-- dump date 20240506_072142 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP135917.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP135917.1.REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15xREFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 140REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 140 CDSs (without protein) :: 140REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 140 CDSs (without protein) :: 140 Pseudo Genes (ambiguous residues) :: 0 of 140REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 140 CDSs (without protein) :: 140 Pseudo Genes (ambiguous residues) :: 0 of 140 Pseudo Genes (frameshifted) :: 55 of 140REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 140 CDSs (without protein) :: 140 Pseudo Genes (ambiguous residues) :: 0 of 140 Pseudo Genes (frameshifted) :: 55 of 140 Pseudo Genes (incomplete) :: 108 of 140REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 140 CDSs (without protein) :: 140 Pseudo Genes (ambiguous residues) :: 0 of 140 Pseudo Genes (frameshifted) :: 55 of 140 Pseudo Genes (incomplete) :: 108 of 140 Pseudo Genes (internal stop) :: 29 of 140REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 140 CDSs (without protein) :: 140 Pseudo Genes (ambiguous residues) :: 0 of 140 Pseudo Genes (frameshifted) :: 55 of 140 Pseudo Genes (incomplete) :: 108 of 140 Pseudo Genes (internal stop) :: 29 of 140 Pseudo Genes (multiple problems) :: 43 of 140REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 140 CDSs (without protein) :: 140 Pseudo Genes (ambiguous residues) :: 0 of 140 Pseudo Genes (frameshifted) :: 55 of 140 Pseudo Genes (incomplete) :: 108 of 140 Pseudo Genes (internal stop) :: 29 of 140 Pseudo Genes (multiple problems) :: 43 of 140 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 140 CDSs (without protein) :: 140 Pseudo Genes (ambiguous residues) :: 0 of 140 Pseudo Genes (frameshifted) :: 55 of 140 Pseudo Genes (incomplete) :: 108 of 140 Pseudo Genes (internal stop) :: 29 of 140 Pseudo Genes (multiple problems) :: 43 of 140 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP135917.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.5.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 130.15x Sequencing Technology :: Illumina MiSeq, Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 14:42:32 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,739 CDSs (total) :: 4,632 Genes (coding) :: 4,492 CDSs (with protein) :: 4,492 Genes (RNA) :: 107 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 75 ncRNAs :: 11 Pseudo Genes (total) :: 140 CDSs (without protein) :: 140 Pseudo Genes (ambiguous residues) :: 0 of 140 Pseudo Genes (frameshifted) :: 55 of 140 Pseudo Genes (incomplete) :: 108 of 140 Pseudo Genes (internal stop) :: 29 of 140 Pseudo Genes (multiple problems) :: 43 of 140 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.