superfamily MFS_1 YP_003607886.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4556 major facilitator superfamily MFS_1 YP_003607887.1 KEGG: bpy:Bphyt_4555 hypothetical protein YP_003607888.1 PFAM: DoxX family protein; KEGG: bpy:Bphyt_4554 DoxX family protein YP_003607889.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0866 glyoxalase/bleomycin resistance protein/dioxygenase YP_003607890.1 PFAM: RbsD or FucU transport; KEGG: bpy:Bphyt_4552 RbsD or FucU transport YP_003607891.1 KEGG: bpy:Bphyt_4551 hypothetical protein YP_003607892.1 KEGG: bxe:Bxe_B0863 hypothetical protein YP_003607893.1 KEGG: bpy:Bphyt_4549 addiction module killer protein; TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891 YP_003607894.1 TIGRFAM: addiction module antidote protein; KEGG: bxe:Bxe_B0861 transcriptional regulator YP_003607895.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: bpy:Bphyt_4547 XRE family transcriptional regulator; SMART: helix-turn-helix domain protein YP_003607896.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0859 acetyltransferase YP_003607897.1 PFAM: flagellar transcriptional activator; KEGG: bpy:Bphyt_4544 transcriptional activator FlhD YP_003607898.1 PFAM: flagellar transcriptional activator FlhC; KEGG: bpy:Bphyt_4543 transcriptional activator FlhC YP_003607899.1 KEGG: bxe:Bxe_B0856 manganese transporter MntH; TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein YP_003607900.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_4541 acyl-CoA dehydrogenase type 2 domain YP_003607901.1 KEGG: bxe:Bxe_B0851 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003607902.1 KEGG: bxe:Bxe_B0850 RND family hydrophobe/amphiphile efflux pump; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003607903.1 KEGG: bxe:Bxe_B0849 RND efflux system membrane fusion protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003607904.1 PFAM: alpha/beta hydrolase; KEGG: bpy:Bphyt_4533 alpha/beta hydrolase YP_003607905.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_4532 LysR family transcriptional regulator YP_003607906.1 KEGG: bxe:Bxe_B0846 hypothetical protein YP_003607907.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_4529 aldo/keto reductase YP_003607908.1 KEGG: bpy:Bphyt_4528 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003607909.1 PFAM: NAD-glutamate dehydrogenase; KEGG: bxe:Bxe_B0842 glutamate dehydrogenase (NAD) YP_003607910.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_4526 alpha/beta hydrolase fold YP_003607911.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: bpy:Bphyt_4525 zinc carboxypeptidase-related protein YP_003607912.1 KEGG: cvi:CV_2126 hypothetical protein YP_003607913.1 KEGG: psp:PSPPH_4947 hypothetical protein YP_003607914.1 PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 transposase IS4 YP_003607915.1 PFAM: protein of unknown function DUF1311; KEGG: bpy:Bphyt_1079 protein of unknown function DUF1311 YP_003607916.1 KEGG: ABC transporter YP_003607918.1 TIGRFAM: phosphonate ABC transporter ATPase subunit; PFAM: ABC transporter; KEGG: bxe:Bxe_B0839 ABC phophonates transporter ATPase PhnC; SMART: ATPase AAA YP_003607919.1 TIGRFAM: phosphonate ABC transporter periplasmic phosphonate binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein; KEGG: bxe:Bxe_B0838 ABC phosphonates transporter periplasmic ligand binding protein PhnD YP_003607920.1 KEGG: bxe:Bxe_B0837 ABC phosphonate transporter inner membrane subunit PhnE; TIGRFAM: phosphonate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003607921.1 KEGG: bxe:Bxe_B0830 hypothetical protein YP_003607922.1 KEGG: bxe:Bxe_B0825 hypothetical protein YP_003607923.1 PFAM: alpha/beta hydrolase; KEGG: bxe:Bxe_B0824 lipase (esterase) YP_003607924.1 KEGG: bpy:Bphyt_4504 response regulator receiver protein YP_003607925.1 KEGG: bpy:Bphyt_4742 hypothetical protein YP_003607926.1 KEGG: bpy:Bphyt_4503 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003607927.1 PFAM: porin Gram-negative type; KEGG: bph:Bphy_6642 porin YP_003607928.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bxe:Bxe_B0808 LysR family transcriptional regulator YP_003607929.1 PFAM: integral membrane protein TerC; KEGG: bpy:Bphyt_4488 integral membrane protein TerC YP_003607930.1 KEGG: bpy:Bphyt_4486 hypothetical protein YP_003607931.1 PFAM: OmpA/MotB domain protein; KEGG: bxe:Bxe_B0804 hypothetical protein YP_003607932.1 PFAM: protein of unknown function DUF802; KEGG: cti:RALTA_B0337 transmembrane protein, DUF802 YP_003607933.1 KEGG: bxe:Bxe_B0802 hypothetical protein YP_003607934.1 KEGG: bpy:Bphyt_4480 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase YP_003607935.1 KEGG: bxe:Bxe_B0794 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003607936.1 KEGG: bxe:Bxe_B0793 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_003607937.1 KEGG: bxe:Bxe_B0792 hydroxylase; PFAM: 2OG-Fe(II) oxygenase; SMART: prolyl 4-hydroxylase subunit alpha YP_003607938.1 PFAM: Na+/solute symporter; KEGG: bxe:Bxe_B0791 Na+/monocarboxylate symporter YP_003607939.1 KEGG: bxe:Bxe_B0790 hypothetical protein YP_003607940.1 PFAM: Cache type 2 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: bxe:Bxe_B0789 periplasmic sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein YP_003607941.1 KEGG: bpy:Bphyt_4476 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003607942.1 KEGG: bpy:Bphyt_4475 conserved hypothetical signal peptide protein YP_003607943.1 PFAM: sulfatase; KEGG: bpy:Bphyt_4474 sulfatase YP_003607944.1 PFAM: protein of unknown function DUF323; KEGG: bpy:Bphyt_4473 protein of unknown function DUF323 YP_003607945.1 PFAM: NLPA lipoprotein; KEGG: bpy:Bphyt_4472 NlpA lipoprotein YP_003607946.1 manually curated; KEGG: bpy:Bphyt_4471 hypothetical protein YP_003607947.1 PFAM: phospholipase D/transphosphatidylase; KEGG: bpy:Bphyt_4470 phospholipase D/transphosphatidylase YP_003607948.1 KEGG: bpy:Bphyt_4469 hypothetical protein YP_003607949.1 KEGG: bpy:Bphyt_4468 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_003607950.1 KEGG: bpy:Bphyt_7192 hypothetical protein YP_003607951.1 KEGG: bpy:Bphyt_4466 hypothetical protein YP_003607952.1 KEGG: bpy:Bphyt_4465 hypothetical protein YP_003607953.1 PFAM: protein of unknown function DUF1130; KEGG: bpy:Bphyt_4463 hypothetical protein YP_003607954.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bpy:Bphyt_4462 peptidylprolyl isomerase FKBP-type YP_003607955.1 KEGG: bpy:Bphyt_4460 DEAD/H associated domain protein; PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase YP_003607956.1 KEGG: asa:ASA_3447 oxygen-independent coproporphyrinogen III oxidase YP_003607957.1 PFAM: metallophosphoesterase; KEGG: bpy:Bphyt_4459 metallophosphoesterase YP_003607958.1 KEGG: mbo:Mb3541 PE-PGRS family protein YP_003607959.1 PFAM: FAD linked oxidase; Berberine/berberine domain protein; KEGG: bxe:Bxe_B0773 FAD/FMN-containing oxidoreductase YP_003607960.1 KEGG: bpy:Bphyt_4453 lipoprotein YP_003607961.1 KEGG: bxe:Bxe_B0771 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_003607962.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bpy:Bphyt_4449 YbaK/prolyl-tRNA synthetase associated region YP_003607963.1 KEGG: bpy:Bphyt_4448 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_003607964.1 PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_4447 porin gram-negative type YP_003607965.1 KEGG: bxe:Bxe_B0766 hypothetical protein YP_003607966.1 KEGG: bxe:Bxe_B0765 transglutaminase family protein; PFAM: transglutaminase; transglutaminase; SMART: transglutaminase YP_003607967.1 PFAM: protein of unknown function DUF403; KEGG: bxe:Bxe_B0764 hypothetical protein YP_003607968.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bpy:Bphyt_4443 protein of unknown function DUF404 YP_003607969.1 KEGG: bxe:Bxe_B0762 Bph2; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_003607970.1 KEGG: bpy:Bphyt_4441 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003607971.1 KEGG: bph:Bphy_4060 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase YP_003607972.1 KEGG: bxe:Bxe_B0744 hypothetical protein YP_003607973.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bxe:Bxe_B0743 Ketopantoate reductase ApbA/PanE; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003607974.1 KEGG: ele:Elen_3038 transcriptional regulator, LuxR family YP_003607975.1 KEGG: bxe:Bxe_B0738 major facilitator superfamily multidrug efflux pump, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003607976.1 KEGG: bxe:Bxe_B0737 major facilitator superfamily multidrug efflux transporter; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003607977.1 PFAM: secretion protein HlyD; KEGG: bpy:Bphyt_4416 secretion protein HlyD YP_003607978.1 KEGG: bxe:Bxe_B0735 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003607979.1 KEGG: bxe:Bxe_B0734 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003607980.1 KEGG: bph:Bphy_5594 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain YP_003607981.1 KEGG: bph:Bphy_5593 hypothetical protein YP_003607982.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: sml:Smlt0149 hypothetical protein YP_003607983.1 KEGG: mlo:mlr6937 hypothetical protein YP_003607984.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_6689 LysR family transcriptional regulator YP_003607985.1 KEGG: bvi:Bcep1808_3648 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003607986.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: oan:Oant_2567 hypothetical protein YP_003607987.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rec:RHECIAT_CH0002089 transcriptional regulator protein, LysR family YP_003607988.1 KEGG: rpf:Rpic12D_4242 hypothetical protein YP_003607989.1 KEGG: dze:Dd1591_3340 ATPase AAA; PFAM: SMC domain protein; SMART: ATPase AAA YP_003607990.1 KEGG: bxe:Bxe_B0727 transglutaminase family protein; PFAM: transglutaminase; transglutaminase; SMART: transglutaminase YP_003607991.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; protein of unknown function DUF403; KEGG: bpy:Bphyt_4407 protein of unknown function DUF404 YP_003607992.1 KEGG: bpy:Bphyt_4406 transglutaminase domain protein; PFAM: protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase; SMART: transglutaminase domain protein YP_003607993.1 PFAM: protein of unknown function UCP012641; KEGG: bpy:Bphyt_4405 hypothetical protein YP_003607994.1 KEGG: bxe:Bxe_B0722 hypothetical protein YP_003607995.1 KEGG: bxe:Bxe_B0721 hypothetical protein YP_003607996.1 KEGG: bpy:Bphyt_4401 phasin family protein; TIGRFAM: phasin family protein; PFAM: Phasin YP_003607997.1 KEGG: bxe:Bxe_B0717 hypothetical protein YP_003607998.1 KEGG: bxe:Bxe_B0713 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003607999.1 KEGG: bch:Bcen2424_2186 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003608000.1 KEGG: bpy:Bphyt_2251 hypothetical protein YP_003608001.1 PFAM: UspA domain protein; KEGG: bph:Bphy_1633 UspA domain-containing protein YP_003608002.1 PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: vap:Vapar_6375 chloride channel core YP_003608003.1 KEGG: GI24587 gene product from transcript GI24587-RA ; K12824 transcription elongation regulator 1 YP_003608004.1 PFAM: Domain of unknown function DUF1840; KEGG: bpy:Bphyt_6376 domain of unknown function DUF1840 YP_003608005.1 KEGG: bpy:Bphyt_0839 CBS domain containing membrane protein; PFAM: HPP family protein; CBS domain containing protein; SMART: CBS domain containing protein YP_003608006.1 KEGG: bph:Bphy_4485 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003608007.1 PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: bpy:Bphyt_0837 chloride channel core YP_003608008.1 KEGG: bph:Bphy_4482 hypothetical protein YP_003608009.1 KEGG: bph:Bphy_4740 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003608010.1 KEGG: mms:mma_0805 hypothetical protein YP_003608011.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_A3769 transposase YP_003608012.1 PFAM: NmrA family protein; KEGG: bac:BamMC406_4834 NmrA family protein YP_003608013.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_2070 FAD dependent oxidoreductase YP_003608014.1 KEGG: bpy:Bphyt_2071 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003608015.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bpy:Bphyt_2072 ornithine cyclodeaminase/mu-crystallin YP_003608016.1 PFAM: YheO domain protein; KEGG: bpy:Bphyt_2073 YheO domain protein YP_003608017.1 KEGG: ote:Oter_2133 hypothetical protein YP_003608018.1 KEGG: bay:RBAM_035640 YwbC YP_003608019.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_5907 FAD dependent oxidoreductase YP_003608020.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: bpy:Bphyt_5906 protein of unknown function DUF861 cupin_3 YP_003608021.1 KEGG: GL25107 gene product from transcript GL25107-RA YP_003608022.1 KEGG: bph:Bphy_6588 oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003608023.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_6589 binding-protein-dependent transport systems inner membrane component YP_003608024.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_6590 binding-protein-dependent transport systems inner membrane component YP_003608025.1 PFAM: extracellular solute-binding protein family 5; KEGG: bph:Bphy_6591 extracellular solute-binding protein YP_003608026.1 PFAM: FAD dependent oxidoreductase; KEGG: bph:Bphy_6592 FAD dependent oxidoreductase YP_003608027.1 KEGG: bph:Bphy_6593 haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_003608028.1 PFAM: aldehyde dehydrogenase; KEGG: bph:Bphy_6594 aldehyde dehydrogenase YP_003608029.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B1491 hypothetical protein YP_003608030.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bxe:Bxe_B1490 D-isomer specific 2-hydroxyacid dehydrogenase YP_003608031.1 PFAM: aminotransferase class-III; KEGG: bph:Bphy_6568 hypothetical protein YP_003608032.1 KEGG: bpy:Bphyt_6096 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003608033.1 TIGRFAM: tartrate dehydrogenase; KEGG: bph:Bphy_6571 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003608034.1 KEGG: bph:Bphy_6572 aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003608035.1 PFAM: succinylglutamate desuccinylase/aspartoacylase; KEGG: bph:Bphy_6573 succinylglutamate desuccinylase/aspartoacylase YP_003608036.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mmw:Mmwyl1_3081 pyridoxal-5'-phosphate-dependent protein beta subunit YP_003608037.1 KEGG: mmw:Mmwyl1_3082 ornithine cyclodeaminase; PFAM: ornithine cyclodeaminase/mu-crystallin YP_003608038.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bpy:Bphyt_4342 lysine exporter protein (LysE/YggA) YP_003608039.1 KEGG: bxe:Bxe_B0671 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003608040.1 PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B0670 beta alanine--pyruvate transaminase YP_003608041.1 KEGG: bmj:BMULJ_01535 transcription elongation factor YP_003608042.1 KEGG: bxe:Bxe_B0668 hypothetical protein YP_003608043.1 PFAM: extracellular ligand-binding receptor; KEGG: bpy:Bphyt_4333 extracellular ligand-binding receptor YP_003608044.1 KEGG: bxe:Bxe_B0660 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003608045.1 KEGG: bpy:Bphyt_4328 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003608046.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_4327 inner-membrane translocator YP_003608047.1 KEGG: bpy:Bphyt_0372 hypothetical protein YP_003608048.1 KEGG: bpy:Bphyt_0371 hypothetical protein YP_003608049.1 KEGG: bpy:Bphyt_0371 hypothetical protein YP_003608050.1 KEGG: smd:Smed_0214 hypothetical protein YP_003608051.1 TIGRFAM: 4-carboxymuconolactone decarboxylase; KEGG: bpy:Bphyt_4316 4-carboxymuconolactone decarboxylase; PFAM: carboxymuconolactone decarboxylase YP_003608052.1 KEGG: bpy:Bphyt_4315 3-oxoadipate enol-lactonase; TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold YP_003608053.1 KEGG: bpy:Bphyt_4314 3-carboxy-cis,cis-muconate cycloisomerase; TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; adenylosuccinate lyase-like YP_003608054.1 TIGRFAM: 3-oxoacid CoA-transferase subunit beta; KEGG: bxe:Bxe_B0644 butyryl-CoA:acetate CoA transferase; PFAM: coenzyme A transferase YP_003608055.1 TIGRFAM: 3-oxoacid CoA-transferase, subunit alpha; KEGG: bpy:Bphyt_4312 3-oxoacid CoA-transferase, subunit alpha; PFAM: coenzyme A transferase YP_003608056.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B0642 LysR family transcriptional regulator YP_003608057.1 TIGRFAM: GTP cyclohydrolase I; KEGG: bpy:Bphyt_4310 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase YP_003608058.1 KEGG: bpy:Bphyt_4308 DedA-like transmembrane protein YP_003608059.1 SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: bxe:Bxe_B0638 diguanylate cyclase; PFAM: GGDEF domain containing protein; Cache domain protein YP_003608060.1 PFAM: CHAD domain containing protein; KEGG: bpy:Bphyt_4307 CHAD domain containing protein YP_003608061.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_4306 short chain dehydrogenase YP_003608062.1 PFAM: phosphate transporter; KEGG: bpy:Bphyt_4305 phosphate transporter YP_003608063.1 PFAM: protein of unknown function DUF344; KEGG: bxe:Bxe_B0632 hypothetical protein YP_003608064.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B0631 hypothetical protein YP_003608065.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bxe:Bxe_B0630 serine protease; SMART: PDZ/DHR/GLGF domain protein YP_003608066.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0628 major facilitator superfamily multidrug efflux transporter YP_003608067.1 KEGG: bpy:Bphyt_4299 hypothetical protein YP_003608068.1 KEGG: bpy:Bphyt_4298 hypothetical protein YP_003608069.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B0625 2OG-Fe(II) oxygenase family oxidoreductase YP_003608070.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bxe:Bxe_B0624 hypothetical protein YP_003608071.1 KEGG: bpy:Bphyt_4295 hypothetical protein YP_003608072.1 KEGG: bxe:Bxe_B0621 hypothetical protein YP_003608073.1 KEGG: bxe:Bxe_B0619 hypothetical protein YP_003608074.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: bxe:Bxe_B0618 hypothetical protein YP_003608075.1 KEGG: bpy:Bphyt_4287 serine O-acetyltransferase YP_003608076.1 KEGG: bph:Bphy_4450 hypothetical protein YP_003608077.1 KEGG: bpy:Bphyt_4285 hypothetical protein YP_003608078.1 PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: bxe:Bxe_B0613 short chain dehydrogenase YP_003608079.1 KEGG: bpy:Bphyt_4283 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003608080.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_4282 binding-protein-dependent transport systems inner membrane component YP_003608081.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_4281 binding-protein-dependent transport systems inner membrane component YP_003608082.1 KEGG: bpy:Bphyt_4280 ABC transporter; PFAM: ABC transporter related; TOBE domain protein; SMART: ATPase AAA YP_003608083.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_4279 extracellular solute-binding protein family 1 YP_003608084.1 KEGG: bpy:Bphyt_4278 gluconolactonase; PFAM: SMP-30/gluconolaconase/LRE domain protein YP_003608085.1 KEGG: bph:Bphy_5401 hypothetical protein YP_003608086.1 KEGG: bpy:Bphyt_4277 transcriptional regulator, LuxR family; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_003608087.1 KEGG: bxe:Bxe_B0609 hypothetical protein YP_003608088.1 KEGG: bxe:Bxe_B0608 autoinducer synthesis protein; PFAM: autoinducer synthesis protein YP_003608089.1 KEGG: bpy:Bphyt_4274 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR family transcriptional regulator; SMART: regulatory protein GntR HTH YP_003608090.1 PFAM: UspA domain protein; KEGG: bpy:Bphyt_4273 UspA domain protein YP_003608091.1 KEGG: bxe:Bxe_B0606 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_003608092.1 PFAM: protein of unknown function DUF323; KEGG: bpy:Bphyt_4271 protein of unknown function DUF323 YP_003608093.1 PFAM: regulatory protein TetR; KEGG: mms:mma_1018 TetR family transcriptional regulator YP_003608094.1 PFAM: isochorismatase hydrolase; KEGG: mms:mma_1017 isochorismatase family protein YP_003608095.1 KEGG: Nodulation protein W, PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003608096.1 manually curated; PFAM: response regulator receiver; KEGG: two-component sensor histidine kinase bacteria, SMART: response regulator receiver YP_003608097.1 PFAM: alpha/beta hydrolase fold; KEGG: reh:H16_B1410 non-heme chloroperoxidase YP_003608098.1 KEGG: bmj:BMULJ_00215 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein YP_003608099.1 PFAM: Integrase catalytic region; KEGG: bte:BTH_I1930 transposase YP_003608100.1 PFAM: transposase IS3/IS911 family protein; KEGG: bvi:Bcep1808_7044 transposase IS3/IS911 family protein YP_003608101.1 KEGG: bvi:Bcep1808_3763 hypothetical protein YP_003608102.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_2342 LysR family transcriptional regulator YP_003608103.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_6696 short-chain dehydrogenase/reductase SDR YP_003608104.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_6695 LysR family transcriptional regulator YP_003608105.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; serine/threonine-protein kinase-like domain; GAF domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: bpt:Bpet3930 serine/threonine kinase protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; serine/threonine protein kinase; PAS domain containing protein; histidine kinase A domain protein YP_003608106.1 KEGG: bph:Bphy_4001 catalase; PFAM: catalase related subgroup; catalase domain protein YP_003608107.1 KEGG: ara:Arad_1000 transcriptional regulator protein; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_003608108.1 PFAM: cupin; KEGG: bpy:Bphyt_2343 cupin 2 conserved barrel domain protein YP_003608109.1 KEGG: bpy:Bphyt_2344 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase YP_003608110.1 KEGG: hypothetical protein YP_003608111.1 PFAM: cytochrome C class I; KEGG: bxe:Bxe_A4079 cytochrome C, class I YP_003608112.1 PFAM: cytochrome C oxidase subunit I; KEGG: bph:Bphy_0347 cytochrome C oxidase subunit I YP_003608113.1 PFAM: cytochrome C oxidase subunit II; KEGG: bxe:Bxe_A4077 cytochrome C oxidase subunit II YP_003608114.1 KEGG: bpy:Bphyt_0624 hypothetical protein YP_003608115.1 KEGG: bph:Bphy_0350 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome C class I YP_003608116.1 KEGG: bph:Bphy_0351 periplasmic cytochrome C protein YP_003608117.1 PFAM: isochorismatase hydrolase; KEGG: reh:H16_B1409 amidase related to nicotinamidase YP_003608118.1 KEGG: bac:BamMC406_4631 hypothetical protein YP_003608119.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet3925 LysR family transcriptional regulator YP_003608120.1 KEGG: bpy:Bphyt_4350 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003608122.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: Lung carbonyl reductase YP_003608123.1 KEGG: Nodulation protein W, PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003608124.1 manually curated; PFAM: response regulator receiver; KEGG: two-component sensor histidine kinase bacteria, SMART: response regulator receiver YP_003608125.1 PFAM: PEBP family protein; KEGG: bpy:Bphyt_2400 PEBP family protein YP_003608126.1 KEGG: bam:Bamb_5790 membrane protein-like protein YP_003608127.1 PFAM: alpha/beta hydrolase fold; KEGG: bac:BamMC406_6475 alpha/beta hydrolase fold YP_003608128.1 PFAM: MEKHLA domain protein; KEGG: bgl:bglu_2g18830 hypothetical protein YP_003608129.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_2341 NmrA family protein YP_003608130.1 KEGG: bpy:Bphyt_5731 beta-lactamase YP_003608131.1 PFAM: GLUG domain protein; KEGG: bph:Bphy_5862 filamentous haemagglutinin outer membrane protein YP_003608132.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bvi:Bcep1808_5399 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003608133.1 PFAM: cytochrome B561; KEGG: azc:AZC_1822 hydrogenase cytochrome b-type subunit protein YP_003608134.1 KEGG: bja:blr5909 hypothetical protein; PFAM: CHRD domain containing protein; SMART: CHRD domain containing protein YP_003608135.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bgl:bglu_2g02880 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003608136.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: bpy:Bphyt_2035 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003608137.1 PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A4327 branched chain amino acid ABC transporter periplasmic ligand-binding protein YP_003608138.1 PFAM: NUDIX hydrolase; KEGG: fre:Franean1_2614 NUDIX hydrolase YP_003608139.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bvi:Bcep1808_3358 lysine exporter protein LysE/YggA YP_003608140.1 KEGG: rhi:NGR_b21960 probable amino acid ABC transporter permease YP_003608141.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_4132 periplasmic binding protein/LacI transcriptional regulator YP_003608142.1 KEGG: bxe:Bxe_B0557 serine/threonine protein kinase; PFAM: tyrosine protein kinase; leucine-rich repeat protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; leucine-rich repeat-containing protein typical subtype YP_003608143.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; KEGG: bpy:Bphyt_4130 methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_003608144.1 KEGG: bxe:Bxe_B0555 hypothetical protein YP_003608145.1 KEGG: bpy:Bphyt_4127 allantoate amidohydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20 YP_003608146.1 KEGG: bxe:Bxe_B2287 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608147.1 KEGG: reu:Reut_B5792 hypothetical protein YP_003608148.1 KEGG: bvi:Bcep1808_5554 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003608149.1 KEGG: mpo:Mpop_3022 transcriptional regulator, TrmB; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003608150.1 KEGG: reu:Reut_B5769 outer membrane porin protein YP_003608151.1 PFAM: conserved hypothetical protein; KEGG: ctt:CtCNB1_1673 TctC YP_003608152.1 KEGG: bph:Bphy_1804 major facilitator transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_003608153.1 PFAM: extracellular solute-binding protein, family 7; KEGG: reu:Reut_B5806 TRAP dicarboxylate transporter-DctP subunit YP_003608154.1 PFAM: DoxX family protein; KEGG: bav:BAV0619 membrane protein YP_003608155.1 KEGG: reu:Reut_B5787 hypothetical protein YP_003608156.1 KEGG: bph:Bphy_5122 hypothetical protein YP_003608157.1 KEGG: reu:Reut_B5786 porin YP_003608159.1 KEGG: reu:Reut_B5795 hypothetical protein YP_003608160.1 KEGG: reu:Reut_B5794 hypothetical protein YP_003608161.1 KEGG: reu:Reut_B5795 hypothetical protein YP_003608162.1 KEGG: reu:Reut_B5794 hypothetical protein YP_003608163.1 KEGG: reu:Reut_B5793 mandelate racemase/muconate lactonizing protein; manually curated; PFAM: mandelate racemase/muconate lactonizing protein YP_003608164.1 PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B5791 major facilitator transporter YP_003608165.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: reu:Reut_B5790 fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal:FAD dependent oxidoreductase YP_003608166.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: reu:Reut_B5789 Rieske (2Fe-2S) region YP_003608167.1 PFAM: amidohydrolase; KEGG: reu:Reut_B5784 amidohydrolase YP_003608168.1 PFAM: alcohol dehydrogenase GroES; alcohol dehydrogenase zinc-binding domain protein; KEGG: reu:Reut_B5783 L-threonine 3-dehydrogenase YP_003608169.1 PFAM: amidohydrolase; KEGG: reu:Reut_B5782 amidohydrolase YP_003608170.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: reu:Reut_B5781 Rieske (2Fe-2S) region YP_003608171.1 KEGG: reu:Reut_B5780 hypothetical protein YP_003608172.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: reu:Reut_B5779 hypothetical protein YP_003608173.1 KEGG: reu:Reut_B5778 BNR repeat-containing glycosyl hydrolase YP_003608174.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: reu:Reut_B5777 phthalate 4,5-dioxygenase YP_003608175.1 PFAM: amidohydrolase; KEGG: reu:Reut_B5776 amidohydrolase YP_003608176.1 PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: reu:Reut_B5775 protocatechuate 4,5-dioxygenase subunit beta YP_003608177.1 PFAM: dimethylmenaquinone methyltransferase; KEGG: reu:Reut_B5774 dimethylmenaquinone methyltransferase YP_003608178.1 PFAM: dimethylmenaquinone methyltransferase; KEGG: reu:Reut_B5773 dimethylmenaquinone methyltransferase YP_003608179.1 PFAM: dimethylmenaquinone methyltransferase; KEGG: reu:Reut_B5772 dimethylmenaquinone methyltransferase YP_003608180.1 KEGG: reu:Reut_B5770 flavin reductase-like, FMN-binding; manually curated; PFAM: flavin reductase domain protein FMN-binding YP_003608181.1 KEGG: reu:Reut_B5768 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR family transcriptional regulator; SMART: regulatory protein GntR HTH YP_003608182.1 KEGG: bpy:Bphyt_4121 carboxymethylenebutenolidase; PFAM: dienelactone hydrolase YP_003608183.1 PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_4118 porin gram-negative type YP_003608184.1 manually curated; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; KEGG: bpy:Bphyt_4104 drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003608185.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: app:CAP2UW1_3305 PpiC-type peptidyl-prolyl cis-trans isomerase YP_003608186.1 PFAM: glycoside hydrolase; KEGG: afw:Anae109_3267 beta-glucosidase YP_003608187.1 TIGRFAM: glucarate dehydratase; KEGG: bpy:Bphyt_4102 glucarate dehydratase; PFAM: mandelate racemase/muconate lactonizing protein YP_003608188.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4101 major facilitator superfamily MFS_1 YP_003608189.1 KEGG: bpy:Bphyt_4100 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003608190.1 KEGG: bpy:Bphyt_4081 hypothetical protein YP_003608191.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: bxe:Bxe_B0532 isocitrate dehydrogenase NADP-dependent, monomeric type; PFAM: isocitrate dehydrogenase NADP-dependent monomeric type YP_003608192.1 KEGG: ccs:CCNA_01039 hexuronate transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_003608193.1 KEGG: bph:Bphy_5674 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003608194.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B2323 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (MhpC) YP_003608195.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2324 3-hydroxyphenylpropionic transporter MhpT YP_003608196.1 KEGG: bxe:Bxe_B2325 4-hydroxy-2-ketovalerate aldolase; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein YP_003608197.1 TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: bxe:Bxe_B2326 acetaldehyde dehydrogenase; PFAM: acetaldehyde dehydrogenase ; semialdehyde dehydrogenase NAD - binding YP_003608198.1 KEGG: bxe:Bxe_B2327 2-hydroxypenta-2,4-dienoate hydratase(MhpD); PFAM: fumarylacetoacetate hydrolase YP_003608199.1 PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bxe:Bxe_B2328 3-(2,3-dihydroxyphenyl)propionate dioxygenase YP_003608200.1 PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_B2329 3-(3-hydroxyphenyl)propionate hydroxylase YP_003608201.1 KEGG: bxe:Bxe_B2330 DNA-binding transcriptional activator MhpR; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003608202.1 PFAM: Two-component sensor kinase domain protein; KEGG: bpy:Bphyt_4039 integral membrane sensor signal transduction histidine kinase YP_003608203.1 KEGG: bpy:Bphyt_4038 NMT1/THI5 like domain protein YP_003608204.1 KEGG: bpy:Bphyt_4037 histidine kinase; PFAM: Two-component sensor kinase domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003608205.1 KEGG: bxe:Bxe_B0496 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003608206.1 PFAM: NMT1/THI5 like domain protein; KEGG: bpy:Bphyt_4035 ABC nitrate/sulfonate/bicarbonate family transporter periplasmic ligand binding protein YP_003608207.1 KEGG: bxe:Bxe_B0494 nitrate/sulfonate/bicarbonate ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003608208.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_4033 binding-protein-dependent transport systems inner membrane component YP_003608209.1 KEGG: bxe:Bxe_B0492 hypotheticalprotein YP_003608210.1 PFAM: protein of unknown function DUF847; peptidoglycan binding domain; KEGG: bph:Bphy_6144 hypothetical protein YP_003608211.1 KEGG: bxe:Bxe_B0490 hypothetical protein YP_003608212.1 KEGG: sus:acid_7328 phospholipase C; PFAM: phosphoesterase YP_003608213.1 KEGG: bxe:Bxe_B0489 hypothetical protein YP_003608214.1 KEGG: bxe:Bxe_B0487 hypothetical protein YP_003608215.1 PFAM: Squalene/phytoene synthase; KEGG: bpy:Bphyt_4026 squalene/phytoene synthase YP_003608216.1 KEGG: bpy:Bphyt_4017 non-specific serine/threonine protein kinase; PFAM: KaiA binding YP_003608217.1 KEGG: bxe:Bxe_B0483 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003608218.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: bpy:Bphyt_4011 potassium-tellurite ethidium and proflavin transporter YP_003608219.1 KEGG: cak:Caul_4996 hypothetical protein YP_003608220.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B0481 LysR family transcriptional regulator YP_003608221.1 KEGG: bxe:Bxe_B0480 hypothetical protein YP_003608222.1 KEGG: bpy:Bphyt_4006 hypothetical protein YP_003608223.1 KEGG: bpy:Bphyt_4005 hypothetical protein YP_003608224.1 PFAM: protein phosphatase 2C-like; KEGG: bpy:Bphyt_4004 protein serine/threonine phosphatase; SMART: protein phosphatase 2C domain protein YP_003608225.1 KEGG: bpy:Bphyt_4003 sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; SMART: ATPase AAA YP_003608226.1 KEGG: bpy:Bphyt_4002 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: ABC transporter; peptidase C39 bacteriocin processing; cyclic nucleotide-binding; ABC transporter transmembrane region; SMART: ATPase AAA; cyclic nucleotide-binding YP_003608227.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bxe:Bxe_B0474 peptidyl-prolyl isomerase YP_003608228.1 PFAM: secretion protein HlyD; KEGG: bxe:Bxe_B0473 secretion protein HylD YP_003608229.1 KEGG: bpy:Bphyt_3999 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein YP_003608230.1 KEGG: bpy:Bphyt_3998 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003608231.1 KEGG: bpy:Bphyt_3997 hypothetical protein YP_003608232.1 KEGG: bxe:Bxe_B0469 hypothetical protein YP_003608233.1 KEGG: bxe:Bxe_B0468 hypothetical protein YP_003608234.1 PFAM: protein of unknown function DUF323; peptidase C14 caspase catalytic subunit p20; KEGG: bxe:Bxe_B0467 hypothetical protein YP_003608235.1 KEGG: bpy:Bphyt_3993 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain YP_003608236.1 KEGG: bxe:Bxe_B0463 hypothetical protein YP_003608237.1 KEGG: bpy:Bphyt_7241 hypothetical protein YP_003608238.1 KEGG: bpy:Bphyt_7233 hypothetical protein YP_003608239.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_7232 short-chain dehydrogenase/reductase SDR YP_003608240.1 KEGG: bpy:Bphyt_7225 hypothetical protein YP_003608241.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bmj:BMULJ_04199 threonine efflux protein YP_003608242.1 KEGG: bpy:Bphyt_7223 transcriptional regulator, AsnC family; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003608243.1 KEGG: bph:Bphy_5834 hypothetical protein YP_003608244.1 KEGG: bpy:Bphyt_6178 hypothetical protein YP_003608245.1 KEGG: bpy:Bphyt_6178 hypothetical protein YP_003608246.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_6173 alpha/beta hydrolase fold YP_003608247.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: mms:mma_3328 cytochrome C biogenesis protein YP_003608248.1 PFAM: redoxin; KEGG: bpy:Bphyt_4602 redoxin domain protein YP_003608249.1 KEGG: bph:Bphy_0904 hypothetical protein YP_003608250.1 PFAM: amidohydrolase; KEGG: rhi:NGR_c28580 amidohydrolase YP_003608251.1 PFAM: glycoside hydrolase; KEGG: bmj:BMULJ_04098 beta-glucosidase YP_003608252.1 PFAM: peptidase M23; KEGG: bam:Bamb_5107 peptidase M23B YP_003608253.1 KEGG: rpf:Rpic12D_0099 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003608254.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpi:Rpic_0092 GCN5-related N-acetyltransferase YP_003608255.1 KEGG: lhk:LHK_01333 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003608256.1 KEGG: bvi:Bcep1808_5855 amidohydrolase YP_003608257.1 PFAM: protein of unknown function UPF0126; KEGG: bvi:Bcep1808_5856 hypothetical protein YP_003608258.1 PFAM: type II secretion system F domain; KEGG: bpd:BURPS668_A3093 type II secretion system protein YP_003608259.1 PFAM: type II secretion system F domain; KEGG: bcj:BCAS0311 flp type pilus assembly protein YP_003608260.1 PFAM: type II secretion system protein E; KEGG: bac:BamMC406_6002 type II secretion system protein E YP_003608261.1 KEGG: bcj:BCAS0309 flp pilus type assembly-related protein YP_003608262.1 KEGG: bte:BTH_II2269 hypothetical protein YP_003608263.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: bvi:Bcep1808_6474 type II and III secretion system protein YP_003608264.1 KEGG: bpd:BURPS668_A3084 pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein YP_003608265.1 PFAM: peptidase A24A prepilin type IV; KEGG: bpd:BURPS668_A3082 peptidase A24A, prepilin type IV YP_003608266.1 PFAM: Flp/Fap pilin component; KEGG: bcm:Bcenmc03_6378 Flp/Fap pilin component YP_003608267.1 PFAM: Flp/Fap pilin component; KEGG: bcm:Bcenmc03_6378 Flp/Fap pilin component YP_003608268.1 KEGG: proteophosphoglycan 5 YP_003608269.1 KEGG: bam:Bamb_3430 hypothetical protein YP_003608270.1 PFAM: glycosyl transferase family 2; KEGG: bpd:BURPS668_A3075 glycosyl transferase, group 2 family protein YP_003608271.1 PFAM: methyltransferase type 12; KEGG: bte:BTH_II2259 generic methyltransferase YP_003608272.1 PFAM: GtrA family protein; KEGG: bch:Bcen2424_5873 GtrA family protein YP_003608273.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0434 major facilitator transporter YP_003608274.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bpy:Bphyt_7211 RpiR family transcriptional regulator YP_003608275.1 KEGG: bpy:Bphyt_7210 ABC transporter; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003608276.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_7209 short chain dehydrogenase YP_003608277.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_7208 extracellular solute-binding protein family 1 YP_003608278.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_7207 binding-protein-dependent transport systems inner membrane component YP_003608279.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_B0418 ABC sugar transporter inner membrane subunit YP_003608280.1 PFAM: protein of unknown function DUF1330; KEGG: bxe:Bxe_B0417 hypothetical protein YP_003608281.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bxe:Bxe_B0571 carbon-nitrogen hydrolase YP_003608282.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_4154 LysR family transcriptional regulator YP_003608283.1 PFAM: NHL repeat containing protein; KEGG: sus:acid_5622 NHL repeat-containing protein YP_003608284.1 PFAM: 17 kDa surface antigen; KEGG: bpy:Bphyt_7200 17 kDa surface antigen YP_003608285.1 KEGG: bpy:Bphyt_7198 metallophosphoesterase YP_003608286.1 KEGG: bpy:Bphyt_7196 hypothetical protein YP_003608287.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bpy:Bphyt_7195 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_003608288.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bph:Bphy_5595 periplasmic binding protein/LacI transcriptional regulator YP_003608289.1 PFAM: inner-membrane translocator; KEGG: bph:Bphy_5596 monosaccharide-transporting ATPase YP_003608290.1 KEGG: bph:Bphy_5597 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003608291.1 KEGG: bph:Bphy_5598 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003608292.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: bph:Bphy_5599 mandelate racemase/muconate lactonizing protein YP_003608293.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet0780 LysR family transcriptional regulator YP_003608294.1 PFAM: endoribonuclease L-PSP; KEGG: bbr:BB3184 hypothetical protein YP_003608295.1 PFAM: aminotransferase class V; KEGG: bgl:bglu_1g13550 probable class-V aminotransferase YP_003608296.1 KEGG: bph:Bphy_5685 D-cysteine desulfhydrase; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003608297.1 KEGG: RIFIN YP_003608298.1 PFAM: cytochrome C oxidase caa3-type, assembly factor CtaG-related; KEGG: nwi:Nwi_2311 hypothetical protein YP_003608299.1 KEGG: rpc:RPC_3847 hypothetical protein YP_003608300.1 PFAM: protein of unknown function DUF2231, transmembrane; KEGG: rpb:RPB_0157 hypothetical protein YP_003608301.1 manually curated; TIGRFAM: cytochrome C oxidase subunit II; KEGG: nwi:Nwi_2313 cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II YP_003608302.1 TIGRFAM: cytochrome C oxidase subunit I; KEGG: nwi:Nwi_2314 cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_003608303.1 KEGG: rpe:RPE_3867 hypothetical protein YP_003608304.1 PFAM: hypothetical protein; KEGG: cti:RALTA_A2143 conserved hypothetical protein; transmembrane protein YP_003608305.1 KEGG: eli:ELI_01405 hypothetical protein YP_003608306.1 PFAM: general substrate transporter; KEGG: bxe:Bxe_C0069 major facilitator superfamily metabolite/H(+) symporter YP_003608307.1 manually curated; KEGG: azo:azo0050 poly (3-hydroxybutyrate) depolymerase YP_003608308.1 KEGG: bxe:Bxe_C0068 isomerase; TIGRFAM: ectoine utilization protein EutA; PFAM: Asp/Glu/hydantoin racemase YP_003608309.1 KEGG: bxe:Bxe_C0067 polar amino acid ABC transporter inner membrane protein; TIGRFAM: ectoine/hydroxyectoine ABC transporter permease EhuD; polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003608310.1 KEGG: bxe:Bxe_C0066 polar amino acid ABC transporter inner membrane protein; TIGRFAM: ectoine/hydroxyectoine ABC transporter permease EhuC; polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003608311.1 TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bxe:Bxe_C0065 polar amino acid ABC transporter periplasmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_003608312.1 TIGRFAM: ectoine/hydroxyectoine ABC transporter ATP-binding protein; PFAM: ABC transporter; KEGG: bxe:Bxe_C0064 polar amino acid ABC transporter ATPase; SMART: ATPase AAA YP_003608313.1 KEGG: bxe:Bxe_C0063 peptidase; TIGRFAM: ectoine utilization protein EutD; PFAM: creatinase; peptidase M24 YP_003608314.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: bxe:Bxe_C0062 zinc-binding dehydrogenase YP_003608315.1 KEGG: bph:Bphy_0023 type VI secretion system Vgr family protein YP_003608316.1 KEGG: Lysozyme YP_003608318.1 PFAM: aminotransferase class-III; KEGG: bxe:Bxe_C0061 hypothetical protein YP_003608319.1 KEGG: bxe:Bxe_C0060 succinate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003608320.1 KEGG: bxe:Bxe_C0059 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003608321.1 KEGG: bxe:Bxe_C0058 hypothetical protein; TIGRFAM: ectoine utilization protein EutE; PFAM: succinylglutamate desuccinylase/aspartoacylase YP_003608322.1 TIGRFAM: ectoine utilization protein EutC; KEGG: bxe:Bxe_C0057 ectoine utilization protein EutC; PFAM: ornithine cyclodeaminase/mu-crystallin YP_003608323.1 KEGG: bxe:Bxe_C0056 threonine dehydratase; TIGRFAM: ectoine utilization protein EutB; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003608324.1 KEGG: bxe:Bxe_C0055 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003608325.1 KEGG: bph:Bphy_6298 hypothetical protein YP_003608326.1 PFAM: chromate transporter; KEGG: bpy:Bphyt_6228 chromate transporter YP_003608327.1 PFAM: chromate transporter; KEGG: bpy:Bphyt_6229 chromate transporter YP_003608328.1 KEGG: bpy:Bphyt_4745 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003608329.1 PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B2010 AcrB/AcrD/AcrF family cation efflux protein YP_003608330.1 PFAM: acriflavin resistance protein; KEGG: bxe:Bxe_B2009 AcrB/AcrD/AcrF family cation efflux protein YP_003608331.1 KEGG: bxe:Bxe_B2008 RND efflux system membrane fusion protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003608332.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bxe:Bxe_B0348 procollagen-proline,2-oxoglutarate-4-dioxygenase; SMART: prolyl 4-hydroxylase subunit alpha YP_003608333.1 KEGG: reh:H16_A3117 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_003608334.1 KEGG: rme:Rmet_2950 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_003608335.1 KEGG: cti:RALTA_A2594 sensor histidine kinase, repressor of PhcA; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003608336.1 PFAM: methyltransferase type 12; KEGG: rme:Rmet_2952 MCP methyltransferase, CheR-type YP_003608337.1 PFAM: protein of unknown function DUF2000; KEGG: bvi:Bcep1808_3367 hypothetical protein YP_003608338.1 KEGG: bam:Bamb_4421 AraC family transcriptional regulator; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608339.1 KEGG: bpy:Bphyt_2347 hypothetical protein YP_003608340.1 PFAM: isochorismatase hydrolase; KEGG: bph:Bphy_6682 isochorismatase hydrolase YP_003608341.1 PFAM: aldo/keto reductase; KEGG: sme:SMc01702 oxidoreductase protein YP_003608342.1 KEGG: cli:Clim_0599 polynucleotide phosphorylase/polyadenylase YP_003608343.1 KEGG: reh:H16_B0288 major facilitator superfamily transporter DHA2 family protein; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003608344.1 KEGG: bph:Bphy_7567 hypothetical protein; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_003608345.1 KEGG: bph:Bphy_5852 NUDIX hydrolase; manually curated; PFAM: NUDIX hydrolase YP_003608346.1 PFAM: CHAD domain containing protein; KEGG: bph:Bphy_5853 CHAD domain-containing protein YP_003608347.1 KEGG: mpt:Mpe_A0328 hypothetical protein YP_003608348.1 manually curated; KEGG: azo:azo2305 hypothetical protein YP_003608349.1 KEGG: rha:RHA1_ro01058 NADPH:quinone reductase YP_003608350.1 PFAM: acyltransferase 3; KEGG: bpm:BURPS1710b_A1805 O-antigen acetylase YP_003608352.1 KEGG: bpy:Bphyt_4199 hypothetical protein YP_003608353.1 KEGG: aba:acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003608354.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3408 short-chain dehydrogenase/reductase SDR YP_003608355.1 PFAM: protein of unknown function DUF302; KEGG: aca:ACP_1217 hypothetical protein YP_003608356.1 PFAM: catalase related subgroup; KEGG: bid:Bind_3566 catalase domain-containing protein YP_003608357.1 KEGG: bja:bll6252 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608358.1 KEGG: bxe:Bxe_C1276 outer membrane autotransporter barrel protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin YP_003608359.1 KEGG: har:HEAR0549 hypothetical protein YP_003608360.1 KEGG: net:Neut_1124 hypothetical protein YP_003608361.1 KEGG: mno:Mnod_2532 hypothetical protein YP_003608362.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpf:Rpic12D_3911 LysR family transcriptional regulator YP_003608363.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: bam:Bamb_4057 alcohol dehydrogenase YP_003608364.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgl:bglu_1g22360 acetyltransferase YP_003608365.1 KEGG: bmj:BMULJ_00693 transporter YP_003608366.1 PFAM: alpha/beta hydrolase; KEGG: rlg:Rleg_3113 alpha/beta hydrolase YP_003608367.1 PFAM: transcriptional regulator; KEGG: bpy:Bphyt_6136 transcriptional regulator, winged helix family YP_003608368.1 KEGG: bam:Bamb_1277 hypothetical protein YP_003608369.1 PFAM: protein of unknown function DUF1275; KEGG: bac:BamMC406_5590 hypothetical protein YP_003608370.1 KEGG: bcj:BCAL1406 hypothetical protein YP_003608371.1 PFAM: DoxX family protein; KEGG: bcm:Bcenmc03_1375 DoxX family protein YP_003608372.1 PFAM: amidohydrolase; KEGG: bam:Bamb_5808 amidohydrolase 3 YP_003608373.1 KEGG: bac:BamMC406_5593 hypothetical protein; TIGRFAM: XapX domain protein; PFAM: protein of unknown function DUF1427 YP_003608374.1 PFAM: isochorismatase hydrolase; KEGG: bcj:BCAS0565 hydrolase, isochorismatase family YP_003608375.1 KEGG: bcj:BCAL2481 hypothetical protein; TIGRFAM: XapX domain protein; PFAM: protein of unknown function DUF1427 YP_003608376.1 KEGG: bgl:bglu_2g05230 hypothetical protein YP_003608377.1 PFAM: sodium/hydrogen exchanger; KEGG: bam:Bamb_1268 sodium/hydrogen exchanger YP_003608378.1 PFAM: pirin; KEGG: bam:Bamb_1266 pirin domain-containing protein YP_003608379.1 KEGG: bxe:Bxe_B2382 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003608380.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B1288 LysR family transcriptional regulator YP_003608381.1 PFAM: transcriptional regulator; KEGG: pfo:Pfl01_1958 transcriptional regulator YP_003608382.1 PFAM: cupin; KEGG: bcm:Bcenmc03_5343 cupin 2 domain-containing protein YP_003608383.1 KEGG: AFF2; AF4/FMR2 family, member 2 YP_003608384.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bch:Bcen2424_3222 LysR family transcriptional regulator YP_003608385.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_B3691 short-chain dehydrogenase/reductase SDR YP_003608386.1 PFAM: pirin; KEGG: bch:Bcen2424_3224 pirin domain-containing protein YP_003608387.1 KEGG: bac:BamMC406_4852 hypothetical protein YP_003608388.1 KEGG: bph:Bphy_3735 hypothetical protein YP_003608389.1 PFAM: methyltransferase type 11; KEGG: bpy:Bphyt_4338 O-methyltransferase family 3 YP_003608390.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bpy:Bphyt_4337 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003608391.1 KEGG: bpy:Bphyt_4336 hypothetical protein YP_003608392.1 KEGG: bxe:Bxe_A1388 sigma-24 (FecI); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003608393.1 KEGG: bxe:Bxe_C0819 polar amino acid ABC transporter periplasmic ligand-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003608394.1 PFAM: NHL repeat containing protein; KEGG: bph:Bphy_5305 hypothetical protein YP_003608395.1 KEGG: bxe:Bxe_B2093 hypothetical protein YP_003608396.1 PFAM: FAD dependent oxidoreductase; KEGG: bmj:BMULJ_04471 salicylate hydroxylase YP_003608397.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bam:Bamb_4041 LysR family transcriptional regulator YP_003608398.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pna:Pnap_3828 hypothetical protein YP_003608399.1 PFAM: rhodanese; KEGG: bpy:Bphyt_4191 beta-lactamase; SMART: rhodanese YP_003608400.1 KEGG: pol:Bpro_4841 peroxidase; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; peroxiredoxin-like YP_003608401.1 KEGG: bph:Bphy_2479 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase YP_003608402.1 manually curated; KEGG: bch:Bcen2424_6700 beta strand repeat-containing protein YP_003608403.1 KEGG: bxe:Bxe_A0772 haem catalase/peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase YP_003608404.1 KEGG: bgl:bglu_2g05180 hypothetical protein YP_003608405.1 PFAM: amidohydrolase; KEGG: bph:Bphy_5721 amidohydrolase 3 YP_003608406.1 PFAM: isochorismatase hydrolase; KEGG: bgl:bglu_2g05150 isochorismatase hydrolase YP_003608407.1 PFAM: transcriptional regulator; hypothetical protein; KEGG: bph:Bphy_5717 transcriptional regulator YP_003608408.1 KEGG: bph:Bphy_5716 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608409.1 PFAM: transcriptional regulator; KEGG: bpy:Bphyt_6136 transcriptional regulator, winged helix family YP_003608410.1 KEGG: ppf:Pput_5150 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003608411.1 KEGG: bxe:Bxe_A2884 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003608412.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; serine/threonine-protein kinase-like domain; PAS fold domain protein; histidine kinase A domain protein; KEGG: rlg:Rleg_5744 multi-sensor signal transduction multi-kinase; SMART: ATP-binding region ATPase domain protein; GAF domain protein; serine/threonine protein kinase; PAS domain containing protein; histidine kinase A domain protein YP_003608413.1 KEGG: bpy:Bphyt_6125 beta-lactamase YP_003608414.1 KEGG: bph:Bphy_5695 hypothetical protein YP_003608415.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_5814 alpha/beta hydrolase fold YP_003608416.1 KEGG: bph:Bphy_5727 hypothetical protein YP_003608417.1 KEGG: bgl:bglu_2g05210 hypothetical protein YP_003608418.1 PFAM: protein of unknown function DUF1275; KEGG: bph:Bphy_5725 hypothetical protein YP_003608419.1 KEGG: bph:Bphy_5724 hypothetical protein; TIGRFAM: XapX domain protein; PFAM: protein of unknown function DUF1427 YP_003608420.1 PFAM: transport-associated; KEGG: bmj:BMULJ_00693 transporter YP_003608421.1 PFAM: DoxX family protein; KEGG: bgl:bglu_2g05170 DoxX YP_003608422.1 PFAM: isochorismatase hydrolase; KEGG: bgl:bglu_2g05150 isochorismatase hydrolase YP_003608423.1 PFAM: alpha/beta hydrolase fold; KEGG: bgl:bglu_2g05140 alpha/beta hydrolase fold3 YP_003608424.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_5764 LysR family transcriptional regulator YP_003608425.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_6354 major facilitator transporter YP_003608426.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bxe:Bxe_A0455 (acyl-carrier protein) phosphodiesterase YP_003608427.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bpt:Bpet3930 serine/threonine kinase protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; GAF domain protein; histidine kinase A domain protein YP_003608428.1 KEGG: bph:Bphy_1156 glutamine ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003608429.1 manually curated; KEGG: bph:Bphy_6423 cytochrome b561 YP_003608430.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bph:Bphy_6422 oxidoreductase molybdopterin binding YP_003608431.1 KEGG: bph:Bphy_6421 hypothetical protein YP_003608432.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: bxe:Bxe_B0282 salicylyl-CoA 5-hydroxylase YP_003608433.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_7167 short-chain dehydrogenase/reductase SDR YP_003608434.1 KEGG: bxe:Bxe_B0280 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003608435.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_B0279 enoyl-CoA hydratase YP_003608436.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_B0278 acyl-CoA dehydrogenase YP_003608437.1 KEGG: bxe:Bxe_B0277 4-hydroxybenzoyl CoA thioesterase YP_003608438.1 PFAM: endoribonuclease L-PSP; KEGG: bpy:Bphyt_7162 endoribonuclease L-PSP YP_003608439.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_B0275 acid-coenzyme A ligase YP_003608440.1 PFAM: dienelactone hydrolase; protein of unknown function DUF1486; KEGG: bxe:Bxe_B0274 carboxymethylenebutenolidase YP_003608441.1 manually curated; KEGG: bxe:Bxe_B1609 hypothetical protein YP_003608442.1 KEGG: bpy:Bphyt_7158 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003608443.1 KEGG: bxe:Bxe_B0261 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608444.1 PFAM: general substrate transporter; KEGG: bph:Bphy_5847 major facilitator transporter YP_003608445.1 KEGG: ppg:PputGB1_1774 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608446.1 KEGG: bxe:Bxe_B0566 hypothetical protein YP_003608447.1 manually curated; KEGG: bxe:Bxe_B0250 GNAT family acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003608448.1 KEGG: bpy:Bphyt_7131 flavin reductase domain protein FMN-binding; manually curated; PFAM: flavin reductase domain protein FMN-binding YP_003608449.1 KEGG: bxe:Bxe_B0247 hypothetical protein YP_003608450.1 KEGG: bpy:Bphyt_7128 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003608451.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0245 GNAT family acetyltransferase YP_003608452.1 KEGG: bpy:Bphyt_7125 hypothetical protein YP_003608453.1 KEGG: bpy:Bphyt_5958 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003608454.1 KEGG: bpy:Bphyt_5959 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003608455.1 PFAM: acriflavin resistance protein; KEGG: bpy:Bphyt_5960 acriflavin resistance protein YP_003608456.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES; KEGG: bxe:Bxe_B0239 zinc-containing alcohol dehydrogenase YP_003608457.1 KEGG: bpy:Bphyt_7119 tranmembrane protein YP_003608458.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bpy:Bphyt_7118 lysine exporter protein (LysE/YggA) YP_003608459.1 KEGG: bpy:Bphyt_7116 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003608460.1 PFAM: YCII-related; KEGG: bxe:Bxe_B0232 hypothetical protein YP_003608461.1 PFAM: YCII-related; KEGG: bxe:Bxe_B0231 hypothetical protein YP_003608462.1 KEGG: bpy:Bphyt_7111 hypothetical protein YP_003608463.1 PFAM: protein of unknown function DUF1488; KEGG: bpy:Bphyt_7110 hypothetical protein YP_003608464.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpy:Bphyt_7108 GCN5-related N-acetyltransferase YP_003608465.1 PFAM: Dopa 45-dioxygenase; KEGG: bpy:Bphyt_7107 Dopa 45-dioxygenase YP_003608466.1 PFAM: High potential iron-sulfur protein; KEGG: bpy:Bphyt_7106 high potential iron-sulfur protein YP_003608467.1 PFAM: nitroreductase; KEGG: bxe:Bxe_B0222 nitroreductase YP_003608468.1 KEGG: bpy:Bphyt_7103 PepSY-associated TM helix domain protein YP_003608469.1 KEGG: bpy:Bphyt_7102 hydroxylase; PFAM: 2OG-Fe(II) oxygenase; SMART: prolyl 4-hydroxylase subunit alpha YP_003608470.1 KEGG: bxe:Bxe_B0218 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003608471.1 PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B0217 oxidoreductase YP_003608472.1 PFAM: PEBP family protein; KEGG: bpy:Bphyt_7099 PEBP family protein YP_003608473.1 KEGG: bch:Bcen2424_4336 cytoplasmic protein YP_003608474.1 KEGG: bcm:Bcenmc03_3185 hypothetical protein YP_003608475.1 KEGG: bpy:Bphyt_7098 ROK family protein; manually curated; PFAM: ROK family protein YP_003608476.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: bpy:Bphyt_7097 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003608477.1 KEGG: bpy:Bphyt_7096 hypothetical protein YP_003608478.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: bxe:Bxe_B0213 glycogen debranching protein YP_003608479.1 PFAM: dihydrodipicolinate synthetase; KEGG: bcm:Bcenmc03_3380 dihydrodipicolinate synthetase YP_003608480.1 PFAM: succinylglutamate desuccinylase/aspartoacylase; KEGG: bpy:Bphyt_7092 succinylglutamate desuccinylase/aspartoacylase YP_003608481.1 KEGG: bxe:Bxe_B0208 basic amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003608482.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B0207 LysR family transcriptional regulator YP_003608483.1 KEGG: bpy:Bphyt_7089 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_003608484.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_7088 DNA-binding transcriptional regulator LysR YP_003608485.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_7087 short chain dehydrogenase YP_003608486.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bpy:Bphyt_7086 rubredoxin-type Fe(Cys)4 protein YP_003608487.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bpy:Bphyt_7085 Rieske (2Fe-2S) domain protein YP_003608488.1 PFAM: glycosyl transferase family 2; KEGG: bpy:Bphyt_7084 glycosyl transferase family 2 YP_003608489.1 PFAM: cytochrome B561; KEGG: bpy:Bphyt_7083 cytochrome b561 YP_003608490.1 PFAM: regulatory protein TetR; AT hook, DNA-binding motif; KEGG: rec:RHECIAT_CH0001289 probable transcriptional regulator protein, TetR family YP_003608491.1 PFAM: glutathione S-transferase domain; KEGG: bja:blr7175 glutathione S-transferase-like protein YP_003608492.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1832 major facilitator superfamily drug efflux protein YP_003608493.1 KEGG: bac:BamMC406_4465 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_003608494.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_2958 short-chain dehydrogenase/reductase SDR YP_003608495.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cvi:CV_0270 LysR family transcriptional regulator YP_003608496.1 KEGG: ppg:PputGB1_3376 hypothetical protein YP_003608497.1 KEGG: bcm:Bcenmc03_6704 hypothetical protein YP_003608498.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_6698 LysR family transcriptional regulator YP_003608499.1 PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B5122 major facilitator transporter YP_003608500.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: bph:Bphy_6696 MlrC domain-containing protein YP_003608501.1 KEGG: bpy:Bphyt_6178 hypothetical protein YP_003608502.1 KEGG: sus:acid_2469 hypothetical protein YP_003608503.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_C1228 major facilitator superfamily anion(metabolite)/cation symporter YP_003608504.1 TIGRFAM: tartrate dehydrogenase; KEGG: bxe:Bxe_C1229 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003608505.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcj:BCAM0742 LysR family regulatory protein YP_003608506.1 manually curated; KEGG: bpy:Bphyt_0939 hypothetical protein YP_003608507.1 KEGG: reu:Reut_B4606 TRAP transporter solute receptor TAXI family protein YP_003608508.1 KEGG: bpy:Bphyt_7078 hypothetical protein YP_003608509.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0193 acetyltransferase YP_003608510.1 KEGG: bpy:Bphyt_7054 hypothetical protein YP_003608511.1 KEGG: bpy:Bphyt_7053 acid phosphatase; TIGRFAM: acid phosphatase; PFAM: phosphoesterase YP_003608512.1 KEGG: bpy:Bphyt_7051 hypothetical protein YP_003608513.1 KEGG: bph:Bphy_4118 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: extracellular endonuclease, subunit A YP_003608514.1 KEGG: bpy:Bphyt_7049 hypothetical protein YP_003608515.1 manually curated; PFAM: stage II sporulation E family protein; KEGG: bph:Bphy_5579 protein serine/threonine phosphatase; SMART: protein phosphatase 2C domain protein YP_003608516.1 KEGG: bgl:bglu_1g10780 hypothetical protein YP_003608517.1 PFAM: Domain of unknown function DUF1987; KEGG: bgl:bglu_1g10770 lipoprotein YP_003608518.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bgl:bglu_1g10760 diguanylate cyclase; SMART: GGDEF domain containing protein YP_003608519.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bxe:Bxe_A4032 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_003608520.1 KEGG: bpy:Bphyt_7047 hypothetical protein YP_003608521.1 KEGG: bpy:Bphyt_7046 hypothetical protein YP_003608522.1 PFAM: protein of unknown function DUF962; KEGG: bxe:Bxe_B0026 hypothetical protein YP_003608523.1 TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: bxe:Bxe_B0025 RarD protein YP_003608524.1 KEGG: bxe:Bxe_B0024 hypothetical protein; TIGRFAM: methyltransferase; PFAM: protein of unknown function DUF2260 YP_003608525.1 PFAM: acylphosphatase; KEGG: bpy:Bphyt_7041 acylphosphatase YP_003608526.1 KEGG: bxe:Bxe_B0022 hypothetical protein; TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_003608527.1 KEGG: bpy:Bphyt_7039 hypothetical protein YP_003608528.1 KEGG: bpy:Bphyt_7038 hopene-associated glycosyltransferase HpnB; TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2 YP_003608529.1 KEGG: bpy:Bphyt_7037 squalene synthase HpnC; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase YP_003608530.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: bpy:Bphyt_7036 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein YP_003608531.1 KEGG: bxe:Bxe_B0017 MoaA/NifB/PqqE family protein; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: radical SAM protein YP_003608532.1 PFAM: toluene tolerance protein; KEGG: bpy:Bphyt_7034 toluene tolerance protein YP_003608533.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: bxe:Bxe_B0015 hypothetical protein YP_003608534.1 PFAM: VacJ family lipoprotein; KEGG: bpy:Bphyt_7032 VacJ family lipoprotein YP_003608535.1 PFAM: thioesterase superfamily protein; KEGG: bpy:Bphyt_7031 thioesterase superfamily protein YP_003608536.1 KEGG: bpy:Bphyt_0466 periplasmic protein YP_003608537.1 KEGG: bac:BamMC406_1323 hypothetical protein YP_003608538.1 KEGG: bxe:Bxe_B0013 hypothetical protein; TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1 YP_003608539.1 TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; KEGG: bpy:Bphyt_7029 squalene-hopene cyclase; PFAM: prenyltransferase/squalene oxidase YP_003608540.1 KEGG: bpy:Bphyt_7028 squalene-associated FAD-dependent desaturase; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase YP_003608541.1 TIGRFAM: squalene synthase HpnD; KEGG: bxe:Bxe_B0010 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase YP_003608542.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: bxe:Bxe_B0009 diguanylate cyclase; SMART: GGDEF domain containing protein; PAS domain containing protein YP_003608543.1 PFAM: CheC domain protein; KEGG: bxe:Bxe_B0008 CheC, inhibitor of MCP methylation YP_003608544.1 KEGG: bpy:Bphyt_7024 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003608545.1 KEGG: hypothetical protein YP_003608546.1 KEGG: bpy:Bphyt_7023 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein YP_003608547.1 KEGG: bpy:Bphyt_7022 hypothetical protein YP_003608548.1 PFAM: NADPH-dependent FMN reductase; KEGG: bxe:Bxe_B0004 hypothetical protein YP_003608549.1 KEGG: bpy:Bphyt_7020 hypothetical protein YP_003608550.1 KEGG: bxe:Bxe_B0901 hypothetical protein YP_003608551.1 KEGG: bpy:Bphyt_7017 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003608552.1 KEGG: bpy:Bphyt_7016 hypothetical protein YP_003608553.1 PFAM: protein of unknown function DUF1272; KEGG: bxe:Bxe_B3033 hypothetical protein YP_003608554.1 TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: bpy:Bphyt_7013 aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_003608555.1 KEGG: bpy:Bphyt_7012 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase YP_003608556.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bpy:Bphyt_7011 cobyrinic acid ac-diamide synthase YP_003608557.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bxe:Bxe_B3027 ParB family protein; SMART: ParB domain protein nuclease YP_003608558.1 PFAM: initiator RepB protein; KEGG: bxe:Bxe_B3026 replication protein YP_003608559.1 KEGG: bpy:Bphyt_7008 hypothetical protein YP_003608560.1 PFAM: integrase family protein; KEGG: bpy:Bphyt_7007 integrase family protein YP_003608561.1 PFAM: protein of unknown function DUF2471; KEGG: bpy:Bphyt_7006 hypothetical protein YP_003608562.1 KEGG: bpy:Bphyt_7005 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_003608563.1 TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: bpy:Bphyt_7004 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II YP_003608564.1 KEGG: bxe:Bxe_B3020 L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: alcohol dehydrogenase GroES; alcohol dehydrogenase zinc-binding domain protein YP_003608565.1 PFAM: YceI family protein; KEGG: bpy:Bphyt_7002 YceI family protein YP_003608566.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_7001 TetR family transcriptional regulator YP_003608567.1 PFAM: protein of unknown function DUF1348; KEGG: bpy:Bphyt_7000 protein of unknown function DUF1348 YP_003608568.1 KEGG: bxe:Bxe_B3016 hypothetical protein YP_003608569.1 PFAM: general substrate transporter; KEGG: bac:BamMC406_3534 major facilitator transporter YP_003608570.1 PFAM: major facilitator superfamily MFS_1; KEGG: bac:BamMC406_3528 major facilitator transporter YP_003608571.1 PFAM: ferredoxin; oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bpy:Bphyt_2150 ferredoxin YP_003608572.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcj:BCAM2118 LysR family regulatory protein YP_003608573.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; Aromatic-ring-hydroxylating dioxygenase, subunit alpha-like; KEGG: bpy:Bphyt_2156 Rieske (2Fe-2S) domain protein YP_003608574.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: bpy:Bphyt_2157 aromatic-ring-hydroxylating dioxygenase beta subunit YP_003608575.1 KEGG: reh:H16_B0550 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_003608576.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; PAS fold domain protein; KEGG: bmj:BMULJ_03434 signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein YP_003608577.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: bpy:Bphyt_2161 acyl-CoA dehydrogenase type 2 domain YP_003608578.1 KEGG: bmj:BMULJ_03432 hypothetical protein YP_003608579.1 KEGG: bxe:Bxe_A2101 hypothetical protein YP_003608580.1 PFAM: amidase; KEGG: bxe:Bxe_A2100 Asp-tRNA Asn/Glu-tRNAGln amidotransferase subunit alpha YP_003608581.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgl:bglu_2g00890 short-chain dehydrogenase/reductase SDR YP_003608582.1 KEGG: bmu:Bmul_5088 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003608583.1 KEGG: bcm:Bcenmc03_3911 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; PFAM: flavin reductase domain protein FMN-binding YP_003608584.1 KEGG: bpy:Bphyt_4770 natural resistance-associated macrophage protein YP_003608585.1 KEGG: rpf:Rpic12D_4697 hypothetical protein YP_003608586.1 PFAM: transport-associated; KEGG: bpy:Bphyt_0799 transport-associated YP_003608587.1 KEGG: bxe:Bxe_B3015 MarR family transcriptional regulator YP_003608588.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_6980 short chain dehydrogenase YP_003608589.1 KEGG: bpy:Bphyt_6979 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608590.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bxe:Bxe_B3003 metal dependent phosphohydrolase YP_003608591.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_6978 LysR family transcriptional regulator YP_003608592.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpy:Bphyt_6977 L-carnitine dehydratase/bile acid-inducible protein F YP_003608593.1 PFAM: pyruvate carboxyltransferase; KEGG: bpy:Bphyt_6976 pyruvate carboxyltransferase YP_003608594.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_6975 major facilitator superfamily MFS_1 YP_003608595.1 KEGG: bpy:Bphyt_6960 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003608596.1 PFAM: aminotransferase class V; KEGG: bpy:Bphyt_6959 serine--glyoxylate transaminase YP_003608597.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_6958 major facilitator superfamily MFS_1 YP_003608598.1 manually curated; KEGG: bpy:Bphyt_6957 hydratase/decarboxylase YP_003608599.1 KEGG: bpy:Bphyt_6956 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase YP_003608600.1 KEGG: bpy:Bphyt_6955 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608601.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bpy:Bphyt_6954 protein of unknown function DUF6 transmembrane YP_003608602.1 PFAM: NHL repeat containing protein; KEGG: bpy:Bphyt_6951 NHL repeat containing protein YP_003608603.1 KEGG: bxe:Bxe_B2991 hypothetical protein YP_003608604.1 KEGG: bpy:Bphyt_6949 lysine exporter protein (LysE/YggA) YP_003608605.1 KEGG: bxe:Bxe_B2987 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003608606.1 KEGG: bxe:Bxe_B2986 DedA protein YP_003608607.1 KEGG: bpy:Bphyt_6944 hypothetical protein YP_003608608.1 PFAM: citrate transporter; KEGG: bpy:Bphyt_6939 citrate transporter YP_003608609.1 KEGG: bpy:Bphyt_6938 PAS modulated sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; hypothetical protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_003608610.1 KEGG: bpy:Bphyt_6937 hypothetical protein YP_003608611.1 KEGG: bpy:Bphyt_6936 hypothetical protein YP_003608612.1 PFAM: beta-lactamase; KEGG: bxe:Bxe_B2976 beta-lactamase class C and other penicillin binding proteins YP_003608613.1 KEGG: bpy:Bphyt_6934 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_003608614.1 KEGG: bpy:Bphyt_6925 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_003608615.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: bpy:Bphyt_6923 GCN5-related N-acetyltransferase YP_003608616.1 KEGG: bpy:Bphyt_6922 hypothetical protein YP_003608617.1 KEGG: bxe:Bxe_B2965 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003608618.1 KEGG: bpy:Bphyt_6915 pyridoxal 4-dehydrogenase; PFAM: aldo/keto reductase YP_003608619.1 PFAM: amidohydrolase; KEGG: bpy:Bphyt_6914 amidohydrolase YP_003608620.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_6913 short-chain dehydrogenase/reductase SDR YP_003608621.1 KEGG: bpy:Bphyt_6912 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate hydrolase YP_003608622.1 PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_B2953 phenylacetic acid degradation-related protein YP_003608623.1 KEGG: bpy:Bphyt_6908 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_003608624.1 KEGG: bpy:Bphyt_6907 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_003608625.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bxe:Bxe_B2949 isomerase YP_003608626.1 KEGG: bxe:Bxe_B2947 hypothetical protein YP_003608627.1 KEGG: bpy:Bphyt_6901 hypothetical protein YP_003608628.1 KEGG: histidine acid phosphatase family protein YP_003608629.1 KEGG: bxe:Bxe_B2945 hypothetical protein YP_003608630.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_6899 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_003608631.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bpy:Bphyt_6898 hypothetical protein YP_003608632.1 KEGG: bxe:Bxe_B2941 polyhydroxyalkanoate depolymerase; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_003608633.1 PFAM: glutathione S-transferase domain; KEGG: bpy:Bphyt_6895 glutathione S-transferase domain YP_003608634.1 KEGG: bpy:Bphyt_6894 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003608635.1 KEGG: bpy:Bphyt_6893 heavy metal translocating P-type ATPase; TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_003608636.1 PFAM: negative transcriptional regulator; KEGG: bxe:Bxe_B2937 negative transcriptional regulator YP_003608637.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: bpy:Bphyt_6891 protein of unknown function DUF1214 YP_003608638.1 PFAM: protein of unknown function DUF748; AsmA family protein; KEGG: bpy:Bphyt_6890 protein of unknown function DUF748 YP_003608639.1 KEGG: ypy:YPK_1246 hypothetical protein YP_003608641.1 KEGG: bpy:Bphyt_6863 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein YP_003608642.1 TIGRFAM: 2-methylcitrate dehydratase; KEGG: bxe:Bxe_B2902 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein YP_003608643.1 KEGG: bpy:Bphyt_6861 hypothetical protein YP_003608644.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: bxe:Bxe_B2900 methylcitrate synthase; PFAM: citrate synthase YP_003608645.1 PFAM: HpcH/HpaI aldolase; KEGG: bxe:Bxe_B2899 lyase YP_003608646.1 KEGG: bxe:Bxe_B2898 malate dehydrogenase; TIGRFAM: malate dehydrogenase; PFAM: lactate/malate dehydrogenase YP_003608647.1 KEGG: bpy:Bphyt_6857 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003608648.1 KEGG: bpy:Bphyt_6856 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_003608649.1 KEGG: bgl:bglu_2g08240 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit YP_003608650.1 KEGG: bxe:Bxe_B2893 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003608651.1 KEGG: bxe:Bxe_B2892 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_003608652.1 PFAM: protein of unknown function DUF339; KEGG: bxe:Bxe_B2891 hypothetical protein YP_003608653.1 TIGRFAM: citrate synthase I; KEGG: bpy:Bphyt_6851 type II citrate synthase; PFAM: citrate synthase YP_003608654.1 KEGG: bpy:Bphyt_6850 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein YP_003608655.1 PFAM: entericidin EcnAB; KEGG: bpy:Bphyt_6849 entericidin EcnAB YP_003608656.1 KEGG: bph:Bphy_4368 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein YP_003608657.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: bxe:Bxe_B2887 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003608658.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: bpy:Bphyt_6846 aspartate-semialdehyde dehydrogenase; PFAM: semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD - binding YP_003608659.1 TIGRFAM: FimV C-terminal domain; KEGG: bxe:Bxe_B2884 hypothetical protein YP_003608660.1 TIGRFAM: tRNA pseudouridine synthase A; KEGG: bpy:Bphyt_6844 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_003608661.1 KEGG: bpy:Bphyt_6843 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_003608662.1 KEGG: bxe:Bxe_B2881 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase subunit beta; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003608663.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bpy:Bphyt_6841 DNA methylase N-4/N-6 domain protein YP_003608664.1 TIGRFAM: tryptophan synthase, subunit alpha; KEGG: bpy:Bphyt_6840 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain YP_003608665.1 KEGG: bpy:Bphyt_6839 acetyl-CoA carboxylase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase YP_003608666.1 KEGG: bxe:Bxe_B2877 folylpolyglutamate synthetase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein YP_003608667.1 PFAM: sporulation domain protein; KEGG: bxe:Bxe_B2876 hypothetical protein YP_003608668.1 PFAM: colicin V production protein; KEGG: bpy:Bphyt_6836 colicin V production protein YP_003608669.1 KEGG: bxe:Bxe_B2874 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_003608670.1 KEGG: bxe:Bxe_B2872 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_003608671.1 KEGG: bpy:Bphyt_6832 peptidylprolyl isomerase FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type YP_003608672.1 KEGG: bxe:Bxe_B2870 histidine kinase; PFAM: histidine kinase A domain protein; SMART: histidine kinase A domain protein YP_003608673.1 KEGG: bpy:Bphyt_6830 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein YP_003608674.1 TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase; KEGG: bpy:Bphyt_6827 malto-oligosyltrehalose synthase; SMART: alpha amylase catalytic sub domain YP_003608675.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: bpy:Bphyt_6826 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_003608676.1 TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase; glycoside hydrolase family 13 domain protein; KEGG: bxe:Bxe_B2865 trehalose trehalohydrolase; SMART: alpha amylase catalytic sub domain YP_003608677.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase; KEGG: bpy:Bphyt_6824 glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain YP_003608678.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase; KEGG: bxe:Bxe_B2863 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain YP_003608679.1 TIGRFAM: trehalose synthase; trehalose synthase-fused maltokinase; PFAM: alpha amylase; aminoglycoside phosphotransferase; KEGG: bpy:Bphyt_6822 trehalose synthase; SMART: alpha amylase catalytic sub domain YP_003608680.1 KEGG: bxe:Bxe_B2861 alpha-amylase-related protein; PFAM: alpha amylase; SMART: alpha amylase catalytic sub domain YP_003608681.1 PFAM: protein of unknown function DUF1345; KEGG: bpy:Bphyt_6820 protein of unknown function DUF1345 YP_003608682.1 KEGG: bpy:Bphyt_6819 hypothetical protein YP_003608683.1 PFAM: FAD dependent oxidoreductase; glucose-methanol-choline oxidoreductase; KEGG: bpy:Bphyt_6818 glucose-methanol-choline oxidoreductase YP_003608684.1 KEGG: bpy:Bphyt_6817 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome C class I YP_003608685.1 PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B2858 serine/threonine protein phosphatase YP_003608686.1 PFAM: RES domain protein; KEGG: bpy:Bphyt_6815 RES domain protein YP_003608687.1 KEGG: bpy:Bphyt_6814 hypothetical protein YP_003608688.1 KEGG: bxe:Bxe_B2855 hypothetical protein YP_003608689.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B2854 LysR family transcriptional regulator YP_003608690.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bxe:Bxe_B2853 hypothetical protein YP_003608691.1 KEGG: bxe:Bxe_B0304 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003608692.1 KEGG: rpf:Rpic12D_5346 protein-tyrosine phosphatase, low molecular weight; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_003608693.1 KEGG: bmj:BMULJ_05805 ACR3 family arsenite transporter; TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter YP_003608694.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nha:Nham_4433 secreted protein YP_003608695.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0211 major facilitator superfamily MFS_1 YP_003608696.1 KEGG: bac:BamMC406_2259 hypothetical protein YP_003608697.1 PFAM: TOBE domain protein; regulatory protein LysR; KEGG: bxe:Bxe_B2851 ModE family transcriptional regulator YP_003608698.1 KEGG: bxe:Bxe_B2850 ABC molybdate transporter ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_003608699.1 KEGG: bpy:Bphyt_6805 molybdate ABC transporter inner membrane subunit; TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003608700.1 KEGG: bpy:Bphyt_6804 molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003608701.1 KEGG: bxe:Bxe_B2847 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003608702.1 KEGG: bpy:Bphyt_6802 esterase, PHB depolymerase family; TIGRFAM: esterase, PHB depolymerase family; PFAM: esterase PHB depolymerase YP_003608703.1 KEGG: bxe:Bxe_B2845 hypothetical protein YP_003608704.1 PFAM: TspO/MBR family protein; KEGG: bpy:Bphyt_6800 TspO and MBR like protein YP_003608705.1 KEGG: bpy:Bphyt_6799 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_003608706.1 KEGG: bxe:Bxe_B2843 organic hydroperoxide resistance protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_003608707.1 KEGG: bxe:Bxe_B2842 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003608708.1 KEGG: bxe:Bxe_B2841 transmembrane protein YP_003608709.1 TIGRFAM: homoserine kinase; KEGG: bpy:Bphyt_6795 homoserine kinase; PFAM: aminoglycoside phosphotransferase YP_003608710.1 KEGG: bxe:Bxe_B2839 hypothetical protein YP_003608711.1 TIGRFAM: AMP nucleosidase; KEGG: bpy:Bphyt_6793 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1 YP_003608712.1 KEGG: bpy:Bphyt_6791 chromate transporter YP_003608713.1 KEGG: bxe:Bxe_B2835 hypothetical protein; manually curated; PFAM: conserved hypothetical protein YP_003608714.1 SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; TIGRFAM: DNA polymerase I; KEGG: bpy:Bphyt_6788 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease YP_003608715.1 KEGG: bpy:Bphyt_6787 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003608716.1 KEGG: bxe:Bxe_B2832 dienelactone hydrolase; PFAM: dienelactone hydrolase YP_003608717.1 KEGG: bpy:Bphyt_6785 rhodanese domain protein; PFAM: rhodanese; SMART: rhodanese YP_003608718.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bxe:Bxe_B2830 osmotic adaptation-related protein YP_003608719.1 KEGG: bpy:Bphyt_6783 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit YP_003608720.1 PFAM: polyprenyl synthetase; KEGG: bxe:Bxe_B2828 farnesyl-diphosphate synthase YP_003608721.1 KEGG: bpy:Bphyt_6781 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase central region; transketolase YP_003608722.1 PFAM: protein of unknown function DUF198; KEGG: bpy:Bphyt_6780 GTP cyclohydrolase YP_003608723.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: bpy:Bphyt_6779 DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease YP_003608724.1 PFAM: HI0933 family protein; KEGG: bxe:Bxe_B2824 HI0933-like protein YP_003608725.1 KEGG: bxe:Bxe_B2823 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_003608726.1 PFAM: protein of unknown function; KEGG: bpy:Bphyt_6776 hypothetical protein YP_003608727.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase, DnaB-helicase binding domain; KEGG: bpy:Bphyt_6775 DNA primase; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; DNA primase DnaG DnaB-binding YP_003608728.1 KEGG: bxe:Bxe_B2820 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_003608729.1 KEGG: bxe:Bxe_C0209 hypothetical protein YP_003608730.1 PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_6772 porin gram-negative type YP_003608731.1 KEGG: bpy:Bphyt_6770 transposase YP_003608732.1 PFAM: cyclic nucleotide-binding; KEGG: bxe:Bxe_B2783 cyclic nucleotide-binding domain-containing protein YP_003608733.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bpy:Bphyt_6767 acyl-CoA synthetase YP_003608734.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bpy:Bphyt_6764 lysine exporter protein (LysE/YggA) YP_003608735.1 KEGG: bxe:Bxe_B2777 hypothetical protein YP_003608736.1 TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; KEGG: bpy:Bphyt_6761 protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase YP_003608737.1 KEGG: bpy:Bphyt_6760 protocatechuate 3,4-dioxygenase, subunit beta; TIGRFAM: protocatechuate 3,4-dioxygenase subunit beta; PFAM: intradiol ring-cleavage dioxygenase YP_003608738.1 KEGG: bpy:Bphyt_6759 transcriptional regulator, LysR family; TIGRFAM: pca operon transcription factor PcaQ; PFAM: LysR substrate-binding; regulatory protein LysR YP_003608739.1 KEGG: bxe:Bxe_B2773 4-hydroxyphenylpyruvate dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003608740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_6757 LysR family transcriptional regulator YP_003608741.1 KEGG: bxe:Bxe_B2771 hypothetical protein YP_003608742.1 KEGG: bpy:Bphyt_6755 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase; protein of unknown function DUF224 cysteine-rich region domain protein YP_003608743.1 KEGG: bxe:Bxe_B2769 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_003608744.1 KEGG: bxe:Bxe_B0568 hypothetical protein YP_003608745.1 KEGG: bpy:Bphyt_4105 hypothetical protein YP_003608746.1 KEGG: bpy:Bphyt_6636 hypothetical protein YP_003608747.1 KEGG: bpy:Bphyt_6635 aldose 1-epimerase; PFAM: aldose 1-epimerase YP_003608748.1 KEGG: bxe:Bxe_B2623 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608749.1 TIGRFAM: xylose isomerase; KEGG: bxe:Bxe_B2622 xylose isomerase; PFAM: xylose isomerase YP_003608750.1 KEGG: bxe:Bxe_B2621 ABC xylose transporter periplasmic ligand binding protein; TIGRFAM: D-xylose ABC transporter periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator YP_003608751.1 TIGRFAM: D-xylose ABC transporter ATPase; PFAM: ABC transporter; KEGG: bpy:Bphyt_6631 xylose transporter ATP-binding subunit; SMART: ATPase AAA YP_003608752.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_6630 monosaccharide-transporting ATPase YP_003608753.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bxe:Bxe_B2617 isoquinoline 1-oxidoreductase subunit beta YP_003608754.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_B2616 isoquinoline 1-oxidoreductase, subunit alpha YP_003608755.1 KEGG: bxe:Bxe_B2615 aromatic acid efflux system NodT family outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003608756.1 KEGG: bpy:Bphyt_6625 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003608757.1 PFAM: protein of unknown function DUF1656; KEGG: bpy:Bphyt_6624 protein of unknown function DUF1656 YP_003608758.1 PFAM: fusaric acid resistance protein conserved region; KEGG: bpy:Bphyt_6623 fusaric acid resistance protein conserved region YP_003608759.1 KEGG: bxe:Bxe_B2611 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003608760.1 KEGG: bpy:Bphyt_6621 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003608761.1 PFAM: KaiA binding; Circadian clock protein KaiC central region; KEGG: bxe:Bxe_B2609 hypothetical protein; SMART: ATPase AAA YP_003608762.1 KEGG: bxe:Bxe_B2603 hypothetical protein YP_003608763.1 PFAM: phosphoglycerate mutase; KEGG: bpy:Bphyt_6613 phosphoglycerate mutase YP_003608764.1 KEGG: bpy:Bphyt_6612 hypothetical protein YP_003608765.1 KEGG: bxe:Bxe_B2600 hypothetical protein YP_003608766.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: bxe:Bxe_B2765 Mg2+ transporter protein, CorA-like YP_003608767.1 PFAM: oxidoreductase FAD-binding domain protein; globin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bxe:Bxe_B2333 nitric oxide dioxygenase YP_003608768.1 KEGG: bpy:Bphyt_6163 anaerobic nitric oxide reductase transcription regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: ATPase AAA; GAF domain protein YP_003608769.1 KEGG: bpy:Bphyt_6604 hypothetical protein YP_003608770.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpy:Bphyt_6603 acyl-CoA dehydrogenase domain protein YP_003608771.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_B2583 CaiB/BaiF family protein YP_003608772.1 PFAM: MmgE/PrpD family protein; KEGG: bpy:Bphyt_6601 MmgE/PrpD family protein YP_003608773.1 KEGG: bpy:Bphyt_6600 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase YP_003608774.1 KEGG: scl:sce4884 xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 43 YP_003608775.1 PFAM: major facilitator superfamily MFS_1; KEGG: dsy:DSY4350 hypothetical protein YP_003608776.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcm:Bcenmc03_6414 LysR family transcriptional regulator YP_003608777.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: bxe:Bxe_B0294 diguanylate cyclase; SMART: GGDEF domain containing protein; PAS domain containing protein YP_003608778.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_6599 major facilitator superfamily MFS_1 YP_003608779.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B2579 LysR family transcriptional regulator YP_003608780.1 PFAM: aldehyde dehydrogenase; KEGG: bxe:Bxe_B2578 aldehyde dehydrogenase family protein YP_003608781.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_6595 FAD dependent oxidoreductase YP_003608782.1 PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_B2576 aminotransferase YP_003608783.1 PFAM: protein of unknown function DUF898 transmembrane; KEGG: gbe:GbCGDNIH1_1250 hypothetical protein YP_003608784.1 KEGG: bpy:Bphyt_6584 RNA polymerase, sigma 70 subunit, RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_003608785.1 KEGG: bpy:Bphyt_6576 hypothetical protein YP_003608786.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: bxe:Bxe_B2560 hypothetical protein YP_003608787.1 TIGRFAM: dihydroxyacetone kinase, DhaK subunit; dihydroxyacetone kinase, L subunit; KEGG: bpy:Bphyt_6567 dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase; Dak phosphatase YP_003608788.1 manually curated; KEGG: bpy:Bphyt_6566 hypothetical protein YP_003608789.1 PFAM: permease; KEGG: bxe:Bxe_B2557 membrane protein, YraQ-like YP_003608790.1 KEGG: bxe:Bxe_B2556 tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein YP_003608791.1 KEGG: bpy:Bphyt_6563 selenophosphate synthetase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003608792.1 KEGG: bpy:Bphyt_6562 beta-xylosidase YP_003608793.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: bxe:Bxe_B2554 formate dehydrogenase-O, major subunit YP_003608794.1 KEGG: bxe:Bxe_B2553 formate dehydrogenase alpha subunit; TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_003608795.1 KEGG: bpy:Bphyt_6559 formate dehydrogenase, beta subunit; TIGRFAM: formate dehydrogenase subunit beta; PFAM: formate dehydrogenase transmembrane domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003608796.1 TIGRFAM: formate dehydrogenase, subunit gamma; KEGG: bxe:Bxe_B2551 formate dehydrogenase subunit gamma YP_003608797.1 KEGG: bxe:Bxe_B2550 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein YP_003608798.1 TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: bxe:Bxe_B2549 selenocysteine synthase; PFAM: pyridoxal phosphate-dependent transferase YP_003608799.1 KEGG: bpy:Bphyt_6555 selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3 YP_003608800.1 PFAM: integrase family protein; KEGG: bpy:Bphyt_6554 integrase family protein YP_003608801.1 PFAM: protein of unknown function DUF91; KEGG: bvi:Bcep1808_1998 hypothetical protein YP_003608802.1 PFAM: major facilitator superfamily MFS_1; KEGG: cti:RALTA_B0824 permease transmembrane protein; major facilitator superfamily MFS_1 YP_003608803.1 PFAM: amidase; KEGG: nar:Saro_3602 amidase YP_003608804.1 KEGG: pol:Bpro_0580 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase YP_003608805.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pna:Pnap_2141 L-carnitine dehydratase/bile acid-inducible protein F YP_003608806.1 manually curated; KEGG: bpa:BPP0616 hypothetical protein YP_003608807.1 PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; KEGG: ctt:CtCNB1_3753 electron transfer flavoprotein, subunit alpha YP_003608808.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: dia:Dtpsy_3012 electron transfer flavoprotein alpha/beta-subunit YP_003608809.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbr:BB0619 acyl-CoA dehydrogenase YP_003608810.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB0618 LysR family regulatory protein YP_003608811.1 PFAM: porin Gram-negative type; KEGG: rpi:Rpic_2059 porin gram-negative type YP_003608812.1 PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_C6128 major facilitator transporter YP_003608813.1 KEGG: reu:Reut_B5049 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608814.1 PFAM: polysaccharide deacetylase; KEGG: azc:AZC_1491 polysaccharide deacetylase YP_003608815.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: bmj:BMULJ_05148 hypothetical protein YP_003608816.1 KEGG: mno:Mnod_5820 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; alpha-ketoglutarate dehydrogenase; PFAM: transketolase YP_003608817.1 KEGG: bxe:Bxe_A1771 nucleoside-diphosphate-sugar epimerase YP_003608818.1 PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0000638 probable transcriptional regulator protein, TetR family YP_003608819.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cak:Caul_3391 NADH:flavin oxidoreductase/NADH oxidase YP_003608820.1 KEGG: fre:Franean1_5674 amidohydrolase YP_003608822.1 KEGG: cyn:Cyan7425_2450 TetR family transcriptional regulator YP_003608823.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_4952 transposase IS3/IS911 family protein YP_003608824.1 KEGG: bxe:Bxe_A3839 cytochrome bd ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_003608825.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bxe:Bxe_A3840 cytochrome oxidase subunit I YP_003608826.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; KEGG: bxe:Bxe_A3841 oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_003608827.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bac:BamMC406_4617 formate dehydrogenase YP_003608828.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; serine/threonine-protein kinase-like domain; GAF domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bac:BamMC406_4616 PAS sensor protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; serine/threonine protein kinase; PAS domain containing protein; histidine kinase A domain protein YP_003608829.1 KEGG: bac:BamMC406_4615 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003608830.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bac:BamMC406_4639 short-chain dehydrogenase/reductase SDR YP_003608831.1 KEGG: bac:BamMC406_4636 major facilitator transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_003608832.1 KEGG: bac:BamMC406_4635 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003608833.1 PFAM: aldo/keto reductase; KEGG: bph:Bphy_3317 aldo/keto reductase YP_003608834.1 KEGG: sma:SAV_560 high-affinity nickel-transport protein; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter YP_003608835.1 KEGG: bac:BamMC406_4637 hypothetical protein YP_003608836.1 KEGG: bph:Bphy_5691 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003608837.1 KEGG: bph:Bphy_5693 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003608838.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bac:BamMC406_4634 short-chain dehydrogenase/reductase SDR YP_003608839.1 KEGG: bph:Bphy_5694 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003608840.1 KEGG: bvi:Bcep1808_3763 hypothetical protein YP_003608841.1 PFAM: alpha/beta hydrolase fold; KEGG: bac:BamMC406_4621 alpha/beta hydrolase fold YP_003608842.1 KEGG: bpy:Bphyt_1687 hypothetical protein YP_003608843.1 PFAM: alpha/beta hydrolase; KEGG: cpi:Cpin_3375 alpha/beta hydrolase-3 domain protein YP_003608844.1 PFAM: protein of unknown function DUF1348; KEGG: pol:Bpro_2653 hypothetical protein YP_003608845.1 PFAM: alpha/beta hydrolase; KEGG: bgl:bglu_2g00500 esterase/lipase/thioesterase YP_003608846.1 manually curated; PFAM: response regulator receiver; KEGG: bph:Bphy_5691 response regulator receiver protein; SMART: response regulator receiver YP_003608847.1 SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; manually curated; TIGRFAM: PAS sensor protein; KEGG: bph:Bphy_5692 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein YP_003608848.1 KEGG: bac:BamMC406_6414 Dyp-type peroxidase family protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_003608849.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: bam:Bamb_5666 Linocin_M18 bacteriocin protein YP_003608850.1 KEGG: hypothetical protein YP_003608851.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator; KEGG: bpy:Bphyt_5224 two component heavy metal response transcriptional regulator, winged helix family; SMART: response regulator receiver YP_003608852.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bpy:Bphyt_5223 heavy metal sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003608853.1 KEGG: bph:Bphy_7210 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003608854.1 KEGG: bph:Bphy_7211 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003608855.1 PFAM: acriflavin resistance protein; KEGG: bph:Bphy_7212 acriflavin resistance protein YP_003608856.1 KEGG: bph:Bphy_2375 hypothetical protein YP_003608857.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_5940 GCN5-related N-acetyltransferase YP_003608859.1 KEGG: cvi:CV_2959 hypothetical protein YP_003608860.1 KEGG: bpy:Bphyt_6644 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_003608861.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003608862.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hypothetical protein YP_003608863.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcm:Bcenmc03_4025 GCN5-related N-acetyltransferase YP_003608864.1 manually curated; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; KEGG: bpy:Bphyt_1446 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein YP_003608865.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bcm:Bcenmc03_1720 TonB-dependent receptor YP_003608866.1 KEGG: bxe:Bxe_A3000 TonB protein; TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein YP_003608867.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bvi:Bcep1808_4946 MotA/TolQ/ExbB proton channel YP_003608868.1 PFAM: biopolymertransporter ExbD/TolR; KEGG: bpy:Bphyt_1442 biopolymer transporter ExbD/TolR YP_003608869.1 PFAM: biopolymertransporter ExbD/TolR; KEGG: bch:Bcen2424_1714 biopolymer transporter ExbD/TolR YP_003608870.1 KEGG: bpy:Bphyt_1444 hypothetical protein YP_003608871.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_A2993 ABC peptide transporter periplasmic ligand binding protein YP_003608872.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bgl:bglu_2g22450 binding-protein-dependent transport systems inner membrane component YP_003608873.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A2991 ABC transporter inner membrane subunit YP_003608874.1 KEGG: bxe:Bxe_A2990 ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003608875.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bxe:Bxe_A2989 Zn-dependent protease modulator of DNA gyrase TldD YP_003608876.1 KEGG: bpy:Bphyt_1453 hypothetical protein YP_003608877.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A2987 ribosomal-protein-alanine GNAT family acetyltransferase YP_003608878.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpy:Bphyt_1455 GCN5-related N-acetyltransferase YP_003608879.1 KEGG: bxe:Bxe_A2985 RND family hydrophobe/amphiphile efflux pump; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003608881.1 KEGG: reu:Reut_C6032 hypothetical protein YP_003608882.1 KEGG: bam:Bamb_5171 hypothetical protein YP_003608883.1 KEGG: bph:Bphy_5978 type VI secretion protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein YP_003608884.1 KEGG: bph:Bphy_5979 EvpB family type VI secretion protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_003608885.1 PFAM: protein of unknown function DUF796; KEGG: bph:Bphy_5980 hypothetical protein YP_003608886.1 KEGG: bph:Bphy_5981 type VI secretion system lysozyme-related protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein YP_003608887.1 KEGG: bph:Bphy_5982 type VI secretion protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_003608888.1 KEGG: bph:Bphy_5983 type VI secretion protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_003608889.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA; ATPase AAA; Clp domain protein; Clp ATPase-like; KEGG: bph:Bphy_5984 type VI secretion ATPase; SMART: ATPase AAA YP_003608890.1 KEGG: bph:Bphy_5985 type VI secretion system Vgr family protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; Gp5 domain protein YP_003608891.1 KEGG: bph:Bphy_5986 hypothetical protein YP_003608892.1 KEGG: bph:Bphy_5987 hypothetical protein YP_003608893.1 KEGG: reh:H16_B2424 hypothetical protein YP_003608894.1 KEGG: bph:Bphy_5989 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003608895.1 PFAM: sodium:dicarboxylate symporter; KEGG: bph:Bphy_5990 sodium:dicarboxylate symporter YP_003608896.1 KEGG: bph:Bphy_5991 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003608897.1 PFAM: sodium:dicarboxylate symporter; KEGG: bph:Bphy_5992 sodium:dicarboxylate symporter YP_003608898.1 KEGG: bph:Bphy_5993 hypothetical protein YP_003608899.1 KEGG: bph:Bphy_5994 type VI secretion protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_003608900.1 PFAM: type IV / VI secretion system, DotU; KEGG: bph:Bphy_5995 hypothetical protein YP_003608901.1 KEGG: bph:Bphy_5996 IcmF-like protein YP_003608902.1 KEGG: bph:Bphy_5997 ImpA family type VI secretion-associated protein; TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein YP_003608903.1 KEGG: reu:Reut_A1713 hypothetical protein YP_003608904.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bba:Bd3614 hypothetical protein YP_003608905.1 KEGG: bph:Bphy_7181 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003608906.1 PFAM: conserved hypothetical protein; KEGG: bvi:Bcep1808_5449 hypothetical protein YP_003608907.1 PFAM: methyltransferase type 12; KEGG: bac:BamMC406_3314 methyltransferase type 11 YP_003608908.1 PFAM: peptidase M48 Ste24p; KEGG: ote:Oter_0245 peptidase M48 Ste24p YP_003608909.1 PFAM: LemA family protein; KEGG: dol:Dole_1528 LemA family protein YP_003608910.1 KEGG: xau:Xaut_3871 hypothetical protein YP_003608911.1 PFAM: NUDIX hydrolase; KEGG: bpy:Bphyt_4226 NUDIX hydrolase YP_003608912.1 PFAM: protein of unkown function DUF1796 papain-like cysteine peptidase; KEGG: met:M446_3114 hypothetical protein YP_003608913.1 KEGG: cti:RALTA_B1922 cyclic nucleotide-binding regulatory protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003608914.1 manually curated; KEGG: cti:RALTA_B1921 hypothetical protein; exported protein YP_003608915.1 KEGG: cti:RALTA_B1920 adenylate cyclase with CHASE2 domain; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase YP_003608916.1 KEGG: cti:RALTA_B1919 hypothetical protein YP_003608918.1 PFAM: glycosyl transferase group 1; KEGG: cti:RALTA_B1923 glycosyltransferase YP_003608919.1 PFAM: glycosyl transferase group 1; KEGG: cti:RALTA_B1924 glycosyltransferase YP_003608920.1 PFAM: methyltransferase type 11; KEGG: cti:RALTA_B1925 methyltransferase YP_003608921.1 KEGG: cti:RALTA_B1926 ABC-type transporter ATPase component, LPS efflux transporter; PFAM: ABC transporter; SMART: AAA ATPase YP_003608922.1 PFAM: ABC transporter; KEGG: cti:RALTA_B1927 ABC-2 type transporter permease, LPS efflux transporter YP_003608923.1 PFAM: glycosyl transferase group 1; KEGG: cti:RALTA_B1933 glycosyl transferase, group 1 YP_003608924.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: spe:Spro_1596 type I secretion system ATPase; SMART: ATPase AAA YP_003608925.1 KEGG: pfl:PFL_5375 ABC transporter periplasmic substrate-binding protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD YP_003608926.1 KEGG: pfl:PFL_3206 ABC transporter permease protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_003608927.1 KEGG: krh:KRH_22780 TetR family transcriptional regulator YP_003608928.1 KEGG: tdn:Suden_1716 hemolysin-type calcium-binding region YP_003608929.1 KEGG: mmi:MMAR_0162 hypothetical protein YP_003608930.1 PFAM: acyltransferase 3; KEGG: acr:Acry_1572 acyltransferase 3 YP_003608931.1 KEGG: cti:RALTA_B1310 hypothetical protein; membrane protein YP_003608932.1 KEGG: cti:RALTA_B1922 cyclic nucleotide-binding regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp YP_003608933.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bph:Bphy_5208 Ku protein; SMART: Ku domain protein YP_003608934.1 KEGG: bph:Bphy_5209 hypotheticalprotein; PFAM: hypotheticalprotein; SMART: Tetratricopeptide repeat YP_003608935.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bmj:BMULJ_05429 LysR family transcriptional regulator YP_003608936.1 PFAM: protein of unknown function DUF1348; KEGG: pfl:PFL_3262 hypothetical protein YP_003608937.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bcm:Bcenmc03_5250 FMN-dependent alpha-hydroxy acid dehydrogenase YP_003608938.1 PFAM: UspA domain protein; KEGG: bph:Bphy_6565 UspA domain-containing protein YP_003608939.1 KEGG: mfa:Mfla_1701 hypothetical protein YP_003608940.1 KEGG: acr:Acry_0319 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003608941.1 PFAM: inner-membrane translocator; KEGG: acr:Acry_0318 inner-membrane translocator YP_003608942.1 KEGG: acr:Acry_0317 ABC-type sugar transporter periplasmic component-like protein YP_003608944.1 PFAM: dienelactone hydrolase; KEGG: rme:Rmet_5282 dienelactone hydrolase YP_003608945.1 KEGG: bxe:Bxe_A0702 hypothetical protein YP_003608946.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bph:Bphy_5703 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_003608947.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bcm:Bcenmc03_7023 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_003608948.1 KEGG: bph:Bphy_5705 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome C class I YP_003608949.1 KEGG: cti:RALTA_A1560 transporter permease membrane region PF06826.2 (YidE/YbjL duplication); TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; TrkA-C domain protein YP_003608950.1 KEGG: cvi:CV_0979 protein-N p-phosphohistidine-sugar phosphotransferase; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site YP_003608951.1 KEGG: cvi:CV_0980 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIsubunit alpha; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_003608952.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_5698 major facilitator superfamily MFS_1 YP_003608953.1 KEGG: bph:Bphy_4481 hypothetical protein YP_003608954.1 KEGG: cti:RALTA_A0338 conserved hypothetical protein; peptidase, type 1 glutamine amidotransferase (GATase1)-like domain; TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain protein YP_003608955.1 KEGG: reu:Reut_B4874 regulatory protein, MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003608956.1 PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS02152 3-hydroxyphenylpropionic transporter MhpT YP_003608957.1 PFAM: amidohydrolase; KEGG: bvi:Bcep1808_3840 amidohydrolase YP_003608958.1 KEGG: bgl:bglu_2g10530 regulatory protein, MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003608959.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bmj:BMULJ_05315 p-hydroxycinnamoyl CoA hydratase/lyase YP_003608960.1 PFAM: aldehyde dehydrogenase; KEGG: bgl:bglu_2g10510 aldehyde dehydrogenase YP_003608961.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgl:bglu_2g10500 AMP-dependent synthetase and ligase YP_003608962.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bvi:Bcep1808_3844 acyl-CoA dehydrogenase domain-containing protein YP_003608963.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1429 short chain dehydrogenase YP_003608964.1 PFAM: protein of unknown function DUF344; KEGG: reh:H16_A1271 hypothetical protein YP_003608965.1 KEGG: cti:RALTA_B1537 hypothetical protein YP_003608966.1 KEGG: bph:Bphy_1051 lipoprotein YP_003608967.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: bph:Bphy_0644 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_003608968.1 KEGG: bph:Bphy_0645 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003608969.1 KEGG: bph:Bphy_0646 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003608970.1 KEGG: bcm:Bcenmc03_5988 PAS/PAC sensor signal transduction histidine kinase YP_003608971.1 KEGG: bph:Bphy_5503 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003608972.1 KEGG: bph:Bphy_0648 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_003608973.1 KEGG: bph:Bphy_5505 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003608974.1 KEGG: rme:Rmet_4089 hypothetical protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: paraquat-inducible protein A YP_003608975.1 PFAM: hypothetical protein; KEGG: rme:Rmet_4088 hypothetical protein YP_003608976.1 PFAM: protein of unknown function DUF330; KEGG: rme:Rmet_4087 hypothetical protein YP_003608977.1 KEGG: reu:Reut_A1201 hypothetical protein YP_003608978.1 KEGG: reu:Reut_A1202 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_003608979.1 KEGG: reu:Reut_A1203 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_003608980.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: avn:Avin_44040 FabI-like dehydrogenase/reductase YP_003608981.1 KEGG: bph:Bphy_5509 hypothetical protein YP_003608982.1 KEGG: reh:H16_A2156 hypothetical protein YP_003608983.1 KEGG: bph:Bphy_5013 hypothetical protein YP_003608984.1 KEGG: rme:Rmet_1704 hypothetical protein YP_003608985.1 KEGG: reu:Reut_B4586 hypothetical protein YP_003608986.1 KEGG: ppd:Ppro_0418 hypothetical protein YP_003608987.1 PFAM: sulfate transporter; sulfate transporter/antisigma-factor antagonist STAS; KEGG: app:CAP2UW1_1521 sulfate transporter YP_003608988.1 KEGG: bph:Bphy_0904 hypothetical protein YP_003608989.1 KEGG: bja:blr6907 hypothetical protein YP_003608990.1 KEGG: bxe:Bxe_B2415 quinoprotein alcohol dehydrogenase; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_003608991.1 PFAM: cytochrome C class I; KEGG: bxe:Bxe_B2414 cytochrome C YP_003608992.1 SMART: ankyrin; KEGG: bxe:Bxe_B2413 ankyrin repeat-containing protein YP_003608993.1 KEGG: bxe:Bxe_B2479 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase YP_003608994.1 KEGG: reh:PHG424 CbbY; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase YP_003608995.1 PFAM: biopolymertransporter ExbD/TolR; KEGG: bxe:Bxe_B2477 biopolymer transporter ExbD/TolR YP_003608996.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_B2476 bipolymer transporter MotA/TolQ/ExbB family YP_003608997.1 TIGRFAM: TonB family protein; KEGG: bxe:Bxe_B2475 TonB like protein YP_003608998.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bxe:Bxe_B2474 hypothetical protein YP_003608999.1 KEGG: bvi:Bcep1808_2388 hypothetical protein YP_003609000.1 KEGG: bxe:Bxe_C0169 hypothetical protein YP_003609001.1 PFAM: cytochrome C oxidase caa3-type, assembly factor CtaG-related; KEGG: bph:Bphy_4795 hypothetical protein YP_003609002.1 KEGG: bph:Bphy_4796 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome C class I YP_003609003.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: bpd:BURPS668_A1972 metal-dependent hydrolase YP_003609004.1 KEGG: bpl:BURPS1106A_A1879 phospholipase D domain-containing protein; PFAM: SNARE associated Golgi protein; phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase YP_003609005.1 KEGG: mlo:mlr4527 hypothetical protein YP_003609006.1 PFAM: transcriptional regulator; transcriptional activator domain; ATPase; KEGG: dsy:DSY3806 hypothetical protein YP_003609007.1 PFAM: polyketide cyclase/dehydrase; KEGG: bpy:Bphyt_4200 hypothetical protein YP_003609008.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: bph:Bphy_6574 protein of unknown function DUF861 cupin_3 YP_003609009.1 KEGG: similar to T cell receptor alpha YP_003609010.1 KEGG: rme:Rmet_4245 hypothetical protein YP_003609011.1 KEGG: hypothetical protein YP_003609012.1 KEGG: bpy:Bphyt_4868 TRAP dicarboxylate transporter DctP subunit; TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: extracellular solute-binding protein, family 7 YP_003609013.1 KEGG: bph:Bphy_5162 ABC transporter YP_003609014.1 KEGG: bph:Bphy_5161 gluconolactonase; PFAM: SMP-30/gluconolaconase/LRE domain protein YP_003609015.1 PFAM: inner-membrane translocator; KEGG: bph:Bphy_5160 inner-membrane translocator YP_003609016.1 PFAM: inner-membrane translocator; KEGG: bph:Bphy_5159 inner-membrane translocator YP_003609017.1 KEGG: bph:Bphy_5158 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003609018.1 KEGG: bph:Bphy_5157 simple sugar transport system substrate-binding protein YP_003609019.1 KEGG: bph:Bphy_6659 xylulokinase; TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY-like YP_003609020.1 KEGG: bph:Bphy_6660 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003609021.1 KEGG: bph:Bphy_6661 ABC transporter; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003609022.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bph:Bphy_6662 alcohol dehydrogenase YP_003609023.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_6663 binding-protein-dependent transport systems inner membrane component YP_003609024.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_6664 binding-protein-dependent transport systems inner membrane component YP_003609025.1 PFAM: extracellular solute-binding protein family 1; KEGG: bph:Bphy_6665 extracellular solute-binding protein YP_003609026.1 KEGG: bxe:Bxe_B2278 hypothetical protein YP_003609027.1 PFAM: PRC-barrel domain protein; KEGG: bpy:Bphyt_4218 PRC-barrel domain protein YP_003609028.1 KEGG: pmt:PMT0074 DNA polymerase III subunit delta YP_003609029.1 KEGG: bpy:Bphyt_6391 DNA-binding transcriptional regulator GlcC; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003609030.1 PFAM: major facilitator superfamily MFS_1; KEGG: har:HEAR1487 transporter YP_003609031.1 KEGG: bpy:Bphyt_2057 D-lactate dehydrogenase; PFAM: D-lactate dehydrogenase membrane binding ; FAD linked oxidase YP_003609032.1 PFAM: copper resistance D domain protein; KEGG: bph:Bphy_2037 copper resistance D domain-containing protein YP_003609033.1 PFAM: copper resistance protein CopC; KEGG: bph:Bphy_2038 copper resistance protein CopC YP_003609034.1 KEGG: bph:Bphy_2039 hypothetical protein YP_003609035.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: bph:Bphy_2040 multicopper oxidase type 3 YP_003609036.1 PFAM: outer membrane efflux protein; KEGG: bph:Bphy_2041 outer membrane efflux protein YP_003609037.1 KEGG: bph:Bphy_2042 hypothetical protein YP_003609038.1 manually curated; KEGG: bph:Bphy_2043 hypothetical protein YP_003609039.1 KEGG: mdi:METDI4458 hypothetical protein YP_003609040.1 SMART: pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: bpy:Bphyt_1682 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone YP_003609041.1 KEGG: bgl:bglu_2g12390 porin, gram-negative type YP_003609042.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bxe:Bxe_A3840 cytochrome oxidase subunit I YP_003609043.1 KEGG: bxe:Bxe_A3839 cytochrome bd ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_003609044.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: bac:BamMC406_5537 NADP oxidoreductase coenzyme F420-dependent YP_003609045.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bph:Bphy_6999 short-chain dehydrogenase/reductase SDR YP_003609046.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bac:BamMC406_5539 short-chain dehydrogenase/reductase SDR YP_003609047.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bac:BamMC406_5540 LysR family transcriptional regulator YP_003609048.1 PFAM: MmgE/PrpD family protein; KEGG: bav:BAV0606 catabolic enzyme YP_003609049.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bja:blr3664 oxidoreductase YP_003609050.1 PFAM: shikimate dehydrogenase substrate binding domain protein; KEGG: saq:Sare_1274 shikimate dehydrogenase substrate binding subunit YP_003609051.1 PFAM: regulatory protein LysR; KEGG: bpd:BURPS668_A2818 transcriptional regulator YP_003609052.1 PFAM: glutathione S-transferase domain; KEGG: bpy:Bphyt_5079 glutathione S-transferase domain YP_003609053.1 PFAM: regulatory protein TetR; KEGG: rlt:Rleg2_5169 TetR family transcriptional regulator YP_003609054.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rlg:Rleg_5749 short-chain dehydrogenase/reductase SDR YP_003609055.1 KEGG: bph:Bphy_4559 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003609056.1 KEGG: bph:Bphy_4560 hypothetical protein YP_003609057.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bph:Bphy_4561 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003609058.1 KEGG: bph:Bphy_4562 radical SAM domain-containing protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003609059.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bph:Bphy_4563 GCN5-related N-acetyltransferase YP_003609060.1 PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: bph:Bphy_4564 AIR synthase-like protein YP_003609061.1 PFAM: glycosyl transferase group 1; KEGG: bph:Bphy_4565 glycosyl transferase group 1 YP_003609062.1 KEGG: bph:Bphy_4566 hypothetical protein YP_003609063.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bph:Bphy_4567 FAD dependent oxidoreductase YP_003609064.1 KEGG: bph:Bphy_4568 hypothetical protein YP_003609065.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: bph:Bphy_4569 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_003609066.1 KEGG: bph:Bphy_3630 hypothetical protein YP_003609067.1 KEGG: swd:Swoo_4869 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain YP_003609068.1 KEGG: bph:Bphy_4574 hypothetical protein YP_003609069.1 KEGG: mlo:mlr1896 hypothetical protein YP_003609070.1 KEGG: sus:acid_3266 hypothetical protein YP_003609071.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:bll6974 hypothetical protein YP_003609072.1 KEGG: bph:Bphy_4497 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase YP_003609073.1 PFAM: cation transport protein ChaC; KEGG: vap:Vapar_5351 ChaC family protein YP_003609074.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A0871 LysR family transcriptional regulator YP_003609075.1 KEGG: jan:Jann_1769 mucin-associated surface protein YP_003609076.1 KEGG: bxe:Bxe_B2412 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003609077.1 PFAM: extracellular solute-binding protein family 5; KEGG: cti:RALTA_B1389 dipeptide ABC transporter substrate binding protein precursor YP_003609078.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cti:RALTA_B1388 dipeptide transporter 1 (ABC superfamily, membrane) YP_003609079.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_C0142 peptide/opine/nickel ABC transporter inner membrane protein YP_003609080.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; KEGG: app:CAP2UW1_3044 oligopeptide/dipeptide ABC transporter ATPase; SMART: ATPase AAA YP_003609081.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; KEGG: xau:Xaut_2765 oligopeptide/dipeptide ABC transporter ATPase; SMART: ATPase AAA YP_003609082.1 PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_B2411 hypothetical protein YP_003609083.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: mjl:Mjls_3947 acyl-CoA dehydrogenase type 2 YP_003609084.1 KEGG: bxe:Bxe_B2410 rhodanese-like domain-containing protein; PFAM: rhodanese; SMART: rhodanese YP_003609085.1 KEGG: bxe:Bxe_B2409 hypothetical protein YP_003609086.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_B2408 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_003609087.1 KEGG: bxe:Bxe_B2407 nitrate/sulfonate/bicarbonate ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003609088.1 KEGG: bxe:Bxe_B2406 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_003609089.1 KEGG: bxe:Bxe_C1132 hypothetical protein YP_003609090.1 KEGG: bxe:Bxe_C1130 rhodanese-like sulfur transferase; PFAM: rhodanese; SMART: rhodanese YP_003609091.1 KEGG: gtn:GTNG_2608 sulfonate ABC transporter periplasmic sulfonate-binding protein SsuA YP_003609092.1 KEGG: bph:Bphy_3116 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA YP_003609093.1 PFAM: extracellular solute-binding protein family 1; KEGG: vap:Vapar_5703 extracellular solute-binding protein family 1 YP_003609094.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: vap:Vapar_5702 binding-protein-dependent transport systems inner membrane component YP_003609095.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: vap:Vapar_5701 binding-protein-dependent transport systems inner membrane component YP_003609096.1 KEGG: ara:Arad_8127 sugar ABC transporter; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003609098.1 KEGG: ATP-dependent RNA helicase, ; K10901 bloom syndrome protein YP_003609099.1 KEGG: bac:BamMC406_6101 hypothetical protein YP_003609100.1 KEGG: bam:Bamb_6394 hypothetical protein YP_003609101.1 PFAM: chaperonin Cpn10; KEGG: bam:Bamb_6393 chaperonin Cpn10 YP_003609102.1 KEGG: bac:BamMC406_6096 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_003609103.1 PFAM: heat shock protein Hsp20; KEGG: bac:BamMC406_6093 heat shock protein HSP20 YP_003609104.1 PFAM: heat shock protein Hsp20; KEGG: bxe:Bxe_A2601 HSP20 family heat-shock protein YP_003609105.1 PFAM: heat shock protein Hsp20; KEGG: bac:BamMC406_6091 heat shock protein HSP20 YP_003609106.1 KEGG: bph:Bphy_5263 hypothetical protein YP_003609107.1 KEGG: bxe:Bxe_A2607 hypothetical protein YP_003609108.1 KEGG: bxe:Bxe_A2604 hypothetical protein YP_003609109.1 KEGG: bxe:Bxe_C0193 peptide/opine/nickel ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003609110.1 KEGG: bpy:Bphyt_6304 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003609111.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_6303 binding-protein-dependent transport systems inner membrane component YP_003609112.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_6302 binding-protein-dependent transport systems inner membrane component YP_003609113.1 PFAM: extracellular solute-binding protein family 5; KEGG: bpy:Bphyt_6301 extracellular solute-binding protein family 5 YP_003609114.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: bpy:Bphyt_6300 D-alanyl-D-alanine dipeptidase YP_003609115.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_5259 binding-protein-dependent transport systems inner membrane component YP_003609116.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_5258 binding-protein-dependent transport systems inner membrane component YP_003609117.1 KEGG: bpy:Bphyt_5257 ABC spermidine/putrescine transporter periplasmic ligand binding protein YP_003609118.1 KEGG: bxe:Bxe_B1362 ABC spermidine/putrescine transporter ATPase; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA YP_003609119.1 KEGG: bxe:Bxe_B1363 hypothetical protein; manually curated; PFAM: polysaccharide deacetylase YP_003609120.1 KEGG: bxe:Bxe_B1364 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003609121.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bpy:Bphyt_5253 flavin reductase domain protein FMN-binding YP_003609122.1 TIGRFAM: gamma-glutamyltransferase; KEGG: bpy:Bphyt_5252 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_003609123.1 KEGG: bxe:Bxe_B1430 hypothetical protein YP_003609124.1 KEGG: bcm:Bcenmc03_6340 flavin-dependent oxidoreductase-like protein YP_003609125.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: bvi:Bcep1808_5391 acyl-CoA dehydrogenase type 2 YP_003609126.1 KEGG: bcj:BCAS0440 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003609127.1 PFAM: inner-membrane translocator; KEGG: bch:Bcen2424_6575 inner-membrane translocator YP_003609128.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: bvi:Bcep1808_5390 acyl-CoA dehydrogenase type 2 YP_003609129.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bcm:Bcenmc03_6181 periplasmic binding protein/LacI transcriptional regulator YP_003609130.1 KEGG: mpo:Mpop_5139 addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156 YP_003609131.1 PFAM: plasmid stabilization system; KEGG: pla:Plav_0711 plasmid stabilization system protein YP_003609132.1 KEGG: bxe:Bxe_B1530 hypothetical protein YP_003609133.1 KEGG: bxe:Bxe_B1677 hypothetical protein YP_003609134.1 PFAM: protein of unknown function UPF0118; KEGG: lpc:LPC_1516 transporter permease YP_003609135.1 KEGG: reu:Reut_B4005 hypothetical protein YP_003609136.1 KEGG: bch:Bcen2424_6857 transposase IS66 YP_003609137.1 PFAM: cupin; KEGG: bpy:Bphyt_1446 XRE family transcriptional regulator YP_003609138.1 KEGG: mag:amb3335 ferric reductase; manually curated; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein YP_003609139.1 PFAM: purine nucleoside permease; KEGG: bpy:Bphyt_4530 purine nucleoside permease YP_003609140.1 PFAM: integrase; KEGG: bac:BamMC406_6587 integrase catalytic region YP_003609141.1 KEGG: bac:BamMC406_6101 hypothetical protein YP_003609142.1 KEGG: ATP-dependent RNA helicase, ; K10901 bloom syndrome protein YP_003609143.1 KEGG: bgl:bglu_1g18480 hypothetical protein YP_003609144.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A2079 LysR family transcriptional regulator YP_003609145.1 KEGG: dsh:Dshi_3702 fatty acid hydroxylase YP_003609146.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_2179 major facilitator superfamily MFS_1 YP_003609147.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bpy:Bphyt_2180 glucose-methanol-choline oxidoreductase YP_003609148.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_2181 enoyl-CoA hydratase/isomerase YP_003609149.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bpy:Bphyt_2182 AMP-dependent synthetase and ligase YP_003609150.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bph:Bphy_6671 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_003609151.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bpy:Bphyt_2184 molybdopterin dehydrogenase FAD-binding YP_003609152.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; carbon monoxide dehydrogenase subunit G; KEGG: bpy:Bphyt_2185 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_003609153.1 KEGG: bxe:Bxe_A2072 aromatic acid decarboxylase, flavoprotein; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_003609154.1 KEGG: bxe:Bxe_A2071 carboxylyase-like protein; TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein YP_003609155.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A2070 LysR family transcriptional regulator YP_003609156.1 PFAM: aldehyde dehydrogenase; KEGG: rpc:RPC_0853 aldehyde dehydrogenase YP_003609157.1 PFAM: protein of unknown function DUF182; KEGG: bxe:Bxe_A4357 hypothetical protein YP_003609158.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5745 LysR family transcriptional regulator YP_003609159.1 PFAM: peptidase M24; KEGG: bpy:Bphyt_5744 peptidase M24 YP_003609160.1 PFAM: general substrate transporter; KEGG: bpy:Bphyt_5743 major facilitator superfamily MFS_1 YP_003609161.1 PFAM: fumarylacetoacetate hydrolase; KEGG: bmj:BMULJ_03928 fumarylacetoacetate hydrolase family protein YP_003609162.1 PFAM: glycosyl hydrolase family 88; KEGG: ctu:Ctu_14680 unsaturated glucuronyl hydrolase YP_003609163.1 KEGG: vap:Vapar_5549 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain YP_003609164.1 PFAM: MaoC domain protein dehydratase; KEGG: azc:AZC_2420 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_003609165.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: msm:MSMEG_0489 racemase YP_003609166.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: reu:Reut_C6425 butyryl-CoA dehydrogenase YP_003609167.1 PFAM: MaoC domain protein dehydratase; KEGG: swo:Swol_1356 (de)hydratase YP_003609168.1 KEGG: bbr:BB1745 hypothetical protein; TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: extracellular solute-binding protein, family 7 YP_003609169.1 PFAM: tripartite ATP-independent periplasmic transporter DctQ component; KEGG: kra:Krad_0195 tripartite ATP-independent periplasmic transporter DctQ component YP_003609170.1 KEGG: dba:Dbac_2445 TRAP dicarboxylate transporter DctM subunit; TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit YP_003609171.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: mlo:mll1009 enoyl-CoA hydratase YP_003609172.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr3303 racemase YP_003609173.1 KEGG: rsq:Rsph17025_1547 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003609174.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: har:HEAR0660 transposase YP_003609175.1 PFAM: lytic transglycosylase catalytic; KEGG: bxe:Bxe_A0198 transglycosylase YP_003609176.1 PFAM: basic membrane lipoprotein; KEGG: rde:RD1_1647 sugar ABC transporter periplasmic sugar-binding protein YP_003609177.1 KEGG: bph:Bphy_3111 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003609178.1 KEGG: hypothetical protein YP_003609179.1 KEGG: bph:Bphy_3110 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003609180.1 KEGG: bpt:Bpet3980 autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein YP_003609181.1 PFAM: FAD dependent oxidoreductase; KEGG: bph:Bphy_7056 FAD dependent oxidoreductase YP_003609182.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bph:Bphy_7055 BFD/(2Fe-2S)-binding domain-containing protein YP_003609183.1 KEGG: bph:Bphy_7054 hypothetical protein YP_003609184.1 PFAM: FAD dependent oxidoreductase; KEGG: bph:Bphy_7053 FAD dependent oxidoreductase YP_003609185.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_7052 binding-protein-dependent transport systems inner membrane component YP_003609186.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_7051 binding-protein-dependent transport systems inner membrane component YP_003609187.1 KEGG: bph:Bphy_7050 ABC transporter; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003609188.1 PFAM: extracellular solute-binding protein family 1; KEGG: bph:Bphy_7049 extracellular solute-binding protein YP_003609189.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_7048 LysR family transcriptional regulator YP_003609190.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sen:SACE_2761 hypothetical protein YP_003609191.1 PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_4733 major facilitator superfamily sugar transporter YP_003609192.1 PFAM: FAD dependent oxidoreductase; KEGG: swi:Swit_3583 FAD dependent oxidoreductase YP_003609193.1 KEGG: hch:HCH_01946 hypothetical protein YP_003609194.1 KEGG: bxe:Bxe_C0119 hypothetical protein YP_003609195.1 KEGG: bxe:Bxe_C0126 hypothetical protein YP_003609196.1 PFAM: integrase; KEGG: bph:Bphy_7685 integrase catalytic region YP_003609197.1 KEGG: aav:Aave_1960 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003609198.1 KEGG: rme:Rmet_4706 type II and III secretion system protein YP_003609199.1 KEGG: GH12095 gene product from transcript GH12095-RA ; K04514 Rho-associated, coiled-coil containing protein kinase YP_003609200.1 PFAM: porin Gram-negative type; KEGG: bxe:Bxe_C1012 OmpC family outer membrane porin YP_003609201.1 PFAM: monooxygenase FAD-binding; KEGG: mjl:Mjls_3790 3-(3-hydroxyphenyl)propionate hydroxylase YP_003609202.1 PFAM: HpcH/HpaI aldolase; KEGG: dsh:Dshi_3145 2-dehydro-3-deoxyglucarate aldolase YP_003609203.1 KEGG: swi:Swit_4128 hypothetical protein YP_003609204.1 KEGG: rer:RER_57560 2-hydroxypenta-2,4-dienoate hydratase; manually curated; PFAM: fumarylacetoacetate hydrolase YP_003609205.1 PFAM: alpha/beta hydrolase fold; KEGG: pay:PAU_02359 hypothetical protein YP_003609206.1 KEGG: rha:RHA1_ro00518 3-(2,3-dihydroxyphenyl)propionate dioxygenase; PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B YP_003609207.1 PFAM: major facilitator superfamily MFS_1; KEGG: cgt:cgR_2956 hypothetical protein YP_003609208.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rhi:NGR_b22480 short-chain dehydrogenase/reductase YP_003609209.1 PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_C0990 3-(3-hydroxyphenyl)propionate hydroxylase YP_003609210.1 PFAM: fumarylacetoacetate hydrolase; KEGG: bxe:Bxe_C0991 fumarylacetoacetate hydrolase YP_003609211.1 KEGG: bxe:Bxe_C0993 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003609212.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_C0992 hypothetical protein YP_003609213.1 KEGG: bxe:Bxe_C0991 fumarylacetoacetate (FAA) hydrolase; PFAM: fumarylacetoacetate hydrolase YP_003609214.1 PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_C0990 3-(3-hydroxyphenyl)propionate hydroxylase YP_003609215.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_C0989 major facilitator superfamily metabolite/H(+) symporter YP_003609216.1 manually curated; KEGG: bte:BTH_II2352 hypothetical protein YP_003609217.1 KEGG: swi:Swit_2309 hypothetical protein YP_003609218.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_4048 major facilitator transporter YP_003609219.1 PFAM: pyruvate carboxyltransferase; KEGG: ajs:Ajs_2871 hydroxymethylglutaryl-CoA lyase YP_003609220.1 KEGG: nar:Saro_3653 alpha/beta hydrolase domain-containing protein; manually curated; PFAM: alpha/beta hydrolase YP_003609221.1 KEGG: pzu:PHZ_c1807 4-hydroxyacetophenone monooxygenase YP_003609222.1 KEGG: mrd:Mrad2831_4267 PAS/PAC sensor hybrid histidine kinase YP_003609223.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_C0992 hypothetical protein YP_003609224.1 KEGG: bxe:Bxe_C0993 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003609225.1 PFAM: integrase; KEGG: bph:Bphy_7685 integrase catalytic region YP_003609226.1 KEGG: GF10690 gene product from transcript GF10690-RA YP_003609227.1 KEGG: reu:Reut_B5768 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR family transcriptional regulator; SMART: regulatory protein GntR HTH YP_003609228.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: har:HEAR0660 transposase YP_003609229.1 KEGG: mch:Mchl_3898 hypothetical protein YP_003609230.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: har:HEAR0660 transposase YP_003609231.1 KEGG: bxe:Bxe_B1543 DszA family monooxygenase YP_003609232.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_B1544 hypothetical protein YP_003609233.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_B1545 hypothetical protein YP_003609234.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpy:Bphyt_4540 binding-protein-dependent transport systems inner membrane component YP_003609235.1 KEGG: bxe:Bxe_B0853 ABC methionine transporter ATPase subunit; PFAM: ABC transporter; NIL domain; SMART: ATPase AAA YP_003609236.1 PFAM: NLPA lipoprotein; KEGG: bxe:Bxe_B0852 ABC methionine transporter periplasmic ligand binding protein YP_003609237.1 KEGG: bph:Bphy_5235 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup YP_003609238.1 PFAM: class II aldolase/adducin family protein; KEGG: bph:Bphy_5234 hypothetical protein YP_003609239.1 PFAM: cysteine dioxygenase type I; KEGG: bph:Bphy_5233 cysteine dioxygenase type I YP_003609240.1 KEGG: bph:Bphy_5232 rhodanese domain-containing protein; PFAM: rhodanese; SMART: rhodanese YP_003609241.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1550 LysR family transcriptional regulator YP_003609242.1 TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: bph:Bphy_5229 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_003609243.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pfl:PFL_1379 acyl-CoA dehydrogenase family protein YP_003609244.1 KEGG: bbt:BBta_1980 FMNH2-dependent aliphatic sulphonate monooxygenase; PFAM: Luciferase-like, subgroup YP_003609245.1 PFAM: NMT1/THI5 like domain protein; KEGG: bxe:Bxe_C0117 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_003609246.1 KEGG: bxe:Bxe_C0116 nitrate/sulfonate/bicarbonate ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003609247.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_C0115 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_003609248.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; KEGG: bph:Bphy_5227 substrate-binding region of ABC-type glycine betaine transporter YP_003609249.1 PFAM: nitroreductase; KEGG: bxe:Bxe_C0111 nitroreductase YP_003609250.1 PFAM: OsmC family protein; KEGG: bcm:Bcenmc03_6182 OsmC family protein YP_003609251.1 KEGG: mxa:MXAN_5494 hypothetical protein YP_003609252.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: aav:Aave_0877 acyl-CoA dehydrogenase type 2 YP_003609253.1 PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_C0148 luciferase-like monooxygenase YP_003609254.1 KEGG: bxe:Bxe_C0147 desulfurizing enzyme YP_003609255.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_C0146 peptide/opine/nickel ABC transporter periplasmic ligand-binding protein YP_003609256.1 PFAM: aldo/keto reductase; KEGG: avi:Avi_7188 aldo/keto reductase YP_003609257.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_4877 ABC transporter substrate binding protein YP_003609258.1 KEGG: bxe:Bxe_B1562 ABC peptide transporter duplicated ATPases; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003609259.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_B1563 ABC peptide transporter inner membrane subunit YP_003609260.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_B1564 ABC peptide transporter inner membrane subunit YP_003609261.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_B1565 ABC peptide transporter periplasmic ligand binding protein YP_003609262.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_1059 hypothetical protein YP_003609263.1 KEGG: bxe:Bxe_C0098 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003609264.1 KEGG: bxe:Bxe_C0097 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003609265.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C0096 branched chain amino acid ABC transporter inner membrane protein YP_003609266.1 PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_C0095 branched chain amino acid ABC transporter periplasmic ligand-binding protein YP_003609267.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_C0094 LysR family transcriptional regulator YP_003609268.1 PFAM: monooxygenase FAD-binding; KEGG: bxe:Bxe_C0093 oxidoreductase YP_003609269.1 KEGG: bxe:Bxe_C0092 hypothetical protein YP_003609270.1 KEGG: bxe:Bxe_C0091 alkylhydroperoxidase-related; TIGRFAM: hypothetical protein; alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase YP_003609271.1 PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_C0090 branched chain amino acid ABC transporter periplasmic ligand-binding protein YP_003609272.1 KEGG: bxe:Bxe_A2176 nitrilotriacetate monooxygenase component A YP_003609273.1 PFAM: chaperonin Cpn10; KEGG: bpd:BURPS668_A0737 co-chaperonin GroES YP_003609274.1 KEGG: bpm:BURPS1710b_A2030 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_003609275.1 PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_A2175 nitrilotriacetate monooxygenase component A YP_003609276.1 PFAM: Luciferase-like, subgroup; KEGG: bxe:Bxe_B1550 nitrilotriacetate monooxygenase subunit A YP_003609277.1 KEGG: bxe:Bxe_C0138 hypothetical protein YP_003609278.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B1567 acyl-CoA dehydrogenase YP_003609279.1 PFAM: extracellular solute-binding protein family 5; KEGG: bxe:Bxe_C0161 peptide/opine/nickel ABC transporter periplasmic ligand-binding protein YP_003609280.1 PFAM: LysR substrate-binding; KEGG: bpt:Bpet1279 LysR family transcriptional regulator YP_003609281.1 KEGG: cti:RALTA_B1161 lipoprotein YP_003609282.1 KEGG: mxa:MXAN_2847 hypothetical protein YP_003609283.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bvi:Bcep1808_6795 phage integrase family protein YP_003609284.1 KEGG: mlo:mlr1693 ATP-binding protein of sugar ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA YP_003609285.1 PFAM: inner-membrane translocator; KEGG: ret:RHE_CH03189 sugar ABC transporter permease YP_003609286.1 KEGG: mlo:mll1692 periplasmic sugar-binding protein of sugar ABC transporter YP_003609287.1 KEGG: bxe:Bxe_B0470 hypothetical protein YP_003609288.1 KEGG: sus:acid_6278 hypothetical protein YP_003609289.1 PFAM: alpha/beta hydrolase fold; KEGG: bph:Bphy_5645 alpha/beta hydrolase YP_003609290.1 PFAM: methyltransferase type 11; KEGG: bph:Bphy_5646 methyltransferase type 11 YP_003609291.1 KEGG: bph:Bphy_5270 hypothetical protein YP_003609292.1 KEGG: bgl:bglu_2g14660 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))/phosphate acetyltransferase; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase YP_003609293.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bgl:bglu_2g14670 transcriptional regulator, LysR family protein YP_003609294.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bam:Bamb_5304 LysR family transcriptional regulator YP_003609295.1 PFAM: alanine racemase domain protein; KEGG: bac:BamMC406_3484 alanine racemase domain-containing protein YP_003609296.1 KEGG: bps:BPSS2059 hypothetical protein; manually curated; PFAM: endoribonuclease L-PSP YP_003609297.1 PFAM: sodium:dicarboxylate symporter; KEGG: bph:Bphy_5637 sodium:dicarboxylate symporter YP_003609298.1 PFAM: aminotransferase class V; KEGG: sus:acid_5969 pyridoxal-dependent decarboxylase YP_003609299.1 KEGG: cak:Caul_0531 TetR family transcriptional regulator; manually curated; PFAM: regulatory protein TetR YP_003609300.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cak:Caul_0532 hypothetical protein YP_003609301.1 KEGG: swi:Swit_1907 hypothetical protein YP_003609302.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMa1757 short chain YP_003609303.1 KEGG: smd:Smed_1278 hypothetical protein YP_003609304.1 KEGG: bac:BamMC406_5615 hypothetical protein YP_003609305.1 PFAM: protein of unknown function DUF156; KEGG: bac:BamMC406_6017 regulator protein FrmR YP_003609306.1 KEGG: bpy:Bphyt_5114 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein YP_003609308.1 KEGG: hypothetical protein YP_003609309.1 KEGG: bcm:Bcenmc03_2365 hypothetical protein YP_003609310.1 KEGG: bvi:Bcep1808_2147 hypothetical protein YP_003609311.1 KEGG: reu:Reut_B5817 adenylyl cyclase class-3/4/guanylyl cyclase; PFAM: transcriptional activator domain; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase YP_003609312.1 KEGG: reu:Reut_B5819 hypothetical protein YP_003609313.1 PFAM: thiamineS protein; KEGG: rso:RS04773 hypothetical protein YP_003609314.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gau:GAU_3706 hypothetical membrane protein YP_003609315.1 KEGG: smt:Smal_1052 transcriptional regulator, MarR family with acetyltransferase activity; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR YP_003609316.1 KEGG: bph:Bphy_5898 transport-associated; PFAM: transport-associated; SMART: transport-associated and nodulation region YP_003609317.1 PFAM: High potential iron-sulfur protein; KEGG: bmj:BMULJ_00190 iron-sulfur protein YP_003609318.1 KEGG: bcj:pBCA077 hypothetical protein YP_003609319.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: bac:BamMC406_6431 tryptophanyl-tRNA synthetase II; PFAM: aminoacyl-tRNA synthetase class Ib YP_003609320.1 KEGG: sma:SAV_359 NDP-hexose 4-ketoreductase YP_003609321.1 KEGG: mrd:Mrad2831_5997 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003609322.1 KEGG: bmu:Bmul_4804 hemerythrin-like metal-binding protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: hemerythrin HHE cation binding domain protein YP_003609323.1 KEGG: bph:Bphy_7697 hypothetical protein YP_003609324.1 KEGG: rso:RSc1799 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_003609325.1 PFAM: transketolase; transketolase domain protein; KEGG: bph:Bphy_6076 transketolase YP_003609326.1 TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; KEGG: bph:Bphy_6075 pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component YP_003609327.1 KEGG: bpy:Bphyt_4108 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003609328.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4107 major facilitator superfamily MFS_1 YP_003609329.1 KEGG: bpy:Bphyt_4106 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_003609330.1 PFAM: NIPSNAP family containing protein; KEGG: lch:Lcho_1202 NIPSNAP family protein YP_003609331.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: pna:Pnap_2710 succinate dehydrogenase YP_003609332.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lch:Lcho_1200 short-chain dehydrogenase/reductase SDR YP_003609333.1 KEGG: bph:Bphy_6092 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_003609334.1 PFAM: oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; GntR domain protein; cytochrome P450; KEGG: bph:Bphy_6093 oxidoreductase FAD-binding subunit YP_003609335.1 KEGG: bpy:Bphyt_6278 hypothetical protein YP_003609336.1 PFAM: protein of unknown function DUF2254, membrane; KEGG: sfu:Sfum_2428 membrane protein-like YP_003609337.1 KEGG: rme:Rmet_5185 carbonic anhydrase; PFAM: carbonic anhydrase YP_003609338.1 PFAM: extracellular ligand-binding receptor; KEGG: bpy:Bphyt_0915 extracellular ligand-binding receptor YP_003609339.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_0914 inner-membrane translocator YP_003609340.1 KEGG: bxe:Bxe_A3708 branched chain amino acid ABC transporter ATPase/inner membrane protein; PFAM: ABC transporter; inner-membrane translocator; SMART: ATPase AAA YP_003609341.1 KEGG: bxe:Bxe_A3709 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003609342.1 KEGG: bph:Bphy_5856 BNR/Asp-box repeat-containing protein YP_003609343.1 PFAM: protein of unknown function DUF62; KEGG: app:CAP2UW1_3654 protein of unknown function DUF62 YP_003609344.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rlg:Rleg_4851 LysR family transcriptional regulator YP_003609345.1 PFAM: aldo/keto reductase; KEGG: bja:blr2609 oxidoreductase YP_003609346.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4077 major facilitator superfamily MFS_1 YP_003609347.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B0530 LysR family transcriptional regulator YP_003609348.1 PFAM: transcriptional activator domain; alpha/beta hydrolase fold; KEGG: bpy:Bphyt_5093 SARP family transcriptional regulator YP_003609349.1 PFAM: monooxygenase FAD-binding; KEGG: bpy:Bphyt_5094 hypothetical protein YP_003609350.1 KEGG: rle:pRL80020 hypothetical protein YP_003609351.1 KEGG: gvi:glr3742 LuxR family transcriptional regulatory protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_003609352.1 KEGG: gvi:glr3741 serine protease; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003609353.1 KEGG: hypothetical protein LOC100033344 YP_003609354.1 PFAM: amino acid-binding ACT domain protein; KEGG: pol:Bpro_3359 amino acid-binding ACT YP_003609355.1 KEGG: dac:Daci_2139 histidine kinase YP_003609356.1 PFAM: integrase; KEGG: bte:BTH_I1930 transposase YP_003609357.1 PFAM: transposase IS3/IS911 family protein; KEGG: bvi:Bcep1808_7044 transposase IS3/IS911 family protein YP_003609358.1 PFAM: glutathione S-transferase domain; KEGG: mlo:mlr0981 glutathione S-transferase YP_003609359.1 KEGG: bph:Bphy_5342 hypothetical protein YP_003609360.1 KEGG: bpy:Bphyt_6076 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003609361.1 KEGG: bph:Bphy_1497 hypothetical protein YP_003609362.1 PFAM: protein of unknown function DUF1568; KEGG: bpy:Bphyt_0859 protein of unknown function DUF1568 YP_003609363.1 KEGG: bph:Bphy_6449 lipoprotein YP_003609364.1 KEGG: tau:Tola_0686 hypothetical protein YP_003609365.1 KEGG: bxe:Bxe_A2064 hypothetical protein YP_003609366.1 KEGG: bpm:BURPS1710b_A1425 hypothetical protein YP_003609367.1 KEGG: dac:Daci_4742 phasin family protein YP_003609368.1 KEGG: bpy:Bphyt_6233 hypothetical protein YP_003609369.1 KEGG: bph:Bphy_6558 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003609370.1 KEGG: bph:Bphy_7698 hypothetical protein YP_003609371.1 KEGG: bpy:Bphyt_6358 hypothetical protein YP_003609372.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bph:Bphy_4749 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein; response regulator receiver YP_003609373.1 KEGG: bxe:Bxe_C1264 MutT/NUDIX family protein; manually curated; PFAM: NUDIX hydrolase YP_003609374.1 PFAM: conserved hypothetical protein; KEGG: rop:ROP_36300 hypothetical membrane protein YP_003609375.1 KEGG: bcm:Bcenmc03_5812 GntR domain-containing protein; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003609376.1 KEGG: ret:RHE_CH01787 ribose ABC transporter substrate-binding protein YP_003609377.1 KEGG: mlo:mll1680 ATP-binding protein of ribose ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA YP_003609378.1 PFAM: inner-membrane translocator; KEGG: mlo:mll1679 permease of ribose ABC transporter YP_003609379.1 PFAM: inner-membrane translocator; KEGG: mlo:mll1678 permease of ribose ABC transporter YP_003609380.1 KEGG: bpy:Bphyt_1503 hypothetical protein YP_003609381.1 KEGG: bph:Bphy_5256 natural resistance-associated macrophage protein YP_003609382.1 KEGG: bxe:Bxe_A3463 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein YP_003609383.1 PFAM: protein of unknown function DUF1028; KEGG: bph:Bphy_6044 hypothetical protein YP_003609384.1 PFAM: endoribonuclease L-PSP; KEGG: bvi:Bcep1808_5677 endoribonuclease L-PSP YP_003609385.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bxe:Bxe_A3466 hypothetical protein YP_003609386.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_6041 LysR family transcriptional regulator YP_003609387.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bpy:Bphyt_2370 Rieske (2Fe-2S) domain protein YP_003609388.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; KEGG: bph:Bphy_6039 spermidine/putrescine ABC transporter ATPase subunit; SMART: ATPase AAA YP_003609389.1 PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_A3470 ABC spermidine/putrescine transporter periplasmic ligand binding protein YP_003609390.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A3471 ABC spermidine/putrescine transporter inner membrane subunit YP_003609391.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bxe:Bxe_A3472 ABC spermidine/putrescine transporter inner membrane subunit YP_003609392.1 KEGG: bph:Bphy_7591 nuclear protein SET; PFAM: nuclear protein SET; SMART: nuclear protein SET YP_003609393.1 KEGG: shm:Shewmr7_1128 antibiotic biosynthesis monooxygenase YP_003609394.1 PFAM: fatty acid hydroxylase; KEGG: bph:Bphy_6645 fatty acid hydroxylase YP_003609395.1 KEGG: bph:Bphy_2413 transporter DMT superfamily protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane YP_003609396.1 KEGG: bph:Bphy_7373 hypothetical protein YP_003609397.1 KEGG: bpy:Bphyt_2643 hypothetical protein YP_003609398.1 KEGG: bpy:Bphyt_7154 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase YP_003609399.1 KEGG: reu:Reut_C6077 hypothetical protein YP_003609400.1 KEGG: bph:Bphy_6174 hypothetical protein YP_003609401.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B2694 3-oxoacyl-(acyl-carrier-protein) reductase YP_003609402.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bam:Bamb_3395 Asp/Glu racemase YP_003609403.1 PFAM: extracellular ligand-binding receptor; KEGG: dal:Dalk_3948 extracellular ligand-binding receptor YP_003609404.1 PFAM: inner-membrane translocator; KEGG: dde:Dde_0259 branched-chain amino acid ABC transporter permease YP_003609405.1 KEGG: har:HEAR2680 high-affinity branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter; inner-membrane translocator; SMART: ATPase AAA YP_003609406.1 KEGG: sth:STH1618 branched chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase YP_003609407.1 PFAM: Domain of unknown function DUF1989; KEGG: bac:BamMC406_4449 hypothetical protein YP_003609408.1 KEGG: ara:Arad_7296 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase YP_003609409.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bpd:BURPS668_A1535 YbaK YP_003609410.1 KEGG: bch:Bcen2424_5761 hypothetical protein YP_003609411.1 PFAM: hypothetical protein; TPR repeat-containing protein; KEGG: pgn:PGN_1227 TPR domain protein YP_003609412.1 manually curated; KEGG: bph:Bphy_6542 beta-galactosidase; PFAM: glycoside hydrolase family 35 YP_003609413.1 KEGG: bph:Bphy_6541 enterotoxin YP_003609414.1 KEGG: bpt:Bpet3144 hypothetical protein YP_003609415.1 KEGG: sus:acid_6846 hypothetical protein YP_003609416.1 KEGG: bam:Bamb_5451 hypothetical protein YP_003609417.1 KEGG: dac:Daci_0560 glycosyltransferase YP_003609418.1 KEGG: cyt:cce_1553 hypothetical protein YP_003609419.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rfr:Rfer_0435 NAD-dependent epimerase/dehydratase YP_003609420.1 KEGG: bph:Bphy_1031 hypothetical protein YP_003609421.1 KEGG: bpt:Bpet3049 sulfite reductase subunit beta; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_003609422.1 KEGG: bpt:Bpet3048 sulfite reductase (NADPH) flavoprotein alpha-component; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: flavodoxin/nitric oxide synthase; FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein YP_003609423.1 KEGG: bph:Bphy_6053 hypothetical protein YP_003609424.1 KEGG: reu:Reut_A1756 CBS; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_003609425.1 PFAM: coenzyme A transferase; KEGG: reu:Reut_A1494 propionate CoA-transferase YP_003609426.1 KEGG: bmj:BMULJ_02243 lipoprotein YP_003609427.1 KEGG: bpy:Bphyt_3982 hypothetical protein YP_003609428.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bgl:bglu_1g18250 YeeE/YedE YP_003609429.1 KEGG: bpy:Bphyt_7052 conserved hypothetical secreted protein YP_003609430.1 KEGG: bph:Bphy_4599 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003609431.1 PFAM: ATP adenylyltransferase-like; KEGG: bph:Bphy_6436 Ap4A phosphorylase II YP_003609432.1 PFAM: protein of unknown function DUF355; KEGG: bph:Bphy_6435 hypothetical protein YP_003609433.1 PFAM: tryptophan leader peptide; KEGG: hypothetical protein YP_003609434.1 KEGG: bph:Bphy_5676 hypothetical protein YP_003609435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_3914 GCN5-related N-acetyltransferase YP_003609436.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: bpy:Bphyt_6942 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003609437.1 KEGG: mno:Mnod_0067 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003609438.1 PFAM: inner-membrane translocator; KEGG: mrd:Mrad2831_1817 inner-membrane translocator YP_003609439.1 PFAM: inner-membrane translocator; KEGG: mrd:Mrad2831_1816 inner-membrane translocator YP_003609440.1 PFAM: extracellular ligand-binding receptor; KEGG: met:M446_4762 extracellular ligand-binding receptor YP_003609441.1 PFAM: extracellular solute-binding protein family 1; KEGG: bam:Bamb_4158 extracellular solute-binding protein YP_003609442.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bac:BamMC406_4681 binding-protein-dependent transporters inner membrane component YP_003609443.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bam:Bamb_4156 binding-protein-dependent transport systems inner membrane component YP_003609444.1 PFAM: phosphatidylinositol-specific phospholipase C X region; KEGG: bcn:Bcen_3596 phosphatidylinositol-specific phospholipase C, X region; SMART: phosphatidylinositol-specific phospholipase C X region YP_003609445.1 KEGG: hypothetical protein YP_003609447.1 KEGG: bac:BamMC406_2690 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003609448.1 KEGG: bac:BamMC406_2689 hypothetical protein YP_003609449.1 KEGG: bxe:Bxe_B2334 hypothetical protein YP_003609450.1 KEGG: bph:Bphy_5330 hypothetical protein YP_003609451.1 KEGG: bpl:BURPS1106A_A2992 hypothetical protein YP_003609452.1 KEGG: vap:Vapar_4189 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003609453.1 PFAM: extracellular ligand-binding receptor; KEGG: pol:Bpro_3384 extracellular ligand-binding receptor YP_003609454.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_3383 inner-membrane translocator YP_003609455.1 KEGG: pol:Bpro_3382 inner-membrane translocator; manually curated; PFAM: inner-membrane translocator YP_003609456.1 KEGG: bja:bll5950 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_003609457.1 KEGG: rpb:RPB_1583 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003609458.1 PFAM: alpha/beta hydrolase fold; KEGG: reu:Reut_A1609 alpha/beta hydrolase fold YP_003609459.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_A1608 LysR family transcriptional regulator YP_003609460.1 KEGG: bxe:Bxe_B2649 hypothetical protein YP_003609461.1 PFAM: regulatory protein TetR; KEGG: bpy:Bphyt_1885 TetR family transcriptional regulator YP_003609462.1 KEGG: bph:Bphy_3671 hypothetical protein YP_003609463.1 KEGG: bph:Bphy_3672 hypothetical protein YP_003609464.1 PFAM: lytic transglycosylase catalytic; KEGG: rpi:Rpic_3138 lytic transglycosylase catalytic YP_003609465.1 KEGG: bpy:Bphyt_6290 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein YP_003609466.1 PFAM: YCII-related; KEGG: bph:Bphy_6406 DGPFAETKE family protein YP_003609467.1 KEGG: bph:Bphy_5855 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B; aconitate hydratase domain protein YP_003609468.1 PFAM: protein of unknown function DUF1326; KEGG: bte:BTH_I2823 hypothetical protein YP_003609469.1 PFAM: protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: bpr:GBP346_A1450 metal-binding integral membrane protein YP_003609470.1 PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_2211 hydrolase YP_003609471.1 PFAM: regulatory protein TetR; KEGG: vei:Veis_1032 TetR family transcriptional regulator YP_003609472.1 PFAM: protein of unknown function DUF1493; KEGG: bxe:Bxe_A0152 hypothetical protein YP_003609473.1 manually curated; KEGG: bxe:Bxe_B0666 hypothetical protein YP_003609474.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: bam:Bamb_4466 CHAD domain-containing protein YP_003609475.1 KEGG: bpy:Bphyt_4697 hypothetical protein YP_003609476.1 KEGG: bmj:BMULJ_04293 hypothetical protein YP_003609477.1 KEGG: bxe:Bxe_A0918 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter YP_003609478.1 KEGG: bph:Bphy_5862 filamentous haemagglutinin outer membrane protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein YP_003609479.1 PFAM: major facilitator superfamily MFS_1; KEGG: hypothetical protein YP_003609480.1 KEGG: aba:acid345_4080 hypothetical protein YP_003609481.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_C1336 major facilitator superfamily multidrug efflux transporter YP_003609482.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcm:Bcenmc03_6395 LysR family transcriptional regulator YP_003609483.1 KEGG: bpr:GBP346_A2026 hypothetical protein YP_003609484.1 KEGG: bph:Bphy_3120 phosphate ABC transporter periplasmic phosphate-binding protein; TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_003609485.1 KEGG: gvi:gll1999 pyruvate kinase YP_003609486.1 TIGRFAM: methyltransferase FkbM family; KEGG: chl:Chy400_3909 methyltransferase FkbM family YP_003609487.1 manually curated; KEGG: bpy:Bphyt_2361 hypothetical protein YP_003609488.1 KEGG: rso:RS04708 hypothetical protein YP_003609489.1 PFAM: protein of unknown function DUF2134, membrane; KEGG: bph:Bphy_5859 transmembrane protein YP_003609490.1 PFAM: TadE family protein; KEGG: bph:Bphy_5858 TadE family protein YP_003609491.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_C0162 flavin reductase-like protein YP_003609492.1 KEGG: bph:Bphy_1520 hypothetical protein YP_003609493.1 PFAM: PRC-barrel domain protein; KEGG: bpy:Bphyt_4218 PRC-barrel domain protein YP_003609494.1 KEGG: zgc:153663 YP_003609495.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bmj:BMULJ_03527 LysR family transcriptional regulator YP_003609496.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_4414 short-chain dehydrogenase/reductase SDR YP_003609497.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_4413 major facilitator transporter YP_003609498.1 PFAM: transketolase; KEGG: bac:BamMC406_4931 transketolase domain-containing protein YP_003609499.1 PFAM: transketolase; transketolase domain protein; KEGG: bch:Bcen2424_6657 transketolase, central region YP_003609500.1 KEGG: bph:Bphy_1107 hypothetical protein YP_003609501.1 KEGG: bph:Bphy_1114 polyhydroxyalkanoate depolymerase, intracellular; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_003609502.1 KEGG: bph:Bphy_1142 hypothetical protein YP_003609503.1 KEGG: bpy:Bphyt_4380 prevent-host-death family protein; TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172 YP_003609504.1 PFAM: twitching mobility protein PilT; KEGG: bpy:Bphyt_4379 twitching mobility protein PilT YP_003609505.1 KEGG: bph:Bphy_1131 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_003609506.1 KEGG: bte:BTH_II1674 polyketide synthase YP_003609507.1 PFAM: UspA domain protein; KEGG: bph:Bphy_5815 UspA domain-containing protein YP_003609508.1 PFAM: UspA domain protein; KEGG: bph:Bphy_1134 UspA domain-containing protein YP_003609509.1 PFAM: UspA domain protein; KEGG: hypothetical protein YP_003609510.1 PFAM: response regulator receiver; KEGG: bph:Bphy_5812 response regulator receiver protein YP_003609511.1 KEGG: bph:Bphy_5811 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_003609512.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold domain protein; KEGG: bph:Bphy_5809 PAS/PAC sensor signal transduction histidine kinase; SMART: PAS domain containing protein; ATP-binding region ATPase domain protein YP_003609513.1 PFAM: UspA domain protein; KEGG: bph:Bphy_1117 UspA domain-containing protein YP_003609514.1 KEGG: bpy:Bphyt_6316 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein YP_003609515.1 KEGG: bxe:Bxe_A1842 cytochrome C552 YP_003609516.1 KEGG: bxe:Bxe_A1841 hypothetical protein YP_003609517.1 KEGG: bac:BamMC406_6493 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003609518.1 KEGG: bmj:BMULJ_05057 OmpR family two-component system response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver YP_003609519.1 KEGG: pfo:Pfl01_2250 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_003609520.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; serine/threonine-protein kinase-like domain; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: bpt:Bpet3930 serine/threonine kinase protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; serine/threonine protein kinase; PAS domain containing protein; histidine kinase A domain protein YP_003609521.1 KEGG: bph:Bphy_6256 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_003609522.1 PFAM: blue (type 1) copper domain protein; KEGG: bph:Bphy_6257 blue (type1) copper domain-containing protein YP_003609523.1 KEGG: bph:Bphy_6258 hypothetical protein YP_003609524.1 PFAM: FAD linked oxidase; KEGG: vei:Veis_2082 FAD linked oxidase domain-containing protein YP_003609525.1 KEGG: bph:Bphy_5156 L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase YP_003609526.1 KEGG: bph:Bphy_5155 altronate dehydratase; PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein YP_003609527.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_5154 major facilitator transporter YP_003609528.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: scl:sce1243 tagaturonate reductase YP_003609529.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bpy:Bphyt_5476 alcohol dehydrogenase GroES domain protein YP_003609530.1 KEGG: bph:Bphy_5153 GntR domain-containing protein; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003609531.1 PFAM: peptidase T2 asparaginase 2; KEGG: spe:Spro_2851 asparaginase YP_003609532.1 PFAM: extracellular solute-binding protein family 1; KEGG: bra:BRADO1542 ABC transporter substrate-binding protein YP_003609533.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpf:Rpic12D_5108 LysR family transcriptional regulator YP_003609534.1 PFAM: amidohydrolase; KEGG: bja:bll5494 hypothetical protein YP_003609535.1 PFAM: peptidase M24; creatinase; KEGG: reh:H16_B0923 aminopeptidase P ( Xaa-Pro aminopeptidase) YP_003609536.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: xau:Xaut_0858 binding-protein-dependent transport systems inner membrane component YP_003609537.1 PFAM: extracellular solute-binding protein family 1; KEGG: met:M446_4681 extracellular solute-binding protein YP_003609538.1 KEGG: met:M446_4680 ABC transporter; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003609539.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: met:M446_4679 binding-protein-dependent transport systems inner membrane component YP_003609540.1 PFAM: major facilitator superfamily MFS_1; KEGG: rlg:Rleg_0960 major facilitator superfamily MFS_1 YP_003609541.1 KEGG: bph:Bphy_7106 alpha,alpha-trehalase; PFAM: glycoside hydrolase family 37 YP_003609542.1 PFAM: phosphoesterase; KEGG: bac:BamMC406_3544 phosphoesterase YP_003609543.1 PFAM: K potassium transporter; KEGG: bpy:Bphyt_6716 K potassium transporter YP_003609544.1 PFAM: regulatory protein TetR; KEGG: bac:BamMC406_4165 TetR family transcriptional regulator YP_003609545.1 KEGG: bph:Bphy_4329 secretion protein HlyD family protein YP_003609546.1 KEGG: bph:Bphy_4328 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003609547.1 PFAM: ABC transporter; KEGG: bpt:Bpet2593 ABC-type multidrug transporter, permease YP_003609548.1 KEGG: bam:Bamb_3688 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003609549.1 KEGG: bcj:BCAM0170 benzoate membrane transport protein; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein YP_003609550.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B0912 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase YP_003609551.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: rme:Rmet_4884 oxidoreductase FAD-binding region YP_003609552.1 TIGRFAM: benzoate 1,2-dioxygenase, small subunit; KEGG: bxe:Bxe_B0914 benzoate 1,2-dioxygenase subunit beta BenB; PFAM: aromatic-ring-hydroxylating dioxygenase subunit beta YP_003609553.1 KEGG: bxe:Bxe_B0915 benzoate 1,2-dioxygenase subunit alpha BenA; TIGRFAM: benzoate 1,2-dioxygenase, large subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like YP_003609555.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_5353 LysR family transcriptional regulator YP_003609556.1 KEGG: bpy:Bphyt_5953 cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003609557.1 KEGG: bcj:BCAM0760 histidine transporter permease; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003609558.1 KEGG: bac:BamMC406_3608 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component YP_003609559.1 KEGG: bvi:Bcep1808_6667 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003609560.1 KEGG: rpe:RPE_4470 hypothetical protein YP_003609561.1 KEGG: avi:Avi_3476 hypothetical protein YP_003609562.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bac:BamMC406_3380 Rieske (2Fe-2S) domain-containing protein YP_003609563.1 KEGG: bph:Bphy_5625 YCII-related YP_003609564.1 KEGG: bxe:Bxe_A1963 hypothetical protein YP_003609565.1 KEGG: bxe:Bxe_B2597 hypothetical protein YP_003609566.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bac:BamMC406_3380 Rieske (2Fe-2S) domain-containing protein YP_003609567.1 PFAM: YCII-related; KEGG: bph:Bphy_5625 YCII-related YP_003609568.1 PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bph:Bphy_5624 intradiol ring-cleavage dioxygenase YP_003609569.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bph:Bphy_5623 iron-containing alcohol dehydrogenase YP_003609570.1 PFAM: aldehyde dehydrogenase; KEGG: bam:Bamb_5214 betaine-aldehyde dehydrogenase YP_003609571.1 KEGG: bph:Bphy_5621 hypothetical protein YP_003609572.1 KEGG: bcm:Bcenmc03_4088 hypothetical protein YP_003609573.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_5619 LysR family transcriptional regulator YP_003609574.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_5618 major facilitator transporter YP_003609575.1 KEGG: vap:Vapar_3642 hypothetical protein YP_003609576.1 TIGRFAM: amidohydrolase; KEGG: rpi:Rpic_3113 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003609577.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpf:Rpic12D_2384 major facilitator superfamily MFS_1 YP_003609578.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reh:H16_A2778 LysR family transcriptional regulator YP_003609579.1 KEGG: yen:YE2833 hypothetical protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_003609580.1 KEGG: bpy:Bphyt_1586 hypothetical protein YP_003609581.1 PFAM: methyltransferase type 11; KEGG: bph:Bphy_2889 methyltransferase type 11 YP_003609582.1 PFAM: acylphosphatase; KEGG: reu:Reut_C6189 acylphosphatase YP_003609583.1 KEGG: bxe:Bxe_A2419 hypothetical protein YP_003609584.1 KEGG: hypothetical protein YP_003609585.1 KEGG: bpy:Bphyt_1598 hypothetical protein YP_003609586.1 PFAM: aldehyde dehydrogenase; KEGG: bmj:BMULJ_03357 NAD-dependent aldehyde dehydrogenase YP_003609589.1 KEGG: bph:Bphy_5888 CBS domain-containing protein; PFAM: CBS domain containing protein; transport-associated; SMART: CBS domain containing protein YP_003609590.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: bpy:Bphyt_7185 activator of HSP90 ATPase 1 family protein YP_003609591.1 KEGG: bmj:BMULJ_03971 2-haloacid dehalogenase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: haloacid dehalogenase YP_003609592.1 PFAM: NUDIX hydrolase; KEGG: bmj:BMULJ_04843 ADP-ribose pyrophosphatase YP_003609593.1 KEGG: bch:Bcen2424_0941 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003609594.1 KEGG: bxe:Bxe_C1295 polar amino acid ABC transporter periplasmic ligand-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_003609595.1 KEGG: bph:Bphy_5280 alpha,alpha-trehalase; PFAM: glycoside hydrolase family 37 YP_003609596.1 KEGG: rso:RS03755 hypothetical protein YP_003609597.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bac:BamMC406_3358 peptidase S10 serine carboxypeptidase YP_003609598.1 KEGG: bmu:Bmul_5191 hypothetical protein YP_003609599.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpi:Rpic_0075 glyoxalase/bleomycin resistance protein/dioxygenase YP_003609600.1 KEGG: bxe:Bxe_A1506 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003609601.1 PFAM: protein of unknown function UPF0118; KEGG: lpc:LPC_1516 transporter permease YP_003609602.1 KEGG: bph:Bphy_3722 hypothetical protein YP_003609603.1 KEGG: pna:Pnap_0308 hypothetical protein YP_003609604.1 KEGG: reh:H16_B1107 phospholipase D; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase YP_003609605.1 KEGG: bxe:Bxe_A3222 lipoprotein YP_003609606.1 KEGG: rme:Rmet_5667 hypothetical protein YP_003609607.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA; ATPase AAA; Clp domain protein; Clp ATPase-like; KEGG: bpd:BURPS668_A0178 chaperone ClpB; SMART: AAA ATPase YP_003609608.1 KEGG: bgl:bglu_2g01600 hypothetical protein YP_003609609.1 PFAM: virulence protein SciE type; KEGG: bac:BamMC406_3010 virulence protein SciE type YP_003609610.1 KEGG: bac:BamMC406_6690 type VI secretion system lysozyme-related protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein YP_003609611.1 KEGG: bgl:bglu_2g01570 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_003609612.1 KEGG: bgl:bglu_2g01560 cytoplasmic protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_003609613.1 KEGG: bgl:bglu_2g01550 hypothetical protein; TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein YP_003609614.1 PFAM: fimbrial protein; KEGG: bgl:bglu_2g01540 fimbrial protein YP_003609615.1 KEGG: bgl:bglu_2g01530 hypothetical protein YP_003609616.1 KEGG: bgl:bglu_2g01520 rhs family protein; TIGRFAM: YD repeat protein; PFAM: RHS protein; hypothetical protein YP_003609617.1 PFAM: PAAR repeat-containing protein; KEGG: bte:BTH_II0130 rhs family protein YP_003609618.1 KEGG: bgl:bglu_2g01500 rhs element Vgr protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; Gp5 domain protein YP_003609619.1 KEGG: bgl:bglu_2g01480 lipoprotein, TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215 YP_003609620.1 KEGG: bgl:bglu_2g01470 OmpA/MotB; TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: type IV / VI secretion system, DotU; OmpA/MotB domain protein YP_003609621.1 KEGG: bgl:bglu_2g01460 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_003609622.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: bgl:bglu_2g01450 hypothetical protein YP_003609623.1 KEGG: bgl:bglu_2g01440 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_003609624.1 KEGG: bgl:bglu_2g01430 hypothetical protein superfamily protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_003609625.1 PFAM: OmpA/MotB domain protein; KEGG: bgl:bglu_2g01410 outer membrane protein YP_003609626.1 manually curated; TIGRFAM: type IV / VI secretion system protein, DotU family; KEGG: bgl:bglu_2g01400 hypothetical protein; PFAM: type IV / VI secretion system, DotU YP_003609627.1 PFAM: fimbrial protein; KEGG: bgl:bglu_2g01390 P pilus assembly protein, pilin FimA YP_003609628.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bgl:bglu_2g01380 P pilus assembly protein porin PapC YP_003609629.1 PFAM: Pili assembly chaperone, N-terminal; KEGG: bgl:bglu_2g01370 pili assembly chaperone YP_003609630.1 PFAM: fimbrial protein; KEGG: bgl:bglu_2g01360 fimbrial protein YP_003609631.1 KEGG: bgl:bglu_2g01800 response regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver YP_003609632.1 KEGG: smt:Smal_2899 hypothetical protein YP_003609633.1 PFAM: amino acid permease-associated region; KEGG: sus:acid_5796 arginine/ornithine antiporter YP_003609634.1 PFAM: amino acid permease-associated region; KEGG: bpt:Bpet2426 arginine/ornithine antiporter YP_003609635.1 KEGG: psa:PST_3619 outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003609636.1 PFAM: acriflavin resistance protein; KEGG: psa:PST_3618 RND efflux transporter YP_003609637.1 KEGG: psa:PST_3617 membrane-fusion protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003609638.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bxe:Bxe_C1370 ParB family protein; SMART: ParB domain protein nuclease YP_003609639.1 KEGG: reu:Reut_C6162 cobyrinic acid a,c-diamide synthase; manually curated; PFAM: cobyrinic acid ac-diamide synthase YP_003609640.1 KEGG: bxe:Bxe_C1368 hypothetical protein YP_003609641.1 PFAM: citrate transporter; KEGG: bid:Bind_1395 citrate transporter YP_003609642.1 PFAM: patatin; KEGG: met:M446_0792 patatin YP_003609643.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bpy:Bphyt_4603 glutathione-dependent formaldehyde-activating GFA YP_003609644.1 KEGG: bcm:Bcenmc03_1670 hypothetical protein YP_003609645.1 KEGG: bpy:Bphyt_4604 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator; SMART: response regulator receiver YP_003609646.1 KEGG: bpy:Bphyt_4605 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_003609647.1 PFAM: Spore germination protein; amino acid permease-associated region; KEGG: bja:bll7311 ArcD2 arginine/ornithine antiporter YP_003609648.1 TIGRFAM: arginine deiminase; KEGG: bja:bll7310 arginine deiminase; PFAM: amidinotransferase YP_003609649.1 KEGG: bxe:Bxe_B1530 hypothetical protein YP_003609650.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4653 major facilitator superfamily MFS_1 YP_003609651.1 PFAM: GAF domain protein; KEGG: bpy:Bphyt_4652 GAF sensor protein YP_003609652.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4651 major facilitator superfamily MFS_1 YP_003609653.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bpy:Bphyt_4650 gamma-glutamyltransferase YP_003609654.1 KEGG: bpy:Bphyt_4649 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003609655.1 KEGG: bxe:Bxe_C1366 hypothetical protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein YP_003609656.1 KEGG: bxe:Bxe_C1365 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003609657.1 KEGG: mpu:MYPU_6400 maltodextrin ABC transporter permease protein MalD YP_003609658.1 KEGG: reu:Reut_A3320 hypothetical protein YP_003609659.1 KEGG: reu:Reut_A3321 hypothetical protein YP_003609660.1 KEGG: msl:Msil_1042 hypothetical protein YP_003609661.1 PFAM: glycoside hydrolase family 10; KEGG: hba:Hbal_2976 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10 YP_003609662.1 PFAM: transport-associated; KEGG: bvi:Bcep1808_5533 transport-associated YP_003609663.1 KEGG: bxe:Bxe_C1313 OmpC family outer membrane porin YP_003609664.1 KEGG: hch:HCH_06913 transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003609665.1 PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_06910 ABC-type sugar transporter, periplasmic component YP_003609666.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rfr:Rfer_1100 binding-protein-dependent transport systems inner membrane component YP_003609667.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rfr:Rfer_1101 binding-protein-dependent transport systems inner membrane component YP_003609668.1 TIGRFAM: beta-galactosidase; KEGG: rfr:Rfer_1102 beta-glucosidase; PFAM: glycoside hydrolase family 1 YP_003609669.1 KEGG: hch:HCH_06906 ABC-type sugar transporter, ATPase components; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA YP_003609670.1 KEGG: bmj:BMULJ_04726 hypothetical protein YP_003609671.1 KEGG: bmj:BMULJ_04727 twitching mobility protein PilT YP_003609672.1 KEGG: vei:Veis_0948 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003609673.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_0944 extracellular solute-binding protein YP_003609674.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: vei:Veis_0945 binding-protein-dependent transport systems inner membrane component YP_003609675.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: vei:Veis_0946 binding-protein-dependent transport systems inner membrane component YP_003609676.1 KEGG: bvi:Bcep1808_3828 ABC transporter; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003609677.1 PFAM: glycoside hydrolase; KEGG: esa:ESA_02100 hypothetical protein YP_003609678.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C1363 D-xylose dehydrogenase YP_003609679.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_C1362 xylono-1,4-lactonase YP_003609680.1 KEGG: bvi:Bcep1808_5603 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003609681.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_03925 permease of the major facilitator superfamily YP_003609682.1 KEGG: bxe:Bxe_C1359 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003609683.1 PFAM: fumarylacetoacetate hydrolase; KEGG: bxe:Bxe_C1358 hypothetical protein YP_003609684.1 PFAM: aldehyde dehydrogenase; KEGG: bxe:Bxe_C1357 betaine-aldehyde dehydrogenase YP_003609686.1 KEGG: bpy:Bphyt_4392 hypothetical protein YP_003609687.1 KEGG: bpy:Bphyt_4512 hypothetical protein YP_003609688.1 PFAM: protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: reh:H16_B0829 hypothetical protein YP_003609689.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bpm:BURPS1710b_2551 hypothetical protein YP_003609690.1 KEGG: bxe:Bxe_B0543 hypothetical protein YP_003609691.1 KEGG: bxe:Bxe_C0025 hypothetical protein YP_003609692.1 PFAM: phosphoesterase; KEGG: bxe:Bxe_B0345 hypothetical protein YP_003609693.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: bxe:Bxe_B0346 cytochrome C peroxidase YP_003609694.1 KEGG: bxe:Bxe_B0347 hypothetical protein YP_003609695.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mgm:Mmc1_2210 NADH dehydrogenase (quinone) YP_003609696.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mgm:Mmc1_2211 membrane bound protein complex subunit MbxG YP_003609697.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: mgm:Mmc1_2212 monovalent cation/H+ antiporter subunit B YP_003609698.1 KEGG: mgm:Mmc1_2214 monovalent cation/H+ antiporter subunit G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit YP_003609699.1 KEGG: tsi:TSIB_1914 membrane-bound NADP+-reducing complex MBX, subunit MbxD (Na+/H+ transporter subunit) YP_003609700.1 PFAM: multiple resistance and pH regulation protein F; KEGG: mgm:Mmc1_2215 multiple resistance and pH regulation protein F YP_003609701.1 PFAM: cation antiporter; KEGG: mgm:Mmc1_2216 membrane bound protein complex subunit MbxA YP_003609702.1 KEGG: bpy:Bphyt_2043 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003609703.1 KEGG: bpy:Bphyt_6221 protein of unknown function DUF190 YP_003609704.1 KEGG: hypothetical protein YP_003609705.1 KEGG: aeh:Mlg_1805 peptide chain release factor 2 YP_003609706.1 PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: rso:RS04779 hypothetical protein YP_003609707.1 KEGG: rso:RS04778 transcription regulator protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_003609708.1 KEGG: mlo:mlr1480 hypothetical protein YP_003609709.1 KEGG: mlo:mlr1481 RNA polymerase sigma subunit; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_003609710.1 PFAM: isochorismatase hydrolase; KEGG: nml:Namu_2817 isochorismatase hydrolase YP_003609711.1 KEGG: mjl:Mjls_4102 amidohydrolase 2 YP_003609712.1 KEGG: kinesin motor protein-related YP_003609713.1 KEGG: bgl:bglu_2g08870 transcriptional regulator, LacI family protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003609714.1 PFAM: dihydrodipicolinate synthetase; KEGG: bgl:bglu_2g08880 dihydrodipicolinate synthetase YP_003609715.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgl:bglu_2g08890 major facilitator superfamily MFS_1 YP_003609716.1 KEGG: bgl:bglu_2g08900 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein YP_003609717.1 PFAM: Tetracycline transcriptional regulator YcdC domain protein; regulatory protein TetR; KEGG: bte:BTH_II2128 TetR family transcriptional regulator YP_003609718.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bph:Bphy_1536 allantoate amidohydrolase; PFAM: peptidase M20 YP_003609719.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bch:Bcen2424_6235 oxidoreductase YP_003609720.1 KEGG: bvi:Bcep1808_5511 dihydropyrimidine dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003609721.1 KEGG: bpy:Bphyt_2688 NCS1 nucleoside transporter family; TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin YP_003609722.1 KEGG: bch:Bcen2424_6238 phenylhydantoinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase YP_003609723.1 KEGG: bmj:BMULJ_04209 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003609724.1 PFAM: protein of unknown function DUF296; KEGG: bxe:Bxe_B2660 hypothetical protein YP_003609725.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bcj:BCAM0547 LysE type translocator YP_003609726.1 KEGG: bmu:Bmul_5982 glycoside hydrolase family protein YP_003609727.1 KEGG: bgl:bglu_1g22450 hypothetical protein YP_003609728.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bpy:Bphyt_1024 type I phosphodiesterase/nucleotide pyrophosphatase YP_003609729.1 PFAM: protein of unknown function DUF427; KEGG: bac:BamMC406_3922 hypothetical protein YP_003609730.1 KEGG: bph:Bphy_6451 hypothetical protein YP_003609731.1 KEGG: bph:Bphy_6394 hypothetical protein YP_003609732.1 PFAM: glycosyl transferase group 1; KEGG: reu:Reut_A0691 glycosyl transferase, group 1 YP_003609733.1 KEGG: rpi:Rpic_3607 hypothetical protein YP_003609734.1 SMART: pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: psp:PSPPH_3927 quinoprotein glucose dehydrogenase; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone YP_003609735.1 KEGG: sme:SMc04299 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_003609736.1 KEGG: bxe:Bxe_A2693 short chain oxidoreductase YP_003609737.1 KEGG: bph:Bphy_4773 hypothetical protein YP_003609738.1 KEGG: bpy:Bphyt_2361 hypothetical protein YP_003609739.1 KEGG: bpr:GBP346_A1533 hypothetical protein YP_003609740.1 KEGG: GI10063 gene product from transcript GI10063-RA YP_003609741.1 KEGG: bgl:bglu_2g03420 Mn-containing catalase; PFAM: manganese containing catalase YP_003609742.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; globin; oxidoreductase FAD-binding domain protein; KEGG: bmj:BMULJ_05966 nitric oxide dioxygenase YP_003609743.1 KEGG: xcv:XCV2566 metallo-beta-lactamase superfamily protein YP_003609744.1 KEGG: bph:Bphy_4769 hypothetical protein YP_003609745.1 PFAM: Tannase and feruloyl esterase; KEGG: bpy:Bphyt_4018 feruloyl esterase YP_003609746.1 PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_4019 porin gram-negative type YP_003609747.1 KEGG: art:Arth_1056 SARP family transcriptional regulator YP_003609748.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: reh:H16_B2020 hypothetical protein YP_003609749.1 KEGG: bph:Bphy_4774 oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_003609750.1 KEGG: GH24633 gene product from transcript GH24633-RA YP_003609751.1 KEGG: bcj:BCAS0429 hypothetical protein YP_003609752.1 KEGG: bgl:bglu_2g07110 succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_003609753.1 KEGG: rpi:Rpic_1744 protein of unknown function DUF326 YP_003609754.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bam:Bamb_4647 LysR family transcriptional regulator YP_003609755.1 PFAM: protein of unknown function DUF849; KEGG: bph:Bphy_1080 hypothetical protein YP_003609756.1 KEGG: bte:BTH_I2658 protease signal peptide protein; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003609757.1 KEGG: hypothetical protein YP_003609758.1 KEGG: bph:Bphy_6372 LacI family transcription regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_003609759.1 PFAM: extracellular solute-binding protein family 1; KEGG: bph:Bphy_6371 extracellular solute-binding protein YP_003609760.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_6370 binding-protein-dependent transport systems inner membrane component YP_003609761.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bph:Bphy_6369 binding-protein-dependent transport systems inner membrane component YP_003609762.1 KEGG: bph:Bphy_6368 hypothetical protein YP_003609763.1 KEGG: bph:Bphy_6367 ABC transporter; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003609764.1 KEGG: bph:Bphy_6366 ABC transporter; PFAM: ABC transporter related; transport-associated OB domain protein; SMART: AAA ATPase YP_003609765.1 KEGG: bph:Bphy_6365 dihydroxyacetone kinase, L subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase YP_003609766.1 TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: bph:Bphy_6364 dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase YP_003609767.1 KEGG: conserved hypothetical protein YP_003609768.1 KEGG: hypothetical protein YP_003609769.1 PFAM: OsmC family protein; KEGG: bam:Bamb_5525 OsmC family protein YP_003609770.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: mno:Mnod_8441 alcohol dehydrogenase GroES domain protein YP_003609771.1 KEGG: pol:Bpro_5167 hypothetical protein YP_003609772.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pol:Bpro_5176 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_003609773.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: aba:acid345_3073 zinc-binding alcohol dehydrogenase YP_003609774.1 PFAM: carboxymuconolactone decarboxylase; KEGG: reh:H16_A1800 hypothetical protein YP_003609775.1 PFAM: nitroreductase; KEGG: bmj:BMULJ_04549 nitroreductase family protein YP_003609777.1 KEGG: reh:H16_A1803 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003609778.1 KEGG: pol:Bpro_5165 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_003609779.1 KEGG: cbd:CBUD_0809 hypothetical protein YP_003609780.1 PFAM: protein of unknown function UPF0118; KEGG: bpy:Bphyt_0747 protein of unknown function UPF0118 YP_003609781.1 PFAM: regulatory protein TetR; KEGG: bph:Bphy_3540 TetR family transcriptional regulator YP_003609782.1 KEGG: bph:Bphy_3539 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003609783.1 PFAM: acriflavin resistance protein; KEGG: bph:Bphy_3538 acriflavin resistance protein YP_003609784.1 KEGG: bph:Bphy_3537 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003609785.1 PFAM: regulatory protein TetR; KEGG: bph:Bphy_3533 TetR family transcriptional regulator YP_003609786.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bph:Bphy_3532 glyoxalase/bleomycin resistance protein/dioxygenase YP_003609787.1 PFAM: fumarylacetoacetate hydrolase; KEGG: bph:Bphy_3531 fumarylacetoacetate hydrolase YP_003609788.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bph:Bphy_3530 AMP-binding domain protein YP_003609789.1 PFAM: OmpW family protein; KEGG: bph:Bphy_3509 OmpW family protein YP_003609790.1 KEGG: bph:Bphy_3526 molybdopterin oxidoreductase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_003609791.1 KEGG: bph:Bphy_3525 pyrogallol hydroxytransferase YP_003609792.1 KEGG: bph:Bphy_4181 penicillin amidase; PFAM: peptidase S45 penicillin amidase YP_003609793.1 KEGG: mxa:MXAN_4012 hypothetical protein YP_003609794.1 PFAM: peptidase M4 thermolysin; peptidase M4 thermolysin; KEGG: pfs:PFLU4216 metalloprotease YP_003609795.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_B1335 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II YP_003609796.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bxe:Bxe_C0166 glutathione-dependent formaldehyde dehydrogenase YP_003609797.1 KEGG: bph:Bphy_5168 hypothetical protein YP_003609798.1 PFAM: ParB-like nuclease; KEGG: cti:RALTA_B2101 conserved hypothetical protein, COG4318 YP_003609799.1 KEGG: similar to homeodomain-containing protein YP_003609800.1 PFAM: formate/nitrite transporter; KEGG: bph:Bphy_4770 transporter, YfdC-like protein YP_003609801.1 KEGG: bga:BG0138 penicillin-binding protein YP_003609802.1 KEGG: bph:Bphy_4762 phasin family protein; TIGRFAM: phasin family protein; PFAM: Phasin YP_003609803.1 KEGG: bph:Bphy_5271 hypothetical protein YP_003609804.1 PFAM: protein of unknown function DUF892; KEGG: bgl:bglu_2g07090 hypothetical protein YP_003609805.1 KEGG: bxe:Bxe_B1102 hypothetical protein YP_003609806.1 KEGG: bph:Bphy_5182 hypothetical protein YP_003609807.1 KEGG: bph:Bphy_5181 adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein YP_003609808.1 KEGG: bph:Bphy_5861 filamentous haemagglutinin outer membrane protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; GLUG domain protein YP_003609809.1 KEGG: mxa:MXAN_0497 hypothetical protein YP_003609810.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: bcm:Bcenmc03_4982 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein YP_003609811.1 KEGG: hypothetical protein YP_003609812.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: bph:Bphy_6401 resolvase domain-containing protein YP_003609813.1 KEGG: reu:Reut_B4126 hypothetical protein YP_003609814.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgl:bglu_1g14960 NAD-dependent epimerase/dehydratase YP_003609815.1 PFAM: glycosyl transferase group 1; KEGG: bph:Bphy_5244 glycosyl transferase group 1 YP_003609816.1 PFAM: glycosyl transferase family 9; KEGG: bgl:bglu_1g14980 glycosyl transferase, family 9 YP_003609817.1 PFAM: glycosyl transferase family 2; KEGG: bph:Bphy_5246 glycosyl transferase YP_003609818.1 PFAM: carbamoyltransferase; KEGG: bgl:bglu_1g15000 carbamoyltransferase YP_003609819.1 PFAM: glycosyl transferase family 9; KEGG: bgl:bglu_1g15010 glycosyl transferase, family 9 YP_003609820.1 KEGG: bgl:bglu_1g15020 hydrolase, HAD-superfamily, subfamily IIIA; TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003609821.1 PFAM: glycosyl transferase group 1; KEGG: bgl:bglu_1g15030 glycosyl transferase, group 1 YP_003609822.1 KEGG: bgl:bglu_1g15040 response regulator receiver protein; PFAM: ABC transporter; ABC transporter transmembrane region; response regulator receiver; SMART: response regulator receiver; ATPase AAA YP_003609823.1 PFAM: glycosyl transferase family 2; KEGG: bgl:bglu_1g15050 glycosyl transferase, family 2 YP_003609824.1 PFAM: LmbE family protein; KEGG: bgl:bglu_1g15060 LmbE-like protein YP_003609825.1 PFAM: NADPH-dependent FMN reductase; KEGG: bxe:Bxe_C0075 hypothetical protein YP_003609826.1 PFAM: phosphatidylserine decarboxylase-related; KEGG: bxe:Bxe_C0076 phosphatidylserine decarboxylase YP_003609827.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; chemotaxis protein CheB; MCP methyltransferase CheR-type; PAS fold domain protein; response regulator receiver; KEGG: bph:Bphy_6399 signal transduction histidine kinase with CheB and CheR activity; SMART: MCP methyltransferase CheR-type; PAS domain containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver YP_003609828.1 KEGG: bph:Bphy_6398 chemotaxis protein CheB; PFAM: chemotaxis protein CheB YP_003609829.1 PFAM: chemotaxis protein CheB; MCP methyltransferase CheR-type; hypothetical protein; GAF domain protein; KEGG: bph:Bphy_5175 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type; GAF domain protein YP_003609830.1 PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_C1281 glycosyl transferase YP_003609831.1 PFAM: hemerythrin HHE cation binding domain protein; KEGG: bpy:Bphyt_4232 hemerythrin HHE cation binding domain protein YP_003609832.1 KEGG: bxe:Bxe_B1305 hypothetical protein YP_003609833.1 KEGG: bpy:Bphyt_2353 hypothetical protein YP_003609834.1 KEGG: bxe:Bxe_C0163 NAD synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase YP_003609835.1 PFAM: damage inducible protein CinA; KEGG: bxe:Bxe_C0164 competence/damage-inducible protein CinA YP_003609836.1 SMART: ribosomal RNA adenine methylase transferase-like; TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: bxe:Bxe_C1280 protein-L-isoaspartate (D-aspartate) O-methyltransferase; PFAM: Erythromycin esterase; protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_003609837.1 KEGG: hypothetical protein YP_003609838.1 PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_C0172 CPA1 family Na(+)/H(+) antiporter YP_003609839.1 KEGG: bph:Bphy_7220 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_003609840.1 KEGG: bam:Bamb_6273 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_003609841.1 KEGG: bph:Bphy_6879 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003609842.1 PFAM: pyrrolo-quinoline quinone; KEGG: aba:acid345_4776 hypothetical protein YP_003609844.1 KEGG: dsy:DSY3015 hypothetical protein YP_003609845.1 PFAM: polysaccharide biosynthesis protein; KEGG: bpy:Bphyt_0849 polysaccharide biosynthesis protein YP_003609846.1 TIGRFAM: UDP-galactopyranose mutase; KEGG: bpy:Bphyt_0851 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003609847.1 KEGG: met:M446_5439 hypothetical protein YP_003609848.1 KEGG: bph:Bphy_6719 hypothetical protein YP_003609849.1 PFAM: glycosyl transferase family 2; KEGG: shw:Sputw3181_0057 glycosyl transferase YP_003609850.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_6282 major facilitator superfamily MFS_1 YP_003609851.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_6283 major facilitator superfamily MFS_1 YP_003609852.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: bpy:Bphyt_6284 mandelate racemase/muconate lactonizing protein YP_003609853.1 KEGG: bpy:Bphyt_6285 transcriptional regulator, GntR family; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003609854.1 KEGG: rme:Rmet_2595 hypothetical protein YP_003609855.1 KEGG: bph:Bphy_3754 hypothetical protein YP_003609856.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: aca:ACP_1955 oxidoreductase, Gfo/Idh/MocA family YP_003609857.1 KEGG: bph:Bphy_5237 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003609858.1 KEGG: bph:Bphy_5238 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003609859.1 SMART: helix-turn-helix domain protein; KEGG: bph:Bphy_6148 XRE family transcriptional regulator YP_003609860.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bph:Bphy_6147 NAD-dependent epimerase/dehydratase YP_003609861.1 KEGG: bpy:Bphyt_6062 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003609862.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: bxe:Bxe_C1289 hypothetical protein YP_003609863.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: bpt:Bpet3796 DNA-binding protein YP_003609864.1 KEGG: bpt:Bpet4395 hypothetical protein YP_003609865.1 KEGG: bxe:Bxe_A3107 hypothetical protein YP_003609866.1 KEGG: DNA binding protein YP_003609867.1 PFAM: Gp37Gp68 family protein; KEGG: rsq:Rsph17025_1728 phage Gp37Gp68 family protein YP_003609868.1 KEGG: mjl:Mjls_5315 luciferase family protein YP_003609869.1 KEGG: reu:Reut_A2373 hypothetical protein YP_003609870.1 PFAM: DNA single-strand annealing protein RecT-like; KEGG: sty:STY2074 hypothetical protein YP_003609871.1 KEGG: bph:Bphy_3414 phage-related protein endonuclease-like protein; TIGRFAM: phage-type endonuclease; PFAM: YqaJ viral recombinase family YP_003609872.1 KEGG: cja:CJA_2055 oligopeptide ABC transporter permease protein YP_003609873.1 KEGG: met:M446_6630 NUDIX hydrolase YP_003609874.1 KEGG: tfu:Tfu_0805 metal-dependent phosphohydrolase, HD region YP_003609875.1 KEGG: bxe:Bxe_B0795 LysR family transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_003609876.1 KEGG: phe:Phep_1545 protein of unknown function DUF37; manually curated; PFAM: protein of unknown function DUF37 YP_003609877.1 KEGG: pfo:Pfl01_2135 hypothetical protein YP_003609878.1 KEGG: plu:plu3476 hypothetical protein YP_003609879.1 KEGG: bpd:BURPS668_A2365 hypothetical protein YP_003609880.1 KEGG: bpd:BURPS668_A2364 hypothetical protein YP_003609881.1 KEGG: ctt:CtCNB1_1438 hypothetical protein YP_003609883.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: bte:BTH_II1030 GP57 YP_003609884.1 KEGG: gvi:glr3165 glycosyl transferase YP_003609885.1 KEGG: har:HEAR2292 hypothetical protein YP_003609886.1 KEGG: bxe:Bxe_A3081 hypothetical protein YP_003609887.1 KEGG: acp:A2cp1_0270 general secretory system II protein E domain protein YP_003609888.1 KEGG: bbr:BB1685 hypothetical protein YP_003609889.1 KEGG: bmj:BMULJ_04641 hypothetical protein YP_003609890.1 KEGG: sgr:SGR_2752 serine/threonine protein kinase YP_003609891.1 KEGG: GJ22588 gene product from transcript GJ22588-RA YP_003609892.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: hmo:HM1_2946 DNA methylase YP_003609893.1 manually curated; KEGG: reu:Reut_A2387 hypothetical protein YP_003609894.1 KEGG: rpf:Rpic12D_2266 phage uncharacterized protein; TIGRFAM: phage uncharacterized protein; PFAM: protein of unknown function DUF264 YP_003609895.1 KEGG: xfa:XF1676 hypothetical protein; TIGRFAM: phage-associated protein, HI1409 family; PFAM: protein of unknown function DUF2212; Phage-related protein, HI1409, conserved region YP_003609896.1 KEGG: xfm:Xfasm12_1305 plasmid-related protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7 YP_003609897.1 PFAM: protein of unknown function DUF2213; KEGG: xfn:XfasM23_1036 hypothetical protein YP_003609898.1 KEGG: xfa:XF1681 hypothetical protein YP_003609899.1 PFAM: protein of unknown function DUF2184; KEGG: xfa:XF1682 hypothetical protein YP_003609900.1 KEGG: hypothetical protein YP_003609901.1 KEGG: xfa:XF1684 hypothetical protein YP_003609902.1 KEGG: xfn:XfasM23_1031 hypothetical protein YP_003609903.1 KEGG: xft:PD0974 hypothetical protein YP_003609904.1 KEGG: xfn:XfasM23_1029 hypothetical protein YP_003609905.1 KEGG: xfm:Xfasm12_1296 hypothetical protein YP_003609906.1 KEGG: xfa:XF1689 hypothetical protein YP_003609907.1 KEGG: xfn:XfasM23_1263 hypothetical protein YP_003609908.1 PFAM: tail tape measure protein TP901 core region; KEGG: xfm:Xfasm12_1293 hypothetical protein YP_003609909.1 KEGG: xfn:XfasM23_1022 hypothetical protein YP_003609910.1 KEGG: xfn:XfasM23_1021 hypothetical protein YP_003609911.1 KEGG: pay:PAU_03603 hypothetical protein YP_003609912.1 KEGG: xfa:XF1594 hypothetical protein YP_003609913.1 KEGG: xfa:XF1595 hypothetical protein YP_003609914.1 KEGG: xft:PD0959 hypothetical protein YP_003609915.1 KEGG: xfa:XF1705 hypothetical protein YP_003609916.1 KEGG: bgl:bglu_1g21280 tail fiber protein; PFAM: carbohydrate-binding family V/XII; SMART: carbohydrate-binding family V/XII YP_003609917.1 KEGG: cjd:JJD26997_1146 hypothetical protein YP_003609918.1 KEGG: bbr:BB3484 hypothetical protein YP_003609919.1 KEGG: bpt:Bpet0998 hypothetical protein YP_003609920.1 KEGG: swi:Swit_4467 hypothetical protein YP_003609921.1 PFAM: peptidase M15A; KEGG: bte:BTH_II1066 hypothetical protein YP_003609922.1 PFAM: holin family 2; KEGG: eca:ECA2617 phage lysis protein Y, holin YP_003609923.1 KEGG: bte:BTH_I1922 gp25a YP_003609924.1 PFAM: Limonene-12-epoxide hydrolase; KEGG: bcm:Bcenmc03_4895 limonene-12-epoxide hydrolase YP_003609925.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: atc:AGR_pAT_254 quinone oxidoreductase YP_003609926.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: npu:Npun_F6546 short-chain dehydrogenase/reductase SDR YP_003609927.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reh:H16_A2472 LysR family transcriptional regulator YP_003609928.1 KEGG: bam:Bamb_1208 hypothetical protein YP_003609929.1 KEGG: rfr:Rfer_3056 hypothetical protein YP_003609930.1 PFAM: protein of unknown function DUF159; KEGG: bph:Bphy_7577 hypothetical protein YP_003609931.1 KEGG: msl:Msil_1498 hypothetical protein YP_003609932.1 PFAM: integrase family protein; KEGG: bps:BPSL1157 phage integrase YP_003609933.1 PFAM: protein of unknown function DUF347; KEGG: bxe:Bxe_A3455 hypothetical protein YP_003609934.1 KEGG: pna:Pnap_3248 hypothetical protein YP_003609935.1 KEGG: hypothetical LOC584467; K06528 lysosomal-associated membrane protein 1/2 YP_003609936.1 KEGG: bpd:BURPS668_A2319 hypothetical protein YP_003609937.1 PFAM: Domain of unknown function DUF1929; ricin B lectin; Kelch repeat-containing protein; KEGG: bpd:BURPS668_A2317 heme utilization/adhesion protein; SMART: ricin B lectin; Kelch repeat-containing protein YP_003609938.1 KEGG: bpd:BURPS668_1571 hypothetical protein YP_003609939.1 KEGG: cti:RALTA_A1638 tyrosine-protein kinase (EPS I polysaccharide export protein EpsB); TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_003609941.1 KEGG: rca:Rcas_3938 hypothetical protein YP_003609943.1 KEGG: bpy:Bphyt_0911 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase YP_003609944.1 PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_6180 glycosyl transferase, group 1 YP_003609945.1 KEGG: bte:BTH_I1358 glycosyltransferase YP_003609946.1 PFAM: glycosyl transferase group 1; KEGG: bte:BTH_I1358 glycosyltransferase YP_003609947.1 PFAM: polysaccharide deacetylase; KEGG: bac:BamMC406_1121 polysaccharide deacetylase YP_003609948.1 KEGG: cti:RALTA_A1638 tyrosine-protein kinase (EPS I polysaccharide export protein EpsB); TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_003609949.1 manually curated; KEGG: bam:Bamb_6176 hypothetical protein YP_003609950.1 KEGG: sgl:SG0984 hypothetical protein YP_003609951.1 KEGG: bch:Bcen2424_0243 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_003609952.1 KEGG: bpy:Bphyt_6227 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003609953.1 PFAM: inner-membrane translocator; KEGG: bph:Bphy_1149 monosaccharide-transporting ATPase YP_003609954.1 KEGG: bpy:Bphyt_6225 ABC-type sugar transporter periplasmic component-like protein YP_003609955.1 PFAM: uracil-DNA glycosylase; KEGG: bpy:Bphyt_4694 uracil-DNA glycosylase YP_003609956.1 PFAM: protein of unknown function DUF1130; KEGG: bpy:Bphyt_4695 protein of unknown function DUF1130 YP_003609957.1 PFAM: major facilitator superfamily MFS_1; KEGG: mno:Mnod_1309 major facilitator superfamily MFS_1 YP_003609958.1 TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: Taurine-binding periplasmic protein precursor, SMART: extracellular solute-binding protein family 3 YP_003609959.1 PFAM: NLPA lipoprotein; KEGG: bph:Bphy_5040 NlpA lipoprotein YP_003609960.1 KEGG: bxe:Bxe_C0119 hypothetical protein YP_003609961.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: bph:Bphy_7230 oxidoreductase molybdopterin binding YP_003609962.1 KEGG: bph:Bphy_7231 cytochrome C class I YP_003609963.1 KEGG: bph:Bphy_6384 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_003609964.1 PFAM: monooxygenase FAD-binding; Phenol hydroxylase domain protein dimerisation; KEGG: bph:Bphy_6383 phenol 2-monooxygenase YP_003609965.1 KEGG: bph:Bphy_3661 hypothetical protein YP_003609966.1 PFAM: extracellular solute-binding protein family 5; KEGG: bgl:bglu_1g12270 extracellular solute-binding protein, family 5 YP_003609968.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4304 major facilitator transporter YP_003609969.1 KEGG: bph:Bphy_4051 beta-lactamase domain-containing protein YP_003609970.1 KEGG: bac:BamMC406_0716 hypothetical protein YP_003609971.1 PFAM: monooxygenase FAD-binding; KEGG: bch:Bcen2424_0817 FAD-dependent oxidoreductase YP_003609972.1 KEGG: rpf:Rpic12D_2988 signal peptide protein YP_003609973.1 KEGG: bcm:Bcenmc03_5659 alcohol dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein YP_003609974.1 PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: rso:RS02985 hydrolase transmembrane protein YP_003609975.1 PFAM: protein of unknown function DUF1810; KEGG: bpy:Bphyt_2042 protein of unknown function DUF1810 YP_003609976.1 KEGG: bcm:Bcenmc03_2781 hypothetical protein YP_003609977.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bac:BamMC406_2690 acetoacetyl-CoA reductase YP_003609978.1 PFAM: NnrS family protein; KEGG: bpr:GBP346_A2881 heme/copper membrane protein YP_003609979.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: bph:Bphy_5897 guanine-specific ribonuclease N1 and T1 YP_003609980.1 KEGG: bxe:Bxe_B2833 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003609981.1 KEGG: bph:Bphy_6802 hypothetical protein YP_003609982.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mes:Meso_1173 NADH:flavin oxidoreductase/NADH oxidase YP_003609983.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: bvi:Bcep1808_6618 lysine exporter protein LysE/YggA YP_003609984.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpi:Rpic_3636 LysR family transcriptional regulator YP_003609985.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rlg:Rleg_5754 LysR family transcriptional regulator YP_003609986.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aba:acid345_2266 short-chain dehydrogenase/reductase SDR YP_003609987.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: sus:acid_4478 NADP oxidoreductase, coenzyme F420-dependent YP_003609988.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B0401 short-chain dehydrogenase, oxidoreductase YP_003609989.1 KEGG: bxe:Bxe_B0402 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003609990.1 PFAM: Na+/Picotransporter; PhoU family protein; KEGG: bja:bll4444 hypothetical protein YP_003609991.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: spq:SPAB_03157 hypothetical protein YP_003609992.1 KEGG: sec:SC0468 2-aminoethylphosphonate transporter memrane component; TIGRFAM: 2-aminoethylphosphonate ABC transporter permease protein; PFAM: binding-protein-dependent transporters inner membrane component YP_003609993.1 KEGG: kpu:KP1_5431 2-aminoethylphosphonate transporter ATP-binding component; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA YP_003609994.1 KEGG: kpu:KP1_5432 2-aminoethylphosphonate transport system periplasmic binding component; TIGRFAM: 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate binding protein; PFAM: extracellular solute-binding protein family 1 YP_003609995.1 KEGG: smd:Smed_4876 aldehyde dehydrogenase; TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003609996.1 KEGG: sme:SM_b21538 phosphonoacetate hydrolase protein; TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase YP_003609997.1 KEGG: pfl:PFL_3965 2-aminoethylphosphonate--pyruvate transaminase; TIGRFAM: 2-aminoethylphosphonate/pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V YP_003609998.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvm:DvMF_0944 protein of unknown function DUF6 transmembrane YP_003609999.1 KEGG: smd:Smed_4870 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003610000.1 KEGG: bpy:Bphyt_4986 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_003610001.1 PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: bxe:Bxe_B1666 dehydrogenase YP_003610002.1 KEGG: bph:Bphy_3244 transport-associated; PFAM: transport-associated; SMART: transport-associated and nodulation region YP_003610003.1 KEGG: rec:RHECIAT_CH0003508 hypothetical protein YP_003610004.1 SMART: regulatory protein LuxR; KEGG: bmj:BMULJ_05437 hypothetical protein YP_003610005.1 PFAM: pyridoxal-dependent decarboxylase; KEGG: mlo:mlr4653 aromatic-L-amino-acid decarboxylase YP_003610006.1 KEGG: bph:Bphy_4588 TPR repeat-containing adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; TPR repeat-containing protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; Tetratricopeptide repeat YP_003610007.1 PFAM: indigoidine synthase A; KEGG: reh:H16_B2031 indigoidine synthase A like protein YP_003610008.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: rme:Rmet_4484 bifunctional deaminase-reductase-like protein YP_003610009.1 KEGG: bph:Bphy_6432 hypothetical protein YP_003610010.1 KEGG: bpy:Bphyt_5870 aminotransferase class V YP_003610011.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bpy:Bphyt_4095 NADH:flavin oxidoreductase/NADH oxidase YP_003610012.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfs:PFLU3922 LysR family transcriptional regulator YP_003610013.1 PFAM: nitrogen regulatory protein P-II; KEGG: bpy:Bphyt_0525 nitrogen regulatory protein P-II YP_003610014.1 KEGG: bxe:Bxe_A4189 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_003610015.1 KEGG: bph:Bphy_3739 hypothetical protein YP_003610016.1 KEGG: Pc22g03720 YP_003610017.1 KEGG: bph:Bphy_3762 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_003610018.1 PFAM: ATP-NAD/AcoX kinase; KEGG: bph:Bphy_3761 ATP-NAD/AcoX kinase YP_003610019.1 KEGG: bpy:Bphyt_5920 pyruvate dehydrogenase (acetyl-transferring); PFAM: dehydrogenase E1 component YP_003610020.1 PFAM: transketolase; transketolase domain protein; KEGG: bpy:Bphyt_5919 transketolase YP_003610021.1 PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: bph:Bphy_3758 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_003610022.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: bxe:Bxe_B0316 lipoyl synthase; PFAM: radical SAM domain protein YP_003610023.1 KEGG: bpy:Bphyt_6751 chromosome segregation ATPase-like protein YP_003610024.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_5636 LysR family transcriptional regulator YP_003610025.1 PFAM: sodium:dicarboxylate symporter; KEGG: bpy:Bphyt_6735 sodium:dicarboxylate symporter YP_003610026.1 KEGG: bpy:Bphyt_6736 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003610027.1 KEGG: bph:Bphy_5639 aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like YP_003610028.1 TIGRFAM: L-asparaginase, type II; KEGG: bgl:bglu_2g18200 probable L-asparaginase; PFAM: asparaginase/glutaminase YP_003610029.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; KEGG: bph:Bphy_5239 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver YP_003610030.1 KEGG: bph:Bphy_4596 hypothetical protein YP_003610031.1 KEGG: bph:Bphy_5025 cyclic nucleotide-binding; PFAM: cyclic nucleotide-binding; sulfate transporter; sulfate transporter/antisigma-factor antagonist STAS; SMART: cyclic nucleotide-binding YP_003610032.1 KEGG: bph:Bphy_4588 TPR repeat-containing adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; Tetratricopeptide repeat YP_003610033.1 KEGG: azo:azo0016 hypothetical protein YP_003610034.1 KEGG: gau:GAU_1120 hypothetical membrane protein YP_003610035.1 KEGG: bpy:Bphyt_2294 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003610036.1 PFAM: acriflavin resistance protein; KEGG: bph:Bphy_1266 acriflavin resistance protein YP_003610037.1 KEGG: bxe:Bxe_A1968 multidrug efflux pump, membrane fusion protein CzcB subfamily; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD YP_003610038.1 PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce2530 acyl-CoA synthetase YP_003610039.1 PFAM: fatty acid desaturase; KEGG: cpi:Cpin_0156 fatty acid desaturase YP_003610040.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: stp:Strop_4143 phosphoenolpyruvate synthase YP_003610041.1 KEGG: saq:Sare_3011 DNA polymerase subunit beta YP_003610042.1 PFAM: Male sterility domain; KEGG: stp:Strop_4147 hypothetical protein YP_003610043.1 KEGG: rpe:RPE_0479 major facilitator transporter YP_003610044.1 KEGG: ckr:CKR_1291 hypothetical protein YP_003610045.1 KEGG: pla:Plav_1641 hypothetical protein YP_003610046.1 KEGG: mla:Mlab_0788 beta-ribofuranosylaminobenzene 5'-phosphate synthase YP_003610047.1 KEGG: geo:Geob_1909 radical SAM protein; PFAM: radical SAM protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003610048.1 KEGG: tai:Taci_0642 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003610049.1 PFAM: thymidylate kinase; KEGG: smr:Smar_0624 thymidylate kinase YP_003610050.1 KEGG: bph:Bphy_7076 hypothetical protein YP_003610051.1 KEGG: reh:H16_B1084 AsnC family transcriptional regulator; PFAM: transcription regulator, AsnC-type-like; SMART: transcription regulator, AsnC-type YP_003610052.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: reh:H16_B1083 4-hydroxyphenylpyruvate dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003610053.1 PFAM: amino acid permease-associated region; KEGG: bte:BTH_II1594 aromatic amino acid transporter YP_003610054.1 PFAM: aminotransferase class I and II; KEGG: bac:BamMC406_4233 aromatic amino acid aminotransferase YP_003610055.1 PFAM: patatin; KEGG: azc:AZC_4576 hypothetical protein YP_003610056.1 KEGG: acp:A2cp1_2484 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003610057.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bmj:BMULJ_05396 LysR family transcriptional regulator YP_003610058.1 KEGG: bpy:Bphyt_5626 tricarballylate dehydrogenase; TIGRFAM: precorrin 3B synthase CobZ; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003610059.1 TIGRFAM: CitB domain protein; KEGG: bac:BamMC406_5879 CitB domain-containing protein YP_003610060.1 KEGG: bpy:Bphyt_5624 metabolite/H+ symporter, major facilitator superfamily (MFS); TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter YP_003610061.1 PFAM: regulatory protein TetR; KEGG: mjl:Mjls_2640 TetR family transcriptional regulator YP_003610062.1 KEGG: azc:AZC_1915 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein YP_003610063.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: bch:Bcen2424_4529 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_003610064.1 KEGG: bcj:BCAM1712 3-hydroxy-acyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein YP_003610065.1 KEGG: bmj:BMULJ_05165 beta-ketoadipyl CoA thiolase; TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase YP_003610066.1 KEGG: bph:Bphy_2689 phenylacetic acid degradation protein PaaN; TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: aldehyde dehydrogenase YP_003610067.1 KEGG: bxe:Bxe_A0291 phenylacetic acid degradation NADH oxidoreductase PaaE; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein YP_003610068.1 KEGG: bxe:Bxe_A0292 phenylacetic acid degradation protein PaaD; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59 YP_003610069.1 KEGG: bpy:Bphyt_3664 phenylacetate-CoA oxygenase, PaaI subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein YP_003610070.1 KEGG: bpy:Bphyt_3663 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B YP_003610071.1 KEGG: bph:Bphy_2857 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein YP_003610072.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B1273 oxidoreductase YP_003610073.1 PFAM: nitroreductase; KEGG: bpy:Bphyt_5600 nitroreductase YP_003610074.1 KEGG: bph:Bphy_5813 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003610075.1 PFAM: aminoglycoside phosphotransferase; KEGG: bph:Bphy_1115 hypothetical protein YP_003610076.1 KEGG: bph:Bphy_7036 hypothetical protein YP_003610077.1 KEGG: bph:Bphy_5888 CBS domain-containing protein; PFAM: CBS domain containing protein; transport-associated; SMART: CBS domain containing protein YP_003610078.1 KEGG: bpm:BURPS1710b_2086 siderophore related no-ribosomal peptide synthase YP_003610079.1 PFAM: UspA domain protein; KEGG: bte:BTH_II1567 universal stress protein YP_003610080.1 PFAM: phosphoribosyltransferase; KEGG: bcm:Bcenmc03_1249 phosphoribosyltransferase YP_003610081.1 manually curated; PFAM: CBS domain containing protein; KEGG: bpl:BURPS1106A_A3091 CBS domain-containing protein; SMART: CBS domain containing protein YP_003610082.1 KEGG: bxe:Bxe_A1905 hypothetical protein YP_003610083.1 PFAM: polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: bph:Bphy_5860 polypeptide-transport-associated domain-containing protein YP_003610084.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; hypothetical protein; KEGG: bvi:Bcep1808_5745 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_003610085.1 KEGG: mms:mma_0952 cytochrome b561; manually curated; PFAM: cytochrome B561 YP_003610086.1 PFAM: cytochrome B561; KEGG: bxe:Bxe_B2745 cytochrome b561 YP_003610087.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bxe:Bxe_B1027 hypothetical protein YP_003610088.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bph:Bphy_5807 protein of unknown function DUF395 YeeE/YedE YP_003610089.1 PFAM: protein of unknown function DUF81; KEGG: bxe:Bxe_B0673 hypothetical protein YP_003610090.1 KEGG: bxe:Bxe_B0675 metallo-beta-lactamase YP_003610091.1 KEGG: bxe:Bxe_B0676 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold-4 domain protein; helix-turn-helix Fis-type; SMART: ATPase AAA; PAS domain containing protein YP_003610092.1 KEGG: bgl:bglu_2g03220 lipoprotein YP_003610093.1 KEGG: bph:Bphy_7698 hypothetical protein YP_003610094.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: bph:Bphy_7700 multi-sensor signal transduction histidine kinase; SMART: response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein YP_003610095.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: bph:Bphy_5184 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver YP_003610096.1 KEGG: bph:Bphy_5185 signal peptide protein YP_003610097.1 KEGG: bph:Bphy_4771 hypothetical protein YP_003610098.1 KEGG: cti:RALTA_A1622 homospermidine synthase (HSS); PFAM: homospermidine synthase YP_003610099.1 PFAM: FAD dependent oxidoreductase; KEGG: cti:RALTA_A1621 gamma-Glu-putrescine oxidase FAD/NAD(P)-binding YP_003610100.1 KEGG: bpy:Bphyt_5734 hypothetical protein YP_003610101.1 PFAM: heat shock protein Hsp20; KEGG: bgl:bglu_2g21010 heat shock protein, HSP20 family protein YP_003610102.1 PFAM: heat shock protein Hsp20; KEGG: bgl:bglu_2g21000 small heat shock protein, HSP20 family protein YP_003610103.1 PFAM: heat shock protein Hsp20; KEGG: bgl:bglu_2g20990 heat shock protein HSP20 YP_003610105.1 KEGG: bph:Bphy_4790 hypothetical protein YP_003610106.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bpd:BURPS668_A2916 S-(hydroxymethyl)glutathione dehydrogenase YP_003610107.1 KEGG: bph:Bphy_4792 cytochrome C oxidase subunit II; TIGRFAM: cytochrome C oxidase subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C class I YP_003610108.1 TIGRFAM: cytochrome C oxidase subunit I; KEGG: bxe:Bxe_C0168 cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_003610109.1 KEGG: bac:BamMC406_6538 hypothetical protein YP_003610110.1 KEGG: bmj:BMULJ_05923 hypothetical protein YP_003610112.1 KEGG: bac:BamMC406_6541 hypothetical protein YP_003610113.1 KEGG: bac:BamMC406_6542 hypothetical protein YP_003610114.1 KEGG: rpf:Rpic12D_5216 P4 alpha zinc-binding domain protein; PFAM: P4 alpha zinc-binding domain protein; SMART: P4 alpha zinc-binding domain protein YP_003610115.1 KEGG: bxe:Bxe_A4106 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_003610116.1 KEGG: bac:BamMC406_6545 hypothetical protein YP_003610117.1 KEGG: rme:Rmet_6280 hypothetical protein YP_003610118.1 KEGG: hypothetical protein YP_003610119.1 PFAM: NERD domain protein; KEGG: bmj:BMULJ_05932 hypothetical protein YP_003610120.1 manually curated; KEGG: hypothetical protein YP_003610121.1 KEGG: bac:BamMC406_6550 hypothetical protein YP_003610122.1 KEGG: hypothetical protein YP_003610123.1 KEGG: hypothetical protein YP_003610124.1 KEGG: hypothetical protein YP_003610125.1 KEGG: hypothetical protein YP_003610126.1 KEGG: bvi:Bcep1808_7070 hypothetical protein YP_003610127.1 KEGG: bac:BamMC406_6558 hypothetical protein YP_003610128.1 KEGG: bac:BamMC406_6559 hypothetical protein YP_003610129.1 KEGG: bac:BamMC406_6560 hypothetical protein YP_003610130.1 PFAM: type II secretion system protein E; KEGG: bac:BamMC406_6561 type II secretion system protein E YP_003610131.1 KEGG: hypothetical protein YP_003610132.1 KEGG: bac:BamMC406_6563 hypothetical protein YP_003610133.1 KEGG: bmu:Bmul_5552 type II secretory pathway component PulD-like protein YP_003610134.1 KEGG: hypothetical protein YP_003610135.1 PFAM: lytic transglycosylase catalytic; KEGG: invasion protein iagB precursor YP_003610136.1 KEGG: bac:BamMC406_6567 hypothetical protein YP_003610137.1 PFAM: lytic transglycosylase catalytic; KEGG: bac:BamMC406_6568 lytic transglycosylase catalytic YP_003610138.1 PFAM: conjugation TrbI family protein; KEGG: Conjugal transfer protein trbI YP_003610139.1 PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bac:BamMC406_6570 conjugal transfer protein TrbG/VirB9/CagX YP_003610140.1 KEGG: hypothetical protein YP_003610142.1 PFAM: initiator RepB protein; KEGG: bac:BamMC406_6574 hypothetical protein YP_003610143.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bac:BamMC406_6575 cobyrinic acid ac-diamide synthase YP_003610144.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bac:BamMC406_6576 ParB-like partition protein; SMART: ParB domain protein nuclease YP_003610145.1 KEGG: mgm:Mmc1_0203 Sel1 domain-containing protein YP_003610146.1 KEGG: bph:Bphy_7292 hypothetical protein YP_003610147.1 KEGG: hypothetical protein YP_003610148.1 KEGG: rpi:Rpic_1496 hypothetical protein YP_003610149.1 KEGG: bbr:BB3893 alcaligin biosynthesis enzyme YP_003610150.1 PFAM: major facilitator superfamily MFS_1; KEGG: pmy:Pmen_3771 major facilitator transporter YP_003610151.1 PFAM: Siderophore biosynthesis protein, conserved region; KEGG: bbr:BB3894 alcaligin biosynthesis protein YP_003610152.1 PFAM: IucA/IucC family protein; KEGG: bpe:BP2458 alcaligin biosynthesis protein YP_003610153.1 KEGG: bpa:BPP3446 hypothetical protein YP_003610154.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bpt:Bpet3066 iron-sulfur protein YP_003610155.1 KEGG: ttu:TERTU_3729 peptidase, S8/S53 family YP_003610156.1 KEGG: cak:Caul_0531 TetR family transcriptional regulator YP_003610157.1 KEGG: maq:Maqu_4018 phage integrase YP_003610158.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_3165 transposase IS3/IS911 family protein YP_003610159.1 PFAM: Integrase catalytic region; KEGG: rpd:RPD_0760 integrase catalytic subunit YP_003610160.1 KEGG: pfo:Pfl01_1846 peptide synthase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein YP_003610161.1 KEGG: azc:AZC_3244 efflux transporter inner membrane protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_003610162.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_4962 transposase IS3/IS911 family protein YP_003610163.1 PFAM: fatty acid hydroxylase; KEGG: bph:Bphy_7771 fatty acid hydroxylase YP_003610164.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: bxe:Bxe_C0488 transposase IS116/IS110/IS902 YP_003610165.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: bvi:Bcep1808_5931 hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003610166.1 PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: rpf:Rpic12D_3556 methane/phenol/toluene hydroxylase YP_003610167.1 PFAM: toluene-4-monooxygenase; KEGG: rpf:Rpic12D_3557 toluene-4-monooxygenase system B YP_003610168.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rpf:Rpic12D_3558 Rieske (2Fe-2S) domain protein YP_003610169.1 PFAM: monooxygenase component MmoB/DmpM; KEGG: rpf:Rpic12D_3559 monooxygenase component MmoB/DmpM YP_003610170.1 PFAM: transposase IS4 family protein; KEGG: bpl:BURPS1106A_A2770 transposase, IS4 YP_003610172.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: rpf:Rpic12D_3560 methane/phenol/toluene hydroxylase YP_003610173.1 KEGG: pfs:pQBR0426 transposase TnpA protein; manually curated; PFAM: transposase IS3/IS911 family protein YP_003610174.1 PFAM: IS66 Orf2 family protein; KEGG: bxe:Bxe_A2590 transposase, TnpB YP_003610175.1 PFAM: Resolvase domain; KEGG: pna:Pnap_4704 recombinase YP_003610177.1 KEGG: bph:Bphy_4858 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: ATPase AAA YP_003610178.1 PFAM: Integrase catalytic region; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_A3740 transposase YP_003610179.1 PFAM: IstB domain protein ATP-binding protein; KEGG: bvi:Bcep1808_7156 IstB ATP binding domain-containing protein YP_003610181.1 KEGG: bph:Bphy_7773 hypothetical protein YP_003610182.1 PFAM: fatty acid hydroxylase; KEGG: bph:Bphy_7771 fatty acid hydroxylase YP_003610183.1 KEGG: bch:Bcen2424_3649 transposase IS116/IS110/IS902 family protein YP_003610184.1 KEGG: bph:Bphy_7766 cytochrome P450; manually curated; PFAM: cytochrome P450 YP_003610185.1 PFAM: carboxyl transferase; KEGG: bph:Bphy_7767 carboxyl transferase YP_003610186.1 PFAM: amidase; KEGG: bph:Bphy_7768 amidase YP_003610187.1 PFAM: amine oxidase; KEGG: bph:Bphy_7769 amine oxidase YP_003610188.1 PFAM: acriflavin resistance protein; KEGG: bph:Bphy_7711 acriflavin resistance protein YP_003610189.1 KEGG: bph:Bphy_2410 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_003610190.1 KEGG: bph:Bphy_7713 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_003610191.1 TIGRFAM: adenylylsulfate kinase; KEGG: bph:Bphy_7714 adenylyl-sulfate kinase; PFAM: adenylylsulfate kinase YP_003610192.1 PFAM: carbamoyltransferase; KEGG: bph:Bphy_7715 carbamoyltransferase YP_003610193.1 PFAM: NodS family protein; KEGG: bph:Bphy_7716 NodS family protein YP_003610194.1 PFAM: Nodulation protein A NodA; KEGG: bph:Bphy_7717 acyltransferase NodA YP_003610195.1 KEGG: bph:Bphy_7718 NodH sulfotransferase YP_003610196.1 KEGG: bph:Bphy_7719 ABC transporter; TIGRFAM: ABC-2 type transporter NodJ family; PFAM: ABC transporter YP_003610197.1 TIGRFAM: nodulation ABC transporter NodI; PFAM: ABC transporter related; KEGG: bph:Bphy_7720 nodulation ABC transporter NodI; SMART: ATPase AAA YP_003610198.1 PFAM: glycosyl transferase; KEGG: bph:Bphy_7721 glycosyl transferase YP_003610199.1 PFAM: polysaccharide deacetylase; KEGG: bph:Bphy_7722 polysaccharide deacetylase YP_003610200.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bph:Bphy_7723 LysR family transcriptional regulator YP_003610201.1 KEGG: bph:Bphy_7724 biotin carboxylase YP_003610202.1 KEGG: bph:Bphy_7726 hypothetical protein YP_003610203.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_7727 LysR family transcriptional regulator YP_003610204.1 TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; KEGG: bph:Bphy_7728 transcriptional regulator NifA; SMART: ATPase AAA; GAF domain protein YP_003610205.1 KEGG: bph:Bphy_7729 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1 YP_003610206.1 TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: bph:Bphy_7730 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1 YP_003610207.1 KEGG: bvi:Bcep1808_6022 nitrogen fixation protein NifX; TIGRFAM: nitrogen fixation protein NifX; PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_003610208.1 PFAM: protein of unknown function DUF683; KEGG: pna:Pnap_2321 hypothetical protein YP_003610209.1 KEGG: bph:Bphy_7733 ferredoxin III, nif-specific; TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003610210.1 PFAM: NifQ family protein; KEGG: bph:Bphy_7734 NifQ family protein YP_003610211.1 PFAM: Integrase catalytic region; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_A3740 transposase YP_003610212.1 KEGG: bph:Bphy_4858 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: ATPase AAA YP_003610213.1 KEGG: bxe:Bxe_A0079 hypothetical protein; manually curated; PFAM: IS66 Orf2 family protein YP_003610214.1 KEGG: MOGAT2; monoacylglycerol O-acyltransferase 2 YP_003610215.1 manually curated; KEGG: bam:Bamb_4153 hypothetical protein YP_003610216.1 KEGG: cti:pRALTA_0248 transposase, IS3 family YP_003610217.1 PFAM: IS66 Orf2 family protein; KEGG: bxe:Bxe_A0258 hypothetical protein YP_003610218.1 KEGG: bph:Bphy_7735 tetratricopeptide TPR_2 YP_003610219.1 KEGG: bph:Bphy_7736 ferredoxin YP_003610220.1 KEGG: bph:Bphy_7737 electron-transferring-flavoprotein dehydrogenase; PFAM: thiamine biosynthesis Thi4 protein YP_003610221.1 PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; KEGG: bph:Bphy_7738 electron transfer flavoprotein alpha/beta-subunit YP_003610222.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: bph:Bphy_7739 electron transfer flavoprotein alpha/beta-subunit YP_003610223.1 PFAM: nitrogen fixation protein NifW; KEGG: bph:Bphy_7740 nitrogen fixation protein NifW YP_003610224.1 KEGG: bph:Bphy_7741 homocitrate synthase; TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase YP_003610225.1 KEGG: bph:Bphy_7742 nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; radical SAM domain protein YP_003610226.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bvi:Bcep1808_5995 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003610227.1 KEGG: bph:Bphy_7775 HesB/YadR/YfhF-family protein; manually curated; PFAM: HesB/YadR/YfhF-family protein YP_003610228.1 PFAM: NifZ family protein; KEGG: bvi:Bcep1808_5999 NifZ family protein YP_003610229.1 manually curated; TIGRFAM: nitrogen fixation protein FixT; KEGG: bph:Bphy_7777 nitrogen fixation protein FixT; PFAM: NifT/FixU family protein YP_003610230.1 manually curated; KEGG: bph:Bphy_7748 hypothetical protein YP_003610231.1 KEGG: bvi:Bcep1808_6005 DegT/DnrJ/EryC1/StrS aminotransferase; manually curated; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_003610232.1 PFAM: transposase IS4 family protein; KEGG: bch:Bcen2424_6302 transposase, IS4 family protein YP_003610233.1 KEGG: bpm:BURPS1710b_A0178 ISRSO5-transposase protein YP_003610234.1 KEGG: bph:Bphy_7430 integrase catalytic region YP_003610235.1 manually curated; TIGRFAM: regulatory protein, FmdB family; KEGG: bph:Bphy_7750 FmdB family regulatory protein; PFAM: regulatory protein FmdB YP_003610236.1 PFAM: ankyrin; KEGG: bph:Bphy_7751 ankyrin YP_003610237.1 KEGG: bph:Bphy_7807 hypothetical protein YP_003610238.1 TIGRFAM: nitrogenase iron protein; KEGG: bph:Bphy_7753 nitrogenase reductase; PFAM: NifH/frxC-family protein YP_003610239.1 KEGG: bph:Bphy_7754 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_003610240.1 TIGRFAM: nitrogenase molybdenum-iron protein beta chain; KEGG: bph:Bphy_7755 nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1 YP_003610241.1 PFAM: OmpW family protein; KEGG: bpy:Bphyt_2313 OmpW family protein YP_003610242.1 KEGG: bph:Bphy_3649 ubiquinol oxidase subunit II; TIGRFAM: ubiquinol oxidase subunit II; PFAM: COX aromatic rich domain protein; cytochrome C oxidase subunit II YP_003610243.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit I; KEGG: bpr:GBP346_A2895 cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome C oxidase subunit I YP_003610244.1 KEGG: bte:BTH_I1786 cytochrome C oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome C oxidase subunit III YP_003610245.1 KEGG: bpd:BURPS668_A2713 ubiquinol oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_003610246.1 KEGG: bph:Bphy_7698 hypothetical protein YP_003610248.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: bph:Bphy_7700 multi-sensor signal transduction histidine kinase; SMART: response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein YP_003610249.1 KEGG: bph:Bphy_6558 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003610250.1 KEGG: ttu:TERTU_0450 lipoprotein YP_003610251.1 manually curated; KEGG: bxe:Bxe_B1943 oxidoreductase, molybdopterin-binding subunit YP_003610252.1 PFAM: aldo/keto reductase; KEGG: ara:Arad_9006 oxidoreductase protein YP_003610253.1 PFAM: aminotransferase class I and II; KEGG: bpy:Bphyt_5434 aminotransferase class I and II YP_003610254.1 PFAM: protein of unknown function DUF201; KEGG: cja:CJA_3789 phosphoribosylglycinamide synthetase YP_003610255.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: saq:Sare_1048 NAD(P) transhydrogenase subunit alpha YP_003610256.1 PFAM: transposase IS4 family protein; KEGG: bmj:BMULJ_06235 ISBmu2 transposase YP_003610257.1 PFAM: IstB domain protein ATP-binding protein; KEGG: bvi:Bcep1808_4448 IstB ATP binding domain-containing protein YP_003610258.1 PFAM: Integrase catalytic region; KEGG: bcj:BCAS0653 transposase YP_003610259.1 PFAM: FAD dependent oxidoreductase; KEGG: mno:Mnod_8013 FAD dependent oxidoreductase YP_003610260.1 PFAM: Integrase catalytic region; KEGG: bph:Bphy_4961 integrase catalytic region YP_003610261.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_4962 transposase IS3/IS911 family protein YP_003610262.1 PFAM: general substrate transporter; KEGG: pfl:PFL_3682 citrate transporter YP_003610263.1 KEGG: oan:Oant_3087 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_003610264.1 PFAM: porin; KEGG: bgl:bglu_2g22280 porin, gram-negative type YP_003610265.1 PFAM: FAD dependent oxidoreductase; KEGG: bpt:Bpet2038 oxidoreductase YP_003610266.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpt:Bpet4885 MFS permease YP_003610267.1 KEGG: bxe:Bxe_A1381 monooxygenase YP_003610268.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_A1380 oxygenase YP_003610269.1 KEGG: sal:Sala_2416 LysR family transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_003610271.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: reu:Reut_A0821 hypothetical protein YP_003610272.1 manually curated; KEGG: bgl:bglu_1g25250 NAD-dependent aldehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_003610273.1 KEGG: bch:Bcen2424_1647 hypothetical protein; manually curated; PFAM: conserved hypothetical protein YP_003610274.1 PFAM: protein of unknown function DUF2186; KEGG: bam:Bamb_1549 hypothetical protein YP_003610276.1 KEGG: rpf:Rpic12D_5417 hypothetical protein YP_003610277.1 KEGG: rpf:Rpic12D_5419 type IV secretory pathway VirB3 family protein YP_003610278.1 KEGG: rpf:Rpic12D_5420 hypothetical protein YP_003610279.1 KEGG: psp:PSPPH_B0058 phage integrase family site specific recombinase; manually curated; PFAM: Integrase catalytic region YP_003610280.1 PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0019 transposase YP_003610281.1 KEGG: bxe:Bxe_C1276 outer membrane autotransporter barrel protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein YP_003610282.1 PFAM: lytic transglycosylase catalytic; KEGG: rpf:Rpic12D_5422 lytic transglycosylase catalytic YP_003610283.1 KEGG: bxe:Bxe_C0670 transposase YP_003610284.1 PFAM: Integrase catalytic region; KEGG: bph:Bphy_1084 integrase catalytic region YP_003610285.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: pmr:PMI2612 transposase YP_003610286.1 PFAM: transposase IS3/IS911 family protein; KEGG: lch:Lcho_4144 transposase IS3/IS911 family protein YP_003610287.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: bph:Bphy_7357 protein of unknown function DUF900 hydrolase family protein YP_003610289.1 KEGG: bph:Bphy_3927 two component transcriptional regulator YP_003610290.1 PFAM: cupin; KEGG: bgl:bglu_2g11760 hypothetical protein YP_003610291.1 PFAM: aminotransferase class V; KEGG: bgl:bglu_2g11770 aminotransferase class V YP_003610292.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_1763 major facilitator superfamily MFS_1 YP_003610293.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bmj:BMULJ_01595 hypothetical protein YP_003610294.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bmj:BMULJ_01596 LysR family transcriptional regulator YP_003610295.1 PFAM: porin; KEGG: bph:Bphy_3211 porin YP_003610296.1 KEGG: bvi:Bcep1808_5173 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_003610297.1 KEGG: bph:Bphy_0507 kynureninase; TIGRFAM: kynureninase; PFAM: aminotransferase class V YP_003610298.1 KEGG: bvi:Bcep1808_7535 hypothetical protein YP_003610299.1 SMART: Helix-turn-helix, AraC domain; KEGG: bgl:bglu_2g21200 transcriptional regulator YP_003610300.1 PFAM: oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bgl:bglu_2g21210 reductase component of anthranilate YP_003610301.1 TIGRFAM: anthranilate 1,2-dioxygenase, small subunit; KEGG: bgl:bglu_2g21220 subunit beta of terminal oxygenase component of anthranilate 1,2-dioxygenase; PFAM: aromatic-ring-hydroxylating dioxygenase subunit beta YP_003610302.1 KEGG: bgl:bglu_2g21230 anthranilate 1,2-dioxygenase, subunit alpha, TIGRFAM: anthranilate 1,2-dioxygenase, large subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Aromatic-ring-hydroxylating dioxygenase, subunit alpha-like YP_003610303.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: bxe:Bxe_C0488 transposase IS116/IS110/IS902 YP_003610304.1 PFAM: transposase IS3/IS911 family protein; KEGG: bph:Bphy_7355 integrase catalytic region YP_003610305.1 SMART: GAF domain protein; serine/threonine protein kinase; PAS domain containing protein; ATP-binding region ATPase domain protein; manually curated; TIGRFAM: PAS sensor protein; KEGG: bph:Bphy_7756 PAS sensor protein; PFAM: GAF domain protein; serine/threonine-protein kinase-like domain; PAS fold domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein YP_003610306.1 KEGG: eic:NT01EI_3515 hypothetical protein YP_003610307.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: bcj:BCAM0771 transposase YP_003610308.1 KEGG: bph:Bphy_7813 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: chorismate mutase, type II YP_003610309.1 KEGG: bxe:Bxe_C1332 transposase IS3/IS911 YP_003610311.1 KEGG: bph:Bphy_4858 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: ATPase AAA YP_003610312.1 PFAM: Integrase catalytic region; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_A3740 transposase YP_003610313.1 KEGG: bph:Bphy_7394 pectate lyase/Amb allergen; PFAM: pectate lyase; SMART: pectate lyase YP_003610314.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bxe:Bxe_A3520 transposase YP_003610315.1 KEGG: bxe:Bxe_A0825 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003610316.1 KEGG: bpy:Bphyt_3142 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_003610317.1 PFAM: inner-membrane translocator; KEGG: bmj:BMULJ_02461 branched-chain amino acid transporter permease YP_003610318.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0822 branched chain amino acid ABC transporter inner membrane protein YP_003610319.1 KEGG: cti:RALTA_A2504 branched amino acids ABC transporter periplasmic binding component YP_003610320.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: bph:Bphy_4956 transposase IS116/IS110/IS902 family protein YP_003610321.1 PFAM: transposase IS4 family protein; KEGG: bxe:Bxe_C0489 transposase IS4 YP_003610322.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bxe:Bxe_A3520 transposase YP_003610323.1 PFAM: ribosome-inactivating protein; KEGG: sdy:SDY_1389 Shiga toxin subunit A precursor YP_003610324.1 KEGG: hypothetical protein YP_003610325.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: bte:BTH_I1819 phosphopantetheinyltransferase family protein YP_003610326.1 KEGG: rbi:RB2501_07160 hypothetical protein YP_003610327.1 KEGG: bxe:Bxe_C0792 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_003610328.1 KEGG: bxe:Bxe_C0789 peptide/opine/nickel ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003610329.1 KEGG: FAP262; flagellar associated protein YP_003610330.1 KEGG: bpy:Bphyt_6584 RNA polymerase, sigma 70 subunit, RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_003610331.1 KEGG: bpy:Bphyt_1149 hypothetical protein YP_003610332.1 KEGG: bph:Bphy_4271 porin YP_003610333.1 KEGG: gbm:Gbem_1615 asparagine synthase (glutamine-hydrolyzing) YP_003610334.1 KEGG: ddc:Dd586_2235 hypothetical protein YP_003610335.1 TIGRFAM: 1-aminocyclopropane-1-carboxylate deaminase; KEGG: bph:Bphy_5405 1-aminocyclopropane-1-carboxylate deaminase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003610336.1 KEGG: bpd:BURPS668_A1700 StAR YP_003610337.1 KEGG: bph:Bphy_3661 hypothetical protein YP_003610338.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: bph:Bphy_7355 integrase catalytic region YP_003610339.1 KEGG: rde:RD1_0132 photosynthetic complex assembly protein YP_003610340.1 KEGG: eca:ECA2897 hypothetical protein YP_003610341.1 KEGG: GH12065 gene product from transcript GH12065-RA YP_003610342.1 KEGG: bvi:Bcep1808_2629 transposase IS3/IS911 family protein; manually curated; PFAM: transposase IS3/IS911 family protein YP_003610343.1 PFAM: IS66 Orf2 family protein; KEGG: bvi:Bcep1808_7005 IS66 Orf2 family protein YP_003610344.1 PFAM: transposase IS66; KEGG: bph:Bphy_4919 transposase IS66 YP_003610345.1 PFAM: transposase IS4 family protein; KEGG: bph:Bphy_4916 transposase IS4 family protein YP_003610346.1 KEGG: sme:SMa1757 short chain; manually curated; PFAM: short-chain dehydrogenase/reductase SDR YP_003610348.1 KEGG: bph:Bphy_7681 hypothetical protein YP_003610349.1 KEGG: bph:Bphy_7682 hypothetical protein YP_003610350.1 KEGG: reu:Reut_C5936 IS4 family transposase YP_003610351.1 PFAM: amidohydrolase; KEGG: bam:Bamb_4804 amidohydrolase YP_003610352.1 KEGG: bcm:Bcenmc03_4806 major facilitator transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_003610353.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bcj:BCAM2660 CoA transferase family YP_003610354.1 PFAM: pyruvate carboxyltransferase; KEGG: bcm:Bcenmc03_4804 pyruvate carboxyltransferase YP_003610355.1 KEGG: bac:BamMC406_5349 IclR family transcriptional regulator; PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR YP_003610356.1 KEGG: ret:RHE_CH01011 hypothetical protein YP_003610357.1 KEGG: spl:Spea_3453 hypothetical protein YP_003610358.1 PFAM: transposase IS4 family protein; KEGG: reu:Reut_C5936 IS4 family transposase YP_003610359.1 KEGG: apt:APA01_05860 hypothetical protein YP_003610360.1 KEGG: bcj:BCAM2640A hypothetical protein YP_003610362.1 KEGG: SIS domain containing protein YP_003610363.1 KEGG: rbi:RB2501_10317 hypothetical protein YP_003610364.1 KEGG: ami:Amir_5368 hypothetical protein YP_003610365.1 PFAM: protein of unknown function DUF847; peptidoglycan binding domain; KEGG: bxe:Bxe_B0491 hypothetical protein YP_003610366.1 KEGG: bpy:Bphyt_4029 hypothetical protein YP_003610367.1 KEGG: bph:Bphy_6937 hypothetical protein YP_003610368.1 KEGG: bcv:Bcav_2140 C-5 cytosine-specific DNA methylase YP_003610369.1 KEGG: cbk:CLL_A2106 DNA-bindng response regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; SMART: Helix-turn-helix, AraC domain YP_003610370.1 KEGG: bpy:Bphyt_4848 hypothetical protein YP_003610371.1 KEGG: bpy:Bphyt_3691 hypothetical protein YP_003610372.1 KEGG: mes:Meso_0341 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_003610373.1 PFAM: glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: mxa:MXAN_0996 tryptophan halogenase YP_003610374.1 KEGG: cyh:Cyan8802_3478 hypothetical protein YP_003610375.1 KEGG: rci:RCIX577 hypothetical protein YP_003610376.1 KEGG: gur:Gura_0052 extracellular solute-binding protein YP_003610377.1 KEGG: xau:Xaut_0992 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_003610378.1 PFAM: integrase; integrase domain protein SAM domain protein; KEGG: bvi:Bcep1808_6795 phage integrase YP_003610379.1 PFAM: protein of unknown function DUF1488; KEGG: bph:Bphy_7325 hypothetical protein YP_003610380.1 KEGG: bph:Bphy_7591 nuclear protein SET; PFAM: nuclear protein SET; SMART: nuclear protein SET YP_003610381.1 KEGG: vap:Vapar_3650 hypothetical protein YP_003610382.1 KEGG: reu:Reut_B5752 hypothetical protein YP_003610383.1 PFAM: protein of unknown function DUF1488; KEGG: reu:Reut_B5753 hypothetical protein YP_003610384.1 KEGG: bxe:Bxe_B1734 hypothetical protein YP_003610385.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: bpy:Bphyt_6742 PAS/PAC sensor protein; SMART: PAS domain containing protein YP_003610386.1 KEGG: bpy:Bphyt_6741 formyl-coenzyme A transferase; TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_003610387.1 KEGG: bpy:Bphyt_6740 oxalyl-CoA decarboxylase; TIGRFAM: oxalyl-CoA decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding YP_003610388.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2758 major facilitator superfamily (MFS) oxalate/formate antiporter YP_003610389.1 KEGG: bpy:Bphyt_6738 hypothetical protein YP_003610390.1 PFAM: integrase; KEGG: bxe:Bxe_C0811 phage integrase YP_003610391.1 KEGG: bph:Bphy_0422 hypothetical protein YP_003610392.1 KEGG: dac:Daci_4742 phasin family protein YP_003610393.1 KEGG: bxe:Bxe_A2940 hypothetical protein YP_003610394.1 KEGG: bph:Bphy_6782 hypothetical protein YP_003610395.1 KEGG: bvi:Bcep1808_6717 hypothetical protein YP_003610396.1 KEGG: bph:Bphy_3661 hypothetical protein YP_003610397.1 KEGG: hypothetical protein YP_003610398.1 KEGG: bra:BRADO7010 sensor histidine kinase YP_003610399.1 KEGG: hypothetical protein YP_003610400.1 KEGG: xac:XAC1135 hypothetical protein YP_003610402.1 KEGG: pag:PLES_35461 nitrate transporter YP_003610403.1 KEGG: eli:ELI_14190 hypothetical protein YP_003610404.1 KEGG: nam:NAMH_0317 H+-transporting two-sector ATPase, B/B' subunit YP_003610405.1 KEGG: ecx:EcHS_A0922 hypothetical protein YP_003610406.1 KEGG: ppr:PBPRB1678 periplasmic linker protein YP_003610407.1 KEGG: vap:Vapar_5859 hypothetical protein YP_003610408.1 KEGG: pph:Ppha_2321 sulfite reductase, dissimilatory-type subunit alpha YP_003610409.1 KEGG: hypothetical protein LOC100273932 YP_003610410.1 KEGG: Os01g0278600; hypothetical protein YP_003610411.1 KEGG: cyt:cce_5238 ATPase; PFAM: SMC domain protein; SMART: ATPase AAA YP_003610412.1 KEGG: bmj:BMULJ_01258 hypothetical protein YP_003610413.1 PFAM: protein of unknown function DUF2513; KEGG: bac:BamMC406_6729 hypothetical protein YP_003610414.1 KEGG: bac:BamMC406_6716 hypothetical protein YP_003610415.1 KEGG: hna:Hneap_1660 hypothetical protein YP_003610416.1 KEGG: pol:Bpro_5378 hypothetical protein YP_003610417.1 KEGG: cyh:Cyan8802_2274 protein of unknown function DUF559 YP_003610418.1 KEGG: xca:xccb100_3118 hypothetical protein YP_003610419.1 PFAM: PemK family protein; KEGG: bgl:bglu_1p0470 MazF family transcriptional regulator2 YP_003610420.1 PFAM: SpoVT/AbrB domain protein; KEGG: bgl:bglu_1p0480 MazE family transcriptional regulator2 YP_003610421.1 PFAM: integrase; KEGG: bgl:bglu_1p0490 site-specific recombinase YP_003610422.1 KEGG: bac:BamMC406_6780 hypothetical protein YP_003610423.1 KEGG: bxe:Bxe_A2419 hypothetical protein YP_003610424.1 PFAM: methyltransferase type 11; KEGG: rhi:NGR_b02960 probable methyltransferase YP_003610425.1 PFAM: protein of unknown function DUF2282, transmembrane; KEGG: cvi:CV_3512 signal peptide protein YP_003610426.1 PFAM: protein of unknown function DUF2063; KEGG: bgl:bglu_2p0960 hypothetical protein YP_003610427.1 PFAM: copper resistance protein CopC; KEGG: bpy:Bphyt_2173 copper resistance protein CopC YP_003610428.1 KEGG: bpy:Bphyt_2174 hypothetical protein YP_003610429.1 KEGG: bpy:Bphyt_2175 hypothetical protein YP_003610430.1 PFAM: electron transporter SCO1/SenC; KEGG: app:CAP2UW1_1797 electron transporter SCO1/SenC YP_003610431.1 PFAM: redoxin; KEGG: pol:Bpro_3502 hypothetical protein YP_003610432.1 PFAM: cytochrome C class I; KEGG: rpf:Rpic12D_5367 cytochrome C class I YP_003610433.1 PFAM: redoxin; KEGG: bgl:bglu_1g31920 hypothetical protein YP_003610434.1 PFAM: iron-sulfur protein; KEGG: bvi:Bcep1808_7260 high potential iron-sulfur protein YP_003610435.1 KEGG: pol:Bpro_3504 multicopper oxidase type 3; PFAM: multicopper oxidase type 3; multicopper oxidase type 2 YP_003610436.1 PFAM: nitrogen regulatory protein P-II; KEGG: bmj:BMULJ_05827 nitrogen regulatory protein P-II YP_003610437.1 KEGG: bmj:BMULJ_06286 hypothetical protein YP_003610438.1 KEGG: bmj:BMULJ_06285 hypothetical protein YP_003610439.1 KEGG: bmj:BMULJ_06283 hypothetical protein YP_003610440.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: bmj:BMULJ_06282 thiol:disulfide interchange protein YP_003610441.1 KEGG: bmj:BMULJ_06281 hypothetical protein YP_003610442.1 KEGG: bmj:BMULJ_06280 copper efflux system membrane protein; TIGRFAM: heavy metal efflux pump; PFAM: acriflavin resistance protein YP_003610443.1 KEGG: bmj:BMULJ_05824 copper efflux system membrane protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein YP_003610444.1 PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_7174 outer membrane efflux protein YP_003610445.1 KEGG: bmj:BMULJ_06277 hypothetical protein YP_003610446.1 PFAM: electron transporter SCO1/SenC; KEGG: rme:Rmet_4695 electron transporter SCO1/SenC YP_003610447.1 PFAM: transposase IS4 family protein; KEGG: reu:Reut_C5936 IS4 family transposase YP_003610448.1 KEGG: hypothetical protein YP_003610449.1 KEGG: hypothetical protein YP_003610450.1 KEGG: hypothetical protein YP_003610451.1 KEGG: bac:BamMC406_6784 hypothetical protein YP_003610452.1 KEGG: bac:BamMC406_6786 ATPase YP_003610453.1 KEGG: bvi:Bcep1808_7130 hypothetical protein YP_003610454.1 KEGG: bac:BamMC406_6788 DNA repair exonuclease-like protein YP_003610455.1 KEGG: bac:BamMC406_6790 hypothetical protein YP_003610456.1 KEGG: bac:BamMC406_6791 hypothetical protein YP_003610457.1 KEGG: bac:BamMC406_6792 hypothetical protein YP_003610458.1 KEGG: bac:BamMC406_6793 hypothetical protein YP_003610459.1 PFAM: protein of unknown function DUF583; KEGG: bvi:Bcep1808_7123 hypothetical protein YP_003610460.1 KEGG: bpy:Bphyt_7408 hypothetical protein YP_003610461.1 KEGG: tmz:Tmz1t_1129 hypothetical protein YP_003610462.1 PFAM: UvrD/REP helicase; KEGG: bac:BamMC406_6795 UvrD/REP helicase YP_003610463.1 KEGG: bac:BamMC406_6796 hypothetical protein YP_003610464.1 KEGG: maq:Maqu_0581 RND family efflux transporter MFP subunit YP_003610465.1 KEGG: bvi:Bcep1808_7120 hypothetical protein YP_003610466.1 KEGG: bac:BamMC406_6799 hypothetical protein YP_003610467.1 KEGG: bac:BamMC406_6800 hypothetical protein YP_003610468.1 KEGG: bac:BamMC406_6502 hypothetical protein YP_003610469.1 KEGG: bac:BamMC406_6503 hypothetical protein YP_003610470.1 KEGG: bac:BamMC406_6504 hypothetical protein YP_003610471.1 PFAM: type IV secretion system family protein; KEGG: bac:BamMC406_6505 hypothetical protein YP_003610472.1 KEGG: bac:BamMC406_6506 type IV secretory pathway VirB4 components-like protein YP_003610473.1 KEGG: bac:BamMC406_6507 hypothetical protein YP_003610474.1 KEGG: bmj:BMULJ_05897 type IV secretion system protein YP_003610475.1 PFAM: type II secretion system protein E; Proteasome/cyclosome regulatory subunit; KEGG: bac:BamMC406_6509 type II secretion system protein E YP_003610476.1 manually curated; KEGG: bph:Bphy_7514 hypothetical protein YP_003610477.1 KEGG: bxe:Bxe_B2777 hypothetical protein YP_003610478.1 KEGG: hypothetical LOC424399 YP_003610479.1 PFAM: protein of unknown function DUF2201, metallopeptidase-related; KEGG: bmj:BMULJ_05899 hypothetical protein YP_003610480.1 KEGG: bac:BamMC406_6511 hypothetical protein YP_003610481.1 KEGG: bac:BamMC406_6512 ATPase YP_003610482.1 KEGG: bmj:BMULJ_05902 hypothetical protein YP_003610483.1 KEGG: bvi:Bcep1808_7106 hypothetical protein YP_003610484.1 KEGG: bac:BamMC406_6515 hypothetical protein YP_003610485.1 KEGG: bac:BamMC406_6516 hypothetical protein YP_003610487.1 KEGG: bac:BamMC406_6518 hypothetical protein YP_003610488.1 KEGG: bvi:Bcep1808_7102 hypothetical protein YP_003610489.1 KEGG: bac:BamMC406_6520 outer membrane lipoprotein transmembrane YP_003610490.1 KEGG: CYP71A25; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding YP_003610491.1 KEGG: pto:PTO1003 succinyl-CoA synthetase subunit beta YP_003610492.1 KEGG: fre:Franean1_1119 diguanylate cyclase/phosphodiesterase YP_003610493.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bvi:Bcep1808_7099 UBA/ThiF-type NAD/FAD binding protein YP_003610494.1 PFAM: hypothetical protein; KEGG: reh:PHG307 hypothetical protein YP_003610495.1 KEGG: bvi:Bcep1808_7097 hypothetical protein YP_003610496.1 KEGG: bmj:BMULJ_05912 hypothetical protein YP_003610497.1 KEGG: bmj:BMULJ_05913 carbamoylphosphate synthase large subunit YP_003610498.1 KEGG: bac:BamMC406_6528 hypothetical protein YP_003610499.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: hypothetical protein; SMART: ParB domain protein nuclease YP_003610500.1 KEGG: reh:PHG313 hypothetical protein YP_003610501.1 KEGG: reh:PHG314 helicase superfamily protein II; PFAM: helicase; SMART: helicase YP_003610502.1 KEGG: reh:PHG316 hypothetical protein YP_003610503.1 KEGG: rfr:Rfer_4304 hypothetical protein YP_003610504.1 KEGG: hypothetical protein YP_003610505.1 KEGG: bac:BamMC406_5337 NAD-dependent epimerase/dehydratase YP_003610506.1 PFAM: protein of unknown function DUF1173; KEGG: bvi:Bcep1808_7090 hypothetical protein YP_003610507.1 SMART: phospholipase D/transphosphatidylase; KEGG: xcv:XCVc0026 endonuclease YP_003610508.1 KEGG: hypothetical protein YP_003610509.1 KEGG: bac:BamMC406_6535 hypothetical protein YP_003610510.1 PFAM: Gp37Gp68 family protein; KEGG: aav:Aave_1672 phage Gp37Gp68 family protein YP_003610511.1 KEGG: hypothetical protein YP_003610512.1 KEGG: ftn:FTN_1357 ATP-dependent exoDNAse (exonuclease V) subunit beta YP_003610513.1 KEGG: bmj:BMULJ_05921 tyrosine recombinase YP_003610514.1 KEGG: hypothetical protein LOC742906