-- dump date 20140619_011504 -- class Genbank::CDS -- table cds_note -- id note YP_005613719.1 identified by match to PFAM protein family HMM PF03428; corresponds to BRA0001 YP_005613720.1 corresponds to BRA0002 YP_005613721.1 corresponds to BRA0003 YP_005613722.1 corresponds to BRA0004 YP_005613723.1 similar to GB:M77016, SP:P28289, PID:339948, GB:M77016, SP:P28289, and PID:339948; identified by sequence similarity; putative; corresponds to BRA0005 YP_005613724.1 identified by match to PFAM protein family HMM PF01156; corresponds to BRA0006 YP_005613725.1 identified by match to TIGR protein family HMM TIGR00023; corresponds to BRA0007 YP_005613726.1 similar to GP:13022200, and GP:17134506; identified by sequence similarity; putative; corresponds to BRA0008 YP_005613727.1 similar to GP:13162075, GB:X52974, SP:P40598, and PID:48736; identified by sequence similarity; putative; corresponds to BRA0009 YP_005613728.1 similar to GP:11065692; identified by sequence similarity; putative; corresponds to BRA0010 YP_005613729.1 similar to GP:15141208, and GP:15141208; identified by sequence similarity; putative; corresponds to BRA0011 YP_005613730.1 similar to GP:15158815, and GP:6018425; identified by sequence similarity; putative; corresponds to BRA0012 YP_005613731.1 catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; corresponds to BRA0013 YP_005613732.1 identified by match to PFAM protein family HMM PF00550; corresponds to BRA0014 YP_005613733.1 bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; corresponds to BRA0015 YP_005613734.1 synthesizes isochorismate acid from chorismate; corresponds to BRA0016 YP_005613735.1 similar to GP:13959028, and GP:1778502; identified by sequence similarity; putative; corresponds to BRA0017 YP_005613736.1 identified by match to PFAM protein family HMM PF00174; corresponds to BRA0018 YP_005613737.1 identified by match to PFAM protein family HMM PF01292; corresponds to BRA0019 YP_005613738.1 similar to GP:15157425, and GP:15157425; identified by sequence similarity; putative; corresponds to BRA0020 YP_005613739.1 similar to GP:15157424; identified by sequence similarity; putative; corresponds to BRA0021 YP_005613740.1 similar to GP:15157423, and GP:15157423; identified by sequence similarity; putative; corresponds to BRA0022 YP_005613741.1 similar to GP:14523197; identified by sequence similarity; putative; corresponds to BRA0023 YP_005613742.1 similar to GB:Z11566, GB:J04991, GB:X53305, GB:M31303, GB:D28428, GB:X94912, SP:P16949, PID:1246757, PID:189388, PID:189426, PID:35595, and PID:57870; identified by sequence similarity; putative; corresponds to BRA0024 YP_005613743.1 similar to GP:15076000; identified by sequence similarity; putative; corresponds to BRA0025 YP_005613744.1 similar to GB:M93015, SP:P29916, and PID:150623; identified by sequence similarity; putative; corresponds to BRA0026 YP_005613745.1 similar to GP:15159144; identified by sequence similarity; putative; corresponds to BRA0027 YP_005613746.1 similar to GB:M93015, SP:P29916, and PID:150623; identified by sequence similarity; putative; corresponds to BRA0028 YP_005613747.1 identified by match to PFAM protein family HMM PF00903; corresponds to BRA0029 YP_005613748.1 similar to GB:L13289, SP:P47721, PID:551904, GB:M11147, GB:M10119, GB:M12938, GB:X03742, GB:X03743, SP:P02792, PID:1340145, PID:1340146, PID:182514, PID:182516, PID:182518, PID:2230869, and PID:28519; identified by sequence similarity; putative; corresponds to BRA0030 YP_005613749.1 identified by match to TIGR protein family HMM TIGR01500; corresponds to BRA0031 YP_005613750.1 similar to SP:P27746, GB:X52592, and PID:46994; identified by sequence similarity; putative; corresponds to BRA0032 YP_005613751.1 identified by match to TIGR protein family HMM TIGR01348; corresponds to BRA0033 YP_005613752.1 identified by match to TIGR protein family HMM TIGR00507; corresponds to BRA0034 YP_005613753.1 corresponds to BRA0035 YP_005613754.1 corresponds to BRA0036 YP_005613755.1 similar to GP:397973; identified by sequence similarity; putative; corresponds to BRA0037 YP_005613756.1 corresponds to BRA0038 YP_005613757.1 corresponds to BRA0039 YP_005613758.1 similar to GB:L33799, and PID:642908; identified by sequence similarity; putative; corresponds to BRA0040 YP_005613759.1 similar to GB:M57423, SP:P09329, SP:P11908, SP:P21108, PID:190522, and PID:2160401; identified by sequence similarity; putative; corresponds to BRA0041 YP_005613760.1 similar to GB:L22075, SP:Q14344, and PID:404722; identified by sequence similarity; putative; corresponds to BRA0042 YP_005613761.1 identified by match to PFAM protein family HMM PF00072; corresponds to BRA0043 YP_005613762.1 corresponds to BRA0044 YP_005613763.1 identified by match to TIGR protein family HMM TIGR01330; corresponds to BRA0045 YP_005613764.1 similar to GB:X15949, SP:P14316, and PID:33967; identified by sequence similarity; putative; corresponds to BRA0046 YP_005613765.1 corresponds to BRA0047 YP_005613766.1 corresponds to BRA0048 YP_005613767.1 corresponds to BRA0049 YP_005613768.1 corresponds to BRA0050 YP_005613769.1 similar to GB:X01703, GB:K00557, SP:P04687, SP:P05215, PID:340019, PID:340021, and PID:37492; identified by sequence similarity; putative; corresponds to BRA0051 YP_005613770.1 corresponds to BRA0052 YP_005613771.1 corresponds to BRA0053 YP_005613772.1 similar to SP:P04993, GB:X04581, GB:X04582, PID:42683, PID:42691, PID:882711, GB:U00096, and PID:1789182; identified by sequence similarity; putative; corresponds to BRA0054 YP_005613773.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; corresponds to BRA0055 YP_005613774.1 similar to SP:O06005, GB:M86808, SP:P29803, and PID:190790; identified by sequence similarity; putative; corresponds to BRA0056 YP_005613775.1 similar to GP:15075833; identified by sequence similarity; putative; corresponds to BRA0057 YP_005613776.1 identified by match to PFAM protein family HMM PF00691; corresponds to BRA0058 YP_005613777.1 similar to GP:5929876, and GP:8163894; identified by sequence similarity; putative; corresponds to BRA0059 YP_005613778.1 similar to GP:5929875, and GP:5929875; identified by sequence similarity; putative; corresponds to BRA0060 YP_005613779.1 similar to GP:5929874, and GP:5929874; identified by sequence similarity; putative; corresponds to BRA0061 YP_005613780.1 similar to GP:5929873, and GP:5929873; identified by sequence similarity; putative; corresponds to BRA0062 YP_005613781.1 similar to GP:5929872; identified by sequence similarity; putative; corresponds to BRA0063 YP_005613782.1 similar to GP:8163889, and GP:8163889; identified by sequence similarity; putative; corresponds to BRA0064 YP_005613783.1 similar to GP:5929870, and GP:5929870; identified by sequence similarity; putative; corresponds to BRA0065 YP_005613784.1 similar to GP:8163887, and GP:8163887; identified by sequence similarity; putative; corresponds to BRA0066 YP_005613785.1 similar to GP:5929868, and GP:5929868; identified by sequence similarity; putative; corresponds to BRA0067 YP_005613786.1 similar to GP:5929867, and GP:5929867; identified by sequence similarity; putative; corresponds to BRA0068 YP_005613787.1 similar to GP:5929866, and GP:5929866; identified by sequence similarity; putative; corresponds to BRA0069 YP_005613788.1 identified by match to PFAM protein family HMM PF01471; corresponds to BRA0070 YP_005613789.1 identified by match to TIGR protein family HMM TIGR01208; corresponds to BRA0071 YP_005613790.1 similar to GP:14023404; identified by sequence similarity; putative; corresponds to BRA0072 YP_005613791.1 similar to GP:15159530; identified by sequence similarity; putative; corresponds to BRA0073 YP_005613792.1 corresponds to BRA0074 YP_005613793.1 similar to GP:15159532; identified by sequence similarity; putative; corresponds to BRA0075 YP_005613794.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; corresponds to BRA0076 YP_005613795.1 similar to GP:13877130, and GP:13877130; identified by sequence similarity; putative; corresponds to BRA0077 YP_005613796.1 similar to GP:2276407; identified by sequence similarity; putative; corresponds to BRA0078 YP_005613797.1 similar to GP:14023390, and GP:14023390; identified by sequence similarity; putative; corresponds to BRA0079 YP_005613798.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; corresponds to BRA0080 YP_005613799.1 identified by match to PFAM protein family HMM PF01432; corresponds to BRA0081 YP_005613800.1 similar to GP:15159542; identified by sequence similarity; putative; corresponds to BRA0082 YP_005613801.1 similar to GP:14023385; identified by sequence similarity; putative; corresponds to BRA0083 YP_005613802.1 identified by match to PFAM protein family HMM PF00581; corresponds to BRA0086 YP_005613803.1 corresponds to BRA0087 YP_005613804.1 similar to GP:15157753; identified by sequence similarity; putative; corresponds to BRA0088 YP_005613805.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; corresponds to BRA0089 YP_005613806.1 similar to SP:P09833; identified by sequence similarity; putative; corresponds to BRA0090 YP_005613807.1 identified by match to PFAM protein family HMM PF00583; corresponds to BRA0091 YP_005613808.1 corresponds to BRA0092 YP_005613809.1 corresponds to BRA0094 YP_005613810.1 identified by match to TIGR protein family HMM TIGR01598; corresponds to BRA0095 YP_005613811.1 identified by match to PFAM protein family HMM PF03741; corresponds to BRA0096 YP_005613812.1 similar to GP:15158721; identified by sequence similarity; putative; corresponds to BRA0097 YP_005613813.1 identified by match to PFAM protein family HMM PF02492; corresponds to BRA0098 YP_005613814.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; corresponds to BRA0099 YP_005613815.1 similar to SP:O50657; identified by sequence similarity; putative; corresponds to BRA0100 YP_005613816.1 similar to GP:15141223; identified by sequence similarity; putative; corresponds to BRA0101 YP_005613817.1 corresponds to BRA0102 YP_005613818.1 similar to GP:14026189; identified by sequence similarity; putative; corresponds to BRA0103 YP_005613819.1 identified by match to PFAM protein family HMM PF03808; corresponds to BRA0104 YP_005613820.1 corresponds to BRA0105 YP_005613821.1 corresponds to BRA0106 YP_005613822.1 identified by match to PFAM protein family HMM PF00535; corresponds to BRA0107 YP_005613823.1 corresponds to BRA0108 YP_005613824.1 similar to GP:15076091; identified by sequence similarity; putative; corresponds to BRA0109 YP_005613825.1 similar to GP:6469270; identified by sequence similarity; putative; corresponds to BRA0110 YP_005613826.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; corresponds to BRA0111 YP_005613827.1 similar to GP:15157291; identified by sequence similarity; putative; corresponds to BRA0112 YP_005613828.1 similar to GP:15075242, and GP:17740614; identified by sequence similarity; putative; corresponds to BRA0113 YP_005613829.1 similar to GP:15075241, and GP:17740613; identified by sequence similarity; putative; corresponds to BRA0114 YP_005613830.1 similar to GP:15075240; identified by sequence similarity; putative; corresponds to BRA0115 YP_005613831.1 identified by match to PFAM protein family HMM PF04039; corresponds to BRA0116 YP_005613832.1 identified by match to PFAM protein family HMM PF00440; corresponds to BRA0118 YP_005613833.1 similar to GP:9622950; identified by sequence similarity; putative; corresponds to BRA0119 YP_005613834.1 similar to GP:15073579, and GP:15073579; identified by sequence similarity; putative; corresponds to BRA0120 YP_005613835.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; corresponds to BRA0121 YP_005613836.1 identified by match to PFAM protein family HMM PF01052; corresponds to BRA0123 YP_005613837.1 corresponds to BRA0124 YP_005613838.1 similar to SP:O54246; identified by sequence similarity; putative; corresponds to BRA0125 YP_005613839.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; corresponds to BRA0126 YP_005613840.1 similar to GP:15155497, and GP:15073585; identified by sequence similarity; putative; corresponds to BRA0127 YP_005613841.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; corresponds to BRA0128 YP_005613842.1 involved in type III protein export during flagellum assembly; corresponds to BRA0129 YP_005613843.1 similar to GP:2916792, and GP:2459710; identified by sequence similarity; putative; corresponds to BRA0130 YP_005613844.1 identified by match to PFAM protein family HMM PF01569; corresponds to BRA0131 YP_005613845.1 corresponds to BRA0132 YP_005613846.1 corresponds to BRA0133 YP_005613847.1 identified by match to PFAM protein family HMM PF03751; corresponds to BRA0134 YP_005613848.1 similar to GB:Z17227, SP:Q08334, PID:393379, and PID:571296; identified by sequence similarity; putative; corresponds to BRA0135 YP_005613849.1 identified by match to PFAM protein family HMM PF03633; corresponds to BRA0136 YP_005613850.1 similar to GP:4433524; identified by sequence similarity; putative; corresponds to BRA0137 YP_005613851.1 corresponds to BRA0138 YP_005613852.1 similar to GP:15159134; identified by sequence similarity; putative; corresponds to BRA0139 YP_005613853.1 corresponds to BRA0140 YP_005613854.1 identified by match to PFAM protein family HMM PF01527; corresponds to BRA0141 YP_005613855.1 corresponds to BRA0142 YP_005613856.1 similar to GP:5281442, GB:U12431, SP:P26378, PID:521144, and PID:905387; identified by sequence similarity; putative; corresponds to BRA0143 YP_005613857.1 identified by match to TIGR protein family HMM TIGR00760; corresponds to BRA0144 YP_005613858.1 similar to GB:M31651, GB:M27542, GB:X16351, GB:X05403, GB:X05792, GB:X16349, GB:X16350, SP:P04278, SP:P14689, PID:1335305, PID:36452, PID:825718, GB:M31651, GB:M27542, GB:X16351, GB:X05403, GB:X05792, GB:X16349, GB:X16350, SP:P04278, SP:P14689, PID:1335305, PID:36452, and PID:825718; identified by sequence similarity; putative; corresponds to BRA0145 YP_005613859.1 similar to GB:J00222, GB:S55273, SP:P01854, PID:184760, PID:2300106, and PID:386807; identified by sequence similarity; putative; corresponds to BRA0146 YP_005613860.1 similar to GP:10197687, GB:J03799, GB:X15005, GB:S37431, GB:M14199, GB:X61156, GB:U36484, SP:P08865, PID:1125065, PID:34272, and PID:386857; identified by sequence similarity; putative; corresponds to BRA0147 YP_005613861.1 similar to GB:J00222, GB:S55273, SP:P01854, PID:184760, PID:2300106, and PID:386807; identified by sequence similarity; putative; corresponds to BRA0148 YP_005613862.1 corresponds to BRA0150 YP_005613863.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; corresponds to BRA0151 YP_005613864.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; corresponds to BRA0152 YP_005613865.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; corresponds to BRA0153 YP_005613866.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; corresponds to BRA0154 YP_005613867.1 required for the assembly of the flagellar basal body P-ring; Bradyrhizobium japonicum has two types of flagella, a single thick flagella and a few thin flagella; the protein in this cluster is associated with the thin flagella; corresponds to BRA0155 YP_005613868.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; corresponds to BRA0156 YP_005613869.1 similar to GP:12057224; identified by sequence similarity; putative; corresponds to BRA0157 YP_005613870.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; corresponds to BRA0158 YP_005613871.1 similar to GP:15073597, GB:X56253, GB:X56254, GB:X56255, GB:X56256, GB:X56257, GB:M16985, SP:P20645, PID:307147, and PID:825692; identified by sequence similarity; putative; corresponds to BRA0159 YP_005613872.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; corresponds to BRA0160 YP_005613873.1 corresponds to BRA0161 YP_005613874.1 similar to GP:15130936; identified by sequence similarity; putative; corresponds to BRA0162 YP_005613875.1 similar to GP:3419687; identified by sequence similarity; putative; corresponds to BRA0163 YP_005613876.1 identified by match to PFAM protein family HMM PF02515; corresponds to BRA0166 YP_005613877.1 identified by match to PFAM protein family HMM PF01524; corresponds to BRA0167 YP_005613878.1 identified by match to PFAM protein family HMM PF03328; corresponds to BRA0168 YP_005613879.1 corresponds to BRA0169 YP_005613880.1 similar to GB:L25675, PID:409767, and SP:P53641; identified by sequence similarity; putative; corresponds to BRA0170 YP_005613881.1 corresponds to BRA0171 YP_005613882.1 corresponds to BRA0172 YP_005613883.1 similar to GP:15162141, and GP:15162141; identified by sequence similarity; putative; corresponds to BRA0173 YP_005613884.1 similar to GB:L11566, SP:Q07020, PID:337493, GB:L11566, SP:Q07020, and PID:337493; identified by sequence similarity; putative; corresponds to BRA0174 YP_005613885.1 corresponds to BRA0175 YP_005613886.1 corresponds to BRA0176 YP_005613887.1 similar to GP:15073704; identified by sequence similarity; putative; corresponds to BRA0177 YP_005613888.1 similar to GP:15073706; identified by sequence similarity; putative; corresponds to BRA0178 YP_005613889.1 corresponds to BRA0179 YP_005613890.1 similar to SP:P32718, PID:396419, GB:U00096, and PID:1790522; identified by sequence similarity; putative; corresponds to BRA0180 YP_005613891.1 similar to GP:14026515, and SP:P52073; identified by sequence similarity; putative; corresponds to BRA0181 YP_005613892.1 similar to SP:P52074; identified by sequence similarity; putative; corresponds to BRA0182 YP_005613893.1 similar to GP:4007669; identified by sequence similarity; putative; corresponds to BRA0183 YP_005613894.1 similar to GP:15155625, and GP:15073711; identified by sequence similarity; putative; corresponds to BRA0184 YP_005613895.1 identified by match to TIGR protein family HMM TIGR00624; corresponds to BRA0185 YP_005613896.1 identified by match to TIGR protein family HMM TIGR00948; corresponds to BRA0186 YP_005613897.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; corresponds to BRA0187 YP_005613898.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; corresponds to BRA0188 YP_005613899.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; corresponds to BRA0189 YP_005613900.1 corresponds to BRA0191 YP_005613901.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; corresponds to BRA0192 YP_005613902.1 corresponds to BRA0193 YP_005613903.1 corresponds to BRA0194 YP_005613904.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; corresponds to BRA0195 YP_005613905.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; corresponds to BRA0196 YP_005613906.1 corresponds to BRA0197 YP_005613907.1 corresponds to BRA0198 YP_005613908.1 identified by match to TIGR protein family HMM TIGR01668; corresponds to BRA0199 YP_005613909.1 corresponds to BRA0200 YP_005613910.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; corresponds to BRA0201 YP_005613911.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; corresponds to BRA0202 YP_005613912.1 similar to GP:15073729; identified by sequence similarity; putative; corresponds to BRA0203 YP_005613913.1 similar to SP:P08732; identified by sequence similarity; putative; corresponds to BRA0204 YP_005613914.1 similar to GP:15155649; identified by sequence similarity; putative; corresponds to BRA0205 YP_005613915.1 corresponds to BRA0206 YP_005613916.1 identified by match to PFAM protein family HMM PF03602; corresponds to BRA0207 YP_005613917.1 identified by match to PFAM protein family HMM PF01734; corresponds to BRA0209 YP_005613918.1 similar to GP:15073737; identified by sequence similarity; putative; corresponds to BRA0210 YP_005613919.1 similar to GB:V00566, GB:J00299, GB:M29386, GB:D00411, SP:P01236, GB:U75583, PID:1620399, PID:1658518, PID:190354, PID:190356, PID:220018, PID:34211, PID:531101, and PID:531103; identified by sequence similarity; putative; corresponds to BRA0211 YP_005613920.1 identified by match to TIGR protein family HMM TIGR01330; corresponds to BRA0212 YP_005613921.1 similar to GP:15155658, and GP:15073740; identified by sequence similarity; putative; corresponds to BRA0213 YP_005613922.1 similar to GP:14027592; identified by sequence similarity; putative; corresponds to BRA0214 YP_005613923.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; corresponds to BRA0215 YP_005613924.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; corresponds to BRA0216 YP_005613925.1 similar to GP:15073746; identified by sequence similarity; putative; corresponds to BRA0217 YP_005613926.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; corresponds to BRA0218 YP_005613927.1 similar to GB:Z25795, SP:P39118, PID:397488, PID:2293136, GB:AL009126, GB:Z25795, SP:P39118, PID:397488, PID:2293136, and GB:AL009126; identified by sequence similarity; putative; corresponds to BRA0219 YP_005613928.1 similar to SP:P45857; identified by sequence similarity; putative; corresponds to BRA0220 YP_005613929.1 identified by match to PFAM protein family HMM PF01614; corresponds to BRA0221 YP_005613930.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; corresponds to BRA0222 YP_005613931.1 converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; corresponds to BRA0223 YP_005613932.1 similar to GP:14587414; identified by sequence similarity; putative; corresponds to BRA0224 YP_005613933.1 identified by match to PFAM protein family HMM PF00376; corresponds to BRA0226 YP_005613934.1 identified by match to TIGR protein family HMM TIGR01382; corresponds to BRA0227 YP_005613935.1 similar to GP:15159266; identified by sequence similarity; putative; corresponds to BRA0228 YP_005613936.1 corresponds to BRA0230 YP_005613937.1 corresponds to BRA0231 YP_005613938.1 corresponds to BRA0232 YP_005613939.1 identified by match to PFAM protein family HMM PF03929; corresponds to BRA0233 YP_005613940.1 similar to SP:P41780; identified by sequence similarity; putative; corresponds to BRA0234 YP_005613941.1 similar to GP:15073890; identified by sequence similarity; putative; corresponds to BRA0235 YP_005613942.1 similar to GP:15159282; identified by sequence similarity; putative; corresponds to BRA0236 YP_005613943.1 corresponds to BRA0237 YP_005613944.1 similar to GP:15140120; identified by sequence similarity; putative; corresponds to BRA0238 YP_005613945.1 similar to GP:15140121; identified by sequence similarity; putative; corresponds to BRA0239 YP_005613946.1 similar to GP:15140123; identified by sequence similarity; putative; corresponds to BRA0240 YP_005613947.1 corresponds to BRA0241 YP_005613948.1 corresponds to BRA0242 YP_005613949.1 identified by match to PFAM protein family HMM PF03772; corresponds to BRA0243 YP_005613950.1 similar to GP:6978955; identified by sequence similarity; putative; corresponds to BRA0244 YP_005613951.1 similar to GP:6978956, and GP:6978956; identified by sequence similarity; putative; corresponds to BRA0245 YP_005613952.1 similar to GP:6978957; identified by sequence similarity; putative; corresponds to BRA0246 YP_005613953.1 similar to GP:6978958, and GP:6978958; identified by sequence similarity; putative; corresponds to BRA0247 YP_005613954.1 similar to GP:6978959, and SP:Q51662; identified by sequence similarity; putative; corresponds to BRA0248 YP_005613955.1 similar to GP:6978960, and SP:P98008; identified by sequence similarity; putative; corresponds to BRA0249 YP_005613956.1 similar to GP:6978961, GB:U10072, SP:P98177, and PID:501087; identified by sequence similarity; putative; corresponds to BRA0250 YP_005613957.1 similar to GP:6978962, GB:K00396, GB:M10065, GB:M12529, GB:X00199, GB:Z70760, GB:X92000, SP:P02649, PID:1263123, PID:178849, PID:178851, PID:178853, PID:579590, and PID:929610; identified by sequence similarity; putative; corresponds to BRA0251 YP_005613958.1 similar to GP:14523804; identified by sequence similarity; putative; corresponds to BRA0252 YP_005613959.1 similar to GP:14523803, and GP:14523803; identified by sequence similarity; putative; corresponds to BRA0253 YP_005613960.1 similar to GP:14523802, and GP:14523802; identified by sequence similarity; putative; corresponds to BRA0254 YP_005613961.1 similar to GP:14523801, and GP:14523801; identified by sequence similarity; putative; corresponds to BRA0255 YP_005613962.1 similar to GP:15156967, and GP:15156967; identified by sequence similarity; putative; corresponds to BRA0256 YP_005613963.1 similar to GP:15074522, and GP:15074522; identified by sequence similarity; putative; corresponds to BRA0257 YP_005613964.1 identified by match to TIGR protein family HMM TIGR01409; corresponds to BRA0258 YP_005613965.1 corresponds to BRA0259 YP_005613966.1 similar to GB:J05016, SP:P13667, PID:181508, GB:J05016, SP:P13667, and PID:181508; identified by sequence similarity; putative; corresponds to BRA0260 YP_005613967.1 similar to GP:14523796, and GP:2773329; identified by sequence similarity; putative; corresponds to BRA0261 YP_005613968.1 similar to GP:6978954; identified by sequence similarity; putative; corresponds to BRA0262 YP_005613969.1 similar to GP:15140338; identified by sequence similarity; putative; corresponds to BRA0263 YP_005613970.1 corresponds to BRA0264 YP_005613971.1 similar to GP:2661681; identified by sequence similarity; putative; corresponds to BRA0265 YP_005613972.1 similar to GP:2661682, and GP:12659326; identified by sequence similarity; putative; corresponds to BRA0266 YP_005613973.1 similar to GP:2661683, and GP:2661683; identified by sequence similarity; putative; corresponds to BRA0267 YP_005613974.1 similar to GP:11036625, GB:M57506, GB:M57502, SP:P22362, PID:184506, and PID:339729; identified by sequence similarity; putative; corresponds to BRA0268 YP_005613975.1 similar to GP:15158921; identified by sequence similarity; putative; corresponds to BRA0269 YP_005613976.1 similar to GP:15158337, and GP:15158337; identified by sequence similarity; putative; corresponds to BRA0270 YP_005613977.1 similar to SP:P08500, GB:M18576, PID:551957, PID:581499, SP:P08500, GB:M18576, PID:551957, and PID:581499; identified by sequence similarity; putative; corresponds to BRA0271 YP_005613978.1 corresponds to BRA0273 YP_005613979.1 similar to GP:14523755; identified by sequence similarity; putative; corresponds to BRA0274 YP_005613980.1 reduces nitrous oxide to nitrogen; corresponds to BRA0275 YP_005613981.1 similar to SP:P19843, GB:X04803, SP:P02248, PID:1304128, PID:1490419, PID:340058, PID:340068, and PID:825728; identified by sequence similarity; putative; corresponds to BRA0276 YP_005613982.1 similar to SP:P19844, GB:X04803, SP:P02248, PID:1304128, PID:1490419, PID:340058, PID:340068, and PID:825728; identified by sequence similarity; putative; corresponds to BRA0277 YP_005613983.1 similar to GP:2177176, GB:L06175, and PID:189449; identified by sequence similarity; putative; corresponds to BRA0278 YP_005613984.1 similar to GP:2177177; identified by sequence similarity; putative; corresponds to BRA0279 YP_005613985.1 similar to GP:14523761, and GP:2177178; identified by sequence similarity; putative; corresponds to BRA0280 YP_005613986.1 similar to GP:15158856, GB:L06214, PID:153222, and PID:886941; identified by sequence similarity; putative; corresponds to BRA0281 YP_005613987.1 corresponds to BRA0282 YP_005613988.1 similar to GP:15158853, and GP:14523798; identified by sequence similarity; putative; corresponds to BRA0283 YP_005613989.1 corresponds to BRA0284 YP_005613990.1 similar to GP:15158995; identified by sequence similarity; putative; corresponds to BRA0285 YP_005613991.1 identified by match to TIGR protein family HMM TIGR00972; corresponds to BRA0286 YP_005613992.1 corresponds to BRA0287 YP_005613993.1 corresponds to BRA0288 YP_005613994.1 similar to GP:15158836; identified by sequence similarity; putative; corresponds to BRA0289 YP_005613995.1 similar to GP:15158837; identified by sequence similarity; putative; corresponds to BRA0290 YP_005613996.1 similar to GP:15158838, and GP:15158838; identified by sequence similarity; putative; corresponds to BRA0291 YP_005613997.1 similar to GP:14523816; identified by sequence similarity; putative; corresponds to BRA0292 YP_005613998.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; corresponds to BRA0293 YP_005613999.1 corresponds to BRA0294 YP_005614000.1 corresponds to BRA0295 YP_005614001.1 similar to GB:M64929, SP:Q00005, SP:Q00007, and PID:190422; identified by sequence similarity; putative; corresponds to BRA0296 YP_005614002.1 similar to GP:11344603, GB:L08239, and PID:950412; identified by sequence similarity; putative; corresponds to BRA0297 YP_005614003.1 similar to GB:D90359, GB:M73442, GB:M73444, GB:X07024, SP:P21675, and PID:29733; identified by sequence similarity; putative; corresponds to BRA0298 YP_005614004.1 similar to SP:P09152; identified by sequence similarity; putative; corresponds to BRA0299 YP_005614005.1 similar to GP:14348603; identified by sequence similarity; putative; corresponds to BRA0300 YP_005614006.1 upregulated by FixLJ/FixK under oxygen limitation; involved in regulation of genes involved in carbon and amino acid metabolism; corresponds to BRA0301 YP_005614007.1 similar to GP:5802909; identified by sequence similarity; putative; corresponds to BRA0302 YP_005614008.1 corresponds to BRA0303 YP_005614009.1 similar to GP:5802910, and GP:2828820; identified by sequence similarity; putative; corresponds to BRA0304 YP_005614010.1 similar to GP:5802911, and GP:2828821; identified by sequence similarity; putative; corresponds to BRA0305 YP_005614011.1 similar to GP:5802912, and GP:13517311; identified by sequence similarity; putative; corresponds to BRA0306 YP_005614012.1 similar to GP:5802913; identified by sequence similarity; putative; corresponds to BRA0307 YP_005614013.1 similar to GP:5802914; identified by sequence similarity; putative; corresponds to BRA0308 YP_005614014.1 similar to GP:5802915; identified by sequence similarity; putative; corresponds to BRA0309 YP_005614015.1 corresponds to BRA0310 YP_005614016.1 similar to GP:15073164, and GP:12055084; identified by sequence similarity; putative; corresponds to BRA0311 YP_005614017.1 corresponds to BRA0312 YP_005614018.1 corresponds to BRA0313 YP_005614019.1 similar to GP:1800061; identified by sequence similarity; putative; corresponds to BRA0314 YP_005614020.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; corresponds to BRA0315 YP_005614021.1 Catalyzes the rate-limiting step in dNTP synthesis; corresponds to BRA0316 YP_005614022.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; corresponds to BRA0317 YP_005614023.1 corresponds to BRA0318 YP_005614024.1 corresponds to BRA0319 YP_005614025.1 corresponds to BRA0320 YP_005614026.1 blocks the formation of polar Z-ring septums; corresponds to BRA0321 YP_005614027.1 similar to GP:15160138, and SP:P18197; identified by sequence similarity; putative; corresponds to BRA0322 YP_005614028.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; corresponds to BRA0323 YP_005614029.1 corresponds to BRA0324 YP_005614030.1 similar to GP:15159179, and GP:15159179; identified by sequence similarity; putative; corresponds to BRA0325 YP_005614031.1 similar to GP:14524112, and GP:17428750; identified by sequence similarity; putative; corresponds to BRA0326 YP_005614032.1 similar to GP:14524111; identified by sequence similarity; putative; corresponds to BRA0327 YP_005614033.1 similar to GP:14524110, and SP:P23860; identified by sequence similarity; putative; corresponds to BRA0328 YP_005614034.1 similar to GP:14524109, GB:X59932, SP:P41240, PID:30256, and PID:30315; identified by sequence similarity; putative; corresponds to BRA0329 YP_005614035.1 corresponds to BRA0330 YP_005614036.1 corresponds to BRA0331 YP_005614037.1 corresponds to BRA0332 YP_005614038.1 corresponds to BRA0333 YP_005614039.1 similar to GP:15141215; identified by sequence similarity; putative; corresponds to BRA0334 YP_005614040.1 similar to GP:14524048; identified by sequence similarity; putative; corresponds to BRA0335 YP_005614041.1 corresponds to BRA0336 YP_005614042.1 corresponds to BRA0337 YP_005614043.1 catalyzes the formation of glutamate from glutamine; corresponds to BRA0340 YP_005614044.1 inactive form; corresponds to BRA0341 YP_005614045.1 corresponds to BRA0342 YP_005614046.1 corresponds to BRA0343 YP_005614047.1 similar to SP:P77473; identified by sequence similarity; putative; corresponds to BRA0344 YP_005614048.1 corresponds to BRA0345 YP_005614049.1 identified by match to PFAM protein family HMM PF03466; corresponds to BRA0346 YP_005614050.1 similar to GP:3510759; identified by sequence similarity; putative; corresponds to BRA0347 YP_005614051.1 similar to GP:2738951, SP:P06187, GB:K03551, GB:X52093, PID:154137, and PID:47739; identified by sequence similarity; putative; corresponds to BRA0348 YP_005614052.1 similar to GP:7799513, and GP:7799513; identified by sequence similarity; putative; corresponds to BRA0349 YP_005614053.1 identified by match to PFAM protein family HMM PF03595; corresponds to BRA0350 YP_005614054.1 corresponds to BRA0351 YP_005614055.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; corresponds to BRA0352 YP_005614056.1 similar to GP:15140396; identified by sequence similarity; putative; corresponds to BRA0353 YP_005614057.1 similar to GP:4098965, and GP:4098965; identified by sequence similarity; putative; corresponds to BRA0354 YP_005614058.1 similar to SP:Q59170, GB:L08666, SP:P45880, PID:190200, and PID:190201; identified by sequence similarity; putative; corresponds to BRA0355 YP_005614059.1 similar to GP:9082308; identified by sequence similarity; putative; corresponds to BRA0356 YP_005614060.1 identified by match to PFAM protein family HMM PF02600; corresponds to BRA0357 YP_005614061.1 identified by match to TIGR protein family HMM TIGR00563; corresponds to BRA0358 YP_005614062.1 identified by match to PFAM protein family HMM PF02584; corresponds to BRA0359 YP_005614063.1 Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; corresponds to BRA0360 YP_005614064.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; corresponds to BRA0361 YP_005614065.1 identified by match to PFAM protein family HMM PF00589; corresponds to BRA0362 YP_005614066.1 similar to SP:P37447, GB:X76902, and PID:436890; identified by sequence similarity; putative; corresponds to BRA0363 YP_005614067.1 similar to GP:8117186, and GP:8117186; identified by sequence similarity; putative; corresponds to BRA0364 YP_005614068.1 corresponds to BRA0365 YP_005614069.1 similar to GB:X72841, SP:P31149, SP:Q09028, SP:Q16576, PID:1016273, and PID:297904; identified by sequence similarity; putative; corresponds to BRA0366 YP_005614070.1 corresponds to BRA0367 YP_005614071.1 similar to SP:P03833, GB:X01007, GB:X13109, GB:X16345, GB:Y00525, PID:43821, SP:P03833, GB:X01007, GB:X13109, GB:X16345, GB:Y00525, and PID:43821; identified by sequence similarity; putative; corresponds to BRA0368 YP_005614072.1 corresponds to BRA0369 YP_005614073.1 corresponds to BRA0370 YP_005614074.1 similar to GP:14523605, GB:L33243, GB:L43601, GB:L43602, GB:L43604, GB:L43605, GB:L43610, GB:L43617, GB:L43618, SP:P98161, PID:799335, PID:903758, and PID:904223; identified by sequence similarity; putative; corresponds to BRA0371 YP_005614075.1 similar to SP:P17909; identified by sequence similarity; putative; corresponds to BRA0372 YP_005614076.1 similar to GB:X62949, GB:L35249, SP:P15313, SP:P21281, PID:179563, PID:37794, PID:522193, PID:587442, GB:X62949, GB:L35249, SP:P15313, SP:P21281, PID:179563, PID:37794, PID:522193, and PID:587442; identified by sequence similarity; putative; corresponds to BRA0373 YP_005614077.1 corresponds to BRA0374 YP_005614078.1 corresponds to BRA0375 YP_005614079.1 corresponds to BRA0376 YP_005614080.1 identified by match to TIGR protein family HMM TIGR00634; corresponds to BRA0377 YP_005614081.1 corresponds to BRA0378 YP_005614082.1 similar to GB:M23326, GB:X15261, GB:X13954, PID:1049195, PID:2358067, PID:312412, PID:37046, PID:37048, PID:37298, PID:37324, and PID:540457; identified by sequence similarity; putative; corresponds to BRA0379 YP_005614083.1 corresponds to BRA0380 YP_005614084.1 similar to GB:D14695, and PID:285961; identified by sequence similarity; putative; corresponds to BRA0381 YP_005614085.1 similar to GB:M20730, SP:P16534, GB:M24197, PID:150496, and PID:150515; identified by sequence similarity; putative; corresponds to BRA0382 YP_005614086.1 similar to GP:6469262, and GP:6469262; identified by sequence similarity; putative; corresponds to BRA0383 YP_005614087.1 similar to SP:P35097, and GB:Z47792; identified by sequence similarity; putative; corresponds to BRA0384 YP_005614088.1 similar to SP:Q9AEM9; identified by sequence similarity; putative; corresponds to BRA0385 YP_005614089.1 Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation; corresponds to BRA0386 YP_005614090.1 corresponds to BRA0387 YP_005614091.1 identified by match to PFAM protein family HMM PF00067; corresponds to BRA0388 YP_005614092.1 similar to GP:14524114; identified by sequence similarity; putative; corresponds to BRA0389 YP_005614093.1 corresponds to BRA0390 YP_005614094.1 identified by match to TIGR protein family HMM TIGR00692; corresponds to BRA0391 YP_005614095.1 similar to SP:P04816, GB:L19201, SP:P32174, PID:304996, GB:U00096, and PID:1790325; identified by sequence similarity; putative; corresponds to BRA0392 YP_005614096.1 similar to GP:19715091; identified by sequence similarity; putative; corresponds to BRA0393 YP_005614097.1 similar to SP:P22731; identified by sequence similarity; putative; corresponds to BRA0395 YP_005614098.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; corresponds to BRA0396 YP_005614099.1 identified by match to PFAM protein family HMM PF00745; corresponds to BRA0397 YP_005614100.1 identified by match to PFAM protein family HMM PF00070; corresponds to BRA0398 YP_005614101.1 similar to GP:15159844; identified by sequence similarity; putative; corresponds to BRA0399 YP_005614102.1 similar to SP:P02917, GB:L19201, SP:P32174, PID:304996, GB:U00096, and PID:1790325; identified by sequence similarity; putative; corresponds to BRA0400 YP_005614103.1 similar to GP:15075876; identified by sequence similarity; putative; corresponds to BRA0401 YP_005614104.1 similar to SP:P49307; identified by sequence similarity; putative; corresponds to BRA0402 YP_005614105.1 identified by match to PFAM protein family HMM PF01408; corresponds to BRA0403 YP_005614106.1 similar to SP:P24137, GB:M88627, SP:P43334, and PID:476741; identified by sequence similarity; putative; corresponds to BRA0404 YP_005614107.1 similar to GB:M88627, SP:P43334, and PID:476741; identified by sequence similarity; putative; corresponds to BRA0405 YP_005614108.1 similar to GP:12541464; identified by sequence similarity; putative; corresponds to BRA0406 YP_005614109.1 similar to GP:15160372; identified by sequence similarity; putative; corresponds to BRA0407 YP_005614110.1 similar to GB:X07820, SP:P09238, and PID:36629; identified by sequence similarity; putative; corresponds to BRA0408 YP_005614111.1 similar to GP:15158790, and GP:6969001; identified by sequence similarity; putative; corresponds to BRA0409 YP_005614112.1 identified by match to PFAM protein family HMM PF00392; corresponds to BRA0410 YP_005614113.1 identified by match to PFAM protein family HMM PF00218; corresponds to BRA0411 YP_005614114.1 corresponds to BRA0413 YP_005614115.1 similar to GP:5478244, and GP:5478244; identified by sequence similarity; putative; corresponds to BRA0414 YP_005614116.1 similar to GP:5478243, and GP:5478243; identified by sequence similarity; putative; corresponds to BRA0415 YP_005614117.1 similar to GP:5478242, and GP:5478242; identified by sequence similarity; putative; corresponds to BRA0416 YP_005614118.1 similar to GP:5478241, GP:5478241, GB:M83667, SP:P49716, and PID:189176; identified by sequence similarity; putative; corresponds to BRA0417 YP_005614119.1 similar to GP:5478240; identified by sequence similarity; putative; corresponds to BRA0418 YP_005614120.1 similar to GP:5478239, and SP:P15527; identified by sequence similarity; putative; corresponds to BRA0419 YP_005614121.1 similar to GP:5478237, and GP:5478237; identified by sequence similarity; putative; corresponds to BRA0421 YP_005614122.1 similar to GP:5478236, and GP:5478236; identified by sequence similarity; putative; corresponds to BRA0422 YP_005614123.1 similar to GB:X70959, SP:P42459, PID:452384, GB:X70959, SP:P42459, and PID:452384; identified by sequence similarity; putative; corresponds to BRA0423 YP_005614124.1 similar to GP:5478235; identified by sequence similarity; putative; corresponds to BRA0424 YP_005614125.1 similar to GP:5478233, and GP:5478233; identified by sequence similarity; putative; corresponds to BRA0426 YP_005614126.1 similar to GP:5478232; identified by sequence similarity; putative; corresponds to BRA0427 YP_005614127.1 similar to GP:15158359, GB:J00109, GB:K03512, GB:M28637, GB:A15601, GB:K03513, GB:A11954, GB:X15943, SP:P01258, SP:P06881, PID:1340176, PID:179799, PID:179828, PID:180466, PID:296638, and PID:457134; identified by sequence similarity; putative; corresponds to BRA0428 YP_005614128.1 similar to GP:15158365; identified by sequence similarity; putative; corresponds to BRA0429 YP_005614129.1 similar to GP:15158366; identified by sequence similarity; putative; corresponds to BRA0430 YP_005614130.1 similar to GP:15158364, and GP:15158364; identified by sequence similarity; putative; corresponds to BRA0431 YP_005614131.1 similar to GP:15158361; identified by sequence similarity; putative; corresponds to BRA0432 YP_005614132.1 catalyzes the formation of 5-aminovulinate from (S)-4-amino-5-oxopentanoate; corresponds to BRA0433 YP_005614133.1 similar to GP:15158360, and GP:15158360; identified by sequence similarity; putative; corresponds to BRA0434 YP_005614134.1 similar to GP:15158370; identified by sequence similarity; putative; corresponds to BRA0435 YP_005614135.1 similar to GP:15158371, and GP:15158371; identified by sequence similarity; putative; corresponds to BRA0436 YP_005614136.1 similar to SP:P29202, and PID:148782; identified by sequence similarity; putative; corresponds to BRA0437 YP_005614137.1 similar to GP:15158375; identified by sequence similarity; putative; corresponds to BRA0438 YP_005614138.1 similar to GP:15158376; identified by sequence similarity; putative; corresponds to BRA0439 YP_005614139.1 similar to GP:15158377, and GP:6066675; identified by sequence similarity; putative; corresponds to BRA0440 YP_005614140.1 corresponds to BRA0441 YP_005614141.1 similar to GP:15160336; identified by sequence similarity; putative; corresponds to BRA0442 YP_005614142.1 similar to SP:O66131; identified by sequence similarity; putative; corresponds to BRA0443 YP_005614143.1 identified by match to PFAM protein family HMM PF04024; corresponds to BRA0444 YP_005614144.1 similar to GP:4106617; identified by sequence similarity; putative; corresponds to BRA0445 YP_005614145.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; corresponds to BRA0446 YP_005614146.1 similar to GP:15159873, and SP:P45857; identified by sequence similarity; putative; corresponds to BRA0447 YP_005614147.1 similar to GB:X03342, SP:P02433, and PID:36132; identified by sequence similarity; putative; corresponds to BRA0448 YP_005614148.1 similar to GP:9948613, GB:M29297, and SP:P20189; identified by sequence similarity; putative; corresponds to BRA0449 YP_005614149.1 similar to GB:M25667, GB:S66533, GB:S66534, GB:S66541, SP:P17677, and PID:182970; identified by sequence similarity; putative; corresponds to BRA0450 YP_005614150.1 similar to GP:14523919; identified by sequence similarity; putative; corresponds to BRA0451 YP_005614151.1 corresponds to BRA0452 YP_005614152.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; corresponds to BRA0453 YP_005614153.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); corresponds to BRA0454 YP_005614154.1 similar to GB:Z29635, SP:P46374, PID:455002, GB:Z29635, SP:P46374, and PID:455002; identified by sequence similarity; putative; corresponds to BRA0455 YP_005614155.1 identified by match to PFAM protein family HMM PF01022; corresponds to BRA0456 YP_005614156.1 similar to GP:14523677, and GP:14523677; identified by sequence similarity; putative; corresponds to BRA0457 YP_005614157.1 corresponds to BRA0458 YP_005614158.1 similar to GP:14524042; identified by sequence similarity; putative; corresponds to BRA0459 YP_005614159.1 identified by match to PFAM protein family HMM PF01594; corresponds to BRA0460 YP_005614160.1 corresponds to BRA0461 YP_005614161.1 identified by match to PFAM protein family HMM PF03130; corresponds to BRA0462 YP_005614162.1 identified by match to TIGR protein family HMM TIGR00998; corresponds to BRA0463 YP_005614163.1 similar to GP:17427173; identified by sequence similarity; putative; corresponds to BRA0465 YP_005614164.1 similar to GP:15158870, and GP:15074195; identified by sequence similarity; putative; corresponds to BRA0466 YP_005614165.1 similar to GP:13021750, and SP:Q47539; identified by sequence similarity; putative; corresponds to BRA0467 YP_005614166.1 similar to SP:P37338, GB:U00096, and PID:1789018; identified by sequence similarity; putative; corresponds to BRA0468 YP_005614167.1 identified by match to PFAM protein family HMM PF00497; corresponds to BRA0469 YP_005614168.1 similar to GP:15074065; identified by sequence similarity; putative; corresponds to BRA0471 YP_005614169.1 similar to GP:15156118; identified by sequence similarity; putative; corresponds to BRA0472 YP_005614170.1 identified by match to TIGR protein family HMM TIGR01386; corresponds to BRA0473 YP_005614171.1 similar to GP:14023190; identified by sequence similarity; putative; corresponds to BRA0474 YP_005614172.1 corresponds to BRA0475 YP_005614173.1 corresponds to BRA0476 YP_005614174.1 corresponds to BRA0477 YP_005614175.1 similar to GP:14026911; identified by sequence similarity; putative; corresponds to BRA0478 YP_005614176.1 similar to GP:15075101; identified by sequence similarity; putative; corresponds to BRA0479 YP_005614177.1 similar to GP:15155841; identified by sequence similarity; putative; corresponds to BRA0480 YP_005614178.1 similar to GP:15075862; identified by sequence similarity; putative; corresponds to BRA0481 YP_005614179.1 corresponds to BRA0482 YP_005614180.1 similar to GP:15074955; identified by sequence similarity; putative; corresponds to BRA0483 YP_005614182.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; corresponds to BRA0486 YP_005614183.1 similar to GP:15140555; identified by sequence similarity; putative; corresponds to BRA0487 YP_005614184.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; corresponds to BRA0488 YP_005614185.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; corresponds to BRA0489 YP_005614186.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; corresponds to BRA0490 YP_005614187.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; corresponds to BRA0491 YP_005614188.1 similar to GB:L05091, GB:U58682, SP:P25112, PID:1518637, and PID:337403; identified by sequence similarity; putative; corresponds to BRA0492 YP_005614189.1 corresponds to BRA0493 YP_005614190.1 corresponds to BRA0494 YP_005614191.1 corresponds to BRA0495 YP_005614192.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; corresponds to BRA0496 YP_005614193.1 corresponds to BRA0497 YP_005614194.1 corresponds to BRA0498 YP_005614195.1 identified by match to PFAM protein family HMM PF00070; corresponds to BRA0499 YP_005614196.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; corresponds to BRA0500 YP_005614197.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; corresponds to BRA0501 YP_005614198.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; corresponds to BRA0502 YP_005614199.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; corresponds to BRA0503 YP_005614200.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; corresponds to BRA0504 YP_005614201.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; corresponds to BRA0505 YP_005614202.1 corresponds to BRA0506 YP_005614203.1 similar to GP:15159185, GB:Z27502, GB:Z29983, SP:P04438, PID:1335182, PID:32878, PID:474960, PID:505435, and PID:563647; identified by sequence similarity; putative; corresponds to BRA0507 YP_005614204.1 similar to GP:9858820, GB:M24400, SP:P17538, and PID:181190; identified by sequence similarity; putative; corresponds to BRA0508 YP_005614205.1 similar to GP:9858821; identified by sequence similarity; putative; corresponds to BRA0509 YP_005614206.1 similar to GP:9858822, and SP:P11026; identified by sequence similarity; putative; corresponds to BRA0510 YP_005614207.1 similar to GB:X59066, GB:X65460, GB:D28126, GB:D14710, SP:P25705, PID:28938, PID:34468, PID:559317, and PID:559325; identified by sequence similarity; putative; corresponds to BRA0511 YP_005614208.1 similar to SP:P30858, GB:X86160, PID:769790, GB:U00096, PID:1651397, and PID:1787089; identified by sequence similarity; putative; corresponds to BRA0512 YP_005614209.1 similar to GP:15073129; identified by sequence similarity; putative; corresponds to BRA0513 YP_005614210.1 similar to GP:15073128, and GP:15073128; identified by sequence similarity; putative; corresponds to BRA0514 YP_005614211.1 corresponds to BRA0515 YP_005614212.1 similar to GP:15073126, and SP:Q00749; identified by sequence similarity; putative; corresponds to BRA0516 YP_005614213.1 corresponds to BRA0517 YP_005614214.1 similar to GP:15073125, and SP:P29823; identified by sequence similarity; putative; corresponds to BRA0518 YP_005614215.1 similar to GP:15073124; identified by sequence similarity; putative; corresponds to BRA0519 YP_005614216.1 similar to GP:15073123; identified by sequence similarity; putative; corresponds to BRA0520 YP_005614217.1 similar to GP:15073122, and SP:Q01937; identified by sequence similarity; putative; corresponds to BRA0521 YP_005614218.1 corresponds to BRA0522 YP_005614219.1 similar to GP:15075957, and SP:P09060; identified by sequence similarity; putative; corresponds to BRA0524 YP_005614220.1 identified by match to PFAM protein family HMM PF02780; corresponds to BRA0525 YP_005614221.1 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; corresponds to BRA0526 YP_005614222.1 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; corresponds to BRA0527 YP_005614223.1 identified by match to PFAM protein family HMM PF02104; corresponds to BRA0528 YP_005614224.1 corresponds to BRA0529 YP_005614225.1 similar to GB:L07807, GB:L07810, GB:L07808, GB:L07809, SP:Q05193, PID:181849, and PID:181851; identified by sequence similarity; putative; corresponds to BRA0530 YP_005614226.1 identified by match to PFAM protein family HMM PF03576; corresponds to BRA0531 YP_005614227.1 similar to GP:15157414; identified by sequence similarity; putative; corresponds to BRA0532 YP_005614228.1 similar to GB:J05175, SP:P16442, PID:1783208, PID:1783212, PID:1783214, PID:1783218, PID:1783226, PID:2352626, PID:340078, and PID:992596; identified by sequence similarity; putative; corresponds to BRA0533 YP_005614229.1 similar to GP:15158999; identified by sequence similarity; putative; corresponds to BRA0534 YP_005614230.1 similar to GP:15140749; identified by sequence similarity; putative; corresponds to BRA0535 YP_005614231.1 similar to GP:15158997, and SP:P24138; identified by sequence similarity; putative; corresponds to BRA0536 YP_005614232.1 similar to GP:13235555, and SP:P77348; identified by sequence similarity; putative; corresponds to BRA0537 YP_005614233.1 similar to GP:15158996, and SP:P06202; identified by sequence similarity; putative; corresponds to BRA0538 YP_005614234.1 corresponds to BRA0539 YP_005614235.1 similar to GP:15074850; identified by sequence similarity; putative; corresponds to BRA0540 YP_005614236.1 corresponds to BRA0541 YP_005614237.1 similar to GP:15140313; identified by sequence similarity; putative; corresponds to BRA0542 YP_005614238.1 similar to SP:P23157, GB:X55942, and PID:46921; identified by sequence similarity; putative; corresponds to BRA0543 YP_005614239.1 similar to GP:15140315; identified by sequence similarity; putative; corresponds to BRA0544 YP_005614240.1 identified by match to TIGR protein family HMM TIGR00745; corresponds to BRA0545 YP_005614241.1 similar to GP:15140316, and GP:15140316; identified by sequence similarity; putative; corresponds to BRA0546 YP_005614242.1 similar to GP:15140317; identified by sequence similarity; putative; corresponds to BRA0547 YP_005614243.1 similar to GP:15140318, and GP:15140318; identified by sequence similarity; putative; corresponds to BRA0548 YP_005614244.1 similar to GP:15160059; identified by sequence similarity; putative; corresponds to BRA0549 YP_005614245.1 identified by match to PFAM protein family HMM PF00165; corresponds to BRA0550 YP_005614246.1 similar to GB:X07282, SP:P10826, PID:184477, PID:32026, PID:35883, GB:D38554, PID:1354931, and PID:559705; identified by sequence similarity; putative; corresponds to BRA0552 YP_005614247.1 identified by match to PFAM protein family HMM PF02566; corresponds to BRA0553 YP_005614248.1 similar to SP:P14040, GB:X15970, and PID:44784; identified by sequence similarity; putative; corresponds to BRA0555 YP_005614249.1 similar to GP:15140549, SP:P37811, GB:Z28592, PID:433988, and GB:AL009126; identified by sequence similarity; putative; corresponds to BRA0556 YP_005614250.1 similar to GP:15076151, SP:P37811, GB:Z28592, PID:433988, and GB:AL009126; identified by sequence similarity; putative; corresponds to BRA0557 YP_005614251.1 similar to GP:15076150, and GP:15076150; identified by sequence similarity; putative; corresponds to BRA0558 YP_005614252.1 corresponds to BRA0560 YP_005614253.1 identified by match to TIGR protein family HMM TIGR00011; corresponds to BRA0561 YP_005614254.1 rhizobial iron regulator; in Sinorhizobium meliloti mutations in this gene affect the expression of a number of iron-responsive operons; corresponds to BRA0562 YP_005614255.1 similar to GP:13277326, and GP:13277326; identified by sequence similarity; putative; corresponds to BRA0563 YP_005614256.1 similar to GP:15076196; identified by sequence similarity; putative; corresponds to BRA0564 YP_005614257.1 similar to SP:P22759; identified by sequence similarity; putative; corresponds to BRA0565 YP_005614258.1 identified by match to PFAM protein family HMM PF00919; corresponds to BRA0566 YP_005614259.1 similar to GP:15156897; identified by sequence similarity; putative; corresponds to BRA0567 YP_005614260.1 similar to GP:15156898; identified by sequence similarity; putative; corresponds to BRA0568 YP_005614261.1 similar to GP:13937515; identified by sequence similarity; putative; corresponds to BRA0569 YP_005614262.1 similar to GP:13937516; identified by sequence similarity; putative; corresponds to BRA0570 YP_005614263.1 similar to GP:15074605; identified by sequence similarity; putative; corresponds to BRA0571 YP_005614264.1 similar to GP:6739568; identified by sequence similarity; putative; corresponds to BRA0572 YP_005614265.1 similar to SP:P25534; identified by sequence similarity; putative; corresponds to BRA0573 YP_005614266.1 similar to GP:15074574; identified by sequence similarity; putative; corresponds to BRA0574 YP_005614267.1 similar to GP:14021474; identified by sequence similarity; putative; corresponds to BRA0575 YP_005614268.1 similar to GP:15074576; identified by sequence similarity; putative; corresponds to BRA0576 YP_005614269.1 identified by match to PFAM protein family HMM PF03046; corresponds to BRA0577 YP_005614270.1 identified by match to PFAM protein family HMM PF00903; corresponds to BRA0578 YP_005614271.1 identified by match to TIGR protein family HMM TIGR01587; corresponds to BRA0579 YP_005614272.1 similar to GP:15074586, and GP:15074586; identified by sequence similarity; putative; corresponds to BRA0580 YP_005614273.1 catalyzes branch migration in Holliday junction intermediates; corresponds to BRA0581 YP_005614274.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; corresponds to BRA0582 YP_005614275.1 similar to GB:K03195, SP:P11166, and PID:183303; identified by sequence similarity; putative; corresponds to BRA0583 YP_005614276.1 similar to GP:6714962; identified by sequence similarity; putative; corresponds to BRA0584 YP_005614277.1 similar to GP:15074112; identified by sequence similarity; putative; corresponds to BRA0585 YP_005614278.1 similar to GP:15157711, and GP:1196970; identified by sequence similarity; putative; corresponds to BRA0586 YP_005614279.1 similar to GP:3236220; identified by sequence similarity; putative; corresponds to BRA0587 YP_005614280.1 identified by match to PFAM protein family HMM PF00989; corresponds to BRA0588 YP_005614281.1 lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferse; lipoate-protein ligase B; transfers lipoate to apolipoproteins; involved in lipoate metabolism; corresponds to BRA0589 YP_005614282.1 similar to GP:15156645; identified by sequence similarity; putative; corresponds to BRA0590 YP_005614283.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; corresponds to BRA0591 YP_005614284.1 corresponds to BRA0592 YP_005614285.1 corresponds to BRA0593 YP_005614286.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; corresponds to BRA0594 YP_005614287.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; corresponds to BRA0595 YP_005614288.1 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; corresponds to BRA0596 YP_005614289.1 similar to GP:15156369, and GP:15074241; identified by sequence similarity; putative; corresponds to BRA0597 YP_005614290.1 identified by match to PFAM protein family HMM PF02771; corresponds to BRA0598 YP_005614291.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; corresponds to BRA0599 YP_005614292.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; corresponds to BRA0600 YP_005614293.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; corresponds to BRA0601 YP_005614294.1 similar to GP:15156358; identified by sequence similarity; putative; corresponds to BRA0602 YP_005614295.1 corresponds to BRA0603 YP_005614296.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; corresponds to BRA0604 YP_005614297.1 similar to SP:P21499; identified by sequence similarity; putative; corresponds to BRA0605 YP_005614298.1 corresponds to BRA0606 YP_005614299.1 similar to GP:6525218; identified by sequence similarity; putative; corresponds to BRA0607 YP_005614300.1 similar to GP:6525219; identified by sequence similarity; putative; corresponds to BRA0608 YP_005614301.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; corresponds to BRA0609 YP_005614302.1 involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; corresponds to BRA0610 YP_005614303.1 corresponds to BRA0611 YP_005614304.1 similar to GP:6513589; identified by sequence similarity; putative; corresponds to BRA0612 YP_005614305.1 similar to GP:15074224; identified by sequence similarity; putative; corresponds to BRA0613 YP_005614306.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; corresponds to BRA0614 YP_005614307.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; corresponds to BRA0615 YP_005614308.1 similar to GP:15156313, and GP:15074191; identified by sequence similarity; putative; corresponds to BRA0616 YP_005614309.1 corresponds to BRA0617 YP_005614310.1 identified by match to TIGR protein family HMM TIGR00254; corresponds to BRA0618 YP_005614311.1 corresponds to BRA0619 YP_005614312.1 corresponds to BRA0620 YP_005614313.1 similar to SP:P09795, and PID:154350; identified by sequence similarity; putative; corresponds to BRA0621 YP_005614314.1 corresponds to BRA0622 YP_005614315.1 corresponds to BRA0623 YP_005614316.1 corresponds to BRA0625 YP_005614317.1 identified by match to TIGR protein family HMM TIGR01406; corresponds to BRA0626 YP_005614318.1 similar to GP:15074546, and GP:15074546; identified by sequence similarity; putative; corresponds to BRA0627 YP_005614319.1 identified by match to PFAM protein family HMM PF00165; corresponds to BRA0628 YP_005614320.1 corresponds to BRA0629 YP_005614321.1 similar to GP:15073672, and SP:Q98B75; identified by sequence similarity; putative; corresponds to BRA0630 YP_005614322.1 similar to SP:P33548, PID:155324, and PID:155328; identified by sequence similarity; putative; corresponds to BRA0631 YP_005614323.1 similar to SP:P33548, PID:155324, and PID:155328; identified by sequence similarity; putative; corresponds to BRA0632 YP_005614324.1 identified by match to PFAM protein family HMM PF00899; corresponds to BRA0633 YP_005614325.1 identified by match to PFAM protein family HMM PF01047; corresponds to BRA0634 YP_005614326.1 identified by match to TIGR protein family HMM TIGR01409; corresponds to BRA0635 YP_005614327.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; corresponds to BRA0636 YP_005614328.1 similar to GP:15158666, and SP:Q01104; identified by sequence similarity; putative; corresponds to BRA0637 YP_005614329.1 similar to GP:15158667, and SP:Q01103; identified by sequence similarity; putative; corresponds to BRA0638 YP_005614330.1 similar to GP:15141386; identified by sequence similarity; putative; corresponds to BRA0639 YP_005614331.1 similar to GP:6682325; identified by sequence similarity; putative; corresponds to BRA0640 YP_005614332.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; corresponds to BRA0641 YP_005614333.1 similar to GP:15141380, GB:D21235, SP:P54725, PID:1905912, and PID:498146; identified by sequence similarity; putative; corresponds to BRA0642 YP_005614334.1 similar to GP:15141379, and SP:P00632; identified by sequence similarity; putative; corresponds to BRA0643 YP_005614335.1 similar to GP:15141378; identified by sequence similarity; putative; corresponds to BRA0644 YP_005614336.1 similar to GP:11037223, and SP:P00437; identified by sequence similarity; putative; corresponds to BRA0645 YP_005614337.1 similar to GP:11037224, GB:M12783, GB:X02811, GB:M19719, GB:X03702, GB:K01918, GB:X03493, GB:Y00389, GB:K01402, GB:X02745, GB:K01399, GB:X00560, GB:K01915, GB:K01917, GB:K01401, GB:X00562, GB:K01916, GB:K01400, GB:X00561, GB:K01913, GB:K01914, GB:J00121, GB:K01398, GB:X02744, GB:M32009, SP:P01127, PID:1335308, PID:1335309, PID:1335310, PID:1335311, PID:1621242, PID:1888419, PID:2294400, PID:2294421, PID:2294425, PID:2297379, PID:30247, PID:338199, PID:338209, PID:338211, PID:35372, PID:35375, PID:35377, PID:36481, and PID:951025; identified by sequence similarity; putative; corresponds to BRA0646 YP_005614338.1 Catalyzes the cycloisomerization of cis,cis-muconate; corresponds to BRA0647 YP_005614339.1 similar to GP:15158698; identified by sequence similarity; putative; corresponds to BRA0648 YP_005614340.1 similar to GP:15158699; identified by sequence similarity; putative; corresponds to BRA0649 YP_005614341.1 similar to GP:15158700; identified by sequence similarity; putative; corresponds to BRA0650 YP_005614342.1 similar to GP:15158701; identified by sequence similarity; putative; corresponds to BRA0651 YP_005614343.1 similar to GP:15158702; identified by sequence similarity; putative; corresponds to BRA0652 YP_005614344.1 similar to GB:Y00636, GB:X06296, SP:P19256, PID:34347, PID:34350, and PID:540515; identified by sequence similarity; putative; corresponds to BRA0653 YP_005614345.1 similar to GP:15157708; identified by sequence similarity; putative; corresponds to BRA0654 YP_005614346.1 similar to GP:15140275, and GP:43244; identified by sequence similarity; putative; corresponds to BRA0655 YP_005614347.1 similar to GP:15140276; identified by sequence similarity; putative; corresponds to BRA0656 YP_005614348.1 similar to GP:15160208; identified by sequence similarity; putative; corresponds to BRA0657 YP_005614349.1 part of the UgpABCE glycerol-3-phosphate uptake system; corresponds to BRA0658 YP_005614350.1 similar to GP:15075030; identified by sequence similarity; putative; corresponds to BRA0659 YP_005614351.1 similar to GP:15074401; identified by sequence similarity; putative; corresponds to BRA0660 YP_005614352.1 similar to GP:15140670; identified by sequence similarity; putative; corresponds to BRA0661 YP_005614353.1 corresponds to BRA0662 YP_005614354.1 corresponds to BRA0664 YP_005614355.1 similar to GP:15073153; identified by sequence similarity; putative; corresponds to BRA0665 YP_005614356.1 similar to GP:15156879; identified by sequence similarity; putative; corresponds to BRA0666 YP_005614357.1 corresponds to BRA0668 YP_005614358.1 identified by match to PFAM protein family HMM PF03647; corresponds to BRA0669 YP_005614359.1 proposed role in polysaccahride synthesis; corresponds to BRA0670 YP_005614360.1 corresponds to BRA0671 YP_005614361.1 similar to GP:15075528; identified by sequence similarity; putative; corresponds to BRA0673 YP_005614362.1 corresponds to BRA0674 YP_005614363.1 similar to GP:15157658, and SP:P15028; identified by sequence similarity; putative; corresponds to BRA0675 YP_005614364.1 similar to GP:15157659, and SP:P37738; identified by sequence similarity; putative; corresponds to BRA0676 YP_005614365.1 similar to GP:15157660, and SP:P37737; identified by sequence similarity; putative; corresponds to BRA0677 YP_005614366.1 similar to GP:15157661, and GP:15023678; identified by sequence similarity; putative; corresponds to BRA0678 YP_005614367.1 similar to GP:14023727; identified by sequence similarity; putative; corresponds to BRA0679 YP_005614368.1 corresponds to BRA0680 YP_005614369.1 similar to GP:15139898; identified by sequence similarity; putative; corresponds to BRA0681 YP_005614370.1 similar to GP:15076300; identified by sequence similarity; putative; corresponds to BRA0682 YP_005614371.1 similar to GP:15076302; identified by sequence similarity; putative; corresponds to BRA0683 YP_005614372.1 similar to GP:15076303, GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, PID:458555, GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, PID:458555, GB:J00128, GB:M58569, GB:M64982, GB:J00127, GB:K02272, GB:M26878, SP:P02671, GB:S82092, PID:182407, PID:182424, PID:182426, PID:182428, PID:458554, and PID:458555; identified by sequence similarity; putative; corresponds to BRA0684 YP_005614373.1 identified by match to TIGR protein family HMM TIGR01622; corresponds to BRA0685 YP_005614374.1 identified by match to TIGR protein family HMM TIGR00438; corresponds to BRA0686 YP_005614375.1 identified by match to TIGR protein family HMM TIGR00897; corresponds to BRA0687 YP_005614376.1 corresponds to BRA0688 YP_005614377.1 corresponds to BRA0689 YP_005614378.1 similar to GP:15076325; identified by sequence similarity; putative; corresponds to BRA0691 YP_005614379.1 similar to GP:13936895, and GP:2828821; identified by sequence similarity; putative; corresponds to BRA0692 YP_005614380.1 similar to GP:9964068, GB:L19113, SP:P39143, PID:437318, and GB:AL009126; identified by sequence similarity; putative; corresponds to BRA0693 YP_005614381.1 corresponds to BRA0694 YP_005614382.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; corresponds to BRA0695 YP_005614383.1 identified by match to TIGR protein family HMM TIGR01244; corresponds to BRA0697 YP_005614384.1 corresponds to BRA0698 YP_005614385.1 similar to GP:15155325, and SP:P71338; identified by sequence similarity; putative; corresponds to BRA0699 YP_005614386.1 similar to GP:15155324, and SP:P35755; identified by sequence similarity; putative; corresponds to BRA0700 YP_005614387.1 similar to GP:15155323; identified by sequence similarity; putative; corresponds to BRA0701 YP_005614388.1 similar to GP:15075956; identified by sequence similarity; putative; corresponds to BRA0702 YP_005614389.1 similar to GB:M92844, GB:M63625, GB:M92843, SP:P26651, PID:183443, PID:183445, PID:340013, SP:P20922, and PID:581487; identified by sequence similarity; putative; corresponds to BRA0703 YP_005614390.1 laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; corresponds to BRA0704 YP_005614391.1 corresponds to BRA0705 YP_005614392.1 similar to GP:15075195; identified by sequence similarity; putative; corresponds to BRA0706 YP_005614393.1 similar to GP:12620484; identified by sequence similarity; putative; corresponds to BRA0707 YP_005614394.1 similar to GP:12620485, and GP:12620485; identified by sequence similarity; putative; corresponds to BRA0708 YP_005614395.1 similar to GB:L04510, SP:P36406, and PID:292070; identified by sequence similarity; putative; corresponds to BRA0709 YP_005614396.1 similar to GP:15159268, SP:P07002, GB:X66086, PID:42457, GB:U00096, PID:1742636, PID:1742642, PID:1742653, and PID:1787886; identified by sequence similarity; putative; corresponds to BRA0710 YP_005614397.1 similar to GP:15159273, and SP:O68965; identified by sequence similarity; putative; corresponds to BRA0711 YP_005614398.1 similar to GP:15158705; identified by sequence similarity; putative; corresponds to BRA0712 YP_005614399.1 similar to GP:15158707, and GP:7209271; identified by sequence similarity; putative; corresponds to BRA0714 YP_005614400.1 similar to GP:15158708; identified by sequence similarity; putative; corresponds to BRA0715 YP_005614401.1 similar to GP:15140221, GB:X56692, GB:M11725, GB:M11880, GB:M35163, SP:P02741, PID:181066, PID:181068, PID:181073, and PID:30213; identified by sequence similarity; putative; corresponds to BRA0717 YP_005614402.1 similar to GP:15140222; identified by sequence similarity; putative; corresponds to BRA0718 YP_005614403.1 similar to GP:15158391, and GP:17743296; identified by sequence similarity; putative; corresponds to BRA0719 YP_005614404.1 similar to GP:15140224; identified by sequence similarity; putative; corresponds to BRA0720 YP_005614405.1 corresponds to BRA0721 YP_005614406.1 corresponds to BRA0722 YP_005614407.1 similar to GB:M64551, SP:P26514, PID:153527, GB:M64551, SP:P26514, and PID:153527; identified by sequence similarity; putative; corresponds to BRA0723 YP_005614408.1 corresponds to BRA0724 YP_005614409.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; corresponds to BRA0725 YP_005614410.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; corresponds to BRA0726 YP_005614411.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; corresponds to BRA0727 YP_005614412.1 similar to GP:15074478; identified by sequence similarity; putative; corresponds to BRA0728 YP_005614413.1 identified by match to TIGR protein family HMM TIGR01424; corresponds to BRA0729 YP_005614414.1 similar to GP:15024826; identified by sequence similarity; putative; corresponds to BRA0730 YP_005614415.1 corresponds to BRA0731 YP_005614416.1 identified by match to PFAM protein family HMM PF00120; corresponds to BRA0732 YP_005614417.1 corresponds to BRA0733 YP_005614418.1 similar to GB:M33308, SP:P18206, PID:292902, and PID:340237; identified by sequence similarity; putative; corresponds to BRA0734 YP_005614419.1 similar to GP:3236220, and GP:3236220; identified by sequence similarity; putative; corresponds to BRA0735 YP_005614420.1 corresponds to BRA0736 YP_005614421.1 similar to GP:15075527; identified by sequence similarity; putative; corresponds to BRA0737 YP_005614422.1 similar to GP:19747452; identified by sequence similarity; putative; corresponds to BRA0738 YP_005614423.1 similar to GP:6119662, and GP:6119854; identified by sequence similarity; putative; corresponds to BRA0739 YP_005614424.1 similar to SP:P46920, GB:M88282, SP:P40200, and PID:338672; identified by sequence similarity; putative; corresponds to BRA0740 YP_005614425.1 corresponds to BRA0741 YP_005614426.1 corresponds to BRA0742 YP_005614427.1 similar to GP:15140598; identified by sequence similarity; putative; corresponds to BRA0743 YP_005614428.1 identified by match to TIGR protein family HMM TIGR00441; corresponds to BRA0744 YP_005614429.1 similar to SP:P55604; identified by sequence similarity; putative; corresponds to BRA0745 YP_005614430.1 similar to GP:14024269; identified by sequence similarity; putative; corresponds to BRA0746 YP_005614431.1 corresponds to BRA0747 YP_005614432.1 similar to GP:2828820; identified by sequence similarity; putative; corresponds to BRA0748 YP_005614433.1 similar to GP:2828821; identified by sequence similarity; putative; corresponds to BRA0749 YP_005614434.1 identified by match to TIGR protein family HMM TIGR00969; corresponds to BRA0750 YP_005614435.1 identified by match to TIGR protein family HMM TIGR00004; corresponds to BRA0751 YP_005614436.1 corresponds to BRA0752 YP_005614437.1 corresponds to BRA0753 YP_005614438.1 similar to GP:15139930, and GP:8217385; identified by sequence similarity; putative; corresponds to BRA0754 YP_005614439.1 similar to GP:15139929; identified by sequence similarity; putative; corresponds to BRA0755 YP_005614440.1 similar to GP:15159961, and GP:8546929; identified by sequence similarity; putative; corresponds to BRA0756 YP_005614441.1 corresponds to BRA0757 YP_005614442.1 similar to GP:15162366; identified by sequence similarity; putative; corresponds to BRA0758 YP_005614443.1 similar to GB:M23114, GB:M23116, GB:M23278, GB:M23115, SP:P16614, SP:P16615, PID:306850, PID:306851, PID:567108, GB:M23114, GB:M23116, GB:M23278, GB:M23115, SP:P16614, SP:P16615, PID:306850, PID:306851, and PID:567108; identified by sequence similarity; putative; corresponds to BRA0759 YP_005614444.1 similar to GP:15162367; identified by sequence similarity; putative; corresponds to BRA0760 YP_005614445.1 similar to GP:15074064; identified by sequence similarity; putative; corresponds to BRA0761 YP_005614446.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; corresponds to BRA0762 YP_005614447.1 identified by match to TIGR protein family HMM TIGR01436; corresponds to BRA0763 YP_005614448.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; corresponds to BRA0764 YP_005614449.1 identified by match to PFAM protein family HMM PF00126; corresponds to BRA0765 YP_005614450.1 corresponds to BRA0766 YP_005614451.1 corresponds to BRA0767 YP_005614452.1 identified by match to PFAM protein family HMM PF00120; corresponds to BRA0768 YP_005614453.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; corresponds to BRA0769 YP_005614454.1 similar to SP:Q9Z3S3; identified by sequence similarity; putative; corresponds to BRA0770 YP_005614455.1 identified by match to PFAM protein family HMM PF01047; corresponds to BRA0771 YP_005614456.1 corresponds to BRA0772 YP_005614457.1 identified by match to PFAM protein family HMM PF01037; corresponds to BRA0773 YP_005614458.1 similar to SP:O07942; identified by sequence similarity; putative; corresponds to BRA0774 YP_005614459.1 corresponds to BRA0775 YP_005614460.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; corresponds to BRA0777 YP_005614461.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; corresponds to BRA0778 YP_005614462.1 catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1,5-lactone; corresponds to BRA0779 YP_005614463.1 identified by match to PFAM protein family HMM PF00763; corresponds to BRA0781 YP_005614464.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; corresponds to BRA0782 YP_005614465.1 similar to SP:Q53192; identified by sequence similarity; putative; corresponds to BRA0784 YP_005614466.1 similar to SP:Q53191; identified by sequence similarity; putative; corresponds to BRA0785 YP_005614467.1 similar to GP:17741829; identified by sequence similarity; putative; corresponds to BRA0786 YP_005614468.1 similar to GP:15141400, and GP:15141400; identified by sequence similarity; putative; corresponds to BRA0787 YP_005614469.1 similar to GP:14277936; identified by sequence similarity; putative; corresponds to BRA0788 YP_005614470.1 identified by match to PFAM protein family HMM PF03794; corresponds to BRA0789 YP_005614471.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; corresponds to BRA0790 YP_005614472.1 similar to GP:14025443; identified by sequence similarity; putative; corresponds to BRA0791 YP_005614473.1 similar to GP:15155410; identified by sequence similarity; putative; corresponds to BRA0792 YP_005614474.1 similar to GB:X65488, SP:Q00839, PID:32358, and PID:532037; identified by sequence similarity; putative; corresponds to BRA0793 YP_005614475.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; corresponds to BRA0794 YP_005614476.1 identified by match to PFAM protein family HMM PF02771; corresponds to BRA0795 YP_005614477.1 corresponds to BRA0796 YP_005614478.1 corresponds to BRA0797 YP_005614479.1 identified by match to PFAM protein family HMM PF02771; corresponds to BRA0799 YP_005614480.1 with NikABCD is involved with nickel transport into the cell; corresponds to BRA0800 YP_005614481.1 with NikABCE is involved in nickel transport into the cell; corresponds to BRA0801 YP_005614482.1 with NikABDE is involved in nickel transport into the cell; corresponds to BRA0802 YP_005614483.1 with NikACDE is involved in nickel transport into the cell; corresponds to BRA0803 YP_005614484.1 similar to GP:12331180, and GP:12331180; identified by sequence similarity; putative; corresponds to BRA0804 YP_005614485.1 Inhibits transcription at high concentrations of nickel; corresponds to BRA0805 YP_005614486.1 similar to GP:15158051, GB:M25393, SP:P17706, and PID:804750; identified by sequence similarity; putative; corresponds to BRA0806 YP_005614487.1 similar to GB:U12770, GB:U12774, GB:U12775, GB:L37019, SP:P42127, PID:540073, and PID:608648; identified by sequence similarity; putative; corresponds to BRA0807 YP_005614488.1 similar to GP:9501758; identified by sequence similarity; putative; corresponds to BRA0809 YP_005614489.1 identified by match to TIGR protein family HMM TIGR01409; corresponds to BRA0810 YP_005614490.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; corresponds to BRA0812 YP_005614491.1 identified by match to PFAM protein family HMM PF00392; corresponds to BRA0813 YP_005614492.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; corresponds to BRA0814 YP_005614493.1 identified by match to TIGR protein family HMM TIGR00998; corresponds to BRA0816 YP_005614494.1 similar to GP:15074323; identified by sequence similarity; putative; corresponds to BRA0817 YP_005614495.1 similar to GP:15074323; identified by sequence similarity; putative; corresponds to BRA0818 YP_005614496.1 identified by match to PFAM protein family HMM PF02641; corresponds to BRA0819 YP_005614497.1 identified by match to PFAM protein family HMM PF00376; corresponds to BRA0820 YP_005614498.1 corresponds to BRA0821 YP_005614499.1 identified by match to PFAM protein family HMM PF04012; corresponds to BRA0822 YP_005614500.1 similar to GP:14025434, and GP:14025434; identified by sequence similarity; putative; corresponds to BRA0823 YP_005614501.1 corresponds to BRA0824 YP_005614502.1 identified by match to TIGR protein family HMM TIGR00024; corresponds to BRA0825 YP_005614503.1 similar to GP:14025425; identified by sequence similarity; putative; corresponds to BRA0826 YP_005614504.1 corresponds to BRA0827 YP_005614505.1 similar to GP:15073435; identified by sequence similarity; putative; corresponds to BRA0828 YP_005614506.1 corresponds to BRA0829 YP_005614507.1 corresponds to BRA0830 YP_005614508.1 similar to GP:15155334, and GP:15073434; identified by sequence similarity; putative; corresponds to BRA0831 YP_005614509.1 corresponds to BRA0832 YP_005614510.1 corresponds to BRA0833 YP_005614511.1 corresponds to BRA0834 YP_005614512.1 corresponds to BRA0835 YP_005614513.1 similar to GP:7630140; identified by sequence similarity; putative; corresponds to BRA0836 YP_005614514.1 corresponds to BRA0837 YP_005614515.1 corresponds to BRA0838 YP_005614516.1 identified by match to PFAM protein family HMM PF01420; corresponds to BRA0839 YP_005614517.1 identified by match to PFAM protein family HMM PF01170; corresponds to BRA0840 YP_005614518.1 identified by match to PFAM protein family HMM PF03809; corresponds to BRA0841 YP_005614519.1 identified by match to PFAM protein family HMM PF03726; corresponds to BRA0842 YP_005614520.1 identified by match to PFAM protein family HMM PF01863; corresponds to BRA0843 YP_005614521.1 similar to GP:6900910, GB:J00153, GB:V00491, GB:V00492, GB:J00157, GB:M22814, SP:P01922, PID:1335076, PID:1340147, PID:1340148, PID:1817577, PID:1817578, PID:183801, PID:183805, PID:28547, PID:28558, PID:386764, PID:386765, PID:537333, GB:J00153, GB:V00516, GB:V00493, GB:V00488, GB:V00489, GB:M24793, GB:M22814, SP:P01922, PID:1335076, PID:1340147, PID:1340148, PID:1817577, PID:1817578, PID:183801, PID:183805, PID:28547, PID:28558, PID:386764, PID:386765, and PID:537333; identified by sequence similarity; putative; corresponds to BRA0844 YP_005614522.1 corresponds to BRA0845 YP_005614523.1 similar to GB:X07282, SP:P10826, PID:184477, PID:32026, PID:35883, GB:D38554, PID:1354931, and PID:559705; identified by sequence similarity; putative; corresponds to BRA0846 YP_005614524.1 similar to PIR:PN0685, GB:X07282, SP:P10826, PID:184477, PID:32026, and PID:35883; identified by sequence similarity; putative; corresponds to BRA0847 YP_005614525.1 corresponds to BRA0848 YP_005614526.1 corresponds to BRA0849 YP_005614527.1 identified by match to PFAM protein family HMM PF03788; corresponds to BRA0850 YP_005614528.1 identified by match to PFAM protein family HMM PF03819; corresponds to BRA0851 YP_005614529.1 identified by match to TIGR protein family HMM TIGR01472; corresponds to BRA0852 YP_005614530.1 identified by match to PFAM protein family HMM PF00893; corresponds to BRA0853 YP_005614531.1 identified by match to TIGR protein family HMM TIGR01668; corresponds to BRA0855 YP_005614532.1 corresponds to BRA0856 YP_005614533.1 identified by match to PFAM protein family HMM PF00455; corresponds to BRA0857 YP_005614534.1 corresponds to BRA0858 YP_005614535.1 similar to GP:15140211; identified by sequence similarity; putative; corresponds to BRA0859 YP_005614536.1 identified by match to TIGR protein family HMM TIGR00972; corresponds to BRA0860 YP_005614537.1 similar to GP:15140209, and GP:15140209; identified by sequence similarity; putative; corresponds to BRA0861 YP_005614538.1 corresponds to BRA0862 YP_005614539.1 corresponds to BRA0863 YP_005614540.1 similar to GP:4204896, and GP:4204896; identified by sequence similarity; putative; corresponds to BRA0864 YP_005614541.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; corresponds to BRA0865 YP_005614542.1 similar to GP:4204898, and GP:4204898; identified by sequence similarity; putative; corresponds to BRA0866 YP_005614543.1 similar to GP:4204899, and GP:4204899; identified by sequence similarity; putative; corresponds to BRA0867 YP_005614544.1 similar to GP:4204900; identified by sequence similarity; putative; corresponds to BRA0868 YP_005614545.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; corresponds to BRA0869 YP_005614546.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; corresponds to BRA0870 YP_005614547.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; corresponds to BRA0871 YP_005614548.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; corresponds to BRA0872 YP_005614549.1 corresponds to BRA0873 YP_005614550.1 similar to GP:15073394, and GP:15073394; identified by sequence similarity; putative; corresponds to BRA0874 YP_005614551.1 similar to GP:15076115; identified by sequence similarity; putative; corresponds to BRA0875 YP_005614552.1 similar to GP:17134323; identified by sequence similarity; putative; corresponds to BRA0876 YP_005614553.1 corresponds to BRA0877 YP_005614554.1 similar to SP:P24171; identified by sequence similarity; putative; corresponds to BRA0878 YP_005614555.1 identified by match to PFAM protein family HMM PF00903; corresponds to BRA0879 YP_005614556.1 similar to GP:15076201, and GP:15076201; identified by sequence similarity; putative; corresponds to BRA0880 YP_005614557.1 corresponds to BRA0882 YP_005614558.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; corresponds to BRA0883 YP_005614559.1 similar to GP:15076200; identified by sequence similarity; putative; corresponds to BRA0884 YP_005614560.1 similar to GP:15073893, and SP:O68390; identified by sequence similarity; putative; corresponds to BRA0885 YP_005614561.1 similar to GP:14456720; identified by sequence similarity; putative; corresponds to BRA0886 YP_005614562.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; corresponds to BRA0887 YP_005614563.1 similar to GP:15157678; identified by sequence similarity; putative; corresponds to BRA0888 YP_005614564.1 similar to GP:15073366; identified by sequence similarity; putative; corresponds to BRA0889 YP_005614565.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; corresponds to BRA0890 YP_005614566.1 identified by match to PFAM protein family HMM PF03966; corresponds to BRA0891 YP_005614567.1 similar to GP:14024485; identified by sequence similarity; putative; corresponds to BRA0892 YP_005614568.1 identified by match to PFAM protein family HMM PF03745; corresponds to BRA0893 YP_005614569.1 corresponds to BRA0894 YP_005614570.1 corresponds to BRA0895 YP_005614572.1 similar to GP:15155141; identified by sequence similarity; putative; corresponds to BRA0898 YP_005614573.1 catalyzes the formation of L-proline from L-ornithine; corresponds to BRA0899 YP_005614574.1 similar to SP:P10366, GB:U02070, GB:X63697, PID:41022, PID:41708, PID:509817, GB:U00096, PID:1736697, and PID:1788330; identified by sequence similarity; putative; corresponds to BRA0900 YP_005614575.1 identified by match to PFAM protein family HMM PF02954; corresponds to BRA0901 YP_005614576.1 similar to GP:15074497; identified by sequence similarity; putative; corresponds to BRA0902 YP_005614577.1 similar to GP:15074498; identified by sequence similarity; putative; corresponds to BRA0903 YP_005614578.1 similar to SP:P26606, GB:D11109, PID:216433, PID:466645, GB:U00096, and PID:1789924; identified by sequence similarity; putative; corresponds to BRA0904 YP_005614579.1 similar to GP:15157750; identified by sequence similarity; putative; corresponds to BRA0905 YP_005614580.1 similar to GP:15076313; identified by sequence similarity; putative; corresponds to BRA0906 YP_005614581.1 similar to GP:15076314, and GP:15076314; identified by sequence similarity; putative; corresponds to BRA0907 YP_005614582.1 similar to GP:15076316; identified by sequence similarity; putative; corresponds to BRA0908 YP_005614583.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; corresponds to BRA0909 YP_005614584.1 identified by match to PFAM protein family HMM PF01380; corresponds to BRA0910 YP_005614585.1 similar to GB:X56652, GB:L05921, GB:M10906, GB:M23698, GB:X51443, SP:P02735, PID:36308, PID:36317, PID:758679, PID:758681, PID:758683, PID:825714, PID:825715, PID:825716, PID:825717, and PID:939926; identified by sequence similarity; putative; corresponds to BRA0911 YP_005614586.1 similar to SP:Q9V249; identified by sequence similarity; putative; corresponds to BRA0912 YP_005614587.1 similar to GP:15073129; identified by sequence similarity; putative; corresponds to BRA0913 YP_005614588.1 similar to GP:17984539; identified by sequence similarity; putative; corresponds to BRA0914 YP_005614589.1 identified by match to TIGR protein family HMM TIGR00998; corresponds to BRA0915 YP_005614590.1 identified by match to TIGR protein family HMM TIGR00998; corresponds to BRA0916 YP_005614591.1 corresponds to BRA0917 YP_005614592.1 similar to GP:15156636, and GP:15156636; identified by sequence similarity; putative; corresponds to BRA0918 YP_005614593.1 similar to GP:15156635; identified by sequence similarity; putative; corresponds to BRA0919 YP_005614594.1 similar to GP:15141030; identified by sequence similarity; putative; corresponds to BRA0920 YP_005614595.1 similar to GP:15075757, and GP:17742129; identified by sequence similarity; putative; corresponds to BRA0921 YP_005614596.1 similar to GP:5805087, and GP:5805087; identified by sequence similarity; putative; corresponds to BRA0922 YP_005614597.1 identified by match to PFAM protein family HMM PF00842; corresponds to BRA0923 YP_005614598.1 catalyzes the oxidative deamination of D-amino acids; corresponds to BRA0924 YP_005614599.1 similar to GP:15076318; identified by sequence similarity; putative; corresponds to BRA0925 YP_005614600.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; corresponds to BRA0926 YP_005614601.1 similar to SP:P22773; identified by sequence similarity; putative; corresponds to BRA0927 YP_005614602.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glu; corresponds to BRA0928 YP_005614603.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; corresponds to BRA0929 YP_005614604.1 catalyzes the degradation of histidine to urocanate and ammmonia; corresponds to BRA0930 YP_005614605.1 similar to GP:15159359; identified by sequence similarity; putative; corresponds to BRA0931 YP_005614606.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; corresponds to BRA0932 YP_005614607.1 similar to GP:15075729, and GP:15075729; identified by sequence similarity; putative; corresponds to BRA0933 YP_005614608.1 catalyzes the transamination of D-amino acids and their alpha-keto acids; corresponds to BRA0934 YP_005614609.1 similar to GB:M33819; identified by sequence similarity; putative; corresponds to BRA0935 YP_005614610.1 similar to GP:15485215; identified by sequence similarity; putative; corresponds to BRA0936 YP_005614611.1 similar to GB:D14697, GB:J05262, GB:M29863, SP:P14324, PID:182399, PID:182405, PID:285965, and PID:285965; identified by sequence similarity; putative; corresponds to BRA0937 YP_005614612.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; corresponds to BRA0938 YP_005614613.1 similar to GP:15155670, GB:M38180, GB:X55997, GB:M27137, SP:P14060, SP:P26439, PID:177191, PID:177196, PID:179468, PID:23862, PID:287844, and PID:306889; identified by sequence similarity; putative; corresponds to BRA0939 YP_005614614.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; corresponds to BRA0940 YP_005614615.1 similar to GP:15156146, GB:L09118, GB:L23205, SP:Q05940, PID:1220370, PID:1770738, PID:292335, PID:296189, and PID:349712; identified by sequence similarity; putative; corresponds to BRA0941 YP_005614616.1 corresponds to BRA0942 YP_005614617.1 corresponds to BRA0943 YP_005614618.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; corresponds to BRA0945 YP_005614619.1 corresponds to BRA0946 YP_005614620.1 intracellular enzymes acting on low molecular weight D-amino acid amides, esters and oligopeptides containing D-amino acids; these proteases release the N-terminal D-amino acid from a peptide, and show higher affinity for D-Ala, D-Ser or D-Thr; no preference for the stereochemistry of the second amino acid; corresponds to BRA0947 YP_005614621.1 similar to GP:15075720, and SP:P45766; identified by sequence similarity; putative; corresponds to BRA0948 YP_005614622.1 similar to GP:15075719; identified by sequence similarity; putative; corresponds to BRA0949 YP_005614623.1 corresponds to BRA0950 YP_005614624.1 similar to GP:15075718; identified by sequence similarity; putative; corresponds to BRA0951 YP_005614625.1 similar to GP:15075996; identified by sequence similarity; putative; corresponds to BRA0952 YP_005614626.1 similar to GP:15159145, and GP:15075607; identified by sequence similarity; putative; corresponds to BRA0953 YP_005614627.1 similar to GP:15159144; identified by sequence similarity; putative; corresponds to BRA0954 YP_005614628.1 similar to GP:15075999, and SP:P22731; identified by sequence similarity; putative; corresponds to BRA0955 YP_005614629.1 similar to GP:15076000; identified by sequence similarity; putative; corresponds to BRA0956 YP_005614630.1 similar to GP:15159141; identified by sequence similarity; putative; corresponds to BRA0957 YP_005614631.1 similar to GP:15076002; identified by sequence similarity; putative; corresponds to BRA0958 YP_005614632.1 corresponds to BRA0959 YP_005614633.1 identified by match to PFAM protein family HMM PF03734; corresponds to BRA0960 YP_005614634.1 identified by match to TIGR protein family HMM TIGR00972; corresponds to BRA0961 YP_005614635.1 identified by match to TIGR protein family HMM TIGR01594; corresponds to BRA0962 YP_005614636.1 identified by match to PFAM protein family HMM PF00903; corresponds to BRA0963 YP_005614637.1 similar to GP:15075882; identified by sequence similarity; putative; corresponds to BRA0964 YP_005614638.1 corresponds to BRA0965 YP_005614639.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; corresponds to BRA0966 YP_005614640.1 similar to GP:15156967, and GP:15156967; identified by sequence similarity; putative; corresponds to BRA0967 YP_005614641.1 similar to GB:X60708, GB:U13710, GB:U13711, GB:U13712, GB:U13713, GB:U13714, GB:U13715, GB:U13716, GB:U13717, GB:U13718, GB:U13719, GB:U13720, GB:U13721, GB:U13722, GB:U13723, GB:U13724, GB:U13725, GB:U13726, GB:U13727, GB:U13728, GB:U13729, GB:U13730, GB:U13731, GB:U13732, GB:U13733, GB:U13734, GB:U13735, GB:S79876, SP:P27487, PID:180083, PID:181570, PID:35336, and PID:535388; identified by sequence similarity; putative; corresponds to BRA0968 YP_005614642.1 identified by match to TIGR protein family HMM TIGR01662; corresponds to BRA0969 YP_005614643.1 identified by match to PFAM protein family HMM PF03447; corresponds to BRA0970 YP_005614644.1 similar to GP:15075885, GB:M64979, GB:L14754, GB:L24544, SP:P38935, PID:401776, and PID:908917; identified by sequence similarity; putative; corresponds to BRA0971 YP_005614645.1 similar to GP:15075886, GB:V00497, GB:M25113, GB:U01317, GB:M36640, GB:M25660, GB:A01592, GB:A18171, GB:M11428, GB:M25079, GB:V00500, GB:L48213, GB:U20223, GB:V00499, GB:V00498, SP:P02023, SP:P02042, PID:1066755, PID:1066758, PID:1066761, PID:1066764, PID:1066767, PID:1066770, PID:1066773, PID:1066776, PID:1066779, and PID:455998; identified by sequence similarity; putative; corresponds to BRA0972 YP_005614646.1 similar to GB:X70218, SP:P33172, and PID:312814; identified by sequence similarity; putative; corresponds to BRA0973 YP_005614647.1 similar to GP:15075888, and GP:15075888; identified by sequence similarity; putative; corresponds to BRA0974 YP_005614648.1 corresponds to BRA0975 YP_005614649.1 corresponds to BRA0976 YP_005614650.1 corresponds to BRA0977 YP_005614651.1 identified by match to TIGR protein family HMM TIGR00254; corresponds to BRA0979 YP_005614652.1 corresponds to BRA0980 YP_005614653.1 similar to GP:12698385, GB:M62800, GB:U01882, SP:P19474, PID:337485, PID:338490, PID:665918, and PID:747927; identified by sequence similarity; putative; corresponds to BRA0981 YP_005614654.1 identified by match to PFAM protein family HMM PF00117; corresponds to BRA0982 YP_005614655.1 Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; corresponds to BRA0983 YP_005614656.1 identified by match to TIGR protein family HMM TIGR01481; corresponds to BRA0984 YP_005614657.1 similar to GP:15075894, GB:X74863, SP:P52954, PID:1617116, and PID:510998; identified by sequence similarity; putative; corresponds to BRA0986 YP_005614658.1 similar to GP:15075895; identified by sequence similarity; putative; corresponds to BRA0987 YP_005614659.1 identified by match to PFAM protein family HMM PF00400; corresponds to BRA0988 YP_005614660.1 similar to GP:15075513, and GP:15075513; identified by sequence similarity; putative; corresponds to BRA0989 YP_005614661.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; corresponds to BRA0990 YP_005614662.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; corresponds to BRA0991 YP_005614663.1 identified by match to TIGR protein family HMM TIGR00004; corresponds to BRA0992 YP_005614664.1 similar to GP:15139890; identified by sequence similarity; putative; corresponds to BRA0993 YP_005614665.1 similar to SP:P04984; identified by sequence similarity; putative; corresponds to BRA0994 YP_005614666.1 identified by match to TIGR protein family HMM TIGR00955; corresponds to BRA0995 YP_005614667.1 similar to GP:15139893; identified by sequence similarity; putative; corresponds to BRA0996 YP_005614668.1 similar to GP:11275975; identified by sequence similarity; putative; corresponds to BRA0997 YP_005614669.1 similar to GP:5420003, and GP:5420003; identified by sequence similarity; putative; corresponds to BRA0998 YP_005614670.1 similar to GB:M90413, PID:153311, GB:Z22551, GB:D13629, GB:L25616, PID:285985, and PID:409466; identified by sequence similarity; putative; corresponds to BRA0999 YP_005614671.1 similar to GP:15156545, and GP:15156545; identified by sequence similarity; putative; corresponds to BRA1000 YP_005614672.1 similar to SP:P47233; identified by sequence similarity; putative; corresponds to BRA1001 YP_005614673.1 similar to SP:P81065, GB:J00117, GB:K03180, GB:K03187, GB:K03188, GB:K03189, GB:X00265, GB:X00266, GB:K03183, GB:K00092, GB:K03182, SP:P01229, SP:P01233, PID:1335012, PID:1335075, PID:180437, PID:180444, and PID:180453; identified by sequence similarity; putative; corresponds to BRA1002 YP_005614674.1 corresponds to BRA1003 YP_005614675.1 identified by match to PFAM protein family HMM PF03772; corresponds to BRA1004 YP_005614676.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; corresponds to BRA1005 YP_005614677.1 3'-5' exonuclease of DNA polymerase III; corresponds to BRA1006 YP_005614678.1 similar to GP:15160122; identified by sequence similarity; putative; corresponds to BRA1008 YP_005614679.1 identified by match to TIGR protein family HMM TIGR01188; corresponds to BRA1009 YP_005614680.1 identified by match to PFAM protein family HMM PF03772; corresponds to BRA1010 YP_005614681.1 identified by match to PFAM protein family HMM PF00528; corresponds to BRA1011 YP_005614682.1 identified by match to TIGR protein family HMM TIGR01698; corresponds to BRA1012 YP_005614683.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; corresponds to BRA1013 YP_005614684.1 identified by match to TIGR protein family HMM TIGR01682; corresponds to BRA1014 YP_005614685.1 identified by match to PFAM protein family HMM PF01325; corresponds to BRA1015 YP_005614686.1 corresponds to BRA1016 YP_005614687.1 similar to SP:P76269; identified by sequence similarity; putative; corresponds to BRA1017 YP_005614688.1 corresponds to BRA1018 YP_005614689.1 identified by match to TIGR protein family HMM TIGR00004; corresponds to BRA1019 YP_005614690.1 corresponds to BRA1020 YP_005614691.1 in Escherichia coli transcription of this gene is enhanced by polyamines; corresponds to BRA1021 YP_005614692.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; corresponds to BRA1022 YP_005614693.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; corresponds to BRA1023 YP_005614694.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; corresponds to BRA1024 YP_005614695.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; corresponds to BRA1025 YP_005614696.1 identified by match to TIGR protein family HMM TIGR01668; corresponds to BRA1026 YP_005614697.1 similar to GP:15073363, and GP:15073363; identified by sequence similarity; putative; corresponds to BRA1027 YP_005614698.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; corresponds to BRA1028 YP_005614699.1 corresponds to BRA1029 YP_005614700.1 corresponds to BRA1030 YP_005614701.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; corresponds to BRA1031 YP_005614702.1 similar to GP:15073353; identified by sequence similarity; putative; corresponds to BRA1032 YP_005614703.1 corresponds to BRA1033 YP_005614704.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; corresponds to BRA1034 YP_005614705.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); corresponds to BRA1035 YP_005614706.1 similar to GP:14024818; identified by sequence similarity; putative; corresponds to BRA1036 YP_005614707.1 similar to GP:15073194, and GP:15073194; identified by sequence similarity; putative; corresponds to BRA1037 YP_005614708.1 corresponds to BRA1038 YP_005614709.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; corresponds to BRA1039 YP_005614710.1 corresponds to BRA1040 YP_005614711.1 identified by match to TIGR protein family HMM TIGR01181; corresponds to BRA1041 YP_005614712.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; corresponds to BRA1042 YP_005614713.1 corresponds to BRA1043 YP_005614714.1 identified by match to PFAM protein family HMM PF03578; corresponds to BRA1044 YP_005614715.1 identified by match to PFAM protein family HMM PF00037; corresponds to BRA1045 YP_005614716.1 similar to GP:15073254; identified by sequence similarity; putative; corresponds to BRA1046 YP_005614717.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; corresponds to BRA1047 YP_005614718.1 catalyzes the formation of methylglyoxal from glycerone phosphate; corresponds to BRA1048 YP_005614719.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; corresponds to BRA1049 YP_005614720.1 similar to GB:U09086, GB:U09087, GB:U09088, GB:S76736, SP:P42166, SP:P42167, PID:508725, PID:508727, PID:508729, PID:885683, and PID:885684; identified by sequence similarity; putative; corresponds to BRA1050 YP_005614721.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; corresponds to BRA1051 YP_005614722.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; corresponds to BRA1052 YP_005614723.1 identified by match to PFAM protein family HMM PF03663; corresponds to BRA1053 YP_005614724.1 similar to GP:3128327, GB:U05040, and PID:460152; identified by sequence similarity; putative; corresponds to BRA1054 YP_005614725.1 similar to GP:15155425; identified by sequence similarity; putative; corresponds to BRA1055 YP_005614726.1 corresponds to BRA1056 YP_005614727.1 corresponds to BRA1057 YP_005614728.1 similar to GP:3336914; identified by sequence similarity; putative; corresponds to BRA1058 YP_005614729.1 similar to GP:15074185, and GP:15074185; identified by sequence similarity; putative; corresponds to BRA1059 YP_005614730.1 similar to GP:15157671, and SP:O66043; identified by sequence similarity; putative; corresponds to BRA1060 YP_005614731.1 corresponds to BRA1061 YP_005614732.1 corresponds to BRA1062 YP_005614733.1 identified by match to TIGR protein family HMM TIGR01393; corresponds to BRA1063 YP_005614734.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; corresponds to BRA1064 YP_005614735.1 identified by match to PFAM protein family HMM PF00069; corresponds to BRA1065 YP_005614736.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; corresponds to BRA1066 YP_005614737.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; corresponds to BRA1067 YP_005614738.1 identified by match to PFAM protein family HMM PF03670; corresponds to BRA1068 YP_005614739.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; corresponds to BRA1069 YP_005614740.1 corresponds to BRA1070 YP_005614741.1 corresponds to BRA1071 YP_005614742.1 similar to GP:581026, GB:U12707, GB:U19927, GB:U18935, and PID:622987; identified by sequence similarity; putative; corresponds to BRA1072 YP_005614743.1 identified by match to TIGR protein family HMM TIGR01199; corresponds to BRA1073 YP_005614744.1 identified by match to PFAM protein family HMM PF00392; corresponds to BRA1074 YP_005614745.1 corresponds to BRA1075 YP_005614746.1 similar to GP:15159844; identified by sequence similarity; putative; corresponds to BRA1076 YP_005614747.1 similar to GP:14587414; identified by sequence similarity; putative; corresponds to BRA1077 YP_005614748.1 similar to GP:3402247; identified by sequence similarity; putative; corresponds to BRA1078 YP_005614749.1 similar to GB:M23592, GB:M23593, GB:M23594, GB:M23595, GB:M20841, GB:M74587, GB:M59316, GB:M31145, GB:X12385, GB:X15002, GB:X13405, GB:Y00856, SP:P08833, PID:183118, PID:184810, PID:184812, PID:184826, PID:32609, PID:33014, PID:35572, and PID:35575; identified by sequence similarity; putative; corresponds to BRA1079 YP_005614750.1 similar to SP:P94312; identified by sequence similarity; putative; corresponds to BRA1080 YP_005614751.1 similar to SP:P94311; identified by sequence similarity; putative; corresponds to BRA1081 YP_005614752.1 identified by match to PFAM protein family HMM PF01614; corresponds to BRA1082 YP_005614753.1 similar to GB:L17071, SP:Q07608, GB:U23753, PID:310304, and PID:763542; identified by sequence similarity; putative; corresponds to BRA1084 YP_005614754.1 converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; corresponds to BRA1086 YP_005614755.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; corresponds to BRA1087 YP_005614756.1 similar to SP:P45857; identified by sequence similarity; putative; corresponds to BRA1088 YP_005614757.1 similar to SP:P15558; identified by sequence similarity; putative; corresponds to BRA1089 YP_005614758.1 similar to GP:15160115, and SP:P55669; identified by sequence similarity; putative; corresponds to BRA1090 YP_005614759.1 corresponds to BRA1091 YP_005614760.1 similar to GP:10172641, and GP:18092570; identified by sequence similarity; putative; corresponds to BRA1092 YP_005614761.1 similar to GP:15160117, and SP:P94312; identified by sequence similarity; putative; corresponds to BRA1093 YP_005614762.1 similar to GP:15158781; identified by sequence similarity; putative; corresponds to BRA1094 YP_005614763.1 similar to GP:14523620; identified by sequence similarity; putative; corresponds to BRA1096 YP_005614764.1 similar to GP:18092565; identified by sequence similarity; putative; corresponds to BRA1097 YP_005614765.1 similar to SP:P94311; identified by sequence similarity; putative; corresponds to BRA1098 YP_005614766.1 similar to SP:P94312; identified by sequence similarity; putative; corresponds to BRA1099 YP_005614767.1 similar to SP:Q53194, GB:M62834, SP:P24093, GB:X69102, PID:145801, PID:433881, PID:639970, and SP:Q57254; identified by sequence similarity; putative; corresponds to BRA1101 YP_005614768.1 similar to GB:M20867, GB:M18377, GB:J03248, GB:M17697, GB:M37154, GB:X07769, GB:X53146, GB:X66300, SP:P00367, SP:P49448, PID:1335082, PID:183054, PID:183056, PID:183058, PID:183060, PID:183062, PID:31707, PID:31799, PID:478988, and PID:579924; identified by sequence similarity; putative; corresponds to BRA1102 YP_005614769.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; corresponds to BRA1103 YP_005614770.1 identified by match to TIGR protein family HMM TIGR00969; corresponds to BRA1105 YP_005614771.1 similar to SP:P23860, GB:L26967, SP:P12780, PID:152249, and PID:435107; identified by sequence similarity; putative; corresponds to BRA1106 YP_005614772.1 identified by match to PFAM protein family HMM PF03781; corresponds to BRA1108 YP_005614773.1 corresponds to BRA1109 YP_005614774.1 similar to GP:15075256, GB:X12466, GB:M37716, GB:M15919, SP:P08578, PID:338267, PID:338269, and PID:35105; identified by sequence similarity; putative; corresponds to BRA1110 YP_005614775.1 similar to GB:J00222, GB:S55273, SP:P01854, PID:184760, PID:2300106, PID:386807, GB:J00222, GB:S55273, SP:P01854, PID:184760, PID:2300106, and PID:386807; identified by sequence similarity; putative; corresponds to BRA1111 YP_005614776.1 corresponds to BRA1112 YP_005614777.1 identified by match to PFAM protein family HMM PF02452; corresponds to BRA1113 YP_005614778.1 identified by match to TIGR protein family HMM TIGR01199; corresponds to BRA1115 YP_005614779.1 similar to GP:581026, GB:U12707, GB:U19927, GB:U18935, and PID:622987; identified by sequence similarity; putative; corresponds to BRA1116 YP_005614780.1 similar to GP:14024748, and GP:14024748; identified by sequence similarity; putative; corresponds to BRA1118 YP_005614781.1 identified by match to PFAM protein family HMM PF02082; corresponds to BRA1119 YP_005614782.1 similar to GP:15160214; identified by sequence similarity; putative; corresponds to BRA1120 YP_005614783.1 corresponds to BRA1121 YP_005614784.1 similar to GP:15074849, and SP:P39172; identified by sequence similarity; putative; corresponds to BRA1122 YP_005614785.1 similar to GP:15156606; identified by sequence similarity; putative; corresponds to BRA1123 YP_005614786.1 similar to GP:15074847, and GP:17739944; identified by sequence similarity; putative; corresponds to BRA1124 YP_005614787.1 similar to GP:15156604; identified by sequence similarity; putative; corresponds to BRA1125 YP_005614788.1 corresponds to BRA1126 YP_005614789.1 corresponds to BRA1127 YP_005614790.1 similar to GP:15073620; identified by sequence similarity; putative; corresponds to BRA1128 YP_005614791.1 similar to GP:15073619, and GP:15073619; identified by sequence similarity; putative; corresponds to BRA1129 YP_005614792.1 similar to GP:3876134; identified by sequence similarity; putative; corresponds to BRA1130 YP_005614793.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; corresponds to BRA1131 YP_005614794.1 membrane protein involved in the flagellar export apparatus; corresponds to BRA1132 YP_005614795.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; corresponds to BRA1133 YP_005614796.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; corresponds to BRA1134 YP_005614797.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; corresponds to BRA1135 YP_005614798.1 acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; corresponds to BRA1136 YP_005614799.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; corresponds to BRA1137 YP_005614800.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; corresponds to BRA1138 YP_005614801.1 the hook connects flagellar basal body to the flagellar filament; corresponds to BRA1139 YP_005614802.1 similar to GP:15073608; identified by sequence similarity; putative; corresponds to BRA1140 YP_005614803.1 similar to GP:15073607, and GP:15073607; identified by sequence similarity; putative; corresponds to BRA1141 YP_005614804.1 similar to GP:15155510, and SP:Q52964; identified by sequence similarity; putative; corresponds to BRA1142 YP_005614805.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; corresponds to BRA1144 YP_005614806.1 similar to GP:15155507, and GP:12057223; identified by sequence similarity; putative; corresponds to BRA1145 YP_005614807.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; corresponds to BRA1146 YP_005614808.1 similar to GP:2832232; identified by sequence similarity; putative; corresponds to BRA1147 YP_005614809.1 similar to GP:15162141, and GP:15162141; identified by sequence similarity; putative; corresponds to BRA1148 YP_005614810.1 corresponds to BRA1149 YP_005614811.1 similar to GB:X03656, GB:X03438, GB:M17706, SP:P09919, PID:1330309, PID:1330310, PID:183041, PID:183045, PID:296647, PID:31690, and PID:732764; identified by sequence similarity; putative; corresponds to BRA1150 YP_005614812.1 with XylFH is part of the high affinity xylose ABC transporter; corresponds to BRA1151 YP_005614813.1 similar to GB:L17326, and PID:306325; identified by sequence similarity; putative; corresponds to BRA1152 YP_005614814.1 corresponds to BRA1153 YP_005614815.1 similar to SP:P36673, GB:U07790, PID:465107, PID:537083, GB:U00096, PID:1790689, and PID:1843456; identified by sequence similarity; putative; corresponds to BRA1154 YP_005614816.1 similar to GP:4566586; identified by sequence similarity; putative; corresponds to BRA1155 YP_005614817.1 similar to GB:M79446, SP:P24182, GB:M83198, PID:145175, PID:145893, PID:145896, PID:606196, GB:U00096, PID:1789654, GB:U03272, SP:P35556, and PID:437972; identified by sequence similarity; putative; corresponds to BRA1156 YP_005614818.1 corresponds to BRA1157 YP_005614819.1 similar to GB:M98276, SP:Q04626, GB:M64046, PID:151020, PID:45360, SP:P77915, PID:1515308, GB:M13300, GB:M13301, GB:M13302, GB:M13303, GB:M13304, GB:M13305, GB:X54705, GB:X54675, GB:Z68193, SP:P04000, SP:P04001, PID:1122284, and PID:180703; identified by sequence similarity; putative; corresponds to BRA1158 YP_005614820.1 similar to GP:14424793; identified by sequence similarity; putative; corresponds to BRA1159 YP_005614821.1 similar to GB:X75771, and PID:455422; identified by sequence similarity; putative; corresponds to BRA1161 YP_005614822.1 similar to GP:10048282, and SP:Q05354; identified by sequence similarity; putative; corresponds to BRA1162 YP_005614823.1 identified by match to PFAM protein family HMM PF03551; corresponds to BRA1163 YP_005614824.1 similar to GP:15162021, and GP:14026357; identified by sequence similarity; putative; corresponds to BRA1164 YP_005614825.1 similar to GP:14524116; identified by sequence similarity; putative; corresponds to BRA1165 YP_005614826.1 identified by match to TIGR protein family HMM TIGR00699; corresponds to BRA1166 YP_005614827.1 similar to GB:M60787, and PID:150163; identified by sequence similarity; putative; corresponds to BRA1167 YP_005614828.1 similar to GP:14271863; identified by sequence similarity; putative; corresponds to BRA1168 YP_005614829.1 similar to GB:D12765, SP:P43268, PID:219611, and PID:602288; identified by sequence similarity; putative; corresponds to BRA1169 YP_005614830.1 similar to GP:5441757; identified by sequence similarity; putative; corresponds to BRA1170 YP_005614831.1 similar to GB:M11147, GB:M10119, GB:M12938, GB:X03742, GB:X03743, SP:P02792, PID:1340145, PID:1340146, PID:182514, PID:182516, PID:182518, PID:2230869, and PID:28519; identified by sequence similarity; putative; corresponds to BRA1171 YP_005614832.1 corresponds to BRA1172 YP_005614833.1 corresponds to BRA1173 YP_005614834.1 similar to GP:9716222; identified by sequence similarity; putative; corresponds to BRA1174 YP_005614835.1 similar to GP:15156481; identified by sequence similarity; putative; corresponds to BRA1175 YP_005614836.1 similar to GB:M16442, and PID:143790; identified by sequence similarity; putative; corresponds to BRA1176 YP_005614837.1 identified by match to PFAM protein family HMM PF03988; corresponds to BRA1177 YP_005614838.1 identified by match to PFAM protein family HMM PF03741; corresponds to BRA1178 YP_005614839.1 identified by match to PFAM protein family HMM PF00392; corresponds to BRA1179 YP_005614840.1 corresponds to BRA1180 YP_005614841.1 identified by match to TIGR protein family HMM TIGR00023; corresponds to BRA1181 YP_005614842.1 identified by match to TIGR protein family HMM TIGR00969; corresponds to BRA1182 YP_005614843.1 similar to SP:Q01937; identified by sequence similarity; putative; corresponds to BRA1183 YP_005614844.1 identified by match to PFAM protein family HMM PF00149; corresponds to BRA1184 YP_005614845.1 identified by match to PFAM protein family HMM PF00884; corresponds to BRA1185 YP_005614846.1 similar to GP:7799282, and SP:Q47537; identified by sequence similarity; putative; corresponds to BRA1186 YP_005614847.1 similar to GP:7799281; identified by sequence similarity; putative; corresponds to BRA1187 YP_005614848.1 similar to GP:7799280, and SP:Q47539; identified by sequence similarity; putative; corresponds to BRA1188 YP_005614849.1 similar to GP:2661680; identified by sequence similarity; putative; corresponds to BRA1189 YP_005614850.1 similar to GB:X73376, GB:X73377, GB:X73378, GB:X73379, GB:X73380, GB:X73381, GB:X73382, GB:X73384, GB:X73385, PID:475179, and PID:475185; identified by sequence similarity; putative; corresponds to BRA1190 YP_005614851.1 corresponds to BRA1191 YP_005614852.1 identified by match to PFAM protein family HMM PF00191; corresponds to BRA1192 YP_005614853.1 similar to GP:151110, and SP:P04816; identified by sequence similarity; putative; corresponds to BRA1193 YP_005614854.1 similar to GB:L19201, SP:P32174, PID:304996, GB:U00096, and PID:1790325; identified by sequence similarity; putative; corresponds to BRA1194 YP_005614855.1 similar to GB:M59757, SP:P25993, PID:143389, and GB:AL009126; identified by sequence similarity; putative; corresponds to BRA1196 YP_005614856.1 similar to SP:P22731, GB:M16442, and PID:143790; identified by sequence similarity; putative; corresponds to BRA1197 YP_005614857.1 similar to GP:3128316, and GP:17984226; identified by sequence similarity; putative; corresponds to BRA1198 YP_005614858.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; corresponds to BRA1199 YP_005614859.1 corresponds to BRA1200 YP_005614860.1 corresponds to BRA1201 YP_005614861.1 identified by match to TIGR protein family HMM TIGR01281; corresponds to BRA1202 YP_005614862.1 similar to SP:P55392; identified by sequence similarity; putative; corresponds to BRA1203 YP_005614863.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; corresponds to BR0001 YP_005614864.1 binds the polymerase to DNA and acts as a sliding clamp; corresponds to BR0002 YP_005614865.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; corresponds to BR0003 YP_005614866.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; corresponds to BR0004 YP_005614867.1 identified by similarity to EGAD:90750; match to protein family HMM PF02826; corresponds to BR0005 YP_005614868.1 identified by similarity to SP:P33916; match to protein family HMM PF00005; corresponds to BR0006 YP_005614869.1 identified by similarity to GP:17983985; match to protein family HMM PF00528; corresponds to BR0007 YP_005614870.1 identified by similarity to SP:P33914; match to protein family HMM PF00528; corresponds to BR0008 YP_005614871.1 identified by similarity to SP:P33913; match to protein family HMM PF00496; corresponds to BR0009 YP_005614872.1 identified by match to protein family HMM PF00496; corresponds to BR0010 YP_005614873.1 corresponds to BR0011 YP_005614874.1 corresponds to BR0012 YP_005614875.1 corresponds to BR0013 YP_005614876.1 identified by similarity to SP:P02917; match to protein family HMM PF01094; corresponds to BR0014 YP_005614877.1 identified by similarity to OMNI:NTL02ML1891; corresponds to BR0015 YP_005614878.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; corresponds to BR0016 YP_005614879.1 identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786; corresponds to BR0018 YP_005614880.1 identified by match to protein family HMM PF01039; corresponds to BR0019 YP_005614881.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; corresponds to BR0020 YP_005614882.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; corresponds to BR0021 YP_005614883.1 identified by similarity to OMNI:NTL02ML1269; corresponds to BR0022 YP_005614884.1 identified by similarity to OMNI:CC1521; match to protein family HMM PF01757; corresponds to BR0023 YP_005614885.1 identified by similarity to GP:15073181; corresponds to BR0024 YP_005614886.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; corresponds to BR0025 YP_005614887.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; corresponds to BR0026 YP_005614888.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; corresponds to BR0027 YP_005614889.1 identified by similarity to GP:15155628; match to protein family HMM PF03601; corresponds to BR0028 YP_005614890.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; corresponds to BR0029 YP_005614891.1 corresponds to BR0030 YP_005614892.1 corresponds to BR0031 YP_005614893.1 involved in a recombinational process of DNA repair, independent of the recBC complex; corresponds to BR0032 YP_005614894.1 identified by similarity to OMNI:NTL02ML4268; match to protein family HMM PF02575; match to protein family HMM TIGR00103; corresponds to BR0033 YP_005614895.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; corresponds to BR0034 YP_005614896.1 identified by similarity to OMNI:NTL02ML4266; match to protein family HMM PF01230; corresponds to BR0035 YP_005614897.1 identified by similarity to OMNI:NTL02ML4265; match to protein family HMM PF00293; corresponds to BR0036 YP_005614898.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; corresponds to BR0037 YP_005614899.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; corresponds to BR0038 YP_005614900.1 identified by similarity to EGAD:14195; match to protein family HMM PF00034; corresponds to BR0039 YP_005614901.1 identified by similarity to GP:14021137; match to protein family HMM PF00994; corresponds to BR0040 YP_005614902.1 corresponds to BR0041 YP_005614903.1 identified by similarity to EGAD:20044; match to protein family HMM TIGR01433; corresponds to BR0042 YP_005614904.1 identified by similarity to EGAD:14783; match to protein family HMM PF00115; corresponds to BR0043 YP_005614905.1 identified by similarity to EGAD:13682; match to protein family HMM PF00510; corresponds to BR0044 YP_005614906.1 identified by similarity to EGAD:20825; match to protein family HMM PF03626; corresponds to BR0045 YP_005614907.1 corresponds to BR0046 YP_005614908.1 identified by similarity to GP:3511221; corresponds to BR0047 YP_005614909.1 identified by similarity to OMNI:NTL02ML1304; match to protein family HMM PF01103; corresponds to BR0048 YP_005614910.1 identified by similarity to GP:15076022; match to protein family HMM PF04357; match to protein family HMM TIGR01612; corresponds to BR0049 YP_005614911.1 identified by similarity to GP:15160041; match to protein family HMM PF03734; match to protein family HMM TIGR01409; corresponds to BR0050 YP_005614912.1 corresponds to BR0051 YP_005614913.1 corresponds to BR0052 YP_005614914.1 corresponds to BR0053 YP_005614915.1 identified by similarity to GP:15074483; match to protein family HMM PF04314; corresponds to BR0054 YP_005614916.1 corresponds to BR0055 YP_005614917.1 identified by match to protein family HMM PF00903; corresponds to BR0056 YP_005614918.1 identified by match to protein family HMM PF01883; corresponds to BR0057 YP_005614919.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; corresponds to BR0058 YP_005614920.1 corresponds to BR0059 YP_005614921.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; corresponds to BR0060 YP_005614922.1 corresponds to BR0061 YP_005614923.1 identified by similarity to GP:11066210; corresponds to BR0062 YP_005614924.1 identified by match to protein family HMM PF01557; corresponds to BR0063 YP_005614925.1 identified by similarity to GP:15073555; corresponds to BR0064 YP_005614926.1 corresponds to BR0065 YP_005614927.1 identified by similarity to OMNI:NTL02ML3554; corresponds to BR0066 YP_005614928.1 identified by match to protein family HMM PF01464; corresponds to BR0067 YP_005614929.1 identified by similarity to EGAD:38000; match to protein family HMM PF03006; corresponds to BR0068 YP_005614930.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; corresponds to BR0069 YP_005614931.1 identified by similarity to GP:14523587; corresponds to BR0070 YP_005614932.1 identified by similarity to GP:15076199; corresponds to BR0071 YP_005614933.1 identified by similarity to SP:P10858; match to protein family HMM PF03895; match to protein family HMM PF05658; match to protein family HMM PF05662; corresponds to BR0072 YP_005614934.1 identified by similarity to GP:15073388; corresponds to BR0073 YP_005614935.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; corresponds to BR0074 YP_005614936.1 corresponds to BR0076 YP_005614937.1 identified by similarity to OMNI:NTL02ML3355; match to protein family HMM PF04055; match to protein family HMM TIGR00048; corresponds to BR0077 YP_005614938.1 corresponds to BR0078 YP_005614939.1 corresponds to BR0079 YP_005614940.1 identified by similarity to GP:15076241; corresponds to BR0080 YP_005614941.1 identified by similarity to GP:15076242; corresponds to BR0081 YP_005614942.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; corresponds to BR0082 YP_005614943.1 identified by match to protein family HMM PF01451; corresponds to BR0083 YP_005614944.1 identified by similarity to OMNI:NTL02ML3347; corresponds to BR0084 YP_005614945.1 identified by match to protein family HMM PF00657; corresponds to BR0085 YP_005614946.1 identified by match to protein family HMM PF00005; corresponds to BR0086 YP_005614947.1 identified by match to protein family HMM PF02687; corresponds to BR0087 YP_005614948.1 identified by similarity to GP:15076248; match to protein family HMM PF01027; corresponds to BR0088 YP_005614949.1 identified by similarity to EGAD:8993; match to protein family HMM PF00583; corresponds to BR0089 YP_005614950.1 identified by similarity to GP:15076253; corresponds to BR0090 YP_005614951.1 identified by similarity to GP:15076254; corresponds to BR0091 YP_005614952.1 corresponds to BR0092 YP_005614953.1 Catalyzes the conversion of citrate to isocitrate; corresponds to BR0093 YP_005614954.1 ATP-binding protein; required for proper cytochrome c maturation; corresponds to BR0094 YP_005614955.1 identified by match to protein family HMM PF03379; match to protein family HMM TIGR01190; corresponds to BR0095 YP_005614956.1 identified by similarity to SP:P30962; match to protein family HMM PF01578; match to protein family HMM TIGR01191; corresponds to BR0096 YP_005614957.1 identified by similarity to EGAD:15659; match to protein family HMM PF04995; corresponds to BR0097 YP_005614958.1 identified by match to protein family HMM TIGR00385; corresponds to BR0098 YP_005614959.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; corresponds to BR0099 YP_005614960.1 corresponds to BR0100 YP_005614961.1 identified by similarity to GP:15157523; corresponds to BR0101 YP_005614962.1 identified by similarity to OMNI:CC3015; match to protein family HMM PF00072; corresponds to BR0102 YP_005614963.1 corresponds to BR0103 YP_005614964.1 identified by similarity to GP:15155891; corresponds to BR0104 YP_005614965.1 corresponds to BR0105 YP_005614966.1 identified by similarity to EGAD:8060; corresponds to BR0106 YP_005614967.1 identified by similarity to GP:17983880; match to protein family HMM PF01547; match to protein family HMM TIGR00971; corresponds to BR0107 YP_005614968.1 identified by similarity to SP:Q01895; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02139; corresponds to BR0108 YP_005614969.1 identified by similarity to SP:P16702; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140; corresponds to BR0109 YP_005614970.1 identified by similarity to SP:P14788; match to protein family HMM PF00005; match to protein family HMM TIGR00968; corresponds to BR0110 YP_005614971.1 identified by similarity to GP:3551791; match to protein family HMM TIGR01612; corresponds to BR0111 YP_005614972.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; corresponds to BR0112 YP_005614973.1 identified by similarity to EGAD:38480; match to protein family HMM PF02567; match to protein family HMM TIGR00654; corresponds to BR0113 YP_005614974.1 identified by similarity to GP:15075131; corresponds to BR0114 YP_005614975.1 identified by similarity to EGAD:15614; match to protein family HMM PF00294; corresponds to BR0115 YP_005614976.1 identified by match to protein family HMM PF00106; corresponds to BR0116 YP_005614977.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; corresponds to BR0117 YP_005614978.1 corresponds to BR0118 YP_005614979.1 identified by similarity to EGAD:151783; corresponds to BR0119 YP_005614980.1 identified by match to protein family HMM PF01612; corresponds to BR0120 YP_005614981.1 identified by match to protein family HMM PF01546; corresponds to BR0121 YP_005614982.1 corresponds to BR0122 YP_005614983.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; corresponds to BR0123 YP_005614984.1 identified by similarity to SP:P23304; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; corresponds to BR0124 YP_005614985.1 negatively supercoils closed circular double-stranded DNA; corresponds to BR0125 YP_005614986.1 corresponds to BR0126 YP_005614987.1 identified by similarity to OMNI:NTL02ML5595; match to protein family HMM PF00756; corresponds to BR0127 YP_005614988.1 identified by similarity to GP:14021760; corresponds to BR0128 YP_005614989.1 identified by match to protein family HMM PF00583; corresponds to BR0129 YP_005614990.1 identified by similarity to EGAD:97446; match to protein family HMM PF02583; corresponds to BR0131 YP_005614991.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; corresponds to BR0133 YP_005614992.1 identified by similarity to EGAD:46813; corresponds to BR0134 YP_005614993.1 identified by similarity to PIR:PN0685; match to protein family HMM PF01609; corresponds to BR0135 YP_005614994.1 corresponds to BR0136 YP_005614995.1 identified by match to protein family HMM PF00072; match to protein family HMM TIGR01199; corresponds to BR0137 YP_005614996.1 identified by similarity to GP:15154914; corresponds to BR0138 YP_005614997.1 identified by similarity to GP:9392598; match to protein family HMM PF03734; corresponds to BR0139 YP_005614998.1 identified by match to protein family HMM PF01106; corresponds to BR0140 YP_005614999.1 identified by similarity to GP:15155260; match to protein family HMM PF00582; corresponds to BR0141 YP_005615000.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; corresponds to BR0142 YP_005615001.1 identified by similarity to SP:P56882; match to protein family HMM PF03023; match to protein family HMM TIGR01695; corresponds to BR0143 YP_005615002.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; corresponds to BR0144 YP_005615003.1 corresponds to BR0145 YP_005615004.1 This protein performs the mismatch recognition step during the DNA repair process; corresponds to BR0147 YP_005615005.1 identified by similarity to GP:15073322; corresponds to BR0148 YP_005615006.1 identified by similarity to EGAD:21383; match to protein family HMM PF01252; match to protein family HMM TIGR00077; corresponds to BR0149 YP_005615007.1 identified by match to protein family HMM PF00588; corresponds to BR0150 YP_005615008.1 identified by similarity to OMNI:NTL02ML2473; corresponds to BR0151 YP_005615009.1 identified by similarity to GP:15073316; corresponds to BR0152 YP_005615010.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; corresponds to BR0153 YP_005615011.1 identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706; corresponds to BR0154 YP_005615012.1 identified by similarity to GP:15155241; corresponds to BR0155 YP_005615013.1 identified by similarity to GP:15155240; match to protein family HMM PF03968; corresponds to BR0156 YP_005615014.1 identified by similarity to GP:17983823; match to protein family HMM PF00005; corresponds to BR0157 YP_005615015.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; corresponds to BR0158 YP_005615016.1 corresponds to BR0159 YP_005615017.1 identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; corresponds to BR0160 YP_005615018.1 identified by match to protein family HMM PF00359; match to protein family HMM TIGR01419; corresponds to BR0161 YP_005615019.1 identified by similarity to GP:15073342; corresponds to BR0162 YP_005615020.1 identified by similarity to OMNI:CC3592; match to protein family HMM PF00011; corresponds to BR0163 YP_005615021.1 corresponds to BR0164 YP_005615022.1 identified by similarity to GP:15158767; corresponds to BR0165 YP_005615023.1 identified by similarity to EGAD:18451; match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; corresponds to BR0166 YP_005615024.1 putative role in sulfur assimilation; corresponds to BR0167 YP_005615025.1 corresponds to BR0168 YP_005615026.1 identified by match to protein family HMM PF00294; corresponds to BR0169 YP_005615027.1 identified by similarity to GP:15155036; match to protein family HMM PF03458; corresponds to BR0170 YP_005615028.1 identified by match to protein family HMM PF01025; corresponds to BR0171 YP_005615029.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; corresponds to BR0172 YP_005615030.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; corresponds to BR0173 YP_005615031.1 identified by match to protein family HMM PF00903; corresponds to BR0174 YP_005615032.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; corresponds to BR0175 YP_005615033.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; corresponds to BR0176 YP_005615034.1 identified by similarity to OMNI:CC0144; match to protein family HMM PF00590; match to protein family HMM TIGR00096; corresponds to BR0177 YP_005615035.1 identified by similarity to GP:15073266; match to protein family HMM PF02021; corresponds to BR0178 YP_005615036.1 identified by similarity to SP:P11098; match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470; corresponds to BR0179 YP_005615037.1 identified by similarity to GP:15156533; corresponds to BR0180 YP_005615038.1 identified by similarity to OMNI:CC1119; match to protein family HMM PF01077; match to protein family HMM PF03460; corresponds to BR0181 YP_005615039.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; corresponds to BR0182 YP_005615040.1 identified by similarity to GP:15156535; corresponds to BR0183 YP_005615041.1 identified by similarity to GP:14021352; corresponds to BR0184 YP_005615042.1 identified by similarity to OMNI:CC0659; match to protein family HMM PF01035; match to protein family HMM TIGR00589; corresponds to BR0185 YP_005615043.1 identified by similarity to GP:14025509; corresponds to BR0186 YP_005615044.1 identified by similarity to GP:15073804; corresponds to BR0187 YP_005615045.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; corresponds to BR0188 YP_005615046.1 corresponds to BR0189 YP_005615047.1 identified by match to protein family HMM PF00196; match to protein family HMM PF03472; corresponds to BR0190 YP_005615048.1 identified by match to protein family HMM PF00202; corresponds to BR0191 YP_005615049.1 corresponds to BR0192 YP_005615050.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; corresponds to BR0193 YP_005615051.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; corresponds to BR0194 YP_005615052.1 identified by similarity to SP:P22255; match to protein family HMM PF00459; match to protein family HMM TIGR01331; corresponds to BR0195 YP_005615053.1 identified by match to protein family HMM PF00027; corresponds to BR0196 YP_005615054.1 corresponds to BR0198 YP_005615055.1 identified by similarity to SP:P09392; match to protein family HMM PF00455; corresponds to BR0199 YP_005615056.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; corresponds to BR0200 YP_005615057.1 identified by match to protein family HMM PF00171; corresponds to BR0202 YP_005615058.1 identified by similarity to SP:P42327; match to protein family HMM PF00107; corresponds to BR0203 YP_005615059.1 identified by similarity to OMNI:NTL02ML5214; match to protein family HMM PF05610; corresponds to BR0204 YP_005615060.1 corresponds to BR0207 YP_005615061.1 corresponds to BR0208 YP_005615062.1 corresponds to BR0209 YP_005615063.1 identified by similarity to EGAD:17385; match to protein family HMM PF00171; corresponds to BR0210 YP_005615064.1 identified by match to protein family HMM PF00528; corresponds to BR0211 YP_005615065.1 identified by similarity to EGAD:24145; match to protein family HMM PF03070; corresponds to BR0212 YP_005615066.1 corresponds to BR0213 YP_005615067.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; corresponds to BR0214 YP_005615068.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; corresponds to BR0215 YP_005615069.1 identified by similarity to SP:O32583; match to protein family HMM PF02597; match to protein family HMM TIGR01683; corresponds to BR0216 YP_005615070.1 identified by match to protein family HMM PF01266; corresponds to BR0217 YP_005615071.1 identified by match to protein family HMM TIGR00097; corresponds to BR0218 YP_005615072.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; corresponds to BR0219 YP_005615073.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR00003; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; corresponds to BR0220 YP_005615074.1 identified by match to protein family HMM PF00376; corresponds to BR0221 YP_005615075.1 identified by match to protein family HMM PF00528; corresponds to BR0222 YP_005615076.1 identified by match to protein family HMM PF00005; corresponds to BR0223 YP_005615077.1 identified by similarity to SP:P33361; match to protein family HMM PF00528; corresponds to BR0224 YP_005615078.1 identified by similarity to GP:17983752; match to protein family HMM PF04069; corresponds to BR0225 YP_005615079.1 identified by similarity to OMNI:NTL02ML0782; corresponds to BR0226 YP_005615080.1 identified by similarity to EGAD:22862; match to protein family HMM PF00208; match to protein family HMM PF02812; corresponds to BR0227 YP_005615081.1 corresponds to BR0228 YP_005615082.1 identified by similarity to SP:P40875; match to protein family HMM PF01266; match to protein family HMM TIGR01373; corresponds to BR0229 YP_005615083.1 identified by similarity to EGAD:43131; match to protein family HMM PF04267; match to protein family HMM TIGR01374; corresponds to BR0230 YP_005615084.1 identified by similarity to EGAD:43132; match to protein family HMM PF01571; match to protein family HMM TIGR01372; corresponds to BR0231 YP_005615085.1 identified by similarity to EGAD:43133; match to protein family HMM PF04268; corresponds to BR0232 YP_005615086.1 identified by similarity to OMNI:NTL02ML5639; corresponds to BR0233 YP_005615087.1 identified by match to protein family HMM PF01614; corresponds to BR0234 YP_005615088.1 identified by match to protein family HMM PF01547; corresponds to BR0235 YP_005615089.1 identified by match to protein family HMM PF00528; corresponds to BR0236 YP_005615090.1 identified by match to protein family HMM PF00528; corresponds to BR0237 YP_005615091.1 identified by similarity to SP:Q00752; match to protein family HMM PF00005; match to protein family HMM PF03459; corresponds to BR0238 YP_005615092.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746; corresponds to BR0239 YP_005615093.1 identified by similarity to GP:15140572; match to protein family HMM PF05336; corresponds to BR0240 YP_005615094.1 identified by match to protein family HMM PF01408; corresponds to BR0241 YP_005615095.1 corresponds to BR0242 YP_005615096.1 identified by match to protein family HMM PF00106; corresponds to BR0243 YP_005615097.1 identified by similarity to GP:15140576; match to protein family HMM PF01557; corresponds to BR0244 YP_005615098.1 identified by match to protein family HMM PF01188; corresponds to BR0245 YP_005615099.1 corresponds to BR0246 YP_005615101.1 identified by similarity to OMNI:NTL02ML5069; match to protein family HMM PF03884; corresponds to BR0247 YP_005615102.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; corresponds to BR0248 YP_005615103.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; corresponds to BR0249 YP_005615104.1 identified by match to protein family HMM PF01451; corresponds to BR0250 YP_005615105.1 identified by similarity to OMNI:NTL02ML5073; corresponds to BR0251 YP_005615106.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; corresponds to BR0252 YP_005615107.1 identified by similarity to GP:15073540; corresponds to BR0253 YP_005615108.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; corresponds to BR0254 YP_005615109.1 identified by similarity to OMNI:NTL02ML5077; corresponds to BR0255 YP_005615110.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; corresponds to BR0256 YP_005615111.1 corresponds to BR0257 YP_005615112.1 identified by match to protein family HMM PF02498; corresponds to BR0258 YP_005615113.1 corresponds to BR0259 YP_005615114.1 identified by match to protein family HMM PF00239; corresponds to BR0260 YP_005615115.1 corresponds to BR0261 YP_005615116.1 corresponds to BR0262 YP_005615117.1 corresponds to BR0263 YP_005615118.1 identified by similarity to OMNI:NTL02ML3521; corresponds to BR0264 YP_005615119.1 corresponds to BR0265 YP_005615120.1 corresponds to BR0266 YP_005615121.1 identified by similarity to SP:P42888; match to protein family HMM PF01774; corresponds to BR0267 YP_005615122.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; corresponds to BR0268 YP_005615123.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; corresponds to BR0269 YP_005615124.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; corresponds to BR0270 YP_005615125.1 involved in the assembly of the urease metallocenter; possible nickel donor; corresponds to BR0271 YP_005615126.1 identified by similarity to SP:Q07402; match to protein family HMM PF01730; corresponds to BR0272 YP_005615127.1 identified by similarity to EGAD:19477; match to protein family HMM PF01495; match to protein family HMM TIGR00101; corresponds to BR0273 YP_005615128.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; corresponds to BR0274 YP_005615129.1 corresponds to BR0275 YP_005615130.1 identified by similarity to GP:15075163; match to protein family HMM TIGR01730; corresponds to BR0276 YP_005615131.1 identified by match to protein family HMM PF00873; corresponds to BR0277 YP_005615132.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; corresponds to BR0278 YP_005615133.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; corresponds to BR0279 YP_005615134.1 identified by match to protein family HMM PF00440; corresponds to BR0280 YP_005615135.1 identified by match to protein family HMM PF00293; corresponds to BR0281 YP_005615136.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; corresponds to BR0282 YP_005615137.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; corresponds to BR0283 YP_005615138.1 identified by similarity to GP:15073317; corresponds to BR0284 YP_005615139.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; corresponds to BR0285 YP_005615140.1 identified by similarity to GP:15073237; corresponds to BR0286 YP_005615141.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; corresponds to BR0287 YP_005615142.1 identified by similarity to OMNI:NTL03PA01240; corresponds to BR0288 YP_005615143.1 activates fatty acids by binding to coenzyme A; corresponds to BR0289 YP_005615144.1 identified by match to protein family HMM PF00440; corresponds to BR0290 YP_005615145.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; corresponds to BR0291 YP_005615146.1 identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915; corresponds to BR0292 YP_005615147.1 corresponds to BR0293 YP_005615148.1 corresponds to BR0294 YP_005615149.1 identified by match to protein family HMM PF00497; corresponds to BR0295 YP_005615150.1 identified by match to protein family HMM PF00535; corresponds to BR0296 YP_005615151.1 identified by similarity to GP:15155336; match to protein family HMM PF03976; corresponds to BR0297 YP_005615152.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; corresponds to BR0298 YP_005615153.1 identified by similarity to GP:15073446; corresponds to BR0299 YP_005615154.1 corresponds to BR0300 YP_005615155.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; corresponds to BR0301 YP_005615156.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; corresponds to BR0302 YP_005615157.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; corresponds to BR0303 YP_005615158.1 protein associated with Co2+ and Mg2+ efflux; corresponds to BR0304 YP_005615159.1 catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis; corresponds to BR0305 YP_005615160.1 Catalyzes the deamination of dCTP to form dUTP; corresponds to BR0306 YP_005615161.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965; corresponds to BR0307 YP_005615162.1 identified by similarity to GP:15155415; corresponds to BR0308 YP_005615163.1 identified by similarity to OMNI:NTL02ML6482; match to protein family HMM PF00188; corresponds to BR0309 YP_005615164.1 identified by similarity to EGAD:8949; match to protein family HMM PF01554; match to protein family HMM TIGR00797; corresponds to BR0310 YP_005615165.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; corresponds to BR0311 YP_005615166.1 identified by similarity to GP:15073480; corresponds to BR0312 YP_005615167.1 identified by similarity to OMNI:NTL02ML4408; corresponds to BR0313 YP_005615168.1 identified by similarity to EGAD:139406; match to protein family HMM PF00561; match to protein family HMM TIGR01249; corresponds to BR0314 YP_005615169.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; corresponds to BR0315 YP_005615170.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; corresponds to BR0316 YP_005615171.1 corresponds to BR0317 YP_005615172.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; corresponds to BR0318 YP_005615173.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; corresponds to BR0319 YP_005615174.1 identified by match to protein family HMM PF01522; corresponds to BR0320 YP_005615175.1 identified by similarity to GP:12837556; match to protein family HMM PF01755; corresponds to BR0321 YP_005615176.1 identified by similarity to GP:15157577; corresponds to BR0322 YP_005615177.1 corresponds to BR0323 YP_005615178.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; corresponds to BR0324 YP_005615179.1 identified by similarity to OMNI:NTL03PA03432; match to protein family HMM PF03788; corresponds to BR0325 YP_005615180.1 identified by similarity to OMNI:NTL03PA03431; match to protein family HMM PF04172; corresponds to BR0326 YP_005615181.1 corresponds to BR0327 YP_005615182.1 identified by similarity to GP:15155313; corresponds to BR0328 YP_005615183.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; corresponds to BR0329 YP_005615184.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; corresponds to BR0330 YP_005615185.1 identified by similarity to SP:Q44532; match to protein family HMM PF00175; match to protein family HMM PF00970; corresponds to BR0331 YP_005615186.1 corresponds to BR0332 YP_005615187.1 corresponds to BR0333 YP_005615188.1 identified by similarity to EGAD:19651; match to protein family HMM PF00278; match to protein family HMM TIGR01047; corresponds to BR0334 YP_005615189.1 identified by similarity to GP:15141437; match to protein family HMM PF03435; corresponds to BR0335 YP_005615190.1 corresponds to BR0336 YP_005615191.1 identified by similarity to GP:9695312; match to protein family HMM PF05544; corresponds to BR0337 YP_005615192.1 corresponds to BR0338 YP_005615193.1 identified by similarity to SP:O82855; match to protein family HMM PF01554; match to protein family HMM TIGR00797; corresponds to BR0339 YP_005615194.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; corresponds to BR0342 YP_005615195.1 identified by similarity to GP:15162042; match to protein family HMM PF04290; corresponds to BR0343 YP_005615196.1 identified by match to protein family HMM TIGR00786; corresponds to BR0344 YP_005615197.1 identified by match to protein family HMM PF03480; match to protein family HMM TIGR01409; corresponds to BR0345 YP_005615198.1 identified by similarity to OMNI:NTL02ML3955; corresponds to BR0346 YP_005615199.1 identified by similarity to OMNI:NTL02ML3956; match to protein family HMM PF01522; corresponds to BR0347 YP_005615200.1 identified by similarity to GP:15140674; corresponds to BR0348 YP_005615201.1 identified by similarity to OMNI:NTL02ML3958; match to protein family HMM PF00111; match to protein family HMM PF00941; match to protein family HMM PF01799; match to protein family HMM PF03450; corresponds to BR0349 YP_005615202.1 identified by match to protein family HMM PF01315; match to protein family HMM PF02738; corresponds to BR0350 YP_005615203.1 identified by similarity to OMNI:CC2617; corresponds to BR0351 YP_005615204.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; corresponds to BR0352 YP_005615205.1 identified by similarity to GP:15140681; corresponds to BR0353 YP_005615206.1 Catalyzes the deamination of guanine; corresponds to BR0354 YP_005615207.1 identified by similarity to EGAD:40602; match to protein family HMM PF05161; corresponds to BR0355 YP_005615208.1 identified by match to protein family HMM PF03597; match to protein family HMM TIGR00847; corresponds to BR0356 YP_005615209.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; corresponds to BR0357 YP_005615210.1 identified by similarity to EGAD:10086; match to protein family HMM PF05751; corresponds to BR0358 YP_005615211.1 corresponds to BR0359 YP_005615212.1 identified by match to protein family HMM PF00034; match to protein family HMM TIGR00782; corresponds to BR0360 YP_005615213.1 identified by similarity to EGAD:125983; match to protein family HMM PF05545; corresponds to BR0361 YP_005615214.1 identified by match to protein family HMM PF02433; match to protein family HMM TIGR00781; corresponds to BR0362 YP_005615215.1 identified by match to protein family HMM PF00115; match to protein family HMM TIGR00780; corresponds to BR0363 YP_005615216.1 identified by match to protein family HMM PF01475; corresponds to BR0364 YP_005615217.1 corresponds to BR0365 YP_005615218.1 identified by similarity to GP:13235366; match to protein family HMM PF01323; match to protein family HMM TIGR01409; corresponds to BR0366 YP_005615219.1 identified by match to protein family HMM PF00171; corresponds to BR0367 YP_005615220.1 identified by similarity to EGAD:7337; match to protein family HMM PF00165; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM TIGR00589; corresponds to BR0368 YP_005615221.1 identified by similarity to GP:15073235; match to protein family HMM PF03960; match to protein family HMM TIGR01617; corresponds to BR0369 YP_005615222.1 identified by similarity to GP:15156192; corresponds to BR0370 YP_005615223.1 in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; corresponds to BR0372 YP_005615224.1 identified by similarity to OMNI:NTL02ML5836; corresponds to BR0373 YP_005615225.1 identified by similarity to OMNI:NTL02ML5837; corresponds to BR0374 YP_005615226.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; corresponds to BR0375 YP_005615227.1 identified by similarity to SP:P04475; corresponds to BR0376 YP_005615228.1 corresponds to BR0377 YP_005615229.1 identified by similarity to GP:14026921; corresponds to BR0378 YP_005615230.1 corresponds to BR0379 YP_005615231.1 corresponds to BR0380 YP_005615232.1 identified by similarity to EGAD:21946; corresponds to BR0381 YP_005615233.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; corresponds to BR0382 YP_005615234.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; corresponds to BR0383 YP_005615235.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; corresponds to BR0384 YP_005615236.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; corresponds to BR0385 YP_005615237.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; corresponds to BR0386 YP_005615238.1 identified by similarity to GP:15073771; match to protein family HMM PF04055; corresponds to BR0387 YP_005615239.1 identified by similarity to GP:15155690; corresponds to BR0388 YP_005615240.1 corresponds to BR0389 YP_005615241.1 corresponds to BR0390 YP_005615242.1 corresponds to BR0391 YP_005615243.1 corresponds to BR0392 YP_005615244.1 corresponds to BR0393 YP_005615245.1 identified by match to protein family HMM PF00288; match to protein family HMM TIGR00154; corresponds to BR0394 YP_005615246.1 corresponds to BR0395 YP_005615247.1 identified by match to protein family HMM PF01343; corresponds to BR0396 YP_005615248.1 identified by similarity to SP:P13738; match to protein family HMM TIGR00773; corresponds to BR0397 YP_005615249.1 corresponds to BR0398 YP_005615250.1 identified by similarity to GP:15073779; corresponds to BR0399 YP_005615251.1 identified by similarity to GP:15073778; corresponds to BR0400 YP_005615252.1 identified by match to protein family HMM PF00348; corresponds to BR0401 YP_005615253.1 identified by match to protein family HMM PF00515; corresponds to BR0402 YP_005615254.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; corresponds to BR0403 YP_005615255.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; corresponds to BR0404 YP_005615256.1 identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; corresponds to BR0405 YP_005615257.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; corresponds to BR0406 YP_005615258.1 identified by similarity to OMNI:VCA0423; match to protein family HMM PF05016; corresponds to BR0407 YP_005615259.1 identified by similarity to GP:3337067; corresponds to BR0408 YP_005615260.1 corresponds to BR0409 YP_005615261.1 identified by similarity to GP:15155604; corresponds to BR0410 YP_005615262.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; corresponds to BR0411 YP_005615263.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; corresponds to BR0412 YP_005615264.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; corresponds to BR0414 YP_005615265.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; corresponds to BR0415 YP_005615266.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; corresponds to BR0416 YP_005615267.1 identified by similarity to GP:14026958; corresponds to BR0417 YP_005615268.1 identified by match to protein family HMM PF00226; match to protein family HMM PF01556; corresponds to BR0418 YP_005615269.1 corresponds to BR0419 YP_005615270.1 Catalyzes a key regulatory step in fatty acid biosynthesis; corresponds to BR0420 YP_005615271.1 corresponds to BR0422 YP_005615272.1 corresponds to BR0424 YP_005615273.1 identified by similarity to GP:15160282; corresponds to BR0425 YP_005615274.1 identified by similarity to GP:14027592; match to protein family HMM PF04028; corresponds to BR0426 YP_005615275.1 identified by similarity to GP:15073831; corresponds to BR0427 YP_005615276.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; corresponds to BR0428 YP_005615277.1 identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00506; corresponds to BR0429 YP_005615278.1 identified by match to protein family HMM PF00850; corresponds to BR0430 YP_005615279.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; corresponds to BR0431 YP_005615280.1 identified by match to protein family HMM PF00597; corresponds to BR0432 YP_005615281.1 identified by similarity to OMNI:NTL02ML3629; match to protein family HMM PF04226; corresponds to BR0433 YP_005615282.1 identified by similarity to OMNI:NTL02ML3630; corresponds to BR0434 YP_005615283.1 identified by similarity to OMNI:CC3178; match to protein family HMM PF02678; match to protein family HMM PF05726; corresponds to BR0435 YP_005615284.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; corresponds to BR0436 YP_005615285.1 identified by similarity to EGAD:20008; match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478; corresponds to BR0437 YP_005615286.1 corresponds to BR0438 YP_005615287.1 identified by similarity to GP:15074050; match to protein family HMM PF03641; match to protein family HMM TIGR00730; corresponds to BR0439 YP_005615288.1 identified by similarity to GP:15157092; corresponds to BR0440 YP_005615289.1 identified by match to protein family HMM PF01476; corresponds to BR0441 YP_005615290.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; corresponds to BR0442 YP_005615291.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; corresponds to BR0443 YP_005615292.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; corresponds to BR0444 YP_005615293.1 identified by match to protein family HMM PF00106; corresponds to BR0445 YP_005615294.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; corresponds to BR0446 YP_005615295.1 corresponds to BR0447 YP_005615296.1 identified by similarity to OMNI:NTL02ML6179; match to protein family HMM PF02674; corresponds to BR0448 YP_005615297.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; corresponds to BR0449 YP_005615298.1 unwinds double stranded DNA; corresponds to BR0450 YP_005615299.1 identified by similarity to SP:P30010; match to protein family HMM PF02353; corresponds to BR0451 YP_005615300.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; corresponds to BR0452 YP_005615301.1 identified by similarity to GP:15074068; corresponds to BR0453 YP_005615302.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; corresponds to BR0454 YP_005615303.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; corresponds to BR0455 YP_005615304.1 identified by similarity to OMNI:VC2163; corresponds to BR0456 YP_005615305.1 identified by similarity to EGAD:97846; match to protein family HMM PF00698; match to protein family HMM TIGR00128; corresponds to BR0457 YP_005615306.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; corresponds to BR0458 YP_005615307.1 carries the fatty acid chain in fatty acid biosynthesis; corresponds to BR0459 YP_005615308.1 corresponds to BR0460 YP_005615309.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; corresponds to BR0461 YP_005615310.1 identified by similarity to GP:15074077; match to protein family HMM PF02618; match to protein family HMM TIGR00247; corresponds to BR0462 YP_005615311.1 identified by similarity to OMNI:NTL02ML6198; match to protein family HMM PF03755; match to protein family HMM TIGR00255; corresponds to BR0463 YP_005615312.1 Essential for recycling GMP and indirectly, cGMP; corresponds to BR0464 YP_005615313.1 identified by similarity to EGAD:30245; match to protein family HMM PF01523; corresponds to BR0465 YP_005615314.1 identified by similarity to GP:15073834; corresponds to BR0466 YP_005615315.1 identified by similarity to EGAD:8295; match to protein family HMM PF00116; match to protein family HMM PF02790; corresponds to BR0467 YP_005615316.1 identified by similarity to EGAD:5976; match to protein family HMM PF00115; corresponds to BR0468 YP_005615317.1 converts protoheme IX and farnesyl diphosphate to heme O; corresponds to BR0469 YP_005615318.1 identified by similarity to OMNI:NTL02ML5908; corresponds to BR0470 YP_005615319.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; corresponds to BR0471 YP_005615320.1 identified by match to protein family HMM PF00510; corresponds to BR0472 YP_005615321.1 identified by similarity to GP:14026992; corresponds to BR0473 YP_005615322.1 identified by match to protein family HMM PF02104; corresponds to BR0474 YP_005615323.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; corresponds to BR0475 YP_005615324.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; corresponds to BR0476 YP_005615325.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; corresponds to BR0477 YP_005615326.1 identified by match to protein family HMM PF00578; corresponds to BR0478 YP_005615327.1 identified by similarity to OMNI:NTL02ML5920; corresponds to BR0479 YP_005615328.1 identified by similarity to OMNI:NTL02ML5921; match to protein family HMM PF02622; corresponds to BR0480 YP_005615329.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; corresponds to BR0481 YP_005615330.1 identified by match to protein family HMM PF00583; corresponds to BR0482 YP_005615331.1 identified by similarity to OMNI:NTL01BH2408; match to protein family HMM PF00675; match to protein family HMM PF05193; corresponds to BR0483 YP_005615332.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; corresponds to BR0484 YP_005615333.1 corresponds to BR0485 YP_005615334.1 corresponds to BR0486 YP_005615335.1 identified by similarity to OMNI:NTL03PA02200; match to protein family HMM PF00563; corresponds to BR0487 YP_005615336.1 identified by similarity to OMNI:NTL02ML1736; corresponds to BR0488 YP_005615337.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; corresponds to BR0489 YP_005615338.1 identified by match to protein family HMM PF00654; corresponds to BR0490 YP_005615339.1 identified by similarity to EGAD:154344; match to protein family HMM PF01555; corresponds to BR0491 YP_005615340.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; corresponds to BR0492 YP_005615341.1 identified by similarity to EGAD:19424; match to protein family HMM PF00730; match to protein family HMM TIGR01084; corresponds to BR0493 YP_005615342.1 identified by similarity to GP:15073860; corresponds to BR0494 YP_005615343.1 corresponds to BR0495 YP_005615344.1 identified by similarity to GP:15155781; match to protein family HMM PF01323; match to protein family HMM TIGR01409; corresponds to BR0496 YP_005615345.1 identified by similarity to OMNI:NTL02ML5933; match to protein family HMM PF02463; match to protein family HMM PF02483; match to protein family HMM TIGR02168; corresponds to BR0497 YP_005615346.1 identified by similarity to SP:P13512; match to protein family HMM PF01545; match to protein family HMM TIGR01297; corresponds to BR0498 YP_005615347.1 identified by match to protein family HMM PF00903; corresponds to BR0499 YP_005615348.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; corresponds to BR0500 YP_005615349.1 corresponds to BR0502 YP_005615350.1 corresponds to BR0503 YP_005615351.1 identified by similarity to OMNI:NTL02ML5941; corresponds to BR0504 YP_005615352.1 identified by match to protein family HMM PF00753; corresponds to BR0505 YP_005615353.1 identified by match to protein family HMM PF02632; corresponds to BR0506 YP_005615354.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; corresponds to BR0507 YP_005615355.1 identified by similarity to GP:15157490; match to protein family HMM PF00576; corresponds to BR0508 YP_005615356.1 identified by similarity to GP:15157607; corresponds to BR0509 YP_005615357.1 identified by similarity to GP:6009656; match to protein family HMM PF02719; corresponds to BR0510 YP_005615358.1 identified by match to protein family HMM PF00953; corresponds to BR0511 YP_005615362.1 identified by match to protein family HMM PF00551; corresponds to BR0517 YP_005615363.1 identified by similarity to GP:4071215; corresponds to BR0518 YP_005615364.1 identified by similarity to SP:Q56903; match to protein family HMM PF00005; corresponds to BR0519 YP_005615365.1 identified by similarity to SP:Q56902; match to protein family HMM PF01061; corresponds to BR0520 YP_005615366.1 identified by similarity to EGAD:15706; match to protein family HMM PF01041; corresponds to BR0521 YP_005615367.1 identified by similarity to EGAD:11583; match to protein family HMM TIGR01472; corresponds to BR0522 YP_005615368.1 identified by similarity to GP:4071219; corresponds to BR0523 YP_005615370.1 identified by similarity to EGAD:46813; corresponds to BR0526 YP_005615371.1 identified by similarity to PIR:PN0685; match to protein family HMM PF01609; corresponds to BR0527 YP_005615372.1 identified by match to protein family HMM PF00534; corresponds to BR0529 YP_005615373.1 identified by similarity to EGAD:36179; corresponds to BR0530 YP_005615374.1 identified by similarity to GP:482819; corresponds to BR0531 YP_005615375.1 identified by similarity to GP:4071219; corresponds to BR0533 YP_005615376.1 identified by similarity to GP:4071222; match to protein family HMM PF01609; corresponds to BR0534 YP_005615377.1 identified by similarity to EGAD:8806; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; corresponds to BR0537 YP_005615378.1 identified by similarity to EGAD:97081; match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM TIGR01479; corresponds to BR0538 YP_005615379.1 identified by similarity to SP:P29954; corresponds to BR0539 YP_005615380.1 identified by similarity to GP:3249553; match to protein family HMM PF00534; corresponds to BR0540 YP_005615381.1 corresponds to BR0541 YP_005615382.1 identified by similarity to SP:P04983; match to protein family HMM PF00005; corresponds to BR0542 YP_005615383.1 identified by similarity to SP:P36948; match to protein family HMM PF02653; corresponds to BR0543 YP_005615384.1 identified by similarity to SP:P02926; match to protein family HMM PF00532; corresponds to BR0544 YP_005615385.1 identified by similarity to GP:15075918; corresponds to BR0545 YP_005615386.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; corresponds to BR0546 YP_005615387.1 catalyzes the interconversion of D-xylose to D-xylulose; corresponds to BR0547 YP_005615388.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312; corresponds to BR0548 YP_005615389.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; corresponds to BR0549 YP_005615390.1 identified by match to protein family HMM PF00165; corresponds to BR0550 YP_005615391.1 corresponds to BR0551 YP_005615392.1 catalyzes the formation of betaine from betaine aldehyde; corresponds to BR0552 YP_005615393.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; corresponds to BR0553 YP_005615394.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; corresponds to BR0554 YP_005615395.1 identified by similarity to OMNI:NTL02ML6007; corresponds to BR0555 YP_005615396.1 identified by match to protein family HMM PF01272; corresponds to BR0556 YP_005615397.1 identified by similarity to EGAD:69439; match to protein family HMM PF05012; match to protein family HMM TIGR01550; corresponds to BR0557 YP_005615398.1 identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; corresponds to BR0558 YP_005615399.1 identified by similarity to GP:15620053; match to protein family HMM PF01544; corresponds to BR0559 YP_005615400.1 identified by match to protein family HMM PF00392; corresponds to BR0560 YP_005615401.1 corresponds to BR0561 YP_005615402.1 identified by similarity to GP:15073896; corresponds to BR0562 YP_005615403.1 identified by similarity to OMNI:NTL02ML6012; match to protein family HMM PF05872; corresponds to BR0563 YP_005615404.1 identified by similarity to GP:15141233; match to protein family HMM PF03734; match to protein family HMM TIGR01409; corresponds to BR0564 YP_005615405.1 identified by similarity to SP:Q51645; match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493; corresponds to BR0565 YP_005615406.1 identified by match to protein family HMM PF00081; match to protein family HMM PF02777; corresponds to BR0566 YP_005615407.1 corresponds to BR0567 YP_005615408.1 identified by similarity to EGAD:17797; match to protein family HMM PF00326; match to protein family HMM PF02897; corresponds to BR0568 YP_005615409.1 identified by similarity to EGAD:35422; match to protein family HMM PF05443; corresponds to BR0569 YP_005615410.1 corresponds to BR0570 YP_005615411.1 corresponds to BR0571 YP_005615412.1 identified by similarity to GP:15155912; corresponds to BR0572 YP_005615413.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; corresponds to BR0573 YP_005615414.1 identified by similarity to OMNI:NTL02ML6032; match to protein family HMM PF02657; corresponds to BR0574 YP_005615415.1 identified by similarity to SP:Q52968; corresponds to BR0575 YP_005615416.1 corresponds to BR0576 YP_005615417.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; corresponds to BR0577 YP_005615418.1 identified by match to protein family HMM PF01471; corresponds to BR0578 YP_005615419.1 corresponds to BR0579 YP_005615420.1 identified by similarity to GP:15073936; corresponds to BR0580 YP_005615421.1 identified by similarity to GP:15073939; corresponds to BR0581 YP_005615422.1 identified by similarity to OMNI:NTL02ML6040; corresponds to BR0582 YP_005615423.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; corresponds to BR0583 YP_005615424.1 corresponds to BR0584 YP_005615425.1 corresponds to BR0585 YP_005615426.1 identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537; corresponds to BR0586 YP_005615427.1 identified by similarity to GP:15155959; corresponds to BR0587 YP_005615428.1 identified by match to protein family HMM PF04586; match to protein family HMM TIGR01543; corresponds to BR0588 YP_005615429.1 identified by match to protein family HMM TIGR01554; corresponds to BR0589 YP_005615430.1 identified by similarity to GP:15155962; corresponds to BR0590 YP_005615431.1 identified by similarity to GP:15155963; match to protein family HMM TIGR01563; corresponds to BR0591 YP_005615432.1 corresponds to BR0592 YP_005615433.1 identified by similarity to GP:15155964; corresponds to BR0593 YP_005615434.1 identified by similarity to OMNI:CC2781; match to protein family HMM TIGR02126; corresponds to BR0594 YP_005615435.1 identified by similarity to GP:15155967; corresponds to BR0595 YP_005615436.1 identified by similarity to GP:15155972; corresponds to BR0597 YP_005615437.1 identified by similarity to GP:15155973; corresponds to BR0598 YP_005615438.1 identified by similarity to GP:15155974; corresponds to BR0599 YP_005615439.1 identified by match to protein family HMM PF00877; corresponds to BR0600 YP_005615440.1 identified by similarity to GP:15155977; corresponds to BR0602 YP_005615441.1 identified by similarity to OMNI:NTL02ML6060; corresponds to BR0603 YP_005615442.1 identified by similarity to OMNI:CC2766; match to protein family HMM PF00072; match to protein family HMM PF00486; corresponds to BR0604 YP_005615443.1 identified by similarity to GP:14027143; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; corresponds to BR0605 YP_005615444.1 identified by similarity to GP:15073947; corresponds to BR0606 YP_005615445.1 corresponds to BR0607 YP_005615446.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; corresponds to BR0608 YP_005615447.1 identified by similarity to EGAD:8346; match to protein family HMM PF01578; match to protein family HMM TIGR00353; corresponds to BR0609 YP_005615448.1 identified by similarity to SP:P45406; match to protein family HMM PF03918; corresponds to BR0610 YP_005615449.1 identified by similarity to EGAD:21403; match to protein family HMM PF00089; match to protein family HMM PF00595; corresponds to BR0611 YP_005615450.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; corresponds to BR0612 YP_005615451.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; corresponds to BR0613 YP_005615452.1 identified by similarity to EGAD:7704; match to protein family HMM PF03710; corresponds to BR0614 YP_005615453.1 identified by similarity to GP:15156909; match to protein family HMM PF01755; match to protein family HMM PF04932; corresponds to BR0615 YP_005615454.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF02518; match to protein family HMM TIGR00229; corresponds to BR0616 YP_005615455.1 identified by similarity to OMNI:NTL02ML6073; match to protein family HMM PF01433; corresponds to BR0617 YP_005615456.1 identified by match to protein family HMM PF00892; corresponds to BR0618 YP_005615457.1 identified by match to protein family HMM PF00083; corresponds to BR0619 YP_005615458.1 identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; corresponds to BR0620 YP_005615459.1 identified by similarity to EGAD:4120; match to protein family HMM PF05187; corresponds to BR0621 YP_005615460.1 identified by similarity to OMNI:NTL02ML6082; match to protein family HMM PF03372; corresponds to BR0622 YP_005615461.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; corresponds to BR0623 YP_005615462.1 corresponds to BR0624 YP_005615463.1 corresponds to BR0625 YP_005615464.1 identified by similarity to OMNI:CC2434; match to protein family HMM PF00043; match to protein family HMM PF02798; corresponds to BR0626 YP_005615465.1 identified by similarity to GP:15073978; corresponds to BR0627 YP_005615466.1 corresponds to BR0628 YP_005615467.1 identified by similarity to OMNI:NTL02ML6087; corresponds to BR0629 YP_005615468.1 identified by similarity to OMNI:VC0940; match to protein family HMM PF02588; corresponds to BR0630 YP_005615469.1 corresponds to BR0631 YP_005615470.1 corresponds to BR0632 YP_005615471.1 identified by similarity to OMNI:NTL02ML2997; corresponds to BR0633 YP_005615472.1 identified by similarity to OMNI:NTL02ML6597; match to protein family HMM PF04241; corresponds to BR0634 YP_005615473.1 catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate; corresponds to BR0635 YP_005615474.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; corresponds to BR0636 YP_005615475.1 identified by similarity to GP:841493; match to protein family HMM PF02530; corresponds to BR0637 YP_005615476.1 corresponds to BR0638 YP_005615477.1 identified by similarity to GP:841494; match to protein family HMM PF02530; corresponds to BR0639 YP_005615478.1 corresponds to BR0640 YP_005615479.1 corresponds to BR0641 YP_005615480.1 identified by similarity to EGAD:126787; corresponds to BR0642 YP_005615481.1 identified by match to protein family HMM PF01464; corresponds to BR0643 YP_005615482.1 corresponds to BR0644 YP_005615483.1 corresponds to BR0645 YP_005615484.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; corresponds to BR0646 YP_005615485.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; corresponds to BR0647 YP_005615486.1 identified by match to protein family HMM PF03167; corresponds to BR0648 YP_005615487.1 identified by match to protein family HMM PF01936; corresponds to BR0649 YP_005615488.1 corresponds to BR0650 YP_005615489.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; corresponds to BR0651 YP_005615490.1 identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; corresponds to BR0652 YP_005615491.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; corresponds to BR0653 YP_005615492.1 identified by match to protein family HMM PF00027; match to protein family HMM PF00325; corresponds to BR0654 YP_005615493.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; corresponds to BR0655 YP_005615494.1 identified by similarity to EGAD:36955; corresponds to BR0656 YP_005615495.1 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; corresponds to BR0657 YP_005615496.1 identified by similarity to GP:14027200; corresponds to BR0658 YP_005615497.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; corresponds to BR0659 YP_005615498.1 identified by similarity to OMNI:NTL02ML6121; match to protein family HMM PF00461; corresponds to BR0660 YP_005615499.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; corresponds to BR0661 YP_005615500.1 corresponds to BR0662 YP_005615501.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; corresponds to BR0663 YP_005615502.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; corresponds to BR0664 YP_005615503.1 identified by similarity to GP:15074034; corresponds to BR0665 YP_005615504.1 identified by similarity to OMNI:NTL02ML6141; corresponds to BR0666 YP_005615505.1 identified by match to protein family HMM PF01571; corresponds to BR0667 YP_005615506.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; corresponds to BR0668 YP_005615507.1 identified by similarity to GP:14027225; corresponds to BR0669 YP_005615508.1 identified by similarity to GP:15074038; corresponds to BR0670 YP_005615509.1 identified by similarity to OMNI:NTL02ML6146; corresponds to BR0671 YP_005615510.1 identified by match to protein family HMM PF00293; corresponds to BR0672 YP_005615511.1 identified by similarity to EGAD:107474; match to protein family HMM PF02586; corresponds to BR0673 YP_005615512.1 identified by match to protein family HMM PF01810; corresponds to BR0674 YP_005615513.1 corresponds to BR0675 YP_005615514.1 corresponds to BR0676 YP_005615515.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; corresponds to BR0677 YP_005615516.1 corresponds to BR0678 YP_005615517.1 catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA; corresponds to BR0679 YP_005615518.1 identified by match to protein family HMM PF00892; match to protein family HMM TIGR00688; corresponds to BR0680 YP_005615519.1 identified by match to protein family HMM PF01551; corresponds to BR0681 YP_005615520.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; corresponds to BR0682 YP_005615521.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); corresponds to BR0683 YP_005615522.1 corresponds to BR0684 YP_005615523.1 identified by similarity to EGAD:7471; match to protein family HMM PF04453; corresponds to BR0685 YP_005615524.1 identified by similarity to OMNI:NTL02ML6205; match to protein family HMM PF03739; corresponds to BR0686 YP_005615525.1 identified by match to protein family HMM PF03739; corresponds to BR0687 YP_005615526.1 corresponds to BR0688 YP_005615527.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; corresponds to BR0689 YP_005615528.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; corresponds to BR0690 YP_005615529.1 identified by similarity to OMNI:NTL02ML6220; corresponds to BR0691 YP_005615530.1 identified by match to protein family HMM PF00005; corresponds to BR0692 YP_005615531.1 identified by similarity to OMNI:NTL02ML6242; match to protein family HMM PF05163; corresponds to BR0693 YP_005615532.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; corresponds to BR0694 YP_005615533.1 identified by similarity to GP:14027320; match to protein family HMM PF03724; corresponds to BR0695 YP_005615534.1 identified by similarity to SP:P30749; match to protein family HMM PF02391; corresponds to BR0696 YP_005615535.1 identified by match to protein family HMM PF02597; match to protein family HMM TIGR01682; corresponds to BR0697 YP_005615536.1 identified by similarity to SP:P06978; match to protein family HMM PF01066; match to protein family HMM TIGR00560; corresponds to BR0698 YP_005615537.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal is responsible for the 3' incision and the C-terminal is responsible for the 5' incision; corresponds to BR0699 YP_005615538.1 identified by match to protein family HMM PF00106; corresponds to BR0700 YP_005615539.1 identified by similarity to SP:Q45689; match to protein family HMM PF01389; corresponds to BR0701 YP_005615540.1 identified by similarity to OMNI:CC0147; match to protein family HMM PF02798; corresponds to BR0702 YP_005615541.1 identified by match to protein family HMM PF00445; corresponds to BR0703 YP_005615542.1 identified by similarity to OMNI:NTL02ML6225; corresponds to BR0704 YP_005615543.1 identified by similarity to OMNI:NTL02ML6221; match to protein family HMM PF04378; corresponds to BR0705 YP_005615544.1 identified by similarity to GP:15074178; match to protein family HMM PF00892; corresponds to BR0706 YP_005615545.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; corresponds to BR0707 YP_005615546.1 identified by similarity to OMNI:NTL02ML2404; corresponds to BR0708 YP_005615547.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; corresponds to BR0709 YP_005615548.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; corresponds to BR0710 YP_005615549.1 corresponds to BR0711 YP_005615550.1 corresponds to BR0712 YP_005615551.1 identified by match to protein family HMM PF01594; corresponds to BR0713 YP_005615552.1 identified by similarity to GP:14027358; corresponds to BR0714 YP_005615553.1 corresponds to BR0715 YP_005615554.1 corresponds to BR0716 YP_005615555.1 identified by match to protein family HMM PF00106; corresponds to BR0717 YP_005615556.1 corresponds to BR0718 YP_005615557.1 corresponds to BR0719 YP_005615558.1 identified by similarity to SP:P33231; match to protein family HMM PF02652; match to protein family HMM TIGR00795; corresponds to BR0720 YP_005615559.1 identified by similarity to GP:15074650; match to protein family HMM PF04800; corresponds to BR0721 YP_005615560.1 corresponds to BR0722 YP_005615561.1 identified by match to protein family HMM PF00929; corresponds to BR0723 YP_005615562.1 identified by similarity to EGAD:40466; corresponds to BR0724 YP_005615563.1 identified by match to protein family HMM PF00583; corresponds to BR0725 YP_005615564.1 identified by match to protein family HMM PF01381; corresponds to BR0726 YP_005615565.1 corresponds to BR0727 YP_005615566.1 corresponds to BR0728 YP_005615567.1 identified by match to protein family HMM PF00665; corresponds to BR0729 YP_005615568.1 identified by similarity to GP:11071899; corresponds to BR0730 YP_005615569.1 corresponds to BR0731 YP_005615570.1 corresponds to BR0732 YP_005615571.1 corresponds to BR0733 YP_005615572.1 corresponds to BR0734 YP_005615573.1 corresponds to BR0735 YP_005615574.1 identified by similarity to GP:15162152; corresponds to BR0736 YP_005615575.1 corresponds to BR0737 YP_005615576.1 corresponds to BR0738 YP_005615577.1 catalyzes the formation of L-homocysteine from cystathionine; corresponds to BR0739 YP_005615578.1 identified by match to protein family HMM PF01569; corresponds to BR0740 YP_005615579.1 identified by similarity to EGAD:35379; match to protein family HMM PF00497; match to protein family HMM TIGR01096; corresponds to BR0741 YP_005615580.1 corresponds to BR0742 YP_005615581.1 identified by similarity to EGAD:35466; match to protein family HMM PF00528; match to protein family HMM TIGR01726; corresponds to BR0743 YP_005615582.1 identified by similarity to SP:P45768; match to protein family HMM PF00528; match to protein family HMM TIGR01726; corresponds to BR0744 YP_005615583.1 identified by similarity to EGAD:31037; match to protein family HMM PF00005; corresponds to BR0745 YP_005615584.1 catalyzes the formation of catechol from salicylate; corresponds to BR0746 YP_005615585.1 identified by similarity to GP:15074414; corresponds to BR0747 YP_005615586.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; corresponds to BR0748 YP_005615587.1 identified by match to protein family HMM PF02541; corresponds to BR0749 YP_005615588.1 identified by similarity to GP:17739552; match to protein family HMM PF00570; match to protein family HMM PF01612; match to protein family HMM TIGR01388; corresponds to BR0750 YP_005615589.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; corresponds to BR0751 YP_005615590.1 identified by similarity to GP:14027664; corresponds to BR0752 YP_005615591.1 corresponds to BR0753 YP_005615592.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; corresponds to BR0754 YP_005615593.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; corresponds to BR0755 YP_005615594.1 identified by similarity to OMNI:NTL02ML6587; corresponds to BR0756 YP_005615595.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; corresponds to BR0757 YP_005615596.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; corresponds to BR0758 YP_005615597.1 identified by similarity to OMNI:NTL02ML6608; corresponds to BR0759 YP_005615598.1 identified by match to protein family HMM PF01047; corresponds to BR0760 YP_005615599.1 corresponds to BR0761 YP_005615600.1 identified by match to protein family HMM PF01471; match to protein family HMM TIGR01409; corresponds to BR0762 YP_005615601.1 corresponds to BR0763 YP_005615602.1 corresponds to BR0764 YP_005615603.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; corresponds to BR0765 YP_005615604.1 identified by similarity to GP:14027700; match to protein family HMM PF03477; match to protein family HMM TIGR00244; corresponds to BR0766 YP_005615605.1 identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00326; corresponds to BR0767 YP_005615606.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; corresponds to BR0768 YP_005615607.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; corresponds to BR0769 YP_005615608.1 Regulates rRNA biosynthesis by transcriptional antitermination; corresponds to BR0770 YP_005615609.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; corresponds to BR0771 YP_005615610.1 identified by similarity to GP:15074151; match to protein family HMM PF04355; corresponds to BR0772 YP_005615611.1 identified by similarity to OMNI:NTL02ML6629; match to protein family HMM PF03981; corresponds to BR0773 YP_005615612.1 identified by similarity to GP:15074153; corresponds to BR0774 YP_005615613.1 corresponds to BR0775 YP_005615614.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; corresponds to BR0776 YP_005615615.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; corresponds to BR0777 YP_005615616.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; corresponds to BR0778 YP_005615617.1 identified by similarity to OMNI:NTL02ML6634; corresponds to BR0779 YP_005615618.1 identified by similarity to SP:P30743; match to protein family HMM PF00893; corresponds to BR0780 YP_005615619.1 identified by match to protein family HMM PF02397; corresponds to BR0781 YP_005615620.1 identified by similarity to GP:14027725; corresponds to BR0782 YP_005615621.1 identified by similarity to EGAD:19692; match to protein family HMM PF02563; corresponds to BR0783 YP_005615622.1 corresponds to BR0784 YP_005615623.1 corresponds to BR0785 YP_005615624.1 identified by similarity to OMNI:NTL02ML6654; corresponds to BR0786 YP_005615625.1 identified by match to protein family HMM PF02628; corresponds to BR0787 YP_005615626.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; corresponds to BR0788 YP_005615627.1 catalyzes the formation of putrescine from agmatine; corresponds to BR0789 YP_005615628.1 forms a direct contact with the tRNA during translation; corresponds to BR0790 YP_005615629.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; corresponds to BR0791 YP_005615630.1 identified by similarity to OMNI:NTL02ML6663; match to protein family HMM PF03061; match to protein family HMM TIGR00369; corresponds to BR0792 YP_005615631.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; corresponds to BR0793 YP_005615632.1 corresponds to BR0794 YP_005615633.1 corresponds to BR0795 YP_005615634.1 corresponds to BR0796 YP_005615635.1 corresponds to BR0797 YP_005615636.1 corresponds to BR0798 YP_005615637.1 corresponds to BR0799 YP_005615638.1 corresponds to BR0800 YP_005615639.1 corresponds to BR0801 YP_005615640.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0802 YP_005615641.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; corresponds to BR0803 YP_005615642.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0804 YP_005615643.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0805 YP_005615644.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0806 YP_005615645.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; corresponds to BR0807 YP_005615646.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0808 YP_005615647.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0809 YP_005615648.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0810 YP_005615649.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0811 YP_005615650.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0812 YP_005615651.1 Catalyzes the transfer of electrons from NADH to ubiquinone; corresponds to BR0813 YP_005615652.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0814 YP_005615653.1 Catalyzes the transfer of electrons from NADH to quinone; corresponds to BR0815 YP_005615654.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; corresponds to BR0816 YP_005615655.1 identified by match to protein family HMM PF00753; corresponds to BR0817 YP_005615656.1 identified by match to protein family HMM PF00903; corresponds to BR0818 YP_005615657.1 identified by similarity to OMNI:NTL02ML1060; corresponds to BR0819 YP_005615658.1 corresponds to BR0820 YP_005615659.1 corresponds to BR0821 YP_005615660.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); corresponds to BR0822 YP_005615661.1 identified by match to protein family HMM PF02687; corresponds to BR0823 YP_005615662.1 identified by similarity to SP:P75957; match to protein family HMM PF00005; corresponds to BR0824 YP_005615663.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; corresponds to BR0825 YP_005615664.1 identified by similarity to OMNI:NTL02ML0034; corresponds to BR0826 YP_005615665.1 corresponds to BR0827 YP_005615666.1 identified by similarity to OMNI:NTL02ML1990; corresponds to BR0828 YP_005615667.1 corresponds to BR0829 YP_005615668.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; corresponds to BR0830 YP_005615669.1 identified by similarity to OMNI:NTL02ML0037; corresponds to BR0831 YP_005615670.1 identified by match to protein family HMM PF00459; corresponds to BR0832 YP_005615671.1 identified by match to protein family HMM PF00083; match to protein family HMM TIGR00710; corresponds to BR0833 YP_005615672.1 corresponds to BR0834 YP_005615673.1 identified by match to protein family HMM TIGR00365; corresponds to BR0835 YP_005615674.1 identified by match to protein family HMM PF01722; corresponds to BR0836 YP_005615675.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; corresponds to BR0837 YP_005615676.1 corresponds to BR0838 YP_005615677.1 identified by match to protein family HMM PF00043; corresponds to BR0839 YP_005615678.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; corresponds to BR0840 YP_005615679.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; corresponds to BR0841 YP_005615680.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; corresponds to BR0842 YP_005615681.1 identified by similarity to OMNI:NTL02ML0054; corresponds to BR0843 YP_005615682.1 identified by similarity to EGAD:11526; match to protein family HMM PF03328; corresponds to BR0844 YP_005615683.1 identified by similarity to GP:15074696; corresponds to BR0845 YP_005615684.1 corresponds to BR0846 YP_005615685.1 corresponds to BR0847 YP_005615686.1 identified by match to protein family HMM PF00903; corresponds to BR0848 YP_005615687.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; corresponds to BR0849 YP_005615688.1 identified by similarity to EGAD:101737; match to protein family HMM PF00834; match to protein family HMM TIGR01163; corresponds to BR0850 YP_005615689.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; corresponds to BR0851 YP_005615690.1 identified by match to protein family HMM PF00107; corresponds to BR0852 YP_005615691.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; corresponds to BR0853 YP_005615692.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; corresponds to BR0854 YP_005615693.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; corresponds to BR0855 YP_005615694.1 identified by similarity to OMNI:NTL02ML6731; match to protein family HMM PF05838; corresponds to BR0856 YP_005615695.1 identified by similarity to EGAD:30590; match to protein family HMM PF01263; corresponds to BR0857 YP_005615696.1 identified by similarity to SP:P37647; match to protein family HMM PF00294; corresponds to BR0858 YP_005615697.1 identified by similarity to GP:15141057; corresponds to BR0859 YP_005615698.1 identified by match to protein family HMM PF01979; corresponds to BR0860 YP_005615699.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; corresponds to BR0861 YP_005615700.1 identified by similarity to OMNI:CC1306; match to protein family HMM PF01207; match to protein family HMM TIGR00742; corresponds to BR0863 YP_005615701.1 identified by similarity to OMNI:NTL02ML0447; match to protein family HMM PF00077; corresponds to BR0864 YP_005615702.1 identified by similarity to OMNI:NTL02ML0446; corresponds to BR0865 YP_005615703.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; corresponds to BR0866 YP_005615704.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; corresponds to BR0867 YP_005615705.1 identified by match to protein family HMM PF01037; corresponds to BR0868 YP_005615706.1 identified by similarity to GP:15074814; corresponds to BR0869 YP_005615707.1 identified by match to protein family HMM PF00565; corresponds to BR0870 YP_005615708.1 corresponds to BR0871 YP_005615709.1 identified by similarity to EGAD:35423; corresponds to BR0872 YP_005615710.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; corresponds to BR0873 YP_005615711.1 identified by similarity to GP:15075908; match to protein family HMM PF04391; corresponds to BR0874 YP_005615712.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; corresponds to BR0875 YP_005615713.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; corresponds to BR0876 YP_005615714.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; corresponds to BR0877 YP_005615715.1 identified by similarity to OMNI:NTL02ML0862; corresponds to BR0878 YP_005615716.1 identified by match to protein family HMM PF00933; corresponds to BR0879 YP_005615717.1 identified by similarity to GP:14021929; match to protein family HMM PF02616; corresponds to BR0880 YP_005615718.1 identified by similarity to OMNI:NTL02ML0859; match to protein family HMM PF04079; match to protein family HMM TIGR00281; corresponds to BR0881 YP_005615719.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; corresponds to BR0882 YP_005615720.1 mediates the export of protein precursors bearing twin-arginine signal peptides; corresponds to BR0883 YP_005615721.1 identified by similarity to EGAD:10132; match to protein family HMM PF00902; match to protein family HMM TIGR00945; corresponds to BR0884 YP_005615722.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; corresponds to BR0885 YP_005615723.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; corresponds to BR0886 YP_005615724.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; corresponds to BR0887 YP_005615725.1 identified by match to protein family HMM PF01476; match to protein family HMM PF01551; corresponds to BR0888 YP_005615726.1 identified by similarity to OMNI:NTL02ML0849; match to protein family HMM PF05673; corresponds to BR0889 YP_005615727.1 identified by similarity to SP:Q9ZG87; match to protein family HMM PF02699; match to protein family HMM TIGR00739; corresponds to BR0890 YP_005615728.1 identified by similarity to GP:3220156; match to protein family HMM PF02355; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966; match to protein family HMM TIGR01129; corresponds to BR0891 YP_005615729.1 identified by similarity to GP:14021915; match to protein family HMM PF04635; corresponds to BR0892 YP_005615730.1 identified by similarity to OMNI:NTL02ML0845; corresponds to BR0893 YP_005615731.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; corresponds to BR0894 YP_005615732.1 identified by similarity to GP:15074478; corresponds to BR0895 YP_005615733.1 identified by similarity to OMNI:NTL02ML0840; corresponds to BR0896 YP_005615734.1 corresponds to BR0897 YP_005615735.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; corresponds to BR0898 YP_005615736.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; corresponds to BR0899 YP_005615737.1 identified by match to protein family HMM PF00583; corresponds to BR0900 YP_005615738.1 corresponds to BR0901 YP_005615739.1 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; corresponds to BR0902 YP_005615740.1 corresponds to BR0903 YP_005615741.1 identified by similarity to GP:15074249; corresponds to BR0904 YP_005615742.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; corresponds to BR0905 YP_005615743.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; corresponds to BR0906 YP_005615744.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; corresponds to BR0907 YP_005615745.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; corresponds to BR0908 YP_005615746.1 identified by match to protein family HMM PF01323; corresponds to BR0909 YP_005615747.1 identified by similarity to GP:14021229; match to protein family HMM PF01435; corresponds to BR0910 YP_005615748.1 identified by match to protein family HMM PF00155; corresponds to BR0911 YP_005615749.1 identified by match to protein family HMM TIGR00757; corresponds to BR0912 YP_005615750.1 corresponds to BR0913 YP_005615751.1 corresponds to BR0914 YP_005615752.1 identified by similarity to OMNI:NTL02ML0166; match to protein family HMM PF01520; corresponds to BR0915 YP_005615753.1 identified by similarity to SP:P02918; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; corresponds to BR0916 YP_005615754.1 corresponds to BR0918 YP_005615755.1 identified by similarity to EGAD:46813; corresponds to BR0919 YP_005615756.1 corresponds to BR0921 YP_005615757.1 corresponds to BR0922 YP_005615758.1 identified by similarity to GP:15074676; match to protein family HMM PF04305; corresponds to BR0923 YP_005615759.1 identified by similarity to EGAD:18740; match to protein family HMM PF00578; corresponds to BR0924 YP_005615760.1 identified by similarity to GP:14021072; corresponds to BR0925 YP_005615761.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); corresponds to BR0926 YP_005615762.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; corresponds to BR0927 YP_005615763.1 identified by similarity to GP:12024949; match to protein family HMM PF00893; corresponds to BR0928 YP_005615764.1 identified by similarity to GP:15074671; corresponds to BR0929 YP_005615765.1 identified by similarity to EGAD:14639; match to protein family HMM PF00266; corresponds to BR0930 YP_005615766.1 with SufCD activates cysteine desulfurase SufS; corresponds to BR0931 YP_005615767.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; corresponds to BR0932 YP_005615768.1 identified by similarity to OMNI:NTL02ML0017; match to protein family HMM PF01458; match to protein family HMM TIGR01981; corresponds to BR0933 YP_005615769.1 identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; corresponds to BR0934 YP_005615770.1 identified by similarity to GP:14021086; match to protein family HMM PF01883; corresponds to BR0935 YP_005615771.1 identified by match to protein family HMM PF00535; corresponds to BR0936 YP_005615772.1 catalyzes the phosphorylation of NAD to NADP; corresponds to BR0937 YP_005615773.1 identified by similarity to EGAD:20681; match to protein family HMM PF00270; match to protein family HMM PF00271; corresponds to BR0938 YP_005615774.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; corresponds to BR0939 YP_005615775.1 identified by similarity to OMNI:NTL02ML0072; corresponds to BR0940 YP_005615776.1 corresponds to BR0941 YP_005615777.1 identified by match to protein family HMM PF00403; corresponds to BR0942 YP_005615778.1 corresponds to BR0943 YP_005615779.1 identified by similarity to OMNI:NTL02ML0876; match to protein family HMM PF01135; corresponds to BR0944 YP_005615780.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01844; corresponds to BR0945 YP_005615781.1 identified by similarity to GP:14021943; corresponds to BR0946 YP_005615782.1 corresponds to BR0947 YP_005615783.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; corresponds to BR0948 YP_005615784.1 identified by match to protein family HMM PF03446; corresponds to BR0950 YP_005615785.1 identified by match to protein family HMM PF02798; corresponds to BR0951 YP_005615786.1 identified by similarity to EGAD:6543; match to protein family HMM PF00528; match to protein family HMM TIGR01726; corresponds to BR0952 YP_005615787.1 identified by similarity to EGAD:8421; match to protein family HMM PF00528; match to protein family HMM TIGR01726; corresponds to BR0953 YP_005615788.1 corresponds to BR0954 YP_005615789.1 identified by similarity to EGAD:37042; match to protein family HMM PF00497; corresponds to BR0955 YP_005615790.1 identified by similarity to SP:P32125; match to protein family HMM PF03205; match to protein family HMM TIGR00176; corresponds to BR0956 YP_005615791.1 identified by similarity to SP:P32173; corresponds to BR0957 YP_005615792.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; corresponds to BR0958 YP_005615793.1 identified by similarity to OMNI:NTL02ML0426; corresponds to BR0959 YP_005615794.1 identified by match to protein family HMM PF01360; corresponds to BR0960 YP_005615795.1 identified by similarity to SP:P00923; match to protein family HMM PF05681; match to protein family HMM PF05683; match to protein family HMM TIGR00722; match to protein family HMM TIGR00723; corresponds to BR0961 YP_005615796.1 identified by similarity to GP:15156702; corresponds to BR0962 YP_005615797.1 corresponds to BR0963 YP_005615798.1 identified by similarity to GP:15159178; match to protein family HMM PF04226; corresponds to BR0964 YP_005615799.1 corresponds to BR0965 YP_005615800.1 identified by match to protein family HMM PF00589; corresponds to BR0966 YP_005615801.1 corresponds to BR0967 YP_005615802.1 corresponds to BR0968 YP_005615803.1 corresponds to BR0969 YP_005615804.1 corresponds to BR0970 YP_005615805.1 identified by similarity to EGAD:151783; corresponds to BR0971 YP_005615806.1 identified by similarity to EGAD:176501; corresponds to BR0972 YP_005615807.1 corresponds to BR0973 YP_005615808.1 identified by similarity to GP:15073548; corresponds to BR0974 YP_005615809.1 identified by similarity to GP:15073547; corresponds to BR0975 YP_005615810.1 identified by similarity to EGAD:46813; corresponds to BR0977 YP_005615811.1 corresponds to BR0979 YP_005615812.1 corresponds to BR0980 YP_005615813.1 identified by similarity to GP:5616097; corresponds to BR0981 YP_005615814.1 identified by similarity to EGAD:103475; match to protein family HMM PF00534; corresponds to BR0982 YP_005615815.1 corresponds to BR0983 YP_005615816.1 identified by similarity to OMNI:PG0293; match to protein family HMM PF05838; corresponds to BR0984 YP_005615817.1 corresponds to BR0985 YP_005615818.1 corresponds to BR0986 YP_005615819.1 corresponds to BR0987 YP_005615820.1 corresponds to BR0988 YP_005615821.1 identified by similarity to EGAD:91898; match to protein family HMM PF03960; match to protein family HMM TIGR00014; corresponds to BR0989 YP_005615822.1 identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413; corresponds to BR0990 YP_005615823.1 identified by match to protein family HMM PF00768; corresponds to BR0991 YP_005615824.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); corresponds to BR0992 YP_005615825.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; corresponds to BR0993 YP_005615826.1 corresponds to BR0994 YP_005615827.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; corresponds to BR0995 YP_005615828.1 identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; corresponds to BR0996 YP_005615829.1 identified by similarity to GP:15074532; match to protein family HMM PF00753; corresponds to BR0997 YP_005615830.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; corresponds to BR0998 YP_005615831.1 corresponds to BR0999 YP_005615832.1 identified by similarity to EGAD:7861; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; corresponds to BR1000 YP_005615833.1 identified by match to protein family HMM PF00892; corresponds to BR1001 YP_005615834.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; corresponds to BR1002 YP_005615835.1 identified by similarity to GP:15156553; corresponds to BR1003 YP_005615836.1 identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; corresponds to BR1004 YP_005615837.1 identified by similarity to EGAD:35417; match to protein family HMM PF00543; corresponds to BR1005 YP_005615838.1 identified by similarity to OMNI:CC1965; match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; corresponds to BR1006 YP_005615839.1 corresponds to BR1007 YP_005615840.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; corresponds to BR1008 YP_005615841.1 corresponds to BR1009 YP_005615842.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; corresponds to BR1010 YP_005615843.1 identified by similarity to OMNI:NTL02ML0413; corresponds to BR1011 YP_005615844.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; corresponds to BR1012 YP_005615845.1 identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358; corresponds to BR1013 YP_005615846.1 identified by similarity to SP:P00556; match to protein family HMM PF01219; corresponds to BR1014 YP_005615847.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; corresponds to BR1015 YP_005615848.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; corresponds to BR1016 YP_005615849.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; corresponds to BR1017 YP_005615850.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746; corresponds to BR1018 YP_005615851.1 identified by match to protein family HMM PF01740; match to protein family HMM PF02405; corresponds to BR1019 YP_005615852.1 identified by match to protein family HMM PF00005; corresponds to BR1020 YP_005615853.1 identified by match to protein family HMM PF02470; corresponds to BR1021 YP_005615854.1 identified by similarity to GP:15156733; match to protein family HMM PF03886; corresponds to BR1022 YP_005615855.1 corresponds to BR1023 YP_005615856.1 identified by similarity to GP:15074750; match to protein family HMM TIGR01369; match to protein family HMM TIGR01612; corresponds to BR1024 YP_005615857.1 corresponds to BR1025 YP_005615858.1 identified by similarity to EGAD:5699; match to protein family HMM PF00111; corresponds to BR1026 YP_005615859.1 identified by similarity to OMNI:NTL02ML0625; corresponds to BR1028 YP_005615860.1 identified by similarity to SP:P28822; match to protein family HMM PF00809; match to protein family HMM TIGR01496; corresponds to BR1029 YP_005615861.1 identified by similarity to EGAD:14090; match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; corresponds to BR1030 YP_005615862.1 identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; corresponds to BR1031 YP_005615863.1 identified by similarity to GP:14021684; corresponds to BR1032 YP_005615864.1 identified by similarity to OMNI:NTL02ML0615; match to protein family HMM PF05128; match to protein family HMM TIGR01620; corresponds to BR1033 YP_005615865.1 identified by similarity to GP:14021682; match to protein family HMM PF04317; corresponds to BR1034 YP_005615866.1 identified by similarity to GP:14021681; corresponds to BR1035 YP_005615867.1 identified by similarity to EGAD:19456; match to protein family HMM PF01258; corresponds to BR1036 YP_005615868.1 corresponds to BR1037 YP_005615869.1 corresponds to BR1038 YP_005615870.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; corresponds to BR1039 YP_005615871.1 identified by similarity to GP:15140178; match to protein family HMM PF03486; corresponds to BR1040 YP_005615872.1 identified by match to protein family HMM PF00144; corresponds to BR1041 YP_005615873.1 Catalyzes the rate-limiting step in dNTP synthesis; corresponds to BR1043 YP_005615874.1 corresponds to BR1044 YP_005615875.1 identified by match to protein family HMM PF00293; corresponds to BR1045 YP_005615876.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; corresponds to BR1046 YP_005615877.1 identified by similarity to OMNI:NTL02ML0109; match to protein family HMM PF00582; corresponds to BR1047 YP_005615878.1 identified by match to protein family HMM PF00994; corresponds to BR1048 YP_005615879.1 stationary phase protein that binds TrpR repressor; corresponds to BR1049 YP_005615880.1 corresponds to BR1050 YP_005615881.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; corresponds to BR1051 YP_005615882.1 identified by similarity to GP:14021336; match to protein family HMM PF00270; match to protein family HMM PF00271; corresponds to BR1052 YP_005615883.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; corresponds to BR1053 YP_005615884.1 identified by similarity to GP:15156264; corresponds to BR1054 YP_005615885.1 identified by similarity to GP:15074554; match to protein family HMM PF00581; corresponds to BR1055 YP_005615886.1 identified by match to protein family HMM PF00583; corresponds to BR1056 YP_005615887.1 identified by similarity to OMNI:NTL02ML3729; match to protein family HMM PF00990; match to protein family HMM TIGR00254; corresponds to BR1057 YP_005615888.1 identified by match to protein family HMM PF02550; corresponds to BR1058 YP_005615889.1 identified by match to protein family HMM PF00083; match to protein family HMM TIGR00711; corresponds to BR1059 YP_005615890.1 identified by match to protein family HMM PF00529; corresponds to BR1060 YP_005615891.1 identified by similarity to SP:P42327; match to protein family HMM PF00107; corresponds to BR1061 YP_005615892.1 identified by similarity to OMNI:NTL01XF00221; match to protein family HMM PF00557; corresponds to BR1062 YP_005615893.1 identified by similarity to GP:15157001; match to protein family HMM PF00515; corresponds to BR1063 YP_005615894.1 identified by similarity to GP:2708271; match to protein family HMM PF01758; corresponds to BR1064 YP_005615895.1 corresponds to BR1065 YP_005615896.1 identified by similarity to EGAD:45971; match to protein family HMM PF01370; match to protein family HMM TIGR01179; corresponds to BR1066 YP_005615897.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; corresponds to BR1067 YP_005615898.1 identified by similarity to OMNI:NTL02ML0717; corresponds to BR1068 YP_005615899.1 identified by match to protein family HMM PF00881; corresponds to BR1069 YP_005615900.1 identified by similarity to OMNI:NTL02ML0719; corresponds to BR1070 YP_005615901.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); corresponds to BR1071 YP_005615902.1 identified by match to protein family HMM PF00768; corresponds to BR1072 YP_005615903.1 identified by similarity to OMNI:NTL02ML0724; match to protein family HMM PF01809; match to protein family HMM TIGR00278; corresponds to BR1073 YP_005615904.1 identified by match to protein family HMM PF01592; corresponds to BR1074 YP_005615905.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; corresponds to BR1075 YP_005615906.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; corresponds to BR1076 YP_005615907.1 identified by similarity to OMNI:NTL02ML0729; match to protein family HMM PF01734; corresponds to BR1077 YP_005615908.1 identified by match to protein family HMM PF00589; corresponds to BR1078 YP_005615909.1 corresponds to BR1079 YP_005615910.1 corresponds to BR1080 YP_005615911.1 corresponds to BR1081 YP_005615912.1 identified by match to protein family HMM PF00239; corresponds to BR1082 YP_005615913.1 identified by match to protein family HMM PF02498; corresponds to BR1083 YP_005615914.1 identified by match to protein family HMM PF02515; corresponds to BR1084 YP_005615915.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; corresponds to BR1085 YP_005615916.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; corresponds to BR1086 YP_005615917.1 identified by match to protein family HMM PF00296; corresponds to BR1087 YP_005615918.1 identified by match to protein family HMM PF00873; corresponds to BR1088 YP_005615919.1 identified by similarity to OMNI:VC0165; match to protein family HMM TIGR01730; corresponds to BR1089 YP_005615920.1 identified by match to protein family HMM PF00440; corresponds to BR1090 YP_005615921.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); corresponds to BR1091 YP_005615922.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; corresponds to BR1092 YP_005615923.1 identified by similarity to OMNI:NTL02ML0580; match to protein family HMM PF00160; corresponds to BR1093 YP_005615924.1 identified by similarity to OMNI:CC1584; match to protein family HMM PF00160; corresponds to BR1094 YP_005615925.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; corresponds to BR1095 YP_005615926.1 corresponds to BR1096 YP_005615927.1 negatively supercoils closed circular double-stranded DNA; corresponds to BR1097 YP_005615928.1 identified by similarity to OMNI:NTL02ML0590; match to protein family HMM PF01914; match to protein family HMM TIGR00427; corresponds to BR1098 YP_005615929.1 corresponds to BR1099 YP_005615930.1 identified by match to protein family HMM PF00392; corresponds to BR1100 YP_005615931.1 corresponds to BR1101 YP_005615932.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; corresponds to BR1102 YP_005615933.1 corresponds to BR1103 YP_005615934.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; corresponds to BR1104 YP_005615935.1 identified by similarity to EGAD:8582; match to protein family HMM PF00216; corresponds to BR1105 YP_005615936.1 identified by similarity to EGAD:18728; match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM TIGR00763; corresponds to BR1106 YP_005615937.1 corresponds to BR1107 YP_005615938.1 binds and unfolds substrates as part of the ClpXP protease; corresponds to BR1108 YP_005615939.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; corresponds to BR1109 YP_005615940.1 corresponds to BR1110 YP_005615941.1 Stimulates the elongation of poly(A) tails; corresponds to BR1111 YP_005615942.1 corresponds to BR1112 YP_005615943.1 corresponds to BR1113 YP_005615944.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; corresponds to BR1114 YP_005615945.1 identified by similarity to EGAD:5624; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; corresponds to BR1115 YP_005615946.1 identified by similarity to EGAD:10502; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM TIGR00229; corresponds to BR1116 YP_005615947.1 identified by similarity to EGAD:19665; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; match to protein family HMM TIGR01818; corresponds to BR1117 YP_005615948.1 identified by similarity to EGAD:22187; match to protein family HMM PF00512; match to protein family HMM PF02518; corresponds to BR1118 YP_005615949.1 identified by similarity to EGAD:30550; match to protein family HMM PF01207; match to protein family HMM TIGR00737; corresponds to BR1119 YP_005615950.1 bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; corresponds to BR1120 YP_005615951.1 identified by similarity to GP:15074388; match to protein family HMM PF02464; match to protein family HMM TIGR00199; corresponds to BR1121 YP_005615952.1 identified by match to protein family HMM PF00106; corresponds to BR1122 YP_005615953.1 identified by similarity to OMNI:NTL02ML0302; match to protein family HMM PF03654; corresponds to BR1123 YP_005615954.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; corresponds to BR1124 YP_005615955.1 corresponds to BR1125 YP_005615956.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; corresponds to BR1126 YP_005615957.1 identified by similarity to SP:Q9R9N3; match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM TIGR01349; corresponds to BR1127 YP_005615958.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; corresponds to BR1128 YP_005615959.1 identified by similarity to SP:Q9R9N5; match to protein family HMM PF00676; corresponds to BR1129 YP_005615960.1 identified by similarity to OMNI:NTL02ML0293; match to protein family HMM PF04977; corresponds to BR1130 YP_005615961.1 identified by similarity to OMNI:CC1925; corresponds to BR1131 YP_005615962.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; corresponds to BR1132 YP_005615963.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; corresponds to BR1133 YP_005615964.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; corresponds to BR1134 YP_005615965.1 corresponds to BR1135 YP_005615966.1 identified by similarity to GP:15157507; match to protein family HMM PF03734; corresponds to BR1136 YP_005615967.1 identified by match to protein family HMM PF03840; corresponds to BR1137 YP_005615968.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; corresponds to BR1138 YP_005615969.1 corresponds to BR1139 YP_005615970.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; corresponds to BR1140 YP_005615971.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; corresponds to BR1141 YP_005615972.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; corresponds to BR1142 YP_005615973.1 identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; corresponds to BR1143 YP_005615974.1 Represses a number of genes involved in the response to DNA damage; corresponds to BR1144 YP_005615975.1 identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; corresponds to BR1145 YP_005615976.1 corresponds to BR1146 YP_005615977.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; corresponds to BR1147 YP_005615978.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; corresponds to BR1148 YP_005615979.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; corresponds to BR1149 YP_005615980.1 identified by similarity to GP:15074439; corresponds to BR1150 YP_005615981.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; corresponds to BR1151 YP_005615982.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; corresponds to BR1152 YP_005615983.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; corresponds to BR1153 YP_005615984.1 identified by match to protein family HMM PF01103; corresponds to BR1154 YP_005615985.1 corresponds to BR1155 YP_005615986.1 identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054; corresponds to BR1156 YP_005615987.1 identified by similarity to EGAD:108469; match to protein family HMM PF01148; corresponds to BR1157 YP_005615988.1 identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; corresponds to BR1158 YP_005615989.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; corresponds to BR1159 YP_005615990.1 Catalyzes the phosphorylation of UMP to UDP; corresponds to BR1160 YP_005615991.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; corresponds to BR1161 YP_005615992.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; corresponds to BR1162 YP_005615993.1 identified by similarity to GP:9107039; corresponds to BR1163 YP_005615994.1 identified by similarity to OMNI:NTL02ML0524; corresponds to BR1164 YP_005615995.1 identified by similarity to OMNI:NTL02ML0525; match to protein family HMM PF01042; corresponds to BR1165 YP_005615996.1 identified by similarity to EGAD:9938; match to protein family HMM PF03009; corresponds to BR1166 YP_005615997.1 identified by similarity to OMNI:NTL02ML0527; match to protein family HMM PF04339; corresponds to BR1167 YP_005615998.1 identified by match to protein family HMM PF01230; corresponds to BR1168 YP_005615999.1 identified by similarity to EGAD:17776; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM TIGR01967; corresponds to BR1169 YP_005616000.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; corresponds to BR1170 YP_005616001.1 corresponds to BR1171 YP_005616002.1 identified by match to protein family HMM PF00768; corresponds to BR1172 YP_005616003.1 identified by similarity to GP:15074343; corresponds to BR1173 YP_005616004.1 identified by similarity to OMNI:NTL02ML0534; corresponds to BR1174 YP_005616005.1 identified by similarity to SP:P42630; match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; corresponds to BR1175 YP_005616006.1 corresponds to BR1176 YP_005616007.1 identified by similarity to OMNI:NTL02ML0537; match to protein family HMM PF02698; corresponds to BR1177 YP_005616008.1 identified by similarity to OMNI:NTL02ML1038; corresponds to BR1178 YP_005616009.1 identified by match to protein family HMM PF00376; corresponds to BR1179 YP_005616010.1 corresponds to BR1180 YP_005616011.1 identified by similarity to GP:15141218; corresponds to BR1181 YP_005616012.1 identified by similarity to GP:15156035; corresponds to BR1182 YP_005616013.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; corresponds to BR1183 YP_005616014.1 corresponds to BR1184 YP_005616015.1 corresponds to BR1185 YP_005616016.1 identified by similarity to OMNI:CC2122; corresponds to BR1186 YP_005616017.1 identified by similarity to GP:15159740; match to protein family HMM PF01381; corresponds to BR1187 YP_005616018.1 identified by similarity to EGAD:2033; match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; match to protein family HMM PF02786; corresponds to BR1189 YP_005616019.1 MDM; functions in conversion of succinate to propionate; corresponds to BR1190 YP_005616020.1 identified by similarity to GP:15140764; corresponds to BR1191 YP_005616021.1 identified by similarity to OMNI:NTL01BH2941; match to protein family HMM TIGR02123; corresponds to BR1192 YP_005616022.1 corresponds to BR1193 YP_005616023.1 identified by similarity to EGAD:7185; match to protein family HMM TIGR02122; corresponds to BR1194 YP_005616024.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; corresponds to BR1195 YP_005616025.1 identified by match to protein family HMM PF00588; match to protein family HMM TIGR00050; corresponds to BR1196 YP_005616026.1 identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382; corresponds to BR1197 YP_005616027.1 identified by similarity to OMNI:NTL03PA04336; corresponds to BR1198 YP_005616028.1 Converts isocitrate to alpha ketoglutarate; corresponds to BR1199 YP_005616029.1 identified by similarity to SP:P00634; match to protein family HMM PF00245; corresponds to BR1200 YP_005616030.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; corresponds to BR1201 YP_005616031.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; corresponds to BR1202 YP_005616032.1 corresponds to BR1203 YP_005616033.1 identified by match to protein family HMM PF00691; corresponds to BR1204 YP_005616034.1 identified by similarity to GP:15075335; corresponds to BR1205 YP_005616035.1 identified by match to protein family HMM PF00004; corresponds to BR1206 YP_005616036.1 identified by similarity to EGAD:18959; match to protein family HMM PF00089; match to protein family HMM PF00595; corresponds to BR1207 YP_005616037.1 is a component of the macrolide binding site in the peptidyl transferase center; corresponds to BR1208 YP_005616038.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; corresponds to BR1209 YP_005616039.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; corresponds to BR1210 YP_005616040.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; corresponds to BR1211 YP_005616041.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; corresponds to BR1212 YP_005616042.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; corresponds to BR1213 YP_005616043.1 late assembly protein; corresponds to BR1214 YP_005616044.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; corresponds to BR1215 YP_005616045.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; corresponds to BR1216 YP_005616046.1 binds 5S rRNA along with protein L5 and L25; corresponds to BR1217 YP_005616047.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; corresponds to BR1218 YP_005616048.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; corresponds to BR1219 YP_005616049.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; corresponds to BR1220 YP_005616050.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; corresponds to BR1221 YP_005616051.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; corresponds to BR1222 YP_005616052.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; corresponds to BR1223 YP_005616053.1 primary binding protein; helps mediate assembly; involved in translation fidelity; corresponds to BR1224 YP_005616054.1 one of the stabilizing components for the large ribosomal subunit; corresponds to BR1225 YP_005616055.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; corresponds to BR1226 YP_005616056.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; corresponds to BR1227 YP_005616057.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; corresponds to BR1228 YP_005616058.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; corresponds to BR1229 YP_005616059.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; corresponds to BR1230 YP_005616060.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; corresponds to BR1231 YP_005616061.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; corresponds to BR1232 YP_005616062.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; corresponds to BR1233 YP_005616063.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; corresponds to BR1234 YP_005616064.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; corresponds to BR1235 YP_005616065.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; corresponds to BR1236 YP_005616066.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; corresponds to BR1237 YP_005616067.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; corresponds to BR1238 YP_005616068.1 corresponds to BR1239 YP_005616069.1 corresponds to BR1240 YP_005616070.1 identified by similarity to GP:15074283; corresponds to BR1241 YP_005616071.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; corresponds to BR1242 YP_005616072.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; corresponds to BR1243 YP_005616073.1 corresponds to BR1244 YP_005616074.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; corresponds to BR1245 YP_005616075.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; corresponds to BR1246 YP_005616076.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; corresponds to BR1247 YP_005616077.1 binds directly to 23S ribosomal RNA; corresponds to BR1248 YP_005616078.1 Modulates Rho-dependent transcription termination; corresponds to BR1249 YP_005616079.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; corresponds to BR1250 YP_005616080.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; corresponds to BR1251 YP_005616081.1 corresponds to BR1252 YP_005616082.1 corresponds to BR1253 YP_005616083.1 identified by match to protein family HMM PF00588; match to protein family HMM TIGR00186; corresponds to BR1254 YP_005616084.1 identified by match to protein family HMM PF01694; corresponds to BR1256 YP_005616085.1 corresponds to BR1257 YP_005616086.1 identified by similarity to OMNI:NTL02ML0144; corresponds to BR1258 YP_005616087.1 identified by similarity to OMNI:NTL02ML0142; corresponds to BR1259 YP_005616088.1 identified by similarity to OMNI:NTL02ML0140; match to protein family HMM PF00132; corresponds to BR1260 YP_005616089.1 identified by similarity to GP:15074417; corresponds to BR1261 YP_005616090.1 identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172; corresponds to BR1262 YP_005616091.1 corresponds to BR1263 YP_005616092.1 identified by match to protein family HMM PF00561; corresponds to BR1264 YP_005616093.1 identified by similarity to GP:14021198; match to protein family HMM PF02643; corresponds to BR1265 YP_005616094.1 identified by match to protein family HMM PF00313; corresponds to BR1266 YP_005616095.1 corresponds to BR1267 YP_005616096.1 identified by match to protein family HMM PF00903; corresponds to BR1268 YP_005616097.1 identified by similarity to OMNI:NT01MC4682; corresponds to BR1269 YP_005616098.1 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; corresponds to BR1270 YP_005616099.1 identified by similarity to EGAD:14437; match to protein family HMM PF01820; match to protein family HMM TIGR01205; corresponds to BR1271 YP_005616100.1 corresponds to BR1272 YP_005616101.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; corresponds to BR1273 YP_005616102.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; corresponds to BR1274 YP_005616103.1 identified by match to protein family HMM PF00155; corresponds to BR1275 YP_005616104.1 corresponds to BR1276 YP_005616105.1 identified by similarity to GP:14021808; corresponds to BR1277 YP_005616106.1 identified by similarity to OMNI:NTL02ML0128; corresponds to BR1278 YP_005616107.1 corresponds to BR1279 YP_005616108.1 corresponds to BR1280 YP_005616109.1 Regulatory factor involved in maltose metabolism; corresponds to BR1281 YP_005616110.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; corresponds to BR1282 YP_005616111.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; corresponds to BR1283 YP_005616112.1 identified by similarity to GP:14018349; corresponds to BR1284 YP_005616113.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR01468; corresponds to BR1285 YP_005616114.1 identified by match to protein family HMM PF01077; match to protein family HMM PF03460; corresponds to BR1286 YP_005616115.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; corresponds to BR1287 YP_005616116.1 catalyzes the formation of precorrin-3 from precorrin-2; corresponds to BR1288 YP_005616117.1 identified by match to protein family HMM PF00590; match to protein family HMM PF01890; match to protein family HMM TIGR01466; corresponds to BR1289 YP_005616118.1 corresponds to BR1290 YP_005616119.1 corresponds to BR1291 YP_005616120.1 identified by match to protein family HMM PF01613; corresponds to BR1292 YP_005616121.1 identified by similarity to SP:P02917; match to protein family HMM PF01094; corresponds to BR1293 YP_005616122.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; corresponds to BR1294 YP_005616123.1 identified by similarity to SP:P21633; match to protein family HMM PF00155; corresponds to BR1295 YP_005616124.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; corresponds to BR1296 YP_005616125.1 identified by similarity to SP:P21631; match to protein family HMM PF00590; match to protein family HMM TIGR01469; corresponds to BR1297 YP_005616126.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; corresponds to BR1298 YP_005616127.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; corresponds to BR1299 YP_005616128.1 identified by similarity to SP:P21922; match to protein family HMM PF00590; match to protein family HMM TIGR01465; corresponds to BR1300 YP_005616129.1 corresponds to BR1301 YP_005616130.1 identified by similarity to OMNI:NTL02ML0945; corresponds to BR1302 YP_005616131.1 identified by similarity to OMNI:NTL02ML0946; match to protein family HMM PF01925; corresponds to BR1303 YP_005616132.1 identified by match to protein family HMM PF00892; corresponds to BR1304 YP_005616133.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; corresponds to BR1305 YP_005616134.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; corresponds to BR1306 YP_005616135.1 identified by match to protein family HMM PF02492; corresponds to BR1307 YP_005616136.1 catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; corresponds to BR1308 YP_005616137.1 identified by similarity to OMNI:NTL02ML1033; corresponds to BR1309 YP_005616138.1 identified by similarity to GP:14022104; corresponds to BR1310 YP_005616139.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; corresponds to BR1311 YP_005616140.1 corresponds to BR1312 YP_005616141.1 identified by match to protein family HMM PF03446; match to protein family HMM TIGR01692; corresponds to BR1314 YP_005616142.1 corresponds to BR1315 YP_005616143.1 identified by similarity to OMNI:CC3473; corresponds to BR1316 YP_005616144.1 corresponds to BR1317 YP_005616145.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965; corresponds to BR1319 YP_005616146.1 identified by similarity to OMNI:NTL02ML1001; corresponds to BR1321 YP_005616147.1 corresponds to BR1323 YP_005616148.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; corresponds to BR1324 YP_005616149.1 identified by match to protein family HMM PF00999; match to protein family HMM PF02254; match to protein family HMM TIGR00932; corresponds to BR1325 YP_005616150.1 corresponds to BR1326 YP_005616151.1 identified by similarity to GP:15074696; corresponds to BR1327 YP_005616152.1 identified by similarity to SP:P16702; match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140; corresponds to BR1328 YP_005616153.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02139; corresponds to BR1329 YP_005616154.1 identified by similarity to SP:P06997; match to protein family HMM PF01547; match to protein family HMM TIGR00971; corresponds to BR1330 YP_005616155.1 corresponds to BR1331 YP_005616156.1 identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741; corresponds to BR1332 YP_005616157.1 identified by match to protein family HMM PF00597; corresponds to BR1333 YP_005616159.1 identified by similarity to EGAD:154080; match to protein family HMM PF00036; corresponds to BR1336 YP_005616160.1 identified by match to protein family HMM PF05025; corresponds to BR1337 YP_005616161.1 identified by similarity to OMNI:NTL02ML3842; match to protein family HMM PF00106; corresponds to BR1338 YP_005616162.1 identified by match to protein family HMM PF00005; corresponds to BR1339 YP_005616163.1 identified by similarity to GP:6273663; match to protein family HMM PF02653; corresponds to BR1340 YP_005616164.1 corresponds to BR1341 YP_005616165.1 identified by similarity to GP:6273662; match to protein family HMM PF00532; corresponds to BR1342 YP_005616166.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; corresponds to BR1343 YP_005616167.1 identified by similarity to SP:P15031; match to protein family HMM PF00005; corresponds to BR1344 YP_005616168.1 identified by match to protein family HMM PF01032; corresponds to BR1345 YP_005616169.1 identified by similarity to PIR:S54437; match to protein family HMM PF01497; corresponds to BR1346 YP_005616170.1 identified by similarity to SP:P06129; match to protein family HMM PF00593; corresponds to BR1347 YP_005616171.1 corresponds to BR1348 YP_005616172.1 corresponds to BR1349 YP_005616173.1 identified by match to protein family HMM PF00005; corresponds to BR1350 YP_005616174.1 identified by match to protein family HMM PF00529; corresponds to BR1351 YP_005616175.1 corresponds to BR1352 YP_005616176.1 corresponds to BR1353 YP_005616177.1 identified by similarity to OMNI:NTL02EC1981; match to protein family HMM PF02638; corresponds to BR1354 YP_005616178.1 corresponds to BR1355 YP_005616179.1 UreA, with UreB and UreC, catalyzes the hydrolysis of urea to ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; corresponds to BR1356 YP_005616180.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) does not seem to be involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo; corresponds to BR1357 YP_005616181.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; corresponds to BR1358 YP_005616182.1 identified by similarity to SP:Q9ZFR8; match to protein family HMM PF02814; match to protein family HMM PF05194; corresponds to BR1359 YP_005616183.1 identified by similarity to EGAD:8726; match to protein family HMM PF01730; corresponds to BR1360 YP_005616184.1 identified by similarity to SP:P42871; match to protein family HMM PF01495; match to protein family HMM TIGR00101; corresponds to BR1361 YP_005616185.1 identified by similarity to EGAD:20614; match to protein family HMM PF01774; corresponds to BR1362 YP_005616186.1 identified by similarity to GP:1905970; match to protein family HMM PF03253; corresponds to BR1363 YP_005616187.1 corresponds to BR1364 YP_005616188.1 catalyzes the ATP-dependent transport of cobalt; corresponds to BR1365 YP_005616189.1 identified by similarity to EGAD:28613; corresponds to BR1366 YP_005616190.1 identified by similarity to GP:6138845; match to protein family HMM PF02361; corresponds to BR1367 YP_005616191.1 identified by match to protein family HMM PF00005; corresponds to BR1368 YP_005616192.1 identified by match to protein family HMM PF02537; match to protein family HMM PF03625; corresponds to BR1369 YP_005616193.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; corresponds to BR1370 YP_005616194.1 corresponds to BR1371 YP_005616195.1 identified by similarity to EGAD:6639 YP_005616196.1 identified by similarity to EGAD:38480; match to protein family HMM PF02567; match to protein family HMM TIGR00654; corresponds to BR1374 YP_005616197.1 identified by similarity to OMNI:NTL02ML1103; corresponds to BR1375 YP_005616198.1 identified by similarity to GP:3236220; corresponds to BR1377 YP_005616199.1 identified by match to protein family HMM PF00155; corresponds to BR1378 YP_005616200.1 corresponds to BR1379 YP_005616201.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; corresponds to BR1380 YP_005616202.1 identified by match to protein family HMM PF00440; corresponds to BR1381 YP_005616203.1 corresponds to BR1382 YP_005616204.1 identified by similarity to SP:P30016; match to protein family HMM PF02705; corresponds to BR1383 YP_005616205.1 corresponds to BR1384 YP_005616206.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); corresponds to BR1385 YP_005616207.1 corresponds to BR1386 YP_005616208.1 identified by similarity to OMNI:NTL02ML1120; corresponds to BR1387 YP_005616209.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; corresponds to BR1388 YP_005616210.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; corresponds to BR1389 YP_005616211.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; corresponds to BR1390 YP_005616212.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; corresponds to BR1391 YP_005616213.1 identified by similarity to OMNI:CC1477; match to protein family HMM PF03486; match to protein family HMM TIGR00275; corresponds to BR1392 YP_005616214.1 corresponds to BR1393 YP_005616215.1 identified by similarity to OMNI:CC2758; match to protein family HMM PF00089; match to protein family HMM PF00595; corresponds to BR1394 YP_005616216.1 identified by similarity to GP:14022214; corresponds to BR1395 YP_005616217.1 identified by similarity to EGAD:9363; match to protein family HMM PF01145; match to protein family HMM TIGR01932; corresponds to BR1396 YP_005616218.1 identified by similarity to SP:Q9KV09; match to protein family HMM PF01145; match to protein family HMM TIGR01933; corresponds to BR1397 YP_005616219.1 identified by match to protein family HMM PF00186; corresponds to BR1398 YP_005616220.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; corresponds to BR1399 YP_005616221.1 identified by similarity to OMNI:NTL02ML1156; corresponds to BR1400 YP_005616222.1 identified by match to protein family HMM PF00083; match to protein family HMM TIGR00710; corresponds to BR1401 YP_005616223.1 corresponds to BR1402 YP_005616224.1 identified by match to protein family HMM PF00440; corresponds to BR1403 YP_005616225.1 identified by similarity to OMNI:NTL02ML1160; corresponds to BR1404 YP_005616226.1 corresponds to BR1405 YP_005616227.1 identified by similarity to OMNI:NTL02ML1161; corresponds to BR1406 YP_005616228.1 identified by similarity to OMNI:NTL02ML1162; corresponds to BR1407 YP_005616229.1 identified by similarity to OMNI:NTL02ML1167; match to protein family HMM PF05170; corresponds to BR1408 YP_005616230.1 corresponds to BR1409 YP_005616231.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; corresponds to BR1410 YP_005616232.1 identified by similarity to OMNI:NTL02ML3966; corresponds to BR1411 YP_005616233.1 identified by similarity to OMNI:NTL01XF00279; corresponds to BR1412 YP_005616234.1 identified by similarity to EGAD:14237; match to protein family HMM PF00580; corresponds to BR1413 YP_005616235.1 identified by similarity to GP:14022272; corresponds to BR1414 YP_005616236.1 identified by similarity to OMNI:NTL02ML1201; match to protein family HMM PF00132; corresponds to BR1415 YP_005616237.1 identified by match to protein family HMM PF02630; corresponds to BR1416 YP_005616238.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; corresponds to BR1417 YP_005616239.1 identified by similarity to OMNI:NTL02ML1206; match to protein family HMM PF00557; corresponds to BR1418 YP_005616240.1 identified by similarity to GP:14022279; corresponds to BR1419 YP_005616241.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; corresponds to BR1420 YP_005616242.1 identified by similarity to SP:P05824; match to protein family HMM TIGR00634; corresponds to BR1421 YP_005616243.1 identified by similarity to EGAD:40678; match to protein family HMM PF03696; corresponds to BR1422 YP_005616244.1 corresponds to BR1423 YP_005616245.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; corresponds to BR1424 YP_005616246.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; corresponds to BR1425 YP_005616247.1 identified by similarity to SP:O30994; match to protein family HMM PF02491; match to protein family HMM TIGR01174; corresponds to BR1426 YP_005616248.1 identified by similarity to SP:O30993; match to protein family HMM PF03799; corresponds to BR1427 YP_005616249.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; corresponds to BR1428 YP_005616250.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; corresponds to BR1429 YP_005616251.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; corresponds to BR1430 YP_005616252.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; corresponds to BR1431 YP_005616253.1 identified by similarity to EGAD:20048; match to protein family HMM PF01098; corresponds to BR1432 YP_005616254.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; corresponds to BR1433 YP_005616255.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; corresponds to BR1434 YP_005616256.1 identified by similarity to EGAD:15807; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01143; corresponds to BR1435 YP_005616257.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; corresponds to BR1436 YP_005616258.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; corresponds to BR1437 YP_005616259.1 identified by similarity to GP:14022298; corresponds to BR1438 YP_005616260.1 identified by similarity to GP:15075206; match to protein family HMM PF01795; match to protein family HMM TIGR00006; corresponds to BR1439 YP_005616261.1 corresponds to BR1440 YP_005616262.1 identified by similarity to GP:17740175; match to protein family HMM PF01566; match to protein family HMM TIGR01197; corresponds to BR1441 YP_005616263.1 corresponds to BR1442 YP_005616264.1 identified by match to protein family HMM PF01464; corresponds to BR1443 YP_005616265.1 identified by match to protein family HMM PF01471; match to protein family HMM PF01510; corresponds to BR1444 YP_005616266.1 identified by match to protein family HMM PF00226; corresponds to BR1445 YP_005616267.1 corresponds to BR1446 YP_005616268.1 identified by match to protein family HMM PF01183; corresponds to BR1447 YP_005616269.1 identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; corresponds to BR1450 YP_005616270.1 identified by match to protein family HMM PF01022; match to protein family HMM PF01209; corresponds to BR1451 YP_005616271.1 identified by similarity to OMNI:NTL02ML1250; corresponds to BR1452 YP_005616272.1 identified by match to protein family HMM PF00083; match to protein family HMM TIGR00883; corresponds to BR1453 YP_005616273.1 corresponds to BR1454 YP_005616274.1 identified by similarity to SP:P76145; corresponds to BR1455 YP_005616275.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; corresponds to BR1456 YP_005616276.1 corresponds to BR1457 YP_005616277.1 identified by similarity to OMNI:NTL02ML1266; corresponds to BR1458 YP_005616278.1 corresponds to BR1459 YP_005616279.1 identified by similarity to OMNI:NTL01PM1376; corresponds to BR1460 YP_005616280.1 identified by match to protein family HMM PF00355; corresponds to BR1461 YP_005616281.1 identified by similarity to EGAD:91746; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; corresponds to BR1462 YP_005616282.1 identified by similarity to SP:P16680; match to protein family HMM PF03831; corresponds to BR1463 YP_005616283.1 identified by similarity to SP:P21369; match to protein family HMM PF00857; corresponds to BR1464 YP_005616284.1 identified by match to protein family HMM PF04332; corresponds to BR1465 YP_005616285.1 corresponds to BR1466 YP_005616286.1 corresponds to BR1467 YP_005616287.1 identified by match to protein family HMM PF02275; corresponds to BR1468 YP_005616288.1 identified by similarity to GP:14523684; corresponds to BR1469 YP_005616289.1 corresponds to BR1470 YP_005616290.1 corresponds to BR1471 YP_005616291.1 corresponds to BR1472 YP_005616292.1 corresponds to BR1473 YP_005616293.1 identified by match to protein family HMM PF00589; corresponds to BR1474 YP_005616294.1 identified by similarity to EGAD:40996; match to protein family HMM PF04402; corresponds to BR1475 YP_005616295.1 corresponds to BR1476 YP_005616296.1 identified by similarity to OMNI:NTL02ML1869; match to protein family HMM PF05779; corresponds to BR1477 YP_005616297.1 identified by similarity to OMNI:NTL02ML1900; corresponds to BR1478 YP_005616298.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; corresponds to BR1479 YP_005616299.1 synthesizes RNA primers at the replication forks; corresponds to BR1480 YP_005616300.1 identified by match to protein family HMM PF02690; corresponds to BR1481 YP_005616301.1 identified by similarity to GP:15075342; match to protein family HMM PF02637; corresponds to BR1482 YP_005616302.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; corresponds to BR1483 YP_005616303.1 corresponds to BR1484 YP_005616304.1 identified by similarity to GP:15074511; match to protein family HMM PF04228; corresponds to BR1485 YP_005616305.1 identified by similarity to GP:15157321; corresponds to BR1486 YP_005616306.1 identified by similarity to GP:15157322; match to protein family HMM PF04397; corresponds to BR1487 YP_005616307.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; corresponds to BR1488 YP_005616308.1 corresponds to BR1489 YP_005616309.1 identified by similarity to GP:2808503; corresponds to BR1490 YP_005616310.1 identified by match to protein family HMM PF00293; corresponds to BR1491 YP_005616311.1 identified by similarity to SP:Q9Z3S6; match to protein family HMM PF00313; corresponds to BR1492 YP_005616312.1 identified by match to protein family HMM PF00043; match to protein family HMM PF02798; corresponds to BR1493 YP_005616313.1 corresponds to BR1494 YP_005616314.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; corresponds to BR1495 YP_005616315.1 corresponds to BR1496 YP_005616316.1 corresponds to BR1497 YP_005616317.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; corresponds to BR1498 YP_005616318.1 identified by similarity to SP:P09625; match to protein family HMM PF00070; match to protein family HMM TIGR01292; corresponds to BR1499 YP_005616319.1 identified by similarity to GP:3288671; match to protein family HMM PF02386; corresponds to BR1500 YP_005616320.1 corresponds to BR1501 YP_005616321.1 identified by similarity to SP:P56901; match to protein family HMM PF01037; corresponds to BR1502 YP_005616322.1 identified by similarity to SP:O68547; match to protein family HMM PF00534; corresponds to BR1503 YP_005616323.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; corresponds to BR1504 YP_005616324.1 identified by similarity to EGAD:91665; corresponds to BR1505 YP_005616325.1 corresponds to BR1506 YP_005616326.1 identified by match to protein family HMM PF00892; corresponds to BR1507 YP_005616327.1 identified by match to protein family HMM PF04342; corresponds to BR1508 YP_005616328.1 identified by similarity to GP:15074829; corresponds to BR1509 YP_005616329.1 identified by match to protein family HMM PF03061; corresponds to BR1510 YP_005616330.1 identified by similarity to GP:15162152; corresponds to BR1511 YP_005616331.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; corresponds to BR1512 YP_005616332.1 identified by match to protein family HMM PF00313; corresponds to BR1514 YP_005616333.1 corresponds to BR1515 YP_005616334.1 identified by similarity to GP:15075354; corresponds to BR1516 YP_005616335.1 identified by match to protein family HMM PF00753; corresponds to BR1517 YP_005616336.1 corresponds to BR1518 YP_005616337.1 corresponds to BR1519 YP_005616338.1 identified by match to protein family HMM PF01047; corresponds to BR1520 YP_005616339.1 identified by similarity to EGAD:19467; match to protein family HMM PF00072; match to protein family HMM PF00486; corresponds to BR1521 YP_005616340.1 identified by similarity to EGAD:163236; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; corresponds to BR1522 YP_005616341.1 corresponds to BR1523 YP_005616342.1 identified by similarity to SP:P37584; match to protein family HMM PF01588; corresponds to BR1524 YP_005616343.1 identified by similarity to OMNI:NTL02ML2065; corresponds to BR1525 YP_005616344.1 identified by similarity to GP:15075365; match to protein family HMM PF04380; corresponds to BR1526 YP_005616345.1 corresponds to BR1527 YP_005616346.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; corresponds to BR1528 YP_005616347.1 identified by similarity to OMNI:NTL02ML2069; match to protein family HMM PF02636; corresponds to BR1529 YP_005616348.1 identified by similarity to OMNI:NTL02ML2070; match to protein family HMM PF02578; match to protein family HMM TIGR00726; corresponds to BR1530 YP_005616349.1 identified by match to protein family HMM PF00557; corresponds to BR1531 YP_005616350.1 identified by similarity to GP:15075370; corresponds to BR1532 YP_005616351.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; corresponds to BR1533 YP_005616352.1 identified by similarity to GP:15074722; corresponds to BR1534 YP_005616353.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; corresponds to BR1535 YP_005616354.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; corresponds to BR1536 YP_005616355.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; corresponds to BR1537 YP_005616356.1 identified by match to protein family HMM PF01575; corresponds to BR1538 YP_005616357.1 identified by match to protein family HMM PF01575; corresponds to BR1539 YP_005616358.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; corresponds to BR1540 YP_005616359.1 identified by match to protein family HMM PF02167; corresponds to BR1541 YP_005616360.1 identified by similarity to EGAD:46867; match to protein family HMM PF00032; match to protein family HMM PF00033; corresponds to BR1542 YP_005616361.1 identified by similarity to EGAD:9907; match to protein family HMM PF00355; match to protein family HMM TIGR01409; match to protein family HMM TIGR01416; corresponds to BR1543 YP_005616362.1 identified by match to protein family HMM PF00588; corresponds to BR1546 YP_005616363.1 corresponds to BR1548 YP_005616364.1 identified by similarity to GP:15074760; corresponds to BR1549 YP_005616365.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; corresponds to BR1550 YP_005616366.1 identified by match to protein family HMM PF00583; corresponds to BR1551 YP_005616367.1 identified by match to protein family HMM PF01743; corresponds to BR1553 YP_005616368.1 identified by match to protein family HMM PF00293; corresponds to BR1554 YP_005616369.1 identified by similarity to OMNI:NTL02ML2109; corresponds to BR1555 YP_005616370.1 identified by similarity to GP:2689172; corresponds to BR1556 YP_005616371.1 identified by similarity to OMNI:NTL02ML2111; match to protein family HMM PF01882; corresponds to BR1557 YP_005616372.1 corresponds to BR1558 YP_005616373.1 identified by similarity to OMNI:NTL02ML2113; corresponds to BR1559 YP_005616374.1 identified by match to protein family HMM PF00583; corresponds to BR1560 YP_005616375.1 corresponds to BR1561 YP_005616376.1 identified by match to protein family HMM PF03922; corresponds to BR1562 YP_005616377.1 identified by match to protein family HMM PF00293; corresponds to BR1563 YP_005616378.1 identified by similarity to GP:14023230; match to protein family HMM PF00149; corresponds to BR1564 YP_005616379.1 corresponds to BR1565 YP_005616380.1 identified by match to protein family HMM PF00682; match to protein family HMM TIGR00970; corresponds to BR1566 YP_005616381.1 corresponds to BR1567 YP_005616382.1 identified by similarity to GP:14023215; match to protein family HMM PF01545; match to protein family HMM TIGR01297; corresponds to BR1568 YP_005616383.1 corresponds to BR1569 YP_005616384.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; corresponds to BR1570 YP_005616385.1 identified by similarity to SP:P19494; match to protein family HMM PF01037; corresponds to BR1571 YP_005616386.1 identified by match to protein family HMM PF01047; corresponds to BR1572 YP_005616387.1 identified by similarity to GP:17430574; corresponds to BR1573 YP_005616388.1 identified by similarity to GP:14027266; corresponds to BR1574 YP_005616389.1 identified by similarity to OMNI:NTL02ML2131; corresponds to BR1575 YP_005616390.1 corresponds to BR1576 YP_005616391.1 corresponds to BR1577 YP_005616392.1 corresponds to BR1578 YP_005616393.1 identified by similarity to GP:19880073; match to protein family HMM PF04069; corresponds to BR1579 YP_005616394.1 identified by similarity to GP:17982347; match to protein family HMM PF00528; corresponds to BR1580 YP_005616395.1 identified by similarity to SP:P46920; match to protein family HMM PF00005; corresponds to BR1581 YP_005616396.1 identified by similarity to SP:P37313; match to protein family HMM PF00005; corresponds to BR1582 YP_005616397.1 identified by similarity to SP:P37314; match to protein family HMM PF00005; corresponds to BR1583 YP_005616398.1 identified by similarity to SP:P94312; match to protein family HMM PF00528; corresponds to BR1584 YP_005616399.1 identified by similarity to SP:P94311; match to protein family HMM PF00528; corresponds to BR1585 YP_005616400.1 corresponds to BR1587 YP_005616401.1 corresponds to BR1588 YP_005616402.1 identified by match to protein family HMM PF01022; corresponds to BR1589 YP_005616403.1 identified by match to protein family HMM PF00588; corresponds to BR1590 YP_005616404.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; corresponds to BR1591 YP_005616405.1 corresponds to BR1592 YP_005616406.1 identified by similarity to GP:15075739; corresponds to BR1593 YP_005616407.1 identified by similarity to GP:15075740; corresponds to BR1594 YP_005616408.1 identified by similarity to GP:14023239; corresponds to BR1595 YP_005616409.1 identified by similarity to GP:17740928; corresponds to BR1596 YP_005616410.1 corresponds to BR1597 YP_005616411.1 identified by similarity to OMNI:NTL02ML2168; corresponds to BR1598 YP_005616412.1 identified by similarity to EGAD:41053; match to protein family HMM PF00072; match to protein family HMM PF00486; corresponds to BR1599 YP_005616413.1 identified by similarity to GP:15075741; corresponds to BR1600 YP_005616414.1 identified by match to protein family HMM PF01041; corresponds to BR1601 YP_005616415.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; corresponds to BR1602 YP_005616416.1 corresponds to BR1603 YP_005616417.1 corresponds to BR1604 YP_005616418.1 identified by match to protein family HMM PF01755; corresponds to BR1605 YP_005616419.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; corresponds to BR1606 YP_005616420.1 corresponds to BR1607 YP_005616421.1 identified by similarity to EGAD:20142; match to protein family HMM PF05170; corresponds to BR1608 YP_005616422.1 identified by similarity to GP:16502083; match to protein family HMM PF00528; corresponds to BR1609 YP_005616423.1 identified by similarity to SP:P23860; match to protein family HMM PF00528; corresponds to BR1610 YP_005616424.1 identified by similarity to SP:P31134; match to protein family HMM PF00005; match to protein family HMM TIGR01187; corresponds to BR1611 YP_005616425.1 identified by similarity to GP:15979381; match to protein family HMM PF01547; corresponds to BR1612 YP_005616426.1 identified by match to protein family HMM PF01381; corresponds to BR1613 YP_005616427.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; corresponds to BR1614 YP_005616428.1 identified by similarity to OMNI:NTL02ML5126; corresponds to BR1615 YP_005616429.1 corresponds to BR1616 YP_005616430.1 corresponds to BR1617 YP_005616431.1 Acts on the hydroxyl group at position 7 of the steroid frame; corresponds to BR1618 YP_005616432.1 identified by similarity to EGAD:23950; match to protein family HMM PF00106; corresponds to BR1619 YP_005616433.1 corresponds to BR1620 YP_005616434.1 identified by similarity to EGAD:10584; match to protein family HMM PF01914; corresponds to BR1621 YP_005616435.1 identified by similarity to EGAD:150060; match to protein family HMM PF01389; corresponds to BR1622 YP_005616436.1 corresponds to BR1623 YP_005616437.1 corresponds to BR1624 YP_005616438.1 corresponds to BR1625 YP_005616439.1 corresponds to BR1626 YP_005616440.1 identified by match to protein family HMM PF00106; corresponds to BR1629 YP_005616441.1 identified by similarity to OMNI:NTL02ML0801; match to protein family HMM PF00532; corresponds to BR1630 YP_005616442.1 identified by similarity to SP:P04984; match to protein family HMM PF02653; corresponds to BR1631 YP_005616443.1 identified by similarity to SP:P04983; match to protein family HMM PF00005; corresponds to BR1632 YP_005616444.1 corresponds to BR1633 YP_005616445.1 corresponds to BR1634 YP_005616446.1 corresponds to BR1635 YP_005616447.1 corresponds to BR1637 YP_005616448.1 corresponds to BR1638 YP_005616449.1 identified by match to protein family HMM PF01614; corresponds to BR1639 YP_005616450.1 identified by similarity to EGAD:16804; match to protein family HMM PF00171; match to protein family HMM TIGR01780; corresponds to BR1640 YP_005616451.1 corresponds to BR1641 YP_005616452.1 corresponds to BR1642 YP_005616453.1 identified by match to protein family HMM PF01844; corresponds to BR1643 YP_005616454.1 corresponds to BR1644 YP_005616455.1 corresponds to BR1645 YP_005616456.1 identified by match to protein family HMM PF00730; corresponds to BR1646 YP_005616457.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; corresponds to BR1647 YP_005616458.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; corresponds to BR1648 YP_005616459.1 identified by match to protein family HMM PF00583; corresponds to BR1649 YP_005616460.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; corresponds to BR1650 YP_005616461.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; corresponds to BR1651 YP_005616462.1 corresponds to BR1652 YP_005616463.1 corresponds to BR1653 YP_005616464.1 identified by similarity to SP:O30976; match to protein family HMM PF01475; corresponds to BR1654 YP_005616465.1 corresponds to BR1655 YP_005616466.1 corresponds to BR1656 YP_005616467.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; corresponds to BR1657 YP_005616468.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; corresponds to BR1658 YP_005616469.1 identified by match to protein family HMM PF02518; match to protein family HMM PF05227; corresponds to BR1659 YP_005616470.1 corresponds to BR1660 YP_005616471.1 identified by similarity to OMNI:NTL02ML2854; corresponds to BR1661 YP_005616472.1 identified by similarity to OMNI:NTL02ML2849; match to protein family HMM PF05239; corresponds to BR1662 YP_005616473.1 corresponds to BR1663 YP_005616474.1 corresponds to BR1664 YP_005616475.1 corresponds to BR1665 YP_005616476.1 identified by similarity to SP:P18783; match to protein family HMM PF01618; corresponds to BR1666 YP_005616477.1 identified by similarity to SP:Q05606; match to protein family HMM PF02472; corresponds to BR1667 YP_005616478.1 identified by match to protein family HMM TIGR01352; corresponds to BR1668 YP_005616479.1 identified by similarity to GP:15074996; corresponds to BR1669 YP_005616480.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; corresponds to BR1671 YP_005616481.1 identified by similarity to EGAD:46813; corresponds to BR1672 YP_005616482.1 identified by similarity to PIR:PN0685; match to protein family HMM PF01609; corresponds to BR1673 YP_005616483.1 corresponds to BR1674 YP_005616484.1 catalyzes the formation of dUMP from dUTP; corresponds to BR1675 YP_005616485.1 identified by match to protein family HMM PF01037; match to protein family HMM TIGR01199; corresponds to BR1676 YP_005616486.1 identified by similarity to OMNI:NTL02ML4136; corresponds to BR1677 YP_005616487.1 identified by similarity to GP:13932326; match to protein family HMM PF00310; corresponds to BR1678 YP_005616488.1 identified by match to protein family HMM PF01988; corresponds to BR1679 YP_005616489.1 identified by match to protein family HMM PF00083; corresponds to BR1680 YP_005616490.1 identified by similarity to OMNI:NTL02ML2989; corresponds to BR1681 YP_005616491.1 corresponds to BR1682 YP_005616492.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; corresponds to BR1683 YP_005616493.1 identified by match to protein family HMM PF00583; corresponds to BR1684 YP_005616494.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; corresponds to BR1685 YP_005616495.1 corresponds to BR1686 YP_005616496.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; corresponds to BR1687 YP_005616497.1 identified by match to protein family HMM PF01758; corresponds to BR1688 YP_005616498.1 identified by similarity to GP:17742129; corresponds to BR1689 YP_005616499.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455; corresponds to BR1690 YP_005616500.1 identified by similarity to EGAD:13183; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM TIGR01241; corresponds to BR1691 YP_005616501.1 identified by similarity to GP:15075760; match to protein family HMM PF01171; corresponds to BR1692 YP_005616502.1 corresponds to BR1693 YP_005616503.1 corresponds to BR1694 YP_005616504.1 identified by similarity to EGAD:9123; match to protein family HMM PF00691; corresponds to BR1695 YP_005616505.1 corresponds to BR1696 YP_005616506.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; corresponds to BR1697 YP_005616507.1 identified by similarity to GP:13898975; corresponds to BR1698 YP_005616508.1 identified by match to protein family HMM PF02472; corresponds to BR1699 YP_005616509.1 identified by match to protein family HMM PF01618; corresponds to BR1700 YP_005616510.1 corresponds to BR1701 YP_005616511.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; corresponds to BR1702 YP_005616512.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; corresponds to BR1703 YP_005616513.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; corresponds to BR1704 YP_005616514.1 identified by similarity to OMNI:NTL02ML3016; corresponds to BR1705 YP_005616515.1 identified by similarity to GP:9961345; corresponds to BR1706 YP_005616516.1 catalyzes the formation of thiamine monophosphate from 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate and 4-methyl-5-(2-phosphono-oxyethyl)-thiazole; corresponds to BR1707 YP_005616517.1 identified by similarity to GP:14024100; corresponds to BR1708 YP_005616518.1 corresponds to BR1709 YP_005616519.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; corresponds to BR1710 YP_005616520.1 identified by similarity to EGAD:15335; match to protein family HMM PF00459; corresponds to BR1711 YP_005616521.1 corresponds to BR1712 YP_005616522.1 identified by similarity to GP:15075801; corresponds to BR1713 YP_005616523.1 identified by match to protein family HMM PF00691; corresponds to BR1714 YP_005616524.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; corresponds to BR1715 YP_005616525.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; corresponds to BR1716 YP_005616526.1 identified by similarity to GP:15075777; match to protein family HMM PF01709; match to protein family HMM TIGR01033; corresponds to BR1717 YP_005616527.1 identified by match to protein family HMM PF02632; corresponds to BR1719 YP_005616528.1 identified by similarity to GP:14026938; corresponds to BR1720 YP_005616529.1 identified by similarity to OMNI:NTL02ML3047; match to protein family HMM PF03741; corresponds to BR1721 YP_005616530.1 identified by similarity to OMNI:NTL02ML3048; match to protein family HMM PF00149; match to protein family HMM TIGR00282; corresponds to BR1722 YP_005616531.1 identified by match to protein family HMM PF01812; corresponds to BR1723 YP_005616532.1 identified by similarity to OMNI:NTL02ML2891; match to protein family HMM PF05164; corresponds to BR1724 YP_005616533.1 corresponds to BR1725 YP_005616534.1 corresponds to BR1726 YP_005616535.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; corresponds to BR1727 YP_005616536.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; corresponds to BR1728 YP_005616537.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; corresponds to BR1729 YP_005616538.1 identified by similarity to GP:15075794; corresponds to BR1730 YP_005616539.1 identified by match to protein family HMM PF00501; corresponds to BR1731 YP_005616540.1 identified by similarity to GP:7206791; corresponds to BR1732 YP_005616541.1 corresponds to BR1733 YP_005616542.1 corresponds to BR1734 YP_005616543.1 corresponds to BR1735 YP_005616544.1 identified by similarity to OMNI:CC2103; match to protein family HMM PF03061; match to protein family HMM TIGR00369; corresponds to BR1736 YP_005616545.1 identified by similarity to GP:15076354; corresponds to BR1737 YP_005616546.1 identified by match to protein family HMM PF00107; corresponds to BR1738 YP_005616547.1 identified by similarity to GP:15075796; corresponds to BR1739 YP_005616548.1 corresponds to BR1740 YP_005616549.1 identified by match to protein family HMM PF04325; corresponds to BR1741 YP_005616550.1 corresponds to BR1742 YP_005616551.1 identified by similarity to OMNI:NTL02ML2929; match to protein family HMM PF04325; corresponds to BR1743 YP_005616552.1 identified by similarity to SP:P09028; match to protein family HMM PF00731; match to protein family HMM TIGR01162; corresponds to BR1744 YP_005616553.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; corresponds to BR1745 YP_005616554.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; corresponds to BR1746 YP_005616555.1 identified by match to protein family HMM PF00515; corresponds to BR1747 YP_005616556.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; corresponds to BR1748 YP_005616557.1 corresponds to BR1749 YP_005616558.1 identified by match to protein family HMM PF05013; corresponds to BR1750 YP_005616559.1 corresponds to BR1751 YP_005616560.1 corresponds to BR1752 YP_005616561.1 identified by similarity to GP:15157929; match to protein family HMM PF00005; corresponds to BR1753 YP_005616562.1 corresponds to BR1754 YP_005616563.1 corresponds to BR1755 YP_005616564.1 identified by similarity to OMNI:NTL02ML2986; match to protein family HMM PF04263; corresponds to BR1756 YP_005616565.1 part of the thiamine and TPP transport system tbpA-thiPQ; corresponds to BR1757 YP_005616566.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; corresponds to BR1758 YP_005616567.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01277; corresponds to BR1759 YP_005616568.1 corresponds to BR1760 YP_005616569.1 identified by match to protein family HMM PF01435; corresponds to BR1761 YP_005616570.1 identified by similarity to OMNI:NTL03PA02229; match to protein family HMM PF03473; corresponds to BR1762 YP_005616571.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production; corresponds to BR1763 YP_005616572.1 corresponds to BR1764 YP_005616573.1 corresponds to BR1765 YP_005616574.1 identified by similarity to OMNI:NTL02ML2976; match to protein family HMM PF02559; corresponds to BR1766 YP_005616575.1 identified by similarity to EGAD:22805; match to protein family HMM PF00037; corresponds to BR1767 YP_005616576.1 corresponds to BR1768 YP_005616577.1 identified by match to protein family HMM PF01479; corresponds to BR1769 YP_005616578.1 corresponds to BR1771 YP_005616579.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; corresponds to BR1772 YP_005616580.1 corresponds to BR1773 YP_005616581.1 identified by similarity to OMNI:NTL02ML2916; match to protein family HMM PF03928; corresponds to BR1774 YP_005616582.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; corresponds to BR1775 YP_005616583.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; corresponds to BR1776 YP_005616584.1 identified by similarity to SP:Q08291; match to protein family HMM PF00348; corresponds to BR1777 YP_005616585.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; corresponds to BR1778 YP_005616586.1 identified by similarity to SP:O86034; match to protein family HMM PF00106; match to protein family HMM TIGR01963; corresponds to BR1779 YP_005616587.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; corresponds to BR1781 YP_005616588.1 identified by similarity to SP:P04816; match to protein family HMM PF01094; corresponds to BR1782 YP_005616589.1 corresponds to BR1783 YP_005616590.1 corresponds to BR1784 YP_005616591.1 identified by similarity to SP:P04816; match to protein family HMM PF01094; corresponds to BR1785 YP_005616592.1 corresponds to BR1786 YP_005616593.1 identified by similarity to OMNI:NTL02ML3062; corresponds to BR1787 YP_005616594.1 identified by match to protein family HMM PF00005; corresponds to BR1789 YP_005616595.1 identified by match to protein family HMM PF02653; corresponds to BR1790 YP_005616596.1 identified by match to protein family HMM PF02653; corresponds to BR1791 YP_005616597.1 identified by similarity to GP:9695312; match to protein family HMM PF05544; corresponds to BR1792 YP_005616598.1 corresponds to BR1794 YP_005616599.1 identified by match to protein family HMM PF00392; corresponds to BR1795 YP_005616600.1 identified by similarity to EGAD:16739; match to protein family HMM PF01047; corresponds to BR1796 YP_005616601.1 corresponds to BR1797 YP_005616602.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; corresponds to BR1798 YP_005616603.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; corresponds to BR1799 YP_005616604.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; corresponds to BR1800 YP_005616605.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; corresponds to BR1801 YP_005616606.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; corresponds to BR1802 YP_005616607.1 identified by similarity to GP:15076063; corresponds to BR1803 YP_005616608.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; corresponds to BR1804 YP_005616609.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; corresponds to BR1805 YP_005616610.1 identified by similarity to OMNI:NTL02ML3139; corresponds to BR1806 YP_005616611.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; corresponds to BR1807 YP_005616612.1 identified by similarity to OMNI:NTL02ML3141; match to protein family HMM PF01168; match to protein family HMM TIGR00044; corresponds to BR1808 YP_005616613.1 corresponds to BR1809 YP_005616614.1 identified by similarity to EGAD:13628; corresponds to BR1810 YP_005616615.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; corresponds to BR1811 YP_005616616.1 identified by similarity to GP:14024231; corresponds to BR1812 YP_005616617.1 putative metalloprotease; corresponds to BR1813 YP_005616618.1 identified by match to protein family HMM PF01029; match to protein family HMM PF01189; corresponds to BR1814 YP_005616619.1 identified by similarity to GP:14024235; corresponds to BR1815 YP_005616620.1 involved in de novo purine biosynthesis; corresponds to BR1816 YP_005616621.1 corresponds to BR1817 YP_005616622.1 corresponds to BR1818 YP_005616623.1 identified by similarity to GP:15076346; match to protein family HMM PF05088; match to protein family HMM TIGR01612; corresponds to BR1819 YP_005616624.1 identified by similarity to GP:14024253; corresponds to BR1820 YP_005616625.1 identified by similarity to GP:14024255; match to protein family HMM PF04536; corresponds to BR1821 YP_005616626.1 identified by similarity to EGAD:149857; match to protein family HMM PF04011; corresponds to BR1822 YP_005616627.1 corresponds to BR1823 YP_005616628.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; corresponds to BR1824 YP_005616629.1 catalyzes the interconversion of chorismate to prephenate; corresponds to BR1825 YP_005616630.1 identified by similarity to EGAD:6526; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; corresponds to BR1826 YP_005616631.1 corresponds to BR1827 YP_005616632.1 identified by similarity to OMNI:VC1956; corresponds to BR1828 YP_005616633.1 identified by match to protein family HMM PF00484; corresponds to BR1829 YP_005616634.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; corresponds to BR1830 YP_005616635.1 identified by similarity to OMNI:NTL02ML3181; corresponds to BR1831 YP_005616636.1 identified by similarity to SP:P28810; match to protein family HMM PF00171; match to protein family HMM TIGR01722; corresponds to BR1832 YP_005616637.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; corresponds to BR1833 YP_005616638.1 identified by similarity to OMNI:NTL03PA00256; corresponds to BR1834 YP_005616639.1 corresponds to BR1835 YP_005616640.1 hydrolyzes diadenosine polyphosphate; corresponds to BR1836 YP_005616641.1 identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; corresponds to BR1837 YP_005616642.1 corresponds to BR1838 YP_005616643.1 corresponds to BR1839 YP_005616644.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; corresponds to BR1840 YP_005616645.1 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; corresponds to BR1841 YP_005616646.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; corresponds to BR1842 YP_005616647.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; corresponds to BR1843 YP_005616648.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; corresponds to BR1844 YP_005616649.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; corresponds to BR1845 YP_005616650.1 corresponds to BR1846 YP_005616651.1 identified by match to protein family HMM PF00583; corresponds to BR1847 YP_005616652.1 identified by match to protein family HMM PF00583; corresponds to BR1848 YP_005616653.1 involved in the peptidyltransferase reaction during translation; corresponds to BR1849 YP_005616654.1 identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; corresponds to BR1850 YP_005616655.1 corresponds to BR1851 YP_005616656.1 identified by match to protein family HMM PF01381; corresponds to BR1852 YP_005616657.1 identified by match to protein family HMM PF03591; corresponds to BR1853 YP_005616658.1 corresponds to BR1854 YP_005616659.1 corresponds to BR1855 YP_005616660.1 identified by similarity to OMNI:CC1732; corresponds to BR1856 YP_005616661.1 corresponds to BR1857 YP_005616662.1 corresponds to BR1858 YP_005616663.1 corresponds to BR1859 YP_005616664.1 corresponds to BR1860 YP_005616665.1 identified by match to protein family HMM PF01551; corresponds to BR1861 YP_005616666.1 identified by similarity to GP:15075231; match to protein family HMM PF03734; corresponds to BR1862 YP_005616667.1 corresponds to BR1863 YP_005616668.1 identified by similarity to EGAD:20010; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM TIGR01369; corresponds to BR1864 YP_005616669.1 identified by similarity to GP:15159086; corresponds to BR1865 YP_005616670.1 corresponds to BR1866 YP_005616671.1 corresponds to BR1867 YP_005616672.1 identified by match to protein family HMM TIGR00536; corresponds to BR1868 YP_005616673.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; corresponds to BR1869 YP_005616674.1 identified by similarity to EGAD:36619; match to protein family HMM PF00391; match to protein family HMM PF01590; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; corresponds to BR1870 YP_005616675.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; corresponds to BR1871 YP_005616676.1 Involved in ubiquinone biosynthesis; corresponds to BR1872 YP_005616677.1 identified by match to protein family HMM PF00892; corresponds to BR1873 YP_005616678.1 identified by similarity to GP:15159831; corresponds to BR1874 YP_005616679.1 identified by match to protein family HMM PF00795; corresponds to BR1875 YP_005616680.1 identified by similarity to SP:P37687; match to protein family HMM PF00462; corresponds to BR1876 YP_005616681.1 corresponds to BR1877 YP_005616682.1 identified by similarity to EGAD:18112; corresponds to BR1878 YP_005616683.1 identified by similarity to GP:15075644; corresponds to BR1879 YP_005616684.1 corresponds to BR1880 YP_005616685.1 identified by similarity to GP:14024323; corresponds to BR1882 YP_005616686.1 corresponds to BR1883 YP_005616687.1 identified by similarity to GP:15076107; corresponds to BR1884 YP_005616688.1 identified by similarity to OMNI:NTL02ML3249; corresponds to BR1885 YP_005616689.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; corresponds to BR1886 YP_005616690.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; corresponds to BR1887 YP_005616691.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; corresponds to BR1888 YP_005616692.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; corresponds to BR1889 YP_005616693.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; corresponds to BR1890 YP_005616694.1 identified by similarity to GP:15157855; match to protein family HMM PF04543; corresponds to BR1891 YP_005616695.1 identified by similarity to GP:15076099; corresponds to BR1892 YP_005616696.1 identified by match to protein family HMM PF00892; corresponds to BR1893 YP_005616697.1 identified by similarity to EGAD:30442; match to protein family HMM PF01580; corresponds to BR1895 YP_005616698.1 identified by similarity to GP:3136068; match to protein family HMM PF00909; match to protein family HMM TIGR00836; corresponds to BR1896 YP_005616699.1 corresponds to BR1897 YP_005616700.1 identified by similarity to SP:P23911; match to protein family HMM PF02551; match to protein family HMM TIGR00189; corresponds to BR1898 YP_005616701.1 identified by match to protein family HMM PF01360; corresponds to BR1899 YP_005616702.1 identified by match to protein family HMM PF00903; corresponds to BR1900 YP_005616703.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; corresponds to BR1901 YP_005616704.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; corresponds to BR1902 YP_005616705.1 identified by similarity to EGAD:23053; match to protein family HMM PF01127; corresponds to BR1903 YP_005616706.1 identified by similarity to EGAD:15755; match to protein family HMM PF01127; corresponds to BR1904 YP_005616707.1 identified by match to protein family HMM PF00583; corresponds to BR1905 YP_005616708.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; corresponds to BR1906 YP_005616709.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; corresponds to BR1907 YP_005616710.1 identified by match to protein family HMM PF02133; corresponds to BR1908 YP_005616711.1 identified by similarity to GP:7739616; corresponds to BR1910 YP_005616712.1 identified by similarity to GP:15156392; match to protein family HMM PF03992; corresponds to BR1911 YP_005616713.1 identified by similarity to GP:15156391; corresponds to BR1912 YP_005616714.1 identified by match to protein family HMM PF01022; corresponds to BR1913 YP_005616715.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; corresponds to BR1914 YP_005616716.1 Essential for efficient processing of 16S rRNA; corresponds to BR1915 YP_005616717.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; corresponds to BR1916 YP_005616718.1 identified by similarity to GP:15157831; corresponds to BR1917 YP_005616719.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; corresponds to BR1918 YP_005616720.1 identified by similarity to GP:14024383; corresponds to BR1919 YP_005616721.1 identified by match to protein family HMM PF01810; corresponds to BR1920 YP_005616722.1 identified by similarity to GP:15157838; match to protein family HMM PF01124; corresponds to BR1921 YP_005616723.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; corresponds to BR1922 YP_005616724.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; corresponds to BR1923 YP_005616725.1 corresponds to BR1924 YP_005616726.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; corresponds to BR1925 YP_005616727.1 catalyzes the interconversion of succinyl-CoA and succinate; corresponds to BR1926 YP_005616728.1 Catalyzes the reversible oxidation of malate to oxaloacetate; corresponds to BR1927 YP_005616729.1 corresponds to BR1928 YP_005616730.1 identified by similarity to GP:15076082; match to protein family HMM PF03969; corresponds to BR1929 YP_005616731.1 identified by similarity to GP:954748; corresponds to BR1930 YP_005616732.1 corresponds to BR1931 YP_005616733.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; corresponds to BR1932 YP_005616734.1 identified by similarity to GP:15076264; match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; corresponds to BR1933 YP_005616735.1 identified by similarity to EGAD:5681; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; corresponds to BR1934 YP_005616736.1 Involved in cell division; probably involved in intracellular septation; corresponds to BR1935 YP_005616737.1 identified by similarity to EGAD:35929; match to protein family HMM PF00753; corresponds to BR1936 YP_005616738.1 corresponds to BR1937 YP_005616739.1 identified by similarity to OMNI:NTL02ML2661; corresponds to BR1938 YP_005616740.1 identified by similarity to EGAD:16514; match to protein family HMM PF00293; corresponds to BR1939 YP_005616741.1 identified by match to protein family HMM PF00583; corresponds to BR1940 YP_005616742.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; corresponds to BR1941 YP_005616743.1 corresponds to BR1942 YP_005616744.1 identified by similarity to EGAD:7364; match to protein family HMM PF00639; corresponds to BR1943 YP_005616745.1 corresponds to BR1944 YP_005616746.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; corresponds to BR1945 YP_005616747.1 corresponds to BR1946 YP_005616748.1 identified by similarity to GP:14023746; corresponds to BR1947 YP_005616749.1 identified by match to protein family HMM PF00884; match to protein family HMM PF02418; corresponds to BR1948 YP_005616750.1 corresponds to BR1949 YP_005616751.1 corresponds to BR1950 YP_005616752.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; corresponds to BR1951 YP_005616753.1 corresponds to BR1952 YP_005616754.1 identified by match to protein family HMM PF00497; corresponds to BR1953 YP_005616755.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; corresponds to BR1955 YP_005616756.1 identified by match to protein family HMM PF00005; corresponds to BR1956 YP_005616757.1 identified by match to protein family HMM PF00491; corresponds to BR1957 YP_005616758.1 catalyzes the formation of fumarate from aspartate; corresponds to BR1958 YP_005616759.1 identified by similarity to EGAD:31037; match to protein family HMM PF00005; corresponds to BR1959 YP_005616760.1 identified by similarity to EGAD:14317; match to protein family HMM PF00710; corresponds to BR1960 YP_005616761.1 identified by match to protein family HMM PF00392; corresponds to BR1961 YP_005616762.1 identified by similarity to SP:P43843; match to protein family HMM PF00710; corresponds to BR1962 YP_005616763.1 identified by match to protein family HMM PF00083; corresponds to BR1963 YP_005616764.1 corresponds to BR1964 YP_005616765.1 catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; corresponds to BR1965 YP_005616766.1 identified by match to protein family HMM PF00582; corresponds to BR1966 YP_005616767.1 corresponds to BR1968 YP_005616768.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; corresponds to BR1969 YP_005616769.1 identified by similarity to SP:P38974; match to protein family HMM PF00766; corresponds to BR1970 YP_005616770.1 identified by similarity to EGAD:17375; match to protein family HMM PF01012; corresponds to BR1971 YP_005616771.1 identified by match to protein family HMM TIGR00364; corresponds to BR1972 YP_005616772.1 identified by match to protein family HMM PF01242; corresponds to BR1973 YP_005616773.1 identified by match to protein family HMM PF04055; corresponds to BR1974 YP_005616774.1 identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; corresponds to BR1975 YP_005616775.1 identified by similarity to OMNI:NTL02ML2682; corresponds to BR1976 YP_005616776.1 identified by match to protein family HMM PF00106; corresponds to BR1977 YP_005616777.1 identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; corresponds to BR1978 YP_005616778.1 identified by match to protein family HMM PF02639; corresponds to BR1979 YP_005616779.1 corresponds to BR1980 YP_005616780.1 catalyzes the formation of arginine from (N-L-arginino)succinate; corresponds to BR1981 YP_005616781.1 corresponds to BR1982 YP_005616782.1 identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; corresponds to BR1983 YP_005616783.1 identified by similarity to GP:15075674; corresponds to BR1984 YP_005616784.1 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; corresponds to BR1985 YP_005616785.1 identified by similarity to GP:15075687; corresponds to BR1986 YP_005616786.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; corresponds to BR1987 YP_005616787.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; corresponds to BR1988 YP_005616788.1 identified by similarity to OMNI:NTL02ML2723; corresponds to BR1989 YP_005616789.1 corresponds to BR1990 YP_005616790.1 identified by similarity to SP:P39163; match to protein family HMM PF04752; corresponds to BR1991 YP_005616791.1 identified by similarity to EGAD:140445; match to protein family HMM PF02325; corresponds to BR1992 YP_005616792.1 catalyzes the hydrolysis of pyrophosphate to phosphate; corresponds to BR1993 YP_005616793.1 identified by match to protein family HMM PF01553; corresponds to BR1994 YP_005616794.1 identified by similarity to GP:15075681; corresponds to BR1995 YP_005616795.1 identified by similarity to OMNI:NTL02ML2714; corresponds to BR1996 YP_005616796.1 identified by similarity to EGAD:7038; match to protein family HMM PF00005; corresponds to BR1997 YP_005616797.1 corresponds to BR1998 YP_005616798.1 corresponds to BR1999 YP_005616799.1 corresponds to BR2000 YP_005616800.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; corresponds to BR2001 YP_005616801.1 corresponds to BR2002 YP_005616802.1 identified by similarity to GP:15157980; corresponds to BR2003 YP_005616803.1 identified by similarity to OMNI:NTL02ML3264; match to protein family HMM PF03372; match to protein family HMM TIGR00633; corresponds to BR2004 YP_005616804.1 identified by match to protein family HMM PF00027; corresponds to BR2005 YP_005616805.1 identified by similarity to OMNI:NTL02ML3262; match to protein family HMM PF00072; match to protein family HMM PF00486; corresponds to BR2006 YP_005616806.1 identified by similarity to GP:14024337; corresponds to BR2007 YP_005616807.1 corresponds to BR2008 YP_005616808.1 corresponds to BR2009 YP_005616809.1 corresponds to BR2010 YP_005616810.1 corresponds to BR2011 YP_005616811.1 corresponds to BR2012 YP_005616812.1 identified by similarity to GP:15162141; match to protein family HMM PF03797; match to protein family HMM TIGR01414; match to protein family HMM TIGR01612; corresponds to BR2013 YP_005616813.1 identified by similarity to GP:15075693; match to protein family HMM PF02592; match to protein family HMM TIGR00697; corresponds to BR2014 YP_005616814.1 required for 70S ribosome assembly; corresponds to BR2015 YP_005616815.1 identified by similarity to OMNI:NTL02ML2738; corresponds to BR2016 YP_005616816.1 identified by match to protein family HMM PF00376; corresponds to BR2017 YP_005616817.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; corresponds to BR2018 YP_005616818.1 identified by similarity to GP:15141324; corresponds to BR2019 YP_005616819.1 corresponds to BR2020 YP_005616820.1 identified by similarity to SP:P29934; match to protein family HMM TIGR01651; corresponds to BR2021 YP_005616821.1 identified by similarity to SP:P29933; match to protein family HMM TIGR01650; corresponds to BR2022 YP_005616822.1 corresponds to BR2023 YP_005616823.1 identified by match to protein family HMM PF00226; corresponds to BR2024 YP_005616824.1 corresponds to BR2025 YP_005616825.1 identified by similarity to SP:P15298; match to protein family HMM PF01722; corresponds to BR2026 YP_005616826.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; corresponds to BR2027 YP_005616827.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; corresponds to BR2028 YP_005616828.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; corresponds to BR2029 YP_005616829.1 corresponds to BR2030 YP_005616830.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; corresponds to BR2031 YP_005616831.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; corresponds to BR2032 YP_005616832.1 identified by similarity to GP:15159690; corresponds to BR2033 YP_005616833.1 identified by similarity to GP:15075708; match to protein family HMM PF01206; corresponds to BR2034 YP_005616834.1 identified by match to protein family HMM PF02492; corresponds to BR2035 YP_005616835.1 identified by match to protein family HMM PF00768; corresponds to BR2036 YP_005616836.1 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; corresponds to BR2037 YP_005616837.1 corresponds to BR2038 YP_005616838.1 identified by similarity to EGAD:23256; match to protein family HMM PF00106; corresponds to BR2039 YP_005616839.1 identified by similarity to GP:15157579; match to protein family HMM PF04828; corresponds to BR2040 YP_005616840.1 identified by similarity to OMNI:NTL03PA01934; corresponds to BR2041 YP_005616841.1 identified by similarity to EGAD:149670; match to protein family HMM PF00732; match to protein family HMM PF05199; corresponds to BR2042 YP_005616842.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; corresponds to BR2043 YP_005616843.1 corresponds to BR2044 YP_005616844.1 identified by similarity to EGAD:149672; match to protein family HMM PF00171; corresponds to BR2045 YP_005616845.1 identified by match to protein family HMM PF00378; corresponds to BR2046 YP_005616846.1 identified by match to protein family HMM PF01144; corresponds to BR2047 YP_005616847.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; corresponds to BR2048 YP_005616848.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; corresponds to BR2049 YP_005616849.1 identified by similarity to GP:15076333; corresponds to BR2050 YP_005616850.1 identified by match to protein family HMM PF00296; corresponds to BR2051 YP_005616851.1 corresponds to BR2052 YP_005616852.1 identified by similarity to GP:15076239; match to protein family HMM PF04392; corresponds to BR2053 YP_005616853.1 corresponds to BR2054 YP_005616854.1 identified by match to protein family HMM PF02653; corresponds to BR2055 YP_005616855.1 identified by match to protein family HMM PF00005; corresponds to BR2056 YP_005616856.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; corresponds to BR2057 YP_005616857.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; corresponds to BR2058 YP_005616858.1 identified by similarity to SP:O05189; match to protein family HMM PF00991; corresponds to BR2059 YP_005616859.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; corresponds to BR2060 YP_005616860.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; corresponds to BR2061 YP_005616861.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; corresponds to BR2062 YP_005616862.1 identified by similarity to GP:14024528; match to protein family HMM PF03190; corresponds to BR2063 YP_005616863.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; corresponds to BR2064 YP_005616864.1 identified by similarity to OMNI:NTL02ML3455; match to protein family HMM PF03653; match to protein family HMM TIGR00701; corresponds to BR2065 YP_005616865.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; corresponds to BR2066 YP_005616866.1 identified by similarity to GP:14024532; match to protein family HMM PF03618; corresponds to BR2067 YP_005616867.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; corresponds to BR2068 YP_005616868.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; corresponds to BR2069 YP_005616869.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; corresponds to BR2070 YP_005616870.1 3'-5' exonuclease of DNA polymerase III; corresponds to BR2071 YP_005616871.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; corresponds to BR2072 YP_005616872.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; corresponds to BR2073 YP_005616873.1 identified by similarity to GP:15154866; corresponds to BR2074 YP_005616874.1 identified by match to protein family HMM PF03562; corresponds to BR2075 YP_005616875.1 identified by match to protein family HMM PF01713; corresponds to BR2076 YP_005616876.1 identified by similarity to GP:15154869; match to protein family HMM PF01381; corresponds to BR2077 YP_005616877.1 identified by similarity to GP:15154911; corresponds to BR2078 YP_005616878.1 heat shock protein involved in degradation of misfolded proteins; corresponds to BR2079 YP_005616879.1 heat shock protein involved in degradation of misfolded proteins; corresponds to BR2080 YP_005616880.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; corresponds to BR2081 YP_005616881.1 identified by similarity to GP:15072982; corresponds to BR2082 YP_005616882.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; corresponds to BR2083 YP_005616883.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; corresponds to BR2084 YP_005616884.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; corresponds to BR2085 YP_005616885.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; corresponds to BR2086 YP_005616886.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; corresponds to BR2087 YP_005616887.1 identified by match to protein family HMM PF00472; corresponds to BR2088 YP_005616888.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; corresponds to BR2089 YP_005616889.1 identified by similarity to GP:2947107; match to protein family HMM PF00072; match to protein family HMM PF00486; corresponds to BR2090 YP_005616890.1 identified by similarity to GP:2947211; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; corresponds to BR2091 YP_005616891.1 identified by similarity to GP:14024999; corresponds to BR2092 YP_005616892.1 corresponds to BR2093 YP_005616893.1 identified by similarity to EGAD:7066; match to protein family HMM PF03610; corresponds to BR2094 YP_005616894.1 identified by similarity to SP:P08877; match to protein family HMM PF00381; match to protein family HMM TIGR01003; corresponds to BR2095 YP_005616895.1 corresponds to BR2096 YP_005616896.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; corresponds to BR2097 YP_005616897.1 corresponds to BR2098 YP_005616898.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; corresponds to BR2099 YP_005616899.1 identified by similarity to OMNI:NTL02ML3919; match to protein family HMM PF02367; match to protein family HMM TIGR00150; corresponds to BR2100 YP_005616900.1 identified by similarity to GP:14024993; match to protein family HMM PF00483; corresponds to BR2101 YP_005616901.1 identified by similarity to OMNI:NTL02ML3917; corresponds to BR2102 YP_005616902.1 identified by similarity to OMNI:CC3538; match to protein family HMM PF00580; corresponds to BR2103 YP_005616903.1 corresponds to BR2104 YP_005616904.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; corresponds to BR2105 YP_005616905.1 identified by match to protein family HMM TIGR01499; corresponds to BR2106 YP_005616906.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; corresponds to BR2107 YP_005616907.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; corresponds to BR2108 YP_005616908.1 corresponds to BR2109 YP_005616909.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; corresponds to BR2110 YP_005616910.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; corresponds to BR2111 YP_005616911.1 identified by similarity to OMNI:VC1698; corresponds to BR2112 YP_005616912.1 identified by similarity to GP:15154876; match to protein family HMM PF01863; corresponds to BR2113 YP_005616913.1 identified by similarity to GP:15072953; corresponds to BR2114 YP_005616914.1 identified by match to protein family HMM PF03594; match to protein family HMM TIGR00843; corresponds to BR2115 YP_005616915.1 identified by similarity to OMNI:NTL02ML3900; corresponds to BR2116 YP_005616916.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; corresponds to BR2117 YP_005616917.1 identified by similarity to EGAD:42737; corresponds to BR2118 YP_005616918.1 identified by similarity to SP:P55874; match to protein family HMM PF01632; match to protein family HMM TIGR00001; corresponds to BR2119 YP_005616919.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; corresponds to BR2120 YP_005616920.1 identified by similarity to GP:15155150; corresponds to BR2121 YP_005616921.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; corresponds to BR2122 YP_005616922.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; corresponds to BR2123 YP_005616923.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; corresponds to BR2124 YP_005616924.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; corresponds to BR2125 YP_005616925.1 identified by similarity to EGAD:7249; match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; corresponds to BR2126 YP_005616926.1 identified by similarity to GP:9966391; corresponds to BR2127 YP_005616927.1 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; corresponds to BR2128 YP_005616928.1 identified by similarity to GP:15155195; corresponds to BR2129 YP_005616929.1 identified by similarity to OMNI:NTL02ML3653; match to protein family HMM PF03758; corresponds to BR2130 YP_005616930.1 The second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; corresponds to BR2131 YP_005616931.1 identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368; corresponds to BR2132 YP_005616932.1 identified by similarity to GP:15074346; corresponds to BR2133 YP_005616933.1 corresponds to BR2134 YP_005616934.1 identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413; corresponds to BR2135 YP_005616935.1 corresponds to BR2136 YP_005616936.1 identified by similarity to EGAD:35582; corresponds to BR2137 YP_005616937.1 corresponds to BR2138 YP_005616938.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; corresponds to BR2139 YP_005616939.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; corresponds to BR2140 YP_005616940.1 identified by similarity to GP:6531665; match to protein family HMM PF00005; match to protein family HMM TIGR00972; corresponds to BR2141 YP_005616941.1 identified by similarity to EGAD:14202; match to protein family HMM PF01895; match to protein family HMM TIGR02135; corresponds to BR2142 YP_005616942.1 identified by similarity to EGAD:5895; match to protein family HMM PF00072; match to protein family HMM PF00486; match to protein family HMM TIGR02154; corresponds to BR2143 YP_005616943.1 corresponds to BR2144 YP_005616944.1 identified by similarity to OMNI:NTL02ML4270; corresponds to BR2145 YP_005616945.1 identified by similarity to GP:15155785; corresponds to BR2146 YP_005616946.1 corresponds to BR2147 YP_005616947.1 identified by similarity to SP:Q9X4A7; match to protein family HMM PF02073; corresponds to BR2148 YP_005616948.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; corresponds to BR2149 YP_005616949.1 identified by match to protein family HMM PF00814; corresponds to BR2150 YP_005616950.1 identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; corresponds to BR2151 YP_005616951.1 identified by match to protein family HMM PF01553; corresponds to BR2152 YP_005616952.1 identified by similarity to GP:14025368; match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574; corresponds to BR2153 YP_005616953.1 corresponds to BR2154 YP_005616954.1 identified by match to protein family HMM PF02562; corresponds to BR2155 YP_005616955.1 identified by similarity to OMNI:NTL02ML4294; match to protein family HMM PF02130; match to protein family HMM TIGR00043; corresponds to BR2156 YP_005616956.1 identified by similarity to OMNI:VC0959; match to protein family HMM PF00571; match to protein family HMM PF03471; corresponds to BR2157 YP_005616957.1 Transfers the fatty acyl group on membrane lipoproteins; corresponds to BR2158 YP_005616958.1 identified by match to protein family HMM PF01381; corresponds to BR2159 YP_005616959.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; corresponds to BR2160 YP_005616960.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; corresponds to BR2161 YP_005616961.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; corresponds to BR2162 YP_005616962.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; corresponds to BR2163 YP_005616963.1 identified by similarity to GP:15073167; match to protein family HMM PF04296; corresponds to BR2164 YP_005616964.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; corresponds to BR2165 YP_005616965.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; corresponds to BR2166 YP_005616966.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; corresponds to BR2167 YP_005616967.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; corresponds to BR2168 YP_005616968.1 identified by similarity to SP:P05055; match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; corresponds to BR2169 YP_005616969.1 identified by match to protein family HMM PF05175; corresponds to BR2170 YP_005616970.1 Catalyzes a key regulatory step in fatty acid biosynthesis; corresponds to BR2171 YP_005616971.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; corresponds to BR2172 YP_005616972.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; corresponds to BR2173 YP_005616973.1 identified by match to protein family HMM PF01475; corresponds to BR2174 YP_005616974.1 identified by match to protein family HMM PF03180; match to protein family HMM TIGR00363; corresponds to BR2175 YP_005616975.1 identified by similarity to GP:14025396; corresponds to BR2176 YP_005616976.1 Involved in the metabolism of aromatic amino acids; corresponds to BR2177 YP_005616977.1 corresponds to BR2178 YP_005616978.1 identified by match to protein family HMM PF00877; corresponds to BR2179 YP_005616979.1 identified by similarity to GP:15073078; corresponds to BR2180 YP_005616980.1 identified by match to protein family HMM PF00883; corresponds to BR2181 YP_005616981.1 identified by similarity to OMNI:CC2948; corresponds to BR2182 YP_005616982.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; corresponds to BR2183 YP_005616983.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; corresponds to BR2184 YP_005616984.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; corresponds to BR2185