-- dump date 20140619_012519 -- class Genbank::CDS -- table cds_note -- id note YP_004226531.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: bgf:BC1003_0001 chromosomal replication initiator protein DnaA; SMART: Chromosomal replication initiator DnaA domain; ATPase AAA YP_004226532.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: bgf:BC1003_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain YP_004226533.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: bgf:BC1003_0003 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein YP_004226534.1 KEGG: rsl:RPSI07_0197 phage-related protein, protein CII YP_004226535.1 KEGG: swd:Swoo_0900 hypothetical protein YP_004226536.1 KEGG: rsl:RPSI07_0196 protein beta YP_004226537.1 KEGG: mpt:Mpe_A1939 hypothetical protein YP_004226538.1 KEGG: tva:TVAG_415400 hypothetical protein YP_004226539.1 KEGG: vfm:VFMJ11_1437 hypothetical protein YP_004226540.1 PFAM: protein of unknown function DUF218; KEGG: bac:BamMC406_4882 hypothetical protein YP_004226541.1 KEGG: bpd:BURPS668_A3239 hypothetical protein YP_004226542.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: pst:PSPTO_4634 N-acetylmuramoyl-L-alanine amidase YP_004226543.1 manually curated; KEGG: reu:Reut_A0552 hypothetical protein YP_004226544.1 KEGG: bvi:Bcep1808_0451 rhs element Vgr protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Protein of unknown function DUF2345 YP_004226545.1 KEGG: ent:Ent638_0180 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004226546.1 KEGG: bmu:Bmul_2917 hypothetical protein YP_004226547.1 manually curated; KEGG: rcu:RCOM_1896940 hypothetical protein YP_004226548.1 KEGG: bgf:BC1003_0056 hypothetical protein YP_004226549.1 KEGG: bgf:BC1003_0057 hypothetical protein YP_004226550.1 KEGG: bgf:BC1003_0058 hypothetical protein YP_004226551.1 KEGG: bpy:Bphyt_0019 transcriptional regulator, AraC family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: transcription activator effector binding; Helix-turn-helix, AraC domain YP_004226552.1 KEGG: bgf:BC1003_0053 ethanolamine transporter; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region YP_004226553.1 KEGG: bpy:Bphyt_0021 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit YP_004226554.1 KEGG: bgf:BC1003_0051 ethanolamine ammonia-lyase; PFAM: Ethanolamine ammonia-lyase light chain YP_004226555.1 PFAM: protein of unknown function DUF779; KEGG: bgf:BC1003_0050 hypothetical protein YP_004226556.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_0049 aldehyde dehydrogenase YP_004226557.1 KEGG: bgf:BC1003_0048 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004226558.1 KEGG: bgf:BC1003_0047 heavy metal translocating P-type ATPase; TIGRFAM: cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004226559.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: bgf:BC1003_0046 MerR family transcriptional regulator; SMART: regulatory protein MerR YP_004226560.1 KEGG: bgf:BC1003_0045 hypothetical protein YP_004226561.1 KEGG: bgf:BC1003_0044 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004226562.1 PFAM: aminotransferase class I and II; KEGG: bgf:BC1003_0043 class I/II aminotransferase YP_004226563.1 KEGG: bgf:BC1003_0042 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004226564.1 KEGG: bgf:BC1003_0039 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004226565.1 KEGG: bgf:BC1003_0038 peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_004226566.1 KEGG: bgf:BC1003_0037 2OG-Fe(II) oxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit YP_004226567.1 KEGG: bgf:BC1003_0036 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004226568.1 PFAM: thioesterase superfamily protein; KEGG: bgf:BC1003_0062 thioesterase superfamily protein YP_004226569.1 PFAM: Patatin; KEGG: bgf:BC1003_0063 patatin YP_004226570.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bgf:BC1003_0064 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004226571.1 KEGG: bgf:BC1003_0065 phosphoenolpyruvate carboxykinase (GTP); PFAM: phosphoenolpyruvate carboxykinase (GTP) YP_004226572.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0066 LysR family transcriptional regulator YP_004226573.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; KEGG: bgf:BC1003_0067 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein YP_004226574.1 PFAM: thioredoxin; KEGG: bgf:BC1003_0068 thioredoxin YP_004226575.1 KEGG: bgf:BC1003_0069 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_004226576.1 KEGG: bgf:BC1003_0070 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_004226577.1 KEGG: bgf:BC1003_0071 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_004226578.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_0072 lysine exporter protein LysE/YggA YP_004226579.1 PFAM: peptidase M48; KEGG: bgf:BC1003_0073 peptidase M48 YP_004226580.1 KEGG: bgf:BC1003_0074 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein YP_004226581.1 KEGG: bxe:Bxe_A4411 hypothetical protein YP_004226582.1 KEGG: bgf:BC1003_0076 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; histidine kinase A domain protein YP_004226583.1 KEGG: bgf:BC1003_0077 fis family two component transcriptional regulator; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver YP_004226584.1 KEGG: bgf:BC1003_0078 ExsB protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_004226585.1 PFAM: Radical SAM domain protein; KEGG: bgf:BC1003_0079 radical SAM protein YP_004226586.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bgf:BC1003_0080 6-pyruvoyl tetrahydropterin synthase and hypothetical protein YP_004226587.1 KEGG: bgf:BC1003_0082 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase YP_004226588.1 KEGG: bgf:BC1003_0083 Sel1 domain-containing protein repeat-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_004226589.1 KEGG: bpy:Bphyt_0322 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_004226590.1 TIGRFAM: penicillin-binding protein 2; KEGG: bgf:BC1003_0085 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004226591.1 KEGG: bgf:BC1003_0086 rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD YP_004226592.1 KEGG: bgf:BC1003_0087 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_004226593.1 KEGG: bgf:BC1003_0088 cell shape determining protein, MreB/Mrl family; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_004226594.1 KEGG: bgf:BC1003_0089 glutamyl-tRNA(Gln) amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit YP_004226595.1 KEGG: bgf:BC1003_0090 glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase YP_004226596.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; KEGG: bgf:BC1003_0091 glutamyl-tRNA(Gln) amidotransferase subunit B; SMART: Asn/Gln amidotransferase YP_004226597.1 PFAM: protein of unknown function DUF344; KEGG: bgf:BC1003_0092 hypothetical protein YP_004226598.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: bgf:BC1003_0093 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase YP_004226599.1 PFAM: peptidase M48; KEGG: bgf:BC1003_0094 peptidase M48 YP_004226600.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0095 major facilitator superfamily protein YP_004226601.1 KEGG: bgf:BC1003_0096 methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; PFAM: methionine biosynthesis MetW protein YP_004226602.1 TIGRFAM: homoserine O-acetyltransferase; KEGG: bgf:BC1003_0097 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_004226603.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_0098 regulatory protein TetR YP_004226604.1 KEGG: bgf:BC1003_0099 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004226605.1 TIGRFAM: acetylglutamate kinase; KEGG: bgf:BC1003_0100 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004226606.1 KEGG: bgf:BC1003_0102 tetratricopeptide repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004226607.1 KEGG: bgf:BC1003_0103 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004226608.1 KEGG: bgf:BC1003_0104 fis family two component transcriptional regulator; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver YP_004226609.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; ATPase AAA central domain protein; Clp ATPase-like; KEGG: bgf:BC1003_0105 heat shock protein HslVU, ATPase subunit HslU; SMART: ATPase AAA YP_004226610.1 PFAM: 20S proteasome A and B subunits; KEGG: bgf:BC1003_0106 20S proteasome A and subunit Bs YP_004226611.1 TIGRFAM: RNA polymerase-binding protein DksA; KEGG: bxe:Bxe_A4379 TraR/DksA family transcriptional regulator YP_004226612.1 KEGG: bgf:BC1003_0109 cobalamin synthesis protein P47K; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SMART: cobalamin synthesis CobW domain protein YP_004226613.1 SMART: PUA domain containing protein; KEGG: bgf:BC1003_0110 hypothetical protein YP_004226614.1 KEGG: bgf:BC1003_0111 tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004226615.1 PFAM: protein of unknown function DUF484; KEGG: bgf:BC1003_0112 hypothetical protein YP_004226616.1 KEGG: bgf:BC1003_0113 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_004226617.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: bgf:BC1003_0114 lipid A biosynthesis acyltransferase YP_004226618.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: bgf:BC1003_0115 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_004226619.1 KEGG: bgf:BC1003_0116 hypothetical protein YP_004226620.1 PFAM: phytanoyl-CoA dioxygenase; KEGG: bgf:BC1003_0117 phytanoyl-CoA dioxygenase YP_004226621.1 PFAM: Protein of unknown function DUF3185; KEGG: bgf:BC1003_0118 hypothetical protein YP_004226622.1 PFAM: aldo/keto reductase; KEGG: bgf:BC1003_0119 aldo/keto reductase YP_004226623.1 KEGG: bxe:Bxe_A4366 hypothetical protein YP_004226624.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0121 major facilitator superfamily protein YP_004226625.1 KEGG: bgf:BC1003_0122 hypothetical protein YP_004226626.1 PFAM: aminoglycoside phosphotransferase; KEGG: bgf:BC1003_0123 aminoglycoside phosphotransferase YP_004226627.1 KEGG: bgf:BC1003_0124 hypothetical protein YP_004226628.1 PFAM: protein of unknown function DUF182; KEGG: bpy:Bphyt_0364 protein of unknown function DUF182 YP_004226629.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bgf:BC1003_0126 carbon monoxide dehydrogenase subunit G YP_004226630.1 KEGG: bgf:BC1003_0127 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A YP_004226631.1 KEGG: bgf:BC1003_0128 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_004226632.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bgf:BC1003_0129 molybdopterin dehydrogenase FAD-binding protein YP_004226633.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bgf:BC1003_0130 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein YP_004226634.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: bgf:BC1003_0131 (2Fe-2S)-binding domain-containing protein YP_004226635.1 PFAM: amino acid permease-associated region; KEGG: bxe:Bxe_A4348 basic amino acid transporter YP_004226636.1 KEGG: bgf:BC1003_0136 LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004226637.1 KEGG: bgf:BC1003_0137 signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004226638.1 KEGG: bgf:BC1003_0138 ferredoxin--NADP(+) reductase; PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein YP_004226639.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bgf:BC1003_0139 endonuclease/exonuclease/phosphatase YP_004226640.1 KEGG: bgf:BC1003_0140 hypothetical protein YP_004226641.1 KEGG: bgf:BC1003_0141 ATPase AAA; PFAM: ATPase AAA central domain protein; SMART: ATPase AAA YP_004226642.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_0142 FAD dependent oxidoreductase YP_004226643.1 PFAM: High potential iron-sulfur protein; KEGG: bgf:BC1003_0143 high potential iron-sulfur protein YP_004226644.1 PFAM: Amidase; KEGG: bgf:BC1003_0145 amidase YP_004226645.1 KEGG: bgf:BC1003_0146 carboxymethylenebutenolidase YP_004226646.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bgf:BC1003_0147 2-nitropropane dioxygenase NPD YP_004226647.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_0148 extracellular ligand-binding receptor YP_004226648.1 KEGG: bpy:Bphyt_0395 hemagglutinin-related transmembrane protein YP_004226649.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0149 major facilitator superfamily protein YP_004226650.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bgf:BC1003_0150 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004226651.1 KEGG: bgf:BC1003_0151 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004226652.1 KEGG: bgf:BC1003_0152 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004226653.1 KEGG: bgf:BC1003_0153 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004226654.1 KEGG: bgf:BC1003_0154 hypothetical protein YP_004226655.1 SMART: beta-lactamase domain protein; KEGG: bgf:BC1003_0155 beta-lactamase domain-containing protein YP_004226656.1 KEGG: bgf:BC1003_0156 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A YP_004226657.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bgf:BC1003_0157 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_004226658.1 KEGG: bgf:BC1003_0158 hypothetical protein; manually curated; PFAM: Uncharacterised protein family UPF0102 YP_004226659.1 KEGG: bgf:BC1003_0159 phosphoheptose isomerase; TIGRFAM: phosphoheptose isomerase; PFAM: sugar isomerase (SIS) YP_004226660.1 KEGG: bgf:BC1003_0160 transport-associated protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004226661.1 PFAM: cytochrome c class I; KEGG: bgf:BC1003_0161 cytochrome c class I YP_004226662.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bgf:BC1003_0163 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004226663.1 PFAM: Protein of unknown function DUF2239; KEGG: bgf:BC1003_0164 hypothetical protein YP_004226664.1 KEGG: bgf:BC1003_0165 uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004226665.1 KEGG: bgf:BC1003_0166 Na+/H+ antiporter; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger YP_004226666.1 KEGG: bgf:BC1003_0167 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_004226667.1 PFAM: CutC family protein; KEGG: bgf:BC1003_0168 CutC family protein YP_004226668.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: bgf:BC1003_0169 pyruvate/ketoisovalerate oxidoreductase, catalytic domain-containing protein YP_004226669.1 PFAM: K channel inward rectifier conserved region 2 domain protein; KEGG: bgf:BC1003_0170 ion transport 2 domain-containing protein YP_004226670.1 KEGG: bpy:Bphyt_0421 hypothetical protein YP_004226671.1 KEGG: bgf:BC1003_0172 hypothetical protein YP_004226672.1 PFAM: PfkB domain protein; KEGG: bgf:BC1003_0173 PfkB domain-containing protein YP_004226673.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bgf:BC1003_0174 N-acylglucosamine 2-epimerase YP_004226674.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; KEGG: bgf:BC1003_0175 LacI family transcriptional regulator YP_004226675.1 KEGG: bgf:BC1003_0176 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein YP_004226676.1 PFAM: Bile acid:sodium symporter; KEGG: bgf:BC1003_0177 bile acid:sodium symporter YP_004226677.1 KEGG: bgf:BC1003_0178 hypothetical protein YP_004226678.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_0179 porin gram-negative type YP_004226679.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0180 LysR family transcriptional regulator YP_004226680.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: bgf:BC1003_0181 methylmalonyl-CoA mutase large subunit; PFAM: methylmalonyl-CoA mutase; ArgK protein; cobalamin B12-binding domain protein YP_004226681.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bxe:Bxe_A4276 2-nitropropane dioxygenase YP_004226682.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_0183 alpha/beta hydrolase fold protein YP_004226683.1 KEGG: bgf:BC1003_0184 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004226684.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_0185 hypothetical protein YP_004226685.1 SMART: beta-lactamase domain protein; KEGG: bgf:BC1003_0186 metallo-beta-lactamase superfamily protein YP_004226686.1 PFAM: MaoC domain protein dehydratase; KEGG: bgf:BC1003_0187 MaoC domain-containing protein dehydratase YP_004226687.1 PFAM: protein of unknown function DUF1289; KEGG: bgf:BC1003_0188 hypothetical protein YP_004226688.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bgf:BC1003_0189 YbaK/prolyl-tRNA synthetase associated region YP_004226689.1 PFAM: pyruvate carboxyltransferase; KEGG: bxe:Bxe_A4270 hydroxymethylglutaryl-CoA lyase YP_004226690.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bgf:BC1003_0191 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004226691.1 PFAM: protein of unknown function DUF1234; KEGG: bgf:BC1003_0192 hypothetical protein YP_004226692.1 KEGG: bgf:BC1003_0193 sulfate ABC transporter periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004226693.1 SMART: biotin and thiamin synthesis associated; Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: bgf:BC1003_0194 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_004226694.1 TIGRFAM: dethiobiotin synthase; KEGG: bgf:BC1003_0195 dethiobiotin synthase YP_004226695.1 TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: bgf:BC1003_0196 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_004226696.1 KEGG: bgf:BC1003_0197 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_004226697.1 PFAM: ImpA domain protein; KEGG: bxe:Bxe_A2098 cytoplasmic protein YP_004226698.1 KEGG: bpd:BURPS668_A0340 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_004226699.1 KEGG: bpd:BURPS668_A0339 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_004226700.1 KEGG: bmj:BMULJ_04597 hypothetical protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein YP_004226701.1 PFAM: virulence protein SciE type; KEGG: bpy:Bphyt_0944 virulence protein SciE type YP_004226702.1 KEGG: bmn:BMA10247_A2180 hypothetical protein YP_004226703.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; ATPase AAA central domain protein; Clp ATPase-like; KEGG: bxe:Bxe_A2096 ClpA/B-type chaperone, ATPase subunit ClpB, heat shock protein; SMART: ATPase AAA YP_004226704.1 KEGG: bph:Bphy_6114 type VI secretion protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301 YP_004226705.1 KEGG: bph:Bphy_6113 EvpB family type VI secretion protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_004226706.1 KEGG: bpd:BURPS668_A0331 SciM protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004226707.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: bxe:Bxe_A2090 outer membrane lipoprotein YP_004226708.1 KEGG: bpd:BURPS668_A0329 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_004226709.1 KEGG: bxe:Bxe_A2088 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: Type IV / VI secretion system, DotU; OmpA/MotB domain protein YP_004226710.1 KEGG: bxe:Bxe_A2085 membrane protein, SciS/IcmF-like; TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215 YP_004226711.1 KEGG: hit:NTHI0111 hypothetical protein YP_004226712.1 KEGG: bgf:BC1003_0198 hypothetical protein YP_004226713.1 KEGG: bgf:BC1003_0199 hypothetical protein YP_004226714.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpy:Bphyt_0459 acyl-CoA dehydrogenase domain protein YP_004226715.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_0201 short-chain dehydrogenase/reductase SDR YP_004226716.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bgf:BC1003_0202 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004226717.1 KEGG: bgf:BC1003_0203 carbonate dehydratase; PFAM: carbonic anhydrase YP_004226718.1 KEGG: bgf:BC1003_0204 (isocitrate dehydrogenase (NADP(+))) kinase; PFAM: Isocitrate dehydrogenase kinasephosphatase YP_004226719.1 KEGG: bgf:BC1003_0205 MerR family transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_004226720.1 SMART: beta-lactamase domain protein; KEGG: bgf:BC1003_0206 metallo-beta-lactamase superfamily protein YP_004226721.1 PFAM: extracellular solute-binding protein family 5; KEGG: bpy:Bphyt_0468 extracellular solute-binding protein family 5 YP_004226722.1 PFAM: periplasmic binding protein; KEGG: bgf:BC1003_0208 periplasmic-binding protein YP_004226723.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_0209 short-chain dehydrogenase/reductase SDR YP_004226724.1 PFAM: DSBA oxidoreductase; KEGG: bgf:BC1003_0210 DsbA oxidoreductase YP_004226725.1 PFAM: Sporulation domain-containing protein; KEGG: bgf:BC1003_0211 sporulation domain-containing protein YP_004226726.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: bgf:BC1003_0212 arginyl-tRNA synthetase YP_004226727.1 PFAM: Domain of unknown function DUF1840; KEGG: bgf:BC1003_0213 hypothetical protein YP_004226728.1 KEGG: bgf:BC1003_0214 acid shock protein YP_004226729.1 TIGRFAM: methionine synthase; KEGG: bgf:BC1003_0215 methionine synthase; PFAM: Vitamin B12 dependent methionine synthase activation region; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; dihydropteroate synthase DHPS YP_004226730.1 PFAM: homocysteine S-methyltransferase; KEGG: bgf:BC1003_0216 homocysteine S-methyltransferase YP_004226731.1 PFAM: Protein of unknown function DUF3567; KEGG: bgf:BC1003_0217 hypothetical protein YP_004226732.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_0218 alpha/beta hydrolase fold protein YP_004226733.1 PFAM: Protein of unknown function DUF3108; KEGG: bgf:BC1003_0219 hypothetical protein YP_004226734.1 KEGG: bgf:BC1003_0220 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004226735.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bgf:BC1003_0221 fumarylacetoacetate (FAA) hydrolase YP_004226736.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_0222 extracellular ligand-binding receptor YP_004226737.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_0223 enoyl-CoA hydratase/isomerase YP_004226738.1 KEGG: bgf:BC1003_0224 hypothetical protein YP_004226739.1 KEGG: bpy:Bphyt_0486 hypothetical protein YP_004226740.1 KEGG: bgf:BC1003_0226 RfaE bifunctional protein; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_004226741.1 KEGG: bgf:BC1003_0227 hypothetical protein YP_004226742.1 KEGG: bgf:BC1003_0228 transcriptional activator, Baf family; TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor YP_004226743.1 KEGG: bgf:BC1003_0229 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_004226744.1 PFAM: protein of unknown function DUF140; KEGG: bgf:BC1003_0230 hypothetical protein YP_004226745.1 KEGG: bpy:Bphyt_0492 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_004226746.1 PFAM: Mammalian cell entry related domain protein; KEGG: bgf:BC1003_0232 mammalian cell entry related domain-containing protein YP_004226747.1 PFAM: protein of unknown function DUF330; KEGG: bgf:BC1003_0233 hypothetical protein YP_004226748.1 PFAM: VanZ family protein; KEGG: bgf:BC1003_0234 VanZ family protein YP_004226749.1 PFAM: Sucraseferredoxin family protein; KEGG: bgf:BC1003_0235 sucraseferredoxin family protein YP_004226750.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_0236 hypothetical protein YP_004226751.1 KEGG: bgf:BC1003_0237 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_004226752.1 PFAM: aminotransferase class IV; KEGG: bgf:BC1003_0238 aminotransferase class IV YP_004226753.1 PFAM: protein of unknown function DUF493; KEGG: bgf:BC1003_0239 hypothetical protein YP_004226754.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0240 LysR family transcriptional regulator YP_004226755.1 PFAM: Protein of unknown function DUF2917; KEGG: bgf:BC1003_0241 hypothetical protein YP_004226756.1 TIGRFAM: lipoate-protein ligase B; KEGG: bgf:BC1003_0242 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_004226757.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: bgf:BC1003_0243 lipoic acid synthetase; PFAM: Radical SAM domain protein YP_004226758.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: bgf:BC1003_0244 HAD-superfamily subfamily IB hydrolase, TIGR01490 YP_004226759.1 KEGG: bgf:BC1003_0245 sodium-dependent inorganic phosphate (Pi) transporter; TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein YP_004226760.1 KEGG: bgf:BC1003_0246 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004226761.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bgf:BC1003_0247 glycerophosphoryl diester phosphodiesterase YP_004226762.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_0248 extracellular solute-binding protein family 1 YP_004226763.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_0249 binding-protein-dependent transport systems inner membrane component YP_004226764.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_0250 binding-protein-dependent transport systems inner membrane component YP_004226765.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: bgf:BC1003_0251 spermidine/putrescine ABC transporter ATPase subunit; SMART: ATPase AAA YP_004226766.1 PFAM: sodium:dicarboxylate symporter; KEGG: bgf:BC1003_0252 sodium:dicarboxylate symporter YP_004226767.1 KEGG: bgf:BC1003_0253 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004226768.1 KEGG: bgf:BC1003_0254 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_004226769.1 PFAM: Redoxin domain protein; KEGG: bgf:BC1003_0255 redoxin domain-containing protein YP_004226770.1 KEGG: bgf:BC1003_0256 hypothetical protein YP_004226771.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: bgf:BC1003_0257 Mg chelatase subunit ChlI; SMART: ATPase AAA YP_004226772.1 PFAM: protein of unknown function DUF526; KEGG: bgf:BC1003_0258 hypothetical protein YP_004226773.1 PFAM: nitrogen regulatory protein P-II; KEGG: bge:BC1002_0251 nitrogen regulatory protein P-II YP_004226774.1 KEGG: bgf:BC1003_0260 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_004226775.1 KEGG: bgf:BC1003_0261 glutamate/cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA YP_004226776.1 TIGRFAM: glutathione synthetase; KEGG: bgf:BC1003_0262 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein YP_004226777.1 PFAM: PTS system subunit IIA; KEGG: bgf:BC1003_0263 PTS system subunit IIA YP_004226778.1 KEGG: bxe:Bxe_A4185 HPrNtr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004226779.1 KEGG: bgf:BC1003_0265 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_004226780.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bgf:BC1003_0266 UBA/ThiF-type NAD/FAD-binding protein YP_004226781.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: bgf:BC1003_0267 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_004226782.1 TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; KEGG: bgf:BC1003_0268 phosphoglycerate mutase 1 family; SMART: Phosphoglycerate mutase YP_004226783.1 KEGG: bgf:BC1003_0269 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004226784.1 KEGG: bgf:BC1003_0270 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin YP_004226785.1 KEGG: bgf:BC1003_0271 protein-export protein SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB YP_004226786.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bgf:BC1003_0272 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_004226787.1 KEGG: bgf:BC1003_0273 Appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_004226788.1 KEGG: bpy:Bphyt_0540 RNA methyltransferase, TrmH family, group 2; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004226789.1 PFAM: phosphoribosyltransferase; KEGG: bgf:BC1003_0275 phosphoribosyltransferase YP_004226790.1 PFAM: methyltransferase type 11; KEGG: bgf:BC1003_0276 methyltransferase type 11 YP_004226791.1 PFAM: Protein of unknown function DUF2244, transmembrane; KEGG: bgf:BC1003_0277 hypothetical protein YP_004226792.1 KEGG: bgf:BC1003_0278 cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; OmpA/MotB domain protein; cytochrome c class I YP_004226793.1 KEGG: bgf:BC1003_0279 cytochrome c oxidase subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_004226794.1 manually curated; KEGG: bgf:BC1003_0280 hypothetical protein YP_004226795.1 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: bgf:BC1003_0281 cytochrome c oxidase assembly protein CtaG/Cox11 YP_004226796.1 PFAM: Protein of unknown function DUF2970; KEGG: bgf:BC1003_0282 hypothetical protein YP_004226797.1 PFAM: cytochrome c oxidase subunit III; KEGG: bgf:BC1003_0283 cytochrome c oxidase subunit III YP_004226798.1 PFAM: Protein of unknown function DUF2909; KEGG: bgf:BC1003_0284 hypothetical protein YP_004226799.1 PFAM: Surfeit locus 1 family protein; KEGG: bgf:BC1003_0285 hypothetical protein YP_004226800.1 KEGG: bgf:BC1003_0286 hypothetical protein YP_004226801.1 PFAM: cytochrome oxidase assembly; KEGG: bgf:BC1003_0287 cytochrome oxidase assembly YP_004226802.1 KEGG: bgf:BC1003_0288 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_004226803.1 PFAM: electron transport protein SCO1/SenC; KEGG: bgf:BC1003_0289 electron transport protein SCO1/SenC YP_004226804.1 PFAM: YCII-related; KEGG: bgf:BC1003_0290 YCII-related protein YP_004226805.1 KEGG: bgf:BC1003_0291 lipoprotein, YaeC family; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004226806.1 KEGG: bgf:BC1003_0292 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR YP_004226807.1 KEGG: bgf:BC1003_0293 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH YP_004226808.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: bgf:BC1003_0294 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_004226809.1 KEGG: bgf:BC1003_0295 glutamine--fructose-6-phosphate transaminase (isomerizing); PFAM: sugar isomerase (SIS) YP_004226810.1 KEGG: bgf:BC1003_0296 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphocarrier, HPr family; PTS system, glucose subfamily, IIA subunit; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; phosphoryl transfer system HPr; sugar-specific permease EIIA 1 domain YP_004226811.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; KEGG: bgf:BC1003_0297 PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004226812.1 KEGG: bgf:BC1003_0298 RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_004226813.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: bgf:BC1003_0299 lipid A 3-O-deacylase-related protein YP_004226814.1 KEGG: bgf:BC1003_0300 hypothetical protein YP_004226815.1 PFAM: Glycosyl transferase, family 3-like; KEGG: bgf:BC1003_0301 glycosyl transferase family 3 YP_004226816.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bgf:BC1003_0302 fumarylacetoacetate (FAA) hydrolase YP_004226817.1 KEGG: bgf:BC1003_0303 maleylacetoacetate isomerase; TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain YP_004226818.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: bgf:BC1003_0304 signal recognition particle-docking protein FtsY; SMART: ATPase AAA YP_004226819.1 TIGRFAM: methyltransferase; KEGG: bgf:BC1003_0305 methyltransferase; PFAM: Conserved hypothetical protein CHP00095 YP_004226820.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: bgf:BC1003_0306 pantetheine-phosphate adenylyltransferase; PFAM: cytidylyltransferase YP_004226821.1 KEGG: bgf:BC1003_0307 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein YP_004226822.1 KEGG: bpy:Bphyt_0582 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004226823.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: bgf:BC1003_0309 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_004226824.1 KEGG: bgf:BC1003_0310 ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like YP_004226825.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: bgf:BC1003_0311 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_004226826.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: bgf:BC1003_0312 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_004226827.1 KEGG: bgf:BC1003_0313 outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB YP_004226828.1 SMART: Tetratricopeptide repeat; KEGG: bgf:BC1003_0314 TPR repeat-containing protein YP_004226829.1 SMART: Formamidopyrimidine-DNA glycosylase catalytic domain protein; TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: bgf:BC1003_0315 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_004226830.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; KEGG: bxe:Bxe_A4128 A/G-specific DNA-adenine glycosylase; SMART: HhH-GPD family protein; Helix-hairpin-helix DNA-binding class 1 YP_004226831.1 PFAM: peptidase S16 lon domain protein; KEGG: bgf:BC1003_0317 peptidase S16 YP_004226832.1 KEGG: bgf:BC1003_0318 hypothetical protein YP_004226833.1 PFAM: HPr serine kinase domain-containing protein; KEGG: bgf:BC1003_0319 HPr kinase YP_004226834.1 manually curated; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; KEGG: bgf:BC1003_0320 PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004226835.1 KEGG: bgf:BC1003_0321 ribosomal subunit interface protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_004226836.1 KEGG: bgf:BC1003_0322 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor; sigma-54 factor core-binding region YP_004226837.1 KEGG: bgf:BC1003_0323 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004226838.1 KEGG: bgf:BC1003_0324 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein YP_004226839.1 PFAM: protein of unknown function DUF1239; KEGG: bxe:Bxe_A4119 hypothetical protein YP_004226840.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: bgf:BC1003_0326 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004226841.1 SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: bgf:BC1003_0327 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_004226842.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; KEGG: bgf:BC1003_0328 sodium/hydrogen exchanger YP_004226843.1 KEGG: bgf:BC1003_0329 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004226844.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bge:BC1002_0329 lysine exporter protein (LysE/YggA) YP_004226845.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_0331 NUDIX hydrolase YP_004226846.1 KEGG: bgf:BC1003_0332 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_004226847.1 KEGG: bgf:BC1003_0333 hypothetical protein YP_004226848.1 KEGG: bgf:BC1003_0334 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004226849.1 PFAM: protein of unknown function UPF0118; KEGG: bgf:BC1003_0335 hypothetical protein YP_004226850.1 KEGG: bgf:BC1003_0336 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_004226851.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0337 major facilitator superfamily protein YP_004226852.1 KEGG: bgf:BC1003_0338 single-strand-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004226853.1 KEGG: bgf:BC1003_0339 hypothetical protein YP_004226854.1 KEGG: bgf:BC1003_0340 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004226855.1 PFAM: cytochrome c class I; KEGG: bgf:BC1003_0341 cytochrome c class I YP_004226856.1 PFAM: cytochrome c oxidase subunit I; KEGG: bgf:BC1003_0342 cytochrome c oxidase subunit I YP_004226857.1 PFAM: cytochrome c oxidase subunit II; KEGG: bgf:BC1003_0343 cytochrome c oxidase subunit II YP_004226858.1 KEGG: bgf:BC1003_0344 hypothetical protein YP_004226859.1 KEGG: bgf:BC1003_0345 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004226860.1 KEGG: bgf:BC1003_0346 periplasmic cytochrome c protein YP_004226861.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bgf:BC1003_0347 LysR family transcriptional regulator YP_004226862.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0348 major facilitator superfamily protein YP_004226863.1 KEGG: bgf:BC1003_0350 LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_004226864.1 KEGG: bgf:BC1003_0351 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver YP_004226865.1 PFAM: major intrinsic protein; KEGG: bgf:BC1003_0352 major intrinsic protein YP_004226866.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; PAS fold-4 domain protein; response regulator receiver; KEGG: bgf:BC1003_0353 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; histidine kinase A domain protein; response regulator receiver YP_004226867.1 KEGG: bgf:BC1003_0354 CHRD domain containing protein; PFAM: CHRD domain containing protein; SMART: CHRD domain containing protein YP_004226868.1 KEGG: bgf:BC1003_0355 lipase/esterase YP_004226869.1 KEGG: bgf:BC1003_0356 hypothetical protein YP_004226870.1 KEGG: bgf:BC1003_0357 major facilitator superfamily protein; manually curated; PFAM: major facilitator superfamily MFS_1 YP_004226871.1 KEGG: bgf:BC1003_0358 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004226872.1 PFAM: alanine racemase domain protein; KEGG: bgf:BC1003_0359 alanine racemase domain-containing protein YP_004226873.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bgf:BC1003_0360 RpiR family transcriptional regulator YP_004226874.1 KEGG: bgf:BC1003_0361 N-acyl-D-amino-acid deacylase; PFAM: Amidohydrolase 3; D-aminoacylase domain protein YP_004226875.1 PFAM: Endoribonuclease L-PSP; KEGG: bgf:BC1003_0362 endoribonuclease L-PSP YP_004226876.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: bgf:BC1003_0363 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004226877.1 KEGG: bgf:BC1003_0364 5'-nucleotidase; PFAM: 5-nucleotidase YP_004226878.1 KEGG: bgf:BC1003_0365 threonine dehydratase, biosynthetic; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain-containing protein YP_004226879.1 KEGG: bgf:BC1003_0366 hypothetical protein YP_004226880.1 KEGG: bgf:BC1003_0367 hypothetical protein YP_004226881.1 KEGG: bgf:BC1003_0369 hypothetical protein YP_004226882.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_0370 NAD-dependent epimerase/dehydratase YP_004226883.1 KEGG: bgf:BC1003_0371 integral membrane protein YP_004226884.1 PFAM: Protein of unknown function DUF3683; Protein of unknown function DUF3400; protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: bgf:BC1003_0372 FAD linked oxidase domain-containing protein YP_004226885.1 PFAM: histidine triad (HIT) protein; KEGG: bgf:BC1003_0373 histidine triad (HIT) protein YP_004226886.1 KEGG: bgf:BC1003_0374 hypothetical protein YP_004226887.1 KEGG: bgf:BC1003_0375 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_004226888.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: bgf:BC1003_0376 import inner membrane translocase subunit Tim44 YP_004226889.1 PFAM: Sterol-binding domain protein; KEGG: bgf:BC1003_0377 sterol-binding protein YP_004226890.1 KEGG: bgf:BC1003_0378 2-polyprenylphenol 6-hydroxylase; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain-containing protein YP_004226891.1 PFAM: thiopurine S-methyltransferase; KEGG: bgf:BC1003_0379 thiopurine S-methyltransferase YP_004226892.1 TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: bgf:BC1003_0380 regulatory protein, FmdB family; SMART: regulatory protein FmdB YP_004226893.1 PFAM: protein of unknown function DUF502; KEGG: bgf:BC1003_0381 hypothetical protein YP_004226894.1 KEGG: bgf:BC1003_0382 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_004226895.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_0383 NUDIX hydrolase YP_004226896.1 SMART: phospholipase D/Transphosphatidylase; KEGG: bgf:BC1003_0384 phospholipase D/transphosphatidylase YP_004226897.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_0385 regulatory protein TetR YP_004226898.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase, N-terminal, bacteria; KEGG: bgf:BC1003_0386 acyl-CoA dehydrogenase domain-containing protein YP_004226899.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_0387 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein YP_004226900.1 KEGG: bgf:BC1003_0388 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004226901.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_0664 enoyl-CoA hydratase YP_004226902.1 KEGG: bgf:BC1003_0390 formate dehydrogenase family accessory protein FdhD; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_004226903.1 PFAM: Conserved hypothetical protein CHP02664, nitrate reductase-associated; KEGG: bgf:BC1003_0391 hypothetical protein YP_004226904.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; PAS fold-4 domain protein; GGDEF domain containing protein; KEGG: bgf:BC1003_0392 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004226905.1 PFAM: thioesterase superfamily protein; KEGG: bgf:BC1003_0395 thioesterase superfamily protein YP_004226907.1 KEGG: bgf:BC1003_0396 ABC transporter; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA YP_004226908.1 PFAM: Nucleotidyl transferase; KEGG: bgf:BC1003_0397 nucleotidyl transferase YP_004226909.1 PFAM: aminoglycoside phosphotransferase; KEGG: bgf:BC1003_0398 aminoglycoside phosphotransferase YP_004226910.1 PFAM: organic solvent tolerance protein; KEGG: bgf:BC1003_0399 organic solvent tolerance protein YP_004226911.1 PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bgf:BC1003_0400 SurA domain-containing protein YP_004226912.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bgf:BC1003_0401 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA YP_004226913.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: bgf:BC1003_0402 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_004226914.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_0403 hypothetical protein YP_004226915.1 KEGG: bgf:BC1003_0404 porin gram-negative type YP_004226916.1 TIGRFAM: lactoylglutathione lyase; KEGG: bgf:BC1003_0405 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004226917.1 PFAM: protein of unknown function DUF45; KEGG: bgf:BC1003_0406 hypothetical protein YP_004226918.1 KEGG: bgf:BC1003_0407 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004226919.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: bgf:BC1003_0408 histidinol-phosphate phosphatase family protein YP_004226920.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: bgf:BC1003_0409 glycyl-tRNA synthetase subunit beta YP_004226921.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: bgf:BC1003_0410 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit YP_004226922.1 KEGG: bgf:BC1003_0411 glutamate synthase (NADPH); PFAM: ferredoxin-dependent glutamate synthase YP_004226923.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: bgf:BC1003_0412 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_004226924.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_0413 NUDIX hydrolase YP_004226925.1 KEGG: bgf:BC1003_0414 NAD(P)(+) transhydrogenase (AB-specific); PFAM: alanine dehydrogenase/PNT domain protein YP_004226926.1 KEGG: bgf:BC1003_0415 NAD(P) transhydrogenase subunit alpha YP_004226927.1 KEGG: bgf:BC1003_0416 NAD(P)(+) transhydrogenase (AB-specific); PFAM: NAD(P) transhydrogenase beta subunit YP_004226928.1 KEGG: bgf:BC1003_0417 helix-turn-helix type 11 domain-containing protein YP_004226929.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bgf:BC1003_0418 glyoxalase/bleomycin resistance protein/dioxygenase YP_004226930.1 KEGG: bgf:BC1003_0419 rRNA (guanine-N(2)-)-methyltransferase; PFAM: RNA methylase; THUMP domain-containing protein YP_004226931.1 PFAM: protein of unknown function DUF330; KEGG: bgf:BC1003_0420 hypothetical protein YP_004226932.1 PFAM: Mammalian cell entry related domain protein; KEGG: bgf:BC1003_0421 mammalian cell entry related domain-containing protein YP_004226933.1 PFAM: Paraquat-inducible protein A; KEGG: bgf:BC1003_0422 paraquat-inducible protein A YP_004226934.1 PFAM: Paraquat-inducible protein A; KEGG: bgf:BC1003_0423 paraquat-inducible protein A YP_004226935.1 PFAM: cytochrome b/b6 domain; KEGG: bgf:BC1003_0424 cytochrome b-561 membrane protein YP_004226936.1 KEGG: bgf:BC1003_0425 YceI family protein; PFAM: YceI family protein; SMART: YceI family protein YP_004226937.1 KEGG: bgf:BC1003_0426 YceI family protein; PFAM: YceI family protein; SMART: YceI family protein YP_004226938.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0427 major facilitator superfamily protein YP_004226939.1 KEGG: bgf:BC1003_0431 protein-export membrane protein SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004226940.1 KEGG: bgf:BC1003_0432 protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004226941.1 KEGG: bgf:BC1003_0433 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_004226942.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: bgf:BC1003_0434 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_004226943.1 KEGG: bgf:BC1003_0435 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_004226944.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: bgf:BC1003_0436 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein YP_004226945.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0437 LysR family transcriptional regulator YP_004226946.1 KEGG: bgf:BC1003_0438 hypothetical protein YP_004226947.1 KEGG: bgf:BC1003_0439 catalase; PFAM: Catalase related subgroup; Catalase domain protein YP_004226948.1 KEGG: bgf:BC1003_0440 hypothetical protein YP_004226949.1 PFAM: Ferritin Dps family protein; KEGG: bgf:BC1003_0441 ferritin Dps family protein YP_004226950.1 KEGG: bgf:BC1003_0442 4-hydroxybenzoate polyprenyl transferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase YP_004226951.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: bgf:BC1003_0443 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004226952.1 PFAM: alanine racemase domain protein; KEGG: bgf:BC1003_0444 alanine racemase domain-containing protein YP_004226953.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bgf:BC1003_0445 hypothetical protein YP_004226954.1 PFAM: FAD linked oxidase domain protein; KEGG: bgf:BC1003_0446 FAD linked oxidase domain-containing protein YP_004226955.1 KEGG: bgf:BC1003_0447 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein YP_004226956.1 PFAM: FAD linked oxidase domain protein; KEGG: bgf:BC1003_0448 FAD linked oxidase domain-containing protein YP_004226957.1 TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: bge:BC1002_0491 ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_004226958.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; globin; KEGG: bgf:BC1003_0450 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_004226959.1 KEGG: bge:BC1002_0492 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004226960.1 PFAM: protein of unknown function DUF891; KEGG: bxe:Bxe_A3974 hypothetical protein YP_004226961.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bgf:BC1003_0451 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004226962.1 PFAM: peptidase U62; KEGG: bgf:BC1003_0452 peptidase U62 YP_004226963.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bgf:BC1003_0453 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004226964.1 KEGG: bgf:BC1003_0454 hypothetical protein YP_004226965.1 KEGG: bgf:BC1003_0455 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase YP_004226966.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: bgf:BC1003_0456 DNA repair protein RecN; SMART: ATPase AAA YP_004226967.1 PFAM: ATP-NAD/AcoX kinase; KEGG: bgf:BC1003_0457 ATP-NAD/AcoX kinase YP_004226968.1 KEGG: bge:BC1002_0501 heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like; protein of unknown function DUF293 YP_004226969.1 TIGRFAM: ferrochelatase; KEGG: bxe:Bxe_A3965 ferrochelatase; PFAM: ferrochelatase YP_004226970.1 KEGG: bgf:BC1003_0460 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004226971.1 KEGG: bgf:BC1003_0461 hypothetical protein YP_004226972.1 PFAM: GrpE protein; KEGG: bgf:BC1003_0462 GrpE protein YP_004226973.1 KEGG: bgf:BC1003_0463 thioredoxin protein YP_004226974.1 KEGG: bgf:BC1003_0464 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_004226975.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: bpy:Bphyt_0738 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_004226976.1 KEGG: bgf:BC1003_0466 para-aminobenzoate synthase subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; aminotransferase class IV YP_004226977.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: bgf:BC1003_0467 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_004226978.1 PFAM: deoxynucleoside kinase; KEGG: bgf:BC1003_0468 deoxynucleoside kinase YP_004226979.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: bgf:BC1003_0469 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_004226980.1 KEGG: bgf:BC1003_0470 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region YP_004226981.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: bgf:BC1003_0471 HAD-superfamily subfamily IB hydrolase, TIGR01490 YP_004226982.1 KEGG: bgf:BC1003_0472 DnaA regulatory inactivator Hda; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA YP_004226983.1 PFAM: protein of unknown function UPF0118; KEGG: bgf:BC1003_0473 hypothetical protein YP_004226984.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: bgf:BC1003_0474 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004226985.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: bgf:BC1003_0475 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_004226986.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: bgf:BC1003_0476 DNA mismatch repair protein MutL; SMART: MutL dimerisation; ATP-binding region ATPase domain protein YP_004226987.1 PFAM: SNARE associated Golgi protein; KEGG: bgf:BC1003_0477 SNARE associated Golgi protein-related protein YP_004226988.1 KEGG: bgf:BC1003_0478 hypothetical protein YP_004226989.1 TIGRFAM: tol-pal system protein YbgF; KEGG: bpy:Bphyt_0757 tol-pal system protein YbgF YP_004226990.1 KEGG: bgf:BC1003_0480 peptidoglycan-associated lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_004226991.1 KEGG: bgf:BC1003_0481 Tol-Pal system beta propeller repeat-containing protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain-containing protein; WD40-like beta Propeller containing protein YP_004226992.1 TIGRFAM: protein TolA; TonB family protein; KEGG: bgf:BC1003_0482 protein TolA YP_004226993.1 KEGG: bgf:BC1003_0483 protein TolR; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR YP_004226994.1 KEGG: bgf:BC1003_0484 protein TolQ; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel YP_004226995.1 KEGG: bgf:BC1003_0485 tol-pal system-associated acyl-CoA thioesterase; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein YP_004226996.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_0486 short-chain dehydrogenase/reductase SDR YP_004226997.1 KEGG: bpy:Bphyt_0765 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_004226998.1 PFAM: ATP-cone domain protein; KEGG: bgf:BC1003_0488 ATP-cone domain-containing protein YP_004226999.1 KEGG: bgf:BC1003_0489 hypothetical protein YP_004227000.1 KEGG: bgf:BC1003_0490 hypothetical protein YP_004227001.1 KEGG: bgf:BC1003_0491 hypothetical protein YP_004227002.1 KEGG: bgf:BC1003_0492 hypothetical protein YP_004227003.1 KEGG: bgf:BC1003_0493 hypothetical protein YP_004227004.1 PFAM: Protein of unknown function DUF3318; KEGG: bgf:BC1003_0494 hypothetical protein YP_004227005.1 KEGG: bgf:BC1003_0495 transmembrane protein YP_004227006.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bgf:BC1003_0496 hypothetical protein YP_004227007.1 KEGG: bgf:BC1003_0497 peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_004227008.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_0498 acyl-CoA dehydrogenase domain-containing protein YP_004227009.1 KEGG: bgf:BC1003_0499 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004227010.1 PFAM: EAL domain protein; KEGG: bgf:BC1003_0500 EAL domain-containing protein YP_004227011.1 TIGRFAM: homogentisate 1,2-dioxygenase; KEGG: bxe:Bxe_A3900 homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase YP_004227012.1 TIGRFAM: fumarylacetoacetase; KEGG: bgf:BC1003_0503 fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969 YP_004227013.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0504 major facilitator superfamily protein YP_004227014.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_0505 enoyl-CoA hydratase/isomerase YP_004227015.1 KEGG: bpy:Bphyt_0786 hypothetical protein YP_004227016.1 KEGG: bgf:BC1003_0508 YidE/YbjL duplication; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain-containing protein; TrkA-C domain protein YP_004227017.1 PFAM: aminotransferase class I and II; KEGG: bgf:BC1003_0509 class I/II aminotransferase YP_004227018.1 PFAM: aminotransferase class V; KEGG: bgf:BC1003_0510 class I/II aminotransclass V aminotransferase YP_004227020.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0521 major facilitator superfamily protein YP_004227021.1 KEGG: bgf:BC1003_0522 xanthine dehydrogenase small subunit; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; ferredoxin; CO dehydrogenase flavoprotein domain protein; [2Fe-2S]-binding domain-containing protein YP_004227022.1 TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; KEGG: bgf:BC1003_0523 xanthine dehydrogenase, molybdopterin-binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead YP_004227023.1 TIGRFAM: xanthine dehydrogenase accessory protein XdhC; KEGG: bgf:BC1003_0524 xanthine dehydrogenase accessory protein XdhC YP_004227024.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A3883 LysR family transcriptional regulator YP_004227025.1 PFAM: DSBA oxidoreductase; KEGG: bgf:BC1003_0526 DsbA oxidoreductase YP_004227026.1 KEGG: bgf:BC1003_0527 hypothetical protein YP_004227027.1 PFAM: transport-associated; KEGG: bgf:BC1003_0528 transport-associated protein YP_004227028.1 KEGG: bgf:BC1003_0533 hypothetical protein YP_004227029.1 PFAM: protein of unknown function DUF81; KEGG: bgf:BC1003_0534 hypothetical protein YP_004227030.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_0535 lysine exporter protein LysE/YggA YP_004227031.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0536 LysR family transcriptional regulator YP_004227032.1 PFAM: pyruvate carboxyltransferase; KEGG: bgf:BC1003_0537 pyruvate carboxyltransferase YP_004227033.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bgf:BC1003_0538 L-carnitine dehydratase/bile acid-inducible protein F YP_004227034.1 KEGG: bgf:BC1003_0539 major facilitator superfamily protein YP_004227035.1 KEGG: bgf:BC1003_0540 glycosyl transferase group 1; manually curated; PFAM: glycosyl transferase group 1 YP_004227036.1 KEGG: bgf:BC1003_0541 ricin B lectin; PFAM: LmbE family protein; Ricin B lectin; SMART: Ricin B lectin YP_004227037.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_0542 NUDIX hydrolase YP_004227038.1 KEGG: bxe:Bxe_A3871 hypothetical protein YP_004227039.1 KEGG: bgf:BC1003_0543 hypothetical protein YP_004227040.1 KEGG: bgf:BC1003_0545 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004227041.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bgf:BC1003_0546 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase YP_004227042.1 TIGRFAM: UDP-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: bgf:BC1003_0547 UDP-phosphate glucose phosphotransferase; PFAM: sugar transferase YP_004227043.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bgf:BC1003_0548 polysaccharide export protein YP_004227044.1 TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; KEGG: bgf:BC1003_0549 exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis protein YP_004227045.1 KEGG: bgf:BC1003_0550 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004227046.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_0551 NAD-dependent epimerase/dehydratase YP_004227047.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_0552 glycosyl transferase group 1 YP_004227048.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_0553 glycosyl transferase group 1 YP_004227049.1 KEGG: bgf:BC1003_0554 hypothetical protein YP_004227050.1 KEGG: bgf:BC1003_0555 hypothetical protein YP_004227051.1 PFAM: GMC oxidoreductase; FAD dependent oxidoreductase; KEGG: bgf:BC1003_0556 monooxygenase FAD-binding protein YP_004227052.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_0557 glycosyl transferase group 1 YP_004227053.1 KEGG: bgf:BC1003_0558 hypothetical protein YP_004227054.1 PFAM: acyltransferase 3; KEGG: bgf:BC1003_0559 acyltransferase 3 YP_004227055.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_0560 glycosyl transferase group 1 YP_004227056.1 PFAM: polysaccharide biosynthesis protein; KEGG: bgf:BC1003_0561 polysaccharide biosynthesis protein YP_004227057.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_0562 glycosyl transferase group 1 YP_004227058.1 KEGG: bgf:BC1003_0563 hypothetical protein YP_004227059.1 KEGG: bgf:BC1003_0564 hypothetical protein YP_004227060.1 KEGG: bgf:BC1003_0565 hypothetical protein YP_004227061.1 PFAM: Negative transcriptional regulator; KEGG: bgf:BC1003_0566 FMN-binding negative transcriptional regulator YP_004227062.1 KEGG: bcm:Bcenmc03_5015 transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004227063.1 KEGG: bgf:BC1003_0567 hypothetical protein YP_004227064.1 KEGG: bgf:BC1003_0568 hypothetical protein YP_004227065.1 TIGRFAM: methyltransferase FkbM family; KEGG: bgf:BC1003_0569 methyltransferase FkbM family YP_004227066.1 PFAM: Tannase and feruloyl esterase; KEGG: dda:Dd703_2302 tannase and feruloyl esterase YP_004227067.1 KEGG: slt:Slit_2141 flagellar biosynthetic protein YP_004227068.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bxe:Bxe_B0156 transposase YP_004227069.1 PFAM: glycosyl transferase family 9; KEGG: bgf:BC1003_5782 glycosyl transferase family 9 YP_004227070.1 KEGG: bgf:BC1003_1726 hypothetical protein YP_004227071.1 PFAM: O-methyltransferase family 3; KEGG: bge:BC1002_4928 methyltransferase type 11 YP_004227072.1 KEGG: bpy:Bphyt_4336 hypothetical protein YP_004227073.1 KEGG: bge:BC1002_4931 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004227074.1 PFAM: NodS family protein; KEGG: gau:GAU_3119 methyltransferase YP_004227075.1 PFAM: aldo/keto reductase; KEGG: bgf:BC1003_3532 aldo/keto reductase YP_004227076.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_3531 short-chain dehydrogenase/reductase SDR YP_004227077.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_3530 LysR family transcriptional regulator YP_004227078.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bac:BamMC406_6133 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004227079.1 PFAM: major facilitator superfamily MFS_1; KEGG: bac:BamMC406_6132 major facilitator transporter YP_004227080.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bac:BamMC406_6131 LysR family transcriptional regulator YP_004227081.1 KEGG: bph:Bphy_5153 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004227082.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5929 major facilitator superfamily protein YP_004227083.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: bph:Bphy_5155 altronate dehydratase; SMART: SAF domain protein YP_004227084.1 KEGG: bph:Bphy_5156 L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase YP_004227085.1 KEGG: bgf:BC1003_5932 simple sugar transport system substrate-binding protein YP_004227086.1 KEGG: bph:Bphy_5158 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227087.1 PFAM: inner-membrane translocator; KEGG: bph:Bphy_5159 inner-membrane translocator YP_004227088.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_5935 inner-membrane translocator YP_004227089.1 KEGG: bgf:BC1003_5936 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein YP_004227090.1 KEGG: bph:Bphy_5162 ABC transporter YP_004227091.1 KEGG: phe:Phep_1779 cyclic nucleotide-binding YP_004227092.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rec:RHECIAT_PC0000773 lactoylglutathione lyase protein YP_004227093.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_5894 major facilitator transporter YP_004227094.1 KEGG: bph:Bphy_5895 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004227095.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc1092 transcriptional regulatory DNA-binding transcription regulator protein YP_004227096.1 PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: rso:RSc1091 ferredoxin oxidoreductase protein YP_004227097.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: rso:RSc1090 salicylate-5-hydroxylase large oxygenase component oxidoreductase protein YP_004227098.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: rsl:RPSI07_2302 salicylate-5-hydroxylase small oxygenase component oxidoreductase protein (NagH) YP_004227099.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: reu:Reut_B4721 Rieske (2Fe-2S) region YP_004227100.1 KEGG: bcj:BCAM1271 gentisate 1,2-dioxygenase; TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2 conserved barrel domain protein YP_004227101.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bch:Bcen2424_4146 fumarylacetoacetate (FAA) hydrolase YP_004227102.1 KEGG: reu:Reut_B5804 maleylacetoacetate isomerase; TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain YP_004227103.1 KEGG: pol:Bpro_2058 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004227104.1 KEGG: pol:Bpro_2059 flavin reductase-like, FMN-binding; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_004227105.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain-containing protein; KEGG: pol:Bpro_2060 acyl-CoA dehydrogenase, C-terminal type2 YP_004227106.1 PFAM: amidohydrolase 2; KEGG: ara:Arad_7160 metal dependent hydrolase YP_004227107.1 PFAM: major facilitator superfamily MFS_1; KEGG: rcu:RCOM_1974430 glucose transporter YP_004227108.1 PFAM: porin Gram-negative type; KEGG: bph:Bphy_6875 porin YP_004227109.1 PFAM: peptidase S13; KEGG: bpy:Bphyt_6230 peptidase S13 YP_004227110.1 PFAM: Domain of unknown function DUF2520; oxidoreductase/dehydrogenase, Rossmann-like domain; KEGG: rfr:Rfer_2173 hypothetical protein YP_004227111.1 PFAM: Aldehyde Dehydrogenase; KEGG: bch:Bcen2424_5904 aldehyde dehydrogenase YP_004227112.1 TIGRFAM: tartrate dehydrogenase; KEGG: bcj:BCAS0278 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004227113.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcj:BCAS0279 LysR family regulatory protein YP_004227114.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcj:BCAS0280 major facilitator superfamily protein YP_004227115.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bcj:BCAS0281 2-hydroxy-3-oxopropionate reductase YP_004227116.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: vap:Vapar_3912 FMN-dependent alpha-hydroxy acid dehydrogenase YP_004227117.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B2942 hypothetical protein YP_004227118.1 KEGG: rsl:RPSI07_1835 poly[D(-)-3-hydroxybutyrate] depolymerase; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_004227119.1 PFAM: Glutathione S-transferase domain; KEGG: bcj:BCAM0775 glutathione-S-transferase family protein YP_004227120.1 KEGG: rsl:RPSI07_mp0119 membrane protein of unknown function YP_004227121.1 KEGG: bpy:Bphyt_1075 hypothetical protein YP_004227122.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_0659 glutathione S-transferase YP_004227123.1 KEGG: bgf:BC1003_0662 L-asparaginase II; manually curated; PFAM: L-asparaginase II YP_004227124.1 KEGG: bac:BamMC406_5360 hypothetical protein YP_004227125.1 PFAM: major facilitator superfamily MFS_1; KEGG: rsl:RPSI07_mp0231 general substrate transporter:major facilitator superfamily MFS_1 YP_004227126.1 TIGRFAM: amidohydrolase; KEGG: rme:Rmet_0021 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004227127.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rsl:RPSI07_mp0229 transcriptional regulator, LysR family YP_004227128.1 KEGG: hvo:HVO_B0354 hypothetical protein YP_004227129.1 KEGG: bam:Bamb_6265 hypothetical protein YP_004227130.1 KEGG: ava:Ava_3867 WD-40 repeat-containing serine/threonin protein kinase YP_004227131.1 KEGG: bph:Bphy_7058 hypothetical protein YP_004227132.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bmj:BMULJ_04142 NADPH2:quinone reductase YP_004227134.1 KEGG: ebi:EbC_34940 L-fucose transporter; TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1 YP_004227135.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: reu:Reut_B4130 UDP-glucose/GDP-mannose dehydrogenase YP_004227136.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: reh:H16_A0634 hypothetical protein YP_004227137.1 PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: reh:H16_A0633 protocatechuate 3,4-dioxygenase beta subunit YP_004227138.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bam:Bamb_3826 antibiotic biosynthesis monooxygenase YP_004227139.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_A0572 transcriptional regulator, LysR family YP_004227140.1 KEGG: bgf:BC1003_3861 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_004227141.1 PFAM: FAD dependent oxidoreductase; KEGG: bja:blr7718 hypothetical protein YP_004227142.1 PFAM: YheO-like domain-containing protein; KEGG: bcm:Bcenmc03_3404 YheO domain-containing protein YP_004227143.1 KEGG: rme:Rmet_4824 ornithine cyclodeaminase; PFAM: ornithine cyclodeaminase/mu-crystallin YP_004227144.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bcm:Bcenmc03_3403 pyridoxal-5'-phosphate-dependent protein beta subunit YP_004227145.1 KEGG: bcm:Bcenmc03_3402 asparaginase/glutaminase; PFAM: Asparaginase/glutaminase; SMART: Asparaginase/glutaminase YP_004227146.1 PFAM: Extracellular ligand-binding receptor; KEGG: bcm:Bcenmc03_3401 extracellular ligand-binding receptor YP_004227147.1 SMART: beta-lactamase domain protein; KEGG: bge:BC1002_1279 beta-lactamase domain protein YP_004227148.1 KEGG: bge:BC1002_4515 Cl-channel voltage-gated family protein; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; SMART: CBS domain containing protein YP_004227149.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: cch:Cag_1056 hemolysin activation/secretion protein-like YP_004227150.1 KEGG: hse:Hsero_1000 filamentous hemagglutinin outer membrane protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein YP_004227151.1 SMART: phospholipase D/Transphosphatidylase; KEGG: bpy:Bphyt_4470 phospholipase D/transphosphatidylase YP_004227152.1 KEGG: bgf:BC1003_0733 chaperonin Cpn10; PFAM: Chaperonin Cpn10; SMART: chaperonin Cpn10 YP_004227153.1 KEGG: bgf:BC1003_0734 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_004227154.1 TIGRFAM: adenylylsulfate kinase; KEGG: bgf:BC1003_0735 adenylylsulfate kinase; PFAM: adenylylsulfate kinase YP_004227155.1 PFAM: Chondroitin 4-O-sulfotransferase; KEGG: bge:BC1002_0596 hypothetical protein YP_004227156.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: bgf:BC1003_0736 phosphomethylpyrimidine kinase type-1 YP_004227157.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bge:BC1002_0598 rubredoxin-type Fe(Cys)4 protein YP_004227158.1 KEGG: bgf:BC1003_0738 hypothetical protein YP_004227159.1 PFAM: protein of unknown function DUF179; KEGG: bgf:BC1003_0739 hypothetical protein YP_004227160.1 KEGG: bgf:BC1003_0740 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_004227161.1 KEGG: bgf:BC1003_0741 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004227162.1 KEGG: bgf:BC1003_0742 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_004227163.1 KEGG: bgf:BC1003_0743 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_004227164.1 KEGG: bgf:BC1003_0744 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004227165.1 TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: bgf:BC1003_0745 bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase YP_004227166.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_0746 NAD-dependent epimerase/dehydratase YP_004227167.1 KEGG: bgf:BC1003_0747 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004227168.1 KEGG: bpy:Bphyt_0879 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_004227169.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: bge:BC1002_0610 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_004227170.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: bge:BC1002_0611 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_004227171.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bge:BC1002_0612 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase YP_004227172.1 PFAM: ABC transporter; KEGG: bge:BC1002_0613 ABC transporter YP_004227173.1 KEGG: bge:BC1002_0614 ABC transporter related protein; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227174.1 KEGG: bge:BC1002_0615 hypothetical protein YP_004227175.1 PFAM: polysaccharide deacetylase; KEGG: bge:BC1002_0616 polysaccharide deacetylase YP_004227176.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: bge:BC1002_0617 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_004227177.1 PFAM: glycosyl transferase group 1; KEGG: bge:BC1002_0618 glycosyl transferase group 1 YP_004227178.1 PFAM: glycosyl transferase group 1; KEGG: bge:BC1002_0619 glycosyl transferase group 1 YP_004227179.1 PFAM: glycosyl transferase family 2; KEGG: azo:azo3594 glycosyltransferase YP_004227180.1 PFAM: FAD dependent oxidoreductase; KEGG: azo:azo3593 hypothetical protein YP_004227181.1 KEGG: azo:azo3592 hypothetical protein YP_004227182.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: azo:azo3591 sugar or sugar nucleotide oxidoreductase YP_004227183.1 PFAM: small multidrug resistance protein; KEGG: azo:azo3590 multidrug efflux transporter protein YP_004227184.1 PFAM: glycosyl transferase family 2; KEGG: azo:azo3589 glycosyltransferase YP_004227185.1 KEGG: oan:Oant_2778 iron-hydroxamate transporter permease subunit YP_004227186.1 KEGG: bge:BC1002_0626 methyltransferase type 12; manually curated; PFAM: methyltransferase type 12 YP_004227187.1 PFAM: methyltransferase type 11; KEGG: cyn:Cyan7425_2252 methyltransferase type 12 YP_004227188.1 KEGG: bge:BC1002_0632 hypothetical protein YP_004227189.1 KEGG: bge:BC1002_0631 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase YP_004227190.1 PFAM: glycosyl transferase group 1; KEGG: bge:BC1002_0630 glycosyl transferase group 1 YP_004227191.1 KEGG: bge:BC1002_0629 mannosyltransferase B YP_004227192.1 PFAM: glycosyl transferase group 1; KEGG: bge:BC1002_0633 glycosyl transferase group 1 YP_004227193.1 PFAM: glycosyl transferase group 1; KEGG: bge:BC1002_0634 glycosyl transferase group 1 YP_004227194.1 PFAM: glycosyl transferase family 2; KEGG: bge:BC1002_0635 glycosyl transferase family 2 YP_004227195.1 PFAM: glycosyl transferase group 1; KEGG: bge:BC1002_0636 glycosyl transferase group 1 YP_004227196.1 KEGG: rmu:RMDY18_08300 prolipoprotein diacylglyceryltransferase YP_004227197.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bge:BC1002_0637 NAD-dependent epimerase/dehydratase YP_004227198.1 PFAM: glycosyl transferase family 4, conserved region; KEGG: bge:BC1002_0638 glycosyl transferase family 4, conserved region YP_004227199.1 PFAM: polysaccharide biosynthesis protein CapD; CoA-binding domain protein; KEGG: bge:BC1002_0639 polysaccharide biosynthesis protein CapD YP_004227200.1 PFAM: glycosyl transferase family 4, conserved region; KEGG: bpy:Bphyt_0903 glycosyl transferase family 4 YP_004227201.1 KEGG: bgf:BC1003_0797 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004227202.1 KEGG: bgf:BC1003_0798 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004227203.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_0799 glycosyl transferase group 1 YP_004227204.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_0800 glycosyl transferase family 2 YP_004227205.1 PFAM: polysaccharide biosynthesis protein; KEGG: bgf:BC1003_0801 polysaccharide biosynthesis protein YP_004227206.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: bgf:BC1003_0802 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_004227207.1 manually curated; TIGRFAM: lipopolysaccharide heptosyltransferase I; KEGG: bxe:Bxe_A3700 lipopolysaccharide heptosyltransferase-1; PFAM: glycosyl transferase family 9 YP_004227208.1 PFAM: Protein of unknown function DUF2843; KEGG: bgf:BC1003_0804 hypothetical protein YP_004227209.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; glycosyl transferase group 1; KEGG: bgf:BC1003_0805 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_004227210.1 KEGG: bgf:BC1003_0806 urease accessory protein UreG; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K YP_004227211.1 PFAM: urease accessory protein UreF; KEGG: bgf:BC1003_0807 urease accessory protein UreF YP_004227212.1 PFAM: urease accessory protein UreE; KEGG: bpy:Bphyt_0927 urease accessory protein UreE YP_004227213.1 TIGRFAM: urease, alpha subunit; KEGG: bgf:BC1003_0809 urease subunit alpha; PFAM: amidohydrolase; urease alpha-subunit domain-containing protein YP_004227214.1 TIGRFAM: urease, beta subunit; KEGG: bgf:BC1003_0810 urease subunit beta; PFAM: urease beta subunit YP_004227215.1 TIGRFAM: urease, gamma subunit; KEGG: bgf:BC1003_0811 urease subunit gamma; PFAM: urease gamma subunit region YP_004227216.1 KEGG: bgf:BC1003_0812 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004227217.1 PFAM: urease accessory protein UreD; KEGG: bgf:BC1003_0813 urease accessory protein UreD YP_004227218.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: bgf:BC1003_0814 UreA ABC transporter ATP-binding protein UrtE; SMART: ATPase AAA YP_004227219.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bgf:BC1003_0815 UreA ABC transporter ATP-binding protein UrtD; SMART: ATPase AAA YP_004227220.1 KEGG: bpy:Bphyt_0952 UreA ABC transporter, permease protein UrtC; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator YP_004227221.1 KEGG: bgf:BC1003_0817 UreA ABC transporter permease UrtB; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator YP_004227222.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bgf:BC1003_0818 UreA ABC transporter UreA-binding protein YP_004227223.1 PFAM: Protein of unknown function DUF3443; KEGG: bgf:BC1003_0819 hypothetical protein YP_004227224.1 KEGG: cho:Chro.30449 hypothetical protein YP_004227225.1 KEGG: cbr:CBG12065 Hypothetical protein CBG12065 YP_004227226.1 PFAM: Protein of unknown function DUF2844; KEGG: bgf:BC1003_0820 hypothetical protein YP_004227227.1 PFAM: Protein of unknown function DUF3443; KEGG: bgf:BC1003_0821 hypothetical protein YP_004227228.1 PFAM: Protein of unknown function DUF2844; KEGG: bxe:Bxe_A3679 hypothetical protein YP_004227229.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bph:Bphy_4607 short-chain dehydrogenase/reductase SDR YP_004227230.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_4608 LysR family transcriptional regulator YP_004227231.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_0823 alpha/beta hydrolase fold protein YP_004227232.1 KEGG: bgf:BC1003_0826 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004227233.1 KEGG: bgf:BC1003_0827 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004227234.1 KEGG: bgf:BC1003_0828 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004227235.1 KEGG: bgf:BC1003_0829 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227236.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_0830 inner-membrane translocator YP_004227237.1 KEGG: bgf:BC1003_0831 ABC sugar transporter periplasmic ligand-binding protein YP_004227238.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; AP endonuclease 2 domain protein; KEGG: bgf:BC1003_0832 xylose isomerase domain-containing protein YP_004227239.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bgf:BC1003_0833 oxidoreductase domain-containing protein YP_004227240.1 KEGG: bgf:BC1003_0834 hypothetical protein YP_004227241.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_0835 extracellular ligand-binding receptor YP_004227242.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0836 LysR family transcriptional regulator YP_004227243.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: bgf:BC1003_0837 nitrite and sulphite reductase 4Fe-4S region YP_004227244.1 PFAM: Uncharacterised conserved protein UCP030820; KEGG: bgf:BC1003_0838 hypothetical protein YP_004227245.1 TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; KEGG: bgf:BC1003_0839 adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase YP_004227246.1 KEGG: bgf:BC1003_0840 sulfate adenylyltransferase; PFAM: phosphoadenosine phosphosulfate reductase YP_004227247.1 TIGRFAM: sulfate adenylyltransferase, large subunit; KEGG: bgf:BC1003_0841 sulfate adenylyltransferase large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004227248.1 KEGG: bgf:BC1003_0842 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004227249.1 KEGG: bmn:BMA10247_A2177 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF879; protein of unknown function DUF1305 YP_004227250.1 KEGG: bph:Bphy_5197 type VI secretion system Vgr family protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Protein of unknown function DUF2345 YP_004227251.1 PFAM: Peptidase M23; KEGG: cti:RALTA_B0297 conserved hypothetical protein; chitinase YP_004227252.1 KEGG: bfu:BC1G_04882 hypothetical protein YP_004227253.1 KEGG: bpy:Bphyt_6608 hypothetical protein YP_004227254.1 PFAM: hypothetical protein; KEGG: bgl:bglu_2g10990 PaaR YP_004227255.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: bgf:BC1003_0843 cobalamin (vitamin B12) biosynthesis CbiX protein YP_004227256.1 PFAM: permease YjgP/YjgQ family protein; KEGG: bgf:BC1003_0844 permease YjgP/YjgQ family protein YP_004227257.1 PFAM: permease YjgP/YjgQ family protein; KEGG: bgf:BC1003_0845 permease YjgP/YjgQ family protein YP_004227258.1 KEGG: bgf:BC1003_0846 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_004227259.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: bgf:BC1003_0847 DNA polymerase III chi subunit HolC YP_004227260.1 PFAM: Protein of unknown function DUF2486; KEGG: bgf:BC1003_0848 hypothetical protein YP_004227261.1 PFAM: cytochrome c class I; KEGG: bgf:BC1003_0849 cytochrome c class I YP_004227262.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: bgf:BC1003_0850 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004227263.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0851 LysR family transcriptional regulator YP_004227264.1 KEGG: bgf:BC1003_0852 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_004227265.1 PFAM: protein of unknown function DUF541; KEGG: bgf:BC1003_0853 hypothetical protein YP_004227266.1 PFAM: protein of unknown function DUF55; KEGG: bgf:BC1003_0854 hypothetical protein YP_004227267.1 PFAM: protein of unknown function DUF710; KEGG: bgf:BC1003_0855 hypothetical protein YP_004227268.1 KEGG: bgf:BC1003_0856 hypothetical protein YP_004227269.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bgf:BC1003_0857 TonB-dependent receptor YP_004227270.1 PFAM: transport system permease protein; KEGG: bgf:BC1003_0858 transport system permease YP_004227271.1 KEGG: bgf:BC1003_0859 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227272.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: bgf:BC1003_0860 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_004227273.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: bgf:BC1003_0861 cobalamin-5-phosphate synthase CobS YP_004227274.1 TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; KEGG: bgf:BC1003_0862 alpha-ribazole phosphatase; SMART: Phosphoglycerate mutase YP_004227275.1 PFAM: periplasmic binding protein; KEGG: bgf:BC1003_0863 periplasmic-binding protein YP_004227276.1 KEGG: bgf:BC1003_0864 L-threonine-O-3-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II YP_004227277.1 KEGG: bgf:BC1003_0865 cobalamin biosynthesis protein CobD; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB YP_004227278.1 KEGG: bgf:BC1003_0866 adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein YP_004227279.1 KEGG: bgf:BC1003_0867 cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_004227280.1 PFAM: DoxX family protein; KEGG: bpy:Bphyt_1006 DoxX family protein YP_004227281.1 PFAM: thioesterase superfamily protein; KEGG: bgf:BC1003_0868 thioesterase superfamily protein YP_004227282.1 KEGG: bgf:BC1003_0869 cobyrinic acid ac-diamide synthase YP_004227283.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: bgf:BC1003_0870 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_004227284.1 KEGG: bgf:BC1003_0871 pantoate/beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase YP_004227285.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bgf:BC1003_0872 chromosome segregation and condensation protein ScpA YP_004227286.1 PFAM: Protein of unknown function DUF3460; KEGG: bgf:BC1003_0873 hypothetical protein YP_004227287.1 PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: bgf:BC1003_0874 surface antigen (D15) YP_004227288.1 PFAM: protein of unknown function DUF490; KEGG: bgf:BC1003_0875 hypothetical protein YP_004227289.1 KEGG: bgf:BC1003_0876 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit YP_004227290.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_0877 OmpA/MotB domain-containing protein YP_004227291.1 PFAM: ATPase-like, ParA/MinD; KEGG: bgf:BC1003_0878 ATPase-like, ParA/MinD YP_004227292.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: bpy:Bphyt_1018 superoxide dismutase copper/zinc binding YP_004227293.1 KEGG: bgf:BC1003_0880 deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase YP_004227294.1 KEGG: bgf:BC1003_0881 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_004227295.1 KEGG: bgf:BC1003_0882 hypothetical protein YP_004227296.1 PFAM: Bestrophin-like; KEGG: bgf:BC1003_0883 hypothetical protein YP_004227297.1 TIGRFAM: glucokinase; KEGG: bgf:BC1003_0884 glucokinase; PFAM: Glucokinase; sugar isomerase (SIS); helix-turn-helix protein RpiR YP_004227298.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: bgf:BC1003_0885 6-phosphogluconolactonase YP_004227299.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: bgf:BC1003_0886 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_004227300.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_0887 extracellular solute-binding protein family 1 YP_004227301.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_0888 binding-protein-dependent transport systems inner membrane component YP_004227302.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_0889 binding-protein-dependent transport systems inner membrane component YP_004227303.1 KEGG: bgf:BC1003_0890 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227304.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0891 LysR family transcriptional regulator YP_004227305.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_0892 glutathione S-transferase YP_004227306.1 PFAM: Uncharacterised protein family UPF0126; KEGG: bgf:BC1003_0893 hypothetical protein YP_004227307.1 KEGG: bgf:BC1003_0894 Smr protein/MutS2; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_004227308.1 KEGG: bgf:BC1003_0895 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004227310.1 KEGG: bgf:BC1003_0896 cell division protein FtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: DNA translocase ftsK gamma; ATPase AAA YP_004227311.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bgf:BC1003_0897 outer membrane lipoprotein carrier protein LolA YP_004227312.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1040 transcriptional regulator, LysR family YP_004227313.1 KEGG: bgf:BC1003_0899 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_004227314.1 KEGG: bxe:Bxe_A3437 nucleobase/cation symporter, (NCS1) family; TIGRFAM: hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines uracil thiamine allantoin YP_004227315.1 KEGG: bgf:BC1003_0901 ATPase AAA; PFAM: MgsA AAA+ ATPase-like; ATPase AAA central domain protein; SMART: ATPase AAA YP_004227316.1 TIGRFAM: seryl-tRNA synthetase; KEGG: bgf:BC1003_0902 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_004227317.1 KEGG: bxe:Bxe_A3427 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_004227318.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_0904 GCN5-related N-acetyltransferase YP_004227319.1 KEGG: bgf:BC1003_0905 septum site-determining protein MinC; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC YP_004227320.1 TIGRFAM: septum site-determining protein MinD; KEGG: bgf:BC1003_0906 septum site-determining protein MinD YP_004227321.1 KEGG: bgf:BC1003_0907 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE YP_004227322.1 PFAM: Cl- channel voltage-gated family protein; KEGG: bgf:BC1003_0908 Cl-channel voltage-gated family protein YP_004227323.1 KEGG: bgf:BC1003_0909 lipopolysaccharide heptosyltransferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9 YP_004227324.1 KEGG: bgf:BC1003_0910 hypothetical protein YP_004227325.1 KEGG: bgf:BC1003_0911 hypothetical protein YP_004227326.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0912 major facilitator superfamily protein YP_004227327.1 KEGG: bgf:BC1003_0913 TonB protein YP_004227328.1 KEGG: bgf:BC1003_0914 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_004227329.1 SMART: helix-turn-helix domain protein; KEGG: bgf:BC1003_0915 helix-turn-helix domain-containing protein YP_004227330.1 PFAM: methyltransferase type 11; KEGG: bgf:BC1003_0916 methyltransferase type 11 YP_004227331.1 KEGG: bge:BC1002_3242 hypothetical protein YP_004227332.1 KEGG: bvi:Bcep1808_2389 hypothetical protein YP_004227333.1 KEGG: bcm:Bcenmc03_5197 hypothetical protein YP_004227334.1 KEGG: bgf:BC1003_0917 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region YP_004227335.1 KEGG: bpy:Bphyt_1069 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_004227336.1 PFAM: protein of unknown function DUF513 hemX; Uroporphyrinogen III synthase HEM4; KEGG: bgf:BC1003_0919 hypothetical protein YP_004227337.1 PFAM: HemY domain protein; KEGG: bgf:BC1003_0920 HemY domain-containing protein YP_004227338.1 KEGG: bxe:Bxe_B0259 hypothetical protein YP_004227339.1 KEGG: cai:Caci_3376 peptidase S53 propeptide YP_004227340.1 KEGG: gem:GM21_3345 methyl-accepting chemotaxis sensory transducer YP_004227341.1 KEGG: sai:Saci_0051 DNA double-strand break repair rad50 ATPase YP_004227342.1 KEGG: cpy:Cphy_0270 hypothetical protein; PFAM: Lambda NinG family protein; SMART: HNH nuclease YP_004227343.1 KEGG: rcu:RCOM_0270120 sphingosine-1-phosphate phosphohydrolase, PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004227344.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ctt:CtCNB1_3152 transcriptional regulator, LysR family YP_004227345.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bts:Btus_0971 4-oxalocrotonate tautomerase family enzyme YP_004227346.1 KEGG: bcj:BCAM2124 2-keto-4-pentenoate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004227347.1 KEGG: bcj:BCAM2123 4-oxalocrotonate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004227348.1 SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: bcj:BCAM2122 acetaldehyde dehydrogenase; PFAM: Acetaldehyde dehydrogenase ; Semialdehyde dehydrogenase NAD - binding YP_004227349.1 KEGG: bcj:BCAM2121 4-hydroxy-2-ketovalerate aldolase; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein YP_004227350.1 PFAM: amino acid permease-associated region; KEGG: bcm:Bcenmc03_5379 amino acid permease-associated region YP_004227351.1 KEGG: bam:Bamb_5597 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase YP_004227352.1 KEGG: bmj:BMULJ_05839 ACR3 family arsenite transporter; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter YP_004227353.1 KEGG: bpy:Bphyt_5765 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004227354.1 KEGG: bpy:Bphyt_5763 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004227355.1 KEGG: ebi:EbC_pEb10200220 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004227356.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rme:Rmet_5102 alcohol dehydrogenase YP_004227357.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rlg:Rleg_1013 short-chain dehydrogenase/reductase SDR YP_004227358.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bch:Bcen2424_5911 short-chain dehydrogenase/reductase SDR YP_004227359.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcm:Bcenmc03_6414 LysR family transcriptional regulator YP_004227360.1 KEGG: bcm:Bcenmc03_6413 NmrA family protein YP_004227361.1 PFAM: Molybdenum cofactor biosynthesis protein F; KEGG: bte:BTH_II1540 hypothetical protein YP_004227362.1 KEGG: bte:BTH_II1538 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; GAF domain protein; SMART: regulatory protein LuxR; GAF domain protein YP_004227363.1 PFAM: Aldehyde Dehydrogenase; KEGG: bte:BTH_II1537 phenylacetaldehyde dehydrogenase YP_004227364.1 KEGG: bpd:BURPS668_A1278 AraC family transcription regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004227365.1 PFAM: amino acid permease-associated region; KEGG: pfs:PFLU3094 transmembrane permease protein YP_004227366.1 PFAM: porin Gram-negative type; KEGG: bmn:BMA10247_A0948 outer membrane porin YP_004227367.1 PFAM: FAD dependent oxidoreductase; KEGG: pau:PA14_34680 oxidoreductase YP_004227368.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: pag:PLES_29861 enzyme of the cupin superfamily YP_004227369.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0923 major facilitator superfamily protein YP_004227370.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_0924 short-chain dehydrogenase/reductase SDR YP_004227371.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_0925 aldehyde dehydrogenase YP_004227372.1 KEGG: bgf:BC1003_0926 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase YP_004227373.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bgf:BC1003_0927 hypothetical protein YP_004227374.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: bgf:BC1003_0928 excinuclease ABC subunit C domain-containing protein YP_004227375.1 PFAM: protein of unknown function DUF482; KEGG: bgf:BC1003_0929 hypothetical protein YP_004227376.1 KEGG: bgf:BC1003_0930 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004227377.1 PFAM: nitrogen regulatory protein P-II; KEGG: bgf:BC1003_0931 nitrogen regulatory protein P-II YP_004227378.1 KEGG: bgf:BC1003_0932 OmpC family outer membrane porin YP_004227379.1 KEGG: bgf:BC1003_0933 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227380.1 KEGG: bgf:BC1003_0934 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004227381.1 KEGG: bgf:BC1003_0935 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004227382.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bgf:BC1003_0936 cationic amino acid ABC transporter periplasmic-binding protein; SMART: extracellular solute-binding protein family 3 YP_004227383.1 PFAM: Pirin domain protein; KEGG: bgf:BC1003_0937 pirin YP_004227384.1 KEGG: bgf:BC1003_0938 hypothetical protein YP_004227385.1 KEGG: bgf:BC1003_0939 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004227386.1 KEGG: bgf:BC1003_0940 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004227387.1 KEGG: bgf:BC1003_0941 hypothetical protein YP_004227388.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bgf:BC1003_0942 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004227389.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_0943 binding-protein-dependent transport systems inner membrane component YP_004227390.1 KEGG: bgf:BC1003_0944 ABC nitrate/sulfonate/bicarbonate family transporter ATPase subunit; PFAM: ABC nitrate/sulphonate/bicarbonate family transporter, ATPase subunit; ABC transporter related; SMART: ATPase AAA YP_004227391.1 KEGG: bgf:BC1003_0945 hypothetical protein YP_004227392.1 KEGG: bgf:BC1003_0946 hypothetical protein YP_004227393.1 KEGG: bgf:BC1003_0947 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_004227394.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bgf:BC1003_0948 hypothetical protein YP_004227395.1 KEGG: bgf:BC1003_0949 hypothetical protein YP_004227396.1 KEGG: bgf:BC1003_0950 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_004227397.1 KEGG: bgf:BC1003_0951 hypothetical protein YP_004227398.1 KEGG: bgf:BC1003_0952 hypothetical protein YP_004227399.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: bgf:BC1003_0953 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_004227400.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_0954 major facilitator superfamily protein YP_004227401.1 PFAM: PEBP family protein; KEGG: bgf:BC1003_0955 PEBP family protein YP_004227402.1 KEGG: bpy:Bphyt_1142 DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr YP_004227403.1 KEGG: bgf:BC1003_0957 hypothetical protein YP_004227404.1 KEGG: bgf:BC1003_0958 hypothetical protein YP_004227405.1 KEGG: bgf:BC1003_0959 hypothetical protein YP_004227406.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0960 LysR family transcriptional regulator YP_004227407.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0961 LysR family transcriptional regulator YP_004227408.1 KEGG: bgf:BC1003_2940 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227409.1 KEGG: bgf:BC1003_0962 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004227410.1 KEGG: bgf:BC1003_0963 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004227411.1 KEGG: bgf:BC1003_0964 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004227412.1 KEGG: bgf:BC1003_0965 hypothetical protein YP_004227413.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0966 LysR family transcriptional regulator YP_004227414.1 PFAM: protein of unknown function DUF1234; KEGG: bgf:BC1003_0967 hydrolase or acyltransferase YP_004227415.1 TIGRFAM: DNA-cytosine methyltransferase; KEGG: bgf:BC1003_0968 DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase YP_004227416.1 KEGG: bgf:BC1003_0969 hypothetical protein YP_004227417.1 PFAM: CsbD family protein; KEGG: bgf:BC1003_0970 CsbD family protein YP_004227418.1 KEGG: bgf:BC1003_0971 hypothetical protein YP_004227419.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_0972 glutathione S-transferase YP_004227420.1 PFAM: protein of unknown function DUF1275; KEGG: bgf:BC1003_0973 hypothetical protein YP_004227421.1 KEGG: bpy:Bphyt_1152 integrase family protein YP_004227422.1 KEGG: bid:Bind_2064 hypothetical protein YP_004227423.1 KEGG: slo:Shew_2745 hypothetical protein YP_004227424.1 KEGG: ftm:FTM_0877 hypothetical protein YP_004227425.1 PFAM: Protein of unknown function DUF2279, periplasmic lipoprotein; KEGG: bgf:BC1003_0985 hypothetical protein YP_004227426.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bgf:BC1003_0986 rubredoxin-type Fe(Cys)4 protein YP_004227427.1 KEGG: bgf:BC1003_0987 hypothetical protein YP_004227428.1 KEGG: bgf:BC1003_0988 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227429.1 PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein; KEGG: bgf:BC1003_0989 DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_004227430.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: bgf:BC1003_0990 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004227431.1 KEGG: bgf:BC1003_0991 hypothetical protein YP_004227432.1 PFAM: Chromate transporter; KEGG: bgf:BC1003_0992 chromate transporter YP_004227433.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bgf:BC1003_0993 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_004227434.1 KEGG: bgf:BC1003_0994 phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_004227435.1 PFAM: Endoribonuclease L-PSP; KEGG: bgf:BC1003_0995 endoribonuclease L-PSP YP_004227436.1 PFAM: aminotransferase class I and II; KEGG: bxe:Bxe_A3332 aminotransferase YP_004227437.1 KEGG: bgf:BC1003_0997 hypothetical protein YP_004227438.1 KEGG: bgf:BC1003_0998 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004227439.1 KEGG: bgf:BC1003_0999 heat shock protein HSP90-like protein; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004227440.1 KEGG: bgf:BC1003_1000 hypothetical protein YP_004227441.1 KEGG: bgf:BC1003_1001 hypothetical protein YP_004227442.1 SMART: Tetratricopeptide repeat; KEGG: bgf:BC1003_1002 tetratricopeptide repeat-containing protein YP_004227443.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_1003 OmpA/MotB domain-containing protein YP_004227444.1 KEGG: bgf:BC1003_1004 chorismate lyase; PFAM: Chorismate lyase YP_004227445.1 PFAM: uracil-DNA glycosylase; KEGG: bgf:BC1003_1005 hypothetical protein YP_004227446.1 KEGG: bgf:BC1003_1006 hypothetical protein YP_004227447.1 PFAM: Protein of unknown function DUF3311; KEGG: bgf:BC1003_1007 hypothetical protein YP_004227448.1 KEGG: bgf:BC1003_1008 Na+/solute symporter YP_004227449.1 manually curated; KEGG: bgf:BC1003_1009 hypothetical protein YP_004227450.1 KEGG: bgf:BC1003_1010 glyoxalase/bleomycin resistance protein/dioxygenase YP_004227451.1 KEGG: bgf:BC1003_1011 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase YP_004227452.1 KEGG: bgf:BC1003_1012 benzoate transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein YP_004227453.1 PFAM: VWA containing CoxE family protein; KEGG: bgf:BC1003_1013 VWA containing CoxE family protein YP_004227454.1 KEGG: bgf:BC1003_1014 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_004227455.1 PFAM: cytochrome c class I; KEGG: bgf:BC1003_1015 cytochrome c class I YP_004227456.1 PFAM: cytochrome c class I; KEGG: bgf:BC1003_1016 cytochrome c class I YP_004227457.1 PFAM: Domain of unknown function DUF1841; KEGG: bgf:BC1003_1017 hypothetical protein YP_004227458.1 SMART: HhH-GPD family protein; Helix-hairpin-helix DNA-binding class 1; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: bgf:BC1003_1018 endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif YP_004227459.1 KEGG: bgf:BC1003_1019 electron transport complex, RnfABCDGE type subunit B; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein YP_004227460.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_1020 TetR family transcriptional regulator YP_004227461.1 KEGG: bgf:BC1003_1021 polyhydroxyalkanoate depolymerase, intracellular; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_004227462.1 PFAM: glycoside hydrolase 15-related; KEGG: bgf:BC1003_1022 glycoside hydrolase 15-related protein YP_004227463.1 KEGG: bgf:BC1003_1023 hypothetical protein YP_004227464.1 PFAM: Protein of unknown function DUF3096; KEGG: bgf:BC1003_1024 hypothetical protein YP_004227465.1 KEGG: bgf:BC1003_1025 6-phosphogluconolactonase YP_004227466.1 KEGG: bxe:Bxe_A3303 DNA translocase FtsK; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: DNA translocase ftsK gamma; ATPase AAA YP_004227467.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bgf:BC1003_1027 hypothetical protein YP_004227468.1 TIGRFAM: phosphoribosylglycinamide formyltransferase 2; KEGG: bgf:BC1003_1028 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_004227469.1 KEGG: bgf:BC1003_1029 hypothetical protein YP_004227470.1 manually curated; KEGG: bmj:BMULJ_05821 IS402 transposase YP_004227471.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: bgf:BC1003_1031 thiamine pyrophosphate TPP-binding domain-containing protein YP_004227472.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_1032 aldehyde dehydrogenase YP_004227473.1 KEGG: bgf:BC1003_1033 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004227474.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: bgf:BC1003_1034 glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain-containing protein YP_004227475.1 KEGG: bgf:BC1003_1035 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004227476.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: bgf:BC1003_1037 DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; nucleic acid binding OB-fold tRNA/helicase-type; PHP domain protein YP_004227477.1 PFAM: glycosyl transferase family 2; KEGG: bpy:Bphyt_1254 glycosyl transferase family 2 YP_004227478.1 TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: bgf:BC1003_1039 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; SMART: ATPase AAA YP_004227479.1 PFAM: glycosyl transferase family 2; KEGG: bge:BC1002_0884 glycosyl transferase family 2 YP_004227480.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_1040 glycosyl transferase family 2 YP_004227481.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1041 glycosyl transferase group 1 YP_004227482.1 PFAM: O-antigen polymerase; KEGG: bgf:BC1003_1042 O-antigen polymerase YP_004227483.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_1043 glycosyl transferase family 2 YP_004227484.1 KEGG: bgf:BC1003_1044 hypothetical protein YP_004227485.1 PFAM: protein of unknown function DUF1486; KEGG: bpy:Bphyt_1261 protein of unknown function DUF1486 YP_004227486.1 PFAM: exonuclease RdgC; KEGG: bgf:BC1003_1045 exonuclease RdgC YP_004227487.1 KEGG: bph:Bphy_0023 type VI secretion system Vgr family protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Protein of unknown function DUF2345 YP_004227488.1 KEGG: act:ACLA_079920 C6 finger domain protein YP_004227489.1 manually curated; KEGG: pfo:Pfl01_3894 hypothetical protein YP_004227490.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bgf:BC1003_1046 glyoxalase/bleomycin resistance protein/dioxygenase YP_004227491.1 PFAM: NLP/P60 protein; KEGG: bgf:BC1003_1047 NLP/P60 protein YP_004227492.1 PFAM: TOBE domain-containing protein; KEGG: bgf:BC1003_1048 TOBE domain-containing protein YP_004227493.1 KEGG: bgf:BC1003_1049 sensor protein; PFAM: GAF domain protein; SMART: GAF domain protein YP_004227494.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; GGDEF domain containing protein; KEGG: bpy:Bphyt_1278 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_004227495.1 PFAM: integrase family protein; KEGG: bph:Bphy_3232 integrase family protein YP_004227496.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis protein CheB; ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; MCP methyltransferase CheR-type; histidine kinase A domain protein; KEGG: bcj:BCAS0632 hybrid two-component system kinase-response regulator protein; SMART: MCP methyltransferase CheR-type; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004227497.1 KEGG: mno:Mnod_3757 hypothetical protein YP_004227498.1 KEGG: bcj:BCAS0631 CheB family methylesterase; PFAM: chemotaxis protein CheB YP_004227499.1 PFAM: Integrase catalytic region; KEGG: bcm:Bcenmc03_1110 integrase catalytic region YP_004227500.1 KEGG: ter:Tery_2450 hypothetical protein YP_004227501.1 manually curated; KEGG: bmj:BMULJ_05821 IS402 transposase YP_004227502.1 KEGG: bgl:bglu_2g15710 transposase IS3/IS911; manually curated; PFAM: transposase IS3/IS911 family protein YP_004227503.1 manually curated; KEGG: bmj:BMULJ_05821 IS402 transposase YP_004227504.1 KEGG: caa:Caka_1411 outer membrane autotransporter barrel domain protein YP_004227505.1 KEGG: sit:TM1040_1655 hypothetical protein YP_004227506.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bam:Bamb_5001 alcohol dehydrogenase YP_004227507.1 PFAM: major facilitator superfamily MFS_1; KEGG: bam:Bamb_5002 major facilitator transporter YP_004227508.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bcj:BCAM0037 2,4'-dihydroxyacetophenone dioxygenase YP_004227509.1 KEGG: bcj:BCAM0038 AraC family regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004227510.1 KEGG: bcm:Bcenmc03_4499 outer membrane protein (porin) YP_004227511.1 PFAM: transposase IS3/IS911 family protein; KEGG: bgl:bglu_1p0420 transposase YP_004227512.1 PFAM: Integrase catalytic region; KEGG: bgl:bglu_2g04690 integrase, catalytic region YP_004227513.1 KEGG: bgf:BC1003_5045 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004227514.1 PFAM: protein of unknown function DUF849; KEGG: bgf:BC1003_5044 hypothetical protein YP_004227515.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5043 major facilitator superfamily protein YP_004227516.1 PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; KEGG: swi:Swit_2303 gluconolactonase YP_004227517.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5042 short-chain dehydrogenase/reductase SDR YP_004227518.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5041 short-chain dehydrogenase/reductase SDR YP_004227519.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bcj:BCAM0770 hypothetical protein YP_004227520.1 KEGG: bxe:Bxe_B0590 ABC sugar transporter, periplasmic ligand binding protein YP_004227521.1 KEGG: rle:RL1997 ATP-binding component of ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227522.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B0591 ABC sugar transporter, inner membrane subunit YP_004227523.1 PFAM: porin Gram-negative type; KEGG: bam:Bamb_6314 porin YP_004227524.1 KEGG: aav:Aave_2030 ModE family transcriptional regulator YP_004227525.1 KEGG: bxe:Bxe_A2575 hypothetical protein YP_004227526.1 KEGG: bxe:Bxe_A2574 hypothetical protein YP_004227527.1 KEGG: bxe:Bxe_A2573 hypothetical protein YP_004227528.1 KEGG: bpy:Bphyt_0241 hypothetical protein YP_004227529.1 KEGG: bxe:Bxe_A2572 ParB family protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_004227530.1 KEGG: bxe:Bxe_A2571 F plasmid gene 32-like protein YP_004227532.1 KEGG: bge:BC1002_7137 hypothetical protein YP_004227533.1 PFAM: KAP P-loop domain protein; KEGG: reu:Reut_A2201 kap P-loop YP_004227534.1 PFAM: Protein of unknown function DUF3732; KEGG: sfu:Sfum_2023 hypothetical protein YP_004227535.1 KEGG: sfu:Sfum_2024 hypothetical protein YP_004227536.1 manually curated; KEGG: bmj:BMULJ_05821 IS402 transposase YP_004227537.1 PFAM: integrase family protein; KEGG: bps:BPSL1157 phage integrase YP_004227538.1 KEGG: bgf:BC1003_2370 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_004227539.1 KEGG: bgf:BC1003_2369 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004227540.1 PFAM: protein of unknown function DUF163; KEGG: bgf:BC1003_2368 hypothetical protein YP_004227541.1 manually curated; TIGRFAM: iojap-like protein; KEGG: bgf:BC1003_2367 iojap-like protein; PFAM: Iojap-related protein YP_004227542.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: bgf:BC1003_2366 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_004227543.1 KEGG: bgf:BC1003_2365 coproporphyrinogen oxidase; PFAM: coproporphyrinogen III oxidase YP_004227544.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: bgf:BC1003_2364 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_004227545.1 PFAM: protein of unknown function DUF28; KEGG: bgf:BC1003_2363 hypothetical protein YP_004227546.1 TIGRFAM: uracil phosphoribosyltransferase; KEGG: bgf:BC1003_2362 uracil phosphoribosyltransferase YP_004227547.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_2361 short-chain dehydrogenase/reductase SDR YP_004227548.1 SMART: MGS domain protein; TIGRFAM: methylglyoxal synthase; KEGG: bgf:BC1003_2360 methylglyoxal synthase; PFAM: MGS domain protein YP_004227549.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bgf:BC1003_2359 alcohol dehydrogenase zinc-binding domain-containing protein YP_004227550.1 KEGG: bgf:BC1003_2358 hypothetical protein YP_004227551.1 KEGG: bgf:BC1003_2357 K+-transporting ATPase subunit F; TIGRFAM: K+-transporting ATPase, F subunit; PFAM: K+transporting ATPase F subunit YP_004227552.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: bgf:BC1003_2356 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit YP_004227553.1 KEGG: bge:BC1002_0920 K+-transporting ATPase, B subunit; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004227554.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: bpy:Bphyt_1310 potassium-transporting ATPase subunit C; PFAM: K transporting ATPase KdpC subunit YP_004227555.1 KEGG: bgf:BC1003_2353 osmosensitive K channel signal transduction histidine kinase; PFAM: Osmosensitive K channel His kinase sensor; ATP-binding region ATPase domain protein; UspA domain-containing protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein YP_004227556.1 KEGG: bgf:BC1003_2352 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004227557.1 PFAM: small multidrug resistance protein; KEGG: bgf:BC1003_2351 small multidrug resistance protein YP_004227558.1 KEGG: bgf:BC1003_2350 transmembrane protein YP_004227559.1 PFAM: protein of unknown function DUF214; KEGG: bgf:BC1003_2349 hypothetical protein YP_004227560.1 PFAM: globin; KEGG: bgf:BC1003_2348 globin YP_004227561.1 PFAM: protein of unknown function DUF924; KEGG: bgf:BC1003_2347 hypothetical protein YP_004227562.1 KEGG: bgf:BC1003_2346 hypothetical protein YP_004227563.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_2345 short-chain dehydrogenase/reductase SDR YP_004227564.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: bgf:BC1003_2344 hypothetical protein YP_004227565.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_2343 TetR family transcriptional regulator YP_004227566.1 PFAM: diacylglycerol kinase; KEGG: bgf:BC1003_2342 diacylglycerol kinase YP_004227567.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_2341 glycosyl transferase group 1 YP_004227568.1 PFAM: metallophosphoesterase; KEGG: bpy:Bphyt_1323 metallophosphoesterase YP_004227569.1 PFAM: RDD domain containing protein; KEGG: bgf:BC1003_2339 RDD domain containing protein YP_004227570.1 KEGG: bgf:BC1003_2338 transmembrane protein YP_004227571.1 PFAM: Protein of unknown function DUF3619; KEGG: bgf:BC1003_2337 hypothetical protein YP_004227572.1 KEGG: bgf:BC1003_2336 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2 YP_004227573.1 KEGG: bgf:BC1003_2335 acetolactate synthase large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004227574.1 KEGG: bgf:BC1003_2334 acetolactate synthase small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_004227575.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: bgf:BC1003_2333 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase YP_004227576.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; HNH endonuclease; KEGG: bph:Bphy_0447 RNA-directed DNA polymerase; SMART: HNH nuclease YP_004227577.1 TIGRFAM: phosphatidylserine decarboxylase related protein; KEGG: bgf:BC1003_2332 phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related YP_004227578.1 KEGG: bgf:BC1003_2331 CDP-diacylglycerol/serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004227579.1 KEGG: bgf:BC1003_2330 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_004227580.1 PFAM: sulphate transporter; KEGG: bgf:BC1003_2329 sulphate transporter YP_004227581.1 KEGG: bgf:BC1003_2328 carbonate dehydratase; PFAM: carbonic anhydrase YP_004227582.1 KEGG: bxe:Bxe_A3222 lipoprotein YP_004227583.1 KEGG: bgf:BC1003_2326 extracellular ligand-binding receptor YP_004227584.1 KEGG: bgf:BC1003_2325 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_004227585.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: bgf:BC1003_2324 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; Polynucleotide phosphorylase, phosphorolytic RNA-binding YP_004227586.1 KEGG: bxe:Bxe_A3217 NADPH quinone oxidoreductase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004227587.1 PFAM: triosephosphate isomerase; manually curated; KEGG: bgf:BC1003_2322 triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_004227588.1 KEGG: bgf:BC1003_2321 preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004227589.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: bxe:Bxe_A3214 NADH dehydrogenase subunit A YP_004227590.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: bgf:BC1003_2319 NADH-quinone oxidoreductase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_004227591.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; KEGG: bgf:BC1003_2318 NADH (or F420H2) dehydrogenase subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_004227592.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: bgf:BC1003_2317 NADH dehydrogenase I subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_004227593.1 KEGG: bgf:BC1003_2316 NADH-quinone oxidoreductase subunit E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_004227594.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: bgf:BC1003_2315 NADH-quinone oxidoreductase subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain YP_004227595.1 KEGG: bgf:BC1003_2314 NADH-quinone oxidoreductase, chain G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase; ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding YP_004227596.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: bgf:BC1003_2313 respiratory-chain NADH dehydrogenase subunit 1 YP_004227597.1 KEGG: bgf:BC1003_2312 NADH-quinone oxidoreductase, chain I; TIGRFAM: NADH-quinone oxidoreductase, chain I YP_004227598.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: bgf:BC1003_2311 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_004227599.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: bgf:BC1003_2310 NADH-ubiquinone oxidoreductase chain 4L YP_004227600.1 KEGG: bgf:BC1003_2309 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/ubiquinone/plastoquinone (complex I); NADH-ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_004227601.1 KEGG: bgf:BC1003_2308 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/ubiquinone/plastoquinone (complex I); NADH:ubiquinone oxidoreductase, chain 4-like YP_004227602.1 KEGG: bgf:BC1003_2307 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/ubiquinone/plastoquinone (complex I) YP_004227603.1 PFAM: Uncharacterised conserved protein UCP019883, membrane; KEGG: bgf:BC1003_2306 hypothetical protein YP_004227604.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_2305 NUDIX hydrolase YP_004227605.1 manually curated; KEGG: bgf:BC1003_2304 hypothetical protein YP_004227606.1 KEGG: bgf:BC1003_2303 prophage CP4-57 regulatory YP_004227607.1 PFAM: protein of unknown function DUF1178; KEGG: bpy:Bphyt_1361 protein of unknown function DUF1178 YP_004227608.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_2301 acyl-CoA dehydrogenase domain-containing protein YP_004227609.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_2300 acyl-CoA dehydrogenase domain-containing protein YP_004227610.1 PFAM: MaoC domain protein dehydratase; KEGG: bgf:BC1003_2299 MaoC domain-containing protein dehydratase YP_004227611.1 KEGG: bgf:BC1003_2298 enoyl-CoA hydratase; PFAM: MaoC domain protein dehydratase YP_004227612.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_2297 glutathione S-transferase YP_004227613.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_2296 acyl-CoA dehydrogenase domain-containing protein YP_004227614.1 PFAM: aminoglycoside phosphotransferase; KEGG: bgf:BC1003_2295 aminoglycoside phosphotransferase YP_004227615.1 KEGG: bgf:BC1003_2294 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase YP_004227616.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_2293 enoyl-CoA hydratase/isomerase YP_004227617.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_2292 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein YP_004227618.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_2291 glutathione S-transferase YP_004227619.1 PFAM: aminotransferase class I and II; KEGG: bgf:BC1003_2290 class I/II aminotransferase YP_004227620.1 KEGG: bgf:BC1003_2289 hypothetical protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc YP_004227621.1 PFAM: protein of unknown function DUF328; KEGG: bgf:BC1003_2288 hypothetical protein YP_004227622.1 KEGG: bpy:Bphyt_1376 peptidase M14; PFAM: peptidase M14; SMART: peptidase M14 YP_004227623.1 KEGG: bgf:BC1003_2286 hypothetical protein YP_004227624.1 KEGG: bgf:BC1003_2285 hypothetical protein YP_004227625.1 KEGG: bgf:BC1003_2284 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR YP_004227626.1 PFAM: Protein of unknown function DUF2863; KEGG: bgf:BC1003_2283 hypothetical protein YP_004227627.1 PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_A3174 hypothetical protein YP_004227628.1 KEGG: bpy:Bphyt_1382 hypothetical protein YP_004227629.1 KEGG: bpy:Bphyt_1383 hypothetical protein; manually curated; PFAM: UMUC domain protein DNA-repair protein YP_004227630.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: bxe:Bxe_A3164 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; nucleic acid binding OB-fold tRNA/helicase-type; PHP domain protein YP_004227631.1 PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: bgf:BC1003_2281 dTDP-4-dehydrorhamnose reductase YP_004227632.1 manually curated; TIGRFAM: copper ion binding protein; KEGG: bgf:BC1003_2280 heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein YP_004227633.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: bgf:BC1003_2279 MerR family transcriptional regulator; SMART: regulatory protein MerR YP_004227634.1 PFAM: Protein of unknown function DUF3563; KEGG: bgf:BC1003_2278 hypothetical protein YP_004227635.1 KEGG: alv:Alvin_2992 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_004227636.1 KEGG: bgf:BC1003_2276 NMT1/THI5 like domain-containing protein YP_004227637.1 PFAM: protein of unknown function DUF519; KEGG: bgf:BC1003_2275 hypothetical protein YP_004227638.1 PFAM: aldo/keto reductase; KEGG: bgf:BC1003_2274 aldo/keto reductase YP_004227639.1 KEGG: bgf:BC1003_2273 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_004227640.1 PFAM: Protein of unknown function DUF3734; Patatin; KEGG: bgf:BC1003_2272 patatin YP_004227641.1 PFAM: aminotransferase class I and II; KEGG: bgf:BC1003_2271 class I/II aminotransferase YP_004227642.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; KEGG: bgf:BC1003_2270 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein YP_004227643.1 PFAM: Ferrous iron transport protein; KEGG: bgf:BC1003_2269 ferrous iron transport protein YP_004227644.1 KEGG: bgf:BC1003_2268 hypothetical protein YP_004227645.1 PFAM: iron permease FTR1; KEGG: bxe:Bxe_A3150 oxidase-dependent Fe2+ transporter, (OFeT)family, FTR1-like YP_004227646.1 KEGG: bgf:BC1003_2266 nitrogen fixation protein VnfA YP_004227647.1 PFAM: Hemin uptake protein hemP; KEGG: bgf:BC1003_2265 hemin uptake protein HemP YP_004227648.1 PFAM: Domain of unknown function DUF1857; KEGG: bgf:BC1003_2264 hypothetical protein YP_004227649.1 PFAM: OsmC family protein; KEGG: bgf:BC1003_2263 OsmC family protein YP_004227650.1 PFAM: Pirin domain protein; KEGG: bgf:BC1003_2262 pirin YP_004227651.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_2261 LysR family transcriptional regulator YP_004227652.1 KEGG: bgf:BC1003_2260 hypothetical protein YP_004227653.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bgf:BC1003_2259 biopolymer transport protein ExbD/TolR YP_004227654.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bgf:BC1003_2258 MotA/TolQ/ExbB proton channel YP_004227655.1 KEGG: bgf:BC1003_2257 TonB family protein; TIGRFAM: TonB family protein; PFAM: TonB domain YP_004227656.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bgf:BC1003_2256 BFD domain-containing protein (2Fe-2S)-binding domain-containing protein YP_004227657.1 TIGRFAM: glutamate racemase; KEGG: bgf:BC1003_2255 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004227658.1 KEGG: bgf:BC1003_2254 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein YP_004227659.1 KEGG: bgf:BC1003_2253 hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region YP_004227660.1 PFAM: Uncharacterised protein family UPF0114; KEGG: bgf:BC1003_2252 hypothetical protein YP_004227661.1 KEGG: bgf:BC1003_2250 acetate/CoA ligase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004227662.1 TIGRFAM: solute symporter protein; KEGG: bgf:BC1003_2249 solute symporter protein YP_004227663.1 KEGG: bgf:BC1003_2248 sodium symporter protein; TIGRFAM: sodium symporter protein; PFAM: Na+/solute symporter YP_004227664.1 PFAM: integrase family protein; KEGG: mno:Mnod_5416 integrase family protein YP_004227665.1 KEGG: cai:Caci_6741 tetratricopeptide TPR_2 repeat protein YP_004227666.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: rcu:RCOM_1882520 hypothetical protein; SMART: helix-turn-helix domain protein YP_004227667.1 KEGG: bfu:BC1G_15803 hypothetical protein YP_004227668.1 KEGG: rha:RHA1_ro07025 hypothetical protein YP_004227669.1 KEGG: yen:YE2301 phage-related membrane protein YP_004227670.1 KEGG: ppf:Pput_3900 hypothetical protein YP_004227671.1 KEGG: reu:Reut_A3316 hypothetical protein YP_004227672.1 KEGG: bgf:BC1003_2129 hypothetical protein YP_004227673.1 KEGG: ure:UREG_04806 hypothetical protein YP_004227674.1 KEGG: bvi:Bcep1808_0444 resolvase; manually curated; PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein YP_004227675.1 KEGG: eat:EAT1b_2284 alpha amylase catalytic sub domain protein YP_004227676.1 KEGG: tcr:509701.10 trifunctional enzyme alpha subunit, mitochondrial precursor-like protein YP_004227677.1 KEGG: rsl:RPSI07_2644 hypothethical protein YP_004227678.1 KEGG: bxe:Bxe_A2441 recombinase, transposition resolvase, TnpR; PFAM: Resolvase domain; SMART: Resolvase domain YP_004227679.1 KEGG: bac:BamMC406_0410 type VI secretion system Vgr family protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Protein of unknown function DUF2345 YP_004227680.1 KEGG: rcu:RCOM_2141560 hypothetical protein YP_004227681.1 KEGG: bgf:BC1003_2243 hypothetical protein YP_004227682.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_5539 glutathione S-transferase YP_004227683.1 KEGG: bid:Bind_1827 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004227684.1 KEGG: bid:Bind_1828 NmrA family protein YP_004227685.1 KEGG: bgf:BC1003_1392 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA YP_004227686.1 KEGG: bgf:BC1003_1393 extracellular solute-binding protein family 3 YP_004227687.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_1394 binding-protein-dependent transport systems inner membrane component YP_004227688.1 KEGG: bgf:BC1003_1395 binding-protein-dependent transport systems inner membrane component; manually curated; PFAM: binding-protein-dependent transport systems inner membrane component YP_004227689.1 KEGG: bgf:BC1003_1396 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227690.1 KEGG: bgf:BC1003_1397 nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; PFAM: Luciferase-like, subgroup YP_004227691.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgl:bglu_2g15140 probable short-chain dehydrogenase YP_004227692.1 manually curated; PFAM: regulatory protein DeoR; KEGG: bgl:bglu_2g15150 transcriptional regulator, DeoR family protein; SMART: regulatory protein DeoR YP_004227693.1 KEGG: bgl:bglu_2g15160 hypothetical protein YP_004227694.1 PFAM: Na+/solute symporter; KEGG: bgl:bglu_2g15170 Na+ solute symporter YP_004227695.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bgl:bglu_2g15180 probable pyrodoxal phosphate biosynthesis protein; PFAM: pyridoxal phosphate biosynthetic protein PdxA; type III effector Hrp-dependent outers YP_004227696.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bgl:bglu_2g15190 iron-containing alcohol dehydrogenase YP_004227697.1 KEGG: bgl:bglu_2g15200 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004227698.1 PFAM: porin Gram-negative type; KEGG: bgl:bglu_2g15210 porin, gram-negative type YP_004227699.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1381 LysR family transcriptional regulator YP_004227700.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_1382 short-chain dehydrogenase/reductase SDR YP_004227701.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bge:BC1002_1113 short-chain dehydrogenase/reductase SDR YP_004227702.1 KEGG: bpy:Bphyt_4223 hypothetical protein YP_004227703.1 KEGG: bss:BSUW23_02035 hypothetical protein YP_004227704.1 KEGG: bgf:BC1003_2034 hypothetical protein YP_004227705.1 manually curated; KEGG: bpy:Bphyt_4224 hypothetical protein YP_004227706.1 KEGG: bge:BC1002_6207 hypothetical protein YP_004227707.1 KEGG: bge:BC1002_0430 hypothetical protein YP_004227708.1 KEGG: bge:BC1002_0431 hypothetical protein YP_004227709.1 KEGG: bge:BC1002_0426 hypothetical protein YP_004227710.1 KEGG: bgf:BC1003_4957 phosphoesterase PA-phosphatase related protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004227711.1 PFAM: beta-lactamase; KEGG: bam:Bamb_6304 serine-type D-Ala-D-Ala carboxypeptidase YP_004227712.1 PFAM: Abortive infection protein; KEGG: bgf:BC1003_2234 abortive infection protein YP_004227713.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_2233 alpha/beta hydrolase fold protein YP_004227714.1 KEGG: bgf:BC1003_2230 hypothetical protein YP_004227715.1 KEGG: bgf:BC1003_2229 hypothetical protein YP_004227716.1 KEGG: bgf:BC1003_2228 BLUF domain-containing protein YP_004227717.1 PFAM: nitroreductase; KEGG: bgf:BC1003_2227 nitroreductase YP_004227718.1 PFAM: MbtH domain protein; KEGG: bgf:BC1003_2226 MbtH domain-containing protein YP_004227719.1 PFAM: thioesterase; KEGG: bgf:BC1003_2225 thioesterase YP_004227720.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bgf:BC1003_2224 cupin 2 protein YP_004227721.1 PFAM: protein of unknown function YqcI/YcgG; KEGG: bgf:BC1003_2223 hypothetical protein YP_004227722.1 TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; KEGG: bgf:BC1003_2222 cyclic peptide transporter; SMART: ATPase AAA YP_004227723.1 KEGG: bgf:BC1003_2221 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227724.1 PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bgf:BC1003_2220 AMP-dependent synthetase and ligase YP_004227725.1 KEGG: bgf:BC1003_2219 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein YP_004227726.1 KEGG: bgf:BC1003_2218 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; thioesterase YP_004227727.1 KEGG: bgf:BC1003_2217 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004227728.1 PFAM: periplasmic binding protein; KEGG: bgf:BC1003_2216 periplasmic-binding protein YP_004227729.1 PFAM: transport system permease protein; KEGG: bgf:BC1003_2215 transport system permease YP_004227730.1 KEGG: bgf:BC1003_2214 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004227731.1 PFAM: protein of unknown function DUF894 DitE; KEGG: bgf:BC1003_2213 major facilitator superfamily protein YP_004227732.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bgf:BC1003_2212 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004227733.1 KEGG: bgf:BC1003_2211 response regulator receiver modulated chemotaxis protein CheW; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver YP_004227734.1 KEGG: bgf:BC1003_2210 hypothetical protein YP_004227735.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_2208 short-chain dehydrogenase/reductase SDR YP_004227736.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_2207 LysR family transcriptional regulator YP_004227737.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: bgf:BC1003_2206 excinuclease ABC subunit A; SMART: ATPase AAA YP_004227738.1 KEGG: bgf:BC1003_2205 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; SMART: Helix-turn-helix, AraC domain YP_004227739.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: bgf:BC1003_2204 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_004227740.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_2203 hypothetical protein YP_004227741.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_2202 LysR family transcriptional regulator YP_004227742.1 PFAM: protein of unknown function DUF1328; KEGG: bgf:BC1003_2201 hypothetical protein YP_004227743.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: bgf:BC1003_2200 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_004227744.1 PFAM: cellulose synthase; KEGG: bgf:BC1003_2199 transmembrane anchor protein YP_004227745.1 PFAM: General secretory system II protein E domain protein; KEGG: bgf:BC1003_2198 general secretory system II protein E domain-containing protein YP_004227746.1 KEGG: bgf:BC1003_2197 hypothetical protein YP_004227747.1 KEGG: bgf:BC1003_2196 hypothetical protein YP_004227748.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_2195 lysine exporter protein LysE/YggA YP_004227749.1 KEGG: bgf:BC1003_2194 LysR family transcriptional regulator; TIGRFAM: transcriptional regulator, ArgP family; PFAM: LysR substrate-binding; regulatory protein LysR YP_004227750.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1518 transcriptional regulator, LysR family YP_004227751.1 TIGRFAM: amidohydrolase; KEGG: bxe:Bxe_A2955 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004227752.1 KEGG: bpy:Bphyt_1520 general substrate transporter YP_004227753.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_2193 major facilitator superfamily protein YP_004227754.1 PFAM: PRC-barrel domain protein; KEGG: bgf:BC1003_2192 PRC-barrel domain-containing protein YP_004227755.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: bgf:BC1003_2191 xanthine/uracil/vitamin C permease YP_004227756.1 KEGG: bgf:BC1003_2189 hypothetical protein YP_004227757.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_2188 NmrA family protein YP_004227758.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_2187 LysR family transcriptional regulator YP_004227759.1 TIGRFAM: histidine ammonia-lyase; KEGG: bgf:BC1003_2186 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_004227760.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: bgf:BC1003_2185 GntR family transcriptional regulator; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH YP_004227761.1 TIGRFAM: urocanate hydratase; KEGG: bgf:BC1003_2184 urocanate hydratase; PFAM: Urocanase YP_004227762.1 PFAM: protein of unknown function DUF886; KEGG: bgf:BC1003_2183 hypothetical protein YP_004227763.1 TIGRFAM: imidazolonepropionase; KEGG: bgf:BC1003_2182 imidazolonepropionase; PFAM: amidohydrolase YP_004227764.1 KEGG: bgf:BC1003_2181 formiminoglutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase YP_004227765.1 KEGG: bgf:BC1003_2180 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase YP_004227766.1 KEGG: bge:BC1002_1098 hypothetical protein YP_004227767.1 KEGG: bgf:BC1003_2179 hypothetical protein YP_004227768.1 PFAM: transglutaminase domain-containing protein; KEGG: bgf:BC1003_2178 transglutaminase domain-containing protein YP_004227769.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_2177 extracellular ligand-binding receptor YP_004227770.1 KEGG: bgf:BC1003_2176 hypothetical protein YP_004227771.1 TIGRFAM: pyridoxal kinase; KEGG: bgf:BC1003_2175 pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_004227772.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: bgf:BC1003_2174 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1 YP_004227773.1 KEGG: bgf:BC1003_2173 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase YP_004227774.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_2172 alpha/beta hydrolase fold protein YP_004227775.1 KEGG: bgf:BC1003_2171 luciferase family oxidoreductase, group 1; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_004227776.1 KEGG: bgf:BC1003_2169 cysteine dioxygenase type I YP_004227777.1 KEGG: bgf:BC1003_2168 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004227778.1 KEGG: bgf:BC1003_2165 lipoprotein YP_004227779.1 PFAM: Patatin; KEGG: bgf:BC1003_2164 patatin YP_004227780.1 KEGG: bgf:BC1003_2163 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004227781.1 KEGG: bpy:Bphyt_1555 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004227782.1 KEGG: bgf:BC1003_2161 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227783.1 KEGG: bgf:BC1003_2160 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004227784.1 manually curated; KEGG: bcj:BCAM0709 hypothetical protein YP_004227785.1 KEGG: bcj:BCAM0710 metallo peptidase, family M35 YP_004227786.1 KEGG: bpy:Bphyt_2607 hypothetical protein YP_004227787.1 KEGG: bgf:BC1003_2159 succinylornithine transaminase family; TIGRFAM: acetylornithine and succinylornithine aminotransferase; succinylornithine transaminase family; PFAM: aminotransferase class-III YP_004227788.1 TIGRFAM: arginine/ornithine succinyltransferase, alpha subunit; arginine/ornithine succinyltransferase subunit; KEGG: bgf:BC1003_2158 arginine/ornithine succinyltransferase subunit alpha; PFAM: arginine N-succinyltransferase beta subunit YP_004227789.1 TIGRFAM: arginine N-succinyltransferase; arginine/ornithine succinyltransferase subunit; KEGG: bgf:BC1003_2157 arginine N-succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit YP_004227790.1 KEGG: bgf:BC1003_2156 succinylglutamic semialdehyde dehydrogenase; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004227791.1 TIGRFAM: succinylarginine dihydrolase; KEGG: bgf:BC1003_2155 succinylarginine dihydrolase; PFAM: Succinylarginine dihydrolase YP_004227792.1 TIGRFAM: succinylglutamate desuccinylase; KEGG: bgf:BC1003_2154 succinylglutamate desuccinylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase YP_004227793.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bgf:BC1003_2153 cationic amino acid ABC transporter periplasmic-binding protein; SMART: extracellular solute-binding protein family 3 YP_004227794.1 KEGG: bgf:BC1003_2152 diguanylate phosphodiesterase; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein YP_004227795.1 KEGG: bgf:BC1003_2151 signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; SMART: GAF domain protein YP_004227796.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bgf:BC1003_2150 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_004227797.1 KEGG: bgf:BC1003_2149 diguanylate phosphodiesterase; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein YP_004227798.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bgf:BC1003_2147 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004227799.1 KEGG: bgf:BC1003_2146 signal peptide transmembrane protein YP_004227800.1 PFAM: acriflavin resistance protein; KEGG: bgf:BC1003_2145 acriflavin resistance protein YP_004227801.1 PFAM: acriflavin resistance protein; KEGG: bgf:BC1003_2144 acriflavin resistance protein YP_004227802.1 KEGG: bgf:BC1003_2143 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004227803.1 KEGG: bgf:BC1003_2142 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004227804.1 KEGG: bpy:Bphyt_1091 hypothetical protein YP_004227805.1 KEGG: bph:Bphy_4601 hypothetical protein YP_004227806.1 KEGG: bph:Bphy_5143 protein of unknown function LppY and LpqO; manually curated; PFAM: protein of unknown function LppY and LpqO YP_004227807.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_5142 major facilitator transporter YP_004227808.1 KEGG: bph:Bphy_5139 chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter YP_004227809.1 PFAM: Chromate resistance exported protein; PaaX domain protein domain; KEGG: bph:Bphy_5138 chromate resistance exported protein YP_004227810.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rme:Rmet_5665 NmrA-like protein/nucleoside-diphosphate-sugar epimerase YP_004227811.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rme:Rmet_5666 LysR family transcriptional regulator YP_004227812.1 PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: bid:Bind_1631 hypothetical protein YP_004227813.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bpy:Bphyt_5098 AMP-dependent synthetase and ligase YP_004227814.1 PFAM: acyl-CoA dehydrogenase, N-terminal, bacteria; acyl-CoA dehydrogenase domain-containing protein; KEGG: reu:Reut_A1408 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region YP_004227815.1 PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: rme:Rmet_4999 hypothetical protein YP_004227816.1 KEGG: bpy:Bphyt_5099 ATP-dependent transcriptional regulator, MalT-like, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004227817.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bpy:Bphyt_5100 enoyl-CoA hydratase/isomerase YP_004227818.1 KEGG: bgf:BC1003_4728 beta-ketoacyl synthase; PFAM: Thiolase-like YP_004227819.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpy:Bphyt_5102 acyl-CoA dehydrogenase domain protein YP_004227820.1 KEGG: mcc:707618 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 YP_004227821.1 KEGG: bgf:BC1003_4726 thiolase-like protein; PFAM: Thiolase-like YP_004227822.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpy:Bphyt_5104 acyl-CoA dehydrogenase domain protein YP_004227823.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpy:Bphyt_5105 acyl-CoA dehydrogenase domain protein YP_004227824.1 KEGG: bpy:Bphyt_5106 MaoC domain protein dehydratase; PFAM: MaoC domain protein dehydratase YP_004227825.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_5107 short-chain dehydrogenase/reductase SDR YP_004227826.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bpy:Bphyt_5108 acyl-CoA dehydrogenase domain protein YP_004227827.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpy:Bphyt_5109 L-carnitine dehydratase/bile acid-inducible protein F YP_004227828.1 PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_5110 porin gram-negative type YP_004227829.1 PFAM: transport-associated; KEGG: bxe:Bxe_B1679 transport-associated protein YP_004227830.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_5111 short-chain dehydrogenase/reductase SDR YP_004227832.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2715 major facilitator superfamily metabolite/H(+) symporter YP_004227833.1 TIGRFAM: muconolactone delta-isomerase; KEGG: bpy:Bphyt_1587 muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase YP_004227834.1 KEGG: bpy:Bphyt_1588 muconate and chloromuconate cycloisomerase; TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein YP_004227835.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1589 transcriptional regulator, LysR family YP_004227836.1 KEGG: bpy:Bphyt_1590 catechol 1,2-dioxygenase; TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein YP_004227837.1 PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; Rieske [2Fe-2S] iron-sulphur domain; KEGG: rpi:Rpic_1364 Rieske (2Fe-2S) domain protein YP_004227838.1 TIGRFAM: benzoate 1,2-dioxygenase, small subunit; KEGG: bmj:BMULJ_05286 2-chlorobenzoate 1,2-dioxygenase; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit YP_004227839.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: bpy:Bphyt_1593 oxidoreductase FAD/NAD(P)-binding domain protein YP_004227840.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_1594 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase YP_004227841.1 PFAM: Domain of unknown function DUF3597; KEGG: bgf:BC1003_2032 hypothetical protein YP_004227842.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bgf:BC1003_2031 hypothetical protein YP_004227843.1 PFAM: PRC-barrel domain protein; KEGG: bgf:BC1003_2030 PRC-barrel domain-containing protein YP_004227844.1 KEGG: bgf:BC1003_2029 CrcB protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_004227845.1 PFAM: ammonium transporter; KEGG: bgf:BC1003_2028 ammonium transporter YP_004227846.1 KEGG: bgf:BC1003_2027 histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004227847.1 KEGG: bgf:BC1003_2026 hypothetical protein YP_004227848.1 KEGG: bgf:BC1003_2025 intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain-containing protein YP_004227849.1 KEGG: bgf:BC1003_2024 hypothetical protein YP_004227850.1 PFAM: protein of unknown function UPF0074; KEGG: bgf:BC1003_2023 BadM/Rrf2 family transcriptional regulator YP_004227851.1 KEGG: bgf:BC1003_2022 dTDP-4-dehydrorhamnose reductase YP_004227852.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bgf:BC1003_2021 mechanosensitive ion channel protein MscS YP_004227853.1 PFAM: cysteine dioxygenase type I; KEGG: bgf:BC1003_2020 cysteine dioxygenase type I YP_004227854.1 KEGG: bgf:BC1003_2019 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004227855.1 PFAM: protein of unknown function DUF1326; KEGG: reh:PHG114 hypothetical protein YP_004227856.1 PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: bac:BamMC406_4354 metal-binding integral membrane protein-like protein YP_004227857.1 KEGG: bgf:BC1003_2018 signal peptide transmembrane protein YP_004227858.1 KEGG: bgf:BC1003_2017 hypothetical protein YP_004227859.1 KEGG: bgf:BC1003_2016 exodeoxyribonuclease V subunit gamma; TIGRFAM: exodeoxyribonuclease V, gamma subunit YP_004227860.1 KEGG: bgf:BC1003_2015 exodeoxyribonuclease V subunit beta; TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase YP_004227861.1 KEGG: bgf:BC1003_2014 exodeoxyribonuclease V subunit alpha; TIGRFAM: exodeoxyribonuclease V, alpha subunit YP_004227862.1 KEGG: bxe:Bxe_A2836 transmembrane protein YP_004227863.1 PFAM: peptide chain release factor 1; KEGG: bgf:BC1003_2013 peptide chain release factor 1 YP_004227864.1 KEGG: bgf:BC1003_2012 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_004227865.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bxe:Bxe_A2833 hypothetical protein YP_004227866.1 KEGG: bpy:Bphyt_1620 hypothetical protein YP_004227867.1 KEGG: bgf:BC1003_2009 signal peptide protein YP_004227868.1 KEGG: bgf:BC1003_2008 hypothetical protein; manually curated; PFAM: protein of unknown function DUF218 YP_004227869.1 KEGG: bgf:BC1003_2007 hypothetical protein YP_004227870.1 KEGG: bgf:BC1003_2006 hypothetical protein YP_004227871.1 KEGG: bgf:BC1003_2005 transposase A protein YP_004227872.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_2004 LysR family transcriptional regulator YP_004227873.1 PFAM: aminotransferase class I and II; KEGG: bgf:BC1003_2003 class I/II aminotransferase YP_004227874.1 KEGG: bgf:BC1003_2002 chromosome segregation and condensation protein, ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_004227875.1 KEGG: bgf:BC1003_2001 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004227876.1 PFAM: protein of unknown function DUF150; KEGG: bgf:BC1003_2000 hypothetical protein YP_004227877.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; KEGG: bgf:BC1003_1999 transcription termination factor NusA; SMART: KH domain protein YP_004227878.1 KEGG: bgf:BC1003_1998 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Initiation factor 2 associated domain protein ; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein YP_004227879.1 KEGG: bgf:BC1003_1997 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_004227880.1 KEGG: bgf:BC1003_1996 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B YP_004227881.1 KEGG: bgf:BC1003_1995 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004227882.1 KEGG: bgf:BC1003_1994 efflux pump membrane protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein YP_004227883.1 KEGG: bgf:BC1003_1993 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004227884.1 KEGG: bgf:BC1003_1992 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004227885.1 TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; KEGG: bgf:BC1003_1991 GTP-binding protein TypA; SMART: elongation factor G domain-containing protein YP_004227886.1 SMART: Transketolase central region; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: bgf:BC1003_1989 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component YP_004227887.1 KEGG: bxe:Bxe_A2811 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004227888.1 KEGG: bgf:BC1003_1987 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004227889.1 PFAM: AFG1-family ATPase; KEGG: bgf:BC1003_1986 AFG1-family ATPase YP_004227890.1 KEGG: bgf:BC1003_1985 transposase protein YP_004227891.1 PFAM: Protein of unknown function DUF2147; KEGG: bxe:Bxe_A2807 signal peptide protein YP_004227892.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: bgf:BC1003_1983 polypeptide-transport-associated domain-containing protein ShlB-type YP_004227893.1 KEGG: bgf:BC1003_1982 membrane protein, glycine-rich YP_004227894.1 KEGG: bgf:BC1003_1981 membrane protein, glycine-rich YP_004227895.1 PFAM: Flp/Fap pilin component; KEGG: bgf:BC1003_1980 Flp/Fap pilin component YP_004227896.1 PFAM: peptidase A24A prepilin type IV; KEGG: bgf:BC1003_1979 peptidase A24A prepilin type IV YP_004227897.1 PFAM: TadE family protein; KEGG: bgf:BC1003_1978 TadE family protein YP_004227898.1 KEGG: bgf:BC1003_1977 Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein YP_004227899.1 PFAM: type II and III secretion system protein; KEGG: bgf:BC1003_1976 type II and III secretion system protein YP_004227900.1 PFAM: response regulator receiver; KEGG: bgf:BC1003_1975 pilus assembly protein, CpaE-like protein YP_004227901.1 PFAM: type II secretion system protein E; KEGG: bgf:BC1003_1974 type II secretion system protein E YP_004227902.1 PFAM: Type II secretion system F domain; KEGG: bgf:BC1003_1973 type II secretion system F domain-containing protein YP_004227903.1 PFAM: Type II secretion system F domain; KEGG: bgf:BC1003_1972 type II secretion system F domain-containing protein YP_004227904.1 KEGG: bgf:BC1003_1971 tetratricopeptide repeat-containing protein YP_004227905.1 KEGG: bgf:BC1003_1970 hypothetical protein YP_004227906.1 PFAM: Protein of unknown function DUF2134, membrane; KEGG: bgf:BC1003_1969 hypothetical protein YP_004227907.1 KEGG: bgf:BC1003_1968 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_004227908.1 PFAM: Protein of unknown function DUF2968; KEGG: bgf:BC1003_1967 signal peptide protein YP_004227909.1 KEGG: bgf:BC1003_1966 hypothetical protein YP_004227910.1 KEGG: bgf:BC1003_1965 hypothetical protein YP_004227911.1 KEGG: bgf:BC1003_1964 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_004227912.1 KEGG: bgf:BC1003_1963 hypothetical protein YP_004227913.1 KEGG: bgf:BC1003_1962 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004227914.1 KEGG: bgf:BC1003_1961 transmembrane anti-sigma factor YP_004227915.1 PFAM: FAD linked oxidase domain protein; KEGG: bgf:BC1003_1960 FAD linked oxidase domain-containing protein YP_004227916.1 KEGG: bgf:BC1003_1959 hypothetical protein YP_004227917.1 PFAM: protein of unknown function DUF1571; KEGG: bgf:BC1003_1958 signal peptide transmembrane protein YP_004227918.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_1957 AMP-dependent synthetase and ligase YP_004227919.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bgf:BC1003_1956 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004227920.1 PFAM: MaoC domain protein dehydratase; KEGG: bgf:BC1003_1955 MaoC domain-containing protein dehydratase YP_004227921.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_1954 short-chain dehydrogenase/reductase SDR YP_004227922.1 PFAM: protein of unknown function DUF1974; acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_1953 hypothetical protein YP_004227923.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_1952 regulatory protein TetR YP_004227924.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1951 major facilitator superfamily protein YP_004227925.1 KEGG: bgf:BC1003_1950 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_004227926.1 KEGG: bgf:BC1003_1948 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: response regulator receiver; Hpt domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004227927.1 KEGG: bgf:BC1003_1947 hypothetical protein YP_004227928.1 KEGG: bmj:BMULJ_06276 hypothetical protein YP_004227929.1 manually curated; KEGG: bvi:Bcep1808_3979 hypothetical protein YP_004227930.1 KEGG: bgf:BC1003_3412 hypothetical protein YP_004227931.1 PFAM: outer membrane efflux protein; KEGG: bge:BC1002_5607 outer membrane efflux protein YP_004227932.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: bgf:BC1003_3410 multicopper oxidase type 3 YP_004227933.1 PFAM: Copper binding periplasmic protein CusF; KEGG: bph:Bphy_2039 hypothetical protein YP_004227934.1 KEGG: bgf:BC1003_1946 cytochrome b561 YP_004227935.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bgf:BC1003_1945 oxidoreductase molybdopterin-binding protein YP_004227936.1 KEGG: bgf:BC1003_1944 hypothetical protein YP_004227937.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_1943 hypothetical protein YP_004227938.1 KEGG: bgf:BC1003_1942 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004227939.1 KEGG: bgf:BC1003_1940 methyltransferase; TIGRFAM: methyltransferase; PFAM: Leucine carboxyl methyltransferase YP_004227940.1 KEGG: bgf:BC1003_1939 chromate transporter chromate ion transporter (CHR) family; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter YP_004227941.1 KEGG: bgf:BC1003_1938 phage SPO1 DNA polymerase-related protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase YP_004227942.1 KEGG: bgf:BC1003_1937 radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004227943.1 PFAM: Phosphoesterase HXTX; KEGG: bgf:BC1003_1936 phosphoesterase HXTX YP_004227944.1 PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: bgf:BC1003_1935 DnaJ-like, subfamily C, containing protein YP_004227945.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bgf:BC1003_1934 CMP/dCMP deaminase zinc-binding protein YP_004227946.1 KEGG: bgf:BC1003_1933 muramoyltetrapeptide carboxypeptidase; PFAM: peptidase U61 LD-carboxypeptidase A YP_004227947.1 KEGG: bgf:BC1003_1932 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH YP_004227948.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: bgf:BC1003_1931 permease for cytosine/purines uracil thiamine allantoin YP_004227949.1 KEGG: bgf:BC1003_1930 hydantoin racemase; PFAM: Asp/Glu/hydantoin racemase YP_004227950.1 TIGRFAM: urate catabolism protein; KEGG: bgf:BC1003_1929 urate catabolism protein; PFAM: polysaccharide deacetylase YP_004227951.1 KEGG: bgf:BC1003_1928 OHCU decarboxylase; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase YP_004227952.1 TIGRFAM: allantoicase; KEGG: bgf:BC1003_1927 allantoicase; PFAM: Allantoicase domain YP_004227953.1 KEGG: bge:BC1002_1735 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase YP_004227954.1 PFAM: protein of unknown function DUF989; cytochrome c class I; KEGG: bgf:BC1003_1924 hypothetical protein YP_004227955.1 TIGRFAM: hydroxyisourate hydrolase; KEGG: bgf:BC1003_1923 hydroxyisourate hydrolase; PFAM: Transthyretin YP_004227956.1 PFAM: amidohydrolase; KEGG: bgf:BC1003_1922 amidohydrolase YP_004227957.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1921 LysR family transcriptional regulator YP_004227958.1 KEGG: bgf:BC1003_1920 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227959.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_1919 inner-membrane translocator YP_004227960.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_1918 inner-membrane translocator YP_004227961.1 PFAM: basic membrane lipoprotein; KEGG: bgf:BC1003_1917 basic membrane lipoprotein YP_004227962.1 PFAM: protein of unknown function DUF1458; KEGG: bgf:BC1003_1916 hypothetical protein YP_004227963.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bpy:Bphyt_2316 6-phosphogluconate dehydrogenase NAD-binding YP_004227964.1 KEGG: bgf:BC1003_1913 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004227965.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_1908 aldehyde dehydrogenase YP_004227966.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bgf:BC1003_1907 2-nitropropane dioxygenase NPD YP_004227967.1 PFAM: OmpW family protein; KEGG: bgf:BC1003_1906 OmpW family protein YP_004227968.1 PFAM: protein of unknown function DUF1289; KEGG: bgf:BC1003_1905 hypothetical protein YP_004227969.1 PFAM: phospholipase A1; KEGG: bgf:BC1003_1904 phospholipase A1 YP_004227970.1 KEGG: bgf:BC1003_1903 Mn2+/Fe2+ transporter NRAMP family; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_004227971.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_1902 extracellular solute-binding protein family 1 YP_004227972.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: bgf:BC1003_1901 spermidine/putrescine ABC transporter ATPase subunit; SMART: ATPase AAA YP_004227973.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_1900 binding-protein-dependent transport systems inner membrane component YP_004227974.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_1899 binding-protein-dependent transport systems inner membrane component YP_004227975.1 KEGG: bgf:BC1003_1898 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_004227976.1 manually curated; KEGG: bgf:BC1003_1897 hypothetical protein YP_004227977.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_1896 alpha/beta hydrolase fold protein YP_004227978.1 KEGG: bgf:BC1003_1895 flavin-binding monooxygenase-like protein YP_004227979.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_1894 regulatory protein TetR YP_004227980.1 KEGG: bgf:BC1003_1893 tetratricopeptide repeat-containing protein YP_004227981.1 PFAM: PspA/IM30 family protein; KEGG: bgf:BC1003_1892 phage shock protein A, PspA YP_004227982.1 KEGG: bgf:BC1003_1891 hypothetical protein YP_004227983.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: bgf:BC1003_1890 penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004227984.1 KEGG: bgf:BC1003_1889 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004227985.1 PFAM: acriflavin resistance protein; KEGG: bgf:BC1003_1888 acriflavin resistance protein YP_004227986.1 KEGG: bgf:BC1003_1887 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004227987.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_1886 regulatory protein TetR YP_004227988.1 KEGG: bpy:Bphyt_2290 hypothetical protein YP_004227989.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1884 LysR family transcriptional regulator YP_004227990.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bgf:BC1003_1883 cyclic nucleotide-binding protein YP_004227991.1 KEGG: bgf:BC1003_1882 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004227992.1 PFAM: Protein of unknown function DUF2795; KEGG: bgf:BC1003_1881 hypothetical protein YP_004227993.1 KEGG: bgf:BC1003_1880 hypothetical protein YP_004227994.1 PFAM: Laminin A family protein; KEGG: bgf:BC1003_1879 hypothetical protein YP_004227995.1 KEGG: bgf:BC1003_1878 Cl-channel voltage-gated family protein; manually curated; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein YP_004227996.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_1877 glutathione S-transferase YP_004227997.1 PFAM: Uncharacterised protein family UPF0324; KEGG: bgf:BC1003_1876 hypothetical protein YP_004227998.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1875 LysR family transcriptional regulator YP_004227999.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: bgf:BC1003_1874 xylose isomerase domain-containing protein YP_004228000.1 PFAM: PfkB domain protein; KEGG: bxe:Bxe_A1980 sugar (2-ketogluconate) kinase YP_004228001.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1872 major facilitator superfamily protein YP_004228002.1 KEGG: bgf:BC1003_1871 gluconate 2-dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_004228003.1 KEGG: bgf:BC1003_1870 LacI family transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004228004.1 PFAM: protein of unknown function UCP033101; KEGG: bgf:BC1003_1869 hypothetical protein YP_004228005.1 PFAM: Protein of unknown function DUF3022; KEGG: bgf:BC1003_1868 hypothetical protein YP_004228006.1 KEGG: bgf:BC1003_1867 hypothetical protein YP_004228007.1 KEGG: bgf:BC1003_1866 hypothetical protein YP_004228008.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1865 LysR family transcriptional regulator YP_004228009.1 KEGG: bgf:BC1003_1864 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004228010.1 PFAM: Saccharopine dehydrogenase; KEGG: bgf:BC1003_1863 saccharopine dehydrogenase YP_004228011.1 KEGG: bgf:BC1003_1862 P-loop ATPase protein YP_004228012.1 KEGG: bgf:BC1003_1860 magnesium and cobalt transport protein CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_004228013.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bgf:BC1003_1859 periplasmic-binding protein/LacI transcriptional regulator YP_004228014.1 KEGG: bgf:BC1003_1858 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228015.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_1857 inner-membrane translocator YP_004228016.1 KEGG: bgf:BC1003_1856 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004228017.1 KEGG: bgf:BC1003_1855 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein YP_004228018.1 KEGG: bgf:BC1003_1853 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004228019.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bgf:BC1003_1851 hydratase/decarboxylase YP_004228020.1 KEGG: bgf:BC1003_1850 serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_004228021.1 PFAM: protein of unknown function DUF444; KEGG: bgf:BC1003_1849 hypothetical protein YP_004228022.1 PFAM: SpoVR family protein; KEGG: bgf:BC1003_1848 SpoVR family protein YP_004228023.1 KEGG: bgf:BC1003_1847 hypothetical protein YP_004228024.1 KEGG: bgf:BC1003_1846 metabolite/H+ symporter, major facilitator superfamily (MFS); TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1 YP_004228025.1 KEGG: bgf:BC1003_1845 hypothetical protein YP_004228026.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_1844 glycosyl transferase family 2 YP_004228027.1 KEGG: bgf:BC1003_1843 hypothetical protein YP_004228028.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1842 LysR family transcriptional regulator YP_004228029.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1841 drug resistance transporter EmrB/QacA subfamily YP_004228030.1 KEGG: bgf:BC1003_1840 alkylhydroperoxidase like protein, AhpD family; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004228031.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bgf:BC1003_1839 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004228032.1 KEGG: bgf:BC1003_1838 hypothetical protein YP_004228033.1 KEGG: bge:BC1002_3299 gluconate 2-dehydrogenase (acceptor) YP_004228034.1 PFAM: protein of unknown function DUF421; KEGG: bgf:BC1003_1837 hypothetical protein YP_004228035.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1836 major facilitator superfamily protein YP_004228036.1 KEGG: bgf:BC1003_1835 hypothetical protein YP_004228037.1 KEGG: bgf:BC1003_1834 hypothetical protein YP_004228038.1 KEGG: bgf:BC1003_1833 hypothetical protein YP_004228039.1 PFAM: virulence factor family protein; KEGG: bgf:BC1003_1832 virulence factor family protein YP_004228040.1 KEGG: bgf:BC1003_1831 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase YP_004228041.1 PFAM: phosphopantetheine-binding; KEGG: bgf:BC1003_1830 ACP YP_004228042.1 KEGG: bgf:BC1003_1829 esterase/lipase/thioesterase YP_004228043.1 KEGG: bgf:BC1003_1828 threonine dehydratase, biosynthetic; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain-containing protein YP_004228044.1 KEGG: bgf:BC1003_1827 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding YP_004228045.1 KEGG: bgf:BC1003_1826 hypothetical protein YP_004228046.1 KEGG: bgf:BC1003_1825 hypothetical protein YP_004228047.1 KEGG: bgf:BC1003_1824 signal peptide protein YP_004228048.1 KEGG: bgf:BC1003_1823 lipoprotein YP_004228049.1 PFAM: cytochrome b/b6 domain; KEGG: bgf:BC1003_1822 cytochrome b561 YP_004228050.1 KEGG: bgf:BC1003_1821 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004228051.1 KEGG: bgf:BC1003_1820 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_004228052.1 KEGG: bgf:BC1003_1819 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; PFAM: KduI/IolB isomerase YP_004228053.1 KEGG: bgf:BC1003_1818 2-keto-3-deoxygluconate transporter; TIGRFAM: 2-keto-3-deoxygluconate transporter; PFAM: 2-keto-3-deoxygluconate permease YP_004228054.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_1817 aldehyde dehydrogenase YP_004228055.1 KEGG: bgf:BC1003_1816 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004228056.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; KEGG: bgf:BC1003_1748 hopanoid biosynthesis associated radical SAM protein HpnJ; SMART: Elongator protein 3/MiaB/NifB YP_004228057.1 KEGG: bpy:Bphyt_2200 hopanoid biosynthesis associated glycosyl transferase protein HpnI; TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2 YP_004228058.1 KEGG: bgf:BC1003_1747 membrane protein YP_004228059.1 KEGG: bgf:BC1003_1746 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004228060.1 KEGG: bgf:BC1003_1745 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004228061.1 KEGG: bgf:BC1003_1744 hypothetical protein YP_004228062.1 KEGG: bgf:BC1003_1743 hopanoid biosynthesis associated glycosyl transferase protein HpnI; TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2 YP_004228063.1 KEGG: bgf:BC1003_1742 hopanoid biosynthesis associated protein HpnK; TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein YP_004228064.1 PFAM: Fertility inhibition FinO-like; KEGG: bgf:BC1003_1814 fertility inhibition FinO-like protein YP_004228065.1 KEGG: bgf:BC1003_1813 TRAP-type uncharacterized transport system, periplasmic component protein YP_004228066.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_1812 short-chain dehydrogenase/reductase SDR YP_004228067.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bge:BC1002_1614 transcriptional regulator, LysR family YP_004228068.1 KEGG: bxe:Bxe_A2116 2-aminoethylphosphonate--pyruvate transaminase; TIGRFAM: 2-aminoethylphosphonate/pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V YP_004228069.1 TIGRFAM: phosphonoacetaldehyde hydrolase; KEGG: bpy:Bphyt_2141 phosphonoacetaldehyde hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004228070.1 PFAM: Protein of unknown function DUF3731; Heat shock protein 70; KEGG: bgf:BC1003_1810 chaperone protein, HscA/DnaK YP_004228071.1 PFAM: Heat shock protein 70; KEGG: bgf:BC1003_1809 molecular chaperone protein HspA/DnaK YP_004228072.1 PFAM: Domain of unknown function DUF2760; KEGG: bgf:BC1003_1808 hypothetical protein YP_004228073.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: bgf:BC1003_1807 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004228074.1 KEGG: bgf:BC1003_1805 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein YP_004228075.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_1804 inner-membrane translocator YP_004228076.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_5192 periplasmic binding protein/LacI transcriptional regulator YP_004228077.1 KEGG: bgf:BC1003_1802 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228078.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_1801 inner-membrane translocator YP_004228079.1 KEGG: bgf:BC1003_1800 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004228080.1 PFAM: Protein of unknown function DUF2934; KEGG: bgf:BC1003_1799 hypothetical protein YP_004228081.1 KEGG: bgf:BC1003_1798 hypothetical protein YP_004228082.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1797 glycosyl transferase group 1 YP_004228083.1 SMART: ATPase AAA; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; KEGG: bgf:BC1003_1796 HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004228084.1 KEGG: bgf:BC1003_1795 winged helix family transcriptional regulator; PFAM: transcriptional regulator domain-containing protein; NB-ARC domain protein; SMART: transcriptional regulator domain-containing protein; ATPase AAA YP_004228085.1 KEGG: bgf:BC1003_1794 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004228086.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_1792 alpha/beta hydrolase fold protein YP_004228087.1 PFAM: Amidohydrolase 3; KEGG: bgf:BC1003_1790 amidohydrolase 3 YP_004228088.1 KEGG: bgf:BC1003_1789 cyclic nucleotide-regulated small mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004228089.1 KEGG: bgf:BC1003_1788 hypothetical protein YP_004228090.1 KEGG: bpy:Bphyt_6129 protein of unknown function DUF1427; TIGRFAM: XapX domain protein; PFAM: protein of unknown function DUF1427 YP_004228091.1 KEGG: bgf:BC1003_1786 hypothetical protein YP_004228092.1 KEGG: bgf:BC1003_1785 hypothetical protein YP_004228093.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-binding; KEGG: bgf:BC1003_1784 cyclic nucleotide-binding protein; SMART: cyclic nucleotide-binding YP_004228094.1 PFAM: Protein of unknown function DUF3331; KEGG: bgf:BC1003_1782 hypothetical protein YP_004228095.1 KEGG: bgf:BC1003_1781 winged helix family transcriptional regulator; PFAM: transcriptional regulator domain-containing protein; SMART: transcriptional regulator domain-containing protein YP_004228096.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1780 LysR family transcriptional regulator YP_004228097.1 SMART: beta-lactamase domain protein; KEGG: xcc:XCC2263 hypothetical protein YP_004228098.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1779 LysR family transcriptional regulator YP_004228099.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bgf:BC1003_1778 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004228100.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1777 major facilitator superfamily protein YP_004228101.1 KEGG: bxe:Bxe_B0806 hypothetical protein YP_004228102.1 PFAM: Integral membrane protein TerC; KEGG: bpy:Bphyt_4488 integral membrane protein TerC YP_004228103.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bgf:BC1003_1771 LysR family transcriptional regulator YP_004228104.1 KEGG: bgf:BC1003_1770 hypothetical protein YP_004228105.1 PFAM: aminotransferase class-III; KEGG: bgf:BC1003_1769 aminotransferase class-III YP_004228106.1 KEGG: bgf:BC1003_1768 glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region YP_004228107.1 KEGG: bxe:Bxe_B0943 glutamine amidotransferase; PFAM: peptidase C26 YP_004228108.1 KEGG: bxe:Bxe_A2872 hypothetical protein YP_004228109.1 KEGG: bvi:Bcep1808_1831 hypothetical protein YP_004228110.1 KEGG: shl:Shal_1592 acetyltransferase YP_004228111.1 PFAM: Domain of unknown function DUF1924; KEGG: bgl:bglu_2g10730 cytochrome c'' YP_004228112.1 KEGG: bgl:bglu_2g10720 hypothetical protein; manually curated; PFAM: Dihaem cytochrome c YP_004228113.1 KEGG: bgl:bglu_2g10710 cytochrome b561/heavy metal translocating P-type ATPase fusion protein YP_004228114.1 KEGG: bmj:BMULJ_05659 OmpR family two-component system response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004228115.1 KEGG: bvi:Bcep1808_6298 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain-containing protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004228116.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bgf:BC1003_1711 NAD(P)H dehydrogenase (quinone) YP_004228117.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bgf:BC1003_1710 cupin YP_004228118.1 KEGG: bgf:BC1003_1709 hypothetical protein YP_004228119.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1708 major facilitator superfamily protein YP_004228120.1 KEGG: bgf:BC1003_1707 peptidoglycan glycosyltransferase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004228121.1 KEGG: bgf:BC1003_1706 trans-2-enoyl-CoA reductase (NAD(+)); PFAM: short-chain alcohol dehydrogenase YP_004228122.1 PFAM: Glutathione S-transferase domain; KEGG: bpy:Bphyt_2009 glutathione S-transferase domain YP_004228123.1 KEGG: bgf:BC1003_1705 hypothetical protein YP_004228124.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1704 LysR family transcriptional regulator YP_004228125.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bgf:BC1003_1703 glucose-methanol-choline oxidoreductase YP_004228126.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bgf:BC1003_1702 mandelate racemase/muconate lactonizing protein YP_004228127.1 KEGG: bgf:BC1003_1701 major facilitator superfamily protein; manually curated; PFAM: major facilitator superfamily MFS_1 YP_004228128.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_1700 aldehyde dehydrogenase YP_004228129.1 KEGG: bgf:BC1003_1697 methyl-accepting chemotaxis sensory transducer YP_004228130.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1696 major facilitator superfamily protein YP_004228131.1 KEGG: bte:BTH_I1647 murein transglycosylase domain-containing protein YP_004228132.1 KEGG: bgf:BC1003_1692 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004228133.1 PFAM: MOSC domain protein beta barrel domain protein; MOSC domain containing protein; KEGG: bgf:BC1003_1691 MOSC domain-containing protein beta barrel domain-containing protein YP_004228134.1 PFAM: protein of unknown function DUF336; CBS domain containing protein; KEGG: bgf:BC1003_1690 hypothetical protein YP_004228135.1 TIGRFAM: malate synthase G; KEGG: bgf:BC1003_1689 malate synthase G; PFAM: Malate synthase family protein YP_004228136.1 KEGG: bgf:BC1003_1688 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_004228137.1 KEGG: bgf:BC1003_1687 hypothetical protein YP_004228138.1 PFAM: acyltransferase 3; KEGG: bgf:BC1003_1686 acyltransferase 3 YP_004228139.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1684 glycosyl transferase group 1 YP_004228140.1 PFAM: polysaccharide biosynthesis protein; KEGG: bgf:BC1003_1683 polysaccharide biosynthesis protein YP_004228141.1 KEGG: bgf:BC1003_1682 hypothetical protein YP_004228142.1 PFAM: acyltransferase 3; KEGG: bgf:BC1003_1681 acyltransferase 3 YP_004228143.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bgf:BC1003_1680 lipolytic protein G-D-S-L family YP_004228144.1 KEGG: bgf:BC1003_1679 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004228145.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1678 glycosyl transferase group 1 YP_004228146.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1677 glycosyl transferase group 1 YP_004228147.1 KEGG: bgf:BC1003_1676 transmembrane protein YP_004228148.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1675 glycosyltransferase group 1, RfaG-like protein YP_004228149.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_1674 glycosyl transferase family 2 YP_004228150.1 TIGRFAM: capsular exopolysaccharide family; KEGG: bgf:BC1003_1673 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_004228151.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bgf:BC1003_1672 polysaccharide export protein YP_004228152.1 KEGG: bgf:BC1003_1671 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004228153.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bgf:BC1003_1670 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation YP_004228154.1 TIGRFAM: UDP-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: bgf:BC1003_1669 UDP-phosphate glucose phosphotransferase; PFAM: sugar transferase YP_004228155.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bgf:BC1003_1668 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase YP_004228156.1 KEGG: bgf:BC1003_1667 transposase A-like protein YP_004228157.1 PFAM: YCII-related; KEGG: bgf:BC1003_1666 YCII-related protein YP_004228158.1 PFAM: PsiF repeat-containing protein; KEGG: bgf:BC1003_1665 PsiF repeat-containing protein YP_004228159.1 KEGG: bgf:BC1003_1664 transmembrane protein YP_004228160.1 KEGG: bgf:BC1003_1663 lipoprotein YP_004228161.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1662 glycosyl transferase group 1 YP_004228162.1 PFAM: SMC domain protein; KEGG: bgf:BC1003_1661 SMC domain-containing protein YP_004228163.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: bgf:BC1003_1660 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_004228164.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bgf:BC1003_1659 mechanosensitive ion channel protein MscS YP_004228165.1 KEGG: bgf:BC1003_1658 hypothetical protein YP_004228166.1 PFAM: Ankyrin; KEGG: bgf:BC1003_1657 ankyrin repeat-containing signal peptide protein YP_004228167.1 KEGG: bgf:BC1003_1656 hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_004228168.1 KEGG: bgf:BC1003_1655 phosphinothricin acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004228169.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: bpy:Bphyt_1940 DNA polymerase III subunit delta' YP_004228170.1 TIGRFAM: thymidylate kinase; KEGG: bgf:BC1003_1653 thymidylate kinase; PFAM: thymidylate kinase YP_004228171.1 PFAM: aminodeoxychorismate lyase; KEGG: bgf:BC1003_1652 aminodeoxychorismate lyase YP_004228172.1 KEGG: bgf:BC1003_1651 folate-binding protein YgfZ; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase) YP_004228173.1 PFAM: protein of unknown function DUF833; KEGG: bgf:BC1003_1650 hypothetical protein YP_004228174.1 KEGG: bgf:BC1003_1649 alpha/beta hydrolase fold-3 domain-containing protein YP_004228175.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_1648 short-chain dehydrogenase/reductase SDR YP_004228176.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bgf:BC1003_1646 alcohol dehydrogenase zinc-binding domain-containing protein YP_004228177.1 PFAM: thioesterase superfamily protein; KEGG: bgf:BC1003_1645 thioesterase superfamily protein YP_004228178.1 KEGG: bgf:BC1003_1644 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004228179.1 KEGG: bgf:BC1003_1643 hypothetical protein YP_004228180.1 KEGG: bgf:BC1003_1642 water stress and hypersensitive response domain-containing protein; PFAM: Late embryogenesis abundant protein 2; SMART: Water Stress and Hypersensitive response domain-containing protein YP_004228181.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bgf:BC1003_1641 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004228182.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_1640 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein YP_004228183.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_1639 AMP-dependent synthetase and ligase YP_004228184.1 PFAM: protein of unknown function UPF0061; KEGG: bgf:BC1003_1638 hypothetical protein YP_004228185.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: bgf:BC1003_1637 methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B YP_004228186.1 KEGG: bgf:BC1003_1636 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A YP_004228187.1 PFAM: BolA family protein; KEGG: bgf:BC1003_1635 BolA family protein YP_004228188.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bxe:Bxe_A2280 peptidyl-prolyl cis-trans isomerase YP_004228189.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: bgf:BC1003_1633 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_004228190.1 KEGG: bgf:BC1003_1632 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase YP_004228191.1 KEGG: bgf:BC1003_1631 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain-containing protein YP_004228192.1 KEGG: bgf:BC1003_1630 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_004228193.1 KEGG: bgf:BC1003_1627 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228194.1 KEGG: bxe:Bxe_A2289 arylesterase; PFAM: lipolytic protein G-D-S-L family YP_004228195.1 KEGG: bgf:BC1003_1625 hypothetical protein YP_004228196.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bgf:BC1003_1624 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004228197.1 KEGG: bgf:BC1003_1604 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004228198.1 SMART: peptidase S16 lon domain protein; ATPase AAA; TIGRFAM: ATP-dependent protease La; KEGG: bgf:BC1003_1603 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA central domain protein YP_004228199.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: bgf:BC1003_1602 ATP-dependent Clp protease, ATP-binding subunit ClpX; SMART: ATPase AAA YP_004228200.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: bgf:BC1003_1601 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_004228201.1 KEGG: bgf:BC1003_1600 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type YP_004228202.1 TIGRFAM: glycerate kinase; KEGG: bgf:BC1003_1599 glycerate kinase; PFAM: glycerate kinase YP_004228203.1 KEGG: bgf:BC1003_1598 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004228204.1 KEGG: bgf:BC1003_1597 transmembrane protein YP_004228205.1 PFAM: Protein of unknown function DUF2339, transmembrane; KEGG: bpy:Bphyt_1901 membrane protein-like protein YP_004228206.1 KEGG: bgf:BC1003_1595 hypothetical protein YP_004228207.1 PFAM: squalene/phytoene synthase; KEGG: bgf:BC1003_1594 squalene/phytoene synthase YP_004228208.1 KEGG: bgf:BC1003_1592 hypothetical protein YP_004228209.1 KEGG: bgf:BC1003_1591 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004228210.1 KEGG: bgf:BC1003_1590 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004228211.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bgf:BC1003_1589 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004228212.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; KEGG: bgf:BC1003_1588 alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004228213.1 KEGG: bgf:BC1003_1587 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_004228214.1 manually curated; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: bgf:BC1003_1586 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004228215.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: bgf:BC1003_1585 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_004228216.1 KEGG: bgf:BC1003_1584 acetylornithine deacetylase (ArgE); TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein YP_004228217.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bgf:BC1003_1583 pyridoxal-5'-phosphate-dependent protein subunit beta YP_004228218.1 KEGG: bgf:BC1003_1582 large conductance mechanosensitive channel protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_004228219.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: bgf:BC1003_1581 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein YP_004228220.1 KEGG: bgf:BC1003_1580 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004228221.1 KEGG: bgf:BC1003_1579 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004228222.1 KEGG: bgf:BC1003_1578 hypothetical protein YP_004228223.1 PFAM: AsmA family protein; KEGG: bgf:BC1003_1576 AsmA family protein YP_004228224.1 KEGG: bgf:BC1003_1575 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228225.1 PFAM: Conserved hypothetical protein CHP00245; KEGG: bgf:BC1003_1574 hypothetical protein YP_004228226.1 KEGG: bgf:BC1003_1573 hypothetical protein YP_004228227.1 KEGG: bgf:BC1003_1572 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004228228.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1571 LysR family transcriptional regulator YP_004228229.1 KEGG: bgf:BC1003_1570 hypothetical protein YP_004228230.1 KEGG: bgf:BC1003_1569 DNA ligase D; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; PFAM: ATP dependent DNA ligase domain protein; DNA primase small subunit; ATP dependent DNA ligase YP_004228231.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bgf:BC1003_1568 Ku protein; SMART: Ku domain protein YP_004228232.1 PFAM: cytochrome P450; KEGG: bgf:BC1003_1566 cytochrome P450 YP_004228233.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: bpy:Bphyt_1855 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004228234.1 KEGG: bgf:BC1003_1564 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004228235.1 KEGG: bgf:BC1003_1563 hypothetical protein YP_004228236.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bgf:BC1003_1562 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004228237.1 PFAM: PfkB domain protein; KEGG: bgf:BC1003_1561 PfkB domain-containing protein YP_004228238.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; protein of unknown function UPF0004 ; deoxyribonuclease/rho motif-related TRAM; KEGG: bgf:BC1003_1560 MiaB-like tRNA modifying enzyme YliG; SMART: Elongator protein 3/MiaB/NifB YP_004228239.1 KEGG: bgl:bglu_1g15900 GP53 phage protein; PFAM: Resolvase domain; Recombinase; SMART: Resolvase domain YP_004228240.1 KEGG: taf:THA_1304 DNA topoisomerase I YP_004228241.1 KEGG: ptm:GSPATT00007985001 hypothetical protein YP_004228242.1 KEGG: cin:100182894 hypothetical protein LOC100182894 YP_004228244.1 KEGG: sro:Sros_3082 hypothetical protein YP_004228245.1 KEGG: aag:AaeL_AAEL012928 hypothetical protein YP_004228246.1 KEGG: nhl:Nhal_2265 hypothetical protein YP_004228247.1 KEGG: alv:Alvin_1709 hypothetical protein YP_004228248.1 KEGG: nfi:NFIA_078580 myosin type II heavy chain YP_004228249.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: reh:H16_B1573 plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein YP_004228250.1 KEGG: tgr:Tgr7_1985 hypothetical protein YP_004228251.1 KEGG: bgf:BC1003_2751 hypothetical protein YP_004228252.1 manually curated; KEGG: bgf:BC1003_2752 hypothetical protein YP_004228253.1 manually curated; KEGG: bgf:BC1003_2753 hypothetical protein YP_004228254.1 manually curated; KEGG: bgf:BC1003_2754 hypothetical protein YP_004228255.1 manually curated; KEGG: bgf:BC1003_2755 PaaR motif-containing protein YP_004228256.1 PFAM: protein of unknown function DUF72; KEGG: bcj:BCAM1883 hypothetical protein YP_004228257.1 KEGG: bge:BC1002_3703 hypothetical protein YP_004228258.1 manually curated; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA polymerase LigD, polymerase domain protein; KEGG: bph:Bphy_4772 DNA ligase D; PFAM: ATP dependent DNA ligase; DNA primase small subunit YP_004228259.1 PFAM: Protein of unknown function DUF2971; KEGG: hch:HCH_05640 hypothetical protein YP_004228260.1 SMART: HNH nuclease; KEGG: xca:xccb100_3105 hypothetical protein YP_004228261.1 SMART: HNH nuclease; KEGG: rer:RER_40460 hypothetical protein YP_004228262.1 SMART: ATPase AAA; KEGG: spc:Sputcn32_3206 ATPase YP_004228263.1 KEGG: cyc:PCC7424_0858 hypothetical protein YP_004228264.1 PFAM: restriction modification system DNA specificity domain; KEGG: eum:ECUMN_4957 EcoKI restriction-modification system protein HsdS YP_004228265.1 KEGG: tmz:Tmz1t_3600 site-specific DNA-methyltransferase (adenine-specific); PFAM: N-6 DNA methylase YP_004228266.1 PFAM: Protein of unknown function DUF3559; type III restriction protein res subunit; helicase domain protein; protein of unknown function DUF450; KEGG: tmz:Tmz1t_3601 type I restriction enzyme EcoKI subunit R; SMART: DEAD-like helicase YP_004228267.1 KEGG: bch:Bcen2424_2188 hypothetical protein YP_004228268.1 KEGG: bge:BC1002_1151 endoribonuclease L-PSP YP_004228270.1 KEGG: nfi:NFIA_009070 hypothetical protein YP_004228271.1 KEGG: osa:4332249 hypothetical protein YP_004228272.1 KEGG: bpl:BURPS1106A_3674 hypothetical protein YP_004228273.1 KEGG: bge:BC1002_0151 DNA binding domain protein, excisionase family YP_004228274.1 KEGG: spu:580528 amassin-3 YP_004228275.1 SMART: Toprim sub domain-containing protein; KEGG: syf:Synpcc7942_0727 hypothetical protein YP_004228276.1 KEGG: lth:KLTH0F06644g KLTH0F06644p YP_004228277.1 KEGG: gca:Galf_2036 phage transcriptional regulator, AlpA YP_004228278.1 KEGG: ctt:CtCNB1_3599 phage transcriptional regulator, AlpA; manually curated; PFAM: Prophage CP4-57 regulatory YP_004228279.1 KEGG: bgl:bglu_1g15150 GP52 YP_004228280.1 KEGG: saf:SULAZ_0390 hypothetical protein YP_004228281.1 PFAM: ATP-binding region ATPase domain protein; KEGG: ppw:PputW619_0031 hypothetical protein YP_004228282.1 KEGG: bgf:BC1003_1559 polyhydroxyalkonate synthesis repressor, PhaR; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein YP_004228283.1 KEGG: bgf:BC1003_1558 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004228284.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bgf:BC1003_1557 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004228285.1 KEGG: bgf:BC1003_1556 poly(R)-hydroxyalkanoic acid synthase, class I; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold YP_004228286.1 PFAM: protein of unknown function DUF152; KEGG: bgf:BC1003_1555 hypothetical protein YP_004228287.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bgf:BC1003_1554 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein YP_004228288.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: bgf:BC1003_1553 outer membrane assembly lipoprotein YfiO YP_004228289.1 KEGG: bgf:BC1003_1552 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: protein of unknown function Met10 YP_004228290.1 PFAM: 3'-5' exonuclease, PolB-like; KEGG: bgf:BC1003_1551 3'-5' exonuclease, PolB-like protein YP_004228291.1 KEGG: bgf:BC1003_1550 RNA polymerase, sigma 70 subunit, RpoD subfamily; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2 YP_004228292.1 KEGG: bgf:BC1003_1549 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004228293.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: bgf:BC1003_1548 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004228294.1 KEGG: bgf:BC1003_1547 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_004228295.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bgf:BC1003_1546 alcohol dehydrogenase zinc-binding domain-containing protein YP_004228296.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_1545 binding-protein-dependent transport systems inner membrane component YP_004228297.1 KEGG: bgf:BC1003_1544 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228298.1 KEGG: bgf:BC1003_1543 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_004228299.1 KEGG: bgf:BC1003_1542 formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_004228300.1 TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain-containing protein; KEGG: bgf:BC1003_1541 recombination protein RecR; SMART: Toprim sub domain-containing protein; Helix-hairpin-helix DNA-binding class 1 YP_004228301.1 PFAM: Uncharacterised protein family UPF0133; KEGG: bgf:BC1003_1540 hypothetical protein YP_004228302.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase AAA central domain protein; KEGG: bgf:BC1003_1539 DNA polymerase III subunits gamma and tau; SMART: ATPase AAA YP_004228303.1 KEGG: bgf:BC1003_1538 thioredoxin; TIGRFAM: thioredoxin; PFAM: thioredoxin YP_004228304.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: bpy:Bphyt_1824 transcription termination factor Rho; SMART: Cold shock protein; ATPase AAA YP_004228305.1 KEGG: bxe:Bxe_A2364 MerR family transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR YP_004228306.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2365 major facilitator superfamily multidrug efflux transporter YP_004228307.1 PFAM: protein of unknown function DUF980; KEGG: bgf:BC1003_1535 hypothetical protein YP_004228308.1 KEGG: bgf:BC1003_1534 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_004228309.1 KEGG: bgf:BC1003_1533 inner membrane protein YP_004228310.1 KEGG: bgf:BC1003_1532 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004228311.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bgf:BC1003_1531 carboxymuconolactone decarboxylase YP_004228312.1 KEGG: bgf:BC1003_1530 MerR family transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR YP_004228313.1 SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: bgf:BC1003_1529 DNA uptake protein, ComEA-like protein YP_004228314.1 PFAM: protein of unknown function DUF937; KEGG: bgf:BC1003_1528 hypothetical protein YP_004228315.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA central domain protein; Clp domain protein; Clp ATPase-like; KEGG: bgf:BC1003_1527 ATP-dependent chaperone ClpB; SMART: ATPase AAA YP_004228316.1 KEGG: bgf:BC1003_1526 BadM/Rrf2 family transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004228317.1 PFAM: globin; KEGG: bgf:BC1003_1525 globin YP_004228318.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: bgf:BC1003_1524 molybdopterin biosynthesis MoaE protein YP_004228319.1 KEGG: bgf:BC1003_1523 molybdopterin converting factor subunit 1; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_004228320.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: bgf:BC1003_1522 molybdenum cofactor synthesis domain-containing protein; SMART: molybdopterin binding domain YP_004228321.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bxe:Bxe_B0156 transposase YP_004228322.1 TIGRFAM: threonine synthase; KEGG: bgf:BC1003_1521 threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit YP_004228323.1 KEGG: bgf:BC1003_1520 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein YP_004228324.1 PFAM: aminotransferase class I and II; KEGG: bgf:BC1003_1519 class I/II aminotransferase YP_004228325.1 PFAM: protein of unknown function DUF498; KEGG: bgf:BC1003_1518 hypothetical protein YP_004228326.1 PFAM: glycosyl transferase family 39; KEGG: bgf:BC1003_1517 glycosyl transferase family 39 YP_004228327.1 PFAM: small multidrug resistance protein; KEGG: bpy:Bphyt_1802 small multidrug resistance transmembrane protein, DMT superfamily YP_004228328.1 KEGG: bgf:BC1003_1515 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_004228329.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_1514 glycosyl transferase family 2 YP_004228330.1 PFAM: formyl transferase domain protein; KEGG: bgf:BC1003_1513 formyl transferase domain-containing protein YP_004228331.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_1512 NAD-dependent epimerase/dehydratase YP_004228332.1 PFAM: polysaccharide deacetylase; KEGG: bgf:BC1003_1511 polysaccharide deacetylase YP_004228333.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bgf:BC1003_1510 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004228334.1 KEGG: bgf:BC1003_1509 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc YP_004228335.1 PFAM: NLP/P60 protein; KEGG: bgf:BC1003_1508 NLP/P60 protein YP_004228336.1 KEGG: bgf:BC1003_1507 RfaE bifunctional protein; TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein YP_004228337.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_1793 short-chain dehydrogenase/reductase SDR YP_004228338.1 PFAM: phosphate transporter; KEGG: bgf:BC1003_1505 phosphate transporter YP_004228339.1 PFAM: Putitive phosphate transport regulator; KEGG: bgf:BC1003_1504 phosphate transport regulator YP_004228340.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: bgf:BC1003_1503 replicative DNA helicase; SMART: ATPase AAA YP_004228341.1 KEGG: bgf:BC1003_1502 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_004228342.1 KEGG: bgf:BC1003_1501 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_004228343.1 KEGG: bgf:BC1003_1500 primosomal replication protein N, PriB YP_004228344.1 KEGG: bgf:BC1003_1499 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_004228345.1 KEGG: bge:BC1002_1357 transmembrane anti-sigma factor YP_004228346.1 KEGG: bxe:Bxe_A2458 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004228347.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1498 LysR family transcriptional regulator YP_004228348.1 KEGG: bgf:BC1003_1497 glyoxylate carboligase; TIGRFAM: glyoxylate carboligase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004228349.1 TIGRFAM: hydroxypyruvate isomerase; KEGG: bgf:BC1003_1496 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004228350.1 KEGG: bgf:BC1003_1495 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004228351.1 KEGG: bgf:BC1003_1494 peptidoglycan-binding lysin domain-containing protein; PFAM: Peptidoglycan-binding lysin domain; transport-associated; SMART: Peptidoglycan-binding LysM YP_004228352.1 TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; KEGG: bgf:BC1003_1493 L-asparaginase, type II; SMART: Asparaginase/glutaminase YP_004228353.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1492 LysR family transcriptional regulator YP_004228354.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bgf:BC1003_1491 sulfate ABC transporter ATPase subunit; SMART: ATPase AAA YP_004228355.1 KEGG: bgf:BC1003_1490 sulfate ABC transporter inner membrane subunit CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004228356.1 KEGG: bgf:BC1003_1489 sulfate ABC transporter inner membrane subunit CysT; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004228357.1 KEGG: bgf:BC1003_1488 sulfate ABC transporter periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004228358.1 KEGG: bgf:BC1003_1487 transcriptional repressor, LexA family; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region YP_004228359.1 KEGG: bgf:BC1003_1486 hypothetical protein YP_004228360.1 PFAM: Protein of unknown function DUF2939; KEGG: bgf:BC1003_1485 transmembrane protein YP_004228361.1 PFAM: UspA domain-containing protein; KEGG: bgf:BC1003_1484 UspA domain-containing protein YP_004228362.1 TIGRFAM: nodulation ABC transporter NodI; PFAM: ABC transporter related; KEGG: bgf:BC1003_1483 nodulation ABC transporter NodI; SMART: ATPase AAA YP_004228363.1 KEGG: bgf:BC1003_1482 ABC transporter NodJ family; TIGRFAM: ABC transporter, NodJ family; PFAM: ABC transporter YP_004228364.1 KEGG: bgf:BC1003_1481 hypothetical protein YP_004228365.1 PFAM: aldo/keto reductase; KEGG: bgf:BC1003_1480 aldo/keto reductase YP_004228366.1 KEGG: bxe:Bxe_A2479 cytoplasmic protein YP_004228367.1 KEGG: bgf:BC1003_1478 glycine-rich protein YP_004228368.1 manually curated; TIGRFAM: hypothetical protein; KEGG: bgf:BC1003_1472 hypothetical protein; PFAM: dihydrouridine synthase DuS YP_004228369.1 KEGG: bgf:BC1003_1471 hypothetical protein YP_004228370.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpy:Bphyt_1751 glyoxalase/bleomycin resistance protein/dioxygenase YP_004228371.1 KEGG: bgf:BC1003_1470 hypothetical protein YP_004228372.1 KEGG: bgf:BC1003_1469 hypothetical protein YP_004228373.1 KEGG: bgf:BC1003_1468 hypothetical protein YP_004228374.1 PFAM: TOBE domain-containing protein; KEGG: bxe:Bxe_A2490 molybdenum-pterin binding protein YP_004228375.1 KEGG: bgf:BC1003_1466 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228376.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_1465 binding-protein-dependent transport systems inner membrane component YP_004228377.1 TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent; KEGG: bpy:Bphyt_1744 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup YP_004228378.1 KEGG: bgf:BC1003_1463 transmembrane protein YP_004228379.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_1462 enoyl-CoA hydratase/isomerase YP_004228380.1 KEGG: bgf:BC1003_1461 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1488 YP_004228381.1 KEGG: bgf:BC1003_1460 hypothetical protein YP_004228382.1 KEGG: bgf:BC1003_1459 hypothetical protein YP_004228383.1 KEGG: bgf:BC1003_1458 hypothetical protein YP_004228384.1 PFAM: small multidrug resistance protein; KEGG: bgf:BC1003_1457 small multidrug resistance protein YP_004228385.1 PFAM: protein of unknown function DUF336; KEGG: bgf:BC1003_1456 hypothetical protein YP_004228386.1 PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: bxe:Bxe_A3644 activator/secretion protein YP_004228387.1 manually curated; KEGG: she:Shewmr4_2300 hypothetical protein YP_004228388.1 KEGG: bpl:BURPS1106A_3880 filamentous haemagglutinin/adhesin; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein YP_004228389.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_1454 NUDIX hydrolase YP_004228390.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: bgf:BC1003_1453 leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_004228391.1 PFAM: Arginine-tRNA-protein transferase domain protein; KEGG: bgf:BC1003_1452 arginine-tRNA-protein transferase domain-containing protein YP_004228392.1 PFAM: dihydroorotate oxidase; manually curated; KEGG: bpy:Bphyt_1730 dihydroorotate dehydrogenase 2; TIGRFAM: dihydroorotate dehydrogenase YP_004228393.1 KEGG: bgf:BC1003_1450 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004228394.1 KEGG: bgf:BC1003_1449 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004228395.1 PFAM: oxidoreductase domain protein; KEGG: bgf:BC1003_1448 oxidoreductase domain-containing protein YP_004228396.1 KEGG: bgf:BC1003_1447 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein YP_004228397.1 KEGG: bgf:BC1003_1446 flavin reductase domain-containing protein FMN-binding protein; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_004228398.1 PFAM: methyltransferase type 11; KEGG: bgf:BC1003_1445 methyltransferase type 11 YP_004228399.1 KEGG: bgf:BC1003_1444 alpha/beta superfamily hydrolase YP_004228400.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_1443 glycosyl transferase family 2 YP_004228401.1 PFAM: polysaccharide biosynthesis protein; KEGG: bgf:BC1003_1442 polysaccharide biosynthesis protein YP_004228402.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1441 glycosyl transferase group 1 YP_004228403.1 KEGG: bgf:BC1003_1440 NHL repeat containing protein YP_004228404.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1439 glycosyl transferase group 1 YP_004228405.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1438 glycosyl transferase group 1 YP_004228406.1 KEGG: bgf:BC1003_1437 transmembrane protein YP_004228407.1 KEGG: bgf:BC1003_1436 GNAT family acetyltransferase, ElaA YP_004228408.1 PFAM: phosphopantetheine-binding; KEGG: bgf:BC1003_1435 phosphopantetheine-binding protein YP_004228409.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_1434 acyl-CoA dehydrogenase domain-containing protein YP_004228410.1 KEGG: bgf:BC1003_1433 hypothetical protein YP_004228411.1 PFAM: Domain of unknown function DUF1839; KEGG: bgf:BC1003_1432 hypothetical protein YP_004228412.1 KEGG: bgf:BC1003_1431 glycoside hydrolase family 2 immunoglobulin domain-containing protein beta-sandwich YP_004228413.1 SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: bgf:BC1003_1430 Crp/Fnr family transcriptional regulator YP_004228414.1 KEGG: bgf:BC1003_1429 UDP-phosphate glucose phosphotransferase; TIGRFAM: UDP-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_004228415.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_1428 glycosyl transferase family 2 YP_004228416.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bgf:BC1003_1427 polysaccharide export protein YP_004228417.1 TIGRFAM: capsular exopolysaccharide family; KEGG: bgf:BC1003_1426 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_004228418.1 KEGG: bgf:BC1003_1425 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004228419.1 KEGG: cre:CHLREDRAFT_174475 hypothetical protein YP_004228420.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1424 glycosyl transferase group 1 YP_004228421.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_1423 glycosyl transferase group 1 YP_004228422.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: bgf:BC1003_1422 ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase YP_004228423.1 KEGG: bgf:BC1003_1421 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_004228424.1 SMART: Cold shock protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: bgf:BC1003_1420 ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain YP_004228425.1 PFAM: integrase family protein; KEGG: pfs:PFLU5079 integrase YP_004228426.1 PFAM: KAP P-loop domain protein; KEGG: reu:Reut_A2201 kap P-loop YP_004228427.1 KEGG: acp:A2cp1_1161 hypothetical protein YP_004228428.1 PFAM: Protein of unknown function DUF2471; KEGG: bxe:Bxe_B3023 hypothetical protein YP_004228429.1 PFAM: PilT protein domain protein; KEGG: bam:Bamb_5676 hypothetical protein YP_004228430.1 KEGG: bam:Bamb_5677 AbrB family transcriptional regulator; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein YP_004228431.1 KEGG: eba:ebA2442 hypothetical protein YP_004228432.1 KEGG: eba:ebA2443 hypothetical protein YP_004228433.1 KEGG: epy:EpC_11700 senescence marker protein-30 YP_004228434.1 KEGG: eba:ebA2448 hypothetical protein YP_004228435.1 KEGG: bcm:Bcenmc03_6931 hypothetical protein YP_004228436.1 KEGG: bcm:Bcenmc03_6930 hypothetical protein YP_004228437.1 KEGG: avi:Avi_6043 hypothetical protein YP_004228438.1 PFAM: AAA-4 family protein; KEGG: mno:Mnod_5398 transcriptional regulator YP_004228439.1 KEGG: wsu:WS2053 hypothetical protein YP_004228440.1 PFAM: Prophage CP4-57 regulatory; KEGG: hha:Hhal_1156 phage transcriptional regulator, AlpA YP_004228441.1 KEGG: tmz:Tmz1t_0962 hypothetical protein YP_004228442.1 KEGG: ngk:NGK_1090 TraD YP_004228443.1 KEGG: eba:ebA387 hypothetical protein; PFAM: Relaxase; protein of unknown function DUF1528; SMART: metal-dependent phosphohydrolase HD region YP_004228445.1 PFAM: Lytic transglycosylase catalytic; KEGG: bge:BC1002_6986 lytic transglycosylase catalytic YP_004228446.1 PFAM: type II secretion system protein E; KEGG: rpf:Rpic12D_5421 type II secretion system protein E YP_004228447.1 KEGG: bge:BC1002_6979 hypothetical protein YP_004228448.1 PFAM: type IV secretory pathway VirB3 family protein; KEGG: bge:BC1002_6978 type IV secretory pathway VirB3 family protein YP_004228449.1 KEGG: rpi:Rpic_5013 type IV secretory pathway VirB4 protein-like protein YP_004228450.1 KEGG: rpf:Rpic12D_5417 hypothetical protein YP_004228451.1 KEGG: rpf:Rpic12D_5416 hypothetical protein YP_004228452.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: rpf:Rpic12D_5415 TrbL/VirB6 plasmid conjugal transfer protein YP_004228453.1 KEGG: xce:Xcel_2912 binding-protein-dependent transport systems inner membrane component YP_004228454.1 manually curated; KEGG: rpf:Rpic12D_5414 hypothetical protein YP_004228455.1 PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: rpf:Rpic12D_5413 conjugal transfer protein TrbG/VirB9/CagX YP_004228456.1 PFAM: conjugation TrbI family protein; KEGG: rpf:Rpic12D_5412 conjugation TrbI family protein YP_004228457.1 PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bgl:bglu_2g07070 lytic transglycosylase, catalytic YP_004228458.1 KEGG: reh:PHG148 hypothetical protein YP_004228459.1 KEGG: dac:Daci_2303 hypothetical protein YP_004228460.1 KEGG: eay:EAM_2245 plasmid-related protein YP_004228461.1 KEGG: swi:Swit_4943 hypothetical protein YP_004228462.1 KEGG: swi:Swit_4942 hypothetical protein YP_004228463.1 PFAM: Protein of unknown function DUF2241; KEGG: bac:BamMC406_1874 hypothetical protein YP_004228465.1 KEGG: rme:Rmet_0965 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004228466.1 PFAM: Protein of unknown function DUF3577; KEGG: pfo:Pfl01_3003 hypothetical protein YP_004228467.1 PFAM: Antirestriction protein; KEGG: lpp:plpp0047 hypothetical protein YP_004228468.1 KEGG: pol:Bpro_0005 hypothetical protein YP_004228469.1 KEGG: ajs:Ajs_1291 hypothetical protein YP_004228470.1 PFAM: Protein of unknown function DUF3275; KEGG: azo:azo2037 hypothetical protein YP_004228471.1 KEGG: gpb:HDN1F_35380 conserved hypothetical plasmid protein YP_004228472.1 KEGG: pic:PICST_83901 hypothetical protein YP_004228473.1 KEGG: aav:Aave_2700 hypothetical protein YP_004228474.1 KEGG: bpt:Bpet1323 hypothetical protein; PFAM: SNF2-related protein; SMART: DEAD-like helicase ; Helix-hairpin-helix DNA-binding class 1 YP_004228475.1 PFAM: Protein of unknown function DUF3085; KEGG: pwa:Pecwa_1653 hypothetical protein YP_004228476.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rpi:Rpic_5005 conjugal transfer protein TraB YP_004228477.1 manually curated; KEGG: bph:Bphy_7284 hypothetical protein YP_004228478.1 KEGG: bpy:Bphyt_0264 hypothetical protein YP_004228479.1 KEGG: gpb:HDN1F_22950 hypothetical protein YP_004228480.1 KEGG: bge:BC1002_4307 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004228481.1 KEGG: bfa:Bfae_03000 hypothetical protein YP_004228482.1 PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: msm:MSMEG_4701 hypothetical protein YP_004228483.1 KEGG: mpt:Mpe_A2916 ATP-dependent transcriptional regulator-like protein protein YP_004228484.1 KEGG: eba:ebA371 hypothetical protein; TIGRFAM: Domain of unknown function DUF1845; PFAM: Domain of unknown function DUF1845 YP_004228485.1 KEGG: aav:Aave_2681 hypothetical protein YP_004228486.1 KEGG: btl:BALH_p0019 hypothetical protein YP_004228487.1 KEGG: ach:Achl_2791 hypothetical protein YP_004228488.1 PFAM: ParB domain protein nuclease; KEGG: bph:Bphy_7414 cobyrinic acid ac-diamide synthase YP_004228489.1 KEGG: bph:Bphy_7414 cobyrinic acid ac-diamide synthase YP_004228490.1 KEGG: bph:Bphy_7415 hypothetical protein YP_004228491.1 KEGG: bph:Bphy_7416 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004228492.1 KEGG: bph:Bphy_7417 hypothetical protein YP_004228493.1 PFAM: fatty acid desaturase; KEGG: bph:Bphy_7418 fatty acid desaturase YP_004228494.1 KEGG: bph:Bphy_7419 hypothetical protein YP_004228495.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bph:Bphy_1238 lysine exporter protein LysE/YggA YP_004228496.1 KEGG: bph:Bphy_3167 hypothetical protein YP_004228497.1 KEGG: bph:Bphy_7420 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding YP_004228498.1 KEGG: bvi:Bcep1808_6680 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein YP_004228499.1 KEGG: bvi:Bcep1808_6679 hypothetical protein YP_004228500.1 KEGG: bge:BC1002_6970 aldehyde dehydrogenase (NAD(+)); manually curated; PFAM: Aldehyde Dehydrogenase YP_004228501.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: bge:BC1002_6969 protein of unknown function DUF861 cupin_3 YP_004228502.1 PFAM: nitroreductase; KEGG: bge:BC1002_5853 nitroreductase YP_004228503.1 KEGG: bge:BC1002_6966 transcriptional regulator, LysR family; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_004228504.1 KEGG: bge:BC1002_6965 flavin reductase domain protein FMN-binding protein; manually curated; PFAM: flavin reductase domain protein FMN-binding YP_004228505.1 KEGG: bge:BC1002_6964 xenobiotic compound DszA family monooxygenase; TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; PFAM: Luciferase-like, subgroup YP_004228506.1 PFAM: major facilitator superfamily MFS_1; KEGG: bge:BC1002_6963 major facilitator superfamily MFS_1 YP_004228507.1 PFAM: FAD dependent oxidoreductase; KEGG: bge:BC1002_6962 FAD dependent oxidoreductase YP_004228508.1 PFAM: peptidase C26; KEGG: bte:BTH_I1617 glutamine amidotransferase, class I YP_004228509.1 PFAM: porin Gram-negative type; KEGG: bge:BC1002_6959 porin gram-negative type YP_004228510.1 KEGG: bge:BC1002_6958 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004228511.1 KEGG: bge:BC1002_6957 general substrate transporter YP_004228512.1 PFAM: FAD dependent oxidoreductase; KEGG: bge:BC1002_6953 FAD dependent oxidoreductase YP_004228513.1 KEGG: uma:UM02053.1 hypothetical protein YP_004228514.1 PFAM: Amidase; KEGG: azc:AZC_2624 amidase YP_004228515.1 KEGG: pfl:PFL_5626 peptide ABC transporter, permease protein; manually curated; PFAM: binding-protein-dependent transport systems inner membrane component YP_004228516.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_5625 peptide ABC transporter, permease protein YP_004228517.1 KEGG: rlt:Rleg2_6327 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_004228518.1 PFAM: transposase IS4 family protein; KEGG: bph:Bphy_4916 transposase IS4 family protein YP_004228519.1 PFAM: extracellular solute-binding protein family 5; KEGG: jan:Jann_3816 twin-arginine translocation pathway signal YP_004228520.1 KEGG: bph:Bphy_7420 chromosome replication initiation inhibitor protein YP_004228521.1 KEGG: bph:Bphy_3167 hypothetical protein YP_004228522.1 KEGG: bph:Bphy_7420 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding YP_004228523.1 manually curated; KEGG: bph:Bphy_3167 hypothetical protein YP_004228524.1 KEGG: bxe:Bxe_B1570 hypothetical protein YP_004228525.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_4404 mandelate racemase/muconate lactonizing enzyme YP_004228526.1 KEGG: bph:Bphy_7494 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004228527.1 PFAM: Endoribonuclease L-PSP; KEGG: mch:Mchl_4389 endoribonuclease L-PSP YP_004228528.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bmj:BMULJ_05522 uncharacterized NAD(FAD)-dependent dehydrogenase YP_004228529.1 KEGG: bph:Bphy_7054 hypothetical protein YP_004228530.1 PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B2706 FAD dependent oxidoreductase YP_004228531.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bge:BC1002_5786 transcriptional regulator, LysR family YP_004228532.1 KEGG: bcj:BCAM0759 periplasmic lysine-arginine-ornithine-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004228533.1 KEGG: bxe:Bxe_A2927 ABC lysine/arginine/ornithine transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004228534.1 KEGG: bxe:Bxe_A2926 ABC lysine/arginine/ornithine transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004228535.1 KEGG: bgf:BC1003_2161 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228536.1 manually curated; KEGG: ecy:ECSE_P3-0038 hypothetical protein YP_004228537.1 KEGG: bmj:BMULJ_04537 diaminopropionate ammonia-lyase; TIGRFAM: diaminopropionate ammonia-lyase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit YP_004228538.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bvi:Bcep1808_6695 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004228539.1 TIGRFAM: amidohydrolase; KEGG: bch:Bcen2424_5628 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004228540.1 KEGG: bam:Bamb_4909 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004228541.1 PFAM: Extracellular ligand-binding receptor; KEGG: bvi:Bcep1808_6691 extracellular ligand-binding receptor YP_004228542.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bvi:Bcep1808_6707 LysR family transcriptional regulator YP_004228543.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_6706 major facilitator transporter YP_004228544.1 KEGG: bvi:Bcep1808_6705 hypothetical protein YP_004228545.1 KEGG: bvi:Bcep1808_6704 AraC family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_004228546.1 PFAM: amino acid permease-associated region; KEGG: bvi:Bcep1808_6703 amino acid permease-associated region YP_004228547.1 PFAM: aminotransferase class I and II; KEGG: bvi:Bcep1808_6702 aminotransferase, class I and II YP_004228548.1 KEGG: bph:Bphy_3927 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004228549.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bge:BC1002_6995 cupin 2 conserved barrel domain protein YP_004228550.1 PFAM: aminotransferase class V; KEGG: bge:BC1002_6996 aminotransferase class V YP_004228551.1 PFAM: major facilitator superfamily MFS_1; KEGG: bge:BC1002_6997 major facilitator superfamily MFS_1 YP_004228552.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bge:BC1002_6998 peptidase M20 YP_004228553.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bge:BC1002_6999 transcriptional regulator, LysR family YP_004228554.1 PFAM: porin Gram-negative type; KEGG: bge:BC1002_7000 porin gram-negative type YP_004228555.1 KEGG: bge:BC1002_7001 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004228556.1 KEGG: bge:BC1002_7002 kynureninase; TIGRFAM: kynureninase; PFAM: aminotransferase class V YP_004228557.1 KEGG: bge:BC1002_7003 hypothetical protein YP_004228558.1 SMART: Helix-turn-helix, AraC domain; KEGG: bge:BC1002_7004 helix-turn-helix, AraC domain protein YP_004228559.1 PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bge:BC1002_7005 oxidoreductase FAD-binding domain protein YP_004228560.1 TIGRFAM: anthranilate 1,2-dioxygenase, small subunit; KEGG: bge:BC1002_7006 anthranilate 1,2-dioxygenase, small subunit; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit YP_004228561.1 KEGG: bge:BC1002_7007 anthranilate 1,2-dioxygenase, large subunit; TIGRFAM: anthranilate 1,2-dioxygenase, large subunit; PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; Rieske [2Fe-2S] iron-sulphur domain YP_004228562.1 PFAM: amidohydrolase 2; KEGG: bgf:BC1003_5360 amidohydrolase 2 YP_004228563.1 KEGG: bph:Bphy_1156 glutamine ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004228564.1 KEGG: bph:Bphy_1155 glutamine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004228565.1 KEGG: bph:Bphy_1154 glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228566.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: rsl:RPSI07_1320 conserved hypothethical protein YP_004228567.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rsl:RPSI07_1319 conserved hypothethical protein YP_004228568.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: afw:Anae109_3251 deaminase-reductase domain-containing protein YP_004228569.1 KEGG: bgf:BC1003_3582 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH YP_004228570.1 KEGG: bac:BamMC406_1254 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228571.1 PFAM: inner-membrane translocator; KEGG: bac:BamMC406_1253 monosaccharide-transporting ATPase YP_004228572.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_5473 periplasmic binding protein/LacI transcriptional regulator YP_004228573.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bpy:Bphyt_5476 alcohol dehydrogenase GroES domain protein YP_004228574.1 PFAM: Mannitol dehydrogenase domain; KEGG: bpy:Bphyt_5477 mannitol dehydrogenase domain YP_004228575.1 SMART: beta-lactamase domain protein; KEGG: bpy:Bphyt_5423 beta-lactamase domain protein YP_004228576.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_4429 major facilitator transporter YP_004228577.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bph:Bphy_4430 succinylglutamate desuccinylase/aspartoacylase YP_004228578.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_4431 LysR family transcriptional regulator YP_004228579.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_2054 alpha/beta hydrolase fold protein YP_004228580.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: bgf:BC1003_2055 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; histidine kinase A domain protein YP_004228581.1 KEGG: bgf:BC1003_1362 malonate transporter MadL subunit; TIGRFAM: malonate transporter, MadL subunit; PFAM: malonate transporter MadL subunit YP_004228582.1 KEGG: bgf:BC1003_1361 malonate transporter MadM subunit; TIGRFAM: malonate transporter, MadM subunit; PFAM: Malonate/sodium symporter MadM subunit-like YP_004228583.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1360 LysR family transcriptional regulator YP_004228584.1 KEGG: bgf:BC1003_1359 hypothetical protein YP_004228585.1 KEGG: bgf:BC1003_1358 hypothetical protein YP_004228586.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bgf:BC1003_1357 molybdopterin oxidoreductase YP_004228587.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bgf:BC1003_1356 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004228588.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: bgf:BC1003_1355 nitrite reductase (NAD(P)H) small subunit YP_004228589.1 KEGG: bgf:BC1003_1354 nitrite reductase (NAD(P)H) large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_004228590.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1353 major facilitator superfamily protein YP_004228591.1 PFAM: Protein of unknown function DUF3579; KEGG: bgf:BC1003_1352 hypothetical protein YP_004228592.1 KEGG: bgf:BC1003_1351 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_004228593.1 KEGG: bgf:BC1003_1350 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004228594.1 PFAM: citrate carrier protein; KEGG: bgf:BC1003_1349 citrate carrier protein YP_004228595.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_1348 short-chain dehydrogenase/reductase SDR YP_004228596.1 KEGG: bgf:BC1003_1347 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004228597.1 KEGG: bgf:BC1003_3560 aliphatic sulfonates family ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_004228598.1 KEGG: bgf:BC1003_1346 3-demethylubiquinone-9 3-methyltransferase family protein YP_004228599.1 KEGG: bgf:BC1003_1345 SSS sodium solute transporter superfamily; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004228600.1 PFAM: protein of unknown function DUF485; KEGG: bgf:BC1003_1344 hypothetical protein YP_004228601.1 KEGG: bgf:BC1003_1343 peroxiredoxin, Ohr subfamily; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_004228602.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_1342 regulatory protein TetR YP_004228603.1 KEGG: bgf:BC1003_1341 hypothetical protein YP_004228604.1 KEGG: bgf:BC1003_1340 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004228605.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_1339 AMP-dependent synthetase and ligase YP_004228606.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_1338 binding-protein-dependent transport systems inner membrane component YP_004228607.1 KEGG: bgf:BC1003_1337 ABC transporter; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: ATPase AAA YP_004228608.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_1336 extracellular solute-binding protein family 1 YP_004228609.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_1335 enoyl-CoA hydratase/isomerase YP_004228610.1 KEGG: bxe:Bxe_C0361 response regulator receiver domain-containing protein YP_004228611.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_1334 glycosyl transferase family 2 YP_004228612.1 KEGG: bgf:BC1003_1333 hypothetical protein YP_004228613.1 PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B1919 major facilitator superfamily transporter AAHS family protein YP_004228614.1 PFAM: Protein of unknown function DUF3303; KEGG: bph:Bphy_1550 hypothetical protein YP_004228615.1 KEGG: bgf:BC1003_1314 GMP synthase large subunit; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I YP_004228616.1 KEGG: bgf:BC1003_1313 hypothetical protein YP_004228617.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: bgf:BC1003_1312 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_004228618.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_1311 hypothetical protein YP_004228619.1 PFAM: protein of unknown function UPF0125; KEGG: bgf:BC1003_1310 hypothetical protein YP_004228620.1 PFAM: cyclase/dehydrase; KEGG: bgf:BC1003_1309 cyclase/dehydrase YP_004228621.1 KEGG: bgf:BC1003_1308 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_004228622.1 KEGG: bgf:BC1003_1307 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein YP_004228623.1 PFAM: protein of unknown function DUF107; KEGG: bgf:BC1003_1306 hypothetical protein YP_004228624.1 KEGG: bgf:BC1003_1305 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilizing protein; PEP-utilising protein mobile region YP_004228625.1 PFAM: protein of unknown function DUF299; KEGG: bxe:Bxe_A1698 hypothetical protein YP_004228626.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bxe:Bxe_A1697 RNA methylase YP_004228627.1 KEGG: bgf:BC1003_1302 ribonuclease H; PFAM: ribonuclease HII/HIII YP_004228628.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: bgf:BC1003_1301 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_004228629.1 KEGG: bgf:BC1003_1300 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase; TIGRFAM: acyl-[ACP]--UDP-N-acetylglucosamine O-acyltransferase YP_004228630.1 KEGG: bgf:BC1003_1299 beta-hydroxyacyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-ACP dehydratase; PFAM: beta-hydroxyacyl-ACP dehydratase YP_004228631.1 KEGG: bgf:BC1003_1298 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_004228632.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: bpy:Bphyt_2446 outer membrane chaperone Skp (OmpH) YP_004228633.1 KEGG: bgf:BC1003_1296 outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein YP_004228634.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: bgf:BC1003_1295 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein YP_004228635.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: bgf:BC1003_1294 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein YP_004228636.1 PFAM: phosphatidate cytidylyltransferase; KEGG: bgf:BC1003_1293 phosphatidate cytidylyltransferase YP_004228637.1 TIGRFAM: UDP diphosphate synthase; KEGG: bgf:BC1003_1292 UDP diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_004228638.1 KEGG: bpy:Bphyt_2452 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_004228639.1 KEGG: bgf:BC1003_1290 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004228640.1 KEGG: bgf:BC1003_1289 translation elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_004228641.1 KEGG: bgf:BC1003_1288 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_004228642.1 KEGG: bgf:BC1003_1287 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_004228643.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: bgf:BC1003_1286 UTP-GlnB uridylyltransferase, GlnD; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain YP_004228644.1 KEGG: mmu:100039562 predicted gene 2312 YP_004228645.1 KEGG: bxe:Bxe_A1678 pseudouridine synthase, Rsu; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004228646.1 TIGRFAM: peptide deformylase; KEGG: bgf:BC1003_1284 peptide deformylase; PFAM: formylmethionine deformylase YP_004228647.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: bgf:BC1003_1283 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; NAD-dependent DNA ligase OB-fold YP_004228648.1 KEGG: bgf:BC1003_1282 ZipA FtsZ-binding region protein; PFAM: ZipA FtsZ-binding region protein; SMART: ZipA FtsZ-binding region protein YP_004228649.1 KEGG: bgf:BC1003_1281 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain-containing protein YP_004228650.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_A1673 DMT family permease YP_004228651.1 KEGG: ang:An11g00150 hypothetical protein YP_004228652.1 KEGG: bgf:BC1003_1278 succinyldiaminopimelate transaminase; TIGRFAM: succinyldiaminopimelate transaminase; PFAM: aminotransferase class I and II YP_004228653.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: bxe:Bxe_A1670 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004228654.1 PFAM: arsenate reductase and related; KEGG: bgf:BC1003_1276 arsenate reductase YP_004228655.1 KEGG: bgf:BC1003_1275 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004228656.1 KEGG: bgf:BC1003_1274 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004228657.1 KEGG: bgf:BC1003_1273 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004228658.1 KEGG: bgf:BC1003_1272 peroxiredoxin; PFAM: glutathione peroxidase YP_004228659.1 KEGG: bgf:BC1003_1271 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228660.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bgf:BC1003_1270 L-carnitine dehydratase/bile acid-inducible protein F YP_004228661.1 KEGG: bgf:BC1003_1269 hypothetical protein YP_004228662.1 KEGG: bpy:Bphyt_2476 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase AAA YP_004228663.1 TIGRFAM: alanine racemase; KEGG: bgf:BC1003_1267 alanine racemase; PFAM: alanine racemase domain protein YP_004228664.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1266 major facilitator superfamily protein YP_004228665.1 KEGG: bgf:BC1003_1265 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_004228666.1 PFAM: Domain of unknown function DUF1853; KEGG: bgf:BC1003_1264 hypothetical protein YP_004228667.1 KEGG: bgf:BC1003_1263 phage SPO1 DNA polymerase-related protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase YP_004228668.1 KEGG: bgf:BC1003_1262 ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004228669.1 PFAM: peptidase M22; KEGG: bgf:BC1003_1261 peptidase M22 YP_004228670.1 PFAM: acyl-coA-binding protein ACBP; KEGG: bxe:Bxe_A1653 acyl-CoA-binding protein YP_004228671.1 KEGG: bgf:BC1003_1259 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004228672.1 KEGG: bgf:BC1003_1258 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_004228673.1 PFAM: UspA domain-containing protein; KEGG: bgf:BC1003_1257 UspA domain-containing protein YP_004228674.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1256 LysR family transcriptional regulator YP_004228675.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); KEGG: bgf:BC1003_1255 haloacid dehalogenase, type II; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004228676.1 TIGRFAM: malate synthase A; KEGG: bgf:BC1003_1254 malate synthase A; PFAM: Malate synthase family protein YP_004228677.1 PFAM: AIG2 family protein; KEGG: bgf:BC1003_1253 AIG2 family protein YP_004228678.1 KEGG: bgf:BC1003_1252 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004228679.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_1251 GCN5-related N-acetyltransferase YP_004228680.1 KEGG: bgf:BC1003_1250 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004228681.1 PFAM: Patatin; KEGG: bgf:BC1003_1249 patatin YP_004228682.1 PFAM: NLP/P60 protein; KEGG: bgf:BC1003_1248 NLP/P60 protein YP_004228683.1 KEGG: bgf:BC1003_1247 ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_004228684.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_1246 binding-protein-dependent transport systems inner membrane component YP_004228685.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_1245 binding-protein-dependent transport systems inner membrane component YP_004228686.1 PFAM: extracellular solute-binding protein family 5; KEGG: bgf:BC1003_1244 extracellular solute-binding protein family 5 YP_004228687.1 KEGG: bgf:BC1003_1243 hypothetical protein YP_004228688.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5790 major facilitator superfamily protein YP_004228689.1 PFAM: glycoside hydrolase family 31; KEGG: bgf:BC1003_5789 glycoside hydrolase family 31 YP_004228690.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_5788 porin gram-negative type YP_004228691.1 KEGG: bmj:BMULJ_01948 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH YP_004228692.1 KEGG: bam:Bamb_1960 oxidoreductase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004228693.1 KEGG: bcj:BCAL2050 4Fe-4S ferredoxin YP_004228694.1 SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: bmj:BMULJ_01954 phycobiliprotein YP_004228695.1 KEGG: bmj:BMULJ_01955 hypothetical protein YP_004228696.1 PFAM: methyltransferase type 11; KEGG: bgf:BC1003_1242 methyltransferase type 11 YP_004228697.1 KEGG: bgf:BC1003_1239 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_004228698.1 KEGG: bgf:BC1003_1238 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase YP_004228699.1 KEGG: bgf:BC1003_1237 acetyl-CoA carboxylase, carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_004228700.1 KEGG: bgf:BC1003_1236 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; Helix-hairpin-helix DNA-binding class 1 YP_004228701.1 SMART: Cysteinyl-tRNA synthetase class Ia DALR; TIGRFAM: cysteinyl-tRNA synthetase; KEGG: bgf:BC1003_1235 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_004228702.1 KEGG: bgf:BC1003_1234 tetratricopeptide repeat-containing protein YP_004228703.1 KEGG: bgf:BC1003_1233 peptidylprolyl isomerase; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004228704.1 KEGG: bgf:BC1003_1232 peptidylprolyl isomerase; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004228705.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; KEGG: bgf:BC1003_1231 UDP-2,3-diacylglucosamine hydrolase YP_004228706.1 TIGRFAM: serine O-acetyltransferase; KEGG: bgf:BC1003_1230 serine O-acetyltransferase YP_004228707.1 KEGG: bgf:BC1003_1229 RNA methyltransferase, TrmH family, group 1; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004228708.1 PFAM: inositol monophosphatase; KEGG: bgf:BC1003_1228 inositol monophosphatase YP_004228709.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1227 major facilitator superfamily protein YP_004228710.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: bgf:BC1003_1226 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_004228711.1 KEGG: bgf:BC1003_1225 hypothetical protein YP_004228712.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bgf:BC1003_1224 FKBP-type peptidyl-prolyl cis-transisomerase (rotamase) YP_004228713.1 SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: bgf:BC1003_1223 transcription factor jumonji JmjC domain-containing protein YP_004228714.1 SMART: helicase c2; DEAD-like helicase; KEGG: bgf:BC1003_1222 helicase C2 YP_004228715.1 PFAM: protein of unknown function DUF465; KEGG: bgf:BC1003_1221 hypothetical protein YP_004228716.1 KEGG: bpy:Bphyt_2526 conserved hypothetical lipoprotein YP_004228717.1 KEGG: bgf:BC1003_1218 Tex-like protein protein-like protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Helix-hairpin-helix DNA-binding class 1 YP_004228718.1 PFAM: K potassium transporter; KEGG: bgf:BC1003_1217 potassium transporter YP_004228719.1 PFAM: phosphoribosyltransferase; KEGG: bgf:BC1003_1216 phosphoribosyltransferase YP_004228720.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: bgf:BC1003_1215 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_004228721.1 TIGRFAM: histidyl-tRNA synthetase 2; KEGG: bgf:BC1003_1214 histidyl-tRNA synthetase 2 YP_004228722.1 PFAM: Protein of unknown function DUF2065; KEGG: bgf:BC1003_1213 hypothetical protein YP_004228723.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: bgf:BC1003_1212 band 7 protein; SMART: band 7 protein YP_004228724.1 TIGRFAM: HflK protein; PFAM: band 7 protein; Protein HflK-like; KEGG: bgf:BC1003_1211 HflK protein; SMART: band 7 protein YP_004228725.1 KEGG: bgf:BC1003_1210 GTP-binding protein HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004228726.1 KEGG: bgf:BC1003_1209 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_004228727.1 TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: bgf:BC1003_1208 ribosome-associated GTPase EngA; SMART: ATPase AAA YP_004228728.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat-containing protein; KEGG: bgf:BC1003_1207 outer membrane assembly lipoprotein YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_004228729.1 PFAM: Protein of unknown function DUF2133; KEGG: bpy:Bphyt_2539 hypothetical protein YP_004228730.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: bgf:BC1003_1205 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_004228731.1 KEGG: bgf:BC1003_1204 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_004228732.1 SMART: helix-turn-helix domain protein; KEGG: bgf:BC1003_1203 XRE family transcriptional regulator YP_004228733.1 KEGG: bgf:BC1003_1202 radical SAM protein; TIGRFAM: radical SAM protein; PFAM: Radical SAM domain protein YP_004228734.1 PFAM: nucleoside diphosphate kinase; KEGG: bgf:BC1003_1201 nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase YP_004228735.1 PFAM: protein of unknown function UPF0005; KEGG: bgf:BC1003_1200 hypothetical protein YP_004228736.1 KEGG: bpy:Bphyt_2546 beta-lactamase domain protein YP_004228737.1 KEGG: bgf:BC1003_1198 lipoprotein YP_004228738.1 TIGRFAM: dihydrodipicolinate synthase; KEGG: bgf:BC1003_1197 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004228739.1 PFAM: protein of unknown function DUF938; KEGG: bgf:BC1003_1196 methyltransferase type 11 YP_004228740.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: bgf:BC1003_1195 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_004228741.1 PFAM: peptidase M50; KEGG: bgf:BC1003_1194 peptidase M50 YP_004228742.1 KEGG: bgf:BC1003_1193 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_004228743.1 KEGG: bgf:BC1003_1192 PHP domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004228744.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_1191 alpha/beta hydrolase fold protein YP_004228745.1 PFAM: protein of unknown function DUF455; KEGG: bgf:BC1003_1190 hypothetical protein YP_004228746.1 KEGG: bgf:BC1003_1189 transferase hexapeptide repeat containing protein YP_004228747.1 PFAM: Hsp33 protein; KEGG: bgf:BC1003_1188 HSP33 protein YP_004228748.1 KEGG: bgf:BC1003_1187 lipoprotein YP_004228749.1 PFAM: Septum formation initiator; KEGG: bgf:BC1003_1186 septum formation initiator YP_004228750.1 TIGRFAM: enolase; KEGG: bgf:BC1003_1185 enolase; PFAM: Enolase-like YP_004228751.1 KEGG: bgf:BC1003_1184 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004228752.1 TIGRFAM: CTP synthase; KEGG: bgf:BC1003_1183 CTP synthase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_004228753.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_1182 alpha/beta hydrolase fold protein YP_004228754.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: bgf:BC1003_1181 DNA internalization-related competence protein ComEC/Rec2; SMART: beta-lactamase domain protein YP_004228755.1 PFAM: TatD-related deoxyribonuclease; KEGG: bgf:BC1003_1180 TatD-related deoxyribonuclease YP_004228756.1 TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: bgf:BC1003_1179 lipoprotein releasing system, ATP-binding protein; SMART: ATPase AAA YP_004228757.1 KEGG: bgf:BC1003_1178 lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_004228758.1 KEGG: bxe:Bxe_A1565 hypothetical protein YP_004228759.1 KEGG: bgf:BC1003_1176 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_004228760.1 manually curated; KEGG: bpm:BURPS1710b_3602 hypothetical protein YP_004228761.1 KEGG: bgf:BC1003_1174 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004228762.1 KEGG: bgf:BC1003_1173 17 kDa surface antigen YP_004228763.1 KEGG: bpy:Bphyt_2573 FeS assembly protein IscX; TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528 YP_004228764.1 KEGG: bgf:BC1003_1171 ferredoxin, 2Fe-2S type, ISC system; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin YP_004228765.1 KEGG: bgf:BC1003_1170 Fe-S protein assembly chaperone HscA; TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70 YP_004228766.1 TIGRFAM: co-chaperone Hsc20; PFAM: HSC20 oligomerisation; heat shock protein DnaJ domain protein; KEGG: bgf:BC1003_1169 co-chaperone Hsc20; SMART: heat shock protein DnaJ domain protein YP_004228767.1 KEGG: bgf:BC1003_1168 iron-sulfur cluster assembly protein IscA; TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004228768.1 KEGG: bgf:BC1003_1167 FeS cluster assembly scaffold IscU; TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein YP_004228769.1 KEGG: bgf:BC1003_1166 cysteine desulfurase IscS; TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V YP_004228770.1 KEGG: bgf:BC1003_1165 BadM/Rrf2 family transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004228771.1 KEGG: bgf:BC1003_1164 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004228772.1 KEGG: bgf:BC1003_1163 hypothetical protein YP_004228773.1 KEGG: bgf:BC1003_1162 hypothetical protein YP_004228774.1 PFAM: protein of unknown function DUF162; KEGG: bgf:BC1003_1161 hypothetical protein YP_004228775.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bgf:BC1003_1160 hypothetical protein YP_004228776.1 KEGG: bgf:BC1003_1159 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004228777.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bgf:BC1003_1158 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_004228778.1 KEGG: bgf:BC1003_1156 phasin family protein; TIGRFAM: phasin family protein; PFAM: Phasin YP_004228779.1 KEGG: bgf:BC1003_1155 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; biotin/lipoyl attachment domain-containing protein YP_004228780.1 KEGG: bgf:BC1003_1154 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004228781.1 KEGG: bgf:BC1003_1153 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain-containing protein YP_004228782.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bgf:BC1003_1152 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_004228783.1 KEGG: bgf:BC1003_1151 LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004228784.1 KEGG: bgf:BC1003_1150 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004228785.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bxe:Bxe_B0156 transposase YP_004228786.1 PFAM: acyltransferase 3; KEGG: bgf:BC1003_1149 acyltransferase 3 YP_004228787.1 KEGG: bgf:BC1003_1148 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_004228788.1 PFAM: Amidohydrolase 3; KEGG: bgf:BC1003_1147 amidohydrolase 3 YP_004228789.1 KEGG: bpy:Bphyt_2599 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004228790.1 KEGG: rso:RSc2281 hypothetical protein YP_004228791.1 KEGG: bpy:Bphyt_3016 hypothetical protein YP_004228792.1 KEGG: bgf:BC1003_1144 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_004228793.1 KEGG: bgf:BC1003_1143 prolyl oligopeptidase; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller YP_004228794.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: bgf:BC1003_1142 two component, sigma54 specific, transcriptional regulator, fis family; SMART: response regulator receiver; ATPase AAA YP_004228795.1 KEGG: bgf:BC1003_1141 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004228796.1 KEGG: bgf:BC1003_1140 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_004228797.1 KEGG: bgf:BC1003_1139 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004228798.1 KEGG: bgf:BC1003_1138 molybdopterin-binding domain-containing protein; PFAM: molybdopterin binding domain; SMART: molybdopterin binding domain YP_004228799.1 KEGG: bgf:BC1003_1137 hypothetical protein YP_004228800.1 PFAM: fatty acid hydroxylase; KEGG: bgf:BC1003_1136 fatty acid hydroxylase YP_004228801.1 KEGG: bgf:BC1003_1135 40-residue YVTN family beta-propeller repeat-containing protein YP_004228802.1 PFAM: YadA domain-containing protein; Hep_Hag repeat-containing protein; Haemagluttinin domain protein; KEGG: bgf:BC1003_1134 YadA domain-containing protein YP_004228803.1 TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; DEAD/DEAH box helicase domain protein; protein of unknown function DUF1605; KEGG: bgf:BC1003_1133 ATP-dependent helicase HrpA; SMART: helicase-associated domain protein; DEAD-like helicase ; helicase domain protein; ATPase AAA YP_004228804.1 TIGRFAM: amino-acid N-acetyltransferase; KEGG: bgf:BC1003_1132 amino-acid N-acetyltransferase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase YP_004228805.1 PFAM: Fe(II) trafficking protein YggX; KEGG: bgf:BC1003_1131 Fe(II) trafficking protein YggX YP_004228806.1 KEGG: bpy:Bphyt_2625 general substrate transporter YP_004228807.1 TIGRFAM: phosphodiesterase, MJ0936 family; KEGG: bgf:BC1003_1129 phosphodiesterase, MJ0936 family YP_004228808.1 KEGG: bpy:Bphyt_2627 hypothetical protein YP_004228809.1 PFAM: protein of unknown function DUF1211; KEGG: bgf:BC1003_1128 hypothetical protein YP_004228810.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bgf:BC1003_1127 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004228811.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; GGDEF domain containing protein; GAF domain protein; KEGG: bgf:BC1003_1126 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; GAF domain protein YP_004228812.1 KEGG: bgf:BC1003_1125 hypothetical protein YP_004228813.1 KEGG: bgf:BC1003_1124 hypothetical protein YP_004228814.1 KEGG: bgf:BC1003_1123 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004228815.1 KEGG: bgf:BC1003_1122 oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_004228816.1 PFAM: protein of unknown function DUF45; KEGG: bgf:BC1003_1121 hypothetical protein YP_004228817.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bgf:BC1003_1120 mandelate racemase/muconate lactonizing protein YP_004228818.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bgf:BC1003_1119 periplasmic-binding protein/LacI transcriptional regulator YP_004228819.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_1118 inner-membrane translocator YP_004228820.1 KEGG: bgf:BC1003_1117 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228821.1 KEGG: bgf:BC1003_1113 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004228822.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_1112 extracellular solute-binding protein family 1 YP_004228823.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_1111 binding-protein-dependent transport systems inner membrane component YP_004228824.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_1110 binding-protein-dependent transport systems inner membrane component YP_004228825.1 KEGG: bgf:BC1003_1109 ABC transporter; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: ATPase AAA YP_004228826.1 PFAM: metallophosphoesterase; KEGG: bgf:BC1003_1108 metallophosphoesterase YP_004228827.1 PFAM: Protein of unknown function DUF2569; KEGG: bgf:BC1003_1107 hypothetical protein YP_004228828.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1106 major facilitator superfamily protein YP_004228829.1 KEGG: bgf:BC1003_1105 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004228830.1 KEGG: bgf:BC1003_1104 LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004228831.1 PFAM: Ferritin Dps family protein; KEGG: bgf:BC1003_1103 ferritin Dps family protein YP_004228832.1 PFAM: protein of unknown function DUF1328; KEGG: bgf:BC1003_1102 hypothetical protein YP_004228833.1 PFAM: protein of unknown function DUF1328; KEGG: bgf:BC1003_1101 hypothetical protein YP_004228834.1 KEGG: bgf:BC1003_1100 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein YP_004228835.1 PFAM: Entericidin EcnAB; KEGG: bgf:BC1003_1099 entericidin EcnAB YP_004228836.1 KEGG: bgf:BC1003_1098 lipoprotein YP_004228837.1 KEGG: bgf:BC1003_1097 NADH:flavin oxidoreductase/NADH oxidase; manually curated; PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004228838.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_1096 hypothetical protein YP_004228839.1 TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: bgf:BC1003_1095 pentapeptide MXKDX repeat-containing protein YP_004228840.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bgf:BC1003_1094 oxidoreductase molybdopterin-binding protein YP_004228841.1 PFAM: cytochrome b/b6 domain; KEGG: bgf:BC1003_1093 transmembrane hydrogenase cytochrome b-type subunit YP_004228842.1 PFAM: protein of unknown function DUF1223; KEGG: bgf:BC1003_1092 hypothetical protein YP_004228843.1 PFAM: transcription elongation factor GreA/GreB domain-containing protein; KEGG: bgf:BC1003_1091 GreA/GreB family elongation factor YP_004228844.1 KEGG: bgf:BC1003_1090 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_004228845.1 KEGG: bgf:BC1003_1089 hypothetical protein YP_004228846.1 KEGG: bgf:BC1003_1088 hypothetical protein YP_004228847.1 KEGG: bgf:BC1003_1087 L-lactate transport; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_004228848.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_1086 hypothetical protein YP_004228849.1 KEGG: bgf:BC1003_1085 hypothetical protein YP_004228850.1 KEGG: bgf:BC1003_1084 exported lipoprotein YP_004228851.1 PFAM: Protein of unknown function DUF2844; KEGG: bgf:BC1003_1083 hypothetical protein YP_004228852.1 PFAM: Protein of unknown function DUF3443; KEGG: bgf:BC1003_1082 hypothetical protein YP_004228853.1 KEGG: bgf:BC1003_1081 accessory processing protein YP_004228854.1 KEGG: bgf:BC1003_1080 hypothetical protein YP_004228855.1 KEGG: bgf:BC1003_1079 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_004228856.1 KEGG: bgf:BC1003_1078 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228857.1 KEGG: bgf:BC1003_1077 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004228858.1 KEGG: bgf:BC1003_1076 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004228859.1 KEGG: bgf:BC1003_1075 dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase YP_004228860.1 KEGG: bgf:BC1003_1074 NCS1 nucleoside transporter family; TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin YP_004228861.1 TIGRFAM: dihydroorotate dehydrogenase family protein; KEGG: bgf:BC1003_1073 dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase YP_004228862.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bgf:BC1003_1072 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004228863.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bgf:BC1003_1071 amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20 YP_004228864.1 PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein; regulatory protein TetR; KEGG: bgf:BC1003_1070 tetracycline transcriptional regulator YcdC domain-containing protein YP_004228865.1 KEGG: bgf:BC1003_1069 benzoyl-CoA oxygenase/reductase, BoxA protein; TIGRFAM: benzoyl-CoA oxygenase/reductase, BoxA protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein YP_004228866.1 KEGG: bgf:BC1003_1068 benzoyl-CoA oxygenase subunit B; TIGRFAM: benzoyl-CoA oxygenase, B subunit; PFAM: phenylacetic acid catabolic family protein YP_004228867.1 KEGG: bgf:BC1003_1067 benzoyl-CoA-dihydrodiol lyase; TIGRFAM: benzoyl-CoA-dihydrodiol lyase; PFAM: Enoyl-CoA hydratase/isomerase YP_004228868.1 KEGG: bgf:BC1003_1066 XRE family transcriptional regulator; PFAM: shikimate kinase; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004228869.1 KEGG: bpy:Bphyt_2698 hypothetical protein YP_004228870.1 PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_A1420 aldehyde dehydrogenase YP_004228871.1 KEGG: bgf:BC1003_1063 benzoate-CoA ligase family; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase YP_004228872.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_1062 alpha/beta hydrolase fold protein YP_004228873.1 KEGG: bgf:BC1003_1061 hypothetical protein YP_004228874.1 TIGRFAM: phospholipase C, phosphocholine-specific; KEGG: bgf:BC1003_1060 phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_004228875.1 KEGG: bgf:BC1003_1059 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004228876.1 KEGG: bgf:BC1003_1058 hypothetical protein YP_004228877.1 KEGG: bgf:BC1003_1057 hypothetical protein YP_004228878.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1056 LysR family transcriptional regulator YP_004228879.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: bxe:Bxe_A1391 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase YP_004228880.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_1054 acyl-CoA dehydrogenase domain-containing protein YP_004228881.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_1053 acyl-CoA dehydrogenase domain-containing protein YP_004228882.1 KEGG: bgf:BC1003_2375 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_004228883.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: bgf:BC1003_2376 integration host factor subunit alpha; SMART: histone family protein DNA-binding protein YP_004228884.1 TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: bgf:BC1003_2377 phenylalanyl-tRNA synthetase subunit beta YP_004228885.1 KEGG: bgf:BC1003_2378 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_004228886.1 KEGG: bgf:BC1003_2379 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_004228887.1 KEGG: bgf:BC1003_2380 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35 YP_004228888.1 KEGG: bgf:BC1003_2381 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_004228889.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; KEGG: bpy:Bphyt_2756 threonyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase SAD YP_004228890.1 TIGRFAM: RelA/SpoT family protein; KEGG: bgf:BC1003_2383 (p)ppGpp synthetase I SpoT/RelA; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; amino acid-binding ACT domain protein YP_004228891.1 PFAM: Endoribonuclease L-PSP; KEGG: bpy:Bphyt_2758 endoribonuclease L-PSP YP_004228892.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_2385 alpha/beta hydrolase fold protein YP_004228893.1 SMART: coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: bgf:BC1003_2386 3-oxoacid CoA-transferase subunit B; PFAM: coenzyme A transferase YP_004228894.1 SMART: coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: bgf:BC1003_2387 3-oxoacid CoA-transferase subunit A; PFAM: coenzyme A transferase YP_004228895.1 KEGG: bgf:BC1003_2388 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; PAS domain containing protein YP_004228896.1 PFAM: thioesterase superfamily protein; KEGG: bgf:BC1003_2389 thioesterase superfamily protein YP_004228897.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_2390 short-chain dehydrogenase/reductase SDR YP_004228898.1 KEGG: bgf:BC1003_2391 electron-transferring-flavoprotein dehydrogenase; PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004228899.1 PFAM: glycosyl transferase family 9; KEGG: bgf:BC1003_2392 glycosyl transferase family 9 YP_004228900.1 TIGRFAM: chorismate synthase; KEGG: bgf:BC1003_2393 chorismate synthase; PFAM: chorismate synthase YP_004228901.1 KEGG: bgf:BC1003_2394 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase YP_004228902.1 KEGG: bgf:BC1003_2395 CBS domain containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004228903.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bgf:BC1003_2396 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004228904.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_2771 alpha/beta hydrolase fold YP_004228905.1 KEGG: bgf:BC1003_2398 hypothetical protein YP_004228906.1 KEGG: bgf:BC1003_2399 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_004228907.1 KEGG: bxe:Bxe_A1353 Trp repressor binding protein; TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase YP_004228908.1 PFAM: Protein of unknown function DUF2069, membrane; KEGG: bpy:Bphyt_2775 hypothetical protein YP_004228909.1 PFAM: FAD linked oxidase domain protein; KEGG: bgf:BC1003_2402 FAD linked oxidase domain-containing protein YP_004228910.1 PFAM: metallophosphoesterase; KEGG: bgf:BC1003_2403 metallophosphoesterase YP_004228911.1 KEGG: bgf:BC1003_2404 hypothetical protein YP_004228912.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_2405 LysR family transcriptional regulator YP_004228913.1 KEGG: bgf:BC1003_2406 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004228914.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bgf:BC1003_2407 fusaric acid resistance protein conserved region YP_004228915.1 PFAM: protein of unknown function DUF1656; KEGG: bpy:Bphyt_2783 protein of unknown function DUF1656 YP_004228916.1 PFAM: secretion protein HlyD family protein; KEGG: bgf:BC1003_2409 secretion protein HlyD family protein YP_004228917.1 KEGG: bgf:BC1003_2410 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_004228918.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_2411 major facilitator superfamily protein YP_004228919.1 KEGG: bgf:BC1003_2412 propionate/CoA ligase; TIGRFAM: propionate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004228920.1 TIGRFAM: MTA/SAH nucleosidase; KEGG: bgf:BC1003_2413 MTA/SAH nucleosidase; PFAM: purine or other phosphorylase family 1 YP_004228921.1 PFAM: UvrD/REP helicase; KEGG: bgf:BC1003_2414 UvrD/REP helicase YP_004228922.1 KEGG: bgf:BC1003_2415 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_004228923.1 KEGG: bgf:BC1003_2416 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_004228924.1 PFAM: SirA-like domain-containing protein; KEGG: bxe:Bxe_A1333 hypothetical protein YP_004228925.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bpy:Bphyt_2803 oxidoreductase domain protein YP_004228926.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bgf:BC1003_2419 oxidoreductase domain-containing protein YP_004228927.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bpy:Bphyt_2805 transcriptional regulator, RpiR family YP_004228928.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bgf:BC1003_2421 ABC sugar transporter periplasmic ligand-binding protein YP_004228929.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_2422 inner-membrane translocator YP_004228930.1 KEGG: bpy:Bphyt_2808 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228931.1 PFAM: Protein of unknown function DUF2090; PfkB domain protein; KEGG: bgf:BC1003_2424 hypothetical protein YP_004228932.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: bgf:BC1003_2425 thiamine pyrophosphate central domain-containing protein YP_004228933.1 KEGG: bgf:BC1003_2426 myo-inosose-2 dehydratase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004228934.1 PFAM: KduI/IolB isomerase; KEGG: bgf:BC1003_2427 myo-inositol catabolism IolB domain-containing protein YP_004228935.1 PFAM: protein of unknown function DUF811; KEGG: bgf:BC1003_2428 hypothetical protein YP_004228936.1 KEGG: bgf:BC1003_2429 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228937.1 KEGG: bgf:BC1003_2430 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228938.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_2431 inner-membrane translocator YP_004228939.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_2432 inner-membrane translocator YP_004228940.1 PFAM: thioesterase superfamily protein; KEGG: bgf:BC1003_2433 thioesterase superfamily protein YP_004228941.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_2434 NUDIX hydrolase YP_004228942.1 KEGG: bxe:Bxe_A1314 L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004228943.1 KEGG: bgf:BC1003_2436 hypothetical protein YP_004228944.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_2437 LysR family transcriptional regulator YP_004228945.1 TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD; KEGG: bgf:BC1003_2438 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase SAD YP_004228946.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bgf:BC1003_2439 L-carnitine dehydratase/bile acid-inducible protein F YP_004228947.1 PFAM: protein of unknown function DUF1234; KEGG: bgf:BC1003_2440 hypothetical protein YP_004228948.1 TIGRFAM: gamma-glutamyltransferase; KEGG: bgf:BC1003_2441 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004228949.1 KEGG: bgf:BC1003_2442 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain YP_004228950.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_2443 NUDIX hydrolase YP_004228951.1 KEGG: bgf:BC1003_2444 hypothetical protein YP_004228952.1 KEGG: bgf:BC1003_2445 hypothetical protein YP_004228953.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bgf:BC1003_2446 di-heme cytochrome c peroxidase YP_004228954.1 KEGG: bgf:BC1003_2447 acid phosphatase; TIGRFAM: acid phosphatase; PFAM: phosphoesterase YP_004228955.1 PFAM: Bacitracin resistance protein BacA; KEGG: bgf:BC1003_2448 bacitracin resistance protein BacA YP_004228956.1 PFAM: Aldose 1-epimerase; KEGG: bgf:BC1003_2449 aldose 1-epimerase YP_004228957.1 KEGG: bgf:BC1003_2450 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004228958.1 KEGG: bpy:Bphyt_2840 conserved hypothetical lipoprotein YP_004228959.1 PFAM: Protein of unknown function DUF2288; KEGG: bgf:BC1003_2453 hypothetical protein YP_004228960.1 KEGG: bgf:BC1003_2454 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004228961.1 KEGG: bgf:BC1003_2455 hypothetical protein YP_004228962.1 KEGG: bgf:BC1003_2456 hypothetical protein YP_004228963.1 KEGG: bgf:BC1003_2457 hypothetical protein YP_004228964.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: bgf:BC1003_2458 phosphohistidine phosphatase, SixA; SMART: Phosphoglycerate mutase YP_004228965.1 KEGG: bgf:BC1003_2459 hypothetical protein YP_004228966.1 KEGG: bgf:BC1003_2460 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase YP_004228967.1 TIGRFAM: Polyphosphate kinase; KEGG: bgf:BC1003_2461 polyphosphate kinase; PFAM: Polyphosphate kinase YP_004228968.1 TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; Protein of unknown function DUF3329; histidine kinase A domain protein; KEGG: bgf:BC1003_2462 histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004228969.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: bgf:BC1003_2463 winged helix family two component transcriptional regulator; SMART: response regulator receiver YP_004228970.1 KEGG: bgf:BC1003_2464 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_004228971.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bgf:BC1003_2465 phosphate ABC transporter ATPase subunit; SMART: ATPase AAA YP_004228972.1 KEGG: bgf:BC1003_2466 phosphate ABC transporter inner membrane subunit PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_004228973.1 KEGG: bgf:BC1003_2467 phosphate ABC transporter inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_004228974.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; KEGG: bgf:BC1003_2468 phosphate ABC transporter periplasmic phosphate-binding protein YP_004228975.1 KEGG: bgf:BC1003_2469 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase YP_004228976.1 PFAM: dihydropteroate synthase DHPS; manually curated; KEGG: bgf:BC1003_2470 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase YP_004228977.1 SMART: ATPase AAA; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: bgf:BC1003_2471 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA central domain protein YP_004228978.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: bgf:BC1003_2472 ribosomal RNA methyltransferase RrmJ/FtsJ YP_004228979.1 PFAM: protein of unknown function UPF0044; KEGG: bgf:BC1003_2473 hypothetical protein YP_004228980.1 KEGG: bgf:BC1003_2474 hypothetical protein YP_004228981.1 KEGG: bgf:BC1003_2475 GreA/GreB family elongation factor; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_004228982.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: bgf:BC1003_2476 carbamoyl-phosphate synthase large subunit; SMART: MGS domain protein YP_004228983.1 KEGG: bgf:BC1003_2477 carbamoyl-phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_004228984.1 KEGG: bgf:BC1003_2478 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; MLTD_N domain protein; SMART: Peptidoglycan-binding LysM YP_004228985.1 TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: bgf:BC1003_2479 hydroxyacylglutathione hydrolase; SMART: beta-lactamase domain protein YP_004228986.1 PFAM: methyltransferase type 11; KEGG: bxe:Bxe_A1252 hypothetical protein YP_004228987.1 KEGG: bgf:BC1003_2481 ribonuclease H; PFAM: ribonuclease H YP_004228988.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bgf:BC1003_2482 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III YP_004228989.1 KEGG: bgf:BC1003_2483 ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: ATPase AAA YP_004228990.1 PFAM: Protein of unknown function DUF2214, membrane; KEGG: bgf:BC1003_2484 hypothetical protein YP_004228991.1 KEGG: bgf:BC1003_2485 hypothetical protein YP_004228992.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_2486 glycosyl transferase group 1 YP_004228993.1 KEGG: bgf:BC1003_2487 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004228994.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: bgf:BC1003_2488 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_004228995.1 TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; KEGG: bgf:BC1003_2489 trehalose-phosphatase; PFAM: trehalose-phosphatase YP_004228996.1 PFAM: electron transport protein SCO1/SenC; KEGG: bgf:BC1003_2490 electron transport protein SCO1/SenC YP_004228997.1 PFAM: protein of unknown function DUF461; KEGG: bgf:BC1003_2491 hypothetical protein YP_004228998.1 PFAM: cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: bgf:BC1003_2492 cytochrome c oxidase caa3-type, assembly factor CtaG-related protein YP_004228999.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_2493 GCN5-related N-acetyltransferase YP_004229000.1 PFAM: GumN family protein; KEGG: bgf:BC1003_2494 GumN family protein YP_004229001.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: bgf:BC1003_2495 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004229002.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; UvrB/UvrC protein; Excinuclease ABC C subunit domain protein; KEGG: bgf:BC1003_2496 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_004229003.1 KEGG: bgf:BC1003_2498 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP015557; PFAM: Uncharacterised conserved protein UCP015557 YP_004229004.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein; KEGG: bgf:BC1003_2499 translation elongation factor P; SMART: Elongation factor P YP_004229005.1 PFAM: CsbD family protein; KEGG: bgf:BC1003_2500 CsbD family protein YP_004229006.1 KEGG: bgf:BC1003_2501 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_004229007.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: bgf:BC1003_2502 glycoside hydrolase family 3 domain-containing protein YP_004229008.1 KEGG: bgf:BC1003_2503 holo-ACP synthase; TIGRFAM: holo-ACP synthase; PFAM: 4'-phosphopantetheinyl transferase YP_004229009.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: bgf:BC1003_2504 pyridoxal phosphate biosynthetic protein PdxJ; PFAM: pyridoxal phosphate biosynthetic protein PdxJ YP_004229010.1 KEGG: bgf:BC1003_2505 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_004229011.1 KEGG: bgf:BC1003_2506 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_004229012.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: bxe:Bxe_A1085 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_004229013.1 KEGG: bgf:BC1003_2508 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region YP_004229014.1 TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; KEGG: bgf:BC1003_2509 GTP-binding protein LepA; SMART: elongation factor G domain-containing protein YP_004229015.1 PFAM: glutaredoxin 2; KEGG: bpy:Bphyt_2902 glutaredoxin 2 YP_004229016.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bgf:BC1003_2511 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004229017.1 PFAM: MucB/RseB family protein; KEGG: bgf:BC1003_2512 sigma E regulatory protein, MucB/RseB YP_004229018.1 PFAM: Anti sigma-E protein RseA family protein; KEGG: bgf:BC1003_2513 anti sigma-E protein RseA family protein YP_004229019.1 KEGG: bge:BC1002_2137 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004229020.1 KEGG: bgf:BC1003_2515 hypothetical protein YP_004229021.1 KEGG: bgf:BC1003_2516 3-oxoacyl-ACP synthase 2; TIGRFAM: 3-oxoacyl-[ACP] synthase 2; PFAM: beta-ketoacyl synthase YP_004229022.1 KEGG: bgf:BC1003_2517 ACP; TIGRFAM: ACP; PFAM: phosphopantetheine-binding YP_004229023.1 KEGG: bgf:BC1003_2518 3-oxoacyl-ACP reductase; TIGRFAM: 3-oxoacyl-ACP reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004229024.1 KEGG: bgf:BC1003_2519 malonyl CoA-ACP transacylase; TIGRFAM: malonyl CoA-ACP transacylase; PFAM: acyl transferase YP_004229025.1 TIGRFAM: 3-oxoacyl-ACP synthase III; KEGG: bgf:BC1003_2520 3-oxoacyl-ACP synthase III; PFAM: 3-Oxoacyl-[ACP (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[ACP (ACP)] synthase III YP_004229026.1 KEGG: bgf:BC1003_2521 fatty acid/phospholipid synthesis protein PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_004229027.1 KEGG: bgf:BC1003_2522 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_004229028.1 PFAM: protein of unknown function DUF177; KEGG: bgf:BC1003_2523 hypothetical protein YP_004229029.1 KEGG: bgf:BC1003_2524 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004229030.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bgf:BC1003_2525 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_004229031.1 PFAM: peptidase S49; KEGG: bgf:BC1003_2526 peptidase S49 YP_004229032.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bgf:BC1003_2527 Rieske (2Fe-2S) iron-sulfur domain-containing protein YP_004229033.1 KEGG: bgf:BC1003_2528 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004229034.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bgf:BC1003_2529 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein YP_004229035.1 KEGG: bge:BC1002_2153 hypothetical protein YP_004229036.1 KEGG: bgf:BC1003_2530 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_004229037.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: bgf:BC1003_2531 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_004229038.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: bgf:BC1003_2532 molybdopterin-guanine dinucleotide biosynthesis protein A YP_004229039.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: bgf:BC1003_2533 molybdenum cofactor synthesis domain-containing protein; SMART: molybdopterin binding domain YP_004229040.1 KEGG: bgf:BC1003_2534 hypothetical protein YP_004229041.1 PFAM: protein of unknown function DUF195; KEGG: bxe:Bxe_A1056 hypothetical protein YP_004229042.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bgf:BC1003_2536 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004229043.1 PFAM: citrate transporter; KEGG: bgf:BC1003_2537 arsenite-anitmonite efflux pump, ArsB family YP_004229044.1 PFAM: protein of unknown function DUF162; KEGG: bgf:BC1003_2538 hypothetical protein YP_004229045.1 TIGRFAM: nicotinate phosphoribosyltransferase; KEGG: bgf:BC1003_2539 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_004229046.1 KEGG: bgf:BC1003_2540 ferredoxin YP_004229047.1 PFAM: CreA family protein; KEGG: bgf:BC1003_2541 CreA family protein YP_004229048.1 KEGG: bgf:BC1003_2542 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004229049.1 PFAM: AzlC family protein; KEGG: bgf:BC1003_2543 AzlC family protein YP_004229050.1 PFAM: branched-chain amino acid transport; KEGG: bgf:BC1003_2544 branched-chain amino acid transport YP_004229051.1 KEGG: bgf:BC1003_2545 hypothetical protein YP_004229052.1 PFAM: UvrD/REP helicase; KEGG: bgf:BC1003_2546 UvrD/REP helicase YP_004229053.1 KEGG: bgf:BC1003_2547 hypothetical protein YP_004229054.1 KEGG: bgf:BC1003_2548 signal peptide protein YP_004229055.1 KEGG: bgf:BC1003_2549 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004229056.1 KEGG: bgf:BC1003_2550 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004229057.1 PFAM: Bile acid:sodium symporter; KEGG: bgf:BC1003_2551 bile acid:sodium symporter YP_004229058.1 KEGG: bgf:BC1003_2552 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004229059.1 KEGG: bgf:BC1003_2553 fumarate hydratase, class II; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_004229060.1 PFAM: thioesterase superfamily protein; KEGG: bgf:BC1003_2554 thioesterase superfamily protein YP_004229061.1 KEGG: bgf:BC1003_2555 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004229062.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_2556 major facilitator superfamily protein YP_004229063.1 KEGG: bgf:BC1003_2557 hypothetical protein YP_004229064.1 KEGG: bgf:BC1003_2558 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004229065.1 PFAM: FecR protein; KEGG: bgf:BC1003_2559 prolin-rich transmembrane protein YP_004229066.1 TIGRFAM: thymidylate synthase; KEGG: bgf:BC1003_2560 thymidylate synthase; PFAM: thymidylate synthase YP_004229067.1 KEGG: bgf:BC1003_2561 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_004229068.1 KEGG: ani:AN6522.2 hypothetical protein YP_004229069.1 KEGG: bgf:BC1003_2562 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_004229070.1 PFAM: peptidase U62; KEGG: bgf:BC1003_2563 peptidase U62 YP_004229071.1 PFAM: protein of unknown function DUF615; KEGG: bgf:BC1003_2564 hypothetical protein YP_004229072.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: bxe:Bxe_A1017 molybdenum cofactor biosynthesis protein MogA; SMART: molybdopterin binding domain YP_004229073.1 KEGG: bgf:BC1003_2566 exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_004229074.1 KEGG: bgf:BC1003_2567 STE24 endopeptidase; PFAM: peptidase M48 YP_004229075.1 KEGG: bgf:BC1003_2568 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_004229076.1 KEGG: bgf:BC1003_2569 hypothetical protein YP_004229077.1 PFAM: cobalamin biosynthesis protein CbiB; KEGG: bgf:BC1003_2570 cobalamin biosynthesis protein CbiB YP_004229078.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_2571 NUDIX hydrolase YP_004229079.1 KEGG: bgf:BC1003_2572 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_004229080.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: bgf:BC1003_2573 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_004229081.1 KEGG: bgf:BC1003_2574 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_004229082.1 KEGG: bgf:BC1003_2575 hypothetical protein YP_004229083.1 KEGG: bgf:BC1003_2576 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_004229084.1 KEGG: bgf:BC1003_2577 membrane-bound dehydrogenase YP_004229085.1 KEGG: bgf:BC1003_2578 hypothetical protein YP_004229086.1 KEGG: bgf:BC1003_2579 radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004229087.1 KEGG: bgf:BC1003_2580 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004229088.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_2581 FAD dependent oxidoreductase YP_004229089.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase, N-terminal, bacteria; KEGG: bpy:Bphyt_2983 acyl-CoA dehydrogenase domain protein YP_004229090.1 KEGG: bgf:BC1003_2583 electron transfer flavoprotein subunit alpha; PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit YP_004229091.1 KEGG: bge:BC1002_2215 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit YP_004229092.1 KEGG: bpy:Bphyt_2986 lipoprotein, YaeC family; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004229093.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_2586 binding-protein-dependent transport systems inner membrane component YP_004229094.1 KEGG: bgf:BC1003_2587 ABC transporter; PFAM: NIL domain; ABC transporter related; SMART: ATPase AAA YP_004229095.1 KEGG: bgf:BC1003_2588 acylglycerol lipase YP_004229096.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_2589 enoyl-CoA hydratase/isomerase YP_004229097.1 PFAM: histone deacetylase superfamily; KEGG: bgf:BC1003_2590 histone deacetylase superfamily YP_004229098.1 TIGRFAM: lytic murein transglycosylase B; KEGG: bxe:Bxe_A0991 murein transglycosylase YP_004229099.1 KEGG: bgf:BC1003_2592 cysteine synthase B; TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit YP_004229100.1 KEGG: bgf:BC1003_2593 helix-hairpin-helix motif protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1 YP_004229101.1 KEGG: bpy:Bphyt_2995 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004229102.1 KEGG: bgf:BC1003_2595 RfaE bifunctional protein; TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein YP_004229103.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bgf:BC1003_2596 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation YP_004229104.1 SMART: Tetratricopeptide repeat; KEGG: bgf:BC1003_2597 tetratricopeptide repeat-containing protein YP_004229105.1 KEGG: bgf:BC1003_2598 hypothetical protein YP_004229106.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: bgf:BC1003_2599 integration host factor subunit beta; SMART: histone family protein DNA-binding protein YP_004229107.1 KEGG: bgf:BC1003_2600 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein YP_004229108.1 TIGRFAM: cytidylate kinase; KEGG: bgf:BC1003_2601 cytidylate kinase; PFAM: cytidylate kinase region YP_004229109.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: bgf:BC1003_2602 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004229110.1 KEGG: bgf:BC1003_2603 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase YP_004229111.1 KEGG: bgf:BC1003_2604 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004229112.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase, type II; KEGG: bgf:BC1003_2605 chorismate mutase; SMART: Chorismate mutase YP_004229113.1 TIGRFAM: phosphoserine aminotransferase; KEGG: bgf:BC1003_2606 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_004229114.1 PFAM: Protein of unknown function DUF2059; KEGG: bgf:BC1003_2607 hypothetical protein YP_004229115.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: bgf:BC1003_2608 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004229116.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_2609 OmpA/MotB domain-containing protein YP_004229117.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: bgf:BC1003_2610 ubiquinone biosynthesis O-methyltransferase; PFAM: methyltransferase type 11 YP_004229118.1 KEGG: bgf:BC1003_2611 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004229119.1 KEGG: bgf:BC1003_2612 type I secretion outer membrane protein, TolC family; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_004229120.1 KEGG: bgf:BC1003_2613 ABC transporter; PFAM: peptidase C39; ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA YP_004229121.1 KEGG: bgf:BC1003_2614 hypothetical protein YP_004229122.1 KEGG: bgf:BC1003_2615 hypothetical protein YP_004229123.1 KEGG: bgf:BC1003_2616 lipoprotein YP_004229124.1 KEGG: bpy:Bphyt_3019 hypothetical protein YP_004229125.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_2618 transcriptional regulator of molybdate metabolism, LysR family YP_004229126.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bgf:BC1003_2619 NAD-dependent formate dehydrogenase subunit gamma YP_004229127.1 KEGG: bgf:BC1003_2620 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain YP_004229128.1 KEGG: bgf:BC1003_2621 formate dehydrogenase subunit alpha; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; molybdopterin oxidoreductase Fe4S4 region YP_004229129.1 PFAM: Formate dehydrogenase, delta subunit; KEGG: bgf:BC1003_2622 formate dehydrogenase subunit delta YP_004229130.1 PFAM: monooxygenase FAD-binding; KEGG: bgf:BC1003_2623 monooxygenase FAD-binding protein YP_004229131.1 KEGG: bgf:BC1003_2624 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004229132.1 KEGG: bgf:BC1003_2625 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004229133.1 KEGG: bgf:BC1003_2626 tetratricopeptide repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004229134.1 KEGG: bgf:BC1003_2627 major facilitator superfamily citrate/H(+) symporter YP_004229135.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_2628 GCN5-related N-acetyltransferase YP_004229136.1 KEGG: bgf:BC1003_2629 hypothetical protein YP_004229137.1 PFAM: Protein of unknown function DUF2968; KEGG: bgf:BC1003_2630 exported lipoprotein YP_004229138.1 PFAM: peptidase C26; KEGG: bgf:BC1003_2631 peptidase C26 YP_004229139.1 PFAM: sodium/hydrogen exchanger; KEGG: bgf:BC1003_2632 sodium/hydrogen exchanger YP_004229140.1 PFAM: Protein of unknown function DUF2848; KEGG: bgf:BC1003_2633 hypothetical protein YP_004229141.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_2634 major facilitator superfamily protein YP_004229142.1 KEGG: bgf:BC1003_2635 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH YP_004229143.1 PFAM: Amidase; KEGG: bgf:BC1003_2636 amidase YP_004229144.1 PFAM: Disulphide bond formation protein DsbB; KEGG: bgf:BC1003_2637 disulfide bond formation protein DsbB YP_004229145.1 KEGG: bgf:BC1003_2638 xanthine dehydrogenase small subunit; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; ferredoxin; CO dehydrogenase flavoprotein domain protein; [2Fe-2S]-binding domain-containing protein YP_004229146.1 TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; KEGG: bgf:BC1003_2639 xanthine dehydrogenase, molybdopterin-binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead YP_004229147.1 KEGG: bgf:BC1003_2640 xanthine dehydrogenase accessory protein XdhC; TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182 YP_004229148.1 TIGRFAM: adenosine deaminase; KEGG: bgf:BC1003_2641 adenosine deaminase; PFAM: adenosine/AMP deaminase YP_004229149.1 KEGG: bgf:BC1003_2642 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase YP_004229150.1 PFAM: monooxygenase FAD-binding; KEGG: bgf:BC1003_2643 monooxygenase FAD-binding protein YP_004229151.1 PFAM: methyltransferase type 11; KEGG: bgf:BC1003_2644 methyltransferase type 11 YP_004229152.1 KEGG: bgf:BC1003_2645 excinuclease, ATPase subunit YP_004229153.1 KEGG: bgf:BC1003_2646 signal peptide protein YP_004229154.1 PFAM: beta-ketoacyl synthase; KEGG: bgf:BC1003_2647 beta-ketoacyl synthase YP_004229155.1 PFAM: beta-ketoacyl synthase; KEGG: bgf:BC1003_2648 beta-ketoacyl synthase YP_004229156.1 KEGG: bgf:BC1003_2649 3-oxoacyl-ACP reductase; TIGRFAM: 3-oxoacyl-ACP reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004229157.1 PFAM: beta-hydroxyacyl-ACP dehydratase; KEGG: bgf:BC1003_2650 beta-hydroxyacyl-ACP dehydratase YP_004229158.1 PFAM: beta-ketoacyl synthase; KEGG: bgf:BC1003_2651 beta-ketoacyl synthase YP_004229159.1 KEGG: bgf:BC1003_2652 drug efflux pump, RND superfamily YP_004229160.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bgf:BC1003_2653 signal peptide protein YP_004229161.1 PFAM: thioesterase superfamily protein; KEGG: bgf:BC1003_2654 thioesterase superfamily protein YP_004229162.1 KEGG: bpy:Bphyt_3058 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_004229163.1 PFAM: glycosyl transferase family 2; lipid A biosynthesis acyltransferase; KEGG: bgf:BC1003_2656 glycosyl transferase family 2 YP_004229164.1 PFAM: AMP-dependent synthetase and ligase; beta-hydroxyacyl-ACP dehydratase; KEGG: bgf:BC1003_2657 AMP-dependent synthetase and ligase YP_004229165.1 manually curated; KEGG: bgf:BC1003_2658 hypothetical protein YP_004229166.1 PFAM: phosphopantetheine-binding; KEGG: bgf:BC1003_2659 phosphopantetheine-binding protein YP_004229167.1 PFAM: phosphopantetheine-binding; KEGG: bgf:BC1003_2660 acyl-carrier protein YP_004229168.1 KEGG: bgf:BC1003_2661 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004229169.1 KEGG: bgf:BC1003_2662 hypothetical protein YP_004229170.1 PFAM: protein of unknown function UPF0016; KEGG: bgf:BC1003_2663 hypothetical protein YP_004229171.1 KEGG: bgf:BC1003_2664 transmembrane lipoprotein YP_004229172.1 KEGG: bgf:BC1003_2665 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase YP_004229173.1 PFAM: plasmid maintenance system killer; KEGG: bpy:Bphyt_3069 plasmid maintenance system killer YP_004229174.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: bpy:Bphyt_3070 XRE family plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein YP_004229175.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: bgf:BC1003_2666 inositol phosphatase/fructose-16-bisphosphatase YP_004229176.1 KEGG: bgf:BC1003_2667 hypothetical protein YP_004229177.1 KEGG: bgf:BC1003_2668 hypothetical protein YP_004229178.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase, type II; KEGG: bgf:BC1003_2669 chorismate mutase; SMART: Chorismate mutase YP_004229179.1 SMART: Exonuclease; Excinuclease ABC C subunit domain protein; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bgf:BC1003_2670 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein YP_004229180.1 KEGG: bgf:BC1003_2671 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004229181.1 KEGG: bgf:BC1003_2672 hypothetical protein YP_004229182.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_2673 porin gram-negative type YP_004229183.1 manually curated; TIGRFAM: transcription elongation factor GreB; KEGG: bgf:BC1003_2674 GreA/GreB family elongation factor; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_004229184.1 KEGG: bgf:BC1003_2675 hypothetical protein YP_004229185.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: bgf:BC1003_2676 (p)ppGpp synthetase I SpoT/RelA; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; metal-dependent phosphohydrolase HD sub domain YP_004229186.1 KEGG: bgf:BC1003_2677 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_004229187.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: bgf:BC1003_2678 guanylate kinase; PFAM: guanylate kinase YP_004229188.1 PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: bgf:BC1003_2679 YicC-like domain-containing protein YP_004229189.1 TIGRFAM: ribonuclease PH; KEGG: bgf:BC1003_2680 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_004229190.1 KEGG: bgf:BC1003_2681 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_004229191.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: bgf:BC1003_2682 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004229192.1 KEGG: bgf:BC1003_2684 hypothetical protein YP_004229193.1 KEGG: bgf:BC1003_2685 drug resistance transporter Bcr/CflA subfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004229194.1 KEGG: bxe:Bxe_A0897 hypothetical protein YP_004229195.1 KEGG: bgf:BC1003_2687 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_004229196.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: bgf:BC1003_2688 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_004229197.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: bgf:BC1003_2689 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_004229198.1 KEGG: bgf:BC1003_2690 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_004229199.1 KEGG: bpy:Bphyt_3102 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_004229200.1 KEGG: bgf:BC1003_2692 NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_004229201.1 PFAM: aminotransferase class I and II; KEGG: bgf:BC1003_2693 class I/II aminotransferase YP_004229202.1 PFAM: Lytic transglycosylase catalytic; KEGG: bgf:BC1003_2694 lytic transglycosylase catalytic YP_004229203.1 KEGG: bgf:BC1003_2695 UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_004229204.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_2696 lysine exporter protein LysE/YggA YP_004229205.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bgf:BC1003_2697 pyridoxal-5'-phosphate-dependent protein subunit beta YP_004229206.1 KEGG: bgf:BC1003_2698 hypothetical protein YP_004229207.1 KEGG: bgf:BC1003_2699 hypothetical protein YP_004229208.1 PFAM: Domain of unknown function DUF2520; oxidoreductase/dehydrogenase, Rossmann-like domain; KEGG: bgf:BC1003_2700 hypothetical protein YP_004229209.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bgf:BC1003_2701 ethyl tert-butyl ether degradation EthD YP_004229210.1 PFAM: protein of unknown function YGGT; KEGG: bgf:BC1003_2702 hypothetical protein YP_004229211.1 KEGG: bgf:BC1003_2704 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_004229212.1 KEGG: bgf:BC1003_2705 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_004229213.1 KEGG: bgf:BC1003_2706 hypothetical protein YP_004229214.1 KEGG: bgf:BC1003_2707 hypothetical protein; manually curated; PFAM: protein of unknown function UPF0153 YP_004229215.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: bgf:BC1003_2708 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004229216.1 KEGG: gca:Galf_1527 ATP-dependent Lon protease YP_004229217.1 KEGG: sde:Sde_2753 hypothetical protein YP_004229218.1 PFAM: Heat shock protein 70; KEGG: car:cauri_2321 molecular chaperone DnaK YP_004229219.1 KEGG: cqu:CpipJ_CPIJ017450 mushroom body defect protein YP_004229220.1 SMART: Zinc finger, C2H2-like; KEGG: cro:ROD_34291 hypothetical protein YP_004229221.1 KEGG: sde:Sde_2756 hypothetical protein YP_004229222.1 KEGG: dak:DaAHT2_2165 hypothetical protein YP_004229223.1 PFAM: Domain of unknown function DUF1788; KEGG: shn:Shewana3_1817 hypothetical protein YP_004229224.1 KEGG: shn:Shewana3_1816 hypothetical protein YP_004229225.1 KEGG: gsu:GSU2175 TrfA-related protein YP_004229226.1 KEGG: pna:Pnap_4829 hypothetical protein YP_004229227.1 PFAM: restriction endonuclease; KEGG: bts:Btus_1743 restriction endonuclease YP_004229228.1 KEGG: psa:PST_0631 hypothetical protein YP_004229229.1 KEGG: rle:RL2130 hypothetical protein YP_004229230.1 KEGG: psa:PST_0656 hypothetical protein YP_004229231.1 KEGG: tin:Tint_1918 hypothetical protein YP_004229232.1 KEGG: pna:Pnap_4967 hypothetical protein YP_004229233.1 PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tin:Tint_1901 hypothetical protein YP_004229234.1 KEGG: pol:Bpro_1933 hypothetical protein YP_004229235.1 KEGG: pol:Bpro_1934 hypothetical protein; PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004229236.1 KEGG: pol:Bpro_1935 hypothetical protein YP_004229237.1 KEGG: pol:Bpro_1936 hypothetical protein YP_004229238.1 KEGG: rpf:Rpic12D_2698 hypothetical protein YP_004229239.1 KEGG: bge:BC1002_4055 hypothetical protein YP_004229240.1 KEGG: rcu:RCOM_0055940 hypothetical protein YP_004229241.1 KEGG: wch:wcw_0771 cardiolipin synthetase YP_004229242.1 KEGG: nhl:Nhal_2125 hypothetical protein YP_004229243.1 KEGG: rpf:Rpic12D_3517 hypothetical protein YP_004229244.1 KEGG: noc:Noc_2240 phage integrase YP_004229245.1 PFAM: amino acid permease-associated region; KEGG: bpy:Bphyt_3123 amino acid permease-associated region YP_004229246.1 PFAM: protein of unknown function DUF1234; KEGG: bpy:Bphyt_3124 hypothetical protein YP_004229247.1 PFAM: peptidase M55 KEGG: bgf:BC1003_2711 peptidase M55 YP_004229248.1 PFAM: peptidase S58; KEGG: bgf:BC1003_2712 peptidase S58 YP_004229249.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_2713 binding-protein-dependent transport systems inner membrane component YP_004229250.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_2714 binding-protein-dependent transport systems inner membrane component YP_004229251.1 PFAM: extracellular solute-binding protein family 5; KEGG: bgf:BC1003_2715 extracellular solute-binding protein family 5 YP_004229252.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bgf:BC1003_2716 ABC transporter; SMART: ATPase AAA YP_004229253.1 KEGG: bgf:BC1003_2717 beta-aspartyl-peptidase; PFAM: peptidase T2 asparaginase 2 YP_004229254.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bgf:BC1003_2718 RpiR family transcriptional regulator YP_004229255.1 KEGG: bgf:BC1003_2719 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004229256.1 KEGG: bgf:BC1003_2720 hypothetical protein YP_004229257.1 manually curated; KEGG: bgf:BC1003_2721 hypothetical protein YP_004229258.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; KEGG: bgf:BC1003_2722 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_004229259.1 PFAM: aminotransferase class-III; KEGG: bgf:BC1003_2723 acetylornithine and succinylornithine aminotransferase YP_004229260.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_2724 GCN5-related N-acetyltransferase YP_004229261.1 KEGG: bgf:BC1003_2725 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004229262.1 KEGG: bph:Bphy_0591 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA YP_004229263.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_2727 inner-membrane translocator YP_004229264.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_2728 inner-membrane translocator YP_004229265.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_2729 extracellular ligand-binding receptor YP_004229266.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: bgf:BC1003_2730 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_004229267.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bgf:BC1003_2731 FKBP-type peptidylprolyl isomerase YP_004229268.1 KEGG: bge:BC1002_2390 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_004229269.1 KEGG: bgf:BC1003_2733 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_004229270.1 KEGG: bge:BC1002_2392 ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_004229271.1 KEGG: bgf:BC1003_2735 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004229272.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: bgf:BC1003_2736 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_004229273.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: bpy:Bphyt_3153 quinolinate synthetase; PFAM: Quinolinate synthetase A YP_004229274.1 PFAM: fatty acid desaturase; KEGG: bgf:BC1003_2738 fatty acid desaturase YP_004229275.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bgf:BC1003_2739 mechanosensitive ion channel protein MscS YP_004229276.1 PFAM: Fmu (Sun) domain protein; KEGG: bgf:BC1003_2740 Fmu (Sun) domain-containing protein YP_004229277.1 KEGG: bgf:BC1003_2741 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_004229278.1 KEGG: bgf:BC1003_2742 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: FAD synthetase; Riboflavin kinase YP_004229279.1 KEGG: bgf:BC1003_2743 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_004229280.1 TIGRFAM: lipoprotein signal peptidase; KEGG: bgf:BC1003_2744 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_004229281.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: bgf:BC1003_2745 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_004229282.1 KEGG: bgf:BC1003_2746 luciferase family oxidoreductase, group 1; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_004229283.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: bxe:Bxe_A0803 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase YP_004229284.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; ATPase AAA central domain protein; Clp domain protein; Clp ATPase-like; KEGG: bgf:BC1003_2748 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: ATPase AAA YP_004229285.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: bgf:BC1003_2749 ATP-dependent Clp protease adaptor protein ClpS YP_004229286.1 KEGG: bgf:BC1003_2750 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004229287.1 PFAM: LysR substrate-binding; KEGG: rsl:RPSI07_mp0140 transcriptional regulators, LysR family YP_004229288.1 KEGG: bgf:BC1003_2751 hypothetical protein YP_004229289.1 KEGG: bgf:BC1003_2752 hypothetical protein YP_004229290.1 KEGG: bgf:BC1003_2753 hypothetical protein YP_004229291.1 KEGG: bgf:BC1003_2754 hypothetical protein YP_004229292.1 KEGG: bgf:BC1003_2755 PaaR motif-containing protein YP_004229293.1 KEGG: bvu:BVU_1074 glycosyl transferase family protein YP_004229294.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: bgf:BC1003_2756 isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004229295.1 PFAM: pseudouridine synthase; KEGG: bxe:Bxe_A0796 pseudouridine synthase, Rsu YP_004229296.1 PFAM: protein of unknown function DUF192; KEGG: bgf:BC1003_2758 hypothetical protein YP_004229297.1 KEGG: bgf:BC1003_2759 translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_004229298.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bgf:BC1003_2760 cupin YP_004229299.1 KEGG: bgf:BC1003_2761 high-affinity nickel-transporter; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter YP_004229300.1 PFAM: extracellular solute-binding protein family 5; KEGG: bgf:BC1003_2762 extracellular solute-binding protein family 5 YP_004229301.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_2763 binding-protein-dependent transport systems inner membrane component YP_004229302.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_2764 binding-protein-dependent transport systems inner membrane component YP_004229303.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bgf:BC1003_2765 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: ATPase AAA YP_004229304.1 KEGG: bgf:BC1003_2766 hypothetical protein YP_004229305.1 PFAM: aldo/keto reductase; KEGG: bgf:BC1003_2767 aldo/keto reductase YP_004229306.1 KEGG: bge:BC1002_2440 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH YP_004229307.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bgf:BC1003_2769 L-carnitine dehydratase/bile acid-inducible protein F YP_004229308.1 PFAM: citrate synthase; KEGG: bgf:BC1003_2770 citrate synthase YP_004229309.1 PFAM: Protein of unknown function DUF2917; KEGG: bgf:BC1003_2771 hypothetical protein YP_004229310.1 KEGG: bgf:BC1003_2772 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004229311.1 KEGG: bgf:BC1003_2773 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004229312.1 KEGG: bgf:BC1003_2774 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_004229313.1 KEGG: bgf:BC1003_2775 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004229314.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: bgf:BC1003_2776 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_004229315.1 KEGG: bgf:BC1003_2777 hypothetical protein YP_004229316.1 KEGG: bgf:BC1003_2778 hypothetical protein YP_004229317.1 KEGG: bgf:BC1003_2779 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like YP_004229318.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: bgf:BC1003_2780 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_004229319.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: bgf:BC1003_2782 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_004229320.1 PFAM: protein of unknown function DUF343; KEGG: bgf:BC1003_2783 hypothetical protein YP_004229321.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: bgf:BC1003_2784 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_004229322.1 KEGG: bgf:BC1003_2785 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein YP_004229323.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_2786 short-chain dehydrogenase/reductase SDR YP_004229324.1 KEGG: bgf:BC1003_2787 transglutaminase domain-containing protein YP_004229325.1 KEGG: bgf:BC1003_2788 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_004229326.1 KEGG: bgf:BC1003_2789 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_004229327.1 PFAM: Protein of unknown function DUF3579; KEGG: bgf:BC1003_2790 hypothetical protein YP_004229328.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: bgf:BC1003_2791 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_004229329.1 TIGRFAM: argininosuccinate synthase; KEGG: bgf:BC1003_2792 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_004229330.1 KEGG: bgf:BC1003_2793 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein YP_004229331.1 PFAM: protein of unknown function DUF520; KEGG: bge:BC1002_2465 protein of unknown function DUF520 YP_004229332.1 PFAM: protein of unknown function DUF205; KEGG: bgf:BC1003_2795 hypothetical protein YP_004229333.1 manually curated; TIGRFAM: ybaK/ebsC protein; KEGG: bgf:BC1003_2796 YbaK/EbsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_004229334.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_2797 AMP-dependent synthetase and ligase YP_004229335.1 KEGG: bgf:BC1003_2798 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004229336.1 KEGG: bgf:BC1003_2799 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_004229337.1 KEGG: bgf:BC1003_2800 iron-sulfur cluster-binding protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730 YP_004229338.1 PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: bgf:BC1003_2801 hypothetical protein YP_004229339.1 KEGG: bgf:BC1003_2802 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; Localisation of periplasmic protein complexes; SMART: cell wall hydrolase/autolysin YP_004229340.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_2803 hypothetical protein YP_004229341.1 KEGG: bmj:BMULJ_03127 PilT-like protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc YP_004229342.1 PFAM: SpoVT/AbrB domain-containing protein; KEGG: bvi:Bcep1808_0145 SpoVT/AbrB domain-containing protein YP_004229343.1 PFAM: Pirin domain protein; KEGG: bgf:BC1003_2804 pirin YP_004229344.1 KEGG: bgf:BC1003_2805 thioredoxin; TIGRFAM: thioredoxin; PFAM: thioredoxin YP_004229345.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bgf:BC1003_2806 UBA/ThiF-type NAD/FAD-binding protein YP_004229346.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: bgf:BC1003_2807 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like YP_004229347.1 KEGG: bgf:BC1003_2808 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004229348.1 PFAM: protein of unknown function DUF72; KEGG: bpy:Bphyt_3223 protein of unknown function DUF72 YP_004229349.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bgf:BC1003_2810 peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A YP_004229350.1 KEGG: bgf:BC1003_2811 flavin reductase domain-containing protein FMN-binding protein; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_004229351.1 KEGG: bgf:BC1003_2812 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; regulatory protein MarR; SMART: Transcription regulator AsnC-type YP_004229352.1 TIGRFAM: arylformamidase; KEGG: bgf:BC1003_2813 arylformamidase; PFAM: cyclase family protein YP_004229353.1 KEGG: bgf:BC1003_2814 kynureninase; TIGRFAM: kynureninase; PFAM: aminotransferase class V YP_004229354.1 KEGG: bgf:BC1003_2815 tryptophan 2,3-dioxygenase; TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase YP_004229355.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_2816 short-chain dehydrogenase/reductase SDR YP_004229356.1 KEGG: bgf:BC1003_2817 xylulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_004229357.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bgf:BC1003_2818 alcohol dehydrogenase GroES domain-containing protein YP_004229358.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_2819 inner-membrane translocator YP_004229359.1 KEGG: bgf:BC1003_2820 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004229360.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bgf:BC1003_2821 periplasmic-binding protein/LacI transcriptional regulator YP_004229361.1 KEGG: bgf:BC1003_2822 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004229362.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: bgf:BC1003_2823 mannitol dehydrogenase domain-containing protein YP_004229363.1 KEGG: bgf:BC1003_2824 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_004229364.1 PFAM: sugar-binding domain-containing protein; KEGG: bgf:BC1003_2825 DeoR family transcriptional regulator YP_004229365.1 KEGG: bgf:BC1003_2826 ABC transporter; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: ATPase AAA YP_004229366.1 KEGG: bgf:BC1003_2828 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004229367.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_2829 binding-protein-dependent transport systems inner membrane component YP_004229368.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_2830 binding-protein-dependent transport systems inner membrane component YP_004229369.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_2831 extracellular solute-binding protein family 1 YP_004229370.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_2832 short-chain dehydrogenase/reductase SDR YP_004229371.1 PFAM: periplasmic solute binding protein; KEGG: bgf:BC1003_2833 periplasmic solute-binding protein YP_004229372.1 KEGG: bgf:BC1003_2834 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004229373.1 PFAM: ABC transporter; KEGG: bgf:BC1003_2835 ABC transporter YP_004229374.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: bgf:BC1003_2836 S-formylglutathione hydrolase; PFAM: esterase YP_004229375.1 KEGG: bgf:BC1003_2837 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_004229376.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: bgf:BC1003_2838 carbohydrate kinase, FGGY-like protein YP_004229377.1 KEGG: bgf:BC1003_2840 xanthine permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004229378.1 KEGG: bgf:BC1003_2841 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004229379.1 KEGG: bgf:BC1003_2842 transporter hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004229380.1 KEGG: bgf:BC1003_2843 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004229381.1 PFAM: Tetracycline transcriptional repressor MAATS-type domain-containing protein; regulatory protein TetR; KEGG: bgf:BC1003_2844 TetR family transcriptional regulator YP_004229382.1 PFAM: isochorismatase hydrolase; KEGG: bgf:BC1003_2845 isochorismatase hydrolase YP_004229383.1 KEGG: bgf:BC1003_2846 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004229384.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bgf:BC1003_2847 carbon monoxide dehydrogenase subunit G YP_004229385.1 PFAM: protein of unknown function DUF427; KEGG: bgf:BC1003_2848 hypothetical protein YP_004229386.1 KEGG: bgf:BC1003_2849 hypothetical protein YP_004229387.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bgf:BC1003_2850 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004229388.1 KEGG: bgf:BC1003_2851 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004229389.1 KEGG: bpy:Bphyt_3267 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004229390.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: bgf:BC1003_2854 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 YP_004229391.1 PFAM: fatty acid hydroxylase; KEGG: bgf:BC1003_2855 fatty acid hydroxylase YP_004229392.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bgf:BC1003_2856 lipolytic protein G-D-S-L family YP_004229393.1 KEGG: bgf:BC1003_2857 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein YP_004229394.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: bgf:BC1003_2858 phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_004229395.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: bgf:BC1003_2859 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004229396.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: bgf:BC1003_2860 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_004229397.1 TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: bgf:BC1003_2861 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II YP_004229398.1 TIGRFAM: pyruvate kinase; KEGG: bgf:BC1003_2862 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_004229399.1 KEGG: bgf:BC1003_2863 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_004229400.1 PFAM: branched-chain amino acid transport; KEGG: bgf:BC1003_2864 branched-chain amino acid transport YP_004229401.1 PFAM: AzlC family protein; KEGG: bgf:BC1003_2865 AzlC family protein YP_004229402.1 KEGG: bgf:BC1003_2866 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_004229403.1 PFAM: Zinc finger, CHCC-type; KEGG: bgf:BC1003_2867 zinc finger, CHCC-type YP_004229404.1 KEGG: bgf:BC1003_2868 lipopolysaccharide heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9 YP_004229405.1 KEGG: bgf:BC1003_2869 hypothetical protein YP_004229406.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_2870 hydrolase of the alpha/beta-hydrolase fold protein YP_004229407.1 PFAM: Protein of unknown function DUF2944; KEGG: bgf:BC1003_2871 hypothetical protein YP_004229408.1 PFAM: peptidase M48; KEGG: bgf:BC1003_2872 peptidase M48 YP_004229409.1 KEGG: bxe:Bxe_A0679 molybdenum cofactor biosynthesis protein MoaC; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC YP_004229410.1 PFAM: Protein of unknown function DUF3366; O-antigen polymerase; KEGG: bgf:BC1003_2874 O-antigen polymerase YP_004229411.1 PFAM: Fimbrial protein pilin; KEGG: bgf:BC1003_2875 type IV fimbrial pilin protein YP_004229412.1 PFAM: Integral membrane protein TerC; KEGG: bgf:BC1003_2876 integral membrane protein TerC YP_004229413.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: bgf:BC1003_2877 succinyl-CoA synthetase subunit alpha; SMART: CoA-binding domain protein YP_004229414.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: bgf:BC1003_2878 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_004229415.1 PFAM: Protein of unknown function DUF2889; KEGG: bgf:BC1003_2879 hypothetical protein YP_004229416.1 PFAM: regulatory protein RecX; KEGG: bgf:BC1003_2880 regulatory protein RecX YP_004229417.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: bgf:BC1003_2881 RecA protein; SMART: ATPase AAA YP_004229418.1 KEGG: bgf:BC1003_2882 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004229419.1 KEGG: bgf:BC1003_2883 integral membrane sensor signal transduction histidine kinase; PFAM: Two-component sensor kinase domain-containing protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004229420.1 KEGG: bgf:BC1003_2884 major facilitator transporter YP_004229421.1 KEGG: bgf:BC1003_2885 hypothetical protein YP_004229422.1 KEGG: bgf:BC1003_2886 regulatory protein MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004229423.1 KEGG: bgf:BC1003_2887 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004229424.1 KEGG: bgf:BC1003_2888 regulatory protein GntR HTH; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH YP_004229425.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bgf:BC1003_2889 mandelate racemase/muconate lactonizing protein YP_004229426.1 KEGG: bgf:BC1003_2890 hypothetical protein YP_004229427.1 KEGG: bgf:BC1003_2892 copper resistance D domain-containing protein YP_004229428.1 PFAM: copper resistance protein CopC; KEGG: bgf:BC1003_2893 copper resistance protein CopC YP_004229429.1 PFAM: cytochrome c class I; KEGG: bgf:BC1003_2894 cytochrome c class I YP_004229430.1 KEGG: bgf:BC1003_2895 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004229431.1 KEGG: bgf:BC1003_2896 channel protein, hemolysin III family; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_004229432.1 KEGG: bgf:BC1003_2897 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004229433.1 KEGG: bgf:BC1003_2898 hypothetical protein YP_004229434.1 KEGG: bgf:BC1003_2899 hypothetical protein YP_004229435.1 KEGG: bxe:Bxe_A0644 gamma-glutamyltransferase 2; PFAM: gamma-glutamyltranspeptidase YP_004229436.1 KEGG: bgf:BC1003_2900 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004229437.1 KEGG: bgf:BC1003_2901 hypothetical protein YP_004229438.1 KEGG: bgf:BC1003_2902 hypothetical protein YP_004229439.1 KEGG: bgf:BC1003_2903 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase YP_004229440.1 KEGG: bxe:Bxe_A0638 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like YP_004229441.1 PFAM: major intrinsic protein; KEGG: bgf:BC1003_2905 major intrinsic protein YP_004229442.1 KEGG: bgf:BC1003_2906 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004229443.1 KEGG: bgf:BC1003_2907 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase YP_004229444.1 KEGG: bgf:BC1003_2908 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004229445.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_2909 major facilitator superfamily protein YP_004229446.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bgf:BC1003_2910 glyoxalase/bleomycin resistance protein/dioxygenase YP_004229447.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_2911 LysR family transcriptional regulator YP_004229448.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Radical SAM domain protein; protein of unknown function UPF0004 ; deoxyribonuclease/rho motif-related TRAM; KEGG: bgf:BC1003_2912 tRNA-i(6)A37 thiotransferase enzyme MiaB; SMART: Elongator protein 3/MiaB/NifB YP_004229449.1 PFAM: PhoH family protein; KEGG: bgf:BC1003_2913 PhoH family protein YP_004229450.1 PFAM: protein of unknown function UPF0054; KEGG: bgf:BC1003_2914 hypothetical protein YP_004229451.1 PFAM: ChaC family protein; KEGG: bpy:Bphyt_3332 ChaC family protein YP_004229452.1 KEGG: bxe:Bxe_A0626 CorC family Mg2+ / Co2+ transporter; PFAM: transporter-associated region; CBS domain containing protein; SMART: CBS domain containing protein YP_004229453.1 KEGG: bgf:BC1003_2917 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004229454.1 PFAM: peptidase M48; KEGG: bgf:BC1003_2918 peptidase M48 YP_004229455.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_2919 glutathione S-transferase YP_004229456.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: bgf:BC1003_2920 peptidase M24 YP_004229457.1 KEGG: bgf:BC1003_2921 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding YP_004229458.1 KEGG: bgf:BC1003_2922 hypothetical protein; TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase DuS YP_004229459.1 PFAM: helix-turn-helix Fis-type; KEGG: bpy:Bphyt_3340 DNA-binding protein fis YP_004229460.1 SMART: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: bxe:Bxe_A0619 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_004229461.1 KEGG: bgf:BC1003_2925 hypothetical protein YP_004229462.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: bgf:BC1003_2926 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_004229463.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; KEGG: bgf:BC1003_2927 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding class 1 YP_004229464.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase RuvB domain; KEGG: bpy:Bphyt_3346 Holliday junction DNA helicase RuvB; SMART: ATPase AAA YP_004229465.1 PFAM: Protein of unknown function DUF2236; KEGG: bxe:Bxe_A0614 hypothetical protein YP_004229466.1 KEGG: bgf:BC1003_2929 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase YP_004229467.1 KEGG: bgf:BC1003_2930 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_004229468.1 TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; KEGG: bgf:BC1003_2931 tyrosyl-tRNA synthetase; SMART: RNA-binding S4 domain protein YP_004229469.1 PFAM: protein of unknown function UPF0075; KEGG: bgf:BC1003_2932 hypothetical protein YP_004229470.1 KEGG: bpy:Bphyt_3352 iron-sulfur cluster insertion protein ErpA; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004229471.1 PFAM: ribosomal protein S9; KEGG: bgf:BC1003_2934 30S ribosomal protein S9 YP_004229472.1 KEGG: bgf:BC1003_2935 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_004229473.1 PFAM: OsmC family protein; KEGG: bxe:Bxe_A0605 OsmC-like protein YP_004229474.1 PFAM: Protein of unknown function DUF3025; KEGG: bpy:Bphyt_3356 hypothetical protein YP_004229475.1 TIGRFAM: dihydroorotase, homodimeric type; KEGG: bxe:Bxe_A0602 dihydroorotase; PFAM: amidohydrolase YP_004229476.1 PFAM: glutamine amidotransferase class-II; KEGG: bgf:BC1003_2939 glutamine amidotransferase class-II YP_004229477.1 KEGG: bgf:BC1003_2940 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004229478.1 KEGG: bgf:BC1003_2941 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004229479.1 KEGG: bgf:BC1003_2942 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004229480.1 KEGG: bgf:BC1003_2943 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004229481.1 KEGG: bgf:BC1003_2944 Glu/Leu/Phe/Val dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; SMART: Glu/Leu/Phe/Val dehydrogenase YP_004229482.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_2945 LysR family transcriptional regulator YP_004229483.1 KEGG: bgf:BC1003_2946 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain-containing protein YP_004229484.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: bgf:BC1003_2947 carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase YP_004229485.1 KEGG: bgf:BC1003_2948 gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_004229486.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: bgf:BC1003_2949 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_004229487.1 TIGRFAM: 6-phosphogluconate dehydratase; KEGG: bgf:BC1003_2950 6-phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004229488.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bgf:BC1003_2951 RpiR family transcriptional regulator YP_004229489.1 PFAM: methyltransferase type 11; KEGG: bgf:BC1003_2952 methyltransferase type 11 YP_004229490.1 KEGG: bgf:BC1003_2953 HMW1C glycosyltransferase involved in glycosylation of HMW1A and HMW2A YP_004229491.1 KEGG: bgf:BC1003_2954 hypothetical protein YP_004229492.1 KEGG: bgf:BC1003_2955 filamentous hemagglutinin family outer membrane protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein YP_004229493.1 PFAM: Uncharacterised protein family UPF0093; KEGG: bgf:BC1003_2956 hypothetical protein YP_004229494.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: bgf:BC1003_2957 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase YP_004229495.1 TIGRFAM: DNA polymerase III, delta subunit; KEGG: bgf:BC1003_2958 DNA polymerase III subunit delta; PFAM: DNA polymerase III delta YP_004229496.1 PFAM: Rare lipoprotein B; KEGG: bgf:BC1003_2959 rare lipoprotein B YP_004229497.1 KEGG: bgf:BC1003_2960 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_004229498.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bgf:BC1003_2961 biopolymer transport protein ExbD/TolR YP_004229499.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bgf:BC1003_2962 MotA/TolQ/ExbB proton channel YP_004229500.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: bgf:BC1003_2963 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_004229501.1 PFAM: SmpA/OmlA domain-containing protein; KEGG: bgf:BC1003_2965 SmpA/OmlA domain-containing protein YP_004229502.1 PFAM: ferric-uptake regulator; KEGG: bgf:BC1003_2966 ferric uptake regulator, Fur family YP_004229503.1 KEGG: bge:BC1002_2648 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase YP_004229504.1 TIGRFAM: allantoicase; KEGG: bxe:Bxe_A0569 allantoicase; PFAM: Allantoicase domain YP_004229505.1 PFAM: sodium:dicarboxylate symporter; KEGG: bpy:Bphyt_3388 C4-dicarboxylate transporter DctA YP_004229506.1 KEGG: bpy:Bphyt_3389 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH YP_004229507.1 SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bgf:BC1003_2967 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YP_004229508.1 TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: bgf:BC1003_2968 transketolase; SMART: Transketolase central region YP_004229509.1 PFAM: spermine synthase; KEGG: bgf:BC1003_2969 spermine synthase YP_004229510.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bgf:BC1003_2970 glyoxalase/bleomycin resistance protein/dioxygenase YP_004229511.1 PFAM: protein of unknown function DUF558; KEGG: bgf:BC1003_2971 hypothetical protein YP_004229512.1 PFAM: Barstar (barnase inhibitor); KEGG: bgf:BC1003_2972 barstar (barnase inhibitor) YP_004229513.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: bgf:BC1003_2973 guanine-specific ribonuclease N1 and T1 YP_004229514.1 PFAM: phosphate acetyl/butaryl transferase; malic protein NAD-binding; malic protein domain protein; KEGG: bgf:BC1003_2974 malic protein NAD-binding protein YP_004229515.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: bgf:BC1003_2975 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_004229516.1 PFAM: phosphatidylglycerophosphatase A; KEGG: bgf:BC1003_2976 phosphatidylglycerophosphatase A YP_004229517.1 PFAM: CinA domain protein; KEGG: bgf:BC1003_2977 CinA domain-containing protein YP_004229518.1 PFAM: protein of unknown function DUF985; KEGG: bpy:Bphyt_3403 protein of unknown function DUF985 YP_004229519.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: bgf:BC1003_2979 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_004229520.1 PFAM: Aldose 1-epimerase; KEGG: bgf:BC1003_2980 aldose 1-epimerase YP_004229521.1 PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; KEGG: bgf:BC1003_2981 SMP-30/gluconolaconase/LRE-like region-containing protein YP_004229522.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3408 short-chain dehydrogenase/reductase SDR YP_004229523.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_2983 inner-membrane translocator YP_004229524.1 KEGG: bgf:BC1003_2984 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004229525.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bgf:BC1003_2985 periplasmic-binding protein/LacI transcriptional regulator YP_004229526.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_2986 short-chain dehydrogenase/reductase SDR YP_004229527.1 PFAM: KDPG and KHG aldolase; KEGG: bxe:Bxe_A0544 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_004229528.1 KEGG: bgf:BC1003_2988 2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase YP_004229529.1 KEGG: bgf:BC1003_2989 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004229531.1 KEGG: bgf:BC1003_3004 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51 YP_004229532.1 KEGG: bgf:BC1003_3005 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_004229533.1 PFAM: ribonuclease II; KEGG: bgf:BC1003_3006 ribonuclease II YP_004229534.1 PFAM: protein of unknown function UPF0227; KEGG: bgf:BC1003_3007 hypothetical protein YP_004229535.1 KEGG: bgf:BC1003_3008 UDP-N-acetylmuramate; TIGRFAM: UDP-N-acetylmuramate; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004229536.1 KEGG: bgf:BC1003_3009 hypothetical protein YP_004229537.1 PFAM: Redoxin domain protein; KEGG: bpy:Bphyt_3424 redoxin domain protein YP_004229538.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: bgf:BC1003_3011 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_004229539.1 KEGG: bgf:BC1003_3012 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_004229540.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: bxe:Bxe_A0531 acetyl-CoA carboxylase biotin carboxylase subunit; SMART: biotin carboxylase domain protein YP_004229541.1 KEGG: bgf:BC1003_3014 50S ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase YP_004229542.1 KEGG: bgf:BC1003_3015 MJ0042 family finger-like protein; TIGRFAM: MJ0042 family finger-like protein; PFAM: Protein of unknown function DUF3426 YP_004229543.1 PFAM: Redoxin domain protein; KEGG: bxe:Bxe_A0528 thiol peroxidase (atypical 2-Cys peroxiredoxin) YP_004229544.1 PFAM: PfkB domain protein; KEGG: bgf:BC1003_3017 PfkB domain-containing protein YP_004229545.1 KEGG: bgf:BC1003_3018 outer membrane lipoprotein, SlyB-like protein YP_004229546.1 KEGG: bgf:BC1003_3019 histone H1-like protein YP_004229547.1 KEGG: bgf:BC1003_3020 hypothetical protein YP_004229548.1 KEGG: bgf:BC1003_3021 ribonucleoside-diphosphate reductase; PFAM: ribonucleotide reductase YP_004229549.1 KEGG: bgf:BC1003_3022 ribonucleoside-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein YP_004229550.1 KEGG: bgf:BC1003_3023 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_004229551.1 KEGG: bpy:Bphyt_3438 hypothetical protein YP_004229552.1 PFAM: cytochrome c assembly protein; KEGG: bgf:BC1003_3025 cytochrome c assembly protein YP_004229553.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: bgf:BC1003_3026 signal recognition particle protein; SMART: ATPase AAA YP_004229554.1 PFAM: phosphoribosyltransferase; KEGG: bgf:BC1003_3027 phosphoribosyltransferase YP_004229555.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bgf:BC1003_3028 multiple antibiotic resistance (MarC)-related protein YP_004229556.1 KEGG: bgf:BC1003_3029 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein YP_004229557.1 PFAM: NUDIX hydrolase; KEGG: bxe:Bxe_A0512 (di)nucleoside polyphosphate hydrolase YP_004229558.1 PFAM: protein of unknown function CNP1-like; KEGG: bgf:BC1003_3031 hypothetical protein YP_004229559.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: bgf:BC1003_3032 glutamate 5-kinase; SMART: PUA domain containing protein YP_004229560.1 KEGG: bgf:BC1003_3033 GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_004229561.1 KEGG: bgf:BC1003_3034 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_004229562.1 KEGG: bgf:BC1003_3035 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_004229563.1 PFAM: Polyprenyl synthetase; KEGG: bgf:BC1003_3036 polyprenyl synthetase YP_004229564.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bgf:BC1003_3037 hypothetical protein YP_004229565.1 KEGG: bgf:BC1003_3038 type II secretion system protein E; PFAM: type II secretion system protein E; SMART: ATPase AAA YP_004229566.1 PFAM: Type II secretion system F domain; KEGG: bgf:BC1003_3039 type II secretion system F domain-containing protein YP_004229567.1 KEGG: bgf:BC1003_3040 prepilin peptidase; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_004229568.1 TIGRFAM: dephospho-CoA kinase; KEGG: bgf:BC1003_3041 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_004229569.1 PFAM: protein of unknown function DUF1342; KEGG: bgf:BC1003_3042 hypothetical protein YP_004229570.1 PFAM: protein of unknown function DUF329; KEGG: bgf:BC1003_3043 hypothetical protein YP_004229571.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_3044 NUDIX hydrolase YP_004229572.1 KEGG: bgf:BC1003_3045 hypothetical protein; PFAM: protein of unknown function DUF815; SMART: ATPase AAA YP_004229573.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: bgf:BC1003_3046 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_004229574.1 manually curated; TIGRFAM: preprotein translocase, SecA subunit; KEGG: bgf:BC1003_3047 preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein YP_004229575.1 PFAM: protein of unknown function DUF721; KEGG: bxe:Bxe_A0494 hypothetical protein YP_004229576.1 KEGG: bgf:BC1003_3049 UDP-3-0-acyl N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_004229577.1 PFAM: Redoxin domain protein; KEGG: bgf:BC1003_3050 redoxin domain-containing protein YP_004229578.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; KEGG: bgf:BC1003_3051 cell division protein FtsZ; SMART: Tubulin/FtsZ, 2-layer sandwich domain YP_004229579.1 TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: bgf:BC1003_3052 cell division protein FtsA; SMART: cell division protein FtsA YP_004229580.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: bgf:BC1003_3053 cell division protein FtsQ YP_004229581.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: bgf:BC1003_3054 D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_004229582.1 KEGG: bgf:BC1003_3055 UDP-N-acetylmuramate/alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004229583.1 KEGG: bxe:Bxe_A0486 UDPdiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28 YP_004229584.1 KEGG: bgf:BC1003_3057 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_004229585.1 KEGG: bgf:BC1003_3058 UDP-N-acetylmuramoylalanine/D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004229586.1 KEGG: bgf:BC1003_3059 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004229587.1 KEGG: bgf:BC1003_3060 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D -alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004229588.1 KEGG: bgf:BC1003_3061 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004229589.1 KEGG: bgf:BC1003_3062 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004229590.1 KEGG: bgf:BC1003_3063 cell division protein FtsL; TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL YP_004229591.1 KEGG: bgf:BC1003_3064 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_004229592.1 KEGG: bgf:BC1003_3065 MraZ protein; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_004229593.1 PFAM: ubiquinone biosynthesis protein; KEGG: bgf:BC1003_3066 hypothetical protein YP_004229594.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_3067 porin gram-negative type YP_004229595.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_3068 AMP-dependent synthetase and ligase YP_004229596.1 KEGG: bgf:BC1003_3069 molybdopterin oxidoreductase; manually curated; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_004229597.1 TIGRFAM: amidohydrolase; KEGG: bgf:BC1003_3070 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004229598.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_3071 enoyl-CoA hydratase/isomerase YP_004229599.1 KEGG: bpy:Bphyt_3486 phenylacetic acid degradation protein PaaN; TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase YP_004229600.1 TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; KEGG: bgf:BC1003_3073 beta-ketoadipyl CoA thiolase; PFAM: Thiolase-like YP_004229601.1 KEGG: bgf:BC1003_3074 phenylacetate degradation, enoyl-CoA hydratase PaaB; TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase YP_004229602.1 KEGG: bgf:BC1003_3075 phenylacetic acid degradation protein PaaD; TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein YP_004229603.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: bgf:BC1003_3076 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004229604.1 PFAM: MltA domain protein; 3D domain-containing protein; KEGG: bgf:BC1003_3077 MltA domain-containing protein YP_004229605.1 KEGG: bgf:BC1003_3078 hypothetical protein YP_004229606.1 PFAM: ApaG domain protein; KEGG: bgf:BC1003_3079 ApaG domain-containing protein YP_004229607.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: bge:BC1002_2752 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_004229608.1 KEGG: bgf:BC1003_3081 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004229609.1 TIGRFAM: anthranilate synthase component I; KEGG: bgf:BC1003_3082 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_004229610.1 KEGG: bgf:BC1003_3083 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_004229611.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: bpy:Bphyt_3498 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_004229612.1 KEGG: bgf:BC1003_3085 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_004229613.1 PFAM: adenylate cyclase; KEGG: bgf:BC1003_3086 adenylate cyclase YP_004229614.1 KEGG: bgf:BC1003_3087 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: uracil-DNA glycosylase YP_004229615.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bgf:BC1003_3088 NAD(P)H dehydrogenase (quinone) YP_004229616.1 KEGG: bgf:BC1003_3089 peptidase M61 domain-containing protein; PFAM: peptidase M61 domain protein; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_004229617.1 PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: bgf:BC1003_3090 disulfide bond isomerase, DsbC/G-like protein YP_004229618.1 KEGG: bgf:BC1003_3091 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding YP_004229619.1 KEGG: bgf:BC1003_3092 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_004229620.1 KEGG: sye:Syncc9902_0645 cobalt ABC transporter permease YP_004229621.1 KEGG: tcu:Tcur_1002 inositol monophosphatase YP_004229622.1 KEGG: bps:BPSL0554 hypothetical protein YP_004229623.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_3093 extracellular solute-binding protein family 1 YP_004229624.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_3094 binding-protein-dependent transport systems inner membrane component YP_004229625.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0446 glycerol-3-phosphate transporter membrane protein YP_004229626.1 KEGG: bgf:BC1003_3096 ABC transporter; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: ATPase AAA YP_004229627.1 PFAM: Protein of unknown function DUF3761; KEGG: bgf:BC1003_3097 hypothetical protein YP_004229628.1 KEGG: bgf:BC1003_3098 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004229629.1 KEGG: bgf:BC1003_3100 hypothetical protein YP_004229630.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: bpy:Bphyt_3517 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_004229631.1 PFAM: peptidase M24; creatinase; KEGG: bgf:BC1003_3118 peptidase M24 YP_004229632.1 KEGG: bgf:BC1003_3119 hypothetical protein YP_004229633.1 KEGG: bgf:BC1003_3120 winged helix family two component transcriptional regulator; PFAM: transcriptional regulator domain-containing protein; response regulator receiver; SMART: transcriptional regulator domain-containing protein; response regulator receiver YP_004229634.1 KEGG: bgf:BC1003_3121 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase YP_004229635.1 KEGG: bgf:BC1003_3122 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: peptide chain release factor 1; PCRF domain protein YP_004229636.1 KEGG: bgf:BC1003_3123 protein-(glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004229637.1 KEGG: bgf:BC1003_3124 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin YP_004229638.1 KEGG: bgf:BC1003_3125 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_004229639.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bgf:BC1003_3126 extradiol ring-cleavage dioxygenase class III protein subunit B YP_004229640.1 PFAM: amino acid permease-associated region; KEGG: bgf:BC1003_3127 amino acid permease-associated region YP_004229641.1 KEGG: bgf:BC1003_3128 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004229642.1 PFAM: Heat shock protein 70; KEGG: bgf:BC1003_3129 chaperone YP_004229643.1 KEGG: bgf:BC1003_3130 major facilitator superfamily protein YP_004229644.1 PFAM: nitroreductase; KEGG: bgf:BC1003_3131 nitroreductase YP_004229645.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_3132 major facilitator superfamily protein YP_004229646.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_3133 regulatory protein TetR YP_004229647.1 PFAM: protein of unknown function DUF1415; KEGG: bgf:BC1003_3134 hypothetical protein YP_004229648.1 KEGG: bgf:BC1003_3135 hypothetical protein YP_004229649.1 KEGG: bgf:BC1003_3136 hypothetical protein YP_004229650.1 KEGG: bgf:BC1003_3137 hypothetical protein YP_004229651.1 PFAM: HI0933 family protein; KEGG: bgf:BC1003_3138 hypothetical protein YP_004229652.1 PFAM: methyltransferase small; KEGG: bgf:BC1003_3139 methyltransferase small YP_004229653.1 PFAM: Stringent starvation protein B; KEGG: bgf:BC1003_3140 stringent starvation protein B YP_004229654.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_3141 glutathione S-transferase YP_004229655.1 PFAM: cytochrome c1; KEGG: bgf:BC1003_3142 cytochrome c1 YP_004229656.1 PFAM: cytochrome b/b6 domain; KEGG: bgf:BC1003_3143 cytochrome b/b6 domain-containing protein YP_004229657.1 TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; KEGG: bgf:BC1003_3144 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal YP_004229658.1 PFAM: protein of unknown function DUF34; KEGG: bgf:BC1003_3145 hypothetical protein YP_004229659.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bgf:BC1003_3146 HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein YP_004229660.1 KEGG: bgf:BC1003_3147 sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_004229661.1 KEGG: bgf:BC1003_3148 twin-arginine translocation protein, TatB subunit; TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004229662.1 KEGG: bgf:BC1003_3149 twin-arginine translocation protein, TatA/E family subunit; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004229663.1 KEGG: bgf:BC1003_3150 histidine triad (HIT) protein YP_004229664.1 KEGG: bgf:BC1003_3151 hypothetical protein YP_004229665.1 KEGG: bgf:BC1003_3152 phosphoribosyl-ATP diphosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like YP_004229666.1 KEGG: bgf:BC1003_3153 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase YP_004229667.1 KEGG: bpy:Bphyt_3554 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_004229668.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: bgf:BC1003_3155 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein YP_004229669.1 KEGG: bgf:BC1003_3156 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_004229670.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bgf:BC1003_3157 multiple antibiotic resistance (MarC)-related protein YP_004229671.1 KEGG: bgf:BC1003_3158 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_004229672.1 KEGG: bgf:BC1003_3159 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004229673.1 TIGRFAM: histidinol dehydrogenase; KEGG: bgf:BC1003_3160 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004229674.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: bpy:Bphyt_3561 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region YP_004229675.1 KEGG: bgf:BC1003_3162 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004229676.1 PFAM: BolA family protein; KEGG: bgf:BC1003_3163 BolA family protein YP_004229677.1 PFAM: ABC transporter; KEGG: bgf:BC1003_3164 ABC transporter YP_004229678.1 KEGG: bgf:BC1003_3165 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004229679.1 KEGG: bgf:BC1003_3166 hypothetical protein YP_004229680.1 PFAM: toluene tolerance family protein; KEGG: bpy:Bphyt_3567 toluene tolerance family protein YP_004229681.1 PFAM: VacJ family lipoprotein; KEGG: bgf:BC1003_3168 VacJ family lipoprotein YP_004229682.1 PFAM: Mammalian cell entry related domain protein; KEGG: bgf:BC1003_3169 mammalian cell entry related domain-containing protein YP_004229683.1 PFAM: protein of unknown function DUF140; KEGG: bgf:BC1003_3170 hypothetical protein YP_004229684.1 KEGG: bgf:BC1003_3171 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004229685.1 KEGG: bgf:BC1003_3172 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_004229686.1 PFAM: thiazole biosynthesis family protein; KEGG: bgf:BC1003_3173 thiazole biosynthesis family protein YP_004229687.1 KEGG: bgf:BC1003_3174 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_004229688.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_3175 FAD dependent oxidoreductase YP_004229689.1 KEGG: bgf:BC1003_3176 ABC transporter domain-containing protein; PFAM: ABC transporter domain-containing protein; ABC transporter related; SMART: ATPase AAA YP_004229690.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3577 short-chain dehydrogenase/reductase SDR YP_004229691.1 KEGG: bgf:BC1003_3177 hypothetical protein YP_004229692.1 KEGG: bpy:Bphyt_3579 hypothetical protein YP_004229693.1 KEGG: bgf:BC1003_3179 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004229694.1 PFAM: flagellar L-ring protein; KEGG: bgf:BC1003_3180 flagellar L-ring protein YP_004229695.1 KEGG: bgf:BC1003_3181 hypothetical protein YP_004229696.1 KEGG: bgf:BC1003_3182 lipoprotein YP_004229697.1 KEGG: bgf:BC1003_3183 hypothetical protein YP_004229698.1 KEGG: bpy:Bphyt_3585 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004229699.1 KEGG: bgf:BC1003_3185 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_004229700.1 KEGG: bgf:BC1003_3187 protein tyrosine/serine phosphatase YP_004229701.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0370 major facilitator transporter YP_004229702.1 KEGG: bgf:BC1003_3188 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase YP_004229703.1 KEGG: bgf:BC1003_3189 glutamate synthase, NADH/NADPH small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004229704.1 KEGG: bgf:BC1003_3190 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II YP_004229705.1 KEGG: bgf:BC1003_3191 transposase IS200-family protein; PFAM: transposase IS200-family protein; SMART: AT hook, DNA-binding motif YP_004229706.1 PFAM: OmpW family protein; KEGG: bgf:BC1003_3192 OmpW family protein YP_004229707.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: bgf:BC1003_3193 hypothetical protein YP_004229708.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bgf:BC1003_3194 deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004229709.1 KEGG: bgf:BC1003_3195 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_004229710.1 KEGG: bgf:BC1003_3196 shikimate kinase; PFAM: shikimate kinase YP_004229711.1 KEGG: bgf:BC1003_3197 type IV pilus secretin PilQ; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein YP_004229712.1 KEGG: bgf:BC1003_3198 hypothetical protein YP_004229713.1 PFAM: Fimbrial assembly family protein; KEGG: bgf:BC1003_3199 fimbrial assembly family protein YP_004229714.1 KEGG: bgf:BC1003_3200 hypothetical protein YP_004229715.1 KEGG: bgf:BC1003_3201 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004229716.1 KEGG: bgf:BC1003_3202 iron donor protein CyaY; TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein YP_004229717.1 KEGG: bgf:BC1003_3203 lipoprotein YP_004229718.1 KEGG: bgf:BC1003_3204 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004229719.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: bgf:BC1003_3205 ferric reductase domain-containing protein protein transmembrane component domain-containing protein YP_004229720.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bgf:BC1003_3206 oxidoreductase molybdopterin-binding protein YP_004229721.1 KEGG: bgf:BC1003_3207 cytochrome c-type biogenesis protein CcsB; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein YP_004229722.1 KEGG: bgf:BC1003_3208 cytochrome c biogenesis protein YP_004229723.1 PFAM: cytochrome c class I; KEGG: bgf:BC1003_3209 cytochrome c class I YP_004229724.1 KEGG: bgf:BC1003_3210 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_004229725.1 KEGG: bgf:BC1003_3211 porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase YP_004229726.1 KEGG: bgf:BC1003_3212 protein-disulfide reductase; PFAM: cytochrome c biogenesis protein transmembrane region; thioredoxin YP_004229727.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: bgf:BC1003_3213 CutA1 divalent ion tolerance protein YP_004229728.1 KEGG: bge:BC1002_2870 ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_004229729.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: bpy:Bphyt_3618 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_004229730.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: bgf:BC1003_3216 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_004229731.1 KEGG: bgf:BC1003_3217 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_004229732.1 KEGG: bge:BC1002_2874 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_004229733.1 KEGG: bgf:BC1003_3219 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_004229734.1 KEGG: bgf:BC1003_3220 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_004229735.1 KEGG: bgf:BC1003_3221 preprotein translocase, SecY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_004229736.1 KEGG: bpr:GBP346_A3912 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15 YP_004229737.1 KEGG: bgf:BC1003_3223 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_004229738.1 KEGG: bgf:BC1003_3224 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5 YP_004229739.1 KEGG: bgf:BC1003_3225 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_004229740.1 KEGG: bgf:BC1003_3226 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_004229741.1 PFAM: ribosomal protein S8; KEGG: bgf:BC1003_3227 30S ribosomal protein S8 YP_004229742.1 PFAM: ribosomal protein S14; KEGG: bgf:BC1003_3228 30S ribosomal protein S14 YP_004229743.1 KEGG: bge:BC1002_2885 ribosomal protein L5 YP_004229744.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: bgf:BC1003_3230 50S ribosomal protein L24; SMART: KOW domain protein YP_004229745.1 KEGG: bgf:BC1003_3231 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_004229746.1 KEGG: bgf:BC1003_3232 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_004229747.1 KEGG: bgf:BC1003_3233 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_004229748.1 KEGG: bgf:BC1003_3234 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_004229749.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: bgf:BC1003_3235 30S ribosomal protein S3; SMART: KH domain protein YP_004229750.1 KEGG: bgf:BC1003_3236 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_004229751.1 KEGG: bgf:BC1003_3237 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_004229752.1 KEGG: bge:BC1002_2894 ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_004229753.1 PFAM: Ribosomal protein L25/L23; KEGG: bgf:BC1003_3239 ribosomal protein L25/L23 YP_004229754.1 PFAM: ribosomal protein L4/L1e; KEGG: bgf:BC1003_3240 50S ribosomal protein L4/L1e YP_004229755.1 KEGG: bgf:BC1003_3241 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_004229756.1 KEGG: bgf:BC1003_3242 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_004229757.1 KEGG: bgf:BC1003_3256 translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_004229758.1 KEGG: bgf:BC1003_3244 translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_004229759.1 KEGG: bgf:BC1003_3245 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_004229760.1 KEGG: bgf:BC1003_3246 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_004229761.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: bgf:BC1003_3247 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein YP_004229762.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 4; KEGG: bgf:BC1003_3248 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein YP_004229763.1 KEGG: bgf:BC1003_3249 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 7; RNA polymerase beta subunit; DNA-directed RNA polymerase, beta subunit, external 1 domain YP_004229764.1 KEGG: bgf:BC1003_3250 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_004229765.1 PFAM: ribosomal protein L10; KEGG: bgf:BC1003_3251 50S ribosomal protein L10 YP_004229766.1 KEGG: bgf:BC1003_3252 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_004229767.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: bgf:BC1003_3253 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_004229768.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: bgf:BC1003_3254 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein YP_004229769.1 KEGG: bgf:BC1003_3255 preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_004229770.1 KEGG: bgf:BC1003_3256 translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_004229771.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bgf:BC1003_3257 lipolytic protein G-D-S-L family YP_004229772.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_3258 FAD dependent oxidoreductase YP_004229773.1 KEGG: bgf:BC1003_3259 phenylacetate-CoA oxygenase, PaaG subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein YP_004229774.1 KEGG: bgf:BC1003_3260 phenylacetate-CoA oxygenase, PaaH subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B YP_004229775.1 KEGG: bgf:BC1003_3261 phenylacetate-CoA oxygenase, PaaI subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein YP_004229776.1 KEGG: bgf:BC1003_3262 phenylacetate-CoA oxygenase, PaaJ subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59 YP_004229777.1 KEGG: bgf:BC1003_3263 phenylacetate-CoA oxygenase/reductase, PaaK subunit; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin YP_004229778.1 PFAM: Domain of unknown function DUF1835; Protein of unknown function DUF3658; KEGG: bpy:Bphyt_3667 hypothetical protein YP_004229779.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_3265 regulatory protein TetR YP_004229780.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_3266 GCN5-related N-acetyltransferase YP_004229781.1 manually curated; PFAM: Transcription regulator AsnC-type-like; regulatory protein MarR; KEGG: bgf:BC1003_3267 AsnC family transcriptional regulator; SMART: Transcription regulator AsnC-type YP_004229782.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: bgf:BC1003_3268 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004229783.1 KEGG: bgf:BC1003_3269 hypothetical protein YP_004229784.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: bgf:BC1003_3270 indolepyruvate ferredoxin oxidoreductase YP_004229785.1 PFAM: phosphate acetyl/butaryl transferase; malic protein NAD-binding; malic protein domain protein; KEGG: bgf:BC1003_3271 malic protein NAD-binding protein YP_004229786.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_3675 major facilitator superfamily MFS_1 YP_004229787.1 KEGG: bgf:BC1003_3272 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004229788.1 KEGG: bgf:BC1003_3273 LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_004229789.1 PFAM: PEBP family protein; KEGG: bgf:BC1003_3274 PEBP family protein YP_004229790.1 SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: bgf:BC1003_3275 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding YP_004229791.1 PFAM: Protein of unknown function DUF2957; KEGG: bgf:BC1003_3276 lipoprotein YP_004229792.1 PFAM: Protein of unknown function DUF2957; KEGG: bgf:BC1003_3277 lipoprotein YP_004229793.1 PFAM: OmpW family protein; KEGG: bgf:BC1003_3278 OmpW family protein YP_004229794.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_3279 lysine exporter protein LysE/YggA YP_004229795.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bgf:BC1003_3280 6-phosphogluconate dehydrogenase NAD-binding protein YP_004229796.1 KEGG: bgf:BC1003_3281 hypothetical protein; manually curated; PFAM: protein of unknown function DUF82 YP_004229797.1 KEGG: bxe:Bxe_A0269 hypothetical protein YP_004229798.1 KEGG: bgf:BC1003_3283 hypothetical protein YP_004229799.1 KEGG: bgf:BC1003_3284 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004229800.1 KEGG: bgf:BC1003_3285 hypothetical protein YP_004229801.1 PFAM: Protein of unknown function DUF2242; KEGG: bgf:BC1003_3286 hypothetical protein YP_004229802.1 PFAM: Lytic transglycosylase catalytic; KEGG: bgf:BC1003_3287 lytic transglycosylase catalytic YP_004229803.1 KEGG: bxe:Bxe_A0261 hypothetical protein YP_004229804.1 KEGG: bgf:BC1003_3291 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II YP_004229805.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: bgf:BC1003_3292 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein YP_004229806.1 PFAM: PP-loop domain protein; KEGG: bgf:BC1003_3293 PP-loop domain-containing protein YP_004229807.1 KEGG: bpy:Bphyt_3731 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; SMART: dihydroneopterin aldolase YP_004229808.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_3295 short-chain dehydrogenase/reductase SDR YP_004229809.1 PFAM: protein of unknown function DUF185; KEGG: bgf:BC1003_3296 hypothetical protein YP_004229810.1 PFAM: Protein of unknown function DUF2905; KEGG: bgf:BC1003_3297 hypothetical protein YP_004229811.1 KEGG: bgf:BC1003_3298 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004229812.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_3299 glutathione S-transferase YP_004229813.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_3300 NAD-dependent epimerase/dehydratase YP_004229814.1 PFAM: Lytic transglycosylase catalytic; KEGG: bgf:BC1003_3301 lytic transglycosylase catalytic YP_004229815.1 KEGG: bgf:BC1003_3302 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004229816.1 KEGG: bgf:BC1003_3303 MarR family transcriptional regulator YP_004229817.1 KEGG: bgf:BC1003_3304 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_004229818.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: bgf:BC1003_3305 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2 YP_004229819.1 PFAM: LamB/YcsF family protein; KEGG: bgf:BC1003_3306 LamB/YcsF family protein YP_004229820.1 PFAM: protein of unknown function DUF969; KEGG: bgf:BC1003_3307 hypothetical protein YP_004229821.1 PFAM: protein of unknown function DUF979; KEGG: bgf:BC1003_3308 hypothetical protein YP_004229822.1 KEGG: bgf:BC1003_3309 tetratricopeptide repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; glycosyl transferase family 9; SMART: Tetratricopeptide repeat YP_004229823.1 PFAM: SpoVT/AbrB domain-containing protein; KEGG: atu:Atu0939 PemI protein YP_004229824.1 PFAM: PemK family protein; KEGG: atu:Atu0940 PemK protein YP_004229825.1 PFAM: GumN family protein; KEGG: bgf:BC1003_3310 GumN family protein YP_004229826.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bgf:BC1003_3311 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: ATPase AAA YP_004229827.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bgf:BC1003_3312 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: ATPase AAA YP_004229828.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_3313 binding-protein-dependent transport systems inner membrane component YP_004229829.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_3753 alkaline phosphatase YP_004229830.1 PFAM: extracellular solute-binding protein family 5; KEGG: bgf:BC1003_3315 extracellular solute-binding protein family 5 YP_004229831.1 KEGG: bfo:BRAFLDRAFT_69127 hypothetical protein YP_004229832.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: bgf:BC1003_3316 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_004229833.1 PFAM: membrane protein of unknown function; KEGG: bgf:BC1003_3317 membrane protein of unknown function YP_004229834.1 TIGRFAM: adenosylhomocysteinase; KEGG: bgf:BC1003_3318 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_004229835.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_3319 glycosyl transferase family 2 YP_004229836.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_3320 LysR family transcriptional regulator YP_004229837.1 KEGG: bgf:BC1003_3321 glucose-methanol-choline oxidoreductase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase YP_004229838.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_3322 acyl-CoA dehydrogenase domain-containing protein YP_004229839.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_3323 aldehyde dehydrogenase YP_004229840.1 PFAM: type III secretion exporter; KEGG: bgf:BC1003_3324 type III secretion exporter YP_004229841.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: bgf:BC1003_3325 hypothetical protein YP_004229842.1 PFAM: flagellar export chaperone; KEGG: bgf:BC1003_3326 flagellar export chaperone YP_004229843.1 KEGG: bgf:BC1003_3327 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_004229844.1 KEGG: bgf:BC1003_3328 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_004229845.1 KEGG: bgf:BC1003_3329 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_004229846.1 KEGG: bgf:BC1003_3330 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_004229847.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: bgf:BC1003_3331 flagellar assembly protein FliH/type III secretion system HrpE YP_004229848.1 TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: bgf:BC1003_3332 flagellar protein export ATPase FliI; SMART: ATPase AAA YP_004229849.1 KEGG: bgf:BC1003_3333 flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein YP_004229850.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: bgf:BC1003_3334 flagellar hook-length control protein-like, C-terminal domain-containing protein YP_004229851.1 PFAM: flagellar basal body-associated protein FliL; KEGG: bgf:BC1003_3335 flagellar basal body-associated protein FliL YP_004229852.1 KEGG: bgf:BC1003_3336 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_004229853.1 KEGG: bgf:BC1003_3337 flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein YP_004229854.1 TIGRFAM: flagellar biosynthetic protein FliO; KEGG: bgf:BC1003_3338 flagellar biosynthetic protein FliO YP_004229855.1 KEGG: bgf:BC1003_3339 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_004229856.1 KEGG: bgf:BC1003_3340 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_004229857.1 KEGG: bgf:BC1003_3341 flagellar biosynthetic protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_004229858.1 KEGG: bgf:BC1003_3342 flagellar hook-associated protein 3; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_004229859.1 KEGG: bgf:BC1003_3343 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004229860.1 PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: bgf:BC1003_3344 YcgR family protein YP_004229861.1 KEGG: bgf:BC1003_3345 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like YP_004229862.1 PFAM: flagellar P-ring protein; KEGG: bgf:BC1003_3346 flagellar P-ring protein YP_004229863.1 PFAM: flagellar L-ring protein; KEGG: bgf:BC1003_3347 flagellar L-ring protein YP_004229864.1 KEGG: bgf:BC1003_3348 flagellar basal-body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004229865.1 KEGG: bgf:BC1003_3349 flagellar basal-body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004229866.1 KEGG: bgf:BC1003_3350 fagellar hook-basal body protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004229867.1 PFAM: flagellar hook capping protein; KEGG: bgf:BC1003_3351 flagellar hook capping protein YP_004229868.1 KEGG: bxe:Bxe_A0141 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004229869.1 KEGG: bgf:BC1003_3353 flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_004229870.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: bgf:BC1003_3354 flagella basal body P-ring formation protein FlgA; SMART: SAF domain protein YP_004229871.1 KEGG: bgf:BC1003_3355 anti-sigma-28 factor FlgM family protein; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein YP_004229872.1 PFAM: FlgN family protein; KEGG: bgf:BC1003_3356 FlgN family protein YP_004229873.1 PFAM: YcfA family protein; KEGG: bgf:BC1003_3357 YcfA family protein YP_004229874.1 PFAM: Uncharacterised protein family UPF0150; KEGG: bgf:BC1003_3358 hypothetical protein YP_004229875.1 KEGG: bgf:BC1003_3359 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein YP_004229876.1 KEGG: bgf:BC1003_3360 flagellar biosynthesis protein FlhG YP_004229877.1 TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: bgf:BC1003_3361 flagellar biosynthetic protein FlhF; SMART: ATPase AAA YP_004229878.1 KEGG: bgf:BC1003_3362 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_004229879.1 KEGG: bgf:BC1003_3363 flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_004229880.1 PFAM: Protein of unknown function DUF3443; KEGG: bgf:BC1003_3364 hypothetical protein YP_004229881.1 PFAM: Protein of unknown function DUF2844; KEGG: bgf:BC1003_3365 hypothetical protein YP_004229882.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: bgf:BC1003_3366 chemotaxis phosphatase, CheZ YP_004229883.1 KEGG: bgf:BC1003_3367 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004229884.1 PFAM: chemotaxis protein CheB; response regulator receiver; KEGG: bgf:BC1003_3368 response regulator receiver modulated chemotaxis protein CheB; SMART: response regulator receiver YP_004229885.1 PFAM: CheD family protein; KEGG: bgf:BC1003_3369 CheD YP_004229886.1 PFAM: MCP methyltransferase CheR-type; KEGG: bgf:BC1003_3370 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type YP_004229887.1 KEGG: bgf:BC1003_3371 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004229888.1 KEGG: bgf:BC1003_3372 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein YP_004229889.1 KEGG: bgf:BC1003_3373 chemotaxis protein CheA; PFAM: CheY binding protein; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_004229890.1 KEGG: bgf:BC1003_3374 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004229891.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_3375 OmpA/MotB domain-containing protein YP_004229892.1 KEGG: bgf:BC1003_3376 flagellar motor protein MotA YP_004229893.1 PFAM: flagellar transcriptional activator FlhC; KEGG: bgf:BC1003_3377 flagellar transcriptional activator FlhC YP_004229894.1 PFAM: flagellar transcriptional activator; KEGG: bxe:Bxe_A0114 transcriptional activator FlhD YP_004229895.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_3379 glycosyl transferase group 1 YP_004229896.1 KEGG: bgf:BC1003_3380 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004229897.1 KEGG: bgf:BC1003_3381 MIP family channel protein; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_004229898.1 KEGG: bpy:Bphyt_3825 hypothetical protein YP_004229899.1 KEGG: bgf:BC1003_3382 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004229900.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: bgf:BC1003_3384 ATPase BadF/BadG/BcrA/BcrD type YP_004229901.1 KEGG: bgf:BC1003_3385 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_004229902.1 KEGG: bgf:BC1003_3386 hypothetical protein YP_004229903.1 KEGG: bgf:BC1003_3387 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_004229904.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_3831 aldo/keto reductase YP_004229905.1 PFAM: flagellin domain protein; KEGG: bgf:BC1003_3389 flagellin domain-containing protein YP_004229906.1 PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; KEGG: bgf:BC1003_3390 flagellar hook-associated 2 domain-containing protein YP_004229907.1 KEGG: bgf:BC1003_3391 hypothetical protein YP_004229908.1 SMART: Tetratricopeptide repeat; KEGG: bgf:BC1003_3392 tetratricopeptide repeat-containing protein YP_004229909.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bgf:BC1003_3393 DegT/DnrJ/EryC1/StrS aminotransferase YP_004229910.1 KEGG: bgf:BC1003_3394 streptogramin acetyl transferase YP_004229911.1 KEGG: bgf:BC1003_3395 transketolase domain-containing protein; PFAM: Transketolase central region; Transketolase domain-containing protein; SMART: Transketolase central region YP_004229912.1 PFAM: Transketolase domain-containing protein; KEGG: bgf:BC1003_3396 transketolase domain-containing protein YP_004229913.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_3397 short-chain dehydrogenase/reductase SDR YP_004229914.1 KEGG: bgf:BC1003_3398 hypothetical protein YP_004229915.1 PFAM: GMC oxidoreductase; glucose-methanol-choline oxidoreductase; KEGG: bgf:BC1003_3399 glucose-methanol-choline oxidoreductase YP_004229916.1 PFAM: beta-hydroxyacyl-ACP dehydratase; KEGG: bgf:BC1003_3400 beta-hydroxyacyl-ACP dehydratase YP_004229917.1 PFAM: acyl-CoA reductase; KEGG: bgf:BC1003_3401 acyl-CoA reductase YP_004229918.1 KEGG: bgf:BC1003_3402 hypothetical protein YP_004229919.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_3403 AMP-dependent synthetase and ligase YP_004229920.1 KEGG: bgf:BC1003_3404 hypothetical protein YP_004229921.1 TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: bgf:BC1003_3405 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family YP_004229922.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bgf:BC1003_3406 sodium/calcium exchanger membrane region YP_004229923.1 KEGG: bac:BamMC406_0153 hypothetical protein YP_004229924.1 PFAM: AAA-4 family protein; KEGG: bac:BamMC406_0152 transcriptional regulator YP_004229925.1 KEGG: dal:Dalk_5058 hypothetical protein YP_004229926.1 KEGG: ecg:E2348C_2880 hypothetical protein YP_004229927.1 KEGG: bgl:bglu_1g01490 GP5, phage portal protein, pbsx family protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_004229928.1 KEGG: bps:BPSS1063 bacteriophage terminase, ATPase subunit YP_004229929.1 PFAM: capsid scaffolding; KEGG: ypy:YPK_2328 capsid scaffolding YP_004229930.1 KEGG: sbn:Sbal195_2914 P2 family phage major capsid protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2 YP_004229931.1 PFAM: small terminase subunit; KEGG: bgl:bglu_1g01450 hypothetical protein YP_004229932.1 PFAM: head completion protein; KEGG: bps:BPSS1067 bacteriophage head completion/stabilization protein YP_004229933.1 PFAM: tail X family protein; KEGG: bcj:BCAL0107 phage tail protein YP_004229934.1 KEGG: bcj:BCAL0106 phage membrane protein YP_004229935.1 PFAM: protein of unknown function DUF754; KEGG: bcj:BCAL0105 phage membrane protein YP_004229936.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bcj:BCAL0104 phage-encoded peptidoglycan binding protein YP_004229937.1 KEGG: bcj:BCAL0102 phage tail completion protein R YP_004229938.1 TIGRFAM: phage virion morphogenesis protein; KEGG: bte:BTH_II1340 phage virion morphogenesis protein YP_004229939.1 TIGRFAM: phage baseplate assembly protein V; KEGG: bcj:BCAL0101 phage baseplate assembly protein YP_004229940.1 PFAM: GPW/gp25 family protein; KEGG: bcj:BCAL0100 phage baseplate assembly protein W YP_004229941.1 PFAM: Baseplate J family protein; KEGG: cti:RALTA_A0917 bacteriophage P2 baseplate assembly protein GPJ YP_004229942.1 TIGRFAM: phage tail protein I; KEGG: bam:Bamb_1863 phage tail protein I YP_004229943.1 KEGG: bpr:GBP346_A2705 GP26 YP_004229944.1 PFAM: tail assembly chaperone gp38; KEGG: bpr:GBP346_A2704 hypothetical protein YP_004229945.1 KEGG: bcj:BCAL0095 phage major tail sheath protein YP_004229946.1 KEGG: bcj:BCAL0094 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein YP_004229947.1 PFAM: tail E family protein; KEGG: bcj:BCAL0093 phage tail protein YP_004229948.1 PFAM: P2 GpE family protein; KEGG: bcj:BCAL0092 phage tail-associated protein YP_004229949.1 KEGG: bte:BTH_II1327 phage-related tail transmembrane protein YP_004229950.1 PFAM: P2 GpU family protein; KEGG: bcj:BCAL0090 phage tail assembly protein YP_004229951.1 KEGG: bte:BTH_II1325 fels-2 prophage protein YP_004229952.1 KEGG: bcj:BCAM1081 hypothetical protein YP_004229953.1 KEGG: bpd:BURPS668_2651 hypothetical protein YP_004229954.1 KEGG: bps:BPSL0142 phage-encoded membrane protein YP_004229955.1 KEGG: bps:BPSL0141 phage DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004229956.1 KEGG: bmj:BMULJ_03649 probable bacteriophage protein YP_004229957.1 KEGG: bps:BPSL0139 phage DNA-binding protein YP_004229958.1 PFAM: transcriptional activator Ogr/delta; KEGG: bps:BPSL0138 hypothetical protein YP_004229959.1 KEGG: bps:BPSL0136 hypothetical protein YP_004229960.1 KEGG: bmj:BMULJ_03645 probable bacteriophage protein YP_004229961.1 KEGG: bps:BPSL0134 phage-encoded membrane protein YP_004229962.1 KEGG: bmj:BMULJ_03643 probable bacteriophage protein YP_004229963.1 KEGG: bmj:BMULJ_03642 probable bacteriophage protein YP_004229964.1 SMART: Toprim sub domain-containing protein; KEGG: bmj:BMULJ_03641 probable bacteriophage protein YP_004229965.1 PFAM: integrase family protein; KEGG: bgl:bglu_1g01090 site-specific recombinase, phage integrase family protein YP_004229966.1 PFAM: cytochrome c class I; KEGG: bgf:BC1003_3420 cytochrome c class I YP_004229967.1 PFAM: UvrD/REP helicase; KEGG: bgf:BC1003_3421 UvrD/REP helicase YP_004229968.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bgf:BC1003_3422 oxidoreductase domain-containing protein YP_004229969.1 KEGG: bgf:BC1003_3423 lipoprotein YP_004229970.1 KEGG: bgf:BC1003_3424 glycine cleavage system T protein; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_004229971.1 KEGG: bpy:Bphyt_3881 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_004229972.1 KEGG: bgf:BC1003_3426 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like YP_004229973.1 KEGG: bgf:BC1003_3427 hypothetical protein YP_004229974.1 TIGRFAM: L-serine dehydratase 1; KEGG: bgf:BC1003_3428 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_004229975.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: bgf:BC1003_3429 thiamine pyrophosphate TPP-binding domain-containing protein YP_004229976.1 KEGG: bgf:BC1003_3430 hypothetical protein YP_004229977.1 KEGG: bgf:BC1003_3431 isobutylamine N-hydroxylase YP_004229978.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_3432 FAD dependent oxidoreductase YP_004229979.1 KEGG: bgf:BC1003_3433 hypothetical protein YP_004229980.1 KEGG: bgf:BC1003_3434 integral membrane protein YP_004229981.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_3435 glutathione S-transferase YP_004229982.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bgf:BC1003_3436 isoprenylcysteine carboxyl methyltransferase YP_004229983.1 PFAM: cytochrome P450; KEGG: bgf:BC1003_3437 cytochrome P450 YP_004229984.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_3438 AMP-dependent synthetase and ligase YP_004229985.1 PFAM: aminotransferase class-III; phosphopantetheine-binding; KEGG: bgf:BC1003_3439 aminotransferase class-III YP_004229986.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_3440 extracellular ligand-binding receptor YP_004229987.1 KEGG: bgf:BC1003_3441 delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase YP_004229988.1 KEGG: bgf:BC1003_3442 hypothetical protein YP_004229989.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: bgf:BC1003_3443 primosomal protein N'; SMART: DEAD-like helicase ; helicase domain protein YP_004229990.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: bgf:BC1003_3444 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_004229991.1 PFAM: extracellular solute-binding protein family 3; KEGG: bpy:Bphyt_3891 arogenate dehydratase; SMART: extracellular solute-binding protein family 3 YP_004229992.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_3446 AMP-dependent synthetase and ligase YP_004229993.1 KEGG: bgf:BC1003_3447 ATP synthase F1 subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like YP_004229994.1 TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: bgf:BC1003_3448 ATP synthase F1 subunit beta; SMART: ATPase AAA YP_004229995.1 KEGG: bgf:BC1003_3449 ATP synthase F1 subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_004229996.1 KEGG: bgf:BC1003_3450 ATP synthase F1 subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_004229997.1 KEGG: bgf:BC1003_3451 ATP synthase F1 subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_004229998.1 KEGG: bpy:Bphyt_3898 F0F1 ATP synthase subunit B; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_004229999.1 KEGG: bgf:BC1003_3453 ATP synthase F0 subunit C; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_004230000.1 KEGG: bgf:BC1003_3454 ATP synthase F0 subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_004230001.1 PFAM: ATP synthase I chain; KEGG: bgf:BC1003_3455 ATP synthase I chain YP_004230002.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bgf:BC1003_3456 ParB-like partition protein; SMART: ParB domain protein nuclease YP_004230003.1 KEGG: bgf:BC1003_3457 cobyrinic acid ac-diamide synthase YP_004230004.1 KEGG: bgf:BC1003_3458 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_004230005.1 KEGG: bpy:Bphyt_3905 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_004230006.1 KEGG: bgf:BC1003_3460 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004230007.1 KEGG: bgf:BC1003_3461 ABC transporter; PFAM: inner-membrane translocator; ABC transporter related; SMART: ATPase AAA YP_004230008.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_3462 inner-membrane translocator YP_004230009.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_3463 extracellular ligand-binding receptor YP_004230010.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_3464 extracellular ligand-binding receptor YP_004230011.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_3465 inner-membrane translocator YP_004230012.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_3466 inner-membrane translocator YP_004230013.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_3467 extracellular ligand-binding receptor YP_004230014.1 KEGG: bgf:BC1003_3468 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004230015.1 KEGG: bgf:BC1003_3469 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004230016.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bgf:BC1003_3470 glucose-methanol-choline oxidoreductase YP_004230017.1 KEGG: bgf:BC1003_3471 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004230018.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_3472 LysR family transcriptional regulator YP_004230019.1 PFAM: adenylate cyclase; KEGG: bxe:Bxe_A0013 adenylate cyclase YP_004230020.1 KEGG: bpy:Bphyt_3920 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004230021.1 PFAM: Protein of unknown function DUF3717; KEGG: bgf:BC1003_3475 hypothetical protein YP_004230022.1 KEGG: bgf:BC1003_3476 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004230023.1 KEGG: bgf:BC1003_3477 integral membrane sensor signal transduction histidine kinase; PFAM: Two-component sensor kinase domain-containing protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004230024.1 KEGG: bgf:BC1003_3478 nuclear protein SET; PFAM: nuclear protein SET; SMART: nuclear protein SET; SET-related domain protein YP_004230025.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bgf:BC1003_3479 NADH:flavin oxidoreductase/NADH oxidase YP_004230026.1 PFAM: glutamine amidotransferase class-I; KEGG: bgf:BC1003_3480 glutamine amidotransferase class-I YP_004230027.1 KEGG: bgf:BC1003_3481 regulatory protein MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004230028.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: bgf:BC1003_3482 glutamate--cysteine ligase GCS2 YP_004230029.1 PFAM: sodium/hydrogen exchanger; KEGG: bgf:BC1003_3483 sodium/hydrogen exchanger YP_004230030.1 KEGG: bgf:BC1003_3484 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752 YP_004230031.1 KEGG: bgf:BC1003_3485 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004230032.1 KEGG: bgf:BC1003_3486 cobalamin synthesis protein P47K; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SMART: cobalamin synthesis CobW domain protein YP_004230033.1 PFAM: Lytic transglycosylase catalytic; KEGG: bgf:BC1003_3487 lytic transglycosylase catalytic YP_004230034.1 KEGG: bgf:BC1003_3488 general secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein YP_004230035.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: bgf:BC1003_3489 general secretory pathway protein E; SMART: ATPase AAA YP_004230036.1 KEGG: bgf:BC1003_3490 general secretion pathway protein F; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain YP_004230037.1 KEGG: bgf:BC1003_3491 general secretory pathway protein C YP_004230038.1 KEGG: bgf:BC1003_3492 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G YP_004230039.1 TIGRFAM: general secretion pathway protein H; KEGG: bgf:BC1003_3493 general secretion pathway protein H YP_004230040.1 KEGG: bgf:BC1003_3494 general secretion pathway protein I; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J YP_004230041.1 KEGG: bgf:BC1003_3495 general secretory pathway protein J YP_004230042.1 KEGG: bgf:BC1003_3496 general secretion pathway protein K YP_004230043.1 KEGG: bgf:BC1003_3497 general secretion pathway protein L; TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L YP_004230044.1 PFAM: General secretion pathway M protein; KEGG: bgf:BC1003_3498 general secretion pathway M protein YP_004230045.1 KEGG: bgf:BC1003_3499 general secretory pathway protein N YP_004230046.1 KEGG: bgf:BC1003_3500 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004230047.1 KEGG: bpy:Bphyt_3949 hypothetical protein YP_004230048.1 KEGG: bgf:BC1003_3502 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004230049.1 KEGG: bgf:BC1003_3503 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004230050.1 KEGG: bpy:Bphyt_3952 hypothetical protein YP_004230051.1 KEGG: bgf:BC1003_3505 glutamate/cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase YP_004230052.1 PFAM: AlkA domain protein; HhH-GPD family protein; KEGG: bpy:Bphyt_3954 AlkA domain protein; SMART: HhH-GPD family protein YP_004230053.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Ada metal-binding domain-containing protein; methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein; KEGG: bgf:BC1003_3507 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain YP_004230054.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bgf:BC1003_3508 glyoxalase/bleomycin resistance protein/dioxygenase YP_004230055.1 PFAM: YaeQ family protein; KEGG: bgf:BC1003_3509 YaeQ family protein YP_004230056.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_3510 LysR family transcriptional regulator YP_004230057.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_3511 aldehyde dehydrogenase YP_004230058.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bgf:BC1003_3512 periplasmic-binding protein/LacI transcriptional regulator YP_004230059.1 KEGG: bgf:BC1003_3513 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004230060.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_3514 inner-membrane translocator YP_004230061.1 KEGG: bgf:BC1003_3515 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004230062.1 KEGG: bgf:BC1003_3516 hypothetical protein YP_004230063.1 KEGG: bgf:BC1003_3517 hypothetical protein YP_004230064.1 PFAM: histidine triad (HIT) protein; KEGG: bgf:BC1003_3518 histidine triad (HIT) protein YP_004230065.1 KEGG: bpy:Bphyt_3971 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004230066.1 KEGG: bgf:BC1003_3519 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; TIGRFAM: alpha-ketoglutarate dehydrogenase; 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain-containing protein YP_004230067.1 KEGG: bgf:BC1003_3520 hypothetical protein YP_004230068.1 KEGG: bgf:BC1003_3521 hypothetical protein YP_004230069.1 PFAM: integrase family protein; KEGG: bgf:BC1003_3522 integrase family protein YP_004230070.1 KEGG: bgf:BC1003_3523 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_004230071.1 KEGG: bgf:BC1003_3524 hypothetical protein YP_004230072.1 KEGG: bgf:BC1003_3525 membrane protein insertase, YidC/Oxa1 family domain containing protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing; membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_004230073.1 PFAM: protein of unknown function DUF37; KEGG: bgf:BC1003_3526 hypothetical protein YP_004230074.1 KEGG: bgf:BC1003_3527 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein YP_004230075.1 KEGG: bgf:BC1003_3528 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34 YP_004230076.1 KEGG: bgf:BC1003_3662 hypothetical protein YP_004230077.1 PFAM: KfrA, N-terminal DNA-binding domain; KEGG: bgf:BC1003_3663 hypothetical protein YP_004230078.1 KEGG: bgf:BC1003_3664 L-sorbosone dehydrogenase YP_004230079.1 manually curated; PFAM: alpha amylase catalytic region; KEGG: bgf:BC1003_3665 alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004230080.1 KEGG: bgf:BC1003_3666 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004230081.1 KEGG: bgf:BC1003_3667 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004230082.1 KEGG: bgf:BC1003_3668 signal peptide protein YP_004230083.1 KEGG: bgf:BC1003_3669 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein YP_004230084.1 KEGG: bgf:BC1003_3670 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004230085.1 PFAM: CheC domain protein; KEGG: bgf:BC1003_3671 CheC, inhibitor of MCP methylation YP_004230086.1 KEGG: bgf:BC1003_3672 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004230087.1 KEGG: bgf:BC1003_3673 hypothetical protein YP_004230088.1 KEGG: bgf:BC1003_3674 hypothetical protein YP_004230089.1 PFAM: protein of unknown function DUF72; KEGG: bgf:BC1003_3675 hypothetical protein YP_004230090.1 KEGG: bgf:BC1003_3676 uracil-DNA glycosylase superfamily; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily YP_004230091.1 KEGG: bgf:BC1003_3677 hypothetical protein YP_004230092.1 KEGG: bgf:BC1003_3678 hypothetical protein YP_004230093.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_3679 acyl-CoA dehydrogenase domain-containing protein YP_004230094.1 KEGG: bgf:BC1003_3680 hypothetical protein YP_004230095.1 PFAM: protein of unknown function DUF480; KEGG: bgf:BC1003_3681 hypothetical protein YP_004230096.1 KEGG: bxe:Bxe_B1348 D-amino acid dehydrogenase small subunit; PFAM: FAD dependent oxidoreductase YP_004230097.1 PFAM: transport-associated; KEGG: bgf:BC1003_3683 transport-associated protein YP_004230098.1 KEGG: bgf:BC1003_3684 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_004230099.1 KEGG: bgf:BC1003_3685 phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YP_004230100.1 KEGG: bgf:BC1003_3686 hypothetical protein YP_004230101.1 SMART: Ankyrin; KEGG: bgf:BC1003_3687 ankyrin YP_004230102.1 KEGG: bgf:BC1003_3688 haloacid dehalogenase domain-containing protein hydrolase YP_004230103.1 KEGG: bgf:BC1003_3689 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain-containing protein YP_004230104.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_3690 major facilitator superfamily protein YP_004230105.1 PFAM: Thioredoxin domain-containing protein; KEGG: bgf:BC1003_3691 thioredoxin domain-containing protein YP_004230106.1 PFAM: protein of unknown function UPF0047; KEGG: bgf:BC1003_3692 hypothetical protein YP_004230107.1 KEGG: bgf:BC1003_3693 fructose-bisphosphate aldolase; PFAM: fructose-bisphosphate aldolase class-I YP_004230108.1 KEGG: bgf:BC1003_3694 hypothetical protein YP_004230109.1 KEGG: bgf:BC1003_3695 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004230110.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: bgf:BC1003_3696 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004230111.1 KEGG: bgf:BC1003_3697 hypothetical protein YP_004230112.1 PFAM: protein of unknown function UPF0118; KEGG: bgf:BC1003_3698 hypothetical protein YP_004230113.1 KEGG: bgf:BC1003_3699 hypothetical protein YP_004230114.1 KEGG: bgf:BC1003_3700 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region YP_004230115.1 PFAM: PRC-barrel domain protein; KEGG: bgf:BC1003_3701 PRC-barrel domain-containing protein YP_004230116.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bgf:BC1003_3702 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein YP_004230117.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bgf:BC1003_3703 molybdopterin dehydrogenase FAD-binding protein YP_004230118.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: bgf:BC1003_3704 (2Fe-2S)-binding domain-containing protein YP_004230119.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_3705 short-chain dehydrogenase/reductase SDR YP_004230120.1 KEGG: bgf:BC1003_3706 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004230121.1 PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: bgf:BC1003_3707 ATP dependent DNA ligase YP_004230122.1 KEGG: bgf:BC1003_3708 putative exonuclease involved in mRNA processing YP_004230123.1 KEGG: bgf:BC1003_3709 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_004230124.1 PFAM: AFG1-family ATPase; KEGG: bgf:BC1003_3710 AFG1-family ATPase YP_004230125.1 KEGG: bgf:BC1003_3711 hypothetical protein YP_004230126.1 TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: bgf:BC1003_3712 transketolase; SMART: Transketolase central region YP_004230127.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bgf:BC1003_3713 cupin domain-containing protein YP_004230128.1 KEGG: bgf:BC1003_3714 hypothetical protein YP_004230129.1 KEGG: bgf:BC1003_3715 hypothetical protein YP_004230130.1 KEGG: bgf:BC1003_3716 hypothetical protein YP_004230131.1 KEGG: bgf:BC1003_3717 hypothetical protein YP_004230132.1 KEGG: bgf:BC1003_3718 hypothetical protein YP_004230133.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_3719 porin gram-negative type YP_004230134.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bpy:Bphyt_5308 cobaltochelatase; SMART: AAA ATPase YP_004230135.1 SMART: von Willebrand factor type A; KEGG: bxe:Bxe_B1300 putative cobalamin biosynthesis protein CobT YP_004230136.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bgf:BC1003_3720 multiple antibiotic resistance (MarC)-related protein YP_004230137.1 PFAM: Protein of unknown function DUF3311; KEGG: bgf:BC1003_3721 hypothetical protein YP_004230138.1 PFAM: Na+/solute symporter; KEGG: bgf:BC1003_3722 Na+/solute symporter YP_004230139.1 manually curated; TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: bgf:BC1003_3723 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1 YP_004230140.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bgf:BC1003_3724 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004230141.1 KEGG: bgf:BC1003_3725 hypothetical protein YP_004230142.1 PFAM: blue (type 1) copper domain protein; KEGG: bxe:Bxe_B1272 hypothetical protein YP_004230143.1 PFAM: metallophosphoesterase; KEGG: bxe:Bxe_B1271 hypothetical protein YP_004230144.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: bgf:BC1003_3726 peptidase M1 membrane alanine aminopeptidase YP_004230145.1 PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: bgf:BC1003_3727 epoxide hydrolase domain-containing protein YP_004230146.1 PFAM: LrgA family protein; KEGG: bgf:BC1003_3728 LrgA family protein YP_004230147.1 PFAM: LrgB family protein; KEGG: bgf:BC1003_3729 LrgB family protein YP_004230148.1 KEGG: bph:Bphy_7015 type VI secretion protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_004230150.1 KEGG: bph:Bphy_5198 hypothetical protein YP_004230151.1 manually curated; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; KEGG: bph:Bphy_5197 type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345 YP_004230152.1 KEGG: bxe:Bxe_B2596 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_004230153.1 KEGG: bgf:BC1003_3730 alpha,alpha-trehalase; PFAM: glycoside hydrolase family 37 YP_004230154.1 KEGG: bgf:BC1003_3731 DNA-N1-methyladenine dioxygenase YP_004230155.1 KEGG: bgf:BC1003_3732 carbonate dehydratase; PFAM: carbonic anhydrase YP_004230156.1 PFAM: protein of unknown function DUF1488; KEGG: bgf:BC1003_3733 hypothetical protein YP_004230157.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_3734 major facilitator superfamily protein YP_004230158.1 TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: bgf:BC1003_3735 precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004230159.1 KEGG: bgf:BC1003_3736 precorrin-6A reductase; PFAM: Precorrin-6x reductase CbiJ/CobK YP_004230160.1 KEGG: bgf:BC1003_3737 cobalamin biosynthesis protein CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein YP_004230161.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: bgf:BC1003_3738 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004230162.1 KEGG: bxe:Bxe_B1245 putative oxidoreductase; TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region YP_004230163.1 KEGG: bgf:BC1003_3740 precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH YP_004230164.1 KEGG: bgf:BC1003_3741 precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004230165.1 TIGRFAM: precorrin-3B C17-methyltransferase; KEGG: bxe:Bxe_B1242 precorrin-3 methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Cobalamin synthesis G-like; Cobalamin biosynthesis central region YP_004230166.1 PFAM: SMC domain protein; KEGG: bgf:BC1003_3743 SMC domain-containing protein YP_004230167.1 PFAM: metallophosphoesterase; KEGG: bpy:Bphyt_5377 metallophosphoesterase YP_004230168.1 PFAM: protein of unknown function DUF445; KEGG: bgf:BC1003_3745 hypothetical protein YP_004230169.1 PFAM: protein of unknown function UPF0118; KEGG: bgf:BC1003_3746 hypothetical protein YP_004230170.1 PFAM: monooxygenase FAD-binding; KEGG: bpy:Bphyt_5380 FAD-dependent oxidoreductase YP_004230171.1 KEGG: bxe:Bxe_B1225 hypothetical protein YP_004230172.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bgf:BC1003_3747 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004230173.1 PFAM: class II aldolase/adducin family protein; KEGG: bgf:BC1003_3748 class II aldolase/adducin family protein YP_004230174.1 KEGG: bgf:BC1003_3749 aspartate transaminase; PFAM: aminotransferase class I and II YP_004230175.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_3750 LysR family transcriptional regulator YP_004230176.1 manually curated; PFAM: regulatory protein LuxR; KEGG: bxe:Bxe_B1220 LuxR family transcriptional regulator; SMART: regulatory protein LuxR YP_004230177.1 KEGG: bgf:BC1003_3751 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004230178.1 KEGG: bgf:BC1003_3752 CheB methylesterase; PFAM: CheB methylesterase YP_004230179.1 KEGG: bgf:BC1003_3753 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_004230180.1 KEGG: bgf:BC1003_3754 multi-sensor hybrid histidine kinase; PFAM: CHASE3 domain protein; ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein YP_004230181.1 KEGG: bgf:BC1003_3755 alpha,alpha-trehalase; PFAM: glycoside hydrolase family 37 YP_004230182.1 PFAM: MltA-interacting MipA family protein; KEGG: bgf:BC1003_3756 MltA-interacting MipA family protein YP_004230183.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bgf:BC1003_3757 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_004230184.1 KEGG: bgf:BC1003_3758 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004230185.1 TIGRFAM: 1-aminocyclopropane-1-carboxylate deaminase; KEGG: bgf:BC1003_3759 1-aminocyclopropane-1-carboxylate deaminase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004230186.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_3760 LysR family transcriptional regulator YP_004230187.1 PFAM: Pirin domain protein; KEGG: bgf:BC1003_3761 pirin domain-containing protein YP_004230188.1 KEGG: bgf:BC1003_3762 alkyl hydroperoxide reductase subunit F; TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004230189.1 KEGG: bgf:BC1003_3763 peroxiredoxin; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_004230190.1 TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain-containing protein; helix-turn-helix Fis-type; KEGG: bgf:BC1003_3764 proprionate catabolism activator, fis family; SMART: AAA ATPase; PAS domain containing protein YP_004230191.1 PFAM: isocitrate lyase and phosphorylmutase; KEGG: bxe:Bxe_B1203 2,3-dimethylmalate lyase YP_004230192.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_3767 major facilitator superfamily protein YP_004230193.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_3768 GCN5-related N-acetyltransferase YP_004230194.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bgf:BC1003_3769 procollagen-proline dioxygenase; SMART: Prolyl 4-hydroxylase alpha subunit YP_004230195.1 PFAM: protein of unknown function DUF1486; KEGG: bgf:BC1003_3770 hypothetical protein YP_004230196.1 KEGG: bgf:BC1003_3771 nicotinamide phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_004230197.1 KEGG: bgf:BC1003_3772 hypothetical protein YP_004230198.1 KEGG: bgf:BC1003_3773 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004230199.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bgf:BC1003_3774 mechanosensitive ion channel protein MscS YP_004230200.1 SMART: helicase c2; KEGG: bgf:BC1003_3775 helicase C2 YP_004230201.1 PFAM: VRR-NUC domain-containing protein; KEGG: bgf:BC1003_3776 VRR-NUC domain-containing protein YP_004230202.1 PFAM: protein of unknown function DUF162; KEGG: bxe:Bxe_B1178 hypothetical protein YP_004230203.1 PFAM: protein of unknown function DUF162; KEGG: bgf:BC1003_3778 hypothetical protein YP_004230204.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bgf:BC1003_3779 hypothetical protein YP_004230205.1 KEGG: bgf:BC1003_3780 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR domain protein YP_004230206.1 PFAM: aminotransferase class I and II; KEGG: bgf:BC1003_3781 class I/II aminotransferase YP_004230207.1 KEGG: bgf:BC1003_3782 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor; sigma-54 factor core-binding region YP_004230208.1 KEGG: bgf:BC1003_3783 transport-associated protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004230209.1 PFAM: Protein of unknown function DUF2383; KEGG: bgf:BC1003_3784 hypothetical protein YP_004230210.1 KEGG: bgf:BC1003_3785 hypothetical protein YP_004230211.1 KEGG: bgf:BC1003_3786 hypothetical protein YP_004230212.1 PFAM: protein of unknown function DUF1488; KEGG: bgf:BC1003_3787 hypothetical protein YP_004230213.1 KEGG: bgf:BC1003_3788 hypothetical protein YP_004230214.1 KEGG: bgf:BC1003_3789 intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain-containing protein YP_004230215.1 KEGG: bgf:BC1003_3790 hypothetical protein YP_004230216.1 KEGG: bgf:BC1003_3791 DNA topoisomerase; PFAM: DNA topoisomerase I catalytic core domain protein YP_004230217.1 KEGG: bge:BC1002_4026 hypothetical protein YP_004230218.1 PFAM: PRC-barrel domain protein; KEGG: bgf:BC1003_3792 PRC-barrel domain-containing protein YP_004230219.1 PFAM: Protein of unknown function DUF3175; KEGG: bgf:BC1003_3793 hypothetical protein YP_004230220.1 PFAM: sodium/hydrogen exchanger; KEGG: bgf:BC1003_3794 sodium/hydrogen exchanger YP_004230221.1 KEGG: bgf:BC1003_3795 hypothetical protein YP_004230222.1 KEGG: bgf:BC1003_3796 AraC family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004230223.1 KEGG: bxe:Bxe_B1155 alkylhydroperoxidase AhpD core; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004230224.1 PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_5452 aldo/keto reductase YP_004230225.1 KEGG: bgf:BC1003_3798 DEAD/H associated domain-containing protein; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004230226.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-4 domain protein; GGDEF domain containing protein; KEGG: bgf:BC1003_3799 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_004230227.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_3800 enoyl-CoA hydratase/isomerase YP_004230228.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: bpy:Bphyt_5456 hypothetical protein YP_004230229.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bgf:BC1003_3832 peptidase M20 YP_004230230.1 KEGG: bgf:BC1003_3833 hypothetical protein YP_004230231.1 PFAM: Protein of unknown function DUF2158; KEGG: bgf:BC1003_3834 hypothetical protein YP_004230232.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_3835 major facilitator superfamily protein YP_004230233.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B1146 TetR family transcriptional regulator YP_004230234.1 KEGG: bgf:BC1003_5616 hypothetical protein YP_004230235.1 TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: bpy:Bphyt_5465 OsmC family protein; PFAM: OsmC family protein YP_004230236.1 KEGG: gdj:Gdia_3011 hypothetical protein YP_004230237.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bgf:BC1003_5614 carboxymuconolactone decarboxylase YP_004230238.1 PFAM: aminotransferase class-III; KEGG: bgf:BC1003_5613 aminotransferase class-III YP_004230239.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bpy:Bphyt_5469 transcriptional regulator, RpiR family YP_004230240.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bgf:BC1003_5610 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein YP_004230241.1 KEGG: bgf:BC1003_5609 hypothetical protein YP_004230242.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: bgf:BC1003_5608 amylo-alpha-16-glucosidase YP_004230243.1 KEGG: bgf:BC1003_5607 hypothetical protein YP_004230244.1 KEGG: bgf:BC1003_5606 cell shape determining protein, MreB/Mrl family; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_004230245.1 KEGG: bgf:BC1003_5604 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004230246.1 TIGRFAM: Glutaminase, core; KEGG: bgf:BC1003_5603 glutaminase, core; PFAM: Glutaminase, core YP_004230247.1 KEGG: bgf:BC1003_5601 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II YP_004230248.1 KEGG: bgf:BC1003_5600 hypothetical protein YP_004230249.1 KEGG: bgf:BC1003_5599 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004230250.1 KEGG: bgf:BC1003_5597 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004230251.1 PFAM: polysaccharide biosynthesis protein; KEGG: bgf:BC1003_5596 polysaccharide biosynthesis protein YP_004230252.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_5595 glycosyl transferase family 2 YP_004230253.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bge:BC1002_5739 transcriptional regulator, LysR family YP_004230254.1 KEGG: bge:BC1002_5741 major facilitator superfamily MFS_1 YP_004230255.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bge:BC1002_5742 glucose-methanol-choline oxidoreductase YP_004230256.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bge:BC1002_5743 enoyl-CoA hydratase/isomerase YP_004230257.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bge:BC1002_5744 AMP-dependent synthetase and ligase YP_004230258.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: bge:BC1002_5745 (2Fe-2S)-binding domain protein YP_004230259.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bge:BC1002_5746 molybdopterin dehydrogenase FAD-binding protein YP_004230260.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; carbon monoxide dehydrogenase subunit G; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bge:BC1002_5747 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein YP_004230261.1 KEGG: bge:BC1002_5748 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_004230262.1 KEGG: bge:BC1002_5749 UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_004230263.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bge:BC1002_5750 transcriptional regulator, LysR family YP_004230264.1 KEGG: bgf:BC1003_4993 acetylornithine deacetylase (ArgE); TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein YP_004230265.1 PFAM: protein of unknown function DUF1028; KEGG: bgf:BC1003_4992 hypothetical protein YP_004230266.1 PFAM: Endoribonuclease L-PSP; KEGG: bgf:BC1003_4991 endoribonuclease L-PSP YP_004230267.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bgf:BC1003_4990 FAD dependent oxidoreductase YP_004230268.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4989 LysR family transcriptional regulator YP_004230269.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bgf:BC1003_4988 Rieske (2Fe-2S) iron-sulfur domain-containing protein YP_004230270.1 KEGG: bgf:BC1003_4987 spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004230271.1 KEGG: bgf:BC1003_4986 ABC spermidine/putrescine transporter periplasmic ligand-binding protein YP_004230272.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4985 binding-protein-dependent transport systems inner membrane component YP_004230273.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4984 binding-protein-dependent transport systems inner membrane component YP_004230274.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5122 transcriptional regulator, LysR family YP_004230275.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bpy:Bphyt_5121 hypothetical protein YP_004230276.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_5120 major facilitator superfamily MFS_1 YP_004230277.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bgf:BC1003_5783 periplasmic-binding protein/LacI transcriptional regulator YP_004230278.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_3848 major facilitator superfamily protein YP_004230279.1 KEGG: bgf:BC1003_3849 hypothetical protein YP_004230280.1 KEGG: bgf:BC1003_3850 putative secreted protein YP_004230281.1 KEGG: bgf:BC1003_3851 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_004230282.1 KEGG: bgf:BC1003_3852 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004230283.1 KEGG: bvi:Bcep1808_4762 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004230284.1 KEGG: bvi:Bcep1808_4761 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004230285.1 KEGG: bch:Bcen2424_5963 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004230286.1 KEGG: bvi:Bcep1808_4759 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004230287.1 KEGG: bch:Bcen2424_5965 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004230288.1 PFAM: transcriptional regulator PadR family protein; KEGG: bgf:BC1003_5581 PadR-like family transcriptional regulator YP_004230289.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: bgf:BC1003_5580 FAD-binding 9 siderophore-interacting domain-containing protein YP_004230290.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5579 major facilitator superfamily protein YP_004230291.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_5578 enoyl-CoA hydratase/isomerase YP_004230292.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_5577 enoyl-CoA hydratase/isomerase YP_004230293.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; KEGG: bgf:BC1003_5576 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004230294.1 KEGG: bgf:BC1003_5575 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004230295.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_5574 AMP-dependent synthetase and ligase YP_004230296.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_5573 acyl-CoA dehydrogenase domain-containing protein YP_004230297.1 KEGG: bpy:Bphyt_6809 porin gram-negative type YP_004230298.1 KEGG: bpy:Bphyt_6811 salicylate esterase YP_004230299.1 KEGG: bpy:Bphyt_1472 aminocarboxymuconate-semialdehyde decarboxylase; PFAM: amidohydrolase 2 YP_004230300.1 TIGRFAM: 3-hydroxyanthranilate 3,4-dioxygenase; KEGG: bpy:Bphyt_1471 3-hydroxyanthranilate 3,4-dioxygenase; PFAM: 3-hydroxyanthranilic acid dioxygenase YP_004230301.1 PFAM: Endoribonuclease L-PSP; KEGG: bpy:Bphyt_1470 endoribonuclease L-PSP YP_004230302.1 KEGG: bpy:Bphyt_1469 4-oxalocrotonate decarboxylase YP_004230303.1 PFAM: DmpG communication domain protein; Semialdehyde dehydrogenase NAD - binding; KEGG: bge:BC1002_4721 acetaldehyde dehydrogenase (acetylating); SMART: Semialdehyde dehydrogenase NAD - binding YP_004230304.1 KEGG: bpy:Bphyt_1466 4-oxalocrotonate decarboxylase YP_004230305.1 KEGG: bpy:Bphyt_1465 2-hydroxymuconic semialdehyde dehydrogenase; TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004230306.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_6812 transcriptional regulator, LysR family YP_004230307.1 KEGG: bgf:BC1003_5572 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004230308.1 PFAM: protein of unknown function DUF107; KEGG: bgf:BC1003_5571 hypothetical protein YP_004230309.1 KEGG: bgf:BC1003_5570 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein YP_004230310.1 KEGG: bgf:BC1003_5569 hypothetical protein YP_004230311.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: bgf:BC1003_5568 xanthine/uracil/vitamin C permease YP_004230312.1 PFAM: protein of unknown function DUF1488; KEGG: bxe:Bxe_B1076 hypothetical protein YP_004230313.1 KEGG: bgf:BC1003_5566 GAF modulated sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004230314.1 PFAM: ferredoxin; KEGG: bgf:BC1003_5565 ferredoxin YP_004230315.1 PFAM: protein of unknown function DUF1653; KEGG: bgf:BC1003_5564 hypothetical protein YP_004230316.1 PFAM: YheO-like domain-containing protein; KEGG: bgf:BC1003_5563 YheO-like domain-containing protein YP_004230317.1 KEGG: bgf:BC1003_5562 hypothetical protein YP_004230318.1 KEGG: bgf:BC1003_5561 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_004230319.1 KEGG: bgf:BC1003_5560 response regulator receiver and ANTAR domain-containing protein; PFAM: ANTAR domain protein; response regulator receiver; SMART: response regulator receiver YP_004230320.1 KEGG: bgf:BC1003_5559 ABC nitrate transporter periplasmic ligand-binding protein YP_004230321.1 KEGG: bgf:BC1003_5558 integral membrane sensor signal transduction histidine kinase; PFAM: Two-component sensor kinase domain-containing protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004230322.1 KEGG: bgf:BC1003_5557 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004230323.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_5556 extracellular solute-binding protein family 1 YP_004230324.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_5555 binding-protein-dependent transport systems inner membrane component YP_004230325.1 KEGG: bxe:Bxe_B1042 ABC spermidine/putrescine transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004230326.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_5553 porin gram-negative type YP_004230327.1 TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: bgf:BC1003_5552 rhamnose ABC transporter periplasmic rhamnose-binding protein YP_004230328.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_5551 inner-membrane translocator YP_004230329.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_5550 inner-membrane translocator YP_004230330.1 KEGG: bpy:Bphyt_5684 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004230331.1 PFAM: amidohydrolase 2; KEGG: bgf:BC1003_5548 amidohydrolase 2 YP_004230332.1 PFAM: protein of unknown function DUF718; KEGG: bgf:BC1003_5547 hypothetical protein YP_004230333.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5546 LysR family transcriptional regulator YP_004230334.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5545 short-chain dehydrogenase/reductase SDR YP_004230335.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bgf:BC1003_5544 mandelate racemase/muconate lactonizing protein YP_004230336.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5543 major facilitator superfamily protein YP_004230337.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1028 putative 3-oxoacyl-(acyl-carrier protein) reductase YP_004230338.1 KEGG: bgf:BC1003_5520 hypothetical protein YP_004230339.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcj:BCAS0361 LysR family regulatory protein YP_004230340.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bph:Bphy_6020 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004230341.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bac:BamMC406_6244 glyoxalase/bleomycin resistance protein/dioxygenase YP_004230342.1 PFAM: MaoC domain protein dehydratase; KEGG: bgf:BC1003_2110 MaoC domain-containing protein dehydratase YP_004230343.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bch:Bcen2424_5895 formyl-CoA transferase YP_004230344.1 KEGG: bac:BamMC406_6247 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_004230345.1 KEGG: bgf:BC1003_5518 hypothetical protein YP_004230346.1 KEGG: bgf:BC1003_5517 hypothetical protein YP_004230347.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bgf:BC1003_5516 hypothetical protein YP_004230348.1 KEGG: bgf:BC1003_5515 protein-tyrosine phosphatase, low molecular weight; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004230349.1 KEGG: bgf:BC1003_5514 heat shock protein DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004230350.1 PFAM: NADPH-dependent FMN reductase; KEGG: bxe:Bxe_B1014 NADPH-dependent FMN reductase family protein YP_004230351.1 KEGG: bxe:Bxe_B1013 hypothetical protein YP_004230352.1 PFAM: Amidase; KEGG: bgf:BC1003_5510 amidase YP_004230353.1 KEGG: bgf:BC1003_5509 CDP-diacylglycerol diphosphatase; PFAM: CDP-diacylglycerol pyrophosphatase YP_004230354.1 KEGG: bgf:BC1003_5508 hypothetical protein YP_004230355.1 KEGG: bch:Bcen2424_5349 hypothetical protein YP_004230356.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bpy:Bphyt_1024 type I phosphodiesterase/nucleotide pyrophosphatase YP_004230357.1 KEGG: bpr:GBP346_A4235 outer membrane porin lipoprotein YP_004230358.1 KEGG: bte:BTH_I0039 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004230359.1 KEGG: bte:BTH_I0038 sensor histidine kinase; PFAM: Two-component sensor kinase domain-containing protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004230360.1 KEGG: bph:Bphy_5863 hypothetical protein YP_004230361.1 KEGG: nde:NIDE1481 hypothetical protein YP_004230362.1 KEGG: bpy:Bphyt_6062 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004230363.1 PFAM: small multidrug resistance protein; KEGG: bmj:BMULJ_04880 hypothetical protein YP_004230364.1 PFAM: UbiA prenyltransferase; KEGG: bgf:BC1003_1765 UbiA prenyltransferase YP_004230365.1 KEGG: bgf:BC1003_2049 hypothetical protein YP_004230366.1 PFAM: fatty acid desaturase; KEGG: bgf:BC1003_5507 fatty acid desaturase YP_004230367.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5503 short-chain dehydrogenase/reductase SDR YP_004230368.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5502 LysR family transcriptional regulator YP_004230369.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5501 LysR family transcriptional regulator YP_004230370.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_5500 extracellular solute-binding protein family 1 YP_004230371.1 KEGG: bgf:BC1003_5499 ABC transporter-like protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004230372.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_5498 binding-protein-dependent transport systems inner membrane component YP_004230373.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_5497 binding-protein-dependent transport systems inner membrane component YP_004230374.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_5496 FAD dependent oxidoreductase YP_004230375.1 KEGG: bxe:Bxe_B2707 hypothetical protein YP_004230376.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bpy:Bphyt_1891 BFD domain protein (2Fe-2S)-binding domain protein YP_004230377.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_5493 FAD dependent oxidoreductase YP_004230378.1 PFAM: Endoribonuclease L-PSP; KEGG: bgf:BC1003_5492 endoribonuclease L-PSP YP_004230379.1 PFAM: MgtC/SapB transporter; KEGG: bpy:Bphyt_4802 MgtC/SapB transporter YP_004230380.1 KEGG: bgf:BC1003_5491 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004230381.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5490 LysR family transcriptional regulator YP_004230382.1 KEGG: bgf:BC1003_5489 NAD-dependent epimerase/dehydratase YP_004230383.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bgf:BC1003_5488 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004230384.1 KEGG: bgf:BC1003_5487 hypothetical protein YP_004230385.1 PFAM: Tannase and feruloyl esterase; KEGG: bgf:BC1003_5486 tannase and feruloyl esterase YP_004230386.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_5485 porin gram-negative type YP_004230387.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5484 major facilitator superfamily protein YP_004230388.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_5483 enoyl-CoA hydratase/isomerase YP_004230389.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_5482 aldehyde dehydrogenase YP_004230390.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_5481 AMP-dependent synthetase and ligase YP_004230391.1 PFAM: isochorismatase hydrolase; KEGG: bgf:BC1003_5480 isochorismatase hydrolase YP_004230392.1 PFAM: acyltransferase 3; KEGG: bgf:BC1003_5478 acyltransferase 3 YP_004230393.1 KEGG: bgf:BC1003_5477 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_004230394.1 KEGG: bgf:BC1003_5476 hypothetical protein YP_004230395.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_5475 glycosyl transferase family 2 YP_004230396.1 PFAM: acyltransferase 3; KEGG: bgf:BC1003_5474 acyltransferase 3 YP_004230397.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_5473 alpha/beta hydrolase fold protein YP_004230398.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5472 LysR family transcriptional regulator YP_004230399.1 PFAM: ATP adenylyltransferase-like; KEGG: bgf:BC1003_5471 ATP adenylyltransferase-like protein YP_004230400.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_2070 FAD dependent oxidoreductase YP_004230401.1 KEGG: bpy:Bphyt_2071 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004230402.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bpy:Bphyt_2072 ornithine cyclodeaminase/mu-crystallin YP_004230403.1 PFAM: YheO-like domain-containing protein; KEGG: bpy:Bphyt_2073 YheO domain protein YP_004230404.1 SMART: von Willebrand factor type A; KEGG: bgf:BC1003_5470 putative MxaL-like protein YP_004230405.1 KEGG: bgf:BC1003_5469 putative MxaK-like protein YP_004230406.1 KEGG: bgf:BC1003_5468 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_004230407.1 KEGG: bgf:BC1003_5467 hypothetical protein YP_004230408.1 SMART: von Willebrand factor type A; KEGG: bgf:BC1003_5466 putative MxaS-like protein YP_004230409.1 KEGG: bgf:BC1003_5465 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase YP_004230410.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5464 LysR family transcriptional regulator YP_004230411.1 KEGG: bgf:BC1003_5463 hypothetical protein YP_004230412.1 KEGG: bgf:BC1003_5462 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004230413.1 KEGG: bgf:BC1003_5461 putative methanol dehydrogenase-like protein, cytochrome cL (XoxG) YP_004230414.1 KEGG: bgf:BC1003_5460 PQQ-dependent dehydrogenase, methanol/ethanol family; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein YP_004230415.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: bgf:BC1003_5459 transcriptional coactivator/pterin dehydratase YP_004230416.1 TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; KEGG: bgf:BC1003_5458 beta-ribofuranosylaminobenzene 5'-phosphate synthase family YP_004230417.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: bgf:BC1003_5457 methylene-tetrahydromethanopterin dehydrogenase YP_004230418.1 PFAM: protein of unknown function DUF201; KEGG: bgf:BC1003_5456 hypothetical protein YP_004230419.1 TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; KEGG: bgf:BC1003_5455 methenyltetrahydromethanopterin cyclohydrolase; PFAM: Methenyltetrahydromethanopterin cyclohydrolase YP_004230420.1 KEGG: bgf:BC1003_5454 alpha-L-glutamate ligase, RimK family; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp YP_004230421.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: bgf:BC1003_5453 triphosphoribosyl-dephospho-CoA protein YP_004230422.1 KEGG: bgf:BC1003_5452 formaldehyde-activating enzyme; TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae) YP_004230423.1 KEGG: bgf:BC1003_5451 hypothetical protein YP_004230424.1 KEGG: bgf:BC1003_5450 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; SMART: dihydroneopterin aldolase YP_004230425.1 KEGG: bgf:BC1003_5449 GAF modulated sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004230426.1 PFAM: flavoprotein; KEGG: bgf:BC1003_5448 flavoprotein YP_004230427.1 KEGG: bgf:BC1003_5447 dihydropteroate synthase DhpS YP_004230428.1 TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: bgf:BC1003_5445 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II YP_004230429.1 TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: bgf:BC1003_5444 transketolase; SMART: Transketolase central region YP_004230430.1 KEGG: bgf:BC1003_5443 phosphoribulokinase YP_004230431.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: bgf:BC1003_5442 inositol phosphatase/fructose-16-bisphosphatase YP_004230432.1 TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; KEGG: bgf:BC1003_5441 CbbX protein; SMART: AAA ATPase YP_004230433.1 KEGG: bgf:BC1003_5440 ribulose-bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase small chain YP_004230434.1 KEGG: bgf:BC1003_5439 ribulose-bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like YP_004230435.1 manually curated; TIGRFAM: coenzyme PQQ biosynthesis protein A; KEGG: bgf:BC1003_5438 coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A YP_004230436.1 PFAM: protein of unknown function DUF447; KEGG: bgf:BC1003_5437 hypothetical protein YP_004230437.1 PFAM: protein of unknown function DUF556; KEGG: bgf:BC1003_5436 hypothetical protein YP_004230438.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: bgf:BC1003_5435 aspartate/glutamate/uridylate kinase YP_004230439.1 KEGG: bgf:BC1003_5434 H4MPT-linked C1 transfer pathway protein; TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase YP_004230440.1 PFAM: protein of unknown function DUF201; KEGG: bgf:BC1003_5433 hypothetical protein YP_004230441.1 PFAM: histidine biosynthesis protein; KEGG: bgf:BC1003_5432 histidine biosynthesis protein YP_004230442.1 KEGG: bgf:BC1003_5431 formylmethanofuran dehydrogenase subunit B YP_004230443.1 KEGG: bgf:BC1003_5430 formylmethanofuran dehydrogenase subunit A; TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3 YP_004230444.1 TIGRFAM: formylmethanofuran/tetrahydromethanopterin N-formyltransferase; KEGG: bgf:BC1003_5429 formylmethanofuran/tetrahydromethanopterin N-formyltransferase; PFAM: formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr) YP_004230445.1 TIGRFAM: formylmethanofuran dehydrogenase subunit C; KEGG: bgf:BC1003_5428 formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein YP_004230446.1 PFAM: Cytochrome b/b6 domain; KEGG: bgf:BC1003_5427 putative cytochrome b561 YP_004230447.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_5426 alpha/beta hydrolase fold protein YP_004230448.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: bgf:BC1003_5425 coenzyme PQQ biosynthesis protein B YP_004230449.1 TIGRFAM: coenzyme PQQ biosynthesis protein C; KEGG: bgf:BC1003_5424 coenzyme PQQ biosynthesis protein C; PFAM: TENA/THI-4 domain-containing protein YP_004230450.1 KEGG: bgf:BC1003_5423 pyrroloquinoline quinone synthesis D YP_004230451.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: bgf:BC1003_5422 coenzyme PQQ biosynthesis protein E; SMART: Elongator protein 3/MiaB/NifB YP_004230452.1 KEGG: bxe:Bxe_B2471 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004230453.1 KEGG: bgf:BC1003_5420 histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004230454.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bgf:BC1003_5419 TonB-dependent receptor YP_004230455.1 SMART: WD-40 repeat-containing protein; KEGG: bgf:BC1003_5418 40-residue YVTN family beta-propeller repeat-containing protein YP_004230456.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_B2476 bipolymer transport protein MotA/TolQ/ExbB family YP_004230457.1 KEGG: bgf:BC1003_5417 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004230458.1 KEGG: bgf:BC1003_5416 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004230459.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_5415 porin gram-negative type YP_004230460.1 KEGG: bpy:Bphyt_4692 hypothetical protein YP_004230461.1 PFAM: protein of unknown function DUF1488; KEGG: bgf:BC1003_5414 hypothetical protein YP_004230462.1 KEGG: bgf:BC1003_5413 putative ABC phosphate/phosphonate transporter periplasmic ligand-binding protein YP_004230463.1 KEGG: bgf:BC1003_5412 carbamoyl-phosphate synthase L chain ATP-binding protein; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; Carbamoyl-phosphate synthetase large chain domain protein; biotin/lipoyl attachment domain-containing protein; SMART: biotin carboxylase domain protein YP_004230464.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_5411 enoyl-CoA hydratase/isomerase YP_004230465.1 KEGG: bgf:BC1003_5410 methylcrotonoyl-CoA carboxylase; PFAM: carboxyl transferase YP_004230466.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_5409 acyl-CoA dehydrogenase domain-containing protein YP_004230467.1 PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YsiA domain-containing protein; KEGG: bgf:BC1003_5408 regulatory protein TetR YP_004230469.1 KEGG: dol:Dole_0583 hypothetical protein YP_004230470.1 KEGG: bpy:Bphyt_6372 hypothetical protein YP_004230471.1 PFAM: Cl- channel voltage-gated family protein; KEGG: afr:AFE_0815 voltage-gated chloride channel YP_004230472.1 KEGG: bph:Bphy_5023 MarR family transcriptional regulator YP_004230473.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: bpy:Bphyt_2032 thiamine pyrophosphate protein YP_004230474.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bgf:BC1003_0616 mandelate racemase/muconate lactonizing protein YP_004230475.1 KEGG: bgf:BC1003_0615 hypothetical protein YP_004230476.1 KEGG: bgf:BC1003_0614 hypothetical protein YP_004230477.1 PFAM: glucose-methanol-choline oxidoreductase; Lycopene beta and epsilon cyclase; GMC oxidoreductase; KEGG: bgf:BC1003_0613 glucose-methanol-choline oxidoreductase YP_004230478.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_6383 short-chain dehydrogenase/reductase SDR YP_004230479.1 PFAM: glycoside hydrolase 15-related; KEGG: bgf:BC1003_0611 glycoside hydrolase 15-related protein YP_004230480.1 KEGG: bgf:BC1003_5143 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004230481.1 KEGG: bgf:BC1003_5142 hypothetical protein YP_004230482.1 KEGG: bgf:BC1003_5141 cytochrome c oxidase subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit III YP_004230483.1 KEGG: bgf:BC1003_5140 cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I YP_004230484.1 KEGG: bph:Bphy_6972 integral membrane protein YP_004230485.1 PFAM: Paraquat-inducible protein A; KEGG: bge:BC1002_4341 paraquat-inducible protein A YP_004230486.1 PFAM: Mammalian cell entry related domain protein; KEGG: bge:BC1002_4342 mammalian cell entry related domain protein YP_004230487.1 PFAM: protein of unknown function DUF330; KEGG: bge:BC1002_4343 protein of unknown function DUF330 YP_004230488.1 KEGG: pvi:Cvib_0435 hypothetical protein YP_004230489.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold domain protein; GGDEF domain containing protein; KEGG: bvi:Bcep1808_5745 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004230490.1 KEGG: bph:Bphy_4475 hypothetical protein YP_004230491.1 KEGG: rsl:RPSI07_2289 putative glycosyl hydrolase, BNR repeat YP_004230492.1 PFAM: thiamineS protein; KEGG: rso:RS04773 hypothetical protein YP_004230493.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_1619 short-chain dehydrogenase/reductase SDR YP_004230494.1 KEGG: ang:An02g07410 hypothetical protein YP_004230495.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_6689 LysR family transcriptional regulator YP_004230496.1 PFAM: Methyltransferase type 11; KEGG: mlo:mlr6936 sarcosine-dimethylglycine methyltransferase YP_004230497.1 KEGG: bph:Bphy_6690 hypothetical protein YP_004230498.1 KEGG: bph:Bphy_4196 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004230499.1 PFAM: nitroreductase; KEGG: bph:Bphy_6984 nitroreductase YP_004230500.1 PFAM: porin Gram-negative type; KEGG: bph:Bphy_6973 porin YP_004230501.1 KEGG: bph:Bphy_6975 hypothetical protein YP_004230502.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bph:Bphy_6979 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004230503.1 PFAM: ferredoxin; KEGG: bph:Bphy_6980 ferredoxin YP_004230504.1 KEGG: bph:Bphy_6981 glutamine synthetase catalytic region; PFAM: glutamine synthetase catalytic region YP_004230505.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bph:Bphy_6982 phthalate 4,5-dioxygenase YP_004230506.1 KEGG: bph:Bphy_6983 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH YP_004230507.1 KEGG: reu:Reut_C6136 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004230508.1 KEGG: reu:Reut_C6135 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004230509.1 PFAM: nitroreductase; KEGG: mno:Mnod_8469 nitroreductase YP_004230510.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mno:Mnod_8471 transcriptional regulator, LysR family YP_004230511.1 PFAM: protein of unknown function DUF72; KEGG: bgf:BC1003_5407 hypothetical protein YP_004230512.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bgf:BC1003_5377 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004230513.1 KEGG: bgf:BC1003_5376 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004230514.1 KEGG: bgf:BC1003_5375 hypothetical protein YP_004230515.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bgf:BC1003_5374 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_004230516.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bgf:BC1003_5373 hypothetical protein YP_004230517.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5372 LysR family transcriptional regulator YP_004230518.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5371 major facilitator superfamily protein YP_004230519.1 KEGG: bgf:BC1003_5370 hypothetical protein; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004230520.1 PFAM: LysR substrate-binding; KEGG: bgf:BC1003_5369 LysR family transcriptional regulator YP_004230521.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bgf:BC1003_5368 cupin 2 conserved barrel domain-containing protein YP_004230522.1 KEGG: bgf:BC1003_5367 zinc-binding alcohol dehydrogenase family protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein YP_004230523.1 KEGG: bgf:BC1003_5366 hypothetical protein YP_004230524.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bgf:BC1003_5365 sulfate transporter YP_004230525.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_5364 regulatory protein TetR YP_004230526.1 KEGG: bgf:BC1003_5363 hypothetical protein YP_004230527.1 PFAM: OmpW family protein; KEGG: bgf:BC1003_5358 OmpW family protein YP_004230528.1 KEGG: bgf:BC1003_5357 hypothetical protein YP_004230529.1 PFAM: Protein of unknown function DUF2891; KEGG: bgf:BC1003_5356 hypothetical protein YP_004230530.1 PFAM: PRC-barrel domain protein; KEGG: bgf:BC1003_5355 PRC-barrel domain-containing protein YP_004230531.1 KEGG: bgf:BC1003_5354 DNA polymerase B region; PFAM: DNA polymerase B exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B YP_004230532.1 PFAM: phosphoesterase; KEGG: bgf:BC1003_5353 phosphoesterase YP_004230533.1 KEGG: bgf:BC1003_5346 hypothetical protein YP_004230534.1 KEGG: bgf:BC1003_5345 hypothetical protein YP_004230535.1 KEGG: bgf:BC1003_5342 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004230536.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bgf:BC1003_5341 activator of HSP90 ATPase 1 family protein YP_004230537.1 PFAM: Domain of unknown function DUF1801; KEGG: bgf:BC1003_5340 hypothetical protein YP_004230538.1 KEGG: bgf:BC1003_5339 glycosyl transferase family 9; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004230539.1 PFAM: Protein of unknown function DUF2946; KEGG: bgf:BC1003_5338 hypothetical protein YP_004230540.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bgf:BC1003_5337 TonB-dependent receptor YP_004230541.1 KEGG: bgf:BC1003_5336 propeptide PepSY amd peptidase M4 YP_004230542.1 PFAM: Uncharacterised conserved protein UCP019302; KEGG: bgf:BC1003_5335 hypothetical protein YP_004230543.1 PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; KEGG: bgf:BC1003_5334 SMP-30/gluconolaconase/LRE-like region-containing protein YP_004230544.1 PFAM: DSBA oxidoreductase; KEGG: bgf:BC1003_5333 DsbA oxidoreductase YP_004230545.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5332 short-chain dehydrogenase/reductase SDR YP_004230546.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: bgf:BC1003_5331 thiamine pyrophosphate TPP-binding domain-containing protein YP_004230547.1 KEGG: bpy:Bphyt_6387 hypothetical protein YP_004230548.1 KEGG: bge:BC1002_2319 hypothetical protein YP_004230549.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: bpy:Bphyt_6389 glucose-methanol-choline oxidoreductase YP_004230550.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_5330 glutathione S-transferase domain-containing protein YP_004230551.1 KEGG: bgf:BC1003_5328 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004230552.1 KEGG: bgf:BC1003_5327 cyclic nucleotide-binding protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004230553.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_5326 OmpA/MotB domain-containing protein YP_004230554.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bgf:BC1003_5325 MotA/TolQ/ExbB proton channel YP_004230555.1 KEGG: bgf:BC1003_5324 putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004230556.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_4588 binding-protein-dependent transport systems inner membrane component YP_004230557.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_4587 binding-protein-dependent transport systems inner membrane component YP_004230558.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_5321 extracellular solute-binding protein family 1 YP_004230559.1 KEGG: bpy:Bphyt_4585 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein YP_004230560.1 KEGG: bgf:BC1003_5319 ABC transporter-like protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004230561.1 KEGG: bgf:BC1003_5318 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004230562.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_4581 monosaccharide-transporting ATPase YP_004230563.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_5316 inner-membrane translocator YP_004230564.1 KEGG: bgf:BC1003_5315 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004230565.1 PFAM: ROK family protein; KEGG: bgf:BC1003_5314 ROK family protein YP_004230566.1 PFAM: glycosyl transferase family 51; KEGG: bgf:BC1003_5313 hypothetical protein YP_004230567.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5312 LysR family transcriptional regulator YP_004230568.1 PFAM: dihydrodipicolinate synthetase; KEGG: bgf:BC1003_5311 dihydrodipicolinate synthetase YP_004230569.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_5310 FAD dependent oxidoreductase YP_004230570.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_5309 regulatory protein TetR YP_004230571.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5308 major facilitator superfamily protein YP_004230572.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; KEGG: bgf:BC1003_5307 shikimate dehydrogenase substrate-binding domain-containing protein YP_004230573.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: bge:BC1002_4379 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_004230574.1 KEGG: bgf:BC1003_5305 4-hydroxyphenylpyruvate dioxygenase; PFAM: Xylose isomerase domain-containing protein TIM barrel; Glyoxalase/bleomycin resistance protein/dioxygenase YP_004230575.1 KEGG: bgf:BC1003_5304 hypothetical protein YP_004230576.1 KEGG: bgf:BC1003_5303 hypothetical protein YP_004230577.1 KEGG: bxe:Bxe_B0879 hypothetical protein YP_004230578.1 KEGG: bgf:BC1003_5301 AraC family transcriptional regulator; PFAM: PAS fold-4 domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; PAC repeat-containing protein YP_004230579.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bgf:BC1003_5300 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004230580.1 KEGG: bgf:BC1003_5299 ferredoxin YP_004230581.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_5298 FAD dependent oxidoreductase YP_004230582.1 KEGG: bgf:BC1003_5297 4-hydroxyproline epimerase; PFAM: proline racemase YP_004230583.1 PFAM: dihydrodipicolinate synthetase; KEGG: bpy:Bphyt_4559 dihydrodipicolinate synthetase YP_004230584.1 KEGG: bgf:BC1003_5295 winged helix family two component transcriptional regulator; PFAM: transcriptional regulator domain-containing protein; response regulator receiver; SMART: transcriptional regulator domain-containing protein; response regulator receiver YP_004230585.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5294 major facilitator superfamily protein YP_004230586.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5293 major facilitator superfamily protein YP_004230587.1 KEGG: bgf:BC1003_5292 hypothetical protein YP_004230588.1 PFAM: DoxX family protein; KEGG: bpy:Bphyt_4554 DoxX family protein YP_004230589.1 PFAM: RbsD or FucU transport; KEGG: bgf:BC1003_5290 RbsD or FucU transport YP_004230590.1 KEGG: bgf:BC1003_5289 hypothetical protein YP_004230591.1 KEGG: bgf:BC1003_5288 hypothetical protein YP_004230592.1 KEGG: bgf:BC1003_5287 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004230593.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bgf:BC1003_5286 hypothetical protein YP_004230594.1 PFAM: flagellar transcriptional activator; KEGG: bgf:BC1003_5285 flagellar transcriptional activator YP_004230595.1 PFAM: flagellar transcriptional activator FlhC; KEGG: bgf:BC1003_5284 flagellar transcriptional activator FlhC YP_004230596.1 KEGG: bgf:BC1003_5283 Mn2+/Fe2+ transporter NRAMP family; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_004230597.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_5282 acyl-CoA dehydrogenase type 2 domain-containing protein YP_004230598.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_5281 binding-protein-dependent transport systems inner membrane component YP_004230599.1 KEGG: bgf:BC1003_5280 ABC transporter-like protein; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_004230600.1 KEGG: bgf:BC1003_5279 nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; PFAM: Luciferase-like, subgroup YP_004230601.1 PFAM: NLPA lipoprotein; KEGG: bgf:BC1003_5278 NlpA lipoprotein YP_004230602.1 KEGG: bgf:BC1003_5277 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004230603.1 KEGG: bgf:BC1003_5276 transporter hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004230604.1 KEGG: bgf:BC1003_5275 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004230605.1 KEGG: bgf:BC1003_5274 putative carboxylesterase YP_004230606.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_4532 transcriptional regulator, LysR family YP_004230607.1 KEGG: bgf:BC1003_5272 hypothetical protein YP_004230608.1 PFAM: purine nucleoside permease; KEGG: bgf:BC1003_5271 purine nucleoside permease YP_004230609.1 KEGG: bgf:BC1003_5270 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004230610.1 PFAM: NAD-glutamate dehydrogenase; KEGG: bgf:BC1003_5269 NAD-glutamate dehydrogenase YP_004230611.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_5268 alpha/beta hydrolase fold protein YP_004230612.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: bgf:BC1003_5267 peptidase M14 carboxypeptidase A YP_004230613.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_5266 hypothetical protein YP_004230614.1 KEGG: bgf:BC1003_5265 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_004230615.1 KEGG: bgf:BC1003_5264 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004230616.1 KEGG: bgf:BC1003_5263 hypothetical protein YP_004230617.1 KEGG: bgf:BC1003_5262 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain-containing protein; SMART: Helix-turn-helix, AraC domain YP_004230618.1 KEGG: bpy:Bphyt_4510 choline ABC transporter, periplasmic binding protein; TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system YP_004230619.1 PFAM: protein of unknown function DUF849; KEGG: bpy:Bphyt_4509 protein of unknown function DUF849 YP_004230620.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_5259 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein YP_004230621.1 KEGG: bgf:BC1003_5258 hypothetical protein YP_004230622.1 KEGG: bgf:BC1003_5257 putative lipase (esterase) YP_004230623.1 KEGG: bgf:BC1003_5256 hypothetical protein YP_004230624.1 KEGG: bgf:BC1003_5255 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004230625.1 PFAM: response regulator receiver; KEGG: bgf:BC1003_5254 response regulator receiver protein YP_004230626.1 KEGG: bgf:BC1003_5253 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004230627.1 KEGG: bgf:BC1003_5252 hypothetical protein YP_004230628.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_5251 OmpA/MotB domain-containing protein YP_004230629.1 KEGG: bte:BTH_II1149 hypothetical protein; manually curated; PFAM: protein of unknown function DUF802 YP_004230630.1 PFAM: Protein of unknown function DUF3348; KEGG: bgf:BC1003_5249 hypothetical protein YP_004230631.1 KEGG: bgf:BC1003_5248 helix-turn-helix domain-containing protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004230632.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5247 major facilitator superfamily protein YP_004230633.1 PFAM: Amidase; KEGG: bgf:BC1003_5246 amidase YP_004230634.1 KEGG: bgf:BC1003_5245 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase YP_004230635.1 KEGG: bgf:BC1003_5244 hypothetical protein YP_004230636.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bgf:BC1003_5243 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_004230637.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5242 LysR family transcriptional regulator YP_004230638.1 PFAM: Na+/solute symporter; KEGG: bgf:BC1003_5241 Na+/solute symporter YP_004230639.1 PFAM: Protein of unknown function DUF3311; KEGG: bxe:Bxe_B0790 hypothetical protein YP_004230640.1 KEGG: bgf:BC1003_5239 integral membrane sensor signal transduction histidine kinase; PFAM: Cache type 2 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004230641.1 KEGG: bgf:BC1003_5238 LuxR family two component transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004230642.1 KEGG: bgf:BC1003_5237 transport-associated protein YP_004230643.1 KEGG: bgf:BC1003_5236 hypothetical protein YP_004230644.1 KEGG: bgf:BC1003_5235 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004230645.1 KEGG: bgf:BC1003_5234 hypothetical protein YP_004230646.1 KEGG: bgf:BC1003_5232 hypothetical protein YP_004230647.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: bgf:BC1003_5231 FKBP-type peptidylprolyl isomerase YP_004230648.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bgf:BC1003_5230 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004230649.1 KEGG: bgf:BC1003_5229 DEAD/H associated domain-containing protein; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004230650.1 PFAM: metallophosphoesterase; KEGG: bgf:BC1003_5228 metallophosphoesterase YP_004230651.1 PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: bgf:BC1003_5227 FAD linked oxidase domain-containing protein YP_004230652.1 KEGG: bgf:BC1003_5226 putative lipoprotein YP_004230653.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bgf:BC1003_5225 YbaK/prolyl-tRNA synthetase associated region YP_004230654.1 KEGG: bgf:BC1003_5224 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_004230655.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_5223 porin gram-negative type YP_004230656.1 PFAM: 20S proteasome A and B subunits; KEGG: bgf:BC1003_5222 hypothetical protein YP_004230657.1 KEGG: bgf:BC1003_5221 transglutaminase domain-containing protein; PFAM: transglutaminase domain-containing protein; transglutaminase domain protein; SMART: transglutaminase domain-containing protein YP_004230658.1 PFAM: protein of unknown function DUF403; KEGG: bgf:BC1003_5220 hypothetical protein YP_004230659.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bgf:BC1003_5219 hypothetical protein YP_004230660.1 PFAM: histone family protein DNA-binding protein; KEGG: bgf:BC1003_5218 histone family protein DNA-binding protein YP_004230661.1 KEGG: bgf:BC1003_5217 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004230662.1 KEGG: bgf:BC1003_5214 cupin 2 conserved barrel domain-containing protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004230663.1 PFAM: extracellular solute-binding protein family 5; KEGG: bgf:BC1003_5213 extracellular solute-binding protein family 5 YP_004230664.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_5212 binding-protein-dependent transport systems inner membrane component YP_004230665.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0755 ABC oligopeptide/dipeptide transporter, inner membrane subunit YP_004230666.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bgf:BC1003_5210 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase YP_004230667.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bgf:BC1003_5209 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase YP_004230668.1 PFAM: outer membrane porin; KEGG: bgf:BC1003_5208 outer membrane porin YP_004230669.1 KEGG: bgf:BC1003_5207 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004230670.1 KEGG: bgf:BC1003_5206 ABC transporter-like protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004230671.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_5205 binding-protein-dependent transport systems inner membrane component YP_004230672.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_5204 binding-protein-dependent transport systems inner membrane component YP_004230673.1 KEGG: bgf:BC1003_5203 hypothetical protein YP_004230674.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bgf:BC1003_5202 BFD domain-containing protein (2Fe-2S)-binding domain-containing protein YP_004230675.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_5201 FAD dependent oxidoreductase YP_004230676.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_5200 extracellular solute-binding protein family 1 YP_004230677.1 KEGG: bgf:BC1003_5199 hypothetical protein YP_004230678.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bgf:BC1003_5198 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004230679.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: bgf:BC1003_5197 inosine/uridine-preferring nucleoside hydrolase YP_004230680.1 KEGG: bpy:Bphyt_4421 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding YP_004230681.1 KEGG: bgf:BC1003_5195 nucleoside transporter; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein YP_004230682.1 KEGG: bgf:BC1003_5194 hypothetical protein YP_004230683.1 KEGG: bph:Bphy_7444 hypothetical protein YP_004230684.1 KEGG: bgf:BC1003_5193 LuxR family two component transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004230685.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bgf:BC1003_5192 multi-sensor signal transduction histidine kinase; SMART: response regulator receiver; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004230686.1 KEGG: bgf:BC1003_5191 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004230687.1 KEGG: bgf:BC1003_5190 hypothetical protein YP_004230688.1 KEGG: bgf:BC1003_5189 hypothetical protein YP_004230689.1 KEGG: bgf:BC1003_5188 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004230690.1 PFAM: UspA domain-containing protein; KEGG: bgf:BC1003_5187 UspA domain-containing protein YP_004230691.1 PFAM: Domain of unknown function DUF1840; KEGG: bge:BC1002_4517 domain of unknown function DUF1840 YP_004230692.1 KEGG: bgf:BC1003_5186 CBS domain containing membrane protein; PFAM: HPP family protein; CBS domain containing protein; SMART: CBS domain containing protein YP_004230693.1 SMART: regulatory protein MarR; KEGG: bgf:BC1003_5185 regulatory protein MarR YP_004230694.1 KEGG: bgf:BC1003_5184 Cl-channel voltage-gated family protein; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; SMART: CBS domain containing protein YP_004230695.1 PFAM: protein of unknown function DUF488; KEGG: bgf:BC1003_5183 hypothetical protein YP_004230696.1 KEGG: bgf:BC1003_5182 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004230697.1 KEGG: bgf:BC1003_5181 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004230698.1 PFAM: secretion protein HlyD family protein; KEGG: bgf:BC1003_5180 secretion protein HlyD family protein YP_004230699.1 KEGG: bgf:BC1003_5179 regulatory protein MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004230700.1 KEGG: bxe:Bxe_B0734 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004230701.1 KEGG: bgf:BC1003_5177 transglutaminase domain-containing protein; PFAM: transglutaminase domain protein; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein YP_004230702.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; protein of unknown function DUF403; KEGG: bgf:BC1003_5176 hypothetical protein YP_004230703.1 KEGG: bgf:BC1003_5175 hypothetical protein; PFAM: Protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein YP_004230704.1 PFAM: protein of unknown function UCP012641; KEGG: bgf:BC1003_5174 hypothetical protein YP_004230705.1 PFAM: Protein of unknown function DUF3443; KEGG: bgf:BC1003_5173 hypothetical protein YP_004230706.1 PFAM: Protein of unknown function DUF2844; KEGG: bgf:BC1003_5172 hypothetical protein YP_004230707.1 KEGG: bgf:BC1003_5171 phasin family protein; TIGRFAM: phasin family protein; PFAM: Phasin YP_004230708.1 KEGG: bpy:Bphyt_4400 hypothetical protein YP_004230709.1 KEGG: bgf:BC1003_5170 hypothetical protein YP_004230710.1 KEGG: bgf:BC1003_5169 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004230711.1 KEGG: bte:BTH_II0905 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004230712.1 KEGG: bte:BTH_II0906 PTS system, glucose-specific EIIA/HPr/phosphoenolpyruvate-protein phosphotransferase components; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; phosphoryl transfer system HPr; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004230713.1 KEGG: bte:BTH_II0907 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_004230714.1 KEGG: bte:BTH_II0908 protein-N p-phosphohistidine-sugar phosphotransferase; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004230715.1 KEGG: hla:Hlac_1616 nucleic acid binding OB-fold tRNA/helicase-type YP_004230716.1 PFAM: cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: bgf:BC1003_5168 redoxin domain-containing protein YP_004230717.1 PFAM: Redoxin domain protein; KEGG: bgf:BC1003_5167 redoxin domain-containing protein YP_004230718.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5166 LysR family transcriptional regulator YP_004230719.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bgf:BC1003_5165 4-oxalocrotonate tautomerase YP_004230720.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5164 short-chain dehydrogenase/reductase SDR YP_004230721.1 KEGG: bgf:BC1003_5163 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_004230722.1 KEGG: bgf:BC1003_5155 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_004230723.1 KEGG: bgf:BC1003_5154 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004230724.1 KEGG: bgf:BC1003_5153 hypothetical protein YP_004230725.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bgf:BC1003_5152 glutathione-dependent formaldehyde-activating GFA YP_004230726.1 KEGG: bgf:BC1003_5151 peroxiredoxin, Ohr subfamily; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_004230727.1 PFAM: protein of unknown function DUF190; KEGG: bgf:BC1003_5150 hypothetical protein YP_004230728.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: bgf:BC1003_5149 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004230729.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bgf:BC1003_5148 activator of HSP90 ATPase 1 family protein YP_004230730.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bgf:BC1003_5147 endonuclease/exonuclease/phosphatase YP_004230731.1 KEGG: bgf:BC1003_5146 hypothetical protein YP_004230732.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bac:BamMC406_5765 hypothetical protein YP_004230733.1 KEGG: bgf:BC1003_5145 hypothetical protein YP_004230734.1 KEGG: ppl:POSPLDRAFT_99458 hypothetical protein YP_004230735.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bgf:BC1003_5144 alcohol dehydrogenase GroES domain-containing protein YP_004230736.1 KEGG: bge:BC1002_4521 hypothetical protein YP_004230737.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bpy:Bphyt_4342 lysine exporter protein (LysE/YggA) YP_004230738.1 KEGG: bgf:BC1003_5132 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004230739.1 PFAM: aminotransferase class-III; KEGG: bgf:BC1003_5131 aminotransferase class-III YP_004230740.1 KEGG: bgf:BC1003_5130 putative transcription elongation factor YP_004230741.1 KEGG: bgf:BC1003_5129 hypothetical protein YP_004230742.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_5121 extracellular ligand-binding receptor YP_004230743.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; cytochrome c class I; KEGG: bgf:BC1003_5120 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein YP_004230744.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: bxe:Bxe_B0662 putative oxidoreductase alpha subunit YP_004230745.1 PFAM: amidohydrolase; KEGG: bgf:BC1003_5118 amidohydrolase YP_004230746.1 KEGG: bgf:BC1003_5117 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004230747.1 KEGG: bgf:BC1003_5116 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004230748.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_5115 inner-membrane translocator YP_004230749.1 PFAM: protein of unknown function DUF1185; KEGG: bgf:BC1003_5114 hypothetical protein YP_004230750.1 PFAM: protein of unknown function DUF1185; KEGG: bpy:Bphyt_4325 protein of unknown function DUF1185 YP_004230751.1 PFAM: ApbE family lipoprotein; KEGG: bgf:BC1003_5112 ApbE family lipoprotein YP_004230752.1 manually curated; KEGG: bgf:BC1003_5111 6-hydroxynicotinate reductase YP_004230753.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_5110 regulatory protein TetR YP_004230754.1 TIGRFAM: 4-carboxymuconolactone decarboxylase; KEGG: bgf:BC1003_5109 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase YP_004230755.1 KEGG: bgf:BC1003_5108 3-oxoadipate enol-lactonase; TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold YP_004230756.1 KEGG: bgf:BC1003_5107 3-carboxy-cis,cis-muconate cycloisomerase; TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; Adenylosuccinate lyase-like YP_004230757.1 SMART: coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: bgf:BC1003_5106 3-oxoacid CoA-transferase subunit B; PFAM: coenzyme A transferase YP_004230758.1 SMART: coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: bgf:BC1003_5105 3-oxoacid CoA-transferase subunit A; PFAM: coenzyme A transferase YP_004230759.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5104 LysR family transcriptional regulator YP_004230760.1 TIGRFAM: GTP cyclohydrolase I; KEGG: bgf:BC1003_5103 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004230761.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_5102 hypothetical protein YP_004230762.1 KEGG: bgf:BC1003_5101 putative DedA-like transmembrane protein YP_004230763.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Cache domain protein; KEGG: bgf:BC1003_5100 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004230764.1 KEGG: bgf:BC1003_5099 CHAD domain containing protein; PFAM: CHAD domain containing protein; SMART: CHAD domain containing protein YP_004230765.1 PFAM: phosphate transporter; KEGG: bgf:BC1003_5098 phosphate transporter YP_004230766.1 PFAM: protein of unknown function DUF344; KEGG: bgf:BC1003_5097 hypothetical protein YP_004230767.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bgf:BC1003_5096 glyoxalase/bleomycin resistance protein/dioxygenase YP_004230768.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bgf:BC1003_5095 HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein YP_004230769.1 TIGRFAM: gamma-glutamyltransferase; KEGG: bgf:BC1003_5090 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004230770.1 PFAM: aminotransferase class-III; KEGG: bgf:BC1003_5089 aminotransferase class-III YP_004230771.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_5088 aldehyde dehydrogenase YP_004230772.1 KEGG: bgf:BC1003_5087 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004230773.1 KEGG: bgf:BC1003_5086 ectoine utilization protein EutE; TIGRFAM: ectoine utilization protein EutE; PFAM: Succinylglutamate desuccinylase/aspartoacylase YP_004230774.1 KEGG: bgf:BC1003_5085 ectoine utilization protein EutD; TIGRFAM: ectoine utilization protein EutD; PFAM: peptidase M24; creatinase YP_004230775.1 TIGRFAM: ectoine utilization protein EutC; KEGG: bgf:BC1003_5084 ectoine utilization protein EutC; PFAM: ornithine cyclodeaminase/mu-crystallin YP_004230776.1 KEGG: bgf:BC1003_5083 ectoine utilization protein EutB; TIGRFAM: ectoine utilization protein EutB; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004230777.1 KEGG: bgf:BC1003_5082 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004230778.1 TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bgf:BC1003_5081 ectoine/hydroxyectoine ABC transporter solute-binding protein; SMART: extracellular solute-binding protein family 3 YP_004230779.1 KEGG: bgf:BC1003_5080 ectoine/hydroxyectoine ABC transporter permease EhuC; TIGRFAM: ectoine/hydroxyectoine ABC transporter, permease protein EhuC; polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004230780.1 KEGG: bgf:BC1003_5079 ectoine/hydroxyectoine ABC transporter permease EhuD; TIGRFAM: ectoine/hydroxyectoine ABC transporter, permease protein EhuD; polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004230781.1 TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein; PFAM: ABC transporter related; KEGG: bgf:BC1003_5078 ectoine/hydroxyectoine ABC transporter ATP-binding protein; SMART: AAA ATPase YP_004230782.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5077 major facilitator superfamily protein YP_004230783.1 PFAM: Nucleotidyl transferase; KEGG: bgf:BC1003_5076 hypothetical protein YP_004230784.1 KEGG: bgf:BC1003_5075 hypothetical protein YP_004230785.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bgf:BC1003_5074 2OG-Fe(II) oxygenase YP_004230786.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bxe:Bxe_B0624 hypothetical protein YP_004230787.1 KEGG: bgf:BC1003_5072 hypothetical protein YP_004230788.1 PFAM: protein of unknown function DUF839; KEGG: bgf:BC1003_5071 hypothetical protein YP_004230789.1 KEGG: bgf:BC1003_5070 hypothetical protein YP_004230790.1 manually curated; KEGG: bgf:BC1003_5069 hypothetical protein YP_004230791.1 KEGG: bph:Bphy_7015 type VI secretion protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_004230792.1 KEGG: ana:alr0642 two-component sensor histidine kinase YP_004230793.1 KEGG: bph:Bphy_5198 hypothetical protein YP_004230794.1 KEGG: bxe:Bxe_B2596 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_004230795.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: bgf:BC1003_5068 membrane-bound metal-dependent hydrolase YP_004230796.1 KEGG: bgf:BC1003_5067 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004230797.1 KEGG: bgf:BC1003_5066 serine O-acetyltransferase YP_004230798.1 KEGG: bgf:BC1003_5065 hypothetical protein YP_004230799.1 PFAM: Protein of unknown function DUF3005; KEGG: bgf:BC1003_5064 hypothetical protein YP_004230800.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5063 dTDP-4-dehydrorhamnose reductase YP_004230801.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_5062 binding-protein-dependent transport systems inner membrane component YP_004230802.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_5061 binding-protein-dependent transport systems inner membrane component YP_004230803.1 KEGG: bgf:BC1003_5060 ABC transporter-like protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004230804.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_5059 extracellular solute-binding protein family 1 YP_004230805.1 KEGG: bgf:BC1003_5058 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein YP_004230806.1 manually curated; KEGG: bge:BC1002_4602 hypothetical protein YP_004230807.1 KEGG: bgf:BC1003_5057 LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_004230808.1 KEGG: bgf:BC1003_5056 hypothetical protein YP_004230809.1 KEGG: bgf:BC1003_5055 acyl-homoserine-lactone synthase; PFAM: autoinducer synthesis protein YP_004230810.1 KEGG: bpy:Bphyt_4274 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR domain protein YP_004230811.1 PFAM: UspA domain-containing protein; KEGG: bgf:BC1003_5054 UspA domain-containing protein YP_004230812.1 KEGG: bgf:BC1003_5053 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004230813.1 SMART: Transketolase central region; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: bgf:BC1003_5052 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component YP_004230814.1 KEGG: bgf:BC1003_5051 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004230815.1 KEGG: bgf:BC1003_5050 Crp/Fnr family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_004230816.1 PFAM: protein of unknown function DUF323; KEGG: bgf:BC1003_5049 hypothetical protein YP_004230817.1 PFAM: Aldehyde Dehydrogenase; KEGG: cse:Cseg_1739 benzaldehyde dehydrogenase YP_004230818.1 KEGG: amd:AMED_5426 short-chain dehydrogenase/reductase SDR YP_004230819.1 PFAM: Carbohydrate-selective porin OprB; KEGG: avi:Avi_5314 carbohydrate-selective porin YP_004230820.1 PFAM: major facilitator superfamily MFS_1; KEGG: cse:Cseg_1748 major facilitator superfamily protein YP_004230821.1 PFAM: regulatory protein GntR HTH; KEGG: cse:Cseg_1747 regulatory protein GntR HTH YP_004230822.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cse:Cseg_1746 short-chain dehydrogenase/reductase SDR YP_004230823.1 KEGG: cse:Cseg_1745 carotenoid oxygenase; manually curated; PFAM: Carotenoid oxygenase YP_004230824.1 KEGG: cse:Cseg_1727 hypothetical protein YP_004230825.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain-containing protein; KEGG: cse:Cseg_1728 acyl-CoA dehydrogenase type 2 domain-containing protein YP_004230826.1 KEGG: pna:Pnap_0608 hypothetical protein YP_004230827.1 PFAM: Acetoacetate decarboxylase; KEGG: avi:Avi_5319 hypothetical protein YP_004230828.1 PFAM: Aldehyde Dehydrogenase; KEGG: pna:Pnap_1022 aldehyde dehydrogenase YP_004230829.1 KEGG: avi:Avi_5320 fumarylacetoacetate (FAA) hydrolase family protein; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004230830.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pla:Plav_1539 glyoxalase/bleomycin resistance protein/dioxygenase YP_004230831.1 KEGG: sno:Snov_0513 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR domain protein YP_004230832.1 PFAM: major facilitator superfamily MFS_1; KEGG: pna:Pnap_0609 major facilitator superfamily transporter YP_004230833.1 PFAM: monooxygenase FAD-binding; KEGG: rop:ROP_42950 3-(3-hydroxyphenyl)propionate hydroxylase YP_004230834.1 KEGG: reh:H16_A1246 hypothetical protein YP_004230835.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reu:Reut_B5807 glyoxalase/bleomycin resistance protein/dioxygenase YP_004230836.1 KEGG: reu:Reut_B5809 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004230837.1 KEGG: ajs:Ajs_0068 flavin reductase domain-containing protein; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_004230838.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nar:Saro_0794 short-chain dehydrogenase/reductase SDR YP_004230839.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cse:Cseg_1724 short-chain dehydrogenase/reductase SDR YP_004230840.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain-containing protein; KEGG: cse:Cseg_1723 acyl-CoA dehydrogenase type 2 domain-containing protein YP_004230841.1 manually curated; KEGG: cse:Cseg_1722 hypothetical protein YP_004230842.1 KEGG: cse:Cseg_1716 9-cis-epoxycarotenoid dioxygenase; PFAM: Carotenoid oxygenase YP_004230843.1 KEGG: cse:Cseg_1717 hypothetical protein YP_004230844.1 PFAM: major facilitator superfamily MFS_1; KEGG: cse:Cseg_1718 major facilitator superfamily protein YP_004230845.1 KEGG: cse:Cseg_1719 hypothetical protein YP_004230846.1 PFAM: Aldehyde Dehydrogenase; KEGG: cse:Cseg_1739 benzaldehyde dehydrogenase YP_004230847.1 PFAM: Carbohydrate-selective porin OprB; KEGG: avi:Avi_5314 carbohydrate-selective porin YP_004230848.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bam:Bamb_4316 carboxymuconolactone decarboxylase YP_004230849.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ppw:PputW619_2295 glycine betaine transporter periplasmic subunit YP_004230850.1 KEGG: bcm:Bcenmc03_6646 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004230851.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bam:Bamb_4317 glycine betaine transporter periplasmic subunit YP_004230852.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_4318 binding-protein-dependent transport systems inner membrane component YP_004230853.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bam:Bamb_4319 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase; CBS domain containing protein YP_004230854.1 PFAM: NIPSNAP family containing protein; KEGG: atu:Atu5224 hypothetical protein YP_004230855.1 PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_4321 alpha/beta hydrolase fold YP_004230856.1 PFAM: Luciferase-like, subgroup; KEGG: bam:Bamb_4322 luciferase family protein YP_004230857.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_4323 aldehyde dehydrogenase YP_004230858.1 KEGG: bam:Bamb_4324 flavin reductase domain-containing protein; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_004230859.1 SMART: GAF domain protein; KEGG: bam:Bamb_4325 hypothetical protein YP_004230860.1 PFAM: protein of unknown function DUF1185; KEGG: bam:Bamb_4326 hypothetical protein YP_004230861.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bam:Bamb_4327 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_004230862.1 KEGG: bgf:BC1003_4208 hypothetical protein YP_004230863.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: bgf:BC1003_4209 microcystin LR degradation protein MlrC-like protein YP_004230864.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_2231 major facilitator superfamily protein YP_004230865.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_6176 transcriptional regulator, LysR family YP_004230866.1 KEGG: bgf:BC1003_1391 hypothetical protein YP_004230867.1 KEGG: bgf:BC1003_1390 hypothetical protein YP_004230868.1 KEGG: bgf:BC1003_1389 hypothetical protein YP_004230869.1 KEGG: bgf:BC1003_3533 hypothetical protein YP_004230870.1 PFAM: acriflavin resistance protein; KEGG: bgf:BC1003_2089 acriflavin resistance protein YP_004230871.1 KEGG: bgf:BC1003_2090 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004230872.1 KEGG: bgf:BC1003_2091 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004230873.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bgf:BC1003_2092 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004230874.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: bgf:BC1003_2093 winged helix family two component transcriptional regulator; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004230875.1 KEGG: mlb:MLBr_00299 putative oxidoreductase YP_004230876.1 KEGG: bgf:BC1003_2235 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004230877.1 PFAM: regulatory protein TetR; KEGG: bcj:BCAM2652 TetR family regulatory protein YP_004230878.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bcm:Bcenmc03_4814 short chain dehydrogenase YP_004230879.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bpy:Bphyt_5017 di-haem cytochrome c peroxidase YP_004230880.1 PFAM: phosphoesterase; KEGG: bpy:Bphyt_4267 phosphoesterase YP_004230881.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: dac:Daci_1384 L-lactate dehydrogenase (cytochrome) YP_004230882.1 PFAM: amidohydrolase 2; KEGG: bcm:Bcenmc03_4881 amidohydrolase 2 YP_004230883.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpf:Rpic12D_4100 major facilitator superfamily MFS_1 YP_004230884.1 PFAM: protein of unknown function DUF894 DitE; KEGG: bph:Bphy_6034 major facilitator transporter YP_004230885.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_6033 major facilitator transporter YP_004230886.1 PFAM: amidohydrolase 2; KEGG: bph:Bphy_6032 amidohydrolase 2 YP_004230887.1 PFAM: porin Gram-negative type; KEGG: bph:Bphy_6031 porin YP_004230888.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_6030 major facilitator transporter YP_004230889.1 PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; KEGG: bph:Bphy_6029 SMP-30/gluconolaconase/LRE domain-containing protein YP_004230890.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bph:Bphy_6028 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004230891.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bph:Bphy_6027 dimethylmenaquinone methyltransferase YP_004230892.1 KEGG: bcj:BCAM2589 IclR family regulatory protein; PFAM: regulatory protein IclR; SMART: regulatory protein IclR YP_004230893.1 KEGG: bpy:Bphyt_1081 hypothetical protein YP_004230894.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1082 transcriptional regulator, LysR family YP_004230895.1 KEGG: bpy:Bphyt_6642 hypothetical protein YP_004230896.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); KEGG: rcu:RCOM_1829220 (S)-2-haloacid dehalogenase IVA, putative YP_004230897.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1623 major facilitator superfamily protein YP_004230898.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_1622 short-chain dehydrogenase/reductase SDR YP_004230899.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1621 LysR family transcriptional regulator YP_004230900.1 PFAM: Luciferase-like, subgroup; KEGG: rec:RHECIAT_CH0002812 alkanal monooxygenase subunit alpha YP_004230901.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_1619 short-chain dehydrogenase/reductase SDR YP_004230902.1 PFAM: NUDIX hydrolase; KEGG: bgl:bglu_2g06710 MutT/NUDIX-family hydrolase YP_004230903.1 PFAM: Methyltransferase type 11; KEGG: bgf:BC1003_3838 methyltransferase type 11 YP_004230904.1 PFAM: protein of unknown function DUF1348; KEGG: bac:BamMC406_5703 hypothetical protein YP_004230905.1 TIGRFAM: cyanate lyase; KEGG: bac:BamMC406_5702 cyanate hydratase; PFAM: Cyanate lyase domain protein YP_004230906.1 KEGG: bac:BamMC406_5701 carbonate dehydratase; PFAM: carbonic anhydrase YP_004230907.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bam:Bamb_5949 DNA-binding transcriptional regulator CynR YP_004230908.1 PFAM: protein of unknown function DUF188; KEGG: bph:Bphy_5627 hypothetical protein YP_004230909.1 PFAM: natural resistance-associated macrophage protein; KEGG: bge:BC1002_5131 natural resistance-associated macrophage protein YP_004230910.1 KEGG: bmj:BMULJ_04782 hypothetical protein YP_004230911.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: bxe:Bxe_B1618 hypothetical protein YP_004230912.1 KEGG: bph:Bphy_4475 hypothetical protein YP_004230913.1 KEGG: bge:BC1002_4027 hypothetical protein YP_004230914.1 PFAM: natural resistance-associated macrophage protein; KEGG: bge:BC1002_4260 natural resistance-associated macrophage protein YP_004230916.1 KEGG: bph:Bphy_6053 hypothetical protein YP_004230917.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bph:Bphy_5179 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004230918.1 KEGG: cti:RALTA_B0309 putative acetoacetyl-coenzyme A synthetase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding YP_004230919.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: bpy:Bphyt_5906 protein of unknown function DUF861 cupin_3 YP_004230920.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_5907 FAD dependent oxidoreductase YP_004230921.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_6686 LysR family transcriptional regulator YP_004230922.1 SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: rme:Rmet_1768 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding YP_004230923.1 KEGG: bch:Bcen2424_6681 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer YP_004230924.1 KEGG: bge:BC1002_6639 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004230925.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bge:BC1002_6638 short-chain dehydrogenase/reductase SDR YP_004230926.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1385 LysR family transcriptional regulator YP_004230927.1 KEGG: bgf:BC1003_1384 NmrA family protein YP_004230928.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bgf:BC1003_4983 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004230929.1 KEGG: bgf:BC1003_3858 hypothetical protein YP_004230930.1 KEGG: bgf:BC1003_3859 hypothetical protein YP_004230931.1 PFAM: MltA-interacting MipA family protein; KEGG: bgf:BC1003_3860 MltA-interacting MipA family protein YP_004230932.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bge:BC1002_1257 transcriptional regulator, LysR family YP_004230933.1 PFAM: sodium:dicarboxylate symporter; KEGG: bpy:Bphyt_5522 sodium:dicarboxylate symporter YP_004230934.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_5521 extracellular solute-binding protein family 1 YP_004230935.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: bgf:BC1003_4979 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_004230936.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: bge:BC1002_6754 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver YP_004230937.1 KEGG: bge:BC1002_6755 putative signal peptide protein YP_004230938.1 KEGG: bge:BC1002_4933 NHL repeat containing protein YP_004230939.1 KEGG: bgf:BC1003_4978 hypothetical protein YP_004230940.1 PFAM: PRC-barrel domain protein; KEGG: bgf:BC1003_4977 PRC-barrel domain-containing protein YP_004230941.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4976 LysR family transcriptional regulator YP_004230942.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4975 major facilitator superfamily protein YP_004230943.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_4974 alpha/beta hydrolase fold protein YP_004230944.1 PFAM: helix-turn-helix protein RpiR; KEGG: bgf:BC1003_4973 putative transcriptional regulator, RpiR family YP_004230945.1 KEGG: bgf:BC1003_4972 D-Ala-D-Ala dipeptidase; PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase YP_004230946.1 PFAM: extracellular solute-binding protein family 5; KEGG: bgf:BC1003_4971 extracellular solute-binding protein family 5 YP_004230947.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4970 binding-protein-dependent transport systems inner membrane component YP_004230948.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4969 binding-protein-dependent transport systems inner membrane component YP_004230949.1 KEGG: bgf:BC1003_4968 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004230950.1 KEGG: bgf:BC1003_4967 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004230951.1 KEGG: bgf:BC1003_4966 hypothetical protein YP_004230952.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_4964 extracellular ligand-binding receptor YP_004230953.1 KEGG: bgf:BC1003_4963 hypothetical protein YP_004230954.1 KEGG: bcj:BCAS0631 putative CheB family methylesterase; PFAM: CheB methylesterase YP_004230955.1 KEGG: mno:Mnod_3757 hypothetical protein YP_004230956.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: bcj:BCAS0632 hybrid two-component system kinase-response regulator protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver YP_004230957.1 KEGG: bgf:BC1003_4962 hypothetical protein YP_004230958.1 PFAM: porin Gram-negative type; KEGG: bgl:bglu_2g12640 porin, gram-negative type YP_004230959.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bgf:BC1003_4961 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain-containing protein YP_004230960.1 KEGG: bgf:BC1003_4960 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004230961.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_4959 GCN5-related N-acetyltransferase YP_004230962.1 KEGG: bgf:BC1003_4957 phosphoesterase PA-phosphatase related protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004230963.1 PFAM: surface antigen (D15); Polypeptide-transport-associated domain protein ShlB-type; KEGG: bgf:BC1003_4956 hemolysin activator HlyB domain-containing protein YP_004230964.1 KEGG: bgf:BC1003_4955 filamentous hemagglutinin family outer membrane protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein YP_004230965.1 KEGG: bgf:BC1003_4954 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein YP_004230966.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: bgf:BC1003_4953 C4-dicarboxylate transporter/malic acid transport protein YP_004230967.1 TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; KEGG: bph:Bphy_3974 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein YP_004230968.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bph:Bphy_3975 binding-protein-dependent transport systems inner membrane component YP_004230969.1 KEGG: bge:BC1002_2563 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004230970.1 KEGG: bph:Bphy_3977 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989 YP_004230971.1 KEGG: bph:Bphy_3978 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989 YP_004230973.1 TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; biotin carboxylase domain protein; Carbamoyl-phosphate synthetase large chain domain protein; biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; KEGG: bph:Bphy_3979 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; biotin carboxylase domain protein; Allophanate hydrolase subunit 1 YP_004230974.1 KEGG: bph:Bphy_3980 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase YP_004230975.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_1322 OmpA/MotB domain-containing protein YP_004230976.1 PFAM: YadA domain-containing protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bpy:Bphyt_2395 haemagluttinin domain protein YP_004230977.1 PFAM: YadA domain-containing protein; Hep_Hag repeat-containing protein; Haemagluttinin domain protein; KEGG: bgf:BC1003_1319 YadA domain-containing protein YP_004230978.1 manually curated; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; KEGG: bgf:BC1003_1318 AraC family two component transcriptional regulator; SMART: response regulator receiver; Helix-turn-helix, AraC domain YP_004230979.1 KEGG: bgf:BC1003_1317 integral membrane sensor signal transduction histidine kinase; PFAM: Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004230980.1 KEGG: bgf:BC1003_1316 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004230981.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-4 domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: pae:PA1181 putative sensor protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; EAL domain protein YP_004230982.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rsl:RPSI07_mp0097 putative signal transduction GGDEF domain transmembrane protein; SMART: GGDEF domain containing protein YP_004230983.1 KEGG: bgf:BC1003_4952 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004230984.1 PFAM: heat shock protein Hsp20; KEGG: bgf:BC1003_4951 heat shock protein HSP20 YP_004230985.1 KEGG: bgf:BC1003_4948 hypothetical protein YP_004230986.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bgf:BC1003_4947 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004230987.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: bgf:BC1003_4946 Mg2 transporter protein CorA family protein YP_004230988.1 KEGG: bgf:BC1003_4945 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_004230989.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bgf:BC1003_4944 periplasmic-binding protein/LacI transcriptional regulator YP_004230990.1 KEGG: bgf:BC1003_4943 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; leucine-rich repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; leucine-rich repeat-containing protein typical subtype YP_004230991.1 KEGG: bxe:Bxe_B0556 methylated-DNA-(protein)-cysteine S-methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_004230992.1 KEGG: bgf:BC1003_4941 hypothetical protein YP_004230993.1 KEGG: bgf:BC1003_4940 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer YP_004230994.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4939 major facilitator superfamily protein YP_004230995.1 TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; KEGG: bpy:Bphyt_4103 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase YP_004230996.1 KEGG: bgf:BC1003_4938 glucarate dehydratase; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein YP_004230997.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4937 major facilitator superfamily protein YP_004230998.1 KEGG: bgf:BC1003_4936 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH YP_004230999.1 KEGG: apr:Apre_1834 histidine kinase YP_004231000.1 KEGG: bgf:BC1003_4935 hypothetical protein YP_004231001.1 PFAM: protein of unknown function DUF1446; KEGG: bpy:Bphyt_4091 protein of unknown function DUF1446 YP_004231002.1 KEGG: bgf:BC1003_4933 citrate/H+ symporter, CitMHS family; TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter YP_004231003.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4932 LysR family transcriptional regulator YP_004231004.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_4931 alpha/beta hydrolase fold protein YP_004231005.1 KEGG: bgf:BC1003_4930 hypothetical protein YP_004231006.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: bgf:BC1003_4929 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type YP_004231007.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bgf:BC1003_4928 taurine catabolism dioxygenase TauD/TfdA YP_004231008.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bpy:Bphyt_4062 antibiotic biosynthesis monooxygenase YP_004231009.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bpy:Bphyt_4061 iron-containing alcohol dehydrogenase YP_004231010.1 KEGG: bgf:BC1003_4926 hypothetical protein YP_004231011.1 KEGG: bgf:BC1003_4925 putative lipoprotein YP_004231012.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bgf:BC1003_4924 isoprenylcysteine carboxyl methyltransferase YP_004231013.1 KEGG: bgf:BC1003_4923 hypothetical protein YP_004231014.1 KEGG: bpy:Bphyt_4037 histidine kinase; PFAM: Two-component sensor kinase domain-containing protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004231015.1 KEGG: bxe:Bxe_B0496 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004231016.1 KEGG: bpy:Bphyt_4035 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_004231017.1 KEGG: bxe:Bxe_B0494 nitrate/sulfonate/bicarbonate ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004231018.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0493 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein YP_004231019.1 SMART: Tetratricopeptide repeat; KEGG: bgf:BC1003_5791 tetratricopeptide repeat-containing protein YP_004231020.1 PFAM: protein of unknown function DUF847; Peptidoglycan binding domain; KEGG: bge:BC1002_4734 protein of unknown function DUF847 YP_004231021.1 KEGG: bxe:Bxe_B0490 hypothetical protein YP_004231022.1 KEGG: bge:BC1002_4736 phospholipase C; PFAM: phosphoesterase YP_004231023.1 KEGG: bgf:BC1003_4922 hypothetical protein YP_004231024.1 KEGG: bgf:BC1003_4921 hypothetical protein YP_004231025.1 PFAM: acyltransferase 3; KEGG: bxe:Bxe_B0486 hypothetical protein YP_004231026.1 PFAM: Squalene/phytoene synthase; KEGG: bgf:BC1003_4920 squalene/phytoene synthase YP_004231027.1 KEGG: bgf:BC1003_4919 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004231028.1 KEGG: bgf:BC1003_4918 non-specific serine/threonine protein kinase; PFAM: Circadian clock protein KaiC central region YP_004231029.1 KEGG: bgf:BC1003_4917 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004231030.1 KEGG: bgf:BC1003_4916 beta-lactamase; PFAM: beta-lactamase YP_004231031.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B0481 LysR family transcriptional regulator YP_004231032.1 KEGG: bgf:BC1003_4914 hypothetical protein YP_004231033.1 KEGG: bgf:BC1003_4913 hypothetical protein YP_004231034.1 KEGG: bgf:BC1003_4912 hypothetical protein YP_004231035.1 KEGG: bgf:BC1003_4911 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein YP_004231036.1 KEGG: bgf:BC1003_4910 putative sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase YP_004231037.1 KEGG: bgf:BC1003_4909 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: ABC transporter transmembrane region; peptidase C39 bacteriocin processing; cyclic nucleotide-binding; ABC transporter related; SMART: AAA ATPase; cyclic nucleotide-binding YP_004231038.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bxe:Bxe_B0474 putative peptidyl-prolyl isomerase YP_004231039.1 PFAM: secretion protein HlyD family protein; KEGG: bgf:BC1003_4907 secretion protein HlyD family protein YP_004231040.1 KEGG: bgf:BC1003_4906 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein YP_004231041.1 KEGG: bgf:BC1003_4905 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004231042.1 KEGG: bgf:BC1003_4904 hypothetical protein YP_004231043.1 KEGG: bgf:BC1003_4903 hypothetical protein YP_004231044.1 KEGG: bgf:BC1003_4902 hypothetical protein YP_004231045.1 PFAM: protein of unknown function DUF323; peptidase C14 caspase catalytic subunit p20; KEGG: bgf:BC1003_4901 hypothetical protein YP_004231046.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: bgf:BC1003_4900 serine/threonine protein kinase YP_004231047.1 KEGG: bgf:BC1003_4899 hypothetical protein YP_004231048.1 KEGG: bpy:Bphyt_7239 hypothetical protein YP_004231049.1 KEGG: bgf:BC1003_4897 hypothetical protein YP_004231050.1 KEGG: bgf:BC1003_4896 hypothetical protein YP_004231051.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_4895 regulatory protein TetR YP_004231052.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4894 major facilitator superfamily protein YP_004231053.1 PFAM: Protein of unknown function DUF3309; KEGG: bgf:BC1003_4893 hypothetical protein YP_004231054.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4892 short-chain dehydrogenase/reductase SDR YP_004231055.1 KEGG: bgf:BC1003_4891 hypothetical protein YP_004231056.1 KEGG: bgf:BC1003_4890 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004231057.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4889 major facilitator superfamily protein YP_004231058.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: bgf:BC1003_4888 4'-phosphopantetheinyl transferase YP_004231059.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4887 major facilitator superfamily protein YP_004231060.1 PFAM: Protein of unknown function DUF2783; KEGG: bgf:BC1003_4886 hypothetical protein YP_004231061.1 PFAM: monooxygenase FAD-binding; KEGG: bgf:BC1003_4885 monooxygenase FAD-binding protein YP_004231062.1 SMART: beta-lactamase domain protein; KEGG: bgf:BC1003_4884 hypothetical protein YP_004231063.1 KEGG: bgf:BC1003_4883 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004231064.1 KEGG: bgf:BC1003_4882 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004231065.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bgf:BC1003_4881 RpiR family transcriptional regulator YP_004231066.1 KEGG: bgf:BC1003_4880 ABC transporter-like protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004231067.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_7209 short chain dehydrogenase YP_004231068.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_4878 extracellular solute-binding protein family 1 YP_004231069.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4877 binding-protein-dependent transport systems inner membrane component YP_004231070.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4876 binding-protein-dependent transport systems inner membrane component YP_004231071.1 PFAM: protein of unknown function DUF1330; KEGG: bgf:BC1003_4875 hypothetical protein YP_004231072.1 manually curated; KEGG: bgf:BC1003_4874 hypothetical protein YP_004231073.1 KEGG: bgf:BC1003_4873 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_004231074.1 KEGG: bgf:BC1003_4872 hypothetical protein YP_004231075.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4870 major facilitator superfamily protein YP_004231076.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4869 LysR family transcriptional regulator YP_004231077.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bgf:BC1003_4868 formyl-CoA transferase YP_004231078.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_4867 enoyl-CoA hydratase/isomerase YP_004231079.1 KEGG: bgf:BC1003_4866 17 kDa surface antigen YP_004231080.1 KEGG: bgf:BC1003_4865 metallophosphoesterase; PFAM: metallophosphoesterase; SMART: Fibronectin type III domain protein YP_004231081.1 KEGG: bgf:BC1003_4864 hypothetical protein YP_004231082.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bgf:BC1003_4863 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_004231083.1 PFAM: protein of unknown function DUF1697; KEGG: bgf:BC1003_4856 hypothetical protein YP_004231084.1 PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: bgf:BC1003_4855 hypothetical protein YP_004231085.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bgf:BC1003_4854 hypothetical protein YP_004231086.1 KEGG: bgf:BC1003_4853 hypothetical protein YP_004231087.1 KEGG: bgf:BC1003_4852 hypothetical protein YP_004231088.1 KEGG: bgf:BC1003_4851 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004231089.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4850 short-chain dehydrogenase/reductase SDR YP_004231090.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4849 major facilitator transporter YP_004231091.1 KEGG: bph:Bphy_3549 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004231092.1 PFAM: regulatory protein TetR; KEGG: ddc:Dd586_1400 transcriptional regulator, TetR family YP_004231093.1 KEGG: bph:Bphy_3547 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004231094.1 PFAM: acriflavin resistance protein; KEGG: bcm:Bcenmc03_6138 acriflavin resistance protein YP_004231095.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_3447 short chain dehydrogenase YP_004231096.1 PFAM: alanine racemase domain protein; KEGG: bgf:BC1003_5893 alanine racemase domain-containing protein YP_004231097.1 PFAM: Aldehyde Dehydrogenase; KEGG: bam:Bamb_6363 betaine-aldehyde dehydrogenase YP_004231098.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5894 LysR family transcriptional regulator YP_004231099.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bgf:BC1003_5927 fumarylacetoacetate (FAA) hydrolase YP_004231100.1 KEGG: bgf:BC1003_5926 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004231101.1 KEGG: bgf:BC1003_5925 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004231102.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5924 major facilitator superfamily protein YP_004231103.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B2390 LysR family transcriptional regulator YP_004231104.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_3909 major facilitator superfamily protein YP_004231105.1 PFAM: Extracellular ligand-binding receptor; KEGG: bph:Bphy_6618 extracellular ligand-binding receptor YP_004231106.1 PFAM: FAD dependent oxidoreductase; KEGG: bph:Bphy_6619 FAD dependent oxidoreductase YP_004231107.1 PFAM: amino acid permease-associated region; KEGG: bph:Bphy_6620 amino acid permease-associated region YP_004231108.1 KEGG: bph:Bphy_6621 transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004231109.1 TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: phosphoesterase PA-phosphatase related; KEGG: rsl:RPSI07_3250 conserved protein of unknown function (phosphatase domain); SMART: phosphoesterase PA-phosphatase related YP_004231110.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: bgf:BC1003_4836 NADH:flavin oxidoreductase/NADH oxidase YP_004231111.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4835 short-chain dehydrogenase/reductase SDR YP_004231112.1 KEGG: bgf:BC1003_4834 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004231113.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bgf:BC1003_4833 enoyl-CoA hydratase/isomerase YP_004231114.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bxe:Bxe_B0278 putative acyl-CoA dehydrogenase YP_004231115.1 PFAM: thioesterase superfamily protein; KEGG: bgf:BC1003_4831 thioesterase superfamily protein YP_004231116.1 PFAM: Endoribonuclease L-PSP; KEGG: bgf:BC1003_4830 endoribonuclease L-PSP YP_004231117.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgf:BC1003_4829 AMP-dependent synthetase and ligase YP_004231118.1 KEGG: bgf:BC1003_4828 carboxymethylenebutenolidase; PFAM: protein of unknown function DUF1486 YP_004231119.1 KEGG: bgf:BC1003_4823 drug resistance transporter EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004231120.1 SMART: Tetratricopeptide repeat; KEGG: bxe:Bxe_B2618 hypothetical protein YP_004231121.1 KEGG: bgf:BC1003_4821 hypothetical protein YP_004231122.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: azo:azo3708 dioxygenase-family protein YP_004231123.1 KEGG: bsu:BSU05030 putative helicase; mobile element region YP_004231124.1 KEGG: spl:Spea_2164 hypothetical protein YP_004231125.1 KEGG: dat:HRM2_19340 hypothetical protein YP_004231126.1 KEGG: aca:ACP_3209 hypothetical protein YP_004231127.1 PFAM: transposase mutator type; KEGG: bvi:Bcep1808_5005 transposase, mutator type YP_004231128.1 KEGG: bgf:BC1003_4818 diamine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004231129.1 KEGG: bgf:BC1003_4817 flavin reductase domain-containing protein FMN-binding protein; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_004231130.1 KEGG: bgf:BC1003_4816 hypothetical protein YP_004231131.1 KEGG: bgf:BC1003_4815 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004231132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_4814 GCN5-related N-acetyltransferase YP_004231133.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0244 GNAT family acetyltransferase YP_004231134.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4812 LysR family transcriptional regulator YP_004231135.1 PFAM: Auxin Efflux Carrier; KEGG: bgf:BC1003_4811 auxin efflux carrier YP_004231136.1 KEGG: bgf:BC1003_4810 putative tranmembrane protein YP_004231137.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_4809 lysine exporter protein LysE/YggA YP_004231138.1 KEGG: bgf:BC1003_4808 putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004231139.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bgf:BC1003_4807 glyoxalase/bleomycin resistance protein/dioxygenase YP_004231140.1 PFAM: YCII-related; KEGG: bxe:Bxe_B0232 hypothetical protein YP_004231141.1 PFAM: YCII-related; KEGG: bgf:BC1003_4805 YCII-related protein YP_004231142.1 KEGG: bgf:BC1003_4804 hypothetical protein YP_004231143.1 KEGG: bps:BPSL0554 hypothetical protein YP_004231144.1 KEGG: bps:BPSL0555 hypothetical protein YP_004231145.1 KEGG: reh:H16_B0472 hypothetical protein YP_004231146.1 KEGG: bgf:BC1003_4803 hypothetical protein YP_004231147.1 PFAM: protein of unknown function DUF1488; KEGG: bgf:BC1003_4802 hypothetical protein YP_004231148.1 manually curated; KEGG: bgf:BC1003_4801 hypothetical protein YP_004231149.1 PFAM: Dopa 45-dioxygenase; KEGG: bgf:BC1003_4799 Dopa 45-dioxygenase YP_004231150.1 PFAM: High potential iron-sulfur protein; KEGG: bgf:BC1003_4798 high potential iron-sulfur protein YP_004231151.1 PFAM: nitroreductase; KEGG: bgf:BC1003_4797 nitroreductase YP_004231152.1 PFAM: aldo/keto reductase; KEGG: bgf:BC1003_4796 aldo/keto reductase YP_004231153.1 PFAM: PEBP family protein; KEGG: bgf:BC1003_4795 PEBP family protein YP_004231154.1 PFAM: ROK family protein; KEGG: bgf:BC1003_4794 ROK family protein YP_004231155.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: bgf:BC1003_4793 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_004231156.1 KEGG: bgf:BC1003_4792 hypothetical protein YP_004231157.1 KEGG: bgf:BC1003_4791 amylo-alpha-16-glucosidase; PFAM: Amylo-alpha-16-glucosidase YP_004231158.1 KEGG: bgf:BC1003_4790 hypothetical protein YP_004231159.1 TIGRFAM: phospholipase C, phosphocholine-specific; KEGG: bgf:BC1003_4789 phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756 YP_004231160.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bxe:Bxe_B0209 putative arginine/ornithine transport operon(AotO) protein YP_004231161.1 KEGG: bxe:Bxe_B0208 basic amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004231162.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_B0207 LysR family transcriptional regulator YP_004231163.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bpy:Bphyt_7086 rubredoxin-type Fe(Cys)4 protein YP_004231164.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bgf:BC1003_4781 Rieske (2Fe-2S) iron-sulfur domain-containing protein YP_004231165.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_4780 glycosyl transferase family 2 YP_004231166.1 PFAM: Cytochrome b/b6 domain; KEGG: bxe:Bxe_B0201 putative cytochrome b-561 protein YP_004231167.1 PFAM: Protein of unknown function DUF3562; KEGG: bgf:BC1003_4778 hypothetical protein YP_004231168.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_4777 FAD dependent oxidoreductase YP_004231169.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_4502 GCN5-related N-acetyltransferase YP_004231170.1 KEGG: bgf:BC1003_5030 major facilitator superfamily protein YP_004231171.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bgf:BC1003_5029 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004231172.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bgf:BC1003_5028 glyoxalase/bleomycin resistance protein/dioxygenase YP_004231173.1 KEGG: bgf:BC1003_5027 betaine-aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004231174.1 KEGG: bgf:BC1003_5026 aspartate dehydrogenase; PFAM: aspartate dehydrogenase; homoserine dehydrogenase NAD-binding YP_004231175.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: bgf:BC1003_5025 thiamine pyrophosphate TPP-binding domain-containing protein YP_004231176.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5024 short-chain dehydrogenase/reductase SDR YP_004231177.1 KEGG: bgf:BC1003_5023 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004231178.1 PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_7062 alpha/beta hydrolase fold YP_004231179.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B0177 cupin domain-containing protein YP_004231180.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_7060 short chain dehydrogenase YP_004231181.1 KEGG: bgf:BC1003_5018 hypothetical protein YP_004231182.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bgf:BC1003_5017 Rieske (2Fe-2S) iron-sulfur domain-containing protein YP_004231183.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_5016 porin gram-negative type YP_004231184.1 KEGG: bgf:BC1003_5015 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004231185.1 KEGG: bgf:BC1003_4503 hypothetical protein YP_004231186.1 KEGG: bgf:BC1003_4504 acid phosphatase; TIGRFAM: acid phosphatase; PFAM: phosphoesterase YP_004231187.1 PFAM: Protein of unknown function DUF3564; KEGG: bgf:BC1003_4505 hypothetical protein YP_004231188.1 KEGG: bgf:BC1003_4506 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A YP_004231189.1 KEGG: bgf:BC1003_4507 hypothetical protein YP_004231190.1 KEGG: bgf:BC1003_4508 hypothetical protein YP_004231191.1 KEGG: bgf:BC1003_4509 Crp/Fnr family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004231192.1 KEGG: bge:BC1002_5068 protein of unknown function DUF962 YP_004231193.1 TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: bgf:BC1003_4511 RarD protein, DMT superfamily transporter YP_004231194.1 KEGG: bgf:BC1003_4512 methyltransferase; TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260 YP_004231195.1 PFAM: acylphosphatase; KEGG: bgf:BC1003_4513 acylphosphatase YP_004231196.1 KEGG: bgf:BC1003_4514 hopanoid-associated sugar epimerase; TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004231197.1 KEGG: bgf:BC1003_4515 hypothetical protein YP_004231198.1 KEGG: bgf:BC1003_4516 hopene-associated glycosyltransferase HpnB; TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2 YP_004231199.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: bgf:BC1003_4517 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_004231200.1 KEGG: bgf:BC1003_4518 hopanoid biosynthesis associated radical SAM protein HpnH; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein YP_004231201.1 PFAM: toluene tolerance family protein; KEGG: bgf:BC1003_4519 toluene tolerance family protein YP_004231202.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: bgf:BC1003_4520 hopanoid biosynthesis associated RND transporter like protein HpnN YP_004231203.1 PFAM: VacJ family lipoprotein; KEGG: bgf:BC1003_4521 VacJ family lipoprotein YP_004231204.1 KEGG: bgf:BC1003_4522 hopanoid-associated phosphorylase; TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1 YP_004231205.1 TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; KEGG: bgf:BC1003_4523 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_004231206.1 KEGG: bgf:BC1003_4524 squalene-associated FAD-dependent desaturase; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase YP_004231207.1 TIGRFAM: squalene synthase HpnD; KEGG: bgf:BC1003_4525 squalene synthase HpnD; PFAM: Squalene/phytoene synthase YP_004231208.1 SMART: GGDEF domain containing protein; PAS domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: bgf:BC1003_4526 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; PAS fold domain protein YP_004231209.1 PFAM: CheC domain protein; KEGG: bgf:BC1003_4527 CheC, inhibitor of MCP methylation YP_004231210.1 KEGG: bgf:BC1003_4528 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004231211.1 KEGG: bgf:BC1003_4529 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004231212.1 KEGG: bgf:BC1003_4530 hypothetical protein YP_004231213.1 PFAM: NADPH-dependent FMN reductase; KEGG: bgf:BC1003_4531 NADPH-dependent FMN reductase YP_004231214.1 KEGG: bgf:BC1003_4532 hypothetical protein YP_004231215.1 KEGG: bpy:Bphyt_7017 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004231216.1 KEGG: bgf:BC1003_4769 hypothetical protein YP_004231217.1 PFAM: protein of unknown function DUF1272; KEGG: bgf:BC1003_4768 hypothetical protein YP_004231218.1 KEGG: bgf:BC1003_4767 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related YP_004231219.1 KEGG: bgf:BC1003_4766 cobyrinic acid ac-diamide synthase YP_004231220.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bgf:BC1003_4765 ParB-like partition protein; SMART: ParB domain protein nuclease YP_004231221.1 PFAM: initiator RepB protein; KEGG: bxe:Bxe_B3026 putative replication protein YP_004231222.1 PFAM: KfrA, N-terminal DNA-binding domain; KEGG: bgf:BC1003_4762 hypothetical protein YP_004231223.1 PFAM: integrase family protein; KEGG: bgf:BC1003_4761 integrase family protein YP_004231224.1 PFAM: Protein of unknown function DUF2471; KEGG: bgf:BC1003_4760 hypothetical protein YP_004231225.1 KEGG: bpy:Bphyt_7005 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004231226.1 TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: bgf:BC1003_4758 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II YP_004231227.1 KEGG: bgf:BC1003_4757 L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_004231228.1 KEGG: bgf:BC1003_4756 YceI family protein; PFAM: YceI family protein; SMART: YceI family protein YP_004231229.1 PFAM: regulatory protein TetR; KEGG: bgf:BC1003_4755 regulatory protein TetR YP_004231230.1 PFAM: protein of unknown function DUF1348; KEGG: bpy:Bphyt_7000 protein of unknown function DUF1348 YP_004231231.1 KEGG: bgf:BC1003_4753 hypothetical protein YP_004231232.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE3 domain protein; KEGG: bgf:BC1003_4715 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004231233.1 manually curated; PFAM: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: bgf:BC1003_4707 CheA signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; Hpt domain protein; PAC repeat-containing protein YP_004231234.1 PFAM: chemotaxis sensory transducer; KEGG: bgf:BC1003_4706 chemotaxis sensory transducer YP_004231235.1 KEGG: bgf:BC1003_4705 hypothetical protein YP_004231236.1 KEGG: bgf:BC1003_4704 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004231237.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4703 short-chain dehydrogenase/reductase SDR YP_004231238.1 KEGG: bgf:BC1003_4702 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004231239.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4700 LysR family transcriptional regulator YP_004231240.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bgf:BC1003_4699 L-carnitine dehydratase/bile acid-inducible protein F YP_004231241.1 PFAM: pyruvate carboxyltransferase; KEGG: bgf:BC1003_4698 pyruvate carboxyltransferase YP_004231242.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4697 major facilitator superfamily protein YP_004231243.1 KEGG: bxe:Bxe_A1964 hypothetical protein YP_004231244.1 KEGG: set:SEN0278 conserved hypothetical pathogenicity island protein YP_004231245.1 KEGG: bgf:BC1003_4694 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH YP_004231246.1 PFAM: aminotransferase class V; KEGG: bgf:BC1003_4693 class I/II aminotransclass V aminotransferase YP_004231247.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4692 major facilitator superfamily protein YP_004231248.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bgf:BC1003_4691 hydratase/decarboxylase YP_004231249.1 KEGG: bgf:BC1003_4690 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein YP_004231250.1 KEGG: bgf:BC1003_4689 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004231251.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_4688 hypothetical protein YP_004231252.1 KEGG: bpy:Bphyt_6950 hypothetical protein YP_004231253.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_4686 lysine exporter protein LysE/YggA YP_004231254.1 PFAM: protein of unknown function DUF1006; KEGG: bxe:Bxe_B2989 hypothetical protein YP_004231255.1 KEGG: bgf:BC1003_4684 hypothetical protein YP_004231256.1 KEGG: bgf:BC1003_4683 cyclic nucleotide-binding protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004231257.1 KEGG: bgf:BC1003_4682 rhodanese domain-containing protein; PFAM: SNARE associated Golgi protein; Rhodanese domain protein; SMART: Rhodanese domain protein YP_004231258.1 KEGG: bgf:BC1003_4681 hypothetical protein YP_004231259.1 PFAM: DinB family protein; KEGG: bgf:BC1003_4680 DinB family protein YP_004231260.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; KEGG: bgf:BC1003_4679 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein YP_004231261.1 KEGG: bgf:BC1003_4678 integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_004231262.1 PFAM: Endoribonuclease L-PSP; KEGG: bgf:BC1003_4677 endoribonuclease L-PSP YP_004231263.1 PFAM: Citrate transporter; KEGG: bgf:BC1003_4676 citrate transporter YP_004231264.1 KEGG: bgf:BC1003_4675 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold-4 domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein YP_004231265.1 KEGG: bgf:BC1003_4674 hypothetical protein YP_004231267.1 KEGG: bgf:BC1003_4673 hypothetical protein YP_004231268.1 PFAM: beta-lactamase; KEGG: bgf:BC1003_4672 beta-lactamase YP_004231269.1 KEGG: bgf:BC1003_4671 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004231270.1 KEGG: bgf:BC1003_4670 formaldehyde-activating enzyme; TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae) YP_004231271.1 PFAM: aldo/keto reductase; KEGG: bgf:BC1003_4669 aldo/keto reductase YP_004231272.1 KEGG: bgf:BC1003_4668 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004231273.1 KEGG: bgf:BC1003_4667 major facilitator superfamily protein YP_004231274.1 KEGG: bgf:BC1003_4666 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004231275.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4665 LysR family transcriptional regulator YP_004231276.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: bgf:BC1003_4664 GCN5-related N-acetyltransferase YP_004231277.1 KEGG: bgf:BC1003_4663 hypothetical protein YP_004231278.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; KEGG: bgf:BC1003_4662 IclR family transcriptional regulator YP_004231279.1 PFAM: SAF domain protein; KEGG: bgf:BC1003_4660 SAF domain-containing protein YP_004231280.1 KEGG: bgf:BC1003_4659 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein YP_004231281.1 KEGG: bgf:BC1003_4658 pyridoxal 4-dehydrogenase; PFAM: aldo/keto reductase YP_004231282.1 PFAM: amidohydrolase 2; KEGG: bgf:BC1003_4657 amidohydrolase 2 YP_004231283.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4656 short-chain dehydrogenase/reductase SDR YP_004231284.1 KEGG: bgf:BC1003_4655 ureidoglycolate lyase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004231285.1 PFAM: thioesterase superfamily protein; KEGG: bgf:BC1003_4654 thioesterase superfamily protein YP_004231286.1 KEGG: bgf:BC1003_4653 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_004231287.1 KEGG: bgf:BC1003_4652 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004231288.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bgf:BC1003_4651 N-acylglucosamine 2-epimerase YP_004231289.1 KEGG: bgf:BC1003_4649 hypothetical protein YP_004231290.1 KEGG: bgf:BC1003_4647 hypothetical protein YP_004231291.1 KEGG: bgf:BC1003_4646 hypothetical protein YP_004231292.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: bgf:BC1003_4645 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein YP_004231293.1 KEGG: bgf:BC1003_4644 flavin reductase domain-containing protein FMN-binding protein; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_004231294.1 KEGG: bgf:BC1003_4643 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004231295.1 manually curated; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: bgf:BC1003_4642 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004231296.1 KEGG: bgf:BC1003_4641 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214 YP_004231297.1 KEGG: bgf:BC1003_4640 AsmA family protein; manually curated; PFAM: AsmA family protein YP_004231298.1 KEGG: bgf:BC1003_4639 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004231299.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: bgf:BC1003_4638 spermidine/putrescine ABC transporter ATPase subunit; SMART: AAA ATPase YP_004231300.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4636 binding-protein-dependent transport systems inner membrane component YP_004231301.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4635 binding-protein-dependent transport systems inner membrane component YP_004231302.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_4634 OmpA/MotB domain-containing protein YP_004231303.1 KEGG: bgf:BC1003_4633 LuxR family two component transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004231304.1 PFAM: Hpt domain protein; KEGG: bgf:BC1003_4632 Hpt domain-containing protein YP_004231305.1 PFAM: Lytic transglycosylase catalytic; KEGG: bgf:BC1003_4631 lytic transglycosylase catalytic YP_004231306.1 PFAM: TadE family protein; KEGG: bgf:BC1003_4630 TadE family protein YP_004231307.1 PFAM: protein of unknown function DUF192; KEGG: bgf:BC1003_4629 hypothetical protein YP_004231308.1 PFAM: Type II secretion system F domain; KEGG: bgf:BC1003_4628 type II secretion system F domain-containing protein YP_004231309.1 PFAM: Type II secretion system F domain; KEGG: bgf:BC1003_4627 type II secretion system F domain-containing protein YP_004231310.1 KEGG: bgf:BC1003_4626 FHA domain containing protein; PFAM: type II secretion system protein E; Forkhead-associated protein; SMART: Forkhead-associated protein YP_004231311.1 PFAM: type II and III secretion system protein; KEGG: bgf:BC1003_4625 type II and III secretion system protein YP_004231312.1 KEGG: bgf:BC1003_4624 Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; SMART: SAF domain protein YP_004231313.1 KEGG: bgf:BC1003_4623 hypothetical protein YP_004231314.1 KEGG: bgf:BC1003_4622 hypothetical protein YP_004231315.1 KEGG: bgf:BC1003_4621 hypothetical protein YP_004231316.1 KEGG: bgf:BC1003_4620 hypothetical protein YP_004231317.1 KEGG: bgf:BC1003_4619 hypothetical protein YP_004231318.1 PFAM: YadA domain-containing protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bgf:BC1003_4618 YadA domain-containing protein YP_004231319.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_4617 OmpA/MotB domain-containing protein YP_004231320.1 KEGG: bgf:BC1003_4616 LuxR family two component transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004231321.1 KEGG: bgf:BC1003_4614 hypothetical protein YP_004231322.1 KEGG: bgf:BC1003_4613 aconitate hydratase 1; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein YP_004231323.1 TIGRFAM: 2-methylcitrate dehydratase; KEGG: bgf:BC1003_4612 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein YP_004231324.1 KEGG: bgf:BC1003_4611 hypothetical protein YP_004231325.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: bgf:BC1003_4610 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase YP_004231326.1 PFAM: HpcH/HpaI aldolase; KEGG: bpy:Bphyt_6859 HpcH/HpaI aldolase YP_004231327.1 KEGG: bgf:BC1003_4608 malate dehydrogenase; TIGRFAM: malate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_004231328.1 KEGG: bgf:BC1003_4607 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH YP_004231329.1 KEGG: bgf:BC1003_4606 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_004231330.1 KEGG: bgf:BC1003_4605 succinate dehydrogenase, hydrophobic membrane anchor protein; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit YP_004231331.1 KEGG: bgf:BC1003_4604 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004231332.1 KEGG: bgf:BC1003_4603 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004231333.1 PFAM: protein of unknown function DUF339; KEGG: bgf:BC1003_4602 hypothetical protein YP_004231334.1 KEGG: bgf:BC1003_4601 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_004231335.1 SMART: Helix-turn-helix, AraC domain; KEGG: bgf:BC1003_4600 AraC family transcriptional regulator YP_004231336.1 PFAM: protein of unknown function DUF1479; KEGG: bgf:BC1003_4599 hypothetical protein YP_004231337.1 PFAM: Transglycosylase-associated protein; KEGG: bgf:BC1003_4598 transglycosylase-associated protein YP_004231338.1 KEGG: bgf:BC1003_4597 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein YP_004231339.1 PFAM: Entericidin EcnAB; KEGG: bgf:BC1003_4596 entericidin EcnAB YP_004231340.1 KEGG: bgf:BC1003_4595 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_004231341.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: bxe:Bxe_B2887 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004231342.1 SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: bgf:BC1003_4593 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_004231343.1 TIGRFAM: FimV C-terminal domain; KEGG: bgf:BC1003_4592 FimV C-terminal domain-containing protein YP_004231344.1 KEGG: bgf:BC1003_4591 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_004231345.1 KEGG: bgf:BC1003_4590 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_004231346.1 KEGG: bgf:BC1003_4589 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004231347.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bgf:BC1003_4588 DNA methylase N-4/N-6 domain-containing protein YP_004231348.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: bgf:BC1003_4587 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain YP_004231349.1 KEGG: bgf:BC1003_4586 acetyl-CoA carboxylase, carboxyl transferase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase YP_004231350.1 TIGRFAM: FolC bifunctional protein; KEGG: bgf:BC1003_4585 FolC bifunctional protein; PFAM: Mur ligase middle domain protein YP_004231351.1 PFAM: Sporulation domain-containing protein; KEGG: bgf:BC1003_4584 sporulation domain-containing protein YP_004231352.1 PFAM: Colicin V production protein; KEGG: bgf:BC1003_4583 colicin V production protein YP_004231353.1 KEGG: bgf:BC1003_4582 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: phosphoribosyltransferase; glutamine amidotransferase class-II YP_004231354.1 KEGG: bgf:BC1003_4581 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_004231355.1 KEGG: bpy:Bphyt_6832 peptidylprolyl isomerase FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type YP_004231357.1 KEGG: bgf:BC1003_4579 histidine kinase; PFAM: histidine kinase A domain protein; SMART: histidine kinase A domain protein YP_004231358.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bgf:BC1003_4578 hypothetical protein YP_004231359.1 KEGG: bgf:BC1003_4577 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region YP_004231360.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: bgf:BC1003_4576 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_004231361.1 KEGG: bgf:BC1003_4575 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein YP_004231362.1 KEGG: bgf:BC1003_4574 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region YP_004231363.1 KEGG: bgf:BC1003_4573 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase all-beta; alpha amylase catalytic region YP_004231364.1 TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; KEGG: bgf:BC1003_4572 trehalose synthase; SMART: alpha amylase catalytic sub domain YP_004231365.1 PFAM: Protein of unknown function DUF3416; alpha amylase catalytic region; KEGG: bgf:BC1003_4571 alpha amylase catalytic region YP_004231366.1 PFAM: protein of unknown function DUF1345; KEGG: bgf:BC1003_4570 hypothetical protein YP_004231367.1 PFAM: metallophosphoesterase; KEGG: bgf:BC1003_4569 metallophosphoesterase YP_004231368.1 PFAM: RES domain protein; KEGG: bgf:BC1003_4568 RES domain-containing protein YP_004231369.1 KEGG: bgf:BC1003_4567 hypothetical protein YP_004231370.1 KEGG: bgf:BC1003_4566 hypothetical protein YP_004231371.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4565 LysR family transcriptional regulator YP_004231372.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bgf:BC1003_4564 4-oxalocrotonate tautomerase YP_004231373.1 PFAM: TOBE domain-containing protein; regulatory protein LysR; KEGG: bgf:BC1003_4563 putative transcriptional regulator, ModE family YP_004231374.1 KEGG: bgf:BC1003_4562 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004231375.1 KEGG: bgf:BC1003_4561 molybdate ABC transporter inner membrane subunit; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004231376.1 KEGG: bgf:BC1003_4560 molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004231377.1 KEGG: bgf:BC1003_4559 phosphoesterase PA-phosphatase related protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004231378.1 TIGRFAM: esterase, PHB depolymerase family; KEGG: bgf:BC1003_4558 esterase, PHB depolymerase family YP_004231379.1 PFAM: Protein of unknown function DUF3563; KEGG: bgf:BC1003_4557 hypothetical protein YP_004231380.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: bgf:BC1003_4556 deoxyribodipyrimidine photo-lyase YP_004231381.1 KEGG: bgf:BC1003_4555 putative transmembrane protein YP_004231382.1 TIGRFAM: homoserine kinase; KEGG: bgf:BC1003_4554 homoserine kinase; PFAM: aminoglycoside phosphotransferase YP_004231383.1 KEGG: bgf:BC1003_4553 hypothetical protein YP_004231384.1 TIGRFAM: AMP nucleosidase; KEGG: bgf:BC1003_4552 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1 YP_004231385.1 PFAM: Chromate transporter; KEGG: bgf:BC1003_4551 chromate transporter YP_004231386.1 PFAM: Chromate transporter; KEGG: bgf:BC1003_4550 chromate transporter YP_004231387.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4549 LysR family transcriptional regulator YP_004231388.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: bgf:BC1003_4548 hypothetical protein YP_004231389.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: bgf:BC1003_4547 DNA polymerase I; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2 YP_004231390.1 KEGG: bgf:BC1003_4546 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004231391.1 KEGG: bgf:BC1003_4545 carboxymethylenebutenolidase YP_004231392.1 KEGG: bgf:BC1003_4544 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004231393.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bgf:BC1003_4543 Rieske (2Fe-2S) iron-sulfur domain-containing protein YP_004231394.1 KEGG: bgf:BC1003_4542 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit YP_004231395.1 PFAM: Polyprenyl synthetase; KEGG: bgf:BC1003_4541 polyprenyl synthetase YP_004231396.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; dehydrogenase E1 component; KEGG: bgf:BC1003_4540 deoxyxylulose-5-phosphate synthase; SMART: Transketolase central region YP_004231397.1 KEGG: bpy:Bphyt_6780 putative GTP cyclohydrolase; PFAM: protein of unknown function DUF198 YP_004231398.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: bgf:BC1003_4538 metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_004231399.1 PFAM: HI0933 family protein; KEGG: bgf:BC1003_4537 hypothetical protein YP_004231400.1 KEGG: bgf:BC1003_4536 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_004231401.1 KEGG: bgf:BC1003_4535 hypothetical protein YP_004231402.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; DNA primase, DnaB-helicase binding domain; KEGG: bgf:BC1003_4534 DNA primase; SMART: Toprim sub domain-containing protein; DNA primase DnaG DnaB-binding YP_004231403.1 KEGG: bgf:BC1003_4533 RNA polymerase, sigma 70 subunit, RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2 YP_004231404.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bgf:BC1003_4772 LysR family transcriptional regulator YP_004231405.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: bgf:BC1003_4773 import inner membrane translocase subunit Tim44 YP_004231406.1 KEGG: bph:Bphy_6677 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004231407.1 KEGG: bph:Bphy_6678 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004231408.1 KEGG: bph:Bphy_6679 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004231409.1 KEGG: bph:Bphy_6680 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004231410.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bph:Bphy_6681 IclR family transcriptional regulator YP_004231411.1 KEGG: bgf:BC1003_4774 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase YP_004231412.1 KEGG: bam:Bamb_6101 hypothetical protein YP_004231413.1 KEGG: bgf:BC1003_4501 hypothetical protein YP_004231414.1 PFAM: protein of unknown function DUF1255; KEGG: bgf:BC1003_4500 hypothetical protein YP_004231415.1 KEGG: bgf:BC1003_4499 BNR/Asp-box repeat-containing protein YP_004231416.1 KEGG: bgf:BC1003_4603 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004231417.1 KEGG: bgf:BC1003_4604 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004231418.1 KEGG: bgf:BC1003_4605 succinate dehydrogenase, hydrophobic membrane anchor protein; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit YP_004231419.1 KEGG: bgf:BC1003_4495 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_004231420.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4494 LysR family transcriptional regulator YP_004231421.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein; KEGG: bgf:BC1003_4493 PQQ-dependent dehydrogenase, methanol/ethanol family; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_004231422.1 PFAM: extracellular solute-binding protein family 3; cytochrome c class I; KEGG: bgf:BC1003_4492 cytochrome c class I YP_004231423.1 KEGG: bgf:BC1003_4491 putative coenzyme PQQ synthesis protein D YP_004231424.1 manually curated; TIGRFAM: coenzyme PQQ biosynthesis protein A; KEGG: bgf:BC1003_4490 coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A YP_004231425.1 KEGG: bgf:BC1003_4489 GAF modulated sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004231426.1 PFAM: Protein of unknown function DUF2964; KEGG: bgf:BC1003_4488 hypothetical protein YP_004231427.1 PFAM: Protein of unknown function DUF3564; KEGG: bgf:BC1003_4487 hypothetical protein YP_004231428.1 KEGG: bxe:Bxe_A1842 putative cytochrome c552 YP_004231429.1 KEGG: bgf:BC1003_1364 Crp/Fnr family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004231430.1 KEGG: bgf:BC1003_1365 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004231431.1 KEGG: bgf:BC1003_1366 LuxR family two component transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004231432.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; KEGG: bgf:BC1003_1367 multi-sensor signal transduction histidine kinase; SMART: PAS domain containing protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein YP_004231433.1 PFAM: UspA domain-containing protein; KEGG: bxe:Bxe_A1853 universal stress protein YP_004231434.1 PFAM: UspA domain-containing protein; KEGG: bgf:BC1003_1369 UspA domain-containing protein YP_004231435.1 KEGG: bgf:BC1003_1370 hypothetical protein YP_004231436.1 PFAM: natural resistance-associated macrophage protein; KEGG: bgf:BC1003_1371 natural resistance-associated macrophage protein YP_004231437.1 PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: bgf:BC1003_1372 67 kDa myosin-cross-reactive antigen family protein YP_004231438.1 KEGG: bgf:BC1003_1373 hypothetical protein YP_004231439.1 PFAM: UspA domain-containing protein; KEGG: bgf:BC1003_1374 UspA domain-containing protein YP_004231440.1 PFAM: nitroreductase; KEGG: bgf:BC1003_1376 nitroreductase YP_004231441.1 PFAM: nitroreductase; KEGG: bgf:BC1003_1377 hypothetical protein YP_004231442.1 KEGG: bgf:BC1003_5897 RNA-metabolising metallo-beta-lactamase; PFAM: RNA-metabolising metallo-beta-lactamase; SMART: beta-lactamase domain protein YP_004231443.1 KEGG: bgf:BC1003_5898 hypothetical protein YP_004231444.1 PFAM: heat shock protein Hsp20; KEGG: bgf:BC1003_1378 heat shock protein HSP20 YP_004231445.1 KEGG: bgf:BC1003_1379 transport-associated protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004231446.1 KEGG: bpy:Bphyt_6308 hypothetical protein YP_004231447.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bgf:BC1003_4486 alcohol dehydrogenase GroES domain-containing protein YP_004231448.1 KEGG: bgf:BC1003_4485 putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; transport-associated; SMART: CBS domain containing protein YP_004231449.1 PFAM: UspA domain-containing protein; KEGG: bgf:BC1003_4484 UspA domain-containing protein YP_004231450.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bgf:BC1003_4478 TonB-dependent receptor YP_004231451.1 PFAM: CsbD family protein; KEGG: bph:Bphy_4802 hypothetical protein YP_004231452.1 KEGG: rme:Rmet_1941 hypothetical protein YP_004231453.1 KEGG: dpo:Dpse_GA28529 GA28529 gene product from transcript GA28529-RA YP_004231454.1 KEGG: scb:SCAB_81011 putative IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004231455.1 PFAM: aldo/keto reductase; KEGG: bja:bll5249 oxidoreductase YP_004231456.1 PFAM: aminotransferase class-III; KEGG: bph:Bphy_3858 hypothetical protein YP_004231457.1 PFAM: FAD dependent oxidoreductase; KEGG: bbr:BB3860 hypothetical protein YP_004231458.1 KEGG: bbr:BB0318 putative hydantoin utilization protein A; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein YP_004231459.1 KEGG: bbr:BB0319 hydantoin utilization protein B; PFAM: Hydantoinase B/oxoprolinase YP_004231460.1 PFAM: extracellular solute-binding protein family 5; KEGG: bgf:BC1003_4477 extracellular solute-binding protein family 5 YP_004231461.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_4476 FAD dependent oxidoreductase YP_004231462.1 KEGG: bgf:BC1003_4475 hypothetical protein YP_004231463.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4474 major facilitator superfamily protein YP_004231464.1 KEGG: bgf:BC1003_4473 hypothetical protein YP_004231465.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bgf:BC1003_4472 Asp/Glu/hydantoin racemase YP_004231466.1 PFAM: protein of unknown function DUF917; KEGG: bgf:BC1003_4471 hypothetical protein YP_004231467.1 KEGG: bgf:BC1003_4470 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_004231468.1 KEGG: bgf:BC1003_4469 integral membrane protein-like protein YP_004231469.1 KEGG: bgf:BC1003_4468 hypothetical protein YP_004231470.1 KEGG: bgf:BC1003_4467 hypothetical protein YP_004231471.1 KEGG: bgf:BC1003_4466 putative lipoprotein YP_004231472.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4462 LysR family transcriptional regulator YP_004231473.1 KEGG: bgf:BC1003_4461 hypothetical protein YP_004231474.1 KEGG: bgf:BC1003_4460 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein YP_004231475.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_4459 aldehyde dehydrogenase YP_004231476.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_4458 FAD dependent oxidoreductase YP_004231477.1 PFAM: aminotransferase class I and II; KEGG: bgf:BC1003_4457 putative transcriptional regulator, GntR family YP_004231478.1 KEGG: bpy:Bphyt_6244 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004231479.1 PFAM: dihydrodipicolinate synthetase; KEGG: bpy:Bphyt_6243 dihydrodipicolinate synthetase YP_004231480.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_6242 major facilitator superfamily MFS_1 YP_004231481.1 KEGG: bgf:BC1003_4447 hypothetical protein YP_004231482.1 KEGG: bgf:BC1003_4446 hypothetical protein YP_004231483.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_4444 porin gram-negative type YP_004231484.1 KEGG: bgf:BC1003_4443 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer YP_004231485.1 KEGG: bgf:BC1003_4442 hypothetical protein YP_004231486.1 KEGG: bge:BC1002_2342 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004231487.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_4440 lysine exporter protein LysE/YggA YP_004231488.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bgf:BC1003_4439 hypothetical protein YP_004231489.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bgf:BC1003_4438 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_004231490.1 TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; KEGG: bgf:BC1003_4437 protocatechuate 3,4-dioxygenase subunit alpha; PFAM: intradiol ring-cleavage dioxygenase YP_004231491.1 KEGG: bgf:BC1003_4436 protocatechuate 3,4-dioxygenase subunit beta; TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase YP_004231492.1 KEGG: bgf:BC1003_4435 LysR family transcriptional regulator; TIGRFAM: pca operon transcription factor PcaQ; PFAM: LysR substrate-binding; regulatory protein LysR YP_004231493.1 KEGG: bgf:BC1003_4434 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004231494.1 KEGG: bxe:Bxe_B2769 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004231495.1 KEGG: bpy:Bphyt_6753 hypothetical protein YP_004231496.1 KEGG: bgl:bglu_2g04400 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_004231497.1 PFAM: Polyketide cyclase/dehydrase; KEGG: bpy:Bphyt_4200 hypothetical protein YP_004231498.1 KEGG: bay:RBAM_035140 SpsC YP_004231499.1 KEGG: aav:Aave_3575 sporulation domain-containing protein YP_004231500.1 KEGG: rsl:RPSI07_0136 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004231501.1 KEGG: bgf:BC1003_4431 hypothetical protein YP_004231502.1 KEGG: bxe:Bxe_B2631 hypothetical protein YP_004231503.1 KEGG: bgf:BC1003_4430 hypothetical protein YP_004231504.1 KEGG: bgf:BC1003_4429 aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_004231505.1 KEGG: bgf:BC1003_4428 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004231506.1 TIGRFAM: xylose isomerase; KEGG: bgf:BC1003_4427 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004231507.1 KEGG: bpy:Bphyt_6632 D-xylose ABC transporter, periplasmic substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator YP_004231508.1 TIGRFAM: D-xylose ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bgf:BC1003_4425 D-xylose ABC transporter ATPase subunit; SMART: AAA ATPase YP_004231509.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_4424 inner-membrane translocator YP_004231510.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bgf:BC1003_4423 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein YP_004231511.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: bgf:BC1003_4422 (2Fe-2S)-binding domain-containing protein YP_004231512.1 KEGG: bgf:BC1003_4421 hypothetical protein YP_004231513.1 KEGG: bgf:BC1003_4420 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004231514.1 manually curated; TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bgf:BC1003_4419 efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004231515.1 PFAM: protein of unknown function DUF1656; KEGG: bgf:BC1003_4418 hypothetical protein YP_004231516.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bgf:BC1003_4417 fusaric acid resistance protein conserved region YP_004231517.1 KEGG: bgf:BC1003_4416 regulatory protein MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004231518.1 KEGG: bgf:BC1003_4415 histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_004231519.1 PFAM: Circadian clock protein KaiC central region; KEGG: bgf:BC1003_4414 putative circadian clock protein, KaiC; SMART: AAA ATPase YP_004231520.1 KEGG: bxe:Bxe_B2603 hypothetical protein YP_004231521.1 KEGG: bgf:BC1003_4413 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase YP_004231522.1 KEGG: bgf:BC1003_4412 hypothetical protein YP_004231523.1 KEGG: bgf:BC1003_4411 hypothetical protein YP_004231524.1 PFAM: Protein of unknown function DUF2086; KEGG: bgf:BC1003_4405 hypothetical protein YP_004231525.1 PFAM: Protein of unknown function DUF2138; KEGG: bgf:BC1003_4404 hypothetical protein YP_004231526.1 PFAM: protein of unknown function DUF1175; KEGG: bgf:BC1003_4403 hypothetical protein YP_004231527.1 PFAM: alpha-2-macroglobulin domain protein 2; Alpha-2-macroglobulin, thiol-ester bond-forming; alpha-2-macroglobulin domain protein; KEGG: bgf:BC1003_4402 alpha-2-macroglobulin domain-containing protein YP_004231528.1 PFAM: Protein of unknown function DUF2300, secreted; Stage II sporulation protein D; KEGG: bgf:BC1003_4401 hypothetical protein YP_004231529.1 PFAM: Protein of unknown function DUF2135; KEGG: bgf:BC1003_4400 hypothetical protein YP_004231530.1 PFAM: Protein of unknown function DUF2135; KEGG: bgf:BC1003_4399 hypothetical protein YP_004231531.1 KEGG: bgf:BC1003_4398 hypothetical protein YP_004231532.1 KEGG: bgf:BC1003_4397 RNA polymerase, sigma 70 subunit, RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_004231533.1 manually curated; KEGG: bgf:BC1003_4396 hypothetical protein YP_004231534.1 KEGG: bgf:BC1003_4394 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004231535.1 KEGG: bgf:BC1003_4393 ABC branched chain amino acid family transporter periplasmic ligand-binding protein YP_004231536.1 PFAM: inner-membrane translocator; KEGG: bpy:Bphyt_6573 inner-membrane translocator YP_004231537.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_4391 inner-membrane translocator YP_004231538.1 KEGG: bgf:BC1003_4390 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004231539.1 KEGG: bpy:Bphyt_6570 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004231540.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bgf:BC1003_4388 amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004231541.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: bgf:BC1003_4387 microcystin LR degradation protein MlrC-like protein YP_004231542.1 PFAM: amidohydrolase 2; KEGG: bgf:BC1003_4386 amidohydrolase 2 YP_004231543.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4385 major facilitator superfamily protein YP_004231544.1 KEGG: bgf:BC1003_4384 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH YP_004231545.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4383 major facilitator superfamily protein YP_004231546.1 KEGG: bgf:BC1003_4382 hypothetical protein YP_004231547.1 PFAM: permease; KEGG: bgf:BC1003_4381 permease YP_004231548.1 KEGG: bgf:BC1003_4380 tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein YP_004231549.1 KEGG: bgf:BC1003_4379 selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004231550.1 KEGG: bgf:BC1003_4378 transketolase central region; PFAM: Transketolase central region; Transketolase domain-containing protein; SMART: Transketolase central region YP_004231551.1 PFAM: Transketolase domain-containing protein; KEGG: bgf:BC1003_4377 transketolase domain-containing protein YP_004231552.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4376 major facilitator superfamily protein YP_004231553.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4375 short-chain dehydrogenase/reductase SDR YP_004231554.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4374 LysR family transcriptional regulator YP_004231555.1 KEGG: bgf:BC1003_4373 hypothetical protein YP_004231556.1 KEGG: bgf:BC1003_4372 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004231557.1 PFAM: Protein of unknown function DUF3005; KEGG: bgf:BC1003_4371 hypothetical protein YP_004231558.1 PFAM: Protein of unknown function DUF2134, membrane; TadE family protein; KEGG: bgf:BC1003_4370 hypothetical protein YP_004231559.1 PFAM: TadE family protein; KEGG: bgf:BC1003_4369 TadE family protein YP_004231560.1 PFAM: Type II secretion system F domain; KEGG: bgf:BC1003_4368 type II secretion system F domain-containing protein YP_004231561.1 PFAM: Type II secretion system F domain; KEGG: bgf:BC1003_4367 type II secretion system F domain-containing protein YP_004231562.1 KEGG: bgf:BC1003_4366 type II secretion system protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase YP_004231563.1 KEGG: bgf:BC1003_4365 response regulator receiver protein YP_004231564.1 KEGG: bgf:BC1003_4364 hypothetical protein YP_004231565.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: bgf:BC1003_4363 type II and III secretion system protein YP_004231566.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: bgf:BC1003_4362 Flp pilus assembly protein CpaB; SMART: SAF domain protein YP_004231567.1 SMART: AAA ATPase; KEGG: bgf:BC1003_4361 AAA ATPase YP_004231568.1 PFAM: peptidase A24A prepilin type IV; KEGG: bgf:BC1003_4360 peptidase A24A prepilin type IV YP_004231569.1 PFAM: Flp/Fap pilin component; KEGG: bgf:BC1003_4359 Flp/Fap pilin component YP_004231570.1 PFAM: Flp/Fap pilin component; KEGG: bgf:BC1003_4358 Flp/Fap pilin component YP_004231571.1 KEGG: bgf:BC1003_4357 hypothetical protein YP_004231572.1 KEGG: bgf:BC1003_4348 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004231573.1 KEGG: bxe:Bxe_B2597 hypothetical protein YP_004231574.1 KEGG: bgf:BC1003_4347 hypothetical protein YP_004231575.1 KEGG: bgf:BC1003_4346 hypothetical protein YP_004231576.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4345 major facilitator superfamily protein YP_004231577.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bgf:BC1003_4343 succinylglutamate desuccinylase/aspartoacylase YP_004231578.1 TIGRFAM: tartrate dehydrogenase; KEGG: bgf:BC1003_4342 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004231579.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4341 LysR family transcriptional regulator YP_004231580.1 KEGG: bgf:BC1003_4340 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004231581.1 PFAM: aminotransferase class-III; KEGG: bgf:BC1003_4339 aminotransferase class-III YP_004231582.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bgf:BC1003_4338 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004231583.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_4337 GCN5-related N-acetyltransferase YP_004231584.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_4336 aldehyde dehydrogenase YP_004231585.1 KEGG: bgf:BC1003_4335 haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_004231586.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_4334 FAD dependent oxidoreductase YP_004231587.1 PFAM: extracellular solute-binding protein family 5; KEGG: bgf:BC1003_4333 extracellular solute-binding protein family 5 YP_004231588.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4332 binding-protein-dependent transport systems inner membrane component YP_004231589.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4331 binding-protein-dependent transport systems inner membrane component YP_004231590.1 KEGG: bgf:BC1003_4330 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004231591.1 KEGG: bgf:BC1003_4329 putative NAD(FAD)-dependent dehydrogenase YP_004231592.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bgf:BC1003_4328 BFD domain-containing protein (2Fe-2S)-binding domain-containing protein YP_004231593.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_4327 FAD dependent oxidoreductase YP_004231594.1 KEGG: bgf:BC1003_4326 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004231595.1 TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain-containing protein; PAS fold-4 domain protein; helix-turn-helix Fis-type; KEGG: bgf:BC1003_4325 proprionate catabolism activator, fis family; SMART: AAA ATPase; PAS domain containing protein YP_004231596.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: bpy:Bphyt_6081 methylcitrate synthase; PFAM: Citrate synthase YP_004231597.1 KEGG: bgf:BC1003_4323 2-methylisocitrate dehydratase, Fe/S-dependent; TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; PFAM: aconitate hydratase domain-containing protein YP_004231598.1 KEGG: bgf:BC1003_4322 AcnD-accessory protein PrpF; TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453 YP_004231599.1 KEGG: bgf:BC1003_4321 hypothetical protein YP_004231600.1 PFAM: protein of unknown function DUF305; KEGG: bgf:BC1003_4320 hypothetical protein YP_004231601.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bgf:BC1003_4319 heavy metal transport/detoxification protein YP_004231602.1 KEGG: bgf:BC1003_4318 glycosyl transferase family 9; PFAM: glycosyl transferase family 9; SMART: Tetratricopeptide repeat YP_004231603.1 KEGG: bpy:Bphyt_6067 hypothetical protein YP_004231604.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bgf:BC1003_4317 alcohol dehydrogenase zinc-binding domain-containing protein YP_004231605.1 PFAM: ABC transporter related; KEGG: bgf:BC1003_4316 ABC transporter-like protein YP_004231606.1 KEGG: bgf:BC1003_4315 AAA ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase YP_004231607.1 KEGG: bgf:BC1003_4314 hypothetical protein YP_004231608.1 PFAM: acyltransferase 3; KEGG: bgf:BC1003_4313 acyltransferase 3 YP_004231609.1 PFAM: Uncharacterised conserved protein UCP028704, OpgC; KEGG: bgf:BC1003_4312 hypothetical protein YP_004231610.1 PFAM: Tannase and feruloyl esterase; KEGG: bgf:BC1003_4311 tannase and feruloyl esterase YP_004231611.1 KEGG: bgf:BC1003_4310 hypothetical protein YP_004231612.1 KEGG: bgf:BC1003_4309 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004231613.1 PFAM: ABC-2 type transporter; KEGG: bgf:BC1003_4308 ABC-2 type transporter YP_004231614.1 KEGG: bgf:BC1003_4307 regulatory protein LuxR; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_004231615.1 KEGG: bgf:BC1003_4306 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004231616.1 KEGG: bgf:BC1003_4305 hypothetical protein YP_004231617.1 PFAM: YadA domain-containing protein; Hep_Hag repeat-containing protein; KEGG: bgf:BC1003_4304 YadA domain-containing protein YP_004231618.1 KEGG: bge:BC1002_3369 hypothetical protein YP_004231619.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B2270 major facilitator superfamily (MFS)oxalate/formate antiporter YP_004231620.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: bgf:BC1003_4303 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_004231621.1 KEGG: bgf:BC1003_4302 hypothetical protein YP_004231622.1 KEGG: bgf:BC1003_4301 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH YP_004231623.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: bgf:BC1003_4300 thiamine pyrophosphate TPP-binding domain-containing protein YP_004231624.1 KEGG: bgf:BC1003_4299 formyl-CoA transferase; TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_004231625.1 KEGG: bgf:BC1003_4298 CoA-binding domain-containing protein; PFAM: CoA-binding domain protein; SMART: CoA-binding domain protein YP_004231626.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bgf:BC1003_4297 fumarylacetoacetate (FAA) hydrolase YP_004231627.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: bgf:BC1003_4296 NAD(P) transhydrogenase subunit beta YP_004231628.1 KEGG: bgf:BC1003_4295 hypothetical protein YP_004231629.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4294 LysR family transcriptional regulator YP_004231630.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4293 major facilitator superfamily protein YP_004231631.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4292 LysR family transcriptional regulator YP_004231632.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_4291 aldehyde dehydrogenase YP_004231633.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bgf:BC1003_4290 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004231634.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_4289 lysine exporter protein LysE/YggA YP_004231635.1 KEGG: bgf:BC1003_4288 hypothetical protein YP_004231636.1 PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: bgf:BC1003_4287 hypothetical protein YP_004231637.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_4286 lysine exporter protein LysE/YggA YP_004231638.1 KEGG: bpy:Bphyt_6007 hypothetical protein YP_004231639.1 PFAM: DSBA oxidoreductase; KEGG: bgf:BC1003_4285 DsbA oxidoreductase YP_004231640.1 PFAM: Protein of unknown function DUF2866; KEGG: bgf:BC1003_4284 hypothetical protein YP_004231641.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bgf:BC1003_4283 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004231642.1 KEGG: bgf:BC1003_4282 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004231643.1 KEGG: bgf:BC1003_4281 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004231644.1 TIGRFAM: phosphoenolpyruvate phosphomutase; KEGG: bgf:BC1003_4280 phosphoenolpyruvate phosphomutase YP_004231645.1 KEGG: bgf:BC1003_4279 phosphonopyruvate decarboxylase; TIGRFAM: phosphonopyruvate decarboxylase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein YP_004231646.1 KEGG: bpy:Bphyt_5997 2-aminoethylphosphonate aminotransferase; TIGRFAM: 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V YP_004231647.1 KEGG: bgf:BC1003_4277 hypothetical protein YP_004231648.1 PFAM: LmbE family protein; KEGG: bgf:BC1003_4276 LmbE family protein YP_004231649.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: bxe:Bxe_B2228 hypothetical protein YP_004231650.1 KEGG: bgf:BC1003_4275 hypothetical protein YP_004231651.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bgf:BC1003_4274 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein YP_004231652.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bgf:BC1003_4273 molybdopterin dehydrogenase FAD-binding protein YP_004231653.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: bgf:BC1003_4272 (2Fe-2S)-binding domain-containing protein YP_004231654.1 KEGG: bgf:BC1003_4271 hydroxybutyrate-dimer hydrolase; PFAM: D-(-)-3-hydroxybutyrate oligomer hydrolase, putative YP_004231655.1 KEGG: bgf:BC1003_4270 hypothetical protein YP_004231656.1 KEGG: bgf:BC1003_4269 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_004231657.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_4268 OmpA/MotB domain-containing protein YP_004231658.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bgf:BC1003_4267 flagellar motor component-like protein YP_004231659.1 PFAM: Protein of unknown function DUF2252; KEGG: bgf:BC1003_4266 hypothetical protein YP_004231660.1 PFAM: polysaccharide deacetylase; KEGG: bgf:BC1003_4265 polysaccharide deacetylase YP_004231661.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4264 short-chain dehydrogenase/reductase SDR YP_004231662.1 KEGG: bge:BC1002_3420 hypothetical protein YP_004231663.1 PFAM: Silent information regulator protein Sir2; KEGG: bgf:BC1003_4263 silent information regulator protein Sir2 YP_004231664.1 PFAM: protein of unknown function DUF938; KEGG: bgf:BC1003_4262 hypothetical protein YP_004231665.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: bgf:BC1003_4261 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein; 6-phosphogluconate dehydrogenase NAD-binding YP_004231666.1 KEGG: bgf:BC1003_4260 hypothetical protein YP_004231667.1 KEGG: bgf:BC1003_4259 hypothetical protein YP_004231668.1 KEGG: bgf:BC1003_4258 hypothetical protein YP_004231669.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bgf:BC1003_4257 cupin 2 conserved barrel domain-containing protein YP_004231670.1 KEGG: bgf:BC1003_4256 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004231671.1 KEGG: bgf:BC1003_4255 threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004231672.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4254 major facilitator superfamily protein YP_004231673.1 KEGG: bgf:BC1003_4253 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_004231674.1 KEGG: bgf:BC1003_4252 hypothetical protein YP_004231675.1 KEGG: bgf:BC1003_4251 hypothetical protein YP_004231676.1 KEGG: bgf:BC1003_4177 hypothetical protein YP_004231677.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_5636 LysR family transcriptional regulator YP_004231678.1 PFAM: sodium:dicarboxylate symporter; KEGG: bph:Bphy_5637 sodium:dicarboxylate symporter YP_004231679.1 KEGG: bph:Bphy_5638 aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004231680.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bgf:BC1003_4176 LysR family transcriptional regulator YP_004231681.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: bgf:BC1003_4175 spermidine/putrescine ABC transporter ATPase subunit; SMART: AAA ATPase YP_004231682.1 KEGG: bgf:BC1003_4174 HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_004231683.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_4173 FAD dependent oxidoreductase YP_004231684.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4172 binding-protein-dependent transport systems inner membrane component YP_004231685.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bgf:BC1003_4171 binding-protein-dependent transport systems inner membrane component YP_004231686.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_4170 aldehyde dehydrogenase YP_004231687.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bgf:BC1003_4169 glucose-methanol-choline oxidoreductase YP_004231688.1 PFAM: extracellular solute-binding protein family 1; KEGG: bgf:BC1003_4168 extracellular solute-binding protein family 1 YP_004231689.1 KEGG: bge:BC1002_6148 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004231690.1 PFAM: blue (type 1) copper domain protein; KEGG: bge:BC1002_6149 blue (type 1) copper domain protein YP_004231691.1 KEGG: bge:BC1002_6150 hypothetical protein YP_004231692.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4167 major facilitator superfamily protein YP_004231693.1 TIGRFAM: tartrate dehydrogenase; KEGG: bgf:BC1003_4166 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004231694.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4165 LysR family transcriptional regulator YP_004231695.1 KEGG: bxe:Bxe_B0810 hypothetical protein YP_004231696.1 PFAM: O-methyltransferase family 2; KEGG: bgf:BC1003_4162 O-methyltransferase family 2 YP_004231697.1 KEGG: bxe:Bxe_A3457 putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004231698.1 KEGG: bpy:Bphyt_2190 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004231699.1 KEGG: bpd:BURPS668_A2514 hypothetical protein YP_004231700.1 PFAM: protein of unknown function DUF347; KEGG: bxe:Bxe_A3455 hypothetical protein YP_004231701.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_4161 porin gram-negative type YP_004231702.1 KEGG: bgf:BC1003_4160 lipoprotein, YaeC family; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004231703.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: bgf:BC1003_4159 succinylglutamate desuccinylase/aspartoacylase YP_004231704.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bgf:BC1003_4158 cationic amino acid ABC transporter periplasmic-binding protein; SMART: extracellular solute-binding protein family 3 YP_004231705.1 KEGG: bgf:BC1003_4157 extracellular solute-binding protein family 1; manually curated; PFAM: extracellular solute-binding protein family 1 YP_004231706.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Cache domain protein; histidine kinase HAMP region domain protein; KEGG: bgf:BC1003_4156 diguanylate cyclase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein YP_004231707.1 KEGG: bgf:BC1003_4155 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region YP_004231708.1 TIGRFAM: amidohydrolase; KEGG: bgf:BC1003_4154 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004231709.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; KEGG: bgf:BC1003_4153 IclR family transcriptional regulator; SMART: regulatory protein IclR YP_004231710.1 KEGG: bpy:Bphyt_5932 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR domain protein YP_004231711.1 KEGG: bgf:BC1003_4151 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004231712.1 PFAM: type III effector Hrp-dependent outers; KEGG: bgf:BC1003_4150 type III effector Hrp-dependent outers domain-containing protein YP_004231713.1 PFAM: class II aldolase/adducin family protein; KEGG: bgf:BC1003_4149 class II aldolase/adducin family protein YP_004231714.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4148 major facilitator superfamily protein YP_004231715.1 KEGG: bgf:BC1003_4147 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004231716.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_4146 NAD-dependent epimerase/dehydratase YP_004231717.1 TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; KEGG: bgf:BC1003_4145 beta-ketoadipyl CoA thiolase; PFAM: Thiolase-like YP_004231718.1 PFAM: Protein of unknown function DUF2917; KEGG: bgf:BC1003_4143 hypothetical protein YP_004231719.1 KEGG: bgf:BC1003_4142 hypothetical protein YP_004231720.1 KEGG: bgf:BC1003_4140 hypothetical protein YP_004231721.1 KEGG: bgf:BC1003_4139 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004231722.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_5912 transcriptional regulator, LysR family YP_004231723.1 PFAM: aldo/keto reductase; KEGG: bgf:BC1003_4137 aldo/keto reductase YP_004231724.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4135 LysR family transcriptional regulator YP_004231725.1 KEGG: bgf:BC1003_4134 NAD(P)H dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone) YP_004231726.1 PFAM: esterase; KEGG: bxe:Bxe_B2109 putative esterase YP_004231727.1 TIGRFAM: aspartate carbamoyltransferase; KEGG: bgf:BC1003_4133 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_004231728.1 KEGG: bgf:BC1003_4132 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004231729.1 PFAM: Peptidase M23; KEGG: bpy:Bphyt_5898 peptidase M23 YP_004231730.1 KEGG: bpy:Bphyt_5897 hypothetical protein YP_004231731.1 PFAM: protein of unknown function DUF583; KEGG: bxe:Bxe_B2104 hypothetical protein YP_004231732.1 KEGG: bgf:BC1003_4131 hypothetical protein YP_004231733.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; KEGG: bgf:BC1003_4130 diguanylate cyclase/phosphodiesterase with MHYT sensor; SMART: EAL domain protein; GGDEF domain containing protein YP_004231734.1 PFAM: protein of unknown function zinc metallopeptidase; KEGG: bgf:BC1003_4128 hypothetical protein YP_004231735.1 KEGG: bgf:BC1003_4127 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004231736.1 KEGG: bgf:BC1003_4126 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004231737.1 PFAM: Protein of unknown function DUF2252; KEGG: bgf:BC1003_4125 hypothetical protein YP_004231738.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bgf:BC1003_4124 sulphate transporter YP_004231739.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_4123 lysine exporter protein LysE/YggA YP_004231740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_4122 LysR family transcriptional regulator YP_004231741.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bgf:BC1003_4121 glyoxalase/bleomycin resistance protein/dioxygenase YP_004231742.1 PFAM: acriflavin resistance protein; KEGG: bgf:BC1003_4120 acriflavin resistance protein YP_004231743.1 KEGG: bgf:BC1003_4119 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004231744.1 KEGG: bgf:BC1003_4118 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004231745.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: bgf:BC1003_4117 winged helix family two component transcriptional regulator; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004231746.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bgf:BC1003_4116 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004231747.1 KEGG: bgf:BC1003_4115 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_004231748.1 KEGG: bgf:BC1003_4114 hypothetical protein YP_004231749.1 PFAM: YceI family protein; KEGG: bgf:BC1003_4112 YceI family protein YP_004231750.1 KEGG: bgf:BC1003_4111 YceI family protein; PFAM: YceI family protein; SMART: YceI family protein YP_004231751.1 PFAM: Citrate transporter; KEGG: bgf:BC1003_4110 citrate transporter YP_004231752.1 PFAM: formate/nitrite transporter; KEGG: bgf:BC1003_4109 formate/nitrite transporter YP_004231753.1 KEGG: bgf:BC1003_4108 hypothetical protein YP_004231754.1 KEGG: bgf:BC1003_4107 hypothetical protein YP_004231755.1 KEGG: bgf:BC1003_4106 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004231756.1 KEGG: bgf:BC1003_4105 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004231757.1 KEGG: bgf:BC1003_4104 transporter hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004231758.1 KEGG: bgf:BC1003_4103 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004231759.1 KEGG: bgf:BC1003_4102 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_004231760.1 KEGG: bgf:BC1003_4101 hypothetical protein YP_004231761.1 SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; response regulator receiver; manually curated; KEGG: bgf:BC1003_4100 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; response regulator receiver YP_004231762.1 PFAM: Protein of unknown function DUF2252; KEGG: bpy:Bphyt_5840 hypothetical protein YP_004231763.1 KEGG: bgf:BC1003_4099 cellulose synthase operon C domain-containing protein; PFAM: cellulose synthase operon C domain protein; SMART: Tetratricopeptide repeat YP_004231764.1 KEGG: bgf:BC1003_4098 cellulase; PFAM: glycoside hydrolase family 8 YP_004231765.1 PFAM: Cellulose synthase BcsB; KEGG: bgf:BC1003_4097 cellulose synthase BcsB YP_004231766.1 KEGG: bgf:BC1003_4096 cellulose synthase catalytic subunit (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_004231767.1 KEGG: bgf:BC1003_4095 cellulose synthase operon protein YhjQ; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cellulose synthase operon protein YhjQ YP_004231768.1 KEGG: bgf:BC1003_4094 hypothetical protein YP_004231769.1 KEGG: bgf:BC1003_4093 hypothetical protein YP_004231770.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bgf:BC1003_4092 diguanylate cyclase/phosphodiesterase; SMART: GGDEF domain containing protein; EAL domain protein YP_004231771.1 TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: bgf:BC1003_4091 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase YP_004231772.1 TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: bgf:BC1003_4090 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004231773.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bgf:BC1003_4089 5-carboxymethyl-2-hydroxymuconate isomerase YP_004231774.1 TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; KEGG: bgf:BC1003_4088 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B YP_004231775.1 KEGG: bpy:Bphyt_5826 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004231776.1 KEGG: bgf:BC1003_4086 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004231777.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bgf:BC1003_4085 fumarylacetoacetate (FAA) hydrolase YP_004231778.1 TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bgf:BC1003_4084 homoprotocatechuate degradation operon regulator, HpaR; SMART: regulatory protein MarR YP_004231779.1 KEGG: bgf:BC1003_4083 hypothetical protein YP_004231780.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4082 major facilitator superfamily protein YP_004231781.1 KEGG: bgf:BC1003_4081 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004231782.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4080 major facilitator superfamily protein YP_004231783.1 PFAM: isochorismatase hydrolase; KEGG: bgf:BC1003_4079 isochorismatase hydrolase YP_004231784.1 KEGG: bgf:BC1003_4078 regulatory protein MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004231785.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bgf:BC1003_4077 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_004231786.1 KEGG: bgf:BC1003_4076 putative transmembrane protein YP_004231787.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bgf:BC1003_4075 TonB-dependent receptor plug YP_004231788.1 KEGG: bgf:BC1003_4074 hypothetical protein YP_004231789.1 KEGG: bgf:BC1003_4073 CsbD family protein YP_004231790.1 KEGG: bgf:BC1003_4072 hypothetical protein YP_004231791.1 KEGG: bgf:BC1003_4071 hypothetical protein YP_004231792.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bgf:BC1003_4070 alcohol dehydrogenase GroES domain-containing protein YP_004231793.1 KEGG: bgf:BC1003_4069 hypothetical protein YP_004231794.1 KEGG: bgf:BC1003_4068 hypothetical protein YP_004231795.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: bgf:BC1003_4067 ATP-dependent DNA helicase, RecQ family; SMART: DEAD-like helicase ; helicase domain protein YP_004231796.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_4066 NAD-dependent epimerase/dehydratase YP_004231797.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_4065 glycosyl transferase group 1 YP_004231798.1 PFAM: glycosyl transferase family 9; KEGG: bgf:BC1003_4064 glycosyl transferase family 9 YP_004231799.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_4063 glycosyl transferase family 2 YP_004231800.1 PFAM: Carbamoyltransferase; KEGG: bgf:BC1003_4062 carbamoyltransferase YP_004231801.1 PFAM: glycosyl transferase family 9; KEGG: bgf:BC1003_4061 glycosyl transferase family 9 YP_004231802.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; KEGG: bgf:BC1003_4060 hydrolase, HAD-superfamily, subfamily IIIA YP_004231803.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_4059 glycosyl transferase group 1 YP_004231804.1 KEGG: bgf:BC1003_4058 response regulator receiver protein; PFAM: ABC transporter related; ABC transporter transmembrane region; response regulator receiver; SMART: response regulator receiver; AAA ATPase YP_004231805.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_4057 glycosyl transferase family 2 YP_004231806.1 PFAM: LmbE family protein; KEGG: bgf:BC1003_4056 LmbE family protein YP_004231807.1 PFAM: NADPH-dependent FMN reductase; KEGG: bgf:BC1003_4055 NADPH-dependent FMN reductase YP_004231808.1 PFAM: Phophatidylserine decarboxylase; phosphatidylserine decarboxylase-related; KEGG: bgf:BC1003_4054 phosphatidylserine decarboxylase-related protein YP_004231809.1 KEGG: bgf:BC1003_4053 catalase; PFAM: manganese containing catalase YP_004231810.1 PFAM: protein of unknown function DUF892; KEGG: bgf:BC1003_4052 hypothetical protein YP_004231811.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: bgf:BC1003_4051 hemerythrin HHE cation-binding domain-containing protein YP_004231812.1 KEGG: bgf:BC1003_4050 hypothetical protein YP_004231813.1 KEGG: bgf:BC1003_4049 hypothetical protein YP_004231814.1 PFAM: NUDIX hydrolase; KEGG: bgf:BC1003_4048 NUDIX hydrolase YP_004231815.1 TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein; KEGG: bgf:BC1003_4047 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_004231816.1 PFAM: Protein of unknown function DUF2474; KEGG: gbe:GbCGDNIH1_0138 hypothetical protein YP_004231817.1 KEGG: bgf:BC1003_4046 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004231818.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bgf:BC1003_4045 cytochrome bd ubiquinol oxidase subunit I YP_004231819.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; KEGG: bgf:BC1003_4044 oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_004231820.1 KEGG: bgf:BC1003_4043 hemerythrin HHE cation-binding domain-containing protein YP_004231821.1 KEGG: bgf:BC1003_4042 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004231822.1 PFAM: CinA domain protein; KEGG: bgf:BC1003_4041 CinA domain-containing protein YP_004231823.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_4040 GCN5-related N-acetyltransferase YP_004231824.1 KEGG: bgf:BC1003_4039 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004231825.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: bgf:BC1003_4038 cytochrome c oxidase caa3-type, assembly factor CtaG-related protein YP_004231826.1 KEGG: bgf:BC1003_4037 hypothetical protein YP_004231827.1 PFAM: cytochrome c oxidase subunit III; KEGG: bgf:BC1003_4036 cytochrome c oxidase subunit III YP_004231828.1 KEGG: bgf:BC1003_4035 cytochrome c oxidase subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_004231829.1 KEGG: bgf:BC1003_4034 cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I YP_004231830.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; KEGG: bgf:BC1003_4033 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein YP_004231831.1 KEGG: bge:BC1002_1601 hypothetical protein YP_004231832.1 KEGG: bgf:BC1003_4032 hypothetical protein YP_004231833.1 PFAM: heat shock protein Hsp20; KEGG: bgf:BC1003_4031 heat shock protein HSP20 YP_004231834.1 PFAM: heat shock protein Hsp20; KEGG: bgf:BC1003_4030 heat shock protein HSP20 YP_004231835.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_4029 glycosyl transferase group 1 YP_004231836.1 KEGG: bgf:BC1003_4028 hypothetical protein YP_004231837.1 KEGG: bgf:BC1003_4027 hypothetical protein YP_004231838.1 KEGG: bgf:BC1003_4026 hypothetical protein YP_004231839.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bgf:BC1003_4025 glutathione-dependent formaldehyde-activating GFA YP_004231840.1 KEGG: bgf:BC1003_4024 hypothetical protein YP_004231841.1 KEGG: bgf:BC1003_4023 hypothetical protein YP_004231842.1 PFAM: Putative ParB-like nuclease; KEGG: bgf:BC1003_4022 putative ParB-like nuclease YP_004231843.1 KEGG: bgf:BC1003_4021 hypothetical protein YP_004231844.1 KEGG: bgf:BC1003_4020 regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB YP_004231845.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-3 domain protein; response regulator receiver; KEGG: bgf:BC1003_4019 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; GAF domain protein; PAC repeat-containing protein; response regulator receiver YP_004231846.1 PFAM: Protein of unknown function DUF2795; KEGG: bgf:BC1003_4018 hypothetical protein YP_004231847.1 KEGG: bgf:BC1003_4017 hypothetical protein YP_004231848.1 KEGG: bgf:BC1003_4016 hypothetical protein YP_004231849.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgf:BC1003_4015 GCN5-related N-acetyltransferase YP_004231850.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bgf:BC1003_4014 NADH:flavin oxidoreductase/NADH oxidase YP_004231851.1 KEGG: bgf:BC1003_4013 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004231852.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_4008 major facilitator superfamily protein YP_004231853.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; KEGG: rme:Rmet_1568 transcriptional regulator; SMART: PAS domain containing protein; PAC repeat-containing protein YP_004231854.1 KEGG: bgf:BC1003_4006 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_004231855.1 KEGG: bgf:BC1003_4005 putative lipoprotein YP_004231856.1 KEGG: bgf:BC1003_4004 hypothetical protein YP_004231857.1 KEGG: bgf:BC1003_4003 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004231858.1 KEGG: bgf:BC1003_4002 hypothetical protein YP_004231859.1 KEGG: bgf:BC1003_4001 putative membrane-associated protein YP_004231860.1 PFAM: protein of unknown function DUF1800; KEGG: bgf:BC1003_4000 hypothetical protein YP_004231861.1 PFAM: protein of unknown function DUF1501; KEGG: bgf:BC1003_3999 hypothetical protein YP_004231862.1 KEGG: bgf:BC1003_3998 hypothetical protein YP_004231863.1 KEGG: bpr:GBP346_A2238 transcriptional regulator, MerR family/albicidin resistance protein; PFAM: TipAS antibiotic-recognition domain-containing protein; regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR YP_004231864.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_3997 porin gram-negative type YP_004231865.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bgf:BC1003_3996 cupin 2 conserved barrel domain-containing protein YP_004231866.1 PFAM: aminotransferase class V; KEGG: bgf:BC1003_3995 class I/II aminotransclass V aminotransferase YP_004231867.1 KEGG: bgf:BC1003_3994 major facilitator superfamily protein YP_004231868.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bgf:BC1003_3993 peptidase M20 YP_004231869.1 KEGG: bgf:BC1003_3992 LysR family transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_004231870.1 KEGG: bgf:BC1003_3986 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004231871.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bgf:BC1003_3985 dimethylmenaquinone methyltransferase YP_004231872.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_3984 major facilitator superfamily protein YP_004231873.1 KEGG: bgf:BC1003_3983 LacI family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004231874.1 KEGG: bgf:BC1003_3982 ubiquinol oxidase subunit II; TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II YP_004231875.1 KEGG: bgf:BC1003_3981 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_004231876.1 KEGG: bgf:BC1003_3980 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III YP_004231877.1 KEGG: bgf:BC1003_3979 cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_004231878.1 KEGG: bgf:BC1003_3977 hypothetical protein YP_004231879.1 KEGG: bgf:BC1003_3976 hypothetical protein YP_004231880.1 KEGG: bgf:BC1003_3975 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004231881.1 TIGRFAM: capsular exopolysaccharide family; KEGG: bgf:BC1003_3974 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_004231882.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_3973 glycosyl transferase group 1 YP_004231883.1 KEGG: bgf:BC1003_3972 hypothetical protein YP_004231884.1 PFAM: glycosyl transferase family 2; KEGG: bgf:BC1003_3971 glycosyl transferase family 2 YP_004231885.1 PFAM: polysaccharide biosynthesis protein; KEGG: bgf:BC1003_3970 polysaccharide biosynthesis protein YP_004231886.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_3969 glycosyl transferase group 1 YP_004231887.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: bgf:BC1003_3968 phosphoesterase PA-phosphatase related protein YP_004231888.1 PFAM: O-antigen polymerase; KEGG: bgf:BC1003_3967 O-antigen polymerase YP_004231889.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: bgf:BC1003_3966 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase YP_004231890.1 KEGG: bgf:BC1003_3965 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_004231891.1 KEGG: bgf:BC1003_3964 hypothetical protein YP_004231892.1 KEGG: bgf:BC1003_3963 hypothetical protein YP_004231893.1 PFAM: Phasin; KEGG: bgf:BC1003_3962 phasin family protein YP_004231894.1 PFAM: protein of unknown function DUF1486; KEGG: bgf:BC1003_3961 hypothetical protein YP_004231895.1 KEGG: bgf:BC1003_3960 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004231896.1 PFAM: ABC-2 type transporter; KEGG: bgf:BC1003_3959 ABC-2 type transporter YP_004231897.1 KEGG: bgf:BC1003_3958 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004231898.1 PFAM: secretion protein HlyD family protein; KEGG: bgf:BC1003_3957 secretion protein HlyD family protein YP_004231899.1 PFAM: Transcriptional regulator TetR ; regulatory protein TetR; KEGG: bgf:BC1003_3956 transcriptional regulator TetR YP_004231900.1 PFAM: class II aldolase/adducin family protein; KEGG: bgf:BC1003_3955 class II aldolase/adducin family protein YP_004231901.1 KEGG: bgf:BC1003_3954 haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_004231902.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_3953 LysR family transcriptional regulator YP_004231903.1 PFAM: Flavin-containing monooxygenase-like; KEGG: rpt:Rpal_2511 putative monooxygenase protein YP_004231904.1 PFAM: helix-turn-helix Fis-type; KEGG: bpy:Bphyt_5922 GAF modulated sigma54 specific transcriptional regulator, fis family YP_004231905.1 PFAM: protein of unknown function DUF330; KEGG: bgf:BC1003_3941 hypothetical protein YP_004231906.1 PFAM: Mammalian cell entry related domain protein; KEGG: bgf:BC1003_3940 mammalian cell entry related domain-containing protein YP_004231907.1 PFAM: Paraquat-inducible protein A; KEGG: bgf:BC1003_3939 paraquat-inducible protein A YP_004231908.1 PFAM: Paraquat-inducible protein A; KEGG: bgf:BC1003_3938 paraquat-inducible protein A YP_004231909.1 PFAM: Protein of unknown function DUF2950; KEGG: bgf:BC1003_3937 hypothetical protein YP_004231910.1 KEGG: bgf:BC1003_3936 hypothetical protein YP_004231911.1 KEGG: bgf:BC1003_3935 hypothetical protein YP_004231912.1 PFAM: SNARE associated Golgi protein; phosphoesterase PA-phosphatase related; KEGG: bgf:BC1003_3933 phosphoesterase PA-phosphatase related protein YP_004231913.1 KEGG: bgf:BC1003_3932 17 kDa surface antigen YP_004231914.1 KEGG: bgf:BC1003_3931 hypothetical protein YP_004231915.1 PFAM: OsmC family protein; KEGG: bgf:BC1003_3930 OsmC family protein YP_004231916.1 KEGG: bgf:BC1003_3929 hypothetical protein YP_004231917.1 KEGG: bgf:BC1003_3928 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004231918.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bgf:BC1003_3927 lysine exporter protein LysE/YggA YP_004231919.1 PFAM: protein of unknown function DUF1289; KEGG: bgf:BC1003_3926 hypothetical protein YP_004231920.1 PFAM: protein of unknown function UPF0060; KEGG: bgf:BC1003_3925 hypothetical protein YP_004231921.1 PFAM: Domain of unknown function DUF1993; KEGG: bgf:BC1003_3924 hypothetical protein YP_004231922.1 PFAM: Peptidase S53 propeptide; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bgf:BC1003_3923 peptidase S53 propeptide YP_004231923.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bgf:BC1003_3922 peptidase S10 serine carboxypeptidase YP_004231924.1 KEGG: bgf:BC1003_3921 hypothetical protein YP_004231925.1 KEGG: bgf:BC1003_3920 hypothetical protein YP_004231926.1 KEGG: bgf:BC1003_3919 hypothetical protein YP_004231927.1 KEGG: bgf:BC1003_3918 hypothetical protein YP_004231928.1 TIGRFAM: NAD+ synthetase; KEGG: bgf:BC1003_3917 NAD+ synthetase YP_004231929.1 KEGG: bgf:BC1003_3915 hypothetical protein YP_004231930.1 PFAM: ABC-1 domain-containing protein; KEGG: bgf:BC1003_3914 ABC-1 domain-containing protein YP_004231931.1 KEGG: bph:Bphy_4147 hypothetical protein YP_004231932.1 PFAM: amidohydrolase 2; KEGG: bge:BC1002_7087 amidohydrolase 2 YP_004231933.1 PFAM: major facilitator superfamily MFS_1; KEGG: bge:BC1002_7088 major facilitator superfamily MFS_1 YP_004231934.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bge:BC1002_7089 L-carnitine dehydratase/bile acid-inducible protein F YP_004231935.1 PFAM: pyruvate carboxyltransferase; KEGG: bge:BC1002_7090 pyruvate carboxyltransferase YP_004231936.1 KEGG: bge:BC1002_7091 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004231937.1 PFAM: Calcium/calmodulin dependent protein kinase II association-domain protein; KEGG: reu:Reut_A2135 hypothetical protein YP_004231938.1 PFAM: Protein of unknown function DUF3460; KEGG: bxe:Bxe_A2585 hypothetical protein YP_004231939.1 KEGG: sme:SMc02072 hypothetical protein YP_004231940.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; histidine kinase A domain protein; KEGG: bgf:BC1003_3891 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAC repeat-containing protein; PAS domain containing protein; histidine kinase A domain protein YP_004231941.1 KEGG: rlt:Rleg2_5207 hypothetical protein YP_004231942.1 KEGG: rlt:Rleg2_5208 hypothetical protein YP_004231943.1 PFAM: natural resistance-associated macrophage protein; KEGG: rlt:Rleg2_5209 putative Mn2+/Fe2+ transporter protein YP_004231944.1 KEGG: bgf:BC1003_3890 peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_004231945.1 KEGG: bge:BC1002_1221 hypothetical protein YP_004231946.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pst:PSPTO_1056 oxidoreductase, short chain dehydrogenase/reductase family YP_004231947.1 KEGG: bpy:Bphyt_5870 aminotransferase class V YP_004231948.1 KEGG: bpy:Bphyt_5544 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004231949.1 KEGG: bgf:BC1003_5808 hypothetical protein YP_004231950.1 PFAM: Lipocalin family protein; KEGG: bxe:Bxe_A1894 putative outer membrane lipoprotein, lipocalin Blc like YP_004231951.1 PFAM: protein of unknown function DUF1488; KEGG: bpy:Bphyt_6317 periplasmic protein of unknown function, DUF1488 YP_004231952.1 KEGG: bge:BC1002_6732 aminoglycoside phosphotransferase YP_004231953.1 PFAM: nitroreductase; KEGG: bpy:Bphyt_5597 hypothetical protein YP_004231954.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: bph:Bphy_1095 hypothetical protein YP_004231955.1 PFAM: Bestrophin-like; KEGG: bac:BamMC406_5562 membrane protein-like protein YP_004231956.1 KEGG: bgf:BC1003_0570 alkylhydroperoxidase like protein, AhpD family; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004231957.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bgf:BC1003_0571 cupin 2 conserved barrel domain-containing protein YP_004231958.1 KEGG: bac:BamMC406_5560 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_004231959.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_2405 transcriptional regulator, LysR family YP_004231960.1 KEGG: bch:Bcen2424_6851 hypothetical protein YP_004231961.1 KEGG: bgf:BC1003_5038 outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein YP_004231962.1 KEGG: bgf:BC1003_5037 hypothetical protein YP_004231963.1 KEGG: bpy:Bphyt_2116 hypothetical protein YP_004231964.1 PFAM: Organic solvent tolerance protein; KEGG: bgf:BC1003_5035 organic solvent tolerance protein YP_004231965.1 PFAM: alpha/beta hydrolase fold; KEGG: bac:BamMC406_3196 PGAP1 family protein YP_004231966.1 KEGG: bam:Bamb_5052 hypothetical protein YP_004231967.1 KEGG: bxe:Bxe_B1877 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004231968.1 KEGG: bgf:BC1003_5632 2-aminoethylphosphonate ABC transporter 2-aminoethylphosphonate-binding protein; TIGRFAM: 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein; PFAM: extracellular solute-binding protein family 1 YP_004231969.1 TIGRFAM: 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: bpy:Bphyt_4790 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; SMART: AAA ATPase YP_004231970.1 KEGG: bxe:Bxe_B1873 ABC transporter, inner membrane subunit; TIGRFAM: 2-aminoethylphosphonate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component YP_004231971.1 KEGG: bxe:Bxe_B1872 ABC transporter, inner membrane subunit; TIGRFAM: 2-aminoethylphosphonate ABC transport system, membrane component PhnV; PFAM: binding-protein-dependent transport systems inner membrane component YP_004231972.1 TIGRFAM: phosphonate utilization associated transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: bxe:Bxe_B1871 GntR family transcriptional regulator; SMART: GntR domain protein; regulatory protein GntR HTH YP_004231973.1 KEGG: bpy:Bphyt_4794 phosphonoacetate hydrolase; TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase YP_004231974.1 KEGG: bxe:Bxe_B1869 putative NADP-dependentglyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: phosphonoacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004231975.1 TIGRFAM: phosphonate degradation operons associated HDIG domain protein; KEGG: bpy:Bphyt_4796 hypothetical protein YP_004231976.1 PFAM: Transglycosylase-associated protein; KEGG: bgf:BC1003_5640 transglycosylase-associated protein YP_004231977.1 KEGG: bgf:BC1003_5641 hypothetical protein YP_004231978.1 PFAM: metallophosphoesterase; KEGG: bgf:BC1003_5642 metallophosphoesterase YP_004231979.1 KEGG: bgf:BC1003_5643 hypothetical protein YP_004231980.1 PFAM: nitroreductase; KEGG: bxe:Bxe_B1853 hypothetical protein YP_004231981.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bgf:BC1003_5644 2OG-Fe(II) oxygenase YP_004231982.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bgf:BC1003_5645 periplasmic-binding protein/LacI transcriptional regulator YP_004231983.1 KEGG: bgf:BC1003_5646 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004231984.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_5647 inner-membrane translocator YP_004231985.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_5648 inner-membrane translocator YP_004231986.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4812 major facilitator superfamily MFS_1 YP_004231987.1 PFAM: protein of unknown function DUF1445; KEGG: bpy:Bphyt_4813 hypothetical protein YP_004231988.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_4814 transcriptional regulator, LysR family YP_004231989.1 KEGG: bgf:BC1003_5649 malonate decarboxylase subunit epsilon; TIGRFAM: malonate decarboxylase, epsilon subunit; PFAM: Acyl transferase YP_004231990.1 TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: bgf:BC1003_5650 holo-ACP synthase, malonate decarboxylase-specific; PFAM: Holo-ACP synthase, malonate decarboxylase-specific YP_004231991.1 KEGG: bgf:BC1003_5651 malonate decarboxylase subunit gamma; TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit YP_004231992.1 KEGG: bgf:BC1003_5652 malonate decarboxylase subunit beta; TIGRFAM: malonate decarboxylase, beta subunit; PFAM: carboxyl transferase YP_004231993.1 KEGG: bxe:Bxe_B1846 malonate decarboxylase subunit delta; TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit YP_004231994.1 TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; KEGG: bgf:BC1003_5654 triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein YP_004231995.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: bgf:BC1003_5655 malonate decarboxylase subunit alpha YP_004231996.1 KEGG: bgf:BC1003_5656 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH YP_004231997.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_5657 hypothetical protein YP_004231998.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5658 LysR family transcriptional regulator YP_004231999.1 PFAM: Carbohydrate-selective porin OprB; KEGG: bgf:BC1003_5659 carbohydrate-selective porin OprB YP_004232000.1 KEGG: bgf:BC1003_5660 hypothetical protein YP_004232001.1 KEGG: bgf:BC1003_5661 N-hydroxyarylamine O-acetyltransferase; PFAM: N-acetyltransferase YP_004232002.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bgf:BC1003_5662 isoprenylcysteine carboxyl methyltransferase YP_004232003.1 KEGG: bpy:Bphyt_4834 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004232004.1 KEGG: bgf:BC1003_5664 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004232005.1 KEGG: bgf:BC1003_5665 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004232006.1 KEGG: bgf:BC1003_5666 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004232007.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: bgf:BC1003_5667 phenylalanine/histidine ammonia-lyase YP_004232008.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: bgf:BC1003_5668 GntR family transcriptional regulator; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH YP_004232009.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: bgf:BC1003_5669 GntR family transcriptional regulator; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH YP_004232010.1 KEGG: bgf:BC1003_5670 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004232011.1 KEGG: bgf:BC1003_5671 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004232012.1 KEGG: bgf:BC1003_5672 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004232013.1 KEGG: bgf:BC1003_5673 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004232014.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bgf:BC1003_5674 2OG-Fe(II) oxygenase YP_004232015.1 PFAM: FAD linked oxidase domain protein; KEGG: bgf:BC1003_5675 FAD linked oxidase domain-containing protein YP_004232016.1 PFAM: GMC oxidoreductase; glucose-methanol-choline oxidoreductase; KEGG: bgf:BC1003_5676 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004232017.1 KEGG: bgf:BC1003_5677 hypothetical protein YP_004232018.1 KEGG: bgf:BC1003_5678 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_004232019.1 KEGG: bgf:BC1003_5679 LuxR family two component transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_004232020.1 KEGG: bgf:BC1003_5680 hypothetical protein YP_004232021.1 KEGG: bgf:BC1003_5681 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004232022.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bgf:BC1003_5682 cytochrome bd ubiquinol oxidase subunit I YP_004232023.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_5683 NAD-dependent epimerase/dehydratase YP_004232024.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_4857 major facilitator superfamily MFS_1 YP_004232025.1 PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; manually curated; KEGG: bgf:BC1003_5685 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase YP_004232026.1 PFAM: glycoside hydrolase family 28; KEGG: bpy:Bphyt_4858 glycoside hydrolase family 28 YP_004232027.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: bgf:BC1003_5686 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004232028.1 KEGG: bgf:BC1003_5687 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase YP_004232029.1 PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_5688 aldehyde dehydrogenase YP_004232030.1 KEGG: bgf:BC1003_5689 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH YP_004232031.1 KEGG: bgf:BC1003_5690 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_004232032.1 TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; KEGG: bgf:BC1003_5691 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase YP_004232033.1 SMART: SAF domain protein; TIGRFAM: galactarate dehydratase; KEGG: bgf:BC1003_5692 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_004232034.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_5693 NAD-dependent epimerase/dehydratase YP_004232035.1 PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; KEGG: bgf:BC1003_5694 SMP-30/gluconolaconase/LRE-like region-containing protein YP_004232036.1 KEGG: bgf:BC1003_5695 TRAP dicarboxylate transporter DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_004232037.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bgf:BC1003_5696 tripartite ATP-independent periplasmic transporter DctQ component YP_004232038.1 KEGG: bgf:BC1003_5697 TRAP dicarboxylate transporter DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004232039.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_5698 porin gram-negative type YP_004232040.1 KEGG: bgf:BC1003_5699 4-oxalocrotonate tautomerase family enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_004232041.1 PFAM: class II aldolase/adducin family protein; KEGG: bgf:BC1003_5700 class II aldolase/adducin family protein YP_004232042.1 PFAM: Urea transporter; KEGG: bgf:BC1003_5701 UreA transporter YP_004232043.1 PFAM: protein of unknown function DUF1089; KEGG: bgf:BC1003_5702 hypothetical protein YP_004232044.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B1792 putative hydrolase YP_004232045.1 PFAM: Uncharacterised conserved protein UCP07580; KEGG: bgf:BC1003_5704 hypothetical protein YP_004232046.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5705 short-chain dehydrogenase/reductase SDR YP_004232047.1 PFAM: Flavin-containing monooxygenase-like; KEGG: bgf:BC1003_5706 4-hydroxyacetophenone monooxygenase YP_004232048.1 SMART: regulatory protein MerR; KEGG: bgf:BC1003_5707 regulatory protein MerR YP_004232049.1 KEGG: bxe:Bxe_B1787 putative phosphinothricin N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004232050.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bgf:BC1003_5709 hypothetical protein YP_004232051.1 KEGG: bgf:BC1003_5710 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004232052.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bgf:BC1003_5711 TRAP transporter solute receptor, TAXI family YP_004232053.1 KEGG: bgf:BC1003_5712 hypothetical protein YP_004232054.1 KEGG: bgf:BC1003_5715 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004232055.1 PFAM: ferric-uptake regulator; KEGG: bgf:BC1003_5716 ferric uptake regulator, Fur family YP_004232056.1 PFAM: Glutathione S-transferase domain; KEGG: bgf:BC1003_5717 glutathione S-transferase domain-containing protein YP_004232057.1 PFAM: NERD domain protein; KEGG: bgf:BC1003_5718 NERD domain-containing protein YP_004232058.1 PFAM: phosphoribosyltransferase; KEGG: bgf:BC1003_5719 phosphoribosyltransferase YP_004232059.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bgf:BC1003_5720 oxidoreductase molybdopterin-binding protein YP_004232060.1 KEGG: bgf:BC1003_5721 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein YP_004232061.1 KEGG: bgf:BC1003_5722 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver YP_004232062.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_5726 FAD dependent oxidoreductase YP_004232063.1 KEGG: bpy:Bphyt_4904 hypothetical protein YP_004232064.1 KEGG: bgf:BC1003_5728 hypothetical protein YP_004232065.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bgf:BC1003_5729 ornithine cyclodeaminase/mu-crystallin YP_004232066.1 PFAM: glucose-6-phosphate dehydrogenase; manually curated; KEGG: bgf:BC1003_5730 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase YP_004232067.1 KEGG: bgf:BC1003_5731 type IV / VI secretion system protein, DotU family; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU YP_004232068.1 KEGG: bpy:Bphyt_4910 type VI secretion protein, VC_A0114 family; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_004232069.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: bgf:BC1003_5733 type VI secretion lipoprotein, VC_A0113 family YP_004232070.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: bgf:BC1003_5734 tetratricopeptide repeat-containing protein YP_004232071.1 KEGG: bpy:Bphyt_4913 type VI secretion protein, VC_A0107 family; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301 YP_004232072.1 KEGG: bgf:BC1003_5736 type VI secretion protein, EvpB/VC_A0108 family; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_004232073.1 KEGG: bgf:BC1003_5737 type VI secretion system effector, Hcp1 family; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004232074.1 KEGG: bgf:BC1003_5738 type VI secretion system lysozyme-related protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein YP_004232075.1 KEGG: bgf:BC1003_5739 type VI secretion protein, VC_A0110 family; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_004232076.1 KEGG: bgf:BC1003_5740 type VI secretion protein, VC_A0111 family; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_004232077.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: bgf:BC1003_5741 type VI secretion ATPase, ClpV1 family; SMART: AAA ATPase YP_004232078.1 KEGG: bgf:BC1003_5742 type VI secretion-associated protein, ImpA family; TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein YP_004232079.1 PFAM: OmpA/MotB domain protein; KEGG: bgf:BC1003_5743 OmpA/MotB domain-containing protein YP_004232080.1 KEGG: bgf:BC1003_5744 type VI secretion-associated protein, BMA_A0400 family; TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; PFAM: Type VI secretion system-associated, BMAA0400 YP_004232081.1 KEGG: bgf:BC1003_5745 type VI secretion protein IcmF; TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215 YP_004232082.1 KEGG: bgf:BC1003_5746 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; manually curated; PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_004232083.1 KEGG: bgf:BC1003_5747 hypothetical protein YP_004232084.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: bgf:BC1003_5748 inosine/uridine-preferring nucleoside hydrolase YP_004232085.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5749 LysR family transcriptional regulator YP_004232086.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bgf:BC1003_5750 alcohol dehydrogenase zinc-binding domain-containing protein YP_004232087.1 KEGG: bgf:BC1003_5751 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004232088.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bgf:BC1003_5752 diguanylate cyclase; SMART: GGDEF domain containing protein; PAC repeat-containing protein YP_004232089.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bpy:Bphyt_4939 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004232090.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cti:pRALTA_0287 conserved hypothetical protein; putative periplasmic sugar-binding domain protein YP_004232091.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; PAS fold-3 domain protein; KEGG: cti:pRALTA_0288 putative multi-sensor signal transduction histidine kinase; SMART: histidine kinase HAMP region domain protein; PAC repeat-containing protein; PAS domain containing protein; ATP-binding region ATPase domain protein YP_004232092.1 KEGG: bgf:BC1003_5753 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit YP_004232093.1 KEGG: bgf:BC1003_5754 hypothetical protein YP_004232094.1 PFAM: protein of unknown function UPF0118; KEGG: bgf:BC1003_5755 hypothetical protein YP_004232095.1 PFAM: esterase; KEGG: bgf:BC1003_5756 esterase YP_004232096.1 PFAM: Uncharacterised conserved protein UCP028704, OpgC; KEGG: bgf:BC1003_5757 hypothetical protein YP_004232097.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_5758 porin gram-negative type YP_004232098.1 KEGG: bgf:BC1003_5759 hypothetical protein YP_004232099.1 PFAM: Protein of unknown function DUF3465; KEGG: bxe:Bxe_B1696 hypothetical protein YP_004232100.1 KEGG: bgf:BC1003_5760 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004232101.1 PFAM: alpha/beta hydrolase fold; KEGG: bgf:BC1003_5761 alpha/beta hydrolase fold protein YP_004232102.1 KEGG: bgf:BC1003_5762 hypothetical protein YP_004232103.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: bgf:BC1003_5768 (2Fe-2S)-binding domain-containing protein YP_004232104.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bgf:BC1003_5769 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein YP_004232105.1 KEGG: bgf:BC1003_5770 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004232106.1 KEGG: bgf:BC1003_5771 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004232107.1 KEGG: bgf:BC1003_5772 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004232108.1 KEGG: bgf:BC1003_5773 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004232109.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: bxe:Bxe_B1685 ABC spermidine/putrescine transporter, ATPase subunit; SMART: AAA ATPase YP_004232110.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1684 ABC spermidine/putrescine transporter, inner membrane subunit YP_004232111.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_4967 binding-protein-dependent transport systems inner membrane component YP_004232112.1 PFAM: extracellular solute-binding protein family 1; KEGG: bpy:Bphyt_4968 extracellular solute-binding protein family 1 YP_004232113.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5774 LysR family transcriptional regulator YP_004232114.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bgf:BC1003_5775 sodium/calcium exchanger membrane region YP_004232115.1 PFAM: transport-associated; KEGG: bgf:BC1003_5776 transport-associated protein YP_004232116.1 KEGG: bgf:BC1003_5777 DNA-3-methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG) YP_004232117.1 KEGG: bgf:BC1003_5778 hypothetical protein YP_004232118.1 KEGG: bgf:BC1003_5779 putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004232120.1 TIGRFAM: GTP cyclohydrolase II; KEGG: bgf:BC1003_5780 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II YP_004232121.1 PFAM: Integrase catalytic region; KEGG: rso:RSp0548 ISRSO8-transposase orfB protein YP_004232122.1 KEGG: bcm:Bcenmc03_1716 beta-lactamase domain-containing protein YP_004232123.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcm:Bcenmc03_1715 LysR family transcriptional regulator YP_004232124.1 PFAM: protein of unknown function DUF1486; KEGG: ctt:CtCNB1_1314 hypothetical protein YP_004232125.1 SMART: beta-lactamase domain protein; KEGG: ctt:CtCNB1_1313 twin-arginine translocation pathway signal YP_004232126.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bch:Bcen2424_3293 (acyl-carrier-protein) phosphodiesterase YP_004232127.1 KEGG: bcm:Bcenmc03_1718 hypothetical protein YP_004232128.1 manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain-containing protein; KEGG: bcm:Bcenmc03_6981 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain YP_004232129.1 KEGG: bra:BRADO4625 putative alpha/beta-hydrolases superfamily protein YP_004232130.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: cti:RALTA_B0905 4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004232131.1 KEGG: bmj:BMULJ_00998 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit YP_004232132.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bge:BC1002_2215 electron transfer flavoprotein alpha/beta-subunit YP_004232133.1 PFAM: FAD linked oxidase domain protein; KEGG: bgf:BC1003_6007 FAD linked oxidase domain-containing protein YP_004232134.1 PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_2506 major facilitator transporter YP_004232135.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_6811 LysR family transcriptional regulator YP_004232136.1 KEGG: bge:BC1002_6411 hypothetical protein YP_004232137.1 PFAM: protein of unknown function DUF417; KEGG: reh:H16_A1804 hypothetical protein YP_004232138.1 PFAM: GCN5-related N-acetyltransferase; KEGG: reh:H16_A1802 acetyltransferase YP_004232139.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bge:BC1002_6412 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein YP_004232140.1 PFAM: Glutathione S-transferase domain; KEGG: reh:H16_A1801 glutathione S-transferase YP_004232141.1 KEGG: bge:BC1002_6414 carboxymuconolactone decarboxylase; TIGRFAM: uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase YP_004232142.1 PFAM: nitroreductase; KEGG: bge:BC1002_6415 nitroreductase YP_004232143.1 KEGG: mms:mma_0982 hypothetical protein YP_004232144.1 KEGG: bge:BC1002_6417 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004232145.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mms:mma_0972 short-chain dehydrogenase/reductase SDR YP_004232146.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mms:mma_0969 acyl carrier protein phosphodiesterase YP_004232147.1 PFAM: nitroreductase; KEGG: bge:BC1002_6415 nitroreductase YP_004232148.1 KEGG: bge:BC1002_6419 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004232149.1 KEGG: bgf:BC1003_2242 filamentous hemagglutinin family outer membrane protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein YP_004232150.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: bgf:BC1003_2241 polypeptide-transport-associated domain-containing protein ShlB-type YP_004232151.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bgf:BC1003_2240 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004232152.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; KEGG: bgf:BC1003_2239 filamentous hemagglutinin family outer membrane protein YP_004232153.1 KEGG: bgl:bglu_2g08120 hypothetical protein YP_004232154.1 KEGG: bvi:Bcep1808_3992 filamentous haemagglutinin outer membrane protein YP_004232155.1 KEGG: act:ACLA_037380 histone acetyltransferase (MysT1), putative YP_004232156.1 KEGG: bph:Bphy_7336 hypothetical protein YP_004232157.1 PFAM: FAD dependent oxidoreductase; KEGG: bgf:BC1003_5534 FAD dependent oxidoreductase YP_004232158.1 KEGG: bgf:BC1003_5533 major facilitator superfamily protein YP_004232159.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bgf:BC1003_5532 LysR family transcriptional regulator YP_004232160.1 PFAM: transposase IS200-family protein; KEGG: bge:BC1002_5980 protein of unknown function DUF1568 YP_004232161.1 PFAM: regulatory protein TetR; KEGG: bac:BamMC406_5281 TetR family transcriptional regulator YP_004232162.1 KEGG: bph:Bphy_3537 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004232163.1 PFAM: acriflavin resistance protein; KEGG: bph:Bphy_3538 acriflavin resistance protein YP_004232164.1 KEGG: bph:Bphy_3539 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004232165.1 PFAM: regulatory protein TetR; KEGG: bge:BC1002_6426 transcriptional regulator, TetR family YP_004232166.1 PFAM: protein of unknown function UPF0118; KEGG: bpy:Bphyt_0747 protein of unknown function UPF0118 YP_004232167.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bac:BamMC406_5282 glyoxalase/bleomycin resistance protein/dioxygenase YP_004232168.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bac:BamMC406_5283 fumarylacetoacetate (FAA) hydrolase YP_004232169.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bph:Bphy_3530 AMP-binding domain protein YP_004232170.1 PFAM: OmpW family protein; KEGG: bac:BamMC406_5285 OmpW family protein YP_004232171.1 KEGG: bac:BamMC406_5286 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_004232172.1 KEGG: bph:Bphy_3525 pyrogallol hydroxytransferase YP_004232173.1 KEGG: bpy:Bphyt_6747 phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004232174.1 PFAM: Endoribonuclease L-PSP; KEGG: bgf:BC1003_5617 endoribonuclease L-PSP YP_004232175.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bgf:BC1003_5618 NAD-dependent epimerase/dehydratase YP_004232176.1 KEGG: bgf:BC1003_5619 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004232177.1 KEGG: bgf:BC1003_5620 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004232178.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_5622 major facilitator superfamily protein YP_004232179.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: bgf:BC1003_5623 (2Fe-2S)-binding domain-containing protein YP_004232180.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bgf:BC1003_5624 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein YP_004232181.1 PFAM: DoxX family protein; KEGG: bgf:BC1003_5625 DoxX family protein YP_004232182.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bgf:BC1003_5626 iron-containing alcohol dehydrogenase YP_004232183.1 KEGG: bgf:BC1003_5627 stress responsive alpha-beta barrel domain-containing protein; PFAM: Stress responsive alpha-beta barrel domain-containing protein; SMART: Stress responsive alpha-beta barrel domain-containing protein YP_004232184.1 KEGG: bgf:BC1003_5628 hydroxyquinol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein YP_004232185.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_5629 LysR family transcriptional regulator YP_004232186.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_0644 LysR family transcriptional regulator YP_004232187.1 KEGG: bgf:BC1003_0643 major facilitator transporter YP_004232188.1 KEGG: bgf:BC1003_0642 hypothetical protein YP_004232189.1 PFAM: Tannase and feruloyl esterase; KEGG: bgf:BC1003_0641 tannase and feruloyl esterase YP_004232190.1 PFAM: protein of unknown function DUF214; KEGG: bph:Bphy_3709 hypothetical protein YP_004232191.1 PFAM: protein of unknown function DUF214; KEGG: bgf:BC1003_4010 hypothetical protein YP_004232192.1 KEGG: bph:Bphy_3711 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004232193.1 KEGG: bph:Bphy_3712 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004232194.1 PFAM: Pyrrolo-quinoline quinone repeat-containing protein; KEGG: bph:Bphy_6636 pyrrolo-quinoline quinone YP_004232195.1 KEGG: bgf:BC1003_5818 hypothetical protein YP_004232196.1 KEGG: bgf:BC1003_5819 ketopantoate reductase ApbA/PanE domain-containing protein YP_004232197.1 KEGG: bgf:BC1003_5820 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004232198.1 KEGG: bgf:BC1003_5821 putative transmembrane anti-sigma factor YP_004232199.1 KEGG: bgf:BC1003_5822 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004232200.1 KEGG: bgf:BC1003_5823 transmembrane transcriptional regulator (anti-sigma factor) YP_004232201.1 KEGG: bgf:BC1003_5824 hypothetical protein YP_004232202.1 PFAM: FAD dependent oxidoreductase; Glycine cleavage T-protein barrel; glycine cleavage T protein (aminomethyl transferase); KEGG: bpy:Bphyt_4985 FAD dependent oxidoreductase YP_004232203.1 KEGG: bxe:Bxe_B1665 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004232204.1 KEGG: bgf:BC1003_5825 SNF2-related protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004232205.1 KEGG: bgf:BC1003_5826 hypothetical protein YP_004232206.1 KEGG: bgf:BC1003_5827 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004232207.1 KEGG: bgf:BC1003_5828 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A YP_004232208.1 KEGG: bxe:Bxe_B1505 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004232209.1 KEGG: bxe:Bxe_B1506 putative HipA-like protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein YP_004232210.1 KEGG: bmj:BMULJ_05414 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR domain protein YP_004232211.1 PFAM: protein of unknown function DUF1185; KEGG: bpr:GBP346_A2134 peptide synthase YP_004232212.1 PFAM: alpha/beta hydrolase fold; KEGG: bpr:GBP346_A2133 alpha/beta hydrolase family protein YP_004232213.1 KEGG: bpr:GBP346_A2132 nitrilotriacetate monooxygenase; PFAM: flavin reductase domain protein FMN-binding; SMART: flavin reductase domain protein FMN-binding YP_004232214.1 PFAM: Luciferase-like, subgroup; KEGG: bpr:GBP346_A2131 glucose-6-phosphate dehydrogenase YP_004232215.1 PFAM: Aldehyde Dehydrogenase; KEGG: bpm:BURPS1710b_2213 aldehyde dehydrogenase YP_004232216.1 PFAM: NIPSNAP family containing protein; KEGG: bpr:GBP346_A2129 nipsnap superfamily YP_004232217.1 PFAM: extracellular solute-binding protein family 1; KEGG: bmj:BMULJ_05416 spermidine/putrescine transport system substrate-binding protein YP_004232218.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmj:BMULJ_05417 spermidine/putrescine transport system permease protein YP_004232219.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmj:BMULJ_05418 spermidine/putrescine transport system permease protein YP_004232220.1 KEGG: bpr:GBP346_A2125 spermidine/putrescine import ATP-binding protein PotA; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004232221.1 KEGG: bmj:BMULJ_05420 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR domain protein YP_004232222.1 KEGG: bgf:BC1003_5834 winged helix family two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein YP_004232223.1 PFAM: FecR protein; Peptidoglycan-binding lysin domain; KEGG: bgf:BC1003_5835 FecR protein YP_004232224.1 KEGG: bgf:BC1003_5836 integral membrane sensor signal transduction histidine kinase; PFAM: CHASE2 domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004232225.1 KEGG: bgf:BC1003_5837 putative lipoprotein YP_004232226.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; KEGG: bpy:Bphyt_4995 cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase YP_004232227.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: bgf:BC1003_5839 CobB/CobQ domain-containing protein glutamine amidotransferase YP_004232228.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: bgf:BC1003_5840 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_004232229.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: bgf:BC1003_5841 cobalamin (vitamin B12) biosynthesis CbiG protein YP_004232230.1 KEGG: bgf:BC1003_5842 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004232231.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bgf:BC1003_5843 cobalamin biosynthesis protein CobW; SMART: cobalamin synthesis CobW domain protein YP_004232232.1 TIGRFAM: cobaltochelatase, CobN subunit; KEGG: bgf:BC1003_5844 cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase YP_004232233.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bgf:BC1003_5845 magnesium chelatase; SMART: AAA ATPase YP_004232234.1 SMART: von Willebrand factor type A; KEGG: bgf:BC1003_5846 hypothetical protein YP_004232235.1 KEGG: bgf:BC1003_5847 secreted hydrolase-like protein YP_004232236.1 PFAM: protein of unknown function DUF214; KEGG: bgf:BC1003_5848 hypothetical protein YP_004232237.1 KEGG: bgf:BC1003_5849 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004232238.1 KEGG: bgf:BC1003_5850 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_004232239.1 KEGG: bpy:Bphyt_5015 alkylhydroperoxidase like protein, AhpD family; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004232240.1 KEGG: bgf:BC1003_5852 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004232241.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5855 short-chain dehydrogenase/reductase SDR YP_004232242.1 PFAM: transport-associated; KEGG: bgf:BC1003_5856 transport-associated protein YP_004232243.1 KEGG: bgf:BC1003_5857 hypothetical protein YP_004232244.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bgf:BC1003_5858 glycine betaine/L-proline ABC transporter ATPase subunit; SMART: AAA ATPase YP_004232245.1 KEGG: bgf:BC1003_5859 choline ABC transporter permease; TIGRFAM: choline ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component YP_004232246.1 KEGG: bgf:BC1003_5860 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; SMART: Helix-turn-helix, AraC domain YP_004232247.1 KEGG: bgf:BC1003_5861 choline ABC transporter periplasmic-binding protein; TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system YP_004232248.1 KEGG: bgf:BC1003_5862 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004232249.1 TIGRFAM: L-serine dehydratase 1; KEGG: bgf:BC1003_5863 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_004232250.1 KEGG: bgf:BC1003_5864 sarcosine oxidase subunit beta family; TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase YP_004232251.1 PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: bgf:BC1003_5865 sarcosine oxidase subunit delta heterotetrameric YP_004232252.1 KEGG: bgf:BC1003_5866 sarcosine oxidase subunit alpha family; TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004232253.1 PFAM: Sarcosine oxidase gamma subunit; KEGG: bgf:BC1003_5867 sarcosine oxidase subunit gamma YP_004232254.1 KEGG: bgf:BC1003_5868 hypothetical protein YP_004232255.1 KEGG: bgf:BC1003_5869 major facilitator superfamily protein YP_004232256.1 KEGG: bgf:BC1003_5870 beta-lactamase; PFAM: beta-lactamase YP_004232257.1 KEGG: bgf:BC1003_5871 choline dehydrogenase; TIGRFAM: choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase YP_004232258.1 KEGG: bgf:BC1003_5872 betaine aldehyde dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004232259.1 KEGG: bgf:BC1003_5873 transcriptional repressor BetI; TIGRFAM: transcriptional repressor BetI; PFAM: regulatory protein TetR YP_004232260.1 KEGG: bgf:BC1003_5874 formaldehyde dehydrogenase, glutathione-independent; TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_004232261.1 KEGG: bgf:BC1003_5875 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004232262.1 KEGG: bgf:BC1003_5876 glycine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_004232263.1 KEGG: bgf:BC1003_5877 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase YP_004232264.1 PFAM: 4-vinyl reductase 4VR; KEGG: bgf:BC1003_5878 4-vinyl reductase 4VR YP_004232265.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bgf:BC1003_5879 NADH:flavin oxidoreductase/NADH oxidase YP_004232266.1 PFAM: Protein of unknown function DUF3483; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bgf:BC1003_5880 hypothetical protein YP_004232267.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: bgf:BC1003_5881 electron transfer flavoprotein subunit alpha YP_004232268.1 KEGG: bgf:BC1003_5882 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit YP_004232269.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bgf:BC1003_5883 Rieske (2Fe-2S) iron-sulfur domain-containing protein YP_004232270.1 PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: bgf:BC1003_5884 oxidoreductase FAD-binding domain-containing protein YP_004232271.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bgf:BC1003_5885 substrate-binding region of ABC-type glycine betaine transport system YP_004232272.1 KEGG: bxe:Bxe_B1575 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein YP_004232273.1 KEGG: bgf:BC1003_5887 LysR family transcriptional regulator; TIGRFAM: choline sulfate-utilization transcription factor; PFAM: LysR substrate-binding; regulatory protein LysR YP_004232274.1 KEGG: bgf:BC1003_5888 choline-sulfatase; TIGRFAM: choline-sulfatase; PFAM: sulfatase YP_004232275.1 KEGG: bgf:BC1003_5889 choline ABC transporter periplasmic-binding protein; TIGRFAM: choline ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system YP_004232276.1 PFAM: porin Gram-negative type; KEGG: bgf:BC1003_5890 porin gram-negative type YP_004232277.1 KEGG: bgf:BC1003_1375 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase YP_004232278.1 KEGG: bpy:Bphyt_5566 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004232279.1 KEGG: reh:H16_A1981 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004232280.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bgf:BC1003_5901 ATPase, P-type (transporting), HAD superfamily, subfamily IC; SMART: cation transporting ATPase domain protein YP_004232282.1 PFAM: CreA family protein; KEGG: bgf:BC1003_1749 CreA family protein YP_004232283.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bxe:Bxe_B1026 putative transmembrane protein YP_004232284.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bxe:Bxe_B1027 hypothetical protein YP_004232285.1 KEGG: bgf:BC1003_1740 polyhydroxyalkanoate depolymerase, intracellular; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_004232286.1 PFAM: LemA family protein; KEGG: bgf:BC1003_1724 LemA family protein YP_004232287.1 PFAM: UspA domain-containing protein; KEGG: bxe:Bxe_A1888 putative universal stress protein YP_004232288.1 KEGG: bph:Bphy_6337 hypothetical protein YP_004232289.1 KEGG: bte:BTH_II1368 hypothetical protein; PFAM: Protein of unknown function DUF3693; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004232293.1 KEGG: pno:SNOG_01621 hypothetical protein YP_004232294.1 PFAM: replication gene A; KEGG: hse:Hsero_2359 bacteriophage replication protein YP_004232295.1 KEGG: cre:CHLREDRAFT_6783 SNF2 superfamily protein YP_004232296.1 KEGG: mpt:Mpe_A1838 hypothetical protein YP_004232297.1 KEGG: reh:H16_B1323 hypothetical protein YP_004232298.1 KEGG: reh:H16_B1322 hypothetical protein YP_004232299.1 KEGG: reh:H16_B1321 hypothetical protein YP_004232300.1 KEGG: reh:H16_B1320 hypothetical protein YP_004232301.1 KEGG: reh:H16_B1319 hypothetical protein YP_004232302.1 KEGG: reh:H16_B1318 hypothetical protein YP_004232303.1 KEGG: reh:H16_B1317 hypothetical protein YP_004232304.1 KEGG: reh:H16_B1316 hypothetical protein YP_004232305.1 KEGG: reh:H16_B1315 hypothetical protein YP_004232306.1 KEGG: reh:H16_B1314 hypothetical protein YP_004232307.1 PFAM: glycoside hydrolase family 24; KEGG: cch:Cag_0702 phage-related lysozyme YP_004232308.1 KEGG: pnu:Pnuc_1095 outer membrane autotransporter YP_004232309.1 KEGG: mbt:JTY_1397 PPE family protein YP_004232310.1 KEGG: cre:CHLREDRAFT_165065 ketoacid isomerase-like protein YP_004232311.1 KEGG: mva:Mvan_4049 hypothetical protein YP_004232312.1 KEGG: bgl:bglu_1g17530 hypothetical protein YP_004232313.1 SMART: helix-turn-helix domain protein; KEGG: reh:H16_B1328 hypothetical protein YP_004232315.1 KEGG: apb:SAR116_0263 FAD dependent oxidoreductase YP_004232316.1 KEGG: mex:Mext_4246 phage SPO1 DNA polymerase-related protein YP_004232317.1 KEGG: cse:Cseg_3167 methylmalonyl-CoA mutase YP_004232318.1 KEGG: oaa:100076613 similar to KIAA0390 YP_004232319.1 PFAM: replication gene A; KEGG: mpt:Mpe_A1837 bacteriophage replication protein YP_004232320.1 KEGG: rru:Rru_A3723 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase YP_004232321.1 KEGG: cwo:Cwoe_0446 transcriptional regulator, LuxR family YP_004232322.1 KEGG: reh:H16_B1322 hypothetical protein YP_004232324.1 KEGG: rcu:RCOM_2014950 hypothetical protein YP_004232325.1 KEGG: mgr:MGG_11467 hypothetical protein YP_004232326.1 KEGG: mpt:Mpe_A1844 PE-PGRS family protein YP_004232327.1 KEGG: reh:H16_B1316 hypothetical protein YP_004232328.1 KEGG: reh:H16_B1315 hypothetical protein YP_004232329.1 KEGG: reh:H16_B1314 hypothetical protein YP_004232330.1 PFAM: glycoside hydrolase family 24; KEGG: reh:H16_B1313 muramidase (phage lysozyme) YP_004232331.1 KEGG: mbt:JTY_1774 PE-PGRS family protein YP_004232332.1 KEGG: bfu:BC1G_00792 hypothetical protein YP_004232333.1 KEGG: dge:Dgeo_1618 polyprenyl synthetase YP_004232334.1 KEGG: swd:Swoo_0725 hypothetical protein YP_004232338.1 KEGG: bgl:bglu_1g17530 hypothetical protein YP_004232339.1 PFAM: Protein of unknown function DUF3701; integrase family protein; integrase domain protein SAM domain protein; KEGG: bge:BC1002_7117 integrase family protein YP_004232340.1 KEGG: aha:AHA_4001 hypothetical protein YP_004232341.1 KEGG: ajs:Ajs_1271 hypothetical protein YP_004232342.1 PFAM: DNA polymerase beta domain protein region; KEGG: ajs:Ajs_1270 hypothetical protein YP_004232343.1 KEGG: rme:Rmet_2341 hypothetical protein YP_004232344.1 KEGG: ajs:Ajs_1268 hypothetical protein YP_004232345.1 KEGG: ajs:Ajs_1267 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_004232346.1 KEGG: rsc:RCFBP_10940 conserved membrane protein of unknown function YP_004232347.1 manually curated; KEGG: bph:Bphy_7588 DNA helicase related protein YP_004232348.1 KEGG: bxe:Bxe_A0209 hypothetical protein YP_004232349.1 KEGG: bxe:Bxe_A0210 hypothetical protein YP_004232350.1 KEGG: azo:azo2309 hypothetical protein YP_004232351.1 KEGG: bam:Bamb_3974 type III restriction enzyme, res subunit YP_004232352.1 manually curated; KEGG: bge:BC1002_0431 hypothetical protein YP_004232353.1 manually curated; KEGG: bge:BC1002_0430 hypothetical protein YP_004232354.1 KEGG: bph:Bphy_6772 histone family protein nucleoid-structuring protein H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004232355.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bph:Bphy_4587 histone family protein nucleoid-structuring protein H-NS YP_004232356.1 PFAM: protein of unknown function DUF159; KEGG: bph:Bphy_7577 hypothetical protein YP_004232357.1 KEGG: bxe:Bxe_A0227 hypothetical protein YP_004232358.1 KEGG: bxe:Bxe_A0228 hypothetical protein YP_004232359.1 manually curated; KEGG: rcu:RCOM_0000800 hypothetical protein YP_004232360.1 TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; KEGG: bpy:Bphyt_5925 beta-ketoadipyl CoA thiolase; PFAM: Thiolase-like YP_004232361.1 KEGG: bcm:Bcenmc03_1022 electron transfer flavoprotein subunit alpha; PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit YP_004232362.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bph:Bphy_0762 electron transfer flavoprotein alpha/beta-subunit YP_004232363.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_2135 3-hydroxyacyl-CoA dehydrogenase, NAD-binding YP_004232364.1 SMART: CoA-binding domain protein; KEGG: dac:Daci_1885 CoA-binding domain-containing protein YP_004232365.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: rme:Rmet_5425 putative butyryl-CoA dehydrogenase YP_004232366.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vei:Veis_3317 LysR family transcriptional regulator YP_004232367.1 PFAM: MmgE/PrpD family protein; KEGG: rme:Rmet_5368 hypothetical protein YP_004232368.1 PFAM: alpha/beta hydrolase fold; KEGG: pol:Bpro_1863 alpha/beta hydrolase fold YP_004232369.1 KEGG: bav:BAV1823 alpha-ketoglutarate permease YP_004232370.1 KEGG: bgf:BC1003_3558 IclR family transcriptional regulator; PFAM: regulatory protein IclR; SMART: regulatory protein IclR YP_004232371.1 KEGG: bmc:BAbS19_II09070 tetracycline resistance protein TetB; manually curated; PFAM: major facilitator superfamily MFS_1 YP_004232372.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bra:BRADO3859 hypothetical protein YP_004232373.1 PFAM: major facilitator superfamily MFS_1; KEGG: hse:Hsero_4456 major facilitator superfamily permease YP_004232374.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bbr:BB3554 hypothetical protein YP_004232375.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: bgl:bglu_1g13030 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_004232376.1 PFAM: porin Gram-negative type; KEGG: bph:Bphy_6806 OmpC family outer membrane porin YP_004232377.1 manually curated; KEGG: bph:Bphy_7580 hypothetical protein YP_004232378.1 TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: tmz:Tmz1t_1497 transketolase; SMART: Transketolase central region YP_004232379.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rlt:Rleg2_4974 short-chain dehydrogenase/reductase SDR YP_004232380.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bmj:BMULJ_02561 sorbitol dehydrogenase YP_004232381.1 PFAM: extracellular solute-binding protein family 1; KEGG: bte:BTH_I0695 mannitol ABC transporter, periplasmic mannitol-binding protein YP_004232382.1 PFAM: sugar-binding domain-containing protein; KEGG: bmj:BMULJ_02550 predicted transcriptional regulator YP_004232383.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: mrb:Mrub_2057 carbohydrate kinase FGGY YP_004232384.1 KEGG: bte:BTH_II0211 ribose ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004232385.1 PFAM: inner-membrane translocator; KEGG: bam:Bamb_1424 inner-membrane translocator YP_004232386.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_II0209 ribose ABC transporter, periplasmic ribose-binding protein YP_004232387.1 KEGG: rpf:Rpic12D_4718 hypothetical protein YP_004232388.1 KEGG: apb:SAR116_2427 hypothetical protein YP_004232389.1 PFAM: Domain of unknown function DUF1917; KEGG: mla:Mlab_0649 DNA polymerase II large subunit-like protein YP_004232390.1 KEGG: apv:Apar_0632 thymidylate synthase YP_004232391.1 KEGG: bxe:Bxe_A0245 hypothetical protein YP_004232392.1 KEGG: bvi:Bcep1808_0165 hypothetical protein YP_004232393.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: bph:Bphy_6926 XRE family transcriptional regulator; SMART: helix-turn-helix domain protein YP_004232394.1 KEGG: rcu:RCOM_0029570 hypothetical protein YP_004232395.1 KEGG: rcu:RCOM_0029570 hypothetical protein YP_004232396.1 KEGG: mms:mma_1775 hypothetical protein YP_004232397.1 KEGG: tbd:Tbd_1315 hypothetical protein YP_004232398.1 KEGG: rcu:RCOM_0029460 hypothetical protein YP_004232399.1 KEGG: bac:BamMC406_4300 integrase catalytic region YP_004232400.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bmj:BMULJ_01958 putative nucleoside-diphosphate-sugar epimerase YP_004232401.1 SMART: helix-turn-helix domain protein; PAS domain containing protein; KEGG: bmj:BMULJ_01959 XRE family transcriptional regulator YP_004232402.1 PFAM: YCII-related; KEGG: bpy:Bphyt_6650 DGPFAETKE family protein YP_004232403.1 PFAM: isochorismatase hydrolase; KEGG: bph:Bphy_6682 isochorismatase hydrolase YP_004232404.1 TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: bge:BC1002_6402 dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase YP_004232405.1 KEGG: bge:BC1002_6401 dihydroxyacetone kinase, L subunit; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase YP_004232406.1 KEGG: bph:Bphy_6366 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004232407.1 KEGG: bph:Bphy_6367 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004232408.1 KEGG: bge:BC1002_6398 hypothetical protein YP_004232409.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bph:Bphy_6369 binding-protein-dependent transport systems inner membrane component YP_004232410.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bge:BC1002_6396 binding-protein-dependent transport systems inner membrane component YP_004232411.1 PFAM: extracellular solute-binding protein family 1; KEGG: bph:Bphy_6371 extracellular solute-binding protein YP_004232412.1 PFAM: regulatory protein LacI; KEGG: bge:BC1002_6394 transcriptional regulator, LacI family YP_004232413.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bge:BC1002_1563 transcriptional regulator, LysR family YP_004232414.1 KEGG: bpy:Bphyt_2119 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004232415.1 KEGG: bge:BC1002_1556 hypothetical protein YP_004232416.1 PFAM: major facilitator superfamily MFS_1; KEGG: bgf:BC1003_1106 major facilitator superfamily protein YP_004232417.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mlo:mlr3528 transcriptional regulator, GstR YP_004232418.1 KEGG: bge:BC1002_3505 hypothetical protein YP_004232419.1 KEGG: bph:Bphy_4998 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004232420.1 PFAM: secretion protein HlyD family protein; KEGG: bph:Bphy_4999 secretion protein HlyD family protein YP_004232421.1 KEGG: reu:Reut_B4488 major facilitator transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_004232422.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: bpy:Bphyt_2122 uracil-DNA glycosylase superfamily YP_004232423.1 KEGG: bpy:Bphyt_2121 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004232424.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: bge:BC1002_3240 transcriptional regulator, AraC family YP_004232425.1 SMART: regulatory protein ArsR; KEGG: bgl:bglu_2g14620 transcriptional regulator, ArsR family protein YP_004232426.1 KEGG: bge:BC1002_6104 major facilitator superfamily MFS_1; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004232427.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bgf:BC1003_1386 LysR family transcriptional regulator YP_004232428.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bgf:BC1003_3592 histone family protein nucleoid-structuring protein H-NS YP_004232429.1 PFAM: Glycoside hydrolase family 71; KEGG: bgf:BC1003_3593 glycoside hydrolase family 71 YP_004232430.1 KEGG: bgf:BC1003_3594 hypothetical protein YP_004232431.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_3595 glycosyl transferase group 1 YP_004232432.1 KEGG: bgf:BC1003_3596 hypothetical protein YP_004232433.1 PFAM: glycosyl transferase group 1; KEGG: bgf:BC1003_3597 glycosyl transferase group 1 YP_004232434.1 SMART: AAA ATPase; TIGRFAM: exopolysaccharide transport protein family; capsular exopolysaccharide family; KEGG: bgf:BC1003_3598 exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis protein YP_004232435.1 KEGG: bgf:BC1003_3599 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004232436.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bgf:BC1003_3600 polysaccharide export protein YP_004232437.1 KEGG: bgf:BC1003_3601 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_004232438.1 KEGG: bgf:BC1003_3602 hypothetical protein YP_004232439.1 PFAM: acyltransferase 3; KEGG: bgf:BC1003_3603 acyltransferase 3 YP_004232440.1 KEGG: bgf:BC1003_3604 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain-containing protein; SMART: Helix-turn-helix, AraC domain YP_004232441.1 KEGG: bgf:BC1003_3605 hypothetical protein YP_004232442.1 KEGG: bgf:BC1003_3606 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004232443.1 KEGG: bgf:BC1003_3607 hypothetical protein YP_004232444.1 PFAM: amine oxidase; KEGG: bgf:BC1003_3608 amine oxidase YP_004232445.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bgf:BC1003_3609 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004232446.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_3610 extracellular ligand-binding receptor YP_004232447.1 PFAM: inner-membrane translocator; KEGG: bgf:BC1003_3611 inner-membrane translocator YP_004232448.1 KEGG: bgf:BC1003_3612 ABC transporter-like protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase YP_004232449.1 KEGG: bgf:BC1003_3613 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004232450.1 PFAM: Amidase; KEGG: bgf:BC1003_3614 amidase YP_004232451.1 PFAM: Extracellular ligand-binding receptor; KEGG: bgf:BC1003_3615 extracellular ligand-binding receptor YP_004232452.1 PFAM: ANTAR domain protein; KEGG: bgf:BC1003_3616 ANTAR domain-containing protein with unknown sensor YP_004232453.1 KEGG: bgf:BC1003_3617 hypothetical protein YP_004232454.1 KEGG: bgf:BC1003_3618 helix-turn-helix-domain containing protein AraC type; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004232455.1 KEGG: bgf:BC1003_3619 transcriptional regulator CadC; PFAM: transcriptional regulator domain-containing protein; SMART: transcriptional regulator domain-containing protein YP_004232456.1 PFAM: Type III secretion protein HrpB1/HrpK; KEGG: bgf:BC1003_3620 type III secretion protein HrpB1/HrpK YP_004232457.1 KEGG: bgf:BC1003_3621 hypothetical protein YP_004232458.1 PFAM: cytochrome P450; KEGG: bgf:BC1003_3622 cytochrome P450 YP_004232459.1 KEGG: bgf:BC1003_3624 hypothetical protein YP_004232460.1 PFAM: Protein of unknown function DUF3455; KEGG: bgf:BC1003_3625 hypothetical protein YP_004232461.1 KEGG: bgf:BC1003_3626 hypothetical protein YP_004232462.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bgf:BC1003_3627 Rieske (2Fe-2S) iron-sulfur domain-containing protein YP_004232463.1 KEGG: bgf:BC1003_3628 winged helix family two component transcriptional regulator; PFAM: transcriptional regulator domain-containing protein; SMART: transcriptional regulator domain-containing protein YP_004232464.1 KEGG: bgf:BC1003_3629 type III secretion outer membrane pore, YscC/HrcC family; TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein YP_004232465.1 KEGG: bgf:BC1003_3630 type III secretion protein SpaR/YscT/HrcT; TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein YP_004232466.1 KEGG: bgf:BC1003_3631 type III secretion protein HrpB7; manually curated; PFAM: Type III secretion protein HrpB7 YP_004232467.1 TIGRFAM: type III secretion apparatus H+-transporting two-sector ATPase; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: bgf:BC1003_3632 type III secretion apparatus H+-transporting two-sector ATPase; SMART: AAA ATPase YP_004232468.1 KEGG: bgf:BC1003_3633 type III secretion apparatus protein, HrpE/YscL family; TIGRFAM: type III secretion apparatus protein, HrpE/YscL family; PFAM: Nodulation NolV family protein YP_004232469.1 PFAM: Type III secretion protein HrpB4; KEGG: bgl:bglu_2g02420 type III secretion protein HrpB YP_004232470.1 KEGG: bgf:BC1003_3635 type III secretion apparatus lipoprotein, YscJ/HrcJ family; TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein YP_004232471.1 KEGG: bgf:BC1003_3636 type III secretion protein HrpB2; TIGRFAM: type III secretion protein HrpB2; PFAM: Type III secretion protein HrpB2 YP_004232472.1 KEGG: bgf:BC1003_3637 type III secretion protein HrpB1/HrpK; TIGRFAM: type III secretion protein HrpB1/HrpK; PFAM: Type III secretion protein HrpB1/HrpK YP_004232473.1 KEGG: bgf:BC1003_3638 type III secretion protein, YscU/HrpY family; TIGRFAM: type III secretion protein, YscU/HrpY family; PFAM: type III secretion exporter YP_004232474.1 KEGG: bgf:BC1003_3639 type III secretion protein, HrcV family; TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein YP_004232475.1 PFAM: Type III secretion protein HpaP; KEGG: bgf:BC1003_3640 type III secretion protein HpaP YP_004232476.1 KEGG: bgf:BC1003_3641 type III secretion system apparatus protein YscQ/HrcQ; TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein YP_004232477.1 KEGG: bgf:BC1003_3642 Yop virulence translocation R; TIGRFAM: Yop virulence translocation R; PFAM: type III secretion system inner membrane P protein YP_004232478.1 KEGG: bgf:BC1003_3643 type III secretion protein, HrpO family; TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ family 3 YP_004232479.1 KEGG: bgf:BC1003_3644 hypothetical protein YP_004232480.1 KEGG: bgf:BC1003_3645 secretion-associated protein YP_004232481.1 KEGG: bgf:BC1003_3646 hypothetical protein YP_004232482.1 KEGG: bgf:BC1003_3647 triple helix repeat-containing collagen YP_004232483.1 PFAM: Tir chaperone family protein; KEGG: bgf:BC1003_3648 Tir chaperone family protein YP_004232484.1 manually curated; KEGG: bgf:BC1003_3649 hypothetical protein YP_004232485.1 KEGG: bgf:BC1003_3650 hypothetical protein YP_004232486.1 KEGG: bgf:BC1003_3651 putative awr type III effector family protein YP_004232487.1 KEGG: bgf:BC1003_3652 hypothetical protein YP_004232488.1 KEGG: bgf:BC1003_3653 alpha/beta hydrolase domain-containing protein YP_004232489.1 PFAM: Lytic transglycosylase catalytic; KEGG: bgf:BC1003_3654 lytic transglycosylase catalytic YP_004232490.1 KEGG: bgf:BC1003_3655 aliphatic sulfonates family ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_004232491.1 PFAM: selenium-binding protein; KEGG: bgf:BC1003_3656 selenium-binding protein YP_004232492.1 KEGG: bgf:BC1003_3657 hypothetical protein YP_004232493.1 PFAM: Protein of unknown function DUF2795; KEGG: bgf:BC1003_3658 hypothetical protein YP_004232494.1 KEGG: bgf:BC1003_3660 SNARE associated Golgi protein-related protein; PFAM: SNARE associated Golgi protein; phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004232495.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bgf:BC1003_3661 endonuclease/exonuclease/phosphatase