-- dump date 20240506_002426 -- class Genbank::Contig -- table contig_comment -- id comment NC_014375.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002102.1.REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh waterREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: AerobeREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 7REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 1 of 7REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 1 of 7 Pseudo Genes (incomplete) :: 6 of 7REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 1 of 7 Pseudo Genes (incomplete) :: 6 of 7 Pseudo Genes (internal stop) :: 0 of 7REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 1 of 7 Pseudo Genes (incomplete) :: 6 of 7 Pseudo Genes (internal stop) :: 0 of 7 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002102.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085007 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 21756 Contacts: Yves V. Brun (ybrun@indiana.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Brevundimonas subvibrioides ATCC 15264 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Fresh water num_replicons :: 1 ref_biomaterial :: ATCC 15264, DSM 4735, LMG 14903 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02053 Type Strain :: Yes Greengenes ID :: 5627 Funding Program :: DOE-CSP 2008 Cell Shape :: Rod-shaped Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:25:48 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,384 CDSs (total) :: 3,329 Genes (coding) :: 3,322 CDSs (with protein) :: 3,322 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 7 CDSs (without protein) :: 7 Pseudo Genes (ambiguous residues) :: 0 of 7 Pseudo Genes (frameshifted) :: 1 of 7 Pseudo Genes (incomplete) :: 6 of 7 Pseudo Genes (internal stop) :: 0 of 7 ##Genome-Annotation-Data-END## COMPLETENESS: full length.